BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 041755
(678 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|3TL8|A Chain A, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|D Chain D, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|G Chain G, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|H Chain H, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
Length = 349
Score = 216 bits (549), Expect = 4e-56, Method: Compositional matrix adjust.
Identities = 111/310 (35%), Positives = 183/310 (59%), Gaps = 5/310 (1%)
Query: 312 ERYSSTCRLFSYQELLSATSNFLPEYLVGKGGHSHVYRGCLPDGKELAVKILKPSEDVLK 371
E + + FS +EL A+ NF + ++G+GG VY+G L DG +AVK LK
Sbjct: 19 EVHLGQLKRFSLRELQVASDNFSNKNILGRGGFGKVYKGRLADGTLVAVKRLKEERXQGG 78
Query: 372 E--FASEIEIITALHHRNIISLFGFCFEDNNLLLVYDFLSRGSLEENLHGNKKDGNAFGW 429
E F +E+E+I+ HRN++ L GFC LLVY +++ GS+ L + W
Sbjct: 79 ELQFQTEVEMISMAVHRNLLRLRGFCMTPTERLLVYPYMANGSVASCLRERPESQPPLDW 138
Query: 430 TERYKVAVGVAEALDYLHNSCEQPVIHKDVKSSNILLSDDFEPQLSDFGLASWLSTSSSH 489
+R ++A+G A L YLH+ C+ +IH+DVK++NILL ++FE + DFGLA + H
Sbjct: 139 PKRQRIALGSARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDXH 198
Query: 490 LTCTDVAGTFGYLAPEYFMHGKVSEKIDVYAFGIVLLELLSGKKPINSENPKGQESLVM- 548
+ V GT G++APEY GK SEK DV+ +G++LLEL++G++ + + +++
Sbjct: 199 VXXA-VRGTIGHIAPEYLSTGKSSEKTDVFGYGVMLLELITGQRAFDLARLANDDDVMLL 257
Query: 549 -WAKPILKDGKVSQLLDPSLDTDYDNDQIERMVLAATLSISRAPTVRPQINLVLKLLQGD 607
W K +LK+ K+ L+D L +Y ++++E+++ A L +P RP+++ V+++L+GD
Sbjct: 258 DWVKGLLKEKKLEALVDVDLQGNYKDEEVEQLIQVALLCTQSSPMERPKMSEVVRMLEGD 317
Query: 608 EEAANWAKEQ 617
A W + Q
Sbjct: 318 GLAERWEEWQ 327
>pdb|3UIM|A Chain A, Structural Basis For The Impact Of Phosphorylation On
Plant Receptor- Like Kinase Bak1 Activation
pdb|3ULZ|A Chain A, Crystal Structure Of Apo Bak1
Length = 326
Score = 214 bits (546), Expect = 9e-56, Method: Compositional matrix adjust.
Identities = 110/310 (35%), Positives = 182/310 (58%), Gaps = 5/310 (1%)
Query: 312 ERYSSTCRLFSYQELLSATSNFLPEYLVGKGGHSHVYRGCLPDGKELAVKILKPSEDVLK 371
E + + FS +EL A+ NF + ++G+GG VY+G L DG +AVK LK
Sbjct: 11 EVHLGQLKRFSLRELQVASDNFXNKNILGRGGFGKVYKGRLADGXLVAVKRLKEERTQGG 70
Query: 372 E--FASEIEIITALHHRNIISLFGFCFEDNNLLLVYDFLSRGSLEENLHGNKKDGNAFGW 429
E F +E+E+I+ HRN++ L GFC LLVY +++ GS+ L + W
Sbjct: 71 ELQFQTEVEMISMAVHRNLLRLRGFCMTPTERLLVYPYMANGSVASCLRERPESQPPLDW 130
Query: 430 TERYKVAVGVAEALDYLHNSCEQPVIHKDVKSSNILLSDDFEPQLSDFGLASWLSTSSSH 489
+R ++A+G A L YLH+ C+ +IH+DVK++NILL ++FE + DFGLA + H
Sbjct: 131 PKRQRIALGSARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDXH 190
Query: 490 LTCTDVAGTFGYLAPEYFMHGKVSEKIDVYAFGIVLLELLSGKKPINSENPKGQESLVM- 548
+ V G G++APEY GK SEK DV+ +G++LLEL++G++ + + +++
Sbjct: 191 VXXA-VRGXIGHIAPEYLSTGKSSEKTDVFGYGVMLLELITGQRAFDLARLANDDDVMLL 249
Query: 549 -WAKPILKDGKVSQLLDPSLDTDYDNDQIERMVLAATLSISRAPTVRPQINLVLKLLQGD 607
W K +LK+ K+ L+D L +Y ++++E+++ A L +P RP+++ V+++L+GD
Sbjct: 250 DWVKGLLKEKKLEALVDVDLQGNYKDEEVEQLIQVALLCTQSSPMERPKMSEVVRMLEGD 309
Query: 608 EEAANWAKEQ 617
A W + Q
Sbjct: 310 GLAERWEEWQ 319
>pdb|3HGK|A Chain A, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|B Chain B, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|C Chain C, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|D Chain D, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
Length = 327
Score = 172 bits (437), Expect = 5e-43, Method: Compositional matrix adjust.
Identities = 98/279 (35%), Positives = 165/279 (59%), Gaps = 6/279 (2%)
Query: 325 ELLSATSNFLPEYLVGKGGHSHVYRGCLPDGKELAVKILKP-SEDVLKEFASEIEIITAL 383
+L AT+NF ++L+G G VY+G L DG ++A+K P S ++EF +EIE ++
Sbjct: 33 DLEEATNNFDHKFLIGHGVFGKVYKGVLRDGAKVALKRRTPESSQGIEEFETEIETLSFC 92
Query: 384 HHRNIISLFGFCFEDNNLLLVYDFLSRGSLEENLHGNKKDGNAFGWTERYKVAVGVAEAL 443
H +++SL GFC E N ++L+Y ++ G+L+ +L+G+ + W +R ++ +G A L
Sbjct: 93 RHPHLVSLIGFCDERNEMILIYKYMENGNLKRHLYGSDLPTMSMSWEQRLEICIGAARGL 152
Query: 444 DYLHNSCEQPVIHKDVKSSNILLSDDFEPQLSDFGLAS-WLSTSSSHLTCTDVAGTFGYL 502
YLH + +IH+DVKS NILL ++F P+++DFG++ +HL V GT GY+
Sbjct: 153 HYLHT---RAIIHRDVKSINILLDENFVPKITDFGISKKGTELGQTHLXXV-VKGTLGYI 208
Query: 503 APEYFMHGKVSEKIDVYAFGIVLLELLSGKKPINSENPKGQESLVMWAKPILKDGKVSQL 562
PEYF+ G+++EK DVY+FG+VL E+L + I P+ +L WA +G++ Q+
Sbjct: 209 DPEYFIKGRLTEKSDVYSFGVVLFEVLCARSAIVQSLPREMVNLAEWAVESHNNGQLEQI 268
Query: 563 LDPSLDTDYDNDQIERMVLAATLSISRAPTVRPQINLVL 601
+DP+L + + + A ++ + RP + VL
Sbjct: 269 VDPNLADKIRPESLRKFGDTAVKCLALSSEDRPSMGDVL 307
>pdb|2QKW|B Chain B, Structural Basis For Activation Of Plant Immunity By
Bacterial Effector Protein Avrpto
Length = 321
Score = 172 bits (436), Expect = 5e-43, Method: Compositional matrix adjust.
Identities = 98/279 (35%), Positives = 165/279 (59%), Gaps = 6/279 (2%)
Query: 325 ELLSATSNFLPEYLVGKGGHSHVYRGCLPDGKELAVKILKP-SEDVLKEFASEIEIITAL 383
+L AT+NF ++L+G G VY+G L DG ++A+K P S ++EF +EIE ++
Sbjct: 33 DLEEATNNFDHKFLIGHGVFGKVYKGVLRDGAKVALKRRTPESSQGIEEFETEIETLSFC 92
Query: 384 HHRNIISLFGFCFEDNNLLLVYDFLSRGSLEENLHGNKKDGNAFGWTERYKVAVGVAEAL 443
H +++SL GFC E N ++L+Y ++ G+L+ +L+G+ + W +R ++ +G A L
Sbjct: 93 RHPHLVSLIGFCDERNEMILIYKYMENGNLKRHLYGSDLPTMSMSWEQRLEICIGAARGL 152
Query: 444 DYLHNSCEQPVIHKDVKSSNILLSDDFEPQLSDFGLAS-WLSTSSSHLTCTDVAGTFGYL 502
YLH + +IH+DVKS NILL ++F P+++DFG++ +HL V GT GY+
Sbjct: 153 HYLHT---RAIIHRDVKSINILLDENFVPKITDFGISKKGTELDQTHLXXV-VKGTLGYI 208
Query: 503 APEYFMHGKVSEKIDVYAFGIVLLELLSGKKPINSENPKGQESLVMWAKPILKDGKVSQL 562
PEYF+ G+++EK DVY+FG+VL E+L + I P+ +L WA +G++ Q+
Sbjct: 209 DPEYFIKGRLTEKSDVYSFGVVLFEVLCARSAIVQSLPREMVNLAEWAVESHNNGQLEQI 268
Query: 563 LDPSLDTDYDNDQIERMVLAATLSISRAPTVRPQINLVL 601
+DP+L + + + A ++ + RP + VL
Sbjct: 269 VDPNLADKIRPESLRKFGDTAVKCLALSSEDRPSMGDVL 307
>pdb|2NRY|A Chain A, Crystal Structure Of Irak-4
pdb|2NRY|B Chain B, Crystal Structure Of Irak-4
pdb|2NRY|C Chain C, Crystal Structure Of Irak-4
pdb|2NRY|D Chain D, Crystal Structure Of Irak-4
Length = 307
Score = 140 bits (354), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 99/312 (31%), Positives = 168/312 (53%), Gaps = 23/312 (7%)
Query: 305 KELEGLQERYSSTCRLFSYQELLSATSNFLPEYL------VGKGGHSHVYRGCLPDG--- 355
K LE R+ S FS+ EL + T+NF + +G+GG VY+G + +
Sbjct: 3 KSLEVSDTRFHS----FSFYELKNVTNNFDERPISVGGNKMGEGGFGVVYKGYVNNTTVA 58
Query: 356 -KELAVKILKPSEDVLKEFASEIEIITALHHRNIISLFGFCFEDNNLLLVYDFLSRGSLE 414
K+LA + +E++ ++F EI+++ H N++ L GF + ++L LVY ++ GSL
Sbjct: 59 VKKLAAMVDITTEELKQQFDQEIKVMAKCQHENLVELLGFSSDGDDLCLVYVYMPNGSLL 118
Query: 415 ENLHGNKKDGNA-FGWTERYKVAVGVAEALDYLHNSCEQPVIHKDVKSSNILLSDDFEPQ 473
+ L + DG W R K+A G A +++LH E IH+D+KS+NILL + F +
Sbjct: 119 DRL--SCLDGTPPLSWHMRCKIAQGAANGINFLH---ENHHIHRDIKSANILLDEAFTAK 173
Query: 474 LSDFGLASWLSTSSSHLTCTDVAGTFGYLAPEYFMHGKVSEKIDVYAFGIVLLELLSGKK 533
+SDFGLA + + + + GT Y+APE + G+++ K D+Y+FG+VLLE+++G
Sbjct: 174 ISDFGLARASEKFAQTVMXSRIVGTTAYMAPEA-LRGEITPKSDIYSFGVVLLEIITG-L 231
Query: 534 PINSENPKGQESLVMWAKPILKDGKVSQLLDPSLDTDYDNDQIERMVLAATLSISRAPTV 593
P E+ + Q L + + ++ + +D ++ D D+ +E M A+ +
Sbjct: 232 PAVDEHREPQLLLDIKEEIEDEEKTIEDYIDKKMN-DADSTSVEAMYSVASQCLHEKKNK 290
Query: 594 RPQINLVLKLLQ 605
RP I V +LLQ
Sbjct: 291 RPDIKKVQQLLQ 302
>pdb|2NRU|A Chain A, Crystal Structure Of Irak-4
pdb|2NRU|B Chain B, Crystal Structure Of Irak-4
pdb|2NRU|C Chain C, Crystal Structure Of Irak-4
pdb|2NRU|D Chain D, Crystal Structure Of Irak-4
Length = 307
Score = 140 bits (353), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 99/312 (31%), Positives = 167/312 (53%), Gaps = 23/312 (7%)
Query: 305 KELEGLQERYSSTCRLFSYQELLSATSNFLPEYL------VGKGGHSHVYRGCLPDG--- 355
K LE R+ S FS+ EL + T+NF + +G+GG VY+G + +
Sbjct: 3 KSLEVSDTRFHS----FSFYELKNVTNNFDERPISVGGNKMGEGGFGVVYKGYVNNTTVA 58
Query: 356 -KELAVKILKPSEDVLKEFASEIEIITALHHRNIISLFGFCFEDNNLLLVYDFLSRGSLE 414
K+LA + +E++ ++F EI+++ H N++ L GF + ++L LVY ++ GSL
Sbjct: 59 VKKLAAMVDITTEELKQQFDQEIKVMAKCQHENLVELLGFSSDGDDLCLVYVYMPNGSLL 118
Query: 415 ENLHGNKKDGNA-FGWTERYKVAVGVAEALDYLHNSCEQPVIHKDVKSSNILLSDDFEPQ 473
+ L + DG W R K+A G A +++LH E IH+D+KS+NILL + F +
Sbjct: 119 DRL--SCLDGTPPLSWHMRCKIAQGAANGINFLH---ENHHIHRDIKSANILLDEAFTAK 173
Query: 474 LSDFGLASWLSTSSSHLTCTDVAGTFGYLAPEYFMHGKVSEKIDVYAFGIVLLELLSGKK 533
+SDFGLA + + + GT Y+APE + G+++ K D+Y+FG+VLLE+++G
Sbjct: 174 ISDFGLARASEKFAQTVMXXRIVGTTAYMAPEA-LRGEITPKSDIYSFGVVLLEIITG-L 231
Query: 534 PINSENPKGQESLVMWAKPILKDGKVSQLLDPSLDTDYDNDQIERMVLAATLSISRAPTV 593
P E+ + Q L + + ++ + +D ++ D D+ +E M A+ +
Sbjct: 232 PAVDEHREPQLLLDIKEEIEDEEKTIEDYIDKKMN-DADSTSVEAMYSVASQCLHEKKNK 290
Query: 594 RPQINLVLKLLQ 605
RP I V +LLQ
Sbjct: 291 RPDIKKVQQLLQ 302
>pdb|2OIB|A Chain A, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|B Chain B, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|C Chain C, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|D Chain D, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIC|A Chain A, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|B Chain B, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|C Chain C, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|D Chain D, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OID|A Chain A, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|B Chain B, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|C Chain C, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|D Chain D, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
Length = 301
Score = 139 bits (351), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 94/296 (31%), Positives = 161/296 (54%), Gaps = 19/296 (6%)
Query: 321 FSYQELLSATSNFLPEYL------VGKGGHSHVYRGCLPDG----KELAVKILKPSEDVL 370
FS+ EL + T+NF + +G+GG VY+G + + K+LA + +E++
Sbjct: 9 FSFYELKNVTNNFDERPISVGGNKMGEGGFGVVYKGYVNNTTVAVKKLAAMVDITTEELK 68
Query: 371 KEFASEIEIITALHHRNIISLFGFCFEDNNLLLVYDFLSRGSLEENLHGNKKDGNA-FGW 429
++F EI+++ H N++ L GF + ++L LVY ++ GSL + L + DG W
Sbjct: 69 QQFDQEIKVMAKCQHENLVELLGFSSDGDDLCLVYVYMPNGSLLDRL--SCLDGTPPLSW 126
Query: 430 TERYKVAVGVAEALDYLHNSCEQPVIHKDVKSSNILLSDDFEPQLSDFGLASWLSTSSSH 489
R K+A G A +++LH E IH+D+KS+NILL + F ++SDFGLA +
Sbjct: 127 HMRCKIAQGAANGINFLH---ENHHIHRDIKSANILLDEAFTAKISDFGLARASEKFAQX 183
Query: 490 LTCTDVAGTFGYLAPEYFMHGKVSEKIDVYAFGIVLLELLSGKKPINSENPKGQESLVMW 549
+ + GT Y+APE + G+++ K D+Y+FG+VLLE+++G P E+ + Q L +
Sbjct: 184 VMXXRIVGTTAYMAPEA-LRGEITPKSDIYSFGVVLLEIITG-LPAVDEHREPQLLLDIK 241
Query: 550 AKPILKDGKVSQLLDPSLDTDYDNDQIERMVLAATLSISRAPTVRPQINLVLKLLQ 605
+ ++ + +D ++ D D+ +E M A+ + RP I V +LLQ
Sbjct: 242 EEIEDEEKTIEDYIDKKMN-DADSTSVEAMYSVASQCLHEKKNKRPDIKKVQQLLQ 296
>pdb|2O8Y|A Chain A, Apo Irak4 Kinase Domain
pdb|2O8Y|B Chain B, Apo Irak4 Kinase Domain
Length = 298
Score = 132 bits (331), Expect = 9e-31, Method: Compositional matrix adjust.
Identities = 93/296 (31%), Positives = 156/296 (52%), Gaps = 19/296 (6%)
Query: 321 FSYQELLSATSNFLPEYL------VGKGGHSHVYRGCLPDG----KELAVKILKPSEDVL 370
FS+ EL + T+NF + G+GG VY+G + + K+LA + +E++
Sbjct: 6 FSFYELKNVTNNFDERPISVGGNKXGEGGFGVVYKGYVNNTTVAVKKLAAMVDITTEELK 65
Query: 371 KEFASEIEIITALHHRNIISLFGFCFEDNNLLLVYDFLSRGSLEENLHGNKKDGNA-FGW 429
++F EI++ H N++ L GF + ++L LVY + GSL + L + DG W
Sbjct: 66 QQFDQEIKVXAKCQHENLVELLGFSSDGDDLCLVYVYXPNGSLLDRL--SCLDGTPPLSW 123
Query: 430 TERYKVAVGVAEALDYLHNSCEQPVIHKDVKSSNILLSDDFEPQLSDFGLASWLSTSSSH 489
R K+A G A +++LH E IH+D+KS+NILL + F ++SDFGLA +
Sbjct: 124 HXRCKIAQGAANGINFLH---ENHHIHRDIKSANILLDEAFTAKISDFGLARASEKFAQX 180
Query: 490 LTCTDVAGTFGYLAPEYFMHGKVSEKIDVYAFGIVLLELLSGKKPINSENPKGQESLVMW 549
+ + + GT Y APE + G+++ K D+Y+FG+VLLE+++G P E+ + Q L +
Sbjct: 181 VXXSRIVGTTAYXAPEA-LRGEITPKSDIYSFGVVLLEIITG-LPAVDEHREPQLLLDIK 238
Query: 550 AKPILKDGKVSQLLDPSLDTDYDNDQIERMVLAATLSISRAPTVRPQINLVLKLLQ 605
+ ++ + +D + D D+ +E A+ + RP I V +LLQ
Sbjct: 239 EEIEDEEKTIEDYIDKKXN-DADSTSVEAXYSVASQCLHEKKNKRPDIKKVQQLLQ 293
>pdb|3P86|A Chain A, Crystal Structure Of Ctr1 Kinase Domain Mutant D676n In
Complex With Staurosporine
pdb|3P86|B Chain B, Crystal Structure Of Ctr1 Kinase Domain Mutant D676n In
Complex With Staurosporine
Length = 309
Score = 113 bits (282), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 71/207 (34%), Positives = 116/207 (56%), Gaps = 12/207 (5%)
Query: 339 VGKGGHSHVYRGCLPDGKELAVKILKPSE---DVLKEFASEIEIITALHHRNIISLFGFC 395
+G G V+R G ++AVKIL + + + EF E+ I+ L H NI+ G
Sbjct: 45 IGAGSFGTVHRAEW-HGSDVAVKILMEQDFHAERVNEFLREVAIMKRLRHPNIVLFMGAV 103
Query: 396 FEDNNLLLVYDFLSRGSLEENLHGNKKDGNAFGWTERYKVAVG--VAEALDYLHNSCEQP 453
+ NL +V ++LSRGSL LH K G ER ++++ VA+ ++YLHN P
Sbjct: 104 TQPPNLSIVTEYLSRGSLYRLLH---KSGAREQLDERRRLSMAYDVAKGMNYLHNR-NPP 159
Query: 454 VIHKDVKSSNILLSDDFEPQLSDFGLASWLSTSSSHLTCTDVAGTFGYLAPEYFMHGKVS 513
++H+++KS N+L+ + ++ DFGL+ +S+ L+ AGT ++APE +
Sbjct: 160 IVHRNLKSPNLLVDKKYTVKVCDFGLSR--LKASTFLSSKSAAGTPEWMAPEVLRDEPSN 217
Query: 514 EKIDVYAFGIVLLELLSGKKPINSENP 540
EK DVY+FG++L EL + ++P + NP
Sbjct: 218 EKSDVYSFGVILWELATLQQPWGNLNP 244
>pdb|3PPZ|A Chain A, Crystal Structure Of Ctr1 Kinase Domain In Complex With
Staurosporine
pdb|3PPZ|B Chain B, Crystal Structure Of Ctr1 Kinase Domain In Complex With
Staurosporine
Length = 309
Score = 113 bits (282), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 72/207 (34%), Positives = 114/207 (55%), Gaps = 12/207 (5%)
Query: 339 VGKGGHSHVYRGCLPDGKELAVKILKPSE---DVLKEFASEIEIITALHHRNIISLFGFC 395
+G G V+R G ++AVKIL + + + EF E+ I+ L H NI+ G
Sbjct: 45 IGAGSFGTVHRAEW-HGSDVAVKILMEQDFHAERVNEFLREVAIMKRLRHPNIVLFMGAV 103
Query: 396 FEDNNLLLVYDFLSRGSLEENLHGNKKDGNAFGWTERYKVAVG--VAEALDYLHNSCEQP 453
+ NL +V ++LSRGSL LH K G ER ++++ VA+ ++YLHN P
Sbjct: 104 TQPPNLSIVTEYLSRGSLYRLLH---KSGAREQLDERRRLSMAYDVAKGMNYLHNR-NPP 159
Query: 454 VIHKDVKSSNILLSDDFEPQLSDFGLASWLSTSSSHLTCTDVAGTFGYLAPEYFMHGKVS 513
++H+D+KS N+L+ + ++ DFGL+ +S L AGT ++APE +
Sbjct: 160 IVHRDLKSPNLLVDKKYTVKVCDFGLSR--LKASXFLXSKXAAGTPEWMAPEVLRDEPSN 217
Query: 514 EKIDVYAFGIVLLELLSGKKPINSENP 540
EK DVY+FG++L EL + ++P + NP
Sbjct: 218 EKSDVYSFGVILWELATLQQPWGNLNP 244
>pdb|3DTC|A Chain A, Crystal Structure Of Mixed-Lineage Kinase Mlk1 Complexed
With Compound 16
Length = 271
Score = 111 bits (277), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 74/214 (34%), Positives = 111/214 (51%), Gaps = 27/214 (12%)
Query: 336 EYLVGKGGHSHVYRGCLPDGKELAVKILK--PSEDV---LKEFASEIEIITALHHRNIIS 390
E ++G GG VYR G E+AVK + P ED+ ++ E ++ L H NII+
Sbjct: 12 EEIIGIGGFGKVYRAFW-IGDEVAVKAARHDPDEDISQTIENVRQEAKLFAMLKHPNIIA 70
Query: 391 LFGFCFEDNNLLLVYDFLSRGSLEENLHGNKKDGNAF-GWTERYKVAVGVAEALDYLHNS 449
L G C ++ NL LV +F G L L G + + W AV +A ++YLH+
Sbjct: 71 LRGVCLKEPNLCLVMEFARGGPLNRVLSGKRIPPDILVNW------AVQIARGMNYLHDE 124
Query: 450 CEQPVIHKDVKSSNILLSDDFEP--------QLSDFGLA-SWLSTSSSHLTCTDVAGTFG 500
P+IH+D+KSSNIL+ E +++DFGLA W T T AG +
Sbjct: 125 AIVPIIHRDLKSSNILILQKVENGDLSNKILKITDFGLAREWHRT-----TKMSAAGAYA 179
Query: 501 YLAPEYFMHGKVSEKIDVYAFGIVLLELLSGKKP 534
++APE S+ DV+++G++L ELL+G+ P
Sbjct: 180 WMAPEVIRASMFSKGSDVWSYGVLLWELLTGEVP 213
>pdb|3OMV|A Chain A, Crystal Structure Of C-Raf (Raf-1)
pdb|3OMV|B Chain B, Crystal Structure Of C-Raf (Raf-1)
Length = 307
Score = 98.6 bits (244), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 80/275 (29%), Positives = 133/275 (48%), Gaps = 27/275 (9%)
Query: 339 VGKGGHSHVYRGCLPDGKELAVKILK---PSEDVLKEFASEIEIITALHHRNIISLFGFC 395
+G G VY+G ++AVKILK P+ + + F +E+ ++ H NI+ G+
Sbjct: 44 IGSGSFGTVYKGKWHG--DVAVKILKVVDPTPEQFQAFRNEVAVLRKTRHVNILLFMGYM 101
Query: 396 FEDNNLLLVYDFLSRGSLEENLHGNKKDGNAFGWTERYKVAVGVAEALDYLHNSCEQPVI 455
+DN L +V + SL ++LH + F + +A A+ +DYLH + +I
Sbjct: 102 TKDN-LAIVTQWCEGSSLYKHLHVQETKFQMFQLID---IARQTAQGMDYLH---AKNII 154
Query: 456 HKDVKSSNILLSDDFEPQLSDFGLASWLSTSSSHLTCTDVAGTFGYLAPEYFM---HGKV 512
H+D+KS+NI L + ++ DFGLA+ S S G+ ++APE +
Sbjct: 155 HRDMKSNNIFLHEGLTVKIGDFGLATVKSRWSGSQQVEQPTGSVLWMAPEVIRMQDNNPF 214
Query: 513 SEKIDVYAFGIVLLELLSGKKPINSENPKGQESLVMWAKPILKDGKVSQLLDPSLDTDYD 572
S + DVY++GIVL EL++G+ P + N + Q ++ G S P L Y
Sbjct: 215 SFQSDVYSYGIVLYELMTGELPYSHINNRDQIIF------MVGRGYAS----PDLSKLYK 264
Query: 573 N--DQIERMVLAATLSISRAPTVRPQINLVLKLLQ 605
N ++R+V + + PQI ++LLQ
Sbjct: 265 NCPKAMKRLVADCVKKVKEERPLFPQILSSIELLQ 299
>pdb|4E4L|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|E Chain E, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|D Chain D, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4N|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 49
pdb|4E4N|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 49
pdb|4E5W|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 26
pdb|4E5W|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 26
pdb|4EHZ|A Chain A, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|B Chain B, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|C Chain C, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|D Chain D, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EI4|A Chain A, Jak1 Kinase (jh1 Domain) In Complex With Compound 20
pdb|4EI4|B Chain B, Jak1 Kinase (jh1 Domain) In Complex With Compound 20
pdb|4FK6|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 72
pdb|4FK6|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 72
Length = 302
Score = 98.2 bits (243), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 63/182 (34%), Positives = 99/182 (54%), Gaps = 13/182 (7%)
Query: 355 GKELAVKILKPSE--DVLKEFASEIEIITALHHRNIISLFGFCFED--NNLLLVYDFLSR 410
G+++AVK LKP + + + EIEI+ L+H NI+ G C ED N + L+ +FL
Sbjct: 50 GEQVAVKSLKPESGGNHIADLKKEIEILRNLYHENIVKYKGICTEDGGNGIKLIMEFLPS 109
Query: 411 GSLEENLHGNKKDGNAFGWTERYKVAVGVAEALDYLHNSCEQPVIHKDVKSSNILLSDDF 470
GSL+E L NK N ++ K AV + + +DYL + + +H+D+ + N+L+ +
Sbjct: 110 GSLKEYLPKNK---NKINLKQQLKYAVQICKGMDYLGS---RQYVHRDLAARNVLVESEH 163
Query: 471 EPQLSDFGLASWLSTSSSHLTCTD--VAGTFGYLAPEYFMHGKVSEKIDVYAFGIVLLEL 528
+ ++ DFGL + T T D + F Y APE M K DV++FG+ L EL
Sbjct: 164 QVKIGDFGLTKAIETDKEXXTVKDDRDSPVFWY-APECLMQSKFYIASDVWSFGVTLHEL 222
Query: 529 LS 530
L+
Sbjct: 223 LT 224
>pdb|3EYG|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
pdb|3EYH|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
Length = 290
Score = 97.8 bits (242), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 63/182 (34%), Positives = 99/182 (54%), Gaps = 13/182 (7%)
Query: 355 GKELAVKILKPSE--DVLKEFASEIEIITALHHRNIISLFGFCFED--NNLLLVYDFLSR 410
G+++AVK LKP + + + EIEI+ L+H NI+ G C ED N + L+ +FL
Sbjct: 38 GEQVAVKSLKPESGGNHIADLKKEIEILRNLYHENIVKYKGICTEDGGNGIKLIMEFLPS 97
Query: 411 GSLEENLHGNKKDGNAFGWTERYKVAVGVAEALDYLHNSCEQPVIHKDVKSSNILLSDDF 470
GSL+E L NK N ++ K AV + + +DYL + + +H+D+ + N+L+ +
Sbjct: 98 GSLKEYLPKNK---NKINLKQQLKYAVQICKGMDYLGS---RQYVHRDLAARNVLVESEH 151
Query: 471 EPQLSDFGLASWLSTSSSHLTCTD--VAGTFGYLAPEYFMHGKVSEKIDVYAFGIVLLEL 528
+ ++ DFGL + T T D + F Y APE M K DV++FG+ L EL
Sbjct: 152 QVKIGDFGLTKAIETDKEXXTVKDDRDSPVFWY-APECLMQSKFYIASDVWSFGVTLHEL 210
Query: 529 LS 530
L+
Sbjct: 211 LT 212
>pdb|3II5|A Chain A, The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimidine
Inhibitor
pdb|3II5|B Chain B, The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimidine
Inhibitor
Length = 306
Score = 95.1 bits (235), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 68/211 (32%), Positives = 111/211 (52%), Gaps = 15/211 (7%)
Query: 339 VGKGGHSHVYRGCLPDGKELAVKILK---PSEDVLKEFASEIEIITALHHRNIISLFGFC 395
+G G VY+G ++AVK+L P+ L+ F +E+ ++ H NI+ G+
Sbjct: 43 IGSGSFGTVYKGKWHG--DVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYS 100
Query: 396 FEDNNLLLVYDFLSRGSLEENLHGNKKDGNAFGWTERYKVAVGVAEALDYLHNSCEQPVI 455
+ L +V + SL +LH + F + +A A+ +DYLH + +I
Sbjct: 101 TKPQ-LAIVTQWCEGSSLYHHLHIIE---TKFEMIKLIDIARQTAQGMDYLH---AKSII 153
Query: 456 HKDVKSSNILLSDDFEPQLSDFGLASWLSTSSSHLTCTDVAGTFGYLAPEYF-MHGK--V 512
H+D+KS+NI L +D ++ DFGLA+ S S ++G+ ++APE M K
Sbjct: 154 HRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPY 213
Query: 513 SEKIDVYAFGIVLLELLSGKKPINSENPKGQ 543
S + DVYAFGIVL EL++G+ P ++ N + Q
Sbjct: 214 SFQSDVYAFGIVLYELMTGQLPYSNINNRDQ 244
>pdb|3C4C|A Chain A, B-Raf Kinase In Complex With Plx4720
pdb|3C4C|B Chain B, B-Raf Kinase In Complex With Plx4720
Length = 280
Score = 94.7 bits (234), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 66/211 (31%), Positives = 109/211 (51%), Gaps = 15/211 (7%)
Query: 339 VGKGGHSHVYRGCLPDGKELAVKILK---PSEDVLKEFASEIEIITALHHRNIISLFGFC 395
+G G VY+G ++AVK+L P+ L+ F +E+ ++ H NI+ G+
Sbjct: 20 IGSGSFGTVYKGKWHG--DVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYS 77
Query: 396 FEDNNLLLVYDFLSRGSLEENLHGNKKDGNAFGWTERYKVAVGVAEALDYLHNSCEQPVI 455
+ L +V + SL +LH ++ F + +A A +DYLH + +I
Sbjct: 78 TKPQ-LAIVTQWCEGSSLYHHLHASE---TKFEMKKLIDIARQTARGMDYLH---AKSII 130
Query: 456 HKDVKSSNILLSDDFEPQLSDFGLASWLSTSSSHLTCTDVAGTFGYLAPEYFMH---GKV 512
H+D+KS+NI L +D ++ DFGLA+ S S ++G+ ++APE
Sbjct: 131 HRDLKSNNIFLHEDNTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDSNPY 190
Query: 513 SEKIDVYAFGIVLLELLSGKKPINSENPKGQ 543
S + DVYAFGIVL EL++G+ P ++ N + Q
Sbjct: 191 SFQSDVYAFGIVLYELMTGQLPYSNINNRDQ 221
>pdb|3IDP|A Chain A, B-Raf V600e Kinase Domain In Complex With An
Aminoisoquinoline Inhibitor
pdb|3IDP|B Chain B, B-Raf V600e Kinase Domain In Complex With An
Aminoisoquinoline Inhibitor
Length = 300
Score = 94.7 bits (234), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 68/211 (32%), Positives = 111/211 (52%), Gaps = 15/211 (7%)
Query: 339 VGKGGHSHVYRGCLPDGKELAVKILK---PSEDVLKEFASEIEIITALHHRNIISLFGFC 395
+G G VY+G ++AVK+L P+ L+ F +E+ ++ H NI+ G+
Sbjct: 36 IGSGSFGTVYKGKWHG--DVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYS 93
Query: 396 FEDNNLLLVYDFLSRGSLEENLHGNKKDGNAFGWTERYKVAVGVAEALDYLHNSCEQPVI 455
+ L +V + SL +LH + F + +A A+ +DYLH + +I
Sbjct: 94 TKPQ-LAIVTQWCEGSSLYHHLHIIE---TKFEMIKLIDIARQTAQGMDYLH---AKSII 146
Query: 456 HKDVKSSNILLSDDFEPQLSDFGLASWLSTSSSHLTCTDVAGTFGYLAPEYF-MHGK--V 512
H+D+KS+NI L +D ++ DFGLA+ S S ++G+ ++APE M K
Sbjct: 147 HRDLKSNNIFLHEDLTVKIGDFGLATEKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPY 206
Query: 513 SEKIDVYAFGIVLLELLSGKKPINSENPKGQ 543
S + DVYAFGIVL EL++G+ P ++ N + Q
Sbjct: 207 SFQSDVYAFGIVLYELMTGQLPYSNINNRDQ 237
>pdb|3D4Q|A Chain A, Pyrazole-Based Inhibitors Of B-Raf Kinase
pdb|3D4Q|B Chain B, Pyrazole-Based Inhibitors Of B-Raf Kinase
pdb|3PSB|A Chain A, Furo[2,3-C]pyridine-Based Indanone Oximes As Potent And
Selective B- Raf Inhibitors
pdb|3PSB|B Chain B, Furo[2,3-C]pyridine-Based Indanone Oximes As Potent And
Selective B- Raf Inhibitors
pdb|3PPJ|A Chain A, Human B-Raf Kinase In Complex With A Furopyridine
Inhibitor
pdb|3PPJ|B Chain B, Human B-Raf Kinase In Complex With A Furopyridine
Inhibitor
pdb|3PPK|A Chain A, Human B-Raf Kinase In Complex With A Non-Oxime
Furopyridine Inhibitor
pdb|3PPK|B Chain B, Human B-Raf Kinase In Complex With A Non-Oxime
Furopyridine Inhibitor
pdb|3PRF|A Chain A, Crystal Structure Of Human B-Raf Kinase Domain In Complex
With A Non- Oxime Furopyridine Inhibitor
pdb|3PRF|B Chain B, Crystal Structure Of Human B-Raf Kinase Domain In Complex
With A Non- Oxime Furopyridine Inhibitor
pdb|3PRI|A Chain A, Crystal Structure Of Human B-Raf Kinase In Complex With A
Non-Oxime Furopyridine Inhibitor
pdb|3PRI|B Chain B, Crystal Structure Of Human B-Raf Kinase In Complex With A
Non-Oxime Furopyridine Inhibitor
pdb|3Q4C|A Chain A, Crystal Structure Of Wild Type Braf Kinase Domain In
Complex With Organometallic Inhibitor Cns292
pdb|3Q4C|B Chain B, Crystal Structure Of Wild Type Braf Kinase Domain In
Complex With Organometallic Inhibitor Cns292
pdb|3PSD|A Chain A, Non-Oxime Pyrazole Based Inhibitors Of B-Raf Kinase
pdb|3PSD|B Chain B, Non-Oxime Pyrazole Based Inhibitors Of B-Raf Kinase
pdb|3SKC|A Chain A, Human B-Raf Kinase In Complex With An Amide Linked
Pyrazolopyridine Inhibitor
pdb|3SKC|B Chain B, Human B-Raf Kinase In Complex With An Amide Linked
Pyrazolopyridine Inhibitor
pdb|3TV4|A Chain A, Human B-Raf Kinase Domain In Complex With An Bromopyridine
Benzamide Inhibitor
pdb|3TV4|B Chain B, Human B-Raf Kinase Domain In Complex With An Bromopyridine
Benzamide Inhibitor
pdb|3TV6|A Chain A, Human B-Raf Kinase Domain In Complex With A
Methoxypyrazolopyridinyl Benzamide Inhibitor
pdb|3TV6|B Chain B, Human B-Raf Kinase Domain In Complex With A
Methoxypyrazolopyridinyl Benzamide Inhibitor
pdb|4E26|A Chain A, Braf In Complex With An Organic Inhibitor 7898734
pdb|4E26|B Chain B, Braf In Complex With An Organic Inhibitor 7898734
pdb|4E4X|A Chain A, Crystal Structure Of B-Raf Kinase Domain In Complex With A
Dihydropyrido[2,3-D]pyrimidinone-Based Inhibitor
pdb|4E4X|B Chain B, Crystal Structure Of B-Raf Kinase Domain In Complex With A
Dihydropyrido[2,3-D]pyrimidinone-Based Inhibitor
pdb|4G9C|A Chain A, Human B-Raf Kinase Domain Bound To A Type Ii
Pyrazolopyridine Inhibitor
pdb|4G9C|B Chain B, Human B-Raf Kinase Domain Bound To A Type Ii
Pyrazolopyridine Inhibitor
Length = 307
Score = 94.7 bits (234), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 68/211 (32%), Positives = 111/211 (52%), Gaps = 15/211 (7%)
Query: 339 VGKGGHSHVYRGCLPDGKELAVKILK---PSEDVLKEFASEIEIITALHHRNIISLFGFC 395
+G G VY+G ++AVK+L P+ L+ F +E+ ++ H NI+ G+
Sbjct: 44 IGSGSFGTVYKGKWHG--DVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYS 101
Query: 396 FEDNNLLLVYDFLSRGSLEENLHGNKKDGNAFGWTERYKVAVGVAEALDYLHNSCEQPVI 455
+ L +V + SL +LH + F + +A A+ +DYLH + +I
Sbjct: 102 TKPQ-LAIVTQWCEGSSLYHHLHIIE---TKFEMIKLIDIARQTAQGMDYLH---AKSII 154
Query: 456 HKDVKSSNILLSDDFEPQLSDFGLASWLSTSSSHLTCTDVAGTFGYLAPEYF-MHGK--V 512
H+D+KS+NI L +D ++ DFGLA+ S S ++G+ ++APE M K
Sbjct: 155 HRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPY 214
Query: 513 SEKIDVYAFGIVLLELLSGKKPINSENPKGQ 543
S + DVYAFGIVL EL++G+ P ++ N + Q
Sbjct: 215 SFQSDVYAFGIVLYELMTGQLPYSNINNRDQ 245
>pdb|4G9R|A Chain A, B-Raf V600e Kinase Domain Bound To A Type Ii
Dihydroquinazoline Inhibitor
pdb|4G9R|B Chain B, B-Raf V600e Kinase Domain Bound To A Type Ii
Dihydroquinazoline Inhibitor
Length = 307
Score = 94.7 bits (234), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 68/211 (32%), Positives = 111/211 (52%), Gaps = 15/211 (7%)
Query: 339 VGKGGHSHVYRGCLPDGKELAVKILK---PSEDVLKEFASEIEIITALHHRNIISLFGFC 395
+G G VY+G ++AVK+L P+ L+ F +E+ ++ H NI+ G+
Sbjct: 44 IGSGSFGTVYKGKWHG--DVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYS 101
Query: 396 FEDNNLLLVYDFLSRGSLEENLHGNKKDGNAFGWTERYKVAVGVAEALDYLHNSCEQPVI 455
+ L +V + SL +LH + F + +A A+ +DYLH + +I
Sbjct: 102 TKPQ-LAIVTQWCEGSSLYHHLHIIE---TKFEMIKLIDIARQTAQGMDYLH---AKSII 154
Query: 456 HKDVKSSNILLSDDFEPQLSDFGLASWLSTSSSHLTCTDVAGTFGYLAPEYF-MHGK--V 512
H+D+KS+NI L +D ++ DFGLA+ S S ++G+ ++APE M K
Sbjct: 155 HRDLKSNNIFLHEDLTVKIGDFGLATEKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPY 214
Query: 513 SEKIDVYAFGIVLLELLSGKKPINSENPKGQ 543
S + DVYAFGIVL EL++G+ P ++ N + Q
Sbjct: 215 SFQSDVYAFGIVLYELMTGQLPYSNINNRDQ 245
>pdb|4FK3|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx3203
pdb|4FK3|B Chain B, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx3203
Length = 292
Score = 94.4 bits (233), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 66/211 (31%), Positives = 109/211 (51%), Gaps = 15/211 (7%)
Query: 339 VGKGGHSHVYRGCLPDGKELAVKILK---PSEDVLKEFASEIEIITALHHRNIISLFGFC 395
+G G VY+G ++AVK+L P+ L+ F +E+ ++ H NI+ G+
Sbjct: 32 IGSGSFGTVYKGKWHG--DVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYS 89
Query: 396 FEDNNLLLVYDFLSRGSLEENLHGNKKDGNAFGWTERYKVAVGVAEALDYLHNSCEQPVI 455
+ L +V + SL +LH ++ F + +A A +DYLH + +I
Sbjct: 90 TKPQ-LAIVTQWCEGSSLYHHLHASE---TKFEMKKLIDIARQTARGMDYLH---AKSII 142
Query: 456 HKDVKSSNILLSDDFEPQLSDFGLASWLSTSSSHLTCTDVAGTFGYLAPEYFMH---GKV 512
H+D+KS+NI L +D ++ DFGLA+ S S ++G+ ++APE
Sbjct: 143 HRDLKSNNIFLHEDNTVKIGDFGLATEKSRWSGSHQFEQLSGSILWMAPEVIRMQDSNPY 202
Query: 513 SEKIDVYAFGIVLLELLSGKKPINSENPKGQ 543
S + DVYAFGIVL EL++G+ P ++ N + Q
Sbjct: 203 SFQSDVYAFGIVLYELMTGQLPYSNINNRDQ 233
>pdb|2FB8|A Chain A, Structure Of The B-Raf Kinase Domain Bound To Sb-590885
pdb|2FB8|B Chain B, Structure Of The B-Raf Kinase Domain Bound To Sb-590885
Length = 281
Score = 94.4 bits (233), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 68/211 (32%), Positives = 111/211 (52%), Gaps = 15/211 (7%)
Query: 339 VGKGGHSHVYRGCLPDGKELAVKILK---PSEDVLKEFASEIEIITALHHRNIISLFGFC 395
+G G VY+G ++AVK+L P+ L+ F +E+ ++ H NI+ G+
Sbjct: 21 IGSGSFGTVYKGKWHG--DVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYS 78
Query: 396 FEDNNLLLVYDFLSRGSLEENLHGNKKDGNAFGWTERYKVAVGVAEALDYLHNSCEQPVI 455
+ L +V + SL +LH + F + +A A+ +DYLH + +I
Sbjct: 79 TKPQ-LAIVTQWCEGSSLYHHLHIIE---TKFEMIKLIDIARQTAQGMDYLH---AKSII 131
Query: 456 HKDVKSSNILLSDDFEPQLSDFGLASWLSTSSSHLTCTDVAGTFGYLAPEYF-MHGK--V 512
H+D+KS+NI L +D ++ DFGLA+ S S ++G+ ++APE M K
Sbjct: 132 HRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPY 191
Query: 513 SEKIDVYAFGIVLLELLSGKKPINSENPKGQ 543
S + DVYAFGIVL EL++G+ P ++ N + Q
Sbjct: 192 SFQSDVYAFGIVLYELMTGQLPYSNINNRDQ 222
>pdb|3Q96|A Chain A, B-Raf Kinase Domain In Complex With A
Tetrahydronaphthalene Inhibitor
pdb|3Q96|B Chain B, B-Raf Kinase Domain In Complex With A
Tetrahydronaphthalene Inhibitor
Length = 282
Score = 94.4 bits (233), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 68/211 (32%), Positives = 111/211 (52%), Gaps = 15/211 (7%)
Query: 339 VGKGGHSHVYRGCLPDGKELAVKILK---PSEDVLKEFASEIEIITALHHRNIISLFGFC 395
+G G VY+G ++AVK+L P+ L+ F +E+ ++ H NI+ G+
Sbjct: 18 IGSGSFGTVYKGKWHG--DVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYS 75
Query: 396 FEDNNLLLVYDFLSRGSLEENLHGNKKDGNAFGWTERYKVAVGVAEALDYLHNSCEQPVI 455
+ L +V + SL +LH + F + +A A+ +DYLH + +I
Sbjct: 76 TKPQ-LAIVTQWCEGSSLYHHLHIIE---TKFEMIKLIDIARQTAQGMDYLH---AKSII 128
Query: 456 HKDVKSSNILLSDDFEPQLSDFGLASWLSTSSSHLTCTDVAGTFGYLAPEYF-MHGK--V 512
H+D+KS+NI L +D ++ DFGLA+ S S ++G+ ++APE M K
Sbjct: 129 HRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPY 188
Query: 513 SEKIDVYAFGIVLLELLSGKKPINSENPKGQ 543
S + DVYAFGIVL EL++G+ P ++ N + Q
Sbjct: 189 SFQSDVYAFGIVLYELMTGQLPYSNINNRDQ 219
>pdb|4DBN|A Chain A, Crystal Structure Of The Kinase Domain Of Human B-Raf With
A [1, 3]thiazolo[5,4-B]pyridine Derivative
pdb|4DBN|B Chain B, Crystal Structure Of The Kinase Domain Of Human B-Raf With
A [1, 3]thiazolo[5,4-B]pyridine Derivative
Length = 284
Score = 94.4 bits (233), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 68/211 (32%), Positives = 111/211 (52%), Gaps = 15/211 (7%)
Query: 339 VGKGGHSHVYRGCLPDGKELAVKILK---PSEDVLKEFASEIEIITALHHRNIISLFGFC 395
+G G VY+G ++AVK+L P+ L+ F +E+ ++ H NI+ G+
Sbjct: 21 IGSGSFGTVYKGKWHG--DVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYS 78
Query: 396 FEDNNLLLVYDFLSRGSLEENLHGNKKDGNAFGWTERYKVAVGVAEALDYLHNSCEQPVI 455
+ L +V + SL +LH + F + +A A+ +DYLH + +I
Sbjct: 79 TKPQ-LAIVTQWCEGSSLYHHLHIIE---TKFEMIKLIDIARQTAQGMDYLH---AKSII 131
Query: 456 HKDVKSSNILLSDDFEPQLSDFGLASWLSTSSSHLTCTDVAGTFGYLAPEYF-MHGK--V 512
H+D+KS+NI L +D ++ DFGLA+ S S ++G+ ++APE M K
Sbjct: 132 HRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPY 191
Query: 513 SEKIDVYAFGIVLLELLSGKKPINSENPKGQ 543
S + DVYAFGIVL EL++G+ P ++ N + Q
Sbjct: 192 SFQSDVYAFGIVLYELMTGQLPYSNINNRDQ 222
>pdb|4H58|A Chain A, Braf In Complex With Compound 3
pdb|4H58|B Chain B, Braf In Complex With Compound 3
pdb|4H58|C Chain C, Braf In Complex With Compound 3
Length = 275
Score = 94.0 bits (232), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 68/211 (32%), Positives = 111/211 (52%), Gaps = 15/211 (7%)
Query: 339 VGKGGHSHVYRGCLPDGKELAVKILK---PSEDVLKEFASEIEIITALHHRNIISLFGFC 395
+G G VY+G ++AVK+L P+ L+ F +E+ ++ H NI+ G+
Sbjct: 16 IGSGSFGTVYKGKWHG--DVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYS 73
Query: 396 FEDNNLLLVYDFLSRGSLEENLHGNKKDGNAFGWTERYKVAVGVAEALDYLHNSCEQPVI 455
+ L +V + SL +LH + F + +A A+ +DYLH + +I
Sbjct: 74 TKPQ-LAIVTQWCEGSSLYHHLHIIE---TKFEMIKLIDIARQTAQGMDYLH---AKSII 126
Query: 456 HKDVKSSNILLSDDFEPQLSDFGLASWLSTSSSHLTCTDVAGTFGYLAPEYF-MHGK--V 512
H+D+KS+NI L +D ++ DFGLA+ S S ++G+ ++APE M K
Sbjct: 127 HRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPY 186
Query: 513 SEKIDVYAFGIVLLELLSGKKPINSENPKGQ 543
S + DVYAFGIVL EL++G+ P ++ N + Q
Sbjct: 187 SFQSDVYAFGIVLYELMTGQLPYSNINNRDQ 217
>pdb|1UWJ|A Chain A, The Complex Of Mutant V599e B-raf And Bay439006
pdb|1UWJ|B Chain B, The Complex Of Mutant V599e B-raf And Bay439006
Length = 276
Score = 94.0 bits (232), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 68/211 (32%), Positives = 111/211 (52%), Gaps = 15/211 (7%)
Query: 339 VGKGGHSHVYRGCLPDGKELAVKILK---PSEDVLKEFASEIEIITALHHRNIISLFGFC 395
+G G VY+G ++AVK+L P+ L+ F +E+ ++ H NI+ G+
Sbjct: 16 IGSGSFGTVYKGKWHG--DVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYS 73
Query: 396 FEDNNLLLVYDFLSRGSLEENLHGNKKDGNAFGWTERYKVAVGVAEALDYLHNSCEQPVI 455
+ L +V + SL +LH + F + +A A+ +DYLH + +I
Sbjct: 74 TKPQ-LAIVTQWCEGSSLYHHLHIIE---TKFEMIKLIDIARQTAQGMDYLH---AKSII 126
Query: 456 HKDVKSSNILLSDDFEPQLSDFGLASWLSTSSSHLTCTDVAGTFGYLAPEYF-MHGK--V 512
H+D+KS+NI L +D ++ DFGLA+ S S ++G+ ++APE M K
Sbjct: 127 HRDLKSNNIFLHEDLTVKIGDFGLATEKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPY 186
Query: 513 SEKIDVYAFGIVLLELLSGKKPINSENPKGQ 543
S + DVYAFGIVL EL++G+ P ++ N + Q
Sbjct: 187 SFQSDVYAFGIVLYELMTGQLPYSNINNRDQ 217
>pdb|3OG7|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx4032
pdb|3OG7|B Chain B, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx4032
Length = 289
Score = 94.0 bits (232), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 66/211 (31%), Positives = 108/211 (51%), Gaps = 15/211 (7%)
Query: 339 VGKGGHSHVYRGCLPDGKELAVKILK---PSEDVLKEFASEIEIITALHHRNIISLFGFC 395
+G G VY+G ++AVK+L P+ L+ F +E+ ++ H NI+ G+
Sbjct: 32 IGSGSFGTVYKGKWHG--DVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYS 89
Query: 396 FEDNNLLLVYDFLSRGSLEENLHGNKKDGNAFGWTERYKVAVGVAEALDYLHNSCEQPVI 455
L +V + SL +LH ++ F + +A A +DYLH + +I
Sbjct: 90 TAPQ-LAIVTQWCEGSSLYHHLHASE---TKFEMKKLIDIARQTARGMDYLH---AKSII 142
Query: 456 HKDVKSSNILLSDDFEPQLSDFGLASWLSTSSSHLTCTDVAGTFGYLAPEYFMH---GKV 512
H+D+KS+NI L +D ++ DFGLA+ S S ++G+ ++APE
Sbjct: 143 HRDLKSNNIFLHEDNTVKIGDFGLATEKSRWSGSHQFEQLSGSILWMAPEVIRMQDSNPY 202
Query: 513 SEKIDVYAFGIVLLELLSGKKPINSENPKGQ 543
S + DVYAFGIVL EL++G+ P ++ N + Q
Sbjct: 203 SFQSDVYAFGIVLYELMTGQLPYSNINNRDQ 233
>pdb|1UWH|A Chain A, The Complex Of Wild Type B-Raf And Bay439006
pdb|1UWH|B Chain B, The Complex Of Wild Type B-Raf And Bay439006
Length = 276
Score = 93.6 bits (231), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 68/211 (32%), Positives = 110/211 (52%), Gaps = 15/211 (7%)
Query: 339 VGKGGHSHVYRGCLPDGKELAVKILK---PSEDVLKEFASEIEIITALHHRNIISLFGFC 395
+G G VY+G ++AVK+L P+ L+ F +E+ ++ H NI+ G+
Sbjct: 16 IGSGSFGTVYKGKWHG--DVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYS 73
Query: 396 FEDNNLLLVYDFLSRGSLEENLHGNKKDGNAFGWTERYKVAVGVAEALDYLHNSCEQPVI 455
L +V + SL +LH + F + +A A+ +DYLH + +I
Sbjct: 74 -TAPQLAIVTQWCEGSSLYHHLHIIE---TKFEMIKLIDIARQTAQGMDYLH---AKSII 126
Query: 456 HKDVKSSNILLSDDFEPQLSDFGLASWLSTSSSHLTCTDVAGTFGYLAPEYF-MHGK--V 512
H+D+KS+NI L +D ++ DFGLA+ S S ++G+ ++APE M K
Sbjct: 127 HRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPY 186
Query: 513 SEKIDVYAFGIVLLELLSGKKPINSENPKGQ 543
S + DVYAFGIVL EL++G+ P ++ N + Q
Sbjct: 187 SFQSDVYAFGIVLYELMTGQLPYSNINNRDQ 217
>pdb|4GS6|A Chain A, Irreversible Inhibition Of Tak1 Kinase By 5z-7-oxozeaenol
Length = 315
Score = 93.2 bits (230), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 78/275 (28%), Positives = 137/275 (49%), Gaps = 35/275 (12%)
Query: 336 EYLVGKGGHSHVYRGCLPDGKELAVKILKPSEDVLKEFASEIEIITALHHRNIISLFGFC 395
E +VG+G V + K++A+K ++ SE K F E+ ++ ++H NI+ L+G C
Sbjct: 14 EEVVGRGAFGVVCKAKW-RAKDVAIKQIE-SESERKAFIVELRQLSRVNHPNIVKLYGAC 71
Query: 396 FEDNNLLLVYDFLSRGSLEENLHGNKK-----DGNAFGWTERYKVAVGVAEALDYLHNSC 450
N + LV ++ GSL LHG + +A W + ++ + YLH+
Sbjct: 72 L--NPVCLVMEYAEGGSLYNVLHGAEPLPYYTAAHAMSW------CLQCSQGVAYLHSMQ 123
Query: 451 EQPVIHKDVKSSNILL-SDDFEPQLSDFGLASWLSTSSSHLTCTDVAGTFGYLAPEYFMH 509
+ +IH+D+K N+LL + ++ DFG A + T H+T + G+ ++APE F
Sbjct: 124 PKALIHRDLKPPNLLLVAGGTVLKICDFGTACDIQT---HMT--NNKGSAAWMAPEVFEG 178
Query: 510 GKVSEKIDVYAFGIVLLELLSGKKPINSENPKGQESLVMWAKPILKDGKVSQLLDPSLDT 569
SEK DV+++GI+L E+++ +KP + G +MWA V P L
Sbjct: 179 SNYSEKCDVFSWGIILWEVITRRKPFDEIG--GPAFRIMWA--------VHNGTRPPLIK 228
Query: 570 DYDNDQIERMVLAATLSISRAPTVRPQINLVLKLL 604
+ IE ++ T S+ P+ RP + ++K++
Sbjct: 229 NLPKP-IESLM---TRCWSKDPSQRPSMEEIVKIM 259
>pdb|2EVA|A Chain A, Structural Basis For The Interaction Of Tak1 Kinase With
Its Activating Protein Tab1
pdb|2YIY|A Chain A, Crystal Structure Of Compound 8 Bound To Tak1-Tab
Length = 307
Score = 92.8 bits (229), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 78/275 (28%), Positives = 137/275 (49%), Gaps = 35/275 (12%)
Query: 336 EYLVGKGGHSHVYRGCLPDGKELAVKILKPSEDVLKEFASEIEIITALHHRNIISLFGFC 395
E +VG+G V + K++A+K ++ SE K F E+ ++ ++H NI+ L+G C
Sbjct: 13 EEVVGRGAFGVVCKAKW-RAKDVAIKQIE-SESERKAFIVELRQLSRVNHPNIVKLYGAC 70
Query: 396 FEDNNLLLVYDFLSRGSLEENLHGNKK-----DGNAFGWTERYKVAVGVAEALDYLHNSC 450
N + LV ++ GSL LHG + +A W + ++ + YLH+
Sbjct: 71 L--NPVCLVMEYAEGGSLYNVLHGAEPLPYYTAAHAMSW------CLQCSQGVAYLHSMQ 122
Query: 451 EQPVIHKDVKSSNILL-SDDFEPQLSDFGLASWLSTSSSHLTCTDVAGTFGYLAPEYFMH 509
+ +IH+D+K N+LL + ++ DFG A + T H+T + G+ ++APE F
Sbjct: 123 PKALIHRDLKPPNLLLVAGGTVLKICDFGTACDIQT---HMT--NNKGSAAWMAPEVFEG 177
Query: 510 GKVSEKIDVYAFGIVLLELLSGKKPINSENPKGQESLVMWAKPILKDGKVSQLLDPSLDT 569
SEK DV+++GI+L E+++ +KP + G +MWA V P L
Sbjct: 178 SNYSEKCDVFSWGIILWEVITRRKPFDEIG--GPAFRIMWA--------VHNGTRPPLIK 227
Query: 570 DYDNDQIERMVLAATLSISRAPTVRPQINLVLKLL 604
+ IE ++ T S+ P+ RP + ++K++
Sbjct: 228 NLPKP-IESLM---TRCWSKDPSQRPSMEEIVKIM 258
>pdb|2WQM|A Chain A, Structure Of Apo Human Nek7
pdb|2WQN|A Chain A, Structure Of Adp-Bound Human Nek7
Length = 310
Score = 92.0 bits (227), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 72/279 (25%), Positives = 133/279 (47%), Gaps = 31/279 (11%)
Query: 331 SNFLPEYLVGKGGHSHVYRG-CLPDGKELAVKIL--------KPSEDVLKEFASEIEIIT 381
+NF E +G+G S VYR CL DG +A+K + K D +KE I+++
Sbjct: 32 ANFRIEKKIGRGQFSEVYRAACLLDGVPVALKKVQIFDLMDAKARADCIKE----IDLLK 87
Query: 382 ALHHRNIISLFGFCFEDNNLLLVYDFLSRGSLEENLHGNKKDGNAFGWTERYKVAVGVAE 441
L+H N+I + EDN L +V + G L + KK +K V +
Sbjct: 88 QLNHPNVIKYYASFIEDNELNIVLELADAGDLSRMIKHFKKQKRLIPERTVWKYFVQLCS 147
Query: 442 ALDYLHNSCEQPVIHKDVKSSNILLSDDFEPQLSDFGLASWLSTSSSHLTCTDVAGTFGY 501
AL+++H+ + V+H+D+K +N+ ++ +L D GL + S+ ++ + GT Y
Sbjct: 148 ALEHMHS---RRVMHRDIKPANVFITATGVVKLGDLGLGRFFSSKTT--AAHSLVGTPYY 202
Query: 502 LAPEYFMHGKVSEKIDVYAFGIVLLELLSGKKPINSENPKGQESLVMWAKPILKDGKVSQ 561
++PE + K D+++ G +L E+ + + P + + +L K K+ Q
Sbjct: 203 MSPERIHENGYNFKSDIWSLGCLLYEMAALQSPFYGD----KMNLYSLCK------KIEQ 252
Query: 562 LLDPSLDTDYDNDQIERMVLAATLSISRAPTVRPQINLV 600
P L +D+ ++++ ++V + I+ P RP + V
Sbjct: 253 CDYPPLPSDHYSEELRQLV---NMCINPDPEKRPDVTYV 288
>pdb|1SM2|A Chain A, Crystal Structure Of The Phosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SM2|B Chain B, Crystal Structure Of The Phosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNU|A Chain A, Crystal Structure Of The Unphosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNU|B Chain B, Crystal Structure Of The Unphosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNX|A Chain A, Crystal Structure Of Apo Interleukin-2 Tyrosine Kinase
Catalytic Domain
pdb|1SNX|B Chain B, Crystal Structure Of Apo Interleukin-2 Tyrosine Kinase
Catalytic Domain
Length = 264
Score = 90.1 bits (222), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 60/231 (25%), Positives = 112/231 (48%), Gaps = 12/231 (5%)
Query: 339 VGKGGHSHVYRGCLPDGKELAVKILKPSEDVLKEFASEIEIITALHHRNIISLFGFCFED 398
+G G V+ G + ++A+K ++ ++F E E++ L H ++ L+G C E
Sbjct: 13 IGSGQFGLVHLGYWLNKDKVAIKTIREGAMSEEDFIEEAEVMMKLSHPKLVQLYGVCLEQ 72
Query: 399 NNLLLVYDFLSRGSLEENLHGNKKDGNAFGWTERYKVAVGVAEALDYLHNSCEQPVIHKD 458
+ LV++F+ G L + L + F + + V E + YL +C VIH+D
Sbjct: 73 APICLVFEFMEHGCLSDYLRTQR---GLFAAETLLGMCLDVCEGMAYLEEAC---VIHRD 126
Query: 459 VKSSNILLSDDFEPQLSDFGLASWLSTSSSHLTCTDVAGTFGYLAPEYFMHGKVSEKIDV 518
+ + N L+ ++ ++SDFG+ ++ + + T + +PE F + S K DV
Sbjct: 127 LAARNCLVGENQVIKVSDFGMTRFV-LDDQYTSSTGTKFPVKWASPEVFSFSRYSSKSDV 185
Query: 519 YAFGIVLLELLS-GKKPI----NSENPKGQESLVMWAKPILKDGKVSQLLD 564
++FG+++ E+ S GK P NSE + + KP L V Q+++
Sbjct: 186 WSFGVLMWEVFSEGKIPYENRSNSEVVEDISTGFRLYKPRLASTHVYQIMN 236
>pdb|3V5J|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 090
pdb|3V5J|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 090
pdb|3V5L|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|C Chain C, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|D Chain D, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V8T|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 477
pdb|3V8T|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 477
pdb|3V8W|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 469
pdb|3V8W|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 469
Length = 266
Score = 89.7 bits (221), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 60/231 (25%), Positives = 112/231 (48%), Gaps = 12/231 (5%)
Query: 339 VGKGGHSHVYRGCLPDGKELAVKILKPSEDVLKEFASEIEIITALHHRNIISLFGFCFED 398
+G G V+ G + ++A+K ++ ++F E E++ L H ++ L+G C E
Sbjct: 15 IGSGQFGLVHLGYWLNKDKVAIKTIREGAMSEEDFIEEAEVMMKLSHPKLVQLYGVCLEQ 74
Query: 399 NNLLLVYDFLSRGSLEENLHGNKKDGNAFGWTERYKVAVGVAEALDYLHNSCEQPVIHKD 458
+ LV++F+ G L + L + F + + V E + YL +C VIH+D
Sbjct: 75 APICLVFEFMEHGCLSDYLRTQR---GLFAAETLLGMCLDVCEGMAYLEEAC---VIHRD 128
Query: 459 VKSSNILLSDDFEPQLSDFGLASWLSTSSSHLTCTDVAGTFGYLAPEYFMHGKVSEKIDV 518
+ + N L+ ++ ++SDFG+ ++ + + T + +PE F + S K DV
Sbjct: 129 LAARNCLVGENQVIKVSDFGMTRFV-LDDQYTSSTGTKFPVKWASPEVFSFSRYSSKSDV 187
Query: 519 YAFGIVLLELLS-GKKPI----NSENPKGQESLVMWAKPILKDGKVSQLLD 564
++FG+++ E+ S GK P NSE + + KP L V Q+++
Sbjct: 188 WSFGVLMWEVFSEGKIPYENRSNSEVVEDISTGFRLYKPRLASTHVYQIMN 238
>pdb|4HCT|A Chain A, Crystal Structure Of Itk In Complex With Compound 52
pdb|4HCU|A Chain A, Crystal Structure Of Itk In Complext With Compound 40
pdb|4HCV|A Chain A, Crystal Structure Of Itk In Complex With Compound 53
Length = 269
Score = 89.7 bits (221), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 60/231 (25%), Positives = 112/231 (48%), Gaps = 12/231 (5%)
Query: 339 VGKGGHSHVYRGCLPDGKELAVKILKPSEDVLKEFASEIEIITALHHRNIISLFGFCFED 398
+G G V+ G + ++A+K ++ ++F E E++ L H ++ L+G C E
Sbjct: 18 IGSGQFGLVHLGYWLNKDKVAIKTIREGAMSEEDFIEEAEVMMKLSHPKLVQLYGVCLEQ 77
Query: 399 NNLLLVYDFLSRGSLEENLHGNKKDGNAFGWTERYKVAVGVAEALDYLHNSCEQPVIHKD 458
+ LV++F+ G L + L + F + + V E + YL +C VIH+D
Sbjct: 78 APICLVFEFMEHGCLSDYLRTQR---GLFAAETLLGMCLDVCEGMAYLEEAC---VIHRD 131
Query: 459 VKSSNILLSDDFEPQLSDFGLASWLSTSSSHLTCTDVAGTFGYLAPEYFMHGKVSEKIDV 518
+ + N L+ ++ ++SDFG+ ++ + + T + +PE F + S K DV
Sbjct: 132 LAARNCLVGENQVIKVSDFGMTRFV-LDDQYTSSTGTKFPVKWASPEVFSFSRYSSKSDV 190
Query: 519 YAFGIVLLELLS-GKKPI----NSENPKGQESLVMWAKPILKDGKVSQLLD 564
++FG+++ E+ S GK P NSE + + KP L V Q+++
Sbjct: 191 WSFGVLMWEVFSEGKIPYENRSNSEVVEDISTGFRLYKPRLASTHVYQIMN 241
>pdb|3QGW|A Chain A, Crystal Structure Of Itk Kinase Bound To An Inhibitor
pdb|3QGW|B Chain B, Crystal Structure Of Itk Kinase Bound To An Inhibitor
pdb|3QGY|A Chain A, Crystal Structure Of Itk Inhibitor Complex
pdb|3QGY|B Chain B, Crystal Structure Of Itk Inhibitor Complex
Length = 286
Score = 89.7 bits (221), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 61/231 (26%), Positives = 111/231 (48%), Gaps = 12/231 (5%)
Query: 339 VGKGGHSHVYRGCLPDGKELAVKILKPSEDVLKEFASEIEIITALHHRNIISLFGFCFED 398
+G G V+ G + ++A+K +K +F E E++ L H ++ L+G C E
Sbjct: 35 IGSGQFGLVHLGYWLNKDKVAIKTIKEGSMSEDDFIEEAEVMMKLSHPKLVQLYGVCLEQ 94
Query: 399 NNLLLVYDFLSRGSLEENLHGNKKDGNAFGWTERYKVAVGVAEALDYLHNSCEQPVIHKD 458
+ LV++F+ G L + L + F + + V E + YL +C VIH+D
Sbjct: 95 APICLVFEFMEHGCLSDYLRTQR---GLFAAETLLGMCLDVCEGMAYLEEAC---VIHRD 148
Query: 459 VKSSNILLSDDFEPQLSDFGLASWLSTSSSHLTCTDVAGTFGYLAPEYFMHGKVSEKIDV 518
+ + N L+ ++ ++SDFG+ ++ + + T + +PE F + S K DV
Sbjct: 149 LAARNCLVGENQVIKVSDFGMTRFV-LDDQYTSSTGTKFPVKWASPEVFSFSRYSSKSDV 207
Query: 519 YAFGIVLLELLS-GKKPI----NSENPKGQESLVMWAKPILKDGKVSQLLD 564
++FG+++ E+ S GK P NSE + + KP L V Q+++
Sbjct: 208 WSFGVLMWEVFSEGKIPYENRSNSEVVEDISTGFRLYKPRLASTHVYQIMN 258
>pdb|4EQM|A Chain A, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|B Chain B, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|C Chain C, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|D Chain D, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|E Chain E, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|F Chain F, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
Length = 294
Score = 89.4 bits (220), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 66/211 (31%), Positives = 105/211 (49%), Gaps = 25/211 (11%)
Query: 339 VGKGGHSHVYRGCLPDGKELAVKIL--------KPSEDVLKEFASEIEIITALHHRNIIS 390
+G GG S VY L + L +K+ + E+ LK F E+ + L H+NI+S
Sbjct: 19 LGGGGMSTVY---LAEDTILNIKVAIKAIFIPPREKEETLKRFEREVHNSSQLSHQNIVS 75
Query: 391 LFGFCFEDNNLLLVYDFLSRGSLEENL--HGNKKDGNAFGWTERYKVAVGVAEALDYLHN 448
+ ED+ LV +++ +L E + HG A +T + LD + +
Sbjct: 76 MIDVDEEDDCYYLVMEYIEGPTLSEYIESHGPLSVDTAINFTN---------QILDGIKH 126
Query: 449 SCEQPVIHKDVKSSNILLSDDFEPQLSDFGLASWLSTSSSHLTCTD-VAGTFGYLAPEYF 507
+ + ++H+D+K NIL+ + ++ DFG+A LS +S LT T+ V GT Y +PE
Sbjct: 127 AHDMRIVHRDIKPQNILIDSNKTLKIFDFGIAKALSETS--LTQTNHVLGTVQYFSPEQA 184
Query: 508 MHGKVSEKIDVYAFGIVLLELLSGKKPINSE 538
E D+Y+ GIVL E+L G+ P N E
Sbjct: 185 KGEATDECTDIYSIGIVLYEMLVGEPPFNGE 215
>pdb|3T9T|A Chain A, Crystal Structure Of Btk Mutant (F435t,K596r) Complexed
With Imidazo[1,5-A]quinoxaline
Length = 267
Score = 87.8 bits (216), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 60/231 (25%), Positives = 111/231 (48%), Gaps = 12/231 (5%)
Query: 339 VGKGGHSHVYRGCLPDGKELAVKILKPSEDVLKEFASEIEIITALHHRNIISLFGFCFED 398
+G G V+ G + ++A+K ++ ++F E E++ L H ++ L+G C E
Sbjct: 16 IGSGQFGLVHLGYWLNKDKVAIKTIREGAMSEEDFIEEAEVMMKLSHPKLVQLYGVCLEQ 75
Query: 399 NNLLLVYDFLSRGSLEENLHGNKKDGNAFGWTERYKVAVGVAEALDYLHNSCEQPVIHKD 458
+ LV +F+ G L + L + F + + V E + YL +C VIH+D
Sbjct: 76 APICLVTEFMEHGCLSDYLRTQR---GLFAAETLLGMCLDVCEGMAYLEEAC---VIHRD 129
Query: 459 VKSSNILLSDDFEPQLSDFGLASWLSTSSSHLTCTDVAGTFGYLAPEYFMHGKVSEKIDV 518
+ + N L+ ++ ++SDFG+ ++ + + T + +PE F + S K DV
Sbjct: 130 LAARNCLVGENQVIKVSDFGMTRFV-LDDQYTSSTGTKFPVKWASPEVFSFSRYSSKSDV 188
Query: 519 YAFGIVLLELLS-GKKPI----NSENPKGQESLVMWAKPILKDGKVSQLLD 564
++FG+++ E+ S GK P NSE + + KP L V Q+++
Sbjct: 189 WSFGVLMWEVFSEGKIPYENRSNSEVVEDISTGFRLYKPRLASTHVYQIMN 239
>pdb|4AW5|A Chain A, Complex Of The Ephb4 Kinase Domain With An Oxindole
Inhibitor
Length = 291
Score = 87.8 bits (216), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 67/209 (32%), Positives = 108/209 (51%), Gaps = 16/209 (7%)
Query: 336 EYLVGKGGHSHVYRGCL--PDGKE--LAVKILKP--SEDVLKEFASEIEIITALHHRNII 389
E ++G G V RG L P KE +A+K LK +E +EF SE I+ H NII
Sbjct: 19 EEVIGAGEFGEVCRGRLKAPGKKESCVAIKTLKGGYTERQRREFLSEASIMGQFEHPNII 78
Query: 390 SLFGFCFEDNNLLLVYDFLSRGSLEENLHGNKKDGNAFGWTERYKVAVGVAEALDYLHNS 449
L G ++++ +F+ G+L+ L N DG F + + G+A + YL
Sbjct: 79 RLEGVVTNSMPVMILTEFMENGALDSFLRLN--DGQ-FTVIQLVGMLRGIASGMRYL--- 132
Query: 450 CEQPVIHKDVKSSNILLSDDFEPQLSDFGLASWLSTSSSHLTCTDVAG---TFGYLAPEY 506
E +H+D+ + NIL++ + ++SDFGL+ +L +SS T T G + APE
Sbjct: 133 AEMSYVHRDLAARNILVNSNLVCKVSDFGLSRFLEENSSDPTYTSSLGGKIPIRWTAPEA 192
Query: 507 FMHGKVSEKIDVYAFGIVLLELLS-GKKP 534
K + D +++GIV+ E++S G++P
Sbjct: 193 IAFRKFTSASDAWSYGIVMWEVMSFGERP 221
>pdb|2F57|A Chain A, Crystal Structure Of The Human P21-activated Kinase 5
pdb|2F57|B Chain B, Crystal Structure Of The Human P21-activated Kinase 5
Length = 317
Score = 87.8 bits (216), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 64/217 (29%), Positives = 111/217 (51%), Gaps = 13/217 (5%)
Query: 355 GKELAVKILKPSEDVLKEFA-SEIEIITALHHRNIISLFGFCFEDNNLLLVYDFLSRGSL 413
GK++AVK + + +E +E+ I+ HH N++ ++ + L +V +FL G+L
Sbjct: 70 GKQVAVKKMDLRKQQRRELLFNEVVIMRDYHHDNVVDMYSSYLVGDELWVVMEFLEGGAL 129
Query: 414 EENLHGNKKDGNAFGWTERYKVAVGVAEALDYLHNSCEQPVIHKDVKSSNILLSDDFEPQ 473
+ + + + V + V AL YLHN Q VIH+D+KS +ILL+ D +
Sbjct: 130 TDIVTHTRMNEEQIA-----TVCLSVLRALSYLHN---QGVIHRDIKSDSILLTSDGRIK 181
Query: 474 LSDFGLASWLSTSSSHLTCTDVAGTFGYLAPEYFMHGKVSEKIDVYAFGIVLLELLSGKK 533
LSDFG + +S + GT ++APE ++D+++ GI+++E++ G+
Sbjct: 182 LSDFGFCAQVSKEVP--KRKXLVGTPYWMAPEVISRLPYGTEVDIWSLGIMVIEMIDGEP 239
Query: 534 PINSENP-KGQESLVMWAKPILKD-GKVSQLLDPSLD 568
P +E P + + P +KD KVS +L LD
Sbjct: 240 PYFNEPPLQAMRRIRDSLPPRVKDLHKVSSVLRGFLD 276
>pdb|2VWU|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWV|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWW|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWX|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWY|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWZ|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VX0|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VX1|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2X9F|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2XVD|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|4BB4|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
Length = 302
Score = 87.4 bits (215), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 67/209 (32%), Positives = 108/209 (51%), Gaps = 16/209 (7%)
Query: 336 EYLVGKGGHSHVYRGCL--PDGKE--LAVKILKP--SEDVLKEFASEIEIITALHHRNII 389
E ++G G V RG L P KE +A+K LK +E +EF SE I+ H NII
Sbjct: 21 EEVIGAGEFGEVCRGRLKAPGKKESCVAIKTLKGGYTERQRREFLSEASIMGQFEHPNII 80
Query: 390 SLFGFCFEDNNLLLVYDFLSRGSLEENLHGNKKDGNAFGWTERYKVAVGVAEALDYLHNS 449
L G ++++ +F+ G+L+ L N DG F + + G+A + YL
Sbjct: 81 RLEGVVTNSMPVMILTEFMENGALDSFLRLN--DGQ-FTVIQLVGMLRGIASGMRYL--- 134
Query: 450 CEQPVIHKDVKSSNILLSDDFEPQLSDFGLASWLSTSSSHLTCTDVAG---TFGYLAPEY 506
E +H+D+ + NIL++ + ++SDFGL+ +L +SS T T G + APE
Sbjct: 135 AEMSYVHRDLAARNILVNSNLVCKVSDFGLSRFLEENSSDPTETSSLGGKIPIRWTAPEA 194
Query: 507 FMHGKVSEKIDVYAFGIVLLELLS-GKKP 534
K + D +++GIV+ E++S G++P
Sbjct: 195 IAFRKFTSASDAWSYGIVMWEVMSFGERP 223
>pdb|2VWI|A Chain A, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|B Chain B, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|C Chain C, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|D Chain D, Structure Of The Osr1 Kinase, A Hypertension Drug Target
Length = 303
Score = 87.4 bits (215), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 78/285 (27%), Positives = 136/285 (47%), Gaps = 39/285 (13%)
Query: 338 LVGKGGHSHVYRG-CLPDGKELAVKI--LKPSEDVLKEFASEIEIITALHHRNIISLFGF 394
++G G + V C P +++A+K L+ + + E EI+ ++ HH NI+S +
Sbjct: 22 VIGSGATAVVQAAYCAPKKEKVAIKRINLEKCQTSMDELLKEIQAMSQCHHPNIVSYYTS 81
Query: 395 CFEDNNLLLVYDFLSRGSLEENL-HGNKKDGNAFGWTERYKVAV---GVAEALDYLHNSC 450
+ L LV LS GS+ + + H K + G + +A V E L+YLH +
Sbjct: 82 FVVKDELWLVMKLLSGGSVLDIIKHIVAKGEHKSGVLDESTIATILREVLEGLEYLHKNG 141
Query: 451 EQPVIHKDVKSSNILLSDDFEPQLSDFGLASWLSTSSSHLTCTDVAGTF----GYLAPEY 506
+ IH+DVK+ NILL +D Q++DFG++++L+T +T V TF ++APE
Sbjct: 142 Q---IHRDVKAGNILLGEDGSVQIADFGVSAFLATGGD-ITRNKVRKTFVGTPCWMAPEV 197
Query: 507 FMHGKVSE-KIDVYAFGIVLLELLSGKKPINSENPKGQESLVMWAKPILKDGKVSQLLDP 565
+ + K D+++FGI +EL +G P + P L + P P
Sbjct: 198 MEQVRGYDFKADIWSFGITAIELATGAAPYHKYPPMKVLMLTLQNDP------------P 245
Query: 566 SLDTDYDNDQI--------ERMVLAATLSISRAPTVRPQINLVLK 602
SL+T + ++ +M+ +L + + P RP +L+
Sbjct: 246 SLETGVQDKEMLKKYGKSFRKMI---SLCLQKDPEKRPTAAELLR 287
>pdb|3DAK|A Chain A, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|B Chain B, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|C Chain C, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|D Chain D, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
Length = 290
Score = 87.0 bits (214), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 78/285 (27%), Positives = 136/285 (47%), Gaps = 39/285 (13%)
Query: 338 LVGKGGHSHVYRG-CLPDGKELAVKI--LKPSEDVLKEFASEIEIITALHHRNIISLFGF 394
++G G + V C P +++A+K L+ + + E EI+ ++ HH NI+S +
Sbjct: 17 VIGSGATAVVQAAYCAPKKEKVAIKRINLEKCQTSMDELLKEIQAMSQCHHPNIVSYYTS 76
Query: 395 CFEDNNLLLVYDFLSRGSLEENL-HGNKKDGNAFGWTERYKVAV---GVAEALDYLHNSC 450
+ L LV LS GS+ + + H K + G + +A V E L+YLH +
Sbjct: 77 FVVKDELWLVMKLLSGGSVLDIIKHIVAKGEHKSGVLDESTIATILREVLEGLEYLHKNG 136
Query: 451 EQPVIHKDVKSSNILLSDDFEPQLSDFGLASWLSTSSSHLTCTDVAGTF----GYLAPEY 506
+ IH+DVK+ NILL +D Q++DFG++++L+T +T V TF ++APE
Sbjct: 137 Q---IHRDVKAGNILLGEDGSVQIADFGVSAFLATGGD-ITRNKVRKTFVGTPCWMAPEV 192
Query: 507 FMHGKVSE-KIDVYAFGIVLLELLSGKKPINSENPKGQESLVMWAKPILKDGKVSQLLDP 565
+ + K D+++FGI +EL +G P + P L + P P
Sbjct: 193 MEQVRGYDFKADIWSFGITAIELATGAAPYHKYPPMKVLMLTLQNDP------------P 240
Query: 566 SLDTDYDNDQI--------ERMVLAATLSISRAPTVRPQINLVLK 602
SL+T + ++ +M+ +L + + P RP +L+
Sbjct: 241 SLETGVQDKEMLKKYGKSFRKMI---SLCLQKDPEKRPTAAELLR 282
>pdb|3MIY|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Sunitinib
pdb|3MIY|B Chain B, X-Ray Crystal Structure Of Itk Complexed With Sunitinib
pdb|3MJ1|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Inhibitor
Ro5191614
pdb|3MJ2|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Inhibitor
Bms-509744
Length = 266
Score = 86.7 bits (213), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 60/231 (25%), Positives = 111/231 (48%), Gaps = 12/231 (5%)
Query: 339 VGKGGHSHVYRGCLPDGKELAVKILKPSEDVLKEFASEIEIITALHHRNIISLFGFCFED 398
+G G V+ G + ++A+K ++ ++F E E++ L H ++ L+G C E
Sbjct: 15 IGSGQFGLVHLGYWLNKDKVAIKTIREGAMSEEDFIEEAEVMMKLSHPKLVQLYGVCLEQ 74
Query: 399 NNLLLVYDFLSRGSLEENLHGNKKDGNAFGWTERYKVAVGVAEALDYLHNSCEQPVIHKD 458
+ LV++F+ G L + L + F + + V E + YL E VIH+D
Sbjct: 75 APICLVFEFMEHGCLSDYLRTQR---GLFAAETLLGMCLDVCEGMAYLE---EASVIHRD 128
Query: 459 VKSSNILLSDDFEPQLSDFGLASWLSTSSSHLTCTDVAGTFGYLAPEYFMHGKVSEKIDV 518
+ + N L+ ++ ++SDFG+ ++ + + T + +PE F + S K DV
Sbjct: 129 LAARNCLVGENQVIKVSDFGMTRFV-LDDQYTSSTGTKFPVKWASPEVFSFSRYSSKSDV 187
Query: 519 YAFGIVLLELLS-GKKPI----NSENPKGQESLVMWAKPILKDGKVSQLLD 564
++FG+++ E+ S GK P NSE + + KP L V Q+++
Sbjct: 188 WSFGVLMWEVFSEGKIPYENRSNSEVVEDISTGFRLYKPRLASTHVYQIMN 238
>pdb|2BFY|A Chain A, Complex Of Aurora-B With Incenp And Hesperidin.
pdb|2BFY|B Chain B, Complex Of Aurora-B With Incenp And Hesperidin
Length = 284
Score = 86.3 bits (212), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 70/237 (29%), Positives = 112/237 (47%), Gaps = 23/237 (9%)
Query: 339 VGKGGHSHVYRGCLPDGKE-LAVKILKPS----EDVLKEFASEIEIITALHHRNIISLFG 393
+GKG +VY K +A+K+L S E V + EIEI + L H NI+ ++
Sbjct: 22 LGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQLRREIEIQSHLRHPNILRMYN 81
Query: 394 FCFEDNNLLLVYDFLSRGSLEENLHGNKKDGNAFGWTERYKVAVGVAEALDYLHNSCEQP 453
+ + + L+ +F RG L + L + G + + A + E D LH E+
Sbjct: 82 YFHDRKRIYLMLEFAPRGELYKELQKH-------GRFDEQRSATFMEELADALHYCHERK 134
Query: 454 VIHKDVKSSNILLSDDFEPQLSDFGLASWLSTSSSHLTCTDVAGTFGYLAPEYFMHGKVS 513
VIH+D+K N+L+ E +++DFG W S + L + GT YL PE
Sbjct: 135 VIHRDIKPENLLMGYKGELKIADFG---W-SVHAPSLRRRXMCGTLDYLPPEMIEGKTHD 190
Query: 514 EKIDVYAFGIVLLELLSGKKPINS----ENPKGQESLVMWAKPILKDGK---VSQLL 563
EK+D++ G++ E L G P +S E + ++ + P L DG +S+LL
Sbjct: 191 EKVDLWCAGVLCYEFLVGMPPFDSPSHTETHRRIVNVDLKFPPFLSDGSKDLISKLL 247
>pdb|3D5V|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain.
pdb|3DB8|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 041
pdb|3DBC|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 257
pdb|3DBD|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 094
Length = 317
Score = 86.3 bits (212), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 62/205 (30%), Positives = 102/205 (49%), Gaps = 14/205 (6%)
Query: 338 LVGKGGHSHVYRGCLPDGKELAVKILKPSEDVLK-----EFASEIEIITALHHRNIISLF 392
+GKGG + Y D KE+ + P +LK + ++EI I +L + +++
Sbjct: 49 FLGKGGFAKCYEITDMDTKEVFAGKVVPKSMLLKPHQKEKMSTEIAIHKSLDNPHVVGFH 108
Query: 393 GFCFEDNNLLLVYDFLSRGSLEENLHGNKKDGNAFGWTERYKVAVGVAEALDYLHNSCEQ 452
GF +D+ + +V + R SL E LH +K A E + + YLHN+
Sbjct: 109 GFFEDDDFVYVVLEICRRRSLLE-LHKRRK---AVTEPEARYFMRQTIQGVQYLHNN--- 161
Query: 453 PVIHKDVKSSNILLSDDFEPQLSDFGLASWLSTSSSHLTCTDVAGTFGYLAPEYFMHGKV 512
VIH+D+K N+ L+DD + ++ DFGLA+ + D+ GT Y+APE
Sbjct: 162 RVIHRDLKLGNLFLNDDMDVKIGDFGLATKIEFDGERK--KDLCGTPNYIAPEVLCKKGH 219
Query: 513 SEKIDVYAFGIVLLELLSGKKPINS 537
S ++D+++ G +L LL GK P +
Sbjct: 220 SFEVDIWSLGCILYTLLVGKPPFET 244
>pdb|2VRX|A Chain A, Structure Of Aurora B Kinase In Complex With Zm447439
pdb|2VRX|B Chain B, Structure Of Aurora B Kinase In Complex With Zm447439
Length = 285
Score = 86.3 bits (212), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 62/204 (30%), Positives = 98/204 (48%), Gaps = 16/204 (7%)
Query: 339 VGKGGHSHVYRGCLPDGKE-LAVKILKPS----EDVLKEFASEIEIITALHHRNIISLFG 393
+GKG +VY K +A+K+L S E V + EIEI + L H NI+ ++
Sbjct: 23 LGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQLRREIEIQSHLRHPNILRMYN 82
Query: 394 FCFEDNNLLLVYDFLSRGSLEENLHGNKKDGNAFGWTERYKVAVGVAEALDYLHNSCEQP 453
+ + + L+ +F RG L + L + G + + A + E D LH E+
Sbjct: 83 YFHDRKRIYLMLEFAPRGELYKELQKH-------GRFDEQRSATFMEELADALHYCHERK 135
Query: 454 VIHKDVKSSNILLSDDFEPQLSDFGLASWLSTSSSHLTCTDVAGTFGYLAPEYFMHGKVS 513
VIH+D+K N+L+ E +++DFG W S + L + GT YL PE
Sbjct: 136 VIHRDIKPENLLMGYKGELKIADFG---W-SVHAPSLRRRXMCGTLDYLPPEMIEGKTHD 191
Query: 514 EKIDVYAFGIVLLELLSGKKPINS 537
EK+D++ G++ E L G P +S
Sbjct: 192 EKVDLWCAGVLCYEFLVGMPPFDS 215
>pdb|3DB6|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 902
pdb|3D5X|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Wortmannin.
pdb|3DBE|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 557
pdb|3DBF|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 562
Length = 301
Score = 86.3 bits (212), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 62/205 (30%), Positives = 102/205 (49%), Gaps = 14/205 (6%)
Query: 338 LVGKGGHSHVYRGCLPDGKELAVKILKPSEDVLK-----EFASEIEIITALHHRNIISLF 392
+GKGG + Y D KE+ + P +LK + ++EI I +L + +++
Sbjct: 33 FLGKGGFAKCYEITDMDTKEVFAGKVVPKSMLLKPHQKEKMSTEIAIHKSLDNPHVVGFH 92
Query: 393 GFCFEDNNLLLVYDFLSRGSLEENLHGNKKDGNAFGWTERYKVAVGVAEALDYLHNSCEQ 452
GF +D+ + +V + R SL E LH +K A E + + YLHN+
Sbjct: 93 GFFEDDDFVYVVLEICRRRSLLE-LHKRRK---AVTEPEARYFMRQTIQGVQYLHNN--- 145
Query: 453 PVIHKDVKSSNILLSDDFEPQLSDFGLASWLSTSSSHLTCTDVAGTFGYLAPEYFMHGKV 512
VIH+D+K N+ L+DD + ++ DFGLA+ + D+ GT Y+APE
Sbjct: 146 RVIHRDLKLGNLFLNDDMDVKIGDFGLATKIEFDGERK--KDLCGTPNYIAPEVLCKKGH 203
Query: 513 SEKIDVYAFGIVLLELLSGKKPINS 537
S ++D+++ G +L LL GK P +
Sbjct: 204 SFEVDIWSLGCILYTLLVGKPPFET 228
>pdb|2BFX|A Chain A, Mechanism Of Aurora-B Activation By Incenp And Inhibition
By Hesperidin.
pdb|2BFX|B Chain B, Mechanism Of Aurora-B Activation By Incenp And Inhibition
By Hesperidin.
pdb|2VGP|A Chain A, Crystal Structure Of Aurora B Kinase In Complex With A
Aminothiazole Inhibitor
pdb|2VGP|B Chain B, Crystal Structure Of Aurora B Kinase In Complex With A
Aminothiazole Inhibitor
pdb|2VGO|A Chain A, Crystal Structure Of Aurora B Kinase In Complex With
Reversine Inhibitor
pdb|2VGO|B Chain B, Crystal Structure Of Aurora B Kinase In Complex With
Reversine Inhibitor
pdb|3ZTX|A Chain A, Aurora Kinase Selective Inhibitors Identified Using A
Taxol- Induced Checkpoint Sensitivity Screen.
pdb|3ZTX|B Chain B, Aurora Kinase Selective Inhibitors Identified Using A
Taxol- Induced Checkpoint Sensitivity Screen
Length = 284
Score = 86.3 bits (212), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 62/204 (30%), Positives = 98/204 (48%), Gaps = 16/204 (7%)
Query: 339 VGKGGHSHVYRGCLPDGKE-LAVKILKPS----EDVLKEFASEIEIITALHHRNIISLFG 393
+GKG +VY K +A+K+L S E V + EIEI + L H NI+ ++
Sbjct: 22 LGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQLRREIEIQSHLRHPNILRMYN 81
Query: 394 FCFEDNNLLLVYDFLSRGSLEENLHGNKKDGNAFGWTERYKVAVGVAEALDYLHNSCEQP 453
+ + + L+ +F RG L + L + G + + A + E D LH E+
Sbjct: 82 YFHDRKRIYLMLEFAPRGELYKELQKH-------GRFDEQRSATFMEELADALHYCHERK 134
Query: 454 VIHKDVKSSNILLSDDFEPQLSDFGLASWLSTSSSHLTCTDVAGTFGYLAPEYFMHGKVS 513
VIH+D+K N+L+ E +++DFG W S + L + GT YL PE
Sbjct: 135 VIHRDIKPENLLMGYKGELKIADFG---W-SVHAPSLRRRXMCGTLDYLPPEMIEGKTHD 190
Query: 514 EKIDVYAFGIVLLELLSGKKPINS 537
EK+D++ G++ E L G P +S
Sbjct: 191 EKVDLWCAGVLCYEFLVGMPPFDS 214
>pdb|2HAK|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|C Chain C, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|D Chain D, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|E Chain E, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|F Chain F, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|G Chain G, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|H Chain H, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
Length = 328
Score = 86.3 bits (212), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 65/229 (28%), Positives = 115/229 (50%), Gaps = 21/229 (9%)
Query: 331 SNFLPEYLVGKGGHSHV--YRGCLPDGKELAVKILKPSE---DVLKEFASEIEIITALHH 385
N+ + +GKG + V R L G+E+AVKI+ ++ L++ E+ I+ L+H
Sbjct: 15 GNYRLQKTIGKGNFAKVKLARHVLT-GREVAVKIIDKTQLNPTSLQKLFREVRIMKILNH 73
Query: 386 RNIISLFGFCFEDNNLLLVYDFLSRGSLEENL--HGNKKDGNAFGWTERYKVAVGVAEAL 443
NI+ LF + L LV ++ S G + + L HG K+ A + + A+
Sbjct: 74 PNIVKLFEVIETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARAKFRQ------IVSAV 127
Query: 444 DYLHNSCEQPVIHKDVKSSNILLSDDFEPQLSDFGLASWLSTSSSHLTCTDVAGTFGYLA 503
Y H ++ ++H+D+K+ N+LL D +++DFG ++ + + T G+ Y A
Sbjct: 128 QYCH---QKYIVHRDLKAENLLLDGDMNIKIADFGFSNEFTVGNKLDT---FCGSPPYAA 181
Query: 504 PEYFMHGKV-SEKIDVYAFGIVLLELLSGKKPINSENPKGQESLVMWAK 551
PE F K ++DV++ G++L L+SG P + +N K V+ K
Sbjct: 182 PELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGQNLKELRERVLRGK 230
>pdb|1JPA|A Chain A, Crystal Structure Of Unphosphorylated Ephb2 Receptor
Tyrosine Kinase And Juxtamembrane Region
pdb|1JPA|B Chain B, Crystal Structure Of Unphosphorylated Ephb2 Receptor
Tyrosine Kinase And Juxtamembrane Region
Length = 312
Score = 85.5 bits (210), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 63/209 (30%), Positives = 109/209 (52%), Gaps = 16/209 (7%)
Query: 336 EYLVGKGGHSHVYRGCL--PDGKEL--AVKILKP--SEDVLKEFASEIEIITALHHRNII 389
E ++G G V G L P +E+ A+K LK +E ++F SE I+ H N+I
Sbjct: 38 EQVIGAGEFGEVCSGHLKLPGKREIFVAIKTLKSGYTEKQRRDFLSEASIMGQFDHPNVI 97
Query: 390 SLFGFCFEDNNLLLVYDFLSRGSLEENLHGNKKDGNAFGWTERYKVAVGVAEALDYLHNS 449
L G + ++++ +F+ GSL+ L N DG F + + G+A + YL
Sbjct: 98 HLEGVVTKSTPVMIITEFMENGSLDSFLRQN--DGQ-FTVIQLVGMLRGIAAGMKYL--- 151
Query: 450 CEQPVIHKDVKSSNILLSDDFEPQLSDFGLASWLSTSSSHLTCTDVAG---TFGYLAPEY 506
+ +H+D+ + NIL++ + ++SDFGL+ +L +S T T G + APE
Sbjct: 152 ADMNYVHRDLAARNILVNSNLVCKVSDFGLSRFLEDDTSDPTYTSALGGKIPIRWTAPEA 211
Query: 507 FMHGKVSEKIDVYAFGIVLLELLS-GKKP 534
+ K + DV+++GIV+ E++S G++P
Sbjct: 212 IQYRKFTSASDVWSYGIVMWEVMSYGERP 240
>pdb|2R0I|A Chain A, Crystal Structure Of A Kinase Mark2PAR-1 Mutant
pdb|2R0I|B Chain B, Crystal Structure Of A Kinase Mark2PAR-1 Mutant
Length = 327
Score = 84.7 bits (208), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 65/221 (29%), Positives = 112/221 (50%), Gaps = 21/221 (9%)
Query: 339 VGKGGHSHV--YRGCLPDGKELAVKILKPSE---DVLKEFASEIEIITALHHRNIISLFG 393
+GKG + V R L GKE+AVKI+ ++ L++ E+ I+ L+H NI+ LF
Sbjct: 22 IGKGNFAKVKLARHIL-TGKEVAVKIIDKTQLNSSSLQKLFREVRIMKVLNHPNIVKLFE 80
Query: 394 FCFEDNNLLLVYDFLSRGSLEENL--HGNKKDGNAFGWTERYKVAVGVAEALDYLHNSCE 451
+ L LV ++ S G + + L HG K+ A + + A+ Y H +
Sbjct: 81 VIETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARAKFRQ------IVSAVQYCH---Q 131
Query: 452 QPVIHKDVKSSNILLSDDFEPQLSDFGLASWLSTSSSHLTCTDVAGTFGYLAPEYFMHGK 511
+ ++H+D+K+ N+LL D +++DFG ++ + + T G+ Y APE F K
Sbjct: 132 KFIVHRDLKAENLLLDADMNIKIADFGFSNEFTFGNKLDT---FCGSPPYAAPELFQGKK 188
Query: 512 V-SEKIDVYAFGIVLLELLSGKKPINSENPKGQESLVMWAK 551
++DV++ G++L L+SG P + +N K V+ K
Sbjct: 189 YDGPEVDVWSLGVILYTLVSGSLPFDGQNLKELRERVLRGK 229
>pdb|1ZMU|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Wild Type
pdb|1ZMU|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Wild Type
Length = 327
Score = 84.7 bits (208), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 65/221 (29%), Positives = 112/221 (50%), Gaps = 21/221 (9%)
Query: 339 VGKGGHSHV--YRGCLPDGKELAVKILKPSE---DVLKEFASEIEIITALHHRNIISLFG 393
+GKG + V R L GKE+AVKI+ ++ L++ E+ I+ L+H NI+ LF
Sbjct: 22 IGKGNFAKVKLARHIL-TGKEVAVKIIDKTQLNSSSLQKLFREVRIMKVLNHPNIVKLFE 80
Query: 394 FCFEDNNLLLVYDFLSRGSLEENL--HGNKKDGNAFGWTERYKVAVGVAEALDYLHNSCE 451
+ L LV ++ S G + + L HG K+ A + + A+ Y H +
Sbjct: 81 VIETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARAKFRQ------IVSAVQYCH---Q 131
Query: 452 QPVIHKDVKSSNILLSDDFEPQLSDFGLASWLSTSSSHLTCTDVAGTFGYLAPEYFMHGK 511
+ ++H+D+K+ N+LL D +++DFG ++ + + T G+ Y APE F K
Sbjct: 132 KFIVHRDLKAENLLLDADMNIKIADFGFSNEFTFGNKLDT---FCGSPPYAAPELFQGKK 188
Query: 512 V-SEKIDVYAFGIVLLELLSGKKPINSENPKGQESLVMWAK 551
++DV++ G++L L+SG P + +N K V+ K
Sbjct: 189 YDGPEVDVWSLGVILYTLVSGSLPFDGQNLKELRERVLRGK 229
>pdb|2WZJ|A Chain A, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|B Chain B, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|C Chain C, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|D Chain D, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|E Chain E, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|F Chain F, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
Length = 327
Score = 84.7 bits (208), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 63/221 (28%), Positives = 112/221 (50%), Gaps = 21/221 (9%)
Query: 339 VGKGGHSHV--YRGCLPDGKELAVKILKPSE---DVLKEFASEIEIITALHHRNIISLFG 393
+GKG + V R L GKE+AV+I+ ++ L++ E+ I+ L+H NI+ LF
Sbjct: 22 IGKGNFAKVKLARHIL-TGKEVAVRIIDKTQLNSSSLQKLFREVRIMKVLNHPNIVKLFE 80
Query: 394 FCFEDNNLLLVYDFLSRGSLEENL--HGNKKDGNAFGWTERYKVAVGVAEALDYLHNSCE 451
+ L LV ++ S G + + L HG K+ A + + A+ Y H +
Sbjct: 81 VIETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARAKFRQ------IVSAVQYCH---Q 131
Query: 452 QPVIHKDVKSSNILLSDDFEPQLSDFGLASWLSTSSSHLTCTDVAGTFGYLAPEYFMHGK 511
+ ++H+D+K+ N+LL D +++DFG ++ + + + G+ Y APE F K
Sbjct: 132 KFIVHRDLKAENLLLDADMNIKIADFGFSNEFTFGNK---LDEFCGSPPYAAPELFQGKK 188
Query: 512 V-SEKIDVYAFGIVLLELLSGKKPINSENPKGQESLVMWAK 551
++DV++ G++L L+SG P + +N K V+ K
Sbjct: 189 YDGPEVDVWSLGVILYTLVSGSLPFDGQNLKELRERVLRGK 229
>pdb|4ASZ|A Chain A, Crystal Structure Of Apo Trkb Kinase Domain
pdb|4AT3|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Cpd5n
pdb|4AT4|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Ex429
pdb|4AT5|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Gw2580
Length = 299
Score = 84.3 bits (207), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 58/213 (27%), Positives = 107/213 (50%), Gaps = 15/213 (7%)
Query: 334 LPEYLVGKGGHSHVYRGCLPDGKEL-AVKILK-PSEDVLKEFASEIEIITALHHRNIISL 391
L E GK + Y C K L AVK LK S++ K+F E E++T L H +I+
Sbjct: 21 LGEGAFGKVFLAECYNLCPEQDKILVAVKTLKDASDNARKDFHREAELLTNLQHEHIVKF 80
Query: 392 FGFCFEDNNLLLVYDFLSRGSLEENLHGNKKD------GNA---FGWTERYKVAVGVAEA 442
+G C E + L++V++++ G L + L + D GN ++ +A +A
Sbjct: 81 YGVCVEGDPLIMVFEYMKHGDLNKFLRAHGPDAVLMAEGNPPTELTQSQMLHIAQQIAAG 140
Query: 443 LDYLHNSCEQPVIHKDVKSSNILLSDDFEPQLSDFGLASWLSTSSSHLTCTDVAGTFGYL 502
+ YL Q +H+D+ + N L+ ++ ++ DFG++ + ++ + ++
Sbjct: 141 MVYL---ASQHFVHRDLATRNCLVGENLLVKIGDFGMSRDVYSTDYYRVGGHTMLPIRWM 197
Query: 503 APEYFMHGKVSEKIDVYAFGIVLLELLS-GKKP 534
PE M+ K + + DV++ G+VL E+ + GK+P
Sbjct: 198 PPESIMYRKFTTESDVWSLGVVLWEIFTYGKQP 230
>pdb|4F0F|A Chain A, Crystal Structure Of The Roco4 Kinase Domain Bound To
Appcp From D. Discoideum
pdb|4F0G|A Chain A, Crystal Structure Of The Roco4 Kinase Domain From D.
Discoideum
pdb|4F1T|A Chain A, Crystal Structure Of The Roco4 Kinase Domain From D.
Discoideum Bound To The Rock Inhibitor H1152
Length = 287
Score = 84.3 bits (207), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 65/214 (30%), Positives = 113/214 (52%), Gaps = 27/214 (12%)
Query: 339 VGKGGHSHVYRGCL-PDGKELAVK--ILKPSE------DVLKEFASEIEIITALHHRNII 389
+GKGG V++G L D +A+K IL SE + +EF E+ I++ L+H NI+
Sbjct: 27 IGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQREVFIMSNLNHPNIV 86
Query: 390 SLFGFCFEDNNLLLVYDFLSRGSLEENLHGNKKDGNAFGWTERYKVAVGVAEALDYLHNS 449
L+G N +V +F+ G L L + W+ + ++ + +A ++Y+ N
Sbjct: 87 KLYGLM--HNPPRMVMEFVPCGDLYHRL---LDKAHPIKWSVKLRLMLDIALGIEYMQNQ 141
Query: 450 CEQPVIHKDVKSSNILLS--DDFEP---QLSDFGLASWLSTSSSHLTCTDVAGTFGYLAP 504
P++H+D++S NI L D+ P +++DFG LS S H + + + G F ++AP
Sbjct: 142 -NPPIVHRDLRSPNIFLQSLDENAPVCAKVADFG----LSQQSVH-SVSGLLGNFQWMAP 195
Query: 505 EYFMHGKVS--EKIDVYAFGIVLLELLSGKKPIN 536
E + S EK D Y+F ++L +L+G+ P +
Sbjct: 196 ETIGAEEESYTEKADTYSFAMILYTILTGEGPFD 229
>pdb|3V5Q|A Chain A, Discovery Of A Selective Trk Inhibitor With Efficacy In
Rodent Cancer Tumor Models
pdb|3V5Q|B Chain B, Discovery Of A Selective Trk Inhibitor With Efficacy In
Rodent Cancer Tumor Models
Length = 297
Score = 84.3 bits (207), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 49/195 (25%), Positives = 98/195 (50%), Gaps = 17/195 (8%)
Query: 354 DGKELAVKILK-PSEDVLKEFASEIEIITALHHRNIISLFGFCFEDNNLLLVYDFLSRGS 412
D +AVK LK P+ K+F E E++T L H +I+ +G C + + L++V++++ G
Sbjct: 44 DKMLVAVKALKDPTLAARKDFQREAELLTNLQHEHIVKFYGVCGDGDPLIMVFEYMKHGD 103
Query: 413 LEENLHGNKKDG------------NAFGWTERYKVAVGVAEALDYLHNSCEQPVIHKDVK 460
L + L + D G ++ +A +A + YL Q +H+D+
Sbjct: 104 LNKFLRAHGPDAMILVDGQPRQAKGELGLSQMLHIASQIASGMVYL---ASQHFVHRDLA 160
Query: 461 SSNILLSDDFEPQLSDFGLASWLSTSSSHLTCTDVAGTFGYLAPEYFMHGKVSEKIDVYA 520
+ N L+ + ++ DFG++ + ++ + ++ PE M+ K + + DV++
Sbjct: 161 TRNCLVGANLLVKIGDFGMSRDVYSTDYYRVGGHTMLPIRWMPPESIMYRKFTTESDVWS 220
Query: 521 FGIVLLELLS-GKKP 534
FG++L E+ + GK+P
Sbjct: 221 FGVILWEIFTYGKQP 235
>pdb|4GT5|A Chain A, Crystal Structure Of The Inactive Trka Kinase Domain
Length = 306
Score = 84.0 bits (206), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 57/215 (26%), Positives = 103/215 (47%), Gaps = 22/215 (10%)
Query: 339 VGKGGHSHVY----RGCLPDGKEL--AVKILK-PSEDVLKEFASEIEIITALHHRNIISL 391
+G+G V+ LP+ ++ AVK LK SE ++F E E++T L H++I+
Sbjct: 26 LGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQREAELLTMLQHQHIVRF 85
Query: 392 FGFCFEDNNLLLVYDFLSRGSLEENLHGNKKDG-----------NAFGWTERYKVAVGVA 440
FG C E LL+V++++ G L L + D G + VA VA
Sbjct: 86 FGVCTEGRPLLMVFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAVASQVA 145
Query: 441 EALDYLHNSCEQPVIHKDVKSSNILLSDDFEPQLSDFGLASWLSTSSSHLTCTDVAGTFG 500
+ YL +H+D+ + N L+ ++ DFG++ + ++ +
Sbjct: 146 AGMVYLAGL---HFVHRDLATRNCLVGQGLVVKIGDFGMSRDIYSTDYYRVGGRTMLPIR 202
Query: 501 YLAPEYFMHGKVSEKIDVYAFGIVLLELLS-GKKP 534
++ PE ++ K + + DV++FG+VL E+ + GK+P
Sbjct: 203 WMPPESILYRKFTTESDVWSFGVVLWEIFTYGKQP 237
>pdb|1ZMW|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
T208aS212A INACTIVE DOUBLE MUTANT
pdb|1ZMW|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
T208aS212A INACTIVE DOUBLE MUTANT
Length = 327
Score = 84.0 bits (206), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 64/221 (28%), Positives = 110/221 (49%), Gaps = 21/221 (9%)
Query: 339 VGKGGHSHV--YRGCLPDGKELAVKILKPSE---DVLKEFASEIEIITALHHRNIISLFG 393
+GKG + V R L GKE+AVKI+ ++ L++ E+ I+ L+H NI+ LF
Sbjct: 22 IGKGNFAKVKLARHIL-TGKEVAVKIIDKTQLNSSSLQKLFREVRIMKVLNHPNIVKLFE 80
Query: 394 FCFEDNNLLLVYDFLSRGSLEENL--HGNKKDGNAFGWTERYKVAVGVAEALDYLHNSCE 451
+ L LV ++ S G + + L HG K+ A + + A+ Y H +
Sbjct: 81 VIETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARAKFRQ------IVSAVQYCH---Q 131
Query: 452 QPVIHKDVKSSNILLSDDFEPQLSDFGLASWLSTSSSHLTCTDVAGTFGYLAPEYFMHGK 511
+ ++H+D+K+ N+LL D +++DFG ++ + + G Y APE F K
Sbjct: 132 KFIVHRDLKAENLLLDADMNIKIADFGFSNEFTFGNK---LDAFCGAPPYAAPELFQGKK 188
Query: 512 V-SEKIDVYAFGIVLLELLSGKKPINSENPKGQESLVMWAK 551
++DV++ G++L L+SG P + +N K V+ K
Sbjct: 189 YDGPEVDVWSLGVILYTLVSGSLPFDGQNLKELRERVLRGK 229
>pdb|4F0I|A Chain A, Crystal Structure Of Apo Trka
pdb|4F0I|B Chain B, Crystal Structure Of Apo Trka
Length = 300
Score = 84.0 bits (206), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 53/194 (27%), Positives = 94/194 (48%), Gaps = 16/194 (8%)
Query: 354 DGKELAVKILK-PSEDVLKEFASEIEIITALHHRNIISLFGFCFEDNNLLLVYDFLSRGS 412
D +AVK LK SE ++F E E++T L H++I+ FG C E LL+V++++ G
Sbjct: 41 DKMLVAVKALKEASESARQDFQREAELLTMLQHQHIVRFFGVCTEGRPLLMVFEYMRHGD 100
Query: 413 LEENLHGNKKDG-----------NAFGWTERYKVAVGVAEALDYLHNSCEQPVIHKDVKS 461
L L + D G + VA VA + YL +H+D+ +
Sbjct: 101 LNRFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAVASQVAAGMVYLAGL---HFVHRDLAT 157
Query: 462 SNILLSDDFEPQLSDFGLASWLSTSSSHLTCTDVAGTFGYLAPEYFMHGKVSEKIDVYAF 521
N L+ ++ DFG++ + ++ + ++ PE ++ K + + DV++F
Sbjct: 158 RNCLVGQGLVVKIGDFGMSRDIYSTDYYRVGGRTMLPIRWMPPESILYRKFTTESDVWSF 217
Query: 522 GIVLLELLS-GKKP 534
G+VL E+ + GK+P
Sbjct: 218 GVVLWEIFTYGKQP 231
>pdb|4AOJ|A Chain A, Human Trka In Complex With The Inhibitor Az-23
pdb|4AOJ|B Chain B, Human Trka In Complex With The Inhibitor Az-23
pdb|4AOJ|C Chain C, Human Trka In Complex With The Inhibitor Az-23
Length = 329
Score = 84.0 bits (206), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 52/190 (27%), Positives = 93/190 (48%), Gaps = 16/190 (8%)
Query: 358 LAVKILK-PSEDVLKEFASEIEIITALHHRNIISLFGFCFEDNNLLLVYDFLSRGSLEEN 416
+AVK LK SE ++F E E++T L H++I+ FG C E LL+V++++ G L
Sbjct: 74 VAVKALKEASESARQDFQREAELLTMLQHQHIVRFFGVCTEGRPLLMVFEYMRHGDLNRF 133
Query: 417 LHGNKKDG-----------NAFGWTERYKVAVGVAEALDYLHNSCEQPVIHKDVKSSNIL 465
L + D G + VA VA + YL +H+D+ + N L
Sbjct: 134 LRSHGPDAKLLAGGEDVAPGPLGLGQLLAVASQVAAGMVYLAGL---HFVHRDLATRNCL 190
Query: 466 LSDDFEPQLSDFGLASWLSTSSSHLTCTDVAGTFGYLAPEYFMHGKVSEKIDVYAFGIVL 525
+ ++ DFG++ + ++ + ++ PE ++ K + + DV++FG+VL
Sbjct: 191 VGQGLVVKIGDFGMSRDIYSTDYYRVGGRTMLPIRWMPPESILYRKFTTESDVWSFGVVL 250
Query: 526 LELLS-GKKP 534
E+ + GK+P
Sbjct: 251 WEIFTYGKQP 260
>pdb|1ZMV|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
K82r Mutant
pdb|1ZMV|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
K82r Mutant
Length = 327
Score = 84.0 bits (206), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 64/221 (28%), Positives = 112/221 (50%), Gaps = 21/221 (9%)
Query: 339 VGKGGHSHV--YRGCLPDGKELAVKILKPSE---DVLKEFASEIEIITALHHRNIISLFG 393
+GKG + V R L GKE+AV+I+ ++ L++ E+ I+ L+H NI+ LF
Sbjct: 22 IGKGNFAKVKLARHIL-TGKEVAVRIIDKTQLNSSSLQKLFREVRIMKVLNHPNIVKLFE 80
Query: 394 FCFEDNNLLLVYDFLSRGSLEENL--HGNKKDGNAFGWTERYKVAVGVAEALDYLHNSCE 451
+ L LV ++ S G + + L HG K+ A + + A+ Y H +
Sbjct: 81 VIETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARAKFRQ------IVSAVQYCH---Q 131
Query: 452 QPVIHKDVKSSNILLSDDFEPQLSDFGLASWLSTSSSHLTCTDVAGTFGYLAPEYFMHGK 511
+ ++H+D+K+ N+LL D +++DFG ++ + + T G+ Y APE F K
Sbjct: 132 KFIVHRDLKAENLLLDADMNIKIADFGFSNEFTFGNKLDT---FCGSPPYAAPELFQGKK 188
Query: 512 V-SEKIDVYAFGIVLLELLSGKKPINSENPKGQESLVMWAK 551
++DV++ G++L L+SG P + +N K V+ K
Sbjct: 189 YDGPEVDVWSLGVILYTLVSGSLPFDGQNLKELRERVLRGK 229
>pdb|3ORX|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|B Chain B, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|C Chain C, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|D Chain D, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|E Chain E, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|F Chain F, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|G Chain G, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|H Chain H, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORZ|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|B Chain B, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|C Chain C, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|D Chain D, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3OTU|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator Js30
Length = 316
Score = 84.0 bits (206), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 64/208 (30%), Positives = 104/208 (50%), Gaps = 14/208 (6%)
Query: 338 LVGKGGHSHVYRGC-LPDGKELAVKILKPSEDVLKE-----FASEIEIITALHHRNIISL 391
++G+G S V L +E A+KIL+ ++KE E ++++ L H + L
Sbjct: 44 ILGEGSFSTVVLARELATSREYAIKILE-KRHIIKENKVPYVTRERDVMSRLDHPFFVKL 102
Query: 392 FGFCFEDNNLLLVYDFLSRGSLEENLHGNKKDGNAFGWTERYKVAVGVAEALDYLHNSCE 451
+ FCF+D+ L Y LS E L +K G+ R+ A + AL+YLH
Sbjct: 103 Y-FCFQDDEKL--YFGLSYAKNGELLKYIRKIGSFDETCTRFYTA-EIVSALEYLHG--- 155
Query: 452 QPVIHKDVKSSNILLSDDFEPQLSDFGLASWLSTSSSHLTCTDVAGTFGYLAPEYFMHGK 511
+ +IH+D+K NILL++D Q++DFG A LS S GT Y++PE
Sbjct: 156 KGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKS 215
Query: 512 VSEKIDVYAFGIVLLELLSGKKPINSEN 539
+ D++A G ++ +L++G P + N
Sbjct: 216 ACKSSDLWALGCIIYQLVAGLPPFRAGN 243
>pdb|3D5U|A Chain A, Crystal Structure Of A Wildtype Polo-Like Kinase 1 (Plk1)
Catalytic Domain
Length = 317
Score = 84.0 bits (206), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 61/205 (29%), Positives = 101/205 (49%), Gaps = 14/205 (6%)
Query: 338 LVGKGGHSHVYRGCLPDGKELAVKILKPSEDVLK-----EFASEIEIITALHHRNIISLF 392
+GKGG + Y D KE+ + P +LK + ++EI I +L + +++
Sbjct: 49 FLGKGGFAKCYEITDMDTKEVFAGKVVPKSMLLKPHQKEKMSTEIAIHKSLDNPHVVGFH 108
Query: 393 GFCFEDNNLLLVYDFLSRGSLEENLHGNKKDGNAFGWTERYKVAVGVAEALDYLHNSCEQ 452
GF +D+ + +V + R SL E LH +K A E + + YLHN+
Sbjct: 109 GFFEDDDFVYVVLEICRRRSLLE-LHKRRK---AVTEPEARYFMRQTIQGVQYLHNN--- 161
Query: 453 PVIHKDVKSSNILLSDDFEPQLSDFGLASWLSTSSSHLTCTDVAGTFGYLAPEYFMHGKV 512
VIH+D+K N+ L+DD + ++ DFGLA+ + + GT Y+APE
Sbjct: 162 RVIHRDLKLGNLFLNDDMDVKIGDFGLATKIEFDGERKKT--LCGTPNYIAPEVLCKKGH 219
Query: 513 SEKIDVYAFGIVLLELLSGKKPINS 537
S ++D+++ G +L LL GK P +
Sbjct: 220 SFEVDIWSLGCILYTLLVGKPPFET 244
>pdb|1YHV|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Two Point
Mutations (K299r, T423e)
pdb|2HY8|1 Chain 1, Pak1 Complex With St2001
Length = 297
Score = 84.0 bits (206), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 56/204 (27%), Positives = 105/204 (51%), Gaps = 12/204 (5%)
Query: 339 VGKGGHSHVYRGC-LPDGKELAVKILKPSEDVLKEFA-SEIEIITALHHRNIISLFGFCF 396
+G+G VY + G+E+A++ + + KE +EI ++ + NI++
Sbjct: 28 IGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVNYLDSYL 87
Query: 397 EDNNLLLVYDFLSRGSLEENLHGNKKDGNAFGWTERYKVAVGVAEALDYLHNSCEQPVIH 456
+ L +V ++L+ GSL + + D V +AL++LH++ VIH
Sbjct: 88 VGDELWVVMEYLAGGSLTDVVTETCMDEGQIA-----AVCRECLQALEFLHSN---QVIH 139
Query: 457 KDVKSSNILLSDDFEPQLSDFGLASWLSTSSSHLTCTDVAGTFGYLAPEYFMHGKVSEKI 516
+D+KS NILL D +L+DFG + ++ S + ++ GT ++APE K+
Sbjct: 140 RDIKSDNILLGMDGSVKLTDFGFCAQITPEQSKRS--EMVGTPYWMAPEVVTRKAYGPKV 197
Query: 517 DVYAFGIVLLELLSGKKPINSENP 540
D+++ GI+ +E++ G+ P +ENP
Sbjct: 198 DIWSLGIMAIEMIEGEPPYLNENP 221
>pdb|2X7F|A Chain A, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|B Chain B, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|C Chain C, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|D Chain D, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|E Chain E, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
Length = 326
Score = 83.6 bits (205), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 73/277 (26%), Positives = 130/277 (46%), Gaps = 28/277 (10%)
Query: 338 LVGKGGHSHVYRG-CLPDGKELAVKILKPSEDVLKEFASEIEIITAL-HHRNIISLFGFC 395
LVG G + VY+G + G+ A+K++ + D +E EI ++ HHRNI + +G
Sbjct: 31 LVGNGTYGQVYKGRHVKTGQLAAIKVMDVTGDEEEEIKQEINMLKKYSHHRNIATYYGAF 90
Query: 396 FE------DNNLLLVYDFLSRGSLEENLHGNKKDGNAFGWTERYKVAVGVAEALDYLHNS 449
+ D+ L LV +F GS+ + + K GN + + L +LH
Sbjct: 91 IKKNPPGMDDQLWLVMEFCGAGSVTDLIKNTK--GNTLKEEWIAYICREILRGLSHLH-- 146
Query: 450 CEQPVIHKDVKSSNILLSDDFEPQLSDFGLASWLSTSSSHLTCTDVAGTFGYLAPEYFMH 509
+ VIH+D+K N+LL+++ E +L DFG+++ L + GT ++APE
Sbjct: 147 -QHKVIHRDIKGQNVLLTENAEVKLVDFGVSAQLDRTVGRRNT--FIGTPYWMAPEVIAC 203
Query: 510 GKVSE-----KIDVYAFGIVLLELLSGKKPINSENPKGQESLVMWAK---PILKDGKVSQ 561
+ + K D+++ GI +E+ G P+ +P +L + + P LK K S+
Sbjct: 204 DENPDATYDFKSDLWSLGITAIEMAEGAPPLCDMHP--MRALFLIPRNPAPRLKSKKWSK 261
Query: 562 LLDPSLDTDYDNDQIERMVLAATLSISRAPTVRPQIN 598
+++ + +R AT + + P +R Q N
Sbjct: 262 KFQSFIESCLVKNHSQR---PATEQLMKHPFIRDQPN 295
>pdb|3D5W|A Chain A, Crystal Structure Of A Phosphorylated Polo-Like Kinase 1
(Plk1) Catalytic Domain In Complex With Adp
Length = 317
Score = 83.6 bits (205), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 61/205 (29%), Positives = 101/205 (49%), Gaps = 14/205 (6%)
Query: 338 LVGKGGHSHVYRGCLPDGKELAVKILKPSEDVLK-----EFASEIEIITALHHRNIISLF 392
+GKGG + Y D KE+ + P +LK + ++EI I +L + +++
Sbjct: 49 FLGKGGFAKCYEITDMDTKEVFAGKVVPKSMLLKPHQKEKMSTEIAIHKSLDNPHVVGFH 108
Query: 393 GFCFEDNNLLLVYDFLSRGSLEENLHGNKKDGNAFGWTERYKVAVGVAEALDYLHNSCEQ 452
GF +D+ + +V + R SL E LH +K A E + + YLHN+
Sbjct: 109 GFFEDDDFVYVVLEICRRRSLLE-LHKRRK---AVTEPEARYFMRQTIQGVQYLHNN--- 161
Query: 453 PVIHKDVKSSNILLSDDFEPQLSDFGLASWLSTSSSHLTCTDVAGTFGYLAPEYFMHGKV 512
VIH+D+K N+ L+DD + ++ DFGLA+ + + GT Y+APE
Sbjct: 162 RVIHRDLKLGNLFLNDDMDVKIGDFGLATKIEFDGERK--KXLCGTPNYIAPEVLCKKGH 219
Query: 513 SEKIDVYAFGIVLLELLSGKKPINS 537
S ++D+++ G +L LL GK P +
Sbjct: 220 SFEVDIWSLGCILYTLLVGKPPFET 244
>pdb|2QNJ|A Chain A, Kinase And Ubiquitin-Associated Domains Of Mark3PAR-1
pdb|2QNJ|B Chain B, Kinase And Ubiquitin-Associated Domains Of Mark3PAR-1
Length = 328
Score = 83.6 bits (205), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 64/221 (28%), Positives = 112/221 (50%), Gaps = 21/221 (9%)
Query: 339 VGKGGHSHV--YRGCLPDGKELAVKILKPSE---DVLKEFASEIEIITALHHRNIISLFG 393
+GKG + V R L G+E+A+KI+ ++ L++ E+ I+ L+H NI+ LF
Sbjct: 20 IGKGNFAKVKLARHILT-GREVAIKIIDKTQLNPTSLQKLFREVRIMKILNHPNIVKLFE 78
Query: 394 FCFEDNNLLLVYDFLSRGSLEENL--HGNKKDGNAFGWTERYKVAVGVAEALDYLHNSCE 451
+ L L+ ++ S G + + L HG K+ A R K + A+ Y H +
Sbjct: 79 VIETEKTLYLIMEYASGGEVFDYLVAHGRMKEKEA-----RSKFR-QIVSAVQYCH---Q 129
Query: 452 QPVIHKDVKSSNILLSDDFEPQLSDFGLASWLSTSSSHLTCTDVAGTFGYLAPEYFMHGK 511
+ ++H+D+K+ N+LL D +++DFG ++ + T G+ Y APE F K
Sbjct: 130 KRIVHRDLKAENLLLDADMNIKIADFGFSNEFTVGGKLDT---FCGSPPYAAPELFQGKK 186
Query: 512 V-SEKIDVYAFGIVLLELLSGKKPINSENPKGQESLVMWAK 551
++DV++ G++L L+SG P + +N K V+ K
Sbjct: 187 YDGPEVDVWSLGVILYTLVSGSLPFDGQNLKELRERVLRGK 227
>pdb|2WTW|A Chain A, Aurora-A Inhibitor Structure (2nd Crystal Form)
Length = 285
Score = 83.2 bits (204), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 60/204 (29%), Positives = 98/204 (48%), Gaps = 16/204 (7%)
Query: 339 VGKGGHSHVYRGCLPDGKE-LAVKILKPSE----DVLKEFASEIEIITALHHRNIISLFG 393
+GKG +VY K LA+K+L ++ V + E+EI + L H NI+ L+G
Sbjct: 21 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 80
Query: 394 FCFEDNNLLLVYDFLSRGSLEENLHGNKKDGNAFGWTERYKVAVGVAEALDYLHNSCEQP 453
+ + + L+ ++ RG + + L K F +A AL Y H+ +
Sbjct: 81 YFHDATRVYLILEYAPRGEVYKELQKLSK----FDEQRTATYITELANALSYCHS---KR 133
Query: 454 VIHKDVKSSNILLSDDFEPQLSDFGLASWLSTSSSHLTCTDVAGTFGYLAPEYFMHGKVS 513
VIH+D+K N+LL E +++DFG + +S T + GT YL PE
Sbjct: 134 VIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRR----TTLCGTLDYLPPEMIEGRMHD 189
Query: 514 EKIDVYAFGIVLLELLSGKKPINS 537
EK+D+++ G++ E L GK P +
Sbjct: 190 EKVDLWSLGVLCYEFLVGKPPFEA 213
>pdb|2HEN|A Chain A, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|B Chain B, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|C Chain C, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|D Chain D, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
Length = 286
Score = 83.2 bits (204), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 62/209 (29%), Positives = 108/209 (51%), Gaps = 16/209 (7%)
Query: 336 EYLVGKGGHSHVYRGCL--PDGKEL--AVKILKP--SEDVLKEFASEIEIITALHHRNII 389
E ++G G V G L P +E+ A+K LK +E ++F SE I+ H N+I
Sbjct: 12 EQVIGAGEFGEVCSGHLKLPGKREIFVAIKTLKSGYTEKQRRDFLSEASIMGQFDHPNVI 71
Query: 390 SLFGFCFEDNNLLLVYDFLSRGSLEENLHGNKKDGNAFGWTERYKVAVGVAEALDYLHNS 449
L G + ++++ +F+ GSL+ L N DG F + + G+A + YL
Sbjct: 72 HLEGVVTKSTPVMIITEFMENGSLDSFLRQN--DGQ-FTVIQLVGMLRGIAAGMKYL--- 125
Query: 450 CEQPVIHKDVKSSNILLSDDFEPQLSDFGLASWLSTSSSHLTCTDVAG---TFGYLAPEY 506
+ +H+ + + NIL++ + ++SDFGL+ +L +S T T G + APE
Sbjct: 126 ADMNYVHRALAARNILVNSNLVCKVSDFGLSRFLEDDTSDPTYTSALGGKIPIRWTAPEA 185
Query: 507 FMHGKVSEKIDVYAFGIVLLELLS-GKKP 534
+ K + DV+++GIV+ E++S G++P
Sbjct: 186 IQYRKFTSASDVWSYGIVMWEVMSYGERP 214
>pdb|1F3M|C Chain C, Crystal Structure Of Human SerineTHREONINE KINASE PAK1
pdb|1F3M|D Chain D, Crystal Structure Of Human SerineTHREONINE KINASE PAK1
pdb|1YHW|A Chain A, Crystal Structure Of Pak1 Kinase Domain With One Point
Mutations (K299r)
Length = 297
Score = 83.2 bits (204), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 56/204 (27%), Positives = 104/204 (50%), Gaps = 12/204 (5%)
Query: 339 VGKGGHSHVYRGC-LPDGKELAVKILKPSEDVLKEFA-SEIEIITALHHRNIISLFGFCF 396
+G+G VY + G+E+A++ + + KE +EI ++ + NI++
Sbjct: 28 IGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVNYLDSYL 87
Query: 397 EDNNLLLVYDFLSRGSLEENLHGNKKDGNAFGWTERYKVAVGVAEALDYLHNSCEQPVIH 456
+ L +V ++L+ GSL + + D V +AL++LH++ VIH
Sbjct: 88 VGDELWVVMEYLAGGSLTDVVTETCMDEGQIA-----AVCRECLQALEFLHSN---QVIH 139
Query: 457 KDVKSSNILLSDDFEPQLSDFGLASWLSTSSSHLTCTDVAGTFGYLAPEYFMHGKVSEKI 516
+D+KS NILL D +L+DFG + ++ S + + GT ++APE K+
Sbjct: 140 RDIKSDNILLGMDGSVKLTDFGFCAQITPEQSKRST--MVGTPYWMAPEVVTRKAYGPKV 197
Query: 517 DVYAFGIVLLELLSGKKPINSENP 540
D+++ GI+ +E++ G+ P +ENP
Sbjct: 198 DIWSLGIMAIEMIEGEPPYLNENP 221
>pdb|2Y7J|A Chain A, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|B Chain B, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|C Chain C, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|D Chain D, Structure Of Human Phosphorylase Kinase, Gamma 2
Length = 365
Score = 83.2 bits (204), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 64/219 (29%), Positives = 108/219 (49%), Gaps = 29/219 (13%)
Query: 335 PEYLVGKGGHSHVYRGCL--PDGKELAVKILKPS---------EDVLKEFASEIEIITAL 383
P+ ++G+G S V R C+ G E AVKI++ + E+V + E I+ +
Sbjct: 98 PKDVIGRGVSS-VVRRCVHRATGHEFAVKIMEVTAERLSPEQLEEVREATRRETHILRQV 156
Query: 384 H-HRNIISLFGFCFEDNNLLLVYDFLSRGSLEENLHGNKKDGNAFGWTERYKVAVGVAEA 442
H +II+L + + LV+D + +G L + L + A E + + EA
Sbjct: 157 AGHPHIITLIDSYESSSFMFLVFDLMRKGELFDYL----TEKVALSEKETRSIMRSLLEA 212
Query: 443 LDYLHNSCEQPVIHKDVKSSNILLSDDFEPQLSDFGLASWLSTSSSHLTCTDVAGTFGYL 502
+ +LH + ++H+D+K NILL D+ + +LSDFG + L ++ GT GYL
Sbjct: 213 VSFLHANN---IVHRDLKPENILLDDNMQIRLSDFGFSCHLEPGEK---LRELCGTPGYL 266
Query: 503 APEYF------MHGKVSEKIDVYAFGIVLLELLSGKKPI 535
APE H +++D++A G++L LL+G P
Sbjct: 267 APEILKCSMDETHPGYGKEVDLWACGVILFTLLAGSPPF 305
>pdb|3FDN|A Chain A, Structure-Based Drug Design Of Novel Aurora Kinase A
Inhibitors: Structure Basis For Potency And Specificity
pdb|3K5U|A Chain A, Identification, Sar Studies And X-Ray Cocrystal Analysis
Of A Novel Furano-Pyrimidine Aurora Kinase A Inhibitor
pdb|3M11|A Chain A, Crystal Structure Of Aurora A Kinase Complexed With
Inhibitor
Length = 279
Score = 82.8 bits (203), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 60/204 (29%), Positives = 98/204 (48%), Gaps = 16/204 (7%)
Query: 339 VGKGGHSHVYRGCLPDGKE-LAVKILKPSE----DVLKEFASEIEIITALHHRNIISLFG 393
+GKG +VY K LA+K+L ++ V + E+EI + L H NI+ L+G
Sbjct: 17 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 76
Query: 394 FCFEDNNLLLVYDFLSRGSLEENLHGNKKDGNAFGWTERYKVAVGVAEALDYLHNSCEQP 453
+ + + L+ ++ G++ L K F +A AL Y H+ +
Sbjct: 77 YFHDATRVYLILEYAPLGTVYRELQKLSK----FDEQRTATYITELANALSYCHS---KR 129
Query: 454 VIHKDVKSSNILLSDDFEPQLSDFGLASWLSTSSSHLTCTDVAGTFGYLAPEYFMHGKVS 513
VIH+D+K N+LL E +++DFG + +S TD+ GT YL PE
Sbjct: 130 VIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRR----TDLCGTLDYLPPEMIEGRMHD 185
Query: 514 EKIDVYAFGIVLLELLSGKKPINS 537
EK+D+++ G++ E L GK P +
Sbjct: 186 EKVDLWSLGVLCYEFLVGKPPFEA 209
>pdb|3LAU|A Chain A, Crystal Structure Of Aurora2 Kinase In Complex With A
Gsk3beta Inhibitor
Length = 287
Score = 82.8 bits (203), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 60/204 (29%), Positives = 98/204 (48%), Gaps = 16/204 (7%)
Query: 339 VGKGGHSHVYRGCLPDGKE-LAVKILKPSE----DVLKEFASEIEIITALHHRNIISLFG 393
+GKG +VY K LA+K+L ++ V + E+EI + L H NI+ L+G
Sbjct: 16 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 75
Query: 394 FCFEDNNLLLVYDFLSRGSLEENLHGNKKDGNAFGWTERYKVAVGVAEALDYLHNSCEQP 453
+ + + L+ ++ G++ L K F +A AL Y H+ +
Sbjct: 76 YFHDATRVYLILEYAPLGTVYRELQKLSK----FDEQRTATYITELANALSYCHS---KR 128
Query: 454 VIHKDVKSSNILLSDDFEPQLSDFGLASWLSTSSSHLTCTDVAGTFGYLAPEYFMHGKVS 513
VIH+D+K N+LL E +++DFG + +S TD+ GT YL PE
Sbjct: 129 VIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRR----TDLCGTLDYLPPEMIEGRMHD 184
Query: 514 EKIDVYAFGIVLLELLSGKKPINS 537
EK+D+++ G++ E L GK P +
Sbjct: 185 EKVDLWSLGVLCYEFLVGKPPFEA 208
>pdb|1FMK|A Chain A, Crystal Structure Of Human Tyrosine-Protein Kinase C-Src
pdb|2SRC|A Chain A, Crystal Structure Of Human Tyrosine-protein Kinase C-src,
In Complex With Amp-pnp
Length = 452
Score = 82.8 bits (203), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 53/200 (26%), Positives = 103/200 (51%), Gaps = 8/200 (4%)
Query: 336 EYLVGKGGHSHVYRGCLPDGKELAVKILKPSEDVLKEFASEIEIITALHHRNIISLFGFC 395
E +G+G V+ G +A+K LKP + F E +++ L H ++ L+
Sbjct: 189 EVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQLYAVV 248
Query: 396 FEDNNLLLVYDFLSRGSLEENLHGNKKDGNAFGWTERYKVAVGVAEALDYLHNSCEQPVI 455
E+ + +V +++S+GSL + L G + G + +A +A + Y+ +
Sbjct: 249 SEE-PIYIVTEYMSKGSLLDFLKG--ETGKYLRLPQLVDMAAQIASGMAYVER---MNYV 302
Query: 456 HKDVKSSNILLSDDFEPQLSDFGLASWLSTSSSHLTCTDVAGTFGYLAPEYFMHGKVSEK 515
H+D++++NIL+ ++ +++DFGLA L + + + APE ++G+ + K
Sbjct: 303 HRDLRAANILVGENLVCKVADFGLAR-LIEDNEYTARQGAKFPIKWTAPEAALYGRFTIK 361
Query: 516 IDVYAFGIVLLELLS-GKKP 534
DV++FGI+L EL + G+ P
Sbjct: 362 SDVWSFGILLTELTTKGRVP 381
>pdb|2C6D|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With
Adpnp
Length = 275
Score = 82.8 bits (203), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 60/204 (29%), Positives = 98/204 (48%), Gaps = 16/204 (7%)
Query: 339 VGKGGHSHVYRGCLPDGKE-LAVKILKPSE----DVLKEFASEIEIITALHHRNIISLFG 393
+GKG +VY K LA+K+L ++ V + E+EI + L H NI+ L+G
Sbjct: 16 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 75
Query: 394 FCFEDNNLLLVYDFLSRGSLEENLHGNKKDGNAFGWTERYKVAVGVAEALDYLHNSCEQP 453
+ + + L+ ++ G++ L K F +A AL Y H+ +
Sbjct: 76 YFHDATRVYLILEYAPLGTVYRELQKLSK----FDEQRTATYITELANALSYCHS---KR 128
Query: 454 VIHKDVKSSNILLSDDFEPQLSDFGLASWLSTSSSHLTCTDVAGTFGYLAPEYFMHGKVS 513
VIH+D+K N+LL E +++DFG + +S TD+ GT YL PE
Sbjct: 129 VIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRR----TDLCGTLDYLPPEMIEGRMHD 184
Query: 514 EKIDVYAFGIVLLELLSGKKPINS 537
EK+D+++ G++ E L GK P +
Sbjct: 185 EKVDLWSLGVLCYEFLVGKPPFEA 208
>pdb|3IEC|A Chain A, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|B Chain B, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|C Chain C, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|D Chain D, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
Length = 319
Score = 82.8 bits (203), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 67/221 (30%), Positives = 113/221 (51%), Gaps = 21/221 (9%)
Query: 339 VGKGGHSHV--YRGCLPDGKELAVKILKPSE---DVLKEFASEIEIITALHHRNIISLFG 393
+GKG + V R L GKE+AVKI+ ++ L++ E+ I+ L+H NI+ LF
Sbjct: 15 IGKGNFAKVKLARHILT-GKEVAVKIIDKTQLNSSSLQKLFREVRIMKVLNHPNIVKLFE 73
Query: 394 FCFEDNNLLLVYDFLSRGSLEENL--HGNKKDGNAFGWTERYKVAVGVAEALDYLHNSCE 451
+ L LV ++ S G + + L HG K+ A R K + A+ Y H +
Sbjct: 74 VIETEKTLYLVMEYASGGEVFDYLVAHGWMKEKEA-----RAKFR-QIVSAVQYCH---Q 124
Query: 452 QPVIHKDVKSSNILLSDDFEPQLSDFGLASWLSTSSSHLTCTDVAGTFGYLAPEYFMHGK 511
+ ++H+D+K+ N+LL D +++DFG ++ + + T G+ Y APE F K
Sbjct: 125 KFIVHRDLKAENLLLDADMNIKIADFGFSNEFTFGNKLDT---FCGSPPYAAPELFQGKK 181
Query: 512 V-SEKIDVYAFGIVLLELLSGKKPINSENPKGQESLVMWAK 551
++DV++ G++L L+SG P + +N K V+ K
Sbjct: 182 YDGPEVDVWSLGVILYTLVSGSLPFDGQNLKELRERVLRGK 222
>pdb|2BDF|A Chain A, Src Kinase In Complex With Inhibitor Ap23451
pdb|2BDF|B Chain B, Src Kinase In Complex With Inhibitor Ap23451
pdb|2BDJ|A Chain A, Src Kinase In Complex With Inhibitor Ap23464
Length = 279
Score = 82.8 bits (203), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 52/197 (26%), Positives = 102/197 (51%), Gaps = 8/197 (4%)
Query: 339 VGKGGHSHVYRGCLPDGKELAVKILKPSEDVLKEFASEIEIITALHHRNIISLFGFCFED 398
+G+G V+ G +A+K LKP + F E +++ L H ++ L+ E+
Sbjct: 19 LGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQLYAVVSEE 78
Query: 399 NNLLLVYDFLSRGSLEENLHGNKKDGNAFGWTERYKVAVGVAEALDYLHNSCEQPVIHKD 458
+ +V +++S+GSL + L G + G + +A +A + Y+ +H+D
Sbjct: 79 -PIYIVTEYMSKGSLLDFLKG--ETGKYLRLPQLVDMAAQIASGMAYVER---MNYVHRD 132
Query: 459 VKSSNILLSDDFEPQLSDFGLASWLSTSSSHLTCTDVAGTFGYLAPEYFMHGKVSEKIDV 518
++++NIL+ ++ +++DFGLA L + + + APE ++G+ + K DV
Sbjct: 133 LRAANILVGENLVCKVADFGLAR-LIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDV 191
Query: 519 YAFGIVLLELLS-GKKP 534
++FGI+L EL + G+ P
Sbjct: 192 WSFGILLTELTTKGRVP 208
>pdb|2C6E|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With A
5-Aminopyrimidinyl Quinazoline Inhibitor
pdb|2C6E|B Chain B, Aurora A Kinase Activated Mutant (T287d) In Complex With A
5-Aminopyrimidinyl Quinazoline Inhibitor
Length = 283
Score = 82.8 bits (203), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 60/204 (29%), Positives = 98/204 (48%), Gaps = 16/204 (7%)
Query: 339 VGKGGHSHVYRGCLPDGKE-LAVKILKPSE----DVLKEFASEIEIITALHHRNIISLFG 393
+GKG +VY K LA+K+L ++ V + E+EI + L H NI+ L+G
Sbjct: 21 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 80
Query: 394 FCFEDNNLLLVYDFLSRGSLEENLHGNKKDGNAFGWTERYKVAVGVAEALDYLHNSCEQP 453
+ + + L+ ++ G++ L K F +A AL Y H+ +
Sbjct: 81 YFHDATRVYLILEYAPLGTVYRELQKLSK----FDEQRTATYITELANALSYCHS---KR 133
Query: 454 VIHKDVKSSNILLSDDFEPQLSDFGLASWLSTSSSHLTCTDVAGTFGYLAPEYFMHGKVS 513
VIH+D+K N+LL E +++DFG + +S TD+ GT YL PE
Sbjct: 134 VIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRR----TDLCGTLDYLPPEMIEGRMHD 189
Query: 514 EKIDVYAFGIVLLELLSGKKPINS 537
EK+D+++ G++ E L GK P +
Sbjct: 190 EKVDLWSLGVLCYEFLVGKPPFEA 213
>pdb|3RHX|B Chain B, Crystal Structure Of The Catalytic Domain Of Fgfr1 Kinase
In Complex With Arq 069
pdb|3RHX|A Chain A, Crystal Structure Of The Catalytic Domain Of Fgfr1 Kinase
In Complex With Arq 069
Length = 306
Score = 82.8 bits (203), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 51/189 (26%), Positives = 99/189 (52%), Gaps = 18/189 (9%)
Query: 357 ELAVKILK--PSEDVLKEFASEIEIITAL-HHRNIISLFGFCFEDNNLLLVYDFLSRGSL 413
++AVK+LK +E L + SE+E++ + H+NII+L G C +D L ++ ++ S+G+L
Sbjct: 51 KVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNL 110
Query: 414 EENLHGNKKDGNAFGWTERYK------------VAVGVAEALDYLHNSCEQPVIHKDVKS 461
E L + G + + + A VA ++YL + IH+D+ +
Sbjct: 111 REYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSCAYQVARGMEYL---ASKKCIHRDLAA 167
Query: 462 SNILLSDDFEPQLSDFGLASWLSTSSSHLTCTDVAGTFGYLAPEYFMHGKVSEKIDVYAF 521
N+L+++D +++DFGLA + + T+ ++APE + + DV++F
Sbjct: 168 RNVLVTEDNVMKIADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSF 227
Query: 522 GIVLLELLS 530
G++L E+ +
Sbjct: 228 GVLLWEIFT 236
>pdb|3FE3|A Chain A, Crystal Structure Of The Kinase Mark3PAR-1: T211a-S215a
Double Mutant
pdb|3FE3|B Chain B, Crystal Structure Of The Kinase Mark3PAR-1: T211a-S215a
Double Mutant
Length = 328
Score = 82.8 bits (203), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 63/221 (28%), Positives = 110/221 (49%), Gaps = 21/221 (9%)
Query: 339 VGKGGHSHV--YRGCLPDGKELAVKILKPSE---DVLKEFASEIEIITALHHRNIISLFG 393
+GKG + V R L G+E+A+KI+ ++ L++ E+ I+ L+H NI+ LF
Sbjct: 23 IGKGNFAKVKLARHILT-GREVAIKIIDKTQLNPTSLQKLFREVRIMKILNHPNIVKLFE 81
Query: 394 FCFEDNNLLLVYDFLSRGSLEENL--HGNKKDGNAFGWTERYKVAVGVAEALDYLHNSCE 451
+ L L+ ++ S G + + L HG K+ A R K + A+ Y H +
Sbjct: 82 VIETEKTLYLIMEYASGGEVFDYLVAHGRMKEKEA-----RSKFR-QIVSAVQYCH---Q 132
Query: 452 QPVIHKDVKSSNILLSDDFEPQLSDFGLASWLSTSSSHLTCTDVAGTFGYLAPEYFMHGK 511
+ ++H+D+K+ N+LL D +++DFG ++ + G Y APE F K
Sbjct: 133 KRIVHRDLKAENLLLDADMNIKIADFGFSNEFTVGGK---LDAFCGAPPYAAPELFQGKK 189
Query: 512 V-SEKIDVYAFGIVLLELLSGKKPINSENPKGQESLVMWAK 551
++DV++ G++L L+SG P + +N K V+ K
Sbjct: 190 YDGPEVDVWSLGVILYTLVSGSLPFDGQNLKELRERVLRGK 230
>pdb|1Y57|A Chain A, Structure Of Unphosphorylated C-Src In Complex With An
Inhibitor
Length = 452
Score = 82.8 bits (203), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 53/200 (26%), Positives = 103/200 (51%), Gaps = 8/200 (4%)
Query: 336 EYLVGKGGHSHVYRGCLPDGKELAVKILKPSEDVLKEFASEIEIITALHHRNIISLFGFC 395
E +G+G V+ G +A+K LKP + F E +++ L H ++ L+
Sbjct: 189 EVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQLYAVV 248
Query: 396 FEDNNLLLVYDFLSRGSLEENLHGNKKDGNAFGWTERYKVAVGVAEALDYLHNSCEQPVI 455
E+ + +V +++S+GSL + L G + G + +A +A + Y+ +
Sbjct: 249 SEE-PIYIVTEYMSKGSLLDFLKG--ETGKYLRLPQLVDMAAQIASGMAYVER---MNYV 302
Query: 456 HKDVKSSNILLSDDFEPQLSDFGLASWLSTSSSHLTCTDVAGTFGYLAPEYFMHGKVSEK 515
H+D++++NIL+ ++ +++DFGLA L + + + APE ++G+ + K
Sbjct: 303 HRDLRAANILVGENLVCKVADFGLAR-LIEDNEYTARQGAKFPIKWTAPEAALYGRFTIK 361
Query: 516 IDVYAFGIVLLELLS-GKKP 534
DV++FGI+L EL + G+ P
Sbjct: 362 SDVWSFGILLTELTTKGRVP 381
>pdb|3Q52|A Chain A, Structure Of Phosphorylated Pak1 Kinase Domain
pdb|3Q53|A Chain A, Structure Of Phosphorylated Pak1 Kinase Domain In Complex
With Atp
Length = 306
Score = 82.8 bits (203), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 56/204 (27%), Positives = 104/204 (50%), Gaps = 12/204 (5%)
Query: 339 VGKGGHSHVYRGC-LPDGKELAVKILKPSEDVLKEFA-SEIEIITALHHRNIISLFGFCF 396
+G+G VY + G+E+A++ + + KE +EI ++ + NI++
Sbjct: 29 IGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVNYLDSYL 88
Query: 397 EDNNLLLVYDFLSRGSLEENLHGNKKDGNAFGWTERYKVAVGVAEALDYLHNSCEQPVIH 456
+ L +V ++L+ GSL + + D V +AL++LH++ VIH
Sbjct: 89 VGDELWVVMEYLAGGSLTDVVTETCMDEGQIA-----AVCRECLQALEFLHSN---QVIH 140
Query: 457 KDVKSSNILLSDDFEPQLSDFGLASWLSTSSSHLTCTDVAGTFGYLAPEYFMHGKVSEKI 516
+D+KS NILL D +L+DFG + ++ S + + GT ++APE K+
Sbjct: 141 RDIKSDNILLGMDGSVKLTDFGFCAQITPEQSKR--SXMVGTPYWMAPEVVTRKAYGPKV 198
Query: 517 DVYAFGIVLLELLSGKKPINSENP 540
D+++ GI+ +E++ G+ P +ENP
Sbjct: 199 DIWSLGIMAIEMIEGEPPYLNENP 222
>pdb|4F63|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 1
pdb|4F63|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 1
pdb|4F64|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 6
pdb|4F64|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 6
pdb|4F65|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 8
pdb|4F65|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 8
Length = 309
Score = 82.8 bits (203), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 51/189 (26%), Positives = 99/189 (52%), Gaps = 18/189 (9%)
Query: 357 ELAVKILK--PSEDVLKEFASEIEIITAL-HHRNIISLFGFCFEDNNLLLVYDFLSRGSL 413
++AVK+LK +E L + SE+E++ + H+NII+L G C +D L ++ ++ S+G+L
Sbjct: 54 KVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNL 113
Query: 414 EENLHGNKKDGNAFGWTERYK------------VAVGVAEALDYLHNSCEQPVIHKDVKS 461
E L + G + + + A VA ++YL + IH+D+ +
Sbjct: 114 REYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSCAYQVARGMEYL---ASKKCIHRDLAA 170
Query: 462 SNILLSDDFEPQLSDFGLASWLSTSSSHLTCTDVAGTFGYLAPEYFMHGKVSEKIDVYAF 521
N+L+++D +++DFGLA + + T+ ++APE + + DV++F
Sbjct: 171 RNVLVTEDNVMKIADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSF 230
Query: 522 GIVLLELLS 530
G++L E+ +
Sbjct: 231 GVLLWEIFT 239
>pdb|3FXZ|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Ruthenium
Complex Lambda-Fl172
pdb|3FY0|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Ruthenium
Complex Dw1
pdb|4DAW|A Chain A, Crystal Structure Of Pak1 Kinase Domain With The Ruthenium
Phthalimide Complex
Length = 297
Score = 82.8 bits (203), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 56/204 (27%), Positives = 104/204 (50%), Gaps = 12/204 (5%)
Query: 339 VGKGGHSHVYRGC-LPDGKELAVKILKPSEDVLKEFA-SEIEIITALHHRNIISLFGFCF 396
+G+G VY + G+E+A++ + + KE +EI ++ + NI++
Sbjct: 28 IGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVNYLDSYL 87
Query: 397 EDNNLLLVYDFLSRGSLEENLHGNKKDGNAFGWTERYKVAVGVAEALDYLHNSCEQPVIH 456
+ L +V ++L+ GSL + + D V +AL++LH++ VIH
Sbjct: 88 VGDELWVVMEYLAGGSLTDVVTETCMDEGQIA-----AVCRECLQALEFLHSN---QVIH 139
Query: 457 KDVKSSNILLSDDFEPQLSDFGLASWLSTSSSHLTCTDVAGTFGYLAPEYFMHGKVSEKI 516
+D+KS NILL D +L+DFG + ++ S + + GT ++APE K+
Sbjct: 140 RDIKSDNILLGMDGSVKLTDFGFCAQITPEQSKR--SXMVGTPYWMAPEVVTRKAYGPKV 197
Query: 517 DVYAFGIVLLELLSGKKPINSENP 540
D+++ GI+ +E++ G+ P +ENP
Sbjct: 198 DIWSLGIMAIEMIEGEPPYLNENP 221
>pdb|1FGK|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1
pdb|1FGK|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1
pdb|1FGI|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su5402 Inhibitor
pdb|1FGI|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su5402 Inhibitor
pdb|1AGW|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su4984 Inhibitor
pdb|1AGW|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su4984 Inhibitor
pdb|2FGI|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of Fgf
Receptor 1 In Complex With Inhibitor Pd173074
pdb|2FGI|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of Fgf
Receptor 1 In Complex With Inhibitor Pd173074
Length = 310
Score = 82.4 bits (202), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 51/189 (26%), Positives = 99/189 (52%), Gaps = 18/189 (9%)
Query: 357 ELAVKILK--PSEDVLKEFASEIEIITAL-HHRNIISLFGFCFEDNNLLLVYDFLSRGSL 413
++AVK+LK +E L + SE+E++ + H+NII+L G C +D L ++ ++ S+G+L
Sbjct: 55 KVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNL 114
Query: 414 EENLHGNKKDGNAFGWTERYK------------VAVGVAEALDYLHNSCEQPVIHKDVKS 461
E L + G + + + A VA ++YL + IH+D+ +
Sbjct: 115 REYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSCAYQVARGMEYL---ASKKCIHRDLAA 171
Query: 462 SNILLSDDFEPQLSDFGLASWLSTSSSHLTCTDVAGTFGYLAPEYFMHGKVSEKIDVYAF 521
N+L+++D +++DFGLA + + T+ ++APE + + DV++F
Sbjct: 172 RNVLVTEDNVMKIADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSF 231
Query: 522 GIVLLELLS 530
G++L E+ +
Sbjct: 232 GVLLWEIFT 240
>pdb|3JS2|A Chain A, Crystal Structure Of Minimal Kinase Domain Of Fibroblast
Growth Factor Receptor 1 In Complex With 5-(2-Thienyl)
Nicotinic Acid
pdb|3JS2|B Chain B, Crystal Structure Of Minimal Kinase Domain Of Fibroblast
Growth Factor Receptor 1 In Complex With 5-(2-Thienyl)
Nicotinic Acid
pdb|3KY2|A Chain A, Crystal Structure Of Fibroblast Growth Factor Receptor 1
Kinase Domain
pdb|3KY2|B Chain B, Crystal Structure Of Fibroblast Growth Factor Receptor 1
Kinase Domain
Length = 317
Score = 82.4 bits (202), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 51/189 (26%), Positives = 99/189 (52%), Gaps = 18/189 (9%)
Query: 357 ELAVKILK--PSEDVLKEFASEIEIITAL-HHRNIISLFGFCFEDNNLLLVYDFLSRGSL 413
++AVK+LK +E L + SE+E++ + H+NII+L G C +D L ++ ++ S+G+L
Sbjct: 62 KVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNL 121
Query: 414 EENLHGNKKDGNAFGWTERYK------------VAVGVAEALDYLHNSCEQPVIHKDVKS 461
E L + G + + + A VA ++YL + IH+D+ +
Sbjct: 122 REYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSCAYQVARGMEYL---ASKKCIHRDLAA 178
Query: 462 SNILLSDDFEPQLSDFGLASWLSTSSSHLTCTDVAGTFGYLAPEYFMHGKVSEKIDVYAF 521
N+L+++D +++DFGLA + + T+ ++APE + + DV++F
Sbjct: 179 RNVLVTEDNVMKIADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSF 238
Query: 522 GIVLLELLS 530
G++L E+ +
Sbjct: 239 GVLLWEIFT 247
>pdb|2H8H|A Chain A, Src Kinase In Complex With A Quinazoline Inhibitor
Length = 535
Score = 82.4 bits (202), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 53/200 (26%), Positives = 103/200 (51%), Gaps = 8/200 (4%)
Query: 336 EYLVGKGGHSHVYRGCLPDGKELAVKILKPSEDVLKEFASEIEIITALHHRNIISLFGFC 395
E +G+G V+ G +A+K LKP + F E +++ L H ++ L+
Sbjct: 272 EVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQLYAVV 331
Query: 396 FEDNNLLLVYDFLSRGSLEENLHGNKKDGNAFGWTERYKVAVGVAEALDYLHNSCEQPVI 455
E+ + +V +++S+GSL + L G + G + +A +A + Y+ +
Sbjct: 332 SEE-PIYIVTEYMSKGSLLDFLKG--ETGKYLRLPQLVDMAAQIASGMAYVER---MNYV 385
Query: 456 HKDVKSSNILLSDDFEPQLSDFGLASWLSTSSSHLTCTDVAGTFGYLAPEYFMHGKVSEK 515
H+D++++NIL+ ++ +++DFGLA L + + + APE ++G+ + K
Sbjct: 386 HRDLRAANILVGENLVCKVADFGLAR-LIEDNEYTARQGAKFPIKWTAPEAALYGRFTIK 444
Query: 516 IDVYAFGIVLLELLS-GKKP 534
DV++FGI+L EL + G+ P
Sbjct: 445 SDVWSFGILLTELTTKGRVP 464
>pdb|1KSW|A Chain A, Structure Of Human C-Src Tyrosine Kinase (Thr338gly
Mutant) In Complex With N6-Benzyl Adp
Length = 452
Score = 82.4 bits (202), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 53/200 (26%), Positives = 103/200 (51%), Gaps = 8/200 (4%)
Query: 336 EYLVGKGGHSHVYRGCLPDGKELAVKILKPSEDVLKEFASEIEIITALHHRNIISLFGFC 395
E +G+G V+ G +A+K LKP + F E +++ L H ++ L+
Sbjct: 189 EVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQLYAVV 248
Query: 396 FEDNNLLLVYDFLSRGSLEENLHGNKKDGNAFGWTERYKVAVGVAEALDYLHNSCEQPVI 455
E+ + +V +++S+GSL + L G + G + +A +A + Y+ +
Sbjct: 249 SEE-PIYIVGEYMSKGSLLDFLKG--ETGKYLRLPQLVDMAAQIASGMAYVER---MNYV 302
Query: 456 HKDVKSSNILLSDDFEPQLSDFGLASWLSTSSSHLTCTDVAGTFGYLAPEYFMHGKVSEK 515
H+D++++NIL+ ++ +++DFGLA L + + + APE ++G+ + K
Sbjct: 303 HRDLRAANILVGENLVCKVADFGLAR-LIEDNEYTARQGAKFPIKWTAPEAALYGRFTIK 361
Query: 516 IDVYAFGIVLLELLS-GKKP 534
DV++FGI+L EL + G+ P
Sbjct: 362 SDVWSFGILLTELTTKGRVP 381
>pdb|3GQI|A Chain A, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
Length = 326
Score = 82.4 bits (202), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 52/189 (27%), Positives = 98/189 (51%), Gaps = 18/189 (9%)
Query: 357 ELAVKILK--PSEDVLKEFASEIEIITAL-HHRNIISLFGFCFEDNNLLLVYDFLSRGSL 413
++AVK+LK +E L + SE+E++ + H+NII+L G C +D L ++ ++ S+G+L
Sbjct: 62 KVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNL 121
Query: 414 EENLHGNKKDGNAFGWTERYK------------VAVGVAEALDYLHNSCEQPVIHKDVKS 461
E L + G F + + A VA ++YL + IH+D+ +
Sbjct: 122 REYLQARRPPGLEFSFNPSHNPEEQLSSKDLVSCAYQVARGMEYL---ASKKCIHRDLAA 178
Query: 462 SNILLSDDFEPQLSDFGLASWLSTSSSHLTCTDVAGTFGYLAPEYFMHGKVSEKIDVYAF 521
N+L+++D +++DFGLA + T+ ++APE + + DV++F
Sbjct: 179 RNVLVTEDNVMKIADFGLARDIHHIDXXKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSF 238
Query: 522 GIVLLELLS 530
G++L E+ +
Sbjct: 239 GVLLWEIFT 247
>pdb|2YAC|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With
Nms-P937
pdb|4A4L|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
5-(2-Amino-Pyrimidin-4-Yl)-1h-Pyrrole Inhibitor
pdb|4A4O|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
2-
(2-Amino-Pyrimidin-4-Yl)-1,5,6,
7-Tetrahydro-Pyrrolopyridin- 4-One Inhibitor
Length = 311
Score = 82.4 bits (202), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 63/206 (30%), Positives = 100/206 (48%), Gaps = 16/206 (7%)
Query: 338 LVGKGGHSHVYRGCLPDGKELAVKILKPSEDVLK-----EFASEIEIITALHHRNIISLF 392
+GKGG + + D KE+ + P +LK + + EI I +L H++++
Sbjct: 24 FLGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFH 83
Query: 393 GFCFEDNNLLLV-YDFLSRGSLEENLHGNKKDGNAFGWTERYKVAVGVAEALDYLHNSCE 451
GF FEDN+ + V + R SL E LH +K A E + YLH +
Sbjct: 84 GF-FEDNDFVFVVLELCRRRSLLE-LHKRRK---ALTEPEARYYLRQIVLGCQYLHRN-- 136
Query: 452 QPVIHKDVKSSNILLSDDFEPQLSDFGLASWLSTSSSHLTCTDVAGTFGYLAPEYFMHGK 511
VIH+D+K N+ L++D E ++ DFGLA+ + + GT Y+APE
Sbjct: 137 -RVIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERK--KTLCGTPNYIAPEVLSKKG 193
Query: 512 VSEKIDVYAFGIVLLELLSGKKPINS 537
S ++DV++ G ++ LL GK P +
Sbjct: 194 HSFEVDVWSIGCIMYTLLVGKPPFET 219
>pdb|3THB|A Chain A, Structure Of Plk1 Kinase Domain In Complex With A
Benzolactam-Derived Inhibitor
Length = 333
Score = 82.4 bits (202), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 63/206 (30%), Positives = 100/206 (48%), Gaps = 16/206 (7%)
Query: 338 LVGKGGHSHVYRGCLPDGKELAVKILKPSEDVLK-----EFASEIEIITALHHRNIISLF 392
+GKGG + + D KE+ + P +LK + + EI I +L H++++
Sbjct: 46 FLGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFH 105
Query: 393 GFCFEDNNLLLV-YDFLSRGSLEENLHGNKKDGNAFGWTERYKVAVGVAEALDYLHNSCE 451
GF FEDN+ + V + R SL E LH +K A E + YLH +
Sbjct: 106 GF-FEDNDFVFVVLELCRRRSLLE-LHKRRK---ALTEPEARYYLRQIVLGCQYLHRN-- 158
Query: 452 QPVIHKDVKSSNILLSDDFEPQLSDFGLASWLSTSSSHLTCTDVAGTFGYLAPEYFMHGK 511
VIH+D+K N+ L++D E ++ DFGLA+ + + GT Y+APE
Sbjct: 159 -RVIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERKKV--LCGTPNYIAPEVLSKKG 215
Query: 512 VSEKIDVYAFGIVLLELLSGKKPINS 537
S ++DV++ G ++ LL GK P +
Sbjct: 216 HSFEVDVWSIGCIMYTLLVGKPPFET 241
>pdb|3G6H|A Chain A, Src Thr338ile Inhibited In The Dfg-Asp-Out Conformation
pdb|3G6H|B Chain B, Src Thr338ile Inhibited In The Dfg-Asp-Out Conformation
Length = 286
Score = 82.4 bits (202), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 52/197 (26%), Positives = 101/197 (51%), Gaps = 8/197 (4%)
Query: 339 VGKGGHSHVYRGCLPDGKELAVKILKPSEDVLKEFASEIEIITALHHRNIISLFGFCFED 398
+G+G V+ G +A+K LKP + F E +++ L H ++ L+ E+
Sbjct: 26 LGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQLYAVVSEE 85
Query: 399 NNLLLVYDFLSRGSLEENLHGNKKDGNAFGWTERYKVAVGVAEALDYLHNSCEQPVIHKD 458
+ +V +++S+GSL + L G G + +A +A + Y+ +H+D
Sbjct: 86 -PIYIVIEYMSKGSLLDFLKGEM--GKYLRLPQLVDMAAQIASGMAYVER---MNYVHRD 139
Query: 459 VKSSNILLSDDFEPQLSDFGLASWLSTSSSHLTCTDVAGTFGYLAPEYFMHGKVSEKIDV 518
++++NIL+ ++ +++DFGLA L + + + APE ++G+ + K DV
Sbjct: 140 LRAANILVGENLVCKVADFGLAR-LIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDV 198
Query: 519 YAFGIVLLELLS-GKKP 534
++FGI+L EL + G+ P
Sbjct: 199 WSFGILLTELTTKGRVP 215
>pdb|3D7U|B Chain B, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3D7U|D Chain D, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 277
Score = 82.4 bits (202), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 52/197 (26%), Positives = 101/197 (51%), Gaps = 8/197 (4%)
Query: 339 VGKGGHSHVYRGCLPDGKELAVKILKPSEDVLKEFASEIEIITALHHRNIISLFGFCFED 398
+G+G V+ G +A+K LKP + F E +++ L H ++ L+ E+
Sbjct: 17 LGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQLYAVVSEE 76
Query: 399 NNLLLVYDFLSRGSLEENLHGNKKDGNAFGWTERYKVAVGVAEALDYLHNSCEQPVIHKD 458
+ +V +++S+GSL + L G G + +A +A + Y+ +H+D
Sbjct: 77 -PIYIVTEYMSKGSLLDFLKGEM--GKYLRLPQLVDMAAQIASGMAYVER---MNYVHRD 130
Query: 459 VKSSNILLSDDFEPQLSDFGLASWLSTSSSHLTCTDVAGTFGYLAPEYFMHGKVSEKIDV 518
++++NIL+ ++ +++DFGLA L + + + APE ++G+ + K DV
Sbjct: 131 LRAANILVGENLVCKVADFGLAR-LIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDV 189
Query: 519 YAFGIVLLELLS-GKKP 534
++FGI+L EL + G+ P
Sbjct: 190 WSFGILLTELTTKGRVP 206
>pdb|2V5Q|A Chain A, Crystal Structure Of Wild-type Plk-1 Kinase Domain In
Complex With A Selective Darpin
pdb|2V5Q|B Chain B, Crystal Structure Of Wild-type Plk-1 Kinase Domain In
Complex With A Selective Darpin
Length = 315
Score = 82.4 bits (202), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 63/206 (30%), Positives = 100/206 (48%), Gaps = 16/206 (7%)
Query: 338 LVGKGGHSHVYRGCLPDGKELAVKILKPSEDVLK-----EFASEIEIITALHHRNIISLF 392
+GKGG + + D KE+ + P +LK + + EI I +L H++++
Sbjct: 28 FLGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFH 87
Query: 393 GFCFEDNNLLLV-YDFLSRGSLEENLHGNKKDGNAFGWTERYKVAVGVAEALDYLHNSCE 451
GF FEDN+ + V + R SL E LH +K A E + YLH +
Sbjct: 88 GF-FEDNDFVFVVLELCRRRSLLE-LHKRRK---ALTEPEARYYLRQIVLGCQYLHRN-- 140
Query: 452 QPVIHKDVKSSNILLSDDFEPQLSDFGLASWLSTSSSHLTCTDVAGTFGYLAPEYFMHGK 511
VIH+D+K N+ L++D E ++ DFGLA+ + + GT Y+APE
Sbjct: 141 -RVIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERK--KTLCGTPNYIAPEVLSKKG 197
Query: 512 VSEKIDVYAFGIVLLELLSGKKPINS 537
S ++DV++ G ++ LL GK P +
Sbjct: 198 HSFEVDVWSIGCIMYTLLVGKPPFET 223
>pdb|1Y8G|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Inactive Double Mutant With Selenomethionine
pdb|1Y8G|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Inactive Double Mutant With Selenomethionine
Length = 327
Score = 82.0 bits (201), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 64/221 (28%), Positives = 109/221 (49%), Gaps = 21/221 (9%)
Query: 339 VGKGGHSHV--YRGCLPDGKELAVKILKPSE---DVLKEFASEIEIITALHHRNIISLFG 393
+GKG + V R L GKE+AVKI+ ++ L++ E+ I L+H NI+ LF
Sbjct: 22 IGKGNFAKVKLARHIL-TGKEVAVKIIDKTQLNSSSLQKLFREVRIXKVLNHPNIVKLFE 80
Query: 394 FCFEDNNLLLVYDFLSRGSLEENL--HGNKKDGNAFGWTERYKVAVGVAEALDYLHNSCE 451
+ L LV ++ S G + + L HG K+ A + + A+ Y H +
Sbjct: 81 VIETEKTLYLVXEYASGGEVFDYLVAHGRXKEKEARAKFRQ------IVSAVQYCH---Q 131
Query: 452 QPVIHKDVKSSNILLSDDFEPQLSDFGLASWLSTSSSHLTCTDVAGTFGYLAPEYFMHGK 511
+ ++H+D+K+ N+LL D +++DFG ++ + + G Y APE F K
Sbjct: 132 KFIVHRDLKAENLLLDADXNIKIADFGFSNEFTFGNK---LDAFCGAPPYAAPELFQGKK 188
Query: 512 V-SEKIDVYAFGIVLLELLSGKKPINSENPKGQESLVMWAK 551
++DV++ G++L L+SG P + +N K V+ K
Sbjct: 189 YDGPEVDVWSLGVILYTLVSGSLPFDGQNLKELRERVLRGK 229
>pdb|3U4W|A Chain A, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc4b
pdb|3U51|A Chain A, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc1
pdb|3U51|B Chain B, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc1
Length = 275
Score = 82.0 bits (201), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 52/197 (26%), Positives = 101/197 (51%), Gaps = 8/197 (4%)
Query: 339 VGKGGHSHVYRGCLPDGKELAVKILKPSEDVLKEFASEIEIITALHHRNIISLFGFCFED 398
+G+G V+ G +A+K LKP + F E +++ L H ++ L+ E+
Sbjct: 15 LGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQLYAVVSEE 74
Query: 399 NNLLLVYDFLSRGSLEENLHGNKKDGNAFGWTERYKVAVGVAEALDYLHNSCEQPVIHKD 458
+ +V +++S+GSL + L G G + +A +A + Y+ +H+D
Sbjct: 75 -PIYIVTEYMSKGSLLDFLKGEM--GKYLRLPQLVDMAAQIASGMAYVER---MNYVHRD 128
Query: 459 VKSSNILLSDDFEPQLSDFGLASWLSTSSSHLTCTDVAGTFGYLAPEYFMHGKVSEKIDV 518
++++NIL+ ++ +++DFGLA L + + + APE ++G+ + K DV
Sbjct: 129 LRAANILVGENLVCKVADFGLAR-LIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDV 187
Query: 519 YAFGIVLLELLS-GKKP 534
++FGI+L EL + G+ P
Sbjct: 188 WSFGILLTELTTKGRVP 204
>pdb|4F1O|A Chain A, Crystal Structure Of The L1180t Mutant Roco4 Kinase Domain
From D. Discoideum Bound To Appcp
Length = 287
Score = 82.0 bits (201), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 64/214 (29%), Positives = 112/214 (52%), Gaps = 27/214 (12%)
Query: 339 VGKGGHSHVYRGCL-PDGKELAVK--ILKPSE------DVLKEFASEIEIITALHHRNII 389
+GKGG V++G L D +A+K IL SE + +EF E+ I++ L+H NI+
Sbjct: 27 IGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQREVFIMSNLNHPNIV 86
Query: 390 SLFGFCFEDNNLLLVYDFLSRGSLEENLHGNKKDGNAFGWTERYKVAVGVAEALDYLHNS 449
L+G N +V +F+ G L L + W+ + ++ + +A ++Y+ N
Sbjct: 87 KLYGLM--HNPPRMVMEFVPCGDLYHRL---LDKAHPIKWSVKLRLMLDIALGIEYMQNQ 141
Query: 450 CEQPVIHKDVKSSNILLS--DDFEP---QLSDFGLASWLSTSSSHLTCTDVAGTFGYLAP 504
P++H+D++S NI L D+ P +++DFG S S H + + + G F ++AP
Sbjct: 142 -NPPIVHRDLRSPNIFLQSLDENAPVCAKVADFG----TSQQSVH-SVSGLLGNFQWMAP 195
Query: 505 EYFMHGKVS--EKIDVYAFGIVLLELLSGKKPIN 536
E + S EK D Y+F ++L +L+G+ P +
Sbjct: 196 ETIGAEEESYTEKADTYSFAMILYTILTGEGPFD 229
>pdb|3KB7|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 311
Score = 82.0 bits (201), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 63/206 (30%), Positives = 100/206 (48%), Gaps = 16/206 (7%)
Query: 338 LVGKGGHSHVYRGCLPDGKELAVKILKPSEDVLK-----EFASEIEIITALHHRNIISLF 392
+GKGG + + D KE+ + P +LK + + EI I +L H++++
Sbjct: 24 FLGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFH 83
Query: 393 GFCFEDNNLLLV-YDFLSRGSLEENLHGNKKDGNAFGWTERYKVAVGVAEALDYLHNSCE 451
GF FEDN+ + V + R SL E LH +K A E + YLH +
Sbjct: 84 GF-FEDNDFVFVVLELCRRRSLLE-LHKRRK---ALTEPEARYYLRQIVLGCQYLHRN-- 136
Query: 452 QPVIHKDVKSSNILLSDDFEPQLSDFGLASWLSTSSSHLTCTDVAGTFGYLAPEYFMHGK 511
VIH+D+K N+ L++D E ++ DFGLA+ + + GT Y+APE
Sbjct: 137 -RVIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERK--KTLCGTPNYIAPEVLSKKG 193
Query: 512 VSEKIDVYAFGIVLLELLSGKKPINS 537
S ++DV++ G ++ LL GK P +
Sbjct: 194 HSFEVDVWSIGCIMYTLLVGKPPFET 219
>pdb|3C4F|A Chain A, Fgfr Tyrosine Kinase Domain In Complex With 3-(3-
Methoxybenzyl)-7-Azaindole
pdb|3C4F|B Chain B, Fgfr Tyrosine Kinase Domain In Complex With 3-(3-
Methoxybenzyl)-7-Azaindole
Length = 302
Score = 82.0 bits (201), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 51/189 (26%), Positives = 99/189 (52%), Gaps = 18/189 (9%)
Query: 357 ELAVKILK--PSEDVLKEFASEIEIITAL-HHRNIISLFGFCFEDNNLLLVYDFLSRGSL 413
++AVK+LK +E L + SE+E++ + H+NII+L G C +D L ++ ++ S+G+L
Sbjct: 47 KVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNL 106
Query: 414 EENLHGNKKDGNAFGWTERYK------------VAVGVAEALDYLHNSCEQPVIHKDVKS 461
E L + G + + + A VA ++YL + IH+D+ +
Sbjct: 107 REYLQARRPPGLEYCYNPSHNPEEQLSSKDLVSCAYQVARGMEYL---ASKKCIHRDLAA 163
Query: 462 SNILLSDDFEPQLSDFGLASWLSTSSSHLTCTDVAGTFGYLAPEYFMHGKVSEKIDVYAF 521
N+L+++D +++DFGLA + + T+ ++APE + + DV++F
Sbjct: 164 RNVLVTEDNVMKIADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSF 223
Query: 522 GIVLLELLS 530
G++L E+ +
Sbjct: 224 GVLLWEIFT 232
>pdb|2OU7|A Chain A, Structure Of The Catalytic Domain Of Human Polo-Like
Kinase 1
pdb|2OWB|A Chain A, Structure Of The Catalytic Domain Of Human Polo-Like
Kinase 1
pdb|3FC2|A Chain A, Plk1 In Complex With Bi6727
Length = 335
Score = 82.0 bits (201), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 63/206 (30%), Positives = 100/206 (48%), Gaps = 16/206 (7%)
Query: 338 LVGKGGHSHVYRGCLPDGKELAVKILKPSEDVLK-----EFASEIEIITALHHRNIISLF 392
+GKGG + + D KE+ + P +LK + + EI I +L H++++
Sbjct: 48 FLGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFH 107
Query: 393 GFCFEDNNLLLV-YDFLSRGSLEENLHGNKKDGNAFGWTERYKVAVGVAEALDYLHNSCE 451
GF FEDN+ + V + R SL E LH +K A E + YLH +
Sbjct: 108 GF-FEDNDFVFVVLELCRRRSLLE-LHKRRK---ALTEPEARYYLRQIVLGCQYLHRN-- 160
Query: 452 QPVIHKDVKSSNILLSDDFEPQLSDFGLASWLSTSSSHLTCTDVAGTFGYLAPEYFMHGK 511
VIH+D+K N+ L++D E ++ DFGLA+ + + GT Y+APE
Sbjct: 161 -RVIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERKKV--LCGTPNYIAPEVLSKKG 217
Query: 512 VSEKIDVYAFGIVLLELLSGKKPINS 537
S ++DV++ G ++ LL GK P +
Sbjct: 218 HSFEVDVWSIGCIMYTLLVGKPPFET 243
>pdb|2OIQ|A Chain A, Crystal Structure Of Chicken C-Src Kinase Domain In
Complex With The Cancer Drug Imatinib.
pdb|2OIQ|B Chain B, Crystal Structure Of Chicken C-Src Kinase Domain In
Complex With The Cancer Drug Imatinib.
pdb|3D7T|B Chain B, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3DQX|A Chain A, Chicken C-Src Kinase Domain In Complex With Atpgs
pdb|3DQX|B Chain B, Chicken C-Src Kinase Domain In Complex With Atpgs
pdb|3EN4|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp121, A Multitargeted
Kinase Inhibitor
pdb|3EN4|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp121, A Multitargeted
Kinase Inhibitor
pdb|3EN5|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp494, A Multitargeted
Kinase Inhibitor
pdb|3EN5|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp494, A Multitargeted
Kinase Inhibitor
pdb|3EN6|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp102, A Multitargeted
Kinase Inhibitor
pdb|3EN6|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp102, A Multitargeted
Kinase Inhibitor
pdb|3EN7|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With S1, A Multitargeted Kinase
Inhibitor
pdb|3EN7|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With S1, A Multitargeted Kinase
Inhibitor
pdb|3EL7|A Chain A, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 3
pdb|3EL8|A Chain A, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 5
pdb|3EL8|B Chain B, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 5
pdb|3F6X|A Chain A, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|B Chain B, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|C Chain C, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|D Chain D, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3G6G|A Chain A, Equally Potent Inhibition Of C-Src And Abl By Compounds
That Recognize Inactive Kinase Conformations
pdb|3G6G|B Chain B, Equally Potent Inhibition Of C-Src And Abl By Compounds
That Recognize Inactive Kinase Conformations
pdb|4AGW|A Chain A, Discovery Of A Small Molecule Type Ii Inhibitor Of Wild-
Type And Gatekeeper Mutants Of Bcr-Abl, Pdgfralpha, Kit,
And Src Kinases
pdb|4AGW|B Chain B, Discovery Of A Small Molecule Type Ii Inhibitor Of Wild-
Type And Gatekeeper Mutants Of Bcr-Abl, Pdgfralpha, Kit,
And Src Kinases
pdb|3UQF|A Chain A, C-Src Kinase Domain In Complex With Bki Rm-1-89
pdb|3UQF|B Chain B, C-Src Kinase Domain In Complex With Bki Rm-1-89
pdb|3UQG|A Chain A, C-Src Kinase Domain In Complex With Bumpless Bki Analog
Uw1243
pdb|3UQG|B Chain B, C-Src Kinase Domain In Complex With Bumpless Bki Analog
Uw1243
pdb|4DGG|A Chain A, C-Src Kinase Domain In Complex With Rm-1-176
pdb|4DGG|B Chain B, C-Src Kinase Domain In Complex With Rm-1-176
Length = 286
Score = 82.0 bits (201), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 52/197 (26%), Positives = 101/197 (51%), Gaps = 8/197 (4%)
Query: 339 VGKGGHSHVYRGCLPDGKELAVKILKPSEDVLKEFASEIEIITALHHRNIISLFGFCFED 398
+G+G V+ G +A+K LKP + F E +++ L H ++ L+ E+
Sbjct: 26 LGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQLYAVVSEE 85
Query: 399 NNLLLVYDFLSRGSLEENLHGNKKDGNAFGWTERYKVAVGVAEALDYLHNSCEQPVIHKD 458
+ +V +++S+GSL + L G G + +A +A + Y+ +H+D
Sbjct: 86 -PIYIVTEYMSKGSLLDFLKGEM--GKYLRLPQLVDMAAQIASGMAYVER---MNYVHRD 139
Query: 459 VKSSNILLSDDFEPQLSDFGLASWLSTSSSHLTCTDVAGTFGYLAPEYFMHGKVSEKIDV 518
++++NIL+ ++ +++DFGLA L + + + APE ++G+ + K DV
Sbjct: 140 LRAANILVGENLVCKVADFGLAR-LIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDV 198
Query: 519 YAFGIVLLELLS-GKKP 534
++FGI+L EL + G+ P
Sbjct: 199 WSFGILLTELTTKGRVP 215
>pdb|3SVV|A Chain A, Crystal Structure Of T338c C-Src Covalently Bound To
Vinylsulfonamide- Pyrazolopyrimidine 9
pdb|3SVV|B Chain B, Crystal Structure Of T338c C-Src Covalently Bound To
Vinylsulfonamide- Pyrazolopyrimidine 9
Length = 286
Score = 82.0 bits (201), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 52/197 (26%), Positives = 101/197 (51%), Gaps = 8/197 (4%)
Query: 339 VGKGGHSHVYRGCLPDGKELAVKILKPSEDVLKEFASEIEIITALHHRNIISLFGFCFED 398
+G+G V+ G +A+K LKP + F E +++ L H ++ L+ E+
Sbjct: 26 LGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQLYAVVSEE 85
Query: 399 NNLLLVYDFLSRGSLEENLHGNKKDGNAFGWTERYKVAVGVAEALDYLHNSCEQPVIHKD 458
+ +V +++S+GSL + L G G + +A +A + Y+ +H+D
Sbjct: 86 -PIYIVCEYMSKGSLLDFLKGEM--GKYLRLPQLVDMAAQIASGMAYVER---MNYVHRD 139
Query: 459 VKSSNILLSDDFEPQLSDFGLASWLSTSSSHLTCTDVAGTFGYLAPEYFMHGKVSEKIDV 518
++++NIL+ ++ +++DFGLA L + + + APE ++G+ + K DV
Sbjct: 140 LRAANILVGENLVCKVADFGLAR-LIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDV 198
Query: 519 YAFGIVLLELLS-GKKP 534
++FGI+L EL + G+ P
Sbjct: 199 WSFGILLTELTTKGRVP 215
>pdb|2RKU|A Chain A, Structure Of Plk1 In Complex With Bi2536
Length = 294
Score = 82.0 bits (201), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 61/205 (29%), Positives = 97/205 (47%), Gaps = 14/205 (6%)
Query: 338 LVGKGGHSHVYRGCLPDGKELAVKILKPSEDVLK-----EFASEIEIITALHHRNIISLF 392
+GKGG + + D KE+ + P +LK + + EI I +L H++++
Sbjct: 22 FLGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFH 81
Query: 393 GFCFEDNNLLLVYDFLSRGSLEENLHGNKKDGNAFGWTERYKVAVGVAEALDYLHNSCEQ 452
GF FEDN+ + V L R LH +K A E + YLH +
Sbjct: 82 GF-FEDNDFVFVVLELCRRRSLLELHKRRK---ALTEPEARYYLRQIVLGCQYLHRN--- 134
Query: 453 PVIHKDVKSSNILLSDDFEPQLSDFGLASWLSTSSSHLTCTDVAGTFGYLAPEYFMHGKV 512
VIH+D+K N+ L++D E ++ DFGLA+ + + GT Y+APE
Sbjct: 135 RVIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERKKV--LCGTPNYIAPEVLSKKGH 192
Query: 513 SEKIDVYAFGIVLLELLSGKKPINS 537
S ++DV++ G ++ LL GK P +
Sbjct: 193 SFEVDVWSIGCIMYTLLVGKPPFET 217
>pdb|3GQL|A Chain A, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
pdb|3GQL|B Chain B, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
pdb|3GQL|C Chain C, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
Length = 326
Score = 82.0 bits (201), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 51/189 (26%), Positives = 99/189 (52%), Gaps = 18/189 (9%)
Query: 357 ELAVKILK--PSEDVLKEFASEIEIITAL-HHRNIISLFGFCFEDNNLLLVYDFLSRGSL 413
++AVK+LK +E L + SE+E++ + H+NII+L G C +D L ++ ++ S+G+L
Sbjct: 62 KVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNL 121
Query: 414 EENLHGNKKDGNAFGWTERYK------------VAVGVAEALDYLHNSCEQPVIHKDVKS 461
E L + G + + + A VA ++YL + IH+D+ +
Sbjct: 122 REYLQARRPPGLEYCYNPSHNPEEQLSSKDLVSCAYQVARGMEYL---ASKKCIHRDLAA 178
Query: 462 SNILLSDDFEPQLSDFGLASWLSTSSSHLTCTDVAGTFGYLAPEYFMHGKVSEKIDVYAF 521
N+L+++D +++DFGLA + + T+ ++APE + + DV++F
Sbjct: 179 RNVLVTEDNVMKIADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSF 238
Query: 522 GIVLLELLS 530
G++L E+ +
Sbjct: 239 GVLLWEIFT 247
>pdb|4F1M|A Chain A, Crystal Structure Of The G1179s Roco4 Kinase Domain Bound
To Appcp From D. Discoideum
Length = 287
Score = 81.6 bits (200), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 64/214 (29%), Positives = 112/214 (52%), Gaps = 27/214 (12%)
Query: 339 VGKGGHSHVYRGCL-PDGKELAVK--ILKPSE------DVLKEFASEIEIITALHHRNII 389
+GKGG V++G L D +A+K IL SE + +EF E+ I++ L+H NI+
Sbjct: 27 IGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQREVFIMSNLNHPNIV 86
Query: 390 SLFGFCFEDNNLLLVYDFLSRGSLEENLHGNKKDGNAFGWTERYKVAVGVAEALDYLHNS 449
L+G N +V +F+ G L L + W+ + ++ + +A ++Y+ N
Sbjct: 87 KLYGLM--HNPPRMVMEFVPCGDLYHRL---LDKAHPIKWSVKLRLMLDIALGIEYMQNQ 141
Query: 450 CEQPVIHKDVKSSNILLS--DDFEP---QLSDFGLASWLSTSSSHLTCTDVAGTFGYLAP 504
P++H+D++S NI L D+ P +++DF LS S H + + + G F ++AP
Sbjct: 142 -NPPIVHRDLRSPNIFLQSLDENAPVCAKVADFS----LSQQSVH-SVSGLLGNFQWMAP 195
Query: 505 EYFMHGKVS--EKIDVYAFGIVLLELLSGKKPIN 536
E + S EK D Y+F ++L +L+G+ P +
Sbjct: 196 ETIGAEEESYTEKADTYSFAMILYTILTGEGPFD 229
>pdb|2DQ7|X Chain X, Crystal Structure Of Fyn Kinase Domain Complexed With
Staurosporine
Length = 283
Score = 81.6 bits (200), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 56/202 (27%), Positives = 101/202 (50%), Gaps = 8/202 (3%)
Query: 339 VGKGGHSHVYRGCLPDGKELAVKILKPSEDVLKEFASEIEIITALHHRNIISLFGFCFED 398
+G G V+ G ++A+K LKP + F E +I+ L H ++ L+ E+
Sbjct: 17 LGNGQFGEVWMGTWNGNTKVAIKTLKPGTMSPESFLEEAQIMKKLKHDKLVQLYAVVSEE 76
Query: 399 NNLLLVYDFLSRGSLEENLHGNKKDGNAFGWTERYKVAVGVAEALDYLHNSCEQPVIHKD 458
+ +V +++++GSL + L +G A +A VA + Y+ IH+D
Sbjct: 77 -PIYIVTEYMNKGSLLDFLKDG--EGRALKLPNLVDMAAQVAAGMAYIER---MNYIHRD 130
Query: 459 VKSSNILLSDDFEPQLSDFGLASWLSTSSSHLTCTDVAGTFGYLAPEYFMHGKVSEKIDV 518
++S+NIL+ + +++DFGLA L + + APE ++G+ + K DV
Sbjct: 131 LRSANILVGNGLICKIADFGLAR-LIEDNEXTARQGAKFPIKWTAPEAALYGRFTIKSDV 189
Query: 519 YAFGIVLLELLS-GKKPINSEN 539
++FGI+L EL++ G+ P N
Sbjct: 190 WSFGILLTELVTKGRVPYPGMN 211
>pdb|3TT0|A Chain A, Co-Structure Of Fibroblast Growth Factor Receptor 1 Kinase
Domain With
3-(2,6-Dichloro-3,
5-Dimethoxy-Phenyl)-1-{6-[4-(4-Ethyl-Piperazin-1-
Yl)-Phenylamino]-Pyrimidin-4-Yl}-1-Methyl-Urea (Bgj398)
pdb|3TT0|B Chain B, Co-Structure Of Fibroblast Growth Factor Receptor 1 Kinase
Domain With
3-(2,6-Dichloro-3,
5-Dimethoxy-Phenyl)-1-{6-[4-(4-Ethyl-Piperazin-1-
Yl)-Phenylamino]-Pyrimidin-4-Yl}-1-Methyl-Urea (Bgj398)
Length = 382
Score = 81.6 bits (200), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 51/189 (26%), Positives = 99/189 (52%), Gaps = 18/189 (9%)
Query: 357 ELAVKILK--PSEDVLKEFASEIEIITAL-HHRNIISLFGFCFEDNNLLLVYDFLSRGSL 413
++AVK+LK +E L + SE+E++ + H+NII+L G C +D L ++ ++ S+G+L
Sbjct: 103 KVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNL 162
Query: 414 EENLHGNKKDGNAFGWTERYK------------VAVGVAEALDYLHNSCEQPVIHKDVKS 461
E L + G + + + A VA ++YL + IH+D+ +
Sbjct: 163 REYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSCAYQVARGMEYL---ASKKCIHRDLAA 219
Query: 462 SNILLSDDFEPQLSDFGLASWLSTSSSHLTCTDVAGTFGYLAPEYFMHGKVSEKIDVYAF 521
N+L+++D +++DFGLA + + T+ ++APE + + DV++F
Sbjct: 220 RNVLVTEDNVMKIADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSF 279
Query: 522 GIVLLELLS 530
G++L E+ +
Sbjct: 280 GVLLWEIFT 288
>pdb|3KXX|A Chain A, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|B Chain B, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|C Chain C, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|D Chain D, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
Length = 317
Score = 81.6 bits (200), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 51/189 (26%), Positives = 99/189 (52%), Gaps = 18/189 (9%)
Query: 357 ELAVKILK--PSEDVLKEFASEIEIITAL-HHRNIISLFGFCFEDNNLLLVYDFLSRGSL 413
++AVK+LK +E L + SE+E++ + H+NII+L G C +D L ++ ++ S+G+L
Sbjct: 62 KVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNL 121
Query: 414 EENLHGNKKDGNAFGWTERYK------------VAVGVAEALDYLHNSCEQPVIHKDVKS 461
E L + G + + + A VA ++YL + IH+D+ +
Sbjct: 122 REYLQAREPPGLEYSYNPSHNPEEQLSSKDLVSCAYQVARGMEYL---ASKKCIHRDLAA 178
Query: 462 SNILLSDDFEPQLSDFGLASWLSTSSSHLTCTDVAGTFGYLAPEYFMHGKVSEKIDVYAF 521
N+L+++D +++DFGLA + + T+ ++APE + + DV++F
Sbjct: 179 RNVLVTEDNVMKIADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSF 238
Query: 522 GIVLLELLS 530
G++L E+ +
Sbjct: 239 GVLLWEIFT 247
>pdb|1YI6|A Chain A, C-Term Tail Segment Of Human Tyrosine Kinase (258-533)
pdb|1YI6|B Chain B, C-Term Tail Segment Of Human Tyrosine Kinase (258-533)
Length = 276
Score = 81.6 bits (200), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 53/200 (26%), Positives = 102/200 (51%), Gaps = 8/200 (4%)
Query: 336 EYLVGKGGHSHVYRGCLPDGKELAVKILKPSEDVLKEFASEIEIITALHHRNIISLFGFC 395
E +G+G V+ G +A+K LKP + F E +++ L H ++ L+
Sbjct: 13 EVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQLYAVV 72
Query: 396 FEDNNLLLVYDFLSRGSLEENLHGNKKDGNAFGWTERYKVAVGVAEALDYLHNSCEQPVI 455
E+ + +V +++S+GSL + L G + G + +A +A + Y+ +
Sbjct: 73 SEE-PIXIVTEYMSKGSLLDFLKG--ETGKYLRLPQLVDMAAQIASGMAYVER---MNYV 126
Query: 456 HKDVKSSNILLSDDFEPQLSDFGLASWLSTSSSHLTCTDVAGTFGYLAPEYFMHGKVSEK 515
H+D++++NIL+ ++ +++DFGLA L + + APE ++G+ + K
Sbjct: 127 HRDLRAANILVGENLVCKVADFGLAR-LIEDNEXTARQGAKFPIKWTAPEAALYGRFTIK 185
Query: 516 IDVYAFGIVLLELLS-GKKP 534
DV++FGI+L EL + G+ P
Sbjct: 186 SDVWSFGILLTELTTKGRVP 205
>pdb|2BMC|A Chain A, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|B Chain B, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|C Chain C, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|D Chain D, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|E Chain E, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|F Chain F, Aurora-2 T287d T288d Complexed With Pha-680632
Length = 306
Score = 81.6 bits (200), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 69/247 (27%), Positives = 112/247 (45%), Gaps = 23/247 (9%)
Query: 296 PLSPYNELPKELEGLQERYSSTCRLFSYQELLSATSNFLPEYLVGKGGHSHVYRGCLPDG 355
P +P N +EL Q+ S R + A +F +GKG +VY
Sbjct: 6 PSAPENNPEEELASKQKNEESKKRQW-------ALEDFEIGRPLGKGKFGNVYLAREKQS 58
Query: 356 KE-LAVKILKPSE----DVLKEFASEIEIITALHHRNIISLFGFCFEDNNLLLVYDFLSR 410
K LA+K+L ++ V + E+EI + L H NI+ L+G+ + + L+ ++
Sbjct: 59 KFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPL 118
Query: 411 GSLEENLHGNKKDGNAFGWTERYKVAVGVAEALDYLHNSCEQPVIHKDVKSSNILLSDDF 470
G++ L K F +A AL Y H+ + VIH+D+K N+LL
Sbjct: 119 GTVYRELQKLSK----FDEQRTATYITELANALSYCHS---KRVIHRDIKPENLLLGSAG 171
Query: 471 EPQLSDFGLASWLSTSSSHLTCTDVAGTFGYLAPEYFMHGKVSEKIDVYAFGIVLLELLS 530
E +++DFG + +S D+ GT YL PE EK+D+++ G++ E L
Sbjct: 172 ELKIADFGWSVHAPSSRR----DDLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLV 227
Query: 531 GKKPINS 537
GK P +
Sbjct: 228 GKPPFEA 234
>pdb|2XRU|A Chain A, Aurora-A T288e Complexed With Pha-828300
Length = 280
Score = 81.3 bits (199), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 59/204 (28%), Positives = 98/204 (48%), Gaps = 16/204 (7%)
Query: 339 VGKGGHSHVYRGCLPDGKE-LAVKILKPSE----DVLKEFASEIEIITALHHRNIISLFG 393
+GKG +VY K LA+K+L ++ V + E+EI + L H NI+ L+G
Sbjct: 16 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 75
Query: 394 FCFEDNNLLLVYDFLSRGSLEENLHGNKKDGNAFGWTERYKVAVGVAEALDYLHNSCEQP 453
+ + + L+ ++ G++ L K F +A AL Y H+ +
Sbjct: 76 YFHDATRVYLILEYAPLGTVYRELQKLSK----FDEQRTATYITELANALSYCHS---KR 128
Query: 454 VIHKDVKSSNILLSDDFEPQLSDFGLASWLSTSSSHLTCTDVAGTFGYLAPEYFMHGKVS 513
VIH+D+K N+LL E +++DFG + +S T++ GT YL PE
Sbjct: 129 VIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRR----TELCGTLDYLPPEMIEGRMHD 184
Query: 514 EKIDVYAFGIVLLELLSGKKPINS 537
EK+D+++ G++ E L GK P +
Sbjct: 185 EKVDLWSLGVLCYEFLVGKPPFEA 208
>pdb|2F4J|A Chain A, Structure Of The Kinase Domain Of An Imatinib-Resistant
Abl Mutant In Complex With The Aurora Kinase Inhibitor
Vx-680
Length = 287
Score = 81.3 bits (199), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 53/192 (27%), Positives = 99/192 (51%), Gaps = 9/192 (4%)
Query: 339 VGKGGHSHVYRGCLPD-GKELAVKILKPSEDVLKEFASEIEIITALHHRNIISLFGFCFE 397
+G G + VY G +AVK LK ++EF E ++ + H N++ L G C
Sbjct: 22 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTR 81
Query: 398 DNNLLLVYDFLSRGSLEENLH-GNKKDGNAFGWTERYKVAVGVAEALDYLHNSCEQPVIH 456
+ ++ +F++ G+L + L N+++ NA +A ++ A++YL ++ IH
Sbjct: 82 EPPFYIITEFMTYGNLLDYLRECNRQEVNA---VVLLYMATQISSAMEYLE---KKNFIH 135
Query: 457 KDVKSSNILLSDDFEPQLSDFGLASWLSTSSSHLTCTDVAGTFGYLAPEYFMHGKVSEKI 516
+D+ + N L+ ++ +++DFGL+ L T ++ + APE + K S K
Sbjct: 136 RDLAARNCLVGENHLVKVADFGLSR-LMTGDTYTAPAGAKFPIKWTAPESLAYNKFSIKS 194
Query: 517 DVYAFGIVLLEL 528
DV+AFG++L E+
Sbjct: 195 DVWAFGVLLWEI 206
>pdb|2J4Z|A Chain A, Structure Of Aurora-2 In Complex With Pha-680626
pdb|2J4Z|B Chain B, Structure Of Aurora-2 In Complex With Pha-680626
Length = 306
Score = 81.3 bits (199), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 69/247 (27%), Positives = 111/247 (44%), Gaps = 23/247 (9%)
Query: 296 PLSPYNELPKELEGLQERYSSTCRLFSYQELLSATSNFLPEYLVGKGGHSHVYRGCLPDG 355
P +P N +EL Q+ S R + A +F +GKG +VY
Sbjct: 6 PSAPENNPEEELASKQKNEESKKRQW-------ALEDFEIGRPLGKGKFGNVYLAREKQS 58
Query: 356 KE-LAVKILKPSE----DVLKEFASEIEIITALHHRNIISLFGFCFEDNNLLLVYDFLSR 410
K LA+K+L ++ V + E+EI + L H NI+ L+G+ + + L+ ++
Sbjct: 59 KFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPL 118
Query: 411 GSLEENLHGNKKDGNAFGWTERYKVAVGVAEALDYLHNSCEQPVIHKDVKSSNILLSDDF 470
G++ L K F +A AL Y H+ + VIH+D+K N+LL
Sbjct: 119 GTVYRELQKLSK----FDEQRTATYITELANALSYCHS---KRVIHRDIKPENLLLGSAG 171
Query: 471 EPQLSDFGLASWLSTSSSHLTCTDVAGTFGYLAPEYFMHGKVSEKIDVYAFGIVLLELLS 530
E +++DFG + +S C GT YL PE EK+D+++ G++ E L
Sbjct: 172 ELKIADFGWSVHAPSSRRTTLC----GTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLV 227
Query: 531 GKKPINS 537
GK P +
Sbjct: 228 GKPPFEA 234
>pdb|3OEZ|A Chain A, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain Complexed With Imatinib
pdb|3OEZ|B Chain B, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain Complexed With Imatinib
pdb|3OF0|A Chain A, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain
pdb|3OF0|B Chain B, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain
pdb|3QLF|A Chain A, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Pyrazolopyrimidine
5
pdb|3QLF|B Chain B, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Pyrazolopyrimidine
5
pdb|3QLG|A Chain A, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Dasatinib
pdb|3QLG|B Chain B, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Dasatinib
Length = 286
Score = 81.3 bits (199), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 52/200 (26%), Positives = 102/200 (51%), Gaps = 8/200 (4%)
Query: 336 EYLVGKGGHSHVYRGCLPDGKELAVKILKPSEDVLKEFASEIEIITALHHRNIISLFGFC 395
E +G+G V+ G +A+K LKP + F E +++ + H ++ L+
Sbjct: 23 EVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKIRHEKLVQLYAVV 82
Query: 396 FEDNNLLLVYDFLSRGSLEENLHGNKKDGNAFGWTERYKVAVGVAEALDYLHNSCEQPVI 455
E+ + +V +++S+GSL + L G G + +A +A + Y+ +
Sbjct: 83 SEE-PIYIVTEYMSKGSLLDFLKGEM--GKYLRLPQLVDMAAQIASGMAYVER---MNYV 136
Query: 456 HKDVKSSNILLSDDFEPQLSDFGLASWLSTSSSHLTCTDVAGTFGYLAPEYFMHGKVSEK 515
H+D++++NIL+ ++ +++DFGLA L + + + APE ++G+ + K
Sbjct: 137 HRDLRAANILVGENLVCKVADFGLAR-LIEDNEYTARQGAKFPIKWTAPEAALYGRFTIK 195
Query: 516 IDVYAFGIVLLELLS-GKKP 534
DV++FGI+L EL + G+ P
Sbjct: 196 SDVWSFGILLTELTTKGRVP 215
>pdb|3Q4Z|A Chain A, Structure Of Unphosphorylated Pak1 Kinase Domain
pdb|3Q4Z|B Chain B, Structure Of Unphosphorylated Pak1 Kinase Domain
Length = 306
Score = 81.3 bits (199), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 55/204 (26%), Positives = 104/204 (50%), Gaps = 12/204 (5%)
Query: 339 VGKGGHSHVYRGC-LPDGKELAVKILKPSEDVLKEFA-SEIEIITALHHRNIISLFGFCF 396
+G+G VY + G+E+A++ + + KE +EI ++ + NI++
Sbjct: 29 IGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVNYLDSYL 88
Query: 397 EDNNLLLVYDFLSRGSLEENLHGNKKDGNAFGWTERYKVAVGVAEALDYLHNSCEQPVIH 456
+ L +V ++L+ GSL + + D V +AL++LH++ VIH
Sbjct: 89 VGDELWVVMEYLAGGSLTDVVTETCMDEGQIA-----AVCRECLQALEFLHSN---QVIH 140
Query: 457 KDVKSSNILLSDDFEPQLSDFGLASWLSTSSSHLTCTDVAGTFGYLAPEYFMHGKVSEKI 516
+++KS NILL D +L+DFG + ++ S + + GT ++APE K+
Sbjct: 141 RNIKSDNILLGMDGSVKLTDFGFCAQITPEQSKRST--MVGTPYWMAPEVVTRKAYGPKV 198
Query: 517 DVYAFGIVLLELLSGKKPINSENP 540
D+++ GI+ +E++ G+ P +ENP
Sbjct: 199 DIWSLGIMAIEMIEGEPPYLNENP 222
>pdb|3QRJ|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain T315i
Mutant In Complex With Dcc-2036
pdb|3QRJ|B Chain B, The Crystal Structure Of Human Abl1 Kinase Domain T315i
Mutant In Complex With Dcc-2036
Length = 277
Score = 81.3 bits (199), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 55/199 (27%), Positives = 102/199 (51%), Gaps = 10/199 (5%)
Query: 339 VGKGGHSHVYRGCLPD-GKELAVKILKPSEDVLKEFASEIEIITALHHRNIISLFGFCFE 397
+G G + VY G +AVK LK ++EF E ++ + H N++ L G C
Sbjct: 26 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTR 85
Query: 398 DNNLLLVYDFLSRGSLEENLH-GNKKDGNAFGWTERYKVAVGVAEALDYLHNSCEQPVIH 456
+ ++ +F++ G+L + L N+++ NA +A ++ A++YL ++ IH
Sbjct: 86 EPPFYIIIEFMTYGNLLDYLRECNRQEVNA---VVLLYMATQISSAMEYLE---KKNFIH 139
Query: 457 KDVKSSNILLSDDFEPQLSDFGLASWLSTSSSHLTCTDVAGTFGYLAPEYFMHGKVSEKI 516
+D+ + N L+ ++ +++DFGL+ L T ++ + APE + K S K
Sbjct: 140 RDLAARNCLVGENHLVKVADFGLSR-LMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKS 198
Query: 517 DVYAFGIVLLELLS-GKKP 534
DV+AFG++L E+ + G P
Sbjct: 199 DVWAFGVLLWEIATYGMSP 217
>pdb|3DQW|A Chain A, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|B Chain B, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|C Chain C, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|D Chain D, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
Length = 286
Score = 81.3 bits (199), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 53/200 (26%), Positives = 101/200 (50%), Gaps = 8/200 (4%)
Query: 336 EYLVGKGGHSHVYRGCLPDGKELAVKILKPSEDVLKEFASEIEIITALHHRNIISLFGFC 395
E +G+G V+ G +A+K LKP + F E +++ L H ++ L+
Sbjct: 23 EVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQLYAVV 82
Query: 396 FEDNNLLLVYDFLSRGSLEENLHGNKKDGNAFGWTERYKVAVGVAEALDYLHNSCEQPVI 455
E+ + +V +++S+GSL + L G G + +A +A + Y+ +
Sbjct: 83 SEE-PIYIVIEYMSKGSLLDFLKGEM--GKYLRLPQLVDMAAQIASGMAYVER---MNYV 136
Query: 456 HKDVKSSNILLSDDFEPQLSDFGLASWLSTSSSHLTCTDVAGTFGYLAPEYFMHGKVSEK 515
H+D++++NIL+ ++ +++DFGLA L + + APE ++G+ + K
Sbjct: 137 HRDLRAANILVGENLVCKVADFGLAR-LIEDNEXTARQGAKFPIKWTAPEAALYGRFTIK 195
Query: 516 IDVYAFGIVLLELLS-GKKP 534
DV++FGI+L EL + G+ P
Sbjct: 196 SDVWSFGILLTELTTKGRVP 215
>pdb|1K9A|A Chain A, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|B Chain B, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|C Chain C, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|D Chain D, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|E Chain E, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|F Chain F, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
Length = 450
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 61/200 (30%), Positives = 105/200 (52%), Gaps = 18/200 (9%)
Query: 339 VGKGGHSHVYRGCLPDGKELAVKILKPSEDVLKEFASEIEIITALHHRNIISLFGFCFED 398
+GKG V G G ++AVK +K ++ + F +E ++T L H N++ L G E+
Sbjct: 201 IGKGEFGDVMLGDY-RGNKVAVKCIK-NDATAQAFLAEASVMTQLRHSNLVQLLGVIVEE 258
Query: 399 -NNLLLVYDFLSRGSLEENLHGNKKDGNAFGWTERYKVAVGVAEALDYLHNSCEQPVIHK 457
L +V +++++GSL + L + + G K ++ V EA++YL + +H+
Sbjct: 259 KGGLYIVTEYMAKGSLVDYLRSRGR--SVLGGDCLLKFSLDVCEAMEYLEGN---NFVHR 313
Query: 458 DVKSSNILLSDDFEPQLSDFGLASWLSTSSSHLTCTDVAGTF--GYLAPEYFMHGKVSEK 515
D+ + N+L+S+D ++SDFGL + + T G + APE K S K
Sbjct: 314 DLAARNVLVSEDNVAKVSDFGL-------TKEASSTQDTGKLPVKWTAPEALREKKFSTK 366
Query: 516 IDVYAFGIVLLELLS-GKKP 534
DV++FGI+L E+ S G+ P
Sbjct: 367 SDVWSFGILLWEIYSFGRVP 386
>pdb|3QRI|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dcc- 2036
pdb|3QRI|B Chain B, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dcc- 2036
pdb|3QRK|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dp- 987
Length = 277
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 55/199 (27%), Positives = 102/199 (51%), Gaps = 10/199 (5%)
Query: 339 VGKGGHSHVYRGCLPD-GKELAVKILKPSEDVLKEFASEIEIITALHHRNIISLFGFCFE 397
+G G + VY G +AVK LK ++EF E ++ + H N++ L G C
Sbjct: 26 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTR 85
Query: 398 DNNLLLVYDFLSRGSLEENLH-GNKKDGNAFGWTERYKVAVGVAEALDYLHNSCEQPVIH 456
+ ++ +F++ G+L + L N+++ NA +A ++ A++YL ++ IH
Sbjct: 86 EPPFYIITEFMTYGNLLDYLRECNRQEVNA---VVLLYMATQISSAMEYLE---KKNFIH 139
Query: 457 KDVKSSNILLSDDFEPQLSDFGLASWLSTSSSHLTCTDVAGTFGYLAPEYFMHGKVSEKI 516
+D+ + N L+ ++ +++DFGL+ L T ++ + APE + K S K
Sbjct: 140 RDLAARNCLVGENHLVKVADFGLSR-LMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKS 198
Query: 517 DVYAFGIVLLELLS-GKKP 534
DV+AFG++L E+ + G P
Sbjct: 199 DVWAFGVLLWEIATYGMSP 217
>pdb|2C30|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 6
Length = 321
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 63/227 (27%), Positives = 115/227 (50%), Gaps = 13/227 (5%)
Query: 355 GKELAVKILKPSEDVLKEFA-SEIEIITALHHRNIISLFGFCFEDNNLLLVYDFLSRGSL 413
G+++AVK++ + +E +E+ I+ H N++ ++ L ++ +FL G+L
Sbjct: 70 GRQVAVKMMDLRKQQRRELLFNEVVIMRDYQHFNVVEMYKSYLVGEELWVLMEFLQGGAL 129
Query: 414 EENLHGNKKDGNAFGWTERYKVAVGVAEALDYLHNSCEQPVIHKDVKSSNILLSDDFEPQ 473
+ + + + V V +AL YLH Q VIH+D+KS +ILL+ D +
Sbjct: 130 TDIVSQVRLNEEQIA-----TVCEAVLQALAYLHA---QGVIHRDIKSDSILLTLDGRVK 181
Query: 474 LSDFGLASWLSTSSSHLTCTDVAGTFGYLAPEYFMHGKVSEKIDVYAFGIVLLELLSGKK 533
LSDFG + +S + GT ++APE + ++D+++ GI+++E++ G+
Sbjct: 182 LSDFGFCAQISKDVPKR--KXLVGTPYWMAPEVISRSLYATEVDIWSLGIMVIEMVDGEP 239
Query: 534 PINSENP-KGQESLVMWAKPILKDG-KVSQLLDPSLDTDYDNDQIER 578
P S++P + + L P LK+ KVS +L L+ D ER
Sbjct: 240 PYFSDSPVQAMKRLRDSPPPKLKNSHKVSPVLRDFLERMLVRDPQER 286
>pdb|2HYY|A Chain A, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|B Chain B, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|C Chain C, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|D Chain D, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HZ4|A Chain A, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
pdb|2HZ4|B Chain B, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
pdb|2HZ4|C Chain C, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
Length = 273
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 55/199 (27%), Positives = 102/199 (51%), Gaps = 10/199 (5%)
Query: 339 VGKGGHSHVYRGCLPD-GKELAVKILKPSEDVLKEFASEIEIITALHHRNIISLFGFCFE 397
+G G + VY G +AVK LK ++EF E ++ + H N++ L G C
Sbjct: 21 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTR 80
Query: 398 DNNLLLVYDFLSRGSLEENLH-GNKKDGNAFGWTERYKVAVGVAEALDYLHNSCEQPVIH 456
+ ++ +F++ G+L + L N+++ NA +A ++ A++YL ++ IH
Sbjct: 81 EPPFYIITEFMTYGNLLDYLRECNRQEVNA---VVLLYMATQISSAMEYLE---KKNFIH 134
Query: 457 KDVKSSNILLSDDFEPQLSDFGLASWLSTSSSHLTCTDVAGTFGYLAPEYFMHGKVSEKI 516
+D+ + N L+ ++ +++DFGL+ L T ++ + APE + K S K
Sbjct: 135 RDLAARNCLVGENHLVKVADFGLSR-LMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKS 193
Query: 517 DVYAFGIVLLELLS-GKKP 534
DV+AFG++L E+ + G P
Sbjct: 194 DVWAFGVLLWEIATYGMSP 212
>pdb|2G2F|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2F|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2H|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2H|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2I|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2I|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
Length = 287
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 55/199 (27%), Positives = 102/199 (51%), Gaps = 10/199 (5%)
Query: 339 VGKGGHSHVYRGCLPD-GKELAVKILKPSEDVLKEFASEIEIITALHHRNIISLFGFCFE 397
+G G + VY G +AVK LK ++EF E ++ + H N++ L G C
Sbjct: 23 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTR 82
Query: 398 DNNLLLVYDFLSRGSLEENLH-GNKKDGNAFGWTERYKVAVGVAEALDYLHNSCEQPVIH 456
+ ++ +F++ G+L + L N+++ NA +A ++ A++YL ++ IH
Sbjct: 83 EPPFYIITEFMTYGNLLDYLRECNRQEVNA---VVLLYMATQISSAMEYLE---KKNFIH 136
Query: 457 KDVKSSNILLSDDFEPQLSDFGLASWLSTSSSHLTCTDVAGTFGYLAPEYFMHGKVSEKI 516
+D+ + N L+ ++ +++DFGL+ L T ++ + APE + K S K
Sbjct: 137 RDLAARNCLVGENHLVKVADFGLSR-LMTGDTYTAPAGAKFPIKWTAPESLAYNKFSIKS 195
Query: 517 DVYAFGIVLLELLS-GKKP 534
DV+AFG++L E+ + G P
Sbjct: 196 DVWAFGVLLWEIATYGMSP 214
>pdb|3D7U|A Chain A, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3D7U|C Chain C, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 263
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 61/198 (30%), Positives = 104/198 (52%), Gaps = 14/198 (7%)
Query: 339 VGKGGHSHVYRGCLPDGKELAVKILKPSEDVLKEFASEIEIITALHHRNIISLFGFCFED 398
+GKG V G G ++AVK +K ++ + F +E ++T L H N++ L G E+
Sbjct: 14 IGKGEFGDVMLGDY-RGNKVAVKCIK-NDATAQAFLAEASVMTQLRHSNLVQLLGVIVEE 71
Query: 399 -NNLLLVYDFLSRGSLEENLHGNKKDGNAFGWTERYKVAVGVAEALDYLHNSCEQPVIHK 457
L +V +++++GSL + L + + G K ++ V EA++YL + +H+
Sbjct: 72 KGGLYIVTEYMAKGSLVDYLRSRGR--SVLGGDCLLKFSLDVCEAMEYLEGN---NFVHR 126
Query: 458 DVKSSNILLSDDFEPQLSDFGLASWLSTSSSHLTCTDVAGTFGYLAPEYFMHGKVSEKID 517
D+ + N+L+S+D ++SDFGL T + T + APE K S K D
Sbjct: 127 DLAARNVLVSEDNVAKVSDFGL-----TKEASSTQDTGKLPVKWTAPEALREKKFSTKSD 181
Query: 518 VYAFGIVLLELLS-GKKP 534
V++FGI+L E+ S G+ P
Sbjct: 182 VWSFGILLWEIYSFGRVP 199
>pdb|4FIE|A Chain A, Full-Length Human Pak4
pdb|4FIE|B Chain B, Full-Length Human Pak4
Length = 423
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 66/234 (28%), Positives = 113/234 (48%), Gaps = 13/234 (5%)
Query: 355 GKELAVKILKPSEDVLKEFA-SEIEIITALHHRNIISLFGFCFEDNNLLLVYDFLSRGSL 413
GK +AVK + + +E +E+ I+ H N++ ++ + L +V +FL G+L
Sbjct: 176 GKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYLVGDELWVVMEFLEGGAL 235
Query: 414 EENLHGNKKDGNAFGWTERYKVAVGVAEALDYLHNSCEQPVIHKDVKSSNILLSDDFEPQ 473
+ + + + V + V +AL LH Q VIH+D+KS +ILL+ D +
Sbjct: 236 TDIVTHTRMNEEQIA-----AVCLAVLQALSVLH---AQGVIHRDIKSDSILLTHDGRVK 287
Query: 474 LSDFGLASWLSTSSSHLTCTDVAGTFGYLAPEYFMHGKVSEKIDVYAFGIVLLELLSGKK 533
LSDFG + +S + GT ++APE ++D+++ GI+++E++ G+
Sbjct: 288 LSDFGFCAQVSKEVPRRKX--LVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEP 345
Query: 534 PINSENP-KGQESLVMWAKPILKD-GKVSQLLDPSLDTDYDNDQIERMVLAATL 585
P +E P K + + P LK+ KVS L LD D +R A L
Sbjct: 346 PYFNEPPLKAMKMIRDNLPPRLKNLHKVSPSLKGFLDRLLVRDPAQRATAAELL 399
>pdb|3QBN|A Chain A, Structure Of Human Aurora A In Complex With A
Diaminopyrimidine
Length = 281
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 59/204 (28%), Positives = 98/204 (48%), Gaps = 16/204 (7%)
Query: 339 VGKGGHSHVYRGCLPDGKE-LAVKILKPSE----DVLKEFASEIEIITALHHRNIISLFG 393
+GKG +VY K LA+K+L ++ V + E+EI + L H NI+ L+G
Sbjct: 17 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 76
Query: 394 FCFEDNNLLLVYDFLSRGSLEENLHGNKKDGNAFGWTERYKVAVGVAEALDYLHNSCEQP 453
+ + + L+ ++ G++ L K F +A AL Y H+ +
Sbjct: 77 YFHDATRVYLILEYAPLGTVYRELQKLSK----FDEQRTATYITELANALSYCHS---KR 129
Query: 454 VIHKDVKSSNILLSDDFEPQLSDFGLASWLSTSSSHLTCTDVAGTFGYLAPEYFMHGKVS 513
VIH+D+K N+LL E +++DFG + +S T ++GT YL PE
Sbjct: 130 VIHRDIKPENLLLGSAGELKIADFGWSCHAPSSRR----TTLSGTLDYLPPEMIEGRMHD 185
Query: 514 EKIDVYAFGIVLLELLSGKKPINS 537
EK+D+++ G++ E L GK P +
Sbjct: 186 EKVDLWSLGVLCYEFLVGKPPFEA 209
>pdb|2PTK|A Chain A, Chicken Src Tyrosine Kinase
Length = 453
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 52/200 (26%), Positives = 101/200 (50%), Gaps = 8/200 (4%)
Query: 336 EYLVGKGGHSHVYRGCLPDGKELAVKILKPSEDVLKEFASEIEIITALHHRNIISLFGFC 395
E +G+G V+ G +A+K LKP + F E +++ L H ++ L+
Sbjct: 190 EVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGNMSPEAFLQEAQVMKKLRHEKLVQLYAVV 249
Query: 396 FEDNNLLLVYDFLSRGSLEENLHGNKKDGNAFGWTERYKVAVGVAEALDYLHNSCEQPVI 455
E+ + +V +++S+GSL + L G G + +A +A + Y+ +
Sbjct: 250 SEE-PIYIVTEYMSKGSLLDFLKGEM--GKYLRLPQLVDMAAQIASGMAYVER---MNYV 303
Query: 456 HKDVKSSNILLSDDFEPQLSDFGLASWLSTSSSHLTCTDVAGTFGYLAPEYFMHGKVSEK 515
H+D++++NIL+ ++ +++DFGL L + + + APE ++G+ + K
Sbjct: 304 HRDLRAANILVGENLVCKVADFGLGR-LIEDNEYTARQGAKFPIKWTAPEAALYGRFTIK 362
Query: 516 IDVYAFGIVLLELLS-GKKP 534
DV++FGI+L EL + G+ P
Sbjct: 363 SDVWSFGILLTELTTKGRVP 382
>pdb|2E2B|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Inno-406
pdb|2E2B|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Inno-406
Length = 293
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 55/199 (27%), Positives = 102/199 (51%), Gaps = 10/199 (5%)
Query: 339 VGKGGHSHVYRGCLPD-GKELAVKILKPSEDVLKEFASEIEIITALHHRNIISLFGFCFE 397
+G G + VY G +AVK LK ++EF E ++ + H N++ L G C
Sbjct: 26 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTR 85
Query: 398 DNNLLLVYDFLSRGSLEENLH-GNKKDGNAFGWTERYKVAVGVAEALDYLHNSCEQPVIH 456
+ ++ +F++ G+L + L N+++ NA +A ++ A++YL ++ IH
Sbjct: 86 EPPFYIITEFMTYGNLLDYLRECNRQEVNA---VVLLYMATQISSAMEYLE---KKNFIH 139
Query: 457 KDVKSSNILLSDDFEPQLSDFGLASWLSTSSSHLTCTDVAGTFGYLAPEYFMHGKVSEKI 516
+D+ + N L+ ++ +++DFGL+ L T ++ + APE + K S K
Sbjct: 140 RDLAARNCLVGENHLVKVADFGLSR-LMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKS 198
Query: 517 DVYAFGIVLLELLS-GKKP 534
DV+AFG++L E+ + G P
Sbjct: 199 DVWAFGVLLWEIATYGMSP 217
>pdb|3COH|A Chain A, Crystal Structure Of Aurora-A In Complex With A
Pentacyclic Inhibitor
pdb|3COH|B Chain B, Crystal Structure Of Aurora-A In Complex With A
Pentacyclic Inhibitor
Length = 268
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 59/204 (28%), Positives = 97/204 (47%), Gaps = 16/204 (7%)
Query: 339 VGKGGHSHVYRGCLPDGKE-LAVKILKPSE----DVLKEFASEIEIITALHHRNIISLFG 393
+GKG +VY + K LA+K+L ++ V + E+EI + L H NI+ L+G
Sbjct: 16 LGKGKFGNVYLAREKNSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 75
Query: 394 FCFEDNNLLLVYDFLSRGSLEENLHGNKKDGNAFGWTERYKVAVGVAEALDYLHNSCEQP 453
+ + + L+ ++ G++ L K F +A AL Y H+ +
Sbjct: 76 YFHDSTRVYLILEYAPLGTVYRELQKLSK----FDEQRTATYITELANALSYCHS---KK 128
Query: 454 VIHKDVKSSNILLSDDFEPQLSDFGLASWLSTSSSHLTCTDVAGTFGYLAPEYFMHGKVS 513
VIH+D+K N+LL E +++DFG + +S C GT YL PE
Sbjct: 129 VIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRAALC----GTLDYLPPEMIEGRMHD 184
Query: 514 EKIDVYAFGIVLLELLSGKKPINS 537
EK+D+++ G++ E L GK P +
Sbjct: 185 EKVDLWSLGVLCYEFLVGKPPFEA 208
>pdb|1BYG|A Chain A, Kinase Domain Of Human C-Terminal Src Kinase (Csk) In
Complex With Inhibitor Staurosporine
Length = 278
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 61/200 (30%), Positives = 105/200 (52%), Gaps = 18/200 (9%)
Query: 339 VGKGGHSHVYRGCLPDGKELAVKILKPSEDVLKEFASEIEIITALHHRNIISLFGFCFED 398
+GKG V G G ++AVK +K ++ + F +E ++T L H N++ L G E+
Sbjct: 29 IGKGEFGDVMLGDY-RGNKVAVKCIK-NDATAQAFLAEASVMTQLRHSNLVQLLGVIVEE 86
Query: 399 -NNLLLVYDFLSRGSLEENLHGNKKDGNAFGWTERYKVAVGVAEALDYLHNSCEQPVIHK 457
L +V +++++GSL + L + + G K ++ V EA++YL + +H+
Sbjct: 87 KGGLYIVTEYMAKGSLVDYLRSRGR--SVLGGDCLLKFSLDVCEAMEYLEGN---NFVHR 141
Query: 458 DVKSSNILLSDDFEPQLSDFGLASWLSTSSSHLTCTDVAGTF--GYLAPEYFMHGKVSEK 515
D+ + N+L+S+D ++SDFGL + + T G + APE K S K
Sbjct: 142 DLAARNVLVSEDNVAKVSDFGL-------TKEASSTQDTGKLPVKWTAPEALREKKFSTK 194
Query: 516 IDVYAFGIVLLELLS-GKKP 534
DV++FGI+L E+ S G+ P
Sbjct: 195 SDVWSFGILLWEIYSFGRVP 214
>pdb|1MUO|A Chain A, Crystal Structure Of Aurora-2, An Oncogenic Serine-
Threonine Kinase
Length = 297
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 59/204 (28%), Positives = 96/204 (47%), Gaps = 16/204 (7%)
Query: 339 VGKGGHSHVYRGCLPDGKE-LAVKILKPSE----DVLKEFASEIEIITALHHRNIISLFG 393
+GKG +VY K LA+K+L ++ V + E+EI + L H NI+ L+G
Sbjct: 33 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 92
Query: 394 FCFEDNNLLLVYDFLSRGSLEENLHGNKKDGNAFGWTERYKVAVGVAEALDYLHNSCEQP 453
+ + + L+ ++ G++ L K F +A AL Y H+ +
Sbjct: 93 YFHDATRVYLILEYAPLGTVYRELQKLSK----FDEQRTATYITELANALSYCHS---KR 145
Query: 454 VIHKDVKSSNILLSDDFEPQLSDFGLASWLSTSSSHLTCTDVAGTFGYLAPEYFMHGKVS 513
VIH+D+K N+LL E +++DFG + +S C GT YL PE
Sbjct: 146 VIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTTLC----GTLDYLPPEMIEGRMHD 201
Query: 514 EKIDVYAFGIVLLELLSGKKPINS 537
EK+D+++ G++ E L GK P +
Sbjct: 202 EKVDLWSLGVLCYEFLVGKPPFEA 225
>pdb|2QQ7|A Chain A, Crystal Structure Of Drug Resistant Src Kinase Domain With
Irreversible Inhibitor
pdb|2QQ7|B Chain B, Crystal Structure Of Drug Resistant Src Kinase Domain With
Irreversible Inhibitor
pdb|2QI8|A Chain A, Crystal Structure Of Drug Resistant Src Kinase Domain
pdb|2QI8|B Chain B, Crystal Structure Of Drug Resistant Src Kinase Domain
pdb|3F3W|A Chain A, Drug Resistant Csrc Kinase Domain In Complex With
Inhibitor Rl45 (Type Ii)
pdb|3F3W|B Chain B, Drug Resistant Csrc Kinase Domain In Complex With
Inhibitor Rl45 (Type Ii)
pdb|3LOK|A Chain A, Drug Resistant Csrc Kinase Domain In Complex With Covalent
Inhibitor Pd168393
pdb|3LOK|B Chain B, Drug Resistant Csrc Kinase Domain In Complex With Covalent
Inhibitor Pd168393
Length = 286
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 51/197 (25%), Positives = 100/197 (50%), Gaps = 8/197 (4%)
Query: 339 VGKGGHSHVYRGCLPDGKELAVKILKPSEDVLKEFASEIEIITALHHRNIISLFGFCFED 398
+G+G V+ G +A+K LKP + F E +++ L H ++ L+ E+
Sbjct: 26 LGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQLYAVVSEE 85
Query: 399 NNLLLVYDFLSRGSLEENLHGNKKDGNAFGWTERYKVAVGVAEALDYLHNSCEQPVIHKD 458
+ +V +++S+G L + L G G + +A +A + Y+ +H+D
Sbjct: 86 -PIYIVMEYMSKGCLLDFLKGEM--GKYLRLPQLVDMAAQIASGMAYVER---MNYVHRD 139
Query: 459 VKSSNILLSDDFEPQLSDFGLASWLSTSSSHLTCTDVAGTFGYLAPEYFMHGKVSEKIDV 518
++++NIL+ ++ +++DFGLA L + + + APE ++G+ + K DV
Sbjct: 140 LRAANILVGENLVCKVADFGLAR-LIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDV 198
Query: 519 YAFGIVLLELLS-GKKP 534
++FGI+L EL + G+ P
Sbjct: 199 WSFGILLTELTTKGRVP 215
>pdb|3GEQ|A Chain A, Structural Basis For The Chemical Rescue Of Src Kinase
Activity
pdb|3GEQ|B Chain B, Structural Basis For The Chemical Rescue Of Src Kinase
Activity
Length = 286
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 53/200 (26%), Positives = 101/200 (50%), Gaps = 8/200 (4%)
Query: 336 EYLVGKGGHSHVYRGCLPDGKELAVKILKPSEDVLKEFASEIEIITALHHRNIISLFGFC 395
E +G+G V+ G +A+K LKP + F E +++ L H ++ L+
Sbjct: 23 EVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQLYAVV 82
Query: 396 FEDNNLLLVYDFLSRGSLEENLHGNKKDGNAFGWTERYKVAVGVAEALDYLHNSCEQPVI 455
E+ + +V +++S+GSL + L G G + +A +A + Y+ +
Sbjct: 83 SEE-PIYIVTEYMSKGSLLDFLKGEM--GKYLRLPQLVDMAAQIASGMAYVER---MNYV 136
Query: 456 HKDVKSSNILLSDDFEPQLSDFGLASWLSTSSSHLTCTDVAGTFGYLAPEYFMHGKVSEK 515
H+D+ ++NIL+ ++ +++DFGLA L + + + APE ++G+ + K
Sbjct: 137 HRDLAAANILVGENLVCKVADFGLAR-LIEDNEYTARQGAKFPIKWTAPEAALYGRFTIK 195
Query: 516 IDVYAFGIVLLELLS-GKKP 534
DV++FGI+L EL + G+ P
Sbjct: 196 SDVWSFGILLTELTTKGRVP 215
>pdb|2PSQ|A Chain A, Crystal Structure Of Unphosphorylated Unactivated Wild
Type Fgf Receptor 2 (Fgfr2) Kinase Domain
pdb|2PSQ|B Chain B, Crystal Structure Of Unphosphorylated Unactivated Wild
Type Fgf Receptor 2 (Fgfr2) Kinase Domain
Length = 370
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 48/188 (25%), Positives = 98/188 (52%), Gaps = 18/188 (9%)
Query: 358 LAVKILK--PSEDVLKEFASEIEIITAL-HHRNIISLFGFCFEDNNLLLVYDFLSRGSLE 414
+AVK+LK +E L + SE+E++ + H+NII+L G C +D L ++ ++ S+G+L
Sbjct: 116 VAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLR 175
Query: 415 ENLHGNKKDGNAFGW------------TERYKVAVGVAEALDYLHNSCEQPVIHKDVKSS 462
E L + G + + + +A ++YL Q IH+D+ +
Sbjct: 176 EYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYL---ASQKCIHRDLAAR 232
Query: 463 NILLSDDFEPQLSDFGLASWLSTSSSHLTCTDVAGTFGYLAPEYFMHGKVSEKIDVYAFG 522
N+L++++ +++DFGLA ++ + T+ ++APE + + DV++FG
Sbjct: 233 NVLVTENNVMKIADFGLARDINNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFG 292
Query: 523 IVLLELLS 530
+++ E+ +
Sbjct: 293 VLMWEIFT 300
>pdb|2HZI|A Chain A, Abl Kinase Domain In Complex With Pd180970
pdb|2HZI|B Chain B, Abl Kinase Domain In Complex With Pd180970
pdb|3CS9|A Chain A, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|B Chain B, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|C Chain C, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|D Chain D, Human Abl Kinase In Complex With Nilotinib
Length = 277
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 55/199 (27%), Positives = 102/199 (51%), Gaps = 10/199 (5%)
Query: 339 VGKGGHSHVYRGCLPD-GKELAVKILKPSEDVLKEFASEIEIITALHHRNIISLFGFCFE 397
+G G + VY G +AVK LK ++EF E ++ + H N++ L G C
Sbjct: 25 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTR 84
Query: 398 DNNLLLVYDFLSRGSLEENLH-GNKKDGNAFGWTERYKVAVGVAEALDYLHNSCEQPVIH 456
+ ++ +F++ G+L + L N+++ NA +A ++ A++YL ++ IH
Sbjct: 85 EPPFYIITEFMTYGNLLDYLRECNRQEVNA---VVLLYMATQISSAMEYLE---KKNFIH 138
Query: 457 KDVKSSNILLSDDFEPQLSDFGLASWLSTSSSHLTCTDVAGTFGYLAPEYFMHGKVSEKI 516
+D+ + N L+ ++ +++DFGL+ L T ++ + APE + K S K
Sbjct: 139 RDLAARNCLVGENHLVKVADFGLSR-LMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKS 197
Query: 517 DVYAFGIVLLELLS-GKKP 534
DV+AFG++L E+ + G P
Sbjct: 198 DVWAFGVLLWEIATYGMSP 216
>pdb|2HIW|A Chain A, Crystal Structure Of Inactive Conformation Abl Kinase
Catalytic Domain Complexed With Type Ii Inhibitor
pdb|2HIW|B Chain B, Crystal Structure Of Inactive Conformation Abl Kinase
Catalytic Domain Complexed With Type Ii Inhibitor
Length = 287
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 55/199 (27%), Positives = 102/199 (51%), Gaps = 10/199 (5%)
Query: 339 VGKGGHSHVYRGCLPD-GKELAVKILKPSEDVLKEFASEIEIITALHHRNIISLFGFCFE 397
+G G + VY G +AVK LK ++EF E ++ + H N++ L G C
Sbjct: 23 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTR 82
Query: 398 DNNLLLVYDFLSRGSLEENLH-GNKKDGNAFGWTERYKVAVGVAEALDYLHNSCEQPVIH 456
+ ++ +F++ G+L + L N+++ NA +A ++ A++YL ++ IH
Sbjct: 83 EPPFYIITEFMTYGNLLDYLRECNRQEVNA---VVLLYMATQISSAMEYLE---KKNFIH 136
Query: 457 KDVKSSNILLSDDFEPQLSDFGLASWLSTSSSHLTCTDVAGTFGYLAPEYFMHGKVSEKI 516
+D+ + N L+ ++ +++DFGL+ L T ++ + APE + K S K
Sbjct: 137 RDLAARNCLVGENHLVKVADFGLSR-LMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKS 195
Query: 517 DVYAFGIVLLELLS-GKKP 534
DV+AFG++L E+ + G P
Sbjct: 196 DVWAFGVLLWEIATYGMSP 214
>pdb|1OL5|A Chain A, Structure Of Aurora-A 122-403, Phosphorylated On Thr287,
Thr288 And Bound To Tpx2 1-43
pdb|1OL7|A Chain A, Structure Of Human Aurora-A 122-403 Phosphorylated On
Thr287, Thr288
Length = 282
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 59/204 (28%), Positives = 96/204 (47%), Gaps = 16/204 (7%)
Query: 339 VGKGGHSHVYRGCLPDGKE-LAVKILKPSE----DVLKEFASEIEIITALHHRNIISLFG 393
+GKG +VY K LA+K+L ++ V + E+EI + L H NI+ L+G
Sbjct: 18 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 77
Query: 394 FCFEDNNLLLVYDFLSRGSLEENLHGNKKDGNAFGWTERYKVAVGVAEALDYLHNSCEQP 453
+ + + L+ ++ G++ L K F +A AL Y H+ +
Sbjct: 78 YFHDATRVYLILEYAPLGTVYRELQKLSK----FDEQRTATYITELANALSYCHS---KR 130
Query: 454 VIHKDVKSSNILLSDDFEPQLSDFGLASWLSTSSSHLTCTDVAGTFGYLAPEYFMHGKVS 513
VIH+D+K N+LL E +++DFG + +S C GT YL PE
Sbjct: 131 VIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRXXLC----GTLDYLPPEMIEGRMHD 186
Query: 514 EKIDVYAFGIVLLELLSGKKPINS 537
EK+D+++ G++ E L GK P +
Sbjct: 187 EKVDLWSLGVLCYEFLVGKPPFEA 210
>pdb|2WTV|A Chain A, Aurora-A Inhibitor Structure
pdb|2WTV|B Chain B, Aurora-A Inhibitor Structure
pdb|2WTV|C Chain C, Aurora-A Inhibitor Structure
pdb|2WTV|D Chain D, Aurora-A Inhibitor Structure
Length = 285
Score = 80.5 bits (197), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 59/204 (28%), Positives = 97/204 (47%), Gaps = 16/204 (7%)
Query: 339 VGKGGHSHVYRGCLPDGKE-LAVKILKPSE----DVLKEFASEIEIITALHHRNIISLFG 393
+GKG +VY K LA+K+L ++ V + E+EI + L H NI+ L+G
Sbjct: 21 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 80
Query: 394 FCFEDNNLLLVYDFLSRGSLEENLHGNKKDGNAFGWTERYKVAVGVAEALDYLHNSCEQP 453
+ + + L+ ++ RG + + L K F +A AL Y H+ +
Sbjct: 81 YFHDATRVYLILEYAPRGEVYKELQKLSK----FDEQRTATYITELANALSYCHS---KR 133
Query: 454 VIHKDVKSSNILLSDDFEPQLSDFGLASWLSTSSSHLTCTDVAGTFGYLAPEYFMHGKVS 513
VIH+D+K N+LL E +++DFG + +S + GT YL PE
Sbjct: 134 VIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRR----XXLXGTLDYLPPEMIEGRMHD 189
Query: 514 EKIDVYAFGIVLLELLSGKKPINS 537
EK+D+++ G++ E L GK P +
Sbjct: 190 EKVDLWSLGVLCYEFLVGKPPFEA 213
>pdb|2HZ0|A Chain A, Abl Kinase Domain In Complex With Nvp-Aeg082
pdb|2HZ0|B Chain B, Abl Kinase Domain In Complex With Nvp-Aeg082
Length = 270
Score = 80.5 bits (197), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 55/199 (27%), Positives = 102/199 (51%), Gaps = 10/199 (5%)
Query: 339 VGKGGHSHVYRGCLPD-GKELAVKILKPSEDVLKEFASEIEIITALHHRNIISLFGFCFE 397
+G G + VY G +AVK LK ++EF E ++ + H N++ L G C
Sbjct: 21 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTR 80
Query: 398 DNNLLLVYDFLSRGSLEENLH-GNKKDGNAFGWTERYKVAVGVAEALDYLHNSCEQPVIH 456
+ ++ +F++ G+L + L N+++ NA +A ++ A++YL ++ IH
Sbjct: 81 EPPFYIITEFMTYGNLLDYLRECNRQEVNA---VVLLYMATQISSAMEYLE---KKNFIH 134
Query: 457 KDVKSSNILLSDDFEPQLSDFGLASWLSTSSSHLTCTDVAGTFGYLAPEYFMHGKVSEKI 516
+D+ + N L+ ++ +++DFGL+ L T ++ + APE + K S K
Sbjct: 135 RDLAARNCLVGENHLVKVADFGLSR-LMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKS 193
Query: 517 DVYAFGIVLLELLS-GKKP 534
DV+AFG++L E+ + G P
Sbjct: 194 DVWAFGVLLWEIATYGMSP 212
>pdb|2XNG|A Chain A, Structure Of Aurora-A Bound To A Selective Imidazopyrazine
Inhibitor
Length = 283
Score = 80.5 bits (197), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 59/204 (28%), Positives = 97/204 (47%), Gaps = 16/204 (7%)
Query: 339 VGKGGHSHVYRGCLPDGKE-LAVKILKPSE----DVLKEFASEIEIITALHHRNIISLFG 393
+GKG +VY K LA+K+L ++ V + E+EI + L H NI+ L+G
Sbjct: 19 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 78
Query: 394 FCFEDNNLLLVYDFLSRGSLEENLHGNKKDGNAFGWTERYKVAVGVAEALDYLHNSCEQP 453
+ + + L+ ++ G++ L K F +A AL Y H+ +
Sbjct: 79 YFHDATRVYLILEYAPLGTVYRELQKLSK----FDEQRTATYITELANALSYCHS---KR 131
Query: 454 VIHKDVKSSNILLSDDFEPQLSDFGLASWLSTSSSHLTCTDVAGTFGYLAPEYFMHGKVS 513
VIH+D+K N+LL E +++DFG + +S T + GT YL PE
Sbjct: 132 VIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRR----TTLCGTLDYLPPEMIEGRMHD 187
Query: 514 EKIDVYAFGIVLLELLSGKKPINS 537
EK+D+++ G++ E L GK P +
Sbjct: 188 EKVDLWSLGVLCYEFLVGKPPFEA 211
>pdb|4AF3|A Chain A, Human Aurora B Kinase In Complex With Incenp And Vx-680
Length = 292
Score = 80.5 bits (197), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 65/207 (31%), Positives = 101/207 (48%), Gaps = 22/207 (10%)
Query: 339 VGKGGHSHVYRGCLPDGKE----LAVKILKPS----EDVLKEFASEIEIITALHHRNIIS 390
+GKG +VY L K+ +A+K+L S E V + EIEI LHH NI+
Sbjct: 31 LGKGKFGNVY---LAREKKSHFIVALKVLFKSQIEKEGVEHQLRREIEIQAHLHHPNILR 87
Query: 391 LFGFCFEDNNLLLVYDFLSRGSLEENLHGNKKDGNAFGWTERYKVAVGVAEALDYLHNSC 450
L+ + ++ + L+ ++ RG L + L + F + +A+AL Y H
Sbjct: 88 LYNYFYDRRRIYLILEYAPRGELYKEL----QKSCTFDEQRTATIMEELADALMYCHG-- 141
Query: 451 EQPVIHKDVKSSNILLSDDFEPQLSDFGLASWLSTSSSHLTCTDVAGTFGYLAPEYFMHG 510
+ VIH+D+K N+LL E +++DFG W S + L + GT YL PE
Sbjct: 142 -KKVIHRDIKPENLLLGLKGELKIADFG---W-SVHAPSLRRKTMCGTLDYLPPEMIEGR 196
Query: 511 KVSEKIDVYAFGIVLLELLSGKKPINS 537
+EK+D++ G++ ELL G P S
Sbjct: 197 MHNEKVDLWCIGVLCYELLVGNPPFES 223
>pdb|2G1T|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|C Chain C, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|D Chain D, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|3UE4|A Chain A, Structural And Spectroscopic Analysis Of The Kinase
Inhibitor Bosutinib Binding To The Abl Tyrosine Kinase
Domain
pdb|3UE4|B Chain B, Structural And Spectroscopic Analysis Of The Kinase
Inhibitor Bosutinib Binding To The Abl Tyrosine Kinase
Domain
Length = 287
Score = 80.5 bits (197), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 55/199 (27%), Positives = 102/199 (51%), Gaps = 10/199 (5%)
Query: 339 VGKGGHSHVYRGCLPD-GKELAVKILKPSEDVLKEFASEIEIITALHHRNIISLFGFCFE 397
+G G + VY G +AVK LK ++EF E ++ + H N++ L G C
Sbjct: 23 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTR 82
Query: 398 DNNLLLVYDFLSRGSLEENLH-GNKKDGNAFGWTERYKVAVGVAEALDYLHNSCEQPVIH 456
+ ++ +F++ G+L + L N+++ NA +A ++ A++YL ++ IH
Sbjct: 83 EPPFYIITEFMTYGNLLDYLRECNRQEVNA---VVLLYMATQISSAMEYLE---KKNFIH 136
Query: 457 KDVKSSNILLSDDFEPQLSDFGLASWLSTSSSHLTCTDVAGTFGYLAPEYFMHGKVSEKI 516
+D+ + N L+ ++ +++DFGL+ L T ++ + APE + K S K
Sbjct: 137 RDLAARNCLVGENHLVKVADFGLSR-LMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKS 195
Query: 517 DVYAFGIVLLELLS-GKKP 534
DV+AFG++L E+ + G P
Sbjct: 196 DVWAFGVLLWEIATYGMSP 214
>pdb|1UU9|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-3
Length = 286
Score = 80.5 bits (197), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 63/208 (30%), Positives = 103/208 (49%), Gaps = 14/208 (6%)
Query: 338 LVGKGGHSHVYRGC-LPDGKELAVKILKPSEDVLKE-----FASEIEIITALHHRNIISL 391
++G+G S V L +E A+KIL+ ++KE E ++++ L H + L
Sbjct: 16 ILGEGSFSTVVLARELATSREYAIKILE-KRHIIKENKVPYVTRERDVMSRLDHPFFVKL 74
Query: 392 FGFCFEDNNLLLVYDFLSRGSLEENLHGNKKDGNAFGWTERYKVAVGVAEALDYLHNSCE 451
+ F F+D+ L Y LS E L +K G+ R+ A + AL+YLH
Sbjct: 75 Y-FTFQDDEKL--YFGLSYAKNGELLKYIRKIGSFDETCTRFYTA-EIVSALEYLHG--- 127
Query: 452 QPVIHKDVKSSNILLSDDFEPQLSDFGLASWLSTSSSHLTCTDVAGTFGYLAPEYFMHGK 511
+ +IH+D+K NILL++D Q++DFG A LS S GT Y++PE
Sbjct: 128 KGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKS 187
Query: 512 VSEKIDVYAFGIVLLELLSGKKPINSEN 539
+ D++A G ++ +L++G P + N
Sbjct: 188 ACKSSDLWALGCIIYQLVAGLPPFRAGN 215
>pdb|1H1W|A Chain A, High Resolution Crystal Structure Of The Human Pdk1
Catalytic Domain
pdb|1UVR|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-8
Length = 289
Score = 80.5 bits (197), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 63/208 (30%), Positives = 103/208 (49%), Gaps = 14/208 (6%)
Query: 338 LVGKGGHSHVYRGC-LPDGKELAVKILKPSEDVLKE-----FASEIEIITALHHRNIISL 391
++G+G S V L +E A+KIL+ ++KE E ++++ L H + L
Sbjct: 17 ILGEGSFSTVVLARELATSREYAIKILE-KRHIIKENKVPYVTRERDVMSRLDHPFFVKL 75
Query: 392 FGFCFEDNNLLLVYDFLSRGSLEENLHGNKKDGNAFGWTERYKVAVGVAEALDYLHNSCE 451
+ F F+D+ L Y LS E L +K G+ R+ A + AL+YLH
Sbjct: 76 Y-FTFQDDEKL--YFGLSYAKNGELLKYIRKIGSFDETCTRFYTA-EIVSALEYLHG--- 128
Query: 452 QPVIHKDVKSSNILLSDDFEPQLSDFGLASWLSTSSSHLTCTDVAGTFGYLAPEYFMHGK 511
+ +IH+D+K NILL++D Q++DFG A LS S GT Y++PE
Sbjct: 129 KGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKS 188
Query: 512 VSEKIDVYAFGIVLLELLSGKKPINSEN 539
+ D++A G ++ +L++G P + N
Sbjct: 189 ACKSSDLWALGCIIYQLVAGLPPFRAGN 216
>pdb|4E6D|A Chain A, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 7
pdb|4E6D|B Chain B, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 7
pdb|4E6Q|A Chain A, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 12
pdb|4E6Q|B Chain B, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 12
Length = 298
Score = 80.5 bits (197), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 56/180 (31%), Positives = 92/180 (51%), Gaps = 10/180 (5%)
Query: 355 GKELAVKILKPS-EDVLKEFASEIEIITALHHRNIISLFGFCFE--DNNLLLVYDFLSRG 411
G+ +AVK L+ S E+ L++F EIEI+ +L H NI+ G C+ NL L+ +FL G
Sbjct: 42 GEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEFLPYG 101
Query: 412 SLEENLHGNKKDGNAFGWTERYKVAVGVAEALDYLHNSCEQPVIHKDVKSSNILLSDDFE 471
SL E L +K+ + + + + ++YL + IH+D+ + NIL+ ++
Sbjct: 102 SLREYLQKHKERIDHIKLLQ---YTSQICKGMEYLGT---KRYIHRDLATRNILVENENR 155
Query: 472 PQLSDFGLASWLSTSSSHLTCTDVAGT-FGYLAPEYFMHGKVSEKIDVYAFGIVLLELLS 530
++ DFGL L + + + APE K S DV++FG+VL EL +
Sbjct: 156 VKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFT 215
>pdb|3PYY|A Chain A, Discovery And Characterization Of A Cell-Permeable,
Small-Molecule C- Abl Kinase Activator That Binds To The
Myristoyl Binding Site
pdb|3PYY|B Chain B, Discovery And Characterization Of A Cell-Permeable,
Small-Molecule C- Abl Kinase Activator That Binds To The
Myristoyl Binding Site
Length = 298
Score = 80.5 bits (197), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 55/199 (27%), Positives = 102/199 (51%), Gaps = 10/199 (5%)
Query: 339 VGKGGHSHVYRGCLPD-GKELAVKILKPSEDVLKEFASEIEIITALHHRNIISLFGFCFE 397
+G G + VY G +AVK LK ++EF E ++ + H N++ L G C
Sbjct: 34 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTR 93
Query: 398 DNNLLLVYDFLSRGSLEENLH-GNKKDGNAFGWTERYKVAVGVAEALDYLHNSCEQPVIH 456
+ ++ +F++ G+L + L N+++ NA +A ++ A++YL ++ IH
Sbjct: 94 EPPFYIITEFMTYGNLLDYLRECNRQEVNA---VVLLYMATQISSAMEYLE---KKNFIH 147
Query: 457 KDVKSSNILLSDDFEPQLSDFGLASWLSTSSSHLTCTDVAGTFGYLAPEYFMHGKVSEKI 516
+D+ + N L+ ++ +++DFGL+ L T ++ + APE + K S K
Sbjct: 148 RDLAARNCLVGENHLVKVADFGLSR-LMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKS 206
Query: 517 DVYAFGIVLLELLS-GKKP 534
DV+AFG++L E+ + G P
Sbjct: 207 DVWAFGVLLWEIATYGMSP 225
>pdb|3UNZ|A Chain A, Aurora A In Complex With Rpm1679
pdb|3UNZ|B Chain B, Aurora A In Complex With Rpm1679
pdb|3UO4|A Chain A, Aurora A In Complex With Rpm1680
pdb|3UO5|A Chain A, Aurora A In Complex With Yl1-038-31
pdb|3UO6|A Chain A, Aurora A In Complex With Yl5-083
pdb|3UO6|B Chain B, Aurora A In Complex With Yl5-083
pdb|3UOD|A Chain A, Aurora A In Complex With Rpm1693
pdb|3UOH|A Chain A, Aurora A In Complex With Rpm1722
pdb|3UOH|B Chain B, Aurora A In Complex With Rpm1722
pdb|3UOJ|A Chain A, Aurora A In Complex With Rpm1715
pdb|3UOJ|B Chain B, Aurora A In Complex With Rpm1715
pdb|3UOK|A Chain A, Aurora A In Complex With Yl5-81-1
pdb|3UOK|B Chain B, Aurora A In Complex With Yl5-81-1
pdb|3UOL|A Chain A, Aurora A In Complex With So2-162
pdb|3UOL|B Chain B, Aurora A In Complex With So2-162
pdb|3UP2|A Chain A, Aurora A In Complex With Rpm1686
pdb|3UP7|A Chain A, Aurora A In Complex With Yl1-038-09
pdb|4DEA|A Chain A, Aurora A In Complex With Yl1-038-18
pdb|4DEB|A Chain A, Aurora A In Complex With Rk2-17-01
pdb|4DED|A Chain A, Aurora A In Complex With Yl1-038-21
pdb|4DEE|A Chain A, Aurora A In Complex With Adp
Length = 279
Score = 80.5 bits (197), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 59/204 (28%), Positives = 96/204 (47%), Gaps = 16/204 (7%)
Query: 339 VGKGGHSHVYRGCLPDGKE-LAVKILKPSE----DVLKEFASEIEIITALHHRNIISLFG 393
+GKG +VY K LA+K+L ++ V + E+EI + L H NI+ L+G
Sbjct: 17 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 76
Query: 394 FCFEDNNLLLVYDFLSRGSLEENLHGNKKDGNAFGWTERYKVAVGVAEALDYLHNSCEQP 453
+ + + L+ ++ G++ L K F +A AL Y H+ +
Sbjct: 77 YFHDATRVYLILEYAPLGTVYRELQKLSK----FDEQRTATYITELANALSYCHS---KR 129
Query: 454 VIHKDVKSSNILLSDDFEPQLSDFGLASWLSTSSSHLTCTDVAGTFGYLAPEYFMHGKVS 513
VIH+D+K N+LL E +++DFG + +S C GT YL PE
Sbjct: 130 VIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRDTLC----GTLDYLPPEMIEGRMHD 185
Query: 514 EKIDVYAFGIVLLELLSGKKPINS 537
EK+D+++ G++ E L GK P +
Sbjct: 186 EKVDLWSLGVLCYEFLVGKPPFEA 209
>pdb|2HWO|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor
pdb|2HWO|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor
pdb|2HWP|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor Pd168393
pdb|2HWP|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor Pd168393
pdb|2QLQ|A Chain A, Crystal Structure Of Src Kinase Domain With Covalent
Inhibitor Rl3
pdb|2QLQ|B Chain B, Crystal Structure Of Src Kinase Domain With Covalent
Inhibitor Rl3
pdb|3F3T|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl38 (Type
Iii)
pdb|3F3T|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl38 (Type
Iii)
pdb|3F3U|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl37 (Type
Iii)
pdb|3F3U|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl37 (Type
Iii)
pdb|3F3V|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl45 (Type
Ii)
pdb|3F3V|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl45 (Type
Ii)
pdb|3G5D|A Chain A, Kinase Domain Of Csrc In Complex With Dasatinib
pdb|3G5D|B Chain B, Kinase Domain Of Csrc In Complex With Dasatinib
pdb|3TZ7|A Chain A, Kinase Domain Of Csrc In Complex With Rl103
pdb|3TZ7|B Chain B, Kinase Domain Of Csrc In Complex With Rl103
pdb|3TZ8|A Chain A, Kinase Domain Of Csrc In Complex With Rl104
pdb|3TZ8|B Chain B, Kinase Domain Of Csrc In Complex With Rl104
pdb|3TZ9|A Chain A, Kinase Domain Of Csrc In Complex With Rl130
pdb|3TZ9|B Chain B, Kinase Domain Of Csrc In Complex With Rl130
Length = 286
Score = 80.5 bits (197), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 51/197 (25%), Positives = 100/197 (50%), Gaps = 8/197 (4%)
Query: 339 VGKGGHSHVYRGCLPDGKELAVKILKPSEDVLKEFASEIEIITALHHRNIISLFGFCFED 398
+G+G V+ G +A+K LKP + F E +++ L H ++ L+ E+
Sbjct: 26 LGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQLYAVVSEE 85
Query: 399 NNLLLVYDFLSRGSLEENLHGNKKDGNAFGWTERYKVAVGVAEALDYLHNSCEQPVIHKD 458
+ +V +++S+G L + L G G + +A +A + Y+ +H+D
Sbjct: 86 -PIYIVTEYMSKGCLLDFLKGEM--GKYLRLPQLVDMAAQIASGMAYVER---MNYVHRD 139
Query: 459 VKSSNILLSDDFEPQLSDFGLASWLSTSSSHLTCTDVAGTFGYLAPEYFMHGKVSEKIDV 518
++++NIL+ ++ +++DFGLA L + + + APE ++G+ + K DV
Sbjct: 140 LRAANILVGENLVCKVADFGLAR-LIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDV 198
Query: 519 YAFGIVLLELLS-GKKP 534
++FGI+L EL + G+ P
Sbjct: 199 WSFGILLTELTTKGRVP 215
>pdb|2J50|A Chain A, Structure Of Aurora-2 In Complex With Pha-739358
pdb|2J50|B Chain B, Structure Of Aurora-2 In Complex With Pha-739358
Length = 280
Score = 80.5 bits (197), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 59/204 (28%), Positives = 97/204 (47%), Gaps = 16/204 (7%)
Query: 339 VGKGGHSHVYRGCLPDGKE-LAVKILKPSE----DVLKEFASEIEIITALHHRNIISLFG 393
+GKG +VY K LA+K+L ++ V + E+EI + L H NI+ L+G
Sbjct: 16 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 75
Query: 394 FCFEDNNLLLVYDFLSRGSLEENLHGNKKDGNAFGWTERYKVAVGVAEALDYLHNSCEQP 453
+ + + L+ ++ G++ L K F +A AL Y H+ +
Sbjct: 76 YFHDATRVYLILEYAPLGTVYRELQKLSK----FDEQRTATYITELANALSYCHS---KR 128
Query: 454 VIHKDVKSSNILLSDDFEPQLSDFGLASWLSTSSSHLTCTDVAGTFGYLAPEYFMHGKVS 513
VIH+D+K N+LL E +++DFG + +S T + GT YL PE
Sbjct: 129 VIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRR----TTLCGTLDYLPPEMIEGRMHD 184
Query: 514 EKIDVYAFGIVLLELLSGKKPINS 537
EK+D+++ G++ E L GK P +
Sbjct: 185 EKVDLWSLGVLCYEFLVGKPPFEA 208
>pdb|2PZP|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K526e Mutation Responsible For
Crouzon Syndrome
pdb|2PZP|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K526e Mutation Responsible For
Crouzon Syndrome
Length = 324
Score = 80.5 bits (197), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 48/188 (25%), Positives = 99/188 (52%), Gaps = 18/188 (9%)
Query: 358 LAVKILK--PSEDVLKEFASEIEIITAL-HHRNIISLFGFCFEDNNLLLVYDFLSRGSLE 414
+AVK+LK +E+ L + SE+E++ + H+NII+L G C +D L ++ ++ S+G+L
Sbjct: 70 VAVKMLKDDATEEDLSDLVSEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLR 129
Query: 415 ENLHGNKKDGNAFGW------------TERYKVAVGVAEALDYLHNSCEQPVIHKDVKSS 462
E L + G + + + +A ++YL Q IH+D+ +
Sbjct: 130 EYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYL---ASQKCIHRDLAAR 186
Query: 463 NILLSDDFEPQLSDFGLASWLSTSSSHLTCTDVAGTFGYLAPEYFMHGKVSEKIDVYAFG 522
N+L++++ +++DFGLA ++ + T+ ++APE + + DV++FG
Sbjct: 187 NVLVTENNVMKIADFGLARDINNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFG 246
Query: 523 IVLLELLS 530
+++ E+ +
Sbjct: 247 VLMWEIFT 254
>pdb|2X6D|A Chain A, Aurora-A Bound To An Inhibitor
pdb|2X6E|A Chain A, Aurora-A Bound To An Inhibitor
Length = 285
Score = 80.5 bits (197), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 59/204 (28%), Positives = 97/204 (47%), Gaps = 16/204 (7%)
Query: 339 VGKGGHSHVYRGCLPDGKE-LAVKILKPSE----DVLKEFASEIEIITALHHRNIISLFG 393
+GKG +VY K LA+K+L ++ V + E+EI + L H NI+ L+G
Sbjct: 21 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 80
Query: 394 FCFEDNNLLLVYDFLSRGSLEENLHGNKKDGNAFGWTERYKVAVGVAEALDYLHNSCEQP 453
+ + + L+ ++ G++ L K F +A AL Y H+ +
Sbjct: 81 YFHDATRVYLILEYAPLGTVYRELQKLSK----FDEQRTATYITELANALSYCHS---KR 133
Query: 454 VIHKDVKSSNILLSDDFEPQLSDFGLASWLSTSSSHLTCTDVAGTFGYLAPEYFMHGKVS 513
VIH+D+K N+LL E +++DFG + +S T + GT YL PE
Sbjct: 134 VIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRR----TTLCGTLDYLPPEMIEGRMHD 189
Query: 514 EKIDVYAFGIVLLELLSGKKPINS 537
EK+D+++ G++ E L GK P +
Sbjct: 190 EKVDLWSLGVLCYEFLVGKPPFEA 213
>pdb|2DWB|A Chain A, Aurora-A Kinase Complexed With Amppnp
Length = 285
Score = 80.1 bits (196), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 59/204 (28%), Positives = 97/204 (47%), Gaps = 16/204 (7%)
Query: 339 VGKGGHSHVYRGCLPDGKE-LAVKILKPSE----DVLKEFASEIEIITALHHRNIISLFG 393
+GKG +VY K LA+K+L ++ V + E+EI + L H NI+ L+G
Sbjct: 21 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 80
Query: 394 FCFEDNNLLLVYDFLSRGSLEENLHGNKKDGNAFGWTERYKVAVGVAEALDYLHNSCEQP 453
+ + + L+ ++ G++ L K F +A AL Y H+ +
Sbjct: 81 YFHDATRVYLILEYAPLGTVYRELQKLSK----FDEQRTATYITELANALSYCHS---KR 133
Query: 454 VIHKDVKSSNILLSDDFEPQLSDFGLASWLSTSSSHLTCTDVAGTFGYLAPEYFMHGKVS 513
VIH+D+K N+LL E +++DFG + +S T + GT YL PE
Sbjct: 134 VIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRR----TTLCGTLDYLPPEXIEGRXHD 189
Query: 514 EKIDVYAFGIVLLELLSGKKPINS 537
EK+D+++ G++ E L GK P +
Sbjct: 190 EKVDLWSLGVLCYEFLVGKPPFEA 213
>pdb|3NUS|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment8
pdb|3NUU|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment11
pdb|3NUY|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment17
Length = 286
Score = 80.1 bits (196), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 63/208 (30%), Positives = 103/208 (49%), Gaps = 14/208 (6%)
Query: 338 LVGKGGHSHVYRGC-LPDGKELAVKILKPSEDVLKE-----FASEIEIITALHHRNIISL 391
++G+G S V L +E A+KIL+ ++KE E ++++ L H + L
Sbjct: 15 ILGEGSFSTVVLARELATSREYAIKILE-KRHIIKENKVPYVTRERDVMSRLDHPFFVKL 73
Query: 392 FGFCFEDNNLLLVYDFLSRGSLEENLHGNKKDGNAFGWTERYKVAVGVAEALDYLHNSCE 451
+ F F+D+ L Y LS E L +K G+ R+ A + AL+YLH
Sbjct: 74 Y-FTFQDDEKL--YFGLSYAKNGELLKYIRKIGSFDETCTRFYTA-EIVSALEYLHG--- 126
Query: 452 QPVIHKDVKSSNILLSDDFEPQLSDFGLASWLSTSSSHLTCTDVAGTFGYLAPEYFMHGK 511
+ +IH+D+K NILL++D Q++DFG A LS S GT Y++PE
Sbjct: 127 KGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKS 186
Query: 512 VSEKIDVYAFGIVLLELLSGKKPINSEN 539
+ D++A G ++ +L++G P + N
Sbjct: 187 ACKSSDLWALGCIIYQLVAGLPPFRAGN 214
>pdb|3A4O|X Chain X, Lyn Kinase Domain
Length = 286
Score = 80.1 bits (196), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 49/197 (24%), Positives = 101/197 (51%), Gaps = 7/197 (3%)
Query: 339 VGKGGHSHVYRGCLPDGKELAVKILKPSEDVLKEFASEIEIITALHHRNIISLFGFCFED 398
+G G V+ G + ++AVK LKP ++ F E ++ L H ++ L+ +
Sbjct: 21 LGAGQFGEVWMGYYNNSTKVAVKTLKPGTMSVQAFLEEANLMKTLQHDKLVRLYAVVTRE 80
Query: 399 NNLLLVYDFLSRGSLEENLHGNKKDGNAFGWTERYKVAVGVAEALDYLHNSCEQPVIHKD 458
+ ++ +++++GSL + L + +G + + +AE + Y+ + IH+D
Sbjct: 81 EPIYIITEYMAKGSLLDFLKSD--EGGKVLLPKLIDFSAQIAEGMAYIER---KNYIHRD 135
Query: 459 VKSSNILLSDDFEPQLSDFGLASWLSTSSSHLTCTDVAGTFGYLAPEYFMHGKVSEKIDV 518
++++N+L+S+ +++DFGLA + + + + APE G + K DV
Sbjct: 136 LRAANVLVSESLMCKIADFGLAR-VIEDNEYTAREGAKFPIKWTAPEAINFGCFTIKSDV 194
Query: 519 YAFGIVLLELLS-GKKP 534
++FGI+L E+++ GK P
Sbjct: 195 WSFGILLYEIVTYGKIP 211
>pdb|1YOL|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Cgp77675
pdb|1YOL|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Cgp77675
Length = 283
Score = 80.1 bits (196), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 50/197 (25%), Positives = 102/197 (51%), Gaps = 8/197 (4%)
Query: 339 VGKGGHSHVYRGCLPDGKELAVKILKPSEDVLKEFASEIEIITALHHRNIISLFGFCFED 398
+G+G V+ G +A+K LKP + F E +++ L H ++ L+ E+
Sbjct: 23 LGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQLYAVVSEE 82
Query: 399 NNLLLVYDFLSRGSLEENLHGNKKDGNAFGWTERYKVAVGVAEALDYLHNSCEQPVIHKD 458
+ +V +++++GSL + L G + G + ++ +A + Y+ +H+D
Sbjct: 83 -PIYIVTEYMNKGSLLDFLKG--ETGKYLRLPQLVDMSAQIASGMAYVER---MNYVHRD 136
Query: 459 VKSSNILLSDDFEPQLSDFGLASWLSTSSSHLTCTDVAGTFGYLAPEYFMHGKVSEKIDV 518
++++NIL+ ++ +++DFGLA L + + + APE ++G+ + K DV
Sbjct: 137 LRAANILVGENLVCKVADFGLAR-LIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDV 195
Query: 519 YAFGIVLLELLS-GKKP 534
++FGI+L EL + G+ P
Sbjct: 196 WSFGILLTELTTKGRVP 212
>pdb|2R7B|A Chain A, Crystal Structure Of The Phosphoinositide-Dependent
Kinase- 1 (Pdk-1)catalytic Domain Bound To A
Dibenzonaphthyridine Inhibitor
pdb|3ION|A Chain A, Pdk1 In Complex With Compound 8h
Length = 312
Score = 80.1 bits (196), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 63/208 (30%), Positives = 103/208 (49%), Gaps = 14/208 (6%)
Query: 338 LVGKGGHSHVYRGC-LPDGKELAVKILKPSEDVLKE-----FASEIEIITALHHRNIISL 391
++G+G S V L +E A+KIL+ ++KE E ++++ L H + L
Sbjct: 40 ILGEGSFSTVVLARELATSREYAIKILE-KRHIIKENKVPYVTRERDVMSRLDHPFFVKL 98
Query: 392 FGFCFEDNNLLLVYDFLSRGSLEENLHGNKKDGNAFGWTERYKVAVGVAEALDYLHNSCE 451
+ F F+D+ L Y LS E L +K G+ R+ A + AL+YLH
Sbjct: 99 Y-FTFQDDEKL--YFGLSYAKNGELLKYIRKIGSFDETCTRFYTA-EIVSALEYLHG--- 151
Query: 452 QPVIHKDVKSSNILLSDDFEPQLSDFGLASWLSTSSSHLTCTDVAGTFGYLAPEYFMHGK 511
+ +IH+D+K NILL++D Q++DFG A LS S GT Y++PE
Sbjct: 152 KGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANSFVGTAQYVSPELLTEKS 211
Query: 512 VSEKIDVYAFGIVLLELLSGKKPINSEN 539
+ D++A G ++ +L++G P + N
Sbjct: 212 ACKSSDLWALGCIIYQLVAGLPPFRAGN 239
>pdb|2Q0N|A Chain A, Structure Of Human P21 Activating Kinase 4 (Pak4) In
Complex With A Consensus Peptide
Length = 301
Score = 80.1 bits (196), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 66/234 (28%), Positives = 113/234 (48%), Gaps = 13/234 (5%)
Query: 355 GKELAVKILKPSEDVLKEFA-SEIEIITALHHRNIISLFGFCFEDNNLLLVYDFLSRGSL 413
GK +AVK + + +E +E+ I+ H N++ ++ + L +V +FL G+L
Sbjct: 54 GKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYLVGDELWVVMEFLEGGAL 113
Query: 414 EENLHGNKKDGNAFGWTERYKVAVGVAEALDYLHNSCEQPVIHKDVKSSNILLSDDFEPQ 473
+ + + + V + V +AL LH Q VIH+D+KS +ILL+ D +
Sbjct: 114 TDIVTHTRMNEEQIA-----AVCLAVLQALSVLH---AQGVIHRDIKSDSILLTHDGRVK 165
Query: 474 LSDFGLASWLSTSSSHLTCTDVAGTFGYLAPEYFMHGKVSEKIDVYAFGIVLLELLSGKK 533
LSDFG + +S + GT ++APE ++D+++ GI+++E++ G+
Sbjct: 166 LSDFGFCAQVSKEVPRRKX--LVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEP 223
Query: 534 PINSENP-KGQESLVMWAKPILKD-GKVSQLLDPSLDTDYDNDQIERMVLAATL 585
P +E P K + + P LK+ KVS L LD D +R A L
Sbjct: 224 PYFNEPPLKAMKMIRDNLPPRLKNLHKVSPSLKGFLDRLLVRDPAQRATAAELL 277
>pdb|1Z5M|A Chain A, Crystal Structure Of
N1-[3-[[5-bromo-2-[[3-[(1-pyrrolidinylcarbonyl)
Amino]phenyl]amino]-4-pyrimidinyl]amino]propyl]-2,2-
Dimethylpropanediamide Complexed With Human Pdk1
pdb|2PE0|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
5-Hydroxy-3-[1-(1h-Pyrrol-2-Yl)-Eth-(Z)-Ylidene]-1,
3-Dihydro- Indol-2-One Complex
pdb|2PE1|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
{2-Oxo-3-[1-(1h-Pyrrol-2-Yl)-Eth-(Z)-Ylidene]-2,
3-Dihydro-1h- Indol-5-Yl}-Urea {bx-517} Complex
pdb|2PE2|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
3-{5-[2-Oxo-5-Ureido-1,
2-Dihydro-Indol-(3z)-Ylidenemethyl]-1h-
Pyrrol-3-Yl}-N-(2-Piperidin-1-Yl-Ethyl)-Benzamide
Complex
Length = 286
Score = 80.1 bits (196), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 63/208 (30%), Positives = 103/208 (49%), Gaps = 14/208 (6%)
Query: 338 LVGKGGHSHVYRGC-LPDGKELAVKILKPSEDVLKE-----FASEIEIITALHHRNIISL 391
++G+G S V L +E A+KIL+ ++KE E ++++ L H + L
Sbjct: 14 ILGEGSFSTVVLARELATSREYAIKILE-KRHIIKENKVPYVTRERDVMSRLDHPFFVKL 72
Query: 392 FGFCFEDNNLLLVYDFLSRGSLEENLHGNKKDGNAFGWTERYKVAVGVAEALDYLHNSCE 451
+ F F+D+ L Y LS E L +K G+ R+ A + AL+YLH
Sbjct: 73 Y-FTFQDDEKL--YFGLSYAKNGELLKYIRKIGSFDETCTRFYTA-EIVSALEYLHG--- 125
Query: 452 QPVIHKDVKSSNILLSDDFEPQLSDFGLASWLSTSSSHLTCTDVAGTFGYLAPEYFMHGK 511
+ +IH+D+K NILL++D Q++DFG A LS S GT Y++PE
Sbjct: 126 KGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKS 185
Query: 512 VSEKIDVYAFGIVLLELLSGKKPINSEN 539
+ D++A G ++ +L++G P + N
Sbjct: 186 ACKSSDLWALGCIIYQLVAGLPPFRAGN 213
>pdb|4FIF|A Chain A, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIF|B Chain B, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIG|A Chain A, Catalytic Domain Of Human Pak4
pdb|4FIG|B Chain B, Catalytic Domain Of Human Pak4
pdb|4FIH|A Chain A, Catalytic Domain Of Human Pak4 With Qkftglprqw Peptide
pdb|4FII|A Chain A, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIJ|A Chain A, Catalytic Domain Of Human Pak4
Length = 346
Score = 80.1 bits (196), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 66/234 (28%), Positives = 113/234 (48%), Gaps = 13/234 (5%)
Query: 355 GKELAVKILKPSEDVLKEFA-SEIEIITALHHRNIISLFGFCFEDNNLLLVYDFLSRGSL 413
GK +AVK + + +E +E+ I+ H N++ ++ + L +V +FL G+L
Sbjct: 99 GKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYLVGDELWVVMEFLEGGAL 158
Query: 414 EENLHGNKKDGNAFGWTERYKVAVGVAEALDYLHNSCEQPVIHKDVKSSNILLSDDFEPQ 473
+ + + + V + V +AL LH Q VIH+D+KS +ILL+ D +
Sbjct: 159 TDIVTHTRMNEEQIA-----AVCLAVLQALSVLH---AQGVIHRDIKSDSILLTHDGRVK 210
Query: 474 LSDFGLASWLSTSSSHLTCTDVAGTFGYLAPEYFMHGKVSEKIDVYAFGIVLLELLSGKK 533
LSDFG + +S + GT ++APE ++D+++ GI+++E++ G+
Sbjct: 211 LSDFGFCAQVSKEVPRRKX--LVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEP 268
Query: 534 PINSENP-KGQESLVMWAKPILKD-GKVSQLLDPSLDTDYDNDQIERMVLAATL 585
P +E P K + + P LK+ KVS L LD D +R A L
Sbjct: 269 PYFNEPPLKAMKMIRDNLPPRLKNLHKVSPSLKGFLDRLLVRDPAQRATAAELL 322
>pdb|3NRM|A Chain A, Imidazo[1,2-A]pyrazine-Based Aurora Kinase Inhibitors
Length = 283
Score = 80.1 bits (196), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 59/204 (28%), Positives = 96/204 (47%), Gaps = 16/204 (7%)
Query: 339 VGKGGHSHVYRGCLPDGKE-LAVKILKPSE----DVLKEFASEIEIITALHHRNIISLFG 393
+GKG +VY K LA+K+L ++ V + E+EI + L H NI+ L+G
Sbjct: 19 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 78
Query: 394 FCFEDNNLLLVYDFLSRGSLEENLHGNKKDGNAFGWTERYKVAVGVAEALDYLHNSCEQP 453
+ + + L+ ++ G++ L K F +A AL Y H+ +
Sbjct: 79 YFHDATRVYLILEYAPLGTVYRELQKLSK----FDEQRTATYITELANALSYCHS---KR 131
Query: 454 VIHKDVKSSNILLSDDFEPQLSDFGLASWLSTSSSHLTCTDVAGTFGYLAPEYFMHGKVS 513
VIH+D+K N+LL E +++DFG + +S C GT YL PE
Sbjct: 132 VIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRAALC----GTLDYLPPEMIEGRMHD 187
Query: 514 EKIDVYAFGIVLLELLSGKKPINS 537
EK+D+++ G++ E L GK P +
Sbjct: 188 EKVDLWSLGVLCYEFLVGKPPFEA 211
>pdb|3RWP|A Chain A, Discovery Of A Novel, Potent And Selective Inhibitor Of 3-
Phosphoinositide Dependent Kinase (Pdk1)
Length = 311
Score = 80.1 bits (196), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 63/208 (30%), Positives = 103/208 (49%), Gaps = 14/208 (6%)
Query: 338 LVGKGGHSHVYRGC-LPDGKELAVKILKPSEDVLKE-----FASEIEIITALHHRNIISL 391
++G+G S V L +E A+KIL+ ++KE E ++++ L H + L
Sbjct: 39 ILGEGSFSTVVLARELATSREYAIKILE-KRHIIKENKVPYVTRERDVMSRLDHPFFVKL 97
Query: 392 FGFCFEDNNLLLVYDFLSRGSLEENLHGNKKDGNAFGWTERYKVAVGVAEALDYLHNSCE 451
+ F F+D+ L Y LS E L +K G+ R+ A + AL+YLH
Sbjct: 98 Y-FTFQDDEKL--YFGLSYAKNGELLKYIRKIGSFDETCTRFYTA-EIVSALEYLHG--- 150
Query: 452 QPVIHKDVKSSNILLSDDFEPQLSDFGLASWLSTSSSHLTCTDVAGTFGYLAPEYFMHGK 511
+ +IH+D+K NILL++D Q++DFG A LS S GT Y++PE
Sbjct: 151 KGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKS 210
Query: 512 VSEKIDVYAFGIVLLELLSGKKPINSEN 539
+ D++A G ++ +L++G P + N
Sbjct: 211 ACKSSDLWALGCIIYQLVAGLPPFRAGN 238
>pdb|2CDZ|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With Cgp74514a
pdb|2J0I|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4
Length = 303
Score = 80.1 bits (196), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 66/234 (28%), Positives = 113/234 (48%), Gaps = 13/234 (5%)
Query: 355 GKELAVKILKPSEDVLKEFA-SEIEIITALHHRNIISLFGFCFEDNNLLLVYDFLSRGSL 413
GK +AVK + + +E +E+ I+ H N++ ++ + L +V +FL G+L
Sbjct: 56 GKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYLVGDELWVVMEFLEGGAL 115
Query: 414 EENLHGNKKDGNAFGWTERYKVAVGVAEALDYLHNSCEQPVIHKDVKSSNILLSDDFEPQ 473
+ + + + V + V +AL LH Q VIH+D+KS +ILL+ D +
Sbjct: 116 TDIVTHTRMNEEQIA-----AVCLAVLQALSVLH---AQGVIHRDIKSDSILLTHDGRVK 167
Query: 474 LSDFGLASWLSTSSSHLTCTDVAGTFGYLAPEYFMHGKVSEKIDVYAFGIVLLELLSGKK 533
LSDFG + +S + GT ++APE ++D+++ GI+++E++ G+
Sbjct: 168 LSDFGFCAQVSKEVPRRKX--LVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEP 225
Query: 534 PINSENP-KGQESLVMWAKPILKD-GKVSQLLDPSLDTDYDNDQIERMVLAATL 585
P +E P K + + P LK+ KVS L LD D +R A L
Sbjct: 226 PYFNEPPLKAMKMIRDNLPPRLKNLHKVSPSLKGFLDRLLVRDPAQRATAAELL 279
>pdb|2PZ5|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549t Mutation Responsible For
Pfeiffer Syndrome
pdb|2PZ5|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549t Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 80.1 bits (196), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 48/188 (25%), Positives = 98/188 (52%), Gaps = 18/188 (9%)
Query: 358 LAVKILK--PSEDVLKEFASEIEIITAL-HHRNIISLFGFCFEDNNLLLVYDFLSRGSLE 414
+AVK+LK +E L + SE+E++ + H+NII+L G C +D L ++ ++ S+G+L
Sbjct: 70 VAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIITLLGACTQDGPLYVIVEYASKGNLR 129
Query: 415 ENLHGNKKDGNAFGW------------TERYKVAVGVAEALDYLHNSCEQPVIHKDVKSS 462
E L + G + + + +A ++YL Q IH+D+ +
Sbjct: 130 EYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYL---ASQKCIHRDLAAR 186
Query: 463 NILLSDDFEPQLSDFGLASWLSTSSSHLTCTDVAGTFGYLAPEYFMHGKVSEKIDVYAFG 522
N+L++++ +++DFGLA ++ + T+ ++APE + + DV++FG
Sbjct: 187 NVLVTENNVMKIADFGLARDINNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFG 246
Query: 523 IVLLELLS 530
+++ E+ +
Sbjct: 247 VLMWEIFT 254
>pdb|3IOP|A Chain A, Pdk-1 In Complex With The Inhibitor Compound-8i
pdb|3QCQ|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-(3-
Amino-1h-Indazol-6-Yl)-N4-Ethyl-2,4-Pyrimidinediamine
pdb|3QCS|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-[2-
Amino-6-(4-Morpholinyl)-4-Pyrimidinyl]-1h-Indazol-3-
Amine
pdb|3QCX|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-{2-
Amino-6-[(3r)-3-Methyl-4-Morpholinyl]-4-Pyrimidinyl}-1h-
Indazol-3- Amine
pdb|3QCY|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 4-[2-
Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-Pyrimidinyl]-N-
Phenyl-2- Morpholinecarboxamide
pdb|3QD0|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With (2r,5s)-
1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-Pyrimidinyl]-6-
Methyl-N- Phenyl-3-Piperidinecarboxamide
pdb|3QD3|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 1,1- Dimethylethyl
{(3r,6s)-1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-
Pyrimidinyl]-6-Methyl-3-Piperidinyl}carbamate
pdb|3QD4|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 1,1-
Dimethylethyl{(3r,
5r)-1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-
Pyrimidinyl]-5-Methyl-3-Piperidinyl}carbamate
Length = 312
Score = 79.7 bits (195), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 63/208 (30%), Positives = 103/208 (49%), Gaps = 14/208 (6%)
Query: 338 LVGKGGHSHVYRGC-LPDGKELAVKILKPSEDVLKE-----FASEIEIITALHHRNIISL 391
++G+G S V L +E A+KIL+ ++KE E ++++ L H + L
Sbjct: 40 ILGEGSFSTVVLARELATSREYAIKILE-KRHIIKENKVPYVTRERDVMSRLDHPFFVKL 98
Query: 392 FGFCFEDNNLLLVYDFLSRGSLEENLHGNKKDGNAFGWTERYKVAVGVAEALDYLHNSCE 451
+ F F+D+ L Y LS E L +K G+ R+ A + AL+YLH
Sbjct: 99 Y-FTFQDDEKL--YFGLSYAKNGELLKYIRKIGSFDETCTRFYTA-EIVSALEYLHG--- 151
Query: 452 QPVIHKDVKSSNILLSDDFEPQLSDFGLASWLSTSSSHLTCTDVAGTFGYLAPEYFMHGK 511
+ +IH+D+K NILL++D Q++DFG A LS S GT Y++PE
Sbjct: 152 KGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKS 211
Query: 512 VSEKIDVYAFGIVLLELLSGKKPINSEN 539
+ D++A G ++ +L++G P + N
Sbjct: 212 ACKSSDLWALGCIIYQLVAGLPPFRAGN 239
>pdb|2BIY|A Chain A, Structure Of Pdk1-S241a Mutant Kinase Domain
Length = 310
Score = 79.7 bits (195), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 63/208 (30%), Positives = 103/208 (49%), Gaps = 14/208 (6%)
Query: 338 LVGKGGHSHVYRGC-LPDGKELAVKILKPSEDVLKE-----FASEIEIITALHHRNIISL 391
++G+G S V L +E A+KIL+ ++KE E ++++ L H + L
Sbjct: 37 ILGEGSFSTVVLARELATSREYAIKILE-KRHIIKENKVPYVTRERDVMSRLDHPFFVKL 95
Query: 392 FGFCFEDNNLLLVYDFLSRGSLEENLHGNKKDGNAFGWTERYKVAVGVAEALDYLHNSCE 451
+ F F+D+ L Y LS E L +K G+ R+ A + AL+YLH
Sbjct: 96 Y-FTFQDDEKL--YFGLSYAKNGELLKYIRKIGSFDETCTRFYTA-EIVSALEYLHG--- 148
Query: 452 QPVIHKDVKSSNILLSDDFEPQLSDFGLASWLSTSSSHLTCTDVAGTFGYLAPEYFMHGK 511
+ +IH+D+K NILL++D Q++DFG A LS S GT Y++PE
Sbjct: 149 KGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANAFVGTAQYVSPELLTEKS 208
Query: 512 VSEKIDVYAFGIVLLELLSGKKPINSEN 539
+ D++A G ++ +L++G P + N
Sbjct: 209 ACKSSDLWALGCIIYQLVAGLPPFRAGN 236
>pdb|3KU2|A Chain A, Crystal Structure Of Inactivated Form Of Cdpk1 From
Toxoplasma Gondii, Tgme49.101440
Length = 507
Score = 79.7 bits (195), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 60/193 (31%), Positives = 96/193 (49%), Gaps = 20/193 (10%)
Query: 355 GKELAVKILKPSEDVLK----EFASEIEIITALHHRNIISLFGFCFEDNNLL-LVYDFLS 409
G+E AVK++ + K E++++ L H NI+ L+ F FED LV + +
Sbjct: 74 GQECAVKVISKRQVKQKTDKESLLREVQLLKQLDHPNIMKLYEF-FEDKGYFYLVGEVYT 132
Query: 410 RGSLEENLHGNKKDGNAFGWTERYKVAVGVAEALDYLHNSCEQPVIHKDVKSSNILL--- 466
G L + + K+ F + ++ V + Y+H + ++H+D+K N+LL
Sbjct: 133 GGELFDEIISRKR----FSEVDAARIIRQVLSGITYMHKN---KIVHRDLKPENLLLESK 185
Query: 467 SDDFEPQLSDFGLASWLSTSSSHLTCTDVAGTFGYLAPEYFMHGKVSEKIDVYAFGIVLL 526
S D ++ DFGL++ S D GT Y+APE +HG EK DV++ G++L
Sbjct: 186 SKDANIRIIDFGLSTHFEASKK---MKDKIGTAYYIAPE-VLHGTYDEKCDVWSTGVILY 241
Query: 527 ELLSGKKPINSEN 539
LLSG P N N
Sbjct: 242 ILLSGCPPFNGAN 254
>pdb|1UU3|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Ly333531
pdb|1UU7|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-2
pdb|1UU8|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-1
pdb|1OKY|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Staurosporine
pdb|1OKZ|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Ucn-01
Length = 310
Score = 79.7 bits (195), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 63/208 (30%), Positives = 103/208 (49%), Gaps = 14/208 (6%)
Query: 338 LVGKGGHSHVYRGC-LPDGKELAVKILKPSEDVLKE-----FASEIEIITALHHRNIISL 391
++G+G S V L +E A+KIL+ ++KE E ++++ L H + L
Sbjct: 37 ILGEGSFSTVVLARELATSREYAIKILE-KRHIIKENKVPYVTRERDVMSRLDHPFFVKL 95
Query: 392 FGFCFEDNNLLLVYDFLSRGSLEENLHGNKKDGNAFGWTERYKVAVGVAEALDYLHNSCE 451
+ F F+D+ L Y LS E L +K G+ R+ A + AL+YLH
Sbjct: 96 Y-FTFQDDEKL--YFGLSYAKNGELLKYIRKIGSFDETCTRFYTA-EIVSALEYLHG--- 148
Query: 452 QPVIHKDVKSSNILLSDDFEPQLSDFGLASWLSTSSSHLTCTDVAGTFGYLAPEYFMHGK 511
+ +IH+D+K NILL++D Q++DFG A LS S GT Y++PE
Sbjct: 149 KGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKS 208
Query: 512 VSEKIDVYAFGIVLLELLSGKKPINSEN 539
+ D++A G ++ +L++G P + N
Sbjct: 209 ACKSSDLWALGCIIYQLVAGLPPFRAGN 236
>pdb|4A07|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Activator Ps171 Bound To The Pif-Pocket
pdb|4AW0|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Compound Ps182 Bound To The Pif-Pocket
Length = 311
Score = 79.7 bits (195), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 63/208 (30%), Positives = 103/208 (49%), Gaps = 14/208 (6%)
Query: 338 LVGKGGHSHVYRGC-LPDGKELAVKILKPSEDVLKE-----FASEIEIITALHHRNIISL 391
++G+G S V L +E A+KIL+ ++KE E ++++ L H + L
Sbjct: 39 ILGEGSFSTVVLARELATSREYAIKILE-KRHIIKENKVPYVTRERDVMSRLDHPFFVKL 97
Query: 392 FGFCFEDNNLLLVYDFLSRGSLEENLHGNKKDGNAFGWTERYKVAVGVAEALDYLHNSCE 451
+ F F+D+ L Y LS E L +K G+ R+ A + AL+YLH
Sbjct: 98 Y-FTFQDDEKL--YFGLSYAKNGELLKYIRKIGSFDETCTRFYTA-EIVSALEYLHG--- 150
Query: 452 QPVIHKDVKSSNILLSDDFEPQLSDFGLASWLSTSSSHLTCTDVAGTFGYLAPEYFMHGK 511
+ +IH+D+K NILL++D Q++DFG A LS S GT Y++PE
Sbjct: 151 KGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKS 210
Query: 512 VSEKIDVYAFGIVLLELLSGKKPINSEN 539
+ D++A G ++ +L++G P + N
Sbjct: 211 AXKSSDLWALGCIIYQLVAGLPPFRAGN 238
>pdb|2W1C|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1G|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 275
Score = 79.7 bits (195), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 59/204 (28%), Positives = 96/204 (47%), Gaps = 16/204 (7%)
Query: 339 VGKGGHSHVYRGCLPDGKE-LAVKILKPSE----DVLKEFASEIEIITALHHRNIISLFG 393
+GKG +VY K LA+K+L ++ V + E+EI + L H NI+ L+G
Sbjct: 19 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 78
Query: 394 FCFEDNNLLLVYDFLSRGSLEENLHGNKKDGNAFGWTERYKVAVGVAEALDYLHNSCEQP 453
+ + + L+ ++ G++ L K F +A AL Y H+ +
Sbjct: 79 YFHDATRVYLILEYAPLGTVYRELQKLSK----FDEQRTATYITELANALSYCHS---KR 131
Query: 454 VIHKDVKSSNILLSDDFEPQLSDFGLASWLSTSSSHLTCTDVAGTFGYLAPEYFMHGKVS 513
VIH+D+K N+LL E +++DFG + +S C GT YL PE
Sbjct: 132 VIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRXXLC----GTLDYLPPEMIEGRMHD 187
Query: 514 EKIDVYAFGIVLLELLSGKKPINS 537
EK+D+++ G++ E L GK P +
Sbjct: 188 EKVDLWSLGVLCYEFLVGKPPFEA 211
>pdb|2XCH|A Chain A, Crystal Structure Of Pdk1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 309
Score = 79.7 bits (195), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 63/208 (30%), Positives = 103/208 (49%), Gaps = 14/208 (6%)
Query: 338 LVGKGGHSHVYRGC-LPDGKELAVKILKPSEDVLKE-----FASEIEIITALHHRNIISL 391
++G+G S V L +E A+KIL+ ++KE E ++++ L H + L
Sbjct: 37 ILGEGSFSTVVLARELATSREYAIKILE-KRHIIKENKVPYVTRERDVMSRLDHPFFVKL 95
Query: 392 FGFCFEDNNLLLVYDFLSRGSLEENLHGNKKDGNAFGWTERYKVAVGVAEALDYLHNSCE 451
+ F F+D+ L Y LS E L +K G+ R+ A + AL+YLH
Sbjct: 96 Y-FTFQDDEKL--YFGLSYAKNGELLKYIRKIGSFDETCTRFYTA-EIVSALEYLHG--- 148
Query: 452 QPVIHKDVKSSNILLSDDFEPQLSDFGLASWLSTSSSHLTCTDVAGTFGYLAPEYFMHGK 511
+ +IH+D+K NILL++D Q++DFG A LS S GT Y++PE
Sbjct: 149 KGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKS 208
Query: 512 VSEKIDVYAFGIVLLELLSGKKPINSEN 539
+ D++A G ++ +L++G P + N
Sbjct: 209 ACKSSDLWALGCIIYQLVAGLPPFRAGN 236
>pdb|3QC4|A Chain A, Pdk1 In Complex With Dfg-Out Inhibitor Xxx
pdb|3QC4|B Chain B, Pdk1 In Complex With Dfg-Out Inhibitor Xxx
Length = 314
Score = 79.7 bits (195), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 63/208 (30%), Positives = 103/208 (49%), Gaps = 14/208 (6%)
Query: 338 LVGKGGHSHVYRGC-LPDGKELAVKILKPSEDVLKE-----FASEIEIITALHHRNIISL 391
++G+G S V L +E A+KIL+ ++KE E ++++ L H + L
Sbjct: 42 ILGEGSFSTVVLARELATSREYAIKILE-KRHIIKENKVPYVTRERDVMSRLDHPFFVKL 100
Query: 392 FGFCFEDNNLLLVYDFLSRGSLEENLHGNKKDGNAFGWTERYKVAVGVAEALDYLHNSCE 451
+ F F+D+ L Y LS E L +K G+ R+ A + AL+YLH
Sbjct: 101 Y-FTFQDDEKL--YFGLSYAKNGELLKYIRKIGSFDETCTRFYTA-EIVSALEYLHG--- 153
Query: 452 QPVIHKDVKSSNILLSDDFEPQLSDFGLASWLSTSSSHLTCTDVAGTFGYLAPEYFMHGK 511
+ +IH+D+K NILL++D Q++DFG A LS S GT Y++PE
Sbjct: 154 KGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKS 213
Query: 512 VSEKIDVYAFGIVLLELLSGKKPINSEN 539
+ D++A G ++ +L++G P + N
Sbjct: 214 ACKSSDLWALGCIIYQLVAGLPPFRAGN 241
>pdb|3B2T|A Chain A, Structure Of Phosphotransferase
pdb|3B2T|B Chain B, Structure Of Phosphotransferase
Length = 311
Score = 79.7 bits (195), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 48/188 (25%), Positives = 98/188 (52%), Gaps = 18/188 (9%)
Query: 358 LAVKILK--PSEDVLKEFASEIEIITAL-HHRNIISLFGFCFEDNNLLLVYDFLSRGSLE 414
+AVK+LK +E L + SE+E++ + H+NII+L G C +D L ++ ++ S+G+L
Sbjct: 57 VAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLR 116
Query: 415 ENLHGNKKDGNAFGW------------TERYKVAVGVAEALDYLHNSCEQPVIHKDVKSS 462
E L + G + + + +A ++YL Q IH+D+ +
Sbjct: 117 EYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYL---ASQKCIHRDLTAR 173
Query: 463 NILLSDDFEPQLSDFGLASWLSTSSSHLTCTDVAGTFGYLAPEYFMHGKVSEKIDVYAFG 522
N+L++++ +++DFGLA ++ + T+ ++APE + + DV++FG
Sbjct: 174 NVLVTENNVMKIADFGLARDINNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFG 233
Query: 523 IVLLELLS 530
+++ E+ +
Sbjct: 234 VLMWEIFT 241
>pdb|3HX4|A Chain A, Crystal Structure Of Cdpk1 Of Toxoplasma Gondii,
Tgme49_101440, In Presence Of Calcium
Length = 508
Score = 79.7 bits (195), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 60/193 (31%), Positives = 96/193 (49%), Gaps = 20/193 (10%)
Query: 355 GKELAVKILKPSEDVLK----EFASEIEIITALHHRNIISLFGFCFEDNNLL-LVYDFLS 409
G+E AVK++ + K E++++ L H NI+ L+ F FED LV + +
Sbjct: 75 GQECAVKVISKRQVKQKTDKESLLREVQLLKQLDHPNIMKLYEF-FEDKGYFYLVGEVYT 133
Query: 410 RGSLEENLHGNKKDGNAFGWTERYKVAVGVAEALDYLHNSCEQPVIHKDVKSSNILL--- 466
G L + + K+ F + ++ V + Y+H + ++H+D+K N+LL
Sbjct: 134 GGELFDEIISRKR----FSEVDAARIIRQVLSGITYMHKN---KIVHRDLKPENLLLESK 186
Query: 467 SDDFEPQLSDFGLASWLSTSSSHLTCTDVAGTFGYLAPEYFMHGKVSEKIDVYAFGIVLL 526
S D ++ DFGL++ S D GT Y+APE +HG EK DV++ G++L
Sbjct: 187 SKDANIRIIDFGLSTHFEASKK---MKDKIGTAYYIAPE-VLHGTYDEKCDVWSTGVILY 242
Query: 527 ELLSGKKPINSEN 539
LLSG P N N
Sbjct: 243 ILLSGCPPFNGAN 255
>pdb|2PVY|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|C Chain C, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|D Chain D, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome
Length = 324
Score = 79.7 bits (195), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 48/188 (25%), Positives = 98/188 (52%), Gaps = 18/188 (9%)
Query: 358 LAVKILK--PSEDVLKEFASEIEIITAL-HHRNIISLFGFCFEDNNLLLVYDFLSRGSLE 414
+AVK+LK +E L + SE+E++ + H+NII+L G C +D L ++ ++ S+G+L
Sbjct: 70 VAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLR 129
Query: 415 ENLHGNKKDGNAFGW------------TERYKVAVGVAEALDYLHNSCEQPVIHKDVKSS 462
E L + G + + + +A ++YL Q IH+D+ +
Sbjct: 130 EYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYL---ASQKCIHRDLAAR 186
Query: 463 NILLSDDFEPQLSDFGLASWLSTSSSHLTCTDVAGTFGYLAPEYFMHGKVSEKIDVYAFG 522
N+L++++ +++DFGLA ++ + T+ ++APE + + DV++FG
Sbjct: 187 NVLVTENNVMKIADFGLARDINNIDYYKNTTNGRLPVKWMAPEALFDRVYTHQSDVWSFG 246
Query: 523 IVLLELLS 530
+++ E+ +
Sbjct: 247 VLMWEIFT 254
>pdb|3HA6|A Chain A, Crystal Structure Of Aurora A In Complex With Tpx2 And
Compound 10
Length = 268
Score = 79.7 bits (195), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 59/204 (28%), Positives = 96/204 (47%), Gaps = 16/204 (7%)
Query: 339 VGKGGHSHVYRGCLPDGKE-LAVKILKPSE----DVLKEFASEIEIITALHHRNIISLFG 393
+GKG +VY K LA+K+L ++ V + E+EI + L H NI+ L+G
Sbjct: 16 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 75
Query: 394 FCFEDNNLLLVYDFLSRGSLEENLHGNKKDGNAFGWTERYKVAVGVAEALDYLHNSCEQP 453
+ + + L+ ++ G++ L K F +A AL Y H+ +
Sbjct: 76 YFHDATRVYLILEYAPLGTVYRELQKLSK----FDEQRTATYITELANALSYCHS---KR 128
Query: 454 VIHKDVKSSNILLSDDFEPQLSDFGLASWLSTSSSHLTCTDVAGTFGYLAPEYFMHGKVS 513
VIH+D+K N+LL E +++DFG + +S C GT YL PE
Sbjct: 129 VIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRXXLC----GTLDYLPPEMIEGRMHD 184
Query: 514 EKIDVYAFGIVLLELLSGKKPINS 537
EK+D+++ G++ E L GK P +
Sbjct: 185 EKVDLWSLGVLCYEFLVGKPPFEA 208
>pdb|3HRC|A Chain A, Crystal Structure Of A Mutant Of Human Pdk1 Kinase Domain
In Complex With Atp
pdb|3HRF|A Chain A, Crystal Structure Of Human Pdk1 Kinase Domain In Complex
With An Allosteric Activator Bound To The Pif-Pocket
pdb|3RCJ|A Chain A, Rapid Preparation Of Triazolyl Substituted Nh-Heterocyclic
Kinase Inhibitors Via One-Pot Sonogashira Coupling
Tms-Deprotection Cuaac Sequence
pdb|4A06|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Activator Ps114 Bound To The Pif-Pocket
pdb|4AW1|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Compound Ps210 Bound To The Pif-Pocket
Length = 311
Score = 79.7 bits (195), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 63/208 (30%), Positives = 103/208 (49%), Gaps = 14/208 (6%)
Query: 338 LVGKGGHSHVYRGC-LPDGKELAVKILKPSEDVLKE-----FASEIEIITALHHRNIISL 391
++G+G S V L +E A+KIL+ ++KE E ++++ L H + L
Sbjct: 39 ILGEGSFSTVVLARELATSREYAIKILE-KRHIIKENKVPYVTRERDVMSRLDHPFFVKL 97
Query: 392 FGFCFEDNNLLLVYDFLSRGSLEENLHGNKKDGNAFGWTERYKVAVGVAEALDYLHNSCE 451
+ F F+D+ L Y LS E L +K G+ R+ A + AL+YLH
Sbjct: 98 Y-FTFQDDEKL--YFGLSYAKNGELLKYIRKIGSFDETCTRFYTA-EIVSALEYLHG--- 150
Query: 452 QPVIHKDVKSSNILLSDDFEPQLSDFGLASWLSTSSSHLTCTDVAGTFGYLAPEYFMHGK 511
+ +IH+D+K NILL++D Q++DFG A LS S GT Y++PE
Sbjct: 151 KGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKS 210
Query: 512 VSEKIDVYAFGIVLLELLSGKKPINSEN 539
+ D++A G ++ +L++G P + N
Sbjct: 211 ACKSSDLWALGCIIYQLVAGLPPFRAGN 238
>pdb|2BVA|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4
pdb|2BVA|B Chain B, Crystal Structure Of The Human P21-Activated Kinase 4
Length = 292
Score = 79.7 bits (195), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 66/234 (28%), Positives = 113/234 (48%), Gaps = 13/234 (5%)
Query: 355 GKELAVKILKPSEDVLKEFA-SEIEIITALHHRNIISLFGFCFEDNNLLLVYDFLSRGSL 413
GK +AVK + + +E +E+ I+ H N++ ++ + L +V +FL G+L
Sbjct: 45 GKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYLVGDELWVVMEFLEGGAL 104
Query: 414 EENLHGNKKDGNAFGWTERYKVAVGVAEALDYLHNSCEQPVIHKDVKSSNILLSDDFEPQ 473
+ + + + V + V +AL LH Q VIH+D+KS +ILL+ D +
Sbjct: 105 TDIVTHTRMNEEQIA-----AVCLAVLQALSVLH---AQGVIHRDIKSDSILLTHDGRVK 156
Query: 474 LSDFGLASWLSTSSSHLTCTDVAGTFGYLAPEYFMHGKVSEKIDVYAFGIVLLELLSGKK 533
LSDFG + +S + GT ++APE ++D+++ GI+++E++ G+
Sbjct: 157 LSDFGFCAQVSKEVPRRKX--LVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEP 214
Query: 534 PINSENP-KGQESLVMWAKPILKD-GKVSQLLDPSLDTDYDNDQIERMVLAATL 585
P +E P K + + P LK+ KVS L LD D +R A L
Sbjct: 215 PYFNEPPLKAMKMIRDNLPPRLKNLHKVSPSLKGFLDRLLVRDPAQRATAAELL 268
>pdb|3H9O|A Chain A, Phosphoinositide-Dependent Protein Kinase 1 (Pdk-1) In
Complex With Compound 9
Length = 311
Score = 79.7 bits (195), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 63/208 (30%), Positives = 103/208 (49%), Gaps = 14/208 (6%)
Query: 338 LVGKGGHSHVYRGC-LPDGKELAVKILKPSEDVLKE-----FASEIEIITALHHRNIISL 391
++G+G S V L +E A+KIL+ ++KE E ++++ L H + L
Sbjct: 39 ILGEGSFSTVVLARELATSREYAIKILE-KRHIIKENKVPYVTRERDVMSRLDHPFFVKL 97
Query: 392 FGFCFEDNNLLLVYDFLSRGSLEENLHGNKKDGNAFGWTERYKVAVGVAEALDYLHNSCE 451
+ F F+D+ L Y LS E L +K G+ R+ A + AL+YLH
Sbjct: 98 Y-FTFQDDEKL--YFGLSYAKNGELLKYIRKIGSFDETCTRFYTA-EIVSALEYLHG--- 150
Query: 452 QPVIHKDVKSSNILLSDDFEPQLSDFGLASWLSTSSSHLTCTDVAGTFGYLAPEYFMHGK 511
+ +IH+D+K NILL++D Q++DFG A LS S GT Y++PE
Sbjct: 151 KGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKS 210
Query: 512 VSEKIDVYAFGIVLLELLSGKKPINSEN 539
+ D++A G ++ +L++G P + N
Sbjct: 211 ACKSSDLWALGCIIYQLVAGLPPFRAGN 238
>pdb|3SC1|A Chain A, Novel Isoquinolone Pdk1 Inhibitors Discovered Through
Fragment-Based Lead Discovery
pdb|3RWQ|A Chain A, Discovery Of A Novel, Potent And Selective Inhibitor Of 3-
Phosphoinositide Dependent Kinase (Pdk1)
Length = 311
Score = 79.7 bits (195), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 63/208 (30%), Positives = 103/208 (49%), Gaps = 14/208 (6%)
Query: 338 LVGKGGHSHVYRGC-LPDGKELAVKILKPSEDVLKE-----FASEIEIITALHHRNIISL 391
++G+G S V L +E A+KIL+ ++KE E ++++ L H + L
Sbjct: 39 ILGEGSFSTVVLARELATSREYAIKILE-KRHIIKENKVPYVTRERDVMSRLDHPFFVKL 97
Query: 392 FGFCFEDNNLLLVYDFLSRGSLEENLHGNKKDGNAFGWTERYKVAVGVAEALDYLHNSCE 451
+ F F+D+ L Y LS E L +K G+ R+ A + AL+YLH
Sbjct: 98 Y-FTFQDDEKL--YFGLSYAKNGELLKYIRKIGSFDETCTRFYTA-EIVSALEYLHG--- 150
Query: 452 QPVIHKDVKSSNILLSDDFEPQLSDFGLASWLSTSSSHLTCTDVAGTFGYLAPEYFMHGK 511
+ +IH+D+K NILL++D Q++DFG A LS S GT Y++PE
Sbjct: 151 KGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKS 210
Query: 512 VSEKIDVYAFGIVLLELLSGKKPINSEN 539
+ D++A G ++ +L++G P + N
Sbjct: 211 ACKSSDLWALGCIIYQLVAGLPPFRAGN 238
>pdb|3O50|A Chain A, Crystal Structure Of Benzamide 9 Bound To Auroraa
pdb|3O50|B Chain B, Crystal Structure Of Benzamide 9 Bound To Auroraa
pdb|3O51|A Chain A, Crystal Structure Of Anthranilamide 10 Bound To Auroraa
pdb|3EFW|A Chain A, Structure Of Auroraa With Pyridyl-Pyrimidine Urea
Inhibitor
pdb|3EFW|B Chain B, Structure Of Auroraa With Pyridyl-Pyrimidine Urea
Inhibitor
Length = 267
Score = 79.7 bits (195), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 59/204 (28%), Positives = 97/204 (47%), Gaps = 16/204 (7%)
Query: 339 VGKGGHSHVYRGCLPDGKE-LAVKILKPSE----DVLKEFASEIEIITALHHRNIISLFG 393
+GKG +VY K LA+K+L ++ V + E+EI + L H NI+ L+G
Sbjct: 15 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 74
Query: 394 FCFEDNNLLLVYDFLSRGSLEENLHGNKKDGNAFGWTERYKVAVGVAEALDYLHNSCEQP 453
+ + + L+ ++ G++ L K F +A AL Y H+ +
Sbjct: 75 YFHDATRVYLILEYAPLGTVYRELQKLSK----FDEQRTATYITELANALSYCHS---KR 127
Query: 454 VIHKDVKSSNILLSDDFEPQLSDFGLASWLSTSSSHLTCTDVAGTFGYLAPEYFMHGKVS 513
VIH+D+K N+LL E +++DFG + +S T + GT YL PE
Sbjct: 128 VIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRR----TTLCGTLDYLPPEMIEGRMHD 183
Query: 514 EKIDVYAFGIVLLELLSGKKPINS 537
EK+D+++ G++ E L GK P +
Sbjct: 184 EKVDLWSLGVLCYEFLVGKPPFEA 207
>pdb|3I79|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1)
pdb|3I7B|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor Nm-Pp1
pdb|3N51|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor
Rm-1-95
pdb|3SX9|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-132
pdb|3SXF|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-89
pdb|3T3U|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-130
pdb|3T3V|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-87
pdb|3UPX|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1300
pdb|3UPZ|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumpless Bki Analog Uw1243
pdb|3V51|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Rm-1-176
pdb|3V5P|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1288
pdb|3V5T|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1299
Length = 484
Score = 79.7 bits (195), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 60/193 (31%), Positives = 96/193 (49%), Gaps = 20/193 (10%)
Query: 355 GKELAVKILKPSEDVLK----EFASEIEIITALHHRNIISLFGFCFEDNNLL-LVYDFLS 409
G+E AVK++ + K E++++ L H NI+ L+ F FED LV + +
Sbjct: 51 GQECAVKVISKRQVKQKTDKESLLREVQLLKQLDHPNIMKLYEF-FEDKGYFYLVGEVYT 109
Query: 410 RGSLEENLHGNKKDGNAFGWTERYKVAVGVAEALDYLHNSCEQPVIHKDVKSSNILL--- 466
G L + + K+ F + ++ V + Y+H + ++H+D+K N+LL
Sbjct: 110 GGELFDEIISRKR----FSEVDAARIIRQVLSGITYMHKN---KIVHRDLKPENLLLESK 162
Query: 467 SDDFEPQLSDFGLASWLSTSSSHLTCTDVAGTFGYLAPEYFMHGKVSEKIDVYAFGIVLL 526
S D ++ DFGL++ S D GT Y+APE +HG EK DV++ G++L
Sbjct: 163 SKDANIRIIDFGLSTHFEASKK---MKDKIGTAYYIAPE-VLHGTYDEKCDVWSTGVILY 218
Query: 527 ELLSGKKPINSEN 539
LLSG P N N
Sbjct: 219 ILLSGCPPFNGAN 231
>pdb|3H0Y|A Chain A, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|A Chain A, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|B Chain B, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|C Chain C, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H10|A Chain A, Aurora A Inhibitor Complex
pdb|3H10|B Chain B, Aurora A Inhibitor Complex
pdb|3H10|D Chain D, Aurora A Inhibitor Complex
pdb|3P9J|A Chain A, Aurora A Kinase Domain With Phthalazinone Pyrazole
Inhibitor
Length = 268
Score = 79.7 bits (195), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 59/204 (28%), Positives = 96/204 (47%), Gaps = 16/204 (7%)
Query: 339 VGKGGHSHVYRGCLPDGKE-LAVKILKPSE----DVLKEFASEIEIITALHHRNIISLFG 393
+GKG +VY K LA+K+L ++ V + E+EI + L H NI+ L+G
Sbjct: 16 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 75
Query: 394 FCFEDNNLLLVYDFLSRGSLEENLHGNKKDGNAFGWTERYKVAVGVAEALDYLHNSCEQP 453
+ + + L+ ++ G++ L K F +A AL Y H+ +
Sbjct: 76 YFHDATRVYLILEYAPLGTVYRELQKLSK----FDEQRTATYITELANALSYCHS---KR 128
Query: 454 VIHKDVKSSNILLSDDFEPQLSDFGLASWLSTSSSHLTCTDVAGTFGYLAPEYFMHGKVS 513
VIH+D+K N+LL E +++DFG + +S C GT YL PE
Sbjct: 129 VIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRAALC----GTLDYLPPEMIEGRMHD 184
Query: 514 EKIDVYAFGIVLLELLSGKKPINS 537
EK+D+++ G++ E L GK P +
Sbjct: 185 EKVDLWSLGVLCYEFLVGKPPFEA 208
>pdb|2V7A|A Chain A, Crystal Structure Of The T315i Abl Mutant In Complex With
The Inhibitor Pha-739358
pdb|2V7A|B Chain B, Crystal Structure Of The T315i Abl Mutant In Complex With
The Inhibitor Pha-739358
Length = 286
Score = 79.7 bits (195), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 53/192 (27%), Positives = 98/192 (51%), Gaps = 9/192 (4%)
Query: 339 VGKGGHSHVYRGCLPD-GKELAVKILKPSEDVLKEFASEIEIITALHHRNIISLFGFCFE 397
+G G + VY G +AVK LK ++EF E ++ + H N++ L G C
Sbjct: 22 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTR 81
Query: 398 DNNLLLVYDFLSRGSLEENLH-GNKKDGNAFGWTERYKVAVGVAEALDYLHNSCEQPVIH 456
+ ++ +F++ G+L + L N+++ NA +A ++ A++YL ++ IH
Sbjct: 82 EPPFYIIIEFMTYGNLLDYLRECNRQEVNA---VVLLYMATQISSAMEYLE---KKNFIH 135
Query: 457 KDVKSSNILLSDDFEPQLSDFGLASWLSTSSSHLTCTDVAGTFGYLAPEYFMHGKVSEKI 516
+D+ + N L+ ++ +++DFGL+ L T + + APE + K S K
Sbjct: 136 RDLAARNCLVGENHLVKVADFGLSR-LMTGDTXTAHAGAKFPIKWTAPESLAYNKFSIKS 194
Query: 517 DVYAFGIVLLEL 528
DV+AFG++L E+
Sbjct: 195 DVWAFGVLLWEI 206
>pdb|2W1D|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1E|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1F|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 275
Score = 79.7 bits (195), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 59/204 (28%), Positives = 97/204 (47%), Gaps = 16/204 (7%)
Query: 339 VGKGGHSHVYRGCLPDGKE-LAVKILKPSE----DVLKEFASEIEIITALHHRNIISLFG 393
+GKG +VY K LA+K+L ++ V + E+EI + L H NI+ L+G
Sbjct: 19 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 78
Query: 394 FCFEDNNLLLVYDFLSRGSLEENLHGNKKDGNAFGWTERYKVAVGVAEALDYLHNSCEQP 453
+ + + L+ ++ G++ L K F +A AL Y H+ +
Sbjct: 79 YFHDATRVYLILEYAPLGTVYRELQKLSK----FDEQRTATYITELANALSYCHS---KR 131
Query: 454 VIHKDVKSSNILLSDDFEPQLSDFGLASWLSTSSSHLTCTDVAGTFGYLAPEYFMHGKVS 513
VIH+D+K N+LL E +++DFG + +S T + GT YL PE
Sbjct: 132 VIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRR----TTLCGTLDYLPPEMIEGRMHD 187
Query: 514 EKIDVYAFGIVLLELLSGKKPINS 537
EK+D+++ G++ E L GK P +
Sbjct: 188 EKVDLWSLGVLCYEFLVGKPPFEA 211
>pdb|3RI1|A Chain A, Crystal Structure Of The Catalytic Domain Of Fgfr2 Kinase
In Complex With Arq 069
pdb|3RI1|B Chain B, Crystal Structure Of The Catalytic Domain Of Fgfr2 Kinase
In Complex With Arq 069
Length = 313
Score = 79.7 bits (195), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 48/188 (25%), Positives = 98/188 (52%), Gaps = 18/188 (9%)
Query: 358 LAVKILK--PSEDVLKEFASEIEIITAL-HHRNIISLFGFCFEDNNLLLVYDFLSRGSLE 414
+AVK+LK +E L + SE+E++ + H+NII+L G C +D L ++ ++ S+G+L
Sbjct: 59 VAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLR 118
Query: 415 ENLHGNKKDGNAFGW------------TERYKVAVGVAEALDYLHNSCEQPVIHKDVKSS 462
E L + G + + + +A ++YL Q IH+D+ +
Sbjct: 119 EYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYL---ASQKCIHRDLAAR 175
Query: 463 NILLSDDFEPQLSDFGLASWLSTSSSHLTCTDVAGTFGYLAPEYFMHGKVSEKIDVYAFG 522
N+L++++ +++DFGLA ++ + T+ ++APE + + DV++FG
Sbjct: 176 NVLVTENNVMKIADFGLARDINNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFG 235
Query: 523 IVLLELLS 530
+++ E+ +
Sbjct: 236 VLMWEIFT 243
>pdb|2PZR|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K641r Mutation Responsible For
Pfeiffer Syndrome
pdb|2PZR|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K641r Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 79.7 bits (195), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 48/188 (25%), Positives = 98/188 (52%), Gaps = 18/188 (9%)
Query: 358 LAVKILK--PSEDVLKEFASEIEIITAL-HHRNIISLFGFCFEDNNLLLVYDFLSRGSLE 414
+AVK+LK +E L + SE+E++ + H+NII+L G C +D L ++ ++ S+G+L
Sbjct: 70 VAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLR 129
Query: 415 ENLHGNKKDGNAFGW------------TERYKVAVGVAEALDYLHNSCEQPVIHKDVKSS 462
E L + G + + + +A ++YL Q IH+D+ +
Sbjct: 130 EYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYL---ASQKCIHRDLAAR 186
Query: 463 NILLSDDFEPQLSDFGLASWLSTSSSHLTCTDVAGTFGYLAPEYFMHGKVSEKIDVYAFG 522
N+L++++ +++DFGLA ++ + T+ ++APE + + DV++FG
Sbjct: 187 NVLVTENNVMRIADFGLARDINNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFG 246
Query: 523 IVLLELLS 530
+++ E+ +
Sbjct: 247 VLMWEIFT 254
>pdb|2GQG|A Chain A, X-Ray Crystal Structure Of Dasatinib (Bms-354825) Bound To
Activated Abl Kinase Domain
pdb|2GQG|B Chain B, X-Ray Crystal Structure Of Dasatinib (Bms-354825) Bound To
Activated Abl Kinase Domain
Length = 278
Score = 79.7 bits (195), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 55/199 (27%), Positives = 101/199 (50%), Gaps = 10/199 (5%)
Query: 339 VGKGGHSHVYRGCLPD-GKELAVKILKPSEDVLKEFASEIEIITALHHRNIISLFGFCFE 397
+G G + VY G +AVK LK ++EF E ++ + H N++ L G C
Sbjct: 26 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTR 85
Query: 398 DNNLLLVYDFLSRGSLEENLH-GNKKDGNAFGWTERYKVAVGVAEALDYLHNSCEQPVIH 456
+ ++ +F++ G+L + L N+++ NA +A ++ A++YL ++ IH
Sbjct: 86 EPPFYIITEFMTYGNLLDYLRECNRQEVNA---VVLLYMATQISSAMEYLE---KKNFIH 139
Query: 457 KDVKSSNILLSDDFEPQLSDFGLASWLSTSSSHLTCTDVAGTFGYLAPEYFMHGKVSEKI 516
+D+ + N L+ ++ +++DFGL+ L T + + APE + K S K
Sbjct: 140 RDLAARNCLVGENHLVKVADFGLSR-LMTGDTXTAHAGAKFPIKWTAPESLAYNKFSIKS 198
Query: 517 DVYAFGIVLLELLS-GKKP 534
DV+AFG++L E+ + G P
Sbjct: 199 DVWAFGVLLWEIATYGMSP 217
>pdb|2X4Z|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With Pf-03758309
pdb|4APP|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With (S)-N-(5-(3-Benzyl-1-Methylpiperazine-4-
Carbonyl)-6,6-Dimethyl-1,4,5,6-Tetrahydropyrrolo(3,4-C)
Pyrazol-3-Yl)-3-Phenoxybenzamide
Length = 296
Score = 79.7 bits (195), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 66/234 (28%), Positives = 113/234 (48%), Gaps = 13/234 (5%)
Query: 355 GKELAVKILKPSEDVLKEFA-SEIEIITALHHRNIISLFGFCFEDNNLLLVYDFLSRGSL 413
GK +AVK + + +E +E+ I+ H N++ ++ + L +V +FL G+L
Sbjct: 49 GKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYLVGDELWVVMEFLEGGAL 108
Query: 414 EENLHGNKKDGNAFGWTERYKVAVGVAEALDYLHNSCEQPVIHKDVKSSNILLSDDFEPQ 473
+ + + + V + V +AL LH Q VIH+D+KS +ILL+ D +
Sbjct: 109 TDIVTHTRMNEEQIA-----AVCLAVLQALSVLH---AQGVIHRDIKSDSILLTHDGRVK 160
Query: 474 LSDFGLASWLSTSSSHLTCTDVAGTFGYLAPEYFMHGKVSEKIDVYAFGIVLLELLSGKK 533
LSDFG + +S + GT ++APE ++D+++ GI+++E++ G+
Sbjct: 161 LSDFGFCAQVSKEVPRR--KXLVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEP 218
Query: 534 PINSENP-KGQESLVMWAKPILKD-GKVSQLLDPSLDTDYDNDQIERMVLAATL 585
P +E P K + + P LK+ KVS L LD D +R A L
Sbjct: 219 PYFNEPPLKAMKMIRDNLPPRLKNLHKVSPSLKGFLDRLLVRDPAQRATAAELL 272
>pdb|1GJO|A Chain A, The Fgfr2 Tyrosine Kinase Domain
pdb|1OEC|A Chain A, Fgfr2 Kinase Domain
Length = 316
Score = 79.3 bits (194), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 48/188 (25%), Positives = 98/188 (52%), Gaps = 18/188 (9%)
Query: 358 LAVKILK--PSEDVLKEFASEIEIITAL-HHRNIISLFGFCFEDNNLLLVYDFLSRGSLE 414
+AVK+LK +E L + SE+E++ + H+NII+L G C +D L ++ ++ S+G+L
Sbjct: 62 VAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLR 121
Query: 415 ENLHGNKKDGNAFGW------------TERYKVAVGVAEALDYLHNSCEQPVIHKDVKSS 462
E L + G + + + +A ++YL Q IH+D+ +
Sbjct: 122 EYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYL---ASQKCIHRDLAAR 178
Query: 463 NILLSDDFEPQLSDFGLASWLSTSSSHLTCTDVAGTFGYLAPEYFMHGKVSEKIDVYAFG 522
N+L++++ +++DFGLA ++ + T+ ++APE + + DV++FG
Sbjct: 179 NVLVTENNVMKIADFGLARDINNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFG 238
Query: 523 IVLLELLS 530
+++ E+ +
Sbjct: 239 VLMWEIFT 246
>pdb|3E5A|A Chain A, Crystal Structure Of Aurora A In Complex With Vx-680 And
Tpx2
Length = 268
Score = 79.3 bits (194), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 59/204 (28%), Positives = 96/204 (47%), Gaps = 16/204 (7%)
Query: 339 VGKGGHSHVYRGCLPDGKE-LAVKILKPSE----DVLKEFASEIEIITALHHRNIISLFG 393
+GKG +VY K LA+K+L ++ V + E+EI + L H NI+ L+G
Sbjct: 16 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 75
Query: 394 FCFEDNNLLLVYDFLSRGSLEENLHGNKKDGNAFGWTERYKVAVGVAEALDYLHNSCEQP 453
+ + + L+ ++ G++ L K F +A AL Y H+ +
Sbjct: 76 YFHDATRVYLILEYAPLGTVYRELQKLSK----FDEQRTATYITELANALSYCHS---KR 128
Query: 454 VIHKDVKSSNILLSDDFEPQLSDFGLASWLSTSSSHLTCTDVAGTFGYLAPEYFMHGKVS 513
VIH+D+K N+LL E +++DFG + +S C GT YL PE
Sbjct: 129 VIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTXLC----GTLDYLPPEMIEGRMHD 184
Query: 514 EKIDVYAFGIVLLELLSGKKPINS 537
EK+D+++ G++ E L GK P +
Sbjct: 185 EKVDLWSLGVLCYEFLVGKPPFEA 208
>pdb|1MQB|A Chain A, Crystal Structure Of Ephrin A2 (Epha2) Receptor Protein
Kinase
pdb|1MQB|B Chain B, Crystal Structure Of Ephrin A2 (Epha2) Receptor Protein
Kinase
Length = 333
Score = 79.3 bits (194), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 65/226 (28%), Positives = 114/226 (50%), Gaps = 22/226 (9%)
Query: 324 QELLSATSNFLP-----EYLVGKGGHSHVYRGCLP--DGKE---LAVKILKP--SEDVLK 371
Q +L T+ P + ++G G VY+G L GK+ +A+K LK +E
Sbjct: 32 QAVLKFTTEIHPSCVTRQKVIGAGEFGEVYKGMLKTSSGKKEVPVAIKTLKAGYTEKQRV 91
Query: 372 EFASEIEIITALHHRNIISLFGFCFEDNNLLLVYDFLSRGSLEENLHGNKKDGNAFGWTE 431
+F E I+ H NII L G + ++++ +++ G+L++ L +KDG F +
Sbjct: 92 DFLGEAGIMGQFSHHNIIRLEGVISKYKPMMIITEYMENGALDKFLR--EKDGE-FSVLQ 148
Query: 432 RYKVAVGVAEALDYLHNSCEQPVIHKDVKSSNILLSDDFEPQLSDFGLASWLSTSSSHLT 491
+ G+A + YL N +H+D+ + NIL++ + ++SDFGL+ L T
Sbjct: 149 LVGMLRGIAAGMKYLAN---MNYVHRDLAARNILVNSNLVCKVSDFGLSRVLE-DDPEAT 204
Query: 492 CTDVAGTFG--YLAPEYFMHGKVSEKIDVYAFGIVLLELLS-GKKP 534
T G + APE + K + DV++FGIV+ E+++ G++P
Sbjct: 205 YTTSGGKIPIRWTAPEAISYRKFTSASDVWSFGIVMWEVMTYGERP 250
>pdb|3S95|A Chain A, Crystal Structure Of The Human Limk1 Kinase Domain In
Complex With Staurosporine
pdb|3S95|B Chain B, Crystal Structure Of The Human Limk1 Kinase Domain In
Complex With Staurosporine
Length = 310
Score = 79.3 bits (194), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 52/207 (25%), Positives = 101/207 (48%), Gaps = 20/207 (9%)
Query: 338 LVGKGGHSHVYRGCLPDGKELAV--KILKPSEDVLKEFASEIEIITALHHRNIISLFGFC 395
++GKG + + E+ V ++++ E+ + F E++++ L H N++ G
Sbjct: 17 VLGKGCFGQAIKVTHRETGEVMVMKELIRFDEETQRTFLKEVKVMRCLEHPNVLKFIGVL 76
Query: 396 FEDNNLLLVYDFLSRGSLEENLHGNKKDGNAFGWTERYKVAVGVAEALDYLHNSCEQPVI 455
++D L + +++ G+L + K + + W++R A +A + YLH+ +I
Sbjct: 77 YKDKRLNFITEYIKGGTLRGII---KSMDSQYPWSQRVSFAKDIASGMAYLHS---MNII 130
Query: 456 HKDVKSSNILLSDDFEPQLSDFGLASWLSTSSSH------LTCTD------VAGTFGYLA 503
H+D+ S N L+ ++ ++DFGLA + + L D V G ++A
Sbjct: 131 HRDLNSHNCLVRENKNVVVADFGLARLMVDEKTQPEGLRSLKKPDRKKRYTVVGNPYWMA 190
Query: 504 PEYFMHGKVSEKIDVYAFGIVLLELLS 530
PE EK+DV++FGIVL E++
Sbjct: 191 PEMINGRSYDEKVDVFSFGIVLCEIIG 217
>pdb|3R21|A Chain A, Design, Synthesis, And Biological Evaluation Of
Pyrazolopyridine- Sulfonamides As Potent
Multiple-Mitotic Kinase (Mmk) Inhibitors (Part I)
pdb|3R22|A Chain A, Design, Synthesis, And Biological Evaluation Of
Pyrazolopyridine- Sulfonamides As Potent
Multiple-Mitotic Kinase (Mmk) Inhibitors (Part I)
pdb|4DHF|A Chain A, Structure Of Aurora A Mutant Bound To Biogenidec Cpd 15
pdb|4DHF|B Chain B, Structure Of Aurora A Mutant Bound To Biogenidec Cpd 15
Length = 271
Score = 79.3 bits (194), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 59/204 (28%), Positives = 97/204 (47%), Gaps = 16/204 (7%)
Query: 339 VGKGGHSHVYRGCLPDGKE-LAVKILKPSE----DVLKEFASEIEIITALHHRNIISLFG 393
+GKG +VY K LA+K+L ++ V + E+EI + L H NI+ L+G
Sbjct: 19 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 78
Query: 394 FCFEDNNLLLVYDFLSRGSLEENLHGNKKDGNAFGWTERYKVAVGVAEALDYLHNSCEQP 453
+ + + L+ ++ G++ L K F +A AL Y H+ +
Sbjct: 79 YFHDATRVYLILEYAPLGTVYRELQKLSK----FDEQRTATYITELANALSYCHS---KR 131
Query: 454 VIHKDVKSSNILLSDDFEPQLSDFGLASWLSTSSSHLTCTDVAGTFGYLAPEYFMHGKVS 513
VIH+D+K N+LL E +++DFG + +S D+ GT YL PE
Sbjct: 132 VIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRR----DDLCGTLDYLPPEMIEGRMHD 187
Query: 514 EKIDVYAFGIVLLELLSGKKPINS 537
EK+D+++ G++ E L GK P +
Sbjct: 188 EKVDLWSLGVLCYEFLVGKPPFEA 211
>pdb|2ZV7|A Chain A, Lyn Tyrosine Kinase Domain, Apo Form
pdb|2ZV8|A Chain A, Lyn Tyrosine Kinase Domain-Amp-Pnp Complex
pdb|2ZV9|A Chain A, Lyn Tyrosine Kinase Domain-Pp2 Complex
pdb|2ZVA|A Chain A, Lyn Tyrosine Kinase Domain-dasatinib Complex
Length = 279
Score = 79.3 bits (194), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 49/197 (24%), Positives = 102/197 (51%), Gaps = 7/197 (3%)
Query: 339 VGKGGHSHVYRGCLPDGKELAVKILKPSEDVLKEFASEIEIITALHHRNIISLFGFCFED 398
+G G V+ G + ++AVK LKP ++ F E ++ L H ++ L+ ++
Sbjct: 20 LGAGQFGEVWMGYYNNSTKVAVKTLKPGTMSVQAFLEEANLMKTLQHDKLVRLYAVVTKE 79
Query: 399 NNLLLVYDFLSRGSLEENLHGNKKDGNAFGWTERYKVAVGVAEALDYLHNSCEQPVIHKD 458
+ ++ +F+++GSL + L + +G + + +AE + Y+ + IH+D
Sbjct: 80 EPIYIITEFMAKGSLLDFLKSD--EGGKVLLPKLIDFSAQIAEGMAYIER---KNYIHRD 134
Query: 459 VKSSNILLSDDFEPQLSDFGLASWLSTSSSHLTCTDVAGTFGYLAPEYFMHGKVSEKIDV 518
++++N+L+S+ +++DFGLA + + + + APE G + K +V
Sbjct: 135 LRAANVLVSESLMCKIADFGLAR-VIEDNEYTAREGAKFPIKWTAPEAINFGCFTIKSNV 193
Query: 519 YAFGIVLLELLS-GKKP 534
++FGI+L E+++ GK P
Sbjct: 194 WSFGILLYEIVTYGKIP 210
>pdb|3NUN|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Lead
Compound
Length = 292
Score = 79.3 bits (194), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 63/208 (30%), Positives = 103/208 (49%), Gaps = 14/208 (6%)
Query: 338 LVGKGGHSHVYRGC-LPDGKELAVKILKPSEDVLKE-----FASEIEIITALHHRNIISL 391
++G+G S V L +E A+KIL+ ++KE E ++++ L H + L
Sbjct: 21 ILGEGSFSTVVLARELATSREYAIKILE-KRHIIKENKVPYVTRERDVMSRLDHPFFVKL 79
Query: 392 FGFCFEDNNLLLVYDFLSRGSLEENLHGNKKDGNAFGWTERYKVAVGVAEALDYLHNSCE 451
+ F F+D+ L Y LS E L +K G+ R+ A + AL+YLH
Sbjct: 80 Y-FTFQDDEKL--YFGLSYAKNGELLKYIRKIGSFDETCTRFYTA-EIVSALEYLHG--- 132
Query: 452 QPVIHKDVKSSNILLSDDFEPQLSDFGLASWLSTSSSHLTCTDVAGTFGYLAPEYFMHGK 511
+ +IH+D+K NILL++D Q++DFG A LS S GT Y++PE
Sbjct: 133 KGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKS 192
Query: 512 VSEKIDVYAFGIVLLELLSGKKPINSEN 539
+ D++A G ++ +L++G P + N
Sbjct: 193 ACKSSDLWALGCIIYQLVAGLPPFRAGN 220
>pdb|3NAX|A Chain A, Pdk1 In Complex With Inhibitor Mp7
Length = 311
Score = 79.3 bits (194), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 63/208 (30%), Positives = 103/208 (49%), Gaps = 14/208 (6%)
Query: 338 LVGKGGHSHVYRGC-LPDGKELAVKILKPSEDVLKE-----FASEIEIITALHHRNIISL 391
++G+G S V L +E A+KIL+ ++KE E ++++ L H + L
Sbjct: 36 ILGEGSFSTVVLARELATSREYAIKILE-KRHIIKENKVPYVTRERDVMSRLDHPFFVKL 94
Query: 392 FGFCFEDNNLLLVYDFLSRGSLEENLHGNKKDGNAFGWTERYKVAVGVAEALDYLHNSCE 451
+ F F+D+ L Y LS E L +K G+ R+ A + AL+YLH
Sbjct: 95 Y-FTFQDDEKL--YFGLSYAKNGELLKYIRKIGSFDETCTRFYTA-EIVSALEYLHG--- 147
Query: 452 QPVIHKDVKSSNILLSDDFEPQLSDFGLASWLSTSSSHLTCTDVAGTFGYLAPEYFMHGK 511
+ +IH+D+K NILL++D Q++DFG A LS S GT Y++PE
Sbjct: 148 KGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANSFVGTAQYVSPELLTEKS 207
Query: 512 VSEKIDVYAFGIVLLELLSGKKPINSEN 539
+ D++A G ++ +L++G P + N
Sbjct: 208 ACKSSDLWALGCIIYQLVAGLPPFRAGN 235
>pdb|1MQ4|A Chain A, Crystal Structure Of Aurora-A Protein Kinase
pdb|2NP8|A Chain A, Structural Basis For The Inhibition Of Aurora A Kinase By
A Novel Class Of High Affinity Disubstituted Pyrimidine
Inhibitors
pdb|2X81|A Chain A, Structure Of Aurora A In Complex With Mln8054
pdb|3MYG|A Chain A, Aurora A Kinase Complexed With Sch 1473759
pdb|3VAP|A Chain A, Synthesis And Sar Studies Of Imidazo-[1,2-A]-Pyrazine
Aurora Kinase Inhibitors With Improved Off Target Kinase
Selectivity
Length = 272
Score = 79.3 bits (194), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 59/204 (28%), Positives = 96/204 (47%), Gaps = 16/204 (7%)
Query: 339 VGKGGHSHVYRGCLPDGKE-LAVKILKPSE----DVLKEFASEIEIITALHHRNIISLFG 393
+GKG +VY K LA+K+L ++ V + E+EI + L H NI+ L+G
Sbjct: 20 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 79
Query: 394 FCFEDNNLLLVYDFLSRGSLEENLHGNKKDGNAFGWTERYKVAVGVAEALDYLHNSCEQP 453
+ + + L+ ++ G++ L K F +A AL Y H+ +
Sbjct: 80 YFHDATRVYLILEYAPLGTVYRELQKLSK----FDEQRTATYITELANALSYCHS---KR 132
Query: 454 VIHKDVKSSNILLSDDFEPQLSDFGLASWLSTSSSHLTCTDVAGTFGYLAPEYFMHGKVS 513
VIH+D+K N+LL E +++DFG + +S C GT YL PE
Sbjct: 133 VIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTTLC----GTLDYLPPEMIEGRMHD 188
Query: 514 EKIDVYAFGIVLLELLSGKKPINS 537
EK+D+++ G++ E L GK P +
Sbjct: 189 EKVDLWSLGVLCYEFLVGKPPFEA 212
>pdb|3D7T|A Chain A, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 269
Score = 79.3 bits (194), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 60/198 (30%), Positives = 103/198 (52%), Gaps = 14/198 (7%)
Query: 339 VGKGGHSHVYRGCLPDGKELAVKILKPSEDVLKEFASEIEIITALHHRNIISLFGFCFED 398
+GKG V G G ++AVK +K ++ + F +E ++T L H N++ L G E+
Sbjct: 20 IGKGEFGDVMLGDY-RGNKVAVKCIK-NDATAQAFLAEASVMTQLRHSNLVQLLGVIVEE 77
Query: 399 -NNLLLVYDFLSRGSLEENLHGNKKDGNAFGWTERYKVAVGVAEALDYLHNSCEQPVIHK 457
L +V +++++GSL + L + + G K ++ V EA++YL + +H+
Sbjct: 78 KGGLYIVTEYMAKGSLVDYLRSRGR--SVLGGDCLLKFSLDVCEAMEYLEGN---NFVHR 132
Query: 458 DVKSSNILLSDDFEPQLSDFGLASWLSTSSSHLTCTDVAGTFGYLAPEYFMHGKVSEKID 517
D+ + N+L+S+D ++SDFGL T + T + APE S K D
Sbjct: 133 DLAARNVLVSEDNVAKVSDFGL-----TKEASSTQDTGKLPVKWTAPEALREAAFSTKSD 187
Query: 518 VYAFGIVLLELLS-GKKP 534
V++FGI+L E+ S G+ P
Sbjct: 188 VWSFGILLWEIYSFGRVP 205
>pdb|3MA6|A Chain A, Crystal Structure Of Kinase Domain Of Tgcdpk1 In Presence
Of 3brb-Pp1
pdb|3MA6|B Chain B, Crystal Structure Of Kinase Domain Of Tgcdpk1 In Presence
Of 3brb-Pp1
Length = 298
Score = 79.3 bits (194), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 60/193 (31%), Positives = 96/193 (49%), Gaps = 20/193 (10%)
Query: 355 GKELAVKILKPSEDVLK----EFASEIEIITALHHRNIISLFGFCFEDNNLL-LVYDFLS 409
G+E AVK++ + K E++++ L H NI+ L+ F FED LV + +
Sbjct: 57 GQECAVKVISKRQVKQKTDKESLLREVQLLKQLDHPNIMKLYEF-FEDKGYFYLVGEVYT 115
Query: 410 RGSLEENLHGNKKDGNAFGWTERYKVAVGVAEALDYLHNSCEQPVIHKDVKSSNILL--- 466
G L + + K+ F + ++ V + Y+H + ++H+D+K N+LL
Sbjct: 116 GGELFDEIISRKR----FSEVDAARIIRQVLSGITYMHKN---KIVHRDLKPENLLLESK 168
Query: 467 SDDFEPQLSDFGLASWLSTSSSHLTCTDVAGTFGYLAPEYFMHGKVSEKIDVYAFGIVLL 526
S D ++ DFGL++ S D GT Y+APE +HG EK DV++ G++L
Sbjct: 169 SKDANIRIIDFGLSTHFEASKK---MKDKIGTAYYIAPE-VLHGTYDEKCDVWSTGVILY 224
Query: 527 ELLSGKKPINSEN 539
LLSG P N N
Sbjct: 225 ILLSGCPPFNGAN 237
>pdb|3PWY|A Chain A, Crystal Structure Of An Extender (Spd28345)-Modified Human
Pdk1 Complex 2
Length = 311
Score = 79.3 bits (194), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 62/209 (29%), Positives = 103/209 (49%), Gaps = 16/209 (7%)
Query: 338 LVGKGGHSHVYRGC-LPDGKELAVKILKPSEDVLKE-----FASEIEIITALHHRNIISL 391
++G+G S V L +E A+KIL+ ++KE E ++++ L H + L
Sbjct: 39 ILGEGSFSTVVLARELATSREYAIKILE-KRHIIKENKVPYVTRERDVMSRLDHPFFVKL 97
Query: 392 FGFCFEDN-NLLLVYDFLSRGSLEENLHGNKKDGNAFGWTERYKVAVGVAEALDYLHNSC 450
+ F F+D+ L + G L L +K G+ R+ A + AL+YLH
Sbjct: 98 Y-FTFQDDEKLYFGLSYAKNGCL---LKYIRKIGSFDETCTRFYTA-EIVSALEYLHG-- 150
Query: 451 EQPVIHKDVKSSNILLSDDFEPQLSDFGLASWLSTSSSHLTCTDVAGTFGYLAPEYFMHG 510
+ +IH+D+K NILL++D Q++DFG A LS S GT Y++PE
Sbjct: 151 -KGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANSFVGTAQYVSPELLTEK 209
Query: 511 KVSEKIDVYAFGIVLLELLSGKKPINSEN 539
S+ D++A G ++ +L++G P + N
Sbjct: 210 SASKSSDLWALGCIIYQLVAGLPPFRAGN 238
>pdb|1K2P|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase Domain
pdb|1K2P|B Chain B, Crystal Structure Of Bruton's Tyrosine Kinase Domain
Length = 263
Score = 79.3 bits (194), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 62/261 (23%), Positives = 124/261 (47%), Gaps = 14/261 (5%)
Query: 332 NFLPEYLVGKGGHSHVYRGCLPDGKELAVKILKPSEDVLKEFASEIEIITALHHRNIISL 391
FL E +G G V G ++A+K++K EF E +++ L H ++ L
Sbjct: 7 TFLKE--LGTGQFGVVKYGKWRGQYDVAIKMIKEGSMSEDEFIEEAKVMMNLSHEKLVQL 64
Query: 392 FGFCFEDNNLLLVYDFLSRGSLEENLHGNKKDGNAFGWTERYKVAVGVAEALDYLHNSCE 451
+G C + + ++ ++++ G L L+ ++ + F + ++ V EA++YL +
Sbjct: 65 YGVCTKQRPIFIITEYMANGCL---LNYLREMRHRFQTQQLLEMCKDVCEAMEYLES--- 118
Query: 452 QPVIHKDVKSSNILLSDDFEPQLSDFGLASWLSTSSSHLTCTDVAGTFGYLAPEYFMHGK 511
+ +H+D+ + N L++D ++SDFGL+ ++ + + + PE M+ K
Sbjct: 119 KQFLHRDLAARNCLVNDQGVVKVSDFGLSRYV-LDDEYTSSVGSKFPVRWSPPEVLMYSK 177
Query: 512 VSEKIDVYAFGIVLLELLS-GKKPI----NSENPKGQESLVMWAKPILKDGKVSQLLDPS 566
S K D++AFG+++ E+ S GK P NSE + + +P L KV ++
Sbjct: 178 FSSKSDIWAFGVLMWEIYSLGKMPYERFTNSETAEHIAQGLRLYRPHLASEKVYTIMYSC 237
Query: 567 LDTDYDNDQIERMVLAATLSI 587
D +++L+ L +
Sbjct: 238 WHEKADERPTFKILLSNILDV 258
>pdb|3P08|A Chain A, Crystal Structure Of The Human Btk Kinase Domain
pdb|3P08|B Chain B, Crystal Structure Of The Human Btk Kinase Domain
Length = 267
Score = 79.3 bits (194), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 62/261 (23%), Positives = 124/261 (47%), Gaps = 14/261 (5%)
Query: 332 NFLPEYLVGKGGHSHVYRGCLPDGKELAVKILKPSEDVLKEFASEIEIITALHHRNIISL 391
FL E +G G V G ++A+K++K EF E +++ L H ++ L
Sbjct: 11 TFLKE--LGTGQFGVVKYGKWRGQYDVAIKMIKEGSMSEDEFIEEAKVMMNLSHEKLVQL 68
Query: 392 FGFCFEDNNLLLVYDFLSRGSLEENLHGNKKDGNAFGWTERYKVAVGVAEALDYLHNSCE 451
+G C + + ++ ++++ G L L+ ++ + F + ++ V EA++YL +
Sbjct: 69 YGVCTKQRPIFIITEYMANGCL---LNYLREMRHRFQTQQLLEMCKDVCEAMEYLES--- 122
Query: 452 QPVIHKDVKSSNILLSDDFEPQLSDFGLASWLSTSSSHLTCTDVAGTFGYLAPEYFMHGK 511
+ +H+D+ + N L++D ++SDFGL+ ++ + + + PE M+ K
Sbjct: 123 KQFLHRDLAARNCLVNDQGVVKVSDFGLSRYV-LDDEYTSSVGSKFPVRWSPPEVLMYSK 181
Query: 512 VSEKIDVYAFGIVLLELLS-GKKPI----NSENPKGQESLVMWAKPILKDGKVSQLLDPS 566
S K D++AFG+++ E+ S GK P NSE + + +P L KV ++
Sbjct: 182 FSSKSDIWAFGVLMWEIYSLGKMPYERFTNSETAEHIAQGLRLYRPHLASEKVYTIMYSC 241
Query: 567 LDTDYDNDQIERMVLAATLSI 587
D +++L+ L +
Sbjct: 242 WHEKADERPTFKILLSNILDV 262
>pdb|3K54|A Chain A, Structures Of Human Bruton's Tyrosine Kinase In Active And
Inactive Conformations Suggests A Mechanism Of
Activation For Tec Family Kinases
Length = 283
Score = 79.0 bits (193), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 64/263 (24%), Positives = 123/263 (46%), Gaps = 18/263 (6%)
Query: 332 NFLPEYLVGKGGHSHVYRGCLPDGKELAVKILKPSEDVLKEFASEIEIITALHHRNIISL 391
FL E +G G V G ++A+K++K EF E +++ L H ++ L
Sbjct: 27 TFLKE--LGTGQFGVVKYGKWRGQYDVAIKMIKEGSMSEDEFIEEAKVMMNLSHEKLVQL 84
Query: 392 FGFCFEDNNLLLVYDFLSRGSLEENLHGNKKDGNAFGWTERYKVAVGVAEALDYLHNSCE 451
+G C + + ++ ++++ G L L + + F + ++ V EA++YL +
Sbjct: 85 YGVCTKQRPIFIITEYMANGCLLNYLREMR---HRFQTQQLLEMCKDVCEAMEYLES--- 138
Query: 452 QPVIHKDVKSSNILLSDDFEPQLSDFGLASWLSTSSSHLTCTDVAGTF--GYLAPEYFMH 509
+ +H+D+ + N L++D ++SDFGL+ ++ + V F + PE M+
Sbjct: 139 KQFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEE---TSSVGSKFPVRWSPPEVLMY 195
Query: 510 GKVSEKIDVYAFGIVLLELLS-GKKP----INSENPKGQESLVMWAKPILKDGKVSQLLD 564
K S K D++AFG+++ E+ S GK P NSE + + +P L KV ++
Sbjct: 196 SKFSSKSDIWAFGVLMWEIYSLGKMPYERFTNSETAEHIAQGLRLYRPHLASEKVYTIMY 255
Query: 565 PSLDTDYDNDQIERMVLAATLSI 587
D +++L+ L +
Sbjct: 256 SCWHEKADERPTFKILLSNILDV 278
>pdb|3NAY|A Chain A, Pdk1 In Complex With Inhibitor Mp6
pdb|3NAY|B Chain B, Pdk1 In Complex With Inhibitor Mp6
Length = 311
Score = 79.0 bits (193), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 63/208 (30%), Positives = 103/208 (49%), Gaps = 14/208 (6%)
Query: 338 LVGKGGHSHVYRGC-LPDGKELAVKILKPSEDVLKE-----FASEIEIITALHHRNIISL 391
++G+G S V L +E A+KIL+ ++KE E ++++ L H + L
Sbjct: 36 ILGEGSFSTVVLARELATSREYAIKILE-KRHIIKENKVPYVTRERDVMSRLDHPFFVKL 94
Query: 392 FGFCFEDNNLLLVYDFLSRGSLEENLHGNKKDGNAFGWTERYKVAVGVAEALDYLHNSCE 451
+ F F+D+ L Y LS E L +K G+ R+ A + AL+YLH
Sbjct: 95 Y-FTFQDDEKL--YFGLSYAKNGELLKYIRKIGSFDETCTRFYTA-EIVSALEYLHG--- 147
Query: 452 QPVIHKDVKSSNILLSDDFEPQLSDFGLASWLSTSSSHLTCTDVAGTFGYLAPEYFMHGK 511
+ +IH+D+K NILL++D Q++DFG A LS S GT Y++PE
Sbjct: 148 KGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKS 207
Query: 512 VSEKIDVYAFGIVLLELLSGKKPINSEN 539
+ D++A G ++ +L++G P + N
Sbjct: 208 ACKSSDLWALGCIIYQLVAGLPPFRAGN 235
>pdb|1YOJ|A Chain A, Crystal Structure Of Src Kinase Domain
pdb|1YOJ|B Chain B, Crystal Structure Of Src Kinase Domain
pdb|1YOM|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Purvalanol A
pdb|1YOM|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Purvalanol A
Length = 283
Score = 79.0 bits (193), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 51/200 (25%), Positives = 102/200 (51%), Gaps = 8/200 (4%)
Query: 336 EYLVGKGGHSHVYRGCLPDGKELAVKILKPSEDVLKEFASEIEIITALHHRNIISLFGFC 395
E +G+G V+ G +A+K LKP + F E +++ L H ++ L+
Sbjct: 20 EVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQLYAVV 79
Query: 396 FEDNNLLLVYDFLSRGSLEENLHGNKKDGNAFGWTERYKVAVGVAEALDYLHNSCEQPVI 455
E+ + +V +++++GSL + L G + G + ++ +A + Y+ +
Sbjct: 80 SEE-PIYIVTEYMNKGSLLDFLKG--ETGKYLRLPQLVDMSAQIASGMAYVER---MNYV 133
Query: 456 HKDVKSSNILLSDDFEPQLSDFGLASWLSTSSSHLTCTDVAGTFGYLAPEYFMHGKVSEK 515
H+D++++NIL+ ++ +++DFGLA L + + APE ++G+ + K
Sbjct: 134 HRDLRAANILVGENLVCKVADFGLAR-LIEDNEWTARQGAKFPIKWTAPEAALYGRFTIK 192
Query: 516 IDVYAFGIVLLELLS-GKKP 534
DV++FGI+L EL + G+ P
Sbjct: 193 SDVWSFGILLTELTTKGRVP 212
>pdb|3OCS|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase In Complex
With Inhibitor Cgi1746
Length = 271
Score = 79.0 bits (193), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 62/261 (23%), Positives = 122/261 (46%), Gaps = 14/261 (5%)
Query: 332 NFLPEYLVGKGGHSHVYRGCLPDGKELAVKILKPSEDVLKEFASEIEIITALHHRNIISL 391
FL E +G G V G ++A+K++K EF E +++ L H ++ L
Sbjct: 12 TFLKE--LGTGQFGVVKYGKWRGQYDVAIKMIKEGSMSEDEFIEEAKVMMNLSHEKLVQL 69
Query: 392 FGFCFEDNNLLLVYDFLSRGSLEENLHGNKKDGNAFGWTERYKVAVGVAEALDYLHNSCE 451
+G C + + ++ ++++ G L L + + F + ++ V EA++YL +
Sbjct: 70 YGVCTKQRPIFIITEYMANGCLLNYLREMR---HRFQTQQLLEMCKDVCEAMEYLES--- 123
Query: 452 QPVIHKDVKSSNILLSDDFEPQLSDFGLASWLSTSSSHLTCTDVAGTFGYLAPEYFMHGK 511
+ +H+D+ + N L++D ++SDFGL+ ++ + + + PE M+ K
Sbjct: 124 KQFLHRDLAARNCLVNDQGVVKVSDFGLSRYV-LDDEYTSSVGSKFPVRWSPPEVLMYSK 182
Query: 512 VSEKIDVYAFGIVLLELLS-GKKPI----NSENPKGQESLVMWAKPILKDGKVSQLLDPS 566
S K D++AFG+++ E+ S GK P NSE + + +P L KV ++
Sbjct: 183 FSSKSDIWAFGVLMWEIYSLGKMPYERFTNSETAEHIAQGLRLYRPHLASEKVYTIMYSC 242
Query: 567 LDTDYDNDQIERMVLAATLSI 587
D +++L+ L +
Sbjct: 243 WHEKADERPTFKILLSNILDV 263
>pdb|2XCK|A Chain A, Crystal Structure Of Pdk1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 309
Score = 79.0 bits (193), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 59/193 (30%), Positives = 96/193 (49%), Gaps = 13/193 (6%)
Query: 352 LPDGKELAVKILKPSEDVLKE-----FASEIEIITALHHRNIISLFGFCFEDNNLLLVYD 406
L +E A+KIL+ ++KE E ++++ L H + L+ F F+D+ L Y
Sbjct: 52 LATSREYAIKILE-KRHIIKENKVPYVTRERDVMSRLDHPFFVKLY-FTFQDDEKL--YF 107
Query: 407 FLSRGSLEENLHGNKKDGNAFGWTERYKVAVGVAEALDYLHNSCEQPVIHKDVKSSNILL 466
LS E L +K G+ R+ A + AL+YLH + +IH+D+K NILL
Sbjct: 108 GLSYAKNGELLKYIRKIGSFDETCTRFYTA-EIVSALEYLHG---KGIIHRDLKPENILL 163
Query: 467 SDDFEPQLSDFGLASWLSTSSSHLTCTDVAGTFGYLAPEYFMHGKVSEKIDVYAFGIVLL 526
++D Q++DFG A LS S GT Y++PE + D++A G ++
Sbjct: 164 NEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSACKSSDLWALGCIIY 223
Query: 527 ELLSGKKPINSEN 539
+L++G P + N
Sbjct: 224 QLVAGLPPFRAGN 236
>pdb|3GEN|A Chain A, The 1.6 A Crystal Structure Of Human Bruton's Tyrosine
Kinase Bound To A Pyrrolopyrimidine-Containing Compound
Length = 283
Score = 79.0 bits (193), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 62/261 (23%), Positives = 122/261 (46%), Gaps = 14/261 (5%)
Query: 332 NFLPEYLVGKGGHSHVYRGCLPDGKELAVKILKPSEDVLKEFASEIEIITALHHRNIISL 391
FL E +G G V G ++A+K++K EF E +++ L H ++ L
Sbjct: 27 TFLKE--LGTGQFGVVKYGKWRGQYDVAIKMIKEGSMSEDEFIEEAKVMMNLSHEKLVQL 84
Query: 392 FGFCFEDNNLLLVYDFLSRGSLEENLHGNKKDGNAFGWTERYKVAVGVAEALDYLHNSCE 451
+G C + + ++ ++++ G L L + + F + ++ V EA++YL +
Sbjct: 85 YGVCTKQRPIFIITEYMANGCLLNYLREMR---HRFQTQQLLEMCKDVCEAMEYLES--- 138
Query: 452 QPVIHKDVKSSNILLSDDFEPQLSDFGLASWLSTSSSHLTCTDVAGTFGYLAPEYFMHGK 511
+ +H+D+ + N L++D ++SDFGL+ ++ + + + PE M+ K
Sbjct: 139 KQFLHRDLAARNCLVNDQGVVKVSDFGLSRYV-LDDEYTSSVGSKFPVRWSPPEVLMYSK 197
Query: 512 VSEKIDVYAFGIVLLELLS-GKKP----INSENPKGQESLVMWAKPILKDGKVSQLLDPS 566
S K D++AFG+++ E+ S GK P NSE + + +P L KV ++
Sbjct: 198 FSSKSDIWAFGVLMWEIYSLGKMPYERFTNSETAEHIAQGLRLYRPHLASEKVYTIMYSC 257
Query: 567 LDTDYDNDQIERMVLAATLSI 587
D +++L+ L +
Sbjct: 258 WHEKADERPTFKILLSNILDV 278
>pdb|3CLY|A Chain A, Crystal Structure Of Fgf Receptor 2 (Fgfr2) Kinase Domains
Trapped In Trans-Phosphorylation Reaction
Length = 334
Score = 79.0 bits (193), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 48/188 (25%), Positives = 97/188 (51%), Gaps = 18/188 (9%)
Query: 358 LAVKILK--PSEDVLKEFASEIEIITAL-HHRNIISLFGFCFEDNNLLLVYDFLSRGSLE 414
+AVK+LK +E L + SE+E++ + H+NII+L G C +D L ++ ++ S+G+L
Sbjct: 70 VAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLR 129
Query: 415 ENLHGNKKDGNAFGW------------TERYKVAVGVAEALDYLHNSCEQPVIHKDVKSS 462
E L + G + + + +A ++YL Q IH+D+ +
Sbjct: 130 EYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYL---ASQKCIHRDLAAR 186
Query: 463 NILLSDDFEPQLSDFGLASWLSTSSSHLTCTDVAGTFGYLAPEYFMHGKVSEKIDVYAFG 522
N+L++++ +++DFGLA ++ T+ ++APE + + DV++FG
Sbjct: 187 NVLVTENNVMKIADFGLARDINNIDXXKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFG 246
Query: 523 IVLLELLS 530
+++ E+ +
Sbjct: 247 VLMWEIFT 254
>pdb|3IS5|A Chain A, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|B Chain B, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|C Chain C, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|D Chain D, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|E Chain E, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|F Chain F, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
Length = 285
Score = 79.0 bits (193), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 60/171 (35%), Positives = 91/171 (53%), Gaps = 12/171 (7%)
Query: 370 LKEFASEIEIITALHHRNIISLFGFCFED-NNLLLVYDFLSRGSLEENLHGNKKDGNAFG 428
+++ +EIE++ +L H NII +F FED +N+ +V + G L E + + G A
Sbjct: 64 MEQIEAEIEVLKSLDHPNIIKIFE-VFEDYHNMYIVMETCEGGELLERIVSAQARGKALS 122
Query: 429 WTERYKVAVGVAEALDYLHNSCEQPVIHKDVKSSNILLSDD--FEP-QLSDFGLASWLST 485
++ + AL Y H+ Q V+HKD+K NIL D P ++ DFGLA L
Sbjct: 123 EGYVAELMKQMMNALAYFHS---QHVVHKDLKPENILFQDTSPHSPIKIIDFGLAE-LFK 178
Query: 486 SSSHLTCTDVAGTFGYLAPEYFMHGKVSEKIDVYAFGIVLLELLSGKKPIN 536
S H T+ AGT Y+APE F V+ K D+++ G+V+ LL+G P
Sbjct: 179 SDEH--STNAAGTALYMAPEVFKR-DVTFKCDIWSAGVVMYFLLTGCLPFT 226
>pdb|3PIX|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-Isopropyl-7-
(4-Methyl-Piperazin-1-Yl)-4-(5-Methyl-2h-Pyrazol-3-
Ylamino)-2h- Phthalazin-1-One
pdb|3PIY|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With R406
pdb|3PIZ|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
(5-Amino-1-O-
Tolyl-1h-Pyrazol-4-Yl)-[3-(1-Methanesulfonyl-Piperidin-
4-Yl)-Phenyl]- Methanone
pdb|3PJ1|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
3-(2,6-Dichloro-
Phenyl)-7-[4-(2-Diethylamino-Ethoxy)-Phenylamino]-1-
Methyl-3,4- Dihydro-1h-Pyrimido[4,5-D]pyrimidin-2-One
pdb|3PJ2|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-[4-(2-
Diethylamino-Ethoxy)-Phenylamino]-6-(4-Fluoro-Phenoxy)-
8-Methyl-8h- Pyrido[2,3-D]pyrimidin-7-One
pdb|3PJ3|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-Methyl-5-[(E)-
(3-Phenyl-Acryloyl)amino]-N-(2-Phenyl-3h-Imidazo[4,
5-B]pyridin-6-Yl)- Benzamide
Length = 274
Score = 79.0 bits (193), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 62/261 (23%), Positives = 122/261 (46%), Gaps = 14/261 (5%)
Query: 332 NFLPEYLVGKGGHSHVYRGCLPDGKELAVKILKPSEDVLKEFASEIEIITALHHRNIISL 391
FL E +G G V G ++A+K++K EF E +++ L H ++ L
Sbjct: 18 TFLKE--LGTGQFGVVKYGKWRGQYDVAIKMIKEGSMSEDEFIEEAKVMMNLSHEKLVQL 75
Query: 392 FGFCFEDNNLLLVYDFLSRGSLEENLHGNKKDGNAFGWTERYKVAVGVAEALDYLHNSCE 451
+G C + + ++ ++++ G L L + + F + ++ V EA++YL +
Sbjct: 76 YGVCTKQRPIFIITEYMANGCLLNYLREMR---HRFQTQQLLEMCKDVCEAMEYLES--- 129
Query: 452 QPVIHKDVKSSNILLSDDFEPQLSDFGLASWLSTSSSHLTCTDVAGTFGYLAPEYFMHGK 511
+ +H+D+ + N L++D ++SDFGL+ ++ + + + PE M+ K
Sbjct: 130 KQFLHRDLAARNCLVNDQGVVKVSDFGLSRYV-LDDEYTSSVGSKFPVRWSPPEVLMYSK 188
Query: 512 VSEKIDVYAFGIVLLELLS-GKKPI----NSENPKGQESLVMWAKPILKDGKVSQLLDPS 566
S K D++AFG+++ E+ S GK P NSE + + +P L KV ++
Sbjct: 189 FSSKSDIWAFGVLMWEIYSLGKMPYERFTNSETAEHIAQGLRLYRPHLASEKVYTIMYSC 248
Query: 567 LDTDYDNDQIERMVLAATLSI 587
D +++L+ L +
Sbjct: 249 WHEKADERPTFKILLSNILDV 269
>pdb|3F61|A Chain A, Crystal Structure Of M. Tuberculosis Pknb
Leu33aspVAL222ASP DOUBLE MUTANT IN COMPLEX WITH ADP
Length = 311
Score = 79.0 bits (193), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 61/215 (28%), Positives = 112/215 (52%), Gaps = 21/215 (9%)
Query: 338 LVGKGGHSHVYRGC-LPDGKELAVKILKPSEDVLKE------FASEIEIITALHHRNIIS 390
++G GG S V+ L D +++AVK+L+ D+ ++ F E + AL+H I++
Sbjct: 19 ILGFGGMSEVHLARDLRDHRDVAVKVLR--ADLARDPSFYLRFRREAQNAAALNHPAIVA 76
Query: 391 LFGFCFEDNNL----LLVYDFLSRGSLEENLHGNKKDGNAFGWTERYKVAVGVAEALDYL 446
++ + +V +++ +L + +H T + + V +A+A L
Sbjct: 77 VYDTGEAETPAGPLPYIVMEYVDGVTLRDIVHTEGP------MTPKRAIEV-IADACQAL 129
Query: 447 HNSCEQPVIHKDVKSSNILLSDDFEPQLSDFGLASWLSTSSSHLTCTD-VAGTFGYLAPE 505
+ S + +IH+DVK +NI++S ++ DFG+A ++ S + +T T V GT YL+PE
Sbjct: 130 NFSHQNGIIHRDVKPANIMISATNAVKVMDFGIARAIADSGNSVTQTAAVIGTAQYLSPE 189
Query: 506 YFMHGKVSEKIDVYAFGIVLLELLSGKKPINSENP 540
V + DVY+ G VL E+L+G+ P ++P
Sbjct: 190 QARGDSVDARSDVYSLGCVLYEVLTGEPPFTGDSP 224
>pdb|3ORI|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|B Chain B, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|C Chain C, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|D Chain D, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORK|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 2)
pdb|3ORL|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 3)
pdb|3ORO|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 4)
pdb|3ORP|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 5)
pdb|3ORT|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 6)
Length = 311
Score = 79.0 bits (193), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 61/215 (28%), Positives = 112/215 (52%), Gaps = 21/215 (9%)
Query: 338 LVGKGGHSHVYRGC-LPDGKELAVKILKPSEDVLKE------FASEIEIITALHHRNIIS 390
++G GG S V+ L D +++AVK+L+ D+ ++ F E + AL+H I++
Sbjct: 19 ILGFGGMSEVHLARDLRDHRDVAVKVLR--ADLARDPSFYLRFRREAQNAAALNHPAIVA 76
Query: 391 LFGFCFEDNNL----LLVYDFLSRGSLEENLHGNKKDGNAFGWTERYKVAVGVAEALDYL 446
++ + +V +++ +L + +H T + + V +A+A L
Sbjct: 77 VYDTGEAETPAGPLPYIVMEYVDGVTLRDIVHTEGP------MTPKRAIEV-IADACQAL 129
Query: 447 HNSCEQPVIHKDVKSSNILLSDDFEPQLSDFGLASWLSTSSSHLTCTD-VAGTFGYLAPE 505
+ S + +IH+DVK +NI++S ++ DFG+A ++ S + +T T V GT YL+PE
Sbjct: 130 NFSHQNGIIHRDVKPANIMISATNAVKVMDFGIARAIADSGNSVTQTAAVIGTAQYLSPE 189
Query: 506 YFMHGKVSEKIDVYAFGIVLLELLSGKKPINSENP 540
V + DVY+ G VL E+L+G+ P ++P
Sbjct: 190 QARGDSVDARSDVYSLGCVLYEVLTGEPPFTGDSP 224
>pdb|2PWL|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549h Mutation Responsible For
Crouzon Syndrome.
pdb|2PWL|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549h Mutation Responsible For
Crouzon Syndrome
Length = 324
Score = 79.0 bits (193), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 48/188 (25%), Positives = 97/188 (51%), Gaps = 18/188 (9%)
Query: 358 LAVKILK--PSEDVLKEFASEIEIITAL-HHRNIISLFGFCFEDNNLLLVYDFLSRGSLE 414
+AVK+LK +E L + SE+E++ + H+NII L G C +D L ++ ++ S+G+L
Sbjct: 70 VAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIIHLLGACTQDGPLYVIVEYASKGNLR 129
Query: 415 ENLHGNKKDGNAFGW------------TERYKVAVGVAEALDYLHNSCEQPVIHKDVKSS 462
E L + G + + + +A ++YL Q IH+D+ +
Sbjct: 130 EYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYL---ASQKCIHRDLAAR 186
Query: 463 NILLSDDFEPQLSDFGLASWLSTSSSHLTCTDVAGTFGYLAPEYFMHGKVSEKIDVYAFG 522
N+L++++ +++DFGLA ++ + T+ ++APE + + DV++FG
Sbjct: 187 NVLVTENNVMKIADFGLARDINNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFG 246
Query: 523 IVLLELLS 530
+++ E+ +
Sbjct: 247 VLMWEIFT 254
>pdb|3OY3|A Chain A, Crystal Structure Of Abl T315i Mutant Kinase Domain Bound
With A Dfg- Out Inhibitor Ap24589
pdb|3OY3|B Chain B, Crystal Structure Of Abl T315i Mutant Kinase Domain Bound
With A Dfg- Out Inhibitor Ap24589
Length = 284
Score = 78.6 bits (192), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 54/199 (27%), Positives = 102/199 (51%), Gaps = 10/199 (5%)
Query: 339 VGKGGHSHVYRGCLPD-GKELAVKILKPSEDVLKEFASEIEIITALHHRNIISLFGFCFE 397
+G G + VY G +AVK LK ++EF E ++ + H N++ L G C
Sbjct: 21 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTR 80
Query: 398 DNNLLLVYDFLSRGSLEENLH-GNKKDGNAFGWTERYKVAVGVAEALDYLHNSCEQPVIH 456
+ ++ +F++ G+L + L N+++ +A +A ++ A++YL ++ IH
Sbjct: 81 EPPFYIIIEFMTYGNLLDYLRECNRQEVSA---VVLLYMATQISSAMEYLE---KKNFIH 134
Query: 457 KDVKSSNILLSDDFEPQLSDFGLASWLSTSSSHLTCTDVAGTFGYLAPEYFMHGKVSEKI 516
+D+ + N L+ ++ +++DFGL+ L T ++ + APE + K S K
Sbjct: 135 RDLAARNCLVGENHLVKVADFGLSR-LMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKS 193
Query: 517 DVYAFGIVLLELLS-GKKP 534
DV+AFG++L E+ + G P
Sbjct: 194 DVWAFGVLLWEIATYGMSP 212
>pdb|1FPU|A Chain A, Crystal Structure Of Abl Kinase Domain In Complex With A
Small Molecule Inhibitor
pdb|1FPU|B Chain B, Crystal Structure Of Abl Kinase Domain In Complex With A
Small Molecule Inhibitor
pdb|1IEP|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Sti-571.
pdb|1IEP|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Sti-571.
pdb|1M52|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Pd173955
pdb|1M52|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Pd173955
pdb|1OPJ|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|1OPJ|B Chain B, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|2HZN|A Chain A, Abl Kinase Domain In Complex With Nvp-Afg210
pdb|3K5V|A Chain A, Structure Of Abl Kinase In Complex With Imatinib And Gnf-2
pdb|3K5V|B Chain B, Structure Of Abl Kinase In Complex With Imatinib And Gnf-2
pdb|3MS9|A Chain A, Abl Kinase In Complex With Imatinib And A Fragment (Frag1)
I Myristate Pocket
pdb|3MS9|B Chain B, Abl Kinase In Complex With Imatinib And A Fragment (Frag1)
I Myristate Pocket
pdb|3MSS|A Chain A, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|B Chain B, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|C Chain C, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|D Chain D, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
Length = 293
Score = 78.6 bits (192), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 52/192 (27%), Positives = 99/192 (51%), Gaps = 9/192 (4%)
Query: 339 VGKGGHSHVYRGCLPD-GKELAVKILKPSEDVLKEFASEIEIITALHHRNIISLFGFCFE 397
+G G + VY G +AVK LK ++EF E ++ + H N++ L G C
Sbjct: 26 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTR 85
Query: 398 DNNLLLVYDFLSRGSLEENLH-GNKKDGNAFGWTERYKVAVGVAEALDYLHNSCEQPVIH 456
+ ++ +F++ G+L + L N+++ +A +A ++ A++YL ++ IH
Sbjct: 86 EPPFYIITEFMTYGNLLDYLRECNRQEVSA---VVLLYMATQISSAMEYLE---KKNFIH 139
Query: 457 KDVKSSNILLSDDFEPQLSDFGLASWLSTSSSHLTCTDVAGTFGYLAPEYFMHGKVSEKI 516
+D+ + N L+ ++ +++DFGL+ L T ++ + APE + K S K
Sbjct: 140 RDLAARNCLVGENHLVKVADFGLSR-LMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKS 198
Query: 517 DVYAFGIVLLEL 528
DV+AFG++L E+
Sbjct: 199 DVWAFGVLLWEI 210
>pdb|3OCT|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase Mutant V555r
In Complex With Dasatinib
Length = 265
Score = 78.6 bits (192), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 62/261 (23%), Positives = 122/261 (46%), Gaps = 14/261 (5%)
Query: 332 NFLPEYLVGKGGHSHVYRGCLPDGKELAVKILKPSEDVLKEFASEIEIITALHHRNIISL 391
FL E +G G V G ++A+K++K EF E +++ L H ++ L
Sbjct: 12 TFLKE--LGTGQFGVVKYGKWRGQYDVAIKMIKEGSMSEDEFIEEAKVMMNLSHEKLVQL 69
Query: 392 FGFCFEDNNLLLVYDFLSRGSLEENLHGNKKDGNAFGWTERYKVAVGVAEALDYLHNSCE 451
+G C + + ++ ++++ G L L + + F + ++ V EA++YL +
Sbjct: 70 YGVCTKQRPIFIITEYMANGCLLNYLREMR---HRFQTQQLLEMCKDVCEAMEYLES--- 123
Query: 452 QPVIHKDVKSSNILLSDDFEPQLSDFGLASWLSTSSSHLTCTDVAGTFGYLAPEYFMHGK 511
+ +H+D+ + N L++D ++SDFGL+ ++ + + + PE M+ K
Sbjct: 124 KQFLHRDLAARNCLVNDQGVVKVSDFGLSRYV-LDDEYTSSRGSKFPVRWSPPEVLMYSK 182
Query: 512 VSEKIDVYAFGIVLLELLS-GKKPI----NSENPKGQESLVMWAKPILKDGKVSQLLDPS 566
S K D++AFG+++ E+ S GK P NSE + + +P L KV ++
Sbjct: 183 FSSKSDIWAFGVLMWEIYSLGKMPYERFTNSETAEHIAQGLRLYRPHLASEKVYTIMYSC 242
Query: 567 LDTDYDNDQIERMVLAATLSI 587
D +++L+ L +
Sbjct: 243 WHEKADERPTFKILLSNILDV 263
>pdb|2WQE|A Chain A, Structure Of S155r Aurora-A Somatic Mutant
Length = 262
Score = 78.6 bits (192), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 59/204 (28%), Positives = 97/204 (47%), Gaps = 16/204 (7%)
Query: 339 VGKGGHSHVYRGCLPDGKE-LAVKILKPSE----DVLKEFASEIEIITALHHRNIISLFG 393
+GKG +VY K LA+K+L ++ V + E+EI + L H NI+ L+G
Sbjct: 13 LGKGKFGNVYLAREKQRKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 72
Query: 394 FCFEDNNLLLVYDFLSRGSLEENLHGNKKDGNAFGWTERYKVAVGVAEALDYLHNSCEQP 453
+ + + L+ ++ G++ L K F +A AL Y H+ +
Sbjct: 73 YFHDATRVYLILEYAPLGTVYRELQKLSK----FDEQRTATYITELANALSYCHS---KR 125
Query: 454 VIHKDVKSSNILLSDDFEPQLSDFGLASWLSTSSSHLTCTDVAGTFGYLAPEYFMHGKVS 513
VIH+D+K N+LL E +++DFG + +S T + GT YL PE
Sbjct: 126 VIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRR----TTLCGTLDYLPPEMIEGRMHD 181
Query: 514 EKIDVYAFGIVLLELLSGKKPINS 537
EK+D+++ G++ E L GK P +
Sbjct: 182 EKVDLWSLGVLCYEFLVGKPPFEA 205
>pdb|2Z60|A Chain A, Crystal Structure Of The T315i Mutant Of Abl Kinase Bound
With Ppy-A
pdb|3IK3|A Chain A, Ap24534, A Pan-Bcr-Abl Inhibitor For Chronic Myeloid
Leukemi Potently Inhibits The T315i Mutant And Overcomes
Mutation-B Resistance
pdb|3IK3|B Chain B, Ap24534, A Pan-Bcr-Abl Inhibitor For Chronic Myeloid
Leukemi Potently Inhibits The T315i Mutant And Overcomes
Mutation-B Resistance
Length = 288
Score = 78.6 bits (192), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 52/192 (27%), Positives = 99/192 (51%), Gaps = 9/192 (4%)
Query: 339 VGKGGHSHVYRGCLPD-GKELAVKILKPSEDVLKEFASEIEIITALHHRNIISLFGFCFE 397
+G G + VY G +AVK LK ++EF E ++ + H N++ L G C
Sbjct: 21 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTR 80
Query: 398 DNNLLLVYDFLSRGSLEENLH-GNKKDGNAFGWTERYKVAVGVAEALDYLHNSCEQPVIH 456
+ ++ +F++ G+L + L N+++ +A +A ++ A++YL ++ IH
Sbjct: 81 EPPFYIIIEFMTYGNLLDYLRECNRQEVSA---VVLLYMATQISSAMEYLE---KKNFIH 134
Query: 457 KDVKSSNILLSDDFEPQLSDFGLASWLSTSSSHLTCTDVAGTFGYLAPEYFMHGKVSEKI 516
+D+ + N L+ ++ +++DFGL+ L T ++ + APE + K S K
Sbjct: 135 RDLAARNCLVGENHLVKVADFGLSR-LMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKS 193
Query: 517 DVYAFGIVLLEL 528
DV+AFG++L E+
Sbjct: 194 DVWAFGVLLWEI 205
>pdb|2PY3|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565g Mutation Responsible For
Pfeiffer Syndrome
pdb|2PY3|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565g Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 78.6 bits (192), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 48/188 (25%), Positives = 97/188 (51%), Gaps = 18/188 (9%)
Query: 358 LAVKILK--PSEDVLKEFASEIEIITAL-HHRNIISLFGFCFEDNNLLLVYDFLSRGSLE 414
+AVK+LK +E L + SE+E++ + H+NII+L G C +D L ++ + S+G+L
Sbjct: 70 VAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQDGPLYVIVGYASKGNLR 129
Query: 415 ENLHGNKKDGNAFGW------------TERYKVAVGVAEALDYLHNSCEQPVIHKDVKSS 462
E L + G + + + +A ++YL Q IH+D+ +
Sbjct: 130 EYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYL---ASQKCIHRDLAAR 186
Query: 463 NILLSDDFEPQLSDFGLASWLSTSSSHLTCTDVAGTFGYLAPEYFMHGKVSEKIDVYAFG 522
N+L++++ +++DFGLA ++ + T+ ++APE + + DV++FG
Sbjct: 187 NVLVTENNVMKIADFGLARDINNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFG 246
Query: 523 IVLLELLS 530
+++ E+ +
Sbjct: 247 VLMWEIFT 254
>pdb|3DK7|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK7|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 277
Score = 78.6 bits (192), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 55/205 (26%), Positives = 103/205 (50%), Gaps = 10/205 (4%)
Query: 339 VGKGGHSHVYRGCLPD-GKELAVKILKPSEDVLKEFASEIEIITALHHRNIISLFGFCFE 397
+G G + VY G +AVK LK ++EF E ++ + H N++ L G C
Sbjct: 19 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTR 78
Query: 398 DNNLLLVYDFLSRGSLEENLH-GNKKDGNAFGWTERYKVAVGVAEALDYLHNSCEQPVIH 456
+ ++ +F++ G+L + L N+++ +A +A ++ A++YL ++ IH
Sbjct: 79 EPPFYIIIEFMTYGNLLDYLRECNRQEVSA---VVLLYMATQISSAMEYLE---KKNFIH 132
Query: 457 KDVKSSNILLSDDFEPQLSDFGLASWLSTSSSHLTCTDVAGTFGYLAPEYFMHGKVSEKI 516
+D+ + N L+ ++ +++DFGL+ L T + + APE + K S K
Sbjct: 133 RDLAARNCLVGENHLVKVADFGLSR-LMTGDTXTAHAGAKFPIKWTAPESLAYNKFSIKS 191
Query: 517 DVYAFGIVLLELLS-GKKPINSENP 540
DV+AFG++L E+ + G P +P
Sbjct: 192 DVWAFGVLLWEIATYGMSPYPGIDP 216
>pdb|2FO0|A Chain A, Organization Of The Sh3-Sh2 Unit In Active And Inactive
Forms Of The C-Abl Tyrosine Kinase
Length = 495
Score = 78.6 bits (192), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 52/192 (27%), Positives = 99/192 (51%), Gaps = 9/192 (4%)
Query: 339 VGKGGHSHVYRGCLPD-GKELAVKILKPSEDVLKEFASEIEIITALHHRNIISLFGFCFE 397
+G G + VY G +AVK LK ++EF E ++ + H N++ L G C
Sbjct: 225 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTR 284
Query: 398 DNNLLLVYDFLSRGSLEENLHG-NKKDGNAFGWTERYKVAVGVAEALDYLHNSCEQPVIH 456
+ ++ +F++ G+L + L N+++ NA +A ++ A++YL ++ IH
Sbjct: 285 EPPFYIITEFMTYGNLLDYLRECNRQEVNA---VVLLYMATQISSAMEYLE---KKNFIH 338
Query: 457 KDVKSSNILLSDDFEPQLSDFGLASWLSTSSSHLTCTDVAGTFGYLAPEYFMHGKVSEKI 516
+++ + N L+ ++ +++DFGL+ L T ++ + APE + K S K
Sbjct: 339 RNLAARNCLVGENHLVKVADFGLSR-LMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKS 397
Query: 517 DVYAFGIVLLEL 528
DV+AFG++L E+
Sbjct: 398 DVWAFGVLLWEI 409
>pdb|2QOH|A Chain A, Crystal Structure Of Abl Kinase Bound With Ppy-a
pdb|2QOH|B Chain B, Crystal Structure Of Abl Kinase Bound With Ppy-a
pdb|3KF4|A Chain A, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KF4|B Chain B, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KFA|A Chain A, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KFA|B Chain B, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
Length = 288
Score = 78.6 bits (192), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 52/192 (27%), Positives = 99/192 (51%), Gaps = 9/192 (4%)
Query: 339 VGKGGHSHVYRGCLPD-GKELAVKILKPSEDVLKEFASEIEIITALHHRNIISLFGFCFE 397
+G G + VY G +AVK LK ++EF E ++ + H N++ L G C
Sbjct: 21 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTR 80
Query: 398 DNNLLLVYDFLSRGSLEENLH-GNKKDGNAFGWTERYKVAVGVAEALDYLHNSCEQPVIH 456
+ ++ +F++ G+L + L N+++ +A +A ++ A++YL ++ IH
Sbjct: 81 EPPFYIITEFMTYGNLLDYLRECNRQEVSA---VVLLYMATQISSAMEYLE---KKNFIH 134
Query: 457 KDVKSSNILLSDDFEPQLSDFGLASWLSTSSSHLTCTDVAGTFGYLAPEYFMHGKVSEKI 516
+D+ + N L+ ++ +++DFGL+ L T ++ + APE + K S K
Sbjct: 135 RDLAARNCLVGENHLVKVADFGLSR-LMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKS 193
Query: 517 DVYAFGIVLLEL 528
DV+AFG++L E+
Sbjct: 194 DVWAFGVLLWEI 205
>pdb|1OL6|A Chain A, Structure Of Unphosphorylated D274n Mutant Of Aurora-a
Length = 282
Score = 78.6 bits (192), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 58/204 (28%), Positives = 97/204 (47%), Gaps = 16/204 (7%)
Query: 339 VGKGGHSHVYRGCLPDGKE-LAVKILKPSE----DVLKEFASEIEIITALHHRNIISLFG 393
+GKG +VY K LA+K+L ++ V + E+EI + L H NI+ L+G
Sbjct: 18 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 77
Query: 394 FCFEDNNLLLVYDFLSRGSLEENLHGNKKDGNAFGWTERYKVAVGVAEALDYLHNSCEQP 453
+ + + L+ ++ G++ L K F +A AL Y H+ +
Sbjct: 78 YFHDATRVYLILEYAPLGTVYRELQKLSK----FDEQRTATYITELANALSYCHS---KR 130
Query: 454 VIHKDVKSSNILLSDDFEPQLSDFGLASWLSTSSSHLTCTDVAGTFGYLAPEYFMHGKVS 513
VIH+D+K N+LL E ++++FG + +S T + GT YL PE
Sbjct: 131 VIHRDIKPENLLLGSAGELKIANFGWSVHAPSSRR----TTLCGTLDYLPPEMIEGRMHD 186
Query: 514 EKIDVYAFGIVLLELLSGKKPINS 537
EK+D+++ G++ E L GK P +
Sbjct: 187 EKVDLWSLGVLCYEFLVGKPPFEA 210
>pdb|3OXZ|A Chain A, Crystal Structure Of Abl Kinase Domain Bound With A
Dfg-Out Inhibitor Ap24534
Length = 284
Score = 78.6 bits (192), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 54/199 (27%), Positives = 102/199 (51%), Gaps = 10/199 (5%)
Query: 339 VGKGGHSHVYRGCLPD-GKELAVKILKPSEDVLKEFASEIEIITALHHRNIISLFGFCFE 397
+G G + VY G +AVK LK ++EF E ++ + H N++ L G C
Sbjct: 21 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTR 80
Query: 398 DNNLLLVYDFLSRGSLEENLH-GNKKDGNAFGWTERYKVAVGVAEALDYLHNSCEQPVIH 456
+ ++ +F++ G+L + L N+++ +A +A ++ A++YL ++ IH
Sbjct: 81 EPPFYIITEFMTYGNLLDYLRECNRQEVSA---VVLLYMATQISSAMEYLE---KKNFIH 134
Query: 457 KDVKSSNILLSDDFEPQLSDFGLASWLSTSSSHLTCTDVAGTFGYLAPEYFMHGKVSEKI 516
+D+ + N L+ ++ +++DFGL+ L T ++ + APE + K S K
Sbjct: 135 RDLAARNCLVGENHLVKVADFGLSR-LMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKS 193
Query: 517 DVYAFGIVLLELLS-GKKP 534
DV+AFG++L E+ + G P
Sbjct: 194 DVWAFGVLLWEIATYGMSP 212
>pdb|2Q0B|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565a Mutation Responsible For
Pfeiffer Syndrome
pdb|2Q0B|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565a Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 78.6 bits (192), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 48/188 (25%), Positives = 97/188 (51%), Gaps = 18/188 (9%)
Query: 358 LAVKILK--PSEDVLKEFASEIEIITAL-HHRNIISLFGFCFEDNNLLLVYDFLSRGSLE 414
+AVK+LK +E L + SE+E++ + H+NII+L G C +D L ++ + S+G+L
Sbjct: 70 VAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQDGPLYVIVAYASKGNLR 129
Query: 415 ENLHGNKKDGNAFGW------------TERYKVAVGVAEALDYLHNSCEQPVIHKDVKSS 462
E L + G + + + +A ++YL Q IH+D+ +
Sbjct: 130 EYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYL---ASQKCIHRDLAAR 186
Query: 463 NILLSDDFEPQLSDFGLASWLSTSSSHLTCTDVAGTFGYLAPEYFMHGKVSEKIDVYAFG 522
N+L++++ +++DFGLA ++ + T+ ++APE + + DV++FG
Sbjct: 187 NVLVTENNVMKIADFGLARDINNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFG 246
Query: 523 IVLLELLS 530
+++ E+ +
Sbjct: 247 VLMWEIFT 254
>pdb|3DK3|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK3|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 293
Score = 78.6 bits (192), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 55/205 (26%), Positives = 103/205 (50%), Gaps = 10/205 (4%)
Query: 339 VGKGGHSHVYRGCLPD-GKELAVKILKPSEDVLKEFASEIEIITALHHRNIISLFGFCFE 397
+G G + VY G +AVK LK ++EF E ++ + H N++ L G C
Sbjct: 19 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTR 78
Query: 398 DNNLLLVYDFLSRGSLEENLH-GNKKDGNAFGWTERYKVAVGVAEALDYLHNSCEQPVIH 456
+ ++ +F++ G+L + L N+++ +A +A ++ A++YL ++ IH
Sbjct: 79 EPPFYIITEFMTYGNLLDYLRECNRQEVSA---VVLLYMATQISSAMEYLE---KKNFIH 132
Query: 457 KDVKSSNILLSDDFEPQLSDFGLASWLSTSSSHLTCTDVAGTFGYLAPEYFMHGKVSEKI 516
+D+ + N L+ ++ +++DFGL+ L T + + APE + K S K
Sbjct: 133 RDLAARNCLVGENHLVKVADFGLSR-LMTGDTFTAHAGAKFPIKWTAPESLAYNKFSIKS 191
Query: 517 DVYAFGIVLLELLS-GKKPINSENP 540
DV+AFG++L E+ + G P +P
Sbjct: 192 DVWAFGVLLWEIATYGMSPYPGIDP 216
>pdb|1OPL|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|1OPL|B Chain B, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
Length = 537
Score = 78.2 bits (191), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 52/192 (27%), Positives = 99/192 (51%), Gaps = 9/192 (4%)
Query: 339 VGKGGHSHVYRGCLPD-GKELAVKILKPSEDVLKEFASEIEIITALHHRNIISLFGFCFE 397
+G G + VY G +AVK LK ++EF E ++ + H N++ L G C
Sbjct: 267 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTR 326
Query: 398 DNNLLLVYDFLSRGSLEENLHG-NKKDGNAFGWTERYKVAVGVAEALDYLHNSCEQPVIH 456
+ ++ +F++ G+L + L N+++ NA +A ++ A++YL ++ IH
Sbjct: 327 EPPFYIITEFMTYGNLLDYLRECNRQEVNA---VVLLYMATQISSAMEYLE---KKNFIH 380
Query: 457 KDVKSSNILLSDDFEPQLSDFGLASWLSTSSSHLTCTDVAGTFGYLAPEYFMHGKVSEKI 516
+++ + N L+ ++ +++DFGL+ L T ++ + APE + K S K
Sbjct: 381 RNLAARNCLVGENHLVKVADFGLSR-LMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKS 439
Query: 517 DVYAFGIVLLEL 528
DV+AFG++L E+
Sbjct: 440 DVWAFGVLLWEI 451
>pdb|3UGC|A Chain A, Structural Basis Of Jak2 Inhibition By The Type Ii
Inhibtor Nvp-Bbt594
Length = 295
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 56/181 (30%), Positives = 93/181 (51%), Gaps = 12/181 (6%)
Query: 355 GKELAVKILKPS-EDVLKEFASEIEIITALHHRNIISLFGFCFE--DNNLLLVYDFLSRG 411
G+ +AVK L+ S E+ L++F EIEI+ +L H NI+ G C+ NL L+ ++L G
Sbjct: 39 GEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYG 98
Query: 412 SLEENLHGNKKDGNAFGWTERYKVAVGVAEALDYLHNSCEQPVIHKDVKSSNILLSDDFE 471
SL + L +K+ + + + + ++YL + IH+D+ + NIL+ ++
Sbjct: 99 SLRDYLQKHKERIDHIKLLQ---YTSQICKGMEYLGT---KRYIHRDLATRNILVENENR 152
Query: 472 PQLSDFGLASWLSTSSSHLTCTDVAGT--FGYLAPEYFMHGKVSEKIDVYAFGIVLLELL 529
++ DFGL L + + F Y APE K S DV++FG+VL EL
Sbjct: 153 VKIGDFGLTKVLPQDKEFFKVKEPGESPIFWY-APESLTESKFSVASDVWSFGVVLYELF 211
Query: 530 S 530
+
Sbjct: 212 T 212
>pdb|2XNE|A Chain A, Structure Of Aurora-A Bound To An Imidazopyrazine
Inhibitor
Length = 272
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 58/204 (28%), Positives = 97/204 (47%), Gaps = 16/204 (7%)
Query: 339 VGKGGHSHVYRGCLPDGKE-LAVKILKPSE----DVLKEFASEIEIITALHHRNIISLFG 393
+GKG +VY K LA+K+L ++ V + E+EI + L H NI+ L+G
Sbjct: 19 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 78
Query: 394 FCFEDNNLLLVYDFLSRGSLEENLHGNKKDGNAFGWTERYKVAVGVAEALDYLHNSCEQP 453
+ + + L+ ++ G++ L K F +A AL Y H+ +
Sbjct: 79 YFHDATRVYLILEYAPLGTVYRELQKLSK----FDEQRTATYITELANALSYCHS---KR 131
Query: 454 VIHKDVKSSNILLSDDFEPQLSDFGLASWLSTSSSHLTCTDVAGTFGYLAPEYFMHGKVS 513
VIH+D+K N+LL E ++++FG + +S T + GT YL PE
Sbjct: 132 VIHRDIKPENLLLGSAGELKIANFGWSVHAPSSRR----TTLCGTLDYLPPEMIEGRMHD 187
Query: 514 EKIDVYAFGIVLLELLSGKKPINS 537
EK+D+++ G++ E L GK P +
Sbjct: 188 EKVDLWSLGVLCYEFLVGKPPFEA 211
>pdb|2PVF|A Chain A, Crystal Structure Of Tyrosine Phosphorylated Activated Fgf
Receptor 2 (Fgfr2) Kinase Domain In Complex With Atp
Analog And Substrate Peptide
Length = 334
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 48/188 (25%), Positives = 96/188 (51%), Gaps = 18/188 (9%)
Query: 358 LAVKILK--PSEDVLKEFASEIEIITAL-HHRNIISLFGFCFEDNNLLLVYDFLSRGSLE 414
+AVK+LK +E L + SE+E++ + H+NII+L G C +D L ++ ++ S+G+L
Sbjct: 70 VAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLR 129
Query: 415 ENLHGNKKDG------------NAFGWTERYKVAVGVAEALDYLHNSCEQPVIHKDVKSS 462
E L + G + + +A ++YL Q IH+D+ +
Sbjct: 130 EYLRARRPPGMEXSYDINRVPEEQMTFKDLVSCTYQLARGMEYL---ASQKCIHRDLAAR 186
Query: 463 NILLSDDFEPQLSDFGLASWLSTSSSHLTCTDVAGTFGYLAPEYFMHGKVSEKIDVYAFG 522
N+L++++ +++DFGLA ++ T+ ++APE + + DV++FG
Sbjct: 187 NVLVTENNVMKIADFGLARDINNIDXXKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFG 246
Query: 523 IVLLELLS 530
+++ E+ +
Sbjct: 247 VLMWEIFT 254
>pdb|3TJC|A Chain A, Co-Crystal Structure Of Jak2 With Thienopyridine 8
pdb|3TJC|B Chain B, Co-Crystal Structure Of Jak2 With Thienopyridine 8
pdb|3TJD|A Chain A, Co-Crystal Structure Of Jak2 With Thienopyridine 19
pdb|3TJD|B Chain B, Co-Crystal Structure Of Jak2 With Thienopyridine 19
Length = 298
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 54/180 (30%), Positives = 92/180 (51%), Gaps = 10/180 (5%)
Query: 355 GKELAVKILKPS-EDVLKEFASEIEIITALHHRNIISLFGFCFE--DNNLLLVYDFLSRG 411
G+ +AVK L+ S E+ L++F EIEI+ +L H NI+ G C+ NL L+ ++L G
Sbjct: 42 GEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYG 101
Query: 412 SLEENLHGNKKDGNAFGWTERYKVAVGVAEALDYLHNSCEQPVIHKDVKSSNILLSDDFE 471
SL + L +K+ + + + + ++YL + IH+D+ + NIL+ ++
Sbjct: 102 SLRDYLQKHKE---RIDHIKLLQYTSQICKGMEYLGT---KRYIHRDLATRNILVENENR 155
Query: 472 PQLSDFGLASWLSTSSSHLTCTDVAGT-FGYLAPEYFMHGKVSEKIDVYAFGIVLLELLS 530
++ DFGL L + + + APE K S DV++FG+VL EL +
Sbjct: 156 VKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFT 215
>pdb|3RVG|A Chain A, Crystals Structure Of Jak2 With A
1-Amino-5h-Pyrido[4,3-B]indol-4- Carboxamide Inhibitor
Length = 303
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 54/180 (30%), Positives = 92/180 (51%), Gaps = 10/180 (5%)
Query: 355 GKELAVKILKPS-EDVLKEFASEIEIITALHHRNIISLFGFCFE--DNNLLLVYDFLSRG 411
G+ +AVK L+ S E+ L++F EIEI+ +L H NI+ G C+ NL L+ ++L G
Sbjct: 43 GEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYG 102
Query: 412 SLEENLHGNKKDGNAFGWTERYKVAVGVAEALDYLHNSCEQPVIHKDVKSSNILLSDDFE 471
SL + L +K+ + + + + ++YL + IH+D+ + NIL+ ++
Sbjct: 103 SLRDYLQKHKERIDHIKLLQ---YTSQICKGMEYLGT---KRYIHRDLATRNILVENENR 156
Query: 472 PQLSDFGLASWLSTSSSHLTCTDVAGT-FGYLAPEYFMHGKVSEKIDVYAFGIVLLELLS 530
++ DFGL L + + + APE K S DV++FG+VL EL +
Sbjct: 157 VKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFT 216
>pdb|2B7A|A Chain A, The Structural Basis Of Janus Kinase 2 Inhibition By A
Potent And Specific Pan-Janus Kinase Inhibitor
pdb|2B7A|B Chain B, The Structural Basis Of Janus Kinase 2 Inhibition By A
Potent And Specific Pan-Janus Kinase Inhibitor
pdb|3FUP|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
pdb|3FUP|B Chain B, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
Length = 293
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 54/180 (30%), Positives = 92/180 (51%), Gaps = 10/180 (5%)
Query: 355 GKELAVKILKPS-EDVLKEFASEIEIITALHHRNIISLFGFCFE--DNNLLLVYDFLSRG 411
G+ +AVK L+ S E+ L++F EIEI+ +L H NI+ G C+ NL L+ ++L G
Sbjct: 37 GEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYG 96
Query: 412 SLEENLHGNKKDGNAFGWTERYKVAVGVAEALDYLHNSCEQPVIHKDVKSSNILLSDDFE 471
SL + L +K+ + + + + ++YL + IH+D+ + NIL+ ++
Sbjct: 97 SLRDYLQKHKERIDHIKLLQ---YTSQICKGMEYLGT---KRYIHRDLATRNILVENENR 150
Query: 472 PQLSDFGLASWLSTSSSHLTCTDVAGT-FGYLAPEYFMHGKVSEKIDVYAFGIVLLELLS 530
++ DFGL L + + + APE K S DV++FG+VL EL +
Sbjct: 151 VKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFT 210
>pdb|3E62|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
pdb|3E63|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
pdb|3E64|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
Length = 293
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 54/180 (30%), Positives = 92/180 (51%), Gaps = 10/180 (5%)
Query: 355 GKELAVKILKPS-EDVLKEFASEIEIITALHHRNIISLFGFCFE--DNNLLLVYDFLSRG 411
G+ +AVK L+ S E+ L++F EIEI+ +L H NI+ G C+ NL L+ ++L G
Sbjct: 38 GEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYG 97
Query: 412 SLEENLHGNKKDGNAFGWTERYKVAVGVAEALDYLHNSCEQPVIHKDVKSSNILLSDDFE 471
SL + L +K+ + + + + ++YL + IH+D+ + NIL+ ++
Sbjct: 98 SLRDYLQKHKERIDHIKLLQ---YTSQICKGMEYLGT---KRYIHRDLATRNILVENENR 151
Query: 472 PQLSDFGLASWLSTSSSHLTCTDVAGT-FGYLAPEYFMHGKVSEKIDVYAFGIVLLELLS 530
++ DFGL L + + + APE K S DV++FG+VL EL +
Sbjct: 152 VKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFT 211
>pdb|4AQC|A Chain A, Triazolopyridine-Based Inhibitor Of Janus Kinase 2
pdb|4AQC|B Chain B, Triazolopyridine-Based Inhibitor Of Janus Kinase 2
Length = 301
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 54/180 (30%), Positives = 92/180 (51%), Gaps = 10/180 (5%)
Query: 355 GKELAVKILKPS-EDVLKEFASEIEIITALHHRNIISLFGFCFE--DNNLLLVYDFLSRG 411
G+ +AVK L+ S E+ L++F EIEI+ +L H NI+ G C+ NL L+ ++L G
Sbjct: 45 GEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYG 104
Query: 412 SLEENLHGNKKDGNAFGWTERYKVAVGVAEALDYLHNSCEQPVIHKDVKSSNILLSDDFE 471
SL + L +K+ + + + + ++YL + IH+D+ + NIL+ ++
Sbjct: 105 SLRDYLQKHKE---RIDHIKLLQYTSQICKGMEYLGT---KRYIHRDLATRNILVENENR 158
Query: 472 PQLSDFGLASWLSTSSSHLTCTDVAGT-FGYLAPEYFMHGKVSEKIDVYAFGIVLLELLS 530
++ DFGL L + + + APE K S DV++FG+VL EL +
Sbjct: 159 VKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFT 218
>pdb|3Q32|A Chain A, Structure Of Janus Kinase 2 With A Pyrrolotriazine
Inhibitor
pdb|3Q32|B Chain B, Structure Of Janus Kinase 2 With A Pyrrolotriazine
Inhibitor
Length = 301
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 56/181 (30%), Positives = 93/181 (51%), Gaps = 12/181 (6%)
Query: 355 GKELAVKILKPS-EDVLKEFASEIEIITALHHRNIISLFGFCFE--DNNLLLVYDFLSRG 411
G+ +AVK L+ S E+ L++F EIEI+ +L H NI+ G C+ NL L+ ++L G
Sbjct: 39 GEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYG 98
Query: 412 SLEENLHGNKKDGNAFGWTERYKVAVGVAEALDYLHNSCEQPVIHKDVKSSNILLSDDFE 471
SL + L +K+ + + + + ++YL + IH+D+ + NIL+ ++
Sbjct: 99 SLRDYLQKHKERIDHIKLLQ---YTSQICKGMEYLGT---KRYIHRDLATRNILVENENR 152
Query: 472 PQLSDFGLASWLSTSSSHLTCTDVAGT--FGYLAPEYFMHGKVSEKIDVYAFGIVLLELL 529
++ DFGL L + + F Y APE K S DV++FG+VL EL
Sbjct: 153 VKIGDFGLTKVLPQDKEXXKVKEPGESPIFWY-APESLTESKFSVASDVWSFGVVLYELF 211
Query: 530 S 530
+
Sbjct: 212 T 212
>pdb|4HGE|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 8
pdb|4HGE|B Chain B, Jak2 Kinase (Jh1 Domain) In Complex With Compound 8
Length = 300
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 54/180 (30%), Positives = 92/180 (51%), Gaps = 10/180 (5%)
Query: 355 GKELAVKILKPS-EDVLKEFASEIEIITALHHRNIISLFGFCFE--DNNLLLVYDFLSRG 411
G+ +AVK L+ S E+ L++F EIEI+ +L H NI+ G C+ NL L+ ++L G
Sbjct: 44 GEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYG 103
Query: 412 SLEENLHGNKKDGNAFGWTERYKVAVGVAEALDYLHNSCEQPVIHKDVKSSNILLSDDFE 471
SL + L +K+ + + + + ++YL + IH+D+ + NIL+ ++
Sbjct: 104 SLRDYLQKHKE---RIDHIKLLQYTSQICKGMEYLGT---KRYIHRDLATRNILVENENR 157
Query: 472 PQLSDFGLASWLSTSSSHLTCTDVAGT-FGYLAPEYFMHGKVSEKIDVYAFGIVLLELLS 530
++ DFGL L + + + APE K S DV++FG+VL EL +
Sbjct: 158 VKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFT 217
>pdb|3LPB|A Chain A, Crystal Structure Of Jak2 Complexed With A Potent
2,8-Diaryl Quinoxaline Inhibitor
pdb|3LPB|B Chain B, Crystal Structure Of Jak2 Complexed With A Potent
2,8-Diaryl Quinoxaline Inhibitor
pdb|3KRR|A Chain A, Crystal Structure Of Jak2 Complexed With A Potent
Quinoxaline Atp Site Inhibitor
Length = 295
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 54/180 (30%), Positives = 92/180 (51%), Gaps = 10/180 (5%)
Query: 355 GKELAVKILKPS-EDVLKEFASEIEIITALHHRNIISLFGFCFE--DNNLLLVYDFLSRG 411
G+ +AVK L+ S E+ L++F EIEI+ +L H NI+ G C+ NL L+ ++L G
Sbjct: 39 GEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYG 98
Query: 412 SLEENLHGNKKDGNAFGWTERYKVAVGVAEALDYLHNSCEQPVIHKDVKSSNILLSDDFE 471
SL + L +K+ + + + + ++YL + IH+D+ + NIL+ ++
Sbjct: 99 SLRDYLQKHKE---RIDHIKLLQYTSQICKGMEYLGT---KRYIHRDLATRNILVENENR 152
Query: 472 PQLSDFGLASWLSTSSSHLTCTDVAGT-FGYLAPEYFMHGKVSEKIDVYAFGIVLLELLS 530
++ DFGL L + + + APE K S DV++FG+VL EL +
Sbjct: 153 VKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFT 212
>pdb|4E4M|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|B Chain B, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|D Chain D, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|E Chain E, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4F08|A Chain A, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
pdb|4F08|B Chain B, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
pdb|4F09|A Chain A, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
Length = 302
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 54/180 (30%), Positives = 92/180 (51%), Gaps = 10/180 (5%)
Query: 355 GKELAVKILKPS-EDVLKEFASEIEIITALHHRNIISLFGFCFE--DNNLLLVYDFLSRG 411
G+ +AVK L+ S E+ L++F EIEI+ +L H NI+ G C+ NL L+ ++L G
Sbjct: 46 GEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYG 105
Query: 412 SLEENLHGNKKDGNAFGWTERYKVAVGVAEALDYLHNSCEQPVIHKDVKSSNILLSDDFE 471
SL + L +K+ + + + + ++YL + IH+D+ + NIL+ ++
Sbjct: 106 SLRDYLQKHKE---RIDHIKLLQYTSQICKGMEYLGT---KRYIHRDLATRNILVENENR 159
Query: 472 PQLSDFGLASWLSTSSSHLTCTDVAGT-FGYLAPEYFMHGKVSEKIDVYAFGIVLLELLS 530
++ DFGL L + + + APE K S DV++FG+VL EL +
Sbjct: 160 VKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFT 219
>pdb|3JY9|A Chain A, Janus Kinase 2 Inhibitors
Length = 311
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 54/180 (30%), Positives = 92/180 (51%), Gaps = 10/180 (5%)
Query: 355 GKELAVKILKPS-EDVLKEFASEIEIITALHHRNIISLFGFCFE--DNNLLLVYDFLSRG 411
G+ +AVK L+ S E+ L++F EIEI+ +L H NI+ G C+ NL L+ ++L G
Sbjct: 57 GEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYG 116
Query: 412 SLEENLHGNKKDGNAFGWTERYKVAVGVAEALDYLHNSCEQPVIHKDVKSSNILLSDDFE 471
SL + L +K+ + + + + ++YL + IH+D+ + NIL+ ++
Sbjct: 117 SLRDYLQKHKERIDHIKLLQ---YTSQICKGMEYLGT---KRYIHRDLATRNILVENENR 170
Query: 472 PQLSDFGLASWLSTSSSHLTCTDVAGT-FGYLAPEYFMHGKVSEKIDVYAFGIVLLELLS 530
++ DFGL L + + + APE K S DV++FG+VL EL +
Sbjct: 171 VKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFT 230
>pdb|2W1I|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1I|B Chain B, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 326
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 56/181 (30%), Positives = 93/181 (51%), Gaps = 12/181 (6%)
Query: 355 GKELAVKILKPS-EDVLKEFASEIEIITALHHRNIISLFGFCFE--DNNLLLVYDFLSRG 411
G+ +AVK L+ S E+ L++F EIEI+ +L H NI+ G C+ NL L+ ++L G
Sbjct: 70 GEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYG 129
Query: 412 SLEENLHGNKKDGNAFGWTERYKVAVGVAEALDYLHNSCEQPVIHKDVKSSNILLSDDFE 471
SL + L +K+ + + + + ++YL + IH+D+ + NIL+ ++
Sbjct: 130 SLRDYLQKHKE---RIDHIKLLQYTSQICKGMEYLGT---KRYIHRDLATRNILVENENR 183
Query: 472 PQLSDFGLASWLSTSSSHLTCTDVAGT--FGYLAPEYFMHGKVSEKIDVYAFGIVLLELL 529
++ DFGL L + + F Y APE K S DV++FG+VL EL
Sbjct: 184 VKIGDFGLTKVLPQDKEXXKVKEPGESPIFWY-APESLTESKFSVASDVWSFGVVLYELF 242
Query: 530 S 530
+
Sbjct: 243 T 243
>pdb|3IO7|A Chain A, 2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Selective
Inhibitors Of Jak2
pdb|3IOK|A Chain A, 2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Selective
Inhibitors Of Jak2
pdb|3KCK|A Chain A, A Novel Chemotype Of Kinase Inhibitors
Length = 313
Score = 77.0 bits (188), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 54/180 (30%), Positives = 92/180 (51%), Gaps = 10/180 (5%)
Query: 355 GKELAVKILKPS-EDVLKEFASEIEIITALHHRNIISLFGFCFE--DNNLLLVYDFLSRG 411
G+ +AVK L+ S E+ L++F EIEI+ +L H NI+ G C+ NL L+ ++L G
Sbjct: 57 GEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYG 116
Query: 412 SLEENLHGNKKDGNAFGWTERYKVAVGVAEALDYLHNSCEQPVIHKDVKSSNILLSDDFE 471
SL + L +K+ + + + + ++YL + IH+D+ + NIL+ ++
Sbjct: 117 SLRDYLQKHKE---RIDHIKLLQYTSQICKGMEYLGT---KRYIHRDLATRNILVENENR 170
Query: 472 PQLSDFGLASWLSTSSSHLTCTDVAGT-FGYLAPEYFMHGKVSEKIDVYAFGIVLLELLS 530
++ DFGL L + + + APE K S DV++FG+VL EL +
Sbjct: 171 VKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFT 230
>pdb|3F69|A Chain A, Crystal Structure Of The Mycobacterium Tuberculosis Pknb
Mutant Kinase Domain In Complex With Kt5720
pdb|3F69|B Chain B, Crystal Structure Of The Mycobacterium Tuberculosis Pknb
Mutant Kinase Domain In Complex With Kt5720
Length = 311
Score = 77.0 bits (188), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 61/215 (28%), Positives = 111/215 (51%), Gaps = 21/215 (9%)
Query: 338 LVGKGGHSHVYRGC-LPDGKELAVKILKPSEDVLKE------FASEIEIITALHHRNIIS 390
++G GG S V+ L D +++AVK+L+ D+ ++ F E + AL+H I++
Sbjct: 19 ILGFGGMSEVHLARDLRDHRDVAVKVLR--ADLARDPSFYLRFRREAQNAAALNHPAIVA 76
Query: 391 LFGFCFEDNNL----LLVYDFLSRGSLEENLHGNKKDGNAFGWTERYKVAVGVAEALDYL 446
++ + +V +++ +L + +H T + + V +A+A L
Sbjct: 77 VYDTGEAETPAGPLPYIVMEYVDGVTLRDIVHTEGP------MTPKRAIEV-IADACQAL 129
Query: 447 HNSCEQPVIHKDVKSSNILLSDDFEPQLSDFGLASWLSTSSSHLTCTD-VAGTFGYLAPE 505
+ S + +IH+DVK +NIL+S ++ DFG+A ++ S + + T V GT YL+PE
Sbjct: 130 NFSHQNGIIHRDVKPANILISATNAVKVVDFGIARAIADSGNSVXQTAAVIGTAQYLSPE 189
Query: 506 YFMHGKVSEKIDVYAFGIVLLELLSGKKPINSENP 540
V + DVY+ G VL E+L+G+ P ++P
Sbjct: 190 QARGDSVDARSDVYSLGCVLYEVLTGEPPFTGDSP 224
>pdb|3D14|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly,
Lys240->arg, Met302- >leu) In Complex With
1-{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)- Ethyl]-
Thiazol-2-Yl}-3-(3-Trifluoromethyl-Phenyl)-Urea
pdb|3DJ5|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 290.
pdb|3DJ6|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 823.
pdb|3DJ7|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 130.
pdb|3D15|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With
1-(3-Chloro-Phenyl)-3-
{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)-
Ethyl]-Thiazol-2- Yl}-Urea [sns-314]
pdb|3D2I|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With 1-{5-[2-(1-Methyl-1h-
Pyrazolo[4,
3-D]pyrimidin-7-Ylamino)-Ethyl]-Thiazol-2-Yl}-3-
(3-Trifluoromethyl-Phenyl)-Urea
pdb|3D2K|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With
[7-(2-{2-[3-(3-Chloro-
Phenyl)-Ureido]-Thiazol-5-Yl}-Ethylamino)-Pyrazolo[4,3-
D]pyrimidin-1-Yl]-Acetic Acid
Length = 272
Score = 77.0 bits (188), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 57/206 (27%), Positives = 98/206 (47%), Gaps = 16/206 (7%)
Query: 339 VGKGGHSHVYRGCLPDGKE-LAVKILKPSE----DVLKEFASEIEIITALHHRNIISLFG 393
+GKG +VY K LA+K+L ++ V + E+EI + L H NI+ L+G
Sbjct: 20 LGKGKFGNVYLARERQSKFILALKVLFKTQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 79
Query: 394 FCFEDNNLLLVYDFLSRGSLEENLHGNKKDGNAFGWTERYKVAVGVAEALDYLHNSCEQP 453
+ + + L+ ++ G++ L + + F +A AL Y H+ +
Sbjct: 80 YFHDATRVYLILEYAPLGTVYREL----QKLSRFDEQRTATYITELANALSYCHS---KR 132
Query: 454 VIHKDVKSSNILLSDDFEPQLSDFGLASWLSTSSSHLTCTDVAGTFGYLAPEYFMHGKVS 513
VIH+D+K N+LL + E +++DFG + +S T + GT YL PE
Sbjct: 133 VIHRDIKPENLLLGSNGELKIADFGWSVHAPSSRR----TTLCGTLDYLPPEMIEGRMHD 188
Query: 514 EKIDVYAFGIVLLELLSGKKPINSEN 539
EK+D+++ G++ E L G P +
Sbjct: 189 EKVDLWSLGVLCYEFLVGMPPFEAHT 214
>pdb|3DAJ|A Chain A, Crystal Structure Of Aurora A Complexed With An Inhibitor
Discovered Through Site-Directed Dynamic Tethering
Length = 272
Score = 77.0 bits (188), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 57/206 (27%), Positives = 96/206 (46%), Gaps = 16/206 (7%)
Query: 339 VGKGGHSHVYRGCLPDGKE-LAVKILKPSE----DVLKEFASEIEIITALHHRNIISLFG 393
+GKG +VY K LA+K+L ++ V + E+EI + L H NI+ L+G
Sbjct: 20 LGKGKFGNVYLARERQSKFILALKVLFKTQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 79
Query: 394 FCFEDNNLLLVYDFLSRGSLEENLHGNKKDGNAFGWTERYKVAVGVAEALDYLHNSCEQP 453
+ + + L+ ++ G++ L + F +A AL Y H+ +
Sbjct: 80 YFHDATRVYLILEYAPLGTVYRELQKLSR----FDEQRTATYITELANALSYCHS---KR 132
Query: 454 VIHKDVKSSNILLSDDFEPQLSDFGLASWLSTSSSHLTCTDVAGTFGYLAPEYFMHGKVS 513
VIH+D+K N+LL + E +++DFG + +S C GT YL PE
Sbjct: 133 VIHRDIKPENLLLGSNGELKIADFGWSVHAPSSRRDTLC----GTLDYLPPEMIEGRMHD 188
Query: 514 EKIDVYAFGIVLLELLSGKKPINSEN 539
EK+D+++ G++ E L G P +
Sbjct: 189 EKVDLWSLGVLCYEFLVGMPPFEAHT 214
>pdb|4BBE|A Chain A, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|B Chain B, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|C Chain C, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|D Chain D, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|A Chain A, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|B Chain B, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|C Chain C, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|D Chain D, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
Length = 298
Score = 77.0 bits (188), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 53/180 (29%), Positives = 93/180 (51%), Gaps = 10/180 (5%)
Query: 355 GKELAVKILKPS-EDVLKEFASEIEIITALHHRNIISLFGFCFE--DNNLLLVYDFLSRG 411
G+ +AVK L+ S E+ L++F EIEI+ +L H NI+ G C+ NL L+ ++L G
Sbjct: 40 GEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYG 99
Query: 412 SLEENLHGNKKDGNAFGWTERYKVAVGVAEALDYLHNSCEQPVIHKDVKSSNILLSDDFE 471
SL + L +K+ + + + + ++YL + IH+++ + NIL+ ++
Sbjct: 100 SLRDYLQKHKERIDHIKLLQ---YTSQICKGMEYLGT---KRYIHRNLATRNILVENENR 153
Query: 472 PQLSDFGLASWLSTSSSHLTCTDVAGT-FGYLAPEYFMHGKVSEKIDVYAFGIVLLELLS 530
++ DFGL L + + + + APE K S DV++FG+VL EL +
Sbjct: 154 VKIGDFGLTKVLPQDKEYYKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFT 213
>pdb|3DK6|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK6|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 293
Score = 77.0 bits (188), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 55/205 (26%), Positives = 102/205 (49%), Gaps = 10/205 (4%)
Query: 339 VGKGGHSHVYRGCLPD-GKELAVKILKPSEDVLKEFASEIEIITALHHRNIISLFGFCFE 397
+G G VY G +AVK LK ++EF E ++ + H N++ L G C
Sbjct: 19 LGGGQFGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTR 78
Query: 398 DNNLLLVYDFLSRGSLEENLH-GNKKDGNAFGWTERYKVAVGVAEALDYLHNSCEQPVIH 456
+ ++ +F++ G+L + L N+++ +A +A ++ A++YL ++ IH
Sbjct: 79 EPPFYIITEFMTYGNLLDYLRECNRQEVSA---VVLLYMATQISSAMEYLE---KKNFIH 132
Query: 457 KDVKSSNILLSDDFEPQLSDFGLASWLSTSSSHLTCTDVAGTFGYLAPEYFMHGKVSEKI 516
+D+ + N L+ ++ +++DFGL+ L T + + APE + K S K
Sbjct: 133 RDLAARNCLVGENHLVKVADFGLSR-LMTGDTXTAHAGAKFPIKWTAPESLAYNKFSIKS 191
Query: 517 DVYAFGIVLLELLS-GKKPINSENP 540
DV+AFG++L E+ + G P +P
Sbjct: 192 DVWAFGVLLWEIATYGMSPYPGIDP 216
>pdb|3A7F|A Chain A, Human Mst3 Kinase
pdb|3A7G|A Chain A, Human Mst3 Kinase
pdb|3A7G|B Chain B, Human Mst3 Kinase
pdb|3A7H|A Chain A, Human Mst3 Kinase In Complex With Atp
pdb|3A7H|B Chain B, Human Mst3 Kinase In Complex With Atp
pdb|3A7I|A Chain A, Human Mst3 Kinase In Complex With Adenine
pdb|3A7J|A Chain A, Human Mst3 Kinase In Complex With Mnadp
Length = 303
Score = 77.0 bits (188), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 70/269 (26%), Positives = 130/269 (48%), Gaps = 33/269 (12%)
Query: 339 VGKGGHSHVYRGCLPDG---KELAVKI--LKPSEDVLKEFASEIEIITALHHRNIISLFG 393
+GKG V++G D K +A+KI L+ +ED +++ EI +++ + +G
Sbjct: 30 IGKGSFGEVFKGI--DNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVTKYYG 87
Query: 394 FCFEDNNLLLVYDFLSRGSLEENLHGNKKDGNAFGWTERYKVAVGVAEALDYLHNSCEQP 453
+D L ++ ++L GS + L D T+ + + + LDYLH+ +
Sbjct: 88 SYLKDTKLWIIMEYLGGGSALDLLEPGPLDE-----TQIATILREILKGLDYLHSEKK-- 140
Query: 454 VIHKDVKSSNILLSDDFEPQLSDFGLASWLSTSSSHLTCTDVAGTFGYLAPEYFMHGKVS 513
IH+D+K++N+LLS+ E +L+DFG+A L + + + GT ++APE
Sbjct: 141 -IHRDIKAANVLLSEHGEVKLADFGVAGQL--TDTQIKRNXFVGTPFWMAPEVIKQSAYD 197
Query: 514 EKIDVYAFGIVLLELLSGKKPINSENPKGQESLVMWAKPILKDGKVSQLLDPSLDTDYDN 573
K D+++ GI +EL G+ P + +P L+ P P+L+ +Y +
Sbjct: 198 SKADIWSLGITAIELARGEPPHSELHPMKVLFLIPKNNP------------PTLEGNY-S 244
Query: 574 DQIERMVLAATLSISRAPTVRPQINLVLK 602
++ V A +++ P+ RP +LK
Sbjct: 245 KPLKEFVEAC---LNKEPSFRPTAKELLK 270
>pdb|3COM|A Chain A, Crystal Structure Of Mst1 Kinase
pdb|3COM|B Chain B, Crystal Structure Of Mst1 Kinase
Length = 314
Score = 76.6 bits (187), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 54/203 (26%), Positives = 101/203 (49%), Gaps = 10/203 (4%)
Query: 339 VGKGGHSHVYRGCLPD-GKELAVKILKPSEDVLKEFASEIEIITALHHRNIISLFGFCFE 397
+G+G + VY+ + G+ +A+K + P E L+E EI I+ +++ +G F+
Sbjct: 37 LGEGSYGSVYKAIHKETGQIVAIKQV-PVESDLQEIIKEISIMQQCDSPHVVKYYGSYFK 95
Query: 398 DNNLLLVYDFLSRGSLEENLHGNKKDGNAFGWTERYKVAVGVAEALDYLHNSCEQPVIHK 457
+ +L +V ++ GS+ + + K E + + L+YLH + IH+
Sbjct: 96 NTDLWIVMEYCGAGSVSDIIRLRNK---TLTEDEIATILQSTLKGLEYLHFMRK---IHR 149
Query: 458 DVKSSNILLSDDFEPQLSDFGLASWLSTSSSHLTCTDVAGTFGYLAPEYFMHGKVSEKID 517
D+K+ NILL+ + +L+DFG+A L+ + V GT ++APE + D
Sbjct: 150 DIKAGNILLNTEGHAKLADFGVAGQLTDXMAKR--NXVIGTPFWMAPEVIQEIGYNCVAD 207
Query: 518 VYAFGIVLLELLSGKKPINSENP 540
+++ GI +E+ GK P +P
Sbjct: 208 IWSLGITAIEMAEGKPPYADIHP 230
>pdb|3CKW|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3,
Stk24)
Length = 304
Score = 76.6 bits (187), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 70/269 (26%), Positives = 130/269 (48%), Gaps = 33/269 (12%)
Query: 339 VGKGGHSHVYRGCLPDG---KELAVKI--LKPSEDVLKEFASEIEIITALHHRNIISLFG 393
+GKG V++G D K +A+KI L+ +ED +++ EI +++ + +G
Sbjct: 15 IGKGSFGEVFKGI--DNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVTKYYG 72
Query: 394 FCFEDNNLLLVYDFLSRGSLEENLHGNKKDGNAFGWTERYKVAVGVAEALDYLHNSCEQP 453
+D L ++ ++L GS + L D T+ + + + LDYLH+ +
Sbjct: 73 SYLKDTKLWIIMEYLGGGSALDLLEPGPLDE-----TQIATILREILKGLDYLHSEKK-- 125
Query: 454 VIHKDVKSSNILLSDDFEPQLSDFGLASWLSTSSSHLTCTDVAGTFGYLAPEYFMHGKVS 513
IH+D+K++N+LLS+ E +L+DFG+A L + + + GT ++APE
Sbjct: 126 -IHRDIKAANVLLSEHGEVKLADFGVAGQL--TDTQIKRNTFVGTPFWMAPEVIKQSAYD 182
Query: 514 EKIDVYAFGIVLLELLSGKKPINSENPKGQESLVMWAKPILKDGKVSQLLDPSLDTDYDN 573
K D+++ GI +EL G+ P + +P L+ P P+L+ +Y +
Sbjct: 183 SKADIWSLGITAIELARGEPPHSELHPMKVLFLIPKNNP------------PTLEGNY-S 229
Query: 574 DQIERMVLAATLSISRAPTVRPQINLVLK 602
++ V A +++ P+ RP +LK
Sbjct: 230 KPLKEFVEAC---LNKEPSFRPTAKELLK 255
>pdb|3I7C|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor Na-Pp2
pdb|3NYV|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Non-Specific Inhibitor
Whi-P180
Length = 484
Score = 76.6 bits (187), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 57/192 (29%), Positives = 92/192 (47%), Gaps = 18/192 (9%)
Query: 355 GKELAVKILKPSEDVLK----EFASEIEIITALHHRNIISLFGFCFEDNNLLLVYDFLSR 410
G+E AVK++ + K E++++ L H NI L+ F + LV + +
Sbjct: 51 GQECAVKVISKRQVKQKTDKESLLREVQLLKQLDHPNIXKLYEFFEDKGYFYLVGEVYTG 110
Query: 411 GSLEENLHGNKKDGNAFGWTERYKVAVGVAEALDYLHNSCEQPVIHKDVKSSNILL---S 467
G L + + K+ F + ++ V + Y H + ++H+D+K N+LL S
Sbjct: 111 GELFDEIISRKR----FSEVDAARIIRQVLSGITYXHKN---KIVHRDLKPENLLLESKS 163
Query: 468 DDFEPQLSDFGLASWLSTSSSHLTCTDVAGTFGYLAPEYFMHGKVSEKIDVYAFGIVLLE 527
D ++ DFGL++ S D GT Y+APE +HG EK DV++ G++L
Sbjct: 164 KDANIRIIDFGLSTHFEASKK---XKDKIGTAYYIAPE-VLHGTYDEKCDVWSTGVILYI 219
Query: 528 LLSGKKPINSEN 539
LLSG P N N
Sbjct: 220 LLSGCPPFNGAN 231
>pdb|1OPK|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
Length = 495
Score = 76.3 bits (186), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 51/192 (26%), Positives = 99/192 (51%), Gaps = 9/192 (4%)
Query: 339 VGKGGHSHVYRGCLPD-GKELAVKILKPSEDVLKEFASEIEIITALHHRNIISLFGFCFE 397
+G G + VY G +AVK LK ++EF E ++ + H N++ L G C
Sbjct: 228 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTR 287
Query: 398 DNNLLLVYDFLSRGSLEENLHG-NKKDGNAFGWTERYKVAVGVAEALDYLHNSCEQPVIH 456
+ ++ +F++ G+L + L N+++ +A +A ++ A++YL ++ IH
Sbjct: 288 EPPFYIITEFMTYGNLLDYLRECNRQEVSA---VVLLYMATQISSAMEYLE---KKNFIH 341
Query: 457 KDVKSSNILLSDDFEPQLSDFGLASWLSTSSSHLTCTDVAGTFGYLAPEYFMHGKVSEKI 516
+++ + N L+ ++ +++DFGL+ L T ++ + APE + K S K
Sbjct: 342 RNLAARNCLVGENHLVKVADFGLSR-LMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKS 400
Query: 517 DVYAFGIVLLEL 528
DV+AFG++L E+
Sbjct: 401 DVWAFGVLLWEI 412
>pdb|3CKX|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3,
Stk24) In Complex With Staurosporine
Length = 304
Score = 76.3 bits (186), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 70/269 (26%), Positives = 130/269 (48%), Gaps = 33/269 (12%)
Query: 339 VGKGGHSHVYRGCLPDG---KELAVKI--LKPSEDVLKEFASEIEIITALHHRNIISLFG 393
+GKG V++G D K +A+KI L+ +ED +++ EI +++ + +G
Sbjct: 15 IGKGSFGEVFKGI--DNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVTKYYG 72
Query: 394 FCFEDNNLLLVYDFLSRGSLEENLHGNKKDGNAFGWTERYKVAVGVAEALDYLHNSCEQP 453
+D L ++ ++L GS + L D T+ + + + LDYLH+ +
Sbjct: 73 SYLKDTKLWIIMEYLGGGSALDLLEPGPLDE-----TQIATILREILKGLDYLHSEKK-- 125
Query: 454 VIHKDVKSSNILLSDDFEPQLSDFGLASWLSTSSSHLTCTDVAGTFGYLAPEYFMHGKVS 513
IH+D+K++N+LLS+ E +L+DFG+A L + + + GT ++APE
Sbjct: 126 -IHRDIKAANVLLSEHGEVKLADFGVAGQL--TDTQIKRNXFVGTPFWMAPEVIKQSAYD 182
Query: 514 EKIDVYAFGIVLLELLSGKKPINSENPKGQESLVMWAKPILKDGKVSQLLDPSLDTDYDN 573
K D+++ GI +EL G+ P + +P L+ P P+L+ +Y +
Sbjct: 183 SKADIWSLGITAIELARGEPPHSELHPMKVLFLIPKNNP------------PTLEGNY-S 229
Query: 574 DQIERMVLAATLSISRAPTVRPQINLVLK 602
++ V A +++ P+ RP +LK
Sbjct: 230 KPLKEFVEAC---LNKEPSFRPTAKELLK 255
>pdb|3DZQ|A Chain A, Human Epha3 Kinase Domain In Complex With Inhibitor
Awl-Ii- 38.3
pdb|4G2F|A Chain A, Human Epha3 Kinase Domain In Complex With Compound 7
pdb|4GK2|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 66
pdb|4GK3|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 87
pdb|4GK4|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 90
Length = 361
Score = 76.3 bits (186), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 68/234 (29%), Positives = 114/234 (48%), Gaps = 16/234 (6%)
Query: 309 GLQERYSSTCRLFSYQELLSATSNFLPEYLVGKGGHSHVYRG--CLPDGKEL--AVKILK 364
GL R ST + + + L AT N + +VG G V G LP KE+ A+K LK
Sbjct: 13 GLVPR-GSTQTVHEFAKELDAT-NISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLK 70
Query: 365 P--SEDVLKEFASEIEIITALHHRNIISLFGFCFEDNNLLLVYDFLSRGSLEENLHGNKK 422
+E ++F E I+ H NII L G + +++V +++ GSL+ L +K
Sbjct: 71 VGYTEKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFL---RK 127
Query: 423 DGNAFGWTERYKVAVGVAEALDYLHNSCEQPVIHKDVKSSNILLSDDFEPQLSDFGLASW 482
F + + G+A + YL + +H+D+ + NIL++ + ++SDFGL+
Sbjct: 128 HDAQFTVIQLVGMLRGIASGMKYLS---DMGYVHRDLAARNILINSNLVCKVSDFGLSRV 184
Query: 483 LSTSSSHLTCTDVAGT-FGYLAPEYFMHGKVSEKIDVYAFGIVLLELLS-GKKP 534
L T + +PE + K + DV+++GIVL E++S G++P
Sbjct: 185 LEDDPEAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERP 238
>pdb|3ZHP|C Chain C, Human Mst3 (stk24) In Complex With Mo25beta
pdb|3ZHP|D Chain D, Human Mst3 (stk24) In Complex With Mo25beta
Length = 294
Score = 76.3 bits (186), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 70/269 (26%), Positives = 130/269 (48%), Gaps = 33/269 (12%)
Query: 339 VGKGGHSHVYRGCLPDG---KELAVKI--LKPSEDVLKEFASEIEIITALHHRNIISLFG 393
+GKG V++G D K +A+KI L+ +ED +++ EI +++ + +G
Sbjct: 35 IGKGSFGEVFKGI--DNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVTKYYG 92
Query: 394 FCFEDNNLLLVYDFLSRGSLEENLHGNKKDGNAFGWTERYKVAVGVAEALDYLHNSCEQP 453
+D L ++ ++L GS + L D T+ + + + LDYLH+ +
Sbjct: 93 SYLKDTKLWIIMEYLGGGSALDLLEPGPLDE-----TQIATILREILKGLDYLHSEKK-- 145
Query: 454 VIHKDVKSSNILLSDDFEPQLSDFGLASWLSTSSSHLTCTDVAGTFGYLAPEYFMHGKVS 513
IH+D+K++N+LLS+ E +L+DFG+A L + + + GT ++APE
Sbjct: 146 -IHRDIKAANVLLSEHGEVKLADFGVAGQL--TDTQIKRNTFVGTPFWMAPEVIKQSAYD 202
Query: 514 EKIDVYAFGIVLLELLSGKKPINSENPKGQESLVMWAKPILKDGKVSQLLDPSLDTDYDN 573
K D+++ GI +EL G+ P + +P L+ P P+L+ +Y +
Sbjct: 203 SKADIWSLGITAIELARGEPPHSELHPMKVLFLIPKNNP------------PTLEGNY-S 249
Query: 574 DQIERMVLAATLSISRAPTVRPQINLVLK 602
++ V A +++ P+ RP +LK
Sbjct: 250 KPLKEFVEAC---LNKEPSFRPTAKELLK 275
>pdb|2XA4|A Chain A, Inhibitors Of Jak2 Kinase Domain
pdb|2XA4|B Chain B, Inhibitors Of Jak2 Kinase Domain
Length = 298
Score = 75.9 bits (185), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 53/180 (29%), Positives = 90/180 (50%), Gaps = 10/180 (5%)
Query: 355 GKELAVKILKPS-EDVLKEFASEIEIITALHHRNIISLFGFCFE--DNNLLLVYDFLSRG 411
G+ +AVK L+ S E+ L++F EIEI+ +L H NI+ G C+ NL L+ ++L G
Sbjct: 42 GEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYG 101
Query: 412 SLEENLHGNKKDGNAFGWTERYKVAVGVAEALDYLHNSCEQPVIHKDVKSSNILLSDDFE 471
SL + L + + + + + ++YL + IH+D+ + NIL+ ++
Sbjct: 102 SLRDYLQAH---AERIDHIKLLQYTSQICKGMEYLGT---KRYIHRDLATRNILVENENR 155
Query: 472 PQLSDFGLASWLSTSSSHLTCTDVAGT-FGYLAPEYFMHGKVSEKIDVYAFGIVLLELLS 530
++ DFGL L + + + APE K S DV++FG+VL EL +
Sbjct: 156 VKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFT 215
>pdb|3T8O|A Chain A, Rhodopsin Kinase (grk1) L166k Mutant At 2.5a Resolution
Length = 543
Score = 75.9 bits (185), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 46/167 (27%), Positives = 84/167 (50%), Gaps = 7/167 (4%)
Query: 376 EIEIITALHHRNIISLFGFCFE-DNNLLLVYDFLSRGSLEENLHGNKKDGNAFGWTERYK 434
E +I+ +H R I+SL + FE +L LV ++ G + +++ +D F
Sbjct: 235 EKKILAKVHSRFIVSL-AYAFETKTDLCLVMTIMNGGDIRYHIYNVDEDNPGFQEPRAIF 293
Query: 435 VAVGVAEALDYLHNSCEQPVIHKDVKSSNILLSDDFEPQLSDFGLASWLSTSSSHLTCTD 494
+ L++LH ++ +I++D+K N+LL DD ++SD GLA L +
Sbjct: 294 YTAQIVSGLEHLH---QRNIIYRDLKPENVLLDDDGNVRISDLGLAVELKAGQTK--TKG 348
Query: 495 VAGTFGYLAPEYFMHGKVSEKIDVYAFGIVLLELLSGKKPINSENPK 541
AGT G++APE + + +D +A G+ L E+++ + P + K
Sbjct: 349 YAGTPGFMAPELLLGEEYDFSVDYFALGVTLYEMIAARGPFRARGEK 395
>pdb|2QOC|A Chain A, Human Epha3 Kinase Domain, Phosphorylated, Amp-Pnp Bound
Structure
Length = 344
Score = 75.9 bits (185), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 65/227 (28%), Positives = 111/227 (48%), Gaps = 15/227 (6%)
Query: 316 STCRLFSYQELLSATSNFLPEYLVGKGGHSHVYRG--CLPDGKEL--AVKILKP--SEDV 369
ST + + + L AT N + +VG G V G LP KE+ A+K LK +E
Sbjct: 2 STQTVHEFAKELDAT-NISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQ 60
Query: 370 LKEFASEIEIITALHHRNIISLFGFCFEDNNLLLVYDFLSRGSLEENLHGNKKDGNAFGW 429
++F E I+ H NII L G + +++V +++ GSL+ L +K F
Sbjct: 61 RRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFL---RKHDAQFTV 117
Query: 430 TERYKVAVGVAEALDYLHNSCEQPVIHKDVKSSNILLSDDFEPQLSDFGLASWLSTSSSH 489
+ + G+A + YL + +H+D+ + NIL++ + ++SDFGL+ L
Sbjct: 118 IQLVGMLRGIASGMKYLS---DMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEA 174
Query: 490 LTCTDVAGT-FGYLAPEYFMHGKVSEKIDVYAFGIVLLELLS-GKKP 534
T + +PE + K + DV+++GIVL E++S G++P
Sbjct: 175 AYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERP 221
>pdb|3C4X|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.9a
pdb|3C4X|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.9a
pdb|3C4Y|A Chain A, Crystal Structure Of Apo Form Of G Protein Coupled
Receptor Kinase 1 At 7.51a
pdb|3C4Y|B Chain B, Crystal Structure Of Apo Form Of G Protein Coupled
Receptor Kinase 1 At 7.51a
pdb|3C4Z|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 1.84a
pdb|3C50|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 2.6a
pdb|3C50|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 2.6a
pdb|3C51|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 3.55a
pdb|3C51|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 3.55a
Length = 543
Score = 75.9 bits (185), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 46/167 (27%), Positives = 84/167 (50%), Gaps = 7/167 (4%)
Query: 376 EIEIITALHHRNIISLFGFCFE-DNNLLLVYDFLSRGSLEENLHGNKKDGNAFGWTERYK 434
E +I+ +H R I+SL + FE +L LV ++ G + +++ +D F
Sbjct: 235 EKKILAKVHSRFIVSL-AYAFETKTDLCLVMTIMNGGDIRYHIYNVDEDNPGFQEPRAIF 293
Query: 435 VAVGVAEALDYLHNSCEQPVIHKDVKSSNILLSDDFEPQLSDFGLASWLSTSSSHLTCTD 494
+ L++LH ++ +I++D+K N+LL DD ++SD GLA L +
Sbjct: 294 YTAQIVSGLEHLH---QRNIIYRDLKPENVLLDDDGNVRISDLGLAVELKAGQTK--TKG 348
Query: 495 VAGTFGYLAPEYFMHGKVSEKIDVYAFGIVLLELLSGKKPINSENPK 541
AGT G++APE + + +D +A G+ L E+++ + P + K
Sbjct: 349 YAGTPGFMAPELLLGEEYDFSVDYFALGVTLYEMIAARGPFRARGEK 395
>pdb|3QC9|A Chain A, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|B Chain B, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|C Chain C, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|D Chain D, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
Length = 543
Score = 75.9 bits (185), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 46/167 (27%), Positives = 84/167 (50%), Gaps = 7/167 (4%)
Query: 376 EIEIITALHHRNIISLFGFCFE-DNNLLLVYDFLSRGSLEENLHGNKKDGNAFGWTERYK 434
E +I+ +H R I+SL + FE +L LV ++ G + +++ +D F
Sbjct: 235 EKKILAKVHSRFIVSL-AYAFETKTDLCLVMTIMNGGDIRYHIYNVDEDNPGFQEPRAIF 293
Query: 435 VAVGVAEALDYLHNSCEQPVIHKDVKSSNILLSDDFEPQLSDFGLASWLSTSSSHLTCTD 494
+ L++LH ++ +I++D+K N+LL DD ++SD GLA L +
Sbjct: 294 YTAQIVSGLEHLH---QRNIIYRDLKPENVLLDDDGNVRISDLGLAVELKAGQTK--TKG 348
Query: 495 VAGTFGYLAPEYFMHGKVSEKIDVYAFGIVLLELLSGKKPINSENPK 541
AGT G++APE + + +D +A G+ L E+++ + P + K
Sbjct: 349 YAGTPGFMAPELLLGEEYDFSVDYFALGVTLYEMIAARGPFRARGEK 395
>pdb|3C4W|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.7a
pdb|3C4W|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.7a
Length = 543
Score = 75.9 bits (185), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 46/167 (27%), Positives = 84/167 (50%), Gaps = 7/167 (4%)
Query: 376 EIEIITALHHRNIISLFGFCFE-DNNLLLVYDFLSRGSLEENLHGNKKDGNAFGWTERYK 434
E +I+ +H R I+SL + FE +L LV ++ G + +++ +D F
Sbjct: 235 EKKILAKVHSRFIVSL-AYAFETKTDLCLVMTIMNGGDIRYHIYNVDEDNPGFQEPRAIF 293
Query: 435 VAVGVAEALDYLHNSCEQPVIHKDVKSSNILLSDDFEPQLSDFGLASWLSTSSSHLTCTD 494
+ L++LH ++ +I++D+K N+LL DD ++SD GLA L +
Sbjct: 294 YTAQIVSGLEHLH---QRNIIYRDLKPENVLLDDDGNVRISDLGLAVELKAGQTK--TKG 348
Query: 495 VAGTFGYLAPEYFMHGKVSEKIDVYAFGIVLLELLSGKKPINSENPK 541
AGT G++APE + + +D +A G+ L E+++ + P + K
Sbjct: 349 YAGTPGFMAPELLLGEEYDFSVDYFALGVTLYEMIAARGPFRARGEK 395
>pdb|3SXR|A Chain A, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complex With Dasatinib
pdb|3SXR|B Chain B, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complex With Dasatinib
pdb|3SXS|A Chain A, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complexed With Pp2
Length = 268
Score = 75.9 bits (185), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 59/233 (25%), Positives = 109/233 (46%), Gaps = 17/233 (7%)
Query: 339 VGKGGHSHVYRGCLPDGKELAVKILKPSEDVLKEFASEIEIITALHHRNIISLFGFCFED 398
+G G V G ++AVK++K EF E + + L H ++ +G C ++
Sbjct: 16 LGSGQFGVVKLGKWKGQYDVAVKMIKEGSMSEDEFFQEAQTMMKLSHPKLVKFYGVCSKE 75
Query: 399 NNLLLVYDFLSRGSLEENLHGNKKDGNAFGWTERYKVAVGVAEALDYLHNSCEQPVIHKD 458
+ +V +++S G L L + G ++ ++ V E + +L + IH+D
Sbjct: 76 YPIYIVTEYISNGCLLNYL---RSHGKGLEPSQLLEMCYDVCEGMAFLES---HQFIHRD 129
Query: 459 VKSSNILLSDDFEPQLSDFGLASWLSTSSSHLTCTDVAGTFGYLAPEYFMHGKVSEKIDV 518
+ + N L+ D ++SDFG+ ++ +++ + APE F + K S K DV
Sbjct: 130 LAARNCLVDRDLCVKVSDFGMTRYV-LDDQYVSSVGTKFPVKWSAPEVFHYFKYSSKSDV 188
Query: 519 YAFGIVLLELLS-GKKPINSENPKGQESLVMWAKPILKDGKVSQLLDPSLDTD 570
+AFGI++ E+ S GK P + L ++ +LK + +L P L +D
Sbjct: 189 WAFGILMWEVFSLGKMPYD---------LYTNSEVVLKVSQGHRLYRPHLASD 232
>pdb|4FSY|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 75.5 bits (184), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 57/194 (29%), Positives = 95/194 (48%), Gaps = 18/194 (9%)
Query: 358 LAVKI--LKPSEDVLKEFASEIEIITALHHRNIISLFGFCFEDNNLLLVYDFLSRGSL-- 413
+AVKI +K + D + EI I L+H N++ +G E N L ++ S G L
Sbjct: 34 VAVKIVDMKRAVDCPENIKKEIXINKMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFD 93
Query: 414 --EENLHGNKKDGNAFGWTERYKVAVGVAEALDYLHNSCEQPVIHKDVKSSNILLSDDFE 471
E ++ + D F +++ GV YLH + H+D+K N+LL +
Sbjct: 94 RIEPDIGMPEPDAQRFF----HQLMAGVV----YLHGIG---ITHRDIKPENLLLDERDN 142
Query: 472 PQLSDFGLASWLSTSSSHLTCTDVAGTFGYLAPEYFMHGKV-SEKIDVYAFGIVLLELLS 530
++SDFGLA+ ++ + GT Y+APE + +E +DV++ GIVL +L+
Sbjct: 143 LKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLA 202
Query: 531 GKKPINSENPKGQE 544
G+ P + + QE
Sbjct: 203 GELPWDQPSDSCQE 216
>pdb|2QOK|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:s768a Triple Mutant
Length = 373
Score = 75.5 bits (184), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 61/212 (28%), Positives = 104/212 (49%), Gaps = 14/212 (6%)
Query: 331 SNFLPEYLVGKGGHSHVYRG--CLPDGKEL--AVKILKP--SEDVLKEFASEIEIITALH 384
+N + +VG G V G LP KE+ A+K LK +E ++F E I+
Sbjct: 45 TNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFD 104
Query: 385 HRNIISLFGFCFEDNNLLLVYDFLSRGSLEENLHGNKKDGNAFGWTERYKVAVGVAEALD 444
H NII L G + +++V +++ GSL+ L +K F + + G+A +
Sbjct: 105 HPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFL---RKHDAQFTVIQLVGMLRGIASGMK 161
Query: 445 YLHNSCEQPVIHKDVKSSNILLSDDFEPQLSDFGLASWLSTSSSHLTCTDVAGT-FGYLA 503
YL + +H+D+ + NIL++ + ++SDFGLA L T + +
Sbjct: 162 YL---SDMGYVHRDLAARNILINSNLVCKVSDFGLARVLEDDPEAAYTTRGGKIPIRWTS 218
Query: 504 PEYFMHGKVSEKIDVYAFGIVLLELLS-GKKP 534
PE + K + DV+++GIVL E++S G++P
Sbjct: 219 PEAIAYRKFTSASDVWSYGIVLWEVMSYGERP 250
>pdb|3ORM|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain D76a Mutant
Length = 311
Score = 75.5 bits (184), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 60/215 (27%), Positives = 111/215 (51%), Gaps = 21/215 (9%)
Query: 338 LVGKGGHSHVYRGC-LPDGKELAVKILKPSEDVLKE------FASEIEIITALHHRNIIS 390
++G GG S V+ L +++AVK+L+ D+ ++ F E + AL+H I++
Sbjct: 19 ILGFGGMSEVHLARDLRLHRDVAVKVLR--ADLARDPSFYLRFRREAQNAAALNHPAIVA 76
Query: 391 LFGFCFEDNNL----LLVYDFLSRGSLEENLHGNKKDGNAFGWTERYKVAVGVAEALDYL 446
++ + +V +++ +L + +H T + + V +A+A L
Sbjct: 77 VYATGEAETPAGPLPYIVMEYVDGVTLRDIVHTEGP------MTPKRAIEV-IADACQAL 129
Query: 447 HNSCEQPVIHKDVKSSNILLSDDFEPQLSDFGLASWLSTSSSHLTCTD-VAGTFGYLAPE 505
+ S + +IH+DVK +NI++S ++ DFG+A ++ S + +T T V GT YL+PE
Sbjct: 130 NFSHQNGIIHRDVKPANIMISATNAVKVMDFGIARAIADSGNSVTQTAAVIGTAQYLSPE 189
Query: 506 YFMHGKVSEKIDVYAFGIVLLELLSGKKPINSENP 540
V + DVY+ G VL E+L+G+ P ++P
Sbjct: 190 QARGDSVDARSDVYSLGCVLYEVLTGEPPFTGDSP 224
>pdb|3COK|A Chain A, Crystal Structure Of Plk4 Kinase
pdb|3COK|B Chain B, Crystal Structure Of Plk4 Kinase
Length = 278
Score = 75.5 bits (184), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 59/219 (26%), Positives = 107/219 (48%), Gaps = 15/219 (6%)
Query: 338 LVGKGGHSHVYRG-CLPDGKELAVKILKPSE----DVLKEFASEIEIITALHHRNIISLF 392
L+GKG + VYR + G E+A+K++ +++ +E++I L H +I+ L+
Sbjct: 18 LLGKGSFAGVYRAESIHTGLEVAIKMIDKKAMYKAGMVQRVQNEVKIHCQLKHPSILELY 77
Query: 393 GFCFEDNNLL-LVYDFLSRGSLEENLHGNKKDGNAFGWTERYKVAVGVAEALDYLHNSCE 451
+ FED+N + LV + G + L K F E + + YLH+
Sbjct: 78 NY-FEDSNYVYLVLEMCHNGEMNRYLKNRVK---PFSENEARHFMHQIITGMLYLHS--- 130
Query: 452 QPVIHKDVKSSNILLSDDFEPQLSDFGLASWLSTSSSHLTCTDVAGTFGYLAPEYFMHGK 511
++H+D+ SN+LL+ + +++DFGLA+ L H + GT Y++PE
Sbjct: 131 HGILHRDLTLSNLLLTRNMNIKIADFGLATQLKM--PHEKHYTLCGTPNYISPEIATRSA 188
Query: 512 VSEKIDVYAFGIVLLELLSGKKPINSENPKGQESLVMWA 550
+ DV++ G + LL G+ P +++ K + V+ A
Sbjct: 189 HGLESDVWSLGCMFYTLLIGRPPFDTDTVKNTLNKVVLA 227
>pdb|2BUJ|A Chain A, Crystal Structure Of The Human Serine-Threonine Kinase 16
In Complex With Staurosporine
pdb|2BUJ|B Chain B, Crystal Structure Of The Human Serine-Threonine Kinase 16
In Complex With Staurosporine
Length = 317
Score = 75.5 bits (184), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 64/220 (29%), Positives = 102/220 (46%), Gaps = 19/220 (8%)
Query: 339 VGKGGHSHV-YRGCLPDGKELAVK-ILKPSEDVLKEFASEIEIITALHHRNIISLFGFCF 396
+G+GG S+V L DG A+K IL + +E E ++ +H NI+ L +C
Sbjct: 37 LGEGGFSYVDLVEGLHDGHFYALKRILCHEQQDREEAQREADMHRLFNHPNILRLVAYCL 96
Query: 397 ED----NNLLLVYDFLSRGSLEENLHGNKKDGNAFGWTERYKVAVGVAEALDYLHNSCEQ 452
+ + L+ F RG+L + K GN + + +G+ L+ +H +
Sbjct: 97 RERGAKHEAWLLLPFFKRGTLWNEIERLKDKGNFLTEDQILWLLLGICRGLEAIH---AK 153
Query: 453 PVIHKDVKSSNILLSDDFEPQLSDFGLASW----LSTSSSHLTCTDVAG---TFGYLAPE 505
H+D+K +NILL D+ +P L D G + + S LT D A T Y APE
Sbjct: 154 GYAHRDLKPTNILLGDEGQPVLMDLGSMNQACIHVEGSRQALTLQDWAAQRCTISYRAPE 213
Query: 506 YF---MHGKVSEKIDVYAFGIVLLELLSGKKPINSENPKG 542
F H + E+ DV++ G VL ++ G+ P + KG
Sbjct: 214 LFSVQSHCVIDERTDVWSLGCVLYAMMFGEGPYDMVFQKG 253
>pdb|4FSZ|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 75.5 bits (184), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 57/194 (29%), Positives = 95/194 (48%), Gaps = 18/194 (9%)
Query: 358 LAVKI--LKPSEDVLKEFASEIEIITALHHRNIISLFGFCFEDNNLLLVYDFLSRGSL-- 413
+AVKI +K + D + EI I L+H N++ +G E N L ++ S G L
Sbjct: 34 VAVKIVDMKRAVDCPENIKKEIXINKMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFD 93
Query: 414 --EENLHGNKKDGNAFGWTERYKVAVGVAEALDYLHNSCEQPVIHKDVKSSNILLSDDFE 471
E ++ + D F +++ GV YLH + H+D+K N+LL +
Sbjct: 94 RIEPDIGMPEPDAQRFF----HQLMAGVV----YLHGIG---ITHRDIKPENLLLDERDN 142
Query: 472 PQLSDFGLASWLSTSSSHLTCTDVAGTFGYLAPEYFMHGKV-SEKIDVYAFGIVLLELLS 530
++SDFGLA+ ++ + GT Y+APE + +E +DV++ GIVL +L+
Sbjct: 143 LKISDFGLATVFRYNNRERLLNKMXGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLA 202
Query: 531 GKKPINSENPKGQE 544
G+ P + + QE
Sbjct: 203 GELPWDQPSDSCQE 216
>pdb|1PHK|A Chain A, Two Structures Of The Catalytic Domain Of Phosphorylase,
Kinase: An Active Protein Kinase Complexed With
Nucleotide, Substrate-Analogue And Product
Length = 298
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 66/223 (29%), Positives = 108/223 (48%), Gaps = 30/223 (13%)
Query: 332 NFLPEYLVGKGGHSHVYRGCL--PDGKELAVKILK-------PSEDV--LKEFA-SEIEI 379
N+ P+ ++G+G S V R C+ P KE AVKI+ +E+V L+E E++I
Sbjct: 18 NYEPKEILGRGVSS-VVRRCIHKPTCKEYAVKIIDVTGGGSFSAEEVQELREATLKEVDI 76
Query: 380 ITALH-HRNIISLFGFCFEDNNLLLVYDFLSRGSLEENLHGNKKDGNAFGWTERYKVAVG 438
+ + H NII L + LV+D + +G L + L + E K+
Sbjct: 77 LRKVSGHPNIIQLKDTYETNTFFFLVFDLMKKGELFDYL----TEKVTLSEKETRKIMRA 132
Query: 439 VAEALDYLHNSCEQPVIHKDVKSSNILLSDDFEPQLSDFGLASWLSTSSSHLTCTDVAGT 498
+ E + LH + ++H+D+K NILL DD +L+DFG + L +V GT
Sbjct: 133 LLEVICALH---KLNIVHRDLKPENILLDDDMNIKLTDFGFSCQLDPGEK---LREVCGT 186
Query: 499 FGYLAPEYFM------HGKVSEKIDVYAFGIVLLELLSGKKPI 535
YLAPE H +++D+++ G+++ LL+G P
Sbjct: 187 PSYLAPEIIECSMNDNHPGYGKEVDMWSTGVIMYTLLAGSPPF 229
>pdb|2YDJ|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
pdb|2YDJ|B Chain B, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 276
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 57/194 (29%), Positives = 95/194 (48%), Gaps = 18/194 (9%)
Query: 358 LAVKI--LKPSEDVLKEFASEIEIITALHHRNIISLFGFCFEDNNLLLVYDFLSRGSL-- 413
+AVKI +K + D + EI I L+H N++ +G E N L ++ S G L
Sbjct: 35 VAVKIVDMKRAVDCPENIKKEIXINKMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFD 94
Query: 414 --EENLHGNKKDGNAFGWTERYKVAVGVAEALDYLHNSCEQPVIHKDVKSSNILLSDDFE 471
E ++ + D F +++ GV YLH + H+D+K N+LL +
Sbjct: 95 RIEPDIGMPEPDAQRFF----HQLMAGVV----YLHGIG---ITHRDIKPENLLLDERDN 143
Query: 472 PQLSDFGLASWLSTSSSHLTCTDVAGTFGYLAPEYFMHGKV-SEKIDVYAFGIVLLELLS 530
++SDFGLA+ ++ + GT Y+APE + +E +DV++ GIVL +L+
Sbjct: 144 LKISDFGLATVFRYNNRERLLNKMXGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLA 203
Query: 531 GKKPINSENPKGQE 544
G+ P + + QE
Sbjct: 204 GELPWDQPSDSCQE 217
>pdb|4FR4|A Chain A, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|B Chain B, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|C Chain C, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|D Chain D, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|E Chain E, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|F Chain F, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
Length = 384
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 61/209 (29%), Positives = 104/209 (49%), Gaps = 28/209 (13%)
Query: 339 VGKGGHSHVYRGCLPDGKEL-AVKILKPSEDV----LKEFASEIEIITALHHRNIISLFG 393
+GKG V D K++ A+K + + V ++ E++I+ L H +++L+
Sbjct: 23 IGKGSFGKVCIVQKNDTKKMYAMKYMNKQKCVERNEVRNVFKELQIMQGLEHPFLVNLW- 81
Query: 394 FCFEDN-NLLLVYDFLSRGSL----EENLHGNKKDGNAFGWTERYKVAVGVAEALDYLHN 448
+ F+D ++ +V D L G L ++N+H ++ F + ALDYL N
Sbjct: 82 YSFQDEEDMFMVVDLLLGGDLRYHLQQNVHFKEETVKLF--------ICELVMALDYLQN 133
Query: 449 SCEQPVIHKDVKSSNILLSDDFEPQLSDFGLASWLSTSSSHLTCTDVAGTFGYLAPEYFM 508
Q +IH+D+K NILL + ++DF +A+ L + T +AGT Y+APE F
Sbjct: 134 ---QRIIHRDMKPDNILLDEHGHVHITDFNIAAMLPRETQ---ITTMAGTKPYMAPEMFS 187
Query: 509 HGK---VSEKIDVYAFGIVLLELLSGKKP 534
K S +D ++ G+ ELL G++P
Sbjct: 188 SRKGAGYSFAVDWWSLGVTAYELLRGRRP 216
>pdb|4FSU|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 57/194 (29%), Positives = 95/194 (48%), Gaps = 18/194 (9%)
Query: 358 LAVKI--LKPSEDVLKEFASEIEIITALHHRNIISLFGFCFEDNNLLLVYDFLSRGSL-- 413
+AVKI +K + D + EI I L+H N++ +G E N L ++ S G L
Sbjct: 34 VAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFD 93
Query: 414 --EENLHGNKKDGNAFGWTERYKVAVGVAEALDYLHNSCEQPVIHKDVKSSNILLSDDFE 471
E ++ + D F +++ GV YLH + H+D+K N+LL +
Sbjct: 94 RIEPDIGMPEPDAQRFF----HQLMAGVV----YLHGIG---ITHRDIKPENLLLDERDN 142
Query: 472 PQLSDFGLASWLSTSSSHLTCTDVAGTFGYLAPEYFMHGKV-SEKIDVYAFGIVLLELLS 530
++SDFGLA+ ++ + GT Y+APE + +E +DV++ GIVL +L+
Sbjct: 143 LKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLA 202
Query: 531 GKKPINSENPKGQE 544
G+ P + + QE
Sbjct: 203 GELPWDQPSDSCQE 216
>pdb|2PHK|A Chain A, The Crystal Structure Of A Phosphorylase Kinase Peptide
Substrate Complex: Kinase Substrate Recognition
Length = 277
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 66/223 (29%), Positives = 108/223 (48%), Gaps = 30/223 (13%)
Query: 332 NFLPEYLVGKGGHSHVYRGCL--PDGKELAVKILK-------PSEDV--LKEFA-SEIEI 379
N+ P+ ++G+G S V R C+ P KE AVKI+ +E+V L+E E++I
Sbjct: 5 NYEPKEILGRGVSS-VVRRCIHKPTCKEYAVKIIDVTGGGSFSAEEVQELREATLKEVDI 63
Query: 380 ITALH-HRNIISLFGFCFEDNNLLLVYDFLSRGSLEENLHGNKKDGNAFGWTERYKVAVG 438
+ + H NII L + LV+D + +G L + L + E K+
Sbjct: 64 LRKVSGHPNIIQLKDTYETNTFFFLVFDLMKKGELFDYL----TEKVTLSEKETRKIMRA 119
Query: 439 VAEALDYLHNSCEQPVIHKDVKSSNILLSDDFEPQLSDFGLASWLSTSSSHLTCTDVAGT 498
+ E + LH + ++H+D+K NILL DD +L+DFG + L +V GT
Sbjct: 120 LLEVICALH---KLNIVHRDLKPENILLDDDMNIKLTDFGFSCQLDPGEK---LREVCGT 173
Query: 499 FGYLAPEYFM------HGKVSEKIDVYAFGIVLLELLSGKKPI 535
YLAPE H +++D+++ G+++ LL+G P
Sbjct: 174 PSYLAPEIIECSMNDNHPGYGKEVDMWSTGVIMYTLLAGSPPF 216
>pdb|2BDW|A Chain A, Crystal Structure Of The Auto-Inhibited Kinase Domain Of
CalciumCALMODULIN ACTIVATED KINASE II
pdb|2BDW|B Chain B, Crystal Structure Of The Auto-Inhibited Kinase Domain Of
CalciumCALMODULIN ACTIVATED KINASE II
Length = 362
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 64/226 (28%), Positives = 111/226 (49%), Gaps = 23/226 (10%)
Query: 326 LLSATSNFLPEYLV----GKGGHSHVYRGCL--PDGKELAVKILKPSEDVLKEFAS---E 376
+++A++ F Y V GKG S V R C+ G E A KI+ + ++F E
Sbjct: 20 MMNASTKFSDNYDVKEELGKGAFS-VVRRCVHKTTGLEFAAKIINTKKLSARDFQKLERE 78
Query: 377 IEIITALHHRNIISLFGFCFEDNNLLLVYDFLSRGSLEENLHGNKKDGNAFGWTERYKVA 436
I L H NI+ L E++ LV+D ++ G L E++ + + +
Sbjct: 79 ARICRKLQHPNIVRLHDSIQEESFHYLVFDLVTGGELFEDIVARE----FYSEADASHCI 134
Query: 437 VGVAEALDYLHNSCEQPVIHKDVKSSNILLSDDFEP---QLSDFGLASWLSTSSSHLTCT 493
+ E++ Y H++ ++H+++K N+LL+ + +L+DFGLA ++ S +
Sbjct: 135 QQILESIAYCHSNG---IVHRNLKPENLLLASKAKGAAVKLADFGLAIEVNDSEA---WH 188
Query: 494 DVAGTFGYLAPEYFMHGKVSEKIDVYAFGIVLLELLSGKKPINSEN 539
AGT GYL+PE S+ +D++A G++L LL G P E+
Sbjct: 189 GFAGTPGYLSPEVLKKDPYSKPVDIWACGVILYILLVGYPPFWDED 234
>pdb|2J51|A Chain A, Crystal Structure Of Human Ste20-Like Kinase Bound To 5-
Amino-3-((4-(Aminosulfonyl)phenyl)amino)-N-(2,6-
Difluorophenyl)-1h-1,2,4-Triazole-1-Carbothioamide
Length = 325
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 56/209 (26%), Positives = 107/209 (51%), Gaps = 15/209 (7%)
Query: 339 VGKGGHSHVYRGCLPDGKELAVK--ILKPSEDVLKEFASEIEIITALHHRNIISLFGFCF 396
+G G VY+ + LA I SE+ L+++ EI+I+ + H NI+ L +
Sbjct: 45 LGDGAFGKVYKAQNKETSVLAAAKVIDTKSEEELEDYMVEIDILASCDHPNIVKLLDAFY 104
Query: 397 EDNNLLLVYDFLSRGSLEENLHGNKKDGNAFGWTERYKVAVGVAEALDYLHNSCEQPVIH 456
+NNL ++ +F + G+++ + ++ ++ V +AL+YLH++ +IH
Sbjct: 105 YENNLWILIEFCAGGAVDAVMLELER---PLTESQIQVVCKQTLDALNYLHDN---KIIH 158
Query: 457 KDVKSSNILLSDDFEPQLSDFGLASWLSTSSSHLTCTDVAGTFGYLAPEYFMHGKVSE-- 514
+D+K+ NIL + D + +L+DFG+++ + + GT ++APE M +
Sbjct: 159 RDLKAGNILFTLDGDIKLADFGVSA--KNTRTIQRRDSFIGTPYWMAPEVVMCETSKDRP 216
Query: 515 ---KIDVYAFGIVLLELLSGKKPINSENP 540
K DV++ GI L+E+ + P + NP
Sbjct: 217 YDYKADVWSLGITLIEMAEIEPPHHELNP 245
>pdb|4FSN|A Chain A, Crystal Structure Of The Chk1
Length = 278
Score = 74.7 bits (182), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 57/194 (29%), Positives = 95/194 (48%), Gaps = 18/194 (9%)
Query: 358 LAVKI--LKPSEDVLKEFASEIEIITALHHRNIISLFGFCFEDNNLLLVYDFLSRGSL-- 413
+AVKI +K + D + EI I L+H N++ +G E N L ++ S G L
Sbjct: 33 VAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFD 92
Query: 414 --EENLHGNKKDGNAFGWTERYKVAVGVAEALDYLHNSCEQPVIHKDVKSSNILLSDDFE 471
E ++ + D F +++ GV YLH + H+D+K N+LL +
Sbjct: 93 RIEPDIGMPEPDAQRFF----HQLMAGVV----YLHGIG---ITHRDIKPENLLLDERDN 141
Query: 472 PQLSDFGLASWLSTSSSHLTCTDVAGTFGYLAPEYFMHGKV-SEKIDVYAFGIVLLELLS 530
++SDFGLA+ ++ + GT Y+APE + +E +DV++ GIVL +L+
Sbjct: 142 LKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLA 201
Query: 531 GKKPINSENPKGQE 544
G+ P + + QE
Sbjct: 202 GELPWDQPSDSCQE 215
>pdb|4FSM|A Chain A, Crystal Structure Of The Chk1
pdb|4FSQ|A Chain A, Crystal Structure Of The Chk1
pdb|4FSR|A Chain A, Crystal Structure Of The Chk1
pdb|4FT0|A Chain A, Crystal Structure Of The Chk1
pdb|4FT5|A Chain A, Crystal Structure Of The Chk1
pdb|4FT7|A Chain A, Crystal Structure Of The Chk1
pdb|4FT9|A Chain A, Crystal Structure Of The Chk1
pdb|4FTI|A Chain A, Crystal Structure Of The Chk1
pdb|4FTJ|A Chain A, Crystal Structure Of The Chk1
pdb|4FTK|A Chain A, Crystal Structure Of The Chk1
pdb|4FTL|A Chain A, Crystal Structure Of The Chk1
pdb|4FTM|A Chain A, Crystal Structure Of The Chk1
pdb|4FTO|A Chain A, Crystal Structure Of The Chk1
pdb|4FTR|A Chain A, Crystal Structure Of The Chk1
pdb|4FTT|A Chain A, Crystal Structure Of The Chk1
pdb|4FTU|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 74.7 bits (182), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 57/194 (29%), Positives = 95/194 (48%), Gaps = 18/194 (9%)
Query: 358 LAVKI--LKPSEDVLKEFASEIEIITALHHRNIISLFGFCFEDNNLLLVYDFLSRGSL-- 413
+AVKI +K + D + EI I L+H N++ +G E N L ++ S G L
Sbjct: 34 VAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFD 93
Query: 414 --EENLHGNKKDGNAFGWTERYKVAVGVAEALDYLHNSCEQPVIHKDVKSSNILLSDDFE 471
E ++ + D F +++ GV YLH + H+D+K N+LL +
Sbjct: 94 RIEPDIGMPEPDAQRFF----HQLMAGVV----YLHGIG---ITHRDIKPENLLLDERDN 142
Query: 472 PQLSDFGLASWLSTSSSHLTCTDVAGTFGYLAPEYFMHGKV-SEKIDVYAFGIVLLELLS 530
++SDFGLA+ ++ + GT Y+APE + +E +DV++ GIVL +L+
Sbjct: 143 LKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLA 202
Query: 531 GKKPINSENPKGQE 544
G+ P + + QE
Sbjct: 203 GELPWDQPSDSCQE 216
>pdb|2BR1|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRB|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRG|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRH|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRM|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRN|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRO|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2C3J|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2C3K|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2C3L|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2CGU|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGV|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGW|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGX|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|3NLB|A Chain A, Novel Kinase Profile Highlights The Temporal Basis Of
Context Dependent Checkpoint Pathways To Cell Death
Length = 297
Score = 74.7 bits (182), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 57/194 (29%), Positives = 95/194 (48%), Gaps = 18/194 (9%)
Query: 358 LAVKI--LKPSEDVLKEFASEIEIITALHHRNIISLFGFCFEDNNLLLVYDFLSRGSL-- 413
+AVKI +K + D + EI I L+H N++ +G E N L ++ S G L
Sbjct: 35 VAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFD 94
Query: 414 --EENLHGNKKDGNAFGWTERYKVAVGVAEALDYLHNSCEQPVIHKDVKSSNILLSDDFE 471
E ++ + D F +++ GV YLH + H+D+K N+LL +
Sbjct: 95 RIEPDIGMPEPDAQRFF----HQLMAGVV----YLHGIG---ITHRDIKPENLLLDERDN 143
Query: 472 PQLSDFGLASWLSTSSSHLTCTDVAGTFGYLAPEYFMHGKV-SEKIDVYAFGIVLLELLS 530
++SDFGLA+ ++ + GT Y+APE + +E +DV++ GIVL +L+
Sbjct: 144 LKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLA 203
Query: 531 GKKPINSENPKGQE 544
G+ P + + QE
Sbjct: 204 GELPWDQPSDSCQE 217
>pdb|1IA8|A Chain A, The 1.7 A Crystal Structure Of Human Cell Cycle Checkpoint
Kinase Chk1
pdb|1NVQ|A Chain A, The Complex Structure Of Checkpoint Kinase Chk1UCN-01
pdb|1NVR|A Chain A, The Complex Structure Of Checkpoint Kinase
Chk1STAUROSPORINE
pdb|1NVS|A Chain A, The Complex Structure Of Checkpoint Kinase Chk1SB218078
pdb|2WMQ|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMR|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMS|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMT|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMU|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMV|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMX|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMW|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XEY|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XF0|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XEZ|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2X8D|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2X8I|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2YM3|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM4|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM5|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM6|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM7|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM8|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YDI|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 289
Score = 74.7 bits (182), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 57/194 (29%), Positives = 95/194 (48%), Gaps = 18/194 (9%)
Query: 358 LAVKI--LKPSEDVLKEFASEIEIITALHHRNIISLFGFCFEDNNLLLVYDFLSRGSL-- 413
+AVKI +K + D + EI I L+H N++ +G E N L ++ S G L
Sbjct: 35 VAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFD 94
Query: 414 --EENLHGNKKDGNAFGWTERYKVAVGVAEALDYLHNSCEQPVIHKDVKSSNILLSDDFE 471
E ++ + D F +++ GV YLH + H+D+K N+LL +
Sbjct: 95 RIEPDIGMPEPDAQRFF----HQLMAGVV----YLHGIG---ITHRDIKPENLLLDERDN 143
Query: 472 PQLSDFGLASWLSTSSSHLTCTDVAGTFGYLAPEYFMHGKV-SEKIDVYAFGIVLLELLS 530
++SDFGLA+ ++ + GT Y+APE + +E +DV++ GIVL +L+
Sbjct: 144 LKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLA 203
Query: 531 GKKPINSENPKGQE 544
G+ P + + QE
Sbjct: 204 GELPWDQPSDSCQE 217
>pdb|1ZLT|A Chain A, Crystal Structure Of Chk1 Complexed With A Hymenaldisine
Analog
pdb|2GDO|A Chain A, 4-(aminoalkylamino)-3-benzimidazole-quinolinones As Potent
Chk1 Inhibitors
Length = 295
Score = 74.7 bits (182), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 57/194 (29%), Positives = 95/194 (48%), Gaps = 18/194 (9%)
Query: 358 LAVKI--LKPSEDVLKEFASEIEIITALHHRNIISLFGFCFEDNNLLLVYDFLSRGSL-- 413
+AVKI +K + D + EI I L+H N++ +G E N L ++ S G L
Sbjct: 35 VAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFD 94
Query: 414 --EENLHGNKKDGNAFGWTERYKVAVGVAEALDYLHNSCEQPVIHKDVKSSNILLSDDFE 471
E ++ + D F +++ GV YLH + H+D+K N+LL +
Sbjct: 95 RIEPDIGMPEPDAQRFF----HQLMAGVV----YLHGIG---ITHRDIKPENLLLDERDN 143
Query: 472 PQLSDFGLASWLSTSSSHLTCTDVAGTFGYLAPEYFMHGKV-SEKIDVYAFGIVLLELLS 530
++SDFGLA+ ++ + GT Y+APE + +E +DV++ GIVL +L+
Sbjct: 144 LKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLA 203
Query: 531 GKKPINSENPKGQE 544
G+ P + + QE
Sbjct: 204 GELPWDQPSDSCQE 217
>pdb|1MRU|A Chain A, Intracellular SerTHR PROTEIN KINASE DOMAIN OF
Mycobacterium Tuberculosis Pknb.
pdb|1MRU|B Chain B, Intracellular SerTHR PROTEIN KINASE DOMAIN OF
Mycobacterium Tuberculosis Pknb
Length = 311
Score = 74.7 bits (182), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 60/215 (27%), Positives = 111/215 (51%), Gaps = 21/215 (9%)
Query: 338 LVGKGGHSHVYRGC-LPDGKELAVKILKPSEDVLKE------FASEIEIITALHHRNIIS 390
++G GG S V+ L +++AVK+L+ D+ ++ F E + AL+H I++
Sbjct: 19 ILGFGGMSEVHLARDLRLHRDVAVKVLR--ADLARDPSFYLRFRREAQNAAALNHPAIVA 76
Query: 391 LFGFCFEDNNL----LLVYDFLSRGSLEENLHGNKKDGNAFGWTERYKVAVGVAEALDYL 446
++ + +V +++ +L + +H T + + V +A+A L
Sbjct: 77 VYDTGEAETPAGPLPYIVMEYVDGVTLRDIVHTEGP------MTPKRAIEV-IADACQAL 129
Query: 447 HNSCEQPVIHKDVKSSNILLSDDFEPQLSDFGLASWLSTSSSHLTCTD-VAGTFGYLAPE 505
+ S + +IH+DVK +NI++S ++ DFG+A ++ S + +T T V GT YL+PE
Sbjct: 130 NFSHQNGIIHRDVKPANIMISATNAVKVMDFGIARAIADSGNSVTQTAAVIGTAQYLSPE 189
Query: 506 YFMHGKVSEKIDVYAFGIVLLELLSGKKPINSENP 540
V + DVY+ G VL E+L+G+ P ++P
Sbjct: 190 QARGDSVDARSDVYSLGCVLYEVLTGEPPFTGDSP 224
>pdb|2HOG|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 20
pdb|2HXL|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 1
pdb|2HXQ|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 2
pdb|2HY0|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 22
pdb|3F9N|A Chain A, Crystal Structure Of Chk1 Kinase In Complex With Inhibitor
38
Length = 322
Score = 74.7 bits (182), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 57/194 (29%), Positives = 95/194 (48%), Gaps = 18/194 (9%)
Query: 358 LAVKI--LKPSEDVLKEFASEIEIITALHHRNIISLFGFCFEDNNLLLVYDFLSRGSL-- 413
+AVKI +K + D + EI I L+H N++ +G E N L ++ S G L
Sbjct: 34 VAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFD 93
Query: 414 --EENLHGNKKDGNAFGWTERYKVAVGVAEALDYLHNSCEQPVIHKDVKSSNILLSDDFE 471
E ++ + D F +++ GV YLH + H+D+K N+LL +
Sbjct: 94 RIEPDIGMPEPDAQRF----FHQLMAGVV----YLHGIG---ITHRDIKPENLLLDERDN 142
Query: 472 PQLSDFGLASWLSTSSSHLTCTDVAGTFGYLAPEYFMHGKV-SEKIDVYAFGIVLLELLS 530
++SDFGLA+ ++ + GT Y+APE + +E +DV++ GIVL +L+
Sbjct: 143 LKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLA 202
Query: 531 GKKPINSENPKGQE 544
G+ P + + QE
Sbjct: 203 GELPWDQPSDSCQE 216
>pdb|2JFM|A Chain A, Crystal Structure Of Human Ste20-Like Kinase (Unliganded
Form)
Length = 325
Score = 74.7 bits (182), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 57/210 (27%), Positives = 109/210 (51%), Gaps = 17/210 (8%)
Query: 339 VGKGGHSHVYRGCLPDGKELAVK--ILKPSEDVLKEFASEIEIITALHHRNIISLFGFCF 396
+G G VY+ + LA I SE+ L+++ EI+I+ + H NI+ L +
Sbjct: 45 LGDGAFGKVYKAQNKETSVLAAAKVIDTKSEEELEDYMVEIDILASCDHPNIVKLLDAFY 104
Query: 397 EDNNLLLVYDFLSRGSLEENLHGNKKDGNAFGWTERYKVAVGVAEALDYLHNSCEQPVIH 456
+NNL ++ +F + G+++ + ++ ++ V +AL+YLH++ +IH
Sbjct: 105 YENNLWILIEFCAGGAVDAVMLELER---PLTESQIQVVCKQTLDALNYLHDN---KIIH 158
Query: 457 KDVKSSNILLSDDFEPQLSDFGLASWLSTSSSHLTCTD-VAGTFGYLAPEYFMHGKVSE- 514
+D+K+ NIL + D + +L+DFG++ + ++ + D GT ++APE M +
Sbjct: 159 RDLKAGNILFTLDGDIKLADFGVS---AKNTRXIQRRDSFIGTPYWMAPEVVMCETSKDR 215
Query: 515 ----KIDVYAFGIVLLELLSGKKPINSENP 540
K DV++ GI L+E+ + P + NP
Sbjct: 216 PYDYKADVWSLGITLIEMAEIEPPHHELNP 245
>pdb|2JFL|A Chain A, Crystal Structure Of Human Ste20-Like Kinase (
Diphosphorylated Form) Bound To 5- Amino-3-((4-(
Aminosulfonyl)phenyl)amino)-N-(2,6-
Difluorophenyl)-1h-1,2, 4-Triazole-1-Carbothioamide
Length = 325
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 57/210 (27%), Positives = 109/210 (51%), Gaps = 17/210 (8%)
Query: 339 VGKGGHSHVYRGCLPDGKELAVK--ILKPSEDVLKEFASEIEIITALHHRNIISLFGFCF 396
+G G VY+ + LA I SE+ L+++ EI+I+ + H NI+ L +
Sbjct: 45 LGDGAFGKVYKAQNKETSVLAAAKVIDTKSEEELEDYMVEIDILASCDHPNIVKLLDAFY 104
Query: 397 EDNNLLLVYDFLSRGSLEENLHGNKKDGNAFGWTERYKVAVGVAEALDYLHNSCEQPVIH 456
+NNL ++ +F + G+++ + ++ ++ V +AL+YLH++ +IH
Sbjct: 105 YENNLWILIEFCAGGAVDAVMLELER---PLTESQIQVVCKQTLDALNYLHDN---KIIH 158
Query: 457 KDVKSSNILLSDDFEPQLSDFGLASWLSTSSSHLTCTD-VAGTFGYLAPEYFMHGKVSE- 514
+D+K+ NIL + D + +L+DFG++ + ++ + D GT ++APE M +
Sbjct: 159 RDLKAGNILFTLDGDIKLADFGVS---AKNTRXIQRRDXFIGTPYWMAPEVVMCETSKDR 215
Query: 515 ----KIDVYAFGIVLLELLSGKKPINSENP 540
K DV++ GI L+E+ + P + NP
Sbjct: 216 PYDYKADVWSLGITLIEMAEIEPPHHELNP 245
>pdb|1QL6|A Chain A, The Catalytic Mechanism Of Phosphorylase Kinase Probed By
Mutational Studies
Length = 298
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 66/223 (29%), Positives = 107/223 (47%), Gaps = 30/223 (13%)
Query: 332 NFLPEYLVGKGGHSHVYRGCL--PDGKELAVKILK-------PSEDV--LKEFA-SEIEI 379
N+ P+ ++G+G S V R C+ P KE AVKI+ +E+V L+E E++I
Sbjct: 18 NYEPKEILGRGVSS-VVRRCIHKPTCKEYAVKIIDVTGGGSFSAEEVQELREATLKEVDI 76
Query: 380 ITALH-HRNIISLFGFCFEDNNLLLVYDFLSRGSLEENLHGNKKDGNAFGWTERYKVAVG 438
+ + H NII L + LV+D + +G L + L + E K+
Sbjct: 77 LRKVSGHPNIIQLKDTYETNTFFFLVFDLMKKGELFDYL----TEKVTLSEKETRKIMRA 132
Query: 439 VAEALDYLHNSCEQPVIHKDVKSSNILLSDDFEPQLSDFGLASWLSTSSSHLTCTDVAGT 498
+ E + LH + ++H+D+K NILL DD +L+DFG + L V GT
Sbjct: 133 LLEVICALH---KLNIVHRDLKPENILLDDDMNIKLTDFGFSCQLDPGEK---LRSVCGT 186
Query: 499 FGYLAPEYFM------HGKVSEKIDVYAFGIVLLELLSGKKPI 535
YLAPE H +++D+++ G+++ LL+G P
Sbjct: 187 PSYLAPEIIECSMNDNHPGYGKEVDMWSTGVIMYTLLAGSPPF 229
>pdb|2X8E|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2YER|A Chain A, Synthesis And Evaluation Of Triazolones As Checkpoint
Kinase 1 Inhibitors
pdb|2YEX|A Chain A, Synthesis And Evaluation Of Triazolones As Checkpoint
Kinase 1 Inhibitors
pdb|2YDK|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 276
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 57/194 (29%), Positives = 95/194 (48%), Gaps = 18/194 (9%)
Query: 358 LAVKI--LKPSEDVLKEFASEIEIITALHHRNIISLFGFCFEDNNLLLVYDFLSRGSL-- 413
+AVKI +K + D + EI I L+H N++ +G E N L ++ S G L
Sbjct: 35 VAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFD 94
Query: 414 --EENLHGNKKDGNAFGWTERYKVAVGVAEALDYLHNSCEQPVIHKDVKSSNILLSDDFE 471
E ++ + D F +++ GV YLH + H+D+K N+LL +
Sbjct: 95 RIEPDIGMPEPDAQRFF----HQLMAGVV----YLHGIG---ITHRDIKPENLLLDERDN 143
Query: 472 PQLSDFGLASWLSTSSSHLTCTDVAGTFGYLAPEYFMHGKV-SEKIDVYAFGIVLLELLS 530
++SDFGLA+ ++ + GT Y+APE + +E +DV++ GIVL +L+
Sbjct: 144 LKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLA 203
Query: 531 GKKPINSENPKGQE 544
G+ P + + QE
Sbjct: 204 GELPWDQPSDSCQE 217
>pdb|4HZS|A Chain A, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|B Chain B, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|C Chain C, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|D Chain D, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
Length = 341
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 64/207 (30%), Positives = 98/207 (47%), Gaps = 19/207 (9%)
Query: 339 VGKGGHSHVYRGCL--PDGK--ELAVKILKP----SEDVLKEFASEIEIITALHHRNIIS 390
+G G V RG P GK +AVK LKP + + +F E+ + +L HRN+I
Sbjct: 20 LGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIR 79
Query: 391 LFGFCFEDNNLLLVYDFLSRGSLEENLHGNKKDGN-AFGWTERYKVAVGVAEALDYLHNS 449
L+G + +V + GSL + L K G+ G RY AV VAE + YL +
Sbjct: 80 LYGVVLTPP-MKMVTELAPLGSLLDRL--RKHQGHFLLGTLSRY--AVQVAEGMGYLES- 133
Query: 450 CEQPVIHKDVKSSNILLSDDFEPQLSDFGLASWLSTSSSHLTCTDVAGT-FGYLAPEYFM 508
+ IH+D+ + N+LL+ ++ DFGL L + H + F + APE
Sbjct: 134 --KRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRKVPFAWCAPESLK 191
Query: 509 HGKVSEKIDVYAFGIVLLELLS-GKKP 534
S D + FG+ L E+ + G++P
Sbjct: 192 TRTFSHASDTWMFGVTLWEMFTYGQEP 218
>pdb|4FT3|A Chain A, Crystal Structure Of The Chk1
pdb|4GH2|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 57/194 (29%), Positives = 95/194 (48%), Gaps = 18/194 (9%)
Query: 358 LAVKI--LKPSEDVLKEFASEIEIITALHHRNIISLFGFCFEDNNLLLVYDFLSRGSL-- 413
+AVKI +K + D + EI I L+H N++ +G E N L ++ S G L
Sbjct: 34 VAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFD 93
Query: 414 --EENLHGNKKDGNAFGWTERYKVAVGVAEALDYLHNSCEQPVIHKDVKSSNILLSDDFE 471
E ++ + D F +++ GV YLH + H+D+K N+LL +
Sbjct: 94 RIEPDIGMPEPDAQRFF----HQLMAGVV----YLHGIG---ITHRDIKPENLLLDERDN 142
Query: 472 PQLSDFGLASWLSTSSSHLTCTDVAGTFGYLAPEYFMHGKV-SEKIDVYAFGIVLLELLS 530
++SDFGLA+ ++ + GT Y+APE + +E +DV++ GIVL +L+
Sbjct: 143 LKISDFGLATVFRYNNRERLLNKMXGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLA 202
Query: 531 GKKPINSENPKGQE 544
G+ P + + QE
Sbjct: 203 GELPWDQPSDSXQE 216
>pdb|2R0U|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 54
pdb|2QHM|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 2a
pdb|2QHN|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 1a
pdb|3TKH|A Chain A, Crystal Structure Of Chk1 In Complex With Inhibitor S01
pdb|3TKI|A Chain A, Crystal Structure Of Chk1 In Complex With Inhibitor S25
Length = 323
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 57/194 (29%), Positives = 95/194 (48%), Gaps = 18/194 (9%)
Query: 358 LAVKI--LKPSEDVLKEFASEIEIITALHHRNIISLFGFCFEDNNLLLVYDFLSRGSL-- 413
+AVKI +K + D + EI I L+H N++ +G E N L ++ S G L
Sbjct: 35 VAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFD 94
Query: 414 --EENLHGNKKDGNAFGWTERYKVAVGVAEALDYLHNSCEQPVIHKDVKSSNILLSDDFE 471
E ++ + D F +++ GV YLH + H+D+K N+LL +
Sbjct: 95 RIEPDIGMPEPDAQRF----FHQLMAGVV----YLHGIG---ITHRDIKPENLLLDERDN 143
Query: 472 PQLSDFGLASWLSTSSSHLTCTDVAGTFGYLAPEYFMHGKV-SEKIDVYAFGIVLLELLS 530
++SDFGLA+ ++ + GT Y+APE + +E +DV++ GIVL +L+
Sbjct: 144 LKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLA 203
Query: 531 GKKPINSENPKGQE 544
G+ P + + QE
Sbjct: 204 GELPWDQPSDSCQE 217
>pdb|2QOO|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:y742f Triple Mutant
Length = 373
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 60/212 (28%), Positives = 104/212 (49%), Gaps = 14/212 (6%)
Query: 331 SNFLPEYLVGKGGHSHVYRG--CLPDGKEL--AVKILKP--SEDVLKEFASEIEIITALH 384
+N + +VG G V G LP KE+ A+K LK +E ++F E I+
Sbjct: 45 TNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFD 104
Query: 385 HRNIISLFGFCFEDNNLLLVYDFLSRGSLEENLHGNKKDGNAFGWTERYKVAVGVAEALD 444
H NII L G + +++V +++ GSL+ L +K F + + G+A +
Sbjct: 105 HPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFL---RKHDAQFTVIQLVGMLRGIASGMK 161
Query: 445 YLHNSCEQPVIHKDVKSSNILLSDDFEPQLSDFGLASWLSTSSSHLTCTDVAGT-FGYLA 503
YL + +H+D+ + NIL++ + ++SDFGL+ L T + +
Sbjct: 162 YL---SDMGFVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTS 218
Query: 504 PEYFMHGKVSEKIDVYAFGIVLLELLS-GKKP 534
PE + K + DV+++GIVL E++S G++P
Sbjct: 219 PEAIAYRKFTSASDVWSYGIVLWEVMSYGERP 250
>pdb|1ZYS|A Chain A, Co-Crystal Structure Of Checkpoint Kinase Chk1 With A
Pyrrolo-Pyridine Inhibitor
Length = 273
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 57/194 (29%), Positives = 95/194 (48%), Gaps = 18/194 (9%)
Query: 358 LAVKI--LKPSEDVLKEFASEIEIITALHHRNIISLFGFCFEDNNLLLVYDFLSRGSL-- 413
+AVKI +K + D + EI I L+H N++ +G E N L ++ S G L
Sbjct: 35 VAVKIVDMKRAVDCPENIKKEICINAMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFD 94
Query: 414 --EENLHGNKKDGNAFGWTERYKVAVGVAEALDYLHNSCEQPVIHKDVKSSNILLSDDFE 471
E ++ + D F +++ GV YLH + H+D+K N+LL +
Sbjct: 95 RIEPDIGMPEPDAQRFF----HQLMAGVV----YLHGIG---ITHRDIKPENLLLDERDN 143
Query: 472 PQLSDFGLASWLSTSSSHLTCTDVAGTFGYLAPEYFMHGKV-SEKIDVYAFGIVLLELLS 530
++SDFGLA+ ++ + GT Y+APE + +E +DV++ GIVL +L+
Sbjct: 144 LKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLA 203
Query: 531 GKKPINSENPKGQE 544
G+ P + + QE
Sbjct: 204 GELPWDQPSDSCQE 217
>pdb|4FSW|A Chain A, Crystal Structure Of The Chk1
pdb|4FTA|A Chain A, Crystal Structure Of The Chk1
pdb|4FTC|A Chain A, Crystal Structure Of The Chk1
pdb|4FTN|A Chain A, Crystal Structure Of The Chk1
pdb|4FTQ|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 57/194 (29%), Positives = 95/194 (48%), Gaps = 18/194 (9%)
Query: 358 LAVKI--LKPSEDVLKEFASEIEIITALHHRNIISLFGFCFEDNNLLLVYDFLSRGSL-- 413
+AVKI +K + D + EI I L+H N++ +G E N L ++ S G L
Sbjct: 34 VAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFD 93
Query: 414 --EENLHGNKKDGNAFGWTERYKVAVGVAEALDYLHNSCEQPVIHKDVKSSNILLSDDFE 471
E ++ + D F +++ GV YLH + H+D+K N+LL +
Sbjct: 94 RIEPDIGMPEPDAQRFF----HQLMAGVV----YLHGIG---ITHRDIKPENLLLDERDN 142
Query: 472 PQLSDFGLASWLSTSSSHLTCTDVAGTFGYLAPEYFMHGKV-SEKIDVYAFGIVLLELLS 530
++SDFGLA+ ++ + GT Y+APE + +E +DV++ GIVL +L+
Sbjct: 143 LKISDFGLATVFRYNNRERLLNKMXGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLA 202
Query: 531 GKKPINSENPKGQE 544
G+ P + + QE
Sbjct: 203 GELPWDQPSDSCQE 216
>pdb|3FXX|A Chain A, Human Epha3 Kinase And Juxtamembrane Region Bound To
Substrate Kqwdnye[ptyr]iw
pdb|3FY2|A Chain A, Human Epha3 Kinase And Juxtamembrane Region Bound To
Substrate Kqwdnyefiw
Length = 371
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 60/212 (28%), Positives = 104/212 (49%), Gaps = 14/212 (6%)
Query: 331 SNFLPEYLVGKGGHSHVYRG--CLPDGKEL--AVKILKP--SEDVLKEFASEIEIITALH 384
+N + +VG G V G LP KE+ A+K LK +E ++F E I+
Sbjct: 43 TNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFD 102
Query: 385 HRNIISLFGFCFEDNNLLLVYDFLSRGSLEENLHGNKKDGNAFGWTERYKVAVGVAEALD 444
H NII L G + +++V +++ GSL+ L +K F + + G+A +
Sbjct: 103 HPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFL---RKHDAQFTVIQLVGMLRGIASGMK 159
Query: 445 YLHNSCEQPVIHKDVKSSNILLSDDFEPQLSDFGLASWLSTSSSHLTCTDVAGT-FGYLA 503
YL + +H+D+ + NIL++ + ++SDFGL+ L T + +
Sbjct: 160 YL---SDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTS 216
Query: 504 PEYFMHGKVSEKIDVYAFGIVLLELLS-GKKP 534
PE + K + DV+++GIVL E++S G++P
Sbjct: 217 PEAIAYRKFTSASDVWSYGIVLWEVMSYGERP 248
>pdb|2GSF|A Chain A, The Human Epha3 Receptor Tyrosine Kinase And Juxtamembrane
Region
pdb|2QO2|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Dephosphorylated, Apo Structure
pdb|2QO9|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Phosphorylated, Amp-pnp Bound
Length = 373
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 60/212 (28%), Positives = 104/212 (49%), Gaps = 14/212 (6%)
Query: 331 SNFLPEYLVGKGGHSHVYRG--CLPDGKEL--AVKILKP--SEDVLKEFASEIEIITALH 384
+N + +VG G V G LP KE+ A+K LK +E ++F E I+
Sbjct: 45 TNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFD 104
Query: 385 HRNIISLFGFCFEDNNLLLVYDFLSRGSLEENLHGNKKDGNAFGWTERYKVAVGVAEALD 444
H NII L G + +++V +++ GSL+ L +K F + + G+A +
Sbjct: 105 HPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFL---RKHDAQFTVIQLVGMLRGIASGMK 161
Query: 445 YLHNSCEQPVIHKDVKSSNILLSDDFEPQLSDFGLASWLSTSSSHLTCTDVAGT-FGYLA 503
YL + +H+D+ + NIL++ + ++SDFGL+ L T + +
Sbjct: 162 YL---SDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTS 218
Query: 504 PEYFMHGKVSEKIDVYAFGIVLLELLS-GKKP 534
PE + K + DV+++GIVL E++S G++P
Sbjct: 219 PEAIAYRKFTSASDVWSYGIVLWEVMSYGERP 250
>pdb|1S9I|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 2 (Mek2)in A Complex With Ligand And Mgatp
pdb|1S9I|B Chain B, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 2 (Mek2)in A Complex With Ligand And Mgatp
Length = 354
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 56/210 (26%), Positives = 105/210 (50%), Gaps = 19/210 (9%)
Query: 353 PDGKELAVKIL----KPSEDVLKEFASEIEIITALHHRNIISLFGFCFEDNNLLLVYDFL 408
P G +A K++ KP+ + + E++++ + I+ +G + D + + + +
Sbjct: 39 PSGLIMARKLIHLEIKPA--IRNQIIRELQVLHECNSPYIVGFYGAFYSDGEISICMEHM 96
Query: 409 SRGSLEENLHGNKKDGNAFGWTERYKVAVGVAEALDYLHNSCEQPVIHKDVKSSNILLSD 468
GSL++ L K+ KV++ V L YL + ++H+DVK SNIL++
Sbjct: 97 DGGSLDQVL----KEAKRIPEEILGKVSIAVLRGLAYLREKHQ--IMHRDVKPSNILVNS 150
Query: 469 DFEPQLSDFGLASWLSTSSSHLTCTDVAGTFGYLAPEYFMHGKVSEKIDVYAFGIVLLEL 528
E +L DFG++ L S ++ GT Y+APE S + D+++ G+ L+EL
Sbjct: 151 RGEIKLCDFGVSGQLIDSMAN----SFVGTRSYMAPERLQGTHYSVQSDIWSMGLSLVEL 206
Query: 529 LSGKKPINSENPKGQESLVMWAKPILKDGK 558
G+ PI P +E ++ +P++ DG+
Sbjct: 207 AVGRYPIPP--PDAKELEAIFGRPVV-DGE 233
>pdb|3OT3|A Chain A, X-Ray Crystal Structure Of Compound 22k Bound To Human
Chk1 Kinase Domain
pdb|3OT8|A Chain A, X-Ray Crystal Structure Of Compound 17r Bound To Human
Chk1 Kinase Domain
pdb|3PA3|A Chain A, X-Ray Crystal Structure Of Compound 70 Bound To Human Chk1
Kinase Domain
pdb|3PA4|A Chain A, X-Ray Crystal Structure Of Compound 2a Bound To Human Chk1
Kinase Domain
pdb|3PA5|A Chain A, X-Ray Crystal Structure Of Compound 1 Bound To Human Chk1
Kinase Domain
pdb|3U9N|A Chain A, X-Ray Crystal Structure Of Compound 1 Bound To Human Chk1
Kinase Domain
Length = 273
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 57/194 (29%), Positives = 95/194 (48%), Gaps = 18/194 (9%)
Query: 358 LAVKI--LKPSEDVLKEFASEIEIITALHHRNIISLFGFCFEDNNLLLVYDFLSRGSL-- 413
+AVKI +K + D + EI I L+H N++ +G E N L ++ S G L
Sbjct: 34 VAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFD 93
Query: 414 --EENLHGNKKDGNAFGWTERYKVAVGVAEALDYLHNSCEQPVIHKDVKSSNILLSDDFE 471
E ++ + D F +++ GV YLH + H+D+K N+LL +
Sbjct: 94 RIEPDIGMPEPDAQRFF----HQLMAGVV----YLHGIG---ITHRDIKPENLLLDERDN 142
Query: 472 PQLSDFGLASWLSTSSSHLTCTDVAGTFGYLAPEYFMHGKV-SEKIDVYAFGIVLLELLS 530
++SDFGLA+ ++ + GT Y+APE + +E +DV++ GIVL +L+
Sbjct: 143 LKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLA 202
Query: 531 GKKPINSENPKGQE 544
G+ P + + QE
Sbjct: 203 GELPWDQPSDSCQE 216
>pdb|2QOF|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f Mutant
Length = 373
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 60/212 (28%), Positives = 104/212 (49%), Gaps = 14/212 (6%)
Query: 331 SNFLPEYLVGKGGHSHVYRG--CLPDGKEL--AVKILKP--SEDVLKEFASEIEIITALH 384
+N + +VG G V G LP KE+ A+K LK +E ++F E I+
Sbjct: 45 TNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFD 104
Query: 385 HRNIISLFGFCFEDNNLLLVYDFLSRGSLEENLHGNKKDGNAFGWTERYKVAVGVAEALD 444
H NII L G + +++V +++ GSL+ L +K F + + G+A +
Sbjct: 105 HPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFL---RKHDAQFTVIQLVGMLRGIASGMK 161
Query: 445 YLHNSCEQPVIHKDVKSSNILLSDDFEPQLSDFGLASWLSTSSSHLTCTDVAGT-FGYLA 503
YL + +H+D+ + NIL++ + ++SDFGL+ L T + +
Sbjct: 162 YL---SDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTS 218
Query: 504 PEYFMHGKVSEKIDVYAFGIVLLELLS-GKKP 534
PE + K + DV+++GIVL E++S G++P
Sbjct: 219 PEAIAYRKFTSASDVWSYGIVLWEVMSYGERP 250
>pdb|2QOD|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y602f Mutant
Length = 373
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 60/212 (28%), Positives = 104/212 (49%), Gaps = 14/212 (6%)
Query: 331 SNFLPEYLVGKGGHSHVYRG--CLPDGKEL--AVKILKP--SEDVLKEFASEIEIITALH 384
+N + +VG G V G LP KE+ A+K LK +E ++F E I+
Sbjct: 45 TNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFD 104
Query: 385 HRNIISLFGFCFEDNNLLLVYDFLSRGSLEENLHGNKKDGNAFGWTERYKVAVGVAEALD 444
H NII L G + +++V +++ GSL+ L +K F + + G+A +
Sbjct: 105 HPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFL---RKHDAQFTVIQLVGMLRGIASGMK 161
Query: 445 YLHNSCEQPVIHKDVKSSNILLSDDFEPQLSDFGLASWLSTSSSHLTCTDVAGT-FGYLA 503
YL + +H+D+ + NIL++ + ++SDFGL+ L T + +
Sbjct: 162 YL---SDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTS 218
Query: 504 PEYFMHGKVSEKIDVYAFGIVLLELLS-GKKP 534
PE + K + DV+++GIVL E++S G++P
Sbjct: 219 PEAIAYRKFTSASDVWSYGIVLWEVMSYGERP 250
>pdb|2GHG|A Chain A, H-Chk1 Complexed With A431994
pdb|2YWP|A Chain A, Crystal Structure Of Chk1 With A Urea Inhibitor
pdb|2E9N|A Chain A, Structure Of H-chk1 Complexed With A767085
pdb|2E9O|A Chain A, Structure Of H-Chk1 Complexed With Aa582939
pdb|2E9P|A Chain A, Structure Of H-Chk1 Complexed With A771129
pdb|2E9U|A Chain A, Structure Of H-Chk1 Complexed With A780125
Length = 269
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 57/194 (29%), Positives = 95/194 (48%), Gaps = 18/194 (9%)
Query: 358 LAVKI--LKPSEDVLKEFASEIEIITALHHRNIISLFGFCFEDNNLLLVYDFLSRGSL-- 413
+AVKI +K + D + EI I L+H N++ +G E N L ++ S G L
Sbjct: 34 VAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFD 93
Query: 414 --EENLHGNKKDGNAFGWTERYKVAVGVAEALDYLHNSCEQPVIHKDVKSSNILLSDDFE 471
E ++ + D F +++ GV YLH + H+D+K N+LL +
Sbjct: 94 RIEPDIGMPEPDAQRFF----HQLMAGVV----YLHGIG---ITHRDIKPENLLLDERDN 142
Query: 472 PQLSDFGLASWLSTSSSHLTCTDVAGTFGYLAPEYFMHGKV-SEKIDVYAFGIVLLELLS 530
++SDFGLA+ ++ + GT Y+APE + +E +DV++ GIVL +L+
Sbjct: 143 LKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLA 202
Query: 531 GKKPINSENPKGQE 544
G+ P + + QE
Sbjct: 203 GELPWDQPSDSCQE 216
>pdb|3JVR|A Chain A, Characterization Of The Chk1 Allosteric Inhibitor Binding
Site
pdb|3JVS|A Chain A, Characterization Of The Chk1 Allosteric Inhibitor Binding
Site
Length = 271
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 57/194 (29%), Positives = 95/194 (48%), Gaps = 18/194 (9%)
Query: 358 LAVKI--LKPSEDVLKEFASEIEIITALHHRNIISLFGFCFEDNNLLLVYDFLSRGSL-- 413
+AVKI +K + D + EI I L+H N++ +G E N L ++ S G L
Sbjct: 34 VAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFD 93
Query: 414 --EENLHGNKKDGNAFGWTERYKVAVGVAEALDYLHNSCEQPVIHKDVKSSNILLSDDFE 471
E ++ + D F +++ GV YLH + H+D+K N+LL +
Sbjct: 94 RIEPDIGMPEPDAQRFF----HQLMAGVV----YLHGIG---ITHRDIKPENLLLDERDN 142
Query: 472 PQLSDFGLASWLSTSSSHLTCTDVAGTFGYLAPEYFMHGKV-SEKIDVYAFGIVLLELLS 530
++SDFGLA+ ++ + GT Y+APE + +E +DV++ GIVL +L+
Sbjct: 143 LKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLA 202
Query: 531 GKKPINSENPKGQE 544
G+ P + + QE
Sbjct: 203 GELPWDQPSDSCQE 216
>pdb|2QOI|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f:y602f
Double Mutant
Length = 373
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 60/212 (28%), Positives = 104/212 (49%), Gaps = 14/212 (6%)
Query: 331 SNFLPEYLVGKGGHSHVYRG--CLPDGKEL--AVKILKP--SEDVLKEFASEIEIITALH 384
+N + +VG G V G LP KE+ A+K LK +E ++F E I+
Sbjct: 45 TNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFD 104
Query: 385 HRNIISLFGFCFEDNNLLLVYDFLSRGSLEENLHGNKKDGNAFGWTERYKVAVGVAEALD 444
H NII L G + +++V +++ GSL+ L +K F + + G+A +
Sbjct: 105 HPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFL---RKHDAQFTVIQLVGMLRGIASGMK 161
Query: 445 YLHNSCEQPVIHKDVKSSNILLSDDFEPQLSDFGLASWLSTSSSHLTCTDVAGT-FGYLA 503
YL + +H+D+ + NIL++ + ++SDFGL+ L T + +
Sbjct: 162 YL---SDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTS 218
Query: 504 PEYFMHGKVSEKIDVYAFGIVLLELLS-GKKP 534
PE + K + DV+++GIVL E++S G++P
Sbjct: 219 PEAIAYRKFTSASDVWSYGIVLWEVMSYGERP 250
>pdb|2QOB|A Chain A, Human Epha3 Kinase Domain, Base Structure
Length = 344
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 65/227 (28%), Positives = 110/227 (48%), Gaps = 15/227 (6%)
Query: 316 STCRLFSYQELLSATSNFLPEYLVGKGGHSHVYRG--CLPDGKEL--AVKILKP--SEDV 369
ST + + + L AT N + +VG G V G LP KE+ A+K LK +E
Sbjct: 2 STQTVHEFAKELDAT-NISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQ 60
Query: 370 LKEFASEIEIITALHHRNIISLFGFCFEDNNLLLVYDFLSRGSLEENLHGNKKDGNAFGW 429
++F E I+ H NII L G + +++V + + GSL+ L +K F
Sbjct: 61 RRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEXMENGSLDSFL---RKHDAQFTV 117
Query: 430 TERYKVAVGVAEALDYLHNSCEQPVIHKDVKSSNILLSDDFEPQLSDFGLASWLSTSSSH 489
+ + G+A + YL + +H+D+ + NIL++ + ++SDFGL+ L
Sbjct: 118 IQLVGMLRGIASGMKYLS---DMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEA 174
Query: 490 LTCTDVAGT-FGYLAPEYFMHGKVSEKIDVYAFGIVLLELLS-GKKP 534
T + +PE + K + DV+++GIVL E++S G++P
Sbjct: 175 AYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERP 221
>pdb|1O6Y|A Chain A, Catalytic Domain Of Pknb Kinase From Mycobacterium
Tuberculosis
pdb|2FUM|A Chain A, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|B Chain B, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|C Chain C, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|D Chain D, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
Length = 299
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 60/215 (27%), Positives = 111/215 (51%), Gaps = 21/215 (9%)
Query: 338 LVGKGGHSHVYRGC-LPDGKELAVKILKPSEDVLKE------FASEIEIITALHHRNIIS 390
++G GG S V+ L +++AVK+L+ D+ ++ F E + AL+H I++
Sbjct: 36 ILGFGGMSEVHLARDLRLHRDVAVKVLR--ADLARDPSFYLRFRREAQNAAALNHPAIVA 93
Query: 391 LFGFCFEDNNL----LLVYDFLSRGSLEENLHGNKKDGNAFGWTERYKVAVGVAEALDYL 446
++ + +V +++ +L + +H T + + V +A+A L
Sbjct: 94 VYDTGEAETPAGPLPYIVMEYVDGVTLRDIVHTEGP------MTPKRAIEV-IADACQAL 146
Query: 447 HNSCEQPVIHKDVKSSNILLSDDFEPQLSDFGLASWLSTSSSHLTCTD-VAGTFGYLAPE 505
+ S + +IH+DVK +NI++S ++ DFG+A ++ S + +T T V GT YL+PE
Sbjct: 147 NFSHQNGIIHRDVKPANIMISATNAVKVMDFGIARAIADSGNSVTQTAAVIGTAQYLSPE 206
Query: 506 YFMHGKVSEKIDVYAFGIVLLELLSGKKPINSENP 540
V + DVY+ G VL E+L+G+ P ++P
Sbjct: 207 QARGDSVDARSDVYSLGCVLYEVLTGEPPFTGDSP 241
>pdb|2E9V|A Chain A, Structure Of H-Chk1 Complexed With A859017
pdb|2E9V|B Chain B, Structure Of H-Chk1 Complexed With A859017
Length = 268
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 57/194 (29%), Positives = 95/194 (48%), Gaps = 18/194 (9%)
Query: 358 LAVKI--LKPSEDVLKEFASEIEIITALHHRNIISLFGFCFEDNNLLLVYDFLSRGSL-- 413
+AVKI +K + D + EI I L+H N++ +G E N L ++ S G L
Sbjct: 34 VAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFD 93
Query: 414 --EENLHGNKKDGNAFGWTERYKVAVGVAEALDYLHNSCEQPVIHKDVKSSNILLSDDFE 471
E ++ + D F +++ GV YLH + H+D+K N+LL +
Sbjct: 94 RIEPDIGMPEPDAQRFF----HQLMAGVV----YLHGIG---ITHRDIKPENLLLDERDN 142
Query: 472 PQLSDFGLASWLSTSSSHLTCTDVAGTFGYLAPEYFMHGKV-SEKIDVYAFGIVLLELLS 530
++SDFGLA+ ++ + GT Y+APE + +E +DV++ GIVL +L+
Sbjct: 143 LKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLA 202
Query: 531 GKKPINSENPKGQE 544
G+ P + + QE
Sbjct: 203 GELPWDQPSDSCQE 216
>pdb|3IGO|A Chain A, Crystal Structure Of Cryptosporidium Parvum Cdpk1,
Cgd3_920
pdb|3MWU|A Chain A, Activated Calcium-Dependent Protein Kinase 1 From
Cryptosporidium Parvum (Cpcdpk1) In Complex With Bumped
Kinase Inhibitor Rm-1-95
pdb|3NCG|A Chain A, Activated Calcium-Dependent Protein Kinase 1 From
Cryptosporidium Parvum (Cpcdpk1) In Complex With Bumped
Kinase Inhibitor Nm-Pp1
Length = 486
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 58/210 (27%), Positives = 105/210 (50%), Gaps = 20/210 (9%)
Query: 338 LVGKGGHSHVYRGCLP--DGKELAVKILKPSEDVLKEFAS---EIEIITALHHRNIISLF 392
++GKG V + C +E AVK++ + K+ ++ E+E++ L H NI+ LF
Sbjct: 29 MLGKGSFGEVLK-CKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKLDHPNIMKLF 87
Query: 393 GFCFEDNNLLLVYDFLSRGSLEENLHGNKKDGNAFGWTERYKVAVGVAEALDYLHNSCEQ 452
+ ++ +V + + G L + + K+ F + ++ V + Y+H +
Sbjct: 88 EILEDSSSFYIVGELYTGGELFDEIIKRKR----FSEHDAARIIKQVFSGITYMH---KH 140
Query: 453 PVIHKDVKSSNILLSD---DFEPQLSDFGLASWLSTSSSHLTCTDVAGTFGYLAPEYFMH 509
++H+D+K NILL D + ++ DFGL++ ++ D GT Y+APE +
Sbjct: 141 NIVHRDLKPENILLESKEKDCDIKIIDFGLSTCFQQNTK---MKDRIGTAYYIAPE-VLR 196
Query: 510 GKVSEKIDVYAFGIVLLELLSGKKPINSEN 539
G EK DV++ G++L LLSG P +N
Sbjct: 197 GTYDEKCDVWSAGVILYILLSGTPPFYGKN 226
>pdb|2QOL|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596:y602:s768g Triple Mutant
Length = 373
Score = 73.9 bits (180), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 60/212 (28%), Positives = 103/212 (48%), Gaps = 14/212 (6%)
Query: 331 SNFLPEYLVGKGGHSHVYRG--CLPDGKEL--AVKILKP--SEDVLKEFASEIEIITALH 384
+N + +VG G V G LP KE+ A+K LK +E ++F E I+
Sbjct: 45 TNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFD 104
Query: 385 HRNIISLFGFCFEDNNLLLVYDFLSRGSLEENLHGNKKDGNAFGWTERYKVAVGVAEALD 444
H NII L G + +++V +++ GSL+ L +K F + + G+A +
Sbjct: 105 HPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFL---RKHDAQFTVIQLVGMLRGIASGMK 161
Query: 445 YLHNSCEQPVIHKDVKSSNILLSDDFEPQLSDFGLASWLSTSSSHLTCTDVAGT-FGYLA 503
YL + +H+D+ + NIL++ + ++SDFGL L T + +
Sbjct: 162 YL---SDMGYVHRDLAARNILINSNLVCKVSDFGLGRVLEDDPEAAYTTRGGKIPIRWTS 218
Query: 504 PEYFMHGKVSEKIDVYAFGIVLLELLS-GKKP 534
PE + K + DV+++GIVL E++S G++P
Sbjct: 219 PEAIAYRKFTSASDVWSYGIVLWEVMSYGERP 250
>pdb|3BYS|A Chain A, Co-Crystal Structure Of Lck And Aminopyrimidine Amide 10b
pdb|3BYU|A Chain A, Co-Crystal Structure Of Lck And Aminopyrimidine Reverse
Amide 23
Length = 277
Score = 73.9 bits (180), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 51/197 (25%), Positives = 99/197 (50%), Gaps = 8/197 (4%)
Query: 339 VGKGGHSHVYRGCLPDGKELAVKILKPSEDVLKEFASEIEIITALHHRNIISLFGFCFED 398
+G G V+ G ++AVK LK F +E ++ L H+ ++ L+ ++
Sbjct: 27 LGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDAFLAEANLMKQLQHQRLVRLYAVVTQE 86
Query: 399 NNLLLVYDFLSRGSLEENLHGNKKDGNAFGWTERYKVAVGVAEALDYLHNSCEQPVIHKD 458
+ ++ +++ GSL + L G + +A +AE + ++ E+ IH+D
Sbjct: 87 P-IYIITEYMENGSLVDFL--KTPSGIKLTINKLLDMAAQIAEGMAFIE---ERNYIHRD 140
Query: 459 VKSSNILLSDDFEPQLSDFGLASWLSTSSSHLTCTDVAGTFGYLAPEYFMHGKVSEKIDV 518
++++NIL+SD +++DFGLA L + + + APE +G + K DV
Sbjct: 141 LRAANILVSDTLSCKIADFGLAR-LIEDNEYTAREGAKFPIKWTAPEAINYGTFTIKSDV 199
Query: 519 YAFGIVLLELLS-GKKP 534
++FGI+L E+++ G+ P
Sbjct: 200 WSFGILLTEIVTHGRIP 216
>pdb|2OFV|A Chain A, Crystal Structure Of Aminoquinazoline 1 Bound To Lck
pdb|2OFV|B Chain B, Crystal Structure Of Aminoquinazoline 1 Bound To Lck
pdb|3B2W|A Chain A, Crystal Structure Of Pyrimidine Amide 11 Bound To Lck
Length = 277
Score = 73.9 bits (180), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 51/197 (25%), Positives = 99/197 (50%), Gaps = 8/197 (4%)
Query: 339 VGKGGHSHVYRGCLPDGKELAVKILKPSEDVLKEFASEIEIITALHHRNIISLFGFCFED 398
+G G V+ G ++AVK LK F +E ++ L H+ ++ L+ ++
Sbjct: 26 LGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDAFLAEANLMKQLQHQRLVRLYAVVTQE 85
Query: 399 NNLLLVYDFLSRGSLEENLHGNKKDGNAFGWTERYKVAVGVAEALDYLHNSCEQPVIHKD 458
+ ++ +++ GSL + L G + +A +AE + ++ E+ IH+D
Sbjct: 86 P-IYIITEYMENGSLVDFL--KTPSGIKLTINKLLDMAAQIAEGMAFIE---ERNYIHRD 139
Query: 459 VKSSNILLSDDFEPQLSDFGLASWLSTSSSHLTCTDVAGTFGYLAPEYFMHGKVSEKIDV 518
++++NIL+SD +++DFGLA L + + + APE +G + K DV
Sbjct: 140 LRAANILVSDTLSCKIADFGLAR-LIEDNEYTAREGAKFPIKWTAPEAINYGTFTIKSDV 198
Query: 519 YAFGIVLLELLS-GKKP 534
++FGI+L E+++ G+ P
Sbjct: 199 WSFGILLTEIVTHGRIP 215
>pdb|2AYP|A Chain A, Crystal Structure Of Chk1 With An Indol Inhibitor
Length = 269
Score = 73.9 bits (180), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 57/194 (29%), Positives = 95/194 (48%), Gaps = 18/194 (9%)
Query: 358 LAVKI--LKPSEDVLKEFASEIEIITALHHRNIISLFGFCFEDNNLLLVYDFLSRGSL-- 413
+AVKI +K + D + EI I L+H N++ +G E N L ++ S G L
Sbjct: 35 VAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFD 94
Query: 414 --EENLHGNKKDGNAFGWTERYKVAVGVAEALDYLHNSCEQPVIHKDVKSSNILLSDDFE 471
E ++ + D F +++ GV YLH + H+D+K N+LL +
Sbjct: 95 RIEPDIGMPEPDAQRFF----HQLMAGVV----YLHGIG---ITHRDIKPENLLLDERDN 143
Query: 472 PQLSDFGLASWLSTSSSHLTCTDVAGTFGYLAPEYFMHGKV-SEKIDVYAFGIVLLELLS 530
++SDFGLA+ ++ + GT Y+APE + +E +DV++ GIVL +L+
Sbjct: 144 LKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLA 203
Query: 531 GKKPINSENPKGQE 544
G+ P + + QE
Sbjct: 204 GELPWDQPSDSCQE 217
>pdb|2PL0|A Chain A, Lck Bound To Imatinib
Length = 289
Score = 73.9 bits (180), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 51/197 (25%), Positives = 99/197 (50%), Gaps = 8/197 (4%)
Query: 339 VGKGGHSHVYRGCLPDGKELAVKILKPSEDVLKEFASEIEIITALHHRNIISLFGFCFED 398
+G G V+ G ++AVK LK F +E ++ L H+ ++ L+ ++
Sbjct: 31 LGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDAFLAEANLMKQLQHQRLVRLYAVVTQE 90
Query: 399 NNLLLVYDFLSRGSLEENLHGNKKDGNAFGWTERYKVAVGVAEALDYLHNSCEQPVIHKD 458
+ ++ +++ GSL + L G + +A +AE + ++ E+ IH+D
Sbjct: 91 P-IYIITEYMENGSLVDFL--KTPSGIKLTINKLLDMAAQIAEGMAFIE---ERNYIHRD 144
Query: 459 VKSSNILLSDDFEPQLSDFGLASWLSTSSSHLTCTDVAGTFGYLAPEYFMHGKVSEKIDV 518
++++NIL+SD +++DFGLA L + + + APE +G + K DV
Sbjct: 145 LRAANILVSDTLSCKIADFGLAR-LIEDNEYTAREGAKFPIKWTAPEAINYGTFTIKSDV 203
Query: 519 YAFGIVLLELLS-GKKP 534
++FGI+L E+++ G+ P
Sbjct: 204 WSFGILLTEIVTHGRIP 220
>pdb|4FST|A Chain A, Crystal Structure Of The Chk1
Length = 269
Score = 73.9 bits (180), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 57/194 (29%), Positives = 95/194 (48%), Gaps = 18/194 (9%)
Query: 358 LAVKI--LKPSEDVLKEFASEIEIITALHHRNIISLFGFCFEDNNLLLVYDFLSRGSL-- 413
+AVKI +K + D + EI I L+H N++ +G E N L ++ S G L
Sbjct: 34 VAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFD 93
Query: 414 --EENLHGNKKDGNAFGWTERYKVAVGVAEALDYLHNSCEQPVIHKDVKSSNILLSDDFE 471
E ++ + D F +++ GV YLH + H+D+K N+LL +
Sbjct: 94 RIEPDIGMPEPDAQRFF----HQLMAGVV----YLHGIG---ITHRDIKPENLLLDERDN 142
Query: 472 PQLSDFGLASWLSTSSSHLTCTDVAGTFGYLAPEYFMHGKV-SEKIDVYAFGIVLLELLS 530
++SDFGLA+ ++ + GT Y+APE + +E +DV++ GIVL +L+
Sbjct: 143 LKISDFGLATVFRYNNRERLLNKMXGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLA 202
Query: 531 GKKPINSENPKGQE 544
G+ P + + QE
Sbjct: 203 GELPWDQPSDSCQE 216
>pdb|3GGF|A Chain A, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
Mst4 In Complex With An Quinazolin
pdb|3GGF|B Chain B, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
Mst4 In Complex With An Quinazolin
Length = 301
Score = 73.9 bits (180), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 55/208 (26%), Positives = 108/208 (51%), Gaps = 19/208 (9%)
Query: 339 VGKGGHSHVYRGCLPDGKEL-AVKI--LKPSEDVLKEFASEIEIITALHHRNIISLFGFC 395
+GKG V++G +++ A+KI L+ +ED +++ EI +++ + +G
Sbjct: 31 IGKGSFGEVFKGIDNRTQQVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSSYVTKYYGSY 90
Query: 396 FEDNNLLLVYDFLSRGSLEENLHGNKKDGNAFGWTERYKVAVGVAE---ALDYLHNSCEQ 452
+ + L ++ ++L GS + L G + +++A + E LDYLH+ +
Sbjct: 91 LKGSKLWIIMEYLGGGSALDLLRA--------GPFDEFQIATMLKEILKGLDYLHSEKK- 141
Query: 453 PVIHKDVKSSNILLSDDFEPQLSDFGLASWLSTSSSHLTCTDVAGTFGYLAPEYFMHGKV 512
IH+D+K++N+LLS+ + +L+DFG+A L + + + GT ++APE
Sbjct: 142 --IHRDIKAANVLLSEQGDVKLADFGVAGQL--TDTQIKRNTFVGTPFWMAPEVIQQSAY 197
Query: 513 SEKIDVYAFGIVLLELLSGKKPINSENP 540
K D+++ GI +EL G+ P + +P
Sbjct: 198 DSKADIWSLGITAIELAKGEPPNSDMHP 225
>pdb|2OF2|A Chain A, Crystal Structure Of Furanopyrimidine 8 Bound To Lck
pdb|2OF4|A Chain A, Crystal Structure Of Furanopyrimidine 1 Bound To Lck
Length = 271
Score = 73.9 bits (180), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 51/197 (25%), Positives = 99/197 (50%), Gaps = 8/197 (4%)
Query: 339 VGKGGHSHVYRGCLPDGKELAVKILKPSEDVLKEFASEIEIITALHHRNIISLFGFCFED 398
+G G V+ G ++AVK LK F +E ++ L H+ ++ L+ ++
Sbjct: 21 LGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDAFLAEANLMKQLQHQRLVRLYAVVTQE 80
Query: 399 NNLLLVYDFLSRGSLEENLHGNKKDGNAFGWTERYKVAVGVAEALDYLHNSCEQPVIHKD 458
+ ++ +++ GSL + L G + +A +AE + ++ E+ IH+D
Sbjct: 81 P-IYIITEYMENGSLVDFL--KTPSGIKLTINKLLDMAAQIAEGMAFIE---ERNYIHRD 134
Query: 459 VKSSNILLSDDFEPQLSDFGLASWLSTSSSHLTCTDVAGTFGYLAPEYFMHGKVSEKIDV 518
++++NIL+SD +++DFGLA L + + + APE +G + K DV
Sbjct: 135 LRAANILVSDTLSCKIADFGLAR-LIEDNEYTAREGAKFPIKWTAPEAINYGTFTIKSDV 193
Query: 519 YAFGIVLLELLS-GKKP 534
++FGI+L E+++ G+ P
Sbjct: 194 WSFGILLTEIVTHGRIP 210
>pdb|4EWH|B Chain B, Co-Crystal Structure Of Ack1 With Inhibitor
pdb|4EWH|A Chain A, Co-Crystal Structure Of Ack1 With Inhibitor
Length = 275
Score = 73.9 bits (180), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 64/207 (30%), Positives = 98/207 (47%), Gaps = 19/207 (9%)
Query: 339 VGKGGHSHVYRGCL--PDGK--ELAVKILKP----SEDVLKEFASEIEIITALHHRNIIS 390
+G G V RG P GK +AVK LKP + + +F E+ + +L HRN+I
Sbjct: 16 LGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIR 75
Query: 391 LFGFCFEDNNLLLVYDFLSRGSLEENLHGNKKDGN-AFGWTERYKVAVGVAEALDYLHNS 449
L+G + +V + GSL + L K G+ G RY AV VAE + YL +
Sbjct: 76 LYGVVLTPP-MKMVTELAPLGSLLDRL--RKHQGHFLLGTLSRY--AVQVAEGMGYLES- 129
Query: 450 CEQPVIHKDVKSSNILLSDDFEPQLSDFGLASWLSTSSSHLTCTDVAGT-FGYLAPEYFM 508
+ IH+D+ + N+LL+ ++ DFGL L + H + F + APE
Sbjct: 130 --KRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHXVMQEHRKVPFAWCAPESLK 187
Query: 509 HGKVSEKIDVYAFGIVLLELLS-GKKP 534
S D + FG+ L E+ + G++P
Sbjct: 188 TRTFSHASDTWMFGVTLWEMFTYGQEP 214
>pdb|3EQP|B Chain B, Crystal Structure Of Ack1 With Compound T95
pdb|3EQP|A Chain A, Crystal Structure Of Ack1 With Compound T95
pdb|3EQR|A Chain A, Crystal Structure Of Ack1 With Compound T74
pdb|3EQR|B Chain B, Crystal Structure Of Ack1 With Compound T74
Length = 276
Score = 73.6 bits (179), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 64/207 (30%), Positives = 98/207 (47%), Gaps = 19/207 (9%)
Query: 339 VGKGGHSHVYRGCL--PDGK--ELAVKILKP----SEDVLKEFASEIEIITALHHRNIIS 390
+G G V RG P GK +AVK LKP + + +F E+ + +L HRN+I
Sbjct: 16 LGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIR 75
Query: 391 LFGFCFEDNNLLLVYDFLSRGSLEENLHGNKKDGN-AFGWTERYKVAVGVAEALDYLHNS 449
L+G + +V + GSL + L K G+ G RY AV VAE + YL +
Sbjct: 76 LYGVVLTPP-MKMVTELAPLGSLLDRL--RKHQGHFLLGTLSRY--AVQVAEGMGYLES- 129
Query: 450 CEQPVIHKDVKSSNILLSDDFEPQLSDFGLASWLSTSSSHLTCTDVAGT-FGYLAPEYFM 508
+ IH+D+ + N+LL+ ++ DFGL L + H + F + APE
Sbjct: 130 --KRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRKVPFAWCAPESLK 187
Query: 509 HGKVSEKIDVYAFGIVLLELLS-GKKP 534
S D + FG+ L E+ + G++P
Sbjct: 188 TRTFSHASDTWMFGVTLWEMFTYGQEP 214
>pdb|4HZR|A Chain A, Crystal Structure Of Ack1 Kinase Domain
pdb|4HZR|B Chain B, Crystal Structure Of Ack1 Kinase Domain
Length = 277
Score = 73.6 bits (179), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 64/207 (30%), Positives = 98/207 (47%), Gaps = 19/207 (9%)
Query: 339 VGKGGHSHVYRGCL--PDGK--ELAVKILKP----SEDVLKEFASEIEIITALHHRNIIS 390
+G G V RG P GK +AVK LKP + + +F E+ + +L HRN+I
Sbjct: 20 LGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIR 79
Query: 391 LFGFCFEDNNLLLVYDFLSRGSLEENLHGNKKDGN-AFGWTERYKVAVGVAEALDYLHNS 449
L+G + +V + GSL + L K G+ G RY AV VAE + YL +
Sbjct: 80 LYGVVLTPP-MKMVTELAPLGSLLDRL--RKHQGHFLLGTLSRY--AVQVAEGMGYLES- 133
Query: 450 CEQPVIHKDVKSSNILLSDDFEPQLSDFGLASWLSTSSSHLTCTDVAGT-FGYLAPEYFM 508
+ IH+D+ + N+LL+ ++ DFGL L + H + F + APE
Sbjct: 134 --KRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRKVPFAWCAPESLK 191
Query: 509 HGKVSEKIDVYAFGIVLLELLS-GKKP 534
S D + FG+ L E+ + G++P
Sbjct: 192 TRTFSHASDTWMFGVTLWEMFTYGQEP 218
>pdb|1U54|A Chain A, Crystal Structures Of The Phosphorylated And
Unphosphorylated Kinase Domains Of The Cdc42-Associated
Tyrosine Kinase Ack1 Bound To Amp-Pcp
Length = 291
Score = 73.6 bits (179), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 64/207 (30%), Positives = 98/207 (47%), Gaps = 19/207 (9%)
Query: 339 VGKGGHSHVYRGCL--PDGK--ELAVKILKP----SEDVLKEFASEIEIITALHHRNIIS 390
+G G V RG P GK +AVK LKP + + +F E+ + +L HRN+I
Sbjct: 26 LGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIR 85
Query: 391 LFGFCFEDNNLLLVYDFLSRGSLEENLHGNKKDGN-AFGWTERYKVAVGVAEALDYLHNS 449
L+G + +V + GSL + L K G+ G RY AV VAE + YL +
Sbjct: 86 LYGVVLTPP-MKMVTELAPLGSLLDRL--RKHQGHFLLGTLSRY--AVQVAEGMGYLES- 139
Query: 450 CEQPVIHKDVKSSNILLSDDFEPQLSDFGLASWLSTSSSHLTCTDVAGT-FGYLAPEYFM 508
+ IH+D+ + N+LL+ ++ DFGL L + H + F + APE
Sbjct: 140 --KRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHXVMQEHRKVPFAWCAPESLK 197
Query: 509 HGKVSEKIDVYAFGIVLLELLS-GKKP 534
S D + FG+ L E+ + G++P
Sbjct: 198 TRTFSHASDTWMFGVTLWEMFTYGQEP 224
>pdb|2R2P|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 5 (Epha5)
Length = 295
Score = 73.6 bits (179), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 59/207 (28%), Positives = 102/207 (49%), Gaps = 14/207 (6%)
Query: 336 EYLVGKGGHSHVYRG--CLPDGKEL--AVKILKP--SEDVLKEFASEIEIITALHHRNII 389
E ++G G V G LP +EL A+K LK +E ++F E I+ H NII
Sbjct: 27 ERVIGAGEFGEVCSGRLKLPGKRELPVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNII 86
Query: 390 SLFGFCFEDNNLLLVYDFLSRGSLEENLHGNKKDGNAFGWTERYKVAVGVAEALDYLHNS 449
L G + +++V +++ GSL+ L KK+ F + + G++ + YL +
Sbjct: 87 HLEGVVTKSKPVMIVTEYMENGSLDTFL---KKNDGQFTVIQLVGMLRGISAGMKYLSD- 142
Query: 450 CEQPVIHKDVKSSNILLSDDFEPQLSDFGLASWLSTSSSHLTCTDVAGT-FGYLAPEYFM 508
+H+D+ + NIL++ + ++SDFGL+ L T + APE
Sbjct: 143 --MGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTAPEAIA 200
Query: 509 HGKVSEKIDVYAFGIVLLELLS-GKKP 534
K + DV+++GIV+ E++S G++P
Sbjct: 201 FRKFTSASDVWSYGIVMWEVVSYGERP 227
>pdb|2XIK|A Chain A, Structure Of Human Ysk1 (Yeast Sps1-Ste20-Related Kinase
1)
Length = 294
Score = 73.6 bits (179), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 58/205 (28%), Positives = 103/205 (50%), Gaps = 13/205 (6%)
Query: 339 VGKGGHSHVYRGCLPDGKEL-AVKI--LKPSEDVLKEFASEIEIITALHHRNIISLFGFC 395
+GKG VY+G KE+ A+KI L+ +ED +++ EI +++ I FG
Sbjct: 27 IGKGSFGEVYKGIDNHTKEVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYITRYFGSY 86
Query: 396 FEDNNLLLVYDFLSRGSLEENLHGNKKDGNAFGWTERYKVAVGVAEALDYLHNSCEQPVI 455
+ L ++ ++L GS + L + R + + LDYLH+ + I
Sbjct: 87 LKSTKLWIIMEYLGGGSALDLLKPGPLEETYIATILR-----EILKGLDYLHSERK---I 138
Query: 456 HKDVKSSNILLSDDFEPQLSDFGLASWLSTSSSHLTCTDVAGTFGYLAPEYFMHGKVSEK 515
H+D+K++N+LLS+ + +L+DFG+A L + + + GT ++APE K
Sbjct: 139 HRDIKAANVLLSEQGDVKLADFGVAGQL--TDTQIKRNXFVGTPFWMAPEVIKQSAYDFK 196
Query: 516 IDVYAFGIVLLELLSGKKPINSENP 540
D+++ GI +EL G+ P + +P
Sbjct: 197 ADIWSLGITAIELAKGEPPNSDLHP 221
>pdb|1U46|A Chain A, Crystal Structure Of The Unphosphorylated Kinase Domain Of
The Tyrosine Kinase Ack1
pdb|1U46|B Chain B, Crystal Structure Of The Unphosphorylated Kinase Domain Of
The Tyrosine Kinase Ack1
pdb|1U4D|A Chain A, Structure Of The Ack1 Kinase Domain Bound To
Debromohymenialdisine
pdb|1U4D|B Chain B, Structure Of The Ack1 Kinase Domain Bound To
Debromohymenialdisine
pdb|1U54|B Chain B, Crystal Structures Of The Phosphorylated And
Unphosphorylated Kinase Domains Of The Cdc42-Associated
Tyrosine Kinase Ack1 Bound To Amp-Pcp
Length = 291
Score = 73.6 bits (179), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 64/207 (30%), Positives = 98/207 (47%), Gaps = 19/207 (9%)
Query: 339 VGKGGHSHVYRGCL--PDGK--ELAVKILKP----SEDVLKEFASEIEIITALHHRNIIS 390
+G G V RG P GK +AVK LKP + + +F E+ + +L HRN+I
Sbjct: 26 LGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIR 85
Query: 391 LFGFCFEDNNLLLVYDFLSRGSLEENLHGNKKDGN-AFGWTERYKVAVGVAEALDYLHNS 449
L+G + +V + GSL + L K G+ G RY AV VAE + YL +
Sbjct: 86 LYGVVLTPP-MKMVTELAPLGSLLDRL--RKHQGHFLLGTLSRY--AVQVAEGMGYLES- 139
Query: 450 CEQPVIHKDVKSSNILLSDDFEPQLSDFGLASWLSTSSSHLTCTDVAGT-FGYLAPEYFM 508
+ IH+D+ + N+LL+ ++ DFGL L + H + F + APE
Sbjct: 140 --KRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRKVPFAWCAPESLK 197
Query: 509 HGKVSEKIDVYAFGIVLLELLS-GKKP 534
S D + FG+ L E+ + G++P
Sbjct: 198 TRTFSHASDTWMFGVTLWEMFTYGQEP 224
>pdb|2VN9|A Chain A, Crystal Structure Of Human Calcium Calmodulin Dependent
Protein Kinase Ii Delta Isoform 1, Camkd
pdb|2VN9|B Chain B, Crystal Structure Of Human Calcium Calmodulin Dependent
Protein Kinase Ii Delta Isoform 1, Camkd
Length = 301
Score = 73.6 bits (179), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 61/209 (29%), Positives = 98/209 (46%), Gaps = 18/209 (8%)
Query: 339 VGKGGHSHVYRGCL--PDGKELAVKIL---KPSEDVLKEFASEIEIITALHHRNIISLFG 393
+GKG S V R C+ P G+E A KI+ K S ++ E I L H NI+ L
Sbjct: 12 LGKGAFS-VVRRCMKIPTGQEYAAKIINTKKLSARDHQKLEREARICRLLKHPNIVRLHD 70
Query: 394 FCFEDNNLLLVYDFLSRGSLEENLHGNKKDGNAFGWTERYKVAVGVAEALDYLHNSCEQP 453
E+ LV+D ++ G L E++ + A + + + L+ +++
Sbjct: 71 SISEEGFHYLVFDLVTGGELFEDIVAREYYSEA-------DASHCIQQILESVNHCHLNG 123
Query: 454 VIHKDVKSSNILL---SDDFEPQLSDFGLASWLSTSSSHLTCTDVAGTFGYLAPEYFMHG 510
++H+D+K N+LL S +L+DFGLA + AGT GYL+PE
Sbjct: 124 IVHRDLKPENLLLASKSKGAAVKLADFGLA--IEVQGDQQAWFGFAGTPGYLSPEVLRKD 181
Query: 511 KVSEKIDVYAFGIVLLELLSGKKPINSEN 539
+ +D++A G++L LL G P E+
Sbjct: 182 PYGKPVDMWACGVILYILLVGYPPFWDED 210
>pdb|2WEL|A Chain A, Crystal Structure Of Su6656-Bound CalciumCALMODULIN-
Dependent Protein Kinase Ii Delta In Complex With
Calmodulin
Length = 327
Score = 73.6 bits (179), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 61/209 (29%), Positives = 98/209 (46%), Gaps = 18/209 (8%)
Query: 339 VGKGGHSHVYRGCL--PDGKELAVKIL---KPSEDVLKEFASEIEIITALHHRNIISLFG 393
+GKG S V R C+ P G+E A KI+ K S ++ E I L H NI+ L
Sbjct: 12 LGKGAFS-VVRRCMKIPTGQEYAAKIINTKKLSARDHQKLEREARICRLLKHPNIVRLHD 70
Query: 394 FCFEDNNLLLVYDFLSRGSLEENLHGNKKDGNAFGWTERYKVAVGVAEALDYLHNSCEQP 453
E+ LV+D ++ G L E++ + A + + + L+ +++
Sbjct: 71 SISEEGFHYLVFDLVTGGELFEDIVAREYYSEA-------DASHCIQQILESVNHCHLNG 123
Query: 454 VIHKDVKSSNILL---SDDFEPQLSDFGLASWLSTSSSHLTCTDVAGTFGYLAPEYFMHG 510
++H+D+K N+LL S +L+DFGLA + AGT GYL+PE
Sbjct: 124 IVHRDLKPENLLLASKSKGAAVKLADFGLA--IEVQGDQQAWFGFAGTPGYLSPEVLRKD 181
Query: 511 KVSEKIDVYAFGIVLLELLSGKKPINSEN 539
+ +D++A G++L LL G P E+
Sbjct: 182 PYGKPVDMWACGVILYILLVGYPPFWDED 210
>pdb|2R4B|A Chain A, Erbb4 Kinase Domain Complexed With A Thienopyrimidine
Inhibitor
pdb|2R4B|B Chain B, Erbb4 Kinase Domain Complexed With A Thienopyrimidine
Inhibitor
Length = 321
Score = 73.6 bits (179), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 55/210 (26%), Positives = 102/210 (48%), Gaps = 19/210 (9%)
Query: 338 LVGKGGHSHVYRGC-LPDGK----ELAVKILK----PSEDVLKEFASEIEIITALHHRNI 388
++G G VY+G +P+G+ +A+KIL P +V EF E I+ ++ H ++
Sbjct: 45 VLGSGAFGTVYKGIWVPEGETVKIPVAIKILNETTGPKANV--EFMDEALIMASMDHPHL 102
Query: 389 ISLFGFCFEDNNLLLVYDFLSRGSLEENLHGNKKDGNAFGWTERYKVAVGVAEALDYLHN 448
+ L G C + LV + G L E +H +K + G V +A+ + YL
Sbjct: 103 VRLLGVCLSPT-IQLVTQLMPHGCLLEYVHEHKDN---IGSQLLLNWCVQIAKGMMYLE- 157
Query: 449 SCEQPVIHKDVKSSNILLSDDFEPQLSDFGLASWLSTSSSHLTCTDVAGTFGYLAPEYFM 508
E+ ++H+D+ + N+L+ +++DFGLA L ++A E
Sbjct: 158 --ERRLVHRDLAARNVLVKSPNHVKITDFGLARLLEGDEKEYNADGGKMPIKWMALECIH 215
Query: 509 HGKVSEKIDVYAFGIVLLELLS-GKKPINS 537
+ K + + DV+++G+ + EL++ G KP +
Sbjct: 216 YRKFTHQSDVWSYGVTIWELMTFGGKPYDG 245
>pdb|3Q5I|A Chain A, Crystal Structure Of Pbanka_031420
Length = 504
Score = 73.6 bits (179), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 65/222 (29%), Positives = 102/222 (45%), Gaps = 31/222 (13%)
Query: 339 VGKGGHSHVYRGCLPDGK-ELAVKILKPS--------------EDVLKEFASEIEIITAL 383
+G G + V +G E A+K++K S E +E +EI ++ +L
Sbjct: 44 LGSGAYGEVLLCKEKNGHSEKAIKVIKKSQFDKGRYSDDNKNIEKFHEEIYNEISLLKSL 103
Query: 384 HHRNIISLFGFCFEDNN-LLLVYDFLSRGSLEENLHGNKKDGNAFGWTERYKVAVGVAEA 442
H NII LF FED LV +F G L E + K F + + +
Sbjct: 104 DHPNIIKLFD-VFEDKKYFYLVTEFYEGGELFEQIINRHK----FDECDAANIMKQILSG 158
Query: 443 LDYLHNSCEQPVIHKDVKSSNILLSDD---FEPQLSDFGLASWLSTSSSHLTCTDVAGTF 499
+ YLH + ++H+D+K NILL + ++ DFGL+S+ S D GT
Sbjct: 159 ICYLH---KHNIVHRDIKPENILLENKNSLLNIKIVDFGLSSFFSKD---YKLRDRLGTA 212
Query: 500 GYLAPEYFMHGKVSEKIDVYAFGIVLLELLSGKKPINSENPK 541
Y+APE + K +EK DV++ G+++ LL G P +N +
Sbjct: 213 YYIAPE-VLKKKYNEKCDVWSCGVIMYILLCGYPPFGGQNDQ 253
>pdb|2OG8|A Chain A, Crystal Structure Of Aminoquinazoline 36 Bound To Lck
pdb|2OG8|B Chain B, Crystal Structure Of Aminoquinazoline 36 Bound To Lck
Length = 265
Score = 73.6 bits (179), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 51/197 (25%), Positives = 99/197 (50%), Gaps = 8/197 (4%)
Query: 339 VGKGGHSHVYRGCLPDGKELAVKILKPSEDVLKEFASEIEIITALHHRNIISLFGFCFED 398
+G G V+ G ++AVK LK F +E ++ L H+ ++ L+ ++
Sbjct: 16 LGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDAFLAEANLMKQLQHQRLVRLYAVVTQE 75
Query: 399 NNLLLVYDFLSRGSLEENLHGNKKDGNAFGWTERYKVAVGVAEALDYLHNSCEQPVIHKD 458
+ ++ +++ GSL + L G + +A +AE + ++ E+ IH+D
Sbjct: 76 P-IYIITEYMENGSLVDFL--KTPSGIKLTINKLLDMAAQIAEGMAFIE---ERNYIHRD 129
Query: 459 VKSSNILLSDDFEPQLSDFGLASWLSTSSSHLTCTDVAGTFGYLAPEYFMHGKVSEKIDV 518
++++NIL+SD +++DFGLA L + + + APE +G + K DV
Sbjct: 130 LRAANILVSDTLSCKIADFGLAR-LIEDNEYTAREGAKFPIKWTAPEAINYGTFTIKSDV 188
Query: 519 YAFGIVLLELLS-GKKP 534
++FGI+L E+++ G+ P
Sbjct: 189 WSFGILLTEIVTHGRIP 205
>pdb|2QKR|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510
With Indirubin 3'-Monoxime Bound
Length = 313
Score = 73.2 bits (178), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 53/198 (26%), Positives = 99/198 (50%), Gaps = 13/198 (6%)
Query: 339 VGKGGHSHVYRGCLPDGKELAVKILK---PSEDVLKEFASEIEIITALHHRNIISLFGFC 395
VG+G + VY+ G+ +A+K ++ E + EI ++ LHH NI+SL
Sbjct: 29 VGEGTYGVVYKAKDSQGRIVALKRIRLDAEDEGIPSTAIREISLLKELHHPNIVSLIDVI 88
Query: 396 FEDNNLLLVYDFLSRGSLEENLHGNKKDGNAFGWTERYKVAVGVAEALDYLHNSCEQPVI 455
+ L LV++F+ + L++ L NK + ++ + + + L + + + ++
Sbjct: 89 HSERCLTLVFEFMEK-DLKKVLDENKTG------LQDSQIKIYLYQLLRGVAHCHQHRIL 141
Query: 456 HKDVKSSNILLSDDFEPQLSDFGLASWLSTSSSHLTCTDVAGTFGYLAPEYFMHG-KVSE 514
H+D+K N+L++ D +L+DFGLA T V T Y AP+ M K S
Sbjct: 142 HRDLKPQNLLINSDGALKLADFGLARAFGIPVRSYTHEVV--TLWYRAPDVLMGSKKYST 199
Query: 515 KIDVYAFGIVLLELLSGK 532
+D+++ G + E+++GK
Sbjct: 200 SVDIWSIGCIFAEMITGK 217
>pdb|4ID7|A Chain A, Ack1 Kinase In Complex With The Inhibitor
Cis-3-[8-amino-1-(4-
Phenoxyphenyl)imidazo[1,5-a]pyrazin-3-yl]cyclobutanol
Length = 273
Score = 73.2 bits (178), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 64/207 (30%), Positives = 98/207 (47%), Gaps = 19/207 (9%)
Query: 339 VGKGGHSHVYRGCL--PDGK--ELAVKILKP----SEDVLKEFASEIEIITALHHRNIIS 390
+G G V RG P GK +AVK LKP + + +F E+ + +L HRN+I
Sbjct: 16 LGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIR 75
Query: 391 LFGFCFEDNNLLLVYDFLSRGSLEENLHGNKKDGN-AFGWTERYKVAVGVAEALDYLHNS 449
L+G + +V + GSL + L K G+ G RY AV VAE + YL +
Sbjct: 76 LYGVVLTPP-MKMVTELAPLGSLLDRL--RKHQGHFLLGTLSRY--AVQVAEGMGYLES- 129
Query: 450 CEQPVIHKDVKSSNILLSDDFEPQLSDFGLASWLSTSSSHLTCTDVAGT-FGYLAPEYFM 508
+ IH+D+ + N+LL+ ++ DFGL L + H + F + APE
Sbjct: 130 --KRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRKVPFAWCAPESLK 187
Query: 509 HGKVSEKIDVYAFGIVLLELLS-GKKP 534
S D + FG+ L E+ + G++P
Sbjct: 188 TRTFSHASDTWMFGVTLWEMFTYGQEP 214
>pdb|3NIZ|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510
With Adp Bound
Length = 311
Score = 73.2 bits (178), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 53/198 (26%), Positives = 99/198 (50%), Gaps = 13/198 (6%)
Query: 339 VGKGGHSHVYRGCLPDGKELAVKILK---PSEDVLKEFASEIEIITALHHRNIISLFGFC 395
VG+G + VY+ G+ +A+K ++ E + EI ++ LHH NI+SL
Sbjct: 29 VGEGTYGVVYKAKDSQGRIVALKRIRLDAEDEGIPSTAIREISLLKELHHPNIVSLIDVI 88
Query: 396 FEDNNLLLVYDFLSRGSLEENLHGNKKDGNAFGWTERYKVAVGVAEALDYLHNSCEQPVI 455
+ L LV++F+ + L++ L NK + ++ + + + L + + + ++
Sbjct: 89 HSERCLTLVFEFMEK-DLKKVLDENKTG------LQDSQIKIYLYQLLRGVAHCHQHRIL 141
Query: 456 HKDVKSSNILLSDDFEPQLSDFGLASWLSTSSSHLTCTDVAGTFGYLAPEYFMHG-KVSE 514
H+D+K N+L++ D +L+DFGLA T V T Y AP+ M K S
Sbjct: 142 HRDLKPQNLLINSDGALKLADFGLARAFGIPVRSYTHEVV--TLWYRAPDVLMGSKKYST 199
Query: 515 KIDVYAFGIVLLELLSGK 532
+D+++ G + E+++GK
Sbjct: 200 SVDIWSIGCIFAEMITGK 217
>pdb|3DFA|A Chain A, Crystal Structure Of Kinase Domain Of Calcium-dependent
Protein Kinase Cgd3_920 From Cryptosporidium Parvum
Length = 286
Score = 73.2 bits (178), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 58/210 (27%), Positives = 105/210 (50%), Gaps = 20/210 (9%)
Query: 338 LVGKGGHSHVYRGCLP--DGKELAVKILKPSEDVLKEFAS---EIEIITALHHRNIISLF 392
++GKG V + C +E AVK++ + K+ ++ E+E++ L H NI+ LF
Sbjct: 29 MLGKGSFGEVLK-CKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKLDHPNIMKLF 87
Query: 393 GFCFEDNNLLLVYDFLSRGSLEENLHGNKKDGNAFGWTERYKVAVGVAEALDYLHNSCEQ 452
+ ++ +V + + G L + + K+ F + ++ V + Y+H +
Sbjct: 88 EILEDSSSFYIVGELYTGGELFDEIIKRKR----FSEHDAARIIKQVFSGITYMH---KH 140
Query: 453 PVIHKDVKSSNILLSD---DFEPQLSDFGLASWLSTSSSHLTCTDVAGTFGYLAPEYFMH 509
++H+D+K NILL D + ++ DFGL++ ++ D GT Y+APE +
Sbjct: 141 NIVHRDLKPENILLESKEKDCDIKIIDFGLSTCFQQNTK---MKDRIGTAYYIAPE-VLR 196
Query: 510 GKVSEKIDVYAFGIVLLELLSGKKPINSEN 539
G EK DV++ G++L LLSG P +N
Sbjct: 197 GTYDEKCDVWSAGVILYILLSGTPPFYGKN 226
>pdb|3BBT|B Chain B, Crystal Structure Of The Erbb4 Kinase In Complex With
Lapatinib
pdb|3BBT|D Chain D, Crystal Structure Of The Erbb4 Kinase In Complex With
Lapatinib
pdb|3BBW|B Chain B, Crystal Structure Of The Erbb4 Kinase In Its Inactive
Conformation
pdb|3BBW|A Chain A, Crystal Structure Of The Erbb4 Kinase In Its Inactive
Conformation
pdb|3BCE|A Chain A, Crystal Structure Of The Erbb4 Kinase
pdb|3BCE|B Chain B, Crystal Structure Of The Erbb4 Kinase
pdb|3BCE|C Chain C, Crystal Structure Of The Erbb4 Kinase
Length = 328
Score = 73.2 bits (178), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 55/210 (26%), Positives = 102/210 (48%), Gaps = 19/210 (9%)
Query: 338 LVGKGGHSHVYRGC-LPDGK----ELAVKILK----PSEDVLKEFASEIEIITALHHRNI 388
++G G VY+G +P+G+ +A+KIL P +V EF E I+ ++ H ++
Sbjct: 22 VLGSGAFGTVYKGIWVPEGETVKIPVAIKILNETTGPKANV--EFMDEALIMASMDHPHL 79
Query: 389 ISLFGFCFEDNNLLLVYDFLSRGSLEENLHGNKKDGNAFGWTERYKVAVGVAEALDYLHN 448
+ L G C + LV + G L E +H +K + G V +A+ + YL
Sbjct: 80 VRLLGVCLSPT-IQLVTQLMPHGCLLEYVHEHKDN---IGSQLLLNWCVQIAKGMMYLE- 134
Query: 449 SCEQPVIHKDVKSSNILLSDDFEPQLSDFGLASWLSTSSSHLTCTDVAGTFGYLAPEYFM 508
E+ ++H+D+ + N+L+ +++DFGLA L ++A E
Sbjct: 135 --ERRLVHRDLAARNVLVKSPNHVKITDFGLARLLEGDEKEYNADGGKMPIKWMALECIH 192
Query: 509 HGKVSEKIDVYAFGIVLLELLS-GKKPINS 537
+ K + + DV+++G+ + EL++ G KP +
Sbjct: 193 YRKFTHQSDVWSYGVTIWELMTFGGKPYDG 222
>pdb|2WEI|A Chain A, Crystal Structure Of The Kinase Domain Of Cryptosporidium
Parvum Calcium Dependent Protein Kinase In Complex With
3- Mb-Pp1
Length = 287
Score = 73.2 bits (178), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 58/210 (27%), Positives = 105/210 (50%), Gaps = 20/210 (9%)
Query: 338 LVGKGGHSHVYRGCLP--DGKELAVKILKPSEDVLKEFAS---EIEIITALHHRNIISLF 392
++GKG V + C +E AVK++ + K+ ++ E+E++ L H NI+ LF
Sbjct: 29 MLGKGSFGEVLK-CKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKLDHPNIMKLF 87
Query: 393 GFCFEDNNLLLVYDFLSRGSLEENLHGNKKDGNAFGWTERYKVAVGVAEALDYLHNSCEQ 452
+ ++ +V + + G L + + K+ F + ++ V + Y+H +
Sbjct: 88 EILEDSSSFYIVGELYTGGELFDEIIKRKR----FSEHDAARIIKQVFSGITYMH---KH 140
Query: 453 PVIHKDVKSSNILLSD---DFEPQLSDFGLASWLSTSSSHLTCTDVAGTFGYLAPEYFMH 509
++H+D+K NILL D + ++ DFGL++ ++ D GT Y+APE +
Sbjct: 141 NIVHRDLKPENILLESKEKDCDIKIIDFGLSTCFQQNTK---MKDRIGTAYYIAPE-VLR 196
Query: 510 GKVSEKIDVYAFGIVLLELLSGKKPINSEN 539
G EK DV++ G++L LLSG P +N
Sbjct: 197 GTYDEKCDVWSAGVILYILLSGTPPFYGKN 226
>pdb|2ZM1|A Chain A, Crystal Structure Of Imidazo Pyrazin 1 Bound To The Kinase
Domain Of Human Lck, (Auto-Phosphorylated On Tyr394)
pdb|2ZM4|A Chain A, Crystal Structure Of Imidazo Quinoxaline 1 Bound To The
Kinase Domain Of Human Lck, Activated Form (Auto-
Phosphorylated On Tyr394)
pdb|2ZYB|A Chain A, Crystal Structure Of Phenylimidazo Pyrazin 2 Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AC1|A Chain A, Crystal Structure Of Pyrazin Derivative Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AC2|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC3|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC4|A Chain A, Crystal Structure Of Triazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC5|A Chain A, Crystal Structure Of Triazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC8|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3ACJ|A Chain A, Crystal Structure Of Imidazo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3ACK|A Chain A, Crystal Structure Of Pyrrolo Pyrazine Derivative Bound To
The Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AD4|A Chain A, Crystal Structure Of Methoxy Benzofuran Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AD5|A Chain A, Crystal Structure Of Triazolone Derivative Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AD6|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
Length = 285
Score = 72.8 bits (177), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 51/197 (25%), Positives = 98/197 (49%), Gaps = 8/197 (4%)
Query: 339 VGKGGHSHVYRGCLPDGKELAVKILKPSEDVLKEFASEIEIITALHHRNIISLFGFCFED 398
+G G V+ G ++AVK LK F +E ++ L H+ ++ L+ ++
Sbjct: 27 LGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDAFLAEANLMKQLQHQRLVRLYAVVTQE 86
Query: 399 NNLLLVYDFLSRGSLEENLHGNKKDGNAFGWTERYKVAVGVAEALDYLHNSCEQPVIHKD 458
+ ++ +++ GSL + L G + +A +AE + ++ E+ IH+D
Sbjct: 87 P-IYIITEYMENGSLVDFL--KTPSGIKLTINKLLDMAAQIAEGMAFIE---ERNYIHRD 140
Query: 459 VKSSNILLSDDFEPQLSDFGLASWLSTSSSHLTCTDVAGTFGYLAPEYFMHGKVSEKIDV 518
++++NIL+SD +++DFGLA L + + APE +G + K DV
Sbjct: 141 LRAANILVSDTLSCKIADFGLAR-LIEDNEXTAREGAKFPIKWTAPEAINYGTFTIKSDV 199
Query: 519 YAFGIVLLELLS-GKKP 534
++FGI+L E+++ G+ P
Sbjct: 200 WSFGILLTEIVTHGRIP 216
>pdb|3KXZ|A Chain A, The Complex Crystal Structure Of Lck With A Probe Molecule
W259
Length = 287
Score = 72.8 bits (177), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 51/197 (25%), Positives = 98/197 (49%), Gaps = 8/197 (4%)
Query: 339 VGKGGHSHVYRGCLPDGKELAVKILKPSEDVLKEFASEIEIITALHHRNIISLFGFCFED 398
+G G V+ G ++AVK LK F +E ++ L H+ ++ L+ ++
Sbjct: 29 LGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDAFLAEANLMKQLQHQRLVRLYAVVTQE 88
Query: 399 NNLLLVYDFLSRGSLEENLHGNKKDGNAFGWTERYKVAVGVAEALDYLHNSCEQPVIHKD 458
+ ++ +++ GSL + L G + +A +AE + ++ E+ IH+D
Sbjct: 89 P-IYIITEYMENGSLVDFL--KTPSGIKLTINKLLDMAAQIAEGMAFIE---ERNYIHRD 142
Query: 459 VKSSNILLSDDFEPQLSDFGLASWLSTSSSHLTCTDVAGTFGYLAPEYFMHGKVSEKIDV 518
++++NIL+SD +++DFGLA L + + APE +G + K DV
Sbjct: 143 LRAANILVSDTLSCKIADFGLAR-LIEDNEXTAREGAKFPIKWTAPEAINYGTFTIKSDV 201
Query: 519 YAFGIVLLELLS-GKKP 534
++FGI+L E+++ G+ P
Sbjct: 202 WSFGILLTEIVTHGRIP 218
>pdb|2QON|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:y742a Triple Mutant
Length = 373
Score = 72.8 bits (177), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 60/212 (28%), Positives = 103/212 (48%), Gaps = 14/212 (6%)
Query: 331 SNFLPEYLVGKGGHSHVYRG--CLPDGKEL--AVKILKP--SEDVLKEFASEIEIITALH 384
+N + +VG G V G LP KE+ A+K LK +E ++F E I+
Sbjct: 45 TNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFD 104
Query: 385 HRNIISLFGFCFEDNNLLLVYDFLSRGSLEENLHGNKKDGNAFGWTERYKVAVGVAEALD 444
H NII L G + +++V + + GSL+ L +K F + + G+A +
Sbjct: 105 HPNIIRLEGVVTKSKPVMIVTEXMENGSLDSFL---RKHDAQFTVIQLVGMLRGIASGMK 161
Query: 445 YLHNSCEQPVIHKDVKSSNILLSDDFEPQLSDFGLASWLSTSSSHLTCTDVAGT-FGYLA 503
YL + +H+D+ + NIL++ + ++SDFGL+ L T + +
Sbjct: 162 YL---SDMGAVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTS 218
Query: 504 PEYFMHGKVSEKIDVYAFGIVLLELLS-GKKP 534
PE + K + DV+++GIVL E++S G++P
Sbjct: 219 PEAIAYRKFTSASDVWSYGIVLWEVMSYGERP 250
>pdb|1QPD|A Chain A, Structural Analysis Of The Lymphocyte-specific Kinase Lck
In Complex With Non-selective And Src Family Selective
Kinase Inhibitors
Length = 279
Score = 72.8 bits (177), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 51/197 (25%), Positives = 98/197 (49%), Gaps = 8/197 (4%)
Query: 339 VGKGGHSHVYRGCLPDGKELAVKILKPSEDVLKEFASEIEIITALHHRNIISLFGFCFED 398
+G G V+ G ++AVK LK F +E ++ L H+ ++ L+ ++
Sbjct: 21 LGAGQAGEVWMGYYNGHTKVAVKSLKQGSMSPDAFLAEANLMKQLQHQRLVRLYAVVTQE 80
Query: 399 NNLLLVYDFLSRGSLEENLHGNKKDGNAFGWTERYKVAVGVAEALDYLHNSCEQPVIHKD 458
+ ++ +++ GSL + L G + +A +AE + ++ E+ IH+D
Sbjct: 81 P-IYIITEYMENGSLVDFL--KTPSGIKLTINKLLDMAAQIAEGMAFIE---ERNYIHRD 134
Query: 459 VKSSNILLSDDFEPQLSDFGLASWLSTSSSHLTCTDVAGTFGYLAPEYFMHGKVSEKIDV 518
++++NIL+SD +++DFGLA L + + APE +G + K DV
Sbjct: 135 LRAANILVSDTLSCKIADFGLAR-LIEDAEXTAREGAKFPIKWTAPEAINYGTFTIKSDV 193
Query: 519 YAFGIVLLELLS-GKKP 534
++FGI+L E+++ G+ P
Sbjct: 194 WSFGILLTEIVTHGRIP 210
>pdb|3KK9|A Chain A, Camkii Substrate Complex B
Length = 282
Score = 72.8 bits (177), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 62/209 (29%), Positives = 103/209 (49%), Gaps = 19/209 (9%)
Query: 339 VGKGGHSHVYRGCL--PDGKELAVKIL---KPSEDVLKEFASEIEIITALHHRNIISLFG 393
+GKG S V R C+ G E A KI+ K S ++ E I L H NI+ L
Sbjct: 13 LGKGAFS-VVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLHD 71
Query: 394 FCFEDNNLLLVYDFLSRGSLEENLHGNKKDGNAFGWTERYKVAVGVAEALDYLHNSCEQP 453
E++ LV+D ++ G L E++ + A + + E++ Y H++
Sbjct: 72 SIQEESFHYLVFDLVTGGELFEDIVAREFYSEA----DASHCIQQILESIAYCHSN---G 124
Query: 454 VIHKDVKSSNILLSDDFEP---QLSDFGLASWLSTSSSHLTCTDVAGTFGYLAPEYFMHG 510
++H+++K N+LL+ + +L+DFGLA ++ S + AGT GYL+PE
Sbjct: 125 IVHRNLKPENLLLASKAKGAAVKLADFGLAIEVNDSEA---WHGFAGTPGYLSPEVLKKD 181
Query: 511 KVSEKIDVYAFGIVLLELLSGKKPINSEN 539
S+ +D++A G++L LL G P E+
Sbjct: 182 PYSKPVDIWACGVILYILLVGYPPFWDED 210
>pdb|2OFU|A Chain A, X-Ray Crystal Structure Of 2-Aminopyrimidine Carbamate 43
Bound To Lck
Length = 273
Score = 72.8 bits (177), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 51/197 (25%), Positives = 98/197 (49%), Gaps = 8/197 (4%)
Query: 339 VGKGGHSHVYRGCLPDGKELAVKILKPSEDVLKEFASEIEIITALHHRNIISLFGFCFED 398
+G G V+ G ++AVK LK F +E ++ L H+ ++ L+ ++
Sbjct: 23 LGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDAFLAEANLMKQLQHQRLVRLYAVVTQE 82
Query: 399 NNLLLVYDFLSRGSLEENLHGNKKDGNAFGWTERYKVAVGVAEALDYLHNSCEQPVIHKD 458
+ ++ +++ GSL + L G + +A +AE + ++ E+ IH+D
Sbjct: 83 P-IYIITEYMENGSLVDFL--KTPSGIKLTINKLLDMAAQIAEGMAFIE---ERNYIHRD 136
Query: 459 VKSSNILLSDDFEPQLSDFGLASWLSTSSSHLTCTDVAGTFGYLAPEYFMHGKVSEKIDV 518
++++NIL+SD +++DFGLA L + + APE +G + K DV
Sbjct: 137 LRAANILVSDTLSCKIADFGLAR-LIEDNEXTAREGAKFPIKWTAPEAINYGTFTIKSDV 195
Query: 519 YAFGIVLLELLS-GKKP 534
++FGI+L E+++ G+ P
Sbjct: 196 WSFGILLTEIVTHGRIP 212
>pdb|2HEL|A Chain A, Crystal Structure Of A Mutant Epha4 Kinase Domain (Y742a)
Length = 306
Score = 72.8 bits (177), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 57/207 (27%), Positives = 103/207 (49%), Gaps = 14/207 (6%)
Query: 336 EYLVGKGGHSHVYRGCL--PDGKEL--AVKILKP--SEDVLKEFASEIEIITALHHRNII 389
E ++G G V G L P +E+ A+K LK ++ ++F SE I+ H NII
Sbjct: 34 EKVIGVGEFGEVCSGRLKVPGKREICVAIKTLKAGYTDKQRRDFLSEASIMGQFDHPNII 93
Query: 390 SLFGFCFEDNNLLLVYDFLSRGSLEENLHGNKKDGNAFGWTERYKVAVGVAEALDYLHNS 449
L G + ++++ +++ GSL+ L N DG F + + G+ + YL
Sbjct: 94 HLEGVVTKCKPVMIITEYMENGSLDAFLRKN--DGR-FTVIQLVGMLRGIGSGMKYLS-- 148
Query: 450 CEQPVIHKDVKSSNILLSDDFEPQLSDFGLASWLSTSSSHLTCTDVAGT-FGYLAPEYFM 508
+ +H+D+ + NIL++ + ++SDFG++ L T + APE
Sbjct: 149 -DMSAVHRDLAARNILVNSNLVCKVSDFGMSRVLEDDPEAAYTTRGGKIPIRWTAPEAIA 207
Query: 509 HGKVSEKIDVYAFGIVLLELLS-GKKP 534
+ K + DV+++GIV+ E++S G++P
Sbjct: 208 YRKFTSASDVWSYGIVMWEVMSYGERP 234
>pdb|3KK8|A Chain A, Camkii Substrate Complex A
Length = 284
Score = 72.8 bits (177), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 62/209 (29%), Positives = 103/209 (49%), Gaps = 19/209 (9%)
Query: 339 VGKGGHSHVYRGCL--PDGKELAVKIL---KPSEDVLKEFASEIEIITALHHRNIISLFG 393
+GKG S V R C+ G E A KI+ K S ++ E I L H NI+ L
Sbjct: 14 LGKGAFS-VVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLHD 72
Query: 394 FCFEDNNLLLVYDFLSRGSLEENLHGNKKDGNAFGWTERYKVAVGVAEALDYLHNSCEQP 453
E++ LV+D ++ G L E++ + A + + E++ Y H++
Sbjct: 73 SIQEESFHYLVFDLVTGGELFEDIVAREFYSEA----DASHCIQQILESIAYCHSN---G 125
Query: 454 VIHKDVKSSNILLSDDFEP---QLSDFGLASWLSTSSSHLTCTDVAGTFGYLAPEYFMHG 510
++H+++K N+LL+ + +L+DFGLA ++ S + AGT GYL+PE
Sbjct: 126 IVHRNLKPENLLLASKAKGAAVKLADFGLAIEVNDSEA---WHGFAGTPGYLSPEVLKKD 182
Query: 511 KVSEKIDVYAFGIVLLELLSGKKPINSEN 539
S+ +D++A G++L LL G P E+
Sbjct: 183 PYSKPVDIWACGVILYILLVGYPPFWDED 211
>pdb|3BYM|A Chain A, X-Ray Co-Crystal Structure Aminobenzimidazole Triazine 1
Bound To Lck
Length = 272
Score = 72.8 bits (177), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 51/197 (25%), Positives = 98/197 (49%), Gaps = 8/197 (4%)
Query: 339 VGKGGHSHVYRGCLPDGKELAVKILKPSEDVLKEFASEIEIITALHHRNIISLFGFCFED 398
+G G V+ G ++AVK LK F +E ++ L H+ ++ L+ ++
Sbjct: 22 LGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDAFLAEANLMKQLQHQRLVRLYAVVTQE 81
Query: 399 NNLLLVYDFLSRGSLEENLHGNKKDGNAFGWTERYKVAVGVAEALDYLHNSCEQPVIHKD 458
+ ++ +++ GSL + L G + +A +AE + ++ E+ IH+D
Sbjct: 82 P-IYIITEYMENGSLVDFL--KTPSGIKLTINKLLDMAAQIAEGMAFIE---ERNYIHRD 135
Query: 459 VKSSNILLSDDFEPQLSDFGLASWLSTSSSHLTCTDVAGTFGYLAPEYFMHGKVSEKIDV 518
++++NIL+SD +++DFGLA L + + APE +G + K DV
Sbjct: 136 LRAANILVSDTLSCKIADFGLAR-LIEDNEXTAREGAKFPIKWTAPEAINYGTFTIKSDV 194
Query: 519 YAFGIVLLELLS-GKKP 534
++FGI+L E+++ G+ P
Sbjct: 195 WSFGILLTEIVTHGRIP 211
>pdb|2REI|A Chain A, Kinase Domain Of Human Ephrin Type-a Receptor 7 (epha7)
pdb|3DKO|A Chain A, Complex Between The Kinase Domain Of Human Ephrin Type-A
Receptor 7 (Epha7) And Inhibitor Alw-Ii-49-7
Length = 318
Score = 72.8 bits (177), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 56/207 (27%), Positives = 103/207 (49%), Gaps = 14/207 (6%)
Query: 336 EYLVGKGGHSHVYRG--CLPDGKELAVKI----LKPSEDVLKEFASEIEIITALHHRNII 389
E ++G G V G LP +++AV I + +E ++F E I+ H N++
Sbjct: 48 ERVIGAGEFGEVCSGRLKLPGKRDVAVAIKTLKVGYTEKQRRDFLCEASIMGQFDHPNVV 107
Query: 390 SLFGFCFEDNNLLLVYDFLSRGSLEENLHGNKKDGNAFGWTERYKVAVGVAEALDYLHNS 449
L G +++V +F+ G+L+ L K DG F + + G+A + YL
Sbjct: 108 HLEGVVTRGKPVMIVIEFMENGALDAFL--RKHDGQ-FTVIQLVGMLRGIAAGMRYL--- 161
Query: 450 CEQPVIHKDVKSSNILLSDDFEPQLSDFGLASWLSTSSSHL-TCTDVAGTFGYLAPEYFM 508
+ +H+D+ + NIL++ + ++SDFGL+ + + T T + APE
Sbjct: 162 ADMGYVHRDLAARNILVNSNLVCKVSDFGLSRVIEDDPEAVYTTTGGKIPVRWTAPEAIQ 221
Query: 509 HGKVSEKIDVYAFGIVLLELLS-GKKP 534
+ K + DV+++GIV+ E++S G++P
Sbjct: 222 YRKFTSASDVWSYGIVMWEVMSYGERP 248
>pdb|2UV2|A Chain A, Crystal Structure Of Human Ste20-Like Kinase Bound To
4-(4-(
5-Cyclopropyl-1h-Pyrazol-3-Ylamino)-Quinazolin-2-
Ylamino)- Phenyl)-Acetonitrile
Length = 287
Score = 72.8 bits (177), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 50/180 (27%), Positives = 98/180 (54%), Gaps = 12/180 (6%)
Query: 366 SEDVLKEFASEIEIITALHHRNIISLFGFCFEDNNLLLVYDFLSRGSLEENLHGNKKDGN 425
SE+ L+++ EI+I+ + H NI+ L + +NNL ++ +F + G+++ + ++
Sbjct: 47 SEEELEDYMVEIDILASCDHPNIVKLLDAFYYENNLWILIEFCAGGAVDAVMLELER--- 103
Query: 426 AFGWTERYKVAVGVAEALDYLHNSCEQPVIHKDVKSSNILLSDDFEPQLSDFGLASWLST 485
++ V +AL+YLH++ +IH+D+K+ NIL + D + +L+DFG+++ +T
Sbjct: 104 PLTESQIQVVCKQTLDALNYLHDN---KIIHRDLKAGNILFTLDGDIKLADFGVSA-KNT 159
Query: 486 SSSHLTCTDVAGTFGYLAPEYFMHGKVSE-----KIDVYAFGIVLLELLSGKKPINSENP 540
+ GT ++APE M + K DV++ GI L+E+ + P + NP
Sbjct: 160 RTXIQRRDSFIGTPYWMAPEVVMCETSKDRPYDYKADVWSLGITLIEMAEIEPPHHELNP 219
>pdb|1QPE|A Chain A, Structural Analysis Of The Lymphocyte-Specific Kinase Lck
In Complex With Non-Selective And Src Family Selective
Kinase Inhibitors
pdb|1QPJ|A Chain A, Crystal Structure Of The Lymphocyte-Specific Kinase Lck In
Complex With Staurosporine.
pdb|1QPC|A Chain A, Structural Analysis Of The Lymphocyte-Specific Kinase Lck
In Complex With Non-Selective And Src Family Selective
Kinase Inhibitors
Length = 279
Score = 72.4 bits (176), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 51/197 (25%), Positives = 98/197 (49%), Gaps = 8/197 (4%)
Query: 339 VGKGGHSHVYRGCLPDGKELAVKILKPSEDVLKEFASEIEIITALHHRNIISLFGFCFED 398
+G G V+ G ++AVK LK F +E ++ L H+ ++ L+ ++
Sbjct: 21 LGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDAFLAEANLMKQLQHQRLVRLYAVVTQE 80
Query: 399 NNLLLVYDFLSRGSLEENLHGNKKDGNAFGWTERYKVAVGVAEALDYLHNSCEQPVIHKD 458
+ ++ +++ GSL + L G + +A +AE + ++ E+ IH+D
Sbjct: 81 P-IYIITEYMENGSLVDFL--KTPSGIKLTINKLLDMAAQIAEGMAFIE---ERNYIHRD 134
Query: 459 VKSSNILLSDDFEPQLSDFGLASWLSTSSSHLTCTDVAGTFGYLAPEYFMHGKVSEKIDV 518
++++NIL+SD +++DFGLA L + + APE +G + K DV
Sbjct: 135 LRAANILVSDTLSCKIADFGLAR-LIEDNEXTAREGAKFPIKWTAPEAINYGTFTIKSDV 193
Query: 519 YAFGIVLLELLS-GKKP 534
++FGI+L E+++ G+ P
Sbjct: 194 WSFGILLTEIVTHGRIP 210
>pdb|3LCK|A Chain A, The Kinase Domain Of Human Lymphocyte Kinase (Lck),
Activated Form (Auto-Phosphorylated On Tyr394)
pdb|3BYO|A Chain A, X-Ray Co-Crystal Structure Of 2-Amino-6-Phenylpyrimido[5',
4':5,6]pyrimido[1,2-A]benzimidazol-5(6h)-One 25 Bound To
Lck
Length = 271
Score = 72.4 bits (176), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 51/197 (25%), Positives = 98/197 (49%), Gaps = 8/197 (4%)
Query: 339 VGKGGHSHVYRGCLPDGKELAVKILKPSEDVLKEFASEIEIITALHHRNIISLFGFCFED 398
+G G V+ G ++AVK LK F +E ++ L H+ ++ L+ ++
Sbjct: 21 LGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDAFLAEANLMKQLQHQRLVRLYAVVTQE 80
Query: 399 NNLLLVYDFLSRGSLEENLHGNKKDGNAFGWTERYKVAVGVAEALDYLHNSCEQPVIHKD 458
+ ++ +++ GSL + L G + +A +AE + ++ E+ IH+D
Sbjct: 81 P-IYIITEYMENGSLVDFL--KTPSGIKLTINKLLDMAAQIAEGMAFIE---ERNYIHRD 134
Query: 459 VKSSNILLSDDFEPQLSDFGLASWLSTSSSHLTCTDVAGTFGYLAPEYFMHGKVSEKIDV 518
++++NIL+SD +++DFGLA L + + APE +G + K DV
Sbjct: 135 LRAANILVSDTLSCKIADFGLAR-LIEDNEXTAREGAKFPIKWTAPEAINYGTFTIKSDV 193
Query: 519 YAFGIVLLELLS-GKKP 534
++FGI+L E+++ G+ P
Sbjct: 194 WSFGILLTEIVTHGRIP 210
>pdb|3KMM|A Chain A, Structure Of Human Lck Kinase With A Small Molecule
Inhibitor
Length = 288
Score = 72.4 bits (176), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 51/197 (25%), Positives = 98/197 (49%), Gaps = 8/197 (4%)
Query: 339 VGKGGHSHVYRGCLPDGKELAVKILKPSEDVLKEFASEIEIITALHHRNIISLFGFCFED 398
+G G V+ G ++AVK LK F +E ++ L H+ ++ L+ ++
Sbjct: 30 LGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDAFLAEANLMKQLQHQRLVRLYAVVTQE 89
Query: 399 NNLLLVYDFLSRGSLEENLHGNKKDGNAFGWTERYKVAVGVAEALDYLHNSCEQPVIHKD 458
+ ++ +++ GSL + L G + +A +AE + ++ E+ IH+D
Sbjct: 90 P-IYIITEYMENGSLVDFL--KTPSGIKLTINKLLDMAAQIAEGMAFIE---ERNYIHRD 143
Query: 459 VKSSNILLSDDFEPQLSDFGLASWLSTSSSHLTCTDVAGTFGYLAPEYFMHGKVSEKIDV 518
++++NIL+SD +++DFGLA L + + APE +G + K DV
Sbjct: 144 LRAANILVSDTLSCKIADFGLAR-LIEDNEXTAREGAKFPIKWTAPEAINYGTFTIKSDV 202
Query: 519 YAFGIVLLELLS-GKKP 534
++FGI+L E+++ G+ P
Sbjct: 203 WSFGILLTEIVTHGRIP 219
>pdb|2QO7|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Dephosphorylated, Amp-Pnp Bound
pdb|2QOQ|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Base, Amp-Pnp
Bound Structure
Length = 373
Score = 72.4 bits (176), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 60/212 (28%), Positives = 103/212 (48%), Gaps = 14/212 (6%)
Query: 331 SNFLPEYLVGKGGHSHVYRG--CLPDGKEL--AVKILKP--SEDVLKEFASEIEIITALH 384
+N + +VG G V G LP KE+ A+K LK +E ++F E I+
Sbjct: 45 TNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFD 104
Query: 385 HRNIISLFGFCFEDNNLLLVYDFLSRGSLEENLHGNKKDGNAFGWTERYKVAVGVAEALD 444
H NII L G + +++V + + GSL+ L +K F + + G+A +
Sbjct: 105 HPNIIRLEGVVTKSKPVMIVTEXMENGSLDSFL---RKHDAQFTVIQLVGMLRGIASGMK 161
Query: 445 YLHNSCEQPVIHKDVKSSNILLSDDFEPQLSDFGLASWLSTSSSHLTCTDVAGT-FGYLA 503
YL + +H+D+ + NIL++ + ++SDFGL+ L T + +
Sbjct: 162 YL---SDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTS 218
Query: 504 PEYFMHGKVSEKIDVYAFGIVLLELLS-GKKP 534
PE + K + DV+++GIVL E++S G++P
Sbjct: 219 PEAIAYRKFTSASDVWSYGIVLWEVMSYGERP 250
>pdb|3KL8|A Chain A, Camkiintide Inhibitor Complex
pdb|3KL8|C Chain C, Camkiintide Inhibitor Complex
pdb|3KL8|E Chain E, Camkiintide Inhibitor Complex
pdb|3KL8|G Chain G, Camkiintide Inhibitor Complex
pdb|3KL8|I Chain I, Camkiintide Inhibitor Complex
Length = 269
Score = 72.4 bits (176), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 62/209 (29%), Positives = 103/209 (49%), Gaps = 19/209 (9%)
Query: 339 VGKGGHSHVYRGCL--PDGKELAVKIL---KPSEDVLKEFASEIEIITALHHRNIISLFG 393
+GKG S V R C+ G E A KI+ K S ++ E I L H NI+ L
Sbjct: 14 LGKGAFS-VVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLHD 72
Query: 394 FCFEDNNLLLVYDFLSRGSLEENLHGNKKDGNAFGWTERYKVAVGVAEALDYLHNSCEQP 453
E++ LV+D ++ G L E++ + A + + E++ Y H++
Sbjct: 73 SIQEESFHYLVFDLVTGGELFEDIVAREFYSEA----DASHCIQQILESIAYCHSN---G 125
Query: 454 VIHKDVKSSNILLSDDFEP---QLSDFGLASWLSTSSSHLTCTDVAGTFGYLAPEYFMHG 510
++H+++K N+LL+ + +L+DFGLA ++ S + AGT GYL+PE
Sbjct: 126 IVHRNLKPENLLLASKAKGAAVKLADFGLAIEVNDSEA---WHGFAGTPGYLSPEVLKKD 182
Query: 511 KVSEKIDVYAFGIVLLELLSGKKPINSEN 539
S+ +D++A G++L LL G P E+
Sbjct: 183 PYSKPVDIWACGVILYILLVGYPPFWDED 211
>pdb|2Y6M|A Chain A, Crystal Structure Of Epha4 Kinase Domain
pdb|2Y6O|A Chain A, Crystal Structure Of Epha4 Kinase Domain In Complex With
Dasatinib
Length = 291
Score = 72.4 bits (176), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 57/207 (27%), Positives = 103/207 (49%), Gaps = 14/207 (6%)
Query: 336 EYLVGKGGHSHVYRGCL--PDGKEL--AVKILKP--SEDVLKEFASEIEIITALHHRNII 389
E ++G G V G L P +E+ A+K LK ++ ++F SE I+ H NII
Sbjct: 19 EKVIGVGEFGEVCSGRLKVPGKREICVAIKTLKAGYTDKQRRDFLSEASIMGQFDHPNII 78
Query: 390 SLFGFCFEDNNLLLVYDFLSRGSLEENLHGNKKDGNAFGWTERYKVAVGVAEALDYLHNS 449
L G + ++++ +++ GSL+ L N DG F + + G+ + YL
Sbjct: 79 HLEGVVTKCKPVMIITEYMENGSLDAFLRKN--DGR-FTVIQLVGMLRGIGSGMKYLS-- 133
Query: 450 CEQPVIHKDVKSSNILLSDDFEPQLSDFGLASWLSTSSSHLTCTDVAGT-FGYLAPEYFM 508
+ +H+D+ + NIL++ + ++SDFG++ L T + APE
Sbjct: 134 -DMSYVHRDLAARNILVNSNLVCKVSDFGMSRVLEDDPEAAYTTRGGKIPIRWTAPEAIA 192
Query: 509 HGKVSEKIDVYAFGIVLLELLS-GKKP 534
+ K + DV+++GIV+ E++S G++P
Sbjct: 193 YRKFTSASDVWSYGIVMWEVMSYGERP 219
>pdb|3BHH|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|C Chain C, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|D Chain D, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
Length = 295
Score = 72.4 bits (176), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 63/209 (30%), Positives = 97/209 (46%), Gaps = 18/209 (8%)
Query: 339 VGKGGHSHVYRGC--LPDGKELAVKIL---KPSEDVLKEFASEIEIITALHHRNIISLFG 393
+GKG S V R C L G E A KI+ K S ++ E I L H NI+ L
Sbjct: 12 IGKGAFS-VVRRCVKLCTGHEYAAKIINTKKLSARDHQKLEREARICRLLKHSNIVRLHD 70
Query: 394 FCFEDNNLLLVYDFLSRGSLEENLHGNKKDGNAFGWTERYKVAVGVAEALDYLHNSCEQP 453
E+ LV+D ++ G L E++ + A + + EA+ + H +
Sbjct: 71 SISEEGFHYLVFDLVTGGELFEDIVAREYYSEA----DASHCIQQILEAVLHCH---QMG 123
Query: 454 VIHKDVKSSNILLSDDFEP---QLSDFGLASWLSTSSSHLTCTDVAGTFGYLAPEYFMHG 510
V+H+D+K N+LL+ + +L+DFGLA + AGT GYL+PE
Sbjct: 124 VVHRDLKPENLLLASKCKGAAVKLADFGLA--IEVQGDQQAWFGFAGTPGYLSPEVLRKE 181
Query: 511 KVSEKIDVYAFGIVLLELLSGKKPINSEN 539
+ +D++A G++L LL G P E+
Sbjct: 182 AYGKPVDIWACGVILYILLVGYPPFWDED 210
>pdb|2PK9|A Chain A, Structure Of The Pho85-pho80 Cdk-cyclin Complex Of The
Phosphate-responsive Signal Transduction Pathway
pdb|2PK9|C Chain C, Structure Of The Pho85-pho80 Cdk-cyclin Complex Of The
Phosphate-responsive Signal Transduction Pathway
pdb|2PMI|A Chain A, Structure Of The Pho85-Pho80 Cdk-Cyclin Complex Of The
Phosphate- Responsive Signal Transduction Pathway With
Bound Atp-Gamma-S
pdb|2PMI|C Chain C, Structure Of The Pho85-Pho80 Cdk-Cyclin Complex Of The
Phosphate- Responsive Signal Transduction Pathway With
Bound Atp-Gamma-S
Length = 317
Score = 72.4 bits (176), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 59/229 (25%), Positives = 108/229 (47%), Gaps = 14/229 (6%)
Query: 327 LSATSNFLPEYLVGKGGHSHVYRGC-LPDGKELAVKILK--PSEDVLKEFASEIEIITAL 383
+S++S F +G G ++ VY+G G +A+K +K E EI ++ L
Sbjct: 1 MSSSSQFKQLEKLGNGTYATVYKGLNKTTGVYVALKEVKLDSEEGTPSTAIREISLMKEL 60
Query: 384 HHRNIISLFGFCFEDNNLLLVYDFLS---RGSLEENLHGNKKDGNAFGWTERYKVAVGVA 440
H NI+ L+ +N L LV++F+ + ++ GN G + ++ +
Sbjct: 61 KHENIVRLYDVIHTENKLTLVFEFMDNDLKKYMDSRTVGNTPRGLELNLVKYFQWQL--L 118
Query: 441 EALDYLHNSCEQPVIHKDVKSSNILLSDDFEPQLSDFGLASWLSTSSSHLTCTDVAGTFG 500
+ L + H E ++H+D+K N+L++ + +L DFGLA + + V T
Sbjct: 119 QGLAFCH---ENKILHRDLKPQNLLINKRGQLKLGDFGLARAFGIPVNTFSSEVV--TLW 173
Query: 501 YLAPEYFMHGKV-SEKIDVYAFGIVLLELLSGKKPINSENPKGQESLVM 548
Y AP+ M + S ID+++ G +L E+++GK N + Q L+
Sbjct: 174 YRAPDVLMGSRTYSTSIDIWSCGCILAEMITGKPLFPGTNDEEQLKLIF 222
>pdb|2HK5|A Chain A, Hck Kinase In Complex With Lck Targetted Inhibitor Pg-
1009247
Length = 270
Score = 72.4 bits (176), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 47/197 (23%), Positives = 102/197 (51%), Gaps = 8/197 (4%)
Query: 339 VGKGGHSHVYRGCLPDGKELAVKILKPSEDVLKEFASEIEIITALHHRNIISLFGFCFED 398
+G G V+ ++AVK +KP ++ F +E ++ L H ++ L ++
Sbjct: 23 LGAGQFGEVWMATYNKHTKVAVKTMKPGSMSVEAFLAEANVMKTLQHDKLVKLHAVVTKE 82
Query: 399 NNLLLVYDFLSRGSLEENLHGNKKDGNAFGWTERYKVAVGVAEALDYLHNSCEQPVIHKD 458
+ ++ +F+++GSL + L + +G+ + + +AE + ++ ++ IH+D
Sbjct: 83 P-IYIITEFMAKGSLLDFLKSD--EGSKQPLPKLIDFSAQIAEGMAFIE---QRNYIHRD 136
Query: 459 VKSSNILLSDDFEPQLSDFGLASWLSTSSSHLTCTDVAGTFGYLAPEYFMHGKVSEKIDV 518
++++NIL+S +++DFGLA + + + + APE G + K DV
Sbjct: 137 LRAANILVSASLVCKIADFGLAR-VIEDNEYTAREGAKFPIKWTAPEAINFGSFTIKSDV 195
Query: 519 YAFGIVLLELLS-GKKP 534
++FGI+L+E+++ G+ P
Sbjct: 196 WSFGILLMEIVTYGRIP 212
>pdb|4GT4|A Chain A, Structure Of Unliganded, Inactive Ror2 Kinase Domain
pdb|4GT4|B Chain B, Structure Of Unliganded, Inactive Ror2 Kinase Domain
Length = 308
Score = 72.0 bits (175), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 60/230 (26%), Positives = 107/230 (46%), Gaps = 22/230 (9%)
Query: 324 QELLSATSNFLPEYLVGKGGHSHVYRGCL--PDGKE----LAVKILKPSED--VLKEFAS 375
+E+ + F+ E +G+ VY+G L P E +A+K LK + + +EF
Sbjct: 21 KEISLSAVRFMEE--LGEDRFGKVYKGHLFGPAPGEQTQAVAIKTLKDKAEGPLREEFRH 78
Query: 376 EIEIITALHHRNIISLFGFCFEDNNLLLVYDFLSRGSLEENLHGNKKDGNAFGWTERYKV 435
E + L H N++ L G +D L +++ + S G L E L + G T+ +
Sbjct: 79 EAMLRARLQHPNVVCLLGVVTKDQPLSMIFSYCSHGDLHEFLVMRSPHSDV-GSTDDDRT 137
Query: 436 AVGVAEALDYLHNSCE----------QPVIHKDVKSSNILLSDDFEPQLSDFGLASWLST 485
E D++H + V+HKD+ + N+L+ D ++SD GL +
Sbjct: 138 VKSALEPPDFVHLVAQIAAGMEYLSSHHVVHKDLATRNVLVYDKLNVKISDLGLFREVYA 197
Query: 486 SSSHLTCTDVAGTFGYLAPEYFMHGKVSEKIDVYAFGIVLLELLS-GKKP 534
+ + + ++APE M+GK S D++++G+VL E+ S G +P
Sbjct: 198 ADYYKLLGNSLLPIRWMAPEAIMYGKFSIDSDIWSYGVVLWEVFSYGLQP 247
>pdb|3Q4T|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dorsomorphin
pdb|3Q4T|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dorsomorphin
pdb|3SOC|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With A Quinazolin
pdb|3SOC|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With A Quinazolin
pdb|4ASX|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dihydro-Bauerine C
pdb|4ASX|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dihydro-Bauerine C
Length = 322
Score = 72.0 bits (175), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 61/192 (31%), Positives = 91/192 (47%), Gaps = 27/192 (14%)
Query: 358 LAVKILKPSEDVLKEFASEIEI--ITALHHRNIISLFGF----CFEDNNLLLVYDFLSRG 411
+AVKI P +D + + +E E+ + + H NI+ G D +L L+ F +G
Sbjct: 50 VAVKIF-PIQDK-QSWQNEYEVYSLPGMKHENILQFIGAEKRGTSVDVDLWLITAFHEKG 107
Query: 412 SLEENLHGNKKDGNAFGWTERYKVAVGVAEALDYLHNSC------EQPVI-HKDVKSSNI 464
SL + L N W E +A +A L YLH +P I H+D+KS N+
Sbjct: 108 SLSDFL-----KANVVSWNELCHIAETMARGLAYLHEDIPGLKDGHKPAISHRDIKSKNV 162
Query: 465 LLSDDFEPQLSDFGLASWLSTSSSHLTCTDVAGTFGYLAPEYFMHGKVS------EKIDV 518
LL ++ ++DFGLA S GT Y+APE + G ++ +ID+
Sbjct: 163 LLKNNLTACIADFGLALKFEAGKSAGDTHGQVGTRRYMAPE-VLEGAINFQRDAFLRIDM 221
Query: 519 YAFGIVLLELLS 530
YA G+VL EL S
Sbjct: 222 YAMGLVLWELAS 233
>pdb|2XYU|A Chain A, Crystal Structure Of Epha4 Kinase Domain In Complex With
Vuf 12058
Length = 285
Score = 72.0 bits (175), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 57/207 (27%), Positives = 103/207 (49%), Gaps = 14/207 (6%)
Query: 336 EYLVGKGGHSHVYRGCL--PDGKEL--AVKILKP--SEDVLKEFASEIEIITALHHRNII 389
E ++G G V G L P +E+ A+K LK ++ ++F SE I+ H NII
Sbjct: 13 EKVIGVGEFGEVCSGRLKVPGKREICVAIKTLKAGYTDKQRRDFLSEASIMGQFDHPNII 72
Query: 390 SLFGFCFEDNNLLLVYDFLSRGSLEENLHGNKKDGNAFGWTERYKVAVGVAEALDYLHNS 449
L G + ++++ +++ GSL+ L N DG F + + G+ + YL
Sbjct: 73 HLEGVVTKCKPVMIITEYMENGSLDAFLRKN--DGR-FTVIQLVGMLRGIGSGMKYLS-- 127
Query: 450 CEQPVIHKDVKSSNILLSDDFEPQLSDFGLASWLSTSSSHLTCTDVAGT-FGYLAPEYFM 508
+ +H+D+ + NIL++ + ++SDFG++ L T + APE
Sbjct: 128 -DMSYVHRDLAARNILVNSNLVCKVSDFGMSRVLEDDPEAAYTTRGGKIPIRWTAPEAIA 186
Query: 509 HGKVSEKIDVYAFGIVLLELLS-GKKP 534
+ K + DV+++GIV+ E++S G++P
Sbjct: 187 YRKFTSASDVWSYGIVMWEVMSYGERP 213
>pdb|3A62|A Chain A, Crystal Structure Of Phosphorylated P70s6k1
Length = 327
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 63/216 (29%), Positives = 111/216 (51%), Gaps = 24/216 (11%)
Query: 338 LVGKGGHSHVYR----GCLPDGKELAVKILKPSEDV--LKEFA---SEIEIITALHHRNI 388
++GKGG+ V++ GK A+K+LK + V K+ A +E I+ + H I
Sbjct: 24 VLGKGGYGKVFQVRKVTGANTGKIFAMKVLKKAMIVRNAKDTAHTKAERNILEEVKHPFI 83
Query: 389 ISLFGFCFE-DNNLLLVYDFLSRGSLEENLHGNKKDGNAFGWTERYKVAVGVAEALDYLH 447
+ L + F+ L L+ ++LS G L L +++G T + +A ++ AL +LH
Sbjct: 84 VDLI-YAFQTGGKLYLILEYLSGGELFMQL---EREGIFMEDTACFYLAE-ISMALGHLH 138
Query: 448 NSCEQPVIHKDVKSSNILLSDDFEPQLSDFGLA--SWLSTSSSHLTCTDVAGTFGYLAPE 505
++ +I++D+K NI+L+ +L+DFGL S + +H C GT Y+APE
Sbjct: 139 ---QKGIIYRDLKPENIMLNHQGHVKLTDFGLCKESIHDGTVTHXFC----GTIEYMAPE 191
Query: 506 YFMHGKVSEKIDVYAFGIVLLELLSGKKPINSENPK 541
M + +D ++ G ++ ++L+G P EN K
Sbjct: 192 ILMRSGHNRAVDWWSLGALMYDMLTGAPPFTGENRK 227
>pdb|1QCF|A Chain A, Crystal Structure Of Hck In Complex With A Src Family-
Selective Tyrosine Kinase Inhibitor
pdb|2C0I|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-420983
pdb|2C0I|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-420983
pdb|2C0O|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-770041
pdb|2C0O|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-770041
pdb|2C0T|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-641359
pdb|2C0T|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-641359
Length = 454
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 47/197 (23%), Positives = 102/197 (51%), Gaps = 8/197 (4%)
Query: 339 VGKGGHSHVYRGCLPDGKELAVKILKPSEDVLKEFASEIEIITALHHRNIISLFGFCFED 398
+G G V+ ++AVK +KP ++ F +E ++ L H ++ L ++
Sbjct: 196 LGAGQFGEVWMATYNKHTKVAVKTMKPGSMSVEAFLAEANVMKTLQHDKLVKLHAVVTKE 255
Query: 399 NNLLLVYDFLSRGSLEENLHGNKKDGNAFGWTERYKVAVGVAEALDYLHNSCEQPVIHKD 458
+ ++ +F+++GSL + L + +G+ + + +AE + ++ ++ IH+D
Sbjct: 256 P-IYIITEFMAKGSLLDFLKSD--EGSKQPLPKLIDFSAQIAEGMAFIE---QRNYIHRD 309
Query: 459 VKSSNILLSDDFEPQLSDFGLASWLSTSSSHLTCTDVAGTFGYLAPEYFMHGKVSEKIDV 518
++++NIL+S +++DFGLA + + + + APE G + K DV
Sbjct: 310 LRAANILVSASLVCKIADFGLAR-VIEDNEYTAREGAKFPIKWTAPEAINFGSFTIKSDV 368
Query: 519 YAFGIVLLELLS-GKKP 534
++FGI+L+E+++ G+ P
Sbjct: 369 WSFGILLMEIVTYGRIP 385
>pdb|3ZZW|A Chain A, Crystal Structure Of The Kinase Domain Of Ror2
pdb|3ZZW|B Chain B, Crystal Structure Of The Kinase Domain Of Ror2
Length = 289
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 60/230 (26%), Positives = 107/230 (46%), Gaps = 22/230 (9%)
Query: 324 QELLSATSNFLPEYLVGKGGHSHVYRGCL--PDGKE----LAVKILKPSED--VLKEFAS 375
+E+ + F+ E +G+ VY+G L P E +A+K LK + + +EF
Sbjct: 4 KEISLSAVRFMEE--LGEDRFGKVYKGHLFGPAPGEQTQAVAIKTLKDKAEGPLREEFRH 61
Query: 376 EIEIITALHHRNIISLFGFCFEDNNLLLVYDFLSRGSLEENLHGNKKDGNAFGWTERYKV 435
E + L H N++ L G +D L +++ + S G L E L + G T+ +
Sbjct: 62 EAMLRARLQHPNVVCLLGVVTKDQPLSMIFSYCSHGDLHEFLVMRSPHSDV-GSTDDDRT 120
Query: 436 AVGVAEALDYLHNSCE----------QPVIHKDVKSSNILLSDDFEPQLSDFGLASWLST 485
E D++H + V+HKD+ + N+L+ D ++SD GL +
Sbjct: 121 VKSALEPPDFVHLVAQIAAGMEYLSSHHVVHKDLATRNVLVYDKLNVKISDLGLFREVYA 180
Query: 486 SSSHLTCTDVAGTFGYLAPEYFMHGKVSEKIDVYAFGIVLLELLS-GKKP 534
+ + + ++APE M+GK S D++++G+VL E+ S G +P
Sbjct: 181 ADYYKLLGNSLLPIRWMAPEAIMYGKFSIDSDIWSYGVVLWEVFSYGLQP 230
>pdb|1ZY4|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant In Apo Form.
pdb|1ZY4|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant In Apo Form.
pdb|1ZY5|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant Complexed With Amppnp.
pdb|1ZY5|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant Complexed With Amppnp
Length = 303
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 59/231 (25%), Positives = 106/231 (45%), Gaps = 35/231 (15%)
Query: 327 LSATSNFLPEYLVGKGGHSHVY--RGCLPDGKELAVKILKPSEDVLKEFASEIEIITALH 384
L S+F ++G+G V R L D + A+K ++ +E+ L SE+ ++ +L+
Sbjct: 2 LRYASDFEEIAVLGQGAFGQVVKARNAL-DSRYYAIKKIRHTEEKLSTILSEVMLLASLN 60
Query: 385 HRNIISLFGFCFEDNN-------------LLLVYDFLSRGSLEENLHGNKKDGNAFGWTE 431
H+ ++ + E N L + ++ G+L + +H + E
Sbjct: 61 HQYVVRYYAAWLERRNFVKPMTAVKKKSTLFIQMEYCENGTLYDLIHSENLNQQR---DE 117
Query: 432 RYKVAVGVAEALDYLHNSCEQPVIHKDVKSSNILLSDDFEPQLSDFGLAS-------WLS 484
+++ + EAL Y+H+ Q +IH+D+K NI + + ++ DFGLA L
Sbjct: 118 YWRLFRQILEALSYIHS---QGIIHRDLKPMNIFIDESRNVKIGDFGLAKNVHRSLDILK 174
Query: 485 TSSSHL-----TCTDVAGTFGYLAPEYF-MHGKVSEKIDVYAFGIVLLELL 529
S +L T GT Y+A E G +EKID+Y+ GI+ E++
Sbjct: 175 LDSQNLPGSSDNLTSAIGTAMYVATEVLDGTGHYNEKIDMYSLGIIFFEMI 225
>pdb|3GVU|A Chain A, The Crystal Structure Of Human Abl2 In Complex With
Gleevec
pdb|3HMI|A Chain A, The Crystal Structure Of Human Abl2 In Complex With
5-Amino-3-{[4-
(Aminosulfonyl)phenyl]amino}-N-(2,
6-Difluorophenyl)-1h-1,2,4- Triazole-1-Carbothioamide
pdb|2XYN|A Chain A, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
pdb|2XYN|B Chain B, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
pdb|2XYN|C Chain C, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
Length = 292
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 53/199 (26%), Positives = 99/199 (49%), Gaps = 10/199 (5%)
Query: 339 VGKGGHSHVYRGCLPD-GKELAVKILKPSEDVLKEFASEIEIITALHHRNIISLFGFCFE 397
+G G + VY G +AVK LK ++EF E ++ + H N++ L G C
Sbjct: 40 LGGGQYGEVYVGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTL 99
Query: 398 DNNLLLVYDFLSRGSLEENLH-GNKKDGNAFGWTERYKVAVGVAEALDYLHNSCEQPVIH 456
+ +V +++ G+L + L N+++ A +A ++ A++YL ++ IH
Sbjct: 100 EPPFYIVTEYMPYGNLLDYLRECNREEVTA---VVLLYMATQISSAMEYLE---KKNFIH 153
Query: 457 KDVKSSNILLSDDFEPQLSDFGLASWLSTSSSHLTCTDVAGTFGYLAPEYFMHGKVSEKI 516
+D+ + N L+ ++ +++DFGL+ L T ++ + APE + S K
Sbjct: 154 RDLAARNCLVGENHVVKVADFGLSR-LMTGDTYTAHAGAKFPIKWTAPESLAYNTFSIKS 212
Query: 517 DVYAFGIVLLELLS-GKKP 534
DV+AFG++L E+ + G P
Sbjct: 213 DVWAFGVLLWEIATYGMSP 231
>pdb|2IVS|A Chain A, Crystal Structure Of Non-Phosphorylated Ret Tyrosine
Kinase Domain
pdb|2IVS|B Chain B, Crystal Structure Of Non-Phosphorylated Ret Tyrosine
Kinase Domain
Length = 314
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 57/230 (24%), Positives = 110/230 (47%), Gaps = 41/230 (17%)
Query: 337 YLVGKGGHSHVYRGCLPDGKELAVKILK----PSEDVLKEFASEIEIITALHHRNIISLF 392
+L G+ G++ V AVK+LK PSE L++ SE ++ ++H ++I L+
Sbjct: 46 HLKGRAGYTTV-----------AVKMLKENASPSE--LRDLLSEFNVLKQVNHPHVIKLY 92
Query: 393 GFCFEDNNLLLVYDFLSRGSLEENLHGNKK--------------------DGNAFGWTER 432
G C +D LLL+ ++ GSL L ++K D A +
Sbjct: 93 GACSQDGPLLLIVEYAKYGSLRGFLRESRKVGPGYLGSGGSRNSSSLDHPDERALTMGDL 152
Query: 433 YKVAVGVAEALDYLHNSCEQPVIHKDVKSSNILLSDDFEPQLSDFGLASWLSTSSSHLTC 492
A +++ + YL E ++H+D+ + NIL+++ + ++SDFGL+ + S++
Sbjct: 153 ISFAWQISQGMQYL---AEMKLVHRDLAARNILVAEGRKMKISDFGLSRDVYEEDSYVKR 209
Query: 493 TDVAGTFGYLAPEYFMHGKVSEKIDVYAFGIVLLELLS-GKKPINSENPK 541
+ ++A E + + DV++FG++L E+++ G P P+
Sbjct: 210 SQGRIPVKWMAIESLFDHIYTTQSDVWSFGVLLWEIVTLGGNPYPGIPPE 259
>pdb|3A60|A Chain A, Crystal Structure Of Unphosphorylated P70s6k1 (Form I)
pdb|3A60|B Chain B, Crystal Structure Of Unphosphorylated P70s6k1 (Form I)
pdb|3A61|A Chain A, Crystal Structure Of Unphosphorylated P70s6k1 (Form Ii)
Length = 327
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 63/216 (29%), Positives = 111/216 (51%), Gaps = 24/216 (11%)
Query: 338 LVGKGGHSHVYR----GCLPDGKELAVKILKPSEDV--LKEFA---SEIEIITALHHRNI 388
++GKGG+ V++ GK A+K+LK + V K+ A +E I+ + H I
Sbjct: 24 VLGKGGYGKVFQVRKVTGANTGKIFAMKVLKKAMIVRNAKDTAHTKAERNILEEVKHPFI 83
Query: 389 ISLFGFCFE-DNNLLLVYDFLSRGSLEENLHGNKKDGNAFGWTERYKVAVGVAEALDYLH 447
+ L + F+ L L+ ++LS G L L +++G T + +A ++ AL +LH
Sbjct: 84 VDLI-YAFQTGGKLYLILEYLSGGELFMQL---EREGIFMEDTACFYLAE-ISMALGHLH 138
Query: 448 NSCEQPVIHKDVKSSNILLSDDFEPQLSDFGLA--SWLSTSSSHLTCTDVAGTFGYLAPE 505
++ +I++D+K NI+L+ +L+DFGL S + +H C GT Y+APE
Sbjct: 139 ---QKGIIYRDLKPENIMLNHQGHVKLTDFGLCKESIHDGTVTHTFC----GTIEYMAPE 191
Query: 506 YFMHGKVSEKIDVYAFGIVLLELLSGKKPINSENPK 541
M + +D ++ G ++ ++L+G P EN K
Sbjct: 192 ILMRSGHNRAVDWWSLGALMYDMLTGAPPFTGENRK 227
>pdb|4APC|A Chain A, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
pdb|4APC|B Chain B, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
pdb|4B9D|A Chain A, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
With Inhibitor.
pdb|4B9D|B Chain B, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
With Inhibitor
Length = 350
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 58/184 (31%), Positives = 94/184 (51%), Gaps = 14/184 (7%)
Query: 354 DGKELAVK---ILKPSEDVLKEFASEIEIITALHHRNIISLFGFCFEDN-NLLLVYDFLS 409
DG++ +K I + S +E E+ ++ + H NI+ + FE+N +L +V D+
Sbjct: 48 DGRQYVIKEINISRMSSKEREESRREVAVLANMKHPNIVQ-YRESFEENGSLYIVMDYCE 106
Query: 410 RGSLEENLHGNKKDGNAFGWTERYKVAVGVAEALDYLHNSCEQPVIHKDVKSSNILLSDD 469
G L + ++ K G F + V + AL ++H ++ ++H+D+KS NI L+ D
Sbjct: 107 GGDLFKRINAQK--GVLFQEDQILDWFVQICLALKHVH---DRKILHRDIKSQNIFLTKD 161
Query: 470 FEPQLSDFGLASWL-STSSSHLTCTDVAGTFGYLAPEYFMHGKVSEKIDVYAFGIVLLEL 528
QL DFG+A L ST C GT YL+PE + + K D++A G VL EL
Sbjct: 162 GTVQLGDFGIARVLNSTVELARACI---GTPYYLSPEICENKPYNNKSDIWALGCVLYEL 218
Query: 529 LSGK 532
+ K
Sbjct: 219 CTLK 222
>pdb|2VZ6|A Chain A, Structure Of Human Calcium Calmodulin Dependent Protein
Kinase Type Ii Alpha (Camk2a) In Complex With Indirubin
E804
pdb|2VZ6|B Chain B, Structure Of Human Calcium Calmodulin Dependent Protein
Kinase Type Ii Alpha (Camk2a) In Complex With Indirubin
E804
Length = 313
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 59/209 (28%), Positives = 99/209 (47%), Gaps = 18/209 (8%)
Query: 339 VGKGGHSHVYRGCLP--DGKELAVKIL---KPSEDVLKEFASEIEIITALHHRNIISLFG 393
+GKG S V R C+ G+E A KI+ K S ++ E I L H NI+ L
Sbjct: 30 LGKGAFS-VVRRCVKVLAGQEYAAKIINTKKLSARDHQKLEREARICRLLKHPNIVRLHD 88
Query: 394 FCFEDNNLLLVYDFLSRGSLEENLHGNKKDGNAFGWTERYKVAVGVAEALDYLHNSCEQP 453
E+ + L++D ++ G L E++ + A + + + L+ + + +
Sbjct: 89 SISEEGHHYLIFDLVTGGELFEDIVAREYYSEA-------DASHCIQQILEAVLHCHQMG 141
Query: 454 VIHKDVKSSNILLSDDFEP---QLSDFGLASWLSTSSSHLTCTDVAGTFGYLAPEYFMHG 510
V+H+D+K N+LL+ + +L+DFGLA + AGT GYL+PE
Sbjct: 142 VVHRDLKPENLLLASKLKGAAVKLADFGLA--IEVEGEQQAWFGFAGTPGYLSPEVLRKD 199
Query: 511 KVSEKIDVYAFGIVLLELLSGKKPINSEN 539
+ +D++A G++L LL G P E+
Sbjct: 200 PYGKPVDLWACGVILYILLVGYPPFWDED 228
>pdb|3MPM|A Chain A, Lck Complexed With A Pyrazolopyrimidine
Length = 267
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 50/197 (25%), Positives = 99/197 (50%), Gaps = 8/197 (4%)
Query: 339 VGKGGHSHVYRGCLPDGKELAVKILKPSEDVLKEFASEIEIITALHHRNIISLFGFCFED 398
+G G V+ G ++AVK LK F +E ++ L H+ ++ L+ ++
Sbjct: 17 LGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDAFLAEANLMKQLQHQRLVRLYAVVTQE 76
Query: 399 NNLLLVYDFLSRGSLEENLHGNKKDGNAFGWTERYKVAVGVAEALDYLHNSCEQPVIHKD 458
+ ++ +++ GSL + L G + +A +AE + ++ E+ IH++
Sbjct: 77 P-IYIITEYMENGSLVDFL--KTPSGIKLTINKLLDMAAQIAEGMAFIE---ERNYIHRN 130
Query: 459 VKSSNILLSDDFEPQLSDFGLASWLSTSSSHLTCTDVAGTFGYLAPEYFMHGKVSEKIDV 518
++++NIL+SD +++DFGLA L + + + APE +G + K DV
Sbjct: 131 LRAANILVSDTLSCKIADFGLAR-LIEDNEYTAREGAKFPIKWTAPEAINYGTFTIKSDV 189
Query: 519 YAFGIVLLELLS-GKKP 534
++FGI+L E+++ G+ P
Sbjct: 190 WSFGILLTEIVTHGRIP 206
>pdb|1FOT|A Chain A, Structure Of The Unliganded Camp-Dependent Protein Kinase
Catalytic Subunit From Saccharomyces Cerevisiae
Length = 318
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 57/204 (27%), Positives = 101/204 (49%), Gaps = 17/204 (8%)
Query: 340 GKGGHSHVYRGCLPDGKELAVKILKPSEDV-LKEFA---SEIEIITALHHRNIISLFGFC 395
G G H+ R +G+ A+K+LK V LK+ E +++ + H II ++G
Sbjct: 17 GSFGRVHLIR-SRHNGRYYAMKVLKKEIVVRLKQVEHTNDERLMLSIVTHPFIIRMWGTF 75
Query: 396 FEDNNLLLVYDFLSRGSLEENLHGNKKDGNAFGWTERYKVAVGVAEALDYLHNSCEQPVI 455
+ + ++ D++ G L L +++ N A V AL+YLH+ + +I
Sbjct: 76 QDAQQIFMIMDYIEGGELFSLLRKSQRFPNPVAKF----YAAEVCLALEYLHS---KDII 128
Query: 456 HKDVKSSNILLSDDFEPQLSDFGLASWLSTSSSHLTCTDVAGTFGYLAPEYFMHGKVSEK 515
++D+K NILL + +++DFG A ++ + L GT Y+APE ++
Sbjct: 129 YRDLKPENILLDKNGHIKITDFGFAKYVPDVTYXL-----CGTPDYIAPEVVSTKPYNKS 183
Query: 516 IDVYAFGIVLLELLSGKKPINSEN 539
ID ++FGI++ E+L+G P N
Sbjct: 184 IDWWSFGILIYEMLAGYTPFYDSN 207
>pdb|2J7T|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
Bound To Su11274
pdb|4AOT|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
(Lok) Bound To Gw830263a
pdb|4AOT|B Chain B, Crystal Structure Of Human Serine Threonine Kinase-10
(Lok) Bound To Gw830263a
pdb|4EQU|A Chain A, Human Stk-10 (Lok) Kinase Domain In Dfg-Out Conformation
With Inhibitor Dsa-7
pdb|4EQU|B Chain B, Human Stk-10 (Lok) Kinase Domain In Dfg-Out Conformation
With Inhibitor Dsa-7
Length = 302
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 60/216 (27%), Positives = 106/216 (49%), Gaps = 29/216 (13%)
Query: 339 VGKGGHSHVYR------GCLPDGKELAVKILKPSEDVLKEFASEIEIITALHHRNIISLF 392
+G G VY+ G L K + K SE+ L+++ EIEI+ H I+ L
Sbjct: 27 LGDGAFGKVYKAKNKETGALAAAKVIETK----SEEELEDYIVEIEILATCDHPYIVKLL 82
Query: 393 GFCFEDNNLLLVYDFLSRGSLEENLHGNKKDGNAFGWTERYKVAV--GVAEALDYLHNSC 450
G + D L ++ +F G+++ + + G TE V + EAL++LH+
Sbjct: 83 GAYYHDGKLWIMIEFCPGGAVDAIMLELDR-----GLTEPQIQVVCRQMLEALNFLHS-- 135
Query: 451 EQPVIHKDVKSSNILLSDDFEPQLSDFGL-ASWLSTSSSHLTCTDVAGTFGYLAPEYFMH 509
+ +IH+D+K+ N+L++ + + +L+DFG+ A L T GT ++APE M
Sbjct: 136 -KRIIHRDLKAGNVLMTLEGDIRLADFGVSAKNLKTLQKR---DSFIGTPYWMAPEVVMC 191
Query: 510 GKVSE-----KIDVYAFGIVLLELLSGKKPINSENP 540
+ + K D+++ GI L+E+ + P + NP
Sbjct: 192 ETMKDTPYDYKADIWSLGITLIEMAQIEPPHHELNP 227
>pdb|4BC6|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
Bound To Novel Bosutinib Isoform 1, Previously Thought
To Be Bosutinib
Length = 293
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 60/216 (27%), Positives = 106/216 (49%), Gaps = 29/216 (13%)
Query: 339 VGKGGHSHVYR------GCLPDGKELAVKILKPSEDVLKEFASEIEIITALHHRNIISLF 392
+G G VY+ G L K + K SE+ L+++ EIEI+ H I+ L
Sbjct: 19 LGDGAFGKVYKAKNKETGALAAAKVIETK----SEEELEDYIVEIEILATCDHPYIVKLL 74
Query: 393 GFCFEDNNLLLVYDFLSRGSLEENLHGNKKDGNAFGWTERYKVAV--GVAEALDYLHNSC 450
G + D L ++ +F G+++ + + G TE V + EAL++LH+
Sbjct: 75 GAYYHDGKLWIMIEFCPGGAVDAIMLELDR-----GLTEPQIQVVCRQMLEALNFLHS-- 127
Query: 451 EQPVIHKDVKSSNILLSDDFEPQLSDFGL-ASWLSTSSSHLTCTDVAGTFGYLAPEYFMH 509
+ +IH+D+K+ N+L++ + + +L+DFG+ A L T GT ++APE M
Sbjct: 128 -KRIIHRDLKAGNVLMTLEGDIRLADFGVSAKNLKTLQKR---DSFIGTPYWMAPEVVMC 183
Query: 510 GKVSE-----KIDVYAFGIVLLELLSGKKPINSENP 540
+ + K D+++ GI L+E+ + P + NP
Sbjct: 184 ETMKDTPYDYKADIWSLGITLIEMAQIEPPHHELNP 219
>pdb|2YZA|A Chain A, Crystal Structure Of Kinase Domain Of Human
5'-Amp-Activated Protein Kinase Alpha-2 Subunit Mutant
(T172d)
pdb|3AQV|A Chain A, Human Amp-Activated Protein Kinase Alpha 2 Subunit Kinase
Domain (T172d) Complexed With Compound C
Length = 276
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 53/193 (27%), Positives = 97/193 (50%), Gaps = 21/193 (10%)
Query: 355 GKELAVKILKP----SEDVLKEFASEIEIITALHHRNIISLFGFCFEDNNLLLVYDFLSR 410
G ++AVKIL S DV+ + EI+ + H +II L+ + +V +++S
Sbjct: 36 GHKVAVKILNRQKIRSLDVVGKIKREIQNLKLFRHPHIIKLYQVISTPTDFFMVMEYVSG 95
Query: 411 GSLEENL--HGNKKDGNAFGWTERYKVAVGVAEALDYLHNSCEQPVIHKDVKSSNILLSD 468
G L + + HG ++ E ++ + A+DY H V+H+D+K N+LL
Sbjct: 96 GELFDYICKHGRVEE------MEARRLFQQILSAVDYCHRHM---VVHRDLKPENVLLDA 146
Query: 469 DFEPQLSDFGLASWLSTSSSHLTCTDVAGTFGYLAPEYFMHGKV--SEKIDVYAFGIVLL 526
+++DFGL++ +S D G+ Y APE + G++ ++D+++ G++L
Sbjct: 147 HMNAKIADFGLSNMMSDGE---FLRDSCGSPNYAAPE-VISGRLYAGPEVDIWSCGVILY 202
Query: 527 ELLSGKKPINSEN 539
LL G P + E+
Sbjct: 203 ALLCGTLPFDDEH 215
>pdb|1AD5|A Chain A, Src Family Kinase Hck-Amp-Pnp Complex
pdb|1AD5|B Chain B, Src Family Kinase Hck-Amp-Pnp Complex
pdb|2HCK|A Chain A, Src Family Kinase Hck-Quercetin Complex
pdb|2HCK|B Chain B, Src Family Kinase Hck-Quercetin Complex
Length = 438
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 49/199 (24%), Positives = 101/199 (50%), Gaps = 22/199 (11%)
Query: 339 VGKGGHSHVYRGCLPDGKELAVKILKPSEDVLKEFASEIEIITALHHRNIISLFGFCFED 398
+G G V+ ++AVK +KP ++ F +E ++ L H ++ L ++
Sbjct: 190 LGAGQFGEVWMATYNKHTKVAVKTMKPGSMSVEAFLAEANVMKTLQHDKLVKLHAVVTKE 249
Query: 399 NNLLLVYDFLSRGSLEENLHGNKKDGNAFGWTERYKVAVGVAEALDYLHNSCEQPVIHKD 458
+ ++ +F+++GSL + L + +G+ + + +AE + ++ ++ IH+D
Sbjct: 250 P-IYIITEFMAKGSLLDFLKSD--EGSKQPLPKLIDFSAQIAEGMAFIE---QRNYIHRD 303
Query: 459 VKSSNILLSDDFEPQLSDFGLASWLSTSSSHLTCTDVAGTF--GYLAPEYFMHGKVSEKI 516
++++NIL+S +++DFGLA V F + APE G + K
Sbjct: 304 LRAANILVSASLVCKIADFGLAR-------------VGAKFPIKWTAPEAINFGSFTIKS 350
Query: 517 DVYAFGIVLLELLS-GKKP 534
DV++FGI+L+E+++ G+ P
Sbjct: 351 DVWSFGILLMEIVTYGRIP 369
>pdb|2V7O|A Chain A, Crystal Structure Of Human Calcium-Calmodulin-Dependent
Protein Kinase Ii Gamma
Length = 336
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 62/229 (27%), Positives = 107/229 (46%), Gaps = 22/229 (9%)
Query: 323 YQELLSATSNFLPEYLV----GKGGHSHVYRGCLPDG--KELAVKIL---KPSEDVLKEF 373
Y + ++ + F +Y + GKG S V R C+ +E A KI+ K S ++
Sbjct: 19 YFQXMATCTRFTDDYQLFEELGKGAFS-VVRRCVKKTPTQEYAAKIINTKKLSARDHQKL 77
Query: 374 ASEIEIITALHHRNIISLFGFCFEDNNLLLVYDFLSRGSLEENLHGNKKDGNAFGWTERY 433
E I L H NI+ L E+ LV+D ++ G L E++ + A +
Sbjct: 78 EREARICRLLKHPNIVRLHDSISEEGFHYLVFDLVTGGELFEDIVAREYYSEA----DAS 133
Query: 434 KVAVGVAEALDYLHNSCEQPVIHKDVKSSNILLSDDFEP---QLSDFGLASWLSTSSSHL 490
+ E+++++H + ++H+D+K N+LL+ + +L+DFGLA +
Sbjct: 134 HCIHQILESVNHIH---QHDIVHRDLKPENLLLASKCKGAAVKLADFGLA--IEVQGEQQ 188
Query: 491 TCTDVAGTFGYLAPEYFMHGKVSEKIDVYAFGIVLLELLSGKKPINSEN 539
AGT GYL+PE + +D++A G++L LL G P E+
Sbjct: 189 AWFGFAGTPGYLSPEVLRKDPYGKPVDIWACGVILYILLVGYPPFWDED 237
>pdb|3LMG|A Chain A, Crystal Structure Of The Erbb3 Kinase Domain In Complex
With Amp-Pnp
pdb|3LMG|B Chain B, Crystal Structure Of The Erbb3 Kinase Domain In Complex
With Amp-Pnp
Length = 344
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 52/205 (25%), Positives = 104/205 (50%), Gaps = 15/205 (7%)
Query: 338 LVGKGGHSHVYRGC-LPDGKELAVKI-LKPSED-----VLKEFASEIEIITALHHRNIIS 390
++G G V++G +P+G+ + + + +K ED + + I +L H +I+
Sbjct: 38 VLGSGVFGTVHKGVWIPEGESIKIPVCIKVIEDKSGRQSFQAVTDHMLAIGSLDHAHIVR 97
Query: 391 LFGFCFEDNNLLLVYDFLSRGSLEENLHGNKKDGNAFGWTERYKVAVGVAEALDYLHNSC 450
L G C ++L LV +L GSL +++ ++ A G V +A+ + YL
Sbjct: 98 LLGLC-PGSSLQLVTQYLPLGSLLDHVRQHR---GALGPQLLLNWGVQIAKGMYYLE--- 150
Query: 451 EQPVIHKDVKSSNILLSDDFEPQLSDFGLASWLSTSSSHLTCTDVAGTFGYLAPEYFMHG 510
E ++H+++ + N+LL + Q++DFG+A L L ++ ++A E G
Sbjct: 151 EHGMVHRNLAARNVLLKSPSQVQVADFGVADLLPPDDKQLLYSEAKTPIKWMALESIHFG 210
Query: 511 KVSEKIDVYAFGIVLLELLS-GKKP 534
K + + DV+++G+ + EL++ G +P
Sbjct: 211 KYTHQSDVWSYGVTVWELMTFGAEP 235
>pdb|2QLU|A Chain A, Crystal Structure Of Activin Receptor Type Ii Kinase
Domain From Human
Length = 314
Score = 70.9 bits (172), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 63/193 (32%), Positives = 89/193 (46%), Gaps = 28/193 (14%)
Query: 358 LAVKILKPSEDVLKEFASEIEIIT--ALHHRNIISLFGFCFEDNNL----LLVYDFLSRG 411
+AVKI P +D + + SE EI + + H N++ +NL L+ F +G
Sbjct: 41 VAVKIF-PLQDK-QSWQSEREIFSTPGMKHENLLQFIAAEKRGSNLEVELWLITAFHDKG 98
Query: 412 SLEENLHGNKKDGNAFGWTERYKVAVGVAEALDYLHNSC-------EQPVI-HKDVKSSN 463
SL + L GN W E VA ++ L YLH +P I H+D KS N
Sbjct: 99 SLTDYL-----KGNIITWNELCHVAETMSRGLSYLHEDVPWCRGEGHKPSIAHRDFKSKN 153
Query: 464 ILLSDDFEPQLSDFGLASWLSTSSSHLTCTDVAGTFGYLAPEYFMHGKVS------EKID 517
+LL D L+DFGLA GT Y+APE + G ++ +ID
Sbjct: 154 VLLKSDLTAVLADFGLAVRFEPGKPPGDTHGQVGTRRYMAPE-VLEGAINFQRDAFLRID 212
Query: 518 VYAFGIVLLELLS 530
+YA G+VL EL+S
Sbjct: 213 MYAMGLVLWELVS 225
>pdb|3SLS|A Chain A, Crystal Structure Of Human Mek-1 Kinase In Complex With
Ucb1353770 And Amppnp
pdb|3SLS|B Chain B, Crystal Structure Of Human Mek-1 Kinase In Complex With
Ucb1353770 And Amppnp
Length = 304
Score = 70.5 bits (171), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 53/191 (27%), Positives = 98/191 (51%), Gaps = 20/191 (10%)
Query: 353 PDGKELAVKIL----KPSEDVLKEFASEIEIITALHHRNIISLFGFCFEDNNLLLVYDFL 408
P G +A K++ KP+ + + E++++ + I+ +G + D + + + +
Sbjct: 48 PSGLVMARKLIHLEIKPA--IRNQIIRELQVLHECNSPYIVGFYGAFYSDGEISICMEHM 105
Query: 409 SRGSLEENLHGNKKDGNAFGWTERY--KVAVGVAEALDYLHNSCEQPVIHKDVKSSNILL 466
GSL++ L KK G E+ KV++ V + L YL + ++H+DVK SNIL+
Sbjct: 106 DGGSLDQVL---KKAGRI---PEQILGKVSIAVIKGLTYLRE--KHKIMHRDVKPSNILV 157
Query: 467 SDDFEPQLSDFGLASWLSTSSSHLTCTDVAGTFGYLAPEYFMHGKVSEKIDVYAFGIVLL 526
+ E +L DFG++ L S ++ GT Y++PE S + D+++ G+ L+
Sbjct: 158 NSRGEIKLCDFGVSGQLIDSMAN----SFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLV 213
Query: 527 ELLSGKKPINS 537
E+ G+ PI S
Sbjct: 214 EMAVGRYPIGS 224
>pdb|3KEX|A Chain A, Crystal Structure Of The Catalytically Inactive Kinase
Domain Of The Human Epidermal Growth Factor Receptor 3
(Her3)
pdb|3KEX|B Chain B, Crystal Structure Of The Catalytically Inactive Kinase
Domain Of The Human Epidermal Growth Factor Receptor 3
(Her3)
Length = 325
Score = 70.5 bits (171), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 52/205 (25%), Positives = 104/205 (50%), Gaps = 15/205 (7%)
Query: 338 LVGKGGHSHVYRGC-LPDGKELAVKI-LKPSED-----VLKEFASEIEIITALHHRNIIS 390
++G G V++G +P+G+ + + + +K ED + + I +L H +I+
Sbjct: 20 VLGSGVFGTVHKGVWIPEGESIKIPVCIKVIEDKSGRQSFQAVTDHMLAIGSLDHAHIVR 79
Query: 391 LFGFCFEDNNLLLVYDFLSRGSLEENLHGNKKDGNAFGWTERYKVAVGVAEALDYLHNSC 450
L G C ++L LV +L GSL +++ ++ A G V +A+ + YL
Sbjct: 80 LLGLC-PGSSLQLVTQYLPLGSLLDHVRQHR---GALGPQLLLNWGVQIAKGMYYLE--- 132
Query: 451 EQPVIHKDVKSSNILLSDDFEPQLSDFGLASWLSTSSSHLTCTDVAGTFGYLAPEYFMHG 510
E ++H+++ + N+LL + Q++DFG+A L L ++ ++A E G
Sbjct: 133 EHGMVHRNLAARNVLLKSPSQVQVADFGVADLLPPDDKQLLYSEAKTPIKWMALESIHFG 192
Query: 511 KVSEKIDVYAFGIVLLELLS-GKKP 534
K + + DV+++G+ + EL++ G +P
Sbjct: 193 KYTHQSDVWSYGVTVWELMTFGAEP 217
>pdb|2IVT|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain
pdb|2IVU|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain Complexed With The Inhibitor Zd6474
pdb|2X2K|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2L|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2M|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2M|B Chain B, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
Length = 314
Score = 70.5 bits (171), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 54/218 (24%), Positives = 105/218 (48%), Gaps = 40/218 (18%)
Query: 337 YLVGKGGHSHVYRGCLPDGKELAVKILK----PSEDVLKEFASEIEIITALHHRNIISLF 392
+L G+ G++ V AVK+LK PSE L++ SE ++ ++H ++I L+
Sbjct: 46 HLKGRAGYTTV-----------AVKMLKENASPSE--LRDLLSEFNVLKQVNHPHVIKLY 92
Query: 393 GFCFEDNNLLLVYDFLSRGSLEENLHGNKK--------------------DGNAFGWTER 432
G C +D LLL+ ++ GSL L ++K D A +
Sbjct: 93 GACSQDGPLLLIVEYAKYGSLRGFLRESRKVGPGYLGSGGSRNSSSLDHPDERALTMGDL 152
Query: 433 YKVAVGVAEALDYLHNSCEQPVIHKDVKSSNILLSDDFEPQLSDFGLASWLSTSSSHLTC 492
A +++ + YL E ++H+D+ + NIL+++ + ++SDFGL+ + S +
Sbjct: 153 ISFAWQISQGMQYL---AEMKLVHRDLAARNILVAEGRKMKISDFGLSRDVYEEDSXVKR 209
Query: 493 TDVAGTFGYLAPEYFMHGKVSEKIDVYAFGIVLLELLS 530
+ ++A E + + DV++FG++L E+++
Sbjct: 210 SQGRIPVKWMAIESLFDHIYTTQSDVWSFGVLLWEIVT 247
>pdb|2W0J|A Chain A, Crystal Structure Of Chk2 In Complex With Nsc 109555, A
Specific Inhibitor
pdb|2W7X|A Chain A, Cellular Inhibition Of Checkpoint Kinase 2 And
Potentiation Of Cytotoxic Drugs By Novel Chk2 Inhibitor
Pv1019
pdb|2YIQ|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1322
pdb|2YIR|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1352
pdb|2YIT|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Pv1162, A Novel Inhibitor
pdb|2YCQ|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1115
pdb|2YCS|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Pv788
Length = 323
Score = 70.5 bits (171), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 52/168 (30%), Positives = 87/168 (51%), Gaps = 17/168 (10%)
Query: 375 SEIEIITALHHRNIISLFGFCFEDNNLLLVYDFLSRGSLEENLHGNKKDGNAFGWTERYK 434
+EIEI+ L+H II + F F+ + +V + + G L + + GNK+ A Y+
Sbjct: 64 TEIEILKKLNHPCIIKIKNF-FDAEDYYIVLELMEGGELFDKVVGNKRLKEATCKLYFYQ 122
Query: 435 VAVGVAEALDYLHNSCEQPVIHKDVKSSNILLS---DDFEPQLSDFGLASWLSTSSSHLT 491
+ + A+ YLH E +IH+D+K N+LLS +D +++DFG + L +S T
Sbjct: 123 MLL----AVQYLH---ENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGETSLMRT 175
Query: 492 CTDVAGTFGYLAPEYFMH---GKVSEKIDVYAFGIVLLELLSGKKPIN 536
+ GT YLAPE + + +D ++ G++L LSG P +
Sbjct: 176 ---LCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFS 220
>pdb|2XK9|A Chain A, Structural Analysis Of Checkpoint Kinase 2 (Chk2) In
Complex With Inhibitor Pv1533
Length = 322
Score = 70.5 bits (171), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 52/168 (30%), Positives = 87/168 (51%), Gaps = 17/168 (10%)
Query: 375 SEIEIITALHHRNIISLFGFCFEDNNLLLVYDFLSRGSLEENLHGNKKDGNAFGWTERYK 434
+EIEI+ L+H II + F F+ + +V + + G L + + GNK+ A Y+
Sbjct: 63 TEIEILKKLNHPCIIKIKNF-FDAEDYYIVLELMEGGELFDKVVGNKRLKEATCKLYFYQ 121
Query: 435 VAVGVAEALDYLHNSCEQPVIHKDVKSSNILLS---DDFEPQLSDFGLASWLSTSSSHLT 491
+ + A+ YLH E +IH+D+K N+LLS +D +++DFG + L +S T
Sbjct: 122 MLL----AVQYLH---ENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGETSLMRT 174
Query: 492 CTDVAGTFGYLAPEYFMH---GKVSEKIDVYAFGIVLLELLSGKKPIN 536
+ GT YLAPE + + +D ++ G++L LSG P +
Sbjct: 175 ---LCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFS 219
>pdb|2YCF|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1531
Length = 322
Score = 70.5 bits (171), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 52/168 (30%), Positives = 87/168 (51%), Gaps = 17/168 (10%)
Query: 375 SEIEIITALHHRNIISLFGFCFEDNNLLLVYDFLSRGSLEENLHGNKKDGNAFGWTERYK 434
+EIEI+ L+H II + F F+ + +V + + G L + + GNK+ A Y+
Sbjct: 64 TEIEILKKLNHPCIIKIKNF-FDAEDYYIVLELMEGGELFDKVVGNKRLKEATCKLYFYQ 122
Query: 435 VAVGVAEALDYLHNSCEQPVIHKDVKSSNILLS---DDFEPQLSDFGLASWLSTSSSHLT 491
+ + A+ YLH E +IH+D+K N+LLS +D +++DFG + L +S T
Sbjct: 123 MLL----AVQYLH---ENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGETSLMRT 175
Query: 492 CTDVAGTFGYLAPEYFMH---GKVSEKIDVYAFGIVLLELLSGKKPIN 536
+ GT YLAPE + + +D ++ G++L LSG P +
Sbjct: 176 ---LCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFS 220
>pdb|2IVV|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain Complexed With The Inhibitor Pp1
Length = 314
Score = 70.1 bits (170), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 54/218 (24%), Positives = 105/218 (48%), Gaps = 40/218 (18%)
Query: 337 YLVGKGGHSHVYRGCLPDGKELAVKILK----PSEDVLKEFASEIEIITALHHRNIISLF 392
+L G+ G++ V AVK+LK PSE L++ SE ++ ++H ++I L+
Sbjct: 46 HLKGRAGYTTV-----------AVKMLKENASPSE--LRDLLSEFNVLKQVNHPHVIKLY 92
Query: 393 GFCFEDNNLLLVYDFLSRGSLEENLHGNKK--------------------DGNAFGWTER 432
G C +D LLL+ ++ GSL L ++K D A +
Sbjct: 93 GACSQDGPLLLIVEYAKYGSLRGFLRESRKVGPGYLGSGGSRNSSSLDHPDERALTMGDL 152
Query: 433 YKVAVGVAEALDYLHNSCEQPVIHKDVKSSNILLSDDFEPQLSDFGLASWLSTSSSHLTC 492
A +++ + YL E ++H+D+ + NIL+++ + ++SDFGL+ + S +
Sbjct: 153 ISFAWQISQGMQYL---AEMSLVHRDLAARNILVAEGRKMKISDFGLSRDVYEEDSXVKR 209
Query: 493 TDVAGTFGYLAPEYFMHGKVSEKIDVYAFGIVLLELLS 530
+ ++A E + + DV++FG++L E+++
Sbjct: 210 SQGRIPVKWMAIESLFDHIYTTQSDVWSFGVLLWEIVT 247
>pdb|2YCR|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv976
Length = 323
Score = 70.1 bits (170), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 52/168 (30%), Positives = 87/168 (51%), Gaps = 17/168 (10%)
Query: 375 SEIEIITALHHRNIISLFGFCFEDNNLLLVYDFLSRGSLEENLHGNKKDGNAFGWTERYK 434
+EIEI+ L+H II + F F+ + +V + + G L + + GNK+ A Y+
Sbjct: 64 TEIEILKKLNHPCIIKIKNF-FDAEDYYIVLELMEGGELFDKVVGNKRLKEATCKLYFYQ 122
Query: 435 VAVGVAEALDYLHNSCEQPVIHKDVKSSNILLS---DDFEPQLSDFGLASWLSTSSSHLT 491
+ + A+ YLH E +IH+D+K N+LLS +D +++DFG + L +S T
Sbjct: 123 MLL----AVQYLH---ENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGETSLMRT 175
Query: 492 CTDVAGTFGYLAPEYFMH---GKVSEKIDVYAFGIVLLELLSGKKPIN 536
+ GT YLAPE + + +D ++ G++L LSG P +
Sbjct: 176 ---LCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFS 220
>pdb|1LUF|A Chain A, Crystal Structure Of The Musk Tyrosine Kinase: Insights
Into Receptor Autoregulation
Length = 343
Score = 70.1 bits (170), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 68/296 (22%), Positives = 131/296 (44%), Gaps = 48/296 (16%)
Query: 339 VGKGGHSHVYR----GCLP--DGKELAVKILK--PSEDVLKEFASEIEIITALHHRNIIS 390
+G+G V++ G LP +AVK+LK S D+ +F E ++ + NI+
Sbjct: 55 IGEGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEASADMQADFQREAALMAEFDNPNIVK 114
Query: 391 LFGFCFEDNNLLLVYDFLSRGSLEENLHG--------------------NKKDGNAFGWT 430
L G C + L++++++ G L E L +
Sbjct: 115 LLGVCAVGKPMCLLFEYMAYGDLNEFLRSMSPHTVCSLSHSDLSTRARVSSPGPPPLSCA 174
Query: 431 ERYKVAVGVAEALDYLHNSCEQPVIHKDVKSSNILLSDDFEPQLSDFGLASWLSTSSSHL 490
E+ +A VA + YL E+ +H+D+ + N L+ ++ +++DFGL+ + ++ +
Sbjct: 175 EQLCIARQVAAGMAYLS---ERKFVHRDLATRNCLVGENMVVKIADFGLSRNIYSADYYK 231
Query: 491 TCTDVAGTFGYLAPEYFMHGKVSEKIDVYAFGIVLLELLS-GKKPINSENPKGQESLVMW 549
+ A ++ PE + + + + DV+A+G+VL E+ S G +P E ++ +
Sbjct: 232 ADGNDAIPIRWMPPESIFYNRYTTESDVWAYGVVLWEIFSYGLQPYYG---MAHEEVIYY 288
Query: 550 AKPILKDGKVSQLLDPSLDTDYDNDQIERMVLAATLSISRAPTVRPQINLVLKLLQ 605
++DG + L P +N +E L L S+ P RP + ++LQ
Sbjct: 289 ----VRDGNI--LACP------ENCPLELYNL-MRLCWSKLPADRPSFCSIHRILQ 331
>pdb|3CD3|A Chain A, Crystal Structure Of Phosphorylated Human Feline Sarcoma
Viral Oncogene Homologue (V-Fes) In Complex With
Staurosporine And A Consensus Peptide
Length = 377
Score = 70.1 bits (170), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 56/204 (27%), Positives = 95/204 (46%), Gaps = 18/204 (8%)
Query: 339 VGKGGHSHVYRGCL-PDGKELAVKILKPS--EDVLKEFASEIEIITALHHRNIISLFGFC 395
+G+G V+ G L D +AVK + + D+ +F E I+ H NI+ L G C
Sbjct: 122 IGRGNFGEVFSGRLRADNTLVAVKSCRETLPPDLKAKFLQEARILKQYSHPNIVRLIGVC 181
Query: 396 FEDNNLLLVYDFLSRGSLEENLHGNKKDGNAFGWTERYKVAVGVAEALDYLHNSCEQPVI 455
+ + +V + + G L + +G ++ A ++YL + C I
Sbjct: 182 TQKQPIYIVMELVQGGDFLTFL---RTEGARLRVKTLLQMVGDAAAGMEYLESKC---CI 235
Query: 456 HKDVKSSNILLSDDFEPQLSDFGL----ASWLSTSSSHLTCTDVAGTFGYLAPEYFMHGK 511
H+D+ + N L+++ ++SDFG+ A + +S L V T APE +G+
Sbjct: 236 HRDLAARNCLVTEKNVLKISDFGMSREEADGVXAASGGLRQVPVKWT----APEALNYGR 291
Query: 512 VSEKIDVYAFGIVLLELLS-GKKP 534
S + DV++FGI+L E S G P
Sbjct: 292 YSSESDVWSFGILLWETFSLGASP 315
>pdb|2CN5|A Chain A, Crystal Structure Of Human Chk2 In Complex With Adp
pdb|2CN8|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Debromohymenialdisine
pdb|2WTC|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTD|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTI|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTJ|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2XBJ|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2XM8|A Chain A, Co-Crystal Structure Of A Small Molecule Inhibitor Bound
To The Kinase Domain Of Chk2
pdb|2XM9|A Chain A, Structure Of A Small Molecule Inhibitor With The Kinase
Domain Of Chk2
pdb|4A9R|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9S|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9T|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9U|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
Length = 329
Score = 70.1 bits (170), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 52/168 (30%), Positives = 87/168 (51%), Gaps = 17/168 (10%)
Query: 375 SEIEIITALHHRNIISLFGFCFEDNNLLLVYDFLSRGSLEENLHGNKKDGNAFGWTERYK 434
+EIEI+ L+H II + F F+ + +V + + G L + + GNK+ A Y+
Sbjct: 70 TEIEILKKLNHPCIIKIKNF-FDAEDYYIVLELMEGGELFDKVVGNKRLKEATCKLYFYQ 128
Query: 435 VAVGVAEALDYLHNSCEQPVIHKDVKSSNILLS---DDFEPQLSDFGLASWLSTSSSHLT 491
+ + A+ YLH E +IH+D+K N+LLS +D +++DFG + L +S T
Sbjct: 129 MLL----AVQYLH---ENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGETSLMRT 181
Query: 492 CTDVAGTFGYLAPEYFMH---GKVSEKIDVYAFGIVLLELLSGKKPIN 536
+ GT YLAPE + + +D ++ G++L LSG P +
Sbjct: 182 ---LCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFS 226
>pdb|2Y4I|C Chain C, Ksr2-Mek1 Heterodimer
Length = 395
Score = 69.7 bits (169), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 55/204 (26%), Positives = 103/204 (50%), Gaps = 22/204 (10%)
Query: 353 PDGKELAVKIL----KPSEDVLKEFASEIEIITALHHRNIISLFGFCFEDNNLLLVYDFL 408
P G +A K++ KP+ + + E++++ + I+ +G + D + + + +
Sbjct: 91 PSGLVMARKLIHLEIKPA--IRNQIIRELQVLHECNSPYIVGFYGAFYSDGEISICMEHM 148
Query: 409 SRGSLEENLHGNKKDGNAFGWTERY--KVAVGVAEALDYLHNSCEQPVIHKDVKSSNILL 466
GSL++ L KK G E+ KV++ V + L YL + ++H+DVK SNIL+
Sbjct: 149 DGGSLDQVL---KKAGRI---PEQILGKVSIAVIKGLTYLRE--KHKIMHRDVKPSNILV 200
Query: 467 SDDFEPQLSDFGLASWLSTSSSHLTCTDVAGTFGYLAPEYFMHGKVSEKIDVYAFGIVLL 526
+ E +L DFG++ L S ++ GT Y++PE S + D+++ G+ L+
Sbjct: 201 NSRGEIKLCDFGVSGQLIDSMAN----SFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLV 256
Query: 527 ELLSGKKPINSENPKGQESLVMWA 550
E+ G+ PI P +E +M+
Sbjct: 257 EMAVGRYPIPP--PDAKELELMFG 278
>pdb|3RZF|A Chain A, Crystal Structure Of Inhibitor Of Kappab Kinase Beta
(I4122)
Length = 677
Score = 69.7 bits (169), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 62/213 (29%), Positives = 99/213 (46%), Gaps = 27/213 (12%)
Query: 339 VGKGGHSHVYRGCLPD-GKELAVKILKP--SEDVLKEFASEIEIITALHHRNIISLFGFC 395
+G GG +V R D G+++A+K + S + + EI+I+ L+H N++S
Sbjct: 23 LGTGGFGYVLRWIHQDTGEQVAIKQCRQELSPKNRERWCLEIQIMKKLNHPNVVSAREVP 82
Query: 396 -----FEDNNL-LLVYDFLSRGSLEENLHGNKKDGNAFGWTER--YKVAVGVAEALDYLH 447
N+L LL ++ G L + L+ + N G E + ++ AL YLH
Sbjct: 83 DGLQKLAPNDLPLLAMEYCEGGDLRKYLNQFE---NCCGLKEGPIRTLLSDISSALRYLH 139
Query: 448 NSCEQPVIHKDVKSSNILLSDDFEPQ-----LSDFGLASWLSTSSSHLTCTDVAGTFGYL 502
E +IH+D+K NI+L PQ + D G A L CT+ GT YL
Sbjct: 140 ---ENRIIHRDLKPENIVLQPG--PQRLIHKIIDLGYAKELDQGE---LCTEFVGTLQYL 191
Query: 503 APEYFMHGKVSEKIDVYAFGIVLLELLSGKKPI 535
APE K + +D ++FG + E ++G +P
Sbjct: 192 APELLEQKKYTVTVDYWSFGTLAFECITGFRPF 224
>pdb|3QA8|A Chain A, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|B Chain B, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|C Chain C, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|D Chain D, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|E Chain E, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|F Chain F, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|G Chain G, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|H Chain H, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
Length = 676
Score = 69.7 bits (169), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 62/213 (29%), Positives = 99/213 (46%), Gaps = 27/213 (12%)
Query: 339 VGKGGHSHVYRGCLPD-GKELAVKILKP--SEDVLKEFASEIEIITALHHRNIISLFGFC 395
+G GG +V R D G+++A+K + S + + EI+I+ L+H N++S
Sbjct: 22 LGTGGFGYVLRWIHQDTGEQVAIKQCRQELSPKNRERWCLEIQIMKKLNHPNVVSAREVP 81
Query: 396 -----FEDNNL-LLVYDFLSRGSLEENLHGNKKDGNAFGWTER--YKVAVGVAEALDYLH 447
N+L LL ++ G L + L+ + N G E + ++ AL YLH
Sbjct: 82 DGLQKLAPNDLPLLAMEYCEGGDLRKYLNQFE---NCCGLKEGPIRTLLSDISSALRYLH 138
Query: 448 NSCEQPVIHKDVKSSNILLSDDFEPQ-----LSDFGLASWLSTSSSHLTCTDVAGTFGYL 502
E +IH+D+K NI+L PQ + D G A L CT+ GT YL
Sbjct: 139 ---ENRIIHRDLKPENIVLQPG--PQRLIHKIIDLGYAKELDQGE---LCTEFVGTLQYL 190
Query: 503 APEYFMHGKVSEKIDVYAFGIVLLELLSGKKPI 535
APE K + +D ++FG + E ++G +P
Sbjct: 191 APELLEQKKYTVTVDYWSFGTLAFECITGFRPF 223
>pdb|3BKB|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (V- Fes)
pdb|3CBL|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (v- Fes) In Complex With Staurosporine And A
Consensus Peptide
pdb|4E93|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (V- Fes)in Complex With Tae684
Length = 377
Score = 69.7 bits (169), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 56/204 (27%), Positives = 95/204 (46%), Gaps = 18/204 (8%)
Query: 339 VGKGGHSHVYRGCL-PDGKELAVKILKPS--EDVLKEFASEIEIITALHHRNIISLFGFC 395
+G+G V+ G L D +AVK + + D+ +F E I+ H NI+ L G C
Sbjct: 122 IGRGNFGEVFSGRLRADNTLVAVKSCRETLPPDLKAKFLQEARILKQYSHPNIVRLIGVC 181
Query: 396 FEDNNLLLVYDFLSRGSLEENLHGNKKDGNAFGWTERYKVAVGVAEALDYLHNSCEQPVI 455
+ + +V + + G L + +G ++ A ++YL + C I
Sbjct: 182 TQKQPIYIVMELVQGGDFLTFL---RTEGARLRVKTLLQMVGDAAAGMEYLESKC---CI 235
Query: 456 HKDVKSSNILLSDDFEPQLSDFGL----ASWLSTSSSHLTCTDVAGTFGYLAPEYFMHGK 511
H+D+ + N L+++ ++SDFG+ A + +S L V T APE +G+
Sbjct: 236 HRDLAARNCLVTEKNVLKISDFGMSREEADGVYAASGGLRQVPVKWT----APEALNYGR 291
Query: 512 VSEKIDVYAFGIVLLELLS-GKKP 534
S + DV++FGI+L E S G P
Sbjct: 292 YSSESDVWSFGILLWETFSLGASP 315
>pdb|2H6D|A Chain A, Protein Kinase Domain Of The Human 5'-Amp-Activated
Protein Kinase Catalytic Subunit Alpha-2 (Ampk Alpha-2
Chain)
Length = 276
Score = 69.7 bits (169), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 53/193 (27%), Positives = 97/193 (50%), Gaps = 21/193 (10%)
Query: 355 GKELAVKILKP----SEDVLKEFASEIEIITALHHRNIISLFGFCFEDNNLLLVYDFLSR 410
G ++AVKIL S DV+ + EI+ + H +II L+ + +V +++S
Sbjct: 36 GHKVAVKILNRQKIRSLDVVGKIKREIQNLKLFRHPHIIKLYQVISTPTDFFMVMEYVSG 95
Query: 411 GSLEENL--HGNKKDGNAFGWTERYKVAVGVAEALDYLHNSCEQPVIHKDVKSSNILLSD 468
G L + + HG ++ E ++ + A+DY H V+H+D+K N+LL
Sbjct: 96 GELFDYICKHGRVEE------MEARRLFQQILSAVDYCHRHM---VVHRDLKPENVLLDA 146
Query: 469 DFEPQLSDFGLASWLSTSSSHLTCTDVAGTFGYLAPEYFMHGKV--SEKIDVYAFGIVLL 526
+++DFGL++ +S T G+ Y APE + G++ ++D+++ G++L
Sbjct: 147 HMNAKIADFGLSNMMSDGEFLRTS---CGSPNYAAPE-VISGRLYAGPEVDIWSCGVILY 202
Query: 527 ELLSGKKPINSEN 539
LL G P + E+
Sbjct: 203 ALLCGTLPFDDEH 215
>pdb|3LCD|A Chain A, Inhibitor Bound To A Dfg-In Structure Of The Kinase Domain
Of Csf-1r
Length = 329
Score = 69.7 bits (169), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 49/183 (26%), Positives = 94/183 (51%), Gaps = 12/183 (6%)
Query: 357 ELAVKILKPSE--DVLKEFASEIEIITAL-HHRNIISLFGFCFEDNNLLLVYDFLSRGSL 413
++AVK+LK + D + SE++I++ L H NI++L G C +L++ ++ G L
Sbjct: 78 KVAVKMLKSTAHADEKEALMSELKIMSHLGQHENIVNLLGACTHGGPVLVITEYCCYGDL 137
Query: 414 EENLHG------NKKDGNAFGWTERYKVAVGVAEALDYLHNSCEQPVIHKDVKSSNILLS 467
L +K+DG + + VA+ + +L + IH+DV + N+LL+
Sbjct: 138 LNFLRRKAEADLDKEDGRPLELRDLLHFSSQVAQGMAFL---ASKNCIHRDVAARNVLLT 194
Query: 468 DDFEPQLSDFGLASWLSTSSSHLTCTDVAGTFGYLAPEYFMHGKVSEKIDVYAFGIVLLE 527
+ ++ DFGLA + S+++ + ++APE + + DV+++GI+L E
Sbjct: 195 NGHVAKIGDFGLARDIMNDSNYIVKGNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWE 254
Query: 528 LLS 530
+ S
Sbjct: 255 IFS 257
>pdb|2W4O|A Chain A, Crystal Structure Of Human Camk4 In Complex With 4-Amino(
Sulfamoyl-Phenylamino)-Triazole-Carbothioic Acid (2,6-
Difluoro-Phenyl)-Amide)
Length = 349
Score = 69.7 bits (169), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 65/222 (29%), Positives = 102/222 (45%), Gaps = 28/222 (12%)
Query: 329 ATSNFLP-EYLVGKGGHSHVYRGCLPDG--KELAVKILKPSEDVLKEFASEIEIITALHH 385
A S+F E +G+G S VYR C G K A+K+LK + D K +EI ++ L H
Sbjct: 50 ALSDFFEVESELGRGATSIVYR-CKQKGTQKPYALKVLKKTVDK-KIVRTEIGVLLRLSH 107
Query: 386 RNIISLFGFCFEDNNLLLVYDFLSRGSL-----EENLHGNKKDGNAFGWTERYKVAVGVA 440
NII L + LV + ++ G L E+ + + +A +
Sbjct: 108 PNIIKLKEIFETPTEISLVLELVTGGELFDRIVEKGYYSERDAADAVK---------QIL 158
Query: 441 EALDYLHNSCEQPVIHKDVKSSNILLSD---DFEPQLSDFGLASWLSTSSSHLTCTDVAG 497
EA+ YLH E ++H+D+K N+L + D +++DFGL+ + V G
Sbjct: 159 EAVAYLH---ENGIVHRDLKPENLLYATPAPDAPLKIADFGLSK---IVEHQVLMKTVCG 212
Query: 498 TFGYLAPEYFMHGKVSEKIDVYAFGIVLLELLSGKKPINSEN 539
T GY APE ++D+++ GI+ LL G +P E
Sbjct: 213 TPGYCAPEILRGCAYGPEVDMWSVGIITYILLCGFEPFYDER 254
>pdb|2OGV|A Chain A, Crystal Structure Of The Autoinhibited Human C-Fms Kinase
Domain
Length = 317
Score = 69.7 bits (169), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 49/183 (26%), Positives = 94/183 (51%), Gaps = 12/183 (6%)
Query: 357 ELAVKILKPSE--DVLKEFASEIEIITAL-HHRNIISLFGFCFEDNNLLLVYDFLSRGSL 413
++AVK+LK + D + SE++I++ L H NI++L G C +L++ ++ G L
Sbjct: 70 KVAVKMLKSTAHADEKEALMSELKIMSHLGQHENIVNLLGACTHGGPVLVITEYCCYGDL 129
Query: 414 EENLHG------NKKDGNAFGWTERYKVAVGVAEALDYLHNSCEQPVIHKDVKSSNILLS 467
L +K+DG + + VA+ + +L + IH+DV + N+LL+
Sbjct: 130 LNFLRRKAEADLDKEDGRPLELRDLLHFSSQVAQGMAFL---ASKNCIHRDVAARNVLLT 186
Query: 468 DDFEPQLSDFGLASWLSTSSSHLTCTDVAGTFGYLAPEYFMHGKVSEKIDVYAFGIVLLE 527
+ ++ DFGLA + S+++ + ++APE + + DV+++GI+L E
Sbjct: 187 NGHVAKIGDFGLARDIMNDSNYIVKGNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWE 246
Query: 528 LLS 530
+ S
Sbjct: 247 IFS 249
>pdb|3MFR|A Chain A, Cask-4m Cam Kinase Domain, Native
pdb|3MFS|A Chain A, Cask-4m Cam Kinase Domain, Amppnp
pdb|3MFT|A Chain A, Cask-4m Cam Kinase Domain, Mn2+
pdb|3MFU|A Chain A, Cask-4m Cam Kinase Domain, Amppnp-Mn2+
Length = 351
Score = 69.7 bits (169), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 64/225 (28%), Positives = 100/225 (44%), Gaps = 25/225 (11%)
Query: 338 LVGKGGHSHVYRGCL--PDGKELAVKILKPSEDVLK----------EFASEIEIITALHH 385
++GKG S V R C+ G++ AVKI+ DV K + E I L H
Sbjct: 31 VIGKGAFS-VVRRCINRETGQQFAVKIV----DVAKFTSSPGLSTEDLKREASICHMLKH 85
Query: 386 RNIISLFGFCFEDNNLLLVYDFLSRGSLEENLHGNKKDGNAFGWTERYKVAVGVAEALDY 445
+I+ L D L +V++F+ L + G + + EAL Y
Sbjct: 86 PHIVELLETYSSDGMLYMVFEFMDGADLCFEIVKRADAGFVYSEAVASHYMRQILEALRY 145
Query: 446 LHNSCEQPVIHKDVKSSNILLS--DDFEP-QLSDFGLASWLSTSSSHLTCTDVAGTFGYL 502
H++ +IH+DVK N+LL+ ++ P +L DFG+A L S L GT ++
Sbjct: 146 CHDN---NIIHRDVKPENVLLASKENSAPVKLGDFGVAIQLGESG--LVAGGRVGTPHFM 200
Query: 503 APEYFMHGKVSEKIDVYAFGIVLLELLSGKKPINSENPKGQESLV 547
APE + +DV+ G++L LLSG P + E ++
Sbjct: 201 APEVVKREPYGKPVDVWGCGVILFILLSGCLPFYGTKERLFEGII 245
>pdb|2A19|B Chain B, Pkr Kinase Domain- Eif2alpha- Amp-Pnp Complex.
pdb|2A19|C Chain C, Pkr Kinase Domain- Eif2alpha- Amp-Pnp Complex.
pdb|2A1A|B Chain B, Pkr Kinase Domain-Eif2alpha Complex
Length = 284
Score = 69.3 bits (168), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 53/210 (25%), Positives = 99/210 (47%), Gaps = 30/210 (14%)
Query: 338 LVGKGGHSHVYRGC-LPDGKELAVKILKPSEDVLKEFASEIEIITALHHRNIISLFGFCF 396
L+G GG V++ DGK +K +K + + + E++ + L H NI+ G C+
Sbjct: 18 LIGSGGFGQVFKAKHRIDGKTYVIKRVKYNNE---KAEREVKALAKLDHVNIVHYNG-CW 73
Query: 397 EDNN-----------------LLLVYDFLSRGSLEENLHGNKKDGNAFGWTERYKVAVGV 439
+ + L + +F +G+LE+ + K+ G ++ +
Sbjct: 74 DGFDYDPETSSKNSSRSKTKCLFIQMEFCDKGTLEQWIE--KRRGEKLDKVLALELFEQI 131
Query: 440 AEALDYLHNSCEQPVIHKDVKSSNILLSDDFEPQLSDFGLASWLSTSSSHLTCTDVAGTF 499
+ +DY+H+ + +I++D+K SNI L D + ++ DFGL + L GT
Sbjct: 132 TKGVDYIHS---KKLINRDLKPSNIFLVDTKQVKIGDFGLVTSLKNDGKRXRS---KGTL 185
Query: 500 GYLAPEYFMHGKVSEKIDVYAFGIVLLELL 529
Y++PE +++D+YA G++L ELL
Sbjct: 186 RYMSPEQISSQDYGKEVDLYALGLILAELL 215
>pdb|3ORN|A Chain A, Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In
Complex With Ch4987655 And Mgamp-Pnp
pdb|3OS3|A Chain A, Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In
Complex With Ch4858061 And Mgatp
Length = 307
Score = 69.3 bits (168), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 53/195 (27%), Positives = 99/195 (50%), Gaps = 20/195 (10%)
Query: 353 PDGKELAVKIL----KPSEDVLKEFASEIEIITALHHRNIISLFGFCFEDNNLLLVYDFL 408
P G +A K++ KP+ + + E++++ + I+ +G + D + + + +
Sbjct: 29 PSGLVMARKLIHLEIKPA--IRNQIIRELQVLHECNSPYIVGFYGAFYSDGEISICMEHM 86
Query: 409 SRGSLEENLHGNKKDGNAFGWTERY--KVAVGVAEALDYLHNSCEQPVIHKDVKSSNILL 466
GSL++ L KK G E+ KV++ V + L YL + ++H+DVK SNIL+
Sbjct: 87 DGGSLDQVL---KKAGRI---PEQILGKVSIAVIKGLTYLRE--KHKIMHRDVKPSNILV 138
Query: 467 SDDFEPQLSDFGLASWLSTSSSHLTCTDVAGTFGYLAPEYFMHGKVSEKIDVYAFGIVLL 526
+ E +L DFG++ L S ++ GT Y++PE S + D+++ G+ L+
Sbjct: 139 NSRGEIKLCDFGVSGQLIDSMAN----SFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLV 194
Query: 527 ELLSGKKPINSENPK 541
E+ G+ PI + K
Sbjct: 195 EMAVGRYPIPPPDAK 209
>pdb|1S9J|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3DY7|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3E8N|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) Complexed With A Potent Inhibitor
Rdea119 And Mgatp
pdb|3V01|A Chain A, Discovery Of Novel Allosteric Mek Inhibitors Possessing
Classical And Non-Classical Bidentate Ser212
Interactions.
pdb|3V04|A Chain A, Discovery Of Novel Allosteric Mek Inhibitors Possessing
Classical And Non-Classical Bidentate Ser212
Interactions
Length = 341
Score = 69.3 bits (168), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 53/195 (27%), Positives = 99/195 (50%), Gaps = 20/195 (10%)
Query: 353 PDGKELAVKIL----KPSEDVLKEFASEIEIITALHHRNIISLFGFCFEDNNLLLVYDFL 408
P G +A K++ KP+ + + E++++ + I+ +G + D + + + +
Sbjct: 29 PSGLVMARKLIHLEIKPA--IRNQIIRELQVLHECNSPYIVGFYGAFYSDGEISICMEHM 86
Query: 409 SRGSLEENLHGNKKDGNAFGWTERY--KVAVGVAEALDYLHNSCEQPVIHKDVKSSNILL 466
GSL++ L KK G E+ KV++ V + L YL + ++H+DVK SNIL+
Sbjct: 87 DGGSLDQVL---KKAGRI---PEQILGKVSIAVIKGLTYLRE--KHKIMHRDVKPSNILV 138
Query: 467 SDDFEPQLSDFGLASWLSTSSSHLTCTDVAGTFGYLAPEYFMHGKVSEKIDVYAFGIVLL 526
+ E +L DFG++ L S ++ GT Y++PE S + D+++ G+ L+
Sbjct: 139 NSRGEIKLCDFGVSGQLIDSMAN----SFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLV 194
Query: 527 ELLSGKKPINSENPK 541
E+ G+ PI + K
Sbjct: 195 EMAVGRYPIPPPDAK 209
>pdb|2P55|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3EQB|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
Length = 333
Score = 69.3 bits (168), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 53/195 (27%), Positives = 99/195 (50%), Gaps = 20/195 (10%)
Query: 353 PDGKELAVKIL----KPSEDVLKEFASEIEIITALHHRNIISLFGFCFEDNNLLLVYDFL 408
P G +A K++ KP+ + + E++++ + I+ +G + D + + + +
Sbjct: 29 PSGLVMARKLIHLEIKPA--IRNQIIRELQVLHECNSPYIVGFYGAFYSDGEISICMEHM 86
Query: 409 SRGSLEENLHGNKKDGNAFGWTERY--KVAVGVAEALDYLHNSCEQPVIHKDVKSSNILL 466
GSL++ L KK G E+ KV++ V + L YL + ++H+DVK SNIL+
Sbjct: 87 DGGSLDQVL---KKAGRI---PEQILGKVSIAVIKGLTYLRE--KHKIMHRDVKPSNILV 138
Query: 467 SDDFEPQLSDFGLASWLSTSSSHLTCTDVAGTFGYLAPEYFMHGKVSEKIDVYAFGIVLL 526
+ E +L DFG++ L S ++ GT Y++PE S + D+++ G+ L+
Sbjct: 139 NSRGEIKLCDFGVSGQLIDSMAN----SFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLV 194
Query: 527 ELLSGKKPINSENPK 541
E+ G+ PI + K
Sbjct: 195 EMAVGRYPIPPPDAK 209
>pdb|3EQC|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Ternary Complex With
Compound 1, Atp-Gs And Mg2p
pdb|3EQD|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With Atp-Gs
And Mg2p
pdb|3EQF|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With K252a
And Mg2p
pdb|3EQG|A Chain A, X-ray Structure Of The Human Mitogen-activated Protein
Kinase Kinase 1 (mek1) In A Ternary Complex With Pd, Adp
And Mg2p
pdb|3EQH|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Ternary Complex With U0126,
Adp And Mg2p
pdb|3EQI|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With Adp And
Mg2p
Length = 360
Score = 69.3 bits (168), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 53/195 (27%), Positives = 99/195 (50%), Gaps = 20/195 (10%)
Query: 353 PDGKELAVKIL----KPSEDVLKEFASEIEIITALHHRNIISLFGFCFEDNNLLLVYDFL 408
P G +A K++ KP+ + + E++++ + I+ +G + D + + + +
Sbjct: 56 PSGLVMARKLIHLEIKPA--IRNQIIRELQVLHECNSPYIVGFYGAFYSDGEISICMEHM 113
Query: 409 SRGSLEENLHGNKKDGNAFGWTERY--KVAVGVAEALDYLHNSCEQPVIHKDVKSSNILL 466
GSL++ L KK G E+ KV++ V + L YL + ++H+DVK SNIL+
Sbjct: 114 DGGSLDQVL---KKAGRI---PEQILGKVSIAVIKGLTYLRE--KHKIMHRDVKPSNILV 165
Query: 467 SDDFEPQLSDFGLASWLSTSSSHLTCTDVAGTFGYLAPEYFMHGKVSEKIDVYAFGIVLL 526
+ E +L DFG++ L S ++ GT Y++PE S + D+++ G+ L+
Sbjct: 166 NSRGEIKLCDFGVSGQLIDSMAN----SFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLV 221
Query: 527 ELLSGKKPINSENPK 541
E+ G+ PI + K
Sbjct: 222 EMAVGRYPIPPPDAK 236
>pdb|3Q6U|A Chain A, Structure Of The Apo Met Receptor Kinase In The
Dually-Phosphorylated, Activated State
Length = 308
Score = 69.3 bits (168), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 58/211 (27%), Positives = 100/211 (47%), Gaps = 25/211 (11%)
Query: 338 LVGKGGHSHVYRGCL--PDGKEL--AVKILKPSEDV--LKEFASEIEIITALHHRNIISL 391
++G+G VY G L DGK++ AVK L D+ + +F +E I+ H N++SL
Sbjct: 37 VIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSL 96
Query: 392 FGFCFE-DNNLLLVYDFLSRGSLE-----ENLHGNKKDGNAFGWTERYKVAVGVAEALDY 445
G C + + L+V ++ G L E + KD FG + VA+ + Y
Sbjct: 97 LGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFG--------LQVAKGMKY 148
Query: 446 LHNSCEQPVIHKDVKSSNILLSDDFEPQLSDFGLASWLSTSSSHLTCTDVAGTF--GYLA 503
L + +H+D+ + N +L + F +++DFGLA + + ++A
Sbjct: 149 L---ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMA 205
Query: 504 PEYFMHGKVSEKIDVYAFGIVLLELLSGKKP 534
E K + K DV++FG++L EL++ P
Sbjct: 206 LESLQTQKFTTKSDVWSFGVLLWELMTRGAP 236
>pdb|3Q6W|A Chain A, Structure Of Dually-phosphorylated Met Receptor Kinase In
Complex With An Mk-2461 Analog With Specificity For The
Activated Receptor
pdb|3R7O|A Chain A, Structure Of Dually Phosphorylated C-Met Receptor Kinase
In Complex With An Mk-2461 Analog
Length = 307
Score = 68.9 bits (167), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 61/212 (28%), Positives = 102/212 (48%), Gaps = 27/212 (12%)
Query: 338 LVGKGGHSHVYRGCL--PDGKEL--AVKILKPSEDV--LKEFASEIEIITALHHRNIISL 391
++G+G VY G L DGK++ AVK L D+ + +F +E I+ H N++SL
Sbjct: 36 VIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSL 95
Query: 392 FGFCFE-DNNLLLVYDFLSRGSLE-----ENLHGNKKDGNAFGWTERYKVAVGVAEALDY 445
G C + + L+V ++ G L E + KD FG + VA+ + Y
Sbjct: 96 LGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFG--------LQVAKGMKY 147
Query: 446 LHNSCEQPVIHKDVKSSNILLSDDFEPQLSDFGLASWL---STSSSHLTCTDVAGTFGYL 502
L + +H+D+ + N +L + F +++DFGLA + S H T ++
Sbjct: 148 L---ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEXXSVH-NKTGAKLPVKWM 203
Query: 503 APEYFMHGKVSEKIDVYAFGIVLLELLSGKKP 534
A E K + K DV++FG++L EL++ P
Sbjct: 204 ALESLQTQKFTTKSDVWSFGVLLWELMTRGAP 235
>pdb|3MBL|A Chain A, Crystal Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek 1) In Complex With Ligand And Mgadp
pdb|3PP1|A Chain A, Crystal Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek 1) In Complex With Ligand And Mgatp
Length = 328
Score = 68.9 bits (167), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 53/195 (27%), Positives = 99/195 (50%), Gaps = 20/195 (10%)
Query: 353 PDGKELAVKIL----KPSEDVLKEFASEIEIITALHHRNIISLFGFCFEDNNLLLVYDFL 408
P G +A K++ KP+ + + E++++ + I+ +G + D + + + +
Sbjct: 29 PSGLVMARKLIHLEIKPA--IRNQIIRELQVLHECNSPYIVGFYGAFYSDGEISICMEHM 86
Query: 409 SRGSLEENLHGNKKDGNAFGWTERY--KVAVGVAEALDYLHNSCEQPVIHKDVKSSNILL 466
GSL++ L KK G E+ KV++ V + L YL + ++H+DVK SNIL+
Sbjct: 87 DGGSLDQVL---KKAGRI---PEQILGKVSIAVIKGLTYLRE--KHKIMHRDVKPSNILV 138
Query: 467 SDDFEPQLSDFGLASWLSTSSSHLTCTDVAGTFGYLAPEYFMHGKVSEKIDVYAFGIVLL 526
+ E +L DFG++ L S ++ GT Y++PE S + D+++ G+ L+
Sbjct: 139 NSRGEIKLCDFGVSGQLIDSMAN----SFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLV 194
Query: 527 ELLSGKKPINSENPK 541
E+ G+ PI + K
Sbjct: 195 EMAVGRYPIPPPDAK 209
>pdb|3DV3|A Chain A, Mek1 With Pf-04622664 Bound
Length = 322
Score = 68.9 bits (167), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 53/195 (27%), Positives = 99/195 (50%), Gaps = 20/195 (10%)
Query: 353 PDGKELAVKIL----KPSEDVLKEFASEIEIITALHHRNIISLFGFCFEDNNLLLVYDFL 408
P G +A K++ KP+ + + E++++ + I+ +G + D + + + +
Sbjct: 29 PSGLVMARKLIHLEIKPA--IRNQIIRELQVLHECNSPYIVGFYGAFYSDGEISICMEHM 86
Query: 409 SRGSLEENLHGNKKDGNAFGWTERY--KVAVGVAEALDYLHNSCEQPVIHKDVKSSNILL 466
GSL++ L KK G E+ KV++ V + L YL + ++H+DVK SNIL+
Sbjct: 87 DGGSLDQVL---KKAGRI---PEQILGKVSIAVIKGLTYLRE--KHKIMHRDVKPSNILV 138
Query: 467 SDDFEPQLSDFGLASWLSTSSSHLTCTDVAGTFGYLAPEYFMHGKVSEKIDVYAFGIVLL 526
+ E +L DFG++ L S ++ GT Y++PE S + D+++ G+ L+
Sbjct: 139 NSRGEIKLCDFGVSGQLIDSMAN----SFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLV 194
Query: 527 ELLSGKKPINSENPK 541
E+ G+ PI + K
Sbjct: 195 EMAVGRYPIPPPDAK 209
>pdb|4GG5|A Chain A, Crystal Structure Of Cmet In Complex With Novel Inhibitor
pdb|4GG7|A Chain A, Crystal Structure Of Cmet In Complex With Novel Inhibitor
Length = 319
Score = 68.9 bits (167), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 58/211 (27%), Positives = 100/211 (47%), Gaps = 25/211 (11%)
Query: 338 LVGKGGHSHVYRGCL--PDGKEL--AVKILKPSEDV--LKEFASEIEIITALHHRNIISL 391
++G+G VY G L DGK++ AVK L D+ + +F +E I+ H N++SL
Sbjct: 56 VIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSL 115
Query: 392 FGFCFE-DNNLLLVYDFLSRGSLE-----ENLHGNKKDGNAFGWTERYKVAVGVAEALDY 445
G C + + L+V ++ G L E + KD FG + VA+ + Y
Sbjct: 116 LGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFG--------LQVAKGMKY 167
Query: 446 LHNSCEQPVIHKDVKSSNILLSDDFEPQLSDFGLASWLSTSSSHLTCTDVAGTF--GYLA 503
L + +H+D+ + N +L + F +++DFGLA + + ++A
Sbjct: 168 L---ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMA 224
Query: 504 PEYFMHGKVSEKIDVYAFGIVLLELLSGKKP 534
E K + K DV++FG++L EL++ P
Sbjct: 225 LESLQTQKFTTKSDVWSFGVLLWELMTRGAP 255
>pdb|1OMW|A Chain A, Crystal Structure Of The Complex Between G Protein-Coupled
Receptor Kinase 2 And Heterotrimeric G Protein Beta 1
And Gamma 2 Subunits
pdb|1YM7|A Chain A, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|B Chain B, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|C Chain C, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|D Chain D, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|2BCJ|A Chain A, Crystal Structure Of G Protein-coupled Receptor Kinase 2
In Complex With Galpha-q And Gbetagamma Subunits
pdb|3UZS|A Chain A, Structure Of The C13.28 Rna Aptamer Bound To The G
Protein-Coupled Receptor Kinase 2-Heterotrimeric G
Protein Beta 1 And Gamma 2 Subunit Complex
pdb|3UZT|A Chain A, Structure Of The C13.18 Rna Aptamer In Complex With G
Protein-Coupled Receptor Kinase 2
Length = 689
Score = 68.9 bits (167), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 64/251 (25%), Positives = 110/251 (43%), Gaps = 33/251 (13%)
Query: 312 ERYSSTCRLFSYQELLSATSN-FLPEYLVGKGGHSHVYRGCLP--DGKELAVKILKPSED 368
++++ C+ + + + T N F ++G+GG VY GC GK A+K L
Sbjct: 169 DKFTRFCQWKNVELNIHLTMNDFSVHRIIGRGGFGEVY-GCRKADTGKMYAMKCLDKKRI 227
Query: 369 VLKEFASEIEIITALHHRNIISL-------FGFCFE-----DNNLLLVYDFLSRGSLEEN 416
+K+ + AL+ R ++SL F C + L + D ++ G +
Sbjct: 228 KMKQGET-----LALNERIMLSLVSTGDCPFIVCMSYAFHTPDKLSFILDLMNGG----D 278
Query: 417 LHGNKKDGNAFGWTERYKVAVGVAEALDYLHNSCEQPVIHKDVKSSNILLSDDFEPQLSD 476
LH + F + A + L+++HN V+++D+K +NILL + ++SD
Sbjct: 279 LHYHLSQHGVFSEADMRFYAAEIILGLEHMHNRF---VVYRDLKPANILLDEHGHVRISD 335
Query: 477 FGLASWLSTSSSHLTCTDVAGTFGYLAPEYFMHGKVSE-KIDVYAFGIVLLELLSGKKPI 535
GLA S H + GT GY+APE G + D ++ G +L +LL G P
Sbjct: 336 LGLACDFSKKKPHAS----VGTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSPF 391
Query: 536 NSENPKGQESL 546
K + +
Sbjct: 392 RQHKTKDKHEI 402
>pdb|3PSC|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits
pdb|3PVU|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits And A
Selective Kinase Inhibitor (Cmpd101)
pdb|3PVW|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits And A
Selective Kinase Inhibitor (Cmpd103a)
Length = 695
Score = 68.9 bits (167), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 64/251 (25%), Positives = 110/251 (43%), Gaps = 33/251 (13%)
Query: 312 ERYSSTCRLFSYQELLSATSN-FLPEYLVGKGGHSHVYRGCLP--DGKELAVKILKPSED 368
++++ C+ + + + T N F ++G+GG VY GC GK A+K L
Sbjct: 169 DKFTRFCQWKNVELNIHLTMNDFSVHRIIGRGGFGEVY-GCRKADTGKMYAMKCLDKKRI 227
Query: 369 VLKEFASEIEIITALHHRNIISL-------FGFCFE-----DNNLLLVYDFLSRGSLEEN 416
+K+ + AL+ R ++SL F C + L + D ++ G +
Sbjct: 228 KMKQGET-----LALNERIMLSLVSTGDCPFIVCMSYAFHTPDKLSFILDLMNGG----D 278
Query: 417 LHGNKKDGNAFGWTERYKVAVGVAEALDYLHNSCEQPVIHKDVKSSNILLSDDFEPQLSD 476
LH + F + A + L+++HN V+++D+K +NILL + ++SD
Sbjct: 279 LHYHLSQHGVFSEADMRFYAAEIILGLEHMHNRF---VVYRDLKPANILLDEHGHVRISD 335
Query: 477 FGLASWLSTSSSHLTCTDVAGTFGYLAPEYFMHGKVSE-KIDVYAFGIVLLELLSGKKPI 535
GLA S H + GT GY+APE G + D ++ G +L +LL G P
Sbjct: 336 LGLACDFSKKKPHAS----VGTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSPF 391
Query: 536 NSENPKGQESL 546
K + +
Sbjct: 392 RQHKTKDKHEI 402
>pdb|3KRW|A Chain A, Human Grk2 In Complex With Gbetgamma Subunits And Balanol
(Soak)
pdb|3KRX|A Chain A, Human Grk2 In Complex With Gbetgamma Subunits And Balanol
(Co-Crystal)
Length = 688
Score = 68.9 bits (167), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 64/251 (25%), Positives = 110/251 (43%), Gaps = 33/251 (13%)
Query: 312 ERYSSTCRLFSYQELLSATSN-FLPEYLVGKGGHSHVYRGCLP--DGKELAVKILKPSED 368
++++ C+ + + + T N F ++G+GG VY GC GK A+K L
Sbjct: 168 DKFTRFCQWKNVELNIHLTMNDFSVHRIIGRGGFGEVY-GCRKADTGKMYAMKCLDKKRI 226
Query: 369 VLKEFASEIEIITALHHRNIISL-------FGFCFE-----DNNLLLVYDFLSRGSLEEN 416
+K+ + AL+ R ++SL F C + L + D ++ G +
Sbjct: 227 KMKQGET-----LALNERIMLSLVSTGDCPFIVCMSYAFHTPDKLSFILDLMNGG----D 277
Query: 417 LHGNKKDGNAFGWTERYKVAVGVAEALDYLHNSCEQPVIHKDVKSSNILLSDDFEPQLSD 476
LH + F + A + L+++HN V+++D+K +NILL + ++SD
Sbjct: 278 LHYHLSQHGVFSEADMRFYAAEIILGLEHMHNRF---VVYRDLKPANILLDEHGHVRISD 334
Query: 477 FGLASWLSTSSSHLTCTDVAGTFGYLAPEYFMHGKVSE-KIDVYAFGIVLLELLSGKKPI 535
GLA S H + GT GY+APE G + D ++ G +L +LL G P
Sbjct: 335 LGLACDFSKKKPHAS----VGTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSPF 390
Query: 536 NSENPKGQESL 546
K + +
Sbjct: 391 RQHKTKDKHEI 401
>pdb|3I5N|A Chain A, Crystal Structure Of C-Met With Triazolopyridazine
Inhibitor 13
pdb|3U6H|A Chain A, Crystal Structure Of C-Met In Complex With Pyrazolone
Inhibitor 26
pdb|3U6I|A Chain A, Crystal Structure Of C-Met In Complex With Pyrazolone
Inhibitor 58a
pdb|4DEG|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridazine Inhibitor 2
pdb|4DEH|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridinone Inhibitor 3
pdb|4DEI|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridinone Inhibitor 24
Length = 309
Score = 68.9 bits (167), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 58/211 (27%), Positives = 100/211 (47%), Gaps = 25/211 (11%)
Query: 338 LVGKGGHSHVYRGCL--PDGKEL--AVKILKPSEDV--LKEFASEIEIITALHHRNIISL 391
++G+G VY G L DGK++ AVK L D+ + +F +E I+ H N++SL
Sbjct: 36 VIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSL 95
Query: 392 FGFCFE-DNNLLLVYDFLSRGSLE-----ENLHGNKKDGNAFGWTERYKVAVGVAEALDY 445
G C + + L+V ++ G L E + KD FG + VA+ + Y
Sbjct: 96 LGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFG--------LQVAKGMKY 147
Query: 446 LHNSCEQPVIHKDVKSSNILLSDDFEPQLSDFGLASWLSTSSSHLTCTDVAGTF--GYLA 503
L + +H+D+ + N +L + F +++DFGLA + + ++A
Sbjct: 148 L---ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMA 204
Query: 504 PEYFMHGKVSEKIDVYAFGIVLLELLSGKKP 534
E K + K DV++FG++L EL++ P
Sbjct: 205 LESLQTQKFTTKSDVWSFGVLLWELMTRGAP 235
>pdb|2RFN|A Chain A, X-ray Structure Of C-met With Inhibitor.
pdb|2RFN|B Chain B, X-ray Structure Of C-met With Inhibitor.
pdb|2RFS|A Chain A, X-Ray Structure Of Su11274 Bound To C-Met
pdb|3CCN|A Chain A, X-Ray Structure Of C-Met With Triazolopyridazine
Inhibitor.
pdb|3CD8|A Chain A, X-Ray Structure Of C-Met With Triazolopyridazine
Inhibitor.
pdb|3EFJ|A Chain A, Structure Of C-Met With Pyrimidone Inhibitor 7
pdb|3EFJ|B Chain B, Structure Of C-Met With Pyrimidone Inhibitor 7
pdb|3EFK|A Chain A, Structure Of C-Met With Pyrimidone Inhibitor 50
pdb|3EFK|B Chain B, Structure Of C-Met With Pyrimidone Inhibitor 50
Length = 310
Score = 68.9 bits (167), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 58/211 (27%), Positives = 100/211 (47%), Gaps = 25/211 (11%)
Query: 338 LVGKGGHSHVYRGCL--PDGKEL--AVKILKPSEDV--LKEFASEIEIITALHHRNIISL 391
++G+G VY G L DGK++ AVK L D+ + +F +E I+ H N++SL
Sbjct: 37 VIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSL 96
Query: 392 FGFCFE-DNNLLLVYDFLSRGSLE-----ENLHGNKKDGNAFGWTERYKVAVGVAEALDY 445
G C + + L+V ++ G L E + KD FG + VA+ + Y
Sbjct: 97 LGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFG--------LQVAKGMKY 148
Query: 446 LHNSCEQPVIHKDVKSSNILLSDDFEPQLSDFGLASWLSTSSSHLTCTDVAGTF--GYLA 503
L + +H+D+ + N +L + F +++DFGLA + + ++A
Sbjct: 149 L---ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMA 205
Query: 504 PEYFMHGKVSEKIDVYAFGIVLLELLSGKKP 534
E K + K DV++FG++L EL++ P
Sbjct: 206 LESLQTQKFTTKSDVWSFGVLLWELMTRGAP 236
>pdb|3I6U|A Chain A, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6U|B Chain B, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
Length = 419
Score = 68.9 bits (167), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 52/168 (30%), Positives = 87/168 (51%), Gaps = 17/168 (10%)
Query: 375 SEIEIITALHHRNIISLFGFCFEDNNLLLVYDFLSRGSLEENLHGNKKDGNAFGWTERYK 434
+EIEI+ L+H II + F F+ + +V + + G L + + GNK+ A Y+
Sbjct: 189 TEIEILKKLNHPCIIKIKNF-FDAEDYYIVLELMEGGELFDKVVGNKRLKEATCKLYFYQ 247
Query: 435 VAVGVAEALDYLHNSCEQPVIHKDVKSSNILLS---DDFEPQLSDFGLASWLSTSSSHLT 491
+ + A+ YLH E +IH+D+K N+LLS +D +++DFG + L +S T
Sbjct: 248 MLL----AVQYLH---ENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGETSLMRT 300
Query: 492 CTDVAGTFGYLAPEYFMH---GKVSEKIDVYAFGIVLLELLSGKKPIN 536
+ GT YLAPE + + +D ++ G++L LSG P +
Sbjct: 301 ---LCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFS 345
>pdb|2G15|A Chain A, Structural Characterization Of Autoinhibited C-Met Kinase
pdb|3RHK|A Chain A, Crystal Structure Of The Catalytic Domain Of C-Met Kinase
In Complex With Arq 197
pdb|3RHK|B Chain B, Crystal Structure Of The Catalytic Domain Of C-Met Kinase
In Complex With Arq 197
Length = 318
Score = 68.9 bits (167), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 58/211 (27%), Positives = 100/211 (47%), Gaps = 25/211 (11%)
Query: 338 LVGKGGHSHVYRGCL--PDGKEL--AVKILKPSEDV--LKEFASEIEIITALHHRNIISL 391
++G+G VY G L DGK++ AVK L D+ + +F +E I+ H N++SL
Sbjct: 55 VIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSL 114
Query: 392 FGFCFE-DNNLLLVYDFLSRGSLE-----ENLHGNKKDGNAFGWTERYKVAVGVAEALDY 445
G C + + L+V ++ G L E + KD FG + VA+ + Y
Sbjct: 115 LGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFG--------LQVAKGMKY 166
Query: 446 LHNSCEQPVIHKDVKSSNILLSDDFEPQLSDFGLASWLSTSSSHLTCTDVAGTF--GYLA 503
L + +H+D+ + N +L + F +++DFGLA + + ++A
Sbjct: 167 L---ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMA 223
Query: 504 PEYFMHGKVSEKIDVYAFGIVLLELLSGKKP 534
E K + K DV++FG++L EL++ P
Sbjct: 224 LESLQTQKFTTKSDVWSFGVLLWELMTRGAP 254
>pdb|2WD1|A Chain A, Human C-Met Kinase In Complex With Azaindole Inhibitor
Length = 292
Score = 68.9 bits (167), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 58/211 (27%), Positives = 100/211 (47%), Gaps = 25/211 (11%)
Query: 338 LVGKGGHSHVYRGCL--PDGKEL--AVKILKPSEDV--LKEFASEIEIITALHHRNIISL 391
++G+G VY G L DGK++ AVK L D+ + +F +E I+ H N++SL
Sbjct: 29 VIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSL 88
Query: 392 FGFCFE-DNNLLLVYDFLSRGSLE-----ENLHGNKKDGNAFGWTERYKVAVGVAEALDY 445
G C + + L+V ++ G L E + KD FG + VA+ + Y
Sbjct: 89 LGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFG--------LQVAKGMKY 140
Query: 446 LHNSCEQPVIHKDVKSSNILLSDDFEPQLSDFGLASWLSTSSSHLTCTDVAGTF--GYLA 503
L + +H+D+ + N +L + F +++DFGLA + + ++A
Sbjct: 141 L---ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMA 197
Query: 504 PEYFMHGKVSEKIDVYAFGIVLLELLSGKKP 534
E K + K DV++FG++L EL++ P
Sbjct: 198 LESLQTQKFTTKSDVWSFGVLLWELMTRGAP 228
>pdb|1ZYC|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|C Chain C, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|D Chain D, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYD|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type Complexed With Atp.
pdb|1ZYD|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type Complexed With Atp
Length = 303
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 58/231 (25%), Positives = 105/231 (45%), Gaps = 35/231 (15%)
Query: 327 LSATSNFLPEYLVGKGGHSHVY--RGCLPDGKELAVKILKPSEDVLKEFASEIEIITALH 384
L S+F ++G+G V R L D + A+K ++ +E+ L SE+ ++ +L+
Sbjct: 2 LRYASDFEEIAVLGQGAFGQVVKARNAL-DSRYYAIKKIRHTEEKLSTILSEVMLLASLN 60
Query: 385 HRNIISLFGFCFEDNN-------------LLLVYDFLSRGSLEENLHGNKKDGNAFGWTE 431
H+ ++ + E N L + ++ +L + +H + E
Sbjct: 61 HQYVVRYYAAWLERRNFVKPMTAVKKKSTLFIQMEYCENRTLYDLIHSENLNQQR---DE 117
Query: 432 RYKVAVGVAEALDYLHNSCEQPVIHKDVKSSNILLSDDFEPQLSDFGLAS-------WLS 484
+++ + EAL Y+H+ Q +IH+D+K NI + + ++ DFGLA L
Sbjct: 118 YWRLFRQILEALSYIHS---QGIIHRDLKPMNIFIDESRNVKIGDFGLAKNVHRSLDILK 174
Query: 485 TSSSHL-----TCTDVAGTFGYLAPEYF-MHGKVSEKIDVYAFGIVLLELL 529
S +L T GT Y+A E G +EKID+Y+ GI+ E++
Sbjct: 175 LDSQNLPGSSDNLTSAIGTAMYVATEVLDGTGHYNEKIDMYSLGIIFFEMI 225
>pdb|3I6W|A Chain A, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|B Chain B, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|C Chain C, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|D Chain D, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|E Chain E, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|F Chain F, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|G Chain G, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|H Chain H, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
Length = 443
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 52/168 (30%), Positives = 87/168 (51%), Gaps = 17/168 (10%)
Query: 375 SEIEIITALHHRNIISLFGFCFEDNNLLLVYDFLSRGSLEENLHGNKKDGNAFGWTERYK 434
+EIEI+ L+H II + F F+ + +V + + G L + + GNK+ A Y+
Sbjct: 203 TEIEILKKLNHPCIIKIKNF-FDAEDYYIVLELMEGGELFDKVVGNKRLKEATCKLYFYQ 261
Query: 435 VAVGVAEALDYLHNSCEQPVIHKDVKSSNILLS---DDFEPQLSDFGLASWLSTSSSHLT 491
+ + A+ YLH E +IH+D+K N+LLS +D +++DFG + L +S T
Sbjct: 262 MLL----AVQYLH---ENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGETSLMRT 314
Query: 492 CTDVAGTFGYLAPEYFMH---GKVSEKIDVYAFGIVLLELLSGKKPIN 536
+ GT YLAPE + + +D ++ G++L LSG P +
Sbjct: 315 ---LCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFS 359
>pdb|2WGJ|A Chain A, X-Ray Structure Of Pf-02341066 Bound To The Kinase Domain
Of C-Met
pdb|2WKM|A Chain A, X-Ray Structure Of Pha-00665752 Bound To The Kinase Domain
Of C-Met
pdb|3ZXZ|A Chain A, X-Ray Structure Of Pf-04217903 Bound To The Kinase Domain
Of C-Met
pdb|3ZZE|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
N'-
((3z)-4-Chloro-7-Methyl-2-Oxo-1,2-Dihydro-3h-Indol-3-
Ylidene)-2-(4-Hydroxyphenyl)propanohydrazide
pdb|4AOI|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
4-( 3-((1h-
Pyrrolo(2,3-B)pyridin-3-Yl)methyl)-(1,2,4)triazolo(
4,3-B)(1,2,4) Triazin-6-Yl)benzonitrile
pdb|4AP7|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
4-( (6-(4-
Fluorophenyl)-(1,2,4)triazolo(4,3-B)(1,2,
4)triazin-3-Yl)methyl) Phenol
Length = 306
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 58/211 (27%), Positives = 100/211 (47%), Gaps = 25/211 (11%)
Query: 338 LVGKGGHSHVYRGCL--PDGKEL--AVKILKPSEDV--LKEFASEIEIITALHHRNIISL 391
++G+G VY G L DGK++ AVK L D+ + +F +E I+ H N++SL
Sbjct: 34 VIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSL 93
Query: 392 FGFCFE-DNNLLLVYDFLSRGSLE-----ENLHGNKKDGNAFGWTERYKVAVGVAEALDY 445
G C + + L+V ++ G L E + KD FG + VA+ + Y
Sbjct: 94 LGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFG--------LQVAKGMKY 145
Query: 446 LHNSCEQPVIHKDVKSSNILLSDDFEPQLSDFGLASWLSTSSSHLTCTDVAGTF--GYLA 503
L + +H+D+ + N +L + F +++DFGLA + + ++A
Sbjct: 146 L---ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMA 202
Query: 504 PEYFMHGKVSEKIDVYAFGIVLLELLSGKKP 534
E K + K DV++FG++L EL++ P
Sbjct: 203 LESLQTQKFTTKSDVWSFGVLLWELMTRGAP 233
>pdb|1RW8|A Chain A, Crystal Structure Of Tgf-Beta Receptor I Kinase With Atp
Site Inhibitor
Length = 301
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 66/213 (30%), Positives = 96/213 (45%), Gaps = 35/213 (16%)
Query: 339 VGKGGHSHVYRGCLPDGKELAVKILKPSEDVLKEFASEIEIITALHHRNIISLFGFCFED 398
+GKG V+RG G+E+AVKI E+ +EI L H NI+ +D
Sbjct: 12 IGKGRFGEVWRGKW-RGEEVAVKIFSSREERSWFREAEIYQTVMLRHENILGFIAADNKD 70
Query: 399 N----NLLLVYDFLSRGSLEENLHGNKKDGNAFGWTERYKVAVGVAEALDYLH----NSC 450
N L LV D+ GSL + L N+ G K+A+ A L +LH +
Sbjct: 71 NGTWTQLWLVSDYHEHGSLFDYL--NRYTVTVEG---MIKLALSTASGLAHLHMEIVGTQ 125
Query: 451 EQPVI-HKDVKSSNILLSDDFEPQLSDFGLASWLSTSSSHLTCTDV--------AGTFGY 501
+P I H+D+KS NIL+ + ++D GLA H + TD GT Y
Sbjct: 126 GKPAIAHRDLKSKNILVKKNGTCCIADLGLA------VRHDSATDTIDIAPNHRVGTKRY 179
Query: 502 LAPEYF------MHGKVSEKIDVYAFGIVLLEL 528
+APE H + ++ D+YA G+V E+
Sbjct: 180 MAPEVLDDSINMKHFESFKRADIYAMGLVFWEI 212
>pdb|3CIK|A Chain A, Human Grk2 In Complex With Gbetagamma Subunits
pdb|3V5W|A Chain A, Human G Protein-Coupled Receptor Kinase 2 In Complex With
Soluble Gbetagamma Subunits And Paroxetine
Length = 689
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 64/251 (25%), Positives = 110/251 (43%), Gaps = 33/251 (13%)
Query: 312 ERYSSTCRLFSYQELLSATSN-FLPEYLVGKGGHSHVYRGCLP--DGKELAVKILKPSED 368
++++ C+ + + + T N F ++G+GG VY GC GK A+K L
Sbjct: 169 DKFTRFCQWKNVELNIHLTMNDFSVHRIIGRGGFGEVY-GCRKADTGKMYAMKCLDKKRI 227
Query: 369 VLKEFASEIEIITALHHRNIISL-------FGFCFE-----DNNLLLVYDFLSRGSLEEN 416
+K+ + AL+ R ++SL F C + L + D ++ G +
Sbjct: 228 KMKQGET-----LALNERIMLSLVSTGDCPFIVCMSYAFHTPDKLSFILDLMNGG----D 278
Query: 417 LHGNKKDGNAFGWTERYKVAVGVAEALDYLHNSCEQPVIHKDVKSSNILLSDDFEPQLSD 476
LH + F + A + L+++HN V+++D+K +NILL + ++SD
Sbjct: 279 LHYHLSQHGVFSEADMRFYAAEIILGLEHMHNRF---VVYRDLKPANILLDEHGHVRISD 335
Query: 477 FGLASWLSTSSSHLTCTDVAGTFGYLAPEYFMHGKVSE-KIDVYAFGIVLLELLSGKKPI 535
GLA S H + GT GY+APE G + D ++ G +L +LL G P
Sbjct: 336 LGLACDFSKKKPHAS----VGTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSPF 391
Query: 536 NSENPKGQESL 546
K + +
Sbjct: 392 RQHKTKDKHEI 402
>pdb|3F66|A Chain A, Human C-Met Kinase In Complex With Quinoxaline Inhibitor
pdb|3F66|B Chain B, Human C-Met Kinase In Complex With Quinoxaline Inhibitor
Length = 298
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 58/211 (27%), Positives = 100/211 (47%), Gaps = 25/211 (11%)
Query: 338 LVGKGGHSHVYRGCL--PDGKEL--AVKILKPSEDV--LKEFASEIEIITALHHRNIISL 391
++G+G VY G L DGK++ AVK L D+ + +F +E I+ H N++SL
Sbjct: 32 VIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSL 91
Query: 392 FGFCFE-DNNLLLVYDFLSRGSLE-----ENLHGNKKDGNAFGWTERYKVAVGVAEALDY 445
G C + + L+V ++ G L E + KD FG + VA+ + Y
Sbjct: 92 LGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFG--------LQVAKGMKY 143
Query: 446 LHNSCEQPVIHKDVKSSNILLSDDFEPQLSDFGLASWLSTSSSHLTCTDVAGTF--GYLA 503
L + +H+D+ + N +L + F +++DFGLA + + ++A
Sbjct: 144 L---ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMA 200
Query: 504 PEYFMHGKVSEKIDVYAFGIVLLELLSGKKP 534
E K + K DV++FG++L EL++ P
Sbjct: 201 LESLQTQKFTTKSDVWSFGVLLWELMTRGAP 231
>pdb|1B6C|B Chain B, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1B6C|D Chain D, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1B6C|F Chain F, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1B6C|H Chain H, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1IAS|A Chain A, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|B Chain B, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|C Chain C, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|D Chain D, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|E Chain E, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|3FAA|A Chain A, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|B Chain B, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|C Chain C, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|D Chain D, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|E Chain E, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3KCF|A Chain A, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|B Chain B, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|C Chain C, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|D Chain D, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|E Chain E, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|2X7O|A Chain A, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|B Chain B, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|C Chain C, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|D Chain D, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|E Chain E, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
Length = 342
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 66/213 (30%), Positives = 96/213 (45%), Gaps = 35/213 (16%)
Query: 339 VGKGGHSHVYRGCLPDGKELAVKILKPSEDVLKEFASEIEIITALHHRNIISLFGFCFED 398
+GKG V+RG G+E+AVKI E+ +EI L H NI+ +D
Sbjct: 50 IGKGRFGEVWRGKW-RGEEVAVKIFSSREERSWFREAEIYQTVMLRHENILGFIAADNKD 108
Query: 399 N----NLLLVYDFLSRGSLEENLHGNKKDGNAFGWTERYKVAVGVAEALDYLH----NSC 450
N L LV D+ GSL + L N+ G K+A+ A L +LH +
Sbjct: 109 NGTWTQLWLVSDYHEHGSLFDYL--NRYTVTVEG---MIKLALSTASGLAHLHMEIVGTQ 163
Query: 451 EQPVI-HKDVKSSNILLSDDFEPQLSDFGLASWLSTSSSHLTCTDV--------AGTFGY 501
+P I H+D+KS NIL+ + ++D GLA H + TD GT Y
Sbjct: 164 GKPAIAHRDLKSKNILVKKNGTCCIADLGLA------VRHDSATDTIDIAPNHRVGTKRY 217
Query: 502 LAPEYF------MHGKVSEKIDVYAFGIVLLEL 528
+APE H + ++ D+YA G+V E+
Sbjct: 218 MAPEVLDDSINMKHFESFKRADIYAMGLVFWEI 250
>pdb|3LQ8|A Chain A, Structure Of The Kinase Domain Of C-Met Bound To Xl880
(Gsk1
Length = 302
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 58/211 (27%), Positives = 100/211 (47%), Gaps = 25/211 (11%)
Query: 338 LVGKGGHSHVYRGCL--PDGKEL--AVKILKPSEDV--LKEFASEIEIITALHHRNIISL 391
++G+G VY G L DGK++ AVK L D+ + +F +E I+ H N++SL
Sbjct: 35 VIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSL 94
Query: 392 FGFCFE-DNNLLLVYDFLSRGSLE-----ENLHGNKKDGNAFGWTERYKVAVGVAEALDY 445
G C + + L+V ++ G L E + KD FG + VA+ + Y
Sbjct: 95 LGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFG--------LQVAKGMKY 146
Query: 446 LHNSCEQPVIHKDVKSSNILLSDDFEPQLSDFGLASWLSTSSSHLTCTDVAGTF--GYLA 503
L + +H+D+ + N +L + F +++DFGLA + + ++A
Sbjct: 147 L---ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMA 203
Query: 504 PEYFMHGKVSEKIDVYAFGIVLLELLSGKKP 534
E K + K DV++FG++L EL++ P
Sbjct: 204 LESLQTQKFTTKSDVWSFGVLLWELMTRGAP 234
>pdb|3TZM|A Chain A, Tgf-Beta Receptor Type 1 In Complex With Sb431542
Length = 309
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 66/213 (30%), Positives = 96/213 (45%), Gaps = 35/213 (16%)
Query: 339 VGKGGHSHVYRGCLPDGKELAVKILKPSEDVLKEFASEIEIITALHHRNIISLFGFCFED 398
+GKG V+RG G+E+AVKI E+ +EI L H NI+ +D
Sbjct: 17 IGKGRFGEVWRGKW-RGEEVAVKIFSSREERSWFREAEIYQTVMLRHENILGFIAADNKD 75
Query: 399 NN----LLLVYDFLSRGSLEENLHGNKKDGNAFGWTERYKVAVGVAEALDYLH----NSC 450
N L LV D+ GSL + L N+ G K+A+ A L +LH +
Sbjct: 76 NGTWTQLWLVSDYHEHGSLFDYL--NRYTVTVEG---MIKLALSTASGLAHLHMEIVGTQ 130
Query: 451 EQPVI-HKDVKSSNILLSDDFEPQLSDFGLASWLSTSSSHLTCTDV--------AGTFGY 501
+P I H+D+KS NIL+ + ++D GLA H + TD GT Y
Sbjct: 131 GKPAIAHRDLKSKNILVKKNGTCCIADLGLA------VRHDSATDTIDIAPNHRVGTKRY 184
Query: 502 LAPEYF------MHGKVSEKIDVYAFGIVLLEL 528
+APE H + ++ D+YA G+V E+
Sbjct: 185 MAPEVLDDSINMKHFESFKRADIYAMGLVFWEI 217
>pdb|1PY5|A Chain A, Crystal Structure Of Tgf-Beta Receptor I Kinase With
Inhibitor
Length = 326
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 66/213 (30%), Positives = 96/213 (45%), Gaps = 35/213 (16%)
Query: 339 VGKGGHSHVYRGCLPDGKELAVKILKPSEDVLKEFASEIEIITALHHRNIISLFGFCFED 398
+GKG V+RG G+E+AVKI E+ +EI L H NI+ +D
Sbjct: 37 IGKGRFGEVWRGKW-RGEEVAVKIFSSREERSWFREAEIYQTVMLRHENILGFIAADNKD 95
Query: 399 N----NLLLVYDFLSRGSLEENLHGNKKDGNAFGWTERYKVAVGVAEALDYLH----NSC 450
N L LV D+ GSL + L N+ G K+A+ A L +LH +
Sbjct: 96 NGTWTQLWLVSDYHEHGSLFDYL--NRYTVTVEG---MIKLALSTASGLAHLHMEIVGTQ 150
Query: 451 EQPVI-HKDVKSSNILLSDDFEPQLSDFGLASWLSTSSSHLTCTDV--------AGTFGY 501
+P I H+D+KS NIL+ + ++D GLA H + TD GT Y
Sbjct: 151 GKPAIAHRDLKSKNILVKKNGTCCIADLGLA------VRHDSATDTIDIAPNHRVGTKRY 204
Query: 502 LAPEYF------MHGKVSEKIDVYAFGIVLLEL 528
+APE H + ++ D+YA G+V E+
Sbjct: 205 MAPEVLDDSINMKHFESFKRADIYAMGLVFWEI 237
>pdb|1VJY|A Chain A, Crystal Structure Of A Naphthyridine Inhibitor Of Human
Tgf- Beta Type I Receptor
pdb|3GXL|A Chain A, Alk-5 Kinase Complex With Gw857175
pdb|3HMM|A Chain A, Structure Of Alk5 + Gw855857
Length = 303
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 66/213 (30%), Positives = 96/213 (45%), Gaps = 35/213 (16%)
Query: 339 VGKGGHSHVYRGCLPDGKELAVKILKPSEDVLKEFASEIEIITALHHRNIISLFGFCFED 398
+GKG V+RG G+E+AVKI E+ +EI L H NI+ +D
Sbjct: 11 IGKGRFGEVWRGKW-RGEEVAVKIFSSREERSWFREAEIYQTVMLRHENILGFIAADNKD 69
Query: 399 N----NLLLVYDFLSRGSLEENLHGNKKDGNAFGWTERYKVAVGVAEALDYLH----NSC 450
N L LV D+ GSL + L N+ G K+A+ A L +LH +
Sbjct: 70 NGTWTQLWLVSDYHEHGSLFDYL--NRYTVTVEG---MIKLALSTASGLAHLHMEIVGTQ 124
Query: 451 EQPVI-HKDVKSSNILLSDDFEPQLSDFGLASWLSTSSSHLTCTDV--------AGTFGY 501
+P I H+D+KS NIL+ + ++D GLA H + TD GT Y
Sbjct: 125 GKPAIAHRDLKSKNILVKKNGTCCIADLGLA------VRHDSATDTIDIAPNHRVGTKRY 178
Query: 502 LAPEYF------MHGKVSEKIDVYAFGIVLLEL 528
+APE H + ++ D+YA G+V E+
Sbjct: 179 MAPEVLDDSINMKHFESFKRADIYAMGLVFWEI 211
>pdb|3KUL|B Chain B, Kinase Domain Of Human Ephrin Type-A Receptor 8 (Epha8)
Length = 325
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 59/207 (28%), Positives = 99/207 (47%), Gaps = 14/207 (6%)
Query: 336 EYLVGKGGHSHVYRGCL--PDGKEL--AVKILKP--SEDVLKEFASEIEIITALHHRNII 389
E ++G G V G L P +++ A+K LK +E ++F SE I+ H NII
Sbjct: 54 EKIIGSGDSGEVCYGRLRVPGQRDVPVAIKALKAGYTERQRRDFLSEASIMGQFDHPNII 113
Query: 390 SLFGFCFEDNNLLLVYDFLSRGSLEENLHGNKKDGNAFGWTERYKVAVGVAEALDYLHNS 449
L G ++V +++ GSL+ L DG F + + GV + YL
Sbjct: 114 RLEGVVTRGRLAMIVTEYMENGSLDTFL--RTHDGQ-FTIMQLVGMLRGVGAGMRYL--- 167
Query: 450 CEQPVIHKDVKSSNILLSDDFEPQLSDFGLASWLS-TSSSHLTCTDVAGTFGYLAPEYFM 508
+ +H+D+ + N+L+ + ++SDFGL+ L + T T + APE
Sbjct: 168 SDLGYVHRDLAARNVLVDSNLVCKVSDFGLSRVLEDDPDAAXTTTGGKIPIRWTAPEAIA 227
Query: 509 HGKVSEKIDVYAFGIVLLELLS-GKKP 534
S DV++FG+V+ E+L+ G++P
Sbjct: 228 FRTFSSASDVWSFGVVMWEVLAYGERP 254
>pdb|3UIU|A Chain A, Crystal Structure Of Apo-Pkr Kinase Domain
pdb|3UIU|B Chain B, Crystal Structure Of Apo-Pkr Kinase Domain
Length = 306
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 69/298 (23%), Positives = 126/298 (42%), Gaps = 64/298 (21%)
Query: 338 LVGKGGHSHVYRGC-LPDGKELAVKILKPSEDVLKEFASEIEIITALHHRNIISLFGFCF 396
L+G GG V++ DGK ++ +K + + + E++ + L H NI+ G C+
Sbjct: 19 LIGSGGFGQVFKAKHRIDGKTYVIRRVKYNNE---KAEREVKALAKLDHVNIVHYNG-CW 74
Query: 397 EDNN------------------------------LLLVYDFLSRGSLEENLHGNKKDGNA 426
+ + L + +F +G+LE+ + K+ G
Sbjct: 75 DGFDYDPETSDDSLESSDYDPENSKNSSRSKTKCLFIQMEFCDKGTLEQWIE--KRRGEK 132
Query: 427 FGWTERYKVAVGVAEALDYLHNSCEQPVIHKDVKSSNILLSDDFEPQLSDFGLASWLSTS 486
++ + + +DY+H+ + +IH+D+K SNI L D + ++ DFGL + L
Sbjct: 133 LDKVLALELFEQITKGVDYIHS---KKLIHRDLKPSNIFLVDTKQVKIGDFGLVTSLKND 189
Query: 487 SSHLTCTDVAGTFGYLAPEYFMHGKVSEKIDVYAFGIVLLELLSGKKPINSENPKGQESL 546
T GT Y++PE +++D+YA G++L ELL E+
Sbjct: 190 GKR---TRSKGTLRYMSPEQISSQDYGKEVDLYALGLILAELL-------HVCDTAFETS 239
Query: 547 VMWAKPILKDGKVSQLLDPSLDTDYDNDQIERMVLAATLSISRAPTVRPQINLVLKLL 604
+ L+DG +S + D E+ +L L S+ P RP + +L+ L
Sbjct: 240 KFFTD--LRDGIISDIFDKK----------EKTLLQKLL--SKKPEDRPNTSEILRTL 283
>pdb|2WOT|A Chain A, Alk5 In Complex With 4-((5,6-Dimethyl-2-(2-Pyridyl)-3-
Pyridyl)oxy)-N-(3,4,5-Trimethoxyphenyl)pyridin-2-Amine
pdb|2WOU|A Chain A, Alk5 In Complex With
4-((4-((2,6-Dimethyl-3-Pyridyl)oxy)-2-
Pyridyl)amino)benzenesulfonamide
Length = 306
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 66/213 (30%), Positives = 96/213 (45%), Gaps = 35/213 (16%)
Query: 339 VGKGGHSHVYRGCLPDGKELAVKILKPSEDVLKEFASEIEIITALHHRNIISLFGFCFED 398
+GKG V+RG G+E+AVKI E+ +EI L H NI+ +D
Sbjct: 14 IGKGRFGEVWRGKW-RGEEVAVKIFSSREERSWFREAEIYQTVMLRHENILGFIAADNKD 72
Query: 399 N----NLLLVYDFLSRGSLEENLHGNKKDGNAFGWTERYKVAVGVAEALDYLH----NSC 450
N L LV D+ GSL + L N+ G K+A+ A L +LH +
Sbjct: 73 NGTWTQLWLVSDYHEHGSLFDYL--NRYTVTVEG---MIKLALSTASGLAHLHMEIVGTQ 127
Query: 451 EQPVI-HKDVKSSNILLSDDFEPQLSDFGLASWLSTSSSHLTCTDV--------AGTFGY 501
+P I H+D+KS NIL+ + ++D GLA H + TD GT Y
Sbjct: 128 GKPAIAHRDLKSKNILVKKNGTCCIADLGLA------VRHDSATDTIDIAPNHRVGTKRY 181
Query: 502 LAPEYF------MHGKVSEKIDVYAFGIVLLEL 528
+APE H + ++ D+YA G+V E+
Sbjct: 182 MAPEVLDDSINMKHFESFKRADIYAMGLVFWEI 214
>pdb|3SOA|A Chain A, Full-Length Human Camkii
Length = 444
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 57/209 (27%), Positives = 98/209 (46%), Gaps = 18/209 (8%)
Query: 339 VGKGGHSHVYRGCLP--DGKELAVKIL---KPSEDVLKEFASEIEIITALHHRNIISLFG 393
+GKG S V R C+ G+E A I+ K S ++ E I L H NI+ L
Sbjct: 19 LGKGAFS-VVRRCVKVLAGQEYAAMIINTKKLSARDHQKLEREARICRLLKHPNIVRLHD 77
Query: 394 FCFEDNNLLLVYDFLSRGSLEENLHGNKKDGNAFGWTERYKVAVGVAEALDYLHNSCEQP 453
E+ + L++D ++ G L E++ + A + + + L+ + + +
Sbjct: 78 SISEEGHHYLIFDLVTGGELFEDIVAREYYSEA-------DASHCIQQILEAVLHCHQMG 130
Query: 454 VIHKDVKSSNILLSDDFEP---QLSDFGLASWLSTSSSHLTCTDVAGTFGYLAPEYFMHG 510
V+H+++K N+LL+ + +L+DFGLA + AGT GYL+PE
Sbjct: 131 VVHRNLKPENLLLASKLKGAAVKLADFGLA--IEVEGEQQAWFGFAGTPGYLSPEVLRKD 188
Query: 511 KVSEKIDVYAFGIVLLELLSGKKPINSEN 539
+ +D++A G++L LL G P E+
Sbjct: 189 PYGKPVDLWACGVILYILLVGYPPFWDED 217
>pdb|3KUL|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 8 (Epha8)
Length = 325
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 59/207 (28%), Positives = 99/207 (47%), Gaps = 14/207 (6%)
Query: 336 EYLVGKGGHSHVYRGCL--PDGKEL--AVKILKP--SEDVLKEFASEIEIITALHHRNII 389
E ++G G V G L P +++ A+K LK +E ++F SE I+ H NII
Sbjct: 54 EKIIGSGDSGEVCYGRLRVPGQRDVPVAIKALKAGYTERQRRDFLSEASIMGQFDHPNII 113
Query: 390 SLFGFCFEDNNLLLVYDFLSRGSLEENLHGNKKDGNAFGWTERYKVAVGVAEALDYLHNS 449
L G ++V +++ GSL+ L DG F + + GV + YL
Sbjct: 114 RLEGVVTRGRLAMIVTEYMENGSLDTFL--RTHDGQ-FTIMQLVGMLRGVGAGMRYL--- 167
Query: 450 CEQPVIHKDVKSSNILLSDDFEPQLSDFGLASWLS-TSSSHLTCTDVAGTFGYLAPEYFM 508
+ +H+D+ + N+L+ + ++SDFGL+ L + T T + APE
Sbjct: 168 SDLGYVHRDLAARNVLVDSNLVCKVSDFGLSRVLEDDPDAAYTTTGGKIPIRWTAPEAIA 227
Query: 509 HGKVSEKIDVYAFGIVLLELLS-GKKP 534
S DV++FG+V+ E+L+ G++P
Sbjct: 228 FRTFSSASDVWSFGVVMWEVLAYGERP 254
>pdb|2HW6|A Chain A, Crystal Structure Of Mnk1 Catalytic Domain
pdb|2HW6|B Chain B, Crystal Structure Of Mnk1 Catalytic Domain
Length = 307
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 63/217 (29%), Positives = 103/217 (47%), Gaps = 29/217 (13%)
Query: 338 LVGKGGHSHVYRGC-LPDGKELAVKIL-KPSEDVLKEFASEIEIITALH-HRNIISLFGF 394
L+G+G ++ V L +GKE AVKI+ K + E+E + ++NI+ L F
Sbjct: 20 LLGEGAYAKVQGAVSLQNGKEYAVKIIEKQAGHSRSRVFREVETLYQCQGNKNILELIEF 79
Query: 395 CFEDNNLLLVYDFLSRGSLEENLHGNKKDGNAFGWTERYKVAVGVAEALDYLHNSCEQPV 454
+D LV++ L GS+ ++ K F E +V VA ALD+LH + +
Sbjct: 80 FEDDTRFYLVFEKLQGGSILAHIQKQKH----FNEREASRVVRDVAAALDFLHT---KGI 132
Query: 455 IHKDVKSSNILLS--DDFEP-QLSDFGLASWLSTSSSHLTCTDV--------AGTFGYLA 503
H+D+K NIL + P ++ DF L S + ++S CT + G+ Y+A
Sbjct: 133 AHRDLKPENILCESPEKVSPVKICDFDLGSGMKLNNS---CTPITTPELTTPCGSAEYMA 189
Query: 504 PEYF-----MHGKVSEKIDVYAFGIVLLELLSGKKPI 535
PE ++ D+++ G+VL +LSG P
Sbjct: 190 PEVVEVFTDQATFYDKRCDLWSLGVVLYIMLSGYPPF 226
>pdb|1U5Q|A Chain A, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5Q|B Chain B, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5R|A Chain A, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5R|B Chain B, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
Length = 348
Score = 68.2 bits (165), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 54/179 (30%), Positives = 87/179 (48%), Gaps = 16/179 (8%)
Query: 364 KPSEDVLKEFASEIEIITALHHRNIISLFGFCFEDNNLLLVYDFLSRGSLEENLHGNKKD 423
K S + ++ E+ + L H N I G ++ LV ++ GS + L +KK
Sbjct: 92 KQSNEKWQDIIKEVRFLQKLRHPNTIQYRGCYLREHTAWLVMEY-CLGSASDLLEVHKK- 149
Query: 424 GNAFGWTERYKVAVGVAEALDYLHNSCEQPVIHKDVKSSNILLSDDFEPQLSDFGLASWL 483
E V G + L YLH+ +IH+DVK+ NILLS+ +L DFG AS +
Sbjct: 150 --PLQEVEIAAVTHGALQGLAYLHS---HNMIHRDVKAGNILLSEPGLVKLGDFGSASIM 204
Query: 484 STSSSHLTCTDVAGTFGYLAPEYFM---HGKVSEKIDVYAFGIVLLELLSGKKPINSEN 539
+ ++ + GT ++APE + G+ K+DV++ GI +EL K P+ + N
Sbjct: 205 APANXFV------GTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMN 257
>pdb|3UTO|A Chain A, Twitchin Kinase Region From C.Elegans
(Fn31-Nl-Kin-Crd-Ig26)
pdb|3UTO|B Chain B, Twitchin Kinase Region From C.Elegans
(Fn31-Nl-Kin-Crd-Ig26)
Length = 573
Score = 68.2 bits (165), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 53/188 (28%), Positives = 87/188 (46%), Gaps = 12/188 (6%)
Query: 355 GKELAVK-ILKPSEDVLKEFASEIEIITALHHRNIISLFGFCFEDNNLLLVYDFLSRGSL 413
G A K ++ P E + EI+ ++ L H +++L +DN ++++Y+F+S G L
Sbjct: 182 GNNFAAKFVMTPHESDKETVRKEIQTMSVLRHPTLVNLHDAFEDDNEMVMIYEFMSGGEL 241
Query: 414 EENLHGNKKDGNAFGWTERYKVAVGVAEALDYLHNSCEQPVIHKDVKSSNILLSDDF--E 471
E + + N E + V + L ++H E +H D+K NI+ + E
Sbjct: 242 FEKV---ADEHNKMSEDEAVEYMRQVCKGLCHMH---ENNYVHLDLKPENIMFTTKRSNE 295
Query: 472 PQLSDFGLASWLSTSSSHLTCTDVAGTFGYLAPEYFMHGKVSEKIDVYAFGIVLLELLSG 531
+L DFGL + L S T GT + APE V D+++ G++ LLSG
Sbjct: 296 LKLIDFGLTAHLDPKQSVKVTT---GTAEFAAPEVAEGKPVGYYTDMWSVGVLSYILLSG 352
Query: 532 KKPINSEN 539
P EN
Sbjct: 353 LSPFGGEN 360
>pdb|1KOA|A Chain A, Twitchin Kinase Fragment (C.Elegans), Autoregulated
Protein Kinase And Immunoglobulin Domains
Length = 491
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 53/188 (28%), Positives = 87/188 (46%), Gaps = 12/188 (6%)
Query: 355 GKELAVK-ILKPSEDVLKEFASEIEIITALHHRNIISLFGFCFEDNNLLLVYDFLSRGSL 413
G A K ++ P E + EI+ ++ L H +++L +DN ++++Y+F+S G L
Sbjct: 76 GNNFAAKFVMTPHESDKETVRKEIQTMSVLRHPTLVNLHDAFEDDNEMVMIYEFMSGGEL 135
Query: 414 EENLHGNKKDGNAFGWTERYKVAVGVAEALDYLHNSCEQPVIHKDVKSSNILLSDDF--E 471
E + + N E + V + L ++H E +H D+K NI+ + E
Sbjct: 136 FEKV---ADEHNKMSEDEAVEYMRQVCKGLCHMH---ENNYVHLDLKPENIMFTTKRSNE 189
Query: 472 PQLSDFGLASWLSTSSSHLTCTDVAGTFGYLAPEYFMHGKVSEKIDVYAFGIVLLELLSG 531
+L DFGL + L S T GT + APE V D+++ G++ LLSG
Sbjct: 190 LKLIDFGLTAHLDPKQSVKVTT---GTAEFAAPEVAEGKPVGYYTDMWSVGVLSYILLSG 246
Query: 532 KKPINSEN 539
P EN
Sbjct: 247 LSPFGGEN 254
>pdb|2GCD|A Chain A, Tao2 Kinase Domain-Staurosporine Structure
pdb|2GCD|B Chain B, Tao2 Kinase Domain-Staurosporine Structure
Length = 309
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 60/209 (28%), Positives = 99/209 (47%), Gaps = 21/209 (10%)
Query: 339 VGKGGHSHVYRGC-LPDGKELAVKIL----KPSEDVLKEFASEIEIITALHHRNIISLFG 393
+G G VY + + + +A+K + K S + ++ E+ + L H N I G
Sbjct: 23 IGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPNTIQYRG 82
Query: 394 FCFEDNNLLLVYDFLSRGSLEENLHGNKKDGNAFGWTERYKVAVGVAEALDYLHNSCEQP 453
++ LV ++ GS + L +KK E V G + L YLH+
Sbjct: 83 CYLREHTAWLVMEY-CLGSASDLLEVHKKPLQE---VEIAAVTHGALQGLAYLHS---HN 135
Query: 454 VIHKDVKSSNILLSDDFEPQLSDFGLASWLSTSSSHLTCTDVAGTFGYLAPEYFM---HG 510
+IH+DVK+ NILLS+ +L DFG AS ++ ++ GT ++APE + G
Sbjct: 136 MIHRDVKAGNILLSEPGLVKLGDFGSASIMAPANX------FVGTPYWMAPEVILAMDEG 189
Query: 511 KVSEKIDVYAFGIVLLELLSGKKPINSEN 539
+ K+DV++ GI +EL K P+ + N
Sbjct: 190 QYDGKVDVWSLGITCIELAERKPPLFNMN 218
>pdb|2Y94|A Chain A, Structure Of An Active Form Of Mammalian Ampk
Length = 476
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 50/192 (26%), Positives = 97/192 (50%), Gaps = 19/192 (9%)
Query: 355 GKELAVKILKP----SEDVLKEFASEIEIITALHHRNIISLFGFCFEDNNLLLVYDFLSR 410
G ++AVKIL S DV+ + EI+ + H +II L+ +++ +V +++S
Sbjct: 41 GHKVAVKILNRQKIRSLDVVGKIRREIQNLKLFRHPHIIKLYQVISTPSDIFMVMEYVSG 100
Query: 411 GSLEENLHGNKKDGNAFGWTERYKVAVGVAEALDYLHNSCEQPVIHKDVKSSNILLSDDF 470
G L + + N + E ++ + +DY H V+H+D+K N+LL
Sbjct: 101 GELFDYICKNGR----LDEKESRRLFQQILSGVDYCHRHM---VVHRDLKPENVLLDAHM 153
Query: 471 EPQLSDFGLASWLSTSSS-HLTCTDVAGTFGYLAPEYFMHGKV--SEKIDVYAFGIVLLE 527
+++DFGL++ +S +C G+ Y APE + G++ ++D+++ G++L
Sbjct: 154 NAKIADFGLSNMMSDGEFLRXSC----GSPNYAAPE-VISGRLYAGPEVDIWSSGVILYA 208
Query: 528 LLSGKKPINSEN 539
LL G P + ++
Sbjct: 209 LLCGTLPFDDDH 220
>pdb|2I1M|A Chain A, Cfms Tyrosine Kinase (Tie2 Kid) In Complex With An
Arylamide Inhibitor
Length = 333
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 49/187 (26%), Positives = 92/187 (49%), Gaps = 16/187 (8%)
Query: 357 ELAVKILKPSE--DVLKEFASEIEIITAL-HHRNIISLFGFCFEDNNLLLVYDFLSRGSL 413
++AVK+LK + D + SE++I++ L H NI++L G C +L++ ++ G L
Sbjct: 78 KVAVKMLKSTAHADEKEALMSELKIMSHLGQHENIVNLLGACTHGGPVLVITEYCCYGDL 137
Query: 414 EENLHGNKKDGNAFGWTERYKVAVGVAEALDYLHNSCE----------QPVIHKDVKSSN 463
L ++ + +A A D LH S + + IH+DV + N
Sbjct: 138 LNFL---RRKSRVLETDPAFAIANSTASTRDLLHFSSQVAQGMAFLASKNCIHRDVAARN 194
Query: 464 ILLSDDFEPQLSDFGLASWLSTSSSHLTCTDVAGTFGYLAPEYFMHGKVSEKIDVYAFGI 523
+LL++ ++ DFGLA + S+++ + ++APE + + DV+++GI
Sbjct: 195 VLLTNGHVAKIGDFGLARDIMNDSNYIVKGNARLPVKWMAPESIFDCVYTVQSDVWSYGI 254
Query: 524 VLLELLS 530
+L E+ S
Sbjct: 255 LLWEIFS 261
>pdb|3TXO|A Chain A, Pkc Eta Kinase In Complex With A Naphthyridine
Length = 353
Score = 67.0 bits (162), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 60/218 (27%), Positives = 107/218 (49%), Gaps = 17/218 (7%)
Query: 329 ATSNFLPEYLVGKGGHSHVYRGCLPDGKEL-AVKILKP----SEDVLKEFASEIEIIT-A 382
NF ++GKG V + + +L AVK+LK +D ++ +E I++ A
Sbjct: 21 GIDNFEFIRVLGKGSFGKVMLARVKETGDLYAVKVLKKDVILQDDDVECTMTEKRILSLA 80
Query: 383 LHHRNIISLFGFCFED-NNLLLVYDFLSRGSLEENLHGNKKDGNAFGWTERYKVAVGVAE 441
+H + LF CF+ + L V +F++ G L ++ +++ A R+ A +
Sbjct: 81 RNHPFLTQLFC-CFQTPDRLFFVMEFVNGGDLMFHIQKSRRFDEA---RARF-YAAEIIS 135
Query: 442 ALDYLHNSCEQPVIHKDVKSSNILLSDDFEPQLSDFGLASWLSTSSSHLTCTDVAGTFGY 501
AL +LH+ + +I++D+K N+LL + +L+DFG+ + +T GT Y
Sbjct: 136 ALMFLHD---KGIIYRDLKLDNVLLDHEGHCKLADFGMCK--EGICNGVTTATFCGTPDY 190
Query: 502 LAPEYFMHGKVSEKIDVYAFGIVLLELLSGKKPINSEN 539
+APE +D +A G++L E+L G P +EN
Sbjct: 191 IAPEILQEMLYGPAVDWWAMGVLLYEMLCGHAPFEAEN 228
>pdb|3NYX|A Chain A, Non-Phosphorylated Tyk2 Jh1 Domain With
Quinoline-Thiadiazole- Thiophene Inhibitor
Length = 302
Score = 67.0 bits (162), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 53/181 (29%), Positives = 88/181 (48%), Gaps = 13/181 (7%)
Query: 355 GKELAVKILKP--SEDVLKEFASEIEIITALHHRNIISLFGFCFE--DNNLLLVYDFLSR 410
G+ +AVK LK + EI+I+ L+H +II G C + + +L LV +++
Sbjct: 43 GEMVAVKALKADCGPQHRSGWKQEIDILRTLYHEHIIKYKGCCEDQGEKSLQLVMEYVPL 102
Query: 411 GSLEENLHGNKKDGNAFGWTERYKVAVGVAEALDYLHNSCEQPVIHKDVKSSNILLSDDF 470
GSL + L ++ G + A + E + YLH+ Q IH+++ + N+LL +D
Sbjct: 103 GSLRDYL-----PRHSIGLAQLLLFAQQICEGMAYLHS---QHYIHRNLAARNVLLDNDR 154
Query: 471 EPQLSDFGLASWLSTSSSHLTCT-DVAGTFGYLAPEYFMHGKVSEKIDVYAFGIVLLELL 529
++ DFGLA + + D + APE K DV++FG+ L ELL
Sbjct: 155 LVKIGDFGLAKAVPEGHEYYRVREDGDSPVFWYAPECLKEYKFYYASDVWSFGVTLYELL 214
Query: 530 S 530
+
Sbjct: 215 T 215
>pdb|3MY0|A Chain A, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|B Chain B, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|C Chain C, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|D Chain D, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|E Chain E, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|F Chain F, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|G Chain G, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|H Chain H, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|I Chain I, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|J Chain J, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|K Chain K, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|L Chain L, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|M Chain M, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|N Chain N, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|O Chain O, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|P Chain P, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|Q Chain Q, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|R Chain R, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|S Chain S, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|T Chain T, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|U Chain U, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|V Chain V, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|W Chain W, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|X Chain X, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
Length = 305
Score = 66.6 bits (161), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 66/221 (29%), Positives = 98/221 (44%), Gaps = 51/221 (23%)
Query: 339 VGKGGHSHVYRGCLPDGKELAVKILKPSEDVLKEFASEIEIITALHHRNIISLFGFCFED 398
VGKG + V+RG L G+ +AVKI ++ +EI L H NI+
Sbjct: 16 VGKGRYGEVWRG-LWHGESVAVKIFSSRDEQSWFRETEIYNTVLLRHDNILGFIASDMTS 74
Query: 399 NN----LLLV---------YDFLSRGSLEENLHGNKKDGNAFGWTERYKVAVGVAEALDY 445
N L L+ YDFL R +LE +L ++AV A L +
Sbjct: 75 RNSSTQLWLITHYHEHGSLYDFLQRQTLEPHL--------------ALRLAVSAACGLAH 120
Query: 446 LH----NSCEQPVI-HKDVKSSNILLSDDFEPQLSDFGLASWLSTSSSHLTCTD--VAGT 498
LH + +P I H+D KS N+L+ + + ++D GLA S S +L + GT
Sbjct: 121 LHVEIFGTQGKPAIAHRDFKSRNVLVKSNLQCCIADLGLAVMHSQGSDYLDIGNNPRVGT 180
Query: 499 FGYLAPEYFMHGKVSEKI-----------DVYAFGIVLLEL 528
Y+APE + E+I D++AFG+VL E+
Sbjct: 181 KRYMAPEV-----LDEQIRTDCFESYKWTDIWAFGLVLWEI 216
>pdb|1U59|A Chain A, Crystal Structure Of The Zap-70 Kinase Domain In Complex
With Staurosporine
Length = 287
Score = 66.6 bits (161), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 54/184 (29%), Positives = 96/184 (52%), Gaps = 15/184 (8%)
Query: 357 ELAVKILKPSEDV--LKEFASEIEIITALHHRNIISLFGFCFEDNNLLLVYDFLSRGSLE 414
++A+K+LK + +E E +I+ L + I+ L G C + L+LV + G L
Sbjct: 39 DVAIKVLKQGTEKADTEEMMREAQIMHQLDNPYIVRLIGVC-QAEALMLVMEMAGGGPLH 97
Query: 415 ENLHGNKKDGNAFGWTER-YKVAVGVAEALDYLHNSCEQPVIHKDVKSSNILLSDDFEPQ 473
+ L G +++ E ++V++G + YL E+ +H+D+ + N+LL + +
Sbjct: 98 KFLVGKREEIPVSNVAELLHQVSMG----MKYLE---EKNFVHRDLAARNVLLVNRHYAK 150
Query: 474 LSDFGLASWLSTSSSHLTCTDVAGTF--GYLAPEYFMHGKVSEKIDVYAFGIVLLELLS- 530
+SDFGL+ L S+ T AG + + APE K S + DV+++G+ + E LS
Sbjct: 151 ISDFGLSKALGADDSYYTARS-AGKWPLKWYAPECINFRKFSSRSDVWSYGVTMWEALSY 209
Query: 531 GKKP 534
G+KP
Sbjct: 210 GQKP 213
>pdb|3G51|A Chain A, Structural Diversity Of The Active Conformation Of The N-
Terminal Kinase Domain Of P90 Ribosomal S6 Kinase 2
Length = 325
Score = 66.6 bits (161), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 57/206 (27%), Positives = 107/206 (51%), Gaps = 21/206 (10%)
Query: 354 DGKEL-AVKILKPSEDVLKEFAS---EIEIITALHHRNIISLFGFCFE-DNNLLLVYDFL 408
D ++L A+K+LK + +++ E +I+ ++H I+ L + F+ + L L+ DFL
Sbjct: 50 DARQLYAMKVLKKATLKVRDRVRTKMERDILVEVNHPFIVKL-HYAFQTEGKLYLILDFL 108
Query: 409 SRGSLEENLHGNKKDGNAFGWTE---RYKVAVGVAEALDYLHNSCEQPVIHKDVKSSNIL 465
G L L +TE ++ +A +A ALD+LH+ +I++D+K NIL
Sbjct: 109 RGGDLFTRL------SKEVMFTEEDVKFYLA-ELALALDHLHSLG---IIYRDLKPENIL 158
Query: 466 LSDDFEPQLSDFGLASWLSTSSSHLTCTDVAGTFGYLAPEYFMHGKVSEKIDVYAFGIVL 525
L ++ +L+DFGL+ + GT Y+APE ++ D ++FG+++
Sbjct: 159 LDEEGHIKLTDFGLSK--ESIDHEKKAYSFCGTVEYMAPEVVNRRGHTQSADWWSFGVLM 216
Query: 526 LELLSGKKPINSENPKGQESLVMWAK 551
E+L+G P ++ K ++++ AK
Sbjct: 217 FEMLTGTLPFQGKDRKETMTMILKAK 242
>pdb|1R0P|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
The Microbial Alkaloid K-252a
pdb|1R1W|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met
Length = 312
Score = 66.6 bits (161), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 60/212 (28%), Positives = 102/212 (48%), Gaps = 27/212 (12%)
Query: 338 LVGKGGHSHVYRGCL--PDGKEL--AVKILKPSEDV--LKEFASEIEIITALHHRNIISL 391
++G+G VY G L DGK++ AVK L D+ + +F +E I+ H N++SL
Sbjct: 35 VIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSL 94
Query: 392 FGFCFE-DNNLLLVYDFLSRGSLE-----ENLHGNKKDGNAFGWTERYKVAVGVAEALDY 445
G C + + L+V ++ G L E + KD FG + VA+ + +
Sbjct: 95 LGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFG--------LQVAKGMKF 146
Query: 446 LHNSCEQPVIHKDVKSSNILLSDDFEPQLSDFGLASWL---STSSSHLTCTDVAGTFGYL 502
L + +H+D+ + N +L + F +++DFGLA + S H T ++
Sbjct: 147 L---ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVH-NKTGAKLPVKWM 202
Query: 503 APEYFMHGKVSEKIDVYAFGIVLLELLSGKKP 534
A E K + K DV++FG++L EL++ P
Sbjct: 203 ALESLQTQKFTTKSDVWSFGVLLWELMTRGAP 234
>pdb|3C1X|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Pyrrolotriazine Based Inhibitor
Length = 373
Score = 66.6 bits (161), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 60/212 (28%), Positives = 102/212 (48%), Gaps = 27/212 (12%)
Query: 338 LVGKGGHSHVYRGCL--PDGKEL--AVKILKPSEDV--LKEFASEIEIITALHHRNIISL 391
++G+G VY G L DGK++ AVK L D+ + +F +E I+ H N++SL
Sbjct: 96 VIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSL 155
Query: 392 FGFCFE-DNNLLLVYDFLSRGSLE-----ENLHGNKKDGNAFGWTERYKVAVGVAEALDY 445
G C + + L+V ++ G L E + KD FG + VA+ + +
Sbjct: 156 LGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFG--------LQVAKGMKF 207
Query: 446 LHNSCEQPVIHKDVKSSNILLSDDFEPQLSDFGLASWL---STSSSHLTCTDVAGTFGYL 502
L + +H+D+ + N +L + F +++DFGLA + S H T ++
Sbjct: 208 L---ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVH-NKTGAKLPVKWM 263
Query: 503 APEYFMHGKVSEKIDVYAFGIVLLELLSGKKP 534
A E K + K DV++FG++L EL++ P
Sbjct: 264 ALESLQTQKFTTKSDVWSFGVLLWELMTRGAP 295
>pdb|4FNW|A Chain A, Crystal Structure Of The Apo F1174l Anaplastic Lymphoma
Kinase Catalytic Domain
Length = 327
Score = 66.6 bits (161), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 56/216 (25%), Positives = 97/216 (44%), Gaps = 18/216 (8%)
Query: 339 VGKGGHSHVYRGCL------PDGKELAVKILKP--SEDVLKEFASEIEIITALHHRNIIS 390
+G G VY G + P ++AVK L SE +F E II+ L+H+NI+
Sbjct: 39 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKLNHQNIVR 98
Query: 391 LFGFCFEDNNLLLVYDFLSRGSLEENLHGNKK---DGNAFGWTERYKVAVGVAEALDYLH 447
G + ++ + ++ G L+ L + ++ + VA +A YL
Sbjct: 99 CIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLE 158
Query: 448 NSCEQPVIHKDVKSSNILLS---DDFEPQLSDFGLASWLSTSSSHLTCTDVAGTFGYLAP 504
E IH+D+ + N LL+ ++ DFG+A + +S + ++ P
Sbjct: 159 ---ENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVKWMPP 215
Query: 505 EYFMHGKVSEKIDVYAFGIVLLELLS-GKKPINSEN 539
E FM G + K D ++FG++L E+ S G P S++
Sbjct: 216 EAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKS 251
>pdb|3UBD|A Chain A, Structure Of N-Terminal Domain Of Rsk2 Kinase In Complex
With Flavonoid Glycoside Sl0101
Length = 304
Score = 66.6 bits (161), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 57/206 (27%), Positives = 107/206 (51%), Gaps = 21/206 (10%)
Query: 354 DGKEL-AVKILKPSEDVLKEFAS---EIEIITALHHRNIISLFGFCFE-DNNLLLVYDFL 408
D ++L A+K+LK + +++ E +I+ ++H I+ L + F+ + L L+ DFL
Sbjct: 50 DARQLYAMKVLKKATLKVRDRVRTKMERDILVEVNHPFIVKLH-YAFQTEGKLYLILDFL 108
Query: 409 SRGSLEENLHGNKKDGNAFGWTE---RYKVAVGVAEALDYLHNSCEQPVIHKDVKSSNIL 465
G L L +TE ++ +A +A ALD+LH+ +I++D+K NIL
Sbjct: 109 RGGDLFTRL------SKEVMFTEEDVKFYLA-ELALALDHLHSLG---IIYRDLKPENIL 158
Query: 466 LSDDFEPQLSDFGLASWLSTSSSHLTCTDVAGTFGYLAPEYFMHGKVSEKIDVYAFGIVL 525
L ++ +L+DFGL+ + GT Y+APE ++ D ++FG+++
Sbjct: 159 LDEEGHIKLTDFGLSK--ESIDHEKKAYSFCGTVEYMAPEVVNRRGHTQSADWWSFGVLM 216
Query: 526 LELLSGKKPINSENPKGQESLVMWAK 551
E+L+G P ++ K ++++ AK
Sbjct: 217 FEMLTGTLPFQGKDRKETMTMILKAK 242
>pdb|3DKC|A Chain A, Sgx Clone 5698a65kfg1h1
pdb|3DKF|A Chain A, Sgx Clone 5698a65kfg1h1
Length = 317
Score = 66.6 bits (161), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 60/212 (28%), Positives = 102/212 (48%), Gaps = 27/212 (12%)
Query: 338 LVGKGGHSHVYRGCL--PDGKEL--AVKILKPSEDV--LKEFASEIEIITALHHRNIISL 391
++G+G VY G L DGK++ AVK L D+ + +F +E I+ H N++SL
Sbjct: 38 VIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSL 97
Query: 392 FGFCFE-DNNLLLVYDFLSRGSLE-----ENLHGNKKDGNAFGWTERYKVAVGVAEALDY 445
G C + + L+V ++ G L E + KD FG + VA+ + +
Sbjct: 98 LGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFG--------LQVAKGMKF 149
Query: 446 LHNSCEQPVIHKDVKSSNILLSDDFEPQLSDFGLASWL---STSSSHLTCTDVAGTFGYL 502
L + +H+D+ + N +L + F +++DFGLA + S H T ++
Sbjct: 150 L---ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVH-NKTGAKLPVKWM 205
Query: 503 APEYFMHGKVSEKIDVYAFGIVLLELLSGKKP 534
A E K + K DV++FG++L EL++ P
Sbjct: 206 ALESLQTQKFTTKSDVWSFGVLLWELMTRGAP 237
>pdb|3CTH|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Aminopyridine Based Inhibitor
pdb|3CTJ|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Aminopyridine Based Inhibitor
pdb|3CE3|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Pyrrolopyridinepyridone Based Inhibitor
pdb|3F82|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
N-
(4-(2-Amino-3-Chloropyridin-4-Yloxy)-3-Fluorophenyl)-4-
Ethoxy-1-(4-Fluorophenyl)-2-Oxo-1,2-Dihydropyridine-3-
Carboxamide
pdb|3L8V|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepat Growth Factor Receptor C-Met In Complex With A
Biarylamine Inhibitor
Length = 314
Score = 66.6 bits (161), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 60/212 (28%), Positives = 102/212 (48%), Gaps = 27/212 (12%)
Query: 338 LVGKGGHSHVYRGCL--PDGKEL--AVKILKPSEDV--LKEFASEIEIITALHHRNIISL 391
++G+G VY G L DGK++ AVK L D+ + +F +E I+ H N++SL
Sbjct: 37 VIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSL 96
Query: 392 FGFCFE-DNNLLLVYDFLSRGSLE-----ENLHGNKKDGNAFGWTERYKVAVGVAEALDY 445
G C + + L+V ++ G L E + KD FG + VA+ + +
Sbjct: 97 LGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFG--------LQVAKGMKF 148
Query: 446 LHNSCEQPVIHKDVKSSNILLSDDFEPQLSDFGLASWL---STSSSHLTCTDVAGTFGYL 502
L + +H+D+ + N +L + F +++DFGLA + S H T ++
Sbjct: 149 L---ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVH-NKTGAKLPVKWM 204
Query: 503 APEYFMHGKVSEKIDVYAFGIVLLELLSGKKP 534
A E K + K DV++FG++L EL++ P
Sbjct: 205 ALESLQTQKFTTKSDVWSFGVLLWELMTRGAP 236
>pdb|3MTF|A Chain A, Crystal Structure Of The Acvr1 Kinase In Complex With A 2-
Aminopyridine Inhibitor
pdb|3MTF|B Chain B, Crystal Structure Of The Acvr1 Kinase In Complex With A 2-
Aminopyridine Inhibitor
pdb|3OOM|A Chain A, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With The Imidazo[1,2-B]pyridazine Inhibitor K00507
pdb|3Q4U|A Chain A, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
pdb|3Q4U|B Chain B, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
pdb|3Q4U|C Chain C, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
pdb|3Q4U|D Chain D, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
Length = 301
Score = 66.6 bits (161), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 62/212 (29%), Positives = 100/212 (47%), Gaps = 33/212 (15%)
Query: 339 VGKGGHSHVYRGCLPDGKELAVKILKPSEDVLKEFASEIEI--ITALHHRNIISLFGFCF 396
VGKG + V+RG G+ +AVKI ++ K + E E+ L H NI+ GF
Sbjct: 16 VGKGRYGEVWRGSW-QGENVAVKIFSSRDE--KSWFRETELYNTVMLRHENIL---GFIA 69
Query: 397 ED-------NNLLLVYDFLSRGSLEENLHGNKKDGNAFGWTERYKVAVGVAEALDYLH-- 447
D L L+ + GSL + L D + ++ + +A L +LH
Sbjct: 70 SDMTSRHSSTQLWLITHYHEMGSLYDYLQLTTLDTVSC-----LRIVLSIASGLAHLHIE 124
Query: 448 --NSCEQPVI-HKDVKSSNILLSDDFEPQLSDFGLASWLSTSSSHLTCTD--VAGTFGYL 502
+ +P I H+D+KS NIL+ + + ++D GLA S S++ L + GT Y+
Sbjct: 125 IFGTQGKPAIAHRDLKSKNILVKKNGQCCIADLGLAVMHSQSTNQLDVGNNPRVGTKRYM 184
Query: 503 APEYFMHG------KVSEKIDVYAFGIVLLEL 528
APE +++D++AFG+VL E+
Sbjct: 185 APEVLDETIQVDCFDSYKRVDIWAFGLVLWEV 216
>pdb|3DKG|A Chain A, Sgx Clone 5698a109kfg1h1
Length = 317
Score = 66.2 bits (160), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 60/212 (28%), Positives = 102/212 (48%), Gaps = 27/212 (12%)
Query: 338 LVGKGGHSHVYRGCL--PDGKEL--AVKILKPSEDV--LKEFASEIEIITALHHRNIISL 391
++G+G VY G L DGK++ AVK L D+ + +F +E I+ H N++SL
Sbjct: 38 VIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSL 97
Query: 392 FGFCFE-DNNLLLVYDFLSRGSLE-----ENLHGNKKDGNAFGWTERYKVAVGVAEALDY 445
G C + + L+V ++ G L E + KD FG + VA+ + +
Sbjct: 98 LGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFG--------LQVAKGMKF 149
Query: 446 LHNSCEQPVIHKDVKSSNILLSDDFEPQLSDFGLASWL---STSSSHLTCTDVAGTFGYL 502
L + +H+D+ + N +L + F +++DFGLA + S H T ++
Sbjct: 150 L---ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMLDKEFDSVH-NKTGAKLPVKWM 205
Query: 503 APEYFMHGKVSEKIDVYAFGIVLLELLSGKKP 534
A E K + K DV++FG++L EL++ P
Sbjct: 206 ALESLQTQKFTTKSDVWSFGVLLWELMTRGAP 237
>pdb|4EL9|A Chain A, Structure Of N-Terminal Kinase Domain Of Rsk2 With Afzelin
pdb|4GUE|A Chain A, Structure Of N-terminal Kinase Domain Of Rsk2 With
Flavonoid Glycoside Quercitrin
Length = 305
Score = 66.2 bits (160), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 57/206 (27%), Positives = 107/206 (51%), Gaps = 21/206 (10%)
Query: 354 DGKEL-AVKILKPSEDVLKEFAS---EIEIITALHHRNIISLFGFCFE-DNNLLLVYDFL 408
D ++L A+K+LK + +++ E +I+ ++H I+ L + F+ + L L+ DFL
Sbjct: 51 DARQLYAMKVLKKATLKVRDRVRTKMERDILVEVNHPFIVKLH-YAFQTEGKLYLILDFL 109
Query: 409 SRGSLEENLHGNKKDGNAFGWTE---RYKVAVGVAEALDYLHNSCEQPVIHKDVKSSNIL 465
G L L +TE ++ +A +A ALD+LH+ +I++D+K NIL
Sbjct: 110 RGGDLFTRL------SKEVMFTEEDVKFYLA-ELALALDHLHSLG---IIYRDLKPENIL 159
Query: 466 LSDDFEPQLSDFGLASWLSTSSSHLTCTDVAGTFGYLAPEYFMHGKVSEKIDVYAFGIVL 525
L ++ +L+DFGL+ + GT Y+APE ++ D ++FG+++
Sbjct: 160 LDEEGHIKLTDFGLSK--ESIDHEKKAYSFCGTVEYMAPEVVNRRGHTQSADWWSFGVLM 217
Query: 526 LELLSGKKPINSENPKGQESLVMWAK 551
E+L+G P ++ K ++++ AK
Sbjct: 218 FEMLTGTLPFQGKDRKETMTMILKAK 243
>pdb|3QTI|A Chain A, C-Met Kinase In Complex With Nvp-Bvu972
pdb|3QTI|B Chain B, C-Met Kinase In Complex With Nvp-Bvu972
Length = 314
Score = 66.2 bits (160), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 60/212 (28%), Positives = 102/212 (48%), Gaps = 27/212 (12%)
Query: 338 LVGKGGHSHVYRGCL--PDGKEL--AVKILKPSEDV--LKEFASEIEIITALHHRNIISL 391
++G+G VY G L DGK++ AVK L D+ + +F +E I+ H N++SL
Sbjct: 37 VIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSL 96
Query: 392 FGFCFE-DNNLLLVYDFLSRGSLE-----ENLHGNKKDGNAFGWTERYKVAVGVAEALDY 445
G C + + L+V ++ G L E + KD FG + VA+ + +
Sbjct: 97 LGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFG--------LQVAKGMKF 148
Query: 446 LHNSCEQPVIHKDVKSSNILLSDDFEPQLSDFGLASWL---STSSSHLTCTDVAGTFGYL 502
L + +H+D+ + N +L + F +++DFGLA + S H T ++
Sbjct: 149 L---ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVH-NKTGAKLPVKWM 204
Query: 503 APEYFMHGKVSEKIDVYAFGIVLLELLSGKKP 534
A E K + K DV++FG++L EL++ P
Sbjct: 205 ALESLQTQKFTTKSDVWSFGVLLWELMTRGAP 236
>pdb|3A4P|A Chain A, Human C-Met Kinase Domain Complexed With
6-Benzyloxyquinoline Inhibitor
Length = 319
Score = 66.2 bits (160), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 60/212 (28%), Positives = 102/212 (48%), Gaps = 27/212 (12%)
Query: 338 LVGKGGHSHVYRGCL--PDGKEL--AVKILKPSEDV--LKEFASEIEIITALHHRNIISL 391
++G+G VY G L DGK++ AVK L D+ + +F +E I+ H N++SL
Sbjct: 42 VIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSL 101
Query: 392 FGFCFE-DNNLLLVYDFLSRGSLE-----ENLHGNKKDGNAFGWTERYKVAVGVAEALDY 445
G C + + L+V ++ G L E + KD FG + VA+ + +
Sbjct: 102 LGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFG--------LQVAKGMKF 153
Query: 446 LHNSCEQPVIHKDVKSSNILLSDDFEPQLSDFGLASWL---STSSSHLTCTDVAGTFGYL 502
L + +H+D+ + N +L + F +++DFGLA + S H T ++
Sbjct: 154 L---ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVH-NKTGAKLPVKWM 209
Query: 503 APEYFMHGKVSEKIDVYAFGIVLLELLSGKKP 534
A E K + K DV++FG++L EL++ P
Sbjct: 210 ALESLQTQKFTTKSDVWSFGVLLWELMTRGAP 241
>pdb|2I0V|A Chain A, C-Fms Tyrosine Kinase In Complex With A Quinolone
Inhibitor
pdb|2I0Y|A Chain A, Cfms Tyrosine Kinase (Fgf Kid) In Complex With An
Arylamide Inhibitor
pdb|3DPK|A Chain A, Cfms Tyrosine Kinase In Complex With A Pyridopyrimidinone
Inhibitor
pdb|3KRJ|A Chain A, Cfms Tyrosine Kinase In Complex With
4-Cyano-1h-Imidazole-2-Carboxylic Acid
(2-Cyclohex-1-Enyl-4-Piperidin-4-Yl-Phenyl)-Amide
pdb|3KRL|A Chain A, Cfms Tyrosine Kinase In Complex With
5-Cyano-Furan-2-Carboxylic Acid
[4-(4-Methyl-Piperazin-1-Yl)-2-Piperidin-1-Yl-Phenyl]-
Amide
Length = 335
Score = 66.2 bits (160), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 47/189 (24%), Positives = 93/189 (49%), Gaps = 18/189 (9%)
Query: 357 ELAVKILKPSE--DVLKEFASEIEIITAL-HHRNIISLFGFCFEDNNLLLVYDFLSRGSL 413
++AVK+LK + D + SE++I++ L H NI++L G C +L++ ++ G L
Sbjct: 78 KVAVKMLKSTAHADEKEALMSELKIMSHLGQHENIVNLLGACTHGGPVLVITEYCCYGDL 137
Query: 414 EENLHGNKKDGNAFGWTERYK------------VAVGVAEALDYLHNSCEQPVIHKDVKS 461
L + G + + + + VA+ + +L + IH+DV +
Sbjct: 138 LNFLRRKRPPGLEYSYNPSHNPEEQLSSRDLLHFSSQVAQGMAFL---ASKNCIHRDVAA 194
Query: 462 SNILLSDDFEPQLSDFGLASWLSTSSSHLTCTDVAGTFGYLAPEYFMHGKVSEKIDVYAF 521
N+LL++ ++ DFGLA + S+++ + ++APE + + DV+++
Sbjct: 195 RNVLLTNGHVAKIGDFGLARDIMNDSNYIVKGNARLPVKWMAPESIFDCVYTVQSDVWSY 254
Query: 522 GIVLLELLS 530
GI+L E+ S
Sbjct: 255 GILLWEIFS 263
>pdb|4AN2|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4AN3|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4AN9|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4ANB|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs
Length = 301
Score = 66.2 bits (160), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 50/188 (26%), Positives = 96/188 (51%), Gaps = 20/188 (10%)
Query: 353 PDGKELAVKIL----KPSEDVLKEFASEIEIITALHHRNIISLFGFCFEDNNLLLVYDFL 408
P G +A K++ KP+ + + E++++ + I+ +G + D + + + +
Sbjct: 32 PSGLVMARKLIHLEIKPA--IRNQIIRELQVLHECNSPYIVGFYGAFYSDGEISICMEHM 89
Query: 409 SRGSLEENLHGNKKDGNAFGWTERY--KVAVGVAEALDYLHNSCEQPVIHKDVKSSNILL 466
GSL++ L KK G E+ KV++ V + L YL + ++H+DVK SNIL+
Sbjct: 90 DGGSLDQVL---KKAGRI---PEQILGKVSIAVIKGLTYLRE--KHKIMHRDVKPSNILV 141
Query: 467 SDDFEPQLSDFGLASWLSTSSSHLTCTDVAGTFGYLAPEYFMHGKVSEKIDVYAFGIVLL 526
+ E +L DFG++ L ++ + GT Y++PE S + D+++ G+ L+
Sbjct: 142 NSRGEIKLCDFGVSGQLIDEMAN----EFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLV 197
Query: 527 ELLSGKKP 534
E+ G+ P
Sbjct: 198 EMAVGRYP 205
>pdb|4DYM|A Chain A, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With The Imidazo[1,2-B]pyridazine Inhibitor K00135
Length = 301
Score = 66.2 bits (160), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 62/212 (29%), Positives = 100/212 (47%), Gaps = 33/212 (15%)
Query: 339 VGKGGHSHVYRGCLPDGKELAVKILKPSEDVLKEFASEIEI--ITALHHRNIISLFGFCF 396
VGKG + V+RG G+ +AVKI ++ K + E E+ L H NI+ GF
Sbjct: 16 VGKGRYGEVWRGSW-QGENVAVKIFSSRDE--KSWFRETELYNTVMLRHENIL---GFIA 69
Query: 397 ED-------NNLLLVYDFLSRGSLEENLHGNKKDGNAFGWTERYKVAVGVAEALDYLH-- 447
D L L+ + GSL + L D + ++ + +A L +LH
Sbjct: 70 SDMTSRHSSTQLWLITHYHEMGSLYDYLQLTTLDTVSC-----LRIVLSIASGLAHLHIE 124
Query: 448 --NSCEQPVI-HKDVKSSNILLSDDFEPQLSDFGLASWLSTSSSHLTCTD--VAGTFGYL 502
+ +P I H+D+KS NIL+ + + ++D GLA S S++ L + GT Y+
Sbjct: 125 IFGTQGKPAIAHRDLKSKNILVKKNGQCCIADLGLAVMHSQSTNQLDVGNNPRVGTKRYM 184
Query: 503 APEYFMHG------KVSEKIDVYAFGIVLLEL 528
APE +++D++AFG+VL E+
Sbjct: 185 APEVLDETIQVDCFDSYKRVDIWAFGLVLWEV 216
>pdb|3NZ0|A Chain A, Non-Phosphorylated Tyk2 Kinase With Cmp6
Length = 302
Score = 66.2 bits (160), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 53/181 (29%), Positives = 87/181 (48%), Gaps = 13/181 (7%)
Query: 355 GKELAVKILKP--SEDVLKEFASEIEIITALHHRNIISLFGFCFE--DNNLLLVYDFLSR 410
G+ +AVK LK + EI+I+ L+H +II G C + + +L LV +++
Sbjct: 43 GEMVAVKALKADCGPQHRSGWKQEIDILRTLYHEHIIKYKGCCEDQGEKSLQLVMEYVPL 102
Query: 411 GSLEENLHGNKKDGNAFGWTERYKVAVGVAEALDYLHNSCEQPVIHKDVKSSNILLSDDF 470
GSL + L ++ G + A + E + YLH Q IH+++ + N+LL +D
Sbjct: 103 GSLRDYL-----PRHSIGLAQLLLFAQQICEGMAYLHA---QHYIHRNLAARNVLLDNDR 154
Query: 471 EPQLSDFGLASWLSTSSSHLTCT-DVAGTFGYLAPEYFMHGKVSEKIDVYAFGIVLLELL 529
++ DFGLA + + D + APE K DV++FG+ L ELL
Sbjct: 155 LVKIGDFGLAKAVPEGHEYYRVREDGDSPVFWYAPECLKEYKFYYASDVWSFGVTLYELL 214
Query: 530 S 530
+
Sbjct: 215 T 215
>pdb|1RJB|A Chain A, Crystal Structure Of Flt3
Length = 344
Score = 66.2 bits (160), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 51/197 (25%), Positives = 97/197 (49%), Gaps = 27/197 (13%)
Query: 357 ELAVKILKPSEDVLKEFA--SEIEIITAL-HHRNIISLFGFCFEDNNLLLVYDFLSRGSL 413
++AVK+LK D + A SE++++T L H NI++L G C + L++++ G L
Sbjct: 77 QVAVKMLKEKADSSEREALMSELKMMTQLGSHENIVNLLGACTLSGPIYLIFEYCCYGDL 136
Query: 414 EENLHGNKK-------------------DGNAFGWTERYKVAVGVAEALDYLH-NSCEQP 453
L ++ D N + + A VA+ +++L SC
Sbjct: 137 LNYLRSKREKFSEDEIEYENQKRLEEEEDLNVLTFEDLLCFAYQVAKGMEFLEFKSC--- 193
Query: 454 VIHKDVKSSNILLSDDFEPQLSDFGLASWLSTSSSHLTCTDVAGTFGYLAPEYFMHGKVS 513
+H+D+ + N+L++ ++ DFGLA + + S+++ + ++APE G +
Sbjct: 194 -VHRDLAARNVLVTHGKVVKICDFGLARDIMSDSNYVVRGNARLPVKWMAPESLFEGIYT 252
Query: 514 EKIDVYAFGIVLLELLS 530
K DV+++GI+L E+ S
Sbjct: 253 IKSDVWSYGILLWEIFS 269
>pdb|3H9R|A Chain A, Crystal Structure Of The Kinase Domain Of Type I Activin
Receptor (Acvr1) In Complex With Fkbp12 And Dorsomorphin
Length = 330
Score = 66.2 bits (160), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 62/212 (29%), Positives = 100/212 (47%), Gaps = 33/212 (15%)
Query: 339 VGKGGHSHVYRGCLPDGKELAVKILKPSEDVLKEFASEIEI--ITALHHRNIISLFGFCF 396
VGKG + V+RG G+ +AVKI ++ K + E E+ L H NI+ GF
Sbjct: 45 VGKGRYGEVWRGSW-QGENVAVKIFSSRDE--KSWFRETELYNTVMLRHENIL---GFIA 98
Query: 397 ED-------NNLLLVYDFLSRGSLEENLHGNKKDGNAFGWTERYKVAVGVAEALDYLH-- 447
D L L+ + GSL + L D + ++ + +A L +LH
Sbjct: 99 SDMTSRHSSTQLWLITHYHEMGSLYDYLQLTTLDTVSC-----LRIVLSIASGLAHLHIE 153
Query: 448 --NSCEQPVI-HKDVKSSNILLSDDFEPQLSDFGLASWLSTSSSHLTCTD--VAGTFGYL 502
+ +P I H+D+KS NIL+ + + ++D GLA S S++ L + GT Y+
Sbjct: 154 IFGTQGKPAIAHRDLKSKNILVKKNGQCCIADLGLAVMHSQSTNQLDVGNNPRVGTKRYM 213
Query: 503 APEYFMHG------KVSEKIDVYAFGIVLLEL 528
APE +++D++AFG+VL E+
Sbjct: 214 APEVLDETIQVDCFDSYKRVDIWAFGLVLWEV 245
>pdb|2YJR|A Chain A, Structure Of F1174l Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 65.9 bits (159), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 56/216 (25%), Positives = 97/216 (44%), Gaps = 18/216 (8%)
Query: 339 VGKGGHSHVYRGCL------PDGKELAVKILKP--SEDVLKEFASEIEIITALHHRNIIS 390
+G G VY G + P ++AVK L SE +F E II+ L+H+NI+
Sbjct: 53 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKLNHQNIVR 112
Query: 391 LFGFCFEDNNLLLVYDFLSRGSLEENLHGNKK---DGNAFGWTERYKVAVGVAEALDYLH 447
G + ++ + ++ G L+ L + ++ + VA +A YL
Sbjct: 113 CIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLE 172
Query: 448 NSCEQPVIHKDVKSSNILLS---DDFEPQLSDFGLASWLSTSSSHLTCTDVAGTFGYLAP 504
E IH+D+ + N LL+ ++ DFG+A + +S + ++ P
Sbjct: 173 ---ENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVKWMPP 229
Query: 505 EYFMHGKVSEKIDVYAFGIVLLELLS-GKKPINSEN 539
E FM G + K D ++FG++L E+ S G P S++
Sbjct: 230 EAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKS 265
>pdb|4E1Z|A Chain A, Structure Of Mouse Tyk-2 Complexed To A 3-Aminoindazole
Inhibitor
Length = 291
Score = 65.9 bits (159), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 52/181 (28%), Positives = 86/181 (47%), Gaps = 13/181 (7%)
Query: 355 GKELAVKILKPS--EDVLKEFASEIEIITALHHRNIISLFGFCFE--DNNLLLVYDFLSR 410
G+ +AVK LK + + EIEI+ L+H +I+ G C + + ++ LV +++
Sbjct: 38 GEMVAVKALKEGCGPQLRSGWQREIEILRTLYHEHIVKYKGCCEDQGEKSVQLVMEYVPL 97
Query: 411 GSLEENLHGNKKDGNAFGWTERYKVAVGVAEALDYLHNSCEQPVIHKDVKSSNILLSDDF 470
GSL + L + G + A + E + YLH Q IH+ + + N+LL +D
Sbjct: 98 GSLRDYL-----PRHCVGLAQLLLFAQQICEGMAYLHA---QHYIHRALAARNVLLDNDR 149
Query: 471 EPQLSDFGLASWLSTSSSHLTCT-DVAGTFGYLAPEYFMHGKVSEKIDVYAFGIVLLELL 529
++ DFGLA + + D + APE K DV++FG+ L ELL
Sbjct: 150 LVKIGDFGLAKAVPEGHEYYRVREDGDSPVFWYAPECLKECKFYYASDVWSFGVTLYELL 209
Query: 530 S 530
+
Sbjct: 210 T 210
>pdb|3LXN|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
pdb|3LXP|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
Length = 318
Score = 65.9 bits (159), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 56/182 (30%), Positives = 87/182 (47%), Gaps = 15/182 (8%)
Query: 355 GKELAVKILKPSEDVLKE--FASEIEIITALHHRNIISLFGFCFEDN---NLLLVYDFLS 409
G+ +AVK LK + EI+I+ L+H +II G C ED +L LV +++
Sbjct: 60 GEMVAVKALKADAGPQHRSGWKQEIDILRTLYHEHIIKYKGCC-EDAGAASLQLVMEYVP 118
Query: 410 RGSLEENLHGNKKDGNAFGWTERYKVAVGVAEALDYLHNSCEQPVIHKDVKSSNILLSDD 469
GSL + L ++ G + A + E + YLH Q IH+D+ + N+LL +D
Sbjct: 119 LGSLRDYL-----PRHSIGLAQLLLFAQQICEGMAYLHA---QHYIHRDLAARNVLLDND 170
Query: 470 FEPQLSDFGLASWLSTS-SSHLTCTDVAGTFGYLAPEYFMHGKVSEKIDVYAFGIVLLEL 528
++ DFGLA + + D + APE K DV++FG+ L EL
Sbjct: 171 RLVKIGDFGLAKAVPEGHEXYRVREDGDSPVFWYAPECLKEYKFYYASDVWSFGVTLYEL 230
Query: 529 LS 530
L+
Sbjct: 231 LT 232
>pdb|4E20|A Chain A, Structure Of Mouse Tyk-2 Complexed To A 3-Aminoindazole
Inhibitor
Length = 290
Score = 65.9 bits (159), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 52/181 (28%), Positives = 86/181 (47%), Gaps = 13/181 (7%)
Query: 355 GKELAVKILKPS--EDVLKEFASEIEIITALHHRNIISLFGFCFE--DNNLLLVYDFLSR 410
G+ +AVK LK + + EIEI+ L+H +I+ G C + + ++ LV +++
Sbjct: 37 GEMVAVKALKEGCGPQLRSGWQREIEILRTLYHEHIVKYKGCCEDQGEKSVQLVMEYVPL 96
Query: 411 GSLEENLHGNKKDGNAFGWTERYKVAVGVAEALDYLHNSCEQPVIHKDVKSSNILLSDDF 470
GSL + L + G + A + E + YLH Q IH+ + + N+LL +D
Sbjct: 97 GSLRDYL-----PRHCVGLAQLLLFAQQICEGMAYLHA---QHYIHRALAARNVLLDNDR 148
Query: 471 EPQLSDFGLASWLSTSSSHLTCT-DVAGTFGYLAPEYFMHGKVSEKIDVYAFGIVLLELL 529
++ DFGLA + + D + APE K DV++FG+ L ELL
Sbjct: 149 LVKIGDFGLAKAVPEGHEYYRVREDGDSPVFWYAPECLKECKFYYASDVWSFGVTLYELL 208
Query: 530 S 530
+
Sbjct: 209 T 209
>pdb|3ZGW|A Chain A, Crystal Structure Of Maternal Embryonic Leucine Zipper
Kinase (melk) In Complex With Amp-pnp
Length = 347
Score = 65.9 bits (159), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 63/235 (26%), Positives = 108/235 (45%), Gaps = 23/235 (9%)
Query: 339 VGKGGHSHVYRGC-LPDGKELAVKILKPSE--DVLKEFASEIEIITALHHRNIISLFGFC 395
+G GG + V C + G+ +A+KI+ + L +EIE + L H++I L+
Sbjct: 18 IGTGGFAKVKLACHILTGEMVAIKIMDKNTLGSDLPRIKTEIEALKNLRHQHICQLYHVL 77
Query: 396 FEDNNLLLVYDFLSRGSLEENLHGNKKDGNAFGWTERYKVAVGVAEALDYLHNSCEQPVI 455
N + +V ++ G L + + + E V + A+ Y+H+ Q
Sbjct: 78 ETANKIFMVLEYCPGGELFDYIISQDR----LSEEETRVVFRQIVSAVAYVHS---QGYA 130
Query: 456 HKDVKSSNILLSDDFEPQLSDFGL-ASWLSTSSSHL-TCTDVAGTFGYLAPEYFMHGK-- 511
H+D+K N+L + + +L DFGL A HL TC G+ Y APE + GK
Sbjct: 131 HRDLKPENLLFDEYHKLKLIDFGLCAKPKGNKDYHLQTC---CGSLAYAAPE-LIQGKSY 186
Query: 512 VSEKIDVYAFGIVLLELLSGKKPINSENPKGQESLVMWAKPILKDGKVSQLLDPS 566
+ + DV++ GI+L L+ G P + +N + ++ K + V + L PS
Sbjct: 187 LGSEADVWSMGILLYVLMCGFLPFDDDN-----VMALYKKIMRGKYDVPKWLSPS 236
>pdb|2OO8|X Chain X, Synthesis, Structural Analysis, And Sar Studies Of
Triazine Derivatives As Potent, Selective Tie-2
Inhibitors
pdb|2OSC|A Chain A, Synthesis, Structural Analysis, And Sar Studies Of
Triazine Derivatives As Potent, Selective Tie-2
Inhibitors
pdb|2P4I|A Chain A, Evolution Of A Highly Selective And Potent
2-(Pyridin-2-Yl)- 1,3,5-Triazine Tie-2 Kinase Inhibitor
pdb|2P4I|B Chain B, Evolution Of A Highly Selective And Potent
2-(Pyridin-2-Yl)- 1,3,5-Triazine Tie-2 Kinase Inhibitor
pdb|3L8P|A Chain A, Crystal Structure Of Cytoplasmic Kinase Domain Of Tie2
Complexed With Inhibitor Cep11207
Length = 317
Score = 65.9 bits (159), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 53/211 (25%), Positives = 103/211 (48%), Gaps = 24/211 (11%)
Query: 338 LVGKGGHSHVYRGCLP-DGKEL--AVKILK--PSEDVLKEFASEIEIITAL-HHRNIISL 391
++G+G V + + DG + A+K +K S+D ++FA E+E++ L HH NII+L
Sbjct: 22 VIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNIINL 81
Query: 392 FGFCFEDNNLLLVYDFLSRGSLEENLHGNK------------KDGNAFGWTERYKVAVGV 439
G C L L ++ G+L + L ++ + + A V
Sbjct: 82 LGACEHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADV 141
Query: 440 AEALDYLHNSCEQPVIHKDVKSSNILLSDDFEPQLSDFGLASWLSTSSSHLTCTDVAGTF 499
A +DYL ++ IH+D+ + NIL+ +++ +++DFGL+ ++ T
Sbjct: 142 ARGMDYL---SQKQFIHRDLAARNILVGENYVAKIADFGLS---RGQEVYVKKTMGRLPV 195
Query: 500 GYLAPEYFMHGKVSEKIDVYAFGIVLLELLS 530
++A E + + DV+++G++L E++S
Sbjct: 196 RWMAIESLNYSVYTTNSDVWSYGVLLWEIVS 226
>pdb|1XJD|A Chain A, Crystal Structure Of Pkc-Theta Complexed With
Staurosporine At 2a Resolution
Length = 345
Score = 65.5 bits (158), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 53/216 (24%), Positives = 101/216 (46%), Gaps = 19/216 (8%)
Query: 332 NFLPEYLVGKGGHSHVYRGCLPDGKEL-AVKILKPS-----EDVLKEFASEIEIITALHH 385
+F+ ++GKG V+ + A+K LK +DV + + A H
Sbjct: 18 DFILHKMLGKGSFGKVFLAEFKKTNQFFAIKALKKDVVLMDDDVECTMVEKRVLSLAWEH 77
Query: 386 RNIISLFGFCFEDNNLLLVYDFLSRGSLEENLHGNKKDGNAFGWTERYKVAVGVAEALDY 445
+ +F NL V ++L+ G L ++ K F + A + L +
Sbjct: 78 PFLTHMFCTFQTKENLFFVMEYLNGGDLMYHIQSCHK----FDLSRATFYAAEIILGLQF 133
Query: 446 LHNSCEQPVIHKDVKSSNILLSDDFEPQLSDFGLA--SWLSTSSSHLTCTDVAGTFGYLA 503
LH+ + ++++D+K NILL D +++DFG+ + L + ++ C GT Y+A
Sbjct: 134 LHS---KGIVYRDLKLDNILLDKDGHIKIADFGMCKENMLGDAKTNXFC----GTPDYIA 186
Query: 504 PEYFMHGKVSEKIDVYAFGIVLLELLSGKKPINSEN 539
PE + K + +D ++FG++L E+L G+ P + ++
Sbjct: 187 PEILLGQKYNHSVDWWSFGVLLYEMLIGQSPFHGQD 222
>pdb|1FVR|A Chain A, Tie2 Kinase Domain
pdb|1FVR|B Chain B, Tie2 Kinase Domain
Length = 327
Score = 65.5 bits (158), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 53/211 (25%), Positives = 103/211 (48%), Gaps = 24/211 (11%)
Query: 338 LVGKGGHSHVYRGCLP-DGKEL--AVKILK--PSEDVLKEFASEIEIITAL-HHRNIISL 391
++G+G V + + DG + A+K +K S+D ++FA E+E++ L HH NII+L
Sbjct: 32 VIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNIINL 91
Query: 392 FGFCFEDNNLLLVYDFLSRGSLEENLHGNK------------KDGNAFGWTERYKVAVGV 439
G C L L ++ G+L + L ++ + + A V
Sbjct: 92 LGACEHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADV 151
Query: 440 AEALDYLHNSCEQPVIHKDVKSSNILLSDDFEPQLSDFGLASWLSTSSSHLTCTDVAGTF 499
A +DYL ++ IH+D+ + NIL+ +++ +++DFGL+ ++ T
Sbjct: 152 ARGMDYL---SQKQFIHRDLAARNILVGENYVAKIADFGLS---RGQEVYVKKTMGRLPV 205
Query: 500 GYLAPEYFMHGKVSEKIDVYAFGIVLLELLS 530
++A E + + DV+++G++L E++S
Sbjct: 206 RWMAIESLNYSVYTTNSDVWSYGVLLWEIVS 236
>pdb|4AAA|A Chain A, Crystal Structure Of The Human Cdkl2 Kinase Domain
pdb|4BBM|A Chain A, Crystal Structure Of The Human Cdkl2 Kinase Domain With
Bound Tcs 2312
pdb|4BBM|B Chain B, Crystal Structure Of The Human Cdkl2 Kinase Domain With
Bound Tcs 2312
Length = 331
Score = 65.5 bits (158), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 57/201 (28%), Positives = 98/201 (48%), Gaps = 16/201 (7%)
Query: 338 LVGKGGHSHVYRGCLPD-GKELAVKILKPSED--VLKEFA-SEIEIITALHHRNIISLFG 393
LVG+G + V + D G+ +A+K S+D ++K+ A EI+++ L H N+++L
Sbjct: 32 LVGEGSYGMVMKCRNKDTGRIVAIKKFLESDDDKMVKKIAMREIKLLKQLRHENLVNLLE 91
Query: 394 FCFEDNNLLLVYDFLSRGSLEE-NLHGNKKDGNAFGWTERYKVAVGVAEALDYLHNSCEQ 452
C + LV++F+ L++ L N D + ++Y + + HN
Sbjct: 92 VCKKKKRWYLVFEFVDHTILDDLELFPNGLD---YQVVQKYLFQIINGIGFCHSHN---- 144
Query: 453 PVIHKDVKSSNILLSDDFEPQLSDFGLASWLSTSSSHLTCTDVAGTFGYLAPEYFMHG-K 511
+IH+D+K NIL+S +L DFG A L+ D T Y APE + K
Sbjct: 145 -IIHRDIKPENILVSQSGVVKLCDFGFARTLAAPGE--VYDDEVATRWYRAPELLVGDVK 201
Query: 512 VSEKIDVYAFGIVLLELLSGK 532
+ +DV+A G ++ E+ G+
Sbjct: 202 YGKAVDVWAIGCLVTEMFMGE 222
>pdb|3BEA|A Chain A, Cfms Tyrosine Kinase (Tie2 Kid) In Complex With A
Pyrimidinopyridone Inhibitor
Length = 333
Score = 65.5 bits (158), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 48/187 (25%), Positives = 92/187 (49%), Gaps = 16/187 (8%)
Query: 357 ELAVKILKPSE--DVLKEFASEIEIITAL-HHRNIISLFGFCFEDNNLLLVYDFLSRGSL 413
++AVK+LK + D + SE++I++ L H NI++L G C +L++ ++ G L
Sbjct: 78 KVAVKMLKSTAHADEKEALMSELKIMSHLGQHENIVNLLGACTHGGPVLVITEYCCYGDL 137
Query: 414 EENLHGNKKDGNAFGWTERYKVAVGVAEALDYLHNSCE----------QPVIHKDVKSSN 463
L+ ++ + +A D LH S + + IH+DV + N
Sbjct: 138 ---LNFLRRKSRVLETDPAFAIANSTLSTRDLLHFSSQVAQGMAFLASKNCIHRDVAARN 194
Query: 464 ILLSDDFEPQLSDFGLASWLSTSSSHLTCTDVAGTFGYLAPEYFMHGKVSEKIDVYAFGI 523
+LL++ ++ DFGLA + S+++ + ++APE + + DV+++GI
Sbjct: 195 VLLTNGHVAKIGDFGLARDIMNDSNYIVKGNARLPVKWMAPESIFDCVYTVQSDVWSYGI 254
Query: 524 VLLELLS 530
+L E+ S
Sbjct: 255 LLWEIFS 261
>pdb|4FNX|A Chain A, Crystal Structure Of The Apo R1275q Anaplastic Lymphoma
Kinase Catalytic Domain
pdb|4FNY|A Chain A, Crystal Structure Of The R1275q Anaplastic Lymphoma Kinase
Catalytic Domain In Complex With A Benzoxazole Inhibitor
Length = 327
Score = 65.5 bits (158), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 55/216 (25%), Positives = 96/216 (44%), Gaps = 18/216 (8%)
Query: 339 VGKGGHSHVYRGCL------PDGKELAVKILKP--SEDVLKEFASEIEIITALHHRNIIS 390
+G G VY G + P ++AVK L SE +F E II+ +H+NI+
Sbjct: 39 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVR 98
Query: 391 LFGFCFEDNNLLLVYDFLSRGSLEENLHGNKK---DGNAFGWTERYKVAVGVAEALDYLH 447
G + ++ + ++ G L+ L + ++ + VA +A YL
Sbjct: 99 CIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLE 158
Query: 448 NSCEQPVIHKDVKSSNILLS---DDFEPQLSDFGLASWLSTSSSHLTCTDVAGTFGYLAP 504
E IH+D+ + N LL+ ++ DFG+A + +S + ++ P
Sbjct: 159 ---ENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMAQDIYRASYYRKGGCAMLPVKWMPP 215
Query: 505 EYFMHGKVSEKIDVYAFGIVLLELLS-GKKPINSEN 539
E FM G + K D ++FG++L E+ S G P S++
Sbjct: 216 EAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKS 251
>pdb|4FOB|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 1
pdb|4FOC|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 2
Length = 353
Score = 65.5 bits (158), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 55/216 (25%), Positives = 96/216 (44%), Gaps = 18/216 (8%)
Query: 339 VGKGGHSHVYRGCL------PDGKELAVKILKP--SEDVLKEFASEIEIITALHHRNIIS 390
+G G VY G + P ++AVK L SE +F E II+ +H+NI+
Sbjct: 65 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVR 124
Query: 391 LFGFCFEDNNLLLVYDFLSRGSLEENLHGNKK---DGNAFGWTERYKVAVGVAEALDYLH 447
G + ++ + ++ G L+ L + ++ + VA +A YL
Sbjct: 125 CIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLE 184
Query: 448 NSCEQPVIHKDVKSSNILLS---DDFEPQLSDFGLASWLSTSSSHLTCTDVAGTFGYLAP 504
E IH+D+ + N LL+ ++ DFG+A + +S + ++ P
Sbjct: 185 ---ENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVKWMPP 241
Query: 505 EYFMHGKVSEKIDVYAFGIVLLELLS-GKKPINSEN 539
E FM G + K D ++FG++L E+ S G P S++
Sbjct: 242 EAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKS 277
>pdb|3LCO|A Chain A, Inhibitor Bound To A Dfg-Out Structure Of The Kinase
Domain Of Csf-1r
Length = 324
Score = 65.5 bits (158), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 50/196 (25%), Positives = 96/196 (48%), Gaps = 25/196 (12%)
Query: 357 ELAVKILKPSE--DVLKEFASEIEIITAL-HHRNIISLFGFCFEDNNLLLVYDFLSRGSL 413
++AVK+LK + D + SE++I++ L H NI++L G C +L++ ++ G L
Sbjct: 63 KVAVKMLKSTAHADEKEALMSELKIMSHLGQHENIVNLLGACTHGGPVLVITEYCCYGDL 122
Query: 414 -------EENLHG------------NKKDGNAFGWTERYKVAVGVAEALDYLHNSCEQPV 454
E + G +K+DG + + VA+ + +L +
Sbjct: 123 LNFLRRKAEAMLGPSLAPGQDPEGLDKEDGRPLELRDLLHFSSQVAQGMAFL---ASKNC 179
Query: 455 IHKDVKSSNILLSDDFEPQLSDFGLASWLSTSSSHLTCTDVAGTFGYLAPEYFMHGKVSE 514
IH+DV + N+LL++ ++ DFGLA + S+++ + ++APE +
Sbjct: 180 IHRDVAARNVLLTNGHVAKIGDFGLARDIMNDSNYIVKGNARLPVKWMAPESIFDCVYTV 239
Query: 515 KIDVYAFGIVLLELLS 530
+ DV+++GI+L E+ S
Sbjct: 240 QSDVWSYGILLWEIFS 255
>pdb|1ZXE|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|C Chain C, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|D Chain D, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|E Chain E, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|F Chain F, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
Length = 303
Score = 65.5 bits (158), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 57/231 (24%), Positives = 103/231 (44%), Gaps = 35/231 (15%)
Query: 327 LSATSNFLPEYLVGKGGHSHVY--RGCLPDGKELAVKILKPSEDVLKEFASEIEIITALH 384
L S+F ++G+G V R L D + A+K ++ +E+ L SE+ ++ +L+
Sbjct: 2 LRYASDFEEIAVLGQGAFGQVVKARNAL-DSRYYAIKKIRHTEEKLSTILSEVXLLASLN 60
Query: 385 HRNIISLFGFCFEDNN-------------LLLVYDFLSRGSLEENLHGNKKDGNAFGWTE 431
H+ ++ + E N L + ++ +L + +H + E
Sbjct: 61 HQYVVRYYAAWLERRNFVKPXTAVKKKSTLFIQXEYCENRTLYDLIHSENLNQQR---DE 117
Query: 432 RYKVAVGVAEALDYLHNSCEQPVIHKDVKSSNILLSDDFEPQLSDFGLAS-------WLS 484
+++ + EAL Y+H+ Q +IH+++K NI + + ++ DFGLA L
Sbjct: 118 YWRLFRQILEALSYIHS---QGIIHRNLKPXNIFIDESRNVKIGDFGLAKNVHRSLDILK 174
Query: 485 TSSSHL-----TCTDVAGTFGYLAPEYF-MHGKVSEKIDVYAFGIVLLELL 529
S +L T GT Y+A E G +EKID Y+ GI+ E +
Sbjct: 175 LDSQNLPGSSDNLTSAIGTAXYVATEVLDGTGHYNEKIDXYSLGIIFFEXI 225
>pdb|3AOX|A Chain A, X-Ray Crystal Structure Of Human Anaplastic Lymphoma
Kinase In Complex With Ch5424802
Length = 344
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 55/216 (25%), Positives = 96/216 (44%), Gaps = 18/216 (8%)
Query: 339 VGKGGHSHVYRGCL------PDGKELAVKILKP--SEDVLKEFASEIEIITALHHRNIIS 390
+G G VY G + P ++AVK L SE +F E II+ +H+NI+
Sbjct: 55 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVR 114
Query: 391 LFGFCFEDNNLLLVYDFLSRGSLEENLHGNKK---DGNAFGWTERYKVAVGVAEALDYLH 447
G + ++ + ++ G L+ L + ++ + VA +A YL
Sbjct: 115 CIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLE 174
Query: 448 NSCEQPVIHKDVKSSNILLS---DDFEPQLSDFGLASWLSTSSSHLTCTDVAGTFGYLAP 504
E IH+D+ + N LL+ ++ DFG+A + +S + ++ P
Sbjct: 175 ---ENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVKWMPP 231
Query: 505 EYFMHGKVSEKIDVYAFGIVLLELLS-GKKPINSEN 539
E FM G + K D ++FG++L E+ S G P S++
Sbjct: 232 EAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKS 267
>pdb|4FNZ|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Piperidine-Carboxamide Inhibitor 2
Length = 327
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 55/216 (25%), Positives = 96/216 (44%), Gaps = 18/216 (8%)
Query: 339 VGKGGHSHVYRGCL------PDGKELAVKILKP--SEDVLKEFASEIEIITALHHRNIIS 390
+G G VY G + P ++AVK L SE +F E II+ +H+NI+
Sbjct: 39 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVR 98
Query: 391 LFGFCFEDNNLLLVYDFLSRGSLEENLHGNKK---DGNAFGWTERYKVAVGVAEALDYLH 447
G + ++ + ++ G L+ L + ++ + VA +A YL
Sbjct: 99 CIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLE 158
Query: 448 NSCEQPVIHKDVKSSNILLS---DDFEPQLSDFGLASWLSTSSSHLTCTDVAGTFGYLAP 504
E IH+D+ + N LL+ ++ DFG+A + +S + ++ P
Sbjct: 159 ---ENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVKWMPP 215
Query: 505 EYFMHGKVSEKIDVYAFGIVLLELLS-GKKPINSEN 539
E FM G + K D ++FG++L E+ S G P S++
Sbjct: 216 EAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKS 251
>pdb|3G2F|A Chain A, Crystal Structure Of The Kinase Domain Of Bone
Morphogenetic Protein Receptor Type Ii (Bmpr2) At 2.35 A
Resolution
pdb|3G2F|B Chain B, Crystal Structure Of The Kinase Domain Of Bone
Morphogenetic Protein Receptor Type Ii (Bmpr2) At 2.35 A
Resolution
Length = 336
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 62/223 (27%), Positives = 104/223 (46%), Gaps = 44/223 (19%)
Query: 338 LVGKGGHSHVYRGCLPDGKELAVKILKPSEDVLKEFASEIEI--ITALHHRNIISLFGFC 395
L+G+G + VY+G L D + +AVK+ + + F +E I + + H NI F
Sbjct: 20 LIGRGRYGAVYKGSL-DERPVAVKVFSFANR--QNFINEKNIYRVPLMEHDNIAR---FI 73
Query: 396 FEDNNL--------LLVYDFLSRGSLEENLHGNKKDGNAFGWTERYKVAVGVAEALDYLH 447
D + LLV ++ GSL + L + D W ++A V L YLH
Sbjct: 74 VGDERVTADGRMEYLLVMEYYPNGSLXKYLSLHTSD-----WVSSCRLAHSVTRGLAYLH 128
Query: 448 NSCEQ-----PVI-HKDVKSSNILLSDDFEPQLSDFGLASWLSTS-------SSHLTCTD 494
+ P I H+D+ S N+L+ +D +SDFGL+ L+ + + ++
Sbjct: 129 TELPRGDHYKPAISHRDLNSRNVLVKNDGTCVISDFGLSMRLTGNRLVRPGEEDNAAISE 188
Query: 495 VAGTFGYLAPEYFMHGKVS--------EKIDVYAFGIVLLELL 529
V GT Y+APE + G V+ +++D+YA G++ E+
Sbjct: 189 V-GTIRYMAPE-VLEGAVNLRDXESALKQVDMYALGLIYWEIF 229
>pdb|3C7Q|A Chain A, Structure Of Vegfr2 Kinase Domain In Complex With Bibf1120
Length = 316
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 48/189 (25%), Positives = 93/189 (49%), Gaps = 17/189 (8%)
Query: 356 KELAVKILK--PSEDVLKEFASEIEIITAL-HHRNIISLFGFCFEDNN-LLLVYDFLSRG 411
+ +AVK+LK + + SE++I+ + HH N+++L G C + L+++ +F G
Sbjct: 60 RTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFG 119
Query: 412 SLEENLHGNKKDGNAFGWTERYK----------VAVGVAEALDYLHNSCEQPVIHKDVKS 461
+L L + + + + YK + VA+ +++L + IH+D+ +
Sbjct: 120 NLSTYLRSKRNEFVPYKPEDLYKDFLTLEHLIXYSFQVAKGMEFL---ASRKXIHRDLAA 176
Query: 462 SNILLSDDFEPQLSDFGLASWLSTSSSHLTCTDVAGTFGYLAPEYFMHGKVSEKIDVYAF 521
NILLS+ ++ DFGLA + + D ++APE + + DV++F
Sbjct: 177 RNILLSEKNVVKICDFGLARDIXKDPDXVRKGDARLPLKWMAPETIFDRVYTIQSDVWSF 236
Query: 522 GIVLLELLS 530
G++L E+ S
Sbjct: 237 GVLLWEIFS 245
>pdb|2OZO|A Chain A, Autoinhibited Intact Human Zap-70
Length = 613
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 54/197 (27%), Positives = 97/197 (49%), Gaps = 15/197 (7%)
Query: 357 ELAVKILKPSEDV--LKEFASEIEIITALHHRNIISLFGFCFEDNNLLLVYDFLSRGSLE 414
++A+K+LK + +E E +I+ L + I+ L G C + L+LV + G L
Sbjct: 365 DVAIKVLKQGTEKADTEEMMREAQIMHQLDNPYIVRLIGVC-QAEALMLVMEMAGGGPLH 423
Query: 415 ENLHGNKKDGNAFGWTER-YKVAVGVAEALDYLHNSCEQPVIHKDVKSSNILLSDDFEPQ 473
+ L G +++ E ++V++G + YL E+ +H+++ + N+LL + +
Sbjct: 424 KFLVGKREEIPVSNVAELLHQVSMG----MKYLE---EKNFVHRNLAARNVLLVNRHYAK 476
Query: 474 LSDFGLASWLSTSSSHLTCTDVAG-TFGYLAPEYFMHGKVSEKIDVYAFGIVLLELLS-G 531
+SDFGL+ L S+ T + APE K S + DV+++G+ + E LS G
Sbjct: 477 ISDFGLSKALGADDSYYTARSAGKWPLKWYAPECINFRKFSSRSDVWSYGVTMWEALSYG 536
Query: 532 KKPINSENPKGQESLVM 548
+KP KG E +
Sbjct: 537 QKPYKKM--KGPEVMAF 551
>pdb|2YFX|A Chain A, Structure Of L1196m Mutant Anaplastic Lymphoma Kinase In
Complex With Crizotinib
Length = 327
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 55/216 (25%), Positives = 96/216 (44%), Gaps = 18/216 (8%)
Query: 339 VGKGGHSHVYRGCL------PDGKELAVKILKP--SEDVLKEFASEIEIITALHHRNIIS 390
+G G VY G + P ++AVK L SE +F E II+ +H+NI+
Sbjct: 38 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVR 97
Query: 391 LFGFCFEDNNLLLVYDFLSRGSLEENLHGNKK---DGNAFGWTERYKVAVGVAEALDYLH 447
G + ++ + ++ G L+ L + ++ + VA +A YL
Sbjct: 98 CIGVSLQSLPRFILMELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLE 157
Query: 448 NSCEQPVIHKDVKSSNILLS---DDFEPQLSDFGLASWLSTSSSHLTCTDVAGTFGYLAP 504
E IH+D+ + N LL+ ++ DFG+A + +S + ++ P
Sbjct: 158 ---ENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVKWMPP 214
Query: 505 EYFMHGKVSEKIDVYAFGIVLLELLS-GKKPINSEN 539
E FM G + K D ++FG++L E+ S G P S++
Sbjct: 215 EAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKS 250
>pdb|4DCE|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With A Piperidine-Carboxamide Inhibitor
pdb|4DCE|B Chain B, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With A Piperidine-Carboxamide Inhibitor
pdb|4FOD|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 36
Length = 333
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 55/216 (25%), Positives = 96/216 (44%), Gaps = 18/216 (8%)
Query: 339 VGKGGHSHVYRGCL------PDGKELAVKILKP--SEDVLKEFASEIEIITALHHRNIIS 390
+G G VY G + P ++AVK L SE +F E II+ +H+NI+
Sbjct: 45 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVR 104
Query: 391 LFGFCFEDNNLLLVYDFLSRGSLEENLHGNKK---DGNAFGWTERYKVAVGVAEALDYLH 447
G + ++ + ++ G L+ L + ++ + VA +A YL
Sbjct: 105 CIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLE 164
Query: 448 NSCEQPVIHKDVKSSNILLS---DDFEPQLSDFGLASWLSTSSSHLTCTDVAGTFGYLAP 504
E IH+D+ + N LL+ ++ DFG+A + +S + ++ P
Sbjct: 165 ---ENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVKWMPP 221
Query: 505 EYFMHGKVSEKIDVYAFGIVLLELLS-GKKPINSEN 539
E FM G + K D ++FG++L E+ S G P S++
Sbjct: 222 EAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKS 257
>pdb|3LIJ|A Chain A, Crystal Structure Of Full Length Cpcdpk3 (Cgd5_820) In
Complex With Ca2+ And Amppnp
Length = 494
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 60/223 (26%), Positives = 99/223 (44%), Gaps = 28/223 (12%)
Query: 323 YQELLSATSNFLPEYLVGKGGHSHVYRGCLPDGKELAVKILKP---SEDVLKEFASEIEI 379
YQ + S E L+ + +HV R A+KI++ S + E+ +
Sbjct: 39 YQRVKKLGSGAYGEVLLCRDKVTHVER---------AIKIIRKTSVSTSSNSKLLEEVAV 89
Query: 380 ITALHHRNIISLFGFCFEDNNLLLVYDFLSRGSL-EENLHGNKKDGNAFGWTERYKVAVG 438
+ L H NI+ L+ F + N LV + G L +E +H K F + +
Sbjct: 90 LKLLDHPNIMKLYDFFEDKRNYYLVMECYKGGELFDEIIHRMK-----FNEVDAAVIIKQ 144
Query: 439 VAEALDYLHNSCEQPVIHKDVKSSNILLSD---DFEPQLSDFGLASWLSTSSSHLTCTDV 495
V + YLH + ++H+D+K N+LL D ++ DFGL++ +
Sbjct: 145 VLSGVTYLH---KHNIVHRDLKPENLLLESKEKDALIKIVDFGLSAVFENQKK---MKER 198
Query: 496 AGTFGYLAPEYFMHGKVSEKIDVYAFGIVLLELLSGKKPINSE 538
GT Y+APE + K EK DV++ G++L LL+G P +
Sbjct: 199 LGTAYYIAPE-VLRKKYDEKCDVWSIGVILFILLAGYPPFGGQ 240
>pdb|3DXN|A Chain A, Crystal Structure Of The Calcium-dependent Kinase From
Toxoplasma Gondii, 541.m00134, Kinase Domain
Length = 287
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 54/192 (28%), Positives = 86/192 (44%), Gaps = 18/192 (9%)
Query: 355 GKELAVKILKPSEDVLKE----FASEIEIITALHHRNIISLFGFCFEDNNLLLVYDFLSR 410
G E A+KI+K S E+ ++ L H NI+ L+ F + N LV +
Sbjct: 46 GAERAIKIIKKSSVTTTSNSGALLDEVAVLKQLDHPNIMKLYEFFEDKRNYYLVMEVYRG 105
Query: 411 GSLEENLHGNKKDGNAFGWTERYKVAVGVAEALDYLHNSCEQPVIHKDVKSSNILL---S 467
G L + + +K F + + V YLH + ++H+D+K N+LL S
Sbjct: 106 GELFDEIILRQK----FSEVDAAVIMKQVLSGTTYLH---KHNIVHRDLKPENLLLESKS 158
Query: 468 DDFEPQLSDFGLASWLSTSSSHLTCTDVAGTFGYLAPEYFMHGKVSEKIDVYAFGIVLLE 527
D ++ DFGL++ + GT Y+APE + K EK DV++ G++L
Sbjct: 159 RDALIKIVDFGLSAHFEVGGK---MKERLGTAYYIAPE-VLRKKYDEKCDVWSCGVILYI 214
Query: 528 LLSGKKPINSEN 539
LL G P +
Sbjct: 215 LLCGYPPFGGQT 226
>pdb|1A06|A Chain A, Calmodulin-Dependent Protein Kinase From Rat
Length = 332
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 49/170 (28%), Positives = 83/170 (48%), Gaps = 17/170 (10%)
Query: 375 SEIEIITALHHRNIISLFGFCFEDNNLLLVYDFLSRGSLEENLHGNKKDGNAFGWTER-- 432
+EI ++ + H NI++L +L L+ +S G L + + F +TER
Sbjct: 65 NEIAVLHKIKHPNIVALDDIYESGGHLYLIMQLVSGGELFDRIVEK-----GF-YTERDA 118
Query: 433 YKVAVGVAEALDYLHNSCEQPVIHKDVKSSNIL---LSDDFEPQLSDFGLASWLSTSSSH 489
++ V +A+ YLH+ ++H+D+K N+L L +D + +SDFGL+ S
Sbjct: 119 SRLIFQVLDAVKYLHDLG---IVHRDLKPENLLYYSLDEDSKIMISDFGLSKMEDPGS-- 173
Query: 490 LTCTDVAGTFGYLAPEYFMHGKVSEKIDVYAFGIVLLELLSGKKPINSEN 539
+ GT GY+APE S+ +D ++ G++ LL G P EN
Sbjct: 174 -VLSTACGTPGYVAPEVLAQKPYSKAVDCWSIGVIAYILLCGYPPFYDEN 222
>pdb|2XP2|A Chain A, Structure Of The Human Anaplastic Lymphoma Kinase In
Complex With Crizotinib (Pf-02341066)
Length = 327
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 55/216 (25%), Positives = 96/216 (44%), Gaps = 18/216 (8%)
Query: 339 VGKGGHSHVYRGCL------PDGKELAVKILKP--SEDVLKEFASEIEIITALHHRNIIS 390
+G G VY G + P ++AVK L SE +F E II+ +H+NI+
Sbjct: 38 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVR 97
Query: 391 LFGFCFEDNNLLLVYDFLSRGSLEENLHGNKK---DGNAFGWTERYKVAVGVAEALDYLH 447
G + ++ + ++ G L+ L + ++ + VA +A YL
Sbjct: 98 CIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLE 157
Query: 448 NSCEQPVIHKDVKSSNILLS---DDFEPQLSDFGLASWLSTSSSHLTCTDVAGTFGYLAP 504
E IH+D+ + N LL+ ++ DFG+A + +S + ++ P
Sbjct: 158 ---ENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVKWMPP 214
Query: 505 EYFMHGKVSEKIDVYAFGIVLLELLS-GKKPINSEN 539
E FM G + K D ++FG++L E+ S G P S++
Sbjct: 215 EAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKS 250
>pdb|2AC5|A Chain A, Structure Of Human Mnk2 Kinase Domain Mutant D228g
pdb|2HW7|A Chain A, Crystal Structure Of Mnk2-D228g In Complex With
Staurosporine
Length = 316
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 66/219 (30%), Positives = 111/219 (50%), Gaps = 25/219 (11%)
Query: 334 LPEYLVGKGGHSHVYRGC--LPDGKELAVKIL-KPSEDVLKEFASEIEIITALH-HRNII 389
L E ++G+G H+ V + C L +E AVKI+ K + E+E++ HRN++
Sbjct: 16 LQEDVLGEGAHARV-QTCINLITSQEYAVKIIEKQPGHIRSRVFREVEMLYQCQGHRNVL 74
Query: 390 SLFGFCFEDNNLLLVYDFLSRGSLEENLHGNKKDGNAFGWTERYKVAVGVAEALDYLHNS 449
L F E++ LV++ + GS+ ++H + F E V VA ALD+LHN
Sbjct: 75 ELIEFFEEEDRFYLVFEKMRGGSILSHIHKRRH----FNELEASVVVQDVASALDFLHN- 129
Query: 450 CEQPVIHKDVKSSNILLS--DDFEP-QLSDFGLASW--LSTSSSHLTCTDV---AGTFGY 501
+ + H+D+K NIL + P ++ DFGL S L+ S ++ ++ G+ Y
Sbjct: 130 --KGIAHRDLKPENILCEHPNQVSPVKICDFGLGSGIKLNGDCSPISTPELLTPCGSAEY 187
Query: 502 LAPE----YFMHGKVSEK-IDVYAFGIVLLELLSGKKPI 535
+APE + + +K D+++ G++L LLSG P
Sbjct: 188 MAPEVVEAFSEEASIYDKRCDLWSLGVILYILLSGYPPF 226
>pdb|2YHV|A Chain A, Structure Of L1196m Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 55/216 (25%), Positives = 96/216 (44%), Gaps = 18/216 (8%)
Query: 339 VGKGGHSHVYRGCL------PDGKELAVKILKP--SEDVLKEFASEIEIITALHHRNIIS 390
+G G VY G + P ++AVK L SE +F E II+ +H+NI+
Sbjct: 53 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVR 112
Query: 391 LFGFCFEDNNLLLVYDFLSRGSLEENLHGNKK---DGNAFGWTERYKVAVGVAEALDYLH 447
G + ++ + ++ G L+ L + ++ + VA +A YL
Sbjct: 113 CIGVSLQSLPRFILMELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLE 172
Query: 448 NSCEQPVIHKDVKSSNILLS---DDFEPQLSDFGLASWLSTSSSHLTCTDVAGTFGYLAP 504
E IH+D+ + N LL+ ++ DFG+A + +S + ++ P
Sbjct: 173 ---ENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVKWMPP 229
Query: 505 EYFMHGKVSEKIDVYAFGIVLLELLS-GKKPINSEN 539
E FM G + K D ++FG++L E+ S G P S++
Sbjct: 230 EAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKS 265
>pdb|3HZT|A Chain A, Crystal Structure Of Toxoplasma Gondii Cdpk3,
Tgme49_105860
Length = 467
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 54/192 (28%), Positives = 86/192 (44%), Gaps = 18/192 (9%)
Query: 355 GKELAVKILKPSEDVLKE----FASEIEIITALHHRNIISLFGFCFEDNNLLLVYDFLSR 410
G E A+KI+K S E+ ++ L H NI+ L+ F + N LV +
Sbjct: 29 GAERAIKIIKKSSVTTTSNSGALLDEVAVLKQLDHPNIMKLYEFFEDKRNYYLVMEVYRG 88
Query: 411 GSLEENLHGNKKDGNAFGWTERYKVAVGVAEALDYLHNSCEQPVIHKDVKSSNILL---S 467
G L + + +K F + + V YLH + ++H+D+K N+LL S
Sbjct: 89 GELFDEIILRQK----FSEVDAAVIMKQVLSGTTYLH---KHNIVHRDLKPENLLLESKS 141
Query: 468 DDFEPQLSDFGLASWLSTSSSHLTCTDVAGTFGYLAPEYFMHGKVSEKIDVYAFGIVLLE 527
D ++ DFGL++ + GT Y+APE + K EK DV++ G++L
Sbjct: 142 RDALIKIVDFGLSAHFEVGGK---MKERLGTAYYIAPE-VLRKKYDEKCDVWSCGVILYI 197
Query: 528 LLSGKKPINSEN 539
LL G P +
Sbjct: 198 LLCGYPPFGGQT 209
>pdb|2Z7Q|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk-1 Bound To Amp-Pcp
pdb|2Z7R|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk1 Bound To Staurosporine
pdb|2Z7S|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk1 Bound To Purvalnol A
Length = 321
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 60/225 (26%), Positives = 111/225 (49%), Gaps = 24/225 (10%)
Query: 338 LVGKGGHSHVY---RGCLPDGKEL-AVKILKPSEDVLKEFAS---EIEIITALHHRNIIS 390
++G+G V+ + PD L A+K+LK + +++ E +I+ ++H ++
Sbjct: 35 VLGQGSFGKVFLVRKVTRPDSGHLYAMKVLKKATLKVRDRVRTKMERDILADVNHPFVVK 94
Query: 391 LFGFCFE-DNNLLLVYDFLSRGSLEENLHGNKKDGNAFGWTE---RYKVAVGVAEALDYL 446
L + F+ + L L+ DFL G L L +TE ++ +A +A LD+L
Sbjct: 95 LH-YAFQTEGKLYLILDFLRGGDLFTRL------SKEVMFTEEDVKFYLA-ELALGLDHL 146
Query: 447 HNSCEQPVIHKDVKSSNILLSDDFEPQLSDFGLASWLSTSSSHLTCTDVAGTFGYLAPEY 506
H+ +I++D+K NILL ++ +L+DFGL+ GT Y+APE
Sbjct: 147 HSLG---IIYRDLKPENILLDEEGHIKLTDFGLSK--EAIDHEKKAYSFCGTVEYMAPEV 201
Query: 507 FMHGKVSEKIDVYAFGIVLLELLSGKKPINSENPKGQESLVMWAK 551
S D +++G+++ E+L+G P ++ K +L++ AK
Sbjct: 202 VNRQGHSHSADWWSYGVLMFEMLTGSLPFQGKDRKETMTLILKAK 246
>pdb|2XB7|A Chain A, Structure Of Human Anaplastic Lymphoma Kinase In Complex
With Nvp- Tae684
pdb|2XBA|A Chain A, Structure Of Human Anaplastic Lymphoma Kinase In Complex
With Pha-E429
Length = 315
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 55/216 (25%), Positives = 96/216 (44%), Gaps = 18/216 (8%)
Query: 339 VGKGGHSHVYRGCL------PDGKELAVKILKP--SEDVLKEFASEIEIITALHHRNIIS 390
+G G VY G + P ++AVK L SE +F E II+ +H+NI+
Sbjct: 30 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVR 89
Query: 391 LFGFCFEDNNLLLVYDFLSRGSLEENLHGNKK---DGNAFGWTERYKVAVGVAEALDYLH 447
G + ++ + ++ G L+ L + ++ + VA +A YL
Sbjct: 90 CIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLE 149
Query: 448 NSCEQPVIHKDVKSSNILLS---DDFEPQLSDFGLASWLSTSSSHLTCTDVAGTFGYLAP 504
E IH+D+ + N LL+ ++ DFG+A + +S + ++ P
Sbjct: 150 ---ENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVKWMPP 206
Query: 505 EYFMHGKVSEKIDVYAFGIVLLELLS-GKKPINSEN 539
E FM G + K D ++FG++L E+ S G P S++
Sbjct: 207 EAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKS 242
>pdb|4FG9|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-320 In Complex With Atp
pdb|4FG9|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-320 In Complex With Atp
pdb|4FGB|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I Apo Form
Length = 320
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 49/170 (28%), Positives = 83/170 (48%), Gaps = 17/170 (10%)
Query: 375 SEIEIITALHHRNIISLFGFCFEDNNLLLVYDFLSRGSLEENLHGNKKDGNAFGWTER-- 432
+EI ++ + H NI++L +L L+ +S G L + + F +TER
Sbjct: 65 NEIAVLHKIKHPNIVALDDIYESGGHLYLIMQLVSGGELFDRIVEK-----GF-YTERDA 118
Query: 433 YKVAVGVAEALDYLHNSCEQPVIHKDVKSSNIL---LSDDFEPQLSDFGLASWLSTSSSH 489
++ V +A+ YLH+ ++H+D+K N+L L +D + +SDFGL+ S
Sbjct: 119 SRLIFQVLDAVKYLHD---LGIVHRDLKPENLLYYSLDEDSKIMISDFGLSKMEDPGS-- 173
Query: 490 LTCTDVAGTFGYLAPEYFMHGKVSEKIDVYAFGIVLLELLSGKKPINSEN 539
+ GT GY+APE S+ +D ++ G++ LL G P EN
Sbjct: 174 -VLSTACGTPGYVAPEVLAQKPYSKAVDCWSIGVIAYILLCGYPPFYDEN 222
>pdb|4HVD|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((s)-1,2,2-trimethyl-propyl)-amide
pdb|4HVG|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((s)-2-hydroxy-1,2-dimethyl-propyl)- Amide
pdb|4HVH|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((r)-2-hydroxy-1,2-dimethyl-propyl
pdb|4HVI|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((r)-1-methyl-2-oxo-2-piperidin-1-yl- Ethyl)-amide
Length = 314
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 51/181 (28%), Positives = 91/181 (50%), Gaps = 12/181 (6%)
Query: 355 GKELAVKILKPS-EDVLKEFASEIEIITALHHRNIISLFGFCFED--NNLLLVYDFLSRG 411
G +AVK L+ S D ++F EI+I+ ALH I+ G + +L LV ++L G
Sbjct: 39 GALVAVKQLQHSGPDQQRDFQREIQILKALHSDFIVKYRGVSYGPGRQSLRLVMEYLPSG 98
Query: 412 SLEENLHGNKKDGNAFGWTERYKVAVGVAEALDYLHNSCEQPVIHKDVKSSNILLSDDFE 471
L + L ++ +A + + + + ++YL + + +H+D+ + NIL+ +
Sbjct: 99 CLRDFLQRHRARLDA---SRLLLYSSQICKGMEYLGS---RRCVHRDLAARNILVESEAH 152
Query: 472 PQLSDFGLASWLSTSSSHLTCTDVAGT--FGYLAPEYFMHGKVSEKIDVYAFGIVLLELL 529
+++DFGLA L + + + F Y APE S + DV++FG+VL EL
Sbjct: 153 VKIADFGLAKLLPLDKDYYVVREPGQSPIFWY-APESLSDNIFSRQSDVWSFGVVLYELF 211
Query: 530 S 530
+
Sbjct: 212 T 212
>pdb|4FG7|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-293 In Complex With Atp
Length = 293
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 49/170 (28%), Positives = 83/170 (48%), Gaps = 17/170 (10%)
Query: 375 SEIEIITALHHRNIISLFGFCFEDNNLLLVYDFLSRGSLEENLHGNKKDGNAFGWTER-- 432
+EI ++ + H NI++L +L L+ +S G L + + F +TER
Sbjct: 65 NEIAVLHKIKHPNIVALDDIYESGGHLYLIMQLVSGGELFDRIVEK-----GF-YTERDA 118
Query: 433 YKVAVGVAEALDYLHNSCEQPVIHKDVKSSNIL---LSDDFEPQLSDFGLASWLSTSSSH 489
++ V +A+ YLH+ ++H+D+K N+L L +D + +SDFGL+ S
Sbjct: 119 SRLIFQVLDAVKYLHD---LGIVHRDLKPENLLYYSLDEDSKIMISDFGLSKMEDPGS-- 173
Query: 490 LTCTDVAGTFGYLAPEYFMHGKVSEKIDVYAFGIVLLELLSGKKPINSEN 539
+ GT GY+APE S+ +D ++ G++ LL G P EN
Sbjct: 174 -VLSTACGTPGYVAPEVLAQKPYSKAVDCWSIGVIAYILLCGYPPFYDEN 222
>pdb|4FG8|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-315 In Complex With Atp
pdb|4FG8|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-315 In Complex With Atp
Length = 315
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 49/170 (28%), Positives = 83/170 (48%), Gaps = 17/170 (10%)
Query: 375 SEIEIITALHHRNIISLFGFCFEDNNLLLVYDFLSRGSLEENLHGNKKDGNAFGWTER-- 432
+EI ++ + H NI++L +L L+ +S G L + + F +TER
Sbjct: 65 NEIAVLHKIKHPNIVALDDIYESGGHLYLIMQLVSGGELFDRIVEK-----GF-YTERDA 118
Query: 433 YKVAVGVAEALDYLHNSCEQPVIHKDVKSSNIL---LSDDFEPQLSDFGLASWLSTSSSH 489
++ V +A+ YLH+ ++H+D+K N+L L +D + +SDFGL+ S
Sbjct: 119 SRLIFQVLDAVKYLHD---LGIVHRDLKPENLLYYSLDEDSKIMISDFGLSKMEDPGS-- 173
Query: 490 LTCTDVAGTFGYLAPEYFMHGKVSEKIDVYAFGIVLLELLSGKKPINSEN 539
+ GT GY+APE S+ +D ++ G++ LL G P EN
Sbjct: 174 -VLSTACGTPGYVAPEVLAQKPYSKAVDCWSIGVIAYILLCGYPPFYDEN 222
>pdb|2YJS|A Chain A, Structure Of C1156y Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 55/216 (25%), Positives = 96/216 (44%), Gaps = 18/216 (8%)
Query: 339 VGKGGHSHVYRGCL------PDGKELAVKILKP--SEDVLKEFASEIEIITALHHRNIIS 390
+G G VY G + P ++AVK L SE +F E II+ +H+NI+
Sbjct: 53 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVYSEQDELDFLMEALIISKFNHQNIVR 112
Query: 391 LFGFCFEDNNLLLVYDFLSRGSLEENLHGNKK---DGNAFGWTERYKVAVGVAEALDYLH 447
G + ++ + ++ G L+ L + ++ + VA +A YL
Sbjct: 113 CIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLE 172
Query: 448 NSCEQPVIHKDVKSSNILLS---DDFEPQLSDFGLASWLSTSSSHLTCTDVAGTFGYLAP 504
E IH+D+ + N LL+ ++ DFG+A + +S + ++ P
Sbjct: 173 ---ENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVKWMPP 229
Query: 505 EYFMHGKVSEKIDVYAFGIVLLELLS-GKKPINSEN 539
E FM G + K D ++FG++L E+ S G P S++
Sbjct: 230 EAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKS 265
>pdb|3PJC|A Chain A, Crystal Structure Of Jak3 Complexed With A Potent Atp Site
Inhibitor Showing High Selectivity Within The Janus
Kinase Family
Length = 315
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 51/181 (28%), Positives = 91/181 (50%), Gaps = 12/181 (6%)
Query: 355 GKELAVKILKPS-EDVLKEFASEIEIITALHHRNIISLFGFCFED--NNLLLVYDFLSRG 411
G +AVK L+ S D ++F EI+I+ ALH I+ G + +L LV ++L G
Sbjct: 40 GALVAVKQLQHSGPDQQRDFQREIQILKALHSDFIVKYRGVSYGPGRQSLRLVMEYLPSG 99
Query: 412 SLEENLHGNKKDGNAFGWTERYKVAVGVAEALDYLHNSCEQPVIHKDVKSSNILLSDDFE 471
L + L ++ +A + + + + ++YL + + +H+D+ + NIL+ +
Sbjct: 100 CLRDFLQRHRARLDA---SRLLLYSSQICKGMEYLGS---RRCVHRDLAARNILVESEAH 153
Query: 472 PQLSDFGLASWLSTSSSHLTCTDVAGT--FGYLAPEYFMHGKVSEKIDVYAFGIVLLELL 529
+++DFGLA L + + + F Y APE S + DV++FG+VL EL
Sbjct: 154 VKIADFGLAKLLPLDKDYYVVREPGQSPIFWY-APESLSDNIFSRQSDVWSFGVVLYELF 212
Query: 530 S 530
+
Sbjct: 213 T 213
>pdb|3PP0|A Chain A, Crystal Structure Of The Kinase Domain Of Human Her2
(Erbb2).
pdb|3PP0|B Chain B, Crystal Structure Of The Kinase Domain Of Human Her2
(Erbb2).
pdb|3RCD|A Chain A, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|B Chain B, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|C Chain C, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|D Chain D, Her2 Kinase Domain Complexed With Tak-285
Length = 338
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 47/208 (22%), Positives = 98/208 (47%), Gaps = 15/208 (7%)
Query: 338 LVGKGGHSHVYRGC-LPDGKEL----AVKILK--PSEDVLKEFASEIEIITALHHRNIIS 390
++G G VY+G +PDG+ + A+K+L+ S KE E ++ + +
Sbjct: 24 VLGSGAFGTVYKGIWIPDGENVKIPVAIKVLRENTSPKANKEILDEAYVMAGVGSPYVSR 83
Query: 391 LFGFCFEDNNLLLVYDFLSRGSLEENLHGNKKDGNAFGWTERYKVAVGVAEALDYLHNSC 450
L G C + + LV + G L +++ N+ G + + +A+ + YL +
Sbjct: 84 LLGICLT-STVQLVTQLMPYGCLLDHVRENR---GRLGSQDLLNWCMQIAKGMSYLEDV- 138
Query: 451 EQPVIHKDVKSSNILLSDDFEPQLSDFGLASWLSTSSSHLTCTDVAGTFGYLAPEYFMHG 510
++H+D+ + N+L+ +++DFGLA L + ++A E +
Sbjct: 139 --RLVHRDLAARNVLVKSPNHVKITDFGLARLLDIDETEYHADGGKVPIKWMALESILRR 196
Query: 511 KVSEKIDVYAFGIVLLELLS-GKKPINS 537
+ + + DV+++G+ + EL++ G KP +
Sbjct: 197 RFTHQSDVWSYGVTVWELMTFGAKPYDG 224
>pdb|2WQB|A Chain A, Structure Of The Tie2 Kinase Domain In Complex With A
Thiazolopyrimidine Inhibitor
Length = 324
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 52/211 (24%), Positives = 103/211 (48%), Gaps = 24/211 (11%)
Query: 338 LVGKGGHSHVYRGCLP-DGKEL--AVKILK--PSEDVLKEFASEIEIITAL-HHRNIISL 391
++G+G V + + DG + A+K +K S+D ++FA E+E++ L HH NII+L
Sbjct: 29 VIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNIINL 88
Query: 392 FGFCFEDNNLLLVYDFLSRGSLEENLHGNK------------KDGNAFGWTERYKVAVGV 439
G C L L ++ G+L + L ++ + + A V
Sbjct: 89 LGACEHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADV 148
Query: 440 AEALDYLHNSCEQPVIHKDVKSSNILLSDDFEPQLSDFGLASWLSTSSSHLTCTDVAGTF 499
A +DYL ++ IH+++ + NIL+ +++ +++DFGL+ ++ T
Sbjct: 149 ARGMDYL---SQKQFIHRNLAARNILVGENYVAKIADFGLS---RGQEVYVKKTMGRLPV 202
Query: 500 GYLAPEYFMHGKVSEKIDVYAFGIVLLELLS 530
++A E + + DV+++G++L E++S
Sbjct: 203 RWMAIESLNYSVYTTNSDVWSYGVLLWEIVS 233
>pdb|2ZV2|A Chain A, Crystal Structure Of Human CalciumCALMODULIN-Dependent
Protein Kinase Kinase 2, Beta, Camkk2 Kinase Domain In
Complex With Sto-609
Length = 298
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 47/176 (26%), Positives = 90/176 (51%), Gaps = 19/176 (10%)
Query: 370 LKEFASEIEIITALHHRNIISLFGFCFEDN--NLLLVYDFLSRGSLEE--NLHGNKKDGN 425
+++ EI I+ L H N++ L + N +L +V++ +++G + E L +D
Sbjct: 80 IEQVYQEIAILKKLDHPNVVKLVEVLDDPNEDHLYMVFELVNQGPVMEVPTLKPLSEDQA 139
Query: 426 AFGWTERYKVAVGVAEALDYLHNSCEQPVIHKDVKSSNILLSDDFEPQLSDFGLASWLST 485
F + + K ++YLH Q +IH+D+K SN+L+ +D +++DFG+++
Sbjct: 140 RFYFQDLIK-------GIEYLHY---QKIIHRDIKPSNLLVGEDGHIKIADFGVSNEFKG 189
Query: 486 SSSHLTCTDVAGTFGYLAPEYFMHGK---VSEKIDVYAFGIVLLELLSGKKPINSE 538
S + L+ T GT ++APE + + +DV+A G+ L + G+ P E
Sbjct: 190 SDALLSNT--VGTPAFMAPESLSETRKIFSGKALDVWAMGVTLYCFVFGQCPFMDE 243
>pdb|3LXK|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
pdb|3LXL|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
Length = 327
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 51/181 (28%), Positives = 91/181 (50%), Gaps = 12/181 (6%)
Query: 355 GKELAVKILKPS-EDVLKEFASEIEIITALHHRNIISLFGFCFED--NNLLLVYDFLSRG 411
G +AVK L+ S D ++F EI+I+ ALH I+ G + +L LV ++L G
Sbjct: 52 GALVAVKQLQHSGPDQQRDFQREIQILKALHSDFIVKYRGVSYGPGRQSLRLVMEYLPSG 111
Query: 412 SLEENLHGNKKDGNAFGWTERYKVAVGVAEALDYLHNSCEQPVIHKDVKSSNILLSDDFE 471
L + L ++ +A + + + + ++YL + + +H+D+ + NIL+ +
Sbjct: 112 CLRDFLQRHRARLDA---SRLLLYSSQICKGMEYLGS---RRCVHRDLAARNILVESEAH 165
Query: 472 PQLSDFGLASWLSTSSSHLTCTDVAGT--FGYLAPEYFMHGKVSEKIDVYAFGIVLLELL 529
+++DFGLA L + + + F Y APE S + DV++FG+VL EL
Sbjct: 166 VKIADFGLAKLLPLDKDYYVVREPGQSPIFWY-APESLSDNIFSRQSDVWSFGVVLYELF 224
Query: 530 S 530
+
Sbjct: 225 T 225
>pdb|3RNY|A Chain A, Crystal Structure Of Human Rsk1 C-Terminal Kinase Domain
pdb|3RNY|B Chain B, Crystal Structure Of Human Rsk1 C-Terminal Kinase Domain
Length = 346
Score = 63.5 bits (153), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 59/204 (28%), Positives = 96/204 (47%), Gaps = 20/204 (9%)
Query: 339 VGKGGHSHVYRGCLPDGK--ELAVKILKPSEDVLKEFASEIEIITAL-HHRNIISLFGFC 395
+G G +S R C+ E AVK++ S+ ++ + EIEI+ H NII+L
Sbjct: 35 IGVGSYSECKR-CVHKATNMEYAVKVIDKSK---RDPSEEIEILLRYGQHPNIITLKDVY 90
Query: 396 FEDNNLLLVYDFLSRGSLEENLHGNKKDGNAFGWTERYKVAVGVAEALDYLHNSCEQPVI 455
+ ++ LV + + G L + + K F E V + + ++YLH+ Q V+
Sbjct: 91 DDGKHVYLVTELMRGGELLDKILRQK----FFSEREASFVLHTIGKTVEYLHS---QGVV 143
Query: 456 HKDVKSSNILLSDDF-EPQ---LSDFGLASWLSTSSSHLTCTDVAGTFGYLAPEYFMHGK 511
H+D+K SNIL D+ P+ + DFG A L + L F +APE
Sbjct: 144 HRDLKPSNILYVDESGNPECLRICDFGFAKQLRAENGLLMTPCYTANF--VAPEVLKRQG 201
Query: 512 VSEKIDVYAFGIVLLELLSGKKPI 535
E D+++ GI+L +L+G P
Sbjct: 202 YDEGCDIWSLGILLYTMLAGYTPF 225
>pdb|2WNT|A Chain A, Crystal Structure Of The Human Ribosomal Protein S6 Kinase
pdb|2WNT|B Chain B, Crystal Structure Of The Human Ribosomal Protein S6 Kinase
Length = 330
Score = 63.5 bits (153), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 60/220 (27%), Positives = 103/220 (46%), Gaps = 20/220 (9%)
Query: 323 YQELLSATSNFLPEYLVGKGGHSHVYRGCLPDGK--ELAVKILKPSEDVLKEFASEIEII 380
Y + + + ++ + +G G +S R C+ E AVK++ S+ ++ + EIEI+
Sbjct: 19 YFQSMVFSDGYVVKETIGVGSYSECKR-CVHKATNMEYAVKVIDKSK---RDPSEEIEIL 74
Query: 381 TAL-HHRNIISLFGFCFEDNNLLLVYDFLSRGSLEENLHGNKKDGNAFGWTERYKVAVGV 439
H NII+L + ++ LV + + G L + + K F E V +
Sbjct: 75 LRYGQHPNIITLKDVYDDGKHVYLVTELMRGGELLDKILRQK----FFSEREASFVLHTI 130
Query: 440 AEALDYLHNSCEQPVIHKDVKSSNILLSDDF-EPQ---LSDFGLASWLSTSSSHLTCTDV 495
+ ++YLH+ Q V+H+D+K SNIL D+ P+ + DFG A L + L
Sbjct: 131 GKTVEYLHS---QGVVHRDLKPSNILYVDESGNPECLRICDFGFAKQLRAENGLLMTPCY 187
Query: 496 AGTFGYLAPEYFMHGKVSEKIDVYAFGIVLLELLSGKKPI 535
F +APE E D+++ GI+L +L+G P
Sbjct: 188 TANF--VAPEVLKRQGYDEGCDIWSLGILLYTMLAGYTPF 225
>pdb|3LCT|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
pdb|3LCS|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
Length = 344
Score = 63.5 bits (153), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 54/216 (25%), Positives = 95/216 (43%), Gaps = 18/216 (8%)
Query: 339 VGKGGHSHVYRGCL------PDGKELAVKILKP--SEDVLKEFASEIEIITALHHRNIIS 390
+G G VY G + P ++AVK L SE +F E II+ +H+NI+
Sbjct: 56 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVR 115
Query: 391 LFGFCFEDNNLLLVYDFLSRGSLEENLHGNKK---DGNAFGWTERYKVAVGVAEALDYLH 447
G + ++ + ++ G L+ L + ++ + VA +A YL
Sbjct: 116 CIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLE 175
Query: 448 NSCEQPVIHKDVKSSNILLS---DDFEPQLSDFGLASWLSTSSSHLTCTDVAGTFGYLAP 504
E IH+D+ + N LL+ ++ DFG+A + + + ++ P
Sbjct: 176 ---ENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRAGYYRKGGCAMLPVKWMPP 232
Query: 505 EYFMHGKVSEKIDVYAFGIVLLELLS-GKKPINSEN 539
E FM G + K D ++FG++L E+ S G P S++
Sbjct: 233 EAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKS 268
>pdb|3L9P|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
Length = 367
Score = 63.5 bits (153), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 54/216 (25%), Positives = 95/216 (43%), Gaps = 18/216 (8%)
Query: 339 VGKGGHSHVYRGCL------PDGKELAVKILKP--SEDVLKEFASEIEIITALHHRNIIS 390
+G G VY G + P ++AVK L SE +F E II+ +H+NI+
Sbjct: 79 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVR 138
Query: 391 LFGFCFEDNNLLLVYDFLSRGSLEENLHGNKK---DGNAFGWTERYKVAVGVAEALDYLH 447
G + ++ + ++ G L+ L + ++ + VA +A YL
Sbjct: 139 CIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLE 198
Query: 448 NSCEQPVIHKDVKSSNILLS---DDFEPQLSDFGLASWLSTSSSHLTCTDVAGTFGYLAP 504
E IH+D+ + N LL+ ++ DFG+A + + + ++ P
Sbjct: 199 ---ENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRAGYYRKGGCAMLPVKWMPP 255
Query: 505 EYFMHGKVSEKIDVYAFGIVLLELLS-GKKPINSEN 539
E FM G + K D ++FG++L E+ S G P S++
Sbjct: 256 EAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKS 291
>pdb|4IC7|A Chain A, Crystal Structure Of The Erk5 Kinase Domain In Complex
With An Mkk5 Binding Fragment
pdb|4IC7|D Chain D, Crystal Structure Of The Erk5 Kinase Domain In Complex
With An Mkk5 Binding Fragment
pdb|4IC8|A Chain A, Crystal Structure Of The Apo Erk5 Kinase Domain
pdb|4IC8|B Chain B, Crystal Structure Of The Apo Erk5 Kinase Domain
Length = 442
Score = 63.5 bits (153), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 53/209 (25%), Positives = 101/209 (48%), Gaps = 26/209 (12%)
Query: 355 GKELAVKILKPSEDVL---KEFASEIEIITALHHRNIISL---------FGFCFEDNNLL 402
G+++A+K + + DV+ K E++I+ H NII++ +G E ++
Sbjct: 80 GQQVAIKKIPNAFDVVTNAKRTLRELKILKHFKHDNIIAIKDILRPTVPYG---EFKSVY 136
Query: 403 LVYDFLSRGSLEENLHGNKKDGNAFGWTERYKVAVGVAEALDYLHNSCEQPVIHKDVKSS 462
+V D + E +LH + L Y+H++ VIH+D+K S
Sbjct: 137 VVLDLM-----ESDLHQIIHSSQPLTLEHVRYFLYQLLRGLKYMHSAQ---VIHRDLKPS 188
Query: 463 NILLSDDFEPQLSDFGLASWLSTSSS--HLTCTDVAGTFGYLAPEYFMH-GKVSEKIDVY 519
N+L++++ E ++ DFG+A L TS + T+ T Y APE + + ++ ID++
Sbjct: 189 NLLVNENCELKIGDFGMARGLCTSPAEHQYFMTEYVATRWYRAPELMLSLHEYTQAIDLW 248
Query: 520 AFGIVLLELLSGKKPINSENPKGQESLVM 548
+ G + E+L+ ++ +N Q L+M
Sbjct: 249 SVGCIFGEMLARRQLFPGKNYVHQLQLIM 277
>pdb|2JED|A Chain A, The Crystal Structure Of The Kinase Domain Of The Protein
Kinase C Theta In Complex With Nvp-Xaa228 At 2.32a
Resolution.
pdb|2JED|B Chain B, The Crystal Structure Of The Kinase Domain Of The Protein
Kinase C Theta In Complex With Nvp-Xaa228 At 2.32a
Resolution
Length = 352
Score = 63.5 bits (153), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 52/210 (24%), Positives = 98/210 (46%), Gaps = 19/210 (9%)
Query: 338 LVGKGGHSHVYRGCLPDGKEL-AVKILKPS-----EDVLKEFASEIEIITALHHRNIISL 391
++GKG V+ + A+K LK +DV + + A H + +
Sbjct: 25 MLGKGSFGKVFLAEFKKTNQFFAIKALKKDVVLMDDDVECTMVEKRVLSLAWEHPFLTHM 84
Query: 392 FGFCFEDNNLLLVYDFLSRGSLEENLHGNKKDGNAFGWTERYKVAVGVAEALDYLHNSCE 451
F NL V ++L+ G L ++ K F + A + L +LH+
Sbjct: 85 FCTFQTKENLFFVMEYLNGGDLMYHIQSCHK----FDLSRATFYAAEIILGLQFLHS--- 137
Query: 452 QPVIHKDVKSSNILLSDDFEPQLSDFGLA--SWLSTSSSHLTCTDVAGTFGYLAPEYFMH 509
+ ++++D+K NILL D +++DFG+ + L + ++ C GT Y+APE +
Sbjct: 138 KGIVYRDLKLDNILLDKDGHIKIADFGMCKENMLGDAKTNEFC----GTPDYIAPEILLG 193
Query: 510 GKVSEKIDVYAFGIVLLELLSGKKPINSEN 539
K + +D ++FG++L E+L G+ P + ++
Sbjct: 194 QKYNHSVDWWSFGVLLYEMLIGQSPFHGQD 223
>pdb|1YVJ|A Chain A, Crystal Structure Of The Jak3 Kinase Domain In Complex
With A Staurosporine Analogue
Length = 290
Score = 63.2 bits (152), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 51/181 (28%), Positives = 89/181 (49%), Gaps = 12/181 (6%)
Query: 355 GKELAVKILKPS-EDVLKEFASEIEIITALHHRNIISLFGFCFEDNN--LLLVYDFLSRG 411
G +AVK L+ S D ++F EI+I+ ALH I+ G + L LV ++L G
Sbjct: 36 GALVAVKQLQHSGPDQQRDFQREIQILKALHSDFIVKYRGVSYGPGRPELRLVMEYLPSG 95
Query: 412 SLEENLHGNKKDGNAFGWTERYKVAVGVAEALDYLHNSCEQPVIHKDVKSSNILLSDDFE 471
L + L ++ +A + + + + ++YL + + +H+D+ + NIL+ +
Sbjct: 96 CLRDFLQRHRARLDA---SRLLLYSSQICKGMEYLGS---RRCVHRDLAARNILVESEAH 149
Query: 472 PQLSDFGLASWLSTSSSHLTCTDVAGT--FGYLAPEYFMHGKVSEKIDVYAFGIVLLELL 529
+++DFGLA L + + F Y APE S + DV++FG+VL EL
Sbjct: 150 VKIADFGLAKLLPLDKDXXVVREPGQSPIFWY-APESLSDNIFSRQSDVWSFGVVLYELF 208
Query: 530 S 530
+
Sbjct: 209 T 209
>pdb|4B99|A Chain A, Crystal Structure Of Mapk7 (Erk5) With Inhibitor
Length = 398
Score = 63.2 bits (152), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 53/209 (25%), Positives = 101/209 (48%), Gaps = 26/209 (12%)
Query: 355 GKELAVKILKPSEDVL---KEFASEIEIITALHHRNIISL---------FGFCFEDNNLL 402
G+++A+K + + DV+ K E++I+ H NII++ +G E ++
Sbjct: 79 GQQVAIKKIPNAFDVVTNAKRTLRELKILKHFKHDNIIAIKDILRPTVPYG---EFKSVY 135
Query: 403 LVYDFLSRGSLEENLHGNKKDGNAFGWTERYKVAVGVAEALDYLHNSCEQPVIHKDVKSS 462
+V D + E +LH + L Y+H++ VIH+D+K S
Sbjct: 136 VVLDLM-----ESDLHQIIHSSQPLTLEHVRYFLYQLLRGLKYMHSAQ---VIHRDLKPS 187
Query: 463 NILLSDDFEPQLSDFGLASWLSTSSS--HLTCTDVAGTFGYLAPEYFMH-GKVSEKIDVY 519
N+L++++ E ++ DFG+A L TS + T+ T Y APE + + ++ ID++
Sbjct: 188 NLLVNENCELKIGDFGMARGLCTSPAEHQYFMTEYVATRWYRAPELMLSLHEYTQAIDLW 247
Query: 520 AFGIVLLELLSGKKPINSENPKGQESLVM 548
+ G + E+L+ ++ +N Q L+M
Sbjct: 248 SVGCIFGEMLARRQLFPGKNYVHQLQLIM 276
>pdb|3IW4|A Chain A, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
pdb|3IW4|B Chain B, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
pdb|3IW4|C Chain C, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
Length = 360
Score = 63.2 bits (152), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 54/216 (25%), Positives = 106/216 (49%), Gaps = 21/216 (9%)
Query: 332 NFLPEYLVGKGGHSHVYRGCLPDGKEL-AVKILKP----SEDVLKEFASEIEIITALHHR 386
NFL ++GKG V +EL A+KILK +D ++ E ++ L
Sbjct: 22 NFL--MVLGKGSFGKVMLADRKGTEELYAIKILKKDVVIQDDDVECTMVEKRVLALLDKP 79
Query: 387 NIISLFGFCFED-NNLLLVYDFLSRGSLEENLH--GNKKDGNAFGWTERYKVAVGVAEAL 443
++ CF+ + L V ++++ G L ++ G K+ A + A ++ L
Sbjct: 80 PFLTQLHSCFQTVDRLYFVMEYVNGGDLMYHIQQVGKFKEPQAVFY------AAEISIGL 133
Query: 444 DYLHNSCEQPVIHKDVKSSNILLSDDFEPQLSDFGLASWLSTSSSHLTCTDVAGTFGYLA 503
+LH ++ +I++D+K N++L + +++DFG+ +T + GT Y+A
Sbjct: 134 FFLH---KRGIIYRDLKLDNVMLDSEGHIKIADFGMCK--EHMMDGVTTREFCGTPDYIA 188
Query: 504 PEYFMHGKVSEKIDVYAFGIVLLELLSGKKPINSEN 539
PE + + +D +A+G++L E+L+G+ P + E+
Sbjct: 189 PEIIAYQPYGKSVDWWAYGVLLYEMLAGQPPFDGED 224
>pdb|3CJG|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
3,4,5-Trimethoxy Aniline Containing Pyrimidine
Length = 309
Score = 63.2 bits (152), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 52/195 (26%), Positives = 97/195 (49%), Gaps = 22/195 (11%)
Query: 356 KELAVKILK--PSEDVLKEFASEIEIITAL-HHRNIISLFGFCFEDNN-LLLVYDFLSRG 411
+ +AVK+LK + + SE++I+ + HH N+++L G C + L+++ +F G
Sbjct: 58 RTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFG 117
Query: 412 SLEENLHGNKKDGNAF-GWTERYK----------VAVGVAEALDYLHNSCEQPVIHKDVK 460
+L L + N F + + YK + VA+ +++L + IH+D+
Sbjct: 118 NLSTYLRSKR---NEFVPYKDLYKDFLTLEHLICYSFQVAKGMEFL---ASRKXIHRDLA 171
Query: 461 SSNILLSDDFEPQLSDFGLASWLSTSSSHLTCTDVAGTFGYLAPEYFMHGKVSEKIDVYA 520
+ NILLS+ ++ DFGLA + ++ D ++APE + + DV++
Sbjct: 172 ARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWS 231
Query: 521 FGIVLLELLS-GKKP 534
FG++L E+ S G P
Sbjct: 232 FGVLLWEIFSLGASP 246
>pdb|3OZ6|A Chain A, Crystal Structure Of Mapk From Cryptosporidium Parvum,
Cgd2_1960
pdb|3OZ6|B Chain B, Crystal Structure Of Mapk From Cryptosporidium Parvum,
Cgd2_1960
Length = 388
Score = 63.2 bits (152), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 66/225 (29%), Positives = 113/225 (50%), Gaps = 39/225 (17%)
Query: 339 VGKGGHSHVYRGC-LPDGKELAVK----ILKPSEDVLKEFASEIEIITALH-HRNIISLF 392
+GKG + V++ G+ +AVK + S D + F EI I+T L H NI++L
Sbjct: 17 LGKGAYGIVWKSIDRRTGEVVAVKKIFDAFQNSTDAQRTF-REIMILTELSGHENIVNLL 75
Query: 393 GFCFEDNN--LLLVYDFLSRGSLEENLHGNKKDGNAFGWTERYKVAVGVAEALDYLHNSC 450
DN+ + LV+D++ E +LH + N + V + + + YLH+
Sbjct: 76 NVLRADNDRDVYLVFDYM-----ETDLHAVIR-ANILEPVHKQYVVYQLIKVIKYLHSGG 129
Query: 451 EQPVIHKDVKSSNILLSDDFEPQLSDFGLA-SWLS----TSSSHLTC------------- 492
++H+D+K SNILL+ + +++DFGL+ S+++ T++ L+
Sbjct: 130 ---LLHRDMKPSNILLNAECHVKVADFGLSRSFVNIRRVTNNIPLSINENTENFDDDQPI 186
Query: 493 -TDVAGTFGYLAPEYFMHG-KVSEKIDVYAFGIVLLELLSGKKPI 535
TD T Y APE + K ++ ID+++ G +L E+L G KPI
Sbjct: 187 LTDYVATRWYRAPEILLGSTKYTKGIDMWSLGCILGEILCG-KPI 230
>pdb|3CJF|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
3,4,5-Trimethoxy Aniline Containing Pyrimidine
Length = 309
Score = 63.2 bits (152), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 50/190 (26%), Positives = 95/190 (50%), Gaps = 21/190 (11%)
Query: 356 KELAVKILK--PSEDVLKEFASEIEIITAL-HHRNIISLFGFCFEDNN-LLLVYDFLSRG 411
+ +AVK+LK + + SE++I+ + HH N+++L G C + L+++ +F G
Sbjct: 58 RTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFG 117
Query: 412 SLEENLHGNKKDGNAF-GWTERYK----------VAVGVAEALDYLHNSCEQPVIHKDVK 460
+L L + N F + + YK + VA+ +++L + IH+D+
Sbjct: 118 NLSTYLRSKR---NEFVPYKDLYKDFLTLEHLIXYSFQVAKGMEFL---ASRKXIHRDLA 171
Query: 461 SSNILLSDDFEPQLSDFGLASWLSTSSSHLTCTDVAGTFGYLAPEYFMHGKVSEKIDVYA 520
+ NILLS+ ++ DFGLA + ++ D ++APE + + DV++
Sbjct: 172 ARNILLSEKNVVKIXDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWS 231
Query: 521 FGIVLLELLS 530
FG++L E+ S
Sbjct: 232 FGVLLWEIFS 241
>pdb|4AGU|A Chain A, Crystal Structure Of The Human Cdkl1 Kinase Domain
pdb|4AGU|B Chain B, Crystal Structure Of The Human Cdkl1 Kinase Domain
pdb|4AGU|C Chain C, Crystal Structure Of The Human Cdkl1 Kinase Domain
Length = 311
Score = 63.2 bits (152), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 60/201 (29%), Positives = 96/201 (47%), Gaps = 20/201 (9%)
Query: 339 VGKGGHSHVYRGCLPD-GKELAVKILKPSED--VLKEFA-SEIEIITALHHRNIISLFGF 394
+G+G + V++ D G+ +A+K SED V+K+ A EI ++ L H N+++L
Sbjct: 11 IGEGSYGVVFKCRNRDTGQIVAIKKFLESEDDPVIKKIALREIRMLKQLKHPNLVNLLEV 70
Query: 395 CFEDNNLLLVYDFLSRGSLEENLHGNKKDGNAFGWTERY--KVAVGVAEALDYLH-NSCE 451
L LV+++ L E D G E + +A+++ H ++C
Sbjct: 71 FRRKRRLHLVFEYCDHTVLHE------LDRYQRGVPEHLVKSITWQTLQAVNFCHKHNC- 123
Query: 452 QPVIHKDVKSSNILLSDDFEPQLSDFGLASWLSTSSSHLTCTDVAGTFGYLAPEYFM-HG 510
IH+DVK NIL++ +L DFG A L+ S + D T Y +PE +
Sbjct: 124 ---IHRDVKPENILITKHSVIKLCDFGFARLLTGPSDYY--DDEVATRWYRSPELLVGDT 178
Query: 511 KVSEKIDVYAFGIVLLELLSG 531
+ +DV+A G V ELLSG
Sbjct: 179 QYGPPVDVWAIGCVFAELLSG 199
>pdb|3TAC|A Chain A, Crystal Structure Of The Liprin-AlphaCASK COMPLEX
Length = 361
Score = 62.8 bits (151), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 62/225 (27%), Positives = 98/225 (43%), Gaps = 25/225 (11%)
Query: 338 LVGKGGHSHVYRGCL--PDGKELAVKILKPSEDVLK----------EFASEIEIITALHH 385
++GKG S V R C+ G++ AVKI+ DV K + E I L H
Sbjct: 33 VIGKGPFS-VVRRCINRETGQQFAVKIV----DVAKFTSSPGLSTEDLKREASICHMLKH 87
Query: 386 RNIISLFGFCFEDNNLLLVYDFLSRGSLEENLHGNKKDGNAFGWTERYKVAVGVAEALDY 445
+I+ L D L +V++F+ L + G + + EAL Y
Sbjct: 88 PHIVELLETYSSDGMLYMVFEFMDGADLCFEIVKRADAGFVYSEAVASHYMRQILEALRY 147
Query: 446 LHNSCEQPVIHKDVKSSNILLS--DDFEP-QLSDFGLASWLSTSSSHLTCTDVAGTFGYL 502
H++ +IH+DVK +LL+ ++ P +L FG+A L S L GT ++
Sbjct: 148 CHDN---NIIHRDVKPHCVLLASKENSAPVKLGGFGVAIQLGESG--LVAGGRVGTPHFM 202
Query: 503 APEYFMHGKVSEKIDVYAFGIVLLELLSGKKPINSENPKGQESLV 547
APE + +DV+ G++L LLSG P + E ++
Sbjct: 203 APEVVKREPYGKPVDVWGCGVILFILLSGCLPFYGTKERLFEGII 247
>pdb|2JC6|A Chain A, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase 1d
pdb|2JC6|C Chain C, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase 1d
Length = 334
Score = 62.8 bits (151), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 52/190 (27%), Positives = 85/190 (44%), Gaps = 15/190 (7%)
Query: 355 GKELAVKILKPSEDVLKE--FASEIEIITALHHRNIISLFGFCFEDNNLLLVYDFLSRGS 412
GK AVK + KE +EI ++ + H NI++L N+L LV +S G
Sbjct: 47 GKLFAVKCIPKKALKGKESSIENEIAVLRKIKHENIVALEDIYESPNHLYLVMQLVSGGE 106
Query: 413 LEENLHGNKKDGNAFGWTERYKVAVGVAEALDYLHNSCEQPVIHKDVKSSNILL-SDDFE 471
L + + G+ + + + LD ++ ++H+D+K N+L S D E
Sbjct: 107 LFDRIVEK-------GFYTEKDASTLIRQVLDAVYYLHRMGIVHRDLKPENLLYYSQDEE 159
Query: 472 PQL--SDFGLASWLSTSSSHLTCTDVAGTFGYLAPEYFMHGKVSEKIDVYAFGIVLLELL 529
++ SDFGL+ + GT GY+APE S+ +D ++ G++ LL
Sbjct: 160 SKIMISDFGLSKMEGKGD---VMSTACGTPGYVAPEVLAQKPYSKAVDCWSIGVIAYILL 216
Query: 530 SGKKPINSEN 539
G P EN
Sbjct: 217 CGYPPFYDEN 226
>pdb|3TUB|A Chain A, Crystal Structure Of Syk Kinase Domain With 1-(5-(6,7-
Dimethoxyquinolin-4-Yloxy)pyridin-2-Yl)-3-((1r,2s)-2-
Phenylcyclopropyl)urea
Length = 293
Score = 62.8 bits (151), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 52/184 (28%), Positives = 85/184 (46%), Gaps = 16/184 (8%)
Query: 372 EFASEIEIITALHHRNIISLFGFCFEDNNLLLVYDFLSRGSLEENLHGNK--KDGNAFGW 429
E +E ++ L + I+ + G C E + +LV + G L + L N+ KD N
Sbjct: 74 ELLAEANVMQQLDNPYIVRMIGIC-EAESWMLVMEMAELGPLNKYLQQNRHVKDKNII-- 130
Query: 430 TERYKVAVGVAEALDYLHNSCEQPVIHKDVKSSNILLSDDFEPQLSDFGLASWLSTSSSH 489
++ V+ + YL E +H+D+ + N+LL ++SDFGL+ L ++
Sbjct: 131 ----ELVHQVSMGMKYLE---ESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENY 183
Query: 490 LTC-TDVAGTFGYLAPEYFMHGKVSEKIDVYAFGIVLLELLS-GKKPINSENPKGQESLV 547
T + APE + K S K DV++FG+++ E S G+KP KG E
Sbjct: 184 YKAQTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGM--KGSEVTA 241
Query: 548 MWAK 551
M K
Sbjct: 242 MLEK 245
>pdb|3VF8|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Syk Catalytic
Domain With Pyrazolylbenzimidazole Inhibitor 416
pdb|3VF9|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Syk Catalytic
Domain With Thienopyrazolylindole Inhibitor 027
pdb|3TUC|A Chain A, Crystal Structure Of Syk Kinase Domain With
1-Benzyl-N-(5-(6,7-
Dimethoxyquinolin-4-Yloxy)pyridin-2-Yl)-2-Oxo-1,
2-Dihydropyridine-3- Carboxamide
pdb|3TUD|A Chain A, Crystal Structure Of Syk Kinase Domain With
N-(4-Methyl-3-(8-Methyl-7-
Oxo-2-(Phenylamino)-7,8-Dihydropyrido[2,
3-D]pyrimidin-6-Yl)phenyl)-3- (Trifluoromethyl)benzamide
Length = 299
Score = 62.8 bits (151), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 52/184 (28%), Positives = 85/184 (46%), Gaps = 16/184 (8%)
Query: 372 EFASEIEIITALHHRNIISLFGFCFEDNNLLLVYDFLSRGSLEENLHGNK--KDGNAFGW 429
E +E ++ L + I+ + G C E + +LV + G L + L N+ KD N
Sbjct: 74 ELLAEANVMQQLDNPYIVRMIGIC-EAESWMLVMEMAELGPLNKYLQQNRHVKDKNII-- 130
Query: 430 TERYKVAVGVAEALDYLHNSCEQPVIHKDVKSSNILLSDDFEPQLSDFGLASWLSTSSSH 489
++ V+ + YL E +H+D+ + N+LL ++SDFGL+ L ++
Sbjct: 131 ----ELVHQVSMGMKYLE---ESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENY 183
Query: 490 LTC-TDVAGTFGYLAPEYFMHGKVSEKIDVYAFGIVLLELLS-GKKPINSENPKGQESLV 547
T + APE + K S K DV++FG+++ E S G+KP KG E
Sbjct: 184 YKAQTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGM--KGSEVTA 241
Query: 548 MWAK 551
M K
Sbjct: 242 MLEK 245
>pdb|4FL2|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
Length = 636
Score = 62.8 bits (151), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 52/184 (28%), Positives = 85/184 (46%), Gaps = 16/184 (8%)
Query: 372 EFASEIEIITALHHRNIISLFGFCFEDNNLLLVYDFLSRGSLEENLHGNK--KDGNAFGW 429
E +E ++ L + I+ + G C E + +LV + G L + L N+ KD N
Sbjct: 417 ELLAEANVMQQLDNPYIVRMIGIC-EAESWMLVMEMAELGPLNKYLQQNRHVKDKNII-- 473
Query: 430 TERYKVAVGVAEALDYLHNSCEQPVIHKDVKSSNILLSDDFEPQLSDFGLASWLSTSSSH 489
++ V+ + YL E +H+D+ + N+LL ++SDFGL+ L ++
Sbjct: 474 ----ELVHQVSMGMKYLE---ESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENY 526
Query: 490 LTC-TDVAGTFGYLAPEYFMHGKVSEKIDVYAFGIVLLELLS-GKKPINSENPKGQESLV 547
T + APE + K S K DV++FG+++ E S G+KP KG E
Sbjct: 527 YKAQTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGM--KGSEVTA 584
Query: 548 MWAK 551
M K
Sbjct: 585 MLEK 588
>pdb|2OH4|A Chain A, Crystal Structure Of Vegfr2 With A Benzimidazole-Urea
Inhibitor
Length = 316
Score = 62.8 bits (151), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 51/195 (26%), Positives = 96/195 (49%), Gaps = 19/195 (9%)
Query: 356 KELAVKILK--PSEDVLKEFASEIEIITAL-HHRNIISLFGFCFEDNN-LLLVYDFLSRG 411
+ +AVK+LK + + SE++I+ + HH N+++L G C + L+++ +F G
Sbjct: 59 RTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFG 118
Query: 412 SLEENLHGNKKDGNAFGWTER-YK----------VAVGVAEALDYLHNSCEQPVIHKDVK 460
+L L + + + E YK + VA+ +++L + + IH+D+
Sbjct: 119 NLSTYLRSKRNEFVPYKTPEDLYKDFLTLEHLICYSFQVAKGMEFLAS---RKCIHRDLA 175
Query: 461 SSNILLSDDFEPQLSDFGLASWLSTSSSHLTCTDVAGTFGYLAPEYFMHGKVSEKIDVYA 520
+ NILLS+ ++ DFGLA + + D ++APE + + DV++
Sbjct: 176 ARNILLSEKNVVKICDFGLARDIXKDPDXVRKGDARLPLKWMAPETIFDRVYTIQSDVWS 235
Query: 521 FGIVLLELLS-GKKP 534
FG++L E+ S G P
Sbjct: 236 FGVLLWEIFSLGASP 250
>pdb|3C0G|A Chain A, Cask Cam-kinase Domain- 3'-amp Complex, P1 Form
pdb|3C0G|B Chain B, Cask Cam-kinase Domain- 3'-amp Complex, P1 Form
pdb|3C0H|A Chain A, Cask Cam-Kinase Domain- Amppnp Complex, P1 Form
pdb|3C0H|B Chain B, Cask Cam-Kinase Domain- Amppnp Complex, P1 Form
pdb|3C0I|A Chain A, Cask Cam-Kinase Domain- 3'-Amp Complex, P212121 Form
Length = 351
Score = 62.8 bits (151), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 62/225 (27%), Positives = 98/225 (43%), Gaps = 25/225 (11%)
Query: 338 LVGKGGHSHVYRGCL--PDGKELAVKILKPSEDVLK----------EFASEIEIITALHH 385
++GKG S V R C+ G++ AVKI+ DV K + E I L H
Sbjct: 31 VIGKGPFS-VVRRCINRETGQQFAVKIV----DVAKFTSSPGLSTEDLKREASICHMLKH 85
Query: 386 RNIISLFGFCFEDNNLLLVYDFLSRGSLEENLHGNKKDGNAFGWTERYKVAVGVAEALDY 445
+I+ L D L +V++F+ L + G + + EAL Y
Sbjct: 86 PHIVELLETYSSDGMLYMVFEFMDGADLCFEIVKRADAGFVYSEAVASHYMRQILEALRY 145
Query: 446 LHNSCEQPVIHKDVKSSNILLS--DDFEP-QLSDFGLASWLSTSSSHLTCTDVAGTFGYL 502
H++ +IH+DVK +LL+ ++ P +L FG+A L S L GT ++
Sbjct: 146 CHDN---NIIHRDVKPHCVLLASKENSAPVKLGGFGVAIQLGESG--LVAGGRVGTPHFM 200
Query: 503 APEYFMHGKVSEKIDVYAFGIVLLELLSGKKPINSENPKGQESLV 547
APE + +DV+ G++L LLSG P + E ++
Sbjct: 201 APEVVKREPYGKPVDVWGCGVILFILLSGCLPFYGTKERLFEGII 245
>pdb|2RFD|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFD|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|C Chain C, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|D Chain D, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
Length = 324
Score = 62.4 bits (150), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 48/208 (23%), Positives = 101/208 (48%), Gaps = 15/208 (7%)
Query: 338 LVGKGGHSHVYRGC-LPDGKEL----AVKILK--PSEDVLKEFASEIEIITALHHRNIIS 390
++G G VY+G +P+G+++ A+K L+ S KE E ++ ++ + ++
Sbjct: 19 VLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCR 78
Query: 391 LFGFCFEDNNLLLVYDFLSRGSLEENLHGNKKDGNAFGWTERYKVAVGVAEALDYLHNSC 450
L G C + + L+ + G L + + +K + G V +AE ++YL +
Sbjct: 79 LLGICL-TSTVQLITQLMPFGCLLDYVREHKDN---IGSQYLLNWCVQIAEGMNYLED-- 132
Query: 451 EQPVIHKDVKSSNILLSDDFEPQLSDFGLASWLSTSSSHLTCTDVAGTFGYLAPEYFMHG 510
+ ++H+D+ + N+L+ +++DFGLA L ++A E +H
Sbjct: 133 -RRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHR 191
Query: 511 KVSEKIDVYAFGIVLLELLS-GKKPINS 537
+ + DV+++G+ + EL++ G KP +
Sbjct: 192 IYTHQSDVWSYGVTVWELMTFGSKPYDG 219
>pdb|4FL3|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
Length = 635
Score = 62.4 bits (150), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 52/184 (28%), Positives = 85/184 (46%), Gaps = 16/184 (8%)
Query: 372 EFASEIEIITALHHRNIISLFGFCFEDNNLLLVYDFLSRGSLEENLHGNK--KDGNAFGW 429
E +E ++ L + I+ + G C E + +LV + G L + L N+ KD N
Sbjct: 416 ELLAEANVMQQLDNPYIVRMIGIC-EAESWMLVMEMAELGPLNKYLQQNRHVKDKNII-- 472
Query: 430 TERYKVAVGVAEALDYLHNSCEQPVIHKDVKSSNILLSDDFEPQLSDFGLASWLSTSSSH 489
++ V+ + YL E +H+D+ + N+LL ++SDFGL+ L ++
Sbjct: 473 ----ELVHQVSMGMKYLE---ESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENY 525
Query: 490 LTC-TDVAGTFGYLAPEYFMHGKVSEKIDVYAFGIVLLELLS-GKKPINSENPKGQESLV 547
T + APE + K S K DV++FG+++ E S G+KP KG E
Sbjct: 526 YKAQTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGM--KGSEVTA 583
Query: 548 MWAK 551
M K
Sbjct: 584 MLEK 587
>pdb|3EMG|A Chain A, Discovery And Sar Of Novel 4-Thiazolyl-2-
Phenylaminopyrimidines As Potent Inhibitors Of Spleen
Tyrosine Kinase (Syk)
Length = 291
Score = 62.4 bits (150), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 52/184 (28%), Positives = 85/184 (46%), Gaps = 16/184 (8%)
Query: 372 EFASEIEIITALHHRNIISLFGFCFEDNNLLLVYDFLSRGSLEENLHGNK--KDGNAFGW 429
E +E ++ L + I+ + G C E + +LV + G L + L N+ KD N
Sbjct: 72 ELLAEANVMQQLDNPYIVRMIGIC-EAESWMLVMEMAELGPLNKYLQQNRHVKDKNII-- 128
Query: 430 TERYKVAVGVAEALDYLHNSCEQPVIHKDVKSSNILLSDDFEPQLSDFGLASWLSTSSSH 489
++ V+ + YL E +H+D+ + N+LL ++SDFGL+ L ++
Sbjct: 129 ----ELVHQVSMGMKYLE---ESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENY 181
Query: 490 LTC-TDVAGTFGYLAPEYFMHGKVSEKIDVYAFGIVLLELLS-GKKPINSENPKGQESLV 547
T + APE + K S K DV++FG+++ E S G+KP KG E
Sbjct: 182 YKAQTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGM--KGSEVTA 239
Query: 548 MWAK 551
M K
Sbjct: 240 MLEK 243
>pdb|1XBA|A Chain A, Crystal Structure Of Apo Syk Tyrosine Kinase Domain
pdb|1XBB|A Chain A, Crystal Structure Of The Syk Tyrosine Kinase Domain With
Gleevec
pdb|1XBC|A Chain A, Crystal Structure Of The Syk Tyrosine Kinase Domain With
Staurosporin
pdb|3FQE|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
Ym193306
pdb|3FQH|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A 2-Substituted 7-Azaindole
pdb|3FQH|B Chain B, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A 2-Substituted 7-Azaindole
pdb|3FQS|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
R406
pdb|4FL1|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
pdb|4FYN|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
3-(8-{4-
[ethyl-(2-hydroxy-ethyl)-amino]-phenylamino}-imidazo[1,
2-a]pyrazin-5- Yl)-phenol
pdb|4FYO|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
N-{(s)-1-
[7-(3,4-dimethoxy-phenylamino)-thiazolo[5,
4-d]pyrimidin-5-yl]- Pyrrolidin-3-yl}-terephthalamic
Acid
pdb|4FZ6|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
[6-((s)-2-
Methyl-pyrrolidin-1-yl)-pyridin-2-yl]-(6-phenyl-
imidazo[1,2- B]pyridazin-8-yl)-amine
Length = 291
Score = 62.4 bits (150), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 52/184 (28%), Positives = 85/184 (46%), Gaps = 16/184 (8%)
Query: 372 EFASEIEIITALHHRNIISLFGFCFEDNNLLLVYDFLSRGSLEENLHGNK--KDGNAFGW 429
E +E ++ L + I+ + G C E + +LV + G L + L N+ KD N
Sbjct: 64 ELLAEANVMQQLDNPYIVRMIGIC-EAESWMLVMEMAELGPLNKYLQQNRHVKDKNII-- 120
Query: 430 TERYKVAVGVAEALDYLHNSCEQPVIHKDVKSSNILLSDDFEPQLSDFGLASWLSTSSSH 489
++ V+ + YL E +H+D+ + N+LL ++SDFGL+ L ++
Sbjct: 121 ----ELVHQVSMGMKYLE---ESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENY 173
Query: 490 LTC-TDVAGTFGYLAPEYFMHGKVSEKIDVYAFGIVLLELLS-GKKPINSENPKGQESLV 547
T + APE + K S K DV++FG+++ E S G+KP KG E
Sbjct: 174 YKAQTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRG--MKGSEVTA 231
Query: 548 MWAK 551
M K
Sbjct: 232 MLEK 235
>pdb|3FHI|A Chain A, Crystal Structure Of A Complex Between The Catalytic And
Regulatory (Ri{alpha}) Subunits Of Pka
Length = 350
Score = 62.4 bits (150), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 53/191 (27%), Positives = 98/191 (51%), Gaps = 18/191 (9%)
Query: 355 GKELAVKILKPSEDV-LKEFA---SEIEIITALHHRNIISLFGFCFEDN-NLLLVYDFLS 409
G A+KIL + V LK+ +E I+ A++ ++ L F F+DN NL +V ++++
Sbjct: 66 GNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKL-EFSFKDNSNLYMVMEYVA 124
Query: 410 RGSLEENLHGNKKDGNAFGWTERYKVAVGVAEALDYLHNSCEQPVIHKDVKSSNILLSDD 469
G + +L ++ G R+ A + +YLH+ +I++D+K N+L+
Sbjct: 125 GGEMFSHL---RRIGRFSEPHARF-YAAQIVLTFEYLHSL---DLIYRDLKPENLLIDQQ 177
Query: 470 FEPQLSDFGLASWLSTSSSHLTCTDVAGTFGYLAPEYFMHGKVSEKIDVYAFGIVLLELL 529
Q++DFG A + + L AGT YLAPE + ++ +D +A G+++ E+
Sbjct: 178 GYIQVTDFGFAKRVKGRTWXL-----AGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMA 232
Query: 530 SGKKPINSENP 540
+G P ++ P
Sbjct: 233 AGYPPFFADQP 243
>pdb|3SRV|B Chain B, Crystal Structure Of Spleen Tyrosine Kinase (Syk) In
Complex With A Diaminopyrimidine Carboxamide Inhibitor
Length = 277
Score = 62.4 bits (150), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 52/184 (28%), Positives = 85/184 (46%), Gaps = 16/184 (8%)
Query: 372 EFASEIEIITALHHRNIISLFGFCFEDNNLLLVYDFLSRGSLEENLHGNK--KDGNAFGW 429
E +E ++ L + I+ + G C E + +LV + G L + L N+ KD N
Sbjct: 58 ELLAEANVMQQLDNPYIVRMIGIC-EAESWMLVMEMAELGPLNKYLQQNRHVKDKNII-- 114
Query: 430 TERYKVAVGVAEALDYLHNSCEQPVIHKDVKSSNILLSDDFEPQLSDFGLASWLSTSSSH 489
++ V+ + YL E +H+D+ + N+LL ++SDFGL+ L ++
Sbjct: 115 ----ELVHQVSMGMKYLE---ESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENY 167
Query: 490 LTC-TDVAGTFGYLAPEYFMHGKVSEKIDVYAFGIVLLELLS-GKKPINSENPKGQESLV 547
T + APE + K S K DV++FG+++ E S G+KP KG E
Sbjct: 168 YKAQTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGM--KGSEVTA 225
Query: 548 MWAK 551
M K
Sbjct: 226 MLEK 229
>pdb|4F4P|A Chain A, Syk In Complex With Ligand Lasw836
Length = 273
Score = 62.4 bits (150), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 52/184 (28%), Positives = 85/184 (46%), Gaps = 16/184 (8%)
Query: 372 EFASEIEIITALHHRNIISLFGFCFEDNNLLLVYDFLSRGSLEENLHGNK--KDGNAFGW 429
E +E ++ L + I+ + G C E + +LV + G L + L N+ KD N
Sbjct: 52 ELLAEANVMQQLDNPYIVRMIGIC-EAESWMLVMEMAELGPLNKYLQQNRHVKDKNII-- 108
Query: 430 TERYKVAVGVAEALDYLHNSCEQPVIHKDVKSSNILLSDDFEPQLSDFGLASWLSTSSSH 489
++ V+ + YL E +H+D+ + N+LL ++SDFGL+ L ++
Sbjct: 109 ----ELVHQVSMGMKYLE---ESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENY 161
Query: 490 LTC-TDVAGTFGYLAPEYFMHGKVSEKIDVYAFGIVLLELLS-GKKPINSENPKGQESLV 547
T + APE + K S K DV++FG+++ E S G+KP KG E
Sbjct: 162 YKAQTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRG--MKGSEVTA 219
Query: 548 MWAK 551
M K
Sbjct: 220 MLEK 223
>pdb|4DFL|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A Sulfonamidopyrazine Piperidine Inhibitor
pdb|4DFN|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
An Adamantylpyrazine Inhibitor
Length = 274
Score = 62.4 bits (150), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 52/184 (28%), Positives = 85/184 (46%), Gaps = 16/184 (8%)
Query: 372 EFASEIEIITALHHRNIISLFGFCFEDNNLLLVYDFLSRGSLEENLHGNK--KDGNAFGW 429
E +E ++ L + I+ + G C E + +LV + G L + L N+ KD N
Sbjct: 54 ELLAEANVMQQLDNPYIVRMIGIC-EAESWMLVMEMAELGPLNKYLQQNRHVKDKNII-- 110
Query: 430 TERYKVAVGVAEALDYLHNSCEQPVIHKDVKSSNILLSDDFEPQLSDFGLASWLSTSSSH 489
++ V+ + YL E +H+D+ + N+LL ++SDFGL+ L ++
Sbjct: 111 ----ELVHQVSMGMKYLE---ESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENY 163
Query: 490 LTC-TDVAGTFGYLAPEYFMHGKVSEKIDVYAFGIVLLELLS-GKKPINSENPKGQESLV 547
T + APE + K S K DV++FG+++ E S G+KP KG E
Sbjct: 164 YKAQTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRG--MKGSEVTA 221
Query: 548 MWAK 551
M K
Sbjct: 222 MLEK 225
>pdb|3VN9|A Chain A, Rifined Crystal Structure Of Non-Phosphorylated Map2k6 In
A Putative Auto-Inhibition State
Length = 340
Score = 62.0 bits (149), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 62/264 (23%), Positives = 118/264 (44%), Gaps = 25/264 (9%)
Query: 315 SSTCRLFSYQELLSATSNFLPEYLVGKGGHSHVYR-GCLPDGKELAVKILKPSEDVL--K 371
S C Q + P +G+G + V + +P G+ +AVK ++ + + K
Sbjct: 35 SKACISIGNQNFEVKADDLEPIMELGRGAYGVVEKMRHVPSGQIMAVKRIRATVNSQEQK 94
Query: 372 EFASEIEI-ITALHHRNIISLFGFCFEDNNLLLVYDFLSRGSLEENLHGNKKDGNAFGWT 430
+++I + + ++ +G F + ++ + + + SL++ G
Sbjct: 95 RLLMDLDISMRTVDCPFTVTFYGALFREGDVWICMELMDT-SLDKFYKQVIDKGQTIPED 153
Query: 431 ERYKVAVGVAEALDYLHNSCEQPVIHKDVKSSNILLSDDFEPQLSDFGLASWLSTSSSHL 490
K+AV + +AL++LH+ VIH+DVK SN+L++ + ++ DFG++ +L S +
Sbjct: 154 ILGKIAVSIVKALEHLHSKLS--VIHRDVKPSNVLINALGQVKMCDFGISGYLVDSVAK- 210
Query: 491 TCTDVAGTFGYLAPEY----FMHGKVSEKIDVYAFGIVLLELLSGKKPINSENPKGQESL 546
T AG Y+APE S K D+++ GI ++EL + P +S
Sbjct: 211 --TIDAGCKPYMAPERINPELNQKGYSVKSDIWSLGITMIELAILRFPYDS--------- 259
Query: 547 VMWAKPILKDGKVSQLLDPSLDTD 570
W P + +V + P L D
Sbjct: 260 --WGTPFQQLKQVVEEPSPQLPAD 281
>pdb|3KN5|A Chain A, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
In With Amp-Pnp
pdb|3KN5|B Chain B, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
In With Amp-Pnp
pdb|3KN6|A Chain A, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
pdb|3KN6|B Chain B, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
Length = 325
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 57/210 (27%), Positives = 95/210 (45%), Gaps = 24/210 (11%)
Query: 339 VGKGGHSHVYRGCL--PDGKELAVKILKPSEDVLKEFASEIEIITALH----HRNIISLF 392
+G+G S + R C+ + AVKI+ + A+ + ITAL H NI+ L
Sbjct: 19 LGEGSFS-ICRKCVHKKSNQAFAVKIISKRME-----ANTQKEITALKLCEGHPNIVKLH 72
Query: 393 GFCFEDNNLLLVYDFLSRGSLEENLHGNKKDGNAFGWTERYKVAVGVAEALDYLHNSCEQ 452
+ + LV + L+ G L E + K F TE + + A+ ++H+
Sbjct: 73 EVFHDQLHTFLVMELLNGGELFERI----KKKKHFSETEASYIMRKLVSAVSHMHDV--- 125
Query: 453 PVIHKDVKSSNILLSD---DFEPQLSDFGLASWLSTSSSHLTCTDVAGTFGYLAPEYFMH 509
V+H+D+K N+L +D + E ++ DFG A + L T Y APE
Sbjct: 126 GVVHRDLKPENLLFTDENDNLEIKIIDFGFARLKPPDNQPLKTP--CFTLHYAAPELLNQ 183
Query: 510 GKVSEKIDVYAFGIVLLELLSGKKPINSEN 539
E D+++ G++L +LSG+ P S +
Sbjct: 184 NGYDESCDLWSLGVILYTMLSGQVPFQSHD 213
>pdb|1OIT|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-dependent Kinase Inhibitors Identified Through
Structure-based Hybridisation
Length = 299
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 53/200 (26%), Positives = 98/200 (49%), Gaps = 15/200 (7%)
Query: 339 VGKGGHSHVY--RGCLPDGKELAVKILK---PSEDVLKEFASEIEIITALHHRNIISLFG 393
+G+G + VY R L G+ +A+K ++ +E V EI ++ L+H NI+ L
Sbjct: 11 IGEGTYGVVYKARNKL-TGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLD 69
Query: 394 FCFEDNNLLLVYDFLSRGSLEENLHGNKKDGNAFGWTERYKVAVGVAEALDYLHNSCEQP 453
+N L LV++FL + L++ + + G + Y + + L + H+
Sbjct: 70 VIHTENKLYLVFEFLHQ-DLKKFMDASALTGIPLPLIKSY--LFQLLQGLSFCHS---HR 123
Query: 454 VIHKDVKSSNILLSDDFEPQLSDFGLASWLSTSSSHLTCTDVAGTFGYLAPEYFMHGK-V 512
V+H+D+K N+L++ + +L+DFGLA T T T Y APE + K
Sbjct: 124 VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVR--TYTHEVVTLWYRAPEILLGCKYY 181
Query: 513 SEKIDVYAFGIVLLELLSGK 532
S +D+++ G + E+++ +
Sbjct: 182 STAVDIWSLGCIFAEMVTRR 201
>pdb|2JIU|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Complex With Aee788
pdb|2JIU|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Complex With Aee788
Length = 328
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 47/208 (22%), Positives = 101/208 (48%), Gaps = 15/208 (7%)
Query: 338 LVGKGGHSHVYRGC-LPDGKEL----AVKILK--PSEDVLKEFASEIEIITALHHRNIIS 390
++G G VY+G +P+G+++ A+K L+ S KE E ++ ++ + ++
Sbjct: 23 VLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCR 82
Query: 391 LFGFCFEDNNLLLVYDFLSRGSLEENLHGNKKDGNAFGWTERYKVAVGVAEALDYLHNSC 450
L G C + + L+ + G L + + +K + G V +A+ ++YL +
Sbjct: 83 LLGICL-TSTVQLIMQLMPFGCLLDYVREHKDN---IGSQYLLNWCVQIAKGMNYLED-- 136
Query: 451 EQPVIHKDVKSSNILLSDDFEPQLSDFGLASWLSTSSSHLTCTDVAGTFGYLAPEYFMHG 510
+ ++H+D+ + N+L+ +++DFGLA L ++A E +H
Sbjct: 137 -RRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHR 195
Query: 511 KVSEKIDVYAFGIVLLELLS-GKKPINS 537
+ + DV+++G+ + EL++ G KP +
Sbjct: 196 IYTHQSDVWSYGVTVWELMTFGSKPYDG 223
>pdb|3NYN|A Chain A, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Sangivamycin
pdb|3NYN|B Chain B, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Sangivamycin
pdb|3NYO|A Chain A, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Amp
pdb|3NYO|B Chain B, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Amp
Length = 576
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 45/168 (26%), Positives = 83/168 (49%), Gaps = 10/168 (5%)
Query: 375 SEIEIITALHHRNIISLFGFCFEDNN-LLLVYDFLSRGSLEENLHGNKKDGNAFGWTERY 433
+E +I+ ++ R ++SL + +E + L LV ++ G L+ +++ + G F
Sbjct: 233 NEKQILEKVNSRFVVSL-AYAYETKDALCLVLTLMNGGDLKFHIYHMGQAG--FPEARAV 289
Query: 434 KVAVGVAEALDYLHNSCEQPVIHKDVKSSNILLSDDFEPQLSDFGLASWLSTSSSHLTCT 493
A + L+ LH + ++++D+K NILL D ++SD GLA + T
Sbjct: 290 FYAAEICCGLEDLHR---ERIVYRDLKPENILLDDHGHIRISDLGLAVHVPEGQ---TIK 343
Query: 494 DVAGTFGYLAPEYFMHGKVSEKIDVYAFGIVLLELLSGKKPINSENPK 541
GT GY+APE + + + D +A G +L E+++G+ P K
Sbjct: 344 GRVGTVGYMAPEVVKNERYTFSPDWWALGCLLYEMIAGQSPFQQRKKK 391
>pdb|2JIV|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Compex With Hki-272
pdb|2JIV|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Compex With Hki-272
Length = 328
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 47/208 (22%), Positives = 101/208 (48%), Gaps = 15/208 (7%)
Query: 338 LVGKGGHSHVYRGC-LPDGKEL----AVKILK--PSEDVLKEFASEIEIITALHHRNIIS 390
++G G VY+G +P+G+++ A+K L+ S KE E ++ ++ + ++
Sbjct: 23 VLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCR 82
Query: 391 LFGFCFEDNNLLLVYDFLSRGSLEENLHGNKKDGNAFGWTERYKVAVGVAEALDYLHNSC 450
L G C + + L+ + G L + + +K + G V +A+ ++YL +
Sbjct: 83 LLGICL-TSTVQLIMQLMPFGXLLDYVREHKDN---IGSQYLLNWCVQIAKGMNYLED-- 136
Query: 451 EQPVIHKDVKSSNILLSDDFEPQLSDFGLASWLSTSSSHLTCTDVAGTFGYLAPEYFMHG 510
+ ++H+D+ + N+L+ +++DFGLA L ++A E +H
Sbjct: 137 -RRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHR 195
Query: 511 KVSEKIDVYAFGIVLLELLS-GKKPINS 537
+ + DV+++G+ + EL++ G KP +
Sbjct: 196 IYTHQSDVWSYGVTVWELMTFGSKPYDG 223
>pdb|2XIR|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Pf-00337210 (N,2-Dimethyl-6-(7-(2-Morpholinoethoxy)
Quinolin-4-Yloxy)benzofuran-3-Carboxamide)
pdb|4AG8|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Axitinib (Ag-013736)
(N-Methyl-2-(3-((E)-2-Pyridin-2-
Yl-Vinyl)-1h-Indazol-6-Ylsulfanyl)-Benzamide)
Length = 316
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 50/196 (25%), Positives = 97/196 (49%), Gaps = 20/196 (10%)
Query: 356 KELAVKILK--PSEDVLKEFASEIEIITAL-HHRNIISLFGFCFEDNN-LLLVYDFLSRG 411
+ +AVK+LK + + SE++I+ + HH N+++L G C + L+++ +F G
Sbjct: 58 RTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFG 117
Query: 412 SLEENLHGNKKDGNAFGWT--ERYK----------VAVGVAEALDYLHNSCEQPVIHKDV 459
+L L + + + + YK + VA+ +++L + + IH+D+
Sbjct: 118 NLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLAS---RKCIHRDL 174
Query: 460 KSSNILLSDDFEPQLSDFGLASWLSTSSSHLTCTDVAGTFGYLAPEYFMHGKVSEKIDVY 519
+ NILLS+ ++ DFGLA + ++ D ++APE + + DV+
Sbjct: 175 AARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVW 234
Query: 520 AFGIVLLELLS-GKKP 534
+FG++L E+ S G P
Sbjct: 235 SFGVLLWEIFSLGASP 250
>pdb|3U6J|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyrazolone Inhibitor
Length = 314
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 54/202 (26%), Positives = 97/202 (48%), Gaps = 32/202 (15%)
Query: 356 KELAVKILK--PSEDVLKEFASEIEIITAL-HHRNIISLFGFCFEDNN-LLLVYDFLSRG 411
+ +AVK+LK + + SE++I+ + HH N+++L G C + L+++ +F G
Sbjct: 49 RTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVITEFCKFG 108
Query: 412 SLEENLHGNKKDGNAFGWTERYKVA------------------VGVAEALDYLHNSCEQP 453
+L L + N F YKVA VA+ +++L + +
Sbjct: 109 NLSTYLRSKR---NEF---VPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLAS---RK 159
Query: 454 VIHKDVKSSNILLSDDFEPQLSDFGLASWLSTSSSHLTCTDVAGTFGYLAPEYFMHGKVS 513
IH+D+ + NILLS+ ++ DFGLA + ++ D ++APE +
Sbjct: 160 CIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYT 219
Query: 514 EKIDVYAFGIVLLELLS-GKKP 534
+ DV++FG++L E+ S G P
Sbjct: 220 IQSDVWSFGVLLWEIFSLGASP 241
>pdb|4AGC|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Axitinib (Ag-013736)
(N-Methyl-2-(
3-((E)-2-Pyridin-2-Yl-Vinyl)-1h-Indazol-6-Ylsulfanyl)-
Benzamide)
pdb|4AGD|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Sunitinib (Su11248) (N-2-
Diethylaminoethyl)-5-((Z)-(5-Fluoro-2-Oxo-1h-Indol-3-
Ylidene)methyl)-2,4-Dimethyl-1h-Pyrrole-3-Carboxamide)
pdb|4ASD|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Sorafenib (Bay 43-9006)
pdb|4ASE|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Tivozanib (Av-951)
Length = 353
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 52/197 (26%), Positives = 95/197 (48%), Gaps = 31/197 (15%)
Query: 356 KELAVKILK--PSEDVLKEFASEIEIITAL-HHRNIISLFGFCFEDNN-LLLVYDFLSRG 411
+ +AVK+LK + + SE++I+ + HH N+++L G C + L+++ +F G
Sbjct: 95 RTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFG 154
Query: 412 SLEENLHGNKKDGNAFGWTERYKVA------------------VGVAEALDYLHNSCEQP 453
+L L + N F YKVA VA+ +++L + +
Sbjct: 155 NLSTYLRSKR---NEF---VPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLAS---RK 205
Query: 454 VIHKDVKSSNILLSDDFEPQLSDFGLASWLSTSSSHLTCTDVAGTFGYLAPEYFMHGKVS 513
IH+D+ + NILLS+ ++ DFGLA + ++ D ++APE +
Sbjct: 206 CIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYT 265
Query: 514 EKIDVYAFGIVLLELLS 530
+ DV++FG++L E+ S
Sbjct: 266 IQSDVWSFGVLLWEIFS 282
>pdb|3EWH|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridyl-Pyrimidine Benzimidazole Inhibitor
Length = 314
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 54/202 (26%), Positives = 96/202 (47%), Gaps = 32/202 (15%)
Query: 356 KELAVKILK--PSEDVLKEFASEIEIITAL-HHRNIISLFGFCFEDNN-LLLVYDFLSRG 411
+ +AVK+LK + + SE++I+ + HH N+++L G C + L+++ +F G
Sbjct: 49 RTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVITEFCKFG 108
Query: 412 SLEENLHGNKKDGNAFGWTERYKVA------------------VGVAEALDYLHNSCEQP 453
+L L + N F YKVA VA+ +++L +
Sbjct: 109 NLSTYLRSKR---NEF---VPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFL---ASRK 159
Query: 454 VIHKDVKSSNILLSDDFEPQLSDFGLASWLSTSSSHLTCTDVAGTFGYLAPEYFMHGKVS 513
IH+D+ + NILLS+ ++ DFGLA + ++ D ++APE +
Sbjct: 160 CIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYT 219
Query: 514 EKIDVYAFGIVLLELLS-GKKP 534
+ DV++FG++L E+ S G P
Sbjct: 220 IQSDVWSFGVLLWEIFSLGASP 241
>pdb|4EOK|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Nu6102
pdb|4EOK|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Nu6102
pdb|4EOL|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Ro3306
pdb|4EOL|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Ro3306
Length = 300
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 56/212 (26%), Positives = 101/212 (47%), Gaps = 15/212 (7%)
Query: 327 LSATSNFLPEYLVGKGGHSHVY--RGCLPDGKELAVKILK---PSEDVLKEFASEIEIIT 381
L + NF +G+G + VY R L G+ +A+K ++ +E V EI ++
Sbjct: 1 LGSMENFQKVEKIGEGTYGVVYKARNKL-TGEVVALKKIRLDTETEGVPSTAIREISLLK 59
Query: 382 ALHHRNIISLFGFCFEDNNLLLVYDFLSRGSLEENLHGNKKDGNAFGWTERYKVAVGVAE 441
L+H NI+ L +N L LV++FLS L++ + + G + Y + +
Sbjct: 60 ELNHPNIVKLLDVIHTENKLYLVFEFLSM-DLKDFMDASALTGIPLPLIKSY--LFQLLQ 116
Query: 442 ALDYLHNSCEQPVIHKDVKSSNILLSDDFEPQLSDFGLASWLSTSSSHLTCTDVAGTFGY 501
L + H+ V+H+D+K N+L++ + +L+DFGLA T T Y
Sbjct: 117 GLAFCHS---HRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVR--TYXHEVVTLWY 171
Query: 502 LAPEYFMHGK-VSEKIDVYAFGIVLLELLSGK 532
APE + K S +D+++ G + E+++ +
Sbjct: 172 RAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 203
>pdb|4EOJ|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With Atp
pdb|4EOJ|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With Atp
Length = 302
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 56/212 (26%), Positives = 101/212 (47%), Gaps = 15/212 (7%)
Query: 327 LSATSNFLPEYLVGKGGHSHVY--RGCLPDGKELAVKILK---PSEDVLKEFASEIEIIT 381
L + NF +G+G + VY R L G+ +A+K ++ +E V EI ++
Sbjct: 2 LGSMENFQKVEKIGEGTYGVVYKARNKL-TGEVVALKKIRLDTETEGVPSTAIREISLLK 60
Query: 382 ALHHRNIISLFGFCFEDNNLLLVYDFLSRGSLEENLHGNKKDGNAFGWTERYKVAVGVAE 441
L+H NI+ L +N L LV++FLS L++ + + G + Y + +
Sbjct: 61 ELNHPNIVKLLDVIHTENKLYLVFEFLSM-DLKDFMDASALTGIPLPLIKSY--LFQLLQ 117
Query: 442 ALDYLHNSCEQPVIHKDVKSSNILLSDDFEPQLSDFGLASWLSTSSSHLTCTDVAGTFGY 501
L + H+ V+H+D+K N+L++ + +L+DFGLA T T Y
Sbjct: 118 GLAFCHS---HRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVR--TYXHEVVTLWY 172
Query: 502 LAPEYFMHGK-VSEKIDVYAFGIVLLELLSGK 532
APE + K S +D+++ G + E+++ +
Sbjct: 173 RAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 204
>pdb|4G31|A Chain A, Crystal Structure Of Gsk6414 Bound To Perk (R587-R1092,
Delete A660- T867) At 2.28 A Resolution
pdb|4G34|A Chain A, Crystal Structure Of Gsk6924 Bound To Perk (R587-R1092,
Delete A660- T867) At 2.70 A Resolution
Length = 299
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 56/226 (24%), Positives = 99/226 (43%), Gaps = 33/226 (14%)
Query: 331 SNFLPEYLVGKGGHSHVY--RGCLPDGKELAVKILKPSEDVLKE-FASEIEIITALHHRN 387
++F P +G+GG V+ + + D +I P+ ++ +E E++ + L H
Sbjct: 5 TDFEPIQCLGRGGFGVVFEAKNKVDDCNYAIKRIRLPNRELAREKVMREVKALAKLEHPG 64
Query: 388 IISLFGFCFEDNN-----------LLLVYDFLSRGSLEENLHGNKKDGNAFGWTER---Y 433
I+ F E N L + L R +ENL ER
Sbjct: 65 IVRYFNAWLEKNTTEKLQPSSPKVYLYIQMQLCR---KENLKDWMNGRCTIEERERSVCL 121
Query: 434 KVAVGVAEALDYLHNSCEQPVIHKDVKSSNILLSDDFEPQLSDFGLASWLSTSSSHLTC- 492
+ + +AEA+++LH+ + ++H+D+K SNI + D ++ DFGL + + T
Sbjct: 122 HIFLQIAEAVEFLHS---KGLMHRDLKPSNIFFTMDDVVKVGDFGLVTAMDQDEEEQTVL 178
Query: 493 ---------TDVAGTFGYLAPEYFMHGKVSEKIDVYAFGIVLLELL 529
T GT Y++PE S K+D+++ G++L ELL
Sbjct: 179 TPMPAYARHTGQVGTKLYMSPEQIHGNSYSHKVDIFSLGLILFELL 224
>pdb|2JIT|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation
pdb|2JIT|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation
Length = 327
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 47/208 (22%), Positives = 101/208 (48%), Gaps = 15/208 (7%)
Query: 338 LVGKGGHSHVYRGC-LPDGKEL----AVKILK--PSEDVLKEFASEIEIITALHHRNIIS 390
++G G VY+G +P+G+++ A+K L+ S KE E ++ ++ + ++
Sbjct: 22 VLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCR 81
Query: 391 LFGFCFEDNNLLLVYDFLSRGSLEENLHGNKKDGNAFGWTERYKVAVGVAEALDYLHNSC 450
L G C + + L+ + G L + + +K + G V +A+ ++YL +
Sbjct: 82 LLGICL-TSTVQLIMQLMPFGCLLDYVREHKDN---IGSQYLLNWCVQIAKGMNYLED-- 135
Query: 451 EQPVIHKDVKSSNILLSDDFEPQLSDFGLASWLSTSSSHLTCTDVAGTFGYLAPEYFMHG 510
+ ++H+D+ + N+L+ +++DFGLA L ++A E +H
Sbjct: 136 -RRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHR 194
Query: 511 KVSEKIDVYAFGIVLLELLS-GKKPINS 537
+ + DV+++G+ + EL++ G KP +
Sbjct: 195 IYTHQSDVWSYGVTVWELMTFGSKPYDG 222
>pdb|2AC3|A Chain A, Structure Of Human Mnk2 Kinase Domain
Length = 316
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 65/219 (29%), Positives = 110/219 (50%), Gaps = 25/219 (11%)
Query: 334 LPEYLVGKGGHSHVYRGC--LPDGKELAVKIL-KPSEDVLKEFASEIEIITALH-HRNII 389
L E ++G+G H+ V + C L +E AVKI+ K + E+E++ HRN++
Sbjct: 16 LQEDVLGEGAHARV-QTCINLITSQEYAVKIIEKQPGHIRSRVFREVEMLYQCQGHRNVL 74
Query: 390 SLFGFCFEDNNLLLVYDFLSRGSLEENLHGNKKDGNAFGWTERYKVAVGVAEALDYLHNS 449
L F E++ LV++ + GS+ ++H + F E V VA ALD+LHN
Sbjct: 75 ELIEFFEEEDRFYLVFEKMRGGSILSHIHKRRH----FNELEASVVVQDVASALDFLHN- 129
Query: 450 CEQPVIHKDVKSSNILLS--DDFEP-QLSDFGLASW--LSTSSSHLTCTDV---AGTFGY 501
+ + H+D+K NIL + P ++ DF L S L+ S ++ ++ G+ Y
Sbjct: 130 --KGIAHRDLKPENILCEHPNQVSPVKICDFDLGSGIKLNGDCSPISTPELLTPCGSAEY 187
Query: 502 LAPE----YFMHGKVSEK-IDVYAFGIVLLELLSGKKPI 535
+APE + + +K D+++ G++L LLSG P
Sbjct: 188 MAPEVVEAFSEEASIYDKRCDLWSLGVILYILLSGYPPF 226
>pdb|4I24|A Chain A, Structure Of T790m Egfr Kinase Domain Co-crystallized With
Dacomitinib
pdb|4I24|B Chain B, Structure Of T790m Egfr Kinase Domain Co-crystallized With
Dacomitinib
Length = 329
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 47/208 (22%), Positives = 101/208 (48%), Gaps = 15/208 (7%)
Query: 338 LVGKGGHSHVYRGC-LPDGKEL----AVKILK--PSEDVLKEFASEIEIITALHHRNIIS 390
++G G VY+G +P+G+++ A+K L+ S KE E ++ ++ + ++
Sbjct: 24 VLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCR 83
Query: 391 LFGFCFEDNNLLLVYDFLSRGSLEENLHGNKKDGNAFGWTERYKVAVGVAEALDYLHNSC 450
L G C + + L+ + G L + + +K + G V +A+ ++YL +
Sbjct: 84 LLGICL-TSTVQLIMQLMPFGCLLDYVREHKDN---IGSQYLLNWCVQIAKGMNYLED-- 137
Query: 451 EQPVIHKDVKSSNILLSDDFEPQLSDFGLASWLSTSSSHLTCTDVAGTFGYLAPEYFMHG 510
+ ++H+D+ + N+L+ +++DFGLA L ++A E +H
Sbjct: 138 -RRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHR 196
Query: 511 KVSEKIDVYAFGIVLLELLS-GKKPINS 537
+ + DV+++G+ + EL++ G KP +
Sbjct: 197 IYTHQSDVWSYGVTVWELMTFGSKPYDG 224
>pdb|3VNT|A Chain A, Crystal Structure Of The Kinase Domain Of Human Vegfr2
With A [1, 3]thiazolo[5,4-B]pyridine Derivative
Length = 318
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 48/191 (25%), Positives = 95/191 (49%), Gaps = 19/191 (9%)
Query: 356 KELAVKILK--PSEDVLKEFASEIEIITAL-HHRNIISLFGFCFEDNN-LLLVYDFLSRG 411
+ +AVK+LK + + SE++I+ + HH N+++L G C + L+++ +F G
Sbjct: 60 RTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFG 119
Query: 412 SLEENLHGNKKDGNAF--GWTERYK----------VAVGVAEALDYLHNSCEQPVIHKDV 459
+L L + + + + YK + VA+ +++L + + IH+D+
Sbjct: 120 NLSTYLRSKRNEFVPYKEAPEDLYKDFLTLEHLICYSFQVAKGMEFLAS---RKCIHRDL 176
Query: 460 KSSNILLSDDFEPQLSDFGLASWLSTSSSHLTCTDVAGTFGYLAPEYFMHGKVSEKIDVY 519
+ NILLS+ ++ DFGLA + ++ D ++APE + + DV+
Sbjct: 177 AARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVW 236
Query: 520 AFGIVLLELLS 530
+FG++L E+ S
Sbjct: 237 SFGVLLWEIFS 247
>pdb|3IKA|A Chain A, Crystal Structure Of Egfr 696-1022 T790m Mutant Covalently
Binding To Wz4002
pdb|3IKA|B Chain B, Crystal Structure Of Egfr 696-1022 T790m Mutant Covalently
Binding To Wz4002
Length = 331
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 47/208 (22%), Positives = 101/208 (48%), Gaps = 15/208 (7%)
Query: 338 LVGKGGHSHVYRGC-LPDGKEL----AVKILK--PSEDVLKEFASEIEIITALHHRNIIS 390
++G G VY+G +P+G+++ A+K L+ S KE E ++ ++ + ++
Sbjct: 26 VLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCR 85
Query: 391 LFGFCFEDNNLLLVYDFLSRGSLEENLHGNKKDGNAFGWTERYKVAVGVAEALDYLHNSC 450
L G C + + L+ + G L + + +K + G V +A+ ++YL +
Sbjct: 86 LLGICL-TSTVQLIMQLMPFGCLLDYVREHKDN---IGSQYLLNWCVQIAKGMNYLED-- 139
Query: 451 EQPVIHKDVKSSNILLSDDFEPQLSDFGLASWLSTSSSHLTCTDVAGTFGYLAPEYFMHG 510
+ ++H+D+ + N+L+ +++DFGLA L ++A E +H
Sbjct: 140 -RRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHR 198
Query: 511 KVSEKIDVYAFGIVLLELLS-GKKPINS 537
+ + DV+++G+ + EL++ G KP +
Sbjct: 199 IYTHQSDVWSYGVTVWELMTFGSKPYDG 226
>pdb|4G5P|A Chain A, Crystal Structure Of Egfr Kinase T790m In Complex With
Bibw2992
pdb|4G5P|B Chain B, Crystal Structure Of Egfr Kinase T790m In Complex With
Bibw2992
Length = 330
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 47/208 (22%), Positives = 101/208 (48%), Gaps = 15/208 (7%)
Query: 338 LVGKGGHSHVYRGC-LPDGKEL----AVKILK--PSEDVLKEFASEIEIITALHHRNIIS 390
++G G VY+G +P+G+++ A+K L+ S KE E ++ ++ + ++
Sbjct: 25 VLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCR 84
Query: 391 LFGFCFEDNNLLLVYDFLSRGSLEENLHGNKKDGNAFGWTERYKVAVGVAEALDYLHNSC 450
L G C + + L+ + G L + + +K + G V +A+ ++YL +
Sbjct: 85 LLGICL-TSTVQLIMQLMPFGCLLDYVREHKDN---IGSQYLLNWCVQIAKGMNYLED-- 138
Query: 451 EQPVIHKDVKSSNILLSDDFEPQLSDFGLASWLSTSSSHLTCTDVAGTFGYLAPEYFMHG 510
+ ++H+D+ + N+L+ +++DFGLA L ++A E +H
Sbjct: 139 -RRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHR 197
Query: 511 KVSEKIDVYAFGIVLLELLS-GKKPINS 537
+ + DV+++G+ + EL++ G KP +
Sbjct: 198 IYTHQSDVWSYGVTVWELMTFGSKPYDG 225
>pdb|1VZO|A Chain A, The Structure Of The N-Terminal Kinase Domain Of Msk1
Reveals A Novel Autoinhibitory Conformation For A Dual
Kinase Protein
Length = 355
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 55/212 (25%), Positives = 104/212 (49%), Gaps = 24/212 (11%)
Query: 355 GKELAVKILKPSEDVLK-----EFASEIEIITALHHRNIISLFGFCFE-DNNLLLVYDFL 408
GK A+K+LK + V K +E +++ + + + F+ + L L+ D++
Sbjct: 82 GKLYAMKVLKKATIVQKAKTTEHTRTERQVLEHIRQSPFLVTLHYAFQTETKLHLILDYI 141
Query: 409 SRGSLEENLHGNKKDGNAFGWTERYKVAVGVAE---ALDYLHNSCEQPVIHKDVKSSNIL 465
+ G L +L ++ +TE ++V + V E AL++LH +I++D+K NIL
Sbjct: 142 NGGELFTHLSQRER------FTE-HEVQIYVGEIVLALEHLHKLG---IIYRDIKLENIL 191
Query: 466 LSDDFEPQLSDFGLASWLSTSSSHLTCTDVAGTFGYLAPEYFMHGKVS--EKIDVYAFGI 523
L + L+DFGL+ + D GT Y+AP+ G + +D ++ G+
Sbjct: 192 LDSNGHVVLTDFGLSKEFVADETE-RAYDFCGTIEYMAPDIVRGGDSGHDKAVDWWSLGV 250
Query: 524 VLLELLSGKKPINSENPKGQESLVMWAKPILK 555
++ ELL+G P + K ++ + ++ ILK
Sbjct: 251 LMYELLTGASPFTVDGEKNSQAEI--SRRILK 280
>pdb|1GZ8|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 2-Amino-6-(3'-Methyl-2'-Oxo)butoxypurine
pdb|2R3Q|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3M|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3I|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3N|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3O|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3P|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3K|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3J|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3L|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|1W8C|A Chain A, Co-crystal Structure Of
6-cyclohexylmethoxy-8-isopropyl-9h- Purin-2-ylamine And
Monomeric Cdk2
Length = 299
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 53/200 (26%), Positives = 98/200 (49%), Gaps = 15/200 (7%)
Query: 339 VGKGGHSHVY--RGCLPDGKELAVKILK---PSEDVLKEFASEIEIITALHHRNIISLFG 393
+G+G + VY R L G+ +A+K ++ +E V EI ++ L+H NI+ L
Sbjct: 11 IGEGTYGVVYKARNKL-TGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLD 69
Query: 394 FCFEDNNLLLVYDFLSRGSLEENLHGNKKDGNAFGWTERYKVAVGVAEALDYLHNSCEQP 453
+N L LV++FL + L++ + + G + Y + + L + H+
Sbjct: 70 VIHTENKLYLVFEFLHQ-DLKKFMDASALTGIPLPLIKSY--LFQLLQGLAFCHS---HR 123
Query: 454 VIHKDVKSSNILLSDDFEPQLSDFGLASWLSTSSSHLTCTDVAGTFGYLAPEYFMHGK-V 512
V+H+D+K N+L++ + +L+DFGLA T T T Y APE + K
Sbjct: 124 VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVR--TYTHEVVTLWYRAPEILLGXKYY 181
Query: 513 SEKIDVYAFGIVLLELLSGK 532
S +D+++ G + E+++ +
Sbjct: 182 STAVDIWSLGCIFAEMVTRR 201
>pdb|2ACX|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 6
Bound To Amppnp
pdb|2ACX|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 6
Bound To Amppnp
Length = 576
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 45/168 (26%), Positives = 83/168 (49%), Gaps = 10/168 (5%)
Query: 375 SEIEIITALHHRNIISLFGFCFEDNN-LLLVYDFLSRGSLEENLHGNKKDGNAFGWTERY 433
+E +I+ ++ R ++SL + +E + L LV ++ G L+ +++ + G F
Sbjct: 233 NEKQILEKVNSRFVVSL-AYAYETKDALCLVLTLMNGGDLKFHIYHMGQAG--FPEARAV 289
Query: 434 KVAVGVAEALDYLHNSCEQPVIHKDVKSSNILLSDDFEPQLSDFGLASWLSTSSSHLTCT 493
A + L+ LH + ++++D+K NILL D ++SD GLA + T
Sbjct: 290 FYAAEICCGLEDLHR---ERIVYRDLKPENILLDDHGHIRISDLGLAVHVPEGQ---TIK 343
Query: 494 DVAGTFGYLAPEYFMHGKVSEKIDVYAFGIVLLELLSGKKPINSENPK 541
GT GY+APE + + + D +A G +L E+++G+ P K
Sbjct: 344 GRVGTVGYMAPEVVKNERYTFSPDWWALGCLLYEMIAGQSPFQQRKKK 391
>pdb|2B9F|A Chain A, Crystal Structure Of Non-Phosphorylated Fus3
Length = 353
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 59/222 (26%), Positives = 105/222 (47%), Gaps = 25/222 (11%)
Query: 330 TSNFLPEYLVGKGGHSHVYRGC-LPDGKELAVKILKPSEDVLKEFAS--EIEIITALHHR 386
+S+F + L+G+G + V P G+ +A+K ++P + L + EI+I+ H
Sbjct: 10 SSDFQLKSLLGEGAYGVVCSATHKPTGEIVAIKKIEPFDKPLFALRTLREIKILKHFKHE 69
Query: 387 NIISLFGF----CFEDNNLLLVYDFLSRGSLEENLHGNKKDGNAFGWTERYKVAVGVAEA 442
NII++F FE+ N + + L + L + + + A
Sbjct: 70 NIITIFNIQRPDSFENFNEVYIIQELMQTDLHRVISTQMLSDDHIQY-----FIYQTLRA 124
Query: 443 LDYLHNSCEQPVIHKDVKSSNILLSDDFEPQLSDFGLASWLSTSSSHLT--------CTD 494
+ LH S VIH+D+K SN+L++ + + ++ DFGLA + S++ + T+
Sbjct: 125 VKVLHGSN---VIHRDLKPSNLLINSNCDLKVCDFGLARIIDESAADNSEPTGQQSGMTE 181
Query: 495 VAGTFGYLAPEYFM-HGKVSEKIDVYAFGIVLLELLSGKKPI 535
T Y APE + K S +DV++ G +L EL ++PI
Sbjct: 182 YVATRWYRAPEVMLTSAKYSRAMDVWSCGCILAELFL-RRPI 222
>pdb|2F9G|A Chain A, Crystal Structure Of Fus3 Phosphorylated On Tyr182
Length = 353
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 59/222 (26%), Positives = 105/222 (47%), Gaps = 25/222 (11%)
Query: 330 TSNFLPEYLVGKGGHSHVYRGC-LPDGKELAVKILKPSEDVLKEFAS--EIEIITALHHR 386
+S+F + L+G+G + V P G+ +A+K ++P + L + EI+I+ H
Sbjct: 10 SSDFQLKSLLGEGAYGVVCSATHKPTGEIVAIKKIEPFDKPLFALRTLREIKILKHFKHE 69
Query: 387 NIISLFGF----CFEDNNLLLVYDFLSRGSLEENLHGNKKDGNAFGWTERYKVAVGVAEA 442
NII++F FE+ N + + L + L + + + A
Sbjct: 70 NIITIFNIQRPDSFENFNEVYIIQELMQTDLHRVISTQMLSDDHIQY-----FIYQTLRA 124
Query: 443 LDYLHNSCEQPVIHKDVKSSNILLSDDFEPQLSDFGLASWLSTSSSHLT--------CTD 494
+ LH S VIH+D+K SN+L++ + + ++ DFGLA + S++ + T+
Sbjct: 125 VKVLHGSN---VIHRDLKPSNLLINSNCDLKVCDFGLARIIDESAADNSEPTGQQSGMTE 181
Query: 495 VAGTFGYLAPEYFM-HGKVSEKIDVYAFGIVLLELLSGKKPI 535
T Y APE + K S +DV++ G +L EL ++PI
Sbjct: 182 XVATRWYRAPEVMLTSAKYSRAMDVWSCGCILAELFL-RRPI 222
>pdb|4EOM|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With Atp
pdb|4EOM|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With Atp
Length = 301
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 56/212 (26%), Positives = 101/212 (47%), Gaps = 15/212 (7%)
Query: 327 LSATSNFLPEYLVGKGGHSHVY--RGCLPDGKELAVKILK---PSEDVLKEFASEIEIIT 381
L + NF +G+G + VY R L G+ +A+K ++ +E V EI ++
Sbjct: 2 LGSMENFQKVEKIGEGTYGVVYKARNKL-TGEVVALKKIRLDTETEGVPSTAIREISLLK 60
Query: 382 ALHHRNIISLFGFCFEDNNLLLVYDFLSRGSLEENLHGNKKDGNAFGWTERYKVAVGVAE 441
L+H NI+ L +N L LV++FLS L++ + + G + Y + +
Sbjct: 61 ELNHPNIVKLLDVIHTENKLYLVFEFLSM-DLKKFMDASALTGIPLPLIKSY--LFQLLQ 117
Query: 442 ALDYLHNSCEQPVIHKDVKSSNILLSDDFEPQLSDFGLASWLSTSSSHLTCTDVAGTFGY 501
L + H+ V+H+D+K N+L++ + +L+DFGLA T T Y
Sbjct: 118 GLAFCHS---HRVLHRDLKPENLLINTEGAIKLADFGLARAFGVPVR--TYXHEVVTLWY 172
Query: 502 LAPEYFMHGK-VSEKIDVYAFGIVLLELLSGK 532
APE + K S +D+++ G + E+++ +
Sbjct: 173 RAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 204
>pdb|4HJO|A Chain A, Crystal Structure Of The Inactive Egfr Tyrosine Kinase
Domain With Erlotinib
Length = 337
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 47/208 (22%), Positives = 101/208 (48%), Gaps = 15/208 (7%)
Query: 338 LVGKGGHSHVYRGC-LPDGKEL----AVKILK--PSEDVLKEFASEIEIITALHHRNIIS 390
++G G VY+G +P+G+++ A+K L+ S KE E ++ ++ + ++
Sbjct: 32 VLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCR 91
Query: 391 LFGFCFEDNNLLLVYDFLSRGSLEENLHGNKKDGNAFGWTERYKVAVGVAEALDYLHNSC 450
L G C + + L+ + G L + + +K + G V +A+ ++YL +
Sbjct: 92 LLGICL-TSTVQLITQLMPFGCLLDYVREHKDN---IGSQYLLNWCVQIAKGMNYLED-- 145
Query: 451 EQPVIHKDVKSSNILLSDDFEPQLSDFGLASWLSTSSSHLTCTDVAGTFGYLAPEYFMHG 510
+ ++H+D+ + N+L+ +++DFGLA L ++A E +H
Sbjct: 146 -RRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHR 204
Query: 511 KVSEKIDVYAFGIVLLELLS-GKKPINS 537
+ + DV+++G+ + EL++ G KP +
Sbjct: 205 IYTHQSDVWSYGVTVWELMTFGSKPYDG 232
>pdb|1VYW|A Chain A, Structure Of Cdk2CYCLIN A WITH PNU-292137
pdb|1VYW|C Chain C, Structure Of Cdk2CYCLIN A WITH PNU-292137
pdb|2C4G|A Chain A, Structure Of Cdk2-Cyclin A With Pha-533514
pdb|2C4G|C Chain C, Structure Of Cdk2-Cyclin A With Pha-533514
pdb|2BPM|A Chain A, Structure Of Cdk2-Cyclin A With Pha-630529
pdb|2BPM|C Chain C, Structure Of Cdk2-Cyclin A With Pha-630529
pdb|2BKZ|A Chain A, Structure Of Cdk2-Cyclin A With Pha-404611
pdb|2BKZ|C Chain C, Structure Of Cdk2-Cyclin A With Pha-404611
pdb|2WIH|A Chain A, Structure Of Cdk2-Cyclin A With Pha-848125
pdb|2WIH|C Chain C, Structure Of Cdk2-Cyclin A With Pha-848125
pdb|2WIP|A Chain A, Structure Of Cdk2-Cyclin A Complexed With 8-Anilino-1-
Methyl-4,5-Dihydro-1h-Pyrazolo[4,3-H] Quinazoline-3-
Carboxylic Acid
pdb|2WIP|C Chain C, Structure Of Cdk2-Cyclin A Complexed With 8-Anilino-1-
Methyl-4,5-Dihydro-1h-Pyrazolo[4,3-H] Quinazoline-3-
Carboxylic Acid
pdb|2WPA|A Chain A, Optimisation Of 6,6-Dimethyl Pyrrolo 3,4-C Pyrazoles:
Identification Of Pha-793887, A Potent Cdk Inhibitor
Suitable For Intravenous Dosing
pdb|2WPA|C Chain C, Optimisation Of 6,6-Dimethyl Pyrrolo 3,4-C Pyrazoles:
Identification Of Pha-793887, A Potent Cdk Inhibitor
Suitable For Intravenous Dosing
pdb|2WXV|A Chain A, Structure Of Cdk2-Cyclin A With A Pyrazolo(4,3-H)
Quinazoline-3-Carboxamide Inhibitor
pdb|2WXV|C Chain C, Structure Of Cdk2-Cyclin A With A Pyrazolo(4,3-H)
Quinazoline-3-Carboxamide Inhibitor
Length = 309
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 53/200 (26%), Positives = 98/200 (49%), Gaps = 15/200 (7%)
Query: 339 VGKGGHSHVY--RGCLPDGKELAVKILK---PSEDVLKEFASEIEIITALHHRNIISLFG 393
+G+G + VY R L G+ +A+K ++ +E V EI ++ L+H NI+ L
Sbjct: 15 IGEGTYGVVYKARNKL-TGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLD 73
Query: 394 FCFEDNNLLLVYDFLSRGSLEENLHGNKKDGNAFGWTERYKVAVGVAEALDYLHNSCEQP 453
+N L LV++FL + L++ + + G + Y + + L + H+
Sbjct: 74 VIHTENKLYLVFEFLHQ-DLKKFMDASALTGIPLPLIKSY--LFQLLQGLAFCHS---HR 127
Query: 454 VIHKDVKSSNILLSDDFEPQLSDFGLASWLSTSSSHLTCTDVAGTFGYLAPEYFMHGK-V 512
V+H+D+K N+L++ + +L+DFGLA T T T Y APE + K
Sbjct: 128 VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVR--TYTHEVVTLWYRAPEILLGCKYY 185
Query: 513 SEKIDVYAFGIVLLELLSGK 532
S +D+++ G + E+++ +
Sbjct: 186 STAVDIWSLGCIFAEMVTRR 205
>pdb|2W17|A Chain A, Cdk2 In Complex With The Imidazole Pyrimidine Amide,
Compound (S)-8b
pdb|3IG7|A Chain A, Novel Cdk-5 Inhibitors - Crystal Structure Of Inhibitor
Efp With Cdk-2
pdb|3IGG|A Chain A, Novel Cdk-5 Inhibitors - Crystal Structure Of Inhibitor
Efq With Cdk-2
pdb|1B38|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|1B39|A Chain A, Human Cyclin-Dependent Kinase 2 Phosphorylated On Thr 160
pdb|1E1V|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Nu2058
pdb|1E1X|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Nu6027
pdb|1H00|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1H07|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1H08|A Chain A, Cdk2 In Complex With A Disubstituted 2, 4-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|2R3R|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|4ACM|A Chain A, Cdk2 In Complex With
3-Amino-6-(4-{[2-(Dimethylamino)ethyl]
Sulfamoyl}-Phenyl)-N-Pyridin-3-Ylpyrazine-2-Carboxamide
pdb|3SW4|A Chain A, Crystal Structure Of The Cdk2 In Complex With
Thiazolylpyrimidine Inhibitor
pdb|3SW7|A Chain A, Crystal Structure Of The Cdk2 In Complex With
Thiazolylpyrimidine Inhibitor
pdb|1OIQ|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-Dependent Kinase Inhibitors Identified Through
Structure-Based Hybridisation
pdb|1V1K|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1URW|A Chain A, Cdk2 In Complex With An Imidazo[1,2-B]pyridazine
pdb|2VV9|A Chain A, Cdk2 In Complex With An Imidazole Piperazine
pdb|2W06|A Chain A, Structure Of Cdk2 In Complex With An Imidazolyl
Pyrimidine, Compound 5c
pdb|2R3G|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3H|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3F|A Chain A, Crystal Structure Of Cyclin-dependent Kinase 2 With
Inhibitor
Length = 299
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 53/200 (26%), Positives = 98/200 (49%), Gaps = 15/200 (7%)
Query: 339 VGKGGHSHVY--RGCLPDGKELAVKILK---PSEDVLKEFASEIEIITALHHRNIISLFG 393
+G+G + VY R L G+ +A+K ++ +E V EI ++ L+H NI+ L
Sbjct: 11 IGEGTYGVVYKARNKL-TGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLD 69
Query: 394 FCFEDNNLLLVYDFLSRGSLEENLHGNKKDGNAFGWTERYKVAVGVAEALDYLHNSCEQP 453
+N L LV++FL + L++ + + G + Y + + L + H+
Sbjct: 70 VIHTENKLYLVFEFLHQ-DLKKFMDASALTGIPLPLIKSY--LFQLLQGLAFCHS---HR 123
Query: 454 VIHKDVKSSNILLSDDFEPQLSDFGLASWLSTSSSHLTCTDVAGTFGYLAPEYFMHGK-V 512
V+H+D+K N+L++ + +L+DFGLA T T T Y APE + K
Sbjct: 124 VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVR--TYTHEVVTLWYRAPEILLGCKYY 181
Query: 513 SEKIDVYAFGIVLLELLSGK 532
S +D+++ G + E+++ +
Sbjct: 182 STAVDIWSLGCIFAEMVTRR 201
>pdb|1FIN|A Chain A, Cyclin A-Cyclin-Dependent Kinase 2 Complex
pdb|1FIN|C Chain C, Cyclin A-Cyclin-Dependent Kinase 2 Complex
pdb|1CKP|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Purvalanol B
pdb|1BUH|A Chain A, Crystal Structure Of The Human Cdk2 Kinase Complex With
Cell Cycle-Regulatory Protein Ckshs1
pdb|1DM2|A Chain A, Human Cyclin-Dependent Kinase 2 Complexed With The
Inhibitor Hymenialdisine
pdb|1DI8|A Chain A, The Structure Of Cyclin-Dependent Kinase 2 (Cdk2) In
Complex With
4-[3-Hydroxyanilino]-6,7-Dimethoxyquinazoline
pdb|1F5Q|A Chain A, Crystal Structure Of Murine Gamma Herpesvirus Cyclin
Complexed To Human Cyclin Dependent Kinase 2
pdb|1F5Q|C Chain C, Crystal Structure Of Murine Gamma Herpesvirus Cyclin
Complexed To Human Cyclin Dependent Kinase 2
pdb|1FVT|A Chain A, The Structure Of Cyclin-Dependent Kinase 2 (Cdk2) In
Complex With An Oxindole Inhibitor
pdb|1FVV|A Chain A, The Structure Of Cdk2CYCLIN A IN COMPLEX WITH AN OXINDOLE
Inhibitor
pdb|1FVV|C Chain C, The Structure Of Cdk2CYCLIN A IN COMPLEX WITH AN OXINDOLE
Inhibitor
pdb|1JSV|A Chain A, The Structure Of Cyclin-dependent Kinase 2 (cdk2) In
Complex With 4-[(6-amino-4-pyrimidinyl)
Amino]benzenesulfonamide
pdb|1G5S|A Chain A, Crystal Structure Of Human Cyclin Dependent Kinase 2
(Cdk2) In Complex With The Inhibitor H717
pdb|1JVP|P Chain P, Crystal Structure Of Human Cdk2 (Unphosphorylated) In
Complex With Pkf049-365
pdb|1GIH|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|1KE5|A Chain A, Cdk2 Complexed With N-methyl-4-{[(2-oxo-1,2-dihydro-3h-
Indol-3-ylidene)methyl]amino}benzenesulfonamide
pdb|1KE6|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With
N-Methyl-{4-
[2-(7-Oxo-6,7-Dihydro-8h-[1,3]thiazolo[5,4-E]indol-8-
Ylidene)hydrazino]phenyl}methanesulfonamide
pdb|1KE7|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With 3-{[(2,2-
Dioxido-1,
3-Dihydro-2-Benzothien-5-Yl)amino]methylene}-5-
(1,3-Oxazol-5-Yl)-1,3-Dihydro-2h-Indol-2-One
pdb|1KE8|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With
4-{[(2-Oxo-
1,2-Dihydro-3h-Indol-3-Ylidene)methyl]amino}-N-(1,3-
Thiazol-2-Yl)benzenesulfonamide
pdb|1KE9|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With 3-{[4-
({[amino(Imino)methyl]aminosulfonyl)anilino]methylene}-
2- Oxo-2,3-Dihydro-1h-Indole
pdb|1H0V|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor
2-Amino-6-[(R)-Pyrrolidino-5'-Yl]methoxypurine
pdb|1H0W|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 2-Amino-6-[cyclohex-3-Enyl]methoxypurine
pdb|1P2A|A Chain A, The Structure Of Cyclin Dependent Kinase 2 (Ckd2) With A
Trisubstituted Naphthostyril Inhibitor
pdb|1OKV|A Chain A, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Ile-Phe-Nh2
pdb|1OKV|C Chain C, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Ile-Phe-Nh2
pdb|1OKW|A Chain A, Cyclin A Binding Groove Inhibitor
Ac-Arg-Arg-Leu-Asn-(M-Cl-Phe)-Nh2
pdb|1OKW|C Chain C, Cyclin A Binding Groove Inhibitor
Ac-Arg-Arg-Leu-Asn-(M-Cl-Phe)-Nh2
pdb|1OL1|A Chain A, Cyclin A Binding Groove Inhibitor
H-Cit-Cit-Leu-Ile-(P-F-Phe)-Nh2
pdb|1OL1|C Chain C, Cyclin A Binding Groove Inhibitor
H-Cit-Cit-Leu-Ile-(P-F-Phe)-Nh2
pdb|1OL2|A Chain A, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Asn-(P-F-Phe)-Nh2
pdb|1OL2|C Chain C, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Asn-(P-F-Phe)-Nh2
pdb|1PW2|A Chain A, Apo Structure Of Human Cyclin-Dependent Kinase 2
pdb|1PXI|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 4-(2,5-dichloro-thiophen-3-yl)-pyrimidin-2-
Ylamine
pdb|1PXJ|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-Ylamine
pdb|1PXK|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
N-[4-(2,4-dimethyl-thiazol-5-yl)pyrimidin-2-yl]-
N'-hydroxyiminoformamide
pdb|1PXL|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
[4-(2,4-dimethyl-thiazol-5-yl)-pyrimidin-2-yl]-
(4-trifluoromethyl-phenyl)-amine
pdb|1R78|A Chain A, Cdk2 Complex With A 4-alkynyl Oxindole Inhibitor
pdb|1PXM|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 3-[4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-
Ylamino]-Phenol
pdb|1PXN|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 4-[4-(4-Methyl-2-Methylamino-Thiazol-5-Yl)-
Pyrimidin-2-Ylamino]-Phenol
pdb|1PXO|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
[4-(2-Amino-4-Methyl-Thiazol-5-Yl)-Pyrimidin-2-
Yl]-(3-Nitro-Phenyl)-Amine
pdb|1PXP|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
N-[4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-Yl]-
N',N'-Dimethyl-Benzene-1,4-Diamine
pdb|1VYZ|A Chain A, Structure Of Cdk2 Complexed With Pnu-181227
pdb|1PYE|A Chain A, Crystal Structure Of Cdk2 With Inhibitor
pdb|1URC|A Chain A, Cyclin A Binding Groove Inhibitor Ace-Arg-Lys-Leu- Phe-Gly
pdb|1URC|C Chain C, Cyclin A Binding Groove Inhibitor Ace-Arg-Lys-Leu- Phe-Gly
pdb|1W0X|C Chain C, Crystals Structure Of Human Cdk2 In Complex With The
Inhibitor Olomoucine.
pdb|1WCC|A Chain A, Screening For Fragment Binding By X-Ray Crystallography
pdb|1Y8Y|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Pyrazolo[1, 5-A]pyrimidine Inhibitor
pdb|1Y91|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Pyrazolo[1, 5-A]pyrimidine Inhibitor
pdb|2BHE|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 5-Bromo-Indirubine
pdb|2BHH|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 4-Hydroxypiperindinesulfonyl-Indirubine
pdb|2B52|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With Dph-
042562
pdb|2B53|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With Din-
234325
pdb|2B54|A Chain A, Human Cyclin Dependent Kinase 2 (Ckd2)complexed With Din-
232305
pdb|2B55|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With
Indenopyraxole Din-101312
pdb|2BTR|A Chain A, Structure Of Cdk2 Complexed With Pnu-198873
pdb|2BTS|A Chain A, Structure Of Cdk2 Complexed With Pnu-230032
pdb|2C68|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C69|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6I|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6K|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6L|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6M|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6O|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2EXM|A Chain A, Human Cdk2 In Complex With Isopentenyladenine
pdb|1YKR|A Chain A, Crystal Structure Of Cdk2 With An Aminoimidazo Pyridine
Inhibitor
pdb|2A0C|X Chain X, Human Cdk2 In Complex With Olomoucine Ii, A Novel 2,6,9-
Trisubstituted Purine Cyclin-Dependent Kinase Inhibitor
pdb|2C5N|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5N|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5O|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5O|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5V|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5V|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5X|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5X|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5Y|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2A4L|A Chain A, Human Cyclin-Dependent Kinase 2 In Complex With
Roscovitine
pdb|2FVD|A Chain A, Cyclin Dependent Kinase 2 (Cdk2) With Diaminopyrimidine
Inhibitor
pdb|2I40|A Chain A, Cdk2CYCLIN A COMPLEXED WITH A THIOPHENE CARBOXAMIDE
INHIBITOR
pdb|2I40|C Chain C, Cdk2CYCLIN A COMPLEXED WITH A THIOPHENE CARBOXAMIDE
INHIBITOR
pdb|2CLX|A Chain A, 4-Arylazo-3,5-Diamino-1h-Pyrazole Cdk Inhibitors: Sar
Study, Crystal Structure In Complex With Cdk2,
Selectivity, And Cellular Effects
pdb|2DUV|A Chain A, Structure Of Cdk2 With A 3-Hydroxychromones
pdb|2UUE|A Chain A, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2UUE|C Chain C, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2UZN|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZO|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2V0D|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|1AQ1|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Staurosporine
pdb|1HCK|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|1HCL|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|2J9M|A Chain A, Crystal Structure Of Cdk2 In Complex With Macrocyclic
Aminopyrimidine
pdb|2V22|A Chain A, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2V22|C Chain C, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2VTA|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTH|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design
pdb|2VTI|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTJ|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTL|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTM|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTN|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTO|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTP|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTQ|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTR|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTS|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTT|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VU3|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2R64|A Chain A, Crystal Structure Of A 3-Aminoindazole Compound With Cdk2
pdb|2W05|A Chain A, Structure Of Cdk2 In Complex With An Imidazolyl
Pyrimidine, Compound 5b
pdb|3EID|A Chain A, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EID|C Chain C, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EJ1|A Chain A, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EJ1|C Chain C, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EOC|A Chain A, Cdk2/cyclina Complexed With A Imidazo Triazin-2-amine
pdb|3EOC|C Chain C, Cdk2/cyclina Complexed With A Imidazo Triazin-2-amine
pdb|2W1H|A Chain A, Fragment-Based Discovery Of The Pyrazol-4-Yl Urea
(At9283), A Multi-Targeted Kinase Inhibitor With Potent
Aurora Kinase Activity
pdb|3F5X|A Chain A, Cdk-2-Cyclin Complex With Indazole Inhibitor 9 Bound At
Its Active Site
pdb|3F5X|C Chain C, Cdk-2-Cyclin Complex With Indazole Inhibitor 9 Bound At
Its Active Site
pdb|3FZ1|A Chain A, Crystal Structure Of A Benzthiophene Inhibitor Bound To
Human Cyclin-Dependent Kinase-2 (Cdk-2)
pdb|2WEV|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WEV|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WFY|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WFY|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WHB|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WHB|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2X1N|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2X1N|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|3LFN|A Chain A, Crystal Structure Of Cdk2 With Sar57, An Aminoindazole
Type Inhibitor
pdb|3LFQ|A Chain A, Crystal Structure Of Cdk2 With Sar60, An Aminoindazole
Type Inhibitor
pdb|3LFS|A Chain A, Crystal Structure Of Cdk2 With Sar37, An Aminoindazole
Type Inhibitor
pdb|2XMY|A Chain A, Discovery And Characterisation Of
2-Anilino-4-(Thiazol-5-Yl) Pyrimidine Transcriptional
Cdk Inhibitors As Anticancer Agents
pdb|2XNB|A Chain A, Discovery And Characterisation Of
2-Anilino-4-(Thiazol-5-Yl) Pyrimidine Transcriptional
Cdk Inhibitors As Anticancer Agents
pdb|3LE6|A Chain A, The Structure Of Cyclin Dependent Kinase 2 (Ckd2) With A
Pyrazolobenzodiazepine Inhibitor
pdb|3NS9|A Chain A, Crystal Structure Of Cdk2 In Complex With Inhibitor Bs-194
pdb|3S2P|A Chain A, Crystal Structure Of Cdk2 With A 2-Aminopyrimidine
Compound
pdb|3UNJ|A Chain A, Cdk2 In Complex With Inhibitor Yl1-038-31
pdb|3UNK|A Chain A, Cdk2 In Complex With Inhibitor Yl5-083
pdb|3TI1|A Chain A, Cdk2 In Complex With Sunitinib
pdb|3TIY|A Chain A, Cdk2 In Complex With Nsc 35676
pdb|3TIZ|A Chain A, Cdk2 In Complex With Nsc 111848
Length = 298
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 53/200 (26%), Positives = 98/200 (49%), Gaps = 15/200 (7%)
Query: 339 VGKGGHSHVY--RGCLPDGKELAVKILK---PSEDVLKEFASEIEIITALHHRNIISLFG 393
+G+G + VY R L G+ +A+K ++ +E V EI ++ L+H NI+ L
Sbjct: 10 IGEGTYGVVYKARNKL-TGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLD 68
Query: 394 FCFEDNNLLLVYDFLSRGSLEENLHGNKKDGNAFGWTERYKVAVGVAEALDYLHNSCEQP 453
+N L LV++FL + L++ + + G + Y + + L + H+
Sbjct: 69 VIHTENKLYLVFEFLHQ-DLKKFMDASALTGIPLPLIKSY--LFQLLQGLAFCHS---HR 122
Query: 454 VIHKDVKSSNILLSDDFEPQLSDFGLASWLSTSSSHLTCTDVAGTFGYLAPEYFMHGK-V 512
V+H+D+K N+L++ + +L+DFGLA T T T Y APE + K
Sbjct: 123 VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVR--TYTHEVVTLWYRAPEILLGCKYY 180
Query: 513 SEKIDVYAFGIVLLELLSGK 532
S +D+++ G + E+++ +
Sbjct: 181 STAVDIWSLGCIFAEMVTRR 200
>pdb|2J5F|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With An
Irreversible Inhibitor 34-Jab
pdb|2ITW|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Afn941
pdb|2ITX|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Amp- Pnp
pdb|2ITY|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Iressa
pdb|2J6M|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Aee788
pdb|3POZ|A Chain A, Egfr Kinase Domain Complexed With Tak-285
Length = 327
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 47/208 (22%), Positives = 101/208 (48%), Gaps = 15/208 (7%)
Query: 338 LVGKGGHSHVYRGC-LPDGKEL----AVKILK--PSEDVLKEFASEIEIITALHHRNIIS 390
++G G VY+G +P+G+++ A+K L+ S KE E ++ ++ + ++
Sbjct: 22 VLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCR 81
Query: 391 LFGFCFEDNNLLLVYDFLSRGSLEENLHGNKKDGNAFGWTERYKVAVGVAEALDYLHNSC 450
L G C + + L+ + G L + + +K + G V +A+ ++YL +
Sbjct: 82 LLGICL-TSTVQLITQLMPFGCLLDYVREHKDN---IGSQYLLNWCVQIAKGMNYLED-- 135
Query: 451 EQPVIHKDVKSSNILLSDDFEPQLSDFGLASWLSTSSSHLTCTDVAGTFGYLAPEYFMHG 510
+ ++H+D+ + N+L+ +++DFGLA L ++A E +H
Sbjct: 136 -RRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHR 194
Query: 511 KVSEKIDVYAFGIVLLELLS-GKKPINS 537
+ + DV+++G+ + EL++ G KP +
Sbjct: 195 IYTHQSDVWSYGVTVWELMTFGSKPYDG 222
>pdb|2GS7|A Chain A, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|2GS7|B Chain B, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|A Chain A, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|B Chain B, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|C Chain C, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|D Chain D, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
Length = 330
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 47/208 (22%), Positives = 101/208 (48%), Gaps = 15/208 (7%)
Query: 338 LVGKGGHSHVYRGC-LPDGKEL----AVKILK--PSEDVLKEFASEIEIITALHHRNIIS 390
++G G VY+G +P+G+++ A+K L+ S KE E ++ ++ + ++
Sbjct: 25 VLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCR 84
Query: 391 LFGFCFEDNNLLLVYDFLSRGSLEENLHGNKKDGNAFGWTERYKVAVGVAEALDYLHNSC 450
L G C + + L+ + G L + + +K + G V +A+ ++YL +
Sbjct: 85 LLGICL-TSTVQLITQLMPFGCLLDYVREHKDN---IGSQYLLNWCVQIAKGMNYLED-- 138
Query: 451 EQPVIHKDVKSSNILLSDDFEPQLSDFGLASWLSTSSSHLTCTDVAGTFGYLAPEYFMHG 510
+ ++H+D+ + N+L+ +++DFGLA L ++A E +H
Sbjct: 139 -RRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHR 197
Query: 511 KVSEKIDVYAFGIVLLELLS-GKKPINS 537
+ + DV+++G+ + EL++ G KP +
Sbjct: 198 IYTHQSDVWSYGVTVWELMTFGSKPYDG 225
>pdb|3VJO|A Chain A, Crystal Structure Of The Wild-Type Egfr Kinase Domain In
Complex With Amppnp
Length = 334
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 47/208 (22%), Positives = 101/208 (48%), Gaps = 15/208 (7%)
Query: 338 LVGKGGHSHVYRGC-LPDGKEL----AVKILK--PSEDVLKEFASEIEIITALHHRNIIS 390
++G G VY+G +P+G+++ A+K L+ S KE E ++ ++ + ++
Sbjct: 29 VLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCR 88
Query: 391 LFGFCFEDNNLLLVYDFLSRGSLEENLHGNKKDGNAFGWTERYKVAVGVAEALDYLHNSC 450
L G C + + L+ + G L + + +K + G V +A+ ++YL +
Sbjct: 89 LLGICL-TSTVQLITQLMPFGCLLDYVREHKDN---IGSQYLLNWCVQIAKGMNYLED-- 142
Query: 451 EQPVIHKDVKSSNILLSDDFEPQLSDFGLASWLSTSSSHLTCTDVAGTFGYLAPEYFMHG 510
+ ++H+D+ + N+L+ +++DFGLA L ++A E +H
Sbjct: 143 -RRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHR 201
Query: 511 KVSEKIDVYAFGIVLLELLS-GKKPINS 537
+ + DV+++G+ + EL++ G KP +
Sbjct: 202 IYTHQSDVWSYGVTVWELMTFGSKPYDG 229
>pdb|3EZR|A Chain A, Cdk-2 With Indazole Inhibitor 17 Bound At Its Active Site
pdb|3EZV|A Chain A, Cdk-2 With Indazole Inhibitor 9 Bound At Its Active Site
Length = 300
Score = 61.6 bits (148), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 53/200 (26%), Positives = 98/200 (49%), Gaps = 15/200 (7%)
Query: 339 VGKGGHSHVY--RGCLPDGKELAVKILK---PSEDVLKEFASEIEIITALHHRNIISLFG 393
+G+G + VY R L G+ +A+K ++ +E V EI ++ L+H NI+ L
Sbjct: 12 IGEGTYGVVYKARNKL-TGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLD 70
Query: 394 FCFEDNNLLLVYDFLSRGSLEENLHGNKKDGNAFGWTERYKVAVGVAEALDYLHNSCEQP 453
+N L LV++FL + L++ + + G + Y + + L + H+
Sbjct: 71 VIHTENKLYLVFEFLHQ-DLKKFMDASALTGIPLPLIKSY--LFQLLQGLAFCHS---HR 124
Query: 454 VIHKDVKSSNILLSDDFEPQLSDFGLASWLSTSSSHLTCTDVAGTFGYLAPEYFMHGK-V 512
V+H+D+K N+L++ + +L+DFGLA T T T Y APE + K
Sbjct: 125 VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVR--TYTHEVVTLWYRAPEILLGCKYY 182
Query: 513 SEKIDVYAFGIVLLELLSGK 532
S +D+++ G + E+++ +
Sbjct: 183 STAVDIWSLGCIFAEMVTRR 202
>pdb|4DFX|E Chain E, Crystal Structure Of Myristoylated K7c Catalytic Subunit
Of Camp- Dependent Protein Kinase In Complex With Sp20
And Amp-Pnp
pdb|4DFZ|E Chain E, Crystal Structure Of Myristoylated K7c Catalytic Subunit
Of Camp- Dependent Protein Kinase In Complex With Sp20
Length = 350
Score = 61.6 bits (148), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 52/191 (27%), Positives = 97/191 (50%), Gaps = 18/191 (9%)
Query: 355 GKELAVKILKPSEDV-LKEFA---SEIEIITALHHRNIISLFGFCFEDN-NLLLVYDFLS 409
G A+KIL + V LK+ +E I+ A++ ++ L F F+DN NL +V ++++
Sbjct: 66 GNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKL-EFSFKDNSNLYMVMEYVA 124
Query: 410 RGSLEENLHGNKKDGNAFGWTERYKVAVGVAEALDYLHNSCEQPVIHKDVKSSNILLSDD 469
G + +L ++ G R+ A + +YLH+ +I++D+K N+L+
Sbjct: 125 GGEMFSHL---RRIGRFXEPHARF-YAAQIVLTFEYLHSL---DLIYRDLKPENLLIDQQ 177
Query: 470 FEPQLSDFGLASWLSTSSSHLTCTDVAGTFGYLAPEYFMHGKVSEKIDVYAFGIVLLELL 529
Q++DFG A + + L GT YLAPE + ++ +D +A G+++ E+
Sbjct: 178 GYIQVTDFGFAKRVKGRTWXL-----CGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMA 232
Query: 530 SGKKPINSENP 540
+G P ++ P
Sbjct: 233 AGYPPFFADQP 243
>pdb|3PJ8|A Chain A, Structure Of Cdk2 In Complex With A
Pyrazolo[4,3-D]pyrimidine Bioisostere Of Roscovitine
Length = 299
Score = 61.6 bits (148), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 53/200 (26%), Positives = 98/200 (49%), Gaps = 15/200 (7%)
Query: 339 VGKGGHSHVY--RGCLPDGKELAVKILK---PSEDVLKEFASEIEIITALHHRNIISLFG 393
+G+G + VY R L G+ +A+K ++ +E V EI ++ L+H NI+ L
Sbjct: 11 IGEGTYGVVYKARNKL-TGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLD 69
Query: 394 FCFEDNNLLLVYDFLSRGSLEENLHGNKKDGNAFGWTERYKVAVGVAEALDYLHNSCEQP 453
+N L LV++FL + L++ + + G + Y + + L + H+
Sbjct: 70 VIHTENKLYLVFEFLHQ-DLKKFMDASALTGIPLPLIKSY--LFQLLQGLAFCHS---HR 123
Query: 454 VIHKDVKSSNILLSDDFEPQLSDFGLASWLSTSSSHLTCTDVAGTFGYLAPEYFMHGK-V 512
V+H+D+K N+L++ + +L+DFGLA T T T Y APE + K
Sbjct: 124 VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVR--TYTHEVVTLWYRAPEILLGCKYY 181
Query: 513 SEKIDVYAFGIVLLELLSGK 532
S +D+++ G + E+++ +
Sbjct: 182 STAVDIWSLGCIFAEMVTRR 201
>pdb|4ERW|A Chain A, Cdk2 In Complex With Staurosporine
Length = 306
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 53/200 (26%), Positives = 98/200 (49%), Gaps = 15/200 (7%)
Query: 339 VGKGGHSHVY--RGCLPDGKELAVKILK---PSEDVLKEFASEIEIITALHHRNIISLFG 393
+G+G + VY R L G+ +A+K ++ +E V EI ++ L+H NI+ L
Sbjct: 18 IGEGTYGVVYKARNKL-TGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLD 76
Query: 394 FCFEDNNLLLVYDFLSRGSLEENLHGNKKDGNAFGWTERYKVAVGVAEALDYLHNSCEQP 453
+N L LV++FL + L++ + + G + Y + + L + H+
Sbjct: 77 VIHTENKLYLVFEFLHQ-DLKKFMDASALTGIPLPLIKSY--LFQLLQGLAFCHS---HR 130
Query: 454 VIHKDVKSSNILLSDDFEPQLSDFGLASWLSTSSSHLTCTDVAGTFGYLAPEYFMHGK-V 512
V+H+D+K N+L++ + +L+DFGLA T T T Y APE + K
Sbjct: 131 VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVR--TYTHEVVTLWYRAPEILLGXKYY 188
Query: 513 SEKIDVYAFGIVLLELLSGK 532
S +D+++ G + E+++ +
Sbjct: 189 STAVDIWSLGCIFAEMVTRR 208
>pdb|1PF8|A Chain A, Crystal Structure Of Human Cyclin-dependent Kinase 2
Complexed With A Nucleoside Inhibitor
Length = 298
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 53/200 (26%), Positives = 98/200 (49%), Gaps = 15/200 (7%)
Query: 339 VGKGGHSHVY--RGCLPDGKELAVKILK---PSEDVLKEFASEIEIITALHHRNIISLFG 393
+G+G + VY R L G+ +A+K ++ +E V EI ++ L+H NI+ L
Sbjct: 10 IGEGTYGVVYKARNKL-TGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLD 68
Query: 394 FCFEDNNLLLVYDFLSRGSLEENLHGNKKDGNAFGWTERYKVAVGVAEALDYLHNSCEQP 453
+N L LV++FL + L++ + + G + Y + + L + H+
Sbjct: 69 VIHTENKLYLVFEFLHQ-DLKKFMDASALTGIPLPLIKSY--LFQLLQGLAFCHS---HR 122
Query: 454 VIHKDVKSSNILLSDDFEPQLSDFGLASWLSTSSSHLTCTDVAGTFGYLAPEYFMHGK-V 512
V+H+D+K N+L++ + +L+DFGLA T T T Y APE + K
Sbjct: 123 VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVR--TYTHEVVTLWYRAPEILLGCKYY 180
Query: 513 SEKIDVYAFGIVLLELLSGK 532
S +D+++ G + E+++ +
Sbjct: 181 STAVDIWSLGCIFAEMVTRR 200
>pdb|3LZB|A Chain A, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|B Chain B, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|C Chain C, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|D Chain D, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|E Chain E, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|F Chain F, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|G Chain G, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|H Chain H, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
Length = 327
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 47/205 (22%), Positives = 100/205 (48%), Gaps = 15/205 (7%)
Query: 338 LVGKGGHSHVYRGC-LPDGKEL----AVKILK--PSEDVLKEFASEIEIITALHHRNIIS 390
++G G VY+G +P+G+++ A+K L+ S KE E ++ ++ + ++
Sbjct: 22 VLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCR 81
Query: 391 LFGFCFEDNNLLLVYDFLSRGSLEENLHGNKKDGNAFGWTERYKVAVGVAEALDYLHNSC 450
L G C + + L+ + G L + + +K + G V +A+ ++YL +
Sbjct: 82 LLGICL-TSTVQLITQLMPFGCLLDYVREHKDN---IGSQYLLNWCVQIAKGMNYLED-- 135
Query: 451 EQPVIHKDVKSSNILLSDDFEPQLSDFGLASWLSTSSSHLTCTDVAGTFGYLAPEYFMHG 510
+ ++H+D+ + N+L+ +++DFGLA L ++A E +H
Sbjct: 136 -RRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHR 194
Query: 511 KVSEKIDVYAFGIVLLELLS-GKKP 534
+ + DV+++G+ + EL++ G KP
Sbjct: 195 IYTHQSDVWSYGVTVWELMTFGSKP 219
>pdb|1M14|A Chain A, Tyrosine Kinase Domain From Epidermal Growth Factor
Receptor
pdb|1M17|A Chain A, Epidermal Growth Factor Receptor Tyrosine Kinase Domain
With 4-Anilinoquinazoline Inhibitor Erlotinib
Length = 333
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 47/208 (22%), Positives = 101/208 (48%), Gaps = 15/208 (7%)
Query: 338 LVGKGGHSHVYRGC-LPDGKEL----AVKILK--PSEDVLKEFASEIEIITALHHRNIIS 390
++G G VY+G +P+G+++ A+K L+ S KE E ++ ++ + ++
Sbjct: 28 VLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCR 87
Query: 391 LFGFCFEDNNLLLVYDFLSRGSLEENLHGNKKDGNAFGWTERYKVAVGVAEALDYLHNSC 450
L G C + + L+ + G L + + +K + G V +A+ ++YL +
Sbjct: 88 LLGICL-TSTVQLITQLMPFGCLLDYVREHKDN---IGSQYLLNWCVQIAKGMNYLED-- 141
Query: 451 EQPVIHKDVKSSNILLSDDFEPQLSDFGLASWLSTSSSHLTCTDVAGTFGYLAPEYFMHG 510
+ ++H+D+ + N+L+ +++DFGLA L ++A E +H
Sbjct: 142 -RRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHR 200
Query: 511 KVSEKIDVYAFGIVLLELLS-GKKPINS 537
+ + DV+++G+ + EL++ G KP +
Sbjct: 201 IYTHQSDVWSYGVTVWELMTFGSKPYDG 228
>pdb|2P2I|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Nicotinamide Inhibitor
pdb|2P2I|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Nicotinamide Inhibitor
pdb|3EFL|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Motesanib
pdb|3EFL|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Motesanib
Length = 314
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 54/202 (26%), Positives = 96/202 (47%), Gaps = 32/202 (15%)
Query: 356 KELAVKILK--PSEDVLKEFASEIEIITAL-HHRNIISLFGFCFEDNN-LLLVYDFLSRG 411
+ +AVK+LK + + SE++I+ + HH N+++L G C + L+++ +F G
Sbjct: 49 RTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFG 108
Query: 412 SLEENLHGNKKDGNAFGWTERYKVA------------------VGVAEALDYLHNSCEQP 453
+L L + N F YKVA VA+ +++L + +
Sbjct: 109 NLSTYLRSKR---NEF---VPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLAS---RK 159
Query: 454 VIHKDVKSSNILLSDDFEPQLSDFGLASWLSTSSSHLTCTDVAGTFGYLAPEYFMHGKVS 513
IH+D+ + NILLS+ ++ DFGLA + + D ++APE +
Sbjct: 160 CIHRDLAARNILLSEKNVVKICDFGLARDIXKDPDXVRKGDARLPLKWMAPETIFDRVYT 219
Query: 514 EKIDVYAFGIVLLELLS-GKKP 534
+ DV++FG++L E+ S G P
Sbjct: 220 IQSDVWSFGVLLWEIFSLGASP 241
>pdb|2J5E|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With An
Irreversible Inhibitor 13-Jab
Length = 327
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 47/208 (22%), Positives = 101/208 (48%), Gaps = 15/208 (7%)
Query: 338 LVGKGGHSHVYRGC-LPDGKEL----AVKILK--PSEDVLKEFASEIEIITALHHRNIIS 390
++G G VY+G +P+G+++ A+K L+ S KE E ++ ++ + ++
Sbjct: 22 VLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCR 81
Query: 391 LFGFCFEDNNLLLVYDFLSRGSLEENLHGNKKDGNAFGWTERYKVAVGVAEALDYLHNSC 450
L G C + + L+ + G L + + +K + G V +A+ ++YL +
Sbjct: 82 LLGICL-TSTVQLITQLMPFGXLLDYVREHKDN---IGSQYLLNWCVQIAKGMNYLED-- 135
Query: 451 EQPVIHKDVKSSNILLSDDFEPQLSDFGLASWLSTSSSHLTCTDVAGTFGYLAPEYFMHG 510
+ ++H+D+ + N+L+ +++DFGLA L ++A E +H
Sbjct: 136 -RRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHR 194
Query: 511 KVSEKIDVYAFGIVLLELLS-GKKPINS 537
+ + DV+++G+ + EL++ G KP +
Sbjct: 195 IYTHQSDVWSYGVTVWELMTFGSKPYDG 222
>pdb|4I23|A Chain A, Crystal Structure Of The Wild-type Egfr Kinase Domain In
Complex With Dacomitinib (soaked)
Length = 329
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 47/208 (22%), Positives = 101/208 (48%), Gaps = 15/208 (7%)
Query: 338 LVGKGGHSHVYRGC-LPDGKEL----AVKILK--PSEDVLKEFASEIEIITALHHRNIIS 390
++G G VY+G +P+G+++ A+K L+ S KE E ++ ++ + ++
Sbjct: 24 VLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCR 83
Query: 391 LFGFCFEDNNLLLVYDFLSRGSLEENLHGNKKDGNAFGWTERYKVAVGVAEALDYLHNSC 450
L G C + + L+ + G L + + +K + G V +A+ ++YL +
Sbjct: 84 LLGICL-TSTVQLITQLMPFGCLLDYVREHKDN---IGSQYLLNWCVQIAKGMNYLED-- 137
Query: 451 EQPVIHKDVKSSNILLSDDFEPQLSDFGLASWLSTSSSHLTCTDVAGTFGYLAPEYFMHG 510
+ ++H+D+ + N+L+ +++DFGLA L ++A E +H
Sbjct: 138 -RRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHR 196
Query: 511 KVSEKIDVYAFGIVLLELLS-GKKPINS 537
+ + DV+++G+ + EL++ G KP +
Sbjct: 197 IYTHQSDVWSYGVTVWELMTFGSKPYDG 224
>pdb|2GS2|A Chain A, Crystal Structure Of The Active Egfr Kinase Domain
pdb|2GS6|A Chain A, Crystal Structure Of The Active Egfr Kinase Domain In
Complex With An Atp Analog-Peptide Conjugate
pdb|2RF9|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RF9|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|3W2S|A Chain A, Egfr Kinase Domain With Compound4
Length = 330
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 47/208 (22%), Positives = 101/208 (48%), Gaps = 15/208 (7%)
Query: 338 LVGKGGHSHVYRGC-LPDGKEL----AVKILK--PSEDVLKEFASEIEIITALHHRNIIS 390
++G G VY+G +P+G+++ A+K L+ S KE E ++ ++ + ++
Sbjct: 25 VLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCR 84
Query: 391 LFGFCFEDNNLLLVYDFLSRGSLEENLHGNKKDGNAFGWTERYKVAVGVAEALDYLHNSC 450
L G C + + L+ + G L + + +K + G V +A+ ++YL +
Sbjct: 85 LLGICL-TSTVQLITQLMPFGCLLDYVREHKDN---IGSQYLLNWCVQIAKGMNYLED-- 138
Query: 451 EQPVIHKDVKSSNILLSDDFEPQLSDFGLASWLSTSSSHLTCTDVAGTFGYLAPEYFMHG 510
+ ++H+D+ + N+L+ +++DFGLA L ++A E +H
Sbjct: 139 -RRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHR 197
Query: 511 KVSEKIDVYAFGIVLLELLS-GKKPINS 537
+ + DV+++G+ + EL++ G KP +
Sbjct: 198 IYTHQSDVWSYGVTVWELMTFGSKPYDG 225
>pdb|1XKK|A Chain A, Egfr Kinase Domain Complexed With A Quinazoline Inhibitor-
Gw572016
Length = 352
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 47/208 (22%), Positives = 101/208 (48%), Gaps = 15/208 (7%)
Query: 338 LVGKGGHSHVYRGC-LPDGKEL----AVKILK--PSEDVLKEFASEIEIITALHHRNIIS 390
++G G VY+G +P+G+++ A+K L+ S KE E ++ ++ + ++
Sbjct: 47 VLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCR 106
Query: 391 LFGFCFEDNNLLLVYDFLSRGSLEENLHGNKKDGNAFGWTERYKVAVGVAEALDYLHNSC 450
L G C + + L+ + G L + + +K + G V +A+ ++YL +
Sbjct: 107 LLGICL-TSTVQLITQLMPFGCLLDYVREHKDN---IGSQYLLNWCVQIAKGMNYLED-- 160
Query: 451 EQPVIHKDVKSSNILLSDDFEPQLSDFGLASWLSTSSSHLTCTDVAGTFGYLAPEYFMHG 510
+ ++H+D+ + N+L+ +++DFGLA L ++A E +H
Sbjct: 161 -RRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHR 219
Query: 511 KVSEKIDVYAFGIVLLELLS-GKKPINS 537
+ + DV+++G+ + EL++ G KP +
Sbjct: 220 IYTHQSDVWSYGVTVWELMTFGSKPYDG 247
>pdb|4G5J|A Chain A, Crystal Structure Of Egfr Kinase In Complex With Bibw2992
Length = 330
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 47/208 (22%), Positives = 101/208 (48%), Gaps = 15/208 (7%)
Query: 338 LVGKGGHSHVYRGC-LPDGKEL----AVKILK--PSEDVLKEFASEIEIITALHHRNIIS 390
++G G VY+G +P+G+++ A+K L+ S KE E ++ ++ + ++
Sbjct: 25 VLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCR 84
Query: 391 LFGFCFEDNNLLLVYDFLSRGSLEENLHGNKKDGNAFGWTERYKVAVGVAEALDYLHNSC 450
L G C + + L+ + G L + + +K + G V +A+ ++YL +
Sbjct: 85 LLGICL-TSTVQLITQLMPFGCLLDYVREHKDN---IGSQYLLNWCVQIAKGMNYLED-- 138
Query: 451 EQPVIHKDVKSSNILLSDDFEPQLSDFGLASWLSTSSSHLTCTDVAGTFGYLAPEYFMHG 510
+ ++H+D+ + N+L+ +++DFGLA L ++A E +H
Sbjct: 139 -RRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHR 197
Query: 511 KVSEKIDVYAFGIVLLELLS-GKKPINS 537
+ + DV+++G+ + EL++ G KP +
Sbjct: 198 IYTHQSDVWSYGVTVWELMTFGSKPYDG 225
>pdb|2QCS|A Chain A, A Complex Structure Between The Catalytic And Regulatory
Subunit Of Protein Kinase A That Represents The
Inhibited State
pdb|2CPK|E Chain E, Crystal Structure Of The Catalytic Subunit Of Cyclic
Adenosine Monophosphate-Dependent Protein Kinase
pdb|4DG0|E Chain E, Crystal Structure Of Myristoylated Wt Catalytic Subunit Of
Camp- Dependent Protein Kinase In Complex With Sp20 And
Amp-Pnp
pdb|4DG2|E Chain E, Crystal Structure Of Myristoylated Wt Catalytic Subunit Of
Camp- Dependent Protein Kinase In Complex With Sp20
pdb|4DH1|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With Low Mg2+, Atp And Ip20
pdb|4DH3|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Atp And Ip20
pdb|4DH5|A Chain A, Room Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Adp,
Phosphate, And Ip20
pdb|4DH7|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Amp-pnp And
Ip20'
pdb|4DH8|A Chain A, Room Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Amp-pnp And
Ip20
Length = 350
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 52/191 (27%), Positives = 97/191 (50%), Gaps = 18/191 (9%)
Query: 355 GKELAVKILKPSEDV-LKEFA---SEIEIITALHHRNIISLFGFCFEDN-NLLLVYDFLS 409
G A+KIL + V LK+ +E I+ A++ ++ L F F+DN NL +V ++++
Sbjct: 66 GNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKL-EFSFKDNSNLYMVMEYVA 124
Query: 410 RGSLEENLHGNKKDGNAFGWTERYKVAVGVAEALDYLHNSCEQPVIHKDVKSSNILLSDD 469
G + +L ++ G R+ A + +YLH+ +I++D+K N+L+
Sbjct: 125 GGEMFSHL---RRIGRFXEPHARF-YAAQIVLTFEYLHSL---DLIYRDLKPENLLIDQQ 177
Query: 470 FEPQLSDFGLASWLSTSSSHLTCTDVAGTFGYLAPEYFMHGKVSEKIDVYAFGIVLLELL 529
Q++DFG A + + L GT YLAPE + ++ +D +A G+++ E+
Sbjct: 178 GYIQVTDFGFAKRVKGRTWXL-----CGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMA 232
Query: 530 SGKKPINSENP 540
+G P ++ P
Sbjct: 233 AGYPPFFADQP 243
>pdb|1YWN|A Chain A, Vegfr2 In Complex With A Novel
4-amino-furo[2,3-d]pyrimidine
Length = 316
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 54/202 (26%), Positives = 96/202 (47%), Gaps = 32/202 (15%)
Query: 356 KELAVKILK--PSEDVLKEFASEIEIITAL-HHRNIISLFGFCFEDNN-LLLVYDFLSRG 411
+ +AVK+LK + + SE++I+ + HH N+++L G C + L+++ +F G
Sbjct: 58 RTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFG 117
Query: 412 SLEENLHGNKKDGNAFGWTERYKVA------------------VGVAEALDYLHNSCEQP 453
+L L + N F YKVA VA+ +++L + +
Sbjct: 118 NLSTYLRSKR---NEF---VPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLAS---RK 168
Query: 454 VIHKDVKSSNILLSDDFEPQLSDFGLASWLSTSSSHLTCTDVAGTFGYLAPEYFMHGKVS 513
IH+D+ + NILLS+ ++ DFGLA + + D ++APE +
Sbjct: 169 CIHRDLAARNILLSEKNVVKICDFGLARDIXKDPDXVRKGDARLPLKWMAPETIFDRVYT 228
Query: 514 EKIDVYAFGIVLLELLS-GKKP 534
+ DV++FG++L E+ S G P
Sbjct: 229 IQSDVWSFGVLLWEIFSLGASP 250
>pdb|3BEL|A Chain A, X-Ray Structure Of Egfr In Complex With Oxime Inhibitor
pdb|2RGP|A Chain A, Structure Of Egfr In Complex With Hydrazone, A Potent Dual
Inhibitor
Length = 315
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 47/208 (22%), Positives = 101/208 (48%), Gaps = 15/208 (7%)
Query: 338 LVGKGGHSHVYRGC-LPDGKEL----AVKILK--PSEDVLKEFASEIEIITALHHRNIIS 390
++G G VY+G +P+G+++ A+K L+ S KE E ++ ++ + ++
Sbjct: 16 VLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCR 75
Query: 391 LFGFCFEDNNLLLVYDFLSRGSLEENLHGNKKDGNAFGWTERYKVAVGVAEALDYLHNSC 450
L G C + + L+ + G L + + +K + G V +A+ ++YL +
Sbjct: 76 LLGICL-TSTVQLITQLMPFGCLLDYVREHKDN---IGSQYLLNWCVQIAKGMNYLED-- 129
Query: 451 EQPVIHKDVKSSNILLSDDFEPQLSDFGLASWLSTSSSHLTCTDVAGTFGYLAPEYFMHG 510
+ ++H+D+ + N+L+ +++DFGLA L ++A E +H
Sbjct: 130 -RRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHR 188
Query: 511 KVSEKIDVYAFGIVLLELLS-GKKPINS 537
+ + DV+++G+ + EL++ G KP +
Sbjct: 189 IYTHQSDVWSYGVTVWELMTFGSKPYDG 216
>pdb|3PVB|A Chain A, Crystal Structure Of (73-244)ria:c Holoenzyme Of
Camp-Dependent Protein Kinase
Length = 345
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 52/191 (27%), Positives = 97/191 (50%), Gaps = 18/191 (9%)
Query: 355 GKELAVKILKPSEDV-LKEFA---SEIEIITALHHRNIISLFGFCFEDN-NLLLVYDFLS 409
G A+KIL + V LK+ +E I+ A++ ++ L F F+DN NL +V ++++
Sbjct: 61 GNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKL-EFSFKDNSNLYMVMEYVA 119
Query: 410 RGSLEENLHGNKKDGNAFGWTERYKVAVGVAEALDYLHNSCEQPVIHKDVKSSNILLSDD 469
G + +L ++ G R+ A + +YLH+ +I++D+K N+L+
Sbjct: 120 GGEMFSHL---RRIGRFXEPHARF-YAAQIVLTFEYLHSL---DLIYRDLKPENLLIDQQ 172
Query: 470 FEPQLSDFGLASWLSTSSSHLTCTDVAGTFGYLAPEYFMHGKVSEKIDVYAFGIVLLELL 529
Q++DFG A + + L GT YLAPE + ++ +D +A G+++ E+
Sbjct: 173 GYIQVTDFGFAKRVKGRTWXL-----CGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMA 227
Query: 530 SGKKPINSENP 540
+G P ++ P
Sbjct: 228 AGYPPFFADQP 238
>pdb|3PXF|A Chain A, Cdk2 In Complex With Two Molecules Of
8-Anilino-1-Naphthalene Sulfonate
pdb|3PXQ|A Chain A, Cdk2 In Complex With 3 Molecules Of
8-Anilino-1-Naphthalene Sulfonate
pdb|3PXR|A Chain A, Apo Cdk2 Crystallized From Jeffamine
pdb|3PXY|A Chain A, Cdk2 In Complex With Inhibitor Jws648
pdb|3PXZ|A Chain A, Cdk2 Ternary Complex With Jws648 And Ans
pdb|3PY0|A Chain A, Cdk2 In Complex With Inhibitor Su9516
pdb|3PY1|A Chain A, Cdk2 Ternary Complex With Su9516 And Ans
pdb|3QL8|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-260
pdb|3QQF|A Chain A, Cdk2 In Complex With Inhibitor L1
pdb|3QQG|A Chain A, Cdk2 In Complex With Inhibitor L2-5
pdb|3QQH|A Chain A, Cdk2 In Complex With Inhibitor L2-2
pdb|3QQJ|A Chain A, Cdk2 In Complex With Inhibitor L2
pdb|3QQL|A Chain A, Cdk2 In Complex With Inhibitor L3
pdb|3QRT|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc2-55
pdb|3QRU|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc1-12
pdb|3QWJ|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-142
pdb|3QWK|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-150
pdb|3QX2|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-190
pdb|3QX4|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-78
pdb|3QXO|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-84
pdb|3QZF|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-52
pdb|3QZG|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-76
pdb|3QZH|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-124
pdb|3QZI|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-126
pdb|3R1Q|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-102
pdb|3R1S|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-127
pdb|3R1Y|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-134
pdb|3R28|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-140
pdb|3R6X|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-158
pdb|3R71|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-162
pdb|3R73|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-164
pdb|3R7E|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-67
pdb|3R7I|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-74
pdb|3R7U|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-75
pdb|3R7V|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-9
pdb|3R7Y|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-88
pdb|3R83|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-92
pdb|3R8L|A Chain A, Cdk2 In Complex With Inhibitor L3-4
pdb|3R8M|A Chain A, Cdk2 In Complex With Inhibitor L3-3
pdb|3R8P|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc1-6
pdb|3RAI|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-160
pdb|3RM6|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-80
pdb|3RM7|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-91
pdb|3ROY|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-154
pdb|3RPO|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-156
pdb|4EZ3|A Chain A, Cdk2 In Complex With Nsc 134199
pdb|4EZ7|A Chain A, Cdk2 In Complex With Staurosporine And 2 Molecules Of
8-Anilino-1- Naphthalene Sulfonic Acid
pdb|3QQK|A Chain A, Cdk2 In Complex With Inhibitor L4
pdb|3QTQ|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-137
pdb|3QTR|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-148
pdb|3QTS|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-12
pdb|3QTU|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-132
pdb|3QTW|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-13
pdb|3QTX|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-35
pdb|3QTZ|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-36
pdb|3QU0|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-38
pdb|3QXP|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-89
pdb|3R8U|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-132
pdb|3R8V|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-135
pdb|3R8Z|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-136
pdb|3R9D|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-135
pdb|3R9H|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-142
pdb|3R9N|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-21
pdb|3R9O|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-143
pdb|3RAH|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-22
pdb|3RAK|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-32
pdb|3RAL|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-34
pdb|3RJC|A Chain A, Cdk2 In Complex With Inhibitor L4-12
pdb|3RK5|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-72
pdb|3RK7|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-71
pdb|3RK9|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-74
pdb|3RKB|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-73
pdb|3RMF|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-33
pdb|3RNI|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-86
pdb|3RPR|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-49
pdb|3RPV|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-88
pdb|3RPY|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-40
pdb|3RZB|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-23
pdb|3S00|A Chain A, Cdk2 In Complex With Inhibitor L4-14
pdb|3S0O|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-138
pdb|3S1H|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-39
pdb|3SQQ|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-96
pdb|4GCJ|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-89
Length = 306
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 53/200 (26%), Positives = 98/200 (49%), Gaps = 15/200 (7%)
Query: 339 VGKGGHSHVY--RGCLPDGKELAVKILK---PSEDVLKEFASEIEIITALHHRNIISLFG 393
+G+G + VY R L G+ +A+K ++ +E V EI ++ L+H NI+ L
Sbjct: 18 IGEGTYGVVYKARNKL-TGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLD 76
Query: 394 FCFEDNNLLLVYDFLSRGSLEENLHGNKKDGNAFGWTERYKVAVGVAEALDYLHNSCEQP 453
+N L LV++FL + L++ + + G + Y + + L + H+
Sbjct: 77 VIHTENKLYLVFEFLHQ-DLKKFMDASALTGIPLPLIKSY--LFQLLQGLAFCHS---HR 130
Query: 454 VIHKDVKSSNILLSDDFEPQLSDFGLASWLSTSSSHLTCTDVAGTFGYLAPEYFMHGK-V 512
V+H+D+K N+L++ + +L+DFGLA T T T Y APE + K
Sbjct: 131 VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVR--TYTHEVVTLWYRAPEILLGCKYY 188
Query: 513 SEKIDVYAFGIVLLELLSGK 532
S +D+++ G + E+++ +
Sbjct: 189 STAVDIWSLGCIFAEMVTRR 208
>pdb|2P2H|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridinyl-Triazine Inhibitor
pdb|2QU5|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzimidazole Inhibitor
pdb|2QU6|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzoxazole Inhibitor
pdb|2QU6|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzoxazole Inhibitor
pdb|3B8Q|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8Q|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8R|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8R|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|2RL5|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A 2,3-Dihydro-1,4-Benzoxazine Inhibitor
pdb|3BE2|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzamide Inhibitor
pdb|3CP9|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CP9|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CPB|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Bisamide Inhibitor
pdb|3CPB|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Bisamide Inhibitor
pdb|3CPC|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CPC|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3DTW|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzisoxazole Inhibitor
pdb|3DTW|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzisoxazole Inhibitor
Length = 314
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 54/202 (26%), Positives = 96/202 (47%), Gaps = 32/202 (15%)
Query: 356 KELAVKILK--PSEDVLKEFASEIEIITAL-HHRNIISLFGFCFEDNN-LLLVYDFLSRG 411
+ +AVK+LK + + SE++I+ + HH N+++L G C + L+++ +F G
Sbjct: 49 RTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVITEFCKFG 108
Query: 412 SLEENLHGNKKDGNAFGWTERYKVA------------------VGVAEALDYLHNSCEQP 453
+L L + N F YKVA VA+ +++L + +
Sbjct: 109 NLSTYLRSKR---NEF---VPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLAS---RK 159
Query: 454 VIHKDVKSSNILLSDDFEPQLSDFGLASWLSTSSSHLTCTDVAGTFGYLAPEYFMHGKVS 513
IH+D+ + NILLS+ ++ DFGLA + + D ++APE +
Sbjct: 160 CIHRDLAARNILLSEKNVVKICDFGLARDIXKDPDXVRKGDARLPLKWMAPETIFDRVYT 219
Query: 514 EKIDVYAFGIVLLELLS-GKKP 534
+ DV++FG++L E+ S G P
Sbjct: 220 IQSDVWSFGVLLWEIFSLGASP 241
>pdb|3SRV|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase (Syk) In
Complex With A Diaminopyrimidine Carboxamide Inhibitor
Length = 277
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 52/184 (28%), Positives = 84/184 (45%), Gaps = 16/184 (8%)
Query: 372 EFASEIEIITALHHRNIISLFGFCFEDNNLLLVYDFLSRGSLEENLHGNK--KDGNAFGW 429
E +E ++ L + I+ + G C E + +LV + G L + L N+ KD N
Sbjct: 58 ELLAEANVMQQLDNPYIVRMIGIC-EAESWMLVMEMAELGPLNKYLQQNRHVKDKNII-- 114
Query: 430 TERYKVAVGVAEALDYLHNSCEQPVIHKDVKSSNILLSDDFEPQLSDFGLASWLSTSSSH 489
++ V+ + YL E +H+D+ + N+LL ++SDFGL+ L +
Sbjct: 115 ----ELVHQVSMGMKYLE---ESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENX 167
Query: 490 LTC-TDVAGTFGYLAPEYFMHGKVSEKIDVYAFGIVLLELLS-GKKPINSENPKGQESLV 547
T + APE + K S K DV++FG+++ E S G+KP KG E
Sbjct: 168 YKAQTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGM--KGSEVTA 225
Query: 548 MWAK 551
M K
Sbjct: 226 MLEK 229
>pdb|1L3R|E Chain E, Crystal Structure Of A Transition State Mimic Of The
Catalytic Subunit Of Camp-Dependent Protein Kinase
pdb|3TNP|C Chain C, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
pdb|3TNP|F Chain F, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
pdb|3TNQ|B Chain B, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
Length = 350
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 52/191 (27%), Positives = 97/191 (50%), Gaps = 18/191 (9%)
Query: 355 GKELAVKILKPSEDV-LKEFA---SEIEIITALHHRNIISLFGFCFEDN-NLLLVYDFLS 409
G A+KIL + V LK+ +E I+ A++ ++ L F F+DN NL +V ++++
Sbjct: 66 GNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKL-EFSFKDNSNLYMVMEYVA 124
Query: 410 RGSLEENLHGNKKDGNAFGWTERYKVAVGVAEALDYLHNSCEQPVIHKDVKSSNILLSDD 469
G + +L ++ G R+ A + +YLH+ +I++D+K N+L+
Sbjct: 125 GGEMFSHL---RRIGRFXEPHARF-YAAQIVLTFEYLHSL---DLIYRDLKPENLLIDQQ 177
Query: 470 FEPQLSDFGLASWLSTSSSHLTCTDVAGTFGYLAPEYFMHGKVSEKIDVYAFGIVLLELL 529
Q++DFG A + + L GT YLAPE + ++ +D +A G+++ E+
Sbjct: 178 GYIQVTDFGFAKRVKGRTWXL-----CGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMA 232
Query: 530 SGKKPINSENP 540
+G P ++ P
Sbjct: 233 AGYPPFFADQP 243
>pdb|3GOP|A Chain A, Crystal Structure Of The Egf Receptor Juxtamembrane And
Kinase Domains
Length = 361
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 44/208 (21%), Positives = 98/208 (47%), Gaps = 15/208 (7%)
Query: 338 LVGKGGHSHVYRGC-LPDGKELAVKIL------KPSEDVLKEFASEIEIITALHHRNIIS 390
++G G VY+G +P+G+++ + + S KE E ++ ++ + ++
Sbjct: 56 VLGSGAFGTVYKGLWIPEGEKVKIPVAIMELREATSPKANKEILDEAYVMASVDNPHVCR 115
Query: 391 LFGFCFEDNNLLLVYDFLSRGSLEENLHGNKKDGNAFGWTERYKVAVGVAEALDYLHNSC 450
L G C + + L+ + G L + + +K + G V +A+ ++YL +
Sbjct: 116 LLGICL-TSTVQLITQLMPFGCLLDYVREHKDN---IGSQYLLNWCVQIAKGMNYLED-- 169
Query: 451 EQPVIHKDVKSSNILLSDDFEPQLSDFGLASWLSTSSSHLTCTDVAGTFGYLAPEYFMHG 510
+ ++H+D+ + N+L+ +++DFGLA L ++A E +H
Sbjct: 170 -RRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHR 228
Query: 511 KVSEKIDVYAFGIVLLELLS-GKKPINS 537
+ + DV+++G+ + EL++ G KP +
Sbjct: 229 IYTHQSDVWSYGVTVWELMTFGSKPYDG 256
>pdb|4EJN|A Chain A, Crystal Structure Of Autoinhibited Form Of Akt1 In Complex
With N-(4-
(5-(3-Acetamidophenyl)-2-(2-Aminopyridin-3-Yl)-3h-
Imidazo[4,5- B]pyridin-3-Yl)benzyl)-3-Fluorobenzamide
Length = 446
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 52/200 (26%), Positives = 94/200 (47%), Gaps = 15/200 (7%)
Query: 355 GKELAVKILKP----SEDVLKEFASEIEIITALHHRNIISLFGFCFEDNN-LLLVYDFLS 409
G+ A+KILK ++D + +E ++ H + +L + F+ ++ L V ++ +
Sbjct: 173 GRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSRHPFLTAL-KYSFQTHDRLCFVMEYAN 231
Query: 410 RGSLEENLHGNKKDGNAFGWTERYKVAVGVAEALDYLHNSCEQPVIHKDVKSSNILLSDD 469
G L +L + F + ALDYLH+ E+ V+++D+K N++L D
Sbjct: 232 GGELFFHLSRER----VFSEDRARFYGAEIVSALDYLHS--EKNVVYRDLKLENLMLDKD 285
Query: 470 FEPQLSDFGLASWLSTSSSHLTCTDVAGTFGYLAPEYFMHGKVSEKIDVYAFGIVLLELL 529
+++DFGL T GT YLAPE +D + G+V+ E++
Sbjct: 286 GHIKITDFGLCK--EGIKDGATMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMM 343
Query: 530 SGKKPI-NSENPKGQESLVM 548
G+ P N ++ K E ++M
Sbjct: 344 CGRLPFYNQDHEKLFELILM 363
>pdb|2P0C|A Chain A, Catalytic Domain Of The Proto-Oncogene Tyrosine-Protein
Kina
pdb|2P0C|B Chain B, Catalytic Domain Of The Proto-Oncogene Tyrosine-Protein
Kina
pdb|3BRB|A Chain A, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Tyrosine- Protein Kinase Mer In Complex
With Adp
pdb|3BRB|B Chain B, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Tyrosine- Protein Kinase Mer In Complex
With Adp
pdb|3BPR|A Chain A, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|B Chain B, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|C Chain C, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|D Chain D, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3TCP|A Chain A, Crystal Structure Of The Catalytic Domain Of The
Proto-Oncogene Tyrosine-Protein Kinase Mer In Complex
With Inhibitor Unc569
pdb|3TCP|B Chain B, Crystal Structure Of The Catalytic Domain Of The
Proto-Oncogene Tyrosine-Protein Kinase Mer In Complex
With Inhibitor Unc569
Length = 313
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 53/205 (25%), Positives = 93/205 (45%), Gaps = 17/205 (8%)
Query: 338 LVGKGGHSHVYRGCLP--DGKEL--AVKILK---PSEDVLKEFASEIEIITALHHRNIIS 390
++G+G V G L DG L AVK +K S+ ++EF SE + H N+I
Sbjct: 41 ILGEGEFGSVMEGNLKQEDGTSLKVAVKTMKLDNSSQREIEEFLSEAACMKDFSHPNVIR 100
Query: 391 LFGFCFEDNNL-----LLVYDFLSRGSLEENLHGNKKDGNA--FGWTERYKVAVGVAEAL 443
L G C E ++ +++ F+ G L L ++ + K V +A +
Sbjct: 101 LLGVCIEMSSQGIPKPMVILPFMKYGDLHTYLLYSRLETGPKHIPLQTLLKFMVDIALGM 160
Query: 444 DYLHNSCEQPVIHKDVKSSNILLSDDFEPQLSDFGLASWLSTSSSHLTCTDVAGTFGYLA 503
+YL N + +H+D+ + N +L DD ++DFGL+ + + + ++A
Sbjct: 161 EYLSN---RNFLHRDLAARNCMLRDDMTVCVADFGLSKKIYSGDYYRQGRIAKMPVKWIA 217
Query: 504 PEYFMHGKVSEKIDVYAFGIVLLEL 528
E + K DV+AFG+ + E+
Sbjct: 218 IESLADRVYTSKSDVWAFGVTMWEI 242
>pdb|4DG3|E Chain E, Crystal Structure Of R336a Mutant Of Camp-dependent
Protein Kinase With Unphosphorylated Turn Motif
Length = 371
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 53/191 (27%), Positives = 98/191 (51%), Gaps = 18/191 (9%)
Query: 355 GKELAVKILKPSEDV-LKEFA---SEIEIITALHHRNIISLFGFCFEDN-NLLLVYDFLS 409
G A+KIL + V LK+ +E I+ A++ ++ L F F+DN NL +V ++++
Sbjct: 87 GNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKL-EFSFKDNSNLYMVMEYVA 145
Query: 410 RGSLEENLHGNKKDGNAFGWTERYKVAVGVAEALDYLHNSCEQPVIHKDVKSSNILLSDD 469
G + +L ++ G R+ A + +YLH+ +I++D+K N+L+
Sbjct: 146 GGEMFSHL---RRIGRFXEPHARF-YAAQIVLTFEYLHSL---DLIYRDLKPENLLIDQQ 198
Query: 470 FEPQLSDFGLASWLSTSSSHLTCTDVAGTFGYLAPEYFMHGKVSEKIDVYAFGIVLLELL 529
Q++DFG A + + L C GT YLAPE + ++ +D +A G+++ E+
Sbjct: 199 GYIQVTDFGFAKRVKGRTWXL-C----GTPEYLAPEIILSKGYNKAVDWWALGVLIYEMA 253
Query: 530 SGKKPINSENP 540
+G P ++ P
Sbjct: 254 AGYPPFFADQP 264
>pdb|3O96|A Chain A, Crystal Structure Of Human Akt1 With An Allosteric
Inhibitor
Length = 446
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 52/200 (26%), Positives = 94/200 (47%), Gaps = 15/200 (7%)
Query: 355 GKELAVKILKP----SEDVLKEFASEIEIITALHHRNIISLFGFCFEDNN-LLLVYDFLS 409
G+ A+KILK ++D + +E ++ H + +L + F+ ++ L V ++ +
Sbjct: 176 GRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSRHPFLTAL-KYSFQTHDRLCFVMEYAN 234
Query: 410 RGSLEENLHGNKKDGNAFGWTERYKVAVGVAEALDYLHNSCEQPVIHKDVKSSNILLSDD 469
G L +L + F + ALDYLH+ E+ V+++D+K N++L D
Sbjct: 235 GGELFFHLSRER----VFSEDRARFYGAEIVSALDYLHS--EKNVVYRDLKLENLMLDKD 288
Query: 470 FEPQLSDFGLASWLSTSSSHLTCTDVAGTFGYLAPEYFMHGKVSEKIDVYAFGIVLLELL 529
+++DFGL T GT YLAPE +D + G+V+ E++
Sbjct: 289 GHIKITDFGLCK--EGIKDGATMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMM 346
Query: 530 SGKKPI-NSENPKGQESLVM 548
G+ P N ++ K E ++M
Sbjct: 347 CGRLPFYNQDHEKLFELILM 366
>pdb|2GU8|A Chain A, Discovery Of 2-pyrimidyl-5-amidothiophenes As Novel And
Potent Inhibitors For Akt: Synthesis And Sar Studies
Length = 337
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 52/191 (27%), Positives = 98/191 (51%), Gaps = 18/191 (9%)
Query: 355 GKELAVKILKPSEDV-LKEFA---SEIEIITALHHRNIISLFGFCFEDN-NLLLVYDFLS 409
G A+KIL + V LK+ +E I+ A++ ++ L F F+DN NL +V ++++
Sbjct: 53 GNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKL-EFSFKDNSNLYMVMEYVA 111
Query: 410 RGSLEENLHGNKKDGNAFGWTERYKVAVGVAEALDYLHNSCEQPVIHKDVKSSNILLSDD 469
G + +L ++ G R+ A + +YLH+ +I++D+K N+L+ +
Sbjct: 112 GGEMFSHL---RRIGRFSEPHARF-YAAQIVLTFEYLHSL---DLIYRDLKPENLLIDEQ 164
Query: 470 FEPQLSDFGLASWLSTSSSHLTCTDVAGTFGYLAPEYFMHGKVSEKIDVYAFGIVLLELL 529
Q++DFG A + + L GT YLAPE + ++ +D +A G+++ E+
Sbjct: 165 GYIQVTDFGFAKRVKGRTWXL-----CGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMA 219
Query: 530 SGKKPINSENP 540
+G P ++ P
Sbjct: 220 AGYPPFFADQP 230
>pdb|3G0F|A Chain A, Kit Kinase Domain Mutant D816h In Complex With Sunitinib
pdb|3G0F|B Chain B, Kit Kinase Domain Mutant D816h In Complex With Sunitinib
Length = 336
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 55/200 (27%), Positives = 94/200 (47%), Gaps = 31/200 (15%)
Query: 358 LAVKILKPSEDVLKEFA--SEIEIITAL-HHRNIISLFGFCFEDNNLLLVYDFLSRGSLE 414
+AVK+LKPS + + A SE+++++ L +H NI++L G C L++ ++ G L
Sbjct: 79 VAVKMLKPSAHLTEREALMSELKVLSYLGNHMNIVNLLGACTIGGPTLVITEYCCYGDLL 138
Query: 415 ENLHGNKKDGNAFGWTE-------------------RYKVAVGVAEALDYLHNSCEQPVI 455
N K+D T Y+VA G+A + I
Sbjct: 139 -NFLRRKRDSFICSKTSPAIMEDDELALDLEDLLSFSYQVAKGMAFL-------ASKNCI 190
Query: 456 HKDVKSSNILLSDDFEPQLSDFGLASWLSTSSSHLTCTDVAGTFGYLAPEYFMHGKVSEK 515
H+D+ + NILL+ ++ DFGLA + S+++ + ++APE + + +
Sbjct: 191 HRDLAARNILLTHGRITKICDFGLARHIKNDSNYVVKGNARLPVKWMAPESIFNCVYTFE 250
Query: 516 IDVYAFGIVLLELLS-GKKP 534
DV+++GI L EL S G P
Sbjct: 251 SDVWSYGIFLWELFSLGSSP 270
>pdb|1VR2|A Chain A, Human Vascular Endothelial Growth Factor Receptor 2 (Kdr)
Kinase Domain
Length = 316
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 54/202 (26%), Positives = 96/202 (47%), Gaps = 32/202 (15%)
Query: 356 KELAVKILK--PSEDVLKEFASEIEIITAL-HHRNIISLFGFCFEDNN-LLLVYDFLSRG 411
+ +AVK+LK + + SE++I+ + HH N+++L G C + L+++ +F G
Sbjct: 58 RTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFG 117
Query: 412 SLEENLHGNKKDGNAFGWTERYKVA------------------VGVAEALDYLHNSCEQP 453
+L L + N F YKVA VA+ +++L + +
Sbjct: 118 NLSTYLRSKR---NEF---VPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLAS---RK 168
Query: 454 VIHKDVKSSNILLSDDFEPQLSDFGLASWLSTSSSHLTCTDVAGTFGYLAPEYFMHGKVS 513
IH+D+ + NILLS+ ++ DFGLA + + D ++APE +
Sbjct: 169 CIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDXVRKGDARLPLKWMAPETIFDRVYT 228
Query: 514 EKIDVYAFGIVLLELLS-GKKP 534
+ DV++FG++L E+ S G P
Sbjct: 229 IQSDVWSFGVLLWEIFSLGASP 250
>pdb|4DFY|A Chain A, Crystal Structure Of R194a Mutant Of Camp-Dependent
Protein Kinase With Unphosphorylated Activation Loop
pdb|4DFY|E Chain E, Crystal Structure Of R194a Mutant Of Camp-Dependent
Protein Kinase With Unphosphorylated Activation Loop
Length = 371
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 53/191 (27%), Positives = 99/191 (51%), Gaps = 18/191 (9%)
Query: 355 GKELAVKILKPSEDV-LKEFA---SEIEIITALHHRNIISLFGFCFEDN-NLLLVYDFLS 409
G A+KIL + V LK+ +E I+ A++ ++ L F F+DN NL +V ++++
Sbjct: 87 GNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKL-EFSFKDNSNLYMVMEYVA 145
Query: 410 RGSLEENLHGNKKDGNAFGWTERYKVAVGVAEALDYLHNSCEQPVIHKDVKSSNILLSDD 469
G + +L ++ G R+ A + +YLH+ +I++D+K N+L+
Sbjct: 146 GGEMFSHL---RRIGRFSEPHARF-YAAQIVLTFEYLHSL---DLIYRDLKPENLLIDQQ 198
Query: 470 FEPQLSDFGLASWLSTSSSHLTCTDVAGTFGYLAPEYFMHGKVSEKIDVYAFGIVLLELL 529
Q++DFG A + ++ L C GT YLAPE + ++ +D +A G+++ E+
Sbjct: 199 GYIQVTDFGFAKRVKGATWTL-C----GTPEYLAPEIILSKGYNKAVDWWALGVLIYEMA 253
Query: 530 SGKKPINSENP 540
+G P ++ P
Sbjct: 254 AGYPPFFADQP 264
>pdb|1APM|E Chain E, 2.0 Angstrom Refined Crystal Structure Of The Catalytic
Subunit Of Camp-Dependent Protein Kinase Complexed With
A Peptide Inhibitor And Detergent
Length = 350
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 53/191 (27%), Positives = 98/191 (51%), Gaps = 18/191 (9%)
Query: 355 GKELAVKILKPSEDV-LKEFA---SEIEIITALHHRNIISLFGFCFEDN-NLLLVYDFLS 409
G A+KIL + V LK+ +E I+ A++ ++ L F F+DN NL +V ++++
Sbjct: 66 GNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKL-EFSFKDNSNLYMVMEYVA 124
Query: 410 RGSLEENLHGNKKDGNAFGWTERYKVAVGVAEALDYLHNSCEQPVIHKDVKSSNILLSDD 469
G + +L ++ G R+ A + +YLH+ +I++D+K N+L+
Sbjct: 125 GGEMFSHL---RRIGRFAEPHARF-YAAQIVLTFEYLHSL---DLIYRDLKPENLLIDQQ 177
Query: 470 FEPQLSDFGLASWLSTSSSHLTCTDVAGTFGYLAPEYFMHGKVSEKIDVYAFGIVLLELL 529
Q++DFG A + + L C GT YLAPE + ++ +D +A G+++ E+
Sbjct: 178 GYIQVTDFGFAKRVKGRTWXL-C----GTPEYLAPEIILSKGYNKAVDWWALGVLIYEMA 232
Query: 530 SGKKPINSENP 540
+G P ++ P
Sbjct: 233 AGYPPFFADQP 243
>pdb|2QUR|A Chain A, Crystal Structure Of F327aK285P MUTANT OF CAMP-Dependent
Protein Kinase
Length = 350
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 53/191 (27%), Positives = 98/191 (51%), Gaps = 18/191 (9%)
Query: 355 GKELAVKILKPSEDV-LKEFA---SEIEIITALHHRNIISLFGFCFEDN-NLLLVYDFLS 409
G A+KIL + V LK+ +E I+ A++ ++ L F F+DN NL +V ++++
Sbjct: 66 GNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKL-EFSFKDNSNLYMVMEYVA 124
Query: 410 RGSLEENLHGNKKDGNAFGWTERYKVAVGVAEALDYLHNSCEQPVIHKDVKSSNILLSDD 469
G + +L ++ G R+ A + +YLH+ +I++D+K N+L+
Sbjct: 125 GGEMFSHL---RRIGRFSEPHARF-YAAQIVLTFEYLHSL---DLIYRDLKPENLLIDQQ 177
Query: 470 FEPQLSDFGLASWLSTSSSHLTCTDVAGTFGYLAPEYFMHGKVSEKIDVYAFGIVLLELL 529
Q++DFG A + + L C GT YLAPE + ++ +D +A G+++ E+
Sbjct: 178 GYIQVTDFGFAKRVKGRTWXL-C----GTPEYLAPEIILSKGYNKAVDWWALGVLIYEMA 232
Query: 530 SGKKPINSENP 540
+G P ++ P
Sbjct: 233 AGYPPFFADQP 243
>pdb|2W5A|A Chain A, Human Nek2 Kinase Adp-Bound
pdb|2WQO|A Chain A, Structure Of Nek2 Bound To The Aminopyridine Cct241950
pdb|2XK3|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 35
pdb|2XK4|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 17
pdb|2XK6|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 36
pdb|2XK7|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 23
pdb|2XK8|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 15
pdb|2XKC|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 14
pdb|2XKD|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 12
pdb|2XKF|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 2
pdb|2XKE|A Chain A, Structure Of Nek2 Bound To Aminipyrazine Compound 5
pdb|2XNM|A Chain A, Structure Of Nek2 Bound To Cct
pdb|2XNN|A Chain A, Structure Of Nek2 Bound To Cct242430
pdb|2XNO|A Chain A, Structure Of Nek2 Bound To Cct243779
pdb|2XNP|A Chain A, Structure Of Nek2 Bound To Cct244858
pdb|4AFE|A Chain A, Nek2 Bound To Hybrid Compound 21
Length = 279
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 59/234 (25%), Positives = 101/234 (43%), Gaps = 18/234 (7%)
Query: 354 DGKELAVKIL---KPSEDVLKEFASEIEIITALHHRNIISLFGFCFEDNN--LLLVYDFL 408
DGK L K L +E + SE+ ++ L H NI+ + + N L +V ++
Sbjct: 30 DGKILVWKELDYGSMTEAEKQMLVSEVNLLRELKHPNIVRYYDRIIDRTNTTLYIVMEYC 89
Query: 409 SRGSLEENLHGNKKDGNAFGWTERYKVAVGVAEALDYLHNSCE--QPVIHKDVKSSNILL 466
G L + K+ +V + AL H + V+H+D+K +N+ L
Sbjct: 90 EGGDLASVITKGTKERQYLDEEFVLRVMTQLTLALKECHRRSDGGHTVLHRDLKPANVFL 149
Query: 467 SDDFEPQLSDFGLASWLSTSSSHLTCTDVAGTFGYLAPEYFMHGKVSEKIDVYAFGIVLL 526
+L DFGLA L+ +S GT Y++PE +EK D+++ G +L
Sbjct: 150 DGKQNVKLGDFGLARILNHDTSF--AKTFVGTPYYMSPEQMNRMSYNEKSDIWSLGCLLY 207
Query: 527 ELLSGKKPINSENPKGQESLVMWAKPILKDGKVSQLLDPSLDTDYDNDQIERMV 580
EL + P + + K + ++GK ++ P +D N+ I RM+
Sbjct: 208 ELCALMPPFTAFSQKELAGKI-------REGKFRRI--PYRYSDELNEIITRML 252
>pdb|4EOQ|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With Atp
pdb|4EOQ|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With Atp
Length = 301
Score = 60.8 bits (146), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 55/212 (25%), Positives = 101/212 (47%), Gaps = 15/212 (7%)
Query: 327 LSATSNFLPEYLVGKGGHSHVY--RGCLPDGKELAVKILK---PSEDVLKEFASEIEIIT 381
L + NF +G+G + VY R L G+ +A+K ++ +E V EI ++
Sbjct: 2 LGSMENFQKVEKIGEGTYGVVYKARNKL-TGEVVALKKIRLDTETEGVPSTAIREISLLK 60
Query: 382 ALHHRNIISLFGFCFEDNNLLLVYDFLSRGSLEENLHGNKKDGNAFGWTERYKVAVGVAE 441
L+H NI+ L +N L LV++FL + L++ + + G + Y + +
Sbjct: 61 ELNHPNIVKLLDVIHTENKLYLVFEFLHQ-DLKKFMDASALTGIPLPLIKSY--LFQLLQ 117
Query: 442 ALDYLHNSCEQPVIHKDVKSSNILLSDDFEPQLSDFGLASWLSTSSSHLTCTDVAGTFGY 501
L + H+ V+H+D+K N+L++ + +L+DFGLA T T Y
Sbjct: 118 GLAFCHS---HRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVR--TYXHEVVTLWY 172
Query: 502 LAPEYFMHGK-VSEKIDVYAFGIVLLELLSGK 532
APE + K S +D+++ G + E+++ +
Sbjct: 173 RAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 204
>pdb|1OB3|A Chain A, Structure Of P. Falciparum Pfpk5
pdb|1OB3|B Chain B, Structure Of P. Falciparum Pfpk5
pdb|1V0P|A Chain A, Structure Of P. Falciparum Pfpk5-Purvalanol B Ligand
Complex
pdb|1V0P|B Chain B, Structure Of P. Falciparum Pfpk5-Purvalanol B Ligand
Complex
Length = 288
Score = 60.8 bits (146), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 54/199 (27%), Positives = 95/199 (47%), Gaps = 17/199 (8%)
Query: 339 VGKGGHSHVYRGCLPDGKELAVKIL---KPSEDVLKEFASEIEIITALHHRNIISLFGFC 395
+G+G + VY+ G+ A+K + K E + EI I+ L H NI+ L+
Sbjct: 10 IGEGTYGVVYKAQNNYGETFALKKIRLEKEDEGIPSTTIREISILKELKHSNIVKLYDVI 69
Query: 396 FEDNNLLLVYDFLSR--GSLEENLHGNKKDGNAFGWTERYKVAVGVAEALDYLHNSCEQP 453
L+LV++ L + L + G + A + ++ G+A Y H ++
Sbjct: 70 HTKKRLVLVFEHLDQDLKKLLDVCEGGLESVTAKSFL--LQLLNGIA----YCH---DRR 120
Query: 454 VIHKDVKSSNILLSDDFEPQLSDFGLASWLSTSSSHLTCTDVAGTFGYLAPEYFMHG-KV 512
V+H+D+K N+L++ + E +++DFGLA T V T Y AP+ M K
Sbjct: 121 VLHRDLKPQNLLINREGELKIADFGLARAFGIPVRKYTHEIV--TLWYRAPDVLMGSKKY 178
Query: 513 SEKIDVYAFGIVLLELLSG 531
S ID+++ G + E+++G
Sbjct: 179 STTIDIWSVGCIFAEMVNG 197
>pdb|1PKG|A Chain A, Structure Of A C-kit Kinase Product Complex
pdb|1PKG|B Chain B, Structure Of A C-kit Kinase Product Complex
Length = 329
Score = 60.8 bits (146), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 56/200 (28%), Positives = 96/200 (48%), Gaps = 31/200 (15%)
Query: 358 LAVKILKPSEDVLKEFA--SEIEIITAL-HHRNIISLFGFCFEDNNLLLVYDFLSRGSLE 414
+AVK+LKPS + + A SE+++++ L +H NI++L G C L++ ++ G L
Sbjct: 72 VAVKMLKPSAHLTEREALMSELKVLSYLGNHMNIVNLLGACTIGGPTLVITEYCCYGDLL 131
Query: 415 ENLHGNKKDGNAFGWTE-------------------RYKVAVGVAEALDYLHNSCEQPVI 455
N K+D T Y+VA G+A +L + I
Sbjct: 132 -NFLRRKRDSFICSKTSPAIMEDDELALDLEDLLSFSYQVAKGMA----FL---ASKNCI 183
Query: 456 HKDVKSSNILLSDDFEPQLSDFGLASWLSTSSSHLTCTDVAGTFGYLAPEYFMHGKVSEK 515
H+D+ + NILL+ ++ DFGLA + S+++ + ++APE + + +
Sbjct: 184 HRDLAARNILLTHGRITKICDFGLARDIKNDSNYVVKGNARLPVKWMAPESIFNCVYTFE 243
Query: 516 IDVYAFGIVLLELLS-GKKP 534
DV+++GI L EL S G P
Sbjct: 244 SDVWSYGIFLWELFSLGSSP 263
>pdb|1V0O|A Chain A, Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulphonate
Ligand Complex
pdb|1V0O|B Chain B, Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulphonate
Ligand Complex
Length = 288
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 54/199 (27%), Positives = 95/199 (47%), Gaps = 17/199 (8%)
Query: 339 VGKGGHSHVYRGCLPDGKELAVKIL---KPSEDVLKEFASEIEIITALHHRNIISLFGFC 395
+G+G + VY+ G+ A+K + K E + EI I+ L H NI+ L+
Sbjct: 10 IGEGTYGVVYKAQNNYGETFALKKIRLEKEDEGIPSTTIREISILKELKHSNIVKLYDVI 69
Query: 396 FEDNNLLLVYDFLSR--GSLEENLHGNKKDGNAFGWTERYKVAVGVAEALDYLHNSCEQP 453
L+LV++ L + L + G + A + ++ G+A Y H ++
Sbjct: 70 HTKKRLVLVFEHLDQDLKKLLDVCEGGLESVTAKSFL--LQLLNGIA----YCH---DRR 120
Query: 454 VIHKDVKSSNILLSDDFEPQLSDFGLASWLSTSSSHLTCTDVAGTFGYLAPEYFMHG-KV 512
V+H+D+K N+L++ + E +++DFGLA T V T Y AP+ M K
Sbjct: 121 VLHRDLKPQNLLINREGELKIADFGLARAFGIPVRKYTHEVV--TLWYRAPDVLMGSKKY 178
Query: 513 SEKIDVYAFGIVLLELLSG 531
S ID+++ G + E+++G
Sbjct: 179 STTIDIWSVGCIFAEMVNG 197
>pdb|1FMO|E Chain E, Crystal Structure Of A Polyhistidine-Tagged Recombinant
Catalytic Subunit Of Camp-Dependent Protein Kinase
Complexed With The Peptide Inhibitor Pki(5-24) And
Adenosine
pdb|1JLU|E Chain E, Crystal Structure Of The Catalytic Subunit Of
Camp-dependent Protein Kinase Complexed With A
Phosphorylated Substrate Peptide And Detergent
pdb|1RE8|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 2
pdb|1REJ|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 1
pdb|1REK|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 8
pdb|2QVS|E Chain E, Crystal Structure Of Type Iia Holoenzyme Of Camp-Dependent
Protein Kinase
pdb|3FJQ|E Chain E, Crystal Structure Of Camp-Dependent Protein Kinase
Catalytic Subunit Alpha In Complex With Peptide
Inhibitor Pki Alpha (6-25)
pdb|3IDB|A Chain A, Crystal Structure Of (108-268)riib:c Holoenzyme Of Camp-
Dependent Protein Kinase
pdb|3IDC|A Chain A, Crystal Structure Of (102-265)riib:c Holoenzyme Of Camp-
Dependent Protein Kinase
pdb|3O7L|D Chain D, Crystal Structure Of Phospholamban (1-19):pka
C-Subunit:amp-Pnp:mg2+ Complex
pdb|3OW3|A Chain A, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|1ATP|E Chain E, 2.2 Angstrom Refined Crystal Structure Of The Catalytic
Subunit Of Camp-Dependent Protein Kinase Complexed With
Mnatp And A Peptide Inhibitor
pdb|4DIN|A Chain A, Novel Localization And Quaternary Structure Of The Pka Ri
Beta Holoenzyme
Length = 350
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 52/191 (27%), Positives = 97/191 (50%), Gaps = 18/191 (9%)
Query: 355 GKELAVKILKPSEDV-LKEFA---SEIEIITALHHRNIISLFGFCFEDN-NLLLVYDFLS 409
G A+KIL + V LK+ +E I+ A++ ++ L F F+DN NL +V ++++
Sbjct: 66 GNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKL-EFSFKDNSNLYMVMEYVA 124
Query: 410 RGSLEENLHGNKKDGNAFGWTERYKVAVGVAEALDYLHNSCEQPVIHKDVKSSNILLSDD 469
G + +L ++ G R+ A + +YLH+ +I++D+K N+L+
Sbjct: 125 GGEMFSHL---RRIGRFSEPHARF-YAAQIVLTFEYLHSL---DLIYRDLKPENLLIDQQ 177
Query: 470 FEPQLSDFGLASWLSTSSSHLTCTDVAGTFGYLAPEYFMHGKVSEKIDVYAFGIVLLELL 529
Q++DFG A + + L GT YLAPE + ++ +D +A G+++ E+
Sbjct: 178 GYIQVTDFGFAKRVKGRTWXL-----CGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMA 232
Query: 530 SGKKPINSENP 540
+G P ++ P
Sbjct: 233 AGYPPFFADQP 243
>pdb|2QR8|A Chain A, 2.0a X-ray Structure Of C-terminal Kinase Domain Of P90
Ribosomal S6 Kinase 2 (rsk2)
pdb|4D9U|A Chain A, Rsk2 C-Terminal Kinase Domain, (E)-Tert-Butyl
3-(4-Amino-7-(3-
Hydroxypropyl)-5-P-Tolyl-7h-Pyrrolo[2,
3-D]pyrimidin-6-Yl)-2- Cyanoacrylate
pdb|4D9T|A Chain A, Rsk2 C-Terminal Kinase Domain With Inhibitor (E)-Methyl
3-(4-Amino-7-
(3-Hydroxypropyl)-5-P-Tolyl-7h-Pyrrolo[2,
3-D]pyrimidin-6-Yl)-2- Cyanoacrylate
Length = 342
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 57/204 (27%), Positives = 93/204 (45%), Gaps = 20/204 (9%)
Query: 339 VGKGGHSHVYRGCL--PDGKELAVKILKPSEDVLKEFASEIEIITAL-HHRNIISLFGFC 395
+G G +S V + C+ E AVKI+ S+ ++ EIEI+ H NII+L
Sbjct: 30 IGVGSYS-VCKRCIHKATNMEFAVKIIDKSK---RDPTEEIEILLRYGQHPNIITLKDVY 85
Query: 396 FEDNNLLLVYDFLSRGSLEENLHGNKKDGNAFGWTERYKVAVGVAEALDYLHNSCEQPVI 455
+ + +V + + G L + + K F E V + + ++YLH Q V+
Sbjct: 86 DDGKYVYVVTELMKGGELLDKILRQK----FFSEREASAVLFTITKTVEYLH---AQGVV 138
Query: 456 HKDVKSSNILLSDDF-EPQ---LSDFGLASWLSTSSSHLTCTDVAGTFGYLAPEYFMHGK 511
H+D+K SNIL D+ P+ + DFG A L + L F +APE
Sbjct: 139 HRDLKPSNILYVDESGNPESIRICDFGFAKQLRAENGLLMTPCYTANF--VAPEVLERQG 196
Query: 512 VSEKIDVYAFGIVLLELLSGKKPI 535
D+++ G++L +L+G P
Sbjct: 197 YDAACDIWSLGVLLYTMLTGYTPF 220
>pdb|1BKX|A Chain A, A Binary Complex Of The Catalytic Subunit Of
Camp-Dependent Protein Kinase And Adenosine Further
Defines Conformational Flexibility
pdb|1BX6|A Chain A, Crystal Structure Of The Potent Natural Product Inhibitor
Balanol In Complex With The Catalytic Subunit Of Camp-
Dependent Protein Kinase
Length = 350
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 52/191 (27%), Positives = 97/191 (50%), Gaps = 18/191 (9%)
Query: 355 GKELAVKILKPSEDV-LKEFA---SEIEIITALHHRNIISLFGFCFEDN-NLLLVYDFLS 409
G A+KIL + V LK+ +E I+ A++ ++ L F F+DN NL +V ++++
Sbjct: 66 GNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKL-EFSFKDNSNLYMVMEYVA 124
Query: 410 RGSLEENLHGNKKDGNAFGWTERYKVAVGVAEALDYLHNSCEQPVIHKDVKSSNILLSDD 469
G + +L ++ G R+ A + +YLH+ +I++D+K N+L+
Sbjct: 125 GGEMFSHL---RRIGRFSEPHARF-YAAQIVLTFEYLHSL---DLIYRDLKPENLLIDQQ 177
Query: 470 FEPQLSDFGLASWLSTSSSHLTCTDVAGTFGYLAPEYFMHGKVSEKIDVYAFGIVLLELL 529
Q++DFG A + + L GT YLAPE + ++ +D +A G+++ E+
Sbjct: 178 GYIQVTDFGFAKRVKGRTWXL-----CGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMA 232
Query: 530 SGKKPINSENP 540
+G P ++ P
Sbjct: 233 AGYPPFFADQP 243
>pdb|1H1P|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu2058
pdb|1H1P|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu2058
pdb|1H1Q|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6094
pdb|1H1Q|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6094
pdb|1H1R|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6086
pdb|1H1R|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6086
pdb|1H1S|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6102
pdb|1H1S|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6102
pdb|1H24|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH A 9 RESIDUE RECRUITMENT
Peptide From E2f
pdb|1H24|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH A 9 RESIDUE RECRUITMENT
Peptide From E2f
pdb|1H25|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From Retinoblastoma-Associated Protein
pdb|1H25|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From Retinoblastoma-Associated Protein
pdb|1H26|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P53
pdb|1H26|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P53
pdb|1H27|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P27
pdb|1H27|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P27
pdb|1H28|A Chain A, Cdk2/cyclin A In Complex With An 11-residue Recruitment
Peptide From P107
pdb|1H28|C Chain C, Cdk2/cyclin A In Complex With An 11-residue Recruitment
Peptide From P107
pdb|2WMA|A Chain A, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMA|C Chain C, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMB|A Chain A, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMB|C Chain C, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
Length = 303
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 55/212 (25%), Positives = 101/212 (47%), Gaps = 15/212 (7%)
Query: 327 LSATSNFLPEYLVGKGGHSHVY--RGCLPDGKELAVKILK---PSEDVLKEFASEIEIIT 381
L + NF +G+G + VY R L G+ +A+K ++ +E V EI ++
Sbjct: 3 LGSMENFQKVEKIGEGTYGVVYKARNKL-TGEVVALKKIRLDTETEGVPSTAIREISLLK 61
Query: 382 ALHHRNIISLFGFCFEDNNLLLVYDFLSRGSLEENLHGNKKDGNAFGWTERYKVAVGVAE 441
L+H NI+ L +N L LV++FL + L++ + + G + Y + +
Sbjct: 62 ELNHPNIVKLLDVIHTENKLYLVFEFLHQ-DLKKFMDASALTGIPLPLIKSY--LFQLLQ 118
Query: 442 ALDYLHNSCEQPVIHKDVKSSNILLSDDFEPQLSDFGLASWLSTSSSHLTCTDVAGTFGY 501
L + H+ V+H+D+K N+L++ + +L+DFGLA T T Y
Sbjct: 119 GLAFCHS---HRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVR--TYXHEVVTLWY 173
Query: 502 LAPEYFMHGK-VSEKIDVYAFGIVLLELLSGK 532
APE + K S +D+++ G + E+++ +
Sbjct: 174 RAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 205
>pdb|3QAL|E Chain E, Crystal Structure Of Arg280ala Mutant Of Catalytic Subunit
Of Camp- Dependent Protein Kinase
Length = 350
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 53/191 (27%), Positives = 98/191 (51%), Gaps = 18/191 (9%)
Query: 355 GKELAVKILKPSEDV-LKEFA---SEIEIITALHHRNIISLFGFCFEDN-NLLLVYDFLS 409
G A+KIL + V LK+ +E I+ A++ ++ L F F+DN NL +V ++++
Sbjct: 66 GNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKL-EFSFKDNSNLYMVMEYVA 124
Query: 410 RGSLEENLHGNKKDGNAFGWTERYKVAVGVAEALDYLHNSCEQPVIHKDVKSSNILLSDD 469
G + +L ++ G R+ A + +YLH+ +I++D+K N+L+
Sbjct: 125 GGEMFSHL---RRIGRFSEPHARF-YAAQIVLTFEYLHSL---DLIYRDLKPENLLIDQQ 177
Query: 470 FEPQLSDFGLASWLSTSSSHLTCTDVAGTFGYLAPEYFMHGKVSEKIDVYAFGIVLLELL 529
Q++DFG A + + L C GT YLAPE + ++ +D +A G+++ E+
Sbjct: 178 GYIQVTDFGFAKRVKGRTWXL-C----GTPEYLAPEIILSKGYNKAVDWWALGVLIYEMA 232
Query: 530 SGKKPINSENP 540
+G P ++ P
Sbjct: 233 AGYPPFFADQP 243
>pdb|2ERZ|E Chain E, Crystal Structure Of C-amp Dependent Kinase (pka) Bound To
Hydroxyfasudil
Length = 351
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 52/191 (27%), Positives = 97/191 (50%), Gaps = 18/191 (9%)
Query: 355 GKELAVKILKPSEDV-LKEFA---SEIEIITALHHRNIISLFGFCFEDN-NLLLVYDFLS 409
G A+KIL + V LK+ +E I+ A++ ++ L F F+DN NL +V ++++
Sbjct: 67 GNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKL-EFSFKDNSNLYMVMEYVA 125
Query: 410 RGSLEENLHGNKKDGNAFGWTERYKVAVGVAEALDYLHNSCEQPVIHKDVKSSNILLSDD 469
G + +L ++ G R+ A + +YLH+ +I++D+K N+L+
Sbjct: 126 GGEMFSHL---RRIGRFSEPHARF-YAAQIVLTFEYLHSL---DLIYRDLKPENLLIDQQ 178
Query: 470 FEPQLSDFGLASWLSTSSSHLTCTDVAGTFGYLAPEYFMHGKVSEKIDVYAFGIVLLELL 529
Q++DFG A + + L GT YLAPE + ++ +D +A G+++ E+
Sbjct: 179 GYIQVTDFGFAKRVKGRTWXL-----CGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMA 233
Query: 530 SGKKPINSENP 540
+G P ++ P
Sbjct: 234 AGYPPFFADQP 244
>pdb|1V0B|A Chain A, Crystal Structure Of The T198a Mutant Of Pfpk5
pdb|1V0B|B Chain B, Crystal Structure Of The T198a Mutant Of Pfpk5
Length = 288
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 54/199 (27%), Positives = 95/199 (47%), Gaps = 17/199 (8%)
Query: 339 VGKGGHSHVYRGCLPDGKELAVKIL---KPSEDVLKEFASEIEIITALHHRNIISLFGFC 395
+G+G + VY+ G+ A+K + K E + EI I+ L H NI+ L+
Sbjct: 10 IGEGTYGVVYKAQNNYGETFALKKIRLEKEDEGIPSTTIREISILKELKHSNIVKLYDVI 69
Query: 396 FEDNNLLLVYDFLSR--GSLEENLHGNKKDGNAFGWTERYKVAVGVAEALDYLHNSCEQP 453
L+LV++ L + L + G + A + ++ G+A Y H ++
Sbjct: 70 HTKKRLVLVFEHLDQDLKKLLDVCEGGLESVTAKSFL--LQLLNGIA----YCH---DRR 120
Query: 454 VIHKDVKSSNILLSDDFEPQLSDFGLASWLSTSSSHLTCTDVAGTFGYLAPEYFMHG-KV 512
V+H+D+K N+L++ + E +++DFGLA T V T Y AP+ M K
Sbjct: 121 VLHRDLKPQNLLINREGELKIADFGLARAFGIPVRKYTHEVV--TLWYRAPDVLMGSKKY 178
Query: 513 SEKIDVYAFGIVLLELLSG 531
S ID+++ G + E+++G
Sbjct: 179 STTIDIWSVGCIFAEMVNG 197
>pdb|1J3H|A Chain A, Crystal Structure Of Apoenzyme Camp-Dependent Protein
Kinase Catalytic Subunit
pdb|1J3H|B Chain B, Crystal Structure Of Apoenzyme Camp-Dependent Protein
Kinase Catalytic Subunit
Length = 350
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 52/191 (27%), Positives = 97/191 (50%), Gaps = 18/191 (9%)
Query: 355 GKELAVKILKPSEDV-LKEFA---SEIEIITALHHRNIISLFGFCFEDN-NLLLVYDFLS 409
G A+KIL + V LK+ +E I+ A++ ++ L F F+DN NL +V ++++
Sbjct: 66 GNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKL-EFSFKDNSNLYMVMEYVA 124
Query: 410 RGSLEENLHGNKKDGNAFGWTERYKVAVGVAEALDYLHNSCEQPVIHKDVKSSNILLSDD 469
G + +L ++ G R+ A + +YLH+ +I++D+K N+L+
Sbjct: 125 GGEMFSHL---RRIGRFSEPHARF-YAAQIVLTFEYLHSL---DLIYRDLKPENLLIDQQ 177
Query: 470 FEPQLSDFGLASWLSTSSSHLTCTDVAGTFGYLAPEYFMHGKVSEKIDVYAFGIVLLELL 529
Q++DFG A + + L GT YLAPE + ++ +D +A G+++ E+
Sbjct: 178 GYIQVTDFGFAKRVKGRTWXLX-----GTPEYLAPEIILSKGYNKAVDWWALGVLIYEMA 232
Query: 530 SGKKPINSENP 540
+G P ++ P
Sbjct: 233 AGYPPFFADQP 243
>pdb|2JAV|A Chain A, Human Kinase With Pyrrole-Indolinone Ligand
pdb|2W5B|A Chain A, Human Nek2 Kinase Atpgammas-bound
pdb|2W5H|A Chain A, Human Nek2 Kinase Apo
Length = 279
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 59/234 (25%), Positives = 101/234 (43%), Gaps = 18/234 (7%)
Query: 354 DGKELAVKIL---KPSEDVLKEFASEIEIITALHHRNIISLFGFCFEDNN--LLLVYDFL 408
DGK L K L +E + SE+ ++ L H NI+ + + N L +V ++
Sbjct: 30 DGKILVWKELDYGSMTEAEKQMLVSEVNLLRELKHPNIVRYYDRIIDRTNTTLYIVMEYC 89
Query: 409 SRGSLEENLHGNKKDGNAFGWTERYKVAVGVAEALDYLHNSCE--QPVIHKDVKSSNILL 466
G L + K+ +V + AL H + V+H+D+K +N+ L
Sbjct: 90 EGGDLASVITKGTKERQYLDEEFVLRVMTQLTLALKECHRRSDGGHTVLHRDLKPANVFL 149
Query: 467 SDDFEPQLSDFGLASWLSTSSSHLTCTDVAGTFGYLAPEYFMHGKVSEKIDVYAFGIVLL 526
+L DFGLA L+ +S GT Y++PE +EK D+++ G +L
Sbjct: 150 DGKQNVKLGDFGLARILNHDTSF--AKAFVGTPYYMSPEQMNRMSYNEKSDIWSLGCLLY 207
Query: 527 ELLSGKKPINSENPKGQESLVMWAKPILKDGKVSQLLDPSLDTDYDNDQIERMV 580
EL + P + + K + ++GK ++ P +D N+ I RM+
Sbjct: 208 ELCALMPPFTAFSQKELAGKI-------REGKFRRI--PYRYSDELNEIITRML 252
>pdb|1YDT|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H89 Protein
Kinase Inhibitor N-[2-
(4-Bromocinnamylamino)ethyl]-5-Isoquinoline
pdb|1YDR|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H7 Protein
Kinase Inhibitor 1-(5-
Isoquinolinesulfonyl)-2-Methylpiperazine
pdb|1YDS|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H8 Protein
Kinase Inhibitor [n-(2-Methylamino)ethyl]-5-
Isoquinolinesulfonamide
Length = 350
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 53/191 (27%), Positives = 98/191 (51%), Gaps = 18/191 (9%)
Query: 355 GKELAVKILKPSEDV-LKEFA---SEIEIITALHHRNIISLFGFCFEDN-NLLLVYDFLS 409
G A+KIL + V LK+ +E I+ A++ ++ L F F+DN NL +V ++++
Sbjct: 66 GNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKL-EFSFKDNSNLYMVMEYVA 124
Query: 410 RGSLEENLHGNKKDGNAFGWTERYKVAVGVAEALDYLHNSCEQPVIHKDVKSSNILLSDD 469
G + +L ++ G R+ A + +YLH+ +I++D+K N+L+
Sbjct: 125 GGEMFSHL---RRIGRFSEPHARF-YAAQIVLTFEYLHSL---DLIYRDLKPENLLIDQQ 177
Query: 470 FEPQLSDFGLASWLSTSSSHLTCTDVAGTFGYLAPEYFMHGKVSEKIDVYAFGIVLLELL 529
Q++DFG A + + L C GT YLAPE + ++ +D +A G+++ E+
Sbjct: 178 GYIQVTDFGFAKRVKGRTWXL-C----GTPEYLAPEIILSKGYNKAVDWWALGVLIYEMA 232
Query: 530 SGKKPINSENP 540
+G P ++ P
Sbjct: 233 AGYPPFFADQP 243
>pdb|1JBP|E Chain E, Crystal Structure Of The Catalytic Subunit Of Camp-
Dependent Protein Kinase Complexed With A Substrate
Peptide, Adp And Detergent
Length = 350
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 52/191 (27%), Positives = 97/191 (50%), Gaps = 18/191 (9%)
Query: 355 GKELAVKILKPSEDV-LKEFA---SEIEIITALHHRNIISLFGFCFEDN-NLLLVYDFLS 409
G A+KIL + V LK+ +E I+ A++ ++ L F F+DN NL +V ++++
Sbjct: 66 GNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKL-EFSFKDNSNLYMVMEYVA 124
Query: 410 RGSLEENLHGNKKDGNAFGWTERYKVAVGVAEALDYLHNSCEQPVIHKDVKSSNILLSDD 469
G + +L ++ G R+ A + +YLH+ +I++D+K N+L+
Sbjct: 125 GGEMFSHL---RRIGRFSEPHARF-YAAQIVLTFEYLHSL---DLIYRDLKPENLLIDQQ 177
Query: 470 FEPQLSDFGLASWLSTSSSHLTCTDVAGTFGYLAPEYFMHGKVSEKIDVYAFGIVLLELL 529
Q++DFG A + + L GT YLAPE + ++ +D +A G+++ E+
Sbjct: 178 GYIQVTDFGFAKRVKGRTWXL-----CGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMA 232
Query: 530 SGKKPINSENP 540
+G P ++ P
Sbjct: 233 AGYPPFFADEP 243
>pdb|4EON|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With The Inhibitor Ro3306
pdb|4EON|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With The Inhibitor Ro3306
Length = 300
Score = 60.1 bits (144), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 53/200 (26%), Positives = 97/200 (48%), Gaps = 15/200 (7%)
Query: 339 VGKGGHSHVY--RGCLPDGKELAVKILK---PSEDVLKEFASEIEIITALHHRNIISLFG 393
+G+G + VY R L G+ +A+K ++ +E V EI ++ L+H NI+ L
Sbjct: 12 IGEGTYGVVYKARNKL-TGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLD 70
Query: 394 FCFEDNNLLLVYDFLSRGSLEENLHGNKKDGNAFGWTERYKVAVGVAEALDYLHNSCEQP 453
+N L LV++FLS L++ + + G + Y + + L + H+
Sbjct: 71 VIHTENKLYLVFEFLSM-DLKKFMDASALTGIPLPLIKSY--LFQLLQGLAFCHS---HR 124
Query: 454 VIHKDVKSSNILLSDDFEPQLSDFGLASWLSTSSSHLTCTDVAGTFGYLAPEYFMHGK-V 512
V+H+D+K N+L++ + +L+DFGLA T T Y APE + K
Sbjct: 125 VLHRDLKPENLLINTEGAIKLADFGLARAFGVPVR--TYXHEVVTLWYRAPEILLGCKYY 182
Query: 513 SEKIDVYAFGIVLLELLSGK 532
S +D+++ G + E+++ +
Sbjct: 183 STAVDIWSLGCIFAEMVTRR 202
>pdb|1Q8W|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase In
Complex With Rho-Kinase Inhibitor Fasudil (Ha-1077)
pdb|1XH4|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|3BWJ|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Lead Compound Arc-1034
pdb|3KKV|A Chain A, Structure Of Pka With A Protein Kinase B-Selective
Inhibitor
Length = 350
Score = 60.1 bits (144), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 52/191 (27%), Positives = 96/191 (50%), Gaps = 18/191 (9%)
Query: 355 GKELAVKILKPSEDV-LKEFA---SEIEIITALHHRNIISLFGFCFEDN-NLLLVYDFLS 409
G A+KIL + V LK+ +E I+ A++ ++ L F F+DN NL +V +++
Sbjct: 66 GNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKL-EFSFKDNSNLYMVMEYVP 124
Query: 410 RGSLEENLHGNKKDGNAFGWTERYKVAVGVAEALDYLHNSCEQPVIHKDVKSSNILLSDD 469
G + +L ++ G R+ A + +YLH+ +I++D+K N+L+
Sbjct: 125 GGEMFSHL---RRIGRFXEPHARF-YAAQIVLTFEYLHSL---DLIYRDLKPENLLIDQQ 177
Query: 470 FEPQLSDFGLASWLSTSSSHLTCTDVAGTFGYLAPEYFMHGKVSEKIDVYAFGIVLLELL 529
Q++DFG A + + L GT YLAPE + ++ +D +A G+++ E+
Sbjct: 178 GYIQVTDFGFAKRVKGRTWXL-----CGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMA 232
Query: 530 SGKKPINSENP 540
+G P ++ P
Sbjct: 233 AGYPPFFADQP 243
>pdb|4AE9|A Chain A, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit C Alpha 2
pdb|4AE9|B Chain B, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit C Alpha 2
Length = 343
Score = 60.1 bits (144), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 52/191 (27%), Positives = 96/191 (50%), Gaps = 18/191 (9%)
Query: 355 GKELAVKILKPSEDV-LKEFA---SEIEIITALHHRNIISLFGFCFEDN-NLLLVYDFLS 409
G A+KIL + V LK+ +E I+ A++ ++ L F F+DN NL +V +++
Sbjct: 59 GNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKL-EFSFKDNSNLYMVMEYVP 117
Query: 410 RGSLEENLHGNKKDGNAFGWTERYKVAVGVAEALDYLHNSCEQPVIHKDVKSSNILLSDD 469
G + +L ++ G R+ A + +YLH+ +I++D+K N+L+
Sbjct: 118 GGEMFSHL---RRIGRFXEPHARF-YAAQIVLTFEYLHSL---DLIYRDLKPENLLIDQQ 170
Query: 470 FEPQLSDFGLASWLSTSSSHLTCTDVAGTFGYLAPEYFMHGKVSEKIDVYAFGIVLLELL 529
Q++DFG A + + L GT YLAPE + ++ +D +A G+++ E+
Sbjct: 171 GYIQVTDFGFAKRVKGRTWXL-----CGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMA 225
Query: 530 SGKKPINSENP 540
+G P ++ P
Sbjct: 226 AGYPPFFADQP 236
>pdb|3CQU|A Chain A, Crystal Structure Of Akt-1 Complexed With Substrate
Peptide And Inhibitor
pdb|3CQW|A Chain A, Crystal Structure Of Akt-1 Complexed With Substrate
Peptide And Inhibitor
pdb|3MV5|A Chain A, Crystal Structure Of Akt-1-Inhibitor Complexes
pdb|3MVH|A Chain A, Crystal Structure Of Akt-1-Inhibitor Complexes
Length = 342
Score = 60.1 bits (144), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 52/200 (26%), Positives = 94/200 (47%), Gaps = 15/200 (7%)
Query: 355 GKELAVKILKP----SEDVLKEFASEIEIITALHHRNIISLFGFCFEDNN-LLLVYDFLS 409
G+ A+KILK ++D + +E ++ H + +L + F+ ++ L V ++ +
Sbjct: 35 GRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSRHPFLTAL-KYSFQTHDRLCFVMEYAN 93
Query: 410 RGSLEENLHGNKKDGNAFGWTERYKVAVGVAEALDYLHNSCEQPVIHKDVKSSNILLSDD 469
G L +L + F + ALDYLH+ E+ V+++D+K N++L D
Sbjct: 94 GGELFFHLSRER----VFSEDRARFYGAEIVSALDYLHS--EKNVVYRDLKLENLMLDKD 147
Query: 470 FEPQLSDFGLASWLSTSSSHLTCTDVAGTFGYLAPEYFMHGKVSEKIDVYAFGIVLLELL 529
+++DFGL T GT YLAPE +D + G+V+ E++
Sbjct: 148 GHIKITDFGLCK--EGIKDGATMKXFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMM 205
Query: 530 SGKKPI-NSENPKGQESLVM 548
G+ P N ++ K E ++M
Sbjct: 206 CGRLPFYNQDHEKLFELILM 225
>pdb|2JDS|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
A- 443654
Length = 351
Score = 60.1 bits (144), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 52/191 (27%), Positives = 96/191 (50%), Gaps = 18/191 (9%)
Query: 355 GKELAVKILKPSEDV-LKEFA---SEIEIITALHHRNIISLFGFCFEDN-NLLLVYDFLS 409
G A+KIL + V LK+ +E I+ A++ ++ L F F+DN NL +V +++
Sbjct: 67 GNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKL-EFSFKDNSNLYMVMEYVP 125
Query: 410 RGSLEENLHGNKKDGNAFGWTERYKVAVGVAEALDYLHNSCEQPVIHKDVKSSNILLSDD 469
G + +L ++ G R+ A + +YLH+ +I++D+K N+L+
Sbjct: 126 GGEMFSHL---RRIGRFXEPHARF-YAAQIVLTFEYLHSL---DLIYRDLKPENLLIDQQ 178
Query: 470 FEPQLSDFGLASWLSTSSSHLTCTDVAGTFGYLAPEYFMHGKVSEKIDVYAFGIVLLELL 529
Q++DFG A + + L GT YLAPE + ++ +D +A G+++ E+
Sbjct: 179 GYIQVTDFGFAKRVKGRTWXL-----CGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMA 233
Query: 530 SGKKPINSENP 540
+G P ++ P
Sbjct: 234 AGYPPFFADQP 244
>pdb|4GV1|A Chain A, Pkb Alpha In Complex With Azd5363
Length = 340
Score = 60.1 bits (144), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 52/200 (26%), Positives = 94/200 (47%), Gaps = 15/200 (7%)
Query: 355 GKELAVKILKP----SEDVLKEFASEIEIITALHHRNIISLFGFCFEDNN-LLLVYDFLS 409
G+ A+KILK ++D + +E ++ H + +L + F+ ++ L V ++ +
Sbjct: 33 GRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSRHPFLTAL-KYSFQTHDRLCFVMEYAN 91
Query: 410 RGSLEENLHGNKKDGNAFGWTERYKVAVGVAEALDYLHNSCEQPVIHKDVKSSNILLSDD 469
G L +L + F + ALDYLH+ E+ V+++D+K N++L D
Sbjct: 92 GGELFFHLSRER----VFSEDRARFYGAEIVSALDYLHS--EKNVVYRDLKLENLMLDKD 145
Query: 470 FEPQLSDFGLASWLSTSSSHLTCTDVAGTFGYLAPEYFMHGKVSEKIDVYAFGIVLLELL 529
+++DFGL T GT YLAPE +D + G+V+ E++
Sbjct: 146 GHIKITDFGLCK--EGIKDGATMKXFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMM 203
Query: 530 SGKKPI-NSENPKGQESLVM 548
G+ P N ++ K E ++M
Sbjct: 204 CGRLPFYNQDHEKLFELILM 223
>pdb|1SMH|A Chain A, Protein Kinase A Variant Complex With Completely Ordered
N- Terminal Helix
pdb|1XHA|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 60.1 bits (144), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 54/191 (28%), Positives = 97/191 (50%), Gaps = 18/191 (9%)
Query: 355 GKELAVKILKPSEDV-LKEFA---SEIEIITALHHRNIISLFGFCFEDN-NLLLVYDFLS 409
G A+KIL + V LKE +E I+ A++ ++ L F F+DN NL +V ++
Sbjct: 66 GNHYAMKILDKQKVVKLKEIEHTLNEKRILQAVNFPFLVKL-EFSFKDNSNLYMVMEYAP 124
Query: 410 RGSLEENLHGNKKDGNAFGWTERYKVAVGVAEALDYLHNSCEQPVIHKDVKSSNILLSDD 469
G + +L ++ G R+ A + +YLH+ +I++D+K N+++
Sbjct: 125 GGEMFSHL---RRIGRFSEPHARF-YAAQIVLTFEYLHSL---DLIYRDLKPENLMIDQQ 177
Query: 470 FEPQLSDFGLASWLSTSSSHLTCTDVAGTFGYLAPEYFMHGKVSEKIDVYAFGIVLLELL 529
Q++DFGLA + + L C GT YLAPE + ++ +D +A G+++ E+
Sbjct: 178 GYIQVTDFGLAKRVKGRTWXL-C----GTPEYLAPEIILSKGYNKAVDWWALGVLIYEMA 232
Query: 530 SGKKPINSENP 540
+G P ++ P
Sbjct: 233 AGYPPFFADQP 243
>pdb|3F3Z|A Chain A, Crystal Structure Of Cryptosporidium Parvum Calcium
Dependent Protein Kinase Cgd7_1840 In Presence Of
Indirubin E804
Length = 277
Score = 60.1 bits (144), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 55/186 (29%), Positives = 88/186 (47%), Gaps = 16/186 (8%)
Query: 356 KELAVKILKPSEDVLKEFASEIEIITALHHRNIISLFGFCFEDN-NLLLVYDFLSRGSLE 414
+ A KI K + + F EIEI+ +L H NII L+ FEDN ++ LV + + G L
Sbjct: 36 RRAAKKIPKYFVEDVDRFKQEIEIMKSLDHPNIIRLYE-TFEDNTDIYLVMELCTGGELF 94
Query: 415 ENLHGNKKDGNAFGWTERYKVAVGVAEALDYLHNSCEQPVIHKDVKSSNILL---SDDFE 471
E + + F ++ ++ V A+ Y H V H+D+K N L S D
Sbjct: 95 ERVVHKR----VFRESDAARIMKDVLSAVAYCHKLN---VAHRDLKPENFLFLTDSPDSP 147
Query: 472 PQLSDFGLASWLSTSSSHLTCTDVAGTFGYLAPEYFMHGKVSEKIDVYAFGIVLLELLSG 531
+L DFGLA+ T GT Y++P+ + G + D ++ G+++ LL G
Sbjct: 148 LKLIDFGLAARFKPGKMMRT---KVGTPYYVSPQ-VLEGLYGPECDEWSAGVMMYVLLCG 203
Query: 532 KKPINS 537
P ++
Sbjct: 204 YPPFSA 209
>pdb|2CLQ|A Chain A, Structure Of Mitogen-Activated Protein Kinase Kinase
Kinase 5
pdb|2CLQ|B Chain B, Structure Of Mitogen-Activated Protein Kinase Kinase
Kinase 5
Length = 295
Score = 60.1 bits (144), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 55/209 (26%), Positives = 99/209 (47%), Gaps = 23/209 (11%)
Query: 338 LVGKGGHSHVYRGC-LPDGKELAVKILKPSED--VLKEFASEIEIITALHHRNIISLFGF 394
++GKG + VY G L + +A+K + P D + EI + L H+NI+ G
Sbjct: 29 VLGKGTYGIVYAGRDLSNQVRIAIKEI-PERDSRYSQPLHEEIALHKHLKHKNIVQYLGS 87
Query: 395 CFEDNNLLLVYDFLSRGSLEENLHGN----KKDGNAFGWTERYKVAVGVAEALDYLHNSC 450
E+ + + + + GSL L K + G+ + + E L YLH++
Sbjct: 88 FSENGFIKIFMEQVPGGSLSALLRSKWGPLKDNEQTIGFYTKQ-----ILEGLKYLHDN- 141
Query: 451 EQPVIHKDVKSSNILLSD-DFEPQLSDFGLASWLSTSSSHLTCTDV-AGTFGYLAPEYFM 508
++H+D+K N+L++ ++SDFG + L+ + CT+ GT Y+APE
Sbjct: 142 --QIVHRDIKGDNVLINTYSGVLKISDFGTSKRLAGINP---CTETFTGTLQYMAPEIID 196
Query: 509 HGK--VSEKIDVYAFGIVLLELLSGKKPI 535
G + D+++ G ++E+ +GK P
Sbjct: 197 KGPRGYGKAADIWSLGCTIIEMATGKPPF 225
>pdb|3OCB|A Chain A, Akt1 Kinase Domain With Pyrrolopyrimidine Inhibitor
pdb|3OCB|B Chain B, Akt1 Kinase Domain With Pyrrolopyrimidine Inhibitor
pdb|3OW4|A Chain A, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|3OW4|B Chain B, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|3QKK|A Chain A, Spirochromane Akt Inhibitors
pdb|3QKL|A Chain A, Spirochromane Akt Inhibitors
pdb|3QKM|A Chain A, Spirocyclic Sulfonamides As Akt Inhibitors
pdb|4EKK|A Chain A, Akt1 With Amp-Pnp
pdb|4EKK|B Chain B, Akt1 With Amp-Pnp
pdb|4EKL|A Chain A, Akt1 With Gdc0068
Length = 341
Score = 60.1 bits (144), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 52/200 (26%), Positives = 94/200 (47%), Gaps = 15/200 (7%)
Query: 355 GKELAVKILKP----SEDVLKEFASEIEIITALHHRNIISLFGFCFEDNN-LLLVYDFLS 409
G+ A+KILK ++D + +E ++ H + +L + F+ ++ L V ++ +
Sbjct: 34 GRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSRHPFLTAL-KYSFQTHDRLCFVMEYAN 92
Query: 410 RGSLEENLHGNKKDGNAFGWTERYKVAVGVAEALDYLHNSCEQPVIHKDVKSSNILLSDD 469
G L +L + F + ALDYLH+ E+ V+++D+K N++L D
Sbjct: 93 GGELFFHLSRER----VFSEDRARFYGAEIVSALDYLHS--EKNVVYRDLKLENLMLDKD 146
Query: 470 FEPQLSDFGLASWLSTSSSHLTCTDVAGTFGYLAPEYFMHGKVSEKIDVYAFGIVLLELL 529
+++DFGL T GT YLAPE +D + G+V+ E++
Sbjct: 147 GHIKITDFGLCK--EGIKDGATMKXFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMM 204
Query: 530 SGKKPI-NSENPKGQESLVM 548
G+ P N ++ K E ++M
Sbjct: 205 CGRLPFYNQDHEKLFELILM 224
>pdb|1T45|A Chain A, Structural Basis For The Autoinhibition And Sti-571
Inhibition Of C- Kit Tyrosine Kinase
Length = 331
Score = 60.1 bits (144), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 56/200 (28%), Positives = 96/200 (48%), Gaps = 31/200 (15%)
Query: 358 LAVKILKPSEDVLKEFA--SEIEIITAL-HHRNIISLFGFCFEDNNLLLVYDFLSRGSLE 414
+AVK+LKPS + + A SE+++++ L +H NI++L G C L++ ++ G L
Sbjct: 74 VAVKMLKPSAHLTEREALMSELKVLSYLGNHMNIVNLLGACTIGGPTLVITEYCCYGDLL 133
Query: 415 ENLHGNKKDGNAFGWTE-------------------RYKVAVGVAEALDYLHNSCEQPVI 455
N K+D T Y+VA G+A +L + I
Sbjct: 134 -NFLRRKRDSFICSKTSPAIMEDDELALDLEDLLSFSYQVAKGMA----FL---ASKNCI 185
Query: 456 HKDVKSSNILLSDDFEPQLSDFGLASWLSTSSSHLTCTDVAGTFGYLAPEYFMHGKVSEK 515
H+D+ + NILL+ ++ DFGLA + S+++ + ++APE + + +
Sbjct: 186 HRDLAARNILLTHGRITKICDFGLARDIKNDSNYVVKGNARLPVKWMAPESIFNCVYTFE 245
Query: 516 IDVYAFGIVLLELLS-GKKP 534
DV+++GI L EL S G P
Sbjct: 246 SDVWSYGIFLWELFSLGSSP 265
>pdb|1XH7|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 60.1 bits (144), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 52/191 (27%), Positives = 96/191 (50%), Gaps = 18/191 (9%)
Query: 355 GKELAVKILKPSEDV-LKEFA---SEIEIITALHHRNIISLFGFCFEDN-NLLLVYDFLS 409
G A+KIL + V LK+ +E I+ A++ ++ L F F+DN NL +V +++
Sbjct: 66 GNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKL-EFSFKDNSNLYMVMEYVP 124
Query: 410 RGSLEENLHGNKKDGNAFGWTERYKVAVGVAEALDYLHNSCEQPVIHKDVKSSNILLSDD 469
G + +L ++ G R+ A + +YLH+ +I++D+K N+L+
Sbjct: 125 GGEMFSHL---RRIGRFXEPHARF-YAAQIVLTFEYLHSL---DLIYRDLKPENLLIDQQ 177
Query: 470 FEPQLSDFGLASWLSTSSSHLTCTDVAGTFGYLAPEYFMHGKVSEKIDVYAFGIVLLELL 529
Q++DFG A + + L GT YLAPE + ++ +D +A G+++ E+
Sbjct: 178 GYIQVTDFGFAKRVKGRTWXL-----CGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMA 232
Query: 530 SGKKPINSENP 540
+G P ++ P
Sbjct: 233 AGYPPFFADQP 243
>pdb|3H4J|B Chain B, Crystal Structure Of Pombe Ampk Kdaid Fragment
pdb|3H4J|A Chain A, Crystal Structure Of Pombe Ampk Kdaid Fragment
Length = 336
Score = 60.1 bits (144), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 50/185 (27%), Positives = 97/185 (52%), Gaps = 15/185 (8%)
Query: 356 KELAVKILKPSEDVLKEFASEIEIITALHHRNIISLFGFCFEDNNLLLVYDFLSRGSLEE 415
K ++ ++LK S D+ EI + L H +II L+ ++++V ++ + G L +
Sbjct: 40 KFISRQLLKKS-DMHMRVEREISYLKLLRHPHIIKLYDVITTPTDIVMVIEY-AGGELFD 97
Query: 416 NLHGNKKDGNAFGWTERYKVAVGVAEALDYLHNSCEQPVIHKDVKSSNILLSDDFEPQLS 475
+ K+ E + + A++Y H ++H+D+K N+LL D+ +++
Sbjct: 98 YIVEKKR----MTEDEGRRFFQQIICAIEYCH---RHKIVHRDLKPENLLLDDNLNVKIA 150
Query: 476 DFGLASWLSTSSSHLTCTDVAGTFGYLAPEYFMHGKV--SEKIDVYAFGIVLLELLSGKK 533
DFGL++ + T + L + G+ Y APE ++GK+ ++DV++ GIVL +L G+
Sbjct: 151 DFGLSN-IMTDGNFLKTS--CGSPNYAAPE-VINGKLYAGPEVDVWSCGIVLYVMLVGRL 206
Query: 534 PINSE 538
P + E
Sbjct: 207 PFDDE 211
>pdb|3G0E|A Chain A, Kit Kinase Domain In Complex With Sunitinib
Length = 336
Score = 60.1 bits (144), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 56/200 (28%), Positives = 96/200 (48%), Gaps = 31/200 (15%)
Query: 358 LAVKILKPSEDVLKEFA--SEIEIITAL-HHRNIISLFGFCFEDNNLLLVYDFLSRGSLE 414
+AVK+LKPS + + A SE+++++ L +H NI++L G C L++ ++ G L
Sbjct: 79 VAVKMLKPSAHLTEREALMSELKVLSYLGNHMNIVNLLGACTIGGPTLVITEYCCYGDLL 138
Query: 415 ENLHGNKKDGNAFGWTE-------------------RYKVAVGVAEALDYLHNSCEQPVI 455
N K+D T Y+VA G+A +L + I
Sbjct: 139 -NFLRRKRDSFICSKTSPAIMEDDELALDLEDLLSFSYQVAKGMA----FL---ASKNCI 190
Query: 456 HKDVKSSNILLSDDFEPQLSDFGLASWLSTSSSHLTCTDVAGTFGYLAPEYFMHGKVSEK 515
H+D+ + NILL+ ++ DFGLA + S+++ + ++APE + + +
Sbjct: 191 HRDLAARNILLTHGRITKICDFGLARDIKNDSNYVVKGNARLPVKWMAPESIFNCVYTFE 250
Query: 516 IDVYAFGIVLLELLS-GKKP 534
DV+++GI L EL S G P
Sbjct: 251 SDVWSYGIFLWELFSLGSSP 270
>pdb|1T46|A Chain A, Structural Basis For The Autoinhibition And Sti-571
Inhibition Of C-kit Tyrosine Kinase
Length = 313
Score = 60.1 bits (144), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 56/200 (28%), Positives = 96/200 (48%), Gaps = 31/200 (15%)
Query: 358 LAVKILKPSEDVLKEFA--SEIEIITAL-HHRNIISLFGFCFEDNNLLLVYDFLSRGSLE 414
+AVK+LKPS + + A SE+++++ L +H NI++L G C L++ ++ G L
Sbjct: 56 VAVKMLKPSAHLTEREALMSELKVLSYLGNHMNIVNLLGACTIGGPTLVITEYCCYGDLL 115
Query: 415 ENLHGNKKDGNAFGWTE-------------------RYKVAVGVAEALDYLHNSCEQPVI 455
N K+D T Y+VA G+A +L + I
Sbjct: 116 -NFLRRKRDSFICSKTSPAIMEDDELALDLEDLLSFSYQVAKGMA----FL---ASKNCI 167
Query: 456 HKDVKSSNILLSDDFEPQLSDFGLASWLSTSSSHLTCTDVAGTFGYLAPEYFMHGKVSEK 515
H+D+ + NILL+ ++ DFGLA + S+++ + ++APE + + +
Sbjct: 168 HRDLAARNILLTHGRITKICDFGLARDIKNDSNYVVKGNARLPVKWMAPESIFNCVYTFE 227
Query: 516 IDVYAFGIVLLELLS-GKKP 534
DV+++GI L EL S G P
Sbjct: 228 SDVWSYGIFLWELFSLGSSP 247
>pdb|1OIR|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-Dependent Kinase Inhibitors Identified Through
Structure-Based Hybridisation
Length = 299
Score = 60.1 bits (144), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 49/199 (24%), Positives = 94/199 (47%), Gaps = 13/199 (6%)
Query: 339 VGKGGHSHVYRGCLPDGKELA----VKILKPSEDVLKEFASEIEIITALHHRNIISLFGF 394
+G+G + VY+ E+ +++ +E V EI ++ L+H NI+ L
Sbjct: 11 IGEGTYGVVYKARNKLTGEVVALXKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDV 70
Query: 395 CFEDNNLLLVYDFLSRGSLEENLHGNKKDGNAFGWTERYKVAVGVAEALDYLHNSCEQPV 454
+N L LV++FL + L++ + + G + Y + + L + H+ V
Sbjct: 71 IHTENKLYLVFEFLHQ-DLKKFMDASALTGIPLPLIKSY--LFQLLQGLAFCHS---HRV 124
Query: 455 IHKDVKSSNILLSDDFEPQLSDFGLASWLSTSSSHLTCTDVAGTFGYLAPEYFMHGK-VS 513
+H+D+K N+L++ + +L+DFGLA T T T Y APE + K S
Sbjct: 125 LHRDLKPQNLLINTEGAIKLADFGLARAFGVPVR--TYTHEVVTLWYRAPEILLGCKYYS 182
Query: 514 EKIDVYAFGIVLLELLSGK 532
+D+++ G + E+++ +
Sbjct: 183 TAVDIWSLGCIFAEMVTRR 201
>pdb|1H01|A Chain A, Cdk2 In Complex With A Disubstituted 2, 4-Bis Anilino
Pyrimidine Cdk4 Inhibitor
Length = 298
Score = 60.1 bits (144), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 49/199 (24%), Positives = 94/199 (47%), Gaps = 13/199 (6%)
Query: 339 VGKGGHSHVYRGCLPDGKELA----VKILKPSEDVLKEFASEIEIITALHHRNIISLFGF 394
+G+G + VY+ E+ +++ +E V EI ++ L+H NI+ L
Sbjct: 10 IGEGTYGVVYKARNKLTGEVVALXKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDV 69
Query: 395 CFEDNNLLLVYDFLSRGSLEENLHGNKKDGNAFGWTERYKVAVGVAEALDYLHNSCEQPV 454
+N L LV++FL + L++ + + G + Y + + L + H+ V
Sbjct: 70 IHTENKLYLVFEFLHQ-DLKKFMDASALTGIPLPLIKSY--LFQLLQGLAFCHS---HRV 123
Query: 455 IHKDVKSSNILLSDDFEPQLSDFGLASWLSTSSSHLTCTDVAGTFGYLAPEYFMHGK-VS 513
+H+D+K N+L++ + +L+DFGLA T T T Y APE + K S
Sbjct: 124 LHRDLKPQNLLINTEGAIKLADFGLARAFGVPVR--TYTHEVVTLWYRAPEILLGCKYYS 181
Query: 514 EKIDVYAFGIVLLELLSGK 532
+D+++ G + E+++ +
Sbjct: 182 TAVDIWSLGCIFAEMVTRR 200
>pdb|2QG5|A Chain A, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
pdb|2QG5|B Chain B, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
pdb|2QG5|D Chain D, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
Length = 294
Score = 60.1 bits (144), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 55/186 (29%), Positives = 89/186 (47%), Gaps = 16/186 (8%)
Query: 356 KELAVKILKPSEDVLKEFASEIEIITALHHRNIISLFGFCFEDN-NLLLVYDFLSRGSLE 414
+ A KI K + + F EIEI+ +L H NII L+ FEDN ++ LV + + G L
Sbjct: 53 RRAAKKIPKYFVEDVDRFKQEIEIMKSLDHPNIIRLYE-TFEDNTDIYLVMELCTGGELF 111
Query: 415 ENLHGNKKDGNAFGWTERYKVAVGVAEALDYLHNSCEQPVIHKDVKSSNILL---SDDFE 471
E + + F ++ ++ V A+ Y H + V H+D+K N L S D
Sbjct: 112 ERVVHKR----VFRESDAARIMKDVLSAVAYCH---KLNVAHRDLKPENFLFLTDSPDSP 164
Query: 472 PQLSDFGLASWLSTSSSHLTCTDVAGTFGYLAPEYFMHGKVSEKIDVYAFGIVLLELLSG 531
+L DFGLA+ T GT Y++P+ + G + D ++ G+++ LL G
Sbjct: 165 LKLIDFGLAARFKPGKMMRT---KVGTPYYVSPQ-VLEGLYGPECDEWSAGVMMYVLLCG 220
Query: 532 KKPINS 537
P ++
Sbjct: 221 YPPFSA 226
>pdb|2B9H|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Ste7
pdb|2B9I|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Msg5
pdb|2B9J|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Far1
pdb|2F49|A Chain A, Crystal Structure Of Fus3 In Complex With A Ste5 Peptide
pdb|2F49|B Chain B, Crystal Structure Of Fus3 In Complex With A Ste5 Peptide
pdb|2FA2|A Chain A, Crystal Structure Of Fus3 Without A Peptide From Ste5
pdb|2FA2|B Chain B, Crystal Structure Of Fus3 Without A Peptide From Ste5
Length = 353
Score = 60.1 bits (144), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 58/222 (26%), Positives = 104/222 (46%), Gaps = 25/222 (11%)
Query: 330 TSNFLPEYLVGKGGHSHVYRGC-LPDGKELAVKILKPSEDVLKEFAS--EIEIITALHHR 386
+S+F + L+G+G + V P G+ +A+K ++P + L + EI+I+ H
Sbjct: 10 SSDFQLKSLLGEGAYGVVCSATHKPTGEIVAIKKIEPFDKPLFALRTLREIKILKHFKHE 69
Query: 387 NIISLFGF----CFEDNNLLLVYDFLSRGSLEENLHGNKKDGNAFGWTERYKVAVGVAEA 442
NII++F FE+ N + + L + L + + + A
Sbjct: 70 NIITIFNIQRPDSFENFNEVYIIQELMQTDLHRVISTQMLSDDHIQY-----FIYQTLRA 124
Query: 443 LDYLHNSCEQPVIHKDVKSSNILLSDDFEPQLSDFGLASWLSTSSSHLT--------CTD 494
+ LH S VIH+D+K SN+L++ + + ++ DFGLA + S++ + +
Sbjct: 125 VKVLHGSN---VIHRDLKPSNLLINSNCDLKVCDFGLARIIDESAADNSEPTGQQSGMVE 181
Query: 495 VAGTFGYLAPEYFM-HGKVSEKIDVYAFGIVLLELLSGKKPI 535
T Y APE + K S +DV++ G +L EL ++PI
Sbjct: 182 FVATRWYRAPEVMLTSAKYSRAMDVWSCGCILAELFL-RRPI 222
>pdb|4I1Z|A Chain A, Crystal Structure Of The Monomeric (v948r) Form Of The
Gefitinib/erlotinib Resistant Egfr Kinase Domain
L858r+t790m
pdb|4I22|A Chain A, Structure Of The Monomeric (v948r)gefitinib/erlotinib
Resistant Double Mutant (l858r+t790m) Egfr Kinase Domain
Co-crystallized With Gefitinib
Length = 329
Score = 59.7 bits (143), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 46/208 (22%), Positives = 100/208 (48%), Gaps = 15/208 (7%)
Query: 338 LVGKGGHSHVYRGC-LPDGKEL----AVKILK--PSEDVLKEFASEIEIITALHHRNIIS 390
++G G VY+G +P+G+++ A+K L+ S KE E ++ ++ + ++
Sbjct: 24 VLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCR 83
Query: 391 LFGFCFEDNNLLLVYDFLSRGSLEENLHGNKKDGNAFGWTERYKVAVGVAEALDYLHNSC 450
L G C + + L+ + G L + + +K + G V +A+ ++YL +
Sbjct: 84 LLGICL-TSTVQLIMQLMPFGCLLDYVREHKDN---IGSQYLLNWCVQIAKGMNYLED-- 137
Query: 451 EQPVIHKDVKSSNILLSDDFEPQLSDFGLASWLSTSSSHLTCTDVAGTFGYLAPEYFMHG 510
+ ++H+D+ + N+L+ +++DFG A L ++A E +H
Sbjct: 138 -RRLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGGKVPIKWMALESILHR 196
Query: 511 KVSEKIDVYAFGIVLLELLS-GKKPINS 537
+ + DV+++G+ + EL++ G KP +
Sbjct: 197 IYTHQSDVWSYGVTVWELMTFGSKPYDG 224
>pdb|2W99|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
pdb|2W9Z|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 59.7 bits (143), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 50/223 (22%), Positives = 94/223 (42%), Gaps = 22/223 (9%)
Query: 329 ATSNFLPEYLVGKGGHSHVYRGCLPDGKEL----AVKILKPSEDVLKEFASEIEIIT--- 381
ATS + P +G G + VY+ P +V++ E + E+ ++
Sbjct: 2 ATSRYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGEEGLPISTVREVALLRRLE 61
Query: 382 ALHHRNIISLFGFCF-----EDNNLLLVYDFLSRGSLEENLHGNKKDGNAFGWTERYKVA 436
A H N++ L C + + LV++ + + + + +K +
Sbjct: 62 AFEHPNVVRLMDVCATSRTDREIKVTLVFEHVDQ---DLRTYLDKAPPPGLPAETIKDLM 118
Query: 437 VGVAEALDYLHNSCEQPVIHKDVKSSNILLSDDFEPQLSDFGLASWLSTSSSHLTCTDVA 496
LD+LH +C ++H+D+K NIL++ +L+DFGLA S + V
Sbjct: 119 RQFLRGLDFLHANC---IVHRDLKPENILVTSGGTVKLADFGLA---RIYSYQMALAPVV 172
Query: 497 GTFGYLAPEYFMHGKVSEKIDVYAFGIVLLELLSGKKPINSEN 539
T Y APE + + +D+++ G + E+ +KP+ N
Sbjct: 173 VTLWYRAPEVLLQSTYATPVDMWSVGCIFAEMFR-RKPLFCGN 214
>pdb|2JAM|A Chain A, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase I G
pdb|2JAM|B Chain B, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase I G
Length = 304
Score = 59.7 bits (143), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 55/214 (25%), Positives = 94/214 (43%), Gaps = 18/214 (8%)
Query: 332 NFLPEYLVGKGGHSHVY--RGCLPDGKELAVKILKPSEDVL-KEFASEIEIITALHHRNI 388
F+ ++G G S V+ + L GK A+K +K S +EI ++ + H NI
Sbjct: 10 TFIFMEVLGSGAFSEVFLVKQRL-TGKLFALKCIKKSPAFRDSSLENEIAVLKKIKHENI 68
Query: 389 ISLFGFCFEDNNLLLVYDFLSRGSLEENLHGNKKDGNAFGWTERYKVAVGVAEALDYLHN 448
++L + LV +S G L + + + + + V V A+ YLH
Sbjct: 69 VTLEDIYESTTHYYLVMQLVSGGELFDRI----LERGVYTEKDASLVIQQVLSAVKYLH- 123
Query: 449 SCEQPVIHKDVKSSNILL---SDDFEPQLSDFGLASWLSTSSSHLTCTDVAGTFGYLAPE 505
E ++H+D+K N+L ++ + ++DFGL+ C GT GY+APE
Sbjct: 124 --ENGIVHRDLKPENLLYLTPEENSKIMITDFGLSKMEQNGIMSTAC----GTPGYVAPE 177
Query: 506 YFMHGKVSEKIDVYAFGIVLLELLSGKKPINSEN 539
S+ +D ++ G++ LL G P E
Sbjct: 178 VLAQKPYSKAVDCWSIGVITYILLCGYPPFYEET 211
>pdb|3NX8|A Chain A, Human Camp Dependent Protein Kinase In Complex With Phenol
Length = 351
Score = 59.7 bits (143), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 52/191 (27%), Positives = 96/191 (50%), Gaps = 18/191 (9%)
Query: 355 GKELAVKILKPSEDV-LKEFA---SEIEIITALHHRNIISLFGFCFEDN-NLLLVYDFLS 409
G A+KIL + V LK+ +E I+ A++ ++ L F F+DN NL +V +++
Sbjct: 67 GNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKL-EFSFKDNSNLYMVMEYVP 125
Query: 410 RGSLEENLHGNKKDGNAFGWTERYKVAVGVAEALDYLHNSCEQPVIHKDVKSSNILLSDD 469
G + +L ++ G R+ A + +YLH+ +I++D+K N+L+
Sbjct: 126 GGEMFSHL---RRIGRFSEPHARF-YAAQIVLTFEYLHSL---DLIYRDLKPENLLIDQQ 178
Query: 470 FEPQLSDFGLASWLSTSSSHLTCTDVAGTFGYLAPEYFMHGKVSEKIDVYAFGIVLLELL 529
Q++DFG A + + L GT YLAPE + ++ +D +A G+++ E+
Sbjct: 179 GYIQVTDFGFAKRVKGRTWXL-----CGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMA 233
Query: 530 SGKKPINSENP 540
+G P ++ P
Sbjct: 234 AGYPPFFADQP 244
>pdb|3W2O|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Tak-285
pdb|3W2P|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Compound 2
pdb|3W2Q|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Hki-272
pdb|3W2R|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Compound 4
Length = 331
Score = 59.7 bits (143), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 46/208 (22%), Positives = 100/208 (48%), Gaps = 15/208 (7%)
Query: 338 LVGKGGHSHVYRGC-LPDGKEL----AVKILK--PSEDVLKEFASEIEIITALHHRNIIS 390
++G G VY+G +P+G+++ A+K L+ S KE E ++ ++ + ++
Sbjct: 26 VLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCR 85
Query: 391 LFGFCFEDNNLLLVYDFLSRGSLEENLHGNKKDGNAFGWTERYKVAVGVAEALDYLHNSC 450
L G C + + L+ + G L + + +K + G V +A+ ++YL +
Sbjct: 86 LLGICL-TSTVQLIMQLMPFGCLLDYVREHKDN---IGSQYLLNWCVQIAKGMNYLED-- 139
Query: 451 EQPVIHKDVKSSNILLSDDFEPQLSDFGLASWLSTSSSHLTCTDVAGTFGYLAPEYFMHG 510
+ ++H+D+ + N+L+ +++DFG A L ++A E +H
Sbjct: 140 -RRLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGGKVPIKWMALESILHR 198
Query: 511 KVSEKIDVYAFGIVLLELLS-GKKPINS 537
+ + DV+++G+ + EL++ G KP +
Sbjct: 199 IYTHQSDVWSYGVTVWELMTFGSKPYDG 226
>pdb|2C1A|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
Isoquinoline-5-Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl)amide
pdb|2C1B|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
(4r,2s)-5'-(4-(4-Chlorobenzyloxy)pyrrolidin-2-
Ylmethanesulfonyl)isoquinoline
pdb|2VO7|A Chain A, Structure Of Pka Complexed With 4-(4-Chlorobenzyl)-1-(7h-
Pyrrolo(2,3-D)pyrimidin-4-Yl)piperidin-4-Ylamine
pdb|3AG9|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1012
pdb|3AG9|B Chain B, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1012
Length = 351
Score = 59.7 bits (143), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 52/191 (27%), Positives = 96/191 (50%), Gaps = 18/191 (9%)
Query: 355 GKELAVKILKPSEDV-LKEFA---SEIEIITALHHRNIISLFGFCFEDN-NLLLVYDFLS 409
G A+KIL + V LK+ +E I+ A++ ++ L F F+DN NL +V +++
Sbjct: 67 GNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKL-EFSFKDNSNLYMVMEYVP 125
Query: 410 RGSLEENLHGNKKDGNAFGWTERYKVAVGVAEALDYLHNSCEQPVIHKDVKSSNILLSDD 469
G + +L ++ G R+ A + +YLH+ +I++D+K N+L+
Sbjct: 126 GGEMFSHL---RRIGRFSEPHARF-YAAQIVLTFEYLHSL---DLIYRDLKPENLLIDQQ 178
Query: 470 FEPQLSDFGLASWLSTSSSHLTCTDVAGTFGYLAPEYFMHGKVSEKIDVYAFGIVLLELL 529
Q++DFG A + + L GT YLAPE + ++ +D +A G+++ E+
Sbjct: 179 GYIQVTDFGFAKRVKGRTWXL-----CGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMA 233
Query: 530 SGKKPINSENP 540
+G P ++ P
Sbjct: 234 AGYPPFFADQP 244
>pdb|1QMZ|A Chain A, Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Complex
pdb|1QMZ|C Chain C, Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Complex
pdb|1GY3|A Chain A, Pcdk2CYCLIN A IN COMPLEX WITH MGADP, NITRATE AND PEPTIDE
SUBSTRATE
pdb|1GY3|C Chain C, Pcdk2CYCLIN A IN COMPLEX WITH MGADP, NITRATE AND PEPTIDE
SUBSTRATE
pdb|1P5E|A Chain A, The Strucure Of Phospho-Cdk2CYCLIN A IN COMPLEX WITH THE
Inhibitor 4,5,6,7-Tetrabromobenzotriazole (Tbs)
pdb|1P5E|C Chain C, The Strucure Of Phospho-Cdk2CYCLIN A IN COMPLEX WITH THE
Inhibitor 4,5,6,7-Tetrabromobenzotriazole (Tbs)
pdb|2CCH|A Chain A, The Crystal Structure Of Cdk2 Cyclin A In Complex With A
Substrate Peptide Derived From Cdc Modified With A
Gamma- Linked Atp Analogue
pdb|2CCH|C Chain C, The Crystal Structure Of Cdk2 Cyclin A In Complex With A
Substrate Peptide Derived From Cdc Modified With A
Gamma- Linked Atp Analogue
pdb|2CCI|A Chain A, Crystal Structure Of Phospho-Cdk2 Cyclin A In Complex With
A Peptide Containing Both The Substrate And Recruitment
Sites Of Cdc6
pdb|2CCI|C Chain C, Crystal Structure Of Phospho-Cdk2 Cyclin A In Complex With
A Peptide Containing Both The Substrate And Recruitment
Sites Of Cdc6
pdb|2G9X|A Chain A, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
COMPLEX WITH THE Inhibitor Nu6271
pdb|2G9X|C Chain C, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
COMPLEX WITH THE Inhibitor Nu6271
pdb|3DDP|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Cr8
pdb|3DDP|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Cr8
pdb|3DDQ|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Roscovitine
pdb|3DDQ|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Roscovitine
pdb|3DOG|A Chain A, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
Complex With The Inhibitor N-&-N1
pdb|3DOG|C Chain C, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
Complex With The Inhibitor N-&-N1
Length = 299
Score = 59.7 bits (143), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 52/200 (26%), Positives = 97/200 (48%), Gaps = 15/200 (7%)
Query: 339 VGKGGHSHVY--RGCLPDGKELAVKILK---PSEDVLKEFASEIEIITALHHRNIISLFG 393
+G+G + VY R L G+ +A+K ++ +E V EI ++ L+H NI+ L
Sbjct: 11 IGEGTYGVVYKARNKL-TGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLD 69
Query: 394 FCFEDNNLLLVYDFLSRGSLEENLHGNKKDGNAFGWTERYKVAVGVAEALDYLHNSCEQP 453
+N L LV++FL + L++ + + G + Y + + L + H+
Sbjct: 70 VIHTENKLYLVFEFLHQ-DLKKFMDASALTGIPLPLIKSY--LFQLLQGLAFCHS---HR 123
Query: 454 VIHKDVKSSNILLSDDFEPQLSDFGLASWLSTSSSHLTCTDVAGTFGYLAPEYFMHGK-V 512
V+H+D+K N+L++ + +L+DFGLA T T Y APE + K
Sbjct: 124 VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVR--TYXHEVVTLWYRAPEILLGCKYY 181
Query: 513 SEKIDVYAFGIVLLELLSGK 532
S +D+++ G + E+++ +
Sbjct: 182 STAVDIWSLGCIFAEMVTRR 201
>pdb|1SVH|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 8
pdb|1XH5|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|1XH6|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|1XH8|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|2GFC|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
Length = 350
Score = 59.7 bits (143), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 52/191 (27%), Positives = 96/191 (50%), Gaps = 18/191 (9%)
Query: 355 GKELAVKILKPSEDV-LKEFA---SEIEIITALHHRNIISLFGFCFEDN-NLLLVYDFLS 409
G A+KIL + V LK+ +E I+ A++ ++ L F F+DN NL +V +++
Sbjct: 66 GNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKL-EFSFKDNSNLYMVMEYVP 124
Query: 410 RGSLEENLHGNKKDGNAFGWTERYKVAVGVAEALDYLHNSCEQPVIHKDVKSSNILLSDD 469
G + +L ++ G R+ A + +YLH+ +I++D+K N+L+
Sbjct: 125 GGEMFSHL---RRIGRFSEPHARF-YAAQIVLTFEYLHSL---DLIYRDLKPENLLIDQQ 177
Query: 470 FEPQLSDFGLASWLSTSSSHLTCTDVAGTFGYLAPEYFMHGKVSEKIDVYAFGIVLLELL 529
Q++DFG A + + L GT YLAPE + ++ +D +A G+++ E+
Sbjct: 178 GYIQVTDFGFAKRVKGRTWXL-----CGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMA 232
Query: 530 SGKKPINSENP 540
+G P ++ P
Sbjct: 233 AGYPPFFADQP 243
>pdb|3AGL|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1039
pdb|3AGL|B Chain B, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1039
pdb|3VQH|A Chain A, Bromine Sad Partially Resolves Multiple Binding Modes For
Pka Inhibitor H-89
Length = 351
Score = 59.7 bits (143), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 52/191 (27%), Positives = 96/191 (50%), Gaps = 18/191 (9%)
Query: 355 GKELAVKILKPSEDV-LKEFA---SEIEIITALHHRNIISLFGFCFEDN-NLLLVYDFLS 409
G A+KIL + V LK+ +E I+ A++ ++ L F F+DN NL +V +++
Sbjct: 67 GNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKL-EFSFKDNSNLYMVMEYVP 125
Query: 410 RGSLEENLHGNKKDGNAFGWTERYKVAVGVAEALDYLHNSCEQPVIHKDVKSSNILLSDD 469
G + +L ++ G R+ A + +YLH+ +I++D+K N+L+
Sbjct: 126 GGEMFSHL---RRIGRFSEPHARF-YAAQIVLTFEYLHSL---DLIYRDLKPENLLIDQQ 178
Query: 470 FEPQLSDFGLASWLSTSSSHLTCTDVAGTFGYLAPEYFMHGKVSEKIDVYAFGIVLLELL 529
Q++DFG A + + L GT YLAPE + ++ +D +A G+++ E+
Sbjct: 179 GYIQVTDFGFAKRVKGRTWXL-----CGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMA 233
Query: 530 SGKKPINSENP 540
+G P ++ P
Sbjct: 234 AGYPPFFADQP 244
>pdb|1UA2|A Chain A, Crystal Structure Of Human Cdk7
pdb|1UA2|B Chain B, Crystal Structure Of Human Cdk7
pdb|1UA2|C Chain C, Crystal Structure Of Human Cdk7
pdb|1UA2|D Chain D, Crystal Structure Of Human Cdk7
Length = 346
Score = 59.7 bits (143), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 50/157 (31%), Positives = 81/157 (51%), Gaps = 14/157 (8%)
Query: 376 EIEIITALHHRNIISLFGFCFEDNNLLLVYDFLSRGSLEENLHGNKKDGNAFGWTERYKV 435
EI+++ L H NII L +N+ LV+DF+ E +L KD N+ T +
Sbjct: 62 EIKLLQELSHPNIIGLLDAFGHKSNISLVFDFM-----ETDLEVIIKD-NSLVLTPSHIK 115
Query: 436 AVGVA--EALDYLHNSCEQPVIHKDVKSSNILLSDDFEPQLSDFGLASWLSTSSSHLTCT 493
A + + L+YLH + ++H+D+K +N+LL ++ +L+DFGLA S S +
Sbjct: 116 AYMLMTLQGLEYLH---QHWILHRDLKPNNLLLDENGVLKLADFGLAK--SFGSPNRAYX 170
Query: 494 DVAGTFGYLAPEYFMHGKV-SEKIDVYAFGIVLLELL 529
T Y APE ++ +D++A G +L ELL
Sbjct: 171 HQVVTRWYRAPELLFGARMYGVGVDMWAVGCILAELL 207
>pdb|1STC|E Chain E, Camp-Dependent Protein Kinase, Alpha-Catalytic Subunit In
Complex With Staurosporine
pdb|1Q8T|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase
(Pka) In Complex With Rho-Kinase Inhibitor Y-27632
pdb|1Q8U|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase In
Complex With Rho-Kinase Inhibitor H-1152p
pdb|1SVE|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 1
pdb|1SVG|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 4
pdb|1VEB|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 5
pdb|3E8C|A Chain A, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|B Chain B, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|C Chain C, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|D Chain D, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|E Chain E, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|F Chain F, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8E|A Chain A, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|B Chain B, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|E Chain E, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|I Chain I, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|L Chain L, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|P Chain P, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
Length = 350
Score = 59.7 bits (143), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 52/191 (27%), Positives = 96/191 (50%), Gaps = 18/191 (9%)
Query: 355 GKELAVKILKPSEDV-LKEFA---SEIEIITALHHRNIISLFGFCFEDN-NLLLVYDFLS 409
G A+KIL + V LK+ +E I+ A++ ++ L F F+DN NL +V +++
Sbjct: 66 GNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKL-EFSFKDNSNLYMVMEYVP 124
Query: 410 RGSLEENLHGNKKDGNAFGWTERYKVAVGVAEALDYLHNSCEQPVIHKDVKSSNILLSDD 469
G + +L ++ G R+ A + +YLH+ +I++D+K N+L+
Sbjct: 125 GGEMFSHL---RRIGRFSEPHARF-YAAQIVLTFEYLHSL---DLIYRDLKPENLLIDQQ 177
Query: 470 FEPQLSDFGLASWLSTSSSHLTCTDVAGTFGYLAPEYFMHGKVSEKIDVYAFGIVLLELL 529
Q++DFG A + + L GT YLAPE + ++ +D +A G+++ E+
Sbjct: 178 GYIQVTDFGFAKRVKGRTWXL-----CGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMA 232
Query: 530 SGKKPINSENP 540
+G P ++ P
Sbjct: 233 AGYPPFFADQP 243
>pdb|3DND|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
pdb|3DNE|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
Length = 350
Score = 59.7 bits (143), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 52/191 (27%), Positives = 96/191 (50%), Gaps = 18/191 (9%)
Query: 355 GKELAVKILKPSEDV-LKEFA---SEIEIITALHHRNIISLFGFCFEDN-NLLLVYDFLS 409
G A+KIL + V LK+ +E I+ A++ ++ L F F+DN NL +V +++
Sbjct: 66 GNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKL-EFSFKDNSNLYMVMEYVP 124
Query: 410 RGSLEENLHGNKKDGNAFGWTERYKVAVGVAEALDYLHNSCEQPVIHKDVKSSNILLSDD 469
G + +L ++ G R+ A + +YLH+ +I++D+K N+L+
Sbjct: 125 GGEMFSHL---RRIGRFSEPHARF-YAAQIVLTFEYLHSL---DLIYRDLKPENLLIDQQ 177
Query: 470 FEPQLSDFGLASWLSTSSSHLTCTDVAGTFGYLAPEYFMHGKVSEKIDVYAFGIVLLELL 529
Q++DFG A + + L GT YLAPE + ++ +D +A G+++ E+
Sbjct: 178 GYIQVTDFGFAKRVKGRTWXL-----CGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMA 232
Query: 530 SGKKPINSENP 540
+G P ++ P
Sbjct: 233 AGYPPFFADQP 243
>pdb|4EOS|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Ro3306
pdb|4EOS|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Ro3306
Length = 300
Score = 59.7 bits (143), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 52/200 (26%), Positives = 97/200 (48%), Gaps = 15/200 (7%)
Query: 339 VGKGGHSHVY--RGCLPDGKELAVKILK---PSEDVLKEFASEIEIITALHHRNIISLFG 393
+G+G + VY R L G+ +A+K ++ +E V EI ++ L+H NI+ L
Sbjct: 13 IGEGTYGVVYKARNKL-TGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLD 71
Query: 394 FCFEDNNLLLVYDFLSRGSLEENLHGNKKDGNAFGWTERYKVAVGVAEALDYLHNSCEQP 453
+N L LV++FL + L++ + + G + Y + + L + H+
Sbjct: 72 VIHTENKLYLVFEFLHQ-DLKKFMDASALTGIPLPLIKSY--LFQLLQGLAFCHS---HR 125
Query: 454 VIHKDVKSSNILLSDDFEPQLSDFGLASWLSTSSSHLTCTDVAGTFGYLAPEYFMHGK-V 512
V+H+D+K N+L++ + +L+DFGLA T T Y APE + K
Sbjct: 126 VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVR--TYXHEVVTLWYRAPEILLGCKYY 183
Query: 513 SEKIDVYAFGIVLLELLSGK 532
S +D+++ G + E+++ +
Sbjct: 184 STAVDIWSLGCIFAEMVTRR 203
>pdb|1SYK|A Chain A, Crystal Structure Of E230q Mutant Of Camp-Dependent
Protein Kinase Reveals Unexpected Apoenzyme Conformation
pdb|1SYK|B Chain B, Crystal Structure Of E230q Mutant Of Camp-Dependent
Protein Kinase Reveals Unexpected Apoenzyme Conformation
Length = 350
Score = 59.7 bits (143), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 51/191 (26%), Positives = 97/191 (50%), Gaps = 18/191 (9%)
Query: 355 GKELAVKILKPSEDV-LKEFA---SEIEIITALHHRNIISLFGFCFEDN-NLLLVYDFLS 409
G A+KIL + V LK+ +E I+ A++ ++ L F F+DN NL +V ++++
Sbjct: 66 GNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKL-EFSFKDNSNLYMVMEYVA 124
Query: 410 RGSLEENLHGNKKDGNAFGWTERYKVAVGVAEALDYLHNSCEQPVIHKDVKSSNILLSDD 469
G + +L ++ G R+ A + +YLH+ +I++D+K N+L+
Sbjct: 125 GGEMFSHL---RRIGRFSEPHARF-YAAQIVLTFEYLHSL---DLIYRDLKPENLLIDQQ 177
Query: 470 FEPQLSDFGLASWLSTSSSHLTCTDVAGTFGYLAPEYFMHGKVSEKIDVYAFGIVLLELL 529
Q++DFG A + + L GT YLAPE + ++ +D +A G+++ ++
Sbjct: 178 GYIQVTDFGFAKRVKGRTWXL-----CGTPEYLAPEIILSKGYNKAVDWWALGVLIYQMA 232
Query: 530 SGKKPINSENP 540
+G P ++ P
Sbjct: 233 AGYPPFFADQP 243
>pdb|4AE6|A Chain A, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit Calpha 2
pdb|4AE6|B Chain B, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit Calpha 2
Length = 343
Score = 59.7 bits (143), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 52/191 (27%), Positives = 96/191 (50%), Gaps = 18/191 (9%)
Query: 355 GKELAVKILKPSEDV-LKEFA---SEIEIITALHHRNIISLFGFCFEDN-NLLLVYDFLS 409
G A+KIL + V LK+ +E I+ A++ ++ L F F+DN NL +V +++
Sbjct: 59 GNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKL-EFSFKDNSNLYMVMEYVP 117
Query: 410 RGSLEENLHGNKKDGNAFGWTERYKVAVGVAEALDYLHNSCEQPVIHKDVKSSNILLSDD 469
G + +L ++ G R+ A + +YLH+ +I++D+K N+L+
Sbjct: 118 GGEMFSHL---RRIGRFSEPHARF-YAAQIVLTFEYLHSL---DLIYRDLKPENLLIDQQ 170
Query: 470 FEPQLSDFGLASWLSTSSSHLTCTDVAGTFGYLAPEYFMHGKVSEKIDVYAFGIVLLELL 529
Q++DFG A + + L GT YLAPE + ++ +D +A G+++ E+
Sbjct: 171 GYIQVTDFGFAKRVKGRTWXL-----CGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMA 225
Query: 530 SGKKPINSENP 540
+G P ++ P
Sbjct: 226 AGYPPFFADQP 236
>pdb|3AGM|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-670
pdb|3L9L|A Chain A, Crystal Structure Of Pka With Compound 36
pdb|3L9L|B Chain B, Crystal Structure Of Pka With Compound 36
pdb|3OOG|A Chain A, Human Camp-Dependent Protein Kinase In Complex With A
Small Fragment
pdb|3OVV|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3OWP|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3OXT|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3P0M|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3POO|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
Length = 351
Score = 59.3 bits (142), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 52/191 (27%), Positives = 96/191 (50%), Gaps = 18/191 (9%)
Query: 355 GKELAVKILKPSEDV-LKEFA---SEIEIITALHHRNIISLFGFCFEDN-NLLLVYDFLS 409
G A+KIL + V LK+ +E I+ A++ ++ L F F+DN NL +V +++
Sbjct: 67 GNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKL-EFSFKDNSNLYMVMEYVP 125
Query: 410 RGSLEENLHGNKKDGNAFGWTERYKVAVGVAEALDYLHNSCEQPVIHKDVKSSNILLSDD 469
G + +L ++ G R+ A + +YLH+ +I++D+K N+L+
Sbjct: 126 GGEMFSHL---RRIGRFSEPHARF-YAAQIVLTFEYLHSL---DLIYRDLKPENLLIDQQ 178
Query: 470 FEPQLSDFGLASWLSTSSSHLTCTDVAGTFGYLAPEYFMHGKVSEKIDVYAFGIVLLELL 529
Q++DFG A + + L GT YLAPE + ++ +D +A G+++ E+
Sbjct: 179 GYIQVTDFGFAKRVKGRTWXL-----CGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMA 233
Query: 530 SGKKPINSENP 540
+G P ++ P
Sbjct: 234 AGYPPFFADQP 244
>pdb|1W98|A Chain A, The Structural Basis Of Cdk2 Activation By Cyclin E
pdb|4EOR|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Nu6102
pdb|4EOR|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Nu6102
Length = 298
Score = 59.3 bits (142), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 52/200 (26%), Positives = 97/200 (48%), Gaps = 15/200 (7%)
Query: 339 VGKGGHSHVY--RGCLPDGKELAVKILK---PSEDVLKEFASEIEIITALHHRNIISLFG 393
+G+G + VY R L G+ +A+K ++ +E V EI ++ L+H NI+ L
Sbjct: 11 IGEGTYGVVYKARNKL-TGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLD 69
Query: 394 FCFEDNNLLLVYDFLSRGSLEENLHGNKKDGNAFGWTERYKVAVGVAEALDYLHNSCEQP 453
+N L LV++FL + L++ + + G + Y + + L + H+
Sbjct: 70 VIHTENKLYLVFEFLHQ-DLKKFMDASALTGIPLPLIKSY--LFQLLQGLAFCHS---HR 123
Query: 454 VIHKDVKSSNILLSDDFEPQLSDFGLASWLSTSSSHLTCTDVAGTFGYLAPEYFMHGK-V 512
V+H+D+K N+L++ + +L+DFGLA T T Y APE + K
Sbjct: 124 VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVR--TYXHEVVTLWYRAPEILLGCKYY 181
Query: 513 SEKIDVYAFGIVLLELLSGK 532
S +D+++ G + E+++ +
Sbjct: 182 STAVDIWSLGCIFAEMVTRR 201
>pdb|3MVJ|A Chain A, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
pdb|3MVJ|B Chain B, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
pdb|3MVJ|E Chain E, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
Length = 371
Score = 59.3 bits (142), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 52/191 (27%), Positives = 96/191 (50%), Gaps = 18/191 (9%)
Query: 355 GKELAVKILKPSEDV-LKEFA---SEIEIITALHHRNIISLFGFCFEDN-NLLLVYDFLS 409
G A+KIL + V LK+ +E I+ A++ ++ L F F+DN NL +V +++
Sbjct: 87 GNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKL-EFSFKDNSNLYMVMEYVP 145
Query: 410 RGSLEENLHGNKKDGNAFGWTERYKVAVGVAEALDYLHNSCEQPVIHKDVKSSNILLSDD 469
G + +L ++ G R+ A + +YLH+ +I++D+K N+L+
Sbjct: 146 GGEMFSHL---RRIGRFSEPHARF-YAAQIVLTFEYLHSL---DLIYRDLKPENLLIDQQ 198
Query: 470 FEPQLSDFGLASWLSTSSSHLTCTDVAGTFGYLAPEYFMHGKVSEKIDVYAFGIVLLELL 529
Q++DFG A + + L GT YLAPE + ++ +D +A G+++ E+
Sbjct: 199 GYIQVTDFGFAKRVKGRTWXL-----CGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMA 253
Query: 530 SGKKPINSENP 540
+G P ++ P
Sbjct: 254 AGYPPFFADQP 264
>pdb|3G33|A Chain A, Crystal Structure Of Cdk4CYCLIN D3
pdb|3G33|C Chain C, Crystal Structure Of Cdk4CYCLIN D3
Length = 308
Score = 59.3 bits (142), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 54/227 (23%), Positives = 99/227 (43%), Gaps = 27/227 (11%)
Query: 329 ATSNFLPEYLVGKGGHSHVYRGCLP-DGKELAVKILK-PSE---------DVLKEFASEI 377
ATS + P +G G + VY+ P G +A+K ++ P+ ++E A +
Sbjct: 7 ATSRYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGGGGGGGLPISTVREVAL-L 65
Query: 378 EIITALHHRNIISLFGFCFEDNN-----LLLVYDFLSRGSLEENLHGNKKDGNAFGWTER 432
+ A H N++ L C + LV++ + + + + +K
Sbjct: 66 RRLEAFEHPNVVRLMDVCATSRTDREIKVTLVFEHVDQ---DLRTYLDKAPPPGLPAETI 122
Query: 433 YKVAVGVAEALDYLHNSCEQPVIHKDVKSSNILLSDDFEPQLSDFGLASWLSTSSSHLTC 492
+ LD+LH +C ++H+D+K NIL++ +L+DFGLA S +
Sbjct: 123 KDLMRQFLRGLDFLHANC---IVHRDLKPENILVTSGGTVKLADFGLA---RIYSYQMAL 176
Query: 493 TDVAGTFGYLAPEYFMHGKVSEKIDVYAFGIVLLELLSGKKPINSEN 539
T V T Y APE + + +D+++ G + E+ +KP+ N
Sbjct: 177 TPVVVTLWYRAPEVLLQSTYATPVDMWSVGCIFAEMFR-RKPLFCGN 222
>pdb|4I21|A Chain A, Crystal Structure Of L858r + T790m Egfr Kinase Domain In
Complex With Mig6 Peptide
pdb|4I21|B Chain B, Crystal Structure Of L858r + T790m Egfr Kinase Domain In
Complex With Mig6 Peptide
Length = 329
Score = 59.3 bits (142), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 46/208 (22%), Positives = 100/208 (48%), Gaps = 15/208 (7%)
Query: 338 LVGKGGHSHVYRGC-LPDGKEL----AVKILK--PSEDVLKEFASEIEIITALHHRNIIS 390
++G G VY+G +P+G+++ A+K L+ S KE E ++ ++ + ++
Sbjct: 24 VLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCR 83
Query: 391 LFGFCFEDNNLLLVYDFLSRGSLEENLHGNKKDGNAFGWTERYKVAVGVAEALDYLHNSC 450
L G C + + L+ + G L + + +K + G V +A+ ++YL +
Sbjct: 84 LLGICL-TSTVQLIMQLMPFGCLLDYVREHKDN---IGSQYLLNWCVQIAKGMNYLED-- 137
Query: 451 EQPVIHKDVKSSNILLSDDFEPQLSDFGLASWLSTSSSHLTCTDVAGTFGYLAPEYFMHG 510
+ ++H+D+ + N+L+ +++DFG A L ++A E +H
Sbjct: 138 -RRLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGGKVPIKWMALESILHR 196
Query: 511 KVSEKIDVYAFGIVLLELLS-GKKPINS 537
+ + DV+++G+ + EL++ G KP +
Sbjct: 197 IYTHQSDVWSYGVTVWELMTFGSKPYDG 224
>pdb|4BCQ|A Chain A, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCQ|C Chain C, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 301
Score = 59.3 bits (142), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 52/200 (26%), Positives = 97/200 (48%), Gaps = 15/200 (7%)
Query: 339 VGKGGHSHVY--RGCLPDGKELAVKILK---PSEDVLKEFASEIEIITALHHRNIISLFG 393
+G+G + VY R L G+ +A+K ++ +E V EI ++ L+H NI+ L
Sbjct: 13 IGEGTYGVVYKARNKL-TGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLD 71
Query: 394 FCFEDNNLLLVYDFLSRGSLEENLHGNKKDGNAFGWTERYKVAVGVAEALDYLHNSCEQP 453
+N L LV++FL + L++ + + G + Y + + L + H+
Sbjct: 72 VIHTENKLYLVFEFLHQ-DLKKFMDASALTGIPLPLIKSY--LFQLLQGLAFCHS---HR 125
Query: 454 VIHKDVKSSNILLSDDFEPQLSDFGLASWLSTSSSHLTCTDVAGTFGYLAPEYFMHGK-V 512
V+H+D+K N+L++ + +L+DFGLA T T Y APE + K
Sbjct: 126 VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVR--TYXHEVVTLWYRAPEILLGCKYY 183
Query: 513 SEKIDVYAFGIVLLELLSGK 532
S +D+++ G + E+++ +
Sbjct: 184 STAVDIWSLGCIFAEMVTRR 203
>pdb|3BHT|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 3
pdb|3BHT|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 3
pdb|3BHU|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 5
pdb|3BHU|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 5
pdb|3BHV|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Variolin B
pdb|3BHV|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Variolin B
pdb|3MY5|A Chain A, Cdk2CYCLINA IN COMPLEX WITH DRB
pdb|3MY5|C Chain C, Cdk2CYCLINA IN COMPLEX WITH DRB
pdb|3TNW|A Chain A, Structure Of Cdk2CYCLIN A IN COMPLEX WITH CAN508
pdb|3TNW|C Chain C, Structure Of Cdk2CYCLIN A IN COMPLEX WITH CAN508
pdb|4BCO|A Chain A, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCO|C Chain C, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 300
Score = 59.3 bits (142), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 52/200 (26%), Positives = 97/200 (48%), Gaps = 15/200 (7%)
Query: 339 VGKGGHSHVY--RGCLPDGKELAVKILK---PSEDVLKEFASEIEIITALHHRNIISLFG 393
+G+G + VY R L G+ +A+K ++ +E V EI ++ L+H NI+ L
Sbjct: 12 IGEGTYGVVYKARNKL-TGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLD 70
Query: 394 FCFEDNNLLLVYDFLSRGSLEENLHGNKKDGNAFGWTERYKVAVGVAEALDYLHNSCEQP 453
+N L LV++FL + L++ + + G + Y + + L + H+
Sbjct: 71 VIHTENKLYLVFEFLHQ-DLKKFMDASALTGIPLPLIKSY--LFQLLQGLAFCHS---HR 124
Query: 454 VIHKDVKSSNILLSDDFEPQLSDFGLASWLSTSSSHLTCTDVAGTFGYLAPEYFMHGK-V 512
V+H+D+K N+L++ + +L+DFGLA T T Y APE + K
Sbjct: 125 VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVR--TYXHEVVTLWYRAPEILLGCKYY 182
Query: 513 SEKIDVYAFGIVLLELLSGK 532
S +D+++ G + E+++ +
Sbjct: 183 STAVDIWSLGCIFAEMVTRR 202
>pdb|1JST|A Chain A, Phosphorylated Cyclin-Dependent Kinase-2 Bound To Cyclin A
pdb|1JST|C Chain C, Phosphorylated Cyclin-Dependent Kinase-2 Bound To Cyclin A
pdb|1JSU|A Chain A, P27(Kip1)CYCLIN ACDK2 COMPLEX
pdb|1FQ1|B Chain B, Crystal Structure Of Kinase Associated Phosphatase (Kap)
In Complex With Phospho-Cdk2
pdb|2C6T|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6T|C Chain C, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2CJM|A Chain A, Mechanism Of Cdk Inhibition By Active Site
Phosphorylation: Cdk2 Y15p T160p In Complex With Cyclin
A Structure
pdb|2CJM|C Chain C, Mechanism Of Cdk Inhibition By Active Site
Phosphorylation: Cdk2 Y15p T160p In Complex With Cyclin
A Structure
pdb|2UZB|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZB|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZD|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZD|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZE|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZE|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZL|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZL|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|4II5|A Chain A, Structure Of Pcdk2/cyclina Bound To Adp And 1 Magnesium
Ion
pdb|4II5|C Chain C, Structure Of Pcdk2/cyclina Bound To Adp And 1 Magnesium
Ion
Length = 298
Score = 59.3 bits (142), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 52/200 (26%), Positives = 97/200 (48%), Gaps = 15/200 (7%)
Query: 339 VGKGGHSHVY--RGCLPDGKELAVKILK---PSEDVLKEFASEIEIITALHHRNIISLFG 393
+G+G + VY R L G+ +A+K ++ +E V EI ++ L+H NI+ L
Sbjct: 10 IGEGTYGVVYKARNKL-TGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLD 68
Query: 394 FCFEDNNLLLVYDFLSRGSLEENLHGNKKDGNAFGWTERYKVAVGVAEALDYLHNSCEQP 453
+N L LV++FL + L++ + + G + Y + + L + H+
Sbjct: 69 VIHTENKLYLVFEFLHQ-DLKKFMDASALTGIPLPLIKSY--LFQLLQGLAFCHS---HR 122
Query: 454 VIHKDVKSSNILLSDDFEPQLSDFGLASWLSTSSSHLTCTDVAGTFGYLAPEYFMHGK-V 512
V+H+D+K N+L++ + +L+DFGLA T T Y APE + K
Sbjct: 123 VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVR--TYXHEVVTLWYRAPEILLGCKYY 180
Query: 513 SEKIDVYAFGIVLLELLSGK 532
S +D+++ G + E+++ +
Sbjct: 181 STAVDIWSLGCIFAEMVTRR 200
>pdb|4I20|A Chain A, Crystal Structure Of Monomeric (v948r) Primary Oncogenic
Mutant L858r Egfr Kinase Domain
Length = 329
Score = 59.3 bits (142), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 46/208 (22%), Positives = 100/208 (48%), Gaps = 15/208 (7%)
Query: 338 LVGKGGHSHVYRGC-LPDGKEL----AVKILK--PSEDVLKEFASEIEIITALHHRNIIS 390
++G G VY+G +P+G+++ A+K L+ S KE E ++ ++ + ++
Sbjct: 24 VLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCR 83
Query: 391 LFGFCFEDNNLLLVYDFLSRGSLEENLHGNKKDGNAFGWTERYKVAVGVAEALDYLHNSC 450
L G C + + L+ + G L + + +K + G V +A+ ++YL +
Sbjct: 84 LLGICL-TSTVQLITQLMPFGCLLDYVREHKDN---IGSQYLLNWCVQIAKGMNYLED-- 137
Query: 451 EQPVIHKDVKSSNILLSDDFEPQLSDFGLASWLSTSSSHLTCTDVAGTFGYLAPEYFMHG 510
+ ++H+D+ + N+L+ +++DFG A L ++A E +H
Sbjct: 138 -RRLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGGKVPIKWMALESILHR 196
Query: 511 KVSEKIDVYAFGIVLLELLS-GKKPINS 537
+ + DV+++G+ + EL++ G KP +
Sbjct: 197 IYTHQSDVWSYGVTVWELMTFGSKPYDG 224
>pdb|4EOI|A Chain A, Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
pdb|4EOI|C Chain C, Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
Length = 299
Score = 59.3 bits (142), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 52/200 (26%), Positives = 97/200 (48%), Gaps = 15/200 (7%)
Query: 339 VGKGGHSHVY--RGCLPDGKELAVKILK---PSEDVLKEFASEIEIITALHHRNIISLFG 393
+G+G + VY R L G+ +A+K ++ +E V EI ++ L+H NI+ L
Sbjct: 11 IGEGTYGVVYKARNKL-TGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLD 69
Query: 394 FCFEDNNLLLVYDFLSRGSLEENLHGNKKDGNAFGWTERYKVAVGVAEALDYLHNSCEQP 453
+N L LV++FL + L++ + + G + Y + + L + H+
Sbjct: 70 VIHTENKLYLVFEFLHQ-DLKDFMDASALTGIPLPLIKSY--LFQLLQGLAFCHS---HR 123
Query: 454 VIHKDVKSSNILLSDDFEPQLSDFGLASWLSTSSSHLTCTDVAGTFGYLAPEYFMHGK-V 512
V+H+D+K N+L++ + +L+DFGLA T T Y APE + K
Sbjct: 124 VLHRDLKPENLLINTEGAIKLADFGLARAFGVPVR--TYXHEVVTLWYRAPEILLGCKYY 181
Query: 513 SEKIDVYAFGIVLLELLSGK 532
S +D+++ G + E+++ +
Sbjct: 182 STAVDIWSLGCIFAEMVTRR 201
>pdb|1I44|A Chain A, Crystallographic Studies Of An Activation Loop Mutant Of
The Insulin Receptor Tyrosine Kinase
Length = 306
Score = 59.3 bits (142), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 46/206 (22%), Positives = 95/206 (46%), Gaps = 17/206 (8%)
Query: 339 VGKGGHSHVYRGCLPD------GKELAVKILKPSEDVLK--EFASEIEIITALHHRNIIS 390
+G+G VY G D +AVK + S + + EF +E ++ +++
Sbjct: 25 LGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVVR 84
Query: 391 LFGFCFEDNNLLLVYDFLSRGSLEENLHGNKKDG-NAFG-----WTERYKVAVGVAEALD 444
L G + L+V + ++ G L+ L + + N G E ++A +A+ +
Sbjct: 85 LLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGMA 144
Query: 445 YLHNSCEQPVIHKDVKSSNILLSDDFEPQLSDFGLASWLSTSSSHLTCTDVAGTFGYLAP 504
YL+ + +H+D+ + N +++ DF ++ DFG+ + ++ + ++AP
Sbjct: 145 YLN---AKKFVHRDLAARNCMVAHDFTVKIGDFGMTRDIYETAYYRKGGKGLLPVRWMAP 201
Query: 505 EYFMHGKVSEKIDVYAFGIVLLELLS 530
E G + D+++FG+VL E+ S
Sbjct: 202 ESLKDGVFTTSSDMWSFGVVLWEITS 227
>pdb|3UG1|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN The Apo Form
pdb|3UG2|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN Complex With Gefitinib
pdb|3VJN|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN Complex With Amppnp
Length = 334
Score = 59.3 bits (142), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 46/208 (22%), Positives = 100/208 (48%), Gaps = 15/208 (7%)
Query: 338 LVGKGGHSHVYRGC-LPDGKEL----AVKILK--PSEDVLKEFASEIEIITALHHRNIIS 390
++ G VY+G +P+G+++ A+K L+ S KE E ++ ++ + ++
Sbjct: 29 VLSSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCR 88
Query: 391 LFGFCFEDNNLLLVYDFLSRGSLEENLHGNKKDGNAFGWTERYKVAVGVAEALDYLHNSC 450
L G C + + L+ + G L + + +K + G V +A+ ++YL +
Sbjct: 89 LLGICL-TSTVQLIMQLMPFGCLLDYVREHKDN---IGSQYLLNWCVQIAKGMNYLED-- 142
Query: 451 EQPVIHKDVKSSNILLSDDFEPQLSDFGLASWLSTSSSHLTCTDVAGTFGYLAPEYFMHG 510
+ ++H+D+ + N+L+ +++DFGLA L ++A E +H
Sbjct: 143 -RRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHR 201
Query: 511 KVSEKIDVYAFGIVLLELLS-GKKPINS 537
+ + DV+++G+ + EL++ G KP +
Sbjct: 202 IYTHQSDVWSYGVTVWELMTFGSKPYDG 229
>pdb|2ETM|A Chain A, Crystal Structure Of Focal Adhesion Kinase Domain
Complexed With 7h-Pyrrolo [2,3-D] Pyrimidine Derivative
pdb|2ETM|B Chain B, Crystal Structure Of Focal Adhesion Kinase Domain
Complexed With 7h-Pyrrolo [2,3-D] Pyrimidine Derivative
pdb|2IJM|A Chain A, Crystal Structure Of Focal Adhesion Kinase Domain With 2
Molecules In The Asymmetric Unit Complexed With Adp And
Atp
pdb|2IJM|B Chain B, Crystal Structure Of Focal Adhesion Kinase Domain With 2
Molecules In The Asymmetric Unit Complexed With Adp And
Atp
Length = 281
Score = 59.3 bits (142), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 51/205 (24%), Positives = 94/205 (45%), Gaps = 15/205 (7%)
Query: 339 VGKGGHSHVYRGCL--PDGKELAVKILK----PSEDVLKEFASEIEIITALHHRNIISLF 392
+G+G V++G P+ LAV I S+ V ++F E + H +I+ L
Sbjct: 20 IGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLI 79
Query: 393 GFCFEDNNLLLVYDFLSRGSLEENLHGNKKDGNAFGWTERYKVAVGVAEALDYLHNSCEQ 452
G E N + ++ + + G L L K + A ++ AL YL + +
Sbjct: 80 GVITE-NPVWIIMELCTLGELRSFLQVRK---YSLDLASLILYAYQLSTALAYLES---K 132
Query: 453 PVIHKDVKSSNILLSDDFEPQLSDFGLASWLSTSSSHLTCTDVAGTFGYLAPEYFMHGKV 512
+H+D+ + N+L+S + +L DFGL+ ++ S++ + ++APE +
Sbjct: 133 RFVHRDIAARNVLVSSNDCVKLGDFGLSRYME-DSTYYKASKGKLPIKWMAPESINFRRF 191
Query: 513 SEKIDVYAFGIVLLE-LLSGKKPIN 536
+ DV+ FG+ + E L+ G KP
Sbjct: 192 TSASDVWMFGVCMWEILMHGVKPFQ 216
>pdb|3O7L|B Chain B, Crystal Structure Of Phospholamban (1-19):pka
C-Subunit:amp-Pnp:mg2+ Complex
Length = 350
Score = 59.3 bits (142), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 52/191 (27%), Positives = 98/191 (51%), Gaps = 18/191 (9%)
Query: 355 GKELAVKILKPSEDV-LKEFA---SEIEIITALHHRNIISLFGFCFEDN-NLLLVYDFLS 409
G A+KIL + V LK+ +E I+ A++ ++ L F F+DN NL +V ++++
Sbjct: 66 GNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKL-EFSFKDNSNLYMVMEYVA 124
Query: 410 RGSLEENLHGNKKDGNAFGWTERYKVAVGVAEALDYLHNSCEQPVIHKDVKSSNILLSDD 469
G + +L ++ G R+ A + +YLH+ +I++D+K N+++
Sbjct: 125 GGEMFSHL---RRIGRFSEPHARF-YAAQIVLTFEYLHSL---DLIYRDLKPENLIIDQQ 177
Query: 470 FEPQLSDFGLASWLSTSSSHLTCTDVAGTFGYLAPEYFMHGKVSEKIDVYAFGIVLLELL 529
Q++DFG A + + L C GT YLAPE + ++ +D +A G+++ E+
Sbjct: 178 GYIQVTDFGFAKRVKGRTWXL-C----GTPEYLAPEIIISKGYNKAVDWWALGVLIYEMA 232
Query: 530 SGKKPINSENP 540
+G P ++ P
Sbjct: 233 AGYPPFFADQP 243
>pdb|3PXK|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Pyrrolo[2,3- D]thiazole
pdb|3PXK|B Chain B, Focal Adhesion Kinase Catalytic Domain In Complex With
Pyrrolo[2,3- D]thiazole
Length = 282
Score = 59.3 bits (142), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 51/205 (24%), Positives = 94/205 (45%), Gaps = 15/205 (7%)
Query: 339 VGKGGHSHVYRGCL--PDGKELAVKILK----PSEDVLKEFASEIEIITALHHRNIISLF 392
+G+G V++G P+ LAV I S+ V ++F E + H +I+ L
Sbjct: 21 IGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLI 80
Query: 393 GFCFEDNNLLLVYDFLSRGSLEENLHGNKKDGNAFGWTERYKVAVGVAEALDYLHNSCEQ 452
G E N + ++ + + G L L K + A ++ AL YL + +
Sbjct: 81 GVITE-NPVWIIMELCTLGELRSFLQVRK---YSLDLASLILYAYQLSTALAYLES---K 133
Query: 453 PVIHKDVKSSNILLSDDFEPQLSDFGLASWLSTSSSHLTCTDVAGTFGYLAPEYFMHGKV 512
+H+D+ + N+L+S + +L DFGL+ ++ S++ + ++APE +
Sbjct: 134 RFVHRDIAARNVLVSSNDCVKLGDFGLSRYME-DSTYYKASKGKLPIKWMAPESINFRRF 192
Query: 513 SEKIDVYAFGIVLLE-LLSGKKPIN 536
+ DV+ FG+ + E L+ G KP
Sbjct: 193 TSASDVWMFGVCMWEILMHGVKPFQ 217
>pdb|4EOP|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
pdb|4EOP|C Chain C, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
Length = 300
Score = 59.3 bits (142), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 52/200 (26%), Positives = 97/200 (48%), Gaps = 15/200 (7%)
Query: 339 VGKGGHSHVY--RGCLPDGKELAVKILK---PSEDVLKEFASEIEIITALHHRNIISLFG 393
+G+G + VY R L G+ +A+K ++ +E V EI ++ L+H NI+ L
Sbjct: 13 IGEGTYGVVYKARNKL-TGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLD 71
Query: 394 FCFEDNNLLLVYDFLSRGSLEENLHGNKKDGNAFGWTERYKVAVGVAEALDYLHNSCEQP 453
+N L LV++FL + L++ + + G + Y + + L + H+
Sbjct: 72 VIHTENKLYLVFEFLHQ-DLKKFMDASALTGIPLPLIKSY--LFQLLQGLAFCHS---HR 125
Query: 454 VIHKDVKSSNILLSDDFEPQLSDFGLASWLSTSSSHLTCTDVAGTFGYLAPEYFMHGK-V 512
V+H+D+K N+L++ + +L+DFGLA T T Y APE + K
Sbjct: 126 VLHRDLKPENLLINTEGAIKLADFGLARAFGVPVR--TYXHEVVTLWYRAPEILLGCKYY 183
Query: 513 SEKIDVYAFGIVLLELLSGK 532
S +D+++ G + E+++ +
Sbjct: 184 STAVDIWSLGCIFAEMVTRR 203
>pdb|4EOO|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With Atp
pdb|4EOO|C Chain C, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With Atp
Length = 299
Score = 59.3 bits (142), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 52/200 (26%), Positives = 97/200 (48%), Gaps = 15/200 (7%)
Query: 339 VGKGGHSHVY--RGCLPDGKELAVKILK---PSEDVLKEFASEIEIITALHHRNIISLFG 393
+G+G + VY R L G+ +A+K ++ +E V EI ++ L+H NI+ L
Sbjct: 12 IGEGTYGVVYKARNKL-TGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLD 70
Query: 394 FCFEDNNLLLVYDFLSRGSLEENLHGNKKDGNAFGWTERYKVAVGVAEALDYLHNSCEQP 453
+N L LV++FL + L++ + + G + Y + + L + H+
Sbjct: 71 VIHTENKLYLVFEFLHQ-DLKKFMDASALTGIPLPLIKSY--LFQLLQGLAFCHS---HR 124
Query: 454 VIHKDVKSSNILLSDDFEPQLSDFGLASWLSTSSSHLTCTDVAGTFGYLAPEYFMHGK-V 512
V+H+D+K N+L++ + +L+DFGLA T T Y APE + K
Sbjct: 125 VLHRDLKPENLLINTEGAIKLADFGLARAFGVPVR--TYXHEVVTLWYRAPEILLGCKYY 182
Query: 513 SEKIDVYAFGIVLLELLSGK 532
S +D+++ G + E+++ +
Sbjct: 183 STAVDIWSLGCIFAEMVTRR 202
>pdb|2F7E|E Chain E, Pka Complexed With
(S)-2-(1h-Indol-3-Yl)-1-(5-Isoquinolin-6-
Yl-Pyridin-3-Yloxymethyl-Etylamine
pdb|2F7X|E Chain E, Protein Kinase A Bound To
(s)-2-(1h-indol-3-yl)-1-[5-((e)-2-
Pyridin-4-yl-vinyl)-pyridin-3-yloxymethyl]-ethylamine
pdb|2F7Z|E Chain E, Protein Kinase A Bound To
(R)-1-(1h-Indol-3-Ylmethyl)-2-(2-
Pyridin-4-Yl-[1,7]naphtyridin-5-Yloxy)-Ehylamine
pdb|2OH0|E Chain E, Crystal Structure Of Protein Kinase A In Complex With
Pyridine-Pyrazolopyridine Based Inhibitors
pdb|2OJF|E Chain E, Crystal Structure Of Protein Kinase A In Complex With
Pyridine-Pyrazolopyridine Based Inhibitors
Length = 351
Score = 59.3 bits (142), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 52/191 (27%), Positives = 96/191 (50%), Gaps = 18/191 (9%)
Query: 355 GKELAVKILKPSEDV-LKEFA---SEIEIITALHHRNIISLFGFCFEDN-NLLLVYDFLS 409
G A+KIL + V LK+ +E I+ A++ ++ L F F+DN NL +V +++
Sbjct: 67 GNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKL-EFSFKDNSNLYMVMEYVP 125
Query: 410 RGSLEENLHGNKKDGNAFGWTERYKVAVGVAEALDYLHNSCEQPVIHKDVKSSNILLSDD 469
G + +L ++ G R+ A + +YLH+ +I++D+K N+L+
Sbjct: 126 GGEMFSHL---RRIGRFSEPHARF-YAAQIVLTFEYLHSL---DLIYRDLKPENLLIDQQ 178
Query: 470 FEPQLSDFGLASWLSTSSSHLTCTDVAGTFGYLAPEYFMHGKVSEKIDVYAFGIVLLELL 529
Q++DFG A + + L GT YLAPE + ++ +D +A G+++ E+
Sbjct: 179 GYIQVTDFGFAKRVKGRTWTL-----CGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMA 233
Query: 530 SGKKPINSENP 540
+G P ++ P
Sbjct: 234 AGYPPFFADQP 244
>pdb|1E9H|A Chain A, Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex With
The Inhibitor Indirubin-5-Sulphonate Bound
pdb|1E9H|C Chain C, Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex With
The Inhibitor Indirubin-5-Sulphonate Bound
pdb|1PKD|A Chain A, The Crystal Structure Of Ucn-01 In Complex With Phospho-
Cdk2CYCLIN A
pdb|1PKD|C Chain C, The Crystal Structure Of Ucn-01 In Complex With Phospho-
Cdk2CYCLIN A
Length = 297
Score = 59.3 bits (142), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 52/200 (26%), Positives = 97/200 (48%), Gaps = 15/200 (7%)
Query: 339 VGKGGHSHVY--RGCLPDGKELAVKILK---PSEDVLKEFASEIEIITALHHRNIISLFG 393
+G+G + VY R L G+ +A+K ++ +E V EI ++ L+H NI+ L
Sbjct: 11 IGEGTYGVVYKARNKL-TGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLD 69
Query: 394 FCFEDNNLLLVYDFLSRGSLEENLHGNKKDGNAFGWTERYKVAVGVAEALDYLHNSCEQP 453
+N L LV++FL + L++ + + G + Y + + L + H+
Sbjct: 70 VIHTENKLYLVFEFLHQ-DLKKFMDASALTGIPLPLIKSY--LFQLLQGLAFCHS---HR 123
Query: 454 VIHKDVKSSNILLSDDFEPQLSDFGLASWLSTSSSHLTCTDVAGTFGYLAPEYFMHGK-V 512
V+H+D+K N+L++ + +L+DFGLA T T Y APE + K
Sbjct: 124 VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVR--TYXHEVVTLWYRAPEILLGCKYY 181
Query: 513 SEKIDVYAFGIVLLELLSGK 532
S +D+++ G + E+++ +
Sbjct: 182 STAVDIWSLGCIFAEMVTRR 201
>pdb|2J0M|B Chain B, Crystal Structure A Two-Chain Complex Between The Ferm And
Kinase Domains Of Focal Adhesion Kinase.
pdb|2JKQ|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 59.3 bits (142), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 51/205 (24%), Positives = 94/205 (45%), Gaps = 15/205 (7%)
Query: 339 VGKGGHSHVYRGCL--PDGKELAVKILK----PSEDVLKEFASEIEIITALHHRNIISLF 392
+G+G V++G P+ LAV I S+ V ++F E + H +I+ L
Sbjct: 18 IGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLI 77
Query: 393 GFCFEDNNLLLVYDFLSRGSLEENLHGNKKDGNAFGWTERYKVAVGVAEALDYLHNSCEQ 452
G E N + ++ + + G L L K + A ++ AL YL + +
Sbjct: 78 GVITE-NPVWIIMELCTLGELRSFLQVRK---YSLDLASLILYAYQLSTALAYLES---K 130
Query: 453 PVIHKDVKSSNILLSDDFEPQLSDFGLASWLSTSSSHLTCTDVAGTFGYLAPEYFMHGKV 512
+H+D+ + N+L+S + +L DFGL+ ++ S++ + ++APE +
Sbjct: 131 RFVHRDIAARNVLVSSNDCVKLGDFGLSRYME-DSTYYKASKGKLPIKWMAPESINFRRF 189
Query: 513 SEKIDVYAFGIVLLE-LLSGKKPIN 536
+ DV+ FG+ + E L+ G KP
Sbjct: 190 TSASDVWMFGVCMWEILMHGVKPFQ 214
>pdb|2UZT|A Chain A, Pka Structures Of Akt, Indazole-Pyridine Inhibitors
pdb|2UZU|E Chain E, Pka Structures Of Indazole-Pyridine Series Of Akt
Inhibitors
pdb|2UZV|A Chain A, Pka Structures Of Indazole-pyridine Series Of Akt
Inhibitors
pdb|2UZW|E Chain E, Pka Structures Of Indazole-Pyridine Series Of Akt
Inhibitors
Length = 336
Score = 59.3 bits (142), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 52/191 (27%), Positives = 96/191 (50%), Gaps = 18/191 (9%)
Query: 355 GKELAVKILKPSEDV-LKEFA---SEIEIITALHHRNIISLFGFCFEDN-NLLLVYDFLS 409
G A+KIL + V LK+ +E I+ A++ ++ L F F+DN NL +V +++
Sbjct: 52 GNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKL-EFSFKDNSNLYMVMEYVP 110
Query: 410 RGSLEENLHGNKKDGNAFGWTERYKVAVGVAEALDYLHNSCEQPVIHKDVKSSNILLSDD 469
G + +L ++ G R+ A + +YLH+ +I++D+K N+L+
Sbjct: 111 GGEMFSHL---RRIGRFSEPHARF-YAAQIVLTFEYLHSL---DLIYRDLKPENLLIDQQ 163
Query: 470 FEPQLSDFGLASWLSTSSSHLTCTDVAGTFGYLAPEYFMHGKVSEKIDVYAFGIVLLELL 529
Q++DFG A + + L GT YLAPE + ++ +D +A G+++ E+
Sbjct: 164 GYIQVTDFGFAKRVKGRTWTL-----CGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMA 218
Query: 530 SGKKPINSENP 540
+G P ++ P
Sbjct: 219 AGYPPFFADQP 229
>pdb|4I3Z|A Chain A, Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNESIUM
IONS
pdb|4I3Z|C Chain C, Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNESIUM
IONS
Length = 296
Score = 59.3 bits (142), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 52/200 (26%), Positives = 97/200 (48%), Gaps = 15/200 (7%)
Query: 339 VGKGGHSHVY--RGCLPDGKELAVKILK---PSEDVLKEFASEIEIITALHHRNIISLFG 393
+G+G + VY R L G+ +A+K ++ +E V EI ++ L+H NI+ L
Sbjct: 10 IGEGTYGVVYKARNKL-TGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLD 68
Query: 394 FCFEDNNLLLVYDFLSRGSLEENLHGNKKDGNAFGWTERYKVAVGVAEALDYLHNSCEQP 453
+N L LV++FL + L++ + + G + Y + + L + H+
Sbjct: 69 VIHTENKLYLVFEFLHQ-DLKKFMDASALTGIPLPLIKSY--LFQLLQGLAFCHS---HR 122
Query: 454 VIHKDVKSSNILLSDDFEPQLSDFGLASWLSTSSSHLTCTDVAGTFGYLAPEYFMHGK-V 512
V+H+D+K N+L++ + +L+DFGLA T T Y APE + K
Sbjct: 123 VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVR--TYXHEVVTLWYRAPEILLGCKYY 180
Query: 513 SEKIDVYAFGIVLLELLSGK 532
S +D+++ G + E+++ +
Sbjct: 181 STAVDIWSLGCIFAEMVTRR 200
>pdb|4EBW|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With Novel Allosteric Inhibitor
pdb|4EBV|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With Novel Allosteric Inhibitor
Length = 304
Score = 59.3 bits (142), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 51/205 (24%), Positives = 94/205 (45%), Gaps = 15/205 (7%)
Query: 339 VGKGGHSHVYRGCL--PDGKELAVKILK----PSEDVLKEFASEIEIITALHHRNIISLF 392
+G+G V++G P+ LAV I S+ V ++F E + H +I+ L
Sbjct: 46 IGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLI 105
Query: 393 GFCFEDNNLLLVYDFLSRGSLEENLHGNKKDGNAFGWTERYKVAVGVAEALDYLHNSCEQ 452
G E N + ++ + + G L L K + A ++ AL YL + +
Sbjct: 106 GVITE-NPVWIIMELCTLGELRSFLQVRKY---SLDLASLILYAYQLSTALAYLES---K 158
Query: 453 PVIHKDVKSSNILLSDDFEPQLSDFGLASWLSTSSSHLTCTDVAGTFGYLAPEYFMHGKV 512
+H+D+ + N+L+S + +L DFGL+ ++ S++ + ++APE +
Sbjct: 159 RFVHRDIAARNVLVSSNDCVKLGDFGLSRYME-DSTYYKASKGKLPIKWMAPESINFRRF 217
Query: 513 SEKIDVYAFGIVLLE-LLSGKKPIN 536
+ DV+ FG+ + E L+ G KP
Sbjct: 218 TSASDVWMFGVCMWEILMHGVKPFQ 242
>pdb|2EB3|A Chain A, Crystal Structure Of Mutated Egfr Kinase Domain (L858r) In
Complex With Amppnp
Length = 334
Score = 59.3 bits (142), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 46/208 (22%), Positives = 100/208 (48%), Gaps = 15/208 (7%)
Query: 338 LVGKGGHSHVYRGC-LPDGKEL----AVKILK--PSEDVLKEFASEIEIITALHHRNIIS 390
++G G VY+G +P+G+++ A+K L+ S KE E ++ ++ + ++
Sbjct: 29 VLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCR 88
Query: 391 LFGFCFEDNNLLLVYDFLSRGSLEENLHGNKKDGNAFGWTERYKVAVGVAEALDYLHNSC 450
L G C + + L+ + G L + + +K + G V +A+ ++YL +
Sbjct: 89 LLGICL-TSTVQLITQLMPFGCLLDYVREHKDN---IGSQYLLNWCVQIAKGMNYLED-- 142
Query: 451 EQPVIHKDVKSSNILLSDDFEPQLSDFGLASWLSTSSSHLTCTDVAGTFGYLAPEYFMHG 510
+ ++H+D+ + N+L+ +++DFG A L ++A E +H
Sbjct: 143 -RRLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGGKVPIKWMALESILHR 201
Query: 511 KVSEKIDVYAFGIVLLELLS-GKKPINS 537
+ + DV+++G+ + EL++ G KP +
Sbjct: 202 IYTHQSDVWSYGVTVWELMTFGSKPYDG 229
>pdb|1MP8|A Chain A, Crystal Structure Of Focal Adhesion Kinase (Fak)
pdb|4I4F|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With An Allosteric Binding Pyrazolobenzothiazine
Compound
Length = 281
Score = 59.3 bits (142), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 51/205 (24%), Positives = 94/205 (45%), Gaps = 15/205 (7%)
Query: 339 VGKGGHSHVYRGCL--PDGKELAVKILK----PSEDVLKEFASEIEIITALHHRNIISLF 392
+G+G V++G P+ LAV I S+ V ++F E + H +I+ L
Sbjct: 23 IGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLI 82
Query: 393 GFCFEDNNLLLVYDFLSRGSLEENLHGNKKDGNAFGWTERYKVAVGVAEALDYLHNSCEQ 452
G E N + ++ + + G L L K + A ++ AL YL + +
Sbjct: 83 GVITE-NPVWIIMELCTLGELRSFLQVRK---YSLDLASLILYAYQLSTALAYLES---K 135
Query: 453 PVIHKDVKSSNILLSDDFEPQLSDFGLASWLSTSSSHLTCTDVAGTFGYLAPEYFMHGKV 512
+H+D+ + N+L+S + +L DFGL+ ++ S++ + ++APE +
Sbjct: 136 RFVHRDIAARNVLVSSNDCVKLGDFGLSRYME-DSTYYKASKGKLPIKWMAPESINFRRF 194
Query: 513 SEKIDVYAFGIVLLE-LLSGKKPIN 536
+ DV+ FG+ + E L+ G KP
Sbjct: 195 TSASDVWMFGVCMWEILMHGVKPFQ 219
>pdb|3BZ3|A Chain A, Crystal Structure Analysis Of Focal Adhesion Kinase With A
Methanesulfonamide Diaminopyrimidine Inhibitor
Length = 276
Score = 59.3 bits (142), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 51/205 (24%), Positives = 94/205 (45%), Gaps = 15/205 (7%)
Query: 339 VGKGGHSHVYRGCL--PDGKELAVKILK----PSEDVLKEFASEIEIITALHHRNIISLF 392
+G+G V++G P+ LAV I S+ V ++F E + H +I+ L
Sbjct: 15 IGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLI 74
Query: 393 GFCFEDNNLLLVYDFLSRGSLEENLHGNKKDGNAFGWTERYKVAVGVAEALDYLHNSCEQ 452
G E N + ++ + + G L L K + A ++ AL YL + +
Sbjct: 75 GVITE-NPVWIIMELCTLGELRSFLQVRK---YSLDLASLILYAYQLSTALAYLES---K 127
Query: 453 PVIHKDVKSSNILLSDDFEPQLSDFGLASWLSTSSSHLTCTDVAGTFGYLAPEYFMHGKV 512
+H+D+ + N+L+S + +L DFGL+ ++ S++ + ++APE +
Sbjct: 128 RFVHRDIAARNVLVSSNDCVKLGDFGLSRYME-DSTYYKASKGKLPIKWMAPESINFRRF 186
Query: 513 SEKIDVYAFGIVLLE-LLSGKKPIN 536
+ DV+ FG+ + E L+ G KP
Sbjct: 187 TSASDVWMFGVCMWEILMHGVKPFQ 211
>pdb|1OGU|A Chain A, Structure Of Human Thr160-phospho Cdk2/cyclin A Complexed
With A
2-arylamino-4-cyclohexylmethyl-5-nitroso-6-
aminopyrimidine Inhibitor
pdb|1OGU|C Chain C, Structure Of Human Thr160-phospho Cdk2/cyclin A Complexed
With A
2-arylamino-4-cyclohexylmethyl-5-nitroso-6-
aminopyrimidine Inhibitor
pdb|1OI9|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OI9|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIU|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIU|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIY|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIY|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
Length = 302
Score = 58.9 bits (141), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 52/200 (26%), Positives = 97/200 (48%), Gaps = 15/200 (7%)
Query: 339 VGKGGHSHVY--RGCLPDGKELAVKILK---PSEDVLKEFASEIEIITALHHRNIISLFG 393
+G+G + VY R L G+ +A+K ++ +E V EI ++ L+H NI+ L
Sbjct: 14 IGEGTYGVVYKARNKL-TGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLD 72
Query: 394 FCFEDNNLLLVYDFLSRGSLEENLHGNKKDGNAFGWTERYKVAVGVAEALDYLHNSCEQP 453
+N L LV++FL + L++ + + G + Y + + L + H+
Sbjct: 73 VIHTENKLYLVFEFLHQ-DLKKFMDASALTGIPLPLIKSY--LFQLLQGLAFCHS---HR 126
Query: 454 VIHKDVKSSNILLSDDFEPQLSDFGLASWLSTSSSHLTCTDVAGTFGYLAPEYFMHGK-V 512
V+H+D+K N+L++ + +L+DFGLA T T Y APE + K
Sbjct: 127 VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVR--TYXHEVVTLWYRAPEILLGCKYY 184
Query: 513 SEKIDVYAFGIVLLELLSGK 532
S +D+++ G + E+++ +
Sbjct: 185 STAVDIWSLGCIFAEMVTRR 204
>pdb|2W96|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 58.9 bits (141), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 50/223 (22%), Positives = 94/223 (42%), Gaps = 22/223 (9%)
Query: 329 ATSNFLPEYLVGKGGHSHVYRGCLPDGKEL----AVKILKPSEDVLKEFASEIEIIT--- 381
ATS + P +G G + VY+ P +V++ E + E+ ++
Sbjct: 2 ATSRYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGEEGLPISTVREVALLRRLE 61
Query: 382 ALHHRNIISLFGFCF-----EDNNLLLVYDFLSRGSLEENLHGNKKDGNAFGWTERYKVA 436
A H N++ L C + + LV++ + + + + +K +
Sbjct: 62 AFEHPNVVRLMDVCATSRTDREIKVTLVFEHVDQ---DLRTYLDKAPPPGLPAETIKDLM 118
Query: 437 VGVAEALDYLHNSCEQPVIHKDVKSSNILLSDDFEPQLSDFGLASWLSTSSSHLTCTDVA 496
LD+LH +C ++H+D+K NIL++ +L+DFGLA S + V
Sbjct: 119 RQFLRGLDFLHANC---IVHRDLKPENILVTSGGTVKLADFGLA---RIYSYQMALDPVV 172
Query: 497 GTFGYLAPEYFMHGKVSEKIDVYAFGIVLLELLSGKKPINSEN 539
T Y APE + + +D+++ G + E+ +KP+ N
Sbjct: 173 VTLWYRAPEVLLQSTYATPVDMWSVGCIFAEMFR-RKPLFCGN 214
>pdb|4A4X|A Chain A, Nek2-Ede Bound To Cct248662
Length = 279
Score = 58.9 bits (141), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 58/234 (24%), Positives = 100/234 (42%), Gaps = 18/234 (7%)
Query: 354 DGKELAVKIL---KPSEDVLKEFASEIEIITALHHRNIISLFGFCFEDNN--LLLVYDFL 408
DGK L K L +E + SE+ ++ L H NI+ + + N L +V ++
Sbjct: 30 DGKILVWKELDYGSMTEAEKQMLVSEVNLLRELKHPNIVRYYDRIIDRTNTTLYIVMEYC 89
Query: 409 SRGSLEENLHGNKKDGNAFGWTERYKVAVGVAEALDYLHNSCE--QPVIHKDVKSSNILL 466
G L + K+ +V + AL H + V+H+D+K +N+ L
Sbjct: 90 EGGDLASVITKGTKERQYLDEEFVLRVMTQLTLALKECHRRSDGGHTVLHRDLKPANVFL 149
Query: 467 SDDFEPQLSDFGLASWLSTSSSHLTCTDVAGTFGYLAPEYFMHGKVSEKIDVYAFGIVLL 526
+L DFGLA L+ + GT Y++PE +EK D+++ G +L
Sbjct: 150 DGKQNVKLGDFGLARILNHDEDF--AKEFVGTPYYMSPEQMNRMSYNEKSDIWSLGCLLY 207
Query: 527 ELLSGKKPINSENPKGQESLVMWAKPILKDGKVSQLLDPSLDTDYDNDQIERMV 580
EL + P + + K + ++GK ++ P +D N+ I RM+
Sbjct: 208 ELCALMPPFTAFSQKELAGKI-------REGKFRRI--PYRYSDELNEIITRML 252
>pdb|2JGZ|A Chain A, Crystal Structure Of Phospho-Cdk2 In Complex With Cyclin B
Length = 289
Score = 58.9 bits (141), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 52/200 (26%), Positives = 97/200 (48%), Gaps = 15/200 (7%)
Query: 339 VGKGGHSHVY--RGCLPDGKELAVKILK---PSEDVLKEFASEIEIITALHHRNIISLFG 393
+G+G + VY R L G+ +A+K ++ +E V EI ++ L+H NI+ L
Sbjct: 11 IGEGTYGVVYKARNKL-TGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLD 69
Query: 394 FCFEDNNLLLVYDFLSRGSLEENLHGNKKDGNAFGWTERYKVAVGVAEALDYLHNSCEQP 453
+N L LV++FL + L++ + + G + Y + + L + H+
Sbjct: 70 VIHTENKLYLVFEFLHQ-DLKKFMDASALTGIPLPLIKSY--LFQLLQGLAFCHS---HR 123
Query: 454 VIHKDVKSSNILLSDDFEPQLSDFGLASWLSTSSSHLTCTDVAGTFGYLAPEYFMHGK-V 512
V+H+D+K N+L++ + +L+DFGLA T T Y APE + K
Sbjct: 124 VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVR--TYXHEVVTLWYRAPEILLGCKYY 181
Query: 513 SEKIDVYAFGIVLLELLSGK 532
S +D+++ G + E+++ +
Sbjct: 182 STAVDIWSLGCIFAEMVTRR 201
>pdb|3VW6|A Chain A, Crystal Structure Of Human Apoptosis Signal-Regulating
Kinase 1 (Ask1) With Imidazopyridine Inhibitor
pdb|3VW6|B Chain B, Crystal Structure Of Human Apoptosis Signal-Regulating
Kinase 1 (Ask1) With Imidazopyridine Inhibitor
Length = 269
Score = 58.9 bits (141), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 55/209 (26%), Positives = 99/209 (47%), Gaps = 23/209 (11%)
Query: 338 LVGKGGHSHVYRGC-LPDGKELAVKILKPSED--VLKEFASEIEIITALHHRNIISLFGF 394
++GKG + VY G L + +A+K + P D + EI + L H+NI+ G
Sbjct: 15 VLGKGTYGIVYAGRDLSNQVRIAIKEI-PERDSRYSQPLHEEIALHKHLKHKNIVQYLGS 73
Query: 395 CFEDNNLLLVYDFLSRGSLEENLHGN----KKDGNAFGWTERYKVAVGVAEALDYLHNSC 450
E+ + + + + GSL L K + G+ + + E L YLH++
Sbjct: 74 FSENGFIKIFMEQVPGGSLSALLRSKWGPLKDNEQTIGFYTKQ-----ILEGLKYLHDN- 127
Query: 451 EQPVIHKDVKSSNILLSD-DFEPQLSDFGLASWLSTSSSHLTCTDV-AGTFGYLAPEYFM 508
++H+D+K N+L++ ++SDFG + L+ + CT+ GT Y+APE
Sbjct: 128 --QIVHRDIKGDNVLINTYSGVLKISDFGTSKRLAGINP---CTETFTGTLQYMAPEIID 182
Query: 509 HGK--VSEKIDVYAFGIVLLELLSGKKPI 535
G + D+++ G ++E+ +GK P
Sbjct: 183 KGPRGYGKAADIWSLGCTIIEMATGKPPF 211
>pdb|2ITT|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Aee788
pdb|2ITU|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Afn941
pdb|2ITV|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Amp-pnp
pdb|2ITZ|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Iressa
Length = 327
Score = 58.9 bits (141), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 46/208 (22%), Positives = 100/208 (48%), Gaps = 15/208 (7%)
Query: 338 LVGKGGHSHVYRGC-LPDGKEL----AVKILK--PSEDVLKEFASEIEIITALHHRNIIS 390
++G G VY+G +P+G+++ A+K L+ S KE E ++ ++ + ++
Sbjct: 22 VLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCR 81
Query: 391 LFGFCFEDNNLLLVYDFLSRGSLEENLHGNKKDGNAFGWTERYKVAVGVAEALDYLHNSC 450
L G C + + L+ + G L + + +K + G V +A+ ++YL +
Sbjct: 82 LLGICL-TSTVQLITQLMPFGCLLDYVREHKDN---IGSQYLLNWCVQIAKGMNYLED-- 135
Query: 451 EQPVIHKDVKSSNILLSDDFEPQLSDFGLASWLSTSSSHLTCTDVAGTFGYLAPEYFMHG 510
+ ++H+D+ + N+L+ +++DFG A L ++A E +H
Sbjct: 136 -RRLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGGKVPIKWMALESILHR 194
Query: 511 KVSEKIDVYAFGIVLLELLS-GKKPINS 537
+ + DV+++G+ + EL++ G KP +
Sbjct: 195 IYTHQSDVWSYGVTVWELMTFGSKPYDG 222
>pdb|4EXU|A Chain A, Mapk13, Inactive Form
pdb|4EYJ|A Chain A, Mapk13 Complex With Inhibitor
pdb|4EYM|A Chain A, Mapk13 Complex With Inhibitor
Length = 371
Score = 58.9 bits (141), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 51/185 (27%), Positives = 94/185 (50%), Gaps = 19/185 (10%)
Query: 355 GKELAVKIL-KP--SEDVLKEFASEIEIITALHHRNIISLFGFCFEDNNLLLVYDF-LSR 410
G+++A+K L +P SE K E+ ++ + H N+I L ++L YDF L
Sbjct: 67 GEKVAIKKLSRPFQSEIFAKRAYRELLLLKHMQHENVIGLLDVFTPASSLRNFYDFYLVM 126
Query: 411 GSLEENLHGNKKDGNAFGWTERYKVAVGVAEALDYLHNSCEQPVIHKDVKSSNILLSDDF 470
++ +L K G F + + + + L Y+H++ V+H+D+K N+ +++D
Sbjct: 127 PFMQTDL--QKIMGMEFSEEKIQYLVYQMLKGLKYIHSAG---VVHRDLKPGNLAVNEDC 181
Query: 471 EPQLSDFGLASWLSTSSSHLTCTDVAGTFGYLAPEY---FMHGKVSEKIDVYAFGIVLLE 527
E ++ DFGLA + T T Y APE +MH ++ +D+++ G ++ E
Sbjct: 182 ELKILDFGLA-----RHADAEMTGYVVTRWYRAPEVILSWMH--YNQTVDIWSVGCIMAE 234
Query: 528 LLSGK 532
+L+GK
Sbjct: 235 MLTGK 239
>pdb|1GZN|A Chain A, Structure Of Pkb Kinase Domain
Length = 335
Score = 58.9 bits (141), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 49/201 (24%), Positives = 96/201 (47%), Gaps = 19/201 (9%)
Query: 355 GKELAVKILKP----SEDVLKEFASEIEIITALHHRNIISLFGFCFEDNN-LLLVYDFLS 409
G+ A+KIL+ ++D + +E ++ H + +L + F+ ++ L V ++ +
Sbjct: 30 GRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPFLTAL-KYAFQTHDRLCFVMEYAN 88
Query: 410 RGSLEENLHGNKKDGNAFGWTERYKVAVG--VAEALDYLHNSCEQPVIHKDVKSSNILLS 467
G L +L + +TE G + AL+YLH+ + V+++D+K N++L
Sbjct: 89 GGELFFHLSRERV------FTEERARFYGAEIVSALEYLHS---RDVVYRDIKLENLMLD 139
Query: 468 DDFEPQLSDFGLASWLSTSSSHLTCTDVAGTFGYLAPEYFMHGKVSEKIDVYAFGIVLLE 527
D +++DFGL S T GT YLAPE +D + G+V+ E
Sbjct: 140 KDGHIKITDFGLCK--EGISDGATMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYE 197
Query: 528 LLSGKKPINSENPKGQESLVM 548
++ G+ P +++ + L++
Sbjct: 198 MMCGRLPFYNQDHERLFELIL 218
>pdb|1CDK|A Chain A, Camp-Dependent Protein Kinase Catalytic Subunit
(E.C.2.7.1.37) (Protein Kinase A) Complexed With Protein
Kinase Inhibitor Peptide Fragment 5-24 (Pki(5-24)
Isoelectric Variant Ca) And Mn2+ Adenylyl
Imidodiphosphate (Mnamp-Pnp) At Ph 5.6 And 7c And 4c
pdb|1CDK|B Chain B, Camp-Dependent Protein Kinase Catalytic Subunit
(E.C.2.7.1.37) (Protein Kinase A) Complexed With Protein
Kinase Inhibitor Peptide Fragment 5-24 (Pki(5-24)
Isoelectric Variant Ca) And Mn2+ Adenylyl
Imidodiphosphate (Mnamp-Pnp) At Ph 5.6 And 7c And 4c
Length = 350
Score = 58.9 bits (141), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 51/191 (26%), Positives = 96/191 (50%), Gaps = 18/191 (9%)
Query: 355 GKELAVKILKPSEDV-LKEFA---SEIEIITALHHRNIISLFGFCFEDN-NLLLVYDFLS 409
G A+KIL + V LK+ +E I+ A++ ++ L + F+DN NL +V +++
Sbjct: 66 GNHFAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKL-EYSFKDNSNLYMVMEYVP 124
Query: 410 RGSLEENLHGNKKDGNAFGWTERYKVAVGVAEALDYLHNSCEQPVIHKDVKSSNILLSDD 469
G + +L ++ G R+ A + +YLH+ +I++D+K N+L+
Sbjct: 125 GGEMFSHL---RRIGRFSEPHARF-YAAQIVLTFEYLHSL---DLIYRDLKPENLLIDQQ 177
Query: 470 FEPQLSDFGLASWLSTSSSHLTCTDVAGTFGYLAPEYFMHGKVSEKIDVYAFGIVLLELL 529
Q++DFG A + + L GT YLAPE + ++ +D +A G+++ E+
Sbjct: 178 GYIQVTDFGFAKRVKGRTWXL-----CGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMA 232
Query: 530 SGKKPINSENP 540
+G P ++ P
Sbjct: 233 AGYPPFFADQP 243
>pdb|1O6L|A Chain A, Crystal Structure Of An Activated Akt/protein Kinase B
(pkb-pif Chimera) Ternary Complex With Amp-pnp And Gsk3
Peptide
Length = 337
Score = 58.9 bits (141), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 49/201 (24%), Positives = 96/201 (47%), Gaps = 19/201 (9%)
Query: 355 GKELAVKILKP----SEDVLKEFASEIEIITALHHRNIISLFGFCFEDNN-LLLVYDFLS 409
G+ A+KIL+ ++D + +E ++ H + +L + F+ ++ L V ++ +
Sbjct: 30 GRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPFLTAL-KYAFQTHDRLCFVMEYAN 88
Query: 410 RGSLEENLHGNKKDGNAFGWTERYKVAVG--VAEALDYLHNSCEQPVIHKDVKSSNILLS 467
G L +L + +TE G + AL+YLH+ + V+++D+K N++L
Sbjct: 89 GGELFFHLSRERV------FTEERARFYGAEIVSALEYLHS---RDVVYRDIKLENLMLD 139
Query: 468 DDFEPQLSDFGLASWLSTSSSHLTCTDVAGTFGYLAPEYFMHGKVSEKIDVYAFGIVLLE 527
D +++DFGL S T GT YLAPE +D + G+V+ E
Sbjct: 140 KDGHIKITDFGLCK--EGISDGATMKXFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYE 197
Query: 528 LLSGKKPINSENPKGQESLVM 548
++ G+ P +++ + L++
Sbjct: 198 MMCGRLPFYNQDHERLFELIL 218
>pdb|3QHR|A Chain A, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHR|C Chain C, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHW|A Chain A, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHW|C Chain C, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
Length = 298
Score = 58.9 bits (141), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 52/200 (26%), Positives = 97/200 (48%), Gaps = 15/200 (7%)
Query: 339 VGKGGHSHVY--RGCLPDGKELAVKILK---PSEDVLKEFASEIEIITALHHRNIISLFG 393
+G+G + VY R L G+ +A+K ++ +E V EI ++ L+H NI+ L
Sbjct: 12 IGEGTYGVVYKARNKL-TGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLD 70
Query: 394 FCFEDNNLLLVYDFLSRGSLEENLHGNKKDGNAFGWTERYKVAVGVAEALDYLHNSCEQP 453
+N L LV++FL + L++ + + G + Y + + L + H+
Sbjct: 71 VIHTENKLYLVFEFLHQ-DLKKFMDASALTGIPLPLIKSY--LFQLLQGLAFCHS---HR 124
Query: 454 VIHKDVKSSNILLSDDFEPQLSDFGLASWLSTSSSHLTCTDVAGTFGYLAPEYFMHGK-V 512
V+H+D+K N+L++ + +L+DFGLA T T Y APE + K
Sbjct: 125 VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVR--TYXHEVVTLWYRAPEILLGCKYY 182
Query: 513 SEKIDVYAFGIVLLELLSGK 532
S +D+++ G + E+++ +
Sbjct: 183 STAVDIWSLGCIFAEMVTRR 202
>pdb|1O6K|A Chain A, Structure Of Activated Form Of Pkb Kinase Domain S474d
With Gsk3 Peptide And Amp-Pnp
Length = 336
Score = 58.9 bits (141), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 49/201 (24%), Positives = 96/201 (47%), Gaps = 19/201 (9%)
Query: 355 GKELAVKILKP----SEDVLKEFASEIEIITALHHRNIISLFGFCFEDNN-LLLVYDFLS 409
G+ A+KIL+ ++D + +E ++ H + +L + F+ ++ L V ++ +
Sbjct: 30 GRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPFLTAL-KYAFQTHDRLCFVMEYAN 88
Query: 410 RGSLEENLHGNKKDGNAFGWTERYKVAVG--VAEALDYLHNSCEQPVIHKDVKSSNILLS 467
G L +L + +TE G + AL+YLH+ + V+++D+K N++L
Sbjct: 89 GGELFFHLSRERV------FTEERARFYGAEIVSALEYLHS---RDVVYRDIKLENLMLD 139
Query: 468 DDFEPQLSDFGLASWLSTSSSHLTCTDVAGTFGYLAPEYFMHGKVSEKIDVYAFGIVLLE 527
D +++DFGL S T GT YLAPE +D + G+V+ E
Sbjct: 140 KDGHIKITDFGLCK--EGISDGATMKXFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYE 197
Query: 528 LLSGKKPINSENPKGQESLVM 548
++ G+ P +++ + L++
Sbjct: 198 MMCGRLPFYNQDHERLFELIL 218
>pdb|2EB2|A Chain A, Crystal Structure Of Mutated Egfr Kinase Domain (G719s)
Length = 334
Score = 58.9 bits (141), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 46/208 (22%), Positives = 100/208 (48%), Gaps = 15/208 (7%)
Query: 338 LVGKGGHSHVYRGC-LPDGKEL----AVKILK--PSEDVLKEFASEIEIITALHHRNIIS 390
++ G VY+G +P+G+++ A+K L+ S KE E ++ ++ + ++
Sbjct: 29 VLSSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCR 88
Query: 391 LFGFCFEDNNLLLVYDFLSRGSLEENLHGNKKDGNAFGWTERYKVAVGVAEALDYLHNSC 450
L G C + + L+ + G L + + +K + G V +A+ ++YL +
Sbjct: 89 LLGICL-TSTVQLITQLMPFGCLLDYVREHKDN---IGSQYLLNWCVQIAKGMNYLED-- 142
Query: 451 EQPVIHKDVKSSNILLSDDFEPQLSDFGLASWLSTSSSHLTCTDVAGTFGYLAPEYFMHG 510
+ ++H+D+ + N+L+ +++DFGLA L ++A E +H
Sbjct: 143 -RRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHR 201
Query: 511 KVSEKIDVYAFGIVLLELLS-GKKPINS 537
+ + DV+++G+ + EL++ G KP +
Sbjct: 202 IYTHQSDVWSYGVTVWELMTFGSKPYDG 229
>pdb|2ITN|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Amp-Pnp
pdb|2ITO|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Iressa
pdb|2ITP|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Aee788
pdb|2ITQ|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Afn941
Length = 327
Score = 58.9 bits (141), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 46/207 (22%), Positives = 100/207 (48%), Gaps = 15/207 (7%)
Query: 338 LVGKGGHSHVYRGC-LPDGKEL----AVKILK--PSEDVLKEFASEIEIITALHHRNIIS 390
++ G VY+G +P+G+++ A+K L+ S KE E ++ ++ + ++
Sbjct: 22 VLSSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCR 81
Query: 391 LFGFCFEDNNLLLVYDFLSRGSLEENLHGNKKDGNAFGWTERYKVAVGVAEALDYLHNSC 450
L G C + + L+ + G L + + +K + G V +A+ ++YL +
Sbjct: 82 LLGICL-TSTVQLITQLMPFGCLLDYVREHKDN---IGSQYLLNWCVQIAKGMNYLED-- 135
Query: 451 EQPVIHKDVKSSNILLSDDFEPQLSDFGLASWLSTSSSHLTCTDVAGTFGYLAPEYFMHG 510
+ ++H+D+ + N+L+ +++DFGLA L ++A E +H
Sbjct: 136 -RRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHR 194
Query: 511 KVSEKIDVYAFGIVLLELLS-GKKPIN 536
+ + DV+++G+ + EL++ G KP +
Sbjct: 195 IYTHQSDVWSYGVTVWELMTFGSKPYD 221
>pdb|1CTP|E Chain E, Structure Of The Mammalian Catalytic Subunit Of
Camp-Dependent Protein Kinase And An Inhibitor Peptide
Displays An Open Conformation
Length = 350
Score = 58.9 bits (141), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 51/191 (26%), Positives = 96/191 (50%), Gaps = 18/191 (9%)
Query: 355 GKELAVKILKPSEDV-LKEFA---SEIEIITALHHRNIISLFGFCFEDN-NLLLVYDFLS 409
G A+KIL + V LK+ +E I+ A++ ++ L + F+DN NL +V +++
Sbjct: 66 GNHFAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKL-EYSFKDNSNLYMVMEYVP 124
Query: 410 RGSLEENLHGNKKDGNAFGWTERYKVAVGVAEALDYLHNSCEQPVIHKDVKSSNILLSDD 469
G + +L ++ G R+ A + +YLH+ +I++D+K N+L+
Sbjct: 125 GGEMFSHL---RRIGRFSEPHARF-YAAQIVLTFEYLHSL---DLIYRDLKPENLLIDQQ 177
Query: 470 FEPQLSDFGLASWLSTSSSHLTCTDVAGTFGYLAPEYFMHGKVSEKIDVYAFGIVLLELL 529
Q++DFG A + + L GT YLAPE + ++ +D +A G+++ E+
Sbjct: 178 GYIQVTDFGFAKRVKGRTWXL-----CGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMA 232
Query: 530 SGKKPINSENP 540
+G P ++ P
Sbjct: 233 AGYPPFFADQP 243
>pdb|2JDO|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With
Isoquinoline-5- Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl) Amide
pdb|2JDR|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With The Inhibitor
A- 443654
pdb|2UW9|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With 4-(4-Chloro-
Phenyl)-4-(4-(1h-Pyrazol-4-Yl)-Phenyl)-Piperidine
pdb|2X39|A Chain A, Structure Of
4-Amino-N-(4-Chlorobenzyl)-1-(7h-Pyrrolo(2,3-D)
Pyrimidin-4-Yl)piperidine-4-Carboxamide Bound To Pkb
pdb|2XH5|A Chain A, Structure Of 4-(4-Tert-Butylbenzyl)-1-(7h-Pyrrolo(2,3-D)
Pyrimidin-4-Yl)piperidin-4-Amine Bound To Pkb
Length = 342
Score = 58.9 bits (141), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 49/201 (24%), Positives = 96/201 (47%), Gaps = 19/201 (9%)
Query: 355 GKELAVKILKP----SEDVLKEFASEIEIITALHHRNIISLFGFCFEDNN-LLLVYDFLS 409
G+ A+KIL+ ++D + +E ++ H + +L + F+ ++ L V ++ +
Sbjct: 35 GRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPFLTAL-KYAFQTHDRLCFVMEYAN 93
Query: 410 RGSLEENLHGNKKDGNAFGWTERYKVAVG--VAEALDYLHNSCEQPVIHKDVKSSNILLS 467
G L +L + +TE G + AL+YLH+ + V+++D+K N++L
Sbjct: 94 GGELFFHLSRERV------FTEERARFYGAEIVSALEYLHS---RDVVYRDIKLENLMLD 144
Query: 468 DDFEPQLSDFGLASWLSTSSSHLTCTDVAGTFGYLAPEYFMHGKVSEKIDVYAFGIVLLE 527
D +++DFGL S T GT YLAPE +D + G+V+ E
Sbjct: 145 KDGHIKITDFGLCK--EGISDGATMKXFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYE 202
Query: 528 LLSGKKPINSENPKGQESLVM 548
++ G+ P +++ + L++
Sbjct: 203 MMCGRLPFYNQDHERLFELIL 223
>pdb|1GZK|A Chain A, Molecular Mechanism For The Regulation Of Protein Kinase B
Akt By Hydrophobic Motif Phosphorylation
pdb|1GZO|A Chain A, Structure Of Protein Kinase B Unphosphorylated
Length = 315
Score = 58.9 bits (141), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 49/201 (24%), Positives = 96/201 (47%), Gaps = 19/201 (9%)
Query: 355 GKELAVKILKP----SEDVLKEFASEIEIITALHHRNIISLFGFCFEDNN-LLLVYDFLS 409
G+ A+KIL+ ++D + +E ++ H + +L + F+ ++ L V ++ +
Sbjct: 30 GRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPFLTAL-KYAFQTHDRLCFVMEYAN 88
Query: 410 RGSLEENLHGNKKDGNAFGWTERYKVAVG--VAEALDYLHNSCEQPVIHKDVKSSNILLS 467
G L +L + +TE G + AL+YLH+ + V+++D+K N++L
Sbjct: 89 GGELFFHLSRERV------FTEERARFYGAEIVSALEYLHS---RDVVYRDIKLENLMLD 139
Query: 468 DDFEPQLSDFGLASWLSTSSSHLTCTDVAGTFGYLAPEYFMHGKVSEKIDVYAFGIVLLE 527
D +++DFGL S T GT YLAPE +D + G+V+ E
Sbjct: 140 KDGHIKITDFGLCK--EGISDGATMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYE 197
Query: 528 LLSGKKPINSENPKGQESLVM 548
++ G+ P +++ + L++
Sbjct: 198 MMCGRLPFYNQDHERLFELIL 218
>pdb|2W9F|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 58.9 bits (141), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 50/223 (22%), Positives = 94/223 (42%), Gaps = 22/223 (9%)
Query: 329 ATSNFLPEYLVGKGGHSHVYRGCLPDGKEL----AVKILKPSEDVLKEFASEIEIIT--- 381
ATS + P +G G + VY+ P +V++ E + E+ ++
Sbjct: 2 ATSRYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGEEGLPISTVREVALLRRLE 61
Query: 382 ALHHRNIISLFGFCF-----EDNNLLLVYDFLSRGSLEENLHGNKKDGNAFGWTERYKVA 436
A H N++ L C + + LV++ + + + + +K +
Sbjct: 62 AFEHPNVVRLMDVCATSRTDREIKVTLVFEHVDQ---DLRTYLDKAPPPGLPAETIKDLM 118
Query: 437 VGVAEALDYLHNSCEQPVIHKDVKSSNILLSDDFEPQLSDFGLASWLSTSSSHLTCTDVA 496
LD+LH +C ++H+D+K NIL++ +L+DFGLA S + V
Sbjct: 119 RQFLRGLDFLHANC---IVHRDLKPENILVTSGGTVKLADFGLA---RIYSYQMALFPVV 172
Query: 497 GTFGYLAPEYFMHGKVSEKIDVYAFGIVLLELLSGKKPINSEN 539
T Y APE + + +D+++ G + E+ +KP+ N
Sbjct: 173 VTLWYRAPEVLLQSTYATPVDMWSVGCIFAEMFR-RKPLFCGN 214
>pdb|1CMK|E Chain E, Crystal Structures Of The Myristylated Catalytic Subunit
Of Camp- Dependent Protein Kinase Reveal Open And Closed
Conformations
Length = 350
Score = 58.9 bits (141), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 51/191 (26%), Positives = 96/191 (50%), Gaps = 18/191 (9%)
Query: 355 GKELAVKILKPSEDV-LKEFA---SEIEIITALHHRNIISLFGFCFEDN-NLLLVYDFLS 409
G A+KIL + V LK+ +E I+ A++ ++ L + F+DN NL +V +++
Sbjct: 66 GNHFAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKL-EYSFKDNSNLYMVMEYVP 124
Query: 410 RGSLEENLHGNKKDGNAFGWTERYKVAVGVAEALDYLHNSCEQPVIHKDVKSSNILLSDD 469
G + +L ++ G R+ A + +YLH+ +I++D+K N+L+
Sbjct: 125 GGEMFSHL---RRIGRFSEPHARF-YAAQIVLTFEYLHSL---DLIYRDLKPENLLIDQQ 177
Query: 470 FEPQLSDFGLASWLSTSSSHLTCTDVAGTFGYLAPEYFMHGKVSEKIDVYAFGIVLLELL 529
Q++DFG A + + L GT YLAPE + ++ +D +A G+++ E+
Sbjct: 178 GYIQVTDFGFAKRVKGRTWXL-----CGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMA 232
Query: 530 SGKKPINSENP 540
+G P ++ P
Sbjct: 233 AGYPPFFADQP 243
>pdb|1MRV|A Chain A, Crystal Structure Of An Inactive Akt2 Kinase Domain
pdb|1MRY|A Chain A, Crystal Structure Of An Inactive Akt2 Kinase Domain
Length = 339
Score = 58.9 bits (141), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 49/201 (24%), Positives = 96/201 (47%), Gaps = 19/201 (9%)
Query: 355 GKELAVKILKP----SEDVLKEFASEIEIITALHHRNIISLFGFCFEDNN-LLLVYDFLS 409
G+ A+KIL+ ++D + +E ++ H + +L + F+ ++ L V ++ +
Sbjct: 33 GRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPFLTAL-KYAFQTHDRLCFVMEYAN 91
Query: 410 RGSLEENLHGNKKDGNAFGWTERYKVAVG--VAEALDYLHNSCEQPVIHKDVKSSNILLS 467
G L +L + +TE G + AL+YLH+ + V+++D+K N++L
Sbjct: 92 GGELFFHLSRERV------FTEERARFYGAEIVSALEYLHS---RDVVYRDIKLENLMLD 142
Query: 468 DDFEPQLSDFGLASWLSTSSSHLTCTDVAGTFGYLAPEYFMHGKVSEKIDVYAFGIVLLE 527
D +++DFGL S T GT YLAPE +D + G+V+ E
Sbjct: 143 KDGHIKITDFGLCK--EGISDGATMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYE 200
Query: 528 LLSGKKPINSENPKGQESLVM 548
++ G+ P +++ + L++
Sbjct: 201 MMCGRLPFYNQDHERLFELIL 221
>pdb|3E87|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E87|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E88|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E88|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E8D|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E8D|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3D0E|A Chain A, Crystal Structure Of Human Akt2 In Complex With Gsk690693
pdb|3D0E|B Chain B, Crystal Structure Of Human Akt2 In Complex With Gsk690693
Length = 335
Score = 58.9 bits (141), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 49/201 (24%), Positives = 96/201 (47%), Gaps = 19/201 (9%)
Query: 355 GKELAVKILKP----SEDVLKEFASEIEIITALHHRNIISLFGFCFEDNN-LLLVYDFLS 409
G+ A+KIL+ ++D + +E ++ H + +L + F+ ++ L V ++ +
Sbjct: 30 GRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPFLTAL-KYAFQTHDRLCFVMEYAN 88
Query: 410 RGSLEENLHGNKKDGNAFGWTERYKVAVG--VAEALDYLHNSCEQPVIHKDVKSSNILLS 467
G L +L + +TE G + AL+YLH+ + V+++D+K N++L
Sbjct: 89 GGELFFHLSRERV------FTEERARFYGAEIVSALEYLHS---RDVVYRDIKLENLMLD 139
Query: 468 DDFEPQLSDFGLASWLSTSSSHLTCTDVAGTFGYLAPEYFMHGKVSEKIDVYAFGIVLLE 527
D +++DFGL S T GT YLAPE +D + G+V+ E
Sbjct: 140 KDGHIKITDFGLCK--EGISDGATMKXFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYE 197
Query: 528 LLSGKKPINSENPKGQESLVM 548
++ G+ P +++ + L++
Sbjct: 198 MMCGRLPFYNQDHERLFELIL 218
>pdb|1BI8|A Chain A, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structures Cdk6-P19ink4d Inhibitor Complex
pdb|1BI8|C Chain C, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structures Cdk6-P19ink4d Inhibitor Complex
pdb|1BI7|A Chain A, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structure Of The Cdk6-P16ink4a Tumor Suppressor
Complex
pdb|1BLX|A Chain A, P19ink4dCDK6 COMPLEX
pdb|1G3N|A Chain A, Structure Of A P18(Ink4c)-Cdk6-K-Cyclin Ternary Complex
pdb|1G3N|E Chain E, Structure Of A P18(Ink4c)-Cdk6-K-Cyclin Ternary Complex
Length = 326
Score = 58.9 bits (141), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 53/211 (25%), Positives = 96/211 (45%), Gaps = 25/211 (11%)
Query: 339 VGKGGHSHVYRGC-LPDGKELA----VKILKPSEDVLKEFASEIEIITALH---HRNIIS 390
+G+G + V++ L +G V++ E + E+ ++ L H N++
Sbjct: 19 IGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHLETFEHPNVVR 78
Query: 391 LFGFCF-----EDNNLLLVYDFLSRGSLEENLHGNKKDGNAFGWTERYK-VAVGVAEALD 444
LF C + L LV++ + + L L + G TE K + + LD
Sbjct: 79 LFDVCTVSRTDRETKLTLVFEHVDQ-DLTTYLDKVPEPGVP---TETIKDMMFQLLRGLD 134
Query: 445 YLHNSCEQPVIHKDVKSSNILLSDDFEPQLSDFGLASWLSTSSSHLTCTDVAGTFGYLAP 504
+LH+ V+H+D+K NIL++ + +L+DFGLA S + T V T Y AP
Sbjct: 135 FLHS---HRVVHRDLKPQNILVTSSGQIKLADFGLA---RIYSFQMALTSVVVTLWYRAP 188
Query: 505 EYFMHGKVSEKIDVYAFGIVLLELLSGKKPI 535
E + + +D+++ G + E+ +KP+
Sbjct: 189 EVLLQSSYATPVDLWSVGCIFAEMFR-RKPL 218
>pdb|1JOW|B Chain B, Crystal Structure Of A Complex Of Human Cdk6 And A Viral
Cyclin
pdb|1XO2|B Chain B, Crystal Structure Of A Human Cyclin-Dependent Kinase 6
Complex With A Flavonol Inhibitor, Fisetin
pdb|2EUF|B Chain B, X-Ray Structure Of Human Cdk6-Vcyclin In Complex With The
Inhibitor Pd0332991
pdb|2F2C|B Chain B, X-Ray Structure Of Human Cdk6-Vcyclinwith The Inhibitor
Aminopurvalanol
Length = 308
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 53/211 (25%), Positives = 96/211 (45%), Gaps = 25/211 (11%)
Query: 339 VGKGGHSHVYRGC-LPDGKELA----VKILKPSEDVLKEFASEIEIITALH---HRNIIS 390
+G+G + V++ L +G V++ E + E+ ++ L H N++
Sbjct: 19 IGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHLETFEHPNVVR 78
Query: 391 LFGFCF-----EDNNLLLVYDFLSRGSLEENLHGNKKDGNAFGWTERYK-VAVGVAEALD 444
LF C + L LV++ + + L L + G TE K + + LD
Sbjct: 79 LFDVCTVSRTDRETKLTLVFEHVDQ-DLTTYLDKVPEPGVP---TETIKDMMFQLLRGLD 134
Query: 445 YLHNSCEQPVIHKDVKSSNILLSDDFEPQLSDFGLASWLSTSSSHLTCTDVAGTFGYLAP 504
+LH+ V+H+D+K NIL++ + +L+DFGLA S + T V T Y AP
Sbjct: 135 FLHS---HRVVHRDLKPQNILVTSSGQIKLADFGLA---RIYSFQMALTSVVVTLWYRAP 188
Query: 505 EYFMHGKVSEKIDVYAFGIVLLELLSGKKPI 535
E + + +D+++ G + E+ +KP+
Sbjct: 189 EVLLQSSYATPVDLWSVGCIFAEMFR-RKPL 218
>pdb|3PFQ|A Chain A, Crystal Structure And Allosteric Activation Of Protein
Kinase C Beta Ii
Length = 674
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 55/216 (25%), Positives = 102/216 (47%), Gaps = 21/216 (9%)
Query: 332 NFLPEYLVGKGGHSHVYRGCLPDGKEL-AVKILKP----SEDVLKEFASEIEIITALHHR 386
NFL ++GKG V EL AVKILK +D ++ E ++
Sbjct: 344 NFL--MVLGKGSFGKVMLSERKGTDELYAVKILKKDVVIQDDDVECTMVEKRVLALPGKP 401
Query: 387 NIISLFGFCFED-NNLLLVYDFLSRGSLEENLH--GNKKDGNAFGWTERYKVAVGVAEAL 443
++ CF+ + L V ++++ G L ++ G K+ +A + A +A L
Sbjct: 402 PFLTQLHSCFQTMDRLYFVMEYVNGGDLMYHIQQVGRFKEPHAVFY------AAEIAIGL 455
Query: 444 DYLHNSCEQPVIHKDVKSSNILLSDDFEPQLSDFGLASWLSTSSSHLTCTDVAGTFGYLA 503
+L + + +I++D+K N++L + +++DFG+ +T GT Y+A
Sbjct: 456 FFLQS---KGIIYRDLKLDNVMLDSEGHIKIADFGMCK--ENIWDGVTTKXFCGTPDYIA 510
Query: 504 PEYFMHGKVSEKIDVYAFGIVLLELLSGKKPINSEN 539
PE + + +D +AFG++L E+L+G+ P E+
Sbjct: 511 PEIIAYQPYGKSVDWWAFGVLLYEMLAGQAPFEGED 546
>pdb|2Z8C|A Chain A, Phosphorylated Insulin Receptor Tyrosine Kinase In Complex
With (4-{[5-Carbamoyl-4-(3-Methylanilino)pyrimidin-2-
Yl]amino}phenyl)acetic Acid
Length = 303
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 46/206 (22%), Positives = 93/206 (45%), Gaps = 17/206 (8%)
Query: 339 VGKGGHSHVYRGCLPD------GKELAVKILKPSEDVLK--EFASEIEIITALHHRNIIS 390
+G+G VY G D +AVK + S + + EF +E ++ +++
Sbjct: 22 LGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVVR 81
Query: 391 LFGFCFEDNNLLLVYDFLSRGSLEENLHGNKKDG-NAFG-----WTERYKVAVGVAEALD 444
L G + L+V + ++ G L+ L + + N G E ++A +A+ +
Sbjct: 82 LLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGMA 141
Query: 445 YLHNSCEQPVIHKDVKSSNILLSDDFEPQLSDFGLASWLSTSSSHLTCTDVAGTFGYLAP 504
YL+ + +H+D+ + N +++ DF ++ DFG+ + + ++AP
Sbjct: 142 YLN---AKKFVHRDLAARNCMVAHDFTVKIGDFGMTRDIXETDXXRKGGKGLLPVRWMAP 198
Query: 505 EYFMHGKVSEKIDVYAFGIVLLELLS 530
E G + D+++FG+VL E+ S
Sbjct: 199 ESLKDGVFTTSSDMWSFGVVLWEITS 224
>pdb|1IRK|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Human Insulin Receptor
Length = 306
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 46/206 (22%), Positives = 94/206 (45%), Gaps = 17/206 (8%)
Query: 339 VGKGGHSHVYRGCLPD------GKELAVKILKPSEDVLK--EFASEIEIITALHHRNIIS 390
+G+G VY G D +AVK + S + + EF +E ++ +++
Sbjct: 25 LGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVVR 84
Query: 391 LFGFCFEDNNLLLVYDFLSRGSLEENLHGNKKDG-NAFG-----WTERYKVAVGVAEALD 444
L G + L+V + ++ G L+ L + + N G E ++A +A+ +
Sbjct: 85 LLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGMA 144
Query: 445 YLHNSCEQPVIHKDVKSSNILLSDDFEPQLSDFGLASWLSTSSSHLTCTDVAGTFGYLAP 504
YL+ + +H+D+ + N +++ DF ++ DFG+ + + + ++AP
Sbjct: 145 YLN---AKKFVHRDLAARNCMVAHDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMAP 201
Query: 505 EYFMHGKVSEKIDVYAFGIVLLELLS 530
E G + D+++FG+VL E+ S
Sbjct: 202 ESLKDGVFTTSSDMWSFGVVLWEITS 227
>pdb|3COI|A Chain A, Crystal Structure Of P38delta Kinase
Length = 353
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 51/185 (27%), Positives = 94/185 (50%), Gaps = 19/185 (10%)
Query: 355 GKELAVKIL-KP--SEDVLKEFASEIEIITALHHRNIISLFGFCFEDNNLLLVYDF-LSR 410
G+++A+K L +P SE K E+ ++ + H N+I L ++L YDF L
Sbjct: 49 GEKVAIKKLSRPFQSEIFAKRAYRELLLLKHMQHENVIGLLDVFTPASSLRNFYDFYLVM 108
Query: 411 GSLEENLHGNKKDGNAFGWTERYKVAVGVAEALDYLHNSCEQPVIHKDVKSSNILLSDDF 470
++ +L K G F + + + + L Y+H++ V+H+D+K N+ +++D
Sbjct: 109 PFMQTDL--QKIMGLKFSEEKIQYLVYQMLKGLKYIHSAG---VVHRDLKPGNLAVNEDC 163
Query: 471 EPQLSDFGLASWLSTSSSHLTCTDVAGTFGYLAPEY---FMHGKVSEKIDVYAFGIVLLE 527
E ++ DFGLA + T T Y APE +MH ++ +D+++ G ++ E
Sbjct: 164 ELKILDFGLA-----RHADAEMTGYVVTRWYRAPEVILSWMH--YNQTVDIWSVGCIMAE 216
Query: 528 LLSGK 532
+L+GK
Sbjct: 217 MLTGK 221
>pdb|1RQQ|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With The Sh2 Domain Of Aps
pdb|1RQQ|B Chain B, Crystal Structure Of The Insulin Receptor Kinase In
Complex With The Sh2 Domain Of Aps
pdb|2AUH|A Chain A, Crystal Structure Of The Grb14 Bps Region In Complex With
The Insulin Receptor Tyrosine Kinase
pdb|2B4S|B Chain B, Crystal Structure Of A Complex Between Ptp1b And The
Insulin Receptor Tyrosine Kinase
pdb|2B4S|D Chain D, Crystal Structure Of A Complex Between Ptp1b And The
Insulin Receptor Tyrosine Kinase
pdb|3BU3|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Peptide
pdb|3BU5|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Peptide And Atp
pdb|3BU6|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Phosphopeptide
Length = 306
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 46/206 (22%), Positives = 93/206 (45%), Gaps = 17/206 (8%)
Query: 339 VGKGGHSHVYRGCLPD------GKELAVKILKPSEDVLK--EFASEIEIITALHHRNIIS 390
+G+G VY G D +AVK + S + + EF +E ++ +++
Sbjct: 25 LGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVVR 84
Query: 391 LFGFCFEDNNLLLVYDFLSRGSLEENLHGNKKDG-NAFG-----WTERYKVAVGVAEALD 444
L G + L+V + ++ G L+ L + + N G E ++A +A+ +
Sbjct: 85 LLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGMA 144
Query: 445 YLHNSCEQPVIHKDVKSSNILLSDDFEPQLSDFGLASWLSTSSSHLTCTDVAGTFGYLAP 504
YL+ + +H+D+ + N +++ DF ++ DFG+ + + ++AP
Sbjct: 145 YLN---AKKFVHRDLAARNCMVAHDFTVKIGDFGMTRDIXETDXXRKGGKGLLPVRWMAP 201
Query: 505 EYFMHGKVSEKIDVYAFGIVLLELLS 530
E G + D+++FG+VL E+ S
Sbjct: 202 ESLKDGVFTTSSDMWSFGVVLWEITS 227
>pdb|3NUP|A Chain A, Cdk6 (Monomeric) In Complex With Inhibitor
pdb|3NUX|A Chain A, Cdk6 (Monomeric) In Complex With Inhibitor
pdb|4AUA|A Chain A, Liganded X-ray Crystal Structure Of Cyclin Dependent
Kinase 6 (cdk6)
pdb|4EZ5|A Chain A, Cdk6 (monomeric) In Complex With Inhibitor
Length = 307
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 53/211 (25%), Positives = 96/211 (45%), Gaps = 25/211 (11%)
Query: 339 VGKGGHSHVYRGC-LPDGKELA----VKILKPSEDVLKEFASEIEIITALH---HRNIIS 390
+G+G + V++ L +G V++ E + E+ ++ L H N++
Sbjct: 19 IGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHLETFEHPNVVR 78
Query: 391 LFGFCF-----EDNNLLLVYDFLSRGSLEENLHGNKKDGNAFGWTERYK-VAVGVAEALD 444
LF C + L LV++ + + L L + G TE K + + LD
Sbjct: 79 LFDVCTVSRTDRETKLTLVFEHVDQ-DLTTYLDKVPEPGVP---TETIKDMMFQLLRGLD 134
Query: 445 YLHNSCEQPVIHKDVKSSNILLSDDFEPQLSDFGLASWLSTSSSHLTCTDVAGTFGYLAP 504
+LH+ V+H+D+K NIL++ + +L+DFGLA S + T V T Y AP
Sbjct: 135 FLHS---HRVVHRDLKPQNILVTSSGQIKLADFGLA---RIYSFQMALTSVVVTLWYRAP 188
Query: 505 EYFMHGKVSEKIDVYAFGIVLLELLSGKKPI 535
E + + +D+++ G + E+ +KP+
Sbjct: 189 EVLLQSSYATPVDLWSVGCIFAEMFR-RKPL 218
>pdb|3ETA|A Chain A, Kinase Domain Of Insulin Receptor Complexed With A Pyrrolo
Pyridine Inhibitor
pdb|3ETA|B Chain B, Kinase Domain Of Insulin Receptor Complexed With A Pyrrolo
Pyridine Inhibitor
Length = 317
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 46/206 (22%), Positives = 94/206 (45%), Gaps = 17/206 (8%)
Query: 339 VGKGGHSHVYRGCLPD------GKELAVKILKPSEDVLK--EFASEIEIITALHHRNIIS 390
+G+G VY G D +AVK + S + + EF +E ++ +++
Sbjct: 24 LGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVVR 83
Query: 391 LFGFCFEDNNLLLVYDFLSRGSLEENLHGNKKDG-NAFG-----WTERYKVAVGVAEALD 444
L G + L+V + ++ G L+ L + + N G E ++A +A+ +
Sbjct: 84 LLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGMA 143
Query: 445 YLHNSCEQPVIHKDVKSSNILLSDDFEPQLSDFGLASWLSTSSSHLTCTDVAGTFGYLAP 504
YL+ + +H+D+ + N +++ DF ++ DFG+ + + + ++AP
Sbjct: 144 YLN---AKKFVHRDLAARNCMVAHDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMAP 200
Query: 505 EYFMHGKVSEKIDVYAFGIVLLELLS 530
E G + D+++FG+VL E+ S
Sbjct: 201 ESLKDGVFTTSSDMWSFGVVLWEITS 226
>pdb|2IW6|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW6|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW9|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW9|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
Length = 302
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 52/200 (26%), Positives = 96/200 (48%), Gaps = 15/200 (7%)
Query: 339 VGKGGHSHVY--RGCLPDGKELAVKILK---PSEDVLKEFASEIEIITALHHRNIISLFG 393
+G+G + VY R L G+ +A+K ++ +E V EI ++ L+H NI+ L
Sbjct: 14 IGEGTYGVVYKARNKL-TGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLD 72
Query: 394 FCFEDNNLLLVYDFLSRGSLEENLHGNKKDGNAFGWTERYKVAVGVAEALDYLHNSCEQP 453
+N L LV++FL + L+ + + G + Y + + L + H+
Sbjct: 73 VIHTENKLYLVFEFLHQ-DLKTFMDASALTGIPLPLIKSY--LFQLLQGLAFCHS---HR 126
Query: 454 VIHKDVKSSNILLSDDFEPQLSDFGLASWLSTSSSHLTCTDVAGTFGYLAPEYFMHGK-V 512
V+H+D+K N+L++ + +L+DFGLA T T Y APE + K
Sbjct: 127 VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVR--TYXHEVVTLWYRAPEILLGCKYY 184
Query: 513 SEKIDVYAFGIVLLELLSGK 532
S +D+++ G + E+++ +
Sbjct: 185 STAVDIWSLGCIFAEMVTRR 204
>pdb|2JKM|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 50/205 (24%), Positives = 94/205 (45%), Gaps = 15/205 (7%)
Query: 339 VGKGGHSHVYRGCL--PDGKELAVKILK----PSEDVLKEFASEIEIITALHHRNIISLF 392
+G+G V++G P+ +AV I S+ V ++F E + H +I+ L
Sbjct: 18 IGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLI 77
Query: 393 GFCFEDNNLLLVYDFLSRGSLEENLHGNKKDGNAFGWTERYKVAVGVAEALDYLHNSCEQ 452
G E N + ++ + + G L L K + A ++ AL YL + +
Sbjct: 78 GVITE-NPVWIIMELCTLGELRSFLQVRK---YSLDLASLILYAYQLSTALAYLES---K 130
Query: 453 PVIHKDVKSSNILLSDDFEPQLSDFGLASWLSTSSSHLTCTDVAGTFGYLAPEYFMHGKV 512
+H+D+ + N+L+S + +L DFGL+ ++ S++ + ++APE +
Sbjct: 131 RFVHRDIAARNVLVSSNDCVKLGDFGLSRYME-DSTYYKASKGKLPIKWMAPESINFRRF 189
Query: 513 SEKIDVYAFGIVLLE-LLSGKKPIN 536
+ DV+ FG+ + E L+ G KP
Sbjct: 190 TSASDVWMFGVCMWEILMHGVKPFQ 214
>pdb|2H34|A Chain A, Apoenzyme Crystal Structure Of The Tuberculosis
SerineTHREONINE Kinase, Pkne
pdb|2H34|B Chain B, Apoenzyme Crystal Structure Of The Tuberculosis
SerineTHREONINE Kinase, Pkne
Length = 309
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 34/85 (40%), Positives = 45/85 (52%), Gaps = 3/85 (3%)
Query: 456 HKDVKSSNILLSDDFEPQLSDFGLASWLSTSSSHLT-CTDVAGTFGYLAPEYFMHGKVSE 514
H+DVK NIL+S D L DFG+AS +T+ LT + GT Y APE F +
Sbjct: 157 HRDVKPENILVSADDFAYLVDFGIAS--ATTDEKLTQLGNTVGTLYYXAPERFSESHATY 214
Query: 515 KIDVYAFGIVLLELLSGKKPINSEN 539
+ D+YA VL E L+G P +
Sbjct: 215 RADIYALTCVLYECLTGSPPYQGDQ 239
>pdb|1XH9|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 53/191 (27%), Positives = 97/191 (50%), Gaps = 18/191 (9%)
Query: 355 GKELAVKILKPSEDV-LKEFA---SEIEIITALHHRNIISLFGFCFEDN-NLLLVYDFLS 409
G A+KIL + V LKE +E I+ A++ ++ L F F+DN NL +V ++
Sbjct: 66 GNHYAMKILDKQKVVKLKEIEHTLNEKRILQAVNFPFLVKL-EFSFKDNSNLYMVMEYAP 124
Query: 410 RGSLEENLHGNKKDGNAFGWTERYKVAVGVAEALDYLHNSCEQPVIHKDVKSSNILLSDD 469
G + +L ++ G R+ A + +YLH+ +I++D+K N+++
Sbjct: 125 GGEMFSHL---RRIGRFSEPHARF-YAAQIVLTFEYLHSL---DLIYRDLKPENLMIDQQ 177
Query: 470 FEPQLSDFGLASWLSTSSSHLTCTDVAGTFGYLAPEYFMHGKVSEKIDVYAFGIVLLELL 529
+++DFGLA + + L C GT YLAPE + ++ +D +A G+++ E+
Sbjct: 178 GYIKVTDFGLAKRVKGRTWXL-C----GTPEYLAPEIILSKGYNKAVDWWALGVLIYEMA 232
Query: 530 SGKKPINSENP 540
+G P ++ P
Sbjct: 233 AGYPPFFADQP 243
>pdb|1IR3|A Chain A, Phosphorylated Insulin Receptor Tyrosine Kinase In Complex
With Peptide Substrate And Atp Analog
pdb|1GAG|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With A Bisubstrate Inhibitor
Length = 306
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 46/206 (22%), Positives = 93/206 (45%), Gaps = 17/206 (8%)
Query: 339 VGKGGHSHVYRGCLPD------GKELAVKILKPSEDVLK--EFASEIEIITALHHRNIIS 390
+G+G VY G D +AVK + S + + EF +E ++ +++
Sbjct: 25 LGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVVR 84
Query: 391 LFGFCFEDNNLLLVYDFLSRGSLEENLHGNKKDG-NAFG-----WTERYKVAVGVAEALD 444
L G + L+V + ++ G L+ L + + N G E ++A +A+ +
Sbjct: 85 LLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGMA 144
Query: 445 YLHNSCEQPVIHKDVKSSNILLSDDFEPQLSDFGLASWLSTSSSHLTCTDVAGTFGYLAP 504
YL+ + +H+D+ + N +++ DF ++ DFG+ + + ++AP
Sbjct: 145 YLN---AKKFVHRDLAARNCMVAHDFTVKIGDFGMTRDIXETDXXRKGGKGLLPVRWMAP 201
Query: 505 EYFMHGKVSEKIDVYAFGIVLLELLS 530
E G + D+++FG+VL E+ S
Sbjct: 202 ESLKDGVFTTSSDMWSFGVVLWEITS 227
>pdb|2F2U|A Chain A, Crystal Structure Of The Rho-Kinase Kinase Domain
pdb|2F2U|B Chain B, Crystal Structure Of The Rho-Kinase Kinase Domain
pdb|2H9V|A Chain A, Structural Basis For Induced-Fit Binding Of Rho-Kinase To
The Inhibitor Y27632
Length = 402
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 54/201 (26%), Positives = 91/201 (45%), Gaps = 17/201 (8%)
Query: 356 KELAVKILKPSEDVLKE----FASEIEIITALHHRNIISLFGFCFEDNNLLLVYDFLSRG 411
K A+K+L E + + F E +I+ + ++ LF +D L +V +++ G
Sbjct: 101 KVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANSPWVVQLFCAFQDDKYLYMVMEYMPGG 160
Query: 412 SLEENLHGNKKDGNAFGWTERYKVAVGVAEALDYLHNSCEQPVIHKDVKSSNILLSDDFE 471
L NL N W + Y V +A LD +H+ +IH+DVK N+LL
Sbjct: 161 DLV-NLMSNYDVPEK--WAKFYTAEVVLA--LDAIHS---MGLIHRDVKPDNMLLDKHGH 212
Query: 472 PQLSDFGLASWLSTSSSHLTCTDVAGTFGYLAPEYFM----HGKVSEKIDVYAFGIVLLE 527
+L+DFG + + + C GT Y++PE G + D ++ G+ L E
Sbjct: 213 LKLADFGTCMKMD-ETGMVHCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLFE 271
Query: 528 LLSGKKPINSENPKGQESLVM 548
+L G P +++ G S +M
Sbjct: 272 MLVGDTPFYADSLVGTYSKIM 292
>pdb|1KOB|A Chain A, Twitchin Kinase Fragment (Aplysia), Autoregulated Protein
Kinase Domain
pdb|1KOB|B Chain B, Twitchin Kinase Fragment (Aplysia), Autoregulated Protein
Kinase Domain
Length = 387
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 51/175 (29%), Positives = 81/175 (46%), Gaps = 27/175 (15%)
Query: 375 SEIEIITALHHRNIISLFGFCFEDN-NLLLVYDFLSRGSLEENLHGNKKDGNAFGWTERY 433
+EI I+ LHH +I+L FED ++L+ +FLS G L + + E Y
Sbjct: 97 NEISIMNQLHHPKLINLHD-AFEDKYEMVLILEFLSGGELFDRIAA-----------EDY 144
Query: 434 KVAVGVAEALDYLHNSC-------EQPVIHKDVKSSNILLSDDFEP--QLSDFGLASWLS 484
K++ AE ++Y+ +C E ++H D+K NI+ ++ DFGLA+ L+
Sbjct: 145 KMS--EAEVINYMRQACEGLKHMHEHSIVHLDIKPENIMCETKKASSVKIIDFGLATKLN 202
Query: 485 TSSSHLTCTDVAGTFGYLAPEYFMHGKVSEKIDVYAFGIVLLELLSGKKPINSEN 539
T T + APE V D++A G++ LLSG P E+
Sbjct: 203 PDEIVKVTT---ATAEFAAPEIVDREPVGFYTDMWAIGVLGYVLLSGLSPFAGED 254
>pdb|3QAM|E Chain E, Crystal Structure Of Glu208ala Mutant Of Catalytic Subunit
Of Camp- Dependent Protein Kinase
Length = 350
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 52/191 (27%), Positives = 97/191 (50%), Gaps = 18/191 (9%)
Query: 355 GKELAVKILKPSEDV-LKEFA---SEIEIITALHHRNIISLFGFCFEDN-NLLLVYDFLS 409
G A+KIL + V LK+ +E I+ A++ ++ L F F+DN NL +V ++++
Sbjct: 66 GNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKL-EFSFKDNSNLYMVMEYVA 124
Query: 410 RGSLEENLHGNKKDGNAFGWTERYKVAVGVAEALDYLHNSCEQPVIHKDVKSSNILLSDD 469
G + +L ++ G R+ A + +YLH+ +I++D+K N+L+
Sbjct: 125 GGEMFSHL---RRIGRFSEPHARF-YAAQIVLTFEYLHSL---DLIYRDLKPENLLIDQQ 177
Query: 470 FEPQLSDFGLASWLSTSSSHLTCTDVAGTFGYLAPEYFMHGKVSEKIDVYAFGIVLLELL 529
Q++DFG A + + L C GT YLAP + ++ +D +A G+++ E+
Sbjct: 178 GYIQVTDFGFAKRVKGRTWXL-C----GTPEYLAPAIILSKGYNKAVDWWALGVLIYEMA 232
Query: 530 SGKKPINSENP 540
+G P ++ P
Sbjct: 233 AGYPPFFADQP 243
>pdb|3MDY|A Chain A, Crystal Structure Of The Cytoplasmic Domain Of The Bone
Morp Protein Receptor Type-1b (Bmpr1b) In Complex With
Fkbp12 An 193189
pdb|3MDY|C Chain C, Crystal Structure Of The Cytoplasmic Domain Of The Bone
Morp Protein Receptor Type-1b (Bmpr1b) In Complex With
Fkbp12 An 193189
Length = 337
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 58/210 (27%), Positives = 94/210 (44%), Gaps = 29/210 (13%)
Query: 339 VGKGGHSHVYRGCLPDGKELAVKILKPSEDVLKEFASEIEIITALHHRNIISLFGFCFED 398
+GKG + V+ G G+++AVK+ +E+ +EI + H NI+ GF D
Sbjct: 45 IGKGRYGEVWMGKW-RGEKVAVKVFFTTEEASWFRETEIYQTVLMRHENIL---GFIAAD 100
Query: 399 -------NNLLLVYDFLSRGSLEENLHGNKKDGNAFGWTERYKVAVGVAEALDYLHNSC- 450
L L+ D+ GSL + L D + K+A L +LH
Sbjct: 101 IKGTGSWTQLYLITDYHENGSLYDYLKSTTLDAKSM-----LKLAYSSVSGLCHLHTEIF 155
Query: 451 ---EQPVI-HKDVKSSNILLSDDFEPQLSDFGLA-SWLS-TSSSHLTCTDVAGTFGYLAP 504
+P I H+D+KS NIL+ + ++D GLA ++S T+ + GT Y+ P
Sbjct: 156 STQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVKFISDTNEVDIPPNTRVGTKRYMPP 215
Query: 505 EYF------MHGKVSEKIDVYAFGIVLLEL 528
E H + D+Y+FG++L E+
Sbjct: 216 EVLDESLNRNHFQSYIMADMYSFGLILWEV 245
>pdb|4G3D|A Chain A, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|B Chain B, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|D Chain D, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|E Chain E, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
Length = 371
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 62/205 (30%), Positives = 99/205 (48%), Gaps = 24/205 (11%)
Query: 339 VGKGGHSHVYRGCLPD---GKELAVKILKPSEDVLKEF-ASEIEIITALHHRNIISLFGF 394
+G+G V+R + D G + AVK ++ L+ F A E+ L I+ L+G
Sbjct: 101 LGRGSFGEVHR--MEDKQTGFQCAVKKVR-----LEVFRAEELMACAGLTSPRIVPLYGA 153
Query: 395 CFEDNNLLLVYDFLSRGSLEENLHGNKKDGNAFGWTERYKVAVGVA-EALDYLHNSCEQP 453
E + + + L GSL + + K+ G +R +G A E L+YLH+ +
Sbjct: 154 VREGPWVNIFMELLEGGSLGQLV---KEQGCLP--EDRALYYLGQALEGLEYLHS---RR 205
Query: 454 VIHKDVKSSNILLSDDF-EPQLSDFGLASWLST---SSSHLTCTDVAGTFGYLAPEYFMH 509
++H DVK+ N+LLS D L DFG A L S LT + GT ++APE +
Sbjct: 206 ILHGDVKADNVLLSSDGSHAALCDFGHAVCLQPDGLGKSLLTGDYIPGTETHMAPEVVLG 265
Query: 510 GKVSEKIDVYAFGIVLLELLSGKKP 534
K+DV++ ++L +L+G P
Sbjct: 266 RSCDAKVDVWSSCCMMLHMLNGCHP 290
>pdb|4G3F|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 2-(aminothiazoly)phenol (cmp2)
Length = 336
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 62/205 (30%), Positives = 97/205 (47%), Gaps = 24/205 (11%)
Query: 339 VGKGGHSHVYRGCLPD---GKELAVKILKPSEDVLKEF-ASEIEIITALHHRNIISLFGF 394
VG+G V+R + D G + AVK ++ L+ F E+ L I+ L+G
Sbjct: 66 VGRGSFGEVHR--MKDKQTGFQCAVKKVR-----LEVFRVEELVACAGLSSPRIVPLYGA 118
Query: 395 CFEDNNLLLVYDFLSRGSLEENLHGNKKDGNAFGWTERYKVAVGVA-EALDYLHNSCEQP 453
E + + + L GSL + + K+ G +R +G A E L+YLH +
Sbjct: 119 VREGPWVNIFMELLEGGSLGQLI---KQMGCLP--EDRALYYLGQALEGLEYLHT---RR 170
Query: 454 VIHKDVKSSNILLSDDF-EPQLSDFGLASWL---STSSSHLTCTDVAGTFGYLAPEYFMH 509
++H DVK+ N+LLS D L DFG A L S LT + GT ++APE M
Sbjct: 171 ILHGDVKADNVLLSSDGSRAALCDFGHALCLQPDGLGKSLLTGDYIPGTETHMAPEVVMG 230
Query: 510 GKVSEKIDVYAFGIVLLELLSGKKP 534
K+D+++ ++L +L+G P
Sbjct: 231 KPCDAKVDIWSSCCMMLHMLNGCHP 255
>pdb|3FPQ|A Chain A, Crystal Structure Of The Kinase Domain Of Wnk1
pdb|3FPQ|B Chain B, Crystal Structure Of The Kinase Domain Of Wnk1
Length = 290
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 57/209 (27%), Positives = 90/209 (43%), Gaps = 27/209 (12%)
Query: 339 VGKGGHSHVYRGCLPDGK------ELAVKILKPSEDVLKEFASEIEIITALHHRNIISLF 392
+G+G VY+G + EL + L SE + F E E + L H NI+ +
Sbjct: 34 IGRGSFKTVYKGLDTETTVEVAWCELQDRKLTKSER--QRFKEEAEXLKGLQHPNIVRFY 91
Query: 393 ----GFCFEDNNLLLVYDFLSRGSLEENLHGNK--KDGNAFGWTERYKVAVGVAEALDYL 446
++LV + + G+L+ L K K W + + + L +L
Sbjct: 92 DSWESTVKGKKCIVLVTELXTSGTLKTYLKRFKVXKIKVLRSWCRQ------ILKGLQFL 145
Query: 447 HNSCEQPVIHKDVKSSNILLSDDF-EPQLSDFGLASWLSTSSSHLTCTDVAGTFGYLAPE 505
H P+IH+D+K NI ++ ++ D GLA+ S + V GT + APE
Sbjct: 146 HTRT-PPIIHRDLKCDNIFITGPTGSVKIGDLGLATLKRASFAKA----VIGTPEFXAPE 200
Query: 506 YFMHGKVSEKIDVYAFGIVLLELLSGKKP 534
+ K E +DVYAFG LE + + P
Sbjct: 201 XYEE-KYDESVDVYAFGXCXLEXATSEYP 228
>pdb|2GNG|A Chain A, Protein Kinase A Fivefold Mutant Model Of Rho-Kinase
pdb|2GNH|A Chain A, Pka Five Fold Mutant Model Of Rho-Kinase With H1152p
pdb|2GNI|A Chain A, Pka Fivefold Mutant Model Of Rho-Kinase With Inhibitor
Fasudil (Ha1077)
Length = 350
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 52/191 (27%), Positives = 97/191 (50%), Gaps = 18/191 (9%)
Query: 355 GKELAVKILKPSEDV-LKEFA---SEIEIITALHHRNIISLFGFCFEDN-NLLLVYDFLS 409
G A+KIL + V LK+ +E I+ A++ ++ L F F+DN NL +V +++
Sbjct: 66 GNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKL-EFSFKDNSNLYMVMEYMP 124
Query: 410 RGSLEENLHGNKKDGNAFGWTERYKVAVGVAEALDYLHNSCEQPVIHKDVKSSNILLSDD 469
G + +L ++ G R+ A + +YLH+ +I++D+K N+L+
Sbjct: 125 GGDMFSHL---RRIGRFSEPHARF-YAAQIVLTFEYLHSL---DLIYRDLKPENLLIDQQ 177
Query: 470 FEPQLSDFGLASWLSTSSSHLTCTDVAGTFGYLAPEYFMHGKVSEKIDVYAFGIVLLELL 529
+++DFG A + + L C GT YLAPE + ++ +D +A G+++ E+
Sbjct: 178 GYIKVADFGFAKRVKGRTWXL-C----GTPEYLAPEIILSKGYNKAVDWWALGVLIYEMA 232
Query: 530 SGKKPINSENP 540
+G P ++ P
Sbjct: 233 AGYPPFFADQP 243
>pdb|2GNF|A Chain A, Protein Kinase A Fivefold Mutant Model Of Rho-Kinase With
Y- 27632
Length = 350
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 52/191 (27%), Positives = 97/191 (50%), Gaps = 18/191 (9%)
Query: 355 GKELAVKILKPSEDV-LKEFA---SEIEIITALHHRNIISLFGFCFEDN-NLLLVYDFLS 409
G A+KIL + V LK+ +E I+ A++ ++ L F F+DN NL +V +++
Sbjct: 66 GNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKL-EFSFKDNSNLYMVMEYMP 124
Query: 410 RGSLEENLHGNKKDGNAFGWTERYKVAVGVAEALDYLHNSCEQPVIHKDVKSSNILLSDD 469
G + +L ++ G R+ A + +YLH+ +I++D+K N+L+
Sbjct: 125 GGDMFSHL---RRIGRFSEPHARF-YAAQIVLTFEYLHSL---DLIYRDLKPENLLIDQQ 177
Query: 470 FEPQLSDFGLASWLSTSSSHLTCTDVAGTFGYLAPEYFMHGKVSEKIDVYAFGIVLLELL 529
+++DFG A + + L C GT YLAPE + ++ +D +A G+++ E+
Sbjct: 178 GYIKVADFGFAKRVKGRTWXL-C----GTPEYLAPEIILSKGYNKAVDWWALGVLIYEMA 232
Query: 530 SGKKPINSENP 540
+G P ++ P
Sbjct: 233 AGYPPFFADQP 243
>pdb|2PML|X Chain X, Crystal Structure Of Pfpk7 In Complex With An Atp Analogue
pdb|2PMN|X Chain X, Crystal Structure Of Pfpk7 In Complex With An Atp-Site
Inhibitor
pdb|2PMO|X Chain X, Crystal Structure Of Pfpk7 In Complex With Hymenialdisine
Length = 348
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 59/254 (23%), Positives = 111/254 (43%), Gaps = 46/254 (18%)
Query: 322 SYQELLSATSN--FLPEYLVGKGGHSHVYRG--------------CLPDGKELAVK---- 361
S +++LS SN +L +Y+ K + + YR C D K A+K
Sbjct: 5 SMKDILSNYSNLIYLNKYVKEKDKYINDYRIIRTLNQGKFNKIILCEKDNKFYALKKYEK 64
Query: 362 -ILKPSEDVLK-------------EFASEIEIITALHHRNIISLFGFCFEDNNLLLVYDF 407
+L+ D K +F +E++IIT + + ++ G + + ++Y++
Sbjct: 65 SLLEKKRDFTKSNNDKISIKSKYDDFKNELQIITDIKNEYCLTCEGIITNYDEVYIIYEY 124
Query: 408 LSRGSL---EENLHGNKKDGNAFGWTERYKVAV-GVAEALDYLHNSCEQPVIHKDVKSSN 463
+ S+ +E K+ F + K + V + Y+HN E+ + H+DVK SN
Sbjct: 125 MENDSILKFDEYFFVLDKNYTCFIPIQVIKCIIKSVLNSFSYIHN--EKNICHRDVKPSN 182
Query: 464 ILLSDDFEPQLSDFGLASWLSTSSSHLTCTDVAGTFGYLAPEYFMH--GKVSEKIDVYAF 521
IL+ + +LSDFG + ++ GT+ ++ PE+F + K+D+++
Sbjct: 183 ILMDKNGRVKLSDFGESEYMVDKK----IKGSRGTYEFMPPEFFSNESSYNGAKVDIWSL 238
Query: 522 GIVLLELLSGKKPI 535
GI L + P
Sbjct: 239 GICLYVMFYNVVPF 252
>pdb|2J0J|A Chain A, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains
Length = 656
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 50/205 (24%), Positives = 94/205 (45%), Gaps = 15/205 (7%)
Query: 339 VGKGGHSHVYRGCL--PDGKELAVKILK----PSEDVLKEFASEIEIITALHHRNIISLF 392
+G+G V++G P+ +AV I S+ V ++F E + H +I+ L
Sbjct: 398 IGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLI 457
Query: 393 GFCFEDNNLLLVYDFLSRGSLEENLHGNKKDGNAFGWTERYKVAVGVAEALDYLHNSCEQ 452
G E N + ++ + + G L L K + A ++ AL YL + +
Sbjct: 458 GVITE-NPVWIIMELCTLGELRSFLQVRK---FSLDLASLILYAYQLSTALAYLES---K 510
Query: 453 PVIHKDVKSSNILLSDDFEPQLSDFGLASWLSTSSSHLTCTDVAGTFGYLAPEYFMHGKV 512
+H+D+ + N+L+S + +L DFGL+ ++ S++ + ++APE +
Sbjct: 511 RFVHRDIAARNVLVSSNDCVKLGDFGLSRYME-DSTYYKASKGKLPIKWMAPESINFRRF 569
Query: 513 SEKIDVYAFGIVLLE-LLSGKKPIN 536
+ DV+ FG+ + E L+ G KP
Sbjct: 570 TSASDVWMFGVCMWEILMHGVKPFQ 594
>pdb|4G3C|A Chain A, Crystal Structure Of Apo Murine Nf-kappab Inducing Kinase
(nik)
pdb|4G3C|B Chain B, Crystal Structure Of Apo Murine Nf-kappab Inducing Kinase
(nik)
pdb|4G3E|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 6-alkynylindoline (cmp1)
pdb|4G3E|B Chain B, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 6-alkynylindoline (cmp1)
Length = 352
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 62/205 (30%), Positives = 97/205 (47%), Gaps = 24/205 (11%)
Query: 339 VGKGGHSHVYRGCLPD---GKELAVKILKPSEDVLKEF-ASEIEIITALHHRNIISLFGF 394
VG+G V+R + D G + AVK ++ L+ F E+ L I+ L+G
Sbjct: 82 VGRGSFGEVHR--MKDKQTGFQCAVKKVR-----LEVFRVEELVACAGLSSPRIVPLYGA 134
Query: 395 CFEDNNLLLVYDFLSRGSLEENLHGNKKDGNAFGWTERYKVAVGVA-EALDYLHNSCEQP 453
E + + + L GSL + + K+ G +R +G A E L+YLH +
Sbjct: 135 VREGPWVNIFMELLEGGSLGQLI---KQMGCLP--EDRALYYLGQALEGLEYLHT---RR 186
Query: 454 VIHKDVKSSNILLSDDF-EPQLSDFGLASWL---STSSSHLTCTDVAGTFGYLAPEYFMH 509
++H DVK+ N+LLS D L DFG A L S LT + GT ++APE M
Sbjct: 187 ILHGDVKADNVLLSSDGSRAALCDFGHALCLQPDGLGKSLLTGDYIPGTETHMAPEVVMG 246
Query: 510 GKVSEKIDVYAFGIVLLELLSGKKP 534
K+D+++ ++L +L+G P
Sbjct: 247 KPCDAKVDIWSSCCMMLHMLNGCHP 271
>pdb|1Q24|A Chain A, Pka Double Mutant Model Of Pkb In Complex With Mgatp
pdb|1Q62|A Chain A, Pka Double Mutant Model Of Pkb
Length = 350
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 52/191 (27%), Positives = 96/191 (50%), Gaps = 18/191 (9%)
Query: 355 GKELAVKILKPSEDV-LKEFA---SEIEIITALHHRNIISLFGFCFEDN-NLLLVYDFLS 409
G A+KIL + V LK+ +E I+ A++ ++ L F F+DN NL +V ++
Sbjct: 66 GNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKL-EFSFKDNSNLYMVMEYAP 124
Query: 410 RGSLEENLHGNKKDGNAFGWTERYKVAVGVAEALDYLHNSCEQPVIHKDVKSSNILLSDD 469
G + +L ++ G R+ A + +YLH+ +I++D+K N+++
Sbjct: 125 GGEMFSHL---RRIGRFSEPHARF-YAAQIVLTFEYLHSL---DLIYRDLKPENLMIDQQ 177
Query: 470 FEPQLSDFGLASWLSTSSSHLTCTDVAGTFGYLAPEYFMHGKVSEKIDVYAFGIVLLELL 529
Q++DFG A + + L C GT YLAPE + ++ +D +A G+++ E+
Sbjct: 178 GYIQVTDFGFAKRVKGRTWXL-C----GTPEYLAPEIILSKGYNKAVDWWALGVLIYEMA 232
Query: 530 SGKKPINSENP 540
+G P ++ P
Sbjct: 233 AGYPPFFADQP 243
>pdb|2QR7|A Chain A, 2.0a X-Ray Structure Of C-Terminal Kinase Domain Of P90
Ribosomal S6 Kinase 2: Se-Met Derivative
Length = 342
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 57/204 (27%), Positives = 91/204 (44%), Gaps = 20/204 (9%)
Query: 339 VGKGGHSHVYRGCL--PDGKELAVKILKPSEDVLKEFASEIEIITAL-HHRNIISLFGFC 395
+G G +S V + C+ E AVKI+ S+ ++ EIEI+ H NII+L
Sbjct: 30 IGVGSYS-VCKRCIHKATNXEFAVKIIDKSK---RDPTEEIEILLRYGQHPNIITLKDVY 85
Query: 396 FEDNNLLLVYDFLSRGSLEENLHGNKKDGNAFGWTERYKVAVGVAEALDYLHNSCEQPVI 455
+ + +V + G L + + K F E V + + ++YLH Q V+
Sbjct: 86 DDGKYVYVVTELXKGGELLDKILRQK----FFSEREASAVLFTITKTVEYLH---AQGVV 138
Query: 456 HKDVKSSNILLSDDF-EPQ---LSDFGLASWLSTSSSHLTCTDVAGTFGYLAPEYFMHGK 511
H+D+K SNIL D+ P+ + DFG A L + L F +APE
Sbjct: 139 HRDLKPSNILYVDESGNPESIRICDFGFAKQLRAENGLLXTPCYTANF--VAPEVLERQG 196
Query: 512 VSEKIDVYAFGIVLLELLSGKKPI 535
D+++ G++L L+G P
Sbjct: 197 YDAACDIWSLGVLLYTXLTGYTPF 220
>pdb|3BHY|A Chain A, Crystal Structure Of Human Death Associated Protein Kinase
3 (Dapk3) In Complex With A Beta-Carboline Ligand
pdb|3BQR|A Chain A, Crystal Structure Of Human Death Associated Protein Kinase
3 (Dapk3) In Complex With An Imidazo-Pyridazine Ligand
Length = 283
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 55/217 (25%), Positives = 97/217 (44%), Gaps = 25/217 (11%)
Query: 343 GHSHVYRGCLPDG--KELAVKILKPSE-------DVLKEFASEIEIITALHHRNIISLFG 393
G + R C G KE A K +K +E E+ I+ + H NII+L
Sbjct: 16 GQFAIVRKCRQKGTGKEYAAKFIKKRRLSSSRRGVSREEIEREVNILREIRHPNIITLHD 75
Query: 394 FCFEDNNLLLVYDFLSRGSLEENLHGNKKDGNAFGWTERYKVAVGVAEALDYLHNSCEQP 453
+++L+ + +S G L + L + + E + + + + YLH+ +
Sbjct: 76 IFENKTDVVLILELVSGGELFDFL----AEKESLTEDEATQFLKQILDGVHYLHS---KR 128
Query: 454 VIHKDVKSSNILLSDDFEP----QLSDFGLASWLSTSSSHLTCTDVAGTFGYLAPEYFMH 509
+ H D+K NI+L D P +L DFG+A + + ++ GT ++APE +
Sbjct: 129 IAHFDLKPENIMLLDKNVPNPRIKLIDFGIAHKIEAGNE---FKNIFGTPEFVAPEIVNY 185
Query: 510 GKVSEKIDVYAFGIVLLELLSGKKPINSENPKGQESL 546
+ + D+++ G++ LLSG P E QE+L
Sbjct: 186 EPLGLEADMWSIGVITYILLSGASPFLGETK--QETL 220
>pdb|2J90|A Chain A, Crystal Structure Of Human Zip Kinase In Complex With A
Tetracyclic Pyridone Inhibitor (pyridone 6)
pdb|2J90|B Chain B, Crystal Structure Of Human Zip Kinase In Complex With A
Tetracyclic Pyridone Inhibitor (pyridone 6)
Length = 304
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 55/217 (25%), Positives = 97/217 (44%), Gaps = 25/217 (11%)
Query: 343 GHSHVYRGCLPDG--KELAVKILKPSEDV-------LKEFASEIEIITALHHRNIISLFG 393
G + R C G KE A K +K +E E+ I+ + H NII+L
Sbjct: 37 GQFAIVRKCRQKGTGKEYAAKFIKKRRLXSSRRGVSREEIEREVNILREIRHPNIITLHD 96
Query: 394 FCFEDNNLLLVYDFLSRGSLEENLHGNKKDGNAFGWTERYKVAVGVAEALDYLHNSCEQP 453
+++L+ + +S G L + L + + E + + + + YLH+ +
Sbjct: 97 IFENKTDVVLILELVSGGELFDFL----AEKESLTEDEATQFLKQILDGVHYLHS---KR 149
Query: 454 VIHKDVKSSNILLSDDFEP----QLSDFGLASWLSTSSSHLTCTDVAGTFGYLAPEYFMH 509
+ H D+K NI+L D P +L DFG+A + + ++ GT ++APE +
Sbjct: 150 IAHFDLKPENIMLLDKNVPNPRIKLIDFGIAHKIEAGNE---FKNIFGTPEFVAPEIVNY 206
Query: 510 GKVSEKIDVYAFGIVLLELLSGKKPINSENPKGQESL 546
+ + D+++ G++ LLSG P E QE+L
Sbjct: 207 EPLGLEADMWSIGVITYILLSGASPFLGETK--QETL 241
>pdb|4H1J|A Chain A, Crystal Structure Of Pyk2 With The Pyrazole 13a
pdb|4H1M|A Chain A, Crystal Structure Of Pyk2 With The Indole 10c
Length = 293
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 52/206 (25%), Positives = 96/206 (46%), Gaps = 17/206 (8%)
Query: 338 LVGKGGHSHVYRGCLPDGK----ELAVKILKP--SEDVLKEFASEIEIITALHHRNIISL 391
++G+G VY G + K +AVK K + D ++F SE I+ L H +I+ L
Sbjct: 31 ILGEGFFGEVYEGVYTNHKGEKINVAVKTCKKDCTLDNKEKFMSEAVIMKNLDHPHIVKL 90
Query: 392 FGFCFEDNNLLLVYDFLSRGSLEENLHGNKKDGNAFGWTERYKVAVGVAEALDYLHN-SC 450
G E+ ++ + G L L NK N+ ++ + +A+ YL + +C
Sbjct: 91 IGI-IEEEPTWIIMELYPYGELGHYLERNK---NSLKVLTLVLYSLQICKAMAYLESINC 146
Query: 451 EQPVIHKDVKSSNILLSDDFEPQLSDFGLASWLSTSSSHLTCTDVAGTFGYLAPEYFMHG 510
+H+D+ NIL++ +L DFGL+ ++ + + +++PE
Sbjct: 147 ----VHRDIAVRNILVASPECVKLGDFGLSRYIE-DEDYYKASVTRLPIKWMSPESINFR 201
Query: 511 KVSEKIDVYAFGIVLLELLS-GKKPI 535
+ + DV+ F + + E+LS GK+P
Sbjct: 202 RFTTASDVWMFAVCMWEILSFGKQPF 227
>pdb|3PLS|A Chain A, Ron In Complex With Ligand Amp-Pnp
Length = 298
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 53/217 (24%), Positives = 98/217 (45%), Gaps = 24/217 (11%)
Query: 338 LVGKGGHSHVYRGCLPDGKE----LAVKILKPSEDV--LKEFASEIEIITALHHRNIISL 391
++GKG VY G D + A+K L ++ ++ F E ++ L+H N+++L
Sbjct: 28 VIGKGHFGVVYHGEYIDQAQNRIQCAIKSLSRITEMQQVEAFLREGLLMRGLNHPNVLAL 87
Query: 392 FGFCFEDNNL-LLVYDFLSRGSLEENLHGNKKDGNAFGWTERYKVAVGVAEALDYLHNSC 450
G L ++ ++ G L + + +++ + + VA ++YL
Sbjct: 88 IGIMLPPEGLPHVLLPYMCHGDLLQFIRSPQRNPTV---KDLISFGLQVARGMEYL---A 141
Query: 451 EQPVIHKDVKSSNILLSDDFEPQLSDFGLA------SWLSTSSSHLTCTDVAGTFGYLAP 504
EQ +H+D+ + N +L + F +++DFGLA + S V T A
Sbjct: 142 EQKFVHRDLAARNCMLDESFTVKVADFGLARDILDREYYSVQQHRHARLPVKWT----AL 197
Query: 505 EYFMHGKVSEKIDVYAFGIVLLELLS-GKKPINSENP 540
E + + K DV++FG++L ELL+ G P +P
Sbjct: 198 ESLQTYRFTTKSDVWSFGVLLWELLTRGAPPYRHIDP 234
>pdb|2I0E|A Chain A, Structure Of Catalytic Domain Of Human Protein Kinase C
Beta Ii Complexed With A Bisindolylmaleimide Inhibitor
pdb|2I0E|B Chain B, Structure Of Catalytic Domain Of Human Protein Kinase C
Beta Ii Complexed With A Bisindolylmaleimide Inhibitor
Length = 353
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 55/216 (25%), Positives = 102/216 (47%), Gaps = 21/216 (9%)
Query: 332 NFLPEYLVGKGGHSHVYRGCLPDGKEL-AVKILKP----SEDVLKEFASEIEIITALHHR 386
NFL ++GKG V EL AVKILK +D ++ E ++
Sbjct: 23 NFL--MVLGKGSFGKVMLSERKGTDELYAVKILKKDVVIQDDDVECTMVEKRVLALPGKP 80
Query: 387 NIISLFGFCFED-NNLLLVYDFLSRGSLEENLH--GNKKDGNAFGWTERYKVAVGVAEAL 443
++ CF+ + L V ++++ G L ++ G K+ +A + A +A L
Sbjct: 81 PFLTQLHSCFQTMDRLYFVMEYVNGGDLMYHIQQVGRFKEPHAVFY------AAEIAIGL 134
Query: 444 DYLHNSCEQPVIHKDVKSSNILLSDDFEPQLSDFGLASWLSTSSSHLTCTDVAGTFGYLA 503
+L + + +I++D+K N++L + +++DFG+ +T GT Y+A
Sbjct: 135 FFLQS---KGIIYRDLKLDNVMLDSEGHIKIADFGMCK--ENIWDGVTTKXFCGTPDYIA 189
Query: 504 PEYFMHGKVSEKIDVYAFGIVLLELLSGKKPINSEN 539
PE + + +D +AFG++L E+L+G+ P E+
Sbjct: 190 PEIIAYQPYGKSVDWWAFGVLLYEMLAGQAPFEGED 225
>pdb|3FME|A Chain A, Crystal Structure Of Human Mitogen-Activated Protein
Kinase Kinase 6 (Mek6) Activated Mutant (S207d, T211d)
Length = 290
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 58/245 (23%), Positives = 113/245 (46%), Gaps = 27/245 (11%)
Query: 335 PEYLVGKGGHSHVYR-GCLPDGKELAVKILKPSEDVL--KEFASEIEI-ITALHHRNIIS 390
P +G+G + V + +P G+ +AVK ++ + + K +++I + + ++
Sbjct: 11 PIMELGRGAYGVVEKMRHVPSGQIMAVKRIRATVNSQEQKRLLMDLDISMRTVDCPFTVT 70
Query: 391 LFGFCFEDNNLLLVYDFLSRGSLEENLHGNKKDGNAFGWTERYKVAVGVAEALDYLHNSC 450
+G F + ++ + + + SL++ G K+AV + +AL++LH+
Sbjct: 71 FYGALFREGDVWICMELMDT-SLDKFYKQVIDKGQTIPEDILGKIAVSIVKALEHLHSKL 129
Query: 451 EQPVIHKDVKSSNILLSDDFEPQLSDFGLASWLSTSSSHLTCTDV-AGTFGYLAPEY--- 506
VIH+DVK SN+L++ + ++ DFG++ +L D+ AG Y+APE
Sbjct: 130 S--VIHRDVKPSNVLINALGQVKMCDFGISGYLVDD----VAKDIDAGCKPYMAPERINP 183
Query: 507 -FMHGKVSEKIDVYAFGIVLLELLSGKKPINSENPKGQESLVMWAKPILKDGKVSQLLDP 565
S K D+++ GI ++EL + P +S W P + +V + P
Sbjct: 184 ELNQKGYSVKSDIWSLGITMIELAILRFPYDS-----------WGTPFQQLKQVVEEPSP 232
Query: 566 SLDTD 570
L D
Sbjct: 233 QLPAD 237
>pdb|2GNJ|A Chain A, Pka Three Fold Mutant Model Of Rho-Kinase With Y-27632
pdb|2GNL|A Chain A, Pka Threefold Mutant Model Of Rho-Kinase With Inhibitor H-
1152p
Length = 350
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 52/191 (27%), Positives = 97/191 (50%), Gaps = 18/191 (9%)
Query: 355 GKELAVKILKPSEDV-LKEFA---SEIEIITALHHRNIISLFGFCFEDN-NLLLVYDFLS 409
G A+KIL + V LK+ +E I+ A++ ++ L F F+DN NL +V +++
Sbjct: 66 GNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKL-EFSFKDNSNLYMVMEYVP 124
Query: 410 RGSLEENLHGNKKDGNAFGWTERYKVAVGVAEALDYLHNSCEQPVIHKDVKSSNILLSDD 469
G + +L ++ G R+ A + +YLH+ +I++D+K N+L+
Sbjct: 125 GGEMFSHL---RRIGRFSEPHARF-YAAQIVLTFEYLHSL---DLIYRDLKPENLLIDQQ 177
Query: 470 FEPQLSDFGLASWLSTSSSHLTCTDVAGTFGYLAPEYFMHGKVSEKIDVYAFGIVLLELL 529
+++DFG A + + L C GT YLAPE + ++ +D +A G+++ E+
Sbjct: 178 GYIKVADFGFAKRVKGRTWXL-C----GTPEYLAPEIILSKGYNKAVDWWALGVLIYEMA 232
Query: 530 SGKKPINSENP 540
+G P ++ P
Sbjct: 233 AGYPPFFADQP 243
>pdb|3FZO|A Chain A, Crystal Structure Of Pyk2-Apo, Proline-Rich Tyrosine
Kinase
pdb|3FZP|A Chain A, Crystal Structure Of Pyk2 Complexed With Atpgs
pdb|3FZR|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-431396
pdb|3FZS|A Chain A, Crystal Structure Of Pyk2 Complexed With Birb796
pdb|3FZT|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-4618433
pdb|3H3C|A Chain A, Crystal Structure Of Pyk2 In Complex With Sulfoximine-
Substituted Trifluoromethylpyrimidine Analog
pdb|3ET7|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-2318841
Length = 277
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 52/206 (25%), Positives = 96/206 (46%), Gaps = 17/206 (8%)
Query: 338 LVGKGGHSHVYRGCLPDGK----ELAVKILKP--SEDVLKEFASEIEIITALHHRNIISL 391
++G+G VY G + K +AVK K + D ++F SE I+ L H +I+ L
Sbjct: 15 ILGEGFFGEVYEGVYTNHKGEKINVAVKTCKKDCTLDNKEKFMSEAVIMKNLDHPHIVKL 74
Query: 392 FGFCFEDNNLLLVYDFLSRGSLEENLHGNKKDGNAFGWTERYKVAVGVAEALDYLHN-SC 450
G E+ ++ + G L L NK N+ ++ + +A+ YL + +C
Sbjct: 75 IGI-IEEEPTWIIMELYPYGELGHYLERNK---NSLKVLTLVLYSLQICKAMAYLESINC 130
Query: 451 EQPVIHKDVKSSNILLSDDFEPQLSDFGLASWLSTSSSHLTCTDVAGTFGYLAPEYFMHG 510
+H+D+ NIL++ +L DFGL+ ++ + + +++PE
Sbjct: 131 ----VHRDIAVRNILVASPECVKLGDFGLSRYIE-DEDYYKASVTRLPIKWMSPESINFR 185
Query: 511 KVSEKIDVYAFGIVLLELLS-GKKPI 535
+ + DV+ F + + E+LS GK+P
Sbjct: 186 RFTTASDVWMFAVCMWEILSFGKQPF 211
>pdb|2Y4I|B Chain B, Ksr2-Mek1 Heterodimer
Length = 319
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 61/244 (25%), Positives = 103/244 (42%), Gaps = 37/244 (15%)
Query: 322 SYQELLSATSNFLPEY-----------LVGKGGHSHVYRGCLPDGKELAVKIL---KPSE 367
S+ S TS FL E+ L+GKG VY G E+A++++ + +E
Sbjct: 13 SFPRKASQTSIFLQEWDIPFEQLEIGELIGKGRFGQVYHGRWHG--EVAIRLIDIERDNE 70
Query: 368 DVLKEFASEIEIITALHHRNIISLFGFCFEDNNLLLVYDFLSRGSLEENLHGNKKDGN-A 426
D LK F E+ H N++ G C +L ++ L +G L+ +D
Sbjct: 71 DQLKAFKREVMAYRQTRHENVVLFMGACMSPPHLAIITS-LCKG---RTLYSVVRDAKIV 126
Query: 427 FGWTERYKVAVGVAEALDYLHNSCEQPVIHKDVKSSNILLSDDFEPQLSDFGLASW---L 483
+ ++A + + + YLH + ++HKD+KS N+ D+ + ++DFGL S L
Sbjct: 127 LDVNKTRQIAQEIVKGMGYLH---AKGILHKDLKSKNVFY-DNGKVVITDFGLFSISGVL 182
Query: 484 STSSSHLTCTDVAGTFGYLAPEYFMHGK---------VSEKIDVYAFGIVLLELLSGKKP 534
G +LAPE S+ DV+A G + EL + + P
Sbjct: 183 QAGRREDKLRIQNGWLCHLAPEIIRQLSPDTEEDKLPFSKHSDVFALGTIWYELHAREWP 242
Query: 535 INSE 538
++
Sbjct: 243 FKTQ 246
>pdb|1RDQ|E Chain E, Hydrolysis Of Atp In The Crystal Of Y204a Mutant Of
Camp-Dependent Protein Kinase
Length = 350
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 51/191 (26%), Positives = 96/191 (50%), Gaps = 18/191 (9%)
Query: 355 GKELAVKILKPSEDV-LKEFA---SEIEIITALHHRNIISLFGFCFEDN-NLLLVYDFLS 409
G A+KIL + V LK+ +E I+ A++ ++ L F F+DN NL +V ++++
Sbjct: 66 GNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKL-EFSFKDNSNLYMVMEYVA 124
Query: 410 RGSLEENLHGNKKDGNAFGWTERYKVAVGVAEALDYLHNSCEQPVIHKDVKSSNILLSDD 469
G + +L ++ G R+ A + +YLH+ +I++D+K N+L+
Sbjct: 125 GGEMFSHL---RRIGRFSEPHARF-YAAQIVLTFEYLHSL---DLIYRDLKPENLLIDQQ 177
Query: 470 FEPQLSDFGLASWLSTSSSHLTCTDVAGTFGYLAPEYFMHGKVSEKIDVYAFGIVLLELL 529
Q++DFG A + + L T A LAPE + ++ +D +A G+++ E+
Sbjct: 178 GYIQVTDFGFAKRVKGRTWXLCGTPEA-----LAPEIILSKGYNKAVDWWALGVLIYEMA 232
Query: 530 SGKKPINSENP 540
+G P ++ P
Sbjct: 233 AGYPPFFADQP 243
>pdb|1ZRZ|A Chain A, Crystal Structure Of The Catalytic Domain Of Atypical
Protein Kinase C-Iota
Length = 364
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 40/151 (26%), Positives = 78/151 (51%), Gaps = 14/151 (9%)
Query: 395 CFE-DNNLLLVYDFLSRGSLEENLHGNKKDGNAFGWTERYKVAVGVAEALDYLHNSCEQP 453
CF+ ++ L V ++++ G L ++ +K R+ A ++ AL+YLH E+
Sbjct: 89 CFQTESRLFFVIEYVNGGDLMFHMQRQRKLPEEHA---RFYSA-EISLALNYLH---ERG 141
Query: 454 VIHKDVKSSNILLSDDFEPQLSDFGLASWLSTSSSHLTCTDVAGTFGYLAPEYFMHGKVS 513
+I++D+K N+LL + +L+D+G+ T + GT Y+APE
Sbjct: 142 IIYRDLKLDNVLLDSEGHIKLTDYGMCK--EGLRPGDTTSXFCGTPNYIAPEILRGEDYG 199
Query: 514 EKIDVYAFGIVLLELLSGKKPIN----SENP 540
+D +A G+++ E+++G+ P + S+NP
Sbjct: 200 FSVDWWALGVLMFEMMAGRSPFDIVGSSDNP 230
>pdb|2WTK|C Chain C, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha
Complex
pdb|2WTK|F Chain F, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha
Complex
Length = 305
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 41/168 (24%), Positives = 81/168 (48%), Gaps = 10/168 (5%)
Query: 376 EIEIITALHHRNIISLFGFCF--EDNNLLLVYDFLSRGSLEENLHGNKKDGNAFGWTERY 433
EI+++ L H+N+I L + E + +V ++ G ++E L + F + +
Sbjct: 56 EIQLLRRLRHKNVIQLVDVLYNEEKQKMYMVMEYCVCG-MQEMLDSVPE--KRFPVCQAH 112
Query: 434 KVAVGVAEALDYLHNSCEQPVIHKDVKSSNILLSDDFEPQLSDFGLASWLSTSSSHLTCT 493
+ + L+YLH+ Q ++HKD+K N+LL+ ++S G+A L ++ TC
Sbjct: 113 GYFCQLIDGLEYLHS---QGIVHKDIKPGNLLLTTGGTLKISALGVAEALHPFAADDTCR 169
Query: 494 DVAGTFGYLAPEYF--MHGKVSEKIDVYAFGIVLLELLSGKKPINSEN 539
G+ + PE + K+D+++ G+ L + +G P +N
Sbjct: 170 TSQGSPAFQPPEIANGLDTFSGFKVDIWSAGVTLYNITTGLYPFEGDN 217
>pdb|1YRP|A Chain A, Catalytic Domain Of Human Zip Kinase Phosphorylated At
Thr265
pdb|1YRP|B Chain B, Catalytic Domain Of Human Zip Kinase Phosphorylated At
Thr265
Length = 278
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 55/217 (25%), Positives = 97/217 (44%), Gaps = 25/217 (11%)
Query: 343 GHSHVYRGCLPDG--KELAVKILKPSE-------DVLKEFASEIEIITALHHRNIISLFG 393
G + R C G KE A K +K +E E+ I+ + H NII+L
Sbjct: 23 GQFAIVRKCRQKGTGKEYAAKFIKKRRLSSSRRGVSREEIEREVNILREIRHPNIITLHD 82
Query: 394 FCFEDNNLLLVYDFLSRGSLEENLHGNKKDGNAFGWTERYKVAVGVAEALDYLHNSCEQP 453
+++L+ + +S G L + L + + E + + + + YLH+ +
Sbjct: 83 IFENKTDVVLILELVSGGELFDFL----AEKESLTEDEATQFLKQILDGVHYLHS---KR 135
Query: 454 VIHKDVKSSNILLSDDFEP----QLSDFGLASWLSTSSSHLTCTDVAGTFGYLAPEYFMH 509
+ H D+K NI+L D P +L DFG+A + + ++ GT ++APE +
Sbjct: 136 IAHFDLKPENIMLLDKNVPNPRIKLIDFGIAHKIEAGNE---FKNIFGTPEFVAPEIVNY 192
Query: 510 GKVSEKIDVYAFGIVLLELLSGKKPINSENPKGQESL 546
+ + D+++ G++ LLSG P E QE+L
Sbjct: 193 EPLGLEADMWSIGVITYILLSGASPFLGETK--QETL 227
>pdb|3CC6|A Chain A, Crystal Structure Of Kinase Domain Of Protein Tyrosine
Kinase 2 Beta (ptk2b)
Length = 281
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 52/206 (25%), Positives = 96/206 (46%), Gaps = 17/206 (8%)
Query: 338 LVGKGGHSHVYRGCLPDGK----ELAVKILKP--SEDVLKEFASEIEIITALHHRNIISL 391
++G+G VY G + K +AVK K + D ++F SE I+ L H +I+ L
Sbjct: 19 ILGEGFFGEVYEGVYTNHKGEKINVAVKTCKKDCTLDNKEKFMSEAVIMKNLDHPHIVKL 78
Query: 392 FGFCFEDNNLLLVYDFLSRGSLEENLHGNKKDGNAFGWTERYKVAVGVAEALDYLHN-SC 450
G E+ ++ + G L L NK N+ ++ + +A+ YL + +C
Sbjct: 79 IGI-IEEEPTWIIMELYPYGELGHYLERNK---NSLKVLTLVLYSLQICKAMAYLESINC 134
Query: 451 EQPVIHKDVKSSNILLSDDFEPQLSDFGLASWLSTSSSHLTCTDVAGTFGYLAPEYFMHG 510
+H+D+ NIL++ +L DFGL+ ++ + + +++PE
Sbjct: 135 ----VHRDIAVRNILVASPECVKLGDFGLSRYIE-DEDYYKASVTRLPIKWMSPESINFR 189
Query: 511 KVSEKIDVYAFGIVLLELLS-GKKPI 535
+ + DV+ F + + E+LS GK+P
Sbjct: 190 RFTTASDVWMFAVCMWEILSFGKQPF 215
>pdb|4DC2|A Chain A, Structure Of Pkc In Complex With A Substrate Peptide From
Par-3
Length = 396
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 40/151 (26%), Positives = 78/151 (51%), Gaps = 14/151 (9%)
Query: 395 CFE-DNNLLLVYDFLSRGSLEENLHGNKKDGNAFGWTERYKVAVGVAEALDYLHNSCEQP 453
CF+ ++ L V ++++ G L ++ +K R+ A ++ AL+YLH E+
Sbjct: 121 CFQTESRLFFVIEYVNGGDLMFHMQRQRKLPEEHA---RFYSA-EISLALNYLH---ERG 173
Query: 454 VIHKDVKSSNILLSDDFEPQLSDFGLASWLSTSSSHLTCTDVAGTFGYLAPEYFMHGKVS 513
+I++D+K N+LL + +L+D+G+ T + GT Y+APE
Sbjct: 174 IIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRPGD--TTSTFCGTPNYIAPEILRGEDYG 231
Query: 514 EKIDVYAFGIVLLELLSGKKPIN----SENP 540
+D +A G+++ E+++G+ P + S+NP
Sbjct: 232 FSVDWWALGVLMFEMMAGRSPFDIVGSSDNP 262
>pdb|3QD2|B Chain B, Crsytal Structure Of Mouse Perk Kinase Domain
Length = 332
Score = 57.4 bits (137), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 31/105 (29%), Positives = 57/105 (54%), Gaps = 13/105 (12%)
Query: 435 VAVGVAEALDYLHNSCEQPVIHKDVKSSNILLSDDFEPQLSDFGLASW----------LS 484
+ + +AEA+++LH+ ++H+D+K SNI + D ++ DFGL + L+
Sbjct: 169 IFIQIAEAVEFLHSKG---LMHRDLKPSNIFFTMDDVVKVGDFGLVTAMDQDEEEQTVLT 225
Query: 485 TSSSHLTCTDVAGTFGYLAPEYFMHGKVSEKIDVYAFGIVLLELL 529
++ T GT Y++PE S K+D+++ G++L ELL
Sbjct: 226 PMPAYATHXGQVGTKLYMSPEQIHGNNYSHKVDIFSLGLILFELL 270
>pdb|3ZH8|A Chain A, A Novel Small Molecule Apkc Inhibitor
pdb|3ZH8|B Chain B, A Novel Small Molecule Apkc Inhibitor
pdb|3ZH8|C Chain C, A Novel Small Molecule Apkc Inhibitor
Length = 349
Score = 57.4 bits (137), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 40/151 (26%), Positives = 78/151 (51%), Gaps = 14/151 (9%)
Query: 395 CFE-DNNLLLVYDFLSRGSLEENLHGNKKDGNAFGWTERYKVAVGVAEALDYLHNSCEQP 453
CF+ ++ L V ++++ G L ++ +K R+ A ++ AL+YLH E+
Sbjct: 74 CFQTESRLFFVIEYVNGGDLMFHMQRQRKLPEEHA---RFYSA-EISLALNYLH---ERG 126
Query: 454 VIHKDVKSSNILLSDDFEPQLSDFGLASWLSTSSSHLTCTDVAGTFGYLAPEYFMHGKVS 513
+I++D+K N+LL + +L+D+G+ T + GT Y+APE
Sbjct: 127 IIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRPGD--TTSXFCGTPNYIAPEILRGEDYG 184
Query: 514 EKIDVYAFGIVLLELLSGKKPIN----SENP 540
+D +A G+++ E+++G+ P + S+NP
Sbjct: 185 FSVDWWALGVLMFEMMAGRSPFDIVGSSDNP 215
>pdb|3KA0|A Chain A, Mk2 Complex With Inhibitor
6-(5-(2-Aminopyrimidin-4-Ylamino)-2-
Hydroxyphenyl)-N-Methylbenzo[b]thiophene-2-Carboxamide
Length = 320
Score = 57.4 bits (137), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 42/143 (29%), Positives = 70/143 (48%), Gaps = 13/143 (9%)
Query: 401 LLLVYDFLSRGSLEENLHGNKKDGNAFGWTERYKVAVGVAEALDYLHNSCEQPVIHKDVK 460
LL+V + L G L + + AF E ++ + EA+ YLH+ + H+DVK
Sbjct: 88 LLIVMECLDGGELFSRIQD--RGDQAFTEREASEIMKSIGEAIQYLHSI---NIAHRDVK 142
Query: 461 SSNILLSDDFEP----QLSDFGLASWLSTSSSHLTCTDVAGTFGYLAPEYFMHGKVSEKI 516
N+L + P +L+DFG A ++SH + T+ T Y+APE K +
Sbjct: 143 PENLLYTSK-RPNAILKLTDFGFAK---ETTSHNSLTEPCYTPYYVAPEVLGPEKYDKSC 198
Query: 517 DVYAFGIVLLELLSGKKPINSEN 539
D+++ G+++ LL G P S +
Sbjct: 199 DMWSLGVIMYILLCGYPPFYSNH 221
>pdb|2R5T|A Chain A, Crystal Structure Of Inactive Serum And Glucocorticoid-
Regulated Kinase 1 In Complex With Amp-Pnp
pdb|3HDM|A Chain A, Crystal Structure Of Serum And Glucocorticoid-Regulated
Kinase 1 In Complex With Compound 1
pdb|3HDN|A Chain A, Crystal Structure Of Serum And Glucocorticoid-Regulated
Kinase 1 In Complex With Compound 2
Length = 373
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 55/180 (30%), Positives = 81/180 (45%), Gaps = 14/180 (7%)
Query: 362 ILKPSEDVLKEFASEIEIITA-LHHRNIISLFGFCFED-NNLLLVYDFLSRGSLEENLHG 419
ILK E+ K SE ++ + H ++ L F F+ + L V D+++ G L +L
Sbjct: 76 ILKKKEE--KHIMSERNVLLKNVKHPFLVGL-HFSFQTADKLYFVLDYINGGELFYHLQR 132
Query: 420 NKKDGNAFGWTERYKVAVGVAEALDYLHNSCEQPVIHKDVKSSNILLSDDFEPQLSDFGL 479
+ F A +A AL YLH+ ++++D+K NILL L+DFGL
Sbjct: 133 ER----CFLEPRARFYAAEIASALGYLHSLN---IVYRDLKPENILLDSQGHIVLTDFGL 185
Query: 480 ASWLSTSSSHLTCTDVAGTFGYLAPEYFMHGKVSEKIDVYAFGIVLLELLSGKKPINSEN 539
+S T + GT YLAPE +D + G VL E+L G P S N
Sbjct: 186 CKENIEHNS--TTSTFCGTPEYLAPEVLHKQPYDRTVDWWCLGAVLYEMLYGLPPFYSRN 243
>pdb|3A8W|A Chain A, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8W|B Chain B, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8X|A Chain A, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8X|B Chain B, Crystal Structure Of Pkciota Kinase Domain
Length = 345
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 40/151 (26%), Positives = 78/151 (51%), Gaps = 14/151 (9%)
Query: 395 CFE-DNNLLLVYDFLSRGSLEENLHGNKKDGNAFGWTERYKVAVGVAEALDYLHNSCEQP 453
CF+ ++ L V ++++ G L ++ +K R+ A ++ AL+YLH E+
Sbjct: 78 CFQTESRLFFVIEYVNGGDLMFHMQRQRKLPEEHA---RFYSA-EISLALNYLH---ERG 130
Query: 454 VIHKDVKSSNILLSDDFEPQLSDFGLASWLSTSSSHLTCTDVAGTFGYLAPEYFMHGKVS 513
+I++D+K N+LL + +L+D+G+ T + GT Y+APE
Sbjct: 131 IIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRPGD--TTSXFCGTPNYIAPEILRGEDYG 188
Query: 514 EKIDVYAFGIVLLELLSGKKPIN----SENP 540
+D +A G+++ E+++G+ P + S+NP
Sbjct: 189 FSVDWWALGVLMFEMMAGRSPFDIVGSSDNP 219
>pdb|1P4O|A Chain A, Structure Of Apo Unactivated Igf-1r Kinase Domain At 1.5a
Resolution.
pdb|1P4O|B Chain B, Structure Of Apo Unactivated Igf-1r Kinase Domain At 1.5a
Resolution
Length = 322
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 42/204 (20%), Positives = 97/204 (47%), Gaps = 17/204 (8%)
Query: 339 VGKGGHSHVY----RGCLPDGKE--LAVKILKPSEDVLK--EFASEIEIITALHHRNIIS 390
+G+G VY +G + D E +A+K + + + + EF +E ++ + +++
Sbjct: 33 LGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVR 92
Query: 391 LFGFCFEDNNLLLVYDFLSRGSLEENLH------GNKKDGNAFGWTERYKVAVGVAEALD 444
L G + L++ + ++RG L+ L N ++ ++A +A+ +
Sbjct: 93 LLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPAMANNPVLAPPSLSKMIQMAGEIADGMA 152
Query: 445 YLHNSCEQPVIHKDVKSSNILLSDDFEPQLSDFGLASWLSTSSSHLTCTDVAGTFGYLAP 504
YL+ + +H+D+ + N ++++DF ++ DFG+ + + + +++P
Sbjct: 153 YLNAN---KFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMSP 209
Query: 505 EYFMHGKVSEKIDVYAFGIVLLEL 528
E G + DV++FG+VL E+
Sbjct: 210 ESLKDGVFTTYSDVWSFGVVLWEI 233
>pdb|2J0L|A Chain A, Crystal Structure Of A The Active Conformation Of The
Kinase Domain Of Focal Adhesion Kinase With A
Phosphorylated Activation Loop
Length = 276
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 50/205 (24%), Positives = 93/205 (45%), Gaps = 15/205 (7%)
Query: 339 VGKGGHSHVYRGCL--PDGKELAVKILK----PSEDVLKEFASEIEIITALHHRNIISLF 392
+G+G V++G P+ +AV I S+ V ++F E + H +I+ L
Sbjct: 18 IGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLI 77
Query: 393 GFCFEDNNLLLVYDFLSRGSLEENLHGNKKDGNAFGWTERYKVAVGVAEALDYLHNSCEQ 452
G E N + ++ + + G L L K + A ++ AL YL + +
Sbjct: 78 GVITE-NPVWIIMELCTLGELRSFLQVRK---FSLDLASLILYAYQLSTALAYLES---K 130
Query: 453 PVIHKDVKSSNILLSDDFEPQLSDFGLASWLSTSSSHLTCTDVAGTFGYLAPEYFMHGKV 512
+H+D+ + N+L+S + +L DFGL+ ++ S+ + ++APE +
Sbjct: 131 RFVHRDIAARNVLVSSNDCVKLGDFGLSRYME-DSTXXKASKGKLPIKWMAPESINFRRF 189
Query: 513 SEKIDVYAFGIVLLE-LLSGKKPIN 536
+ DV+ FG+ + E L+ G KP
Sbjct: 190 TSASDVWMFGVCMWEILMHGVKPFQ 214
>pdb|3V8S|A Chain A, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|B Chain B, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|C Chain C, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|D Chain D, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3TV7|A Chain A, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|B Chain B, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|C Chain C, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|D Chain D, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TWJ|A Chain A, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|B Chain B, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|C Chain C, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|D Chain D, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
Length = 410
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 54/201 (26%), Positives = 89/201 (44%), Gaps = 17/201 (8%)
Query: 356 KELAVKILKPSEDVLKE----FASEIEIITALHHRNIISLFGFCFEDNNLLLVYDFLSRG 411
K A+K+L E + + F E +I+ + ++ LF +D L +V +++ G
Sbjct: 95 KVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANSPWVVQLFYAFQDDRYLYMVMEYMPGG 154
Query: 412 SLEENLHGNKKDGNAFGWTERYKVAVGVAEALDYLHNSCEQPVIHKDVKSSNILLSDDFE 471
L NL N W Y V +A LD +H+ IH+DVK N+LL
Sbjct: 155 DLV-NLMSNYDVPEK--WARFYTAEVVLA--LDAIHS---MGFIHRDVKPDNMLLDKSGH 206
Query: 472 PQLSDFGLASWLSTSSSHLTCTDVAGTFGYLAPEYFM----HGKVSEKIDVYAFGIVLLE 527
+L+DFG ++ + C GT Y++PE G + D ++ G+ L E
Sbjct: 207 LKLADFGTCMKMN-KEGMVRCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYE 265
Query: 528 LLSGKKPINSENPKGQESLVM 548
+L G P +++ G S +M
Sbjct: 266 MLVGDTPFYADSLVGTYSKIM 286
>pdb|1K3A|A Chain A, Structure Of The Insulin-Like Growth Factor 1 Receptor
Kinase
Length = 299
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 42/204 (20%), Positives = 98/204 (48%), Gaps = 17/204 (8%)
Query: 339 VGKGGHSHVY----RGCLPDGKE--LAVKILKPSEDVLK--EFASEIEIITALHHRNIIS 390
+G+G VY +G + D E +A+K + + + + EF +E ++ + +++
Sbjct: 18 LGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVR 77
Query: 391 LFGFCFEDNNLLLVYDFLSRGSLEENLHGNKKD--GNAF----GWTERYKVAVGVAEALD 444
L G + L++ + ++RG L+ L + + N ++ ++A +A+ +
Sbjct: 78 LLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIADGMA 137
Query: 445 YLHNSCEQPVIHKDVKSSNILLSDDFEPQLSDFGLASWLSTSSSHLTCTDVAGTFGYLAP 504
YL+ + +H+D+ + N ++++DF ++ DFG+ + + +++P
Sbjct: 138 YLNAN---KFVHRDLAARNCMVAEDFTVKIGDFGMTRDIXETDXXRKGGKGLLPVRWMSP 194
Query: 505 EYFMHGKVSEKIDVYAFGIVLLEL 528
E G + DV++FG+VL E+
Sbjct: 195 ESLKDGVFTTYSDVWSFGVVLWEI 218
>pdb|2V55|A Chain A, Mechanism Of Multi-site Phosphorylation From A Rock-i:rhoe
Complex Structure
pdb|2V55|C Chain C, Mechanism Of Multi-site Phosphorylation From A Rock-i:rhoe
Complex Structure
Length = 406
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 54/201 (26%), Positives = 89/201 (44%), Gaps = 17/201 (8%)
Query: 356 KELAVKILKPSEDVLKE----FASEIEIITALHHRNIISLFGFCFEDNNLLLVYDFLSRG 411
K A+K+L E + + F E +I+ + ++ LF +D L +V +++ G
Sbjct: 100 KVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANSPWVVQLFYAFQDDRYLYMVMEYMPGG 159
Query: 412 SLEENLHGNKKDGNAFGWTERYKVAVGVAEALDYLHNSCEQPVIHKDVKSSNILLSDDFE 471
L NL N W Y V +A LD +H+ IH+DVK N+LL
Sbjct: 160 DLV-NLMSNYDVPEK--WARFYTAEVVLA--LDAIHS---MGFIHRDVKPDNMLLDKSGH 211
Query: 472 PQLSDFGLASWLSTSSSHLTCTDVAGTFGYLAPEYFM----HGKVSEKIDVYAFGIVLLE 527
+L+DFG ++ + C GT Y++PE G + D ++ G+ L E
Sbjct: 212 LKLADFGTCMKMN-KEGMVRCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYE 270
Query: 528 LLSGKKPINSENPKGQESLVM 548
+L G P +++ G S +M
Sbjct: 271 MLVGDTPFYADSLVGTYSKIM 291
>pdb|2JKK|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
pdb|2JKO|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 50/205 (24%), Positives = 93/205 (45%), Gaps = 15/205 (7%)
Query: 339 VGKGGHSHVYRGCL--PDGKELAVKILK----PSEDVLKEFASEIEIITALHHRNIISLF 392
+G+G V++G P+ +AV I S+ V ++F E + H +I+ L
Sbjct: 18 IGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLI 77
Query: 393 GFCFEDNNLLLVYDFLSRGSLEENLHGNKKDGNAFGWTERYKVAVGVAEALDYLHNSCEQ 452
G E N + ++ + + G L L K + A ++ AL YL + +
Sbjct: 78 GVITE-NPVWIIMELCTLGELRSFLQVRK---FSLDLASLILYAYQLSTALAYLES---K 130
Query: 453 PVIHKDVKSSNILLSDDFEPQLSDFGLASWLSTSSSHLTCTDVAGTFGYLAPEYFMHGKV 512
+H+D+ + N+L+S +L DFGL+ ++ S++ + ++APE +
Sbjct: 131 RFVHRDIAARNVLVSATDCVKLGDFGLSRYME-DSTYYKASKGKLPIKWMAPESINFRRF 189
Query: 513 SEKIDVYAFGIVLLE-LLSGKKPIN 536
+ DV+ FG+ + E L+ G KP
Sbjct: 190 TSASDVWMFGVCMWEILMHGVKPFQ 214
>pdb|1P14|A Chain A, Crystal Structure Of A Catalytic-Loop Mutant Of The
Insulin Receptor Tyrosine Kinase
Length = 306
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 45/206 (21%), Positives = 94/206 (45%), Gaps = 17/206 (8%)
Query: 339 VGKGGHSHVYRGCLPD------GKELAVKILKPSEDVLK--EFASEIEIITALHHRNIIS 390
+G+G VY G D +AVK + S + + EF +E ++ +++
Sbjct: 25 LGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVVR 84
Query: 391 LFGFCFEDNNLLLVYDFLSRGSLEENLHGNKKDG-NAFG-----WTERYKVAVGVAEALD 444
L G + L+V + ++ G L+ L + + N G E ++A +A+ +
Sbjct: 85 LLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGMA 144
Query: 445 YLHNSCEQPVIHKDVKSSNILLSDDFEPQLSDFGLASWLSTSSSHLTCTDVAGTFGYLAP 504
YL+ + +H+++ + N +++ DF ++ DFG+ + + + ++AP
Sbjct: 145 YLN---AKKFVHRNLAARNCMVAHDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMAP 201
Query: 505 EYFMHGKVSEKIDVYAFGIVLLELLS 530
E G + D+++FG+VL E+ S
Sbjct: 202 ESLKDGVFTTSSDMWSFGVVLWEITS 227
>pdb|3QQU|A Chain A, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|B Chain B, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|C Chain C, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|D Chain D, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
Length = 301
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 42/204 (20%), Positives = 99/204 (48%), Gaps = 17/204 (8%)
Query: 339 VGKGGHSHVY----RGCLPDGKE--LAVKILKPSEDVLK--EFASEIEIITALHHRNIIS 390
+G+G VY +G + D E +A+K + + + + EF +E ++ + +++
Sbjct: 20 LGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVR 79
Query: 391 LFGFCFEDNNLLLVYDFLSRGSLEENLHGNKKD--GNAF----GWTERYKVAVGVAEALD 444
L G + L++ + ++RG L+ L + + N ++ ++A +A+ +
Sbjct: 80 LLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIADGMA 139
Query: 445 YLHNSCEQPVIHKDVKSSNILLSDDFEPQLSDFGLASWLSTSSSHLTCTDVAGTFGYLAP 504
YL+ + +H+D+ + N ++++DF ++ DFG+ + + + +++P
Sbjct: 140 YLNAN---KFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMSP 196
Query: 505 EYFMHGKVSEKIDVYAFGIVLLEL 528
E G + DV++FG+VL E+
Sbjct: 197 ESLKDGVFTTYSDVWSFGVVLWEI 220
>pdb|3LW0|A Chain A, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|B Chain B, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|C Chain C, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|D Chain D, Igf-1rk In Complex With Ligand Msc1609119a-1
Length = 304
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 42/204 (20%), Positives = 97/204 (47%), Gaps = 17/204 (8%)
Query: 339 VGKGGHSHVY----RGCLPDGKE--LAVKILKPSEDVLK--EFASEIEIITALHHRNIIS 390
+G+G VY +G + D E +A+K + + + + EF +E ++ + +++
Sbjct: 23 LGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVR 82
Query: 391 LFGFCFEDNNLLLVYDFLSRGSLEENLH------GNKKDGNAFGWTERYKVAVGVAEALD 444
L G + L++ + ++RG L+ L N ++ ++A +A+ +
Sbjct: 83 LLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPAMANNPVLAPPSLSKMIQMAGEIADGMA 142
Query: 445 YLHNSCEQPVIHKDVKSSNILLSDDFEPQLSDFGLASWLSTSSSHLTCTDVAGTFGYLAP 504
YL+ + +H+D+ + N ++++DF ++ DFG+ + + + +++P
Sbjct: 143 YLNAN---KFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMSP 199
Query: 505 EYFMHGKVSEKIDVYAFGIVLLEL 528
E G + DV++FG+VL E+
Sbjct: 200 ESLKDGVFTTYSDVWSFGVVLWEI 223
>pdb|2OJ9|A Chain A, Structure Of Igf-1r Kinase Domain Complexed With A
Benzimidazole Inhibitor
pdb|3NW5|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (11b)
pdb|3NW6|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (11a)
pdb|3NW7|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (34)
Length = 307
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 42/204 (20%), Positives = 99/204 (48%), Gaps = 17/204 (8%)
Query: 339 VGKGGHSHVY----RGCLPDGKE--LAVKILKPSEDVLK--EFASEIEIITALHHRNIIS 390
+G+G VY +G + D E +A+K + + + + EF +E ++ + +++
Sbjct: 26 LGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVR 85
Query: 391 LFGFCFEDNNLLLVYDFLSRGSLEENLHGNKKD--GNAF----GWTERYKVAVGVAEALD 444
L G + L++ + ++RG L+ L + + N ++ ++A +A+ +
Sbjct: 86 LLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIADGMA 145
Query: 445 YLHNSCEQPVIHKDVKSSNILLSDDFEPQLSDFGLASWLSTSSSHLTCTDVAGTFGYLAP 504
YL+ + +H+D+ + N ++++DF ++ DFG+ + + + +++P
Sbjct: 146 YLNAN---KFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMSP 202
Query: 505 EYFMHGKVSEKIDVYAFGIVLLEL 528
E G + DV++FG+VL E+
Sbjct: 203 ESLKDGVFTTYSDVWSFGVVLWEI 226
>pdb|3I81|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With Bms-754807
[1-(4-((5-Cyclopropyl-
1h-Pyrazol-3-Yl)amino)pyrrolo[2,1-F][1,2,
4]triazin-2-Yl)-N-
(6-Fluoro-3-Pyridinyl)-2-Methyl-L-Prolinamide]
Length = 315
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 42/204 (20%), Positives = 99/204 (48%), Gaps = 17/204 (8%)
Query: 339 VGKGGHSHVY----RGCLPDGKE--LAVKILKPSEDVLK--EFASEIEIITALHHRNIIS 390
+G+G VY +G + D E +A+K + + + + EF +E ++ + +++
Sbjct: 26 LGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVR 85
Query: 391 LFGFCFEDNNLLLVYDFLSRGSLEENLHGNKKD--GNAF----GWTERYKVAVGVAEALD 444
L G + L++ + ++RG L+ L + + N ++ ++A +A+ +
Sbjct: 86 LLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIADGMA 145
Query: 445 YLHNSCEQPVIHKDVKSSNILLSDDFEPQLSDFGLASWLSTSSSHLTCTDVAGTFGYLAP 504
YL+ + +H+D+ + N ++++DF ++ DFG+ + + + +++P
Sbjct: 146 YLNAN---KFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMSP 202
Query: 505 EYFMHGKVSEKIDVYAFGIVLLEL 528
E G + DV++FG+VL E+
Sbjct: 203 ESLKDGVFTTYSDVWSFGVVLWEI 226
>pdb|3O23|A Chain A, Human Unphosphorylated Igf1-R Kinase Domain In Complex
With An Hydantoin Inhibitor
Length = 305
Score = 57.0 bits (136), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 42/204 (20%), Positives = 99/204 (48%), Gaps = 17/204 (8%)
Query: 339 VGKGGHSHVY----RGCLPDGKE--LAVKILKPSEDVLK--EFASEIEIITALHHRNIIS 390
+G+G VY +G + D E +A+K + + + + EF +E ++ + +++
Sbjct: 24 LGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVR 83
Query: 391 LFGFCFEDNNLLLVYDFLSRGSLEENLHGNKKD--GNAF----GWTERYKVAVGVAEALD 444
L G + L++ + ++RG L+ L + + N ++ ++A +A+ +
Sbjct: 84 LLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIADGMA 143
Query: 445 YLHNSCEQPVIHKDVKSSNILLSDDFEPQLSDFGLASWLSTSSSHLTCTDVAGTFGYLAP 504
YL+ + +H+D+ + N ++++DF ++ DFG+ + + + +++P
Sbjct: 144 YLNAN---KFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMSP 200
Query: 505 EYFMHGKVSEKIDVYAFGIVLLEL 528
E G + DV++FG+VL E+
Sbjct: 201 ESLKDGVFTTYSDVWSFGVVLWEI 224
>pdb|1M7N|A Chain A, Crystal Structure Of Unactivated Apo Insulin-Like Growth
Factor-1 Receptor Kinase Domain
pdb|1M7N|B Chain B, Crystal Structure Of Unactivated Apo Insulin-Like Growth
Factor-1 Receptor Kinase Domain
Length = 322
Score = 57.0 bits (136), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 42/204 (20%), Positives = 99/204 (48%), Gaps = 17/204 (8%)
Query: 339 VGKGGHSHVY----RGCLPDGKE--LAVKILKPSEDVLK--EFASEIEIITALHHRNIIS 390
+G+G VY +G + D E +A+K + + + + EF +E ++ + +++
Sbjct: 33 LGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVR 92
Query: 391 LFGFCFEDNNLLLVYDFLSRGSLEENLHGNKKD--GNAF----GWTERYKVAVGVAEALD 444
L G + L++ + ++RG L+ L + + N ++ ++A +A+ +
Sbjct: 93 LLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIADGMA 152
Query: 445 YLHNSCEQPVIHKDVKSSNILLSDDFEPQLSDFGLASWLSTSSSHLTCTDVAGTFGYLAP 504
YL+ + +H+D+ + N ++++DF ++ DFG+ + + + +++P
Sbjct: 153 YLNAN---KFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMSP 209
Query: 505 EYFMHGKVSEKIDVYAFGIVLLEL 528
E G + DV++FG+VL E+
Sbjct: 210 ESLKDGVFTTYSDVWSFGVVLWEI 233
>pdb|1SZM|A Chain A, Dual Binding Mode Of Bisindolylmaleimide 2 To Protein
Kinase A (Pka)
pdb|1SZM|B Chain B, Dual Binding Mode Of Bisindolylmaleimide 2 To Protein
Kinase A (Pka)
Length = 350
Score = 57.0 bits (136), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 51/191 (26%), Positives = 96/191 (50%), Gaps = 18/191 (9%)
Query: 355 GKELAVKILKPSEDV-LKEFA---SEIEIITALHHRNIISLFGFCFEDN-NLLLVYDFLS 409
G A+KIL + V LK+ +E I+ A++ ++ L F F+DN NL +V ++
Sbjct: 66 GNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKL-EFSFKDNSNLYMVMEYAP 124
Query: 410 RGSLEENLHGNKKDGNAFGWTERYKVAVGVAEALDYLHNSCEQPVIHKDVKSSNILLSDD 469
G + +L ++ G R+ A + +YLH+ +I++D+K N+++
Sbjct: 125 GGEMFSHL---RRIGRFXEPHARF-YAAQIVLTFEYLHSL---DLIYRDLKPENLMIDQQ 177
Query: 470 FEPQLSDFGLASWLSTSSSHLTCTDVAGTFGYLAPEYFMHGKVSEKIDVYAFGIVLLELL 529
+++DFG A + + L C GT YLAPE + ++ +D +A G+++ E+
Sbjct: 178 GYIKVTDFGFAKRVKGRTWXL-C----GTPEYLAPEIILSKGYNKAVDWWALGVLIYEMA 232
Query: 530 SGKKPINSENP 540
+G P ++ P
Sbjct: 233 AGYPPFFADQP 243
>pdb|3EKK|A Chain A, Insulin Receptor Kinase Complexed With An Inhibitor
pdb|3EKN|A Chain A, Insulin Receptor Kinase Complexed With An Inhibitor
Length = 307
Score = 57.0 bits (136), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 45/206 (21%), Positives = 94/206 (45%), Gaps = 17/206 (8%)
Query: 339 VGKGGHSHVYRGCLPD------GKELAVKILKPSEDVLK--EFASEIEIITALHHRNIIS 390
+G+G VY G D +AVK + S + + EF +E ++ +++
Sbjct: 26 LGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVVR 85
Query: 391 LFGFCFEDNNLLLVYDFLSRGSLEENLHGNKKDG-NAFG-----WTERYKVAVGVAEALD 444
L G + L+V + ++ G L+ L + + N G E ++A +A+ +
Sbjct: 86 LLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGMA 145
Query: 445 YLHNSCEQPVIHKDVKSSNILLSDDFEPQLSDFGLASWLSTSSSHLTCTDVAGTFGYLAP 504
YL+ + +H+++ + N +++ DF ++ DFG+ + + + ++AP
Sbjct: 146 YLN---AKKFVHRNLAARNCMVAHDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMAP 202
Query: 505 EYFMHGKVSEKIDVYAFGIVLLELLS 530
E G + D+++FG+VL E+ S
Sbjct: 203 ESLKDGVFTTSSDMWSFGVVLWEITS 228
>pdb|2J0K|A Chain A, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains.
pdb|2J0K|B Chain B, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains
Length = 656
Score = 57.0 bits (136), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 50/205 (24%), Positives = 93/205 (45%), Gaps = 15/205 (7%)
Query: 339 VGKGGHSHVYRGCL--PDGKELAVKILK----PSEDVLKEFASEIEIITALHHRNIISLF 392
+G+G V++G P+ +AV I S+ V ++F E + H +I+ L
Sbjct: 398 IGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLI 457
Query: 393 GFCFEDNNLLLVYDFLSRGSLEENLHGNKKDGNAFGWTERYKVAVGVAEALDYLHNSCEQ 452
G E N + ++ + + G L L K + A ++ AL YL + +
Sbjct: 458 GVITE-NPVWIIMELCTLGELRSFLQVRK---FSLDLASLILYAYQLSTALAYLES---K 510
Query: 453 PVIHKDVKSSNILLSDDFEPQLSDFGLASWLSTSSSHLTCTDVAGTFGYLAPEYFMHGKV 512
+H+D+ + N+L+S +L DFGL+ ++ S++ + ++APE +
Sbjct: 511 RFVHRDIAARNVLVSATDCVKLGDFGLSRYME-DSTYYKASKGKLPIKWMAPESINFRRF 569
Query: 513 SEKIDVYAFGIVLLE-LLSGKKPIN 536
+ DV+ FG+ + E L+ G KP
Sbjct: 570 TSASDVWMFGVCMWEILMHGVKPFQ 594
>pdb|2ESM|A Chain A, Crystal Structure Of Rock 1 Bound To Fasudil
pdb|2ESM|B Chain B, Crystal Structure Of Rock 1 Bound To Fasudil
pdb|2ETK|A Chain A, Crystal Structure Of Rock 1 Bound To Hydroxyfasudil
pdb|2ETK|B Chain B, Crystal Structure Of Rock 1 Bound To Hydroxyfasudil
pdb|2ETR|A Chain A, Crystal Structure Of Rock I Bound To Y-27632
pdb|2ETR|B Chain B, Crystal Structure Of Rock I Bound To Y-27632
pdb|3D9V|A Chain A, Crystal Structure Of Rock I Bound To H-1152p A Di-
Methylated Variant Of Fasudil
pdb|3D9V|B Chain B, Crystal Structure Of Rock I Bound To H-1152p A Di-
Methylated Variant Of Fasudil
pdb|3NCZ|A Chain A, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|B Chain B, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|C Chain C, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|D Chain D, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NDM|A Chain A, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|B Chain B, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|C Chain C, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|D Chain D, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
Length = 415
Score = 56.6 bits (135), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 54/201 (26%), Positives = 89/201 (44%), Gaps = 17/201 (8%)
Query: 356 KELAVKILKPSEDVLKE----FASEIEIITALHHRNIISLFGFCFEDNNLLLVYDFLSRG 411
K A+K+L E + + F E +I+ + ++ LF +D L +V +++ G
Sbjct: 100 KVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANSPWVVQLFYAFQDDRYLYMVMEYMPGG 159
Query: 412 SLEENLHGNKKDGNAFGWTERYKVAVGVAEALDYLHNSCEQPVIHKDVKSSNILLSDDFE 471
L NL N W Y V +A LD +H+ IH+DVK N+LL
Sbjct: 160 DLV-NLMSNYDVPEK--WARFYTAEVVLA--LDAIHS---MGFIHRDVKPDNMLLDKSGH 211
Query: 472 PQLSDFGLASWLSTSSSHLTCTDVAGTFGYLAPEYFM----HGKVSEKIDVYAFGIVLLE 527
+L+DFG ++ + C GT Y++PE G + D ++ G+ L E
Sbjct: 212 LKLADFGTCMKMN-KEGMVRCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYE 270
Query: 528 LLSGKKPINSENPKGQESLVM 548
+L G P +++ G S +M
Sbjct: 271 MLVGDTPFYADSLVGTYSKIM 291
>pdb|4DN5|A Chain A, Crystal Structure Of Nf-kb-inducing Kinase (nik)
pdb|4DN5|B Chain B, Crystal Structure Of Nf-kb-inducing Kinase (nik)
Length = 356
Score = 56.6 bits (135), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 61/205 (29%), Positives = 98/205 (47%), Gaps = 24/205 (11%)
Query: 339 VGKGGHSHVYRGCLPD---GKELAVKILKPSEDVLKEF-ASEIEIITALHHRNIISLFGF 394
+G+G V+R + D G + AVK ++ L+ F A E+ L I+ L+G
Sbjct: 82 LGRGSFGEVHR--MEDKQTGFQCAVKKVR-----LEVFRAEELMACAGLTSPRIVPLYGA 134
Query: 395 CFEDNNLLLVYDFLSRGSLEENLHGNKKDGNAFGWTERYKVAVGVA-EALDYLHNSCEQP 453
E + + + L GSL + + K+ G +R +G A E L+YLH+ +
Sbjct: 135 VREGPWVNIFMELLEGGSLGQLV---KEQGCLP--EDRALYYLGQALEGLEYLHS---RR 186
Query: 454 VIHKDVKSSNILLSDDF-EPQLSDFGLASWLST---SSSHLTCTDVAGTFGYLAPEYFMH 509
++H DVK+ N+LLS D L DFG A L LT + GT ++APE +
Sbjct: 187 ILHGDVKADNVLLSSDGSHAALCDFGHAVCLQPDGLGKDLLTGDYIPGTETHMAPEVVLG 246
Query: 510 GKVSEKIDVYAFGIVLLELLSGKKP 534
K+DV++ ++L +L+G P
Sbjct: 247 RSCDAKVDVWSSCCMMLHMLNGCHP 271
>pdb|1JQH|A Chain A, Igf-1 Receptor Kinase Domain
pdb|1JQH|B Chain B, Igf-1 Receptor Kinase Domain
pdb|1JQH|C Chain C, Igf-1 Receptor Kinase Domain
Length = 308
Score = 56.6 bits (135), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 42/204 (20%), Positives = 99/204 (48%), Gaps = 17/204 (8%)
Query: 339 VGKGGHSHVY----RGCLPDGKE--LAVKILKPSEDVLK--EFASEIEIITALHHRNIIS 390
+G+G VY +G + D E +A+K + + + + EF +E ++ + +++
Sbjct: 27 LGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVR 86
Query: 391 LFGFCFEDNNLLLVYDFLSRGSLEENLHGNKKD--GNAF----GWTERYKVAVGVAEALD 444
L G + L++ + ++RG L+ L + + N ++ ++A +A+ +
Sbjct: 87 LLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIADGMA 146
Query: 445 YLHNSCEQPVIHKDVKSSNILLSDDFEPQLSDFGLASWLSTSSSHLTCTDVAGTFGYLAP 504
YL+ + +H+D+ + N ++++DF ++ DFG+ + + + +++P
Sbjct: 147 YLNAN---KFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMSP 203
Query: 505 EYFMHGKVSEKIDVYAFGIVLLEL 528
E G + DV++FG+VL E+
Sbjct: 204 ESLKDGVFTTYSDVWSFGVVLWEI 227
>pdb|2PZY|A Chain A, Structure Of Mk2 Complexed With Compound 76
pdb|2PZY|B Chain B, Structure Of Mk2 Complexed With Compound 76
pdb|2PZY|C Chain C, Structure Of Mk2 Complexed With Compound 76
pdb|2PZY|D Chain D, Structure Of Mk2 Complexed With Compound 76
pdb|3KC3|A Chain A, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|B Chain B, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|C Chain C, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|D Chain D, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|E Chain E, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|F Chain F, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|G Chain G, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|H Chain H, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|I Chain I, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|J Chain J, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|K Chain K, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|L Chain L, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3A2C|A Chain A, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|B Chain B, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|C Chain C, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|D Chain D, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|E Chain E, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|F Chain F, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|G Chain G, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|H Chain H, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|I Chain I, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|J Chain J, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|K Chain K, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|L Chain L, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
Length = 324
Score = 56.6 bits (135), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 42/143 (29%), Positives = 69/143 (48%), Gaps = 13/143 (9%)
Query: 401 LLLVYDFLSRGSLEENLHGNKKDGNAFGWTERYKVAVGVAEALDYLHNSCEQPVIHKDVK 460
LL+V + L G L + + AF E ++ + EA+ YLH+ + H+DVK
Sbjct: 94 LLIVMECLDGGELFSRIQD--RGDQAFTEREASEIMKSIGEAIQYLHSIN---IAHRDVK 148
Query: 461 SSNILLSDDFEP----QLSDFGLASWLSTSSSHLTCTDVAGTFGYLAPEYFMHGKVSEKI 516
N+L + P +L+DFG A ++SH + T T Y+APE K +
Sbjct: 149 PENLLYTSK-RPNAILKLTDFGFAK---ETTSHNSLTTPCYTPYYVAPEVLGPEKYDKSC 204
Query: 517 DVYAFGIVLLELLSGKKPINSEN 539
D+++ G+++ LL G P S +
Sbjct: 205 DMWSLGVIMYILLCGYPPFYSNH 227
>pdb|4G3G|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) V408l Bound To A 2-(aminothiazolyl)phenol (cmp3)
Length = 350
Score = 56.6 bits (135), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 61/205 (29%), Positives = 97/205 (47%), Gaps = 24/205 (11%)
Query: 339 VGKGGHSHVYRGCLPD---GKELAVKILKPSEDVLKEF-ASEIEIITALHHRNIISLFGF 394
+G+G V+R + D G + AVK ++ L+ F E+ L I+ L+G
Sbjct: 80 LGRGSFGEVHR--MKDKQTGFQCAVKKVR-----LEVFRVEELVACAGLSSPRIVPLYGA 132
Query: 395 CFEDNNLLLVYDFLSRGSLEENLHGNKKDGNAFGWTERYKVAVGVA-EALDYLHNSCEQP 453
E + + + L GSL + + K+ G +R +G A E L+YLH +
Sbjct: 133 VREGPWVNIFMELLEGGSLGQLI---KQMGCLP--EDRALYYLGQALEGLEYLHT---RR 184
Query: 454 VIHKDVKSSNILLSDDF-EPQLSDFGLASWL---STSSSHLTCTDVAGTFGYLAPEYFMH 509
++H DVK+ N+LLS D L DFG A L S LT + GT ++APE M
Sbjct: 185 ILHGDVKADNVLLSSDGSRAALCDFGHALCLQPDGLGKSLLTGDYIPGTETHMAPEVVMG 244
Query: 510 GKVSEKIDVYAFGIVLLELLSGKKP 534
K+D+++ ++L +L+G P
Sbjct: 245 KPCDAKVDIWSSCCMMLHMLNGCHP 269
>pdb|2ZM3|A Chain A, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|B Chain B, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|C Chain C, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|D Chain D, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|3F5P|A Chain A, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|B Chain B, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|C Chain C, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|D Chain D, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|E Chain E, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|F Chain F, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|G Chain G, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|H Chain H, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|I Chain I, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|J Chain J, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|K Chain K, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|M Chain M, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|L Chain L, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|R Chain R, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|S Chain S, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|T Chain T, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
Length = 308
Score = 56.6 bits (135), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 42/204 (20%), Positives = 98/204 (48%), Gaps = 17/204 (8%)
Query: 339 VGKGGHSHVY----RGCLPDGKE--LAVKILKPSEDVLK--EFASEIEIITALHHRNIIS 390
+G+G VY +G + D E +A+K + + + + EF +E ++ + +++
Sbjct: 27 LGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVR 86
Query: 391 LFGFCFEDNNLLLVYDFLSRGSLEENLHGNKKD--GNAF----GWTERYKVAVGVAEALD 444
L G + L++ + ++RG L+ L + + N ++ ++A +A+ +
Sbjct: 87 LLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIADGMA 146
Query: 445 YLHNSCEQPVIHKDVKSSNILLSDDFEPQLSDFGLASWLSTSSSHLTCTDVAGTFGYLAP 504
YL+ + +H+D+ + N ++++DF ++ DFG+ + + +++P
Sbjct: 147 YLNAN---KFVHRDLAARNCMVAEDFTVKIGDFGMTRDIXETDXXRKGGKGLLPVRWMSP 203
Query: 505 EYFMHGKVSEKIDVYAFGIVLLEL 528
E G + DV++FG+VL E+
Sbjct: 204 ESLKDGVFTTYSDVWSFGVVLWEI 227
>pdb|1GII|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|1GIJ|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|2DS1|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
Length = 298
Score = 56.2 bits (134), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 51/200 (25%), Positives = 96/200 (48%), Gaps = 15/200 (7%)
Query: 339 VGKGGHSHVY--RGCLPDGKELAVKILK---PSEDVLKEFASEIEIITALHHRNIISLFG 393
+G+G + VY R L G+ +A+K ++ +E V EI ++ L+H NI+ L
Sbjct: 10 IGEGTYGVVYKARNKL-TGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLD 68
Query: 394 FCFEDNNLLLVYDFLSRGSLEENLHGNKKDGNAFGWTERYKVAVGVAEALDYLHNSCEQP 453
+N L LV++ + + L+ + + G + Y + + L + H+
Sbjct: 69 VIHTENKLYLVFEHVHQ-DLKTFMDASALTGIPLPLIKSY--LFQLLQGLAFCHS---HR 122
Query: 454 VIHKDVKSSNILLSDDFEPQLSDFGLASWLSTSSSHLTCTDVAGTFGYLAPEYFMHGK-V 512
V+H+D+K N+L++ + +L+DFGLA T T T Y APE + K
Sbjct: 123 VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVR--TYTHEVVTLWYRAPEILLGCKYY 180
Query: 513 SEKIDVYAFGIVLLELLSGK 532
S +D+++ G + E+++ +
Sbjct: 181 STAVDIWSLGCIFAEMVTRR 200
>pdb|1KWP|A Chain A, Crystal Structure Of Mapkap2
pdb|1KWP|B Chain B, Crystal Structure Of Mapkap2
pdb|1NY3|A Chain A, Crystal Structure Of Adp Bound To Map Kap Kinase 2
Length = 400
Score = 56.2 bits (134), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 42/143 (29%), Positives = 69/143 (48%), Gaps = 13/143 (9%)
Query: 401 LLLVYDFLSRGSLEENLHGNKKDGNAFGWTERYKVAVGVAEALDYLHNSCEQPVIHKDVK 460
LL+V + L G L + + AF E ++ + EA+ YLH+ + H+DVK
Sbjct: 134 LLIVMECLDGGELFSRIQD--RGDQAFTEREASEIMKSIGEAIQYLHSIN---IAHRDVK 188
Query: 461 SSNILLSDDFEP----QLSDFGLASWLSTSSSHLTCTDVAGTFGYLAPEYFMHGKVSEKI 516
N+L + P +L+DFG A ++SH + T T Y+APE K +
Sbjct: 189 PENLLYTSK-RPNAILKLTDFGFAK---ETTSHNSLTTPCYTPYYVAPEVLGPEKYDKSC 244
Query: 517 DVYAFGIVLLELLSGKKPINSEN 539
D+++ G+++ LL G P S +
Sbjct: 245 DMWSLGVIMYILLCGYPPFYSNH 267
>pdb|3FPM|A Chain A, Crystal Structure Of A Squarate Inhibitor Bound To Mapkap
Kinase-2
Length = 325
Score = 56.2 bits (134), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 42/143 (29%), Positives = 69/143 (48%), Gaps = 13/143 (9%)
Query: 401 LLLVYDFLSRGSLEENLHGNKKDGNAFGWTERYKVAVGVAEALDYLHNSCEQPVIHKDVK 460
LL+V + L G L + + AF E ++ + EA+ YLH+ + H+DVK
Sbjct: 95 LLIVMECLDGGELFSRIQD--RGDQAFTEREASEIMKSIGEAIQYLHSIN---IAHRDVK 149
Query: 461 SSNILLSDDFEP----QLSDFGLASWLSTSSSHLTCTDVAGTFGYLAPEYFMHGKVSEKI 516
N+L + P +L+DFG A ++SH + T T Y+APE K +
Sbjct: 150 PENLLYTSK-RPNAILKLTDFGFAK---ETTSHNSLTTPCYTPYYVAPEVLGPEKYDKSC 205
Query: 517 DVYAFGIVLLELLSGKKPINSEN 539
D+++ G+++ LL G P S +
Sbjct: 206 DMWSLGVIMYILLCGYPPFYSNH 228
>pdb|2JBO|A Chain A, Protein Kinase Mk2 In Complex With An Inhibitor (Crystal
Form-1, Soaking)
pdb|2JBP|A Chain A, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|B Chain B, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|C Chain C, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|D Chain D, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|E Chain E, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|F Chain F, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|G Chain G, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|H Chain H, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|I Chain I, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|J Chain J, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|K Chain K, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|L Chain L, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
Length = 326
Score = 56.2 bits (134), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 42/143 (29%), Positives = 69/143 (48%), Gaps = 13/143 (9%)
Query: 401 LLLVYDFLSRGSLEENLHGNKKDGNAFGWTERYKVAVGVAEALDYLHNSCEQPVIHKDVK 460
LL+V + L G L + + AF E ++ + EA+ YLH+ + H+DVK
Sbjct: 96 LLIVMECLDGGELFSRIQD--RGDQAFTEREASEIMKSIGEAIQYLHSIN---IAHRDVK 150
Query: 461 SSNILLSDDFEP----QLSDFGLASWLSTSSSHLTCTDVAGTFGYLAPEYFMHGKVSEKI 516
N+L + P +L+DFG A ++SH + T T Y+APE K +
Sbjct: 151 PENLLYTSK-RPNAILKLTDFGFAK---ETTSHNSLTTPCYTPYYVAPEVLGPEKYDKSC 206
Query: 517 DVYAFGIVLLELLSGKKPINSEN 539
D+++ G+++ LL G P S +
Sbjct: 207 DMWSLGVIMYILLCGYPPFYSNH 229
>pdb|3L9M|A Chain A, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 18
pdb|3L9M|B Chain B, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 18
pdb|3L9N|A Chain A, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 27
Length = 351
Score = 56.2 bits (134), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 51/191 (26%), Positives = 96/191 (50%), Gaps = 18/191 (9%)
Query: 355 GKELAVKILKPSEDV-LKEFA---SEIEIITALHHRNIISLFGFCFEDN-NLLLVYDFLS 409
G A+KIL + V LK+ +E I+ A++ ++ L F F+DN NL +V ++
Sbjct: 67 GNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKL-EFSFKDNSNLYMVMEYAP 125
Query: 410 RGSLEENLHGNKKDGNAFGWTERYKVAVGVAEALDYLHNSCEQPVIHKDVKSSNILLSDD 469
G + +L ++ G R+ A + +YLH+ +I++D+K N+++
Sbjct: 126 GGEMFSHL---RRIGRFSEPHARF-YAAQIVLTFEYLHSL---DLIYRDLKPENLMIDQQ 178
Query: 470 FEPQLSDFGLASWLSTSSSHLTCTDVAGTFGYLAPEYFMHGKVSEKIDVYAFGIVLLELL 529
+++DFG A + + L C GT YLAPE + ++ +D +A G+++ E+
Sbjct: 179 GYIKVTDFGFAKRVKGRTWXL-C----GTPEYLAPEIILSKGYNKAVDWWALGVLIYEMA 233
Query: 530 SGKKPINSENP 540
+G P ++ P
Sbjct: 234 AGYPPFFADQP 244
>pdb|2P3G|X Chain X, Crystal Structure Of A Pyrrolopyridine Inhibitor Bound To
Mapkap Kinase-2
pdb|3FYJ|X Chain X, Crystal Structure Of An Optimzied Benzothiophene Inhibitor
Bound To Mapkap Kinase-2 (Mk-2)
pdb|3FYK|X Chain X, Crystal Structure Of A Benzthiophene Lead Bound To Mapkap
Kinase-2 (Mk-2)
Length = 327
Score = 56.2 bits (134), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 42/143 (29%), Positives = 69/143 (48%), Gaps = 13/143 (9%)
Query: 401 LLLVYDFLSRGSLEENLHGNKKDGNAFGWTERYKVAVGVAEALDYLHNSCEQPVIHKDVK 460
LL+V + L G L + + AF E ++ + EA+ YLH+ + H+DVK
Sbjct: 90 LLIVMECLDGGELFSRIQD--RGDQAFTEREASEIMKSIGEAIQYLHSI---NIAHRDVK 144
Query: 461 SSNILLSDDFEP----QLSDFGLASWLSTSSSHLTCTDVAGTFGYLAPEYFMHGKVSEKI 516
N+L + P +L+DFG A ++SH + T T Y+APE K +
Sbjct: 145 PENLLYTSK-RPNAILKLTDFGFAK---ETTSHNSLTTPCYTPYYVAPEVLGPEKYDKSC 200
Query: 517 DVYAFGIVLLELLSGKKPINSEN 539
D+++ G+++ LL G P S +
Sbjct: 201 DMWSLGVIMYILLCGYPPFYSNH 223
>pdb|3R2B|A Chain A, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|B Chain B, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|C Chain C, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|D Chain D, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|E Chain E, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|F Chain F, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|G Chain G, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|H Chain H, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|I Chain I, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|J Chain J, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|K Chain K, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|L Chain L, Mk2 Kinase Bound To Compound 5b
Length = 318
Score = 56.2 bits (134), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 42/143 (29%), Positives = 69/143 (48%), Gaps = 13/143 (9%)
Query: 401 LLLVYDFLSRGSLEENLHGNKKDGNAFGWTERYKVAVGVAEALDYLHNSCEQPVIHKDVK 460
LL+V + L G L + + AF E ++ + EA+ YLH+ + H+DVK
Sbjct: 88 LLIVMECLDGGELFSRIQD--RGDQAFTEREASEIMKSIGEAIQYLHSI---NIAHRDVK 142
Query: 461 SSNILLSDDFEP----QLSDFGLASWLSTSSSHLTCTDVAGTFGYLAPEYFMHGKVSEKI 516
N+L + P +L+DFG A ++SH + T T Y+APE K +
Sbjct: 143 PENLLYTSK-RPNAILKLTDFGFAK---ETTSHNSLTTPCYTPYYVAPEVLGPEKYDKSC 198
Query: 517 DVYAFGIVLLELLSGKKPINSEN 539
D+++ G+++ LL G P S +
Sbjct: 199 DMWSLGVIMYILLCGYPPFYSNH 221
>pdb|2ONL|C Chain C, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|D Chain D, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
Length = 406
Score = 56.2 bits (134), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 42/143 (29%), Positives = 69/143 (48%), Gaps = 13/143 (9%)
Query: 401 LLLVYDFLSRGSLEENLHGNKKDGNAFGWTERYKVAVGVAEALDYLHNSCEQPVIHKDVK 460
LL+V + L G L + + AF E ++ + EA+ YLH+ + H+DVK
Sbjct: 140 LLIVMECLDGGELFSRIQD--RGDQAFTEREASEIMKSIGEAIQYLHSIN---IAHRDVK 194
Query: 461 SSNILLSDDFEP----QLSDFGLASWLSTSSSHLTCTDVAGTFGYLAPEYFMHGKVSEKI 516
N+L + P +L+DFG A ++SH + T T Y+APE K +
Sbjct: 195 PENLLYTSK-RPNAILKLTDFGFAK---ETTSHNSLTTPCYTPYYVAPEVLGPEKYDKSC 250
Query: 517 DVYAFGIVLLELLSGKKPINSEN 539
D+++ G+++ LL G P S +
Sbjct: 251 DMWSLGVIMYILLCGYPPFYSNH 273
>pdb|1Q61|A Chain A, Pka Triple Mutant Model Of Pkb
Length = 350
Score = 56.2 bits (134), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 51/191 (26%), Positives = 96/191 (50%), Gaps = 18/191 (9%)
Query: 355 GKELAVKILKPSEDV-LKEFA---SEIEIITALHHRNIISLFGFCFEDN-NLLLVYDFLS 409
G A+KIL + V LK+ +E I+ A++ ++ L F F+DN NL +V ++
Sbjct: 66 GNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKL-EFSFKDNSNLYMVMEYAP 124
Query: 410 RGSLEENLHGNKKDGNAFGWTERYKVAVGVAEALDYLHNSCEQPVIHKDVKSSNILLSDD 469
G + +L ++ G R+ A + +YLH+ +I++D+K N+++
Sbjct: 125 GGEMFSHL---RRIGRFSEPHARF-YAAQIVLTFEYLHSL---DLIYRDLKPENLMIDQQ 177
Query: 470 FEPQLSDFGLASWLSTSSSHLTCTDVAGTFGYLAPEYFMHGKVSEKIDVYAFGIVLLELL 529
+++DFG A + + L C GT YLAPE + ++ +D +A G+++ E+
Sbjct: 178 GYIKVTDFGFAKRVKGRTWXL-C----GTPEYLAPEIILSKGYNKAVDWWALGVLIYEMA 232
Query: 530 SGKKPINSENP 540
+G P ++ P
Sbjct: 233 AGYPPFFADQP 243
>pdb|3R2Y|A Chain A, Mk2 Kinase Bound To Compound 1
pdb|3R30|A Chain A, Mk2 Kinase Bound To Compound 2
Length = 319
Score = 56.2 bits (134), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 42/143 (29%), Positives = 69/143 (48%), Gaps = 13/143 (9%)
Query: 401 LLLVYDFLSRGSLEENLHGNKKDGNAFGWTERYKVAVGVAEALDYLHNSCEQPVIHKDVK 460
LL+V + L G L + + AF E ++ + EA+ YLH+ + H+DVK
Sbjct: 89 LLIVMECLDGGELFSRIQD--RGDQAFTEREASEIMKSIGEAIQYLHSI---NIAHRDVK 143
Query: 461 SSNILLSDDFEP----QLSDFGLASWLSTSSSHLTCTDVAGTFGYLAPEYFMHGKVSEKI 516
N+L + P +L+DFG A ++SH + T T Y+APE K +
Sbjct: 144 PENLLYTSK-RPNAILKLTDFGFAK---ETTSHNSLTTPCYTPYYVAPEVLGPEKYDKSC 199
Query: 517 DVYAFGIVLLELLSGKKPINSEN 539
D+++ G+++ LL G P S +
Sbjct: 200 DMWSLGVIMYILLCGYPPFYSNH 222
>pdb|2OZA|A Chain A, Structure Of P38alpha Complex
Length = 356
Score = 56.2 bits (134), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 42/143 (29%), Positives = 69/143 (48%), Gaps = 13/143 (9%)
Query: 401 LLLVYDFLSRGSLEENLHGNKKDGNAFGWTERYKVAVGVAEALDYLHNSCEQPVIHKDVK 460
LL+V + L G L + + AF E ++ + EA+ YLH+ + H+DVK
Sbjct: 90 LLIVMECLDGGELFSRIQD--RGDQAFTEREASEIMKSIGEAIQYLHSIN---IAHRDVK 144
Query: 461 SSNILLSDDFEP----QLSDFGLASWLSTSSSHLTCTDVAGTFGYLAPEYFMHGKVSEKI 516
N+L + P +L+DFG A ++SH + T T Y+APE K +
Sbjct: 145 PENLLYTSK-RPNAILKLTDFGFAK---ETTSHNSLTTPCYTPYYVAPEVLGPEKYDKSC 200
Query: 517 DVYAFGIVLLELLSGKKPINSEN 539
D+++ G+++ LL G P S +
Sbjct: 201 DMWSLGVIMYILLCGYPPFYSNH 223
>pdb|4EUT|A Chain A, Structure Of Bx-795 Complexed With Unphosphorylated Human
Tbk1 Kinase- Uld Domain
pdb|4EUT|B Chain B, Structure Of Bx-795 Complexed With Unphosphorylated Human
Tbk1 Kinase- Uld Domain
Length = 396
Score = 56.2 bits (134), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 55/226 (24%), Positives = 109/226 (48%), Gaps = 33/226 (14%)
Query: 338 LVGKGGHSHVYRG-CLPDGKELAVKI------LKPSEDVLKEFASEIEIITALHHRNIIS 390
++G+G ++V+RG G A+K+ L+P + ++EF E++ L+H+NI+
Sbjct: 16 ILGQGATANVFRGRHKKTGDLFAIKVFNNISFLRPVDVQMREF----EVLKKLNHKNIVK 71
Query: 391 LFGFCFEDN--NLLLVYDFLSRGSLEENLHGNKKDGNAFGWTERYKVAVGVAEALDYLHN 448
LF E + +L+ +F GSL L ++ NA+G E + V + + + +++
Sbjct: 72 LFAIEEETTTRHKVLIMEFCPCGSLYTVL---EEPSNAYGLPESEFLIV-LRDVVGGMNH 127
Query: 449 SCEQPVIHKDVKSSNIL--LSDDFEP--QLSDFGLASWLSTSSSHLTCTDVAGTFGYLAP 504
E ++H+++K NI+ + +D + +L+DFG A L ++ + GT YL P
Sbjct: 128 LRENGIVHRNIKPGNIMRVIGEDGQSVYKLTDFGAARELEDDEQFVS---LYGTEEYLHP 184
Query: 505 EYFMHG--------KVSEKIDVYAFGIVLLELLSGKKPINS-ENPK 541
+ + K +D+++ G+ +G P E P+
Sbjct: 185 DMYERAVLRKDHQKKYGATVDLWSIGVTFYHAATGSLPFRPFEGPR 230
>pdb|2X4F|A Chain A, The Crystal Structure Of The Human Myosin Light Chain
Kinase Loc340156.
pdb|2X4F|B Chain B, The Crystal Structure Of The Human Myosin Light Chain
Kinase Loc340156
Length = 373
Score = 56.2 bits (134), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 57/209 (27%), Positives = 98/209 (46%), Gaps = 19/209 (9%)
Query: 338 LVGKGGHSHVYRGC--LPDGKELAVKILKPSEDVLKE-FASEIEIITALHHRNIISLFGF 394
++G G V++ C G +LA KI+K KE +EI ++ L H N+I L+
Sbjct: 96 ILGGGRFGQVHK-CEETATGLKLAAKIIKTRGMKDKEEVKNEISVMNQLDHANLIQLYDA 154
Query: 395 CFEDNNLLLVYDFLSRGSLEENLHGNKKDGNAFGWTERYKVAV--GVAEALDYLHNSCEQ 452
N+++LV +++ G L + + ++ TE + + E + ++H +
Sbjct: 155 FESKNDIVLVMEYVDGGELFDRIIDE-----SYNLTELDTILFMKQICEGIRHMH---QM 206
Query: 453 PVIHKDVKSSNILL--SDDFEPQLSDFGLASWLSTSSSHLTCTDVAGTFGYLAPEYFMHG 510
++H D+K NIL D + ++ DFGLA L GT +LAPE +
Sbjct: 207 YILHLDLKPENILCVNRDAKQIKIIDFGLARRYKPREK-LKVN--FGTPEFLAPEVVNYD 263
Query: 511 KVSEKIDVYAFGIVLLELLSGKKPINSEN 539
VS D+++ G++ LLSG P +N
Sbjct: 264 FVSFPTDMWSVGVIAYMLLSGLSPFLGDN 292
>pdb|3LVP|A Chain A, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|B Chain B, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|C Chain C, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|D Chain D, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
Length = 336
Score = 55.8 bits (133), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 42/204 (20%), Positives = 99/204 (48%), Gaps = 17/204 (8%)
Query: 339 VGKGGHSHVY----RGCLPDGKE--LAVKILKPSEDVLK--EFASEIEIITALHHRNIIS 390
+G+G VY +G + D E +A+K + + + + EF +E ++ + +++
Sbjct: 55 LGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVR 114
Query: 391 LFGFCFEDNNLLLVYDFLSRGSLEENLHGNK--KDGNAF----GWTERYKVAVGVAEALD 444
L G + L++ + ++RG L+ L + + N ++ ++A +A+ +
Sbjct: 115 LLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIADGMA 174
Query: 445 YLHNSCEQPVIHKDVKSSNILLSDDFEPQLSDFGLASWLSTSSSHLTCTDVAGTFGYLAP 504
YL+ + +H+D+ + N ++++DF ++ DFG+ + + + +++P
Sbjct: 175 YLNAN---KFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMSP 231
Query: 505 EYFMHGKVSEKIDVYAFGIVLLEL 528
E G + DV++FG+VL E+
Sbjct: 232 ESLKDGVFTTYSDVWSFGVVLWEI 255
>pdb|3GOK|A Chain A, Binding Site Mapping Of Protein Ligands
pdb|3GOK|B Chain B, Binding Site Mapping Of Protein Ligands
pdb|3GOK|C Chain C, Binding Site Mapping Of Protein Ligands
pdb|3GOK|D Chain D, Binding Site Mapping Of Protein Ligands
pdb|3GOK|E Chain E, Binding Site Mapping Of Protein Ligands
pdb|3GOK|F Chain F, Binding Site Mapping Of Protein Ligands
pdb|3GOK|G Chain G, Binding Site Mapping Of Protein Ligands
pdb|3GOK|H Chain H, Binding Site Mapping Of Protein Ligands
pdb|3GOK|I Chain I, Binding Site Mapping Of Protein Ligands
pdb|3GOK|J Chain J, Binding Site Mapping Of Protein Ligands
pdb|3GOK|K Chain K, Binding Site Mapping Of Protein Ligands
pdb|3GOK|L Chain L, Binding Site Mapping Of Protein Ligands
Length = 334
Score = 55.8 bits (133), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 42/143 (29%), Positives = 69/143 (48%), Gaps = 13/143 (9%)
Query: 401 LLLVYDFLSRGSLEENLHGNKKDGNAFGWTERYKVAVGVAEALDYLHNSCEQPVIHKDVK 460
LL+V + L G L + + AF E ++ + EA+ YLH+ + H+DVK
Sbjct: 104 LLIVMECLDGGELFSRIQ--DRGDQAFTEREASEIMKSIGEAIQYLHSIN---IAHRDVK 158
Query: 461 SSNILLSDDFEP----QLSDFGLASWLSTSSSHLTCTDVAGTFGYLAPEYFMHGKVSEKI 516
N+L + P +L+DFG A ++SH + T T Y+APE K +
Sbjct: 159 PENLLYTSK-RPNAILKLTDFGFAK---ETTSHNSLTTPCYTPYYVAPEVLGPEKYDKSC 214
Query: 517 DVYAFGIVLLELLSGKKPINSEN 539
D+++ G+++ LL G P S +
Sbjct: 215 DMWSLGVIMYILLCGYPPFYSNH 237
>pdb|3MTL|A Chain A, Crystal Structure Of The Pctaire1 Kinase In Complex With
Ind E804
Length = 324
Score = 55.8 bits (133), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 52/198 (26%), Positives = 93/198 (46%), Gaps = 13/198 (6%)
Query: 339 VGKGGHSHVYRGC--LPDGKELAVKI-LKPSEDVLKEFASEIEIITALHHRNIISLFGFC 395
+G+G ++ VY+G L D +I L+ E E+ ++ L H NI++L
Sbjct: 10 LGEGTYATVYKGKSKLTDNLVALKEIRLEHEEGAPCTAIREVSLLKDLKHANIVTLHDII 69
Query: 396 FEDNNLLLVYDFLSRGSLEENLHGNKKDGNAFGWTERYKVAVGVAEALDYLHNSCEQPVI 455
+ +L LV+++L + L++ L GN + L Y H Q V+
Sbjct: 70 HTEKSLTLVFEYLDK-DLKQYLDDC---GNIINMHNVKLFLFQLLRGLAYCHR---QKVL 122
Query: 456 HKDVKSSNILLSDDFEPQLSDFGLASWLSTSSSHLTCTDVAGTFGYLAPEYFMHGK-VSE 514
H+D+K N+L+++ E +L+DFGLA S + T + T Y P+ + S
Sbjct: 123 HRDLKPQNLLINERGELKLADFGLARAKSIPTK--TYDNEVVTLWYRPPDILLGSTDYST 180
Query: 515 KIDVYAFGIVLLELLSGK 532
+ID++ G + E+ +G+
Sbjct: 181 QIDMWGVGCIFYEMATGR 198
>pdb|3KVW|A Chain A, Crystal Structure Of Dual-Specificity Tyrosine
Phosphorylation Regulated Kinase 2 (Dyrk2) In Complex
With An Indirubin Ligand
Length = 429
Score = 55.8 bits (133), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 55/206 (26%), Positives = 95/206 (46%), Gaps = 26/206 (12%)
Query: 338 LVGKGGHSHVYRGCLPDGK---ELAVKILKPSEDVLKEFASEIEIITALHHR------NI 388
++GKG V + D K +A+K+++ + ++ A EI I+ L + N+
Sbjct: 104 VIGKGSFGQVVKAY--DHKVHQHVALKMVRNEKRFHRQAAEEIRILEHLRKQDKDNTMNV 161
Query: 389 ISLF-GFCFEDNNLLLVYDFLSRGSLEENLHGNKKDGNAFGWTERYKVAVGVAEALDYLH 447
I + F F N++ + ++ LS +L E + NK G + ++ A + + LD LH
Sbjct: 162 IHMLENFTFR-NHICMTFELLSM-NLYELIKKNKFQGFSLPLVRKF--AHSILQCLDALH 217
Query: 448 NSCEQPVIHKDVKSSNILLSDDFEPQLS--DFGLASWLSTSSSHLTCTDVAGTFGYLAPE 505
+ +IH D+K NILL + DFG S+ H + Y APE
Sbjct: 218 KN---RIIHCDLKPENILLKQQGRSGIKVIDFG-----SSCYEHQRVYTXIQSRFYRAPE 269
Query: 506 YFMHGKVSEKIDVYAFGIVLLELLSG 531
+ + ID+++ G +L ELL+G
Sbjct: 270 VILGARYGMPIDMWSLGCILAELLTG 295
>pdb|4EUU|A Chain A, Structure Of Bx-795 Complexed With Human Tbk1 Kinase
Domain Phosphorylated On Ser172
pdb|4EUU|B Chain B, Structure Of Bx-795 Complexed With Human Tbk1 Kinase
Domain Phosphorylated On Ser172
Length = 319
Score = 55.8 bits (133), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 74/319 (23%), Positives = 146/319 (45%), Gaps = 48/319 (15%)
Query: 329 ATSN--FLPEYLVGKGGHSHVYRG-CLPDGKELAVKI------LKPSEDVLKEFASEIEI 379
+TSN +L ++G+G ++V+RG G A+K+ L+P + ++EF E+
Sbjct: 5 STSNHLWLLSDILGQGATANVFRGRHKKTGDLFAIKVFNNISFLRPVDVQMREF----EV 60
Query: 380 ITALHHRNIISLFGFCFEDN--NLLLVYDFLSRGSLEENLHGNKKDGNAFGWTERYKVAV 437
+ L+H+NI+ LF E + +L+ +F GSL L ++ NA+G E + V
Sbjct: 61 LKKLNHKNIVKLFAIEEETTTRHKVLIMEFCPCGSLYTVL---EEPSNAYGLPESEFLIV 117
Query: 438 GVAEALDYLHNSCEQPVIHKDVKSSNIL--LSDDFEP--QLSDFGLASWLSTSSSHLTCT 493
+ + + +++ E ++H+++K NI+ + +D + +L+DFG A L +
Sbjct: 118 -LRDVVGGMNHLRENGIVHRNIKPGNIMRVIGEDGQSVYKLTDFGAARELEDDEQFVX-- 174
Query: 494 DVAGTFGYLAPEYFMHG--------KVSEKIDVYAFGIVLLELLSGKKPINS-ENPKGQE 544
+ GT YL P+ + K +D+++ G+ +G P E P+ +
Sbjct: 175 -LYGTEEYLHPDMYERAVLRKDHQKKYGATVDLWSIGVTFYHAATGSLPFRPFEGPRRNK 233
Query: 545 SL---VMWAKPILKDGKVSQLLDPSLDTDYDNDQIERMVLAATLSISRAPTVRPQINLVL 601
+ ++ KP V + + +D D M ++ +LS + P ++
Sbjct: 234 EVMYKIITGKPSGAISGVQKAENGPIDWSGD------MPVSCSLSRGLQVLLTP---VLA 284
Query: 602 KLLQGDEEAANWAKEQVSA 620
+L+ D+E W +Q A
Sbjct: 285 NILEADQEKC-WGFDQFFA 302
>pdb|2UVY|A Chain A, Structure Of Pka-pkb Chimera Complexed With Methyl-(4-(9h-
Purin-6-yl)-benzyl)-amine
pdb|2UVZ|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
C-Phenyl-C-(4-( 9h-Purin-6-Yl)-Phenyl)-Methylamine
pdb|2UW0|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 6-(4-(4-(4-
Chloro-Phenyl)-Piperidin-4-Yl)-Phenyl)-9h-Purine
pdb|2UW3|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 5-Methyl-4-
Phenyl-1h-Pyrazole
pdb|2UW5|A Chain A, Structure Of Pka-Pkb Chimera Complexed With (R)-2-(4-
Chloro-Phenyl)-2-(4-1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW6|A Chain A, Structure Of Pka-Pkb Chimera Complexed With (S)-2-(4-
Chloro-Phenyl)-2-(4-1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW8|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 2-(4-Chloro-
Phenyl)-2-Phenyl-Ethylamine
pdb|2VNW|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
(1-(9h-Purin-6- Yl)piperidin-4-Yl)methanamine
pdb|2VNY|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
(1-(9h-Purin-6- Yl)piperidin-4-Yl)amine
pdb|2VO3|A Chain A, Structure Of Pka-Pkb Chimera Complexed With C-(4-(4-
Chlorophenyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Yl)methylamine
pdb|2VO6|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 4-(4-
Chlorobenzyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Ylamine
Length = 351
Score = 55.5 bits (132), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 51/191 (26%), Positives = 95/191 (49%), Gaps = 18/191 (9%)
Query: 355 GKELAVKILKPSEDV-LKEFA---SEIEIITALHHRNIISLFGFCFEDN-NLLLVYDFLS 409
G A+KIL + V LK+ +E I+ A++ + L F F+DN NL +V ++
Sbjct: 67 GNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLTKL-EFSFKDNSNLYMVMEYAP 125
Query: 410 RGSLEENLHGNKKDGNAFGWTERYKVAVGVAEALDYLHNSCEQPVIHKDVKSSNILLSDD 469
G + +L ++ G R+ A + +YLH+ +I++D+K N+++
Sbjct: 126 GGEMFSHL---RRIGRFXEPHARF-YAAQIVLTFEYLHSL---DLIYRDLKPENLMIDQQ 178
Query: 470 FEPQLSDFGLASWLSTSSSHLTCTDVAGTFGYLAPEYFMHGKVSEKIDVYAFGIVLLELL 529
+++DFG A + + L C GT YLAPE + ++ +D +A G+++ E+
Sbjct: 179 GYIKVTDFGFAKRVKGRTWXL-C----GTPEYLAPEIILSKGYNKAVDWWALGVLIYEMA 233
Query: 530 SGKKPINSENP 540
+G P ++ P
Sbjct: 234 AGYPPFFADQP 244
>pdb|3E7O|A Chain A, Crystal Structure Of Jnk2
pdb|3E7O|B Chain B, Crystal Structure Of Jnk2
Length = 360
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 59/217 (27%), Positives = 105/217 (48%), Gaps = 31/217 (14%)
Query: 355 GKELAVKIL-KPSEDVL--KEFASEIEIITALHHRNIISLFGFC--------FEDNNLLL 403
G +AVK L +P ++ K E+ ++ ++H+NIISL F+D L++
Sbjct: 47 GINVAVKKLSRPFQNQTHAKRAYRELVLLKCVNHKNIISLLNVFTPQKTLEEFQDVYLVM 106
Query: 404 VYDFLSRGSLEENLHGNKKDGNAFGWTERYKVAVGVAEALDYLHNSCEQPVIHKDVKSSN 463
L +L + +H + D + Y++ G+ +LH++ +IH+D+K SN
Sbjct: 107 E---LMDANLCQVIH-MELDHERMSYL-LYQMLCGI----KHLHSAG---IIHRDLKPSN 154
Query: 464 ILLSDDFEPQLSDFGLASWLSTSSSHLTCTDVAGTFGYLAPEYFMHGKVSEKIDVYAFGI 523
I++ D ++ DFGLA T+S++ T T Y APE + E +D+++ G
Sbjct: 155 IVVKSDCTLKILDFGLA---RTASTNFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGC 211
Query: 524 VLLELLSGKKPINSENPKGQESLVMWAKPILKDGKVS 560
++ EL+ G S +G + + W K I + G S
Sbjct: 212 IMGELVKG-----SVIFQGTDHIDQWNKVIEQLGTPS 243
>pdb|3D94|A Chain A, Crystal Structure Of The Insulin-Like Growth Factor-1
Receptor Kinase In Complex With Pqip
Length = 301
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 42/204 (20%), Positives = 98/204 (48%), Gaps = 17/204 (8%)
Query: 339 VGKGGHSHVY----RGCLPDGKE--LAVKILKPSEDVLK--EFASEIEIITALHHRNIIS 390
+G+G VY +G + D E +A+K + + + + EF +E ++ + +++
Sbjct: 20 LGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVR 79
Query: 391 LFGFCFEDNNLLLVYDFLSRGSLEENLHGNKKD--GNAF----GWTERYKVAVGVAEALD 444
L G + L++ + ++RG L+ L + + N ++ ++A +A+ +
Sbjct: 80 LLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIADGMA 139
Query: 445 YLHNSCEQPVIHKDVKSSNILLSDDFEPQLSDFGLASWLSTSSSHLTCTDVAGTFGYLAP 504
YL+ + +H+D+ + N +++DF ++ DFG+ + + + +++P
Sbjct: 140 YLNAN---KFVHRDLAARNCXVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMSP 196
Query: 505 EYFMHGKVSEKIDVYAFGIVLLEL 528
E G + DV++FG+VL E+
Sbjct: 197 ESLKDGVFTTYSDVWSFGVVLWEI 220
>pdb|4AZF|A Chain A, Human Dyrk2 In Complex With Leucettine L41
Length = 417
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 55/206 (26%), Positives = 95/206 (46%), Gaps = 26/206 (12%)
Query: 338 LVGKGGHSHVYRGCLPDGK---ELAVKILKPSEDVLKEFASEIEIITALHHR------NI 388
++GKG V + D K +A+K+++ + ++ A EI I+ L + N+
Sbjct: 104 VIGKGSFGQVVKAY--DHKVHQHVALKMVRNEKRFHRQAAEEIRILEHLRKQDKDNTMNV 161
Query: 389 ISLF-GFCFEDNNLLLVYDFLSRGSLEENLHGNKKDGNAFGWTERYKVAVGVAEALDYLH 447
I + F F N++ + ++ LS +L E + NK G + ++ A + + LD LH
Sbjct: 162 IHMLENFTFR-NHICMTFELLSM-NLYELIKKNKFQGFSLPLVRKF--AHSILQCLDALH 217
Query: 448 NSCEQPVIHKDVKSSNILLSDDFEPQLS--DFGLASWLSTSSSHLTCTDVAGTFGYLAPE 505
+ +IH D+K NILL + DFG S+ H + Y APE
Sbjct: 218 KN---RIIHCDLKPENILLKQQGRSGIKVIDFG-----SSCYEHQRVYTXIQSRFYRAPE 269
Query: 506 YFMHGKVSEKIDVYAFGIVLLELLSG 531
+ + ID+++ G +L ELL+G
Sbjct: 270 VILGARYGMPIDMWSLGCILAELLTG 295
>pdb|3K2L|A Chain A, Crystal Structure Of Dual-Specificity Tyrosine
Phosphorylation Regulated Kinase 2 (Dyrk2)
Length = 429
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 55/206 (26%), Positives = 95/206 (46%), Gaps = 26/206 (12%)
Query: 338 LVGKGGHSHVYRGCLPDGK---ELAVKILKPSEDVLKEFASEIEIITALHHR------NI 388
++GKG V + D K +A+K+++ + ++ A EI I+ L + N+
Sbjct: 104 VIGKGXFGQVVKAY--DHKVHQHVALKMVRNEKRFHRQAAEEIRILEHLRKQDKDNTMNV 161
Query: 389 ISLF-GFCFEDNNLLLVYDFLSRGSLEENLHGNKKDGNAFGWTERYKVAVGVAEALDYLH 447
I + F F N++ + ++ LS +L E + NK G + ++ A + + LD LH
Sbjct: 162 IHMLENFTFR-NHICMTFELLSM-NLYELIKKNKFQGFSLPLVRKF--AHSILQCLDALH 217
Query: 448 NSCEQPVIHKDVKSSNILLSDDFEPQLS--DFGLASWLSTSSSHLTCTDVAGTFGYLAPE 505
+ +IH D+K NILL + DFG S+ H + Y APE
Sbjct: 218 KN---RIIHCDLKPENILLKQQGRSGIKVIDFG-----SSCYEHQRVYXXIQSRFYRAPE 269
Query: 506 YFMHGKVSEKIDVYAFGIVLLELLSG 531
+ + ID+++ G +L ELL+G
Sbjct: 270 VILGARYGMPIDMWSLGCILAELLTG 295
>pdb|3AMA|A Chain A, Protein Kinase A Sixfold Mutant Model Of Aurora B With
Inhibitor Jnj- 7706621
pdb|3AMB|A Chain A, Protein Kinase A Sixfold Mutant Model Of Aurora B With
Inhibitor Vx- 680
Length = 351
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 52/191 (27%), Positives = 95/191 (49%), Gaps = 18/191 (9%)
Query: 355 GKELAVKILKPSEDV-LKEFA---SEIEIITALHHRNIISLFGFCFEDN-NLLLVYDFLS 409
G A+KIL + V LK+ +E I A++ ++ L F F+DN NL +V ++
Sbjct: 67 GNHYAMKILDKQKVVKLKQIEHTLNEKRIQQAVNFPFLVKL-EFSFKDNSNLYMVLEYAP 125
Query: 410 RGSLEENLHGNKKDGNAFGWTERYKVAVGVAEALDYLHNSCEQPVIHKDVKSSNILLSDD 469
G + +L ++ G R+ A + +YLH+ +I++D+K N+L+
Sbjct: 126 GGEMFSHL---RRIGRFSEPHARF-YAAQIVLTFEYLHSL---DLIYRDLKPENLLIDQQ 178
Query: 470 FEPQLSDFGLASWLSTSSSHLTCTDVAGTFGYLAPEYFMHGKVSEKIDVYAFGIVLLELL 529
+++DFG A + + L C GT YLAPE + ++ +D +A G+++ E+
Sbjct: 179 GYIKVADFGFAKRVKGRTWXL-C----GTPEYLAPEIILSKGYNKAVDWWALGVLIYEMA 233
Query: 530 SGKKPINSENP 540
+G P ++ P
Sbjct: 234 AGYPPFFADQP 244
>pdb|2IW8|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82h-L83v-
H84d Mutant With An O6-Cyclohexylmethylguanine Inhibitor
pdb|2IW8|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82h-L83v-
H84d Mutant With An O6-Cyclohexylmethylguanine Inhibitor
Length = 302
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 50/200 (25%), Positives = 96/200 (48%), Gaps = 15/200 (7%)
Query: 339 VGKGGHSHVY--RGCLPDGKELAVKILK---PSEDVLKEFASEIEIITALHHRNIISLFG 393
+G+G + VY R L G+ +A+K ++ +E V EI ++ L+H NI+ L
Sbjct: 14 IGEGTYGVVYKARNKL-TGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLD 72
Query: 394 FCFEDNNLLLVYDFLSRGSLEENLHGNKKDGNAFGWTERYKVAVGVAEALDYLHNSCEQP 453
+N L LV++ + + L++ + + G + Y + + L + H+
Sbjct: 73 VIHTENKLYLVFEHVDQ-DLKKFMDASALTGIPLPLIKSY--LFQLLQGLAFCHS---HR 126
Query: 454 VIHKDVKSSNILLSDDFEPQLSDFGLASWLSTSSSHLTCTDVAGTFGYLAPEYFMHGK-V 512
V+H+D+K N+L++ + +L+DFGLA T T Y APE + K
Sbjct: 127 VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVR--TYXHEVVTLWYRAPEILLGCKYY 184
Query: 513 SEKIDVYAFGIVLLELLSGK 532
S +D+++ G + E+++ +
Sbjct: 185 STAVDIWSLGCIFAEMVTRR 204
>pdb|2DYL|A Chain A, Crystal Structure Of Human Mitogen-Activated Protein
Kinase Kinase 7 Activated Mutant (S287d, T291d)
Length = 318
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 51/188 (27%), Positives = 90/188 (47%), Gaps = 17/188 (9%)
Query: 355 GKELAVKILKPS--EDVLKEFASEIEIITALHH-RNIISLFGFCFEDNNLLLVYDFLSRG 411
G +AVK ++ S ++ K +++++ H I+ FG + ++ + + + G
Sbjct: 50 GHVIAVKQMRRSGNKEENKRILMDLDVVLKSHDCPYIVQCFGTFITNTDVFIAMELM--G 107
Query: 412 SLEENLHGNKKDGNAFGWTERYKVAVGVAEALDYLHNSCEQPVIHKDVKSSNILLSDDFE 471
+ E L K+ K+ V + +AL YL + VIH+DVK SNILL + +
Sbjct: 108 TCAEKL--KKRMQGPIPERILGKMTVAIVKALYYLKE--KHGVIHRDVKPSNILLDERGQ 163
Query: 472 PQLSDFGLASWLSTSSSHLTCTDVAGTFGYLAPEYFMHGKVSE-----KIDVYAFGIVLL 526
+L DFG++ L + AG Y+APE ++ + DV++ GI L+
Sbjct: 164 IKLCDFGISGRLVDDKAK---DRSAGCAAYMAPERIDPPDPTKPDYDIRADVWSLGISLV 220
Query: 527 ELLSGKKP 534
EL +G+ P
Sbjct: 221 ELATGQFP 228
>pdb|2JDT|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
Isoquinoline-5- Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl) Amide
pdb|2JDV|A Chain A, Structure Of Pka-Pkb Chimera Complexed With A-443654
pdb|2UVX|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 7-Azaindole
pdb|2UW4|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
2-(4-(5-Methyl- 1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW7|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 4-(4-Chloro-
Phenyl)-4-(4-(1h-Pyrazol-4-Yl)-Phenyl)-Piperidine
pdb|4AXA|A Chain A, Structure Of Pka-pkb Chimera Complexed With
(1s)-2-amino-1-(
4-chlorophenyl)-1-(4-(1h-pyrazol-4-yl)phenyl)ethan-1-ol
Length = 351
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 51/191 (26%), Positives = 95/191 (49%), Gaps = 18/191 (9%)
Query: 355 GKELAVKILKPSEDV-LKEFA---SEIEIITALHHRNIISLFGFCFEDN-NLLLVYDFLS 409
G A+KIL + V LK+ +E I+ A++ + L F F+DN NL +V ++
Sbjct: 67 GNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLTKL-EFSFKDNSNLYMVMEYAP 125
Query: 410 RGSLEENLHGNKKDGNAFGWTERYKVAVGVAEALDYLHNSCEQPVIHKDVKSSNILLSDD 469
G + +L ++ G R+ A + +YLH+ +I++D+K N+++
Sbjct: 126 GGEMFSHL---RRIGRFSEPHARF-YAAQIVLTFEYLHSL---DLIYRDLKPENLMIDQQ 178
Query: 470 FEPQLSDFGLASWLSTSSSHLTCTDVAGTFGYLAPEYFMHGKVSEKIDVYAFGIVLLELL 529
+++DFG A + + L C GT YLAPE + ++ +D +A G+++ E+
Sbjct: 179 GYIKVTDFGFAKRVKGRTWXL-C----GTPEYLAPEIILSKGYNKAVDWWALGVLIYEMA 233
Query: 530 SGKKPINSENP 540
+G P ++ P
Sbjct: 234 AGYPPFFADQP 244
>pdb|2VO0|A Chain A, Structure Of Pka-Pkb Chimera Complexed With C-(4-(4-
Chlorophenyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Yl)methylamine
Length = 351
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 51/191 (26%), Positives = 95/191 (49%), Gaps = 18/191 (9%)
Query: 355 GKELAVKILKPSEDV-LKEFA---SEIEIITALHHRNIISLFGFCFEDN-NLLLVYDFLS 409
G A+KIL + V LK+ +E I+ A++ + L F F+DN NL +V ++
Sbjct: 67 GNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLTKL-EFSFKDNSNLYMVMEYAP 125
Query: 410 RGSLEENLHGNKKDGNAFGWTERYKVAVGVAEALDYLHNSCEQPVIHKDVKSSNILLSDD 469
G + +L ++ G R+ A + +YLH+ +I++D+K N+++
Sbjct: 126 GGEMFSHL---RRIGRFSEPHARF-YAAQIVLTFEYLHSL---DLIYRDLKPENLMIDQQ 178
Query: 470 FEPQLSDFGLASWLSTSSSHLTCTDVAGTFGYLAPEYFMHGKVSEKIDVYAFGIVLLELL 529
+++DFG A + + L C GT YLAPE + ++ +D +A G+++ E+
Sbjct: 179 GYIKVTDFGFAKRVKGRTWXL-C----GTPEYLAPEIILSKGYNKAVDWWALGVLIYEMA 233
Query: 530 SGKKPINSENP 540
+G P ++ P
Sbjct: 234 AGYPPFFADQP 244
>pdb|3UDB|A Chain A, Crystal Structure Of Snrk2.6
pdb|3UDB|B Chain B, Crystal Structure Of Snrk2.6
pdb|3UDB|C Chain C, Crystal Structure Of Snrk2.6
pdb|3UDB|D Chain D, Crystal Structure Of Snrk2.6
pdb|3UDB|E Chain E, Crystal Structure Of Snrk2.6
pdb|3UDB|F Chain F, Crystal Structure Of Snrk2.6
Length = 317
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 52/190 (27%), Positives = 83/190 (43%), Gaps = 18/190 (9%)
Query: 358 LAVKILKPSEDVLKEFASEIEIITALHHRNIISLFGFCFEDNNLLLVYDFLSRGSLEENL 417
+AVK ++ E + + EI +L H NI+ +L +V ++ S G L E +
Sbjct: 47 VAVKYIERGEKIDENVKREIINHRSLRHPNIVRFKEVILTPTHLAIVMEYASGGELFERI 106
Query: 418 --HGNKKDGNAFGWTERYKVAVGVAEALDYLHNSCEQPVIHKDVKSSNILLSDDFEPQL- 474
G + A + ++ V A A+ V H+D+K N LL P+L
Sbjct: 107 CNAGRFSEDEARFFFQQLISGVSYAHAMQ---------VAHRDLKLENTLLDGSPAPRLK 157
Query: 475 -SDFGLASWLSTSSSHLTCTDVAGTFGYLAPEYFMHGKVSEKI-DVYAFGIVLLELLSGK 532
+DFG + S H GT Y+APE + + K+ DV++ G+ L +L G
Sbjct: 158 IADFG---YSKASVLHSQPKSAVGTPAYIAPEVLLKKEYDGKVADVWSCGVTLYVMLVGA 214
Query: 533 KPI-NSENPK 541
P + E PK
Sbjct: 215 YPFEDPEEPK 224
>pdb|1CM8|A Chain A, Phosphorylated Map Kinase P38-Gamma
pdb|1CM8|B Chain B, Phosphorylated Map Kinase P38-Gamma
Length = 367
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 46/182 (25%), Positives = 85/182 (46%), Gaps = 12/182 (6%)
Query: 355 GKELAVKIL-KP--SEDVLKEFASEIEIITALHHRNIISLFGFCFEDNNLLLVYDFLSRG 411
G ++A+K L +P SE K E+ ++ + H N+I L D L DF
Sbjct: 50 GAKVAIKKLYRPFQSELFAKRAYRELRLLKHMRHENVIGLLDVFTPDETLDDFTDFYLVM 109
Query: 412 SLEENLHGNKKDGNAFGWTERYKVAVGVAEALDYLHNSCEQPVIHKDVKSSNILLSDDFE 471
G G + + + L Y+H + +IH+D+K N+ +++D E
Sbjct: 110 PFMGTDLGKLMKHEKLGEDRIQFLVYQMLKGLRYIHAAG---IIHRDLKPGNLAVNEDCE 166
Query: 472 PQLSDFGLASWLSTSSSHLTCTDVAGTFGYLAPEYFMHG-KVSEKIDVYAFGIVLLELLS 530
++ DFGLA + S + V T Y APE ++ + ++ +D+++ G ++ E+++
Sbjct: 167 LKILDFGLA---RQADSEMXGXVV--TRWYRAPEVILNWMRYTQTVDIWSVGCIMAEMIT 221
Query: 531 GK 532
GK
Sbjct: 222 GK 223
>pdb|3MN3|A Chain A, An Inhibited Conformation For The Protein Kinase Domain Of
The Saccharomyces Cerevisiae Ampk Homolog Snf1
Length = 271
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 44/191 (23%), Positives = 93/191 (48%), Gaps = 18/191 (9%)
Query: 355 GKELAVKILK----PSEDVLKEFASEIEIITALHHRNIISLFGFCFEDNNLLLVYDFLSR 410
G+++A+KI+ D+ EI + L H +II L+ + +++V ++
Sbjct: 29 GQKVALKIINKKVLAKSDMQGRIEREISYLRLLRHPHIIKLYDVIKSKDEIIMVIEYAGN 88
Query: 411 GSLEENLHGNKKDGNAFGWTERYKVAVGVAEALDYLHNSCEQPVIHKDVKSSNILLSDDF 470
+ + +K E + + A++Y H ++H+D+K N+LL +
Sbjct: 89 ELFDYIVQRDK-----MSEQEARRFFQQIISAVEYCH---RHKIVHRDLKPENLLLDEHL 140
Query: 471 EPQLSDFGLASWLSTSSSHLTCTDVAGTFGYLAPEYFMHGKV--SEKIDVYAFGIVLLEL 528
+++DFGL++ + T + L + G+ Y APE + GK+ ++DV++ G++L +
Sbjct: 141 NVKIADFGLSN-IMTDGNFLKTS--CGSPNYAAPE-VISGKLYAGPEVDVWSCGVILYVM 196
Query: 529 LSGKKPINSEN 539
L + P + E+
Sbjct: 197 LCRRLPFDDES 207
>pdb|2FH9|A Chain A, Structure And Dimerization Of The Kinase Domain From Yeast
Snf1
Length = 274
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 44/191 (23%), Positives = 93/191 (48%), Gaps = 18/191 (9%)
Query: 355 GKELAVKILK----PSEDVLKEFASEIEIITALHHRNIISLFGFCFEDNNLLLVYDFLSR 410
G+++A+KI+ D+ EI + L H +II L+ + +++V ++
Sbjct: 33 GQKVALKIINKKVLAKSDMQGRIEREISYLRLLRHPHIIKLYDVIKSKDEIIMVIEYAGN 92
Query: 411 GSLEENLHGNKKDGNAFGWTERYKVAVGVAEALDYLHNSCEQPVIHKDVKSSNILLSDDF 470
+ + +K E + + A++Y H ++H+D+K N+LL +
Sbjct: 93 ELFDYIVQRDK-----MSEQEARRFFQQIISAVEYCH---RHKIVHRDLKPENLLLDEHL 144
Query: 471 EPQLSDFGLASWLSTSSSHLTCTDVAGTFGYLAPEYFMHGKV--SEKIDVYAFGIVLLEL 528
+++DFGL++ + T + L + G+ Y APE + GK+ ++DV++ G++L +
Sbjct: 145 NVKIADFGLSN-IMTDGNFLKTS--CGSPNYAAPE-VISGKLYAGPEVDVWSCGVILYVM 200
Query: 529 LSGKKPINSEN 539
L + P + E+
Sbjct: 201 LCRRLPFDDES 211
>pdb|3HYH|A Chain A, Crystal Structure Of The Protein Kinase Domain Of Yeast
Amp-Activated Protein Kinase Snf1
pdb|3HYH|B Chain B, Crystal Structure Of The Protein Kinase Domain Of Yeast
Amp-Activated Protein Kinase Snf1
Length = 275
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 44/191 (23%), Positives = 93/191 (48%), Gaps = 18/191 (9%)
Query: 355 GKELAVKILK----PSEDVLKEFASEIEIITALHHRNIISLFGFCFEDNNLLLVYDFLSR 410
G+++A+KI+ D+ EI + L H +II L+ + +++V ++
Sbjct: 38 GQKVALKIINKKVLAKSDMQGRIEREISYLRLLRHPHIIKLYDVIKSKDEIIMVIEYAGN 97
Query: 411 GSLEENLHGNKKDGNAFGWTERYKVAVGVAEALDYLHNSCEQPVIHKDVKSSNILLSDDF 470
+ + +K E + + A++Y H ++H+D+K N+LL +
Sbjct: 98 ELFDYIVQRDK-----MSEQEARRFFQQIISAVEYCH---RHKIVHRDLKPENLLLDEHL 149
Query: 471 EPQLSDFGLASWLSTSSSHLTCTDVAGTFGYLAPEYFMHGKV--SEKIDVYAFGIVLLEL 528
+++DFGL++ + T + L + G+ Y APE + GK+ ++DV++ G++L +
Sbjct: 150 NVKIADFGLSN-IMTDGNFLKTS--CGSPNYAAPE-VISGKLYAGPEVDVWSCGVILYVM 205
Query: 529 LSGKKPINSEN 539
L + P + E+
Sbjct: 206 LCRRLPFDDES 216
>pdb|3DAE|A Chain A, Crystal Structure Of Phosphorylated Snf1 Kinase Domain
pdb|3DAE|B Chain B, Crystal Structure Of Phosphorylated Snf1 Kinase Domain
Length = 283
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 44/191 (23%), Positives = 93/191 (48%), Gaps = 18/191 (9%)
Query: 355 GKELAVKILK----PSEDVLKEFASEIEIITALHHRNIISLFGFCFEDNNLLLVYDFLSR 410
G+++A+KI+ D+ EI + L H +II L+ + +++V ++
Sbjct: 39 GQKVALKIINKKVLAKSDMQGRIEREISYLRLLRHPHIIKLYDVIKSKDEIIMVIEYAGN 98
Query: 411 GSLEENLHGNKKDGNAFGWTERYKVAVGVAEALDYLHNSCEQPVIHKDVKSSNILLSDDF 470
+ + +K E + + A++Y H ++H+D+K N+LL +
Sbjct: 99 ELFDYIVQRDK-----MSEQEARRFFQQIISAVEYCH---RHKIVHRDLKPENLLLDEHL 150
Query: 471 EPQLSDFGLASWLSTSSSHLTCTDVAGTFGYLAPEYFMHGKV--SEKIDVYAFGIVLLEL 528
+++DFGL++ + T + L + G+ Y APE + GK+ ++DV++ G++L +
Sbjct: 151 NVKIADFGLSN-IMTDGNFLKTS--CGSPNYAAPE-VISGKLYAGPEVDVWSCGVILYVM 206
Query: 529 LSGKKPINSEN 539
L + P + E+
Sbjct: 207 LCRRLPFDDES 217
>pdb|3VUM|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M7 In Map
Kinase Jnk1
Length = 370
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 42/165 (25%), Positives = 80/165 (48%), Gaps = 15/165 (9%)
Query: 371 KEFASEIEIITALHHRNIISLFGFCFEDNNLLLVYD-FLSRGSLEENLHG---NKKDGNA 426
K E+ ++ ++H+NII L +L D ++ ++ NL + D
Sbjct: 68 KRAYRELVLMKVVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLSQVIQMELDHER 127
Query: 427 FGWTERYKVAVGVAEALDYLHNSCEQPVIHKDVKSSNILLSDDFEPQLSDFGLASWLSTS 486
+ Y++ VG+ +LH++ +IH+D+K SNI++ D ++ DFGLA T+
Sbjct: 128 MSYL-LYQMLVGIK----HLHSAG---IIHRDLKPSNIVVKSDATLKILDFGLA---RTA 176
Query: 487 SSHLTCTDVAGTFGYLAPEYFMHGKVSEKIDVYAFGIVLLELLSG 531
+ T T Y APE + E +D+++ G+++ E++ G
Sbjct: 177 GTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGVIMGEMIKG 221
>pdb|2YA9|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
pdb|2YA9|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
pdb|2YAA|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Atp
pdb|2YAA|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Atp
pdb|2YAB|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Amp
pdb|2YAB|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Amp
Length = 361
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 48/192 (25%), Positives = 86/192 (44%), Gaps = 21/192 (10%)
Query: 355 GKELAVKILKPSED-------VLKEFASEIEIITALHHRNIISLFGFCFEDNNLLLVYDF 407
G E A K +K + +E E+ I+ + H NII+L +++L+ +
Sbjct: 37 GLEYAAKFIKKRQSRASRRGVCREEIEREVSILRQVLHPNIITLHDVYENRTDVVLILEL 96
Query: 408 LSRGSLEENLHGNKKDGNAFGWTERYKVAVGVAEALDYLHNSCEQPVIHKDVKSSNILLS 467
+S G L + L + E + + ++YLH + + H D+K NI+L
Sbjct: 97 VSGGELFDFL----AQKESLSEEEATSFIKQILDGVNYLHT---KKIAHFDLKPENIMLL 149
Query: 468 DDFEP----QLSDFGLASWLSTSSSHLTCTDVAGTFGYLAPEYFMHGKVSEKIDVYAFGI 523
D P +L DFGLA + + ++ GT ++APE + + + D+++ G+
Sbjct: 150 DKNIPIPHIKLIDFGLAHEIEDG---VEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGV 206
Query: 524 VLLELLSGKKPI 535
+ LLSG P
Sbjct: 207 ITYILLSGASPF 218
>pdb|3RGF|A Chain A, Crystal Structure Of Human Cdk8CYCC
Length = 405
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 60/226 (26%), Positives = 99/226 (43%), Gaps = 18/226 (7%)
Query: 339 VGKGGHSHVYRGCLPDGKELAVKILKPSEDVLKEFAS--EIEIITALHHRNIISL--FGF 394
VG+G + HVY+ DGK+ LK E ++ EI ++ L H N+ISL
Sbjct: 29 VGRGTYGHVYKAKRKDGKDDKDYALKQIEGTGISMSACREIALLRELKHPNVISLQKVFL 88
Query: 395 CFEDNNLLLVYDFLSRGSLE-ENLHGNKKDGNAFGWTERYKVAVGVAEALDYLHNSCEQP 453
D + L++D+ H K R V + + LD +H
Sbjct: 89 SHADRKVWLLFDYAEHDLWHIIKFHRASKANKKPVQLPRGMVKSLLYQILDGIHYLHANW 148
Query: 454 VIHKDVKSSNILL----SDDFEPQLSDFGLASWLSTSSSHLTCTD-VAGTFGYLAPEYFM 508
V+H+D+K +NIL+ + +++D G A ++ L D V TF Y APE +
Sbjct: 149 VLHRDLKPANILVMGEGPERGRVKIADMGFARLFNSPLKPLADLDPVVVTFWYRAPELLL 208
Query: 509 HGK-VSEKIDVYAFGIVLLELLSG-------KKPINSENPKGQESL 546
+ ++ ID++A G + ELL+ ++ I + NP + L
Sbjct: 209 GARHYTKAIDIWAIGCIFAELLTSEPIFHCRQEDIKTSNPYHHDQL 254
>pdb|3VUL|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M1 In Map
Kinase Jnk1
Length = 370
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 42/165 (25%), Positives = 80/165 (48%), Gaps = 15/165 (9%)
Query: 371 KEFASEIEIITALHHRNIISLFGFCFEDNNLLLVYD-FLSRGSLEENLHG---NKKDGNA 426
K E+ ++ ++H+NII L +L D ++ ++ NL + D
Sbjct: 68 KRAYRELVLMKVVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLSQVIQMELDHER 127
Query: 427 FGWTERYKVAVGVAEALDYLHNSCEQPVIHKDVKSSNILLSDDFEPQLSDFGLASWLSTS 486
+ Y++ VG+ +LH++ +IH+D+K SNI++ D ++ DFGLA T+
Sbjct: 128 MSYL-LYQMLVGIK----HLHSAG---IIHRDLKPSNIVVKSDATLKILDFGLA---RTA 176
Query: 487 SSHLTCTDVAGTFGYLAPEYFMHGKVSEKIDVYAFGIVLLELLSG 531
+ T T Y APE + E +D+++ G+++ E++ G
Sbjct: 177 GTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGVIMGEMIKG 221
>pdb|1NXK|A Chain A, Crystal Structure Of Staurosporine Bound To Map Kap Kinase
2
pdb|1NXK|B Chain B, Crystal Structure Of Staurosporine Bound To Map Kap Kinase
2
pdb|1NXK|C Chain C, Crystal Structure Of Staurosporine Bound To Map Kap Kinase
2
pdb|1NXK|D Chain D, Crystal Structure Of Staurosporine Bound To Map Kap Kinase
2
Length = 400
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 42/143 (29%), Positives = 67/143 (46%), Gaps = 13/143 (9%)
Query: 401 LLLVYDFLSRGSLEENLHGNKKDGNAFGWTERYKVAVGVAEALDYLHNSCEQPVIHKDVK 460
LL+V + L G L + + AF E ++ + EA+ YLH+ + H+DVK
Sbjct: 134 LLIVXECLDGGELFSRIQD--RGDQAFTEREASEIXKSIGEAIQYLHSIN---IAHRDVK 188
Query: 461 SSNILLSDDFEP----QLSDFGLASWLSTSSSHLTCTDVAGTFGYLAPEYFMHGKVSEKI 516
N+L + P +L+DFG A ++SH + T T Y+APE K +
Sbjct: 189 PENLLYTSK-RPNAILKLTDFGFAK---ETTSHNSLTTPCYTPYYVAPEVLGPEKYDKSC 244
Query: 517 DVYAFGIVLLELLSGKKPINSEN 539
D ++ G++ LL G P S +
Sbjct: 245 DXWSLGVIXYILLCGYPPFYSNH 267
>pdb|4F99|A Chain A, Human Cdc7 Kinase In Complex With Dbf4 And Nucleotide
pdb|4F9A|A Chain A, Human Cdc7 Kinase In Complex With Dbf4 And Nucleotide
pdb|4F9A|C Chain C, Human Cdc7 Kinase In Complex With Dbf4 And Nucleotide
pdb|4F9B|A Chain A, Human Cdc7 Kinase In Complex With Dbf4 And Pha767491
pdb|4F9B|C Chain C, Human Cdc7 Kinase In Complex With Dbf4 And Pha767491
pdb|4F9C|A Chain A, Human Cdc7 Kinase In Complex With Dbf4 And Xl413
Length = 361
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 59/246 (23%), Positives = 110/246 (44%), Gaps = 44/246 (17%)
Query: 323 YQELLSATSNFLPEYLVGKGGHSHVYRGC--LPDGKE--LAVKILKPSEDVLKEFASEIE 378
Y+ + ++ F E +G+G S VY L G E +A+K L P+ ++ A+E++
Sbjct: 13 YEAVPQLSNVFKIEDKIGEGTFSSVYLATAQLQVGPEEKIALKHLIPTSHPIR-IAAELQ 71
Query: 379 IITALHHRNIISLFGFCFEDNN-LLLVYDFLSRGSLEENLHGNKKDGNAFGWTERYKVAV 437
+T ++ + +CF N+ +++ +L S + L N+ + E + +
Sbjct: 72 CLTVAGGQDNVMGVKYCFRKNDHVVIAMPYLEHESFLDIL-------NSLSFQEVREYML 124
Query: 438 GVAEALDYLHNSCEQPVIHKDVKSSNILLSDDFEP-QLSDFGLAS-----------WLST 485
+ +AL +H + ++H+DVK SN L + + L DFGLA ++ +
Sbjct: 125 NLFKALKRIH---QFGIVHRDVKPSNFLYNRRLKKYALVDFGLAQGTHDTKIELLKFVQS 181
Query: 486 SSSHLTCTD---------------VAGTFGYLAPEYFMHG-KVSEKIDVYAFGIVLLELL 529
+ C+ AGT G+ APE + ID+++ G++ L LL
Sbjct: 182 EAQQERCSQNKCSICLSRRQQVAPRAGTPGFRAPEVLTKCPNQTTAIDMWSAGVIFLSLL 241
Query: 530 SGKKPI 535
SG+ P
Sbjct: 242 SGRYPF 247
>pdb|3DLS|A Chain A, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|B Chain B, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|C Chain C, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|D Chain D, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|E Chain E, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|F Chain F, Crystal Structure Of Human Pas Kinase Bound To Adp
Length = 335
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 55/218 (25%), Positives = 94/218 (43%), Gaps = 40/218 (18%)
Query: 339 VGKGGHSHVYRGCLPD-GKELAVKILKPSEDVLKE----------FASEIEIITALHHRN 387
+G G V+ + KE+ VK +K E VL++ EI I++ + H N
Sbjct: 32 LGSGAFGFVWTAVDKEKNKEVVVKFIK-KEKVLEDCWIEDPKLGKVTLEIAILSRVEHAN 90
Query: 388 IISLFGFCFEDNNLLLVYDFLSRGSLEENLHGNKKDGNAFGWTERYK---------VAVG 438
II + FE+ L HG+ D F + +R+ +
Sbjct: 91 IIKVLDI-FENQGFF---------QLVMEKHGSGLD--LFAFIDRHPRLDEPLASYIFRQ 138
Query: 439 VAEALDYLHNSCEQPVIHKDVKSSNILLSDDFEPQLSDFGLASWLSTSSSHLTCTDVAGT 498
+ A+ YL + +IH+D+K NI++++DF +L DFG A++L T GT
Sbjct: 139 LVSAVGYLRL---KDIIHRDIKDENIVIAEDFTIKLIDFGSAAYLERGKLFYT---FCGT 192
Query: 499 FGYLAPEYFMHGKV-SEKIDVYAFGIVLLELLSGKKPI 535
Y APE M ++++++ G+ L L+ + P
Sbjct: 193 IEYCAPEVLMGNPYRGPELEMWSLGVTLYTLVFEENPF 230
>pdb|3UC4|A Chain A, The Crystal Structure Of Snf1-Related Kinase 2.6
pdb|3UC4|B Chain B, The Crystal Structure Of Snf1-Related Kinase 2.6
Length = 362
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 51/188 (27%), Positives = 79/188 (42%), Gaps = 14/188 (7%)
Query: 358 LAVKILKPSEDVLKEFASEIEIITALHHRNIISLFGFCFEDNNLLLVYDFLSRGSLEENL 417
+AVK ++ E + EI +L H NI+ +L +V ++ S G L E +
Sbjct: 47 VAVKYIERGEKIAANVKREIINHRSLRHPNIVRFKEVILTPTHLAIVMEYASGGELFERI 106
Query: 418 HGNKKDGNAFGWTERYKVAVGVAEALDYLHNSCEQPVIHKDVKSSNILLSDDFEPQLS-- 475
+ F E + + Y H V H+D+K N LL P+L
Sbjct: 107 ----CNAGRFSEDEARFFFQQLISGVSYCH---AMQVCHRDLKLENTLLDGSPAPRLKIC 159
Query: 476 DFGLASWLSTSSSHLTCTDVAGTFGYLAPEYFMHGKVSEKI-DVYAFGIVLLELLSGKKP 534
DFG + +S H GT Y+APE + + K+ DV++ G+ L +L G P
Sbjct: 160 DFG---YSKSSVLHSQPKSTVGTPAYIAPEVLLKKEYDGKVADVWSCGVTLYVMLVGAYP 216
Query: 535 I-NSENPK 541
+ E PK
Sbjct: 217 FEDPEEPK 224
>pdb|3ALN|A Chain A, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALN|B Chain B, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALN|C Chain C, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALO|A Chain A, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Ternary Complex With Amp-Pnp And P38 Peptide
pdb|3VUT|A Chain A, Crystal Structures Of Non-Phosphorylated Map2k4
pdb|3VUT|B Chain B, Crystal Structures Of Non-Phosphorylated Map2k4
Length = 327
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 49/209 (23%), Positives = 96/209 (45%), Gaps = 13/209 (6%)
Query: 339 VGKGGHSHVYRGC-LPDGKELAVKILKPSEDVLKEFASEIEIITALHHRN---IISLFGF 394
+G+G + V + P G+ +AVK ++ + D ++ +++ + + I+ +G
Sbjct: 30 IGRGAYGSVNKMVHKPSGQIMAVKRIRSTVDEKEQKQLLMDLDVVMRSSDCPYIVQFYGA 89
Query: 395 CFEDNNLLLVYDFLSRGSLEENLHGNKKDGNAFGWTERYKVAVGVAEALDYLHNSCEQPV 454
F + + + + +S + + + K+ + +AL++L + + +
Sbjct: 90 LFREGDCWICMELMSTSFDKFYKYVYSVLDDVIPEEILGKITLATVKALNHLKENLK--I 147
Query: 455 IHKDVKSSNILLSDDFEPQLSDFGLASWLSTSSSHLTCTDVAGTFGYLAPEYFMHGKVSE 514
IH+D+K SNILL +L DFG++ L S + T AG Y+APE +
Sbjct: 148 IHRDIKPSNILLDRSGNIKLCDFGISGQLVDS---IAKTRDAGCRPYMAPERIDPSASRQ 204
Query: 515 ----KIDVYAFGIVLLELLSGKKPINSEN 539
+ DV++ GI L EL +G+ P N
Sbjct: 205 GYDVRSDVWSLGITLYELATGRFPYPKWN 233
>pdb|3SA0|A Chain A, Complex Of Erk2 With Norathyriol
pdb|4FUY|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek2
pdb|4FV0|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek3
Length = 360
Score = 53.5 bits (127), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 31/96 (32%), Positives = 54/96 (56%), Gaps = 5/96 (5%)
Query: 439 VAEALDYLHNSCEQPVIHKDVKSSNILLSDDFEPQLSDFGLASWLSTSSSHL-TCTDVAG 497
+ L Y+H++ V+H+D+K SN+LL+ + ++ DFGLA H T+
Sbjct: 133 ILRGLKYIHSAN---VLHRDLKPSNLLLNTTXDLKIXDFGLARVADPDHDHTGFLTEYVA 189
Query: 498 TFGYLAPEYFMHGK-VSEKIDVYAFGIVLLELLSGK 532
T Y APE ++ K ++ ID+++ G +L E+LS +
Sbjct: 190 TRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 225
>pdb|3TEI|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4H3P|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4H3P|D Chain D, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 53.5 bits (127), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 49/183 (26%), Positives = 87/183 (47%), Gaps = 14/183 (7%)
Query: 357 ELAVKILKPSED--VLKEFASEIEIITALHHRNIISLFGFCFEDNNLLLVYDFLSRGSLE 414
+A+K + P E + EI+I+ A H NII + + ++ + +E
Sbjct: 52 RVAIKKISPFEHQTYCQRTLREIKILLAFRHENIIGINDIIRAPTIEQMKDVYIVQDLME 111
Query: 415 ENLHGNKKD---GNAFGWTERYKVAVGVAEALDYLHNSCEQPVIHKDVKSSNILLSDDFE 471
+L+ K N Y++ G L Y+H++ V+H+D+K SN+LL+ +
Sbjct: 112 TDLYKLLKTQHLSNDHICYFLYQILRG----LKYIHSAN---VLHRDLKPSNLLLNTTCD 164
Query: 472 PQLSDFGLASWLSTSSSHL-TCTDVAGTFGYLAPEYFMHGK-VSEKIDVYAFGIVLLELL 529
++ DFGLA H T+ T Y APE ++ K ++ ID+++ G +L E+L
Sbjct: 165 LKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEML 224
Query: 530 SGK 532
S +
Sbjct: 225 SNR 227
>pdb|4FUX|A Chain A, Crystal Structure Of The Erk2 Complexed With E75
pdb|4FV1|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek4
pdb|4FV2|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek5
pdb|4FV3|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek6
pdb|4FV4|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek7
pdb|4FV5|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek9
pdb|4FV8|A Chain A, Crystal Structure Of The Erk2 Complexed With E63
pdb|4FV9|A Chain A, Crystal Structure Of The Erk2 Complexed With E71
pdb|4G6N|A Chain A, Crystal Structure Of The Erk2
Length = 360
Score = 53.5 bits (127), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 31/96 (32%), Positives = 54/96 (56%), Gaps = 5/96 (5%)
Query: 439 VAEALDYLHNSCEQPVIHKDVKSSNILLSDDFEPQLSDFGLASWLSTSSSHL-TCTDVAG 497
+ L Y+H++ V+H+D+K SN+LL+ + ++ DFGLA H T+
Sbjct: 133 ILRGLKYIHSAN---VLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLTEYVA 189
Query: 498 TFGYLAPEYFMHGK-VSEKIDVYAFGIVLLELLSGK 532
T Y APE ++ K ++ ID+++ G +L E+LS +
Sbjct: 190 TRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 225
>pdb|4FV7|A Chain A, Crystal Structure Of The Erk2 Complexed With E94
pdb|4G6O|A Chain A, Crystal Structure Of The Erk2
Length = 360
Score = 53.5 bits (127), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 31/96 (32%), Positives = 54/96 (56%), Gaps = 5/96 (5%)
Query: 439 VAEALDYLHNSCEQPVIHKDVKSSNILLSDDFEPQLSDFGLASWLSTSSSHL-TCTDVAG 497
+ L Y+H++ V+H+D+K SN+LL+ + ++ DFGLA H T+
Sbjct: 133 ILRGLKYIHSAN---VLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLTEYVA 189
Query: 498 TFGYLAPEYFMHGK-VSEKIDVYAFGIVLLELLSGK 532
T Y APE ++ K ++ ID+++ G +L E+LS +
Sbjct: 190 TRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 225
>pdb|1H4L|A Chain A, Structure And Regulation Of The Cdk5-P25(Nck5a) Complex
pdb|1H4L|B Chain B, Structure And Regulation Of The Cdk5-P25(Nck5a) Complex
Length = 292
Score = 53.5 bits (127), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 51/207 (24%), Positives = 93/207 (44%), Gaps = 16/207 (7%)
Query: 339 VGKGGHSHVYRGCLPDGKELA----VKILKPSEDVLKEFASEIEIITALHHRNIISLFGF 394
+G+G + V++ + E+ V++ E V EI ++ L H+NI+ L
Sbjct: 10 IGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNIVRLHDV 69
Query: 395 CFEDNNLLLVYDFLSRGSLEENLHGNKKDGNAFGWTERYK-VAVGVAEALDYLHNSCEQP 453
D L LV++F +++L N E K + + L + H+ +
Sbjct: 70 LHSDKKLTLVFEFC-----DQDLKKYFDSCNGDLDPEIVKSFLFQLLKGLGFCHS---RN 121
Query: 454 VIHKDVKSSNILLSDDFEPQLSDFGLASWLSTSSSHLTCTDVAGTFGYLAPEYFMHGKV- 512
V+H+D+K N+L++ + E +L+DFGLA + V T Y P+ K+
Sbjct: 122 VLHRDLKPQNLLINRNGELKLADFGLARAFGIPVRCYSAEVV--TLWYRPPDVLFGAKLY 179
Query: 513 SEKIDVYAFGIVLLELLSGKKPINSEN 539
S ID+++ G + EL + +P+ N
Sbjct: 180 STSIDMWSAGCIFAELANAARPLFPGN 206
>pdb|4GSB|A Chain A, Monoclinic Crystal Form Of The Apo-Erk2
Length = 364
Score = 53.5 bits (127), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 31/96 (32%), Positives = 54/96 (56%), Gaps = 5/96 (5%)
Query: 439 VAEALDYLHNSCEQPVIHKDVKSSNILLSDDFEPQLSDFGLASWLSTSSSHL-TCTDVAG 497
+ L Y+H++ V+H+D+K SN+LL+ + ++ DFGLA H T+
Sbjct: 137 ILRGLKYIHSAN---VLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLTEYVA 193
Query: 498 TFGYLAPEYFMHGK-VSEKIDVYAFGIVLLELLSGK 532
T Y APE ++ K ++ ID+++ G +L E+LS +
Sbjct: 194 TRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 229
>pdb|3QYW|A Chain A, Crystal Structure Of Erk2 In Complex With An Inhibitor
pdb|3QYZ|A Chain A, Crystal Structure Of Erk2 In Complex With An Inhibitor
pdb|4GT3|A Chain A, Atp-Bound Form Of The Erk2 Kinase
pdb|4GVA|A Chain A, Adp-Bound Form Of The Erk2 Kinase
Length = 364
Score = 53.5 bits (127), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 31/96 (32%), Positives = 54/96 (56%), Gaps = 5/96 (5%)
Query: 439 VAEALDYLHNSCEQPVIHKDVKSSNILLSDDFEPQLSDFGLASWLSTSSSHL-TCTDVAG 497
+ L Y+H++ V+H+D+K SN+LL+ + ++ DFGLA H T+
Sbjct: 137 ILRGLKYIHSAN---VLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLTEYVA 193
Query: 498 TFGYLAPEYFMHGK-VSEKIDVYAFGIVLLELLSGK 532
T Y APE ++ K ++ ID+++ G +L E+LS +
Sbjct: 194 TRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 229
>pdb|2FSL|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a+f327s)
Activating Mutant Form-A
pdb|2FSM|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a+f327s)
Activating Mutant Form-B
Length = 367
Score = 53.1 bits (126), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 53/205 (25%), Positives = 98/205 (47%), Gaps = 25/205 (12%)
Query: 339 VGKGGHSHVYRGC-LPDGKELAVKIL-KPSEDVL--KEFASEIEIITALHHRNIISLFGF 394
VG G + V G +AVK L +P + ++ K E+ ++ + H N+I L
Sbjct: 37 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 96
Query: 395 CF------EDNNLLLVYDFLSRGSLEENLHGNKKDGNAFGWTERYKVAVGVAEALDYLHN 448
E N++ LV + G+ N+ +K + Y++ G L Y+H+
Sbjct: 97 FTPARSLEEFNDVYLVTHLM--GADLNNIVKCQKLTDDHVQFLIYQILRG----LKYIHS 150
Query: 449 SCEQPVIHKDVKSSNILLSDDFEPQLSDFGLASWLSTSSSHLTCTDVAGTFGYLAPEYFM 508
+ +IH+D+K SN+ +++D E ++ DFGLA + T T Y APE +
Sbjct: 151 A---DIIHRDLKPSNLAVNEDCELKILDFGLARHTADE-----MTGYVATRWYRAPEIML 202
Query: 509 HG-KVSEKIDVYAFGIVLLELLSGK 532
+ ++ +D+++ G ++ ELL+G+
Sbjct: 203 NWMHYNQTVDIWSVGCIMAELLTGR 227
>pdb|3OHT|A Chain A, Crystal Structure Of Salmo Salar P38alpha
pdb|3OHT|B Chain B, Crystal Structure Of Salmo Salar P38alpha
Length = 389
Score = 53.1 bits (126), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 55/207 (26%), Positives = 100/207 (48%), Gaps = 29/207 (14%)
Query: 339 VGKGGHSHVYRGC-LPDGKELAVKIL-KPSEDVL--KEFASEIEIITALHHRNIISLFGF 394
VG G + V + G ++AVK L +P + ++ K E+ ++ + H N+I L
Sbjct: 59 VGSGAYGSVCSSYDVKSGLKIAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 118
Query: 395 CF------EDNNLLLVYDFLSRGSLEENLHGNKKDGNAFGWTERYKVAVGVAEALDYLHN 448
E N++ LV + G+ N+ +K + Y++ G L Y+H+
Sbjct: 119 FTPATSLEEFNDVYLVTHLM--GADLNNIVKCQKLTDDHVQFLIYQILRG----LKYIHS 172
Query: 449 SCEQPVIHKDVKSSNILLSDDFEPQLSDFGLASWLSTSSSHLTCTDVAGTFGYLAPEY-- 506
+ +IH+D+K SN+ +++D E ++ DFGLA T T Y APE
Sbjct: 173 A---DIIHRDLKPSNLAVNEDCELKILDFGLARHTDDE-----MTGYVATRWYRAPEIML 224
Query: 507 -FMHGKVSEKIDVYAFGIVLLELLSGK 532
+MH ++ +D+++ G ++ ELL+G+
Sbjct: 225 NWMHYNMT--VDIWSVGCIMAELLTGR 249
>pdb|1Z9X|A Chain A, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
pdb|1Z9X|B Chain B, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
pdb|1Z9X|C Chain C, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
Length = 321
Score = 53.1 bits (126), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 42/169 (24%), Positives = 79/169 (46%), Gaps = 14/169 (8%)
Query: 371 KEFASEIEIITALHHRNIISLFGFCFEDNNLLLVYDFLSRGSLEENLHGNKKDGNAFGWT 430
+E E+ I+ + H N+I+L +++L+ + +S G L + L +
Sbjct: 60 EEIEREVSILRQVLHHNVITLHDVYENRTDVVLILELVSGGELFDFL----AQKESLSEE 115
Query: 431 ERYKVAVGVAEALDYLHNSCEQPVIHKDVKSSNILLSDDFEP----QLSDFGLASWLSTS 486
E + + ++YLH + + H D+K NI+L D P +L DFGLA +
Sbjct: 116 EATSFIKQILDGVNYLHT---KKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDG 172
Query: 487 SSHLTCTDVAGTFGYLAPEYFMHGKVSEKIDVYAFGIVLLELLSGKKPI 535
+ ++ GT ++APE + + + D+++ G++ LLSG P
Sbjct: 173 ---VEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPF 218
>pdb|4E5A|X Chain X, The W197a Mutant Of P38a Map Kinase
Length = 360
Score = 53.1 bits (126), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 53/205 (25%), Positives = 97/205 (47%), Gaps = 25/205 (12%)
Query: 339 VGKGGHSHVYRGC-LPDGKELAVKIL-KPSEDVL--KEFASEIEIITALHHRNIISLFGF 394
VG G + V G +AVK L +P + ++ K E+ ++ + H N+I L
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 89
Query: 395 CF------EDNNLLLVYDFLSRGSLEENLHGNKKDGNAFGWTERYKVAVGVAEALDYLHN 448
E N++ LV + G+ N+ +K + Y++ G L Y+H+
Sbjct: 90 FTPARSLEEFNDVYLVTHLM--GADLNNIVKCQKLTDDHVQFLIYQILRG----LKYIHS 143
Query: 449 SCEQPVIHKDVKSSNILLSDDFEPQLSDFGLASWLSTSSSHLTCTDVAGTFGYLAPEYFM 508
+ +IH+D+K SN+ +++D E ++ DFGLA T T Y APE +
Sbjct: 144 A---DIIHRDLKPSNLAVNEDCELKILDFGLARHTDDE-----MTGYVATRWYRAPEIML 195
Query: 509 HG-KVSEKIDVYAFGIVLLELLSGK 532
+ ++ +D+++ G ++ ELL+G+
Sbjct: 196 NAMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|1PME|A Chain A, Structure Of Penta Mutant Human Erk2 Map Kinase Complexed
With A Specific Inhibitor Of Human P38 Map Kinase
Length = 380
Score = 53.1 bits (126), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 31/96 (32%), Positives = 54/96 (56%), Gaps = 5/96 (5%)
Query: 439 VAEALDYLHNSCEQPVIHKDVKSSNILLSDDFEPQLSDFGLASWLSTSSSHL-TCTDVAG 497
+ L Y+H++ V+H+D+K SN+LL+ + ++ DFGLA H T+
Sbjct: 153 ILRGLKYIHSAN---VLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLTEYVA 209
Query: 498 TFGYLAPEYFMHGK-VSEKIDVYAFGIVLLELLSGK 532
T Y APE ++ K ++ ID+++ G +L E+LS +
Sbjct: 210 TRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 245
>pdb|3D83|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biphenyl
Amide Inhibitor
pdb|3IPH|A Chain A, Crystal Structure Of P38 In Complex With A Biphenylamide
Inhibitor
Length = 360
Score = 53.1 bits (126), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 53/205 (25%), Positives = 97/205 (47%), Gaps = 25/205 (12%)
Query: 339 VGKGGHSHVYRGC-LPDGKELAVKIL-KPSEDVL--KEFASEIEIITALHHRNIISLFGF 394
VG G + V G +AVK L +P + ++ K E+ ++ + H N+I L
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 89
Query: 395 CF------EDNNLLLVYDFLSRGSLEENLHGNKKDGNAFGWTERYKVAVGVAEALDYLHN 448
E N++ LV + G+ N+ +K + Y++ G L Y+H+
Sbjct: 90 FTPARSLEEFNDVYLVTHLM--GADLNNIVKXQKLTDDHVQFLIYQILRG----LKYIHS 143
Query: 449 SCEQPVIHKDVKSSNILLSDDFEPQLSDFGLASWLSTSSSHLTCTDVAGTFGYLAPEYFM 508
+ +IH+D+K SN+ +++D E ++ DFGLA T T Y APE +
Sbjct: 144 A---DIIHRDLKPSNLAVNEDXELKILDFGLARHTDDE-----MTGYVATRWYRAPEIML 195
Query: 509 HG-KVSEKIDVYAFGIVLLELLSGK 532
+ ++ +D+++ G ++ ELL+G+
Sbjct: 196 NWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|1ZWS|A Chain A, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|B Chain B, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|C Chain C, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|D Chain D, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|E Chain E, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|F Chain F, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|G Chain G, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|H Chain H, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
Length = 288
Score = 53.1 bits (126), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 42/169 (24%), Positives = 79/169 (46%), Gaps = 14/169 (8%)
Query: 371 KEFASEIEIITALHHRNIISLFGFCFEDNNLLLVYDFLSRGSLEENLHGNKKDGNAFGWT 430
+E E+ I+ + H N+I+L +++L+ + +S G L + L +
Sbjct: 60 EEIEREVSILRQVLHHNVITLHDVYENRTDVVLILELVSGGELFDFL----AQKESLSEE 115
Query: 431 ERYKVAVGVAEALDYLHNSCEQPVIHKDVKSSNILLSDDFEP----QLSDFGLASWLSTS 486
E + + ++YLH + + H D+K NI+L D P +L DFGLA +
Sbjct: 116 EATSFIKQILDGVNYLHT---KKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDG 172
Query: 487 SSHLTCTDVAGTFGYLAPEYFMHGKVSEKIDVYAFGIVLLELLSGKKPI 535
+ ++ GT ++APE + + + D+++ G++ LLSG P
Sbjct: 173 ---VEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPF 218
>pdb|2FST|X Chain X, Mitogen Activated Protein Kinase P38alpha (d176a+f327l)
Activating Mutant
Length = 367
Score = 53.1 bits (126), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 53/205 (25%), Positives = 98/205 (47%), Gaps = 25/205 (12%)
Query: 339 VGKGGHSHVYRGC-LPDGKELAVKIL-KPSEDVL--KEFASEIEIITALHHRNIISLFGF 394
VG G + V G +AVK L +P + ++ K E+ ++ + H N+I L
Sbjct: 37 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 96
Query: 395 CF------EDNNLLLVYDFLSRGSLEENLHGNKKDGNAFGWTERYKVAVGVAEALDYLHN 448
E N++ LV + G+ N+ +K + Y++ G L Y+H+
Sbjct: 97 FTPARSLEEFNDVYLVTHLM--GADLNNIVKCQKLTDDHVQFLIYQILRG----LKYIHS 150
Query: 449 SCEQPVIHKDVKSSNILLSDDFEPQLSDFGLASWLSTSSSHLTCTDVAGTFGYLAPEYFM 508
+ +IH+D+K SN+ +++D E ++ DFGLA + T T Y APE +
Sbjct: 151 A---DIIHRDLKPSNLAVNEDCELKILDFGLARHTADE-----MTGYVATRWYRAPEIML 202
Query: 509 HG-KVSEKIDVYAFGIVLLELLSGK 532
+ ++ +D+++ G ++ ELL+G+
Sbjct: 203 NWMHYNQTVDIWSVGCIMAELLTGR 227
>pdb|2A27|A Chain A, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|B Chain B, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|C Chain C, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|D Chain D, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|E Chain E, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|F Chain F, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|G Chain G, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|H Chain H, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
Length = 321
Score = 53.1 bits (126), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 42/169 (24%), Positives = 79/169 (46%), Gaps = 14/169 (8%)
Query: 371 KEFASEIEIITALHHRNIISLFGFCFEDNNLLLVYDFLSRGSLEENLHGNKKDGNAFGWT 430
+E E+ I+ + H N+I+L +++L+ + +S G L + L +
Sbjct: 60 EEIEREVSILRQVLHHNVITLHDVYENRTDVVLILELVSGGELFDFL----AQKESLSEE 115
Query: 431 ERYKVAVGVAEALDYLHNSCEQPVIHKDVKSSNILLSDDFEP----QLSDFGLASWLSTS 486
E + + ++YLH + + H D+K NI+L D P +L DFGLA +
Sbjct: 116 EATSFIKQILDGVNYLHT---KKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDG 172
Query: 487 SSHLTCTDVAGTFGYLAPEYFMHGKVSEKIDVYAFGIVLLELLSGKKPI 535
+ ++ GT ++APE + + + D+++ G++ LLSG P
Sbjct: 173 ---VEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPF 218
>pdb|3HMN|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With Atp
pdb|3HMO|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With The Inhibitor Staurosporine
pdb|3HMP|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With A Quinazolin Ligand Compound 4
Length = 342
Score = 53.1 bits (126), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 53/214 (24%), Positives = 95/214 (44%), Gaps = 27/214 (12%)
Query: 339 VGKGGHSHVYRGCLPDGKEL-AVKILKPSE---DVLKEFASEIEIITAL--HHRNIISLF 392
+G GG S V++ L + K++ A+K + E L + +EI + L H II L+
Sbjct: 64 IGSGGSSKVFQ-VLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLY 122
Query: 393 GFCFEDNNLLLVYDFLSRGSLEENLHGNKKDGNAFGWTERYKVAVGVAEALDYLHNSCEQ 452
+ D + +V + G+++ N KK + ER + EA+ +H +
Sbjct: 123 DYEITDQYIYMV---MECGNIDLNSWLKKK--KSIDPWERKSYWKNMLEAVHTIH---QH 174
Query: 453 PVIHKDVKSSNILLSDDFEPQLSDFGLASWLSTSSSHLTCTDVAGTFGYLAPEYFMHGKV 512
++H D+K +N L+ D +L DFG+A+ + ++ + GT Y+ PE
Sbjct: 175 GIVHSDLKPANFLIVDGML-KLIDFGIANQMQPDTTSVVKDSQVGTVNYMPPEAIKDMSS 233
Query: 513 SEK-----------IDVYAFGIVLLELLSGKKPI 535
S + DV++ G +L + GK P
Sbjct: 234 SRENGKSKSKISPKSDVWSLGCILYYMTYGKTPF 267
>pdb|4EC8|A Chain A, Structure Of Full Length Cdk9 In Complex With Cyclint And
Drb
pdb|4EC9|A Chain A, Crystal Structure Of Full-Length Cdk9 In Complex With
Cyclin T
Length = 373
Score = 53.1 bits (126), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 46/176 (26%), Positives = 84/176 (47%), Gaps = 21/176 (11%)
Query: 376 EIEIITALHHRNIISLFGFCFED--------NNLLLVYDFLSRGSLEENLHGNKKDGNA- 426
EI+I+ L H N+++L C ++ LV+DF E +L G +
Sbjct: 67 EIKILQLLKHENVVNLIEICRTKASPYNRCKGSIYLVFDFC-----EHDLAGLLSNVLVK 121
Query: 427 FGWTERYKVAVGVAEALDYLHNSCEQPVIHKDVKSSNILLSDDFEPQLSDFGLASW--LS 484
F +E +V + L Y+H + ++H+D+K++N+L++ D +L+DFGLA L+
Sbjct: 122 FTLSEIKRVMQMLLNGLYYIHRN---KILHRDMKAANVLITRDGVLKLADFGLARAFSLA 178
Query: 485 TSSSHLTCTDVAGTFGYLAPEYFMHGK-VSEKIDVYAFGIVLLELLSGKKPINSEN 539
+S + T Y PE + + ID++ G ++ E+ + + PI N
Sbjct: 179 KNSQPNRYXNRVVTLWYRPPELLLGERDYGPPIDLWGAGCIMAEMWT-RSPIMQGN 233
>pdb|3UJG|A Chain A, Crystal Structure Of Snrk2.6 In Complex With Hab1
Length = 361
Score = 53.1 bits (126), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 51/188 (27%), Positives = 80/188 (42%), Gaps = 14/188 (7%)
Query: 358 LAVKILKPSEDVLKEFASEIEIITALHHRNIISLFGFCFEDNNLLLVYDFLSRGSLEENL 417
+AVK ++ E + + EI +L H NI+ +L +V ++ S G L E +
Sbjct: 46 VAVKYIERGEKIDENVKREIINHRSLRHPNIVRFKEVILTPTHLAIVMEYASGGELFERI 105
Query: 418 HGNKKDGNAFGWTERYKVAVGVAEALDYLHNSCEQPVIHKDVKSSNILLSDDFEPQLS-- 475
+ F E + + Y H V H+D+K N LL P+L
Sbjct: 106 ----CNAGRFSEDEARFFFQQLISGVSYCH---AMQVCHRDLKLENTLLDGSPAPRLKIC 158
Query: 476 DFGLASWLSTSSSHLTCTDVAGTFGYLAPEYFMHGKVSEKI-DVYAFGIVLLELLSGKKP 534
DFG + +S H GT Y+APE + + K+ DV++ G+ L +L G P
Sbjct: 159 DFG---YSKSSVLHSQPKSTVGTPAYIAPEVLLKKEYDGKVADVWSCGVTLYVMLVGAYP 215
Query: 535 I-NSENPK 541
+ E PK
Sbjct: 216 FEDPEEPK 223
>pdb|1WMK|A Chain A, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|E Chain E, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|C Chain C, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|B Chain B, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|F Chain F, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|D Chain D, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|H Chain H, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|G Chain G, Human Death-Associated Kinase Drp-1, Mutant S308d D40
Length = 321
Score = 53.1 bits (126), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 42/169 (24%), Positives = 79/169 (46%), Gaps = 14/169 (8%)
Query: 371 KEFASEIEIITALHHRNIISLFGFCFEDNNLLLVYDFLSRGSLEENLHGNKKDGNAFGWT 430
+E E+ I+ + H N+I+L +++L+ + +S G L + L +
Sbjct: 60 EEIEREVSILRQVLHHNVITLHDVYENRTDVVLILELVSGGELFDFL----AQKESLSEE 115
Query: 431 ERYKVAVGVAEALDYLHNSCEQPVIHKDVKSSNILLSDDFEP----QLSDFGLASWLSTS 486
E + + ++YLH + + H D+K NI+L D P +L DFGLA +
Sbjct: 116 EATSFIKQILDGVNYLHT---KKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDG 172
Query: 487 SSHLTCTDVAGTFGYLAPEYFMHGKVSEKIDVYAFGIVLLELLSGKKPI 535
+ ++ GT ++APE + + + D+++ G++ LLSG P
Sbjct: 173 ---VEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPF 218
>pdb|4FV6|A Chain A, Crystal Structure Of The Erk2 Complexed With E57
Length = 360
Score = 53.1 bits (126), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 31/96 (32%), Positives = 54/96 (56%), Gaps = 5/96 (5%)
Query: 439 VAEALDYLHNSCEQPVIHKDVKSSNILLSDDFEPQLSDFGLASWLSTSSSHL-TCTDVAG 497
+ L Y+H++ V+H+D+K SN+LL+ + ++ DFGLA H T+
Sbjct: 133 ILRGLKYIHSAN---VLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVA 189
Query: 498 TFGYLAPEYFMHGK-VSEKIDVYAFGIVLLELLSGK 532
T Y APE ++ K ++ ID+++ G +L E+LS +
Sbjct: 190 TRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 225
>pdb|3R63|A Chain A, Structure Of Erk2 (Spe) Mutant (S246e)
Length = 358
Score = 53.1 bits (126), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 31/96 (32%), Positives = 54/96 (56%), Gaps = 5/96 (5%)
Query: 439 VAEALDYLHNSCEQPVIHKDVKSSNILLSDDFEPQLSDFGLASWLSTSSSHL-TCTDVAG 497
+ L Y+H++ V+H+D+K SN+LL+ + ++ DFGLA H T+
Sbjct: 131 ILRGLKYIHSAN---VLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVA 187
Query: 498 TFGYLAPEYFMHGK-VSEKIDVYAFGIVLLELLSGK 532
T Y APE ++ K ++ ID+++ G +L E+LS +
Sbjct: 188 TRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 223
>pdb|3FI4|A Chain A, P38 Kinase Crystal Structure In Complex With Ro4499
pdb|3FKO|A Chain A, P38 Kinase Crystal Structure In Complex With Ro3668
pdb|3FLN|C Chain C, P38 Kinase Crystal Structure In Complex With R1487
Length = 372
Score = 53.1 bits (126), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 54/205 (26%), Positives = 97/205 (47%), Gaps = 25/205 (12%)
Query: 339 VGKGGHSHVYRGC-LPDGKELAVKIL-KPSEDVL--KEFASEIEIITALHHRNIISLFGF 394
VG G + V G +AVK L KP + ++ K E+ ++ + H N+I L
Sbjct: 42 VGSGAYGSVCAAFDTKTGLRVAVKKLSKPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 101
Query: 395 CF------EDNNLLLVYDFLSRGSLEENLHGNKKDGNAFGWTERYKVAVGVAEALDYLHN 448
E N++ LV + G+ N+ +K + Y++ G L Y+H+
Sbjct: 102 FTPARSLEEFNDVYLVTHLM--GADLNNIVKCQKLTDDHVQFLIYQILRG----LKYIHS 155
Query: 449 SCEQPVIHKDVKSSNILLSDDFEPQLSDFGLASWLSTSSSHLTCTDVAGTFGYLAPEYFM 508
+ +IH+D+K SN+ +++D E ++ DFGLA T T Y APE +
Sbjct: 156 A---DIIHRDLKPSNLAVNEDCELKILDFGLARHTDDE-----MTGYVATRWYRAPEIML 207
Query: 509 HG-KVSEKIDVYAFGIVLLELLSGK 532
+ ++ +D+++ G ++ ELL+G+
Sbjct: 208 NWMHYNQTVDIWSVGCIMAELLTGR 232
>pdb|1GOL|A Chain A, Coordinates Of Rat Map Kinase Erk2 With An Arginine
Mutation At Position 52
Length = 364
Score = 53.1 bits (126), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 31/96 (32%), Positives = 54/96 (56%), Gaps = 5/96 (5%)
Query: 439 VAEALDYLHNSCEQPVIHKDVKSSNILLSDDFEPQLSDFGLASWLSTSSSHL-TCTDVAG 497
+ L Y+H++ V+H+D+K SN+LL+ + ++ DFGLA H T+
Sbjct: 137 ILRGLKYIHSAN---VLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVA 193
Query: 498 TFGYLAPEYFMHGK-VSEKIDVYAFGIVLLELLSGK 532
T Y APE ++ K ++ ID+++ G +L E+LS +
Sbjct: 194 TRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 229
>pdb|2GPH|A Chain A, Docking Motif Interactions In The Map Kinase Erk2
Length = 364
Score = 53.1 bits (126), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 31/96 (32%), Positives = 54/96 (56%), Gaps = 5/96 (5%)
Query: 439 VAEALDYLHNSCEQPVIHKDVKSSNILLSDDFEPQLSDFGLASWLSTSSSHL-TCTDVAG 497
+ L Y+H++ V+H+D+K SN+LL+ + ++ DFGLA H T+
Sbjct: 137 ILRGLKYIHSA---NVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVA 193
Query: 498 TFGYLAPEYFMHGK-VSEKIDVYAFGIVLLELLSGK 532
T Y APE ++ K ++ ID+++ G +L E+LS +
Sbjct: 194 TRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 229
>pdb|3ZU7|A Chain A, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Map Kinase Erk2
Length = 365
Score = 53.1 bits (126), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 31/96 (32%), Positives = 54/96 (56%), Gaps = 5/96 (5%)
Query: 439 VAEALDYLHNSCEQPVIHKDVKSSNILLSDDFEPQLSDFGLASWLSTSSSHL-TCTDVAG 497
+ L Y+H++ V+H+D+K SN+LL+ + ++ DFGLA H T+
Sbjct: 138 ILRGLKYIHSAN---VLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVA 194
Query: 498 TFGYLAPEYFMHGK-VSEKIDVYAFGIVLLELLSGK 532
T Y APE ++ K ++ ID+++ G +L E+LS +
Sbjct: 195 TRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 230
>pdb|2Y9Q|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4FMQ|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 53.1 bits (126), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 31/96 (32%), Positives = 54/96 (56%), Gaps = 5/96 (5%)
Query: 439 VAEALDYLHNSCEQPVIHKDVKSSNILLSDDFEPQLSDFGLASWLSTSSSHL-TCTDVAG 497
+ L Y+H++ V+H+D+K SN+LL+ + ++ DFGLA H T+
Sbjct: 135 ILRGLKYIHSAN---VLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVA 191
Query: 498 TFGYLAPEYFMHGK-VSEKIDVYAFGIVLLELLSGK 532
T Y APE ++ K ++ ID+++ G +L E+LS +
Sbjct: 192 TRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 227
>pdb|2Z7L|A Chain A, Unphosphorylated Mitogen Activated Protein Kinase Erk2 In
Complex With
(4-{[5-Carbamoyl-4-(3-Methylanilino)pyrimidin
2-Yl]amino}phenyl)acetic Acid
Length = 366
Score = 53.1 bits (126), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 31/96 (32%), Positives = 54/96 (56%), Gaps = 5/96 (5%)
Query: 439 VAEALDYLHNSCEQPVIHKDVKSSNILLSDDFEPQLSDFGLASWLSTSSSHL-TCTDVAG 497
+ L Y+H++ V+H+D+K SN+LL+ + ++ DFGLA H T+
Sbjct: 139 ILRGLKYIHSAN---VLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVA 195
Query: 498 TFGYLAPEYFMHGK-VSEKIDVYAFGIVLLELLSGK 532
T Y APE ++ K ++ ID+++ G +L E+LS +
Sbjct: 196 TRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 231
>pdb|3C9W|A Chain A, Crystal Structure Of Erk-2 With Hypothemycin Covalently
Bound
pdb|3C9W|B Chain B, Crystal Structure Of Erk-2 With Hypothemycin Covalently
Bound
Length = 357
Score = 53.1 bits (126), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 31/96 (32%), Positives = 54/96 (56%), Gaps = 5/96 (5%)
Query: 439 VAEALDYLHNSCEQPVIHKDVKSSNILLSDDFEPQLSDFGLASWLSTSSSHL-TCTDVAG 497
+ L Y+H++ V+H+D+K SN+LL+ + ++ DFGLA H T+
Sbjct: 130 ILRGLKYIHSAN---VLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVA 186
Query: 498 TFGYLAPEYFMHGK-VSEKIDVYAFGIVLLELLSGK 532
T Y APE ++ K ++ ID+++ G +L E+LS +
Sbjct: 187 TRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 222
>pdb|2FYS|B Chain B, Crystal Structure Of Erk2 Complex With Kim Peptide Derived
From Mkp3
pdb|2FYS|A Chain A, Crystal Structure Of Erk2 Complex With Kim Peptide Derived
From Mkp3
pdb|1ERK|A Chain A, Structure Of Signal-Regulated Kinase
pdb|3ERK|A Chain A, The Complex Structure Of The Map Kinase Erk2SB220025
pdb|4ERK|A Chain A, The Complex Structure Of The Map Kinase Erk2OLOMOUCINE
pdb|3QYI|A Chain A, Map Kinase Erk2 Complexed With
1,1-Dioxo-2,3-Dihydrothiophen-3-Yl Benzenesulfonate
Length = 364
Score = 53.1 bits (126), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 31/96 (32%), Positives = 54/96 (56%), Gaps = 5/96 (5%)
Query: 439 VAEALDYLHNSCEQPVIHKDVKSSNILLSDDFEPQLSDFGLASWLSTSSSHL-TCTDVAG 497
+ L Y+H++ V+H+D+K SN+LL+ + ++ DFGLA H T+
Sbjct: 137 ILRGLKYIHSAN---VLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVA 193
Query: 498 TFGYLAPEYFMHGK-VSEKIDVYAFGIVLLELLSGK 532
T Y APE ++ K ++ ID+++ G +L E+LS +
Sbjct: 194 TRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 229
>pdb|3O71|A Chain A, Crystal Structure Of Erk2DCC PEPTIDE COMPLEX
Length = 358
Score = 53.1 bits (126), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 31/96 (32%), Positives = 54/96 (56%), Gaps = 5/96 (5%)
Query: 439 VAEALDYLHNSCEQPVIHKDVKSSNILLSDDFEPQLSDFGLASWLSTSSSHL-TCTDVAG 497
+ L Y+H++ V+H+D+K SN+LL+ + ++ DFGLA H T+
Sbjct: 131 ILRGLKYIHSAN---VLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVA 187
Query: 498 TFGYLAPEYFMHGK-VSEKIDVYAFGIVLLELLSGK 532
T Y APE ++ K ++ ID+++ G +L E+LS +
Sbjct: 188 TRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 223
>pdb|2OJG|A Chain A, Crystal Structure Of Erk2 In Complex With
N,n-dimethyl-4-(4-
Phenyl-1h-pyrazol-3-yl)-1h-pyrrole-2-carboxamide
pdb|2OJI|A Chain A, Crystal Structure Of Erk2 In Complex With
N-Benzyl-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|2OJJ|A Chain A, Crystal Structure Of Erk2 In Complex With (S)-N-(1-(3-
Chloro-4-Fluorophenyl)-2-Hydroxyethyl)-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|3I5Z|A Chain A, Crystal Structure Of Erk2 Bound To
(S)-N-(2-Hydroxy-1-Phenylethyl)-4-
(5-Methyl-2-(Phenylamino)pyrimidin-4-Yl)-1h-Pyrrole-2-
Carboxamide
pdb|3I60|A Chain A, Crystal Structure Of Erk2 Bound To
(s)-4-(2-(2-chlorophenylamino)-5-
Methylpyrimidin-4-yl)-n-(2-hydroxy-1-phenylethyl)-1h-
pyrrole-2- Carboxamide
Length = 380
Score = 53.1 bits (126), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 31/96 (32%), Positives = 54/96 (56%), Gaps = 5/96 (5%)
Query: 439 VAEALDYLHNSCEQPVIHKDVKSSNILLSDDFEPQLSDFGLASWLSTSSSHL-TCTDVAG 497
+ L Y+H++ V+H+D+K SN+LL+ + ++ DFGLA H T+
Sbjct: 153 ILRGLKYIHSAN---VLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVA 209
Query: 498 TFGYLAPEYFMHGK-VSEKIDVYAFGIVLLELLSGK 532
T Y APE ++ K ++ ID+++ G +L E+LS +
Sbjct: 210 TRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 245
>pdb|2A2A|A Chain A, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|B Chain B, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|C Chain C, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|D Chain D, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2CKE|A Chain A, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|B Chain B, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|C Chain C, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|D Chain D, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
Length = 321
Score = 53.1 bits (126), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 42/169 (24%), Positives = 79/169 (46%), Gaps = 14/169 (8%)
Query: 371 KEFASEIEIITALHHRNIISLFGFCFEDNNLLLVYDFLSRGSLEENLHGNKKDGNAFGWT 430
+E E+ I+ + H N+I+L +++L+ + +S G L + L +
Sbjct: 60 EEIEREVSILRQVLHHNVITLHDVYENRTDVVLILELVSGGELFDFL----AQKESLSEE 115
Query: 431 ERYKVAVGVAEALDYLHNSCEQPVIHKDVKSSNILLSDDFEP----QLSDFGLASWLSTS 486
E + + ++YLH + + H D+K NI+L D P +L DFGLA +
Sbjct: 116 EATSFIKQILDGVNYLHT---KKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDG 172
Query: 487 SSHLTCTDVAGTFGYLAPEYFMHGKVSEKIDVYAFGIVLLELLSGKKPI 535
+ ++ GT ++APE + + + D+++ G++ LLSG P
Sbjct: 173 ---VEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPF 218
>pdb|2I6L|A Chain A, Crystal Structure Of Human Mitogen Activated Protein
Kinase 6 (Mapk6)
pdb|2I6L|B Chain B, Crystal Structure Of Human Mitogen Activated Protein
Kinase 6 (Mapk6)
Length = 320
Score = 53.1 bits (126), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 59/244 (24%), Positives = 111/244 (45%), Gaps = 28/244 (11%)
Query: 339 VGKGGHSHVYRGCLPD-GKELAVK-ILKPSEDVLKEFASEIEIITALHHRNIISLF---- 392
+G GG+ V+ D K +A+K I+ +K EI+II L H NI+ +F
Sbjct: 19 LGCGGNGLVFSAVDNDCDKRVAIKKIVLTDPQSVKHALREIKIIRRLDHDNIVKVFEILG 78
Query: 393 ----------GFCFEDNNLLLVYDFLSRGSLEENLHGNKKDGNAFGWTERYKVAVGVAEA 442
G E N++ +V +++ E +L + G R +
Sbjct: 79 PSGSQLTDDVGSLTELNSVYIVQEYM-----ETDLANVLEQGPLLEEHARL-FMYQLLRG 132
Query: 443 LDYLHNSCEQPVIHKDVKSSNILL-SDDFEPQLSDFGLASWLSTSSSHLT-CTDVAGTFG 500
L Y+H++ V+H+D+K +N+ + ++D ++ DFGLA + SH ++ T
Sbjct: 133 LKYIHSAN---VLHRDLKPANLFINTEDLVLKIGDFGLARIMDPHYSHKGHLSEGLVTKW 189
Query: 501 YLAPEYFMH-GKVSEKIDVYAFGIVLLELLSGKKPINSENPKGQESLVMWAKPILKDGKV 559
Y +P + ++ ID++A G + E+L+GK + Q L++ + P++ +
Sbjct: 190 YRSPRLLLSPNNYTKAIDMWAAGCIFAEMLTGKTLFAGAHELEQMQLILESIPVVHEEDR 249
Query: 560 SQLL 563
+LL
Sbjct: 250 QELL 253
>pdb|2FSO|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a)
Activating Mutant
Length = 367
Score = 53.1 bits (126), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 53/205 (25%), Positives = 98/205 (47%), Gaps = 25/205 (12%)
Query: 339 VGKGGHSHVYRGC-LPDGKELAVKIL-KPSEDVL--KEFASEIEIITALHHRNIISLFGF 394
VG G + V G +AVK L +P + ++ K E+ ++ + H N+I L
Sbjct: 37 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 96
Query: 395 CF------EDNNLLLVYDFLSRGSLEENLHGNKKDGNAFGWTERYKVAVGVAEALDYLHN 448
E N++ LV + G+ N+ +K + Y++ G L Y+H+
Sbjct: 97 FTPARSLEEFNDVYLVTHLM--GADLNNIVKCQKLTDDHVQFLIYQILRG----LKYIHS 150
Query: 449 SCEQPVIHKDVKSSNILLSDDFEPQLSDFGLASWLSTSSSHLTCTDVAGTFGYLAPEYFM 508
+ +IH+D+K SN+ +++D E ++ DFGLA + T T Y APE +
Sbjct: 151 A---DIIHRDLKPSNLAVNEDCELKILDFGLARHTADE-----MTGYVATRWYRAPEIML 202
Query: 509 HG-KVSEKIDVYAFGIVLLELLSGK 532
+ ++ +D+++ G ++ ELL+G+
Sbjct: 203 NWMHYNQTVDIWSVGCIMAELLTGR 227
>pdb|1LEW|A Chain A, Crystal Structure Of Map Kinase P38 Complexed To The
Docking Site On Its Nuclear Substrate Mef2a
pdb|1LEZ|A Chain A, Crystal Structure Of Map Kinase P38 Complexed To The
Docking Site On Its Activator Mkk3b
Length = 360
Score = 52.8 bits (125), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 53/205 (25%), Positives = 97/205 (47%), Gaps = 25/205 (12%)
Query: 339 VGKGGHSHVYRGC-LPDGKELAVKIL-KPSEDVL--KEFASEIEIITALHHRNIISLFGF 394
VG G + V G +AVK L +P + ++ K E+ ++ + H N+I L
Sbjct: 30 VGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 89
Query: 395 CF------EDNNLLLVYDFLSRGSLEENLHGNKKDGNAFGWTERYKVAVGVAEALDYLHN 448
E N++ LV + G+ N+ +K + Y++ G L Y+H+
Sbjct: 90 FTPARSLEEFNDVYLVTHLM--GADLNNIVKCQKLTDDHVQFLIYQILRG----LKYIHS 143
Query: 449 SCEQPVIHKDVKSSNILLSDDFEPQLSDFGLASWLSTSSSHLTCTDVAGTFGYLAPEYFM 508
+ +IH+D+K SN+ +++D E ++ DFGLA T T Y APE +
Sbjct: 144 A---DIIHRDLKPSNLAVNEDCELKILDFGLARHTDDE-----MTGYVATRWYRAPEIML 195
Query: 509 HG-KVSEKIDVYAFGIVLLELLSGK 532
+ ++ +D+++ G ++ ELL+G+
Sbjct: 196 NWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|3P4K|A Chain A, The Third Conformation Of P38a Map Kinase Observed In
Phosphorylated P38a And In Solution
Length = 370
Score = 52.8 bits (125), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 53/205 (25%), Positives = 97/205 (47%), Gaps = 25/205 (12%)
Query: 339 VGKGGHSHVYRGC-LPDGKELAVKIL-KPSEDVL--KEFASEIEIITALHHRNIISLFGF 394
VG G + V G +AVK L +P + ++ K E+ ++ + H N+I L
Sbjct: 40 VGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 99
Query: 395 CF------EDNNLLLVYDFLSRGSLEENLHGNKKDGNAFGWTERYKVAVGVAEALDYLHN 448
E N++ LV + G+ N+ +K + Y++ G L Y+H+
Sbjct: 100 FTPARSLEEFNDVYLVTHLM--GADLNNIVKCQKLTDDHVQFLIYQILRG----LKYIHS 153
Query: 449 SCEQPVIHKDVKSSNILLSDDFEPQLSDFGLASWLSTSSSHLTCTDVAGTFGYLAPEYFM 508
+ +IH+D+K SN+ +++D E ++ DFGLA T T Y APE +
Sbjct: 154 A---DIIHRDLKPSNLAVNEDCELKILDFGLARHTDDE-----MTGYVATRWYRAPEIML 205
Query: 509 HG-KVSEKIDVYAFGIVLLELLSGK 532
+ ++ +D+++ G ++ ELL+G+
Sbjct: 206 NWMHYNQTVDIWSVGCIMAELLTGR 230
>pdb|4H3Q|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 52.8 bits (125), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 49/183 (26%), Positives = 87/183 (47%), Gaps = 14/183 (7%)
Query: 357 ELAVKILKPSED--VLKEFASEIEIITALHHRNIISLFGFCFEDNNLLLVYDFLSRGSLE 414
+A+K + P E + EI+I+ A H NII + + ++ + +E
Sbjct: 52 RVAIKKISPFEHQTYCQRTLREIKILLAFRHENIIGINDIIRAPTIEQMKDVYIVQDLME 111
Query: 415 ENLHGNKKD---GNAFGWTERYKVAVGVAEALDYLHNSCEQPVIHKDVKSSNILLSDDFE 471
+L+ K N Y++ G L Y+H++ V+H+D+K SN+LL+ +
Sbjct: 112 TDLYKLLKTQHLSNDHICYFLYQILRG----LKYIHSAN---VLHRDLKPSNLLLNTTSD 164
Query: 472 PQLSDFGLASWLSTSSSHL-TCTDVAGTFGYLAPEYFMHGK-VSEKIDVYAFGIVLLELL 529
++ DFGLA H T+ T Y APE ++ K ++ ID+++ G +L E+L
Sbjct: 165 LKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEML 224
Query: 530 SGK 532
S +
Sbjct: 225 SNR 227
>pdb|3ZUU|A Chain A, The Structure Of Ost1 (D160a, S175d) Kinase In Complex
With Gold
pdb|3ZUU|B Chain B, The Structure Of Ost1 (D160a, S175d) Kinase In Complex
With Gold
Length = 362
Score = 52.8 bits (125), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 49/186 (26%), Positives = 78/186 (41%), Gaps = 10/186 (5%)
Query: 358 LAVKILKPSEDVLKEFASEIEIITALHHRNIISLFGFCFEDNNLLLVYDFLSRGSLEENL 417
+AVK ++ E + + EI +L H NI+ +L +V ++ S G L E +
Sbjct: 47 VAVKYIERGEKIDENVKREIINHRSLRHPNIVRFKEVILTPTHLAIVMEYASGGELFERI 106
Query: 418 HGNKKDGNAFGWTERYKVAVGVAEALDYLHNSCEQPVIHKDVKSSNILLSDDFEPQLSDF 477
+ F E + + Y H V H+D+K N LL P+L
Sbjct: 107 ----CNAGRFSEDEARFFFQQLISGVSYCH---AMQVCHRDLKLENTLLDGSPAPRLKIC 159
Query: 478 GLASWLSTSSSHLTCTDVAGTFGYLAPEYFMHGKVSEKI-DVYAFGIVLLELLSGKKPI- 535
+ +S H D GT Y+APE + + K+ DV++ G+ L +L G P
Sbjct: 160 AFG-YSKSSVLHSQPKDTVGTPAYIAPEVLLKKEYDGKVADVWSCGVTLYVMLVGAYPFE 218
Query: 536 NSENPK 541
+ E PK
Sbjct: 219 DPEEPK 224
>pdb|4AW2|A Chain A, Crystal Structure Of Cdc42 Binding Protein Kinase Alpha
(Mrck Alpha)
Length = 437
Score = 52.8 bits (125), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 60/214 (28%), Positives = 100/214 (46%), Gaps = 21/214 (9%)
Query: 338 LVGKGGHSHVYRGCLPDG-KELAVKILKPSEDVLKE-----FASEIEIITALHHRNIISL 391
++G+G V L + K A+KIL E +LK F E +++ + I +L
Sbjct: 81 VIGRGAFGEVAVVKLKNADKVFAMKILNKWE-MLKRAETACFREERDVLVNGDSKWITTL 139
Query: 392 FGFCFEDNNLLLVYDFLSRGSLEENLHGNKKDGNAFGWTERYKVAVGVAEALDYLHNSCE 451
+DNNL LV D+ G L L +K + R+ +A V A+D +H +
Sbjct: 140 HYAFQDDNNLYLVMDYYVGGDLLTLL--SKFEDRLPEEMARFYLAEMVI-AIDSVH---Q 193
Query: 452 QPVIHKDVKSSNILLSDDFEPQLSDFGLASWLSTSSSHLTCTDVA-GTFGYLAPEYFM-- 508
+H+D+K NIL+ + +L+DFG S L + VA GT Y++PE
Sbjct: 194 LHYVHRDIKPDNILMDMNGHIRLADFG--SCLKLMEDGTVQSSVAVGTPDYISPEILQAM 251
Query: 509 ---HGKVSEKIDVYAFGIVLLELLSGKKPINSEN 539
G+ + D ++ G+ + E+L G+ P +E+
Sbjct: 252 EGGKGRYGPECDWWSLGVCMYEMLYGETPFYAES 285
>pdb|1WZY|A Chain A, Crystal Structure Of Human Erk2 Complexed With A
Pyrazolopyridazine Derivative
pdb|3W55|A Chain A, The Structure Of Erk2 In Complex With Fr148083
Length = 368
Score = 52.8 bits (125), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 31/96 (32%), Positives = 54/96 (56%), Gaps = 5/96 (5%)
Query: 439 VAEALDYLHNSCEQPVIHKDVKSSNILLSDDFEPQLSDFGLASWLSTSSSHL-TCTDVAG 497
+ L Y+H++ V+H+D+K SN+LL+ + ++ DFGLA H T+
Sbjct: 141 ILRGLKYIHSAN---VLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVA 197
Query: 498 TFGYLAPEYFMHGK-VSEKIDVYAFGIVLLELLSGK 532
T Y APE ++ K ++ ID+++ G +L E+LS +
Sbjct: 198 TRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 233
>pdb|1TVO|A Chain A, The Structure Of Erk2 In Complex With A Small Molecule
Inhibitor
Length = 368
Score = 52.8 bits (125), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 31/96 (32%), Positives = 54/96 (56%), Gaps = 5/96 (5%)
Query: 439 VAEALDYLHNSCEQPVIHKDVKSSNILLSDDFEPQLSDFGLASWLSTSSSHL-TCTDVAG 497
+ L Y+H++ V+H+D+K SN+LL+ + ++ DFGLA H T+
Sbjct: 133 ILRGLKYIHSAN---VLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVA 189
Query: 498 TFGYLAPEYFMHGK-VSEKIDVYAFGIVLLELLSGK 532
T Y APE ++ K ++ ID+++ G +L E+LS +
Sbjct: 190 TRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 225
>pdb|3D7Z|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biphenyl
Amide Inhibitor
Length = 360
Score = 52.8 bits (125), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 53/205 (25%), Positives = 97/205 (47%), Gaps = 25/205 (12%)
Query: 339 VGKGGHSHVYRGC-LPDGKELAVKIL-KPSEDVL--KEFASEIEIITALHHRNIISLFGF 394
VG G + V G +AVK L +P + ++ K E+ ++ + H N+I L
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 89
Query: 395 CF------EDNNLLLVYDFLSRGSLEENLHGNKKDGNAFGWTERYKVAVGVAEALDYLHN 448
E N++ LV + G+ N+ +K + Y++ G L Y+H+
Sbjct: 90 FTPARSLEEFNDVYLVTHLM--GADLNNIVKXQKLTDDHVQFLIYQILRG----LKYIHS 143
Query: 449 SCEQPVIHKDVKSSNILLSDDFEPQLSDFGLASWLSTSSSHLTCTDVAGTFGYLAPEYFM 508
+ +IH+D+K SN+ +++D E ++ DFGLA T T Y APE +
Sbjct: 144 A---DIIHRDLKPSNLAVNEDCELKILDFGLARHTDDE-----MTGYVATRWYRAPEIML 195
Query: 509 HG-KVSEKIDVYAFGIVLLELLSGK 532
+ ++ +D+++ G ++ ELL+G+
Sbjct: 196 NWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|2ZOQ|A Chain A, Structural Dissection Of Human Mitogen-Activated Kinase
Erk1
pdb|2ZOQ|B Chain B, Structural Dissection Of Human Mitogen-Activated Kinase
Erk1
Length = 382
Score = 52.8 bits (125), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 30/96 (31%), Positives = 54/96 (56%), Gaps = 5/96 (5%)
Query: 439 VAEALDYLHNSCEQPVIHKDVKSSNILLSDDFEPQLSDFGLASWLSTSSSHLT-CTDVAG 497
+ L Y+H++ V+H+D+K SN+L++ + ++ DFGLA H T+
Sbjct: 153 ILRGLKYIHSAN---VLHRDLKPSNLLINTTCDLKICDFGLARIADPEHDHTGFLTEXVA 209
Query: 498 TFGYLAPEYFMHGK-VSEKIDVYAFGIVLLELLSGK 532
T Y APE ++ K ++ ID+++ G +L E+LS +
Sbjct: 210 TRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 245
>pdb|3BLH|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1
pdb|3BLQ|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1 IN COMPLEX WITH
ATP
pdb|3BLR|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1 IN COMPLEX WITH
Flavopiridol
pdb|3MY1|A Chain A, Structure Of Cdk9CYCLINT1 IN COMPLEX WITH DRB
pdb|3LQ5|A Chain A, Structure Of Cdk9CYCLINT IN COMPLEX WITH S-Cr8
pdb|3TN8|A Chain A, Cdk9CYCLIN T IN COMPLEX WITH CAN508
pdb|3TNH|A Chain A, Cdk9CYCLIN T IN COMPLEX WITH CAN508
pdb|3TNI|A Chain A, Structure Of Cdk9CYCLIN T F241L
pdb|4BCH|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCI|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCJ|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 331
Score = 52.8 bits (125), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 46/176 (26%), Positives = 84/176 (47%), Gaps = 21/176 (11%)
Query: 376 EIEIITALHHRNIISLFGFCFED--------NNLLLVYDFLSRGSLEENLHGNKKDGNA- 426
EI+I+ L H N+++L C ++ LV+DF E +L G +
Sbjct: 67 EIKILQLLKHENVVNLIEICRTKASPYNRCKGSIYLVFDFC-----EHDLAGLLSNVLVK 121
Query: 427 FGWTERYKVAVGVAEALDYLHNSCEQPVIHKDVKSSNILLSDDFEPQLSDFGLASW--LS 484
F +E +V + L Y+H + ++H+D+K++N+L++ D +L+DFGLA L+
Sbjct: 122 FTLSEIKRVMQMLLNGLYYIHRN---KILHRDMKAANVLITRDGVLKLADFGLARAFSLA 178
Query: 485 TSSSHLTCTDVAGTFGYLAPEYFMHGK-VSEKIDVYAFGIVLLELLSGKKPINSEN 539
+S + T Y PE + + ID++ G ++ E+ + + PI N
Sbjct: 179 KNSQPNRYXNRVVTLWYRPPELLLGERDYGPPIDLWGAGCIMAEMWT-RSPIMQGN 233
>pdb|1BMK|A Chain A, The Complex Structure Of The Map Kinase P38SB218655
pdb|1P38|A Chain A, The Structure Of The Map Kinase P38 At 2.1 Angstoms
Resolution
Length = 379
Score = 52.8 bits (125), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 49/188 (26%), Positives = 92/188 (48%), Gaps = 24/188 (12%)
Query: 355 GKELAVKIL-KPSEDVL--KEFASEIEIITALHHRNIISLFGFCF------EDNNLLLVY 405
G +AVK L +P + ++ K E+ ++ + H N+I L E N++ LV
Sbjct: 66 GHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVT 125
Query: 406 DFLSRGSLEENLHGNKKDGNAFGWTERYKVAVGVAEALDYLHNSCEQPVIHKDVKSSNIL 465
+ G+ N+ +K + Y++ G L Y+H++ +IH+D+K SN+
Sbjct: 126 HLM--GADLNNIVKCQKLTDDHVQFLIYQILRG----LKYIHSA---DIIHRDLKPSNLA 176
Query: 466 LSDDFEPQLSDFGLASWLSTSSSHLTCTDVAGTFGYLAPEYFMHG-KVSEKIDVYAFGIV 524
+++D E ++ DFGLA T T Y APE ++ ++ +D+++ G +
Sbjct: 177 VNEDCELKILDFGLARHTDDE-----MTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCI 231
Query: 525 LLELLSGK 532
+ ELL+G+
Sbjct: 232 MAELLTGR 239
>pdb|3TG1|A Chain A, Crystal Structure Of P38alpha In Complex With A Mapk
Docking Partner
Length = 380
Score = 52.8 bits (125), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 49/188 (26%), Positives = 92/188 (48%), Gaps = 24/188 (12%)
Query: 355 GKELAVKIL-KPSEDVL--KEFASEIEIITALHHRNIISLFGFCF------EDNNLLLVY 405
G +AVK L +P + ++ K E+ ++ + H N+I L E N++ LV
Sbjct: 67 GHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVT 126
Query: 406 DFLSRGSLEENLHGNKKDGNAFGWTERYKVAVGVAEALDYLHNSCEQPVIHKDVKSSNIL 465
+ G+ N+ +K + Y++ G L Y+H++ +IH+D+K SN+
Sbjct: 127 HLM--GADLNNIVKCQKLTDDHVQFLIYQILRG----LKYIHSA---DIIHRDLKPSNLA 177
Query: 466 LSDDFEPQLSDFGLASWLSTSSSHLTCTDVAGTFGYLAPEYFMHG-KVSEKIDVYAFGIV 524
+++D E ++ DFGLA T T Y APE ++ ++ +D+++ G +
Sbjct: 178 VNEDCELKILDFGLARHTDDE-----MTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCI 232
Query: 525 LLELLSGK 532
+ ELL+G+
Sbjct: 233 MAELLTGR 240
>pdb|3CEK|A Chain A, Crystal Structure Of Human Dual Specificity Protein Kinase
(ttk)
pdb|3GFW|A Chain A, Crystal Structure Of Human Dual Specificity Protein Kinase
(Ttk) In Complex With A Pyrolo-Pyridin Ligand
Length = 313
Score = 52.8 bits (125), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 52/212 (24%), Positives = 92/212 (43%), Gaps = 25/212 (11%)
Query: 339 VGKGGHSHVYRGCLPDGKELAVKILKPSE---DVLKEFASEIEIITAL--HHRNIISLFG 393
+G GG S V++ + A+K + E L + +EI + L H II L+
Sbjct: 36 IGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYD 95
Query: 394 FCFEDNNLLLVYDFLSRGSLEENLHGNKKDGNAFGWTERYKVAVGVAEALDYLHNSCEQP 453
+ D + +V + G+++ N KK + W ER + EA+ +H +
Sbjct: 96 YEITDQYIYMV---MECGNIDLN-SWLKKKKSIDPW-ERKSYWKNMLEAVHTIH---QHG 147
Query: 454 VIHKDVKSSNILLSDDFEPQLSDFGLASWLSTSSSHLTCTDVAGTFGYLAPEYFMHGKVS 513
++H D+K +N L+ D +L DFG+A+ + ++ + GT Y+ PE S
Sbjct: 148 IVHSDLKPANFLIVDGML-KLIDFGIANQMQPDTTSVVKDSQVGTVNYMPPEAIKDMSSS 206
Query: 514 EK-----------IDVYAFGIVLLELLSGKKP 534
+ DV++ G +L + GK P
Sbjct: 207 RENGKSKSKISPKSDVWSLGCILYYMTYGKTP 238
>pdb|3MI9|A Chain A, Crystal Structure Of Hiv-1 Tat Complexed With Human P-Tefb
pdb|3MIA|A Chain A, Crystal Structure Of Hiv-1 Tat Complexed With Atp-Bound
Human P-Tefb
Length = 351
Score = 52.8 bits (125), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 46/176 (26%), Positives = 84/176 (47%), Gaps = 21/176 (11%)
Query: 376 EIEIITALHHRNIISLFGFCFED--------NNLLLVYDFLSRGSLEENLHGNKKDGNA- 426
EI+I+ L H N+++L C ++ LV+DF E +L G +
Sbjct: 66 EIKILQLLKHENVVNLIEICRTKASPYNRCKGSIYLVFDFC-----EHDLAGLLSNVLVK 120
Query: 427 FGWTERYKVAVGVAEALDYLHNSCEQPVIHKDVKSSNILLSDDFEPQLSDFGLASW--LS 484
F +E +V + L Y+H + ++H+D+K++N+L++ D +L+DFGLA L+
Sbjct: 121 FTLSEIKRVMQMLLNGLYYIHRN---KILHRDMKAANVLITRDGVLKLADFGLARAFSLA 177
Query: 485 TSSSHLTCTDVAGTFGYLAPEYFMHGK-VSEKIDVYAFGIVLLELLSGKKPINSEN 539
+S + T Y PE + + ID++ G ++ E+ + + PI N
Sbjct: 178 KNSQPNRYXNRVVTLWYRPPELLLGERDYGPPIDLWGAGCIMAEMWT-RSPIMQGN 232
>pdb|2WTK|B Chain B, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha
Complex
pdb|2WTK|E Chain E, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha
Complex
Length = 373
Score = 52.8 bits (125), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 64/229 (27%), Positives = 101/229 (44%), Gaps = 33/229 (14%)
Query: 331 SNFLPE-------YLVGKGGHSHVYRGCL---PDGKELAVKILK---PSEDVLKEFASEI 377
S+FLPE ++GKG + P G+ + V+ + S +++ E+
Sbjct: 2 SSFLPEGGCYELLTVIGKGFEDLMTVNLARYKPTGEYVTVRRINLEACSNEMVTFLQGEL 61
Query: 378 EIITALHHRNIISLFGFCFEDNNLLLVYDFLSRGSLEENLHGNKKDG-NAFGWTERYKVA 436
+ +H NI+ DN L +V F++ GS ++ + + DG N +
Sbjct: 62 HVSKLFNHPNIVPYRATFIADNELWVVTSFMAYGSAKDLICTHFMDGMNELAIA---YIL 118
Query: 437 VGVAEALDYLHNSCEQPVIHKDVKSSNILLSDDFEPQLSDFGLASWLSTSSSHLTCTDVA 496
GV +ALDY+H+ +H+ VK+S+IL+S D + LS GL S LS SH V
Sbjct: 119 QGVLKALDYIHH---MGYVHRSVKASHILISVDGKVYLS--GLRSNLSM-ISHGQRQRVV 172
Query: 497 GTF--------GYLAPEYFMHG--KVSEKIDVYAFGIVLLELLSGKKPI 535
F +L+PE K D+Y+ GI EL +G P
Sbjct: 173 HDFPKYSVKVLPWLSPEVLQQNLQGYDAKSDIYSVGITACELANGHVPF 221
>pdb|2X9E|A Chain A, Human Mps1 In Complex With Nms-P715
Length = 317
Score = 52.8 bits (125), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 52/212 (24%), Positives = 91/212 (42%), Gaps = 25/212 (11%)
Query: 339 VGKGGHSHVYRGCLPDGKELAVKILKPSE---DVLKEFASEIEIITAL--HHRNIISLFG 393
+G GG S V++ + A+K + E L + +EI + L H II L+
Sbjct: 20 IGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYD 79
Query: 394 FCFEDNNLLLVYDFLSRGSLEENLHGNKKDGNAFGWTERYKVAVGVAEALDYLHNSCEQP 453
+ D +Y + G+++ N KK + W ER + EA+ +H +
Sbjct: 80 YEITDQ---YIYMVMECGNIDLN-SWLKKKKSIDPW-ERKSYWKNMLEAVHTIH---QHG 131
Query: 454 VIHKDVKSSNILLSDDFEPQLSDFGLASWLSTSSSHLTCTDVAGTFGYLAPEYFMHGKVS 513
++H D+K +N L+ D +L DFG+A+ + ++ + GT Y+ PE S
Sbjct: 132 IVHSDLKPANFLIVDGML-KLIDFGIANQMQPDTTSVVKDSQVGTVNYMPPEAIKDMSSS 190
Query: 514 EK-----------IDVYAFGIVLLELLSGKKP 534
+ DV++ G +L + GK P
Sbjct: 191 RENGKSKSKISPKSDVWSLGCILYYMTYGKTP 222
>pdb|2OZA|B Chain B, Structure Of P38alpha Complex
pdb|3P78|A Chain A, P38 Inhibitor-Bound
pdb|3P79|A Chain A, P38 Inhibitor-Bound
pdb|3P7A|A Chain A, P38 Inhibitor-Bound
pdb|3P7B|A Chain A, P38 Inhibitor-Bound
pdb|3P7C|A Chain A, P38 Inhibitor-Bound
pdb|3P5K|A Chain A, P38 Inhibitor-Bound
Length = 366
Score = 52.8 bits (125), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 49/188 (26%), Positives = 92/188 (48%), Gaps = 24/188 (12%)
Query: 355 GKELAVKIL-KPSEDVL--KEFASEIEIITALHHRNIISLFGFCF------EDNNLLLVY 405
G +AVK L +P + ++ K E+ ++ + H N+I L E N++ LV
Sbjct: 53 GHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVT 112
Query: 406 DFLSRGSLEENLHGNKKDGNAFGWTERYKVAVGVAEALDYLHNSCEQPVIHKDVKSSNIL 465
+ G+ N+ +K + Y++ G L Y+H++ +IH+D+K SN+
Sbjct: 113 HLM--GADLNNIVKCQKLTDDHVQFLIYQILRG----LKYIHSA---DIIHRDLKPSNLA 163
Query: 466 LSDDFEPQLSDFGLASWLSTSSSHLTCTDVAGTFGYLAPEYFMHG-KVSEKIDVYAFGIV 524
+++D E ++ DFGLA T T Y APE ++ ++ +D+++ G +
Sbjct: 164 VNEDCELKILDFGLARHTDDE-----MTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCI 218
Query: 525 LLELLSGK 532
+ ELL+G+
Sbjct: 219 MAELLTGR 226
>pdb|2GTM|A Chain A, Mutated Mouse P38 Map Kinase Domain In Complex With
Inhibitor Pg-892579
pdb|2GTN|A Chain A, Mutated Map Kinase P38 (mus Musculus) In Complex With
Inhbitor Pg-951717
Length = 348
Score = 52.8 bits (125), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 51/204 (25%), Positives = 97/204 (47%), Gaps = 24/204 (11%)
Query: 355 GKELAVKIL-KPSEDVL--KEFASEIEIITALHHRNIISLFGFCF------EDNNLLLVY 405
G +AVK L +P + ++ K E+ ++ + H N+I L E N++ LV
Sbjct: 43 GHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVT 102
Query: 406 DFLSRGSLEENLHGNKKDGNAFGWTERYKVAVGVAEALDYLHNSCEQPVIHKDVKSSNIL 465
+ G+ N+ +K + Y++ G L Y+H++ +IH+D+K SN+
Sbjct: 103 HLM--GADLNNIVKCQKLTDDHVQFLIYQILRG----LKYIHSA---DIIHRDLKPSNLA 153
Query: 466 LSDDFEPQLSDFGLASWLSTSSSHLTCTDVAGTFGYLAPEYFMHG-KVSEKIDVYAFGIV 524
+++D E ++ DFGLA T T Y APE ++ ++ +D+++ G +
Sbjct: 154 VNEDCELKILDFGLARHTDDE-----MTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCI 208
Query: 525 LLELLSGKKPINSENPKGQESLVM 548
+ ELL+G+ + Q L++
Sbjct: 209 MAELLTGRTLFPGTDHIDQLKLIL 232
>pdb|2BAL|A Chain A, P38alpha Map Kinase Bound To Pyrazoloamine
pdb|4AA5|A Chain A, P38alpha Map Kinase Bound To Cmpd 33
Length = 365
Score = 52.8 bits (125), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 53/205 (25%), Positives = 97/205 (47%), Gaps = 25/205 (12%)
Query: 339 VGKGGHSHVYRGC-LPDGKELAVKIL-KPSEDVL--KEFASEIEIITALHHRNIISLFGF 394
VG G + V G +AVK L +P + ++ K E+ ++ + H N+I L
Sbjct: 35 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 94
Query: 395 CF------EDNNLLLVYDFLSRGSLEENLHGNKKDGNAFGWTERYKVAVGVAEALDYLHN 448
E N++ LV + G+ N+ +K + Y++ G L Y+H+
Sbjct: 95 FTPARSLEEFNDVYLVTHLM--GADLNNIVKCQKLTDDHVQFLIYQILRG----LKYIHS 148
Query: 449 SCEQPVIHKDVKSSNILLSDDFEPQLSDFGLASWLSTSSSHLTCTDVAGTFGYLAPEYFM 508
+ +IH+D+K SN+ +++D E ++ DFGLA T T Y APE +
Sbjct: 149 A---DIIHRDLKPSNLAVNEDXELKILDFGLARHTDDE-----MTGYVATRWYRAPEIML 200
Query: 509 HG-KVSEKIDVYAFGIVLLELLSGK 532
+ ++ +D+++ G ++ ELL+G+
Sbjct: 201 NWMHYNQTVDIWSVGCIMAELLTGR 225
>pdb|3ODY|X Chain X, Crystal Structure Of P38alpha Y323q Active Mutant
Length = 360
Score = 52.4 bits (124), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 53/205 (25%), Positives = 97/205 (47%), Gaps = 25/205 (12%)
Query: 339 VGKGGHSHVYRGC-LPDGKELAVKIL-KPSEDVL--KEFASEIEIITALHHRNIISLFGF 394
VG G + V G +AVK L +P + ++ K E+ ++ + H N+I L
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 89
Query: 395 CF------EDNNLLLVYDFLSRGSLEENLHGNKKDGNAFGWTERYKVAVGVAEALDYLHN 448
E N++ LV + G+ N+ +K + Y++ G L Y+H+
Sbjct: 90 FTPARSLEEFNDVYLVTHLM--GADLNNIVKCQKLTDDHVQFLIYQILRG----LKYIHS 143
Query: 449 SCEQPVIHKDVKSSNILLSDDFEPQLSDFGLASWLSTSSSHLTCTDVAGTFGYLAPEYFM 508
+ +IH+D+K SN+ +++D E ++ DFGLA T T Y APE +
Sbjct: 144 A---DIIHRDLKPSNLAVNEDCELKILDFGLARHTDDE-----MTGYVATRWYRAPEIML 195
Query: 509 HG-KVSEKIDVYAFGIVLLELLSGK 532
+ ++ +D+++ G ++ ELL+G+
Sbjct: 196 NWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|3VUK|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M5 In Map
Kinase Jnk1
Length = 370
Score = 52.4 bits (124), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 42/165 (25%), Positives = 79/165 (47%), Gaps = 15/165 (9%)
Query: 371 KEFASEIEIITALHHRNIISLFGFCFEDNNLLLVYD-FLSRGSLEENLHG---NKKDGNA 426
K E+ ++ ++H+NII L +L D ++ ++ NL + D
Sbjct: 68 KRAYRELVLMKVVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLSQVIQMELDHER 127
Query: 427 FGWTERYKVAVGVAEALDYLHNSCEQPVIHKDVKSSNILLSDDFEPQLSDFGLASWLSTS 486
+ Y++ VG+ +LH++ +IH+D+K SNI++ D ++ DFGLA T+
Sbjct: 128 MSYL-LYQMLVGIK----HLHSAG---IIHRDLKPSNIVVKSDATLKILDFGLA---RTA 176
Query: 487 SSHLTCTDVAGTFGYLAPEYFMHGKVSEKIDVYAFGIVLLELLSG 531
+ T T Y APE + E +D+++ G ++ E++ G
Sbjct: 177 GTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKG 221
>pdb|3ODZ|X Chain X, Crystal Structure Of P38alpha Y323r Active Mutant
Length = 360
Score = 52.4 bits (124), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 53/205 (25%), Positives = 97/205 (47%), Gaps = 25/205 (12%)
Query: 339 VGKGGHSHVYRGC-LPDGKELAVKIL-KPSEDVL--KEFASEIEIITALHHRNIISLFGF 394
VG G + V G +AVK L +P + ++ K E+ ++ + H N+I L
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 89
Query: 395 CF------EDNNLLLVYDFLSRGSLEENLHGNKKDGNAFGWTERYKVAVGVAEALDYLHN 448
E N++ LV + G+ N+ +K + Y++ G L Y+H+
Sbjct: 90 FTPARSLEEFNDVYLVTHLM--GADLNNIVKCQKLTDDHVQFLIYQILRG----LKYIHS 143
Query: 449 SCEQPVIHKDVKSSNILLSDDFEPQLSDFGLASWLSTSSSHLTCTDVAGTFGYLAPEYFM 508
+ +IH+D+K SN+ +++D E ++ DFGLA T T Y APE +
Sbjct: 144 A---DIIHRDLKPSNLAVNEDCELKILDFGLARHTDDE-----MTGYVATRWYRAPEIML 195
Query: 509 HG-KVSEKIDVYAFGIVLLELLSGK 532
+ ++ +D+++ G ++ ELL+G+
Sbjct: 196 NWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|3OD6|X Chain X, Crystal Structure Of P38alpha Y323t Active Mutant
Length = 360
Score = 52.4 bits (124), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 53/205 (25%), Positives = 97/205 (47%), Gaps = 25/205 (12%)
Query: 339 VGKGGHSHVYRGC-LPDGKELAVKIL-KPSEDVL--KEFASEIEIITALHHRNIISLFGF 394
VG G + V G +AVK L +P + ++ K E+ ++ + H N+I L
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 89
Query: 395 CF------EDNNLLLVYDFLSRGSLEENLHGNKKDGNAFGWTERYKVAVGVAEALDYLHN 448
E N++ LV + G+ N+ +K + Y++ G L Y+H+
Sbjct: 90 FTPARSLEEFNDVYLVTHLM--GADLNNIVKCQKLTDDHVQFLIYQILRG----LKYIHS 143
Query: 449 SCEQPVIHKDVKSSNILLSDDFEPQLSDFGLASWLSTSSSHLTCTDVAGTFGYLAPEYFM 508
+ +IH+D+K SN+ +++D E ++ DFGLA T T Y APE +
Sbjct: 144 A---DIIHRDLKPSNLAVNEDCELKILDFGLARHTDDE-----MTGYVATRWYRAPEIML 195
Query: 509 HG-KVSEKIDVYAFGIVLLELLSGK 532
+ ++ +D+++ G ++ ELL+G+
Sbjct: 196 NWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|3GNI|B Chain B, Structure Of Strad And Mo25
Length = 389
Score = 52.4 bits (124), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 64/233 (27%), Positives = 101/233 (43%), Gaps = 33/233 (14%)
Query: 327 LSATSNFLPE-------YLVGKGGHSHVYRGCL---PDGKELAVKILK---PSEDVLKEF 373
S+FLPE ++GKG + P G+ + V+ + S +++
Sbjct: 14 FQGMSSFLPEGGCYELLTVIGKGFEDLMTVNLARYKPTGEYVTVRRINLEACSNEMVTFL 73
Query: 374 ASEIEIITALHHRNIISLFGFCFEDNNLLLVYDFLSRGSLEENLHGNKKDG-NAFGWTER 432
E+ + +H NI+ DN L +V F++ GS ++ + + DG N
Sbjct: 74 QGELHVSKLFNHPNIVPYRATFIADNELWVVTSFMAYGSAKDLICTHFMDGMNELAIA-- 131
Query: 433 YKVAVGVAEALDYLHNSCEQPVIHKDVKSSNILLSDDFEPQLSDFGLASWLSTSSSHLTC 492
+ GV +ALDY+H+ +H+ VK+S+IL+S D + LS GL S LS SH
Sbjct: 132 -YILQGVLKALDYIHH---MGYVHRSVKASHILISVDGKVYLS--GLRSNLSM-ISHGQR 184
Query: 493 TDVAGTF--------GYLAPEYFMHG--KVSEKIDVYAFGIVLLELLSGKKPI 535
V F +L+PE K D+Y+ GI EL +G P
Sbjct: 185 QRVVHDFPKYSVKVLPWLSPEVLQQNLQGYDAKSDIYSVGITACELANGHVPF 237
>pdb|2ZMC|A Chain A, Crystal Structure Of Human Mitotic Checkpoint Kinase Mps1
Catalytic Domain Apo Form
Length = 390
Score = 52.4 bits (124), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 53/214 (24%), Positives = 95/214 (44%), Gaps = 27/214 (12%)
Query: 339 VGKGGHSHVYRGCLPDGKEL-AVKILKPSE---DVLKEFASEIEIITAL--HHRNIISLF 392
+G GG S V++ L + K++ A+K + E L + +EI + L H II L+
Sbjct: 64 IGSGGSSKVFQ-VLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLY 122
Query: 393 GFCFEDNNLLLVYDFLSRGSLEENLHGNKKDGNAFGWTERYKVAVGVAEALDYLHNSCEQ 452
+ D + +V + G+++ N KK + ER + EA+ +H +
Sbjct: 123 DYEITDQYIYMV---MECGNIDLNSWLKKK--KSIDPWERKSYWKNMLEAVHTIH---QH 174
Query: 453 PVIHKDVKSSNILLSDDFEPQLSDFGLASWLSTSSSHLTCTDVAGTFGYLAPEYFMHGKV 512
++H D+K +N L+ D +L DFG+A+ + ++ + GT Y+ PE
Sbjct: 175 GIVHSDLKPANFLIVDGM-LKLIDFGIANQMQPDTTSVVKDSQVGTVNYMPPEAIKDMSS 233
Query: 513 SEK-----------IDVYAFGIVLLELLSGKKPI 535
S + DV++ G +L + GK P
Sbjct: 234 SRENGKSKSKISPKSDVWSLGCILYYMTYGKTPF 267
>pdb|3SAY|A Chain A, Crystal Structure Of Human Glycogen Synthase Kinase 3 Beta
(Gsk3b) In Complex With Inhibitor 142
pdb|3SAY|B Chain B, Crystal Structure Of Human Glycogen Synthase Kinase 3 Beta
(Gsk3b) In Complex With Inhibitor 142
Length = 430
Score = 52.4 bits (124), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 61/207 (29%), Positives = 94/207 (45%), Gaps = 25/207 (12%)
Query: 338 LVGKGGHSHVYRGCLPDGKELAVKILKPSEDVLKEFAS-EIEIITALHHRNIISLFGFCF 396
++G G VY+ L D EL V I K +D K F + E++I+ L H NI+ L F +
Sbjct: 61 VIGNGSFGVVYQAKLCDSGEL-VAIKKVLQD--KRFKNRELQIMRKLDHCNIVRLRYFFY 117
Query: 397 EDNN------LLLVYDFLSRGSLEENLHGNK-KDGNAFGWTERYKVAVGVAEALDYLHNS 449
L LV D++ H ++ K + + Y + +L Y+H+
Sbjct: 118 SSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQL--FRSLAYIHSF 175
Query: 450 CEQPVIHKDVKSSNILLSDDFEP-QLSDFGLASWLSTSSSHLT--CTDVAGTFGYLAPEY 506
+ H+D+K N+LL D +L DFG A L +++ C+ Y APE
Sbjct: 176 G---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXICSRY-----YRAPEL 227
Query: 507 -FMHGKVSEKIDVYAFGIVLLELLSGK 532
F + IDV++ G VL ELL G+
Sbjct: 228 IFGATDYTSSIDVWSAGCVLAELLLGQ 254
>pdb|1I09|A Chain A, Structure Of Glycogen Synthase Kinase-3 (Gsk3b)
pdb|1I09|B Chain B, Structure Of Glycogen Synthase Kinase-3 (Gsk3b)
pdb|1J1B|A Chain A, Binary Complex Structure Of Human Tau Protein Kinase I
With Amppnp
pdb|1J1B|B Chain B, Binary Complex Structure Of Human Tau Protein Kinase I
With Amppnp
pdb|1J1C|A Chain A, Binary Complex Structure Of Human Tau Protein Kinase I
With Adp
pdb|1J1C|B Chain B, Binary Complex Structure Of Human Tau Protein Kinase I
With Adp
pdb|2JLD|A Chain A, Extremely Tight Binding Of Ruthenium Complex To Glycogen
Synthase Kinase 3
pdb|2JLD|B Chain B, Extremely Tight Binding Of Ruthenium Complex To Glycogen
Synthase Kinase 3
pdb|3M1S|A Chain A, Structure Of Ruthenium Half-Sandwich Complex Bound To
Glycogen Synthase Kinase 3
pdb|3M1S|B Chain B, Structure Of Ruthenium Half-Sandwich Complex Bound To
Glycogen Synthase Kinase 3
pdb|3PUP|A Chain A, Structure Of Glycogen Synthase Kinase 3 Beta (Gsk3b) In
Complex With A Ruthenium Octasporine Ligand (Os1)
pdb|3PUP|B Chain B, Structure Of Glycogen Synthase Kinase 3 Beta (Gsk3b) In
Complex With A Ruthenium Octasporine Ligand (Os1)
Length = 420
Score = 52.4 bits (124), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 61/207 (29%), Positives = 94/207 (45%), Gaps = 25/207 (12%)
Query: 338 LVGKGGHSHVYRGCLPDGKELAVKILKPSEDVLKEFAS-EIEIITALHHRNIISLFGFCF 396
++G G VY+ L D EL V I K +D K F + E++I+ L H NI+ L F +
Sbjct: 61 VIGNGSFGVVYQAKLCDSGEL-VAIKKVLQD--KRFKNRELQIMRKLDHCNIVRLRYFFY 117
Query: 397 EDNN------LLLVYDFLSRGSLEENLHGNK-KDGNAFGWTERYKVAVGVAEALDYLHNS 449
L LV D++ H ++ K + + Y + +L Y+H+
Sbjct: 118 SSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQL--FRSLAYIHSF 175
Query: 450 CEQPVIHKDVKSSNILLSDDFEP-QLSDFGLASWLSTSSSHLT--CTDVAGTFGYLAPEY 506
+ H+D+K N+LL D +L DFG A L +++ C+ Y APE
Sbjct: 176 G---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICSRY-----YRAPEL 227
Query: 507 -FMHGKVSEKIDVYAFGIVLLELLSGK 532
F + IDV++ G VL ELL G+
Sbjct: 228 IFGATDYTSSIDVWSAGCVLAELLLGQ 254
>pdb|3DBQ|A Chain A, Crystal Structure Of Ttk Kinase Domain
Length = 343
Score = 52.4 bits (124), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 54/214 (25%), Positives = 96/214 (44%), Gaps = 27/214 (12%)
Query: 339 VGKGGHSHVYRGCLPDGKEL-AVKILKPSE---DVLKEFASEIEIITAL--HHRNIISLF 392
+G GG S V++ L + K++ A+K + E L + +EI + L H II L+
Sbjct: 17 IGSGGSSKVFQ-VLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLY 75
Query: 393 GFCFEDNNLLLVYDFLSRGSLEENLHGNKKDGNAFGWTERYKVAVGVAEALDYLHNSCEQ 452
+ D + +V + G+++ N KK + W ER + EA+ +H +
Sbjct: 76 DYEITDQYIYMV---MECGNIDLN-SWLKKKKSIDPW-ERKSYWKNMLEAVHTIH---QH 127
Query: 453 PVIHKDVKSSNILLSDDFEPQLSDFGLASWLSTSSSHLTCTDVAGTFGYLAPEYFMHGKV 512
++H D+K +N L+ D +L DFG+A+ + ++ + GT Y+ PE
Sbjct: 128 GIVHSDLKPANFLIVDGM-LKLIDFGIANQMQPDTTSVVKDSQVGTVNYMPPEAIKDMSS 186
Query: 513 SEK-----------IDVYAFGIVLLELLSGKKPI 535
S + DV++ G +L + GK P
Sbjct: 187 SRENGKSKSKISPKSDVWSLGCILYYMTYGKTPF 220
>pdb|3VQU|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With 4- [(4-Amino-5-Cyano-6-Ethoxypyridin-2-
Yl)amino]benzamide
Length = 320
Score = 52.4 bits (124), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 52/212 (24%), Positives = 91/212 (42%), Gaps = 25/212 (11%)
Query: 339 VGKGGHSHVYRGCLPDGKELAVKILKPSE---DVLKEFASEIEIITAL--HHRNIISLFG 393
+G GG S V++ + A+K + E L + +EI + L H II L+
Sbjct: 16 IGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYD 75
Query: 394 FCFEDNNLLLVYDFLSRGSLEENLHGNKKDGNAFGWTERYKVAVGVAEALDYLHNSCEQP 453
+ D +Y + G+++ N KK + W ER + EA+ +H +
Sbjct: 76 YEITDQ---YIYMVMECGNIDLN-SWLKKKKSIDPW-ERKSYWKNMLEAVHTIH---QHG 127
Query: 454 VIHKDVKSSNILLSDDFEPQLSDFGLASWLSTSSSHLTCTDVAGTFGYLAPEYFMHGKVS 513
++H D+K +N L+ D +L DFG+A+ + ++ + GT Y+ PE S
Sbjct: 128 IVHSDLKPANFLIVDGML-KLIDFGIANQMQPDTTSVVKDSQVGTVNYMPPEAIKDMSSS 186
Query: 514 EK-----------IDVYAFGIVLLELLSGKKP 534
+ DV++ G +L + GK P
Sbjct: 187 RENGKSKSKISPKSDVWSLGCILYYMTYGKTP 218
>pdb|3NPC|A Chain A, Crystal Structure Of Jnk2 Complexed With Birb796
pdb|3NPC|B Chain B, Crystal Structure Of Jnk2 Complexed With Birb796
Length = 364
Score = 52.4 bits (124), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 50/188 (26%), Positives = 93/188 (49%), Gaps = 26/188 (13%)
Query: 355 GKELAVKIL-KPSEDVL--KEFASEIEIITALHHRNIISLFGFC--------FEDNNLLL 403
G +AVK L +P ++ K E+ ++ ++H+NIISL F+D L++
Sbjct: 49 GINVAVKKLSRPFQNQTHAKRAYRELVLLKCVNHKNIISLLNVFTPQKTLEEFQDVYLVM 108
Query: 404 VYDFLSRGSLEENLHGNKKDGNAFGWTERYKVAVGVAEALDYLHNSCEQPVIHKDVKSSN 463
L +L + +H + D + Y++ G+ +LH++ +IH+D+K SN
Sbjct: 109 E---LMDANLCQVIH-MELDHERMSYL-LYQMLCGI----KHLHSA---GIIHRDLKPSN 156
Query: 464 ILLSDDFEPQLSDFGLASWLSTSSSHLTCTDVAGTFGYLAPEYFMHGKVSEKIDVYAFGI 523
I++ D ++ DFGLA T+ ++ T T Y APE + + +D+++ G
Sbjct: 157 IVVKSDCTLKILDFGLA---RTACTNFMMTPYVVTRYYRAPEVILGMGYAANVDIWSVGC 213
Query: 524 VLLELLSG 531
++ EL+ G
Sbjct: 214 IMGELVKG 221
>pdb|2BAQ|A Chain A, P38alpha Bound To Ro3201195
Length = 365
Score = 52.4 bits (124), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 49/188 (26%), Positives = 92/188 (48%), Gaps = 24/188 (12%)
Query: 355 GKELAVKIL-KPSEDVL--KEFASEIEIITALHHRNIISLFGFCF------EDNNLLLVY 405
G +AVK L +P + ++ K E+ ++ + H N+I L E N++ LV
Sbjct: 52 GLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVT 111
Query: 406 DFLSRGSLEENLHGNKKDGNAFGWTERYKVAVGVAEALDYLHNSCEQPVIHKDVKSSNIL 465
+ G+ N+ +K + Y++ G L Y+H++ +IH+D+K SN+
Sbjct: 112 HLM--GADLNNIVKCQKLTDDHVQFLIYQILRG----LKYIHSA---DIIHRDLKPSNLA 162
Query: 466 LSDDFEPQLSDFGLASWLSTSSSHLTCTDVAGTFGYLAPEYFMHG-KVSEKIDVYAFGIV 524
+++D E ++ DFGLA T T Y APE ++ ++ +D+++ G +
Sbjct: 163 VNEDXELKILDFGLARHTDDE-----MTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCI 217
Query: 525 LLELLSGK 532
+ ELL+G+
Sbjct: 218 MAELLTGR 225
>pdb|1DI9|A Chain A, The Structure Of P38 Mitogen-Activated Protein Kinase In
Complex With 4-[3-Methylsulfanylanilino]-6,7-
Dimethoxyquinazoline
pdb|1KV1|A Chain A, P38 Map Kinase In Complex With Inhibitor 1
pdb|1KV2|A Chain A, Human P38 Map Kinase In Complex With Birb 796
pdb|1WBO|A Chain A, Fragment Based P38 Inhibitors
pdb|1W7H|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W82|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W83|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W84|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1ZZ2|A Chain A, Two Classes Of P38alpha Map Kinase Inhibitors Having A
Common Diphenylether Core But Exhibiting Divergent
Binding Modes
pdb|1WBN|A Chain A, Fragment Based P38 Inhibitors
pdb|1WBS|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1WBT|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-based Lead Generation.
pdb|1WBV|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1WBW|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1ZYJ|A Chain A, Human P38 Map Kinase In Complex With Inhibitor 1a
pdb|2ZAZ|A Chain A, Crystal Structure Of P38 In Complex With 4-Anilino
Quinoline Inhibitor
pdb|2ZB0|A Chain A, Crystal Structure Of P38 In Complex With Biphenyl Amide
Inhibitor
pdb|2ZB1|A Chain A, Crystal Structure Of P38 In Complex With Biphenyl Amide
Inhibitor
pdb|3HL7|A Chain A, Crystal Structure Of Human P38alpha Complexed With Sd-0006
pdb|3HLL|A Chain A, Crystal Structure Of Human P38alpha Complexed With
Ph-797804
pdb|3HP2|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Pyridinone Compound
pdb|3HP5|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Pyrimidopyridazinone Compound
pdb|3KF7|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Triazolopyrimidine Compound
pdb|3MGY|A Chain A, Mutagenesis Of P38 Map Kinase Eshtablishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3ROC|A Chain A, Crystal Structure Of Human P38 Alpha Complexed With A
Pyrimidinone Compound
pdb|3RIN|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|4E5B|A Chain A, Structure Of P38a Map Kinase Without Bog
pdb|4E6A|A Chain A, P38a-Pia23 Complex
pdb|4E6C|A Chain A, P38a-perifosine Complex
pdb|4E8A|A Chain A, The Crystal Structure Of P38a Map Kinase In Complex With
Pia24
Length = 360
Score = 52.4 bits (124), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 53/205 (25%), Positives = 97/205 (47%), Gaps = 25/205 (12%)
Query: 339 VGKGGHSHVYRGC-LPDGKELAVKIL-KPSEDVL--KEFASEIEIITALHHRNIISLFGF 394
VG G + V G +AVK L +P + ++ K E+ ++ + H N+I L
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 89
Query: 395 CF------EDNNLLLVYDFLSRGSLEENLHGNKKDGNAFGWTERYKVAVGVAEALDYLHN 448
E N++ LV + G+ N+ +K + Y++ G L Y+H+
Sbjct: 90 FTPARSLEEFNDVYLVTHLM--GADLNNIVKCQKLTDDHVQFLIYQILRG----LKYIHS 143
Query: 449 SCEQPVIHKDVKSSNILLSDDFEPQLSDFGLASWLSTSSSHLTCTDVAGTFGYLAPEYFM 508
+ +IH+D+K SN+ +++D E ++ DFGLA T T Y APE +
Sbjct: 144 A---DIIHRDLKPSNLAVNEDCELKILDFGLARHTDDE-----MTGYVATRWYRAPEIML 195
Query: 509 HG-KVSEKIDVYAFGIVLLELLSGK 532
+ ++ +D+++ G ++ ELL+G+
Sbjct: 196 NWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|2BAJ|A Chain A, P38alpha Bound To Pyrazolourea
pdb|2BAK|A Chain A, P38alpha Map Kinase Bound To Mpaq
pdb|4A9Y|A Chain A, P38alpha Map Kinase Bound To Cmpd 8
pdb|4AA0|A Chain A, P38alpha Map Kinase Bound To Cmpd 2
pdb|4AA4|A Chain A, P38alpha Map Kinase Bound To Cmpd 22
pdb|4AAC|A Chain A, P38alpha Map Kinase Bound To Cmpd 29
Length = 365
Score = 52.4 bits (124), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 53/205 (25%), Positives = 97/205 (47%), Gaps = 25/205 (12%)
Query: 339 VGKGGHSHVYRGC-LPDGKELAVKIL-KPSEDVL--KEFASEIEIITALHHRNIISLFGF 394
VG G + V G +AVK L +P + ++ K E+ ++ + H N+I L
Sbjct: 35 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 94
Query: 395 CF------EDNNLLLVYDFLSRGSLEENLHGNKKDGNAFGWTERYKVAVGVAEALDYLHN 448
E N++ LV + G+ N+ +K + Y++ G L Y+H+
Sbjct: 95 FTPARSLEEFNDVYLVTHLM--GADLNNIVKCQKLTDDHVQFLIYQILRG----LKYIHS 148
Query: 449 SCEQPVIHKDVKSSNILLSDDFEPQLSDFGLASWLSTSSSHLTCTDVAGTFGYLAPEYFM 508
+ +IH+D+K SN+ +++D E ++ DFGLA T T Y APE +
Sbjct: 149 A---DIIHRDLKPSNLAVNEDCELKILDFGLARHTDDE-----MTGYVATRWYRAPEIML 200
Query: 509 HG-KVSEKIDVYAFGIVLLELLSGK 532
+ ++ +D+++ G ++ ELL+G+
Sbjct: 201 NWMHYNQTVDIWSVGCIMAELLTGR 225
>pdb|3HRB|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|3MW1|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|2YIS|A Chain A, Triazolopyridine Inhibitors Of P38 Kinase.
pdb|2YIW|A Chain A, Triazolopyridine Inhibitors Of P38 Kinase
Length = 359
Score = 52.4 bits (124), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 53/205 (25%), Positives = 97/205 (47%), Gaps = 25/205 (12%)
Query: 339 VGKGGHSHVYRGC-LPDGKELAVKIL-KPSEDVL--KEFASEIEIITALHHRNIISLFGF 394
VG G + V G +AVK L +P + ++ K E+ ++ + H N+I L
Sbjct: 29 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 88
Query: 395 CF------EDNNLLLVYDFLSRGSLEENLHGNKKDGNAFGWTERYKVAVGVAEALDYLHN 448
E N++ LV + G+ N+ +K + Y++ G L Y+H+
Sbjct: 89 FTPARSLEEFNDVYLVTHLM--GADLNNIVKCQKLTDDHVQFLIYQILRG----LKYIHS 142
Query: 449 SCEQPVIHKDVKSSNILLSDDFEPQLSDFGLASWLSTSSSHLTCTDVAGTFGYLAPEYFM 508
+ +IH+D+K SN+ +++D E ++ DFGLA T T Y APE +
Sbjct: 143 A---DIIHRDLKPSNLAVNEDCELKILDFGLARHTDDE-----MTGYVATRWYRAPEIML 194
Query: 509 HG-KVSEKIDVYAFGIVLLELLSGK 532
+ ++ +D+++ G ++ ELL+G+
Sbjct: 195 NWMHYNQTVDIWSVGCIMAELLTGR 219
>pdb|3E92|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biaryl
Amide Inhibitor
pdb|3E93|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biaryl
Amide Inhibitor
Length = 371
Score = 52.4 bits (124), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 53/205 (25%), Positives = 97/205 (47%), Gaps = 25/205 (12%)
Query: 339 VGKGGHSHVYRGC-LPDGKELAVKIL-KPSEDVL--KEFASEIEIITALHHRNIISLFGF 394
VG G + V G +AVK L +P + ++ K E+ ++ + H N+I L
Sbjct: 41 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 100
Query: 395 CF------EDNNLLLVYDFLSRGSLEENLHGNKKDGNAFGWTERYKVAVGVAEALDYLHN 448
E N++ LV + G+ N+ +K + Y++ G L Y+H+
Sbjct: 101 FTPARSLEEFNDVYLVTHLM--GADLNNIVKCQKLTDDHVQFLIYQILRG----LKYIHS 154
Query: 449 SCEQPVIHKDVKSSNILLSDDFEPQLSDFGLASWLSTSSSHLTCTDVAGTFGYLAPEYFM 508
+ +IH+D+K SN+ +++D E ++ DFGLA T T Y APE +
Sbjct: 155 A---DIIHRDLKPSNLAVNEDXELKILDFGLARHTDDE-----MTGYVATRWYRAPEIML 206
Query: 509 HG-KVSEKIDVYAFGIVLLELLSGK 532
+ ++ +D+++ G ++ ELL+G+
Sbjct: 207 NWMHYNQTVDIWSVGCIMAELLTGR 231
>pdb|3UC3|A Chain A, The Crystal Structure Of Snf1-Related Kinase 2.3
Length = 361
Score = 52.4 bits (124), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 56/215 (26%), Positives = 92/215 (42%), Gaps = 17/215 (7%)
Query: 332 NFLPEYLVGKGGHSHVYRGCLPDGKEL-AVKILKPSEDVLKEFASEIEIITALHHRNIIS 390
+F+ + G G + + R L KEL AVK ++ + + EI +L H NI+
Sbjct: 23 DFVKDIGSGNFGVARLMRDKL--TKELVAVKYIERGAAIDENVQREIINHRSLRHPNIVR 80
Query: 391 LFGFCFEDNNLLLVYDFLSRGSLEENLHGNKKDGNAFGWTERYKVAVGVAEALDYLHNSC 450
+L ++ ++ S G L E + + F E + + Y H+
Sbjct: 81 FKEVILTPTHLAIIMEYASGGELYERI----CNAGRFSEDEARFFFQQLLSGVSYCHS-- 134
Query: 451 EQPVIHKDVKSSNILLSDDFEPQLS--DFGLASWLSTSSSHLTCTDVAGTFGYLAPEYFM 508
+ H+D+K N LL P+L DFG + +S H GT Y+APE +
Sbjct: 135 -MQICHRDLKLENTLLDGSPAPRLKICDFG---YSKSSVLHSQPKSTVGTPAYIAPEVLL 190
Query: 509 HGKVSEKI-DVYAFGIVLLELLSGKKPI-NSENPK 541
+ KI DV++ G+ L +L G P + E P+
Sbjct: 191 RQEYDGKIADVWSCGVTLYVMLVGAYPFEDPEEPR 225
>pdb|1PYX|A Chain A, Gsk-3 Beta Complexed With Amp-Pnp
pdb|1PYX|B Chain B, Gsk-3 Beta Complexed With Amp-Pnp
pdb|3DU8|A Chain A, Crystal Structure Of Gsk-3 Beta In Complex With
Nms-869553a
pdb|3DU8|B Chain B, Crystal Structure Of Gsk-3 Beta In Complex With
Nms-869553a
Length = 422
Score = 52.4 bits (124), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 61/207 (29%), Positives = 94/207 (45%), Gaps = 25/207 (12%)
Query: 338 LVGKGGHSHVYRGCLPDGKELAVKILKPSEDVLKEFAS-EIEIITALHHRNIISLFGFCF 396
++G G VY+ L D EL V I K +D K F + E++I+ L H NI+ L F +
Sbjct: 63 VIGNGSFGVVYQAKLCDSGEL-VAIKKVLQD--KRFKNRELQIMRKLDHCNIVRLRYFFY 119
Query: 397 EDNN------LLLVYDFLSRGSLEENLHGNK-KDGNAFGWTERYKVAVGVAEALDYLHNS 449
L LV D++ H ++ K + + Y + +L Y+H+
Sbjct: 120 SSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQL--FRSLAYIHSF 177
Query: 450 CEQPVIHKDVKSSNILLSDDFEP-QLSDFGLASWLSTSSSHLT--CTDVAGTFGYLAPEY 506
+ H+D+K N+LL D +L DFG A L +++ C+ Y APE
Sbjct: 178 G---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICSRY-----YRAPEL 229
Query: 507 -FMHGKVSEKIDVYAFGIVLLELLSGK 532
F + IDV++ G VL ELL G+
Sbjct: 230 IFGATDYTSSIDVWSAGCVLAELLLGQ 256
>pdb|3OEF|X Chain X, Crystal Structure Of Y323f Inactive Mutant Of P38alpha Map
Kinase
Length = 360
Score = 52.4 bits (124), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 53/205 (25%), Positives = 97/205 (47%), Gaps = 25/205 (12%)
Query: 339 VGKGGHSHVYRGC-LPDGKELAVKIL-KPSEDVL--KEFASEIEIITALHHRNIISLFGF 394
VG G + V G +AVK L +P + ++ K E+ ++ + H N+I L
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 89
Query: 395 CF------EDNNLLLVYDFLSRGSLEENLHGNKKDGNAFGWTERYKVAVGVAEALDYLHN 448
E N++ LV + G+ N+ +K + Y++ G L Y+H+
Sbjct: 90 FTPARSLEEFNDVYLVTHLM--GADLNNIVKCQKLTDDHVQFLIYQILRG----LKYIHS 143
Query: 449 SCEQPVIHKDVKSSNILLSDDFEPQLSDFGLASWLSTSSSHLTCTDVAGTFGYLAPEYFM 508
+ +IH+D+K SN+ +++D E ++ DFGLA T T Y APE +
Sbjct: 144 A---DIIHRDLKPSNLAVNEDCELKILDFGLARHTDDE-----MTGYVATRWYRAPEIML 195
Query: 509 HG-KVSEKIDVYAFGIVLLELLSGK 532
+ ++ +D+++ G ++ ELL+G+
Sbjct: 196 NWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|1OZ1|A Chain A, P38 Mitogen-Activated Kinase In Complex With 4-Azaindole
Inhibitor
Length = 372
Score = 52.4 bits (124), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 53/205 (25%), Positives = 97/205 (47%), Gaps = 25/205 (12%)
Query: 339 VGKGGHSHVYRGC-LPDGKELAVKIL-KPSEDVL--KEFASEIEIITALHHRNIISLFGF 394
VG G + V G +AVK L +P + ++ K E+ ++ + H N+I L
Sbjct: 42 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 101
Query: 395 CF------EDNNLLLVYDFLSRGSLEENLHGNKKDGNAFGWTERYKVAVGVAEALDYLHN 448
E N++ LV + G+ N+ +K + Y++ G L Y+H+
Sbjct: 102 FTPARSLEEFNDVYLVTHLM--GADLNNIVKCQKLTDDHVQFLIYQILRG----LKYIHS 155
Query: 449 SCEQPVIHKDVKSSNILLSDDFEPQLSDFGLASWLSTSSSHLTCTDVAGTFGYLAPEYFM 508
+ +IH+D+K SN+ +++D E ++ DFGLA T T Y APE +
Sbjct: 156 A---DIIHRDLKPSNLAVNEDCELKILDFGLARHTDDE-----MTGYVATRWYRAPEIML 207
Query: 509 HG-KVSEKIDVYAFGIVLLELLSGK 532
+ ++ +D+++ G ++ ELL+G+
Sbjct: 208 NWMHYNQTVDIWSVGCIMAELLTGR 232
>pdb|3NNX|A Chain A, Crystal Structure Of Phosphorylated P38 Alpha In Complex
With Dp802
Length = 354
Score = 52.4 bits (124), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 55/221 (24%), Positives = 103/221 (46%), Gaps = 25/221 (11%)
Query: 339 VGKGGHSHVYRGC-LPDGKELAVKIL-KPSEDVL--KEFASEIEIITALHHRNIISLFGF 394
VG G + V G +AVK L +P + ++ K E+ ++ + H N+I L
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 89
Query: 395 CF------EDNNLLLVYDFLSRGSLEENLHGNKKDGNAFGWTERYKVAVGVAEALDYLHN 448
E N++ LV + G+ N+ +K + Y++ G L Y+H+
Sbjct: 90 FTPARSLEEFNDVYLVTHLM--GADLNNIVKCQKLTDDHVQFLIYQILRG----LKYIHS 143
Query: 449 SCEQPVIHKDVKSSNILLSDDFEPQLSDFGLASWLSTSSSHLTCTDVAGTFGYLAPEYFM 508
+ +IH+D+K SN+ +++D E ++ DFGLA + T T Y APE +
Sbjct: 144 A---DIIHRDLKPSNLAVNEDCELKILDFGLA-----RHTDDEMTGXVATRWYRAPEIML 195
Query: 509 HG-KVSEKIDVYAFGIVLLELLSGKKPINSENPKGQESLVM 548
+ ++ +D+++ G ++ ELL+G+ + Q L++
Sbjct: 196 NWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLIL 236
>pdb|2GFS|A Chain A, P38 Kinase Crystal Structure In Complex With Ro3201195
pdb|3FKL|A Chain A, P38 Kinase Crystal Structure In Complex With Ro9552
pdb|3FKN|A Chain A, P38 Kinase Crystal Structure In Complex With Ro7125
pdb|3FL4|A Chain A, P38 Kinase Crystal Structure In Complex With Ro5634
pdb|3FLQ|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-((S)-2-Methanesulfonyl-1-Methyl-
Ethylamino)-8-Methyl-8h-Pyrido[2,3-D]pyrimidin
pdb|3FLS|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-((R)-2-Methanesulfonyl-1-Methyl-
Ethylamino)-8-Methyl-8h-Pyrido[2,3-D]pyrimidin-7-One
pdb|3FLW|A Chain A, P38 Kinase Crystal Structure In Complex With Pamapimod
pdb|3FLY|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-Isopropylamino-8-Methyl-8h-Pyrido[2,
3- D]pyrimidin-7-One
pdb|3FLZ|A Chain A, P38 Kinase Crystal Structure In Complex With
8-Methyl-6-Phenoxy-2-
(Tetrahydro-Pyran-4-Ylamino)-8h-Pyrido[2,
3-D]pyrimidin-7-One
pdb|3FMH|A Chain A, P38 Kinase Crystal Structure In Complex With
6-(2,4-Difluoro-Phenoxy)-
8-Methyl-2-((R)-1-Methyl-2-Tetrazol-2-Yl-Ethylamino)-8h-
Pyrido[2,3- D]pyrimidin-7-One
pdb|3FMJ|A Chain A, P38 Kinase Crystal Structure In Complex With
4-(5-Methyl-3-Phenyl- Isoxazol-4-Yl)-Pyrimidin-2-Ylamine
pdb|3FMK|A Chain A, P38 Kinase Crystal Structure In Complex With
6-(2,4-Difluoro-Phenoxy)-
8-Methyl-2-((S)-1-Methyl-2-Tetrazol-2-Yl-Ethylamino)-8h-
Pyrido[2,3- D]pyrimidin-7-One
pdb|3FML|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6224
pdb|3FMM|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6226
pdb|3FMN|A Chain A, P38 Kinase Crystal Structure In Complex With Ro2530
pdb|3FSF|A Chain A, P38 Kinase Crystal Structure In Complex With 3-(2,6-
Dichloro-Phenyl)-7-[4-(2-Diethylamino-Ethoxy)-
Phenylamino]-
1-Methyl-3,4-Dihydro-1h-Pyrimido[4,5-D]pyrimidin-2-One
pdb|3FSK|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6257
Length = 372
Score = 52.4 bits (124), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 53/205 (25%), Positives = 97/205 (47%), Gaps = 25/205 (12%)
Query: 339 VGKGGHSHVYRGC-LPDGKELAVKIL-KPSEDVL--KEFASEIEIITALHHRNIISLFGF 394
VG G + V G +AVK L +P + ++ K E+ ++ + H N+I L
Sbjct: 42 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 101
Query: 395 CF------EDNNLLLVYDFLSRGSLEENLHGNKKDGNAFGWTERYKVAVGVAEALDYLHN 448
E N++ LV + G+ N+ +K + Y++ G L Y+H+
Sbjct: 102 FTPARSLEEFNDVYLVTHLM--GADLNNIVKCQKLTDDHVQFLIYQILRG----LKYIHS 155
Query: 449 SCEQPVIHKDVKSSNILLSDDFEPQLSDFGLASWLSTSSSHLTCTDVAGTFGYLAPEYFM 508
+ +IH+D+K SN+ +++D E ++ DFGLA T T Y APE +
Sbjct: 156 A---DIIHRDLKPSNLAVNEDCELKILDFGLARHTDDE-----MTGYVATRWYRAPEIML 207
Query: 509 HG-KVSEKIDVYAFGIVLLELLSGK 532
+ ++ +D+++ G ++ ELL+G+
Sbjct: 208 NWMHYNQTVDIWSVGCIMAELLTGR 232
>pdb|1Q5K|A Chain A, Crystal Structure Of Glycogen Synthase Kinase 3 In
Complexed With Inhibitor
pdb|1Q5K|B Chain B, Crystal Structure Of Glycogen Synthase Kinase 3 In
Complexed With Inhibitor
pdb|3I4B|A Chain A, Crystal Structure Of Gsk3b In Complex With A
Pyrimidylpyrrole Inhibitor
pdb|3I4B|B Chain B, Crystal Structure Of Gsk3b In Complex With A
Pyrimidylpyrrole Inhibitor
pdb|3L1S|A Chain A, 3-Aryl-4-(Arylhydrazono)-1h-Pyrazol-5-Ones: Highly Ligand
Efficient And Potent Inhibitors Of Gsk3
pdb|3L1S|B Chain B, 3-Aryl-4-(Arylhydrazono)-1h-Pyrazol-5-Ones: Highly Ligand
Efficient And Potent Inhibitors Of Gsk3
Length = 414
Score = 52.4 bits (124), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 61/207 (29%), Positives = 94/207 (45%), Gaps = 25/207 (12%)
Query: 338 LVGKGGHSHVYRGCLPDGKELAVKILKPSEDVLKEFAS-EIEIITALHHRNIISLFGFCF 396
++G G VY+ L D EL V I K +D K F + E++I+ L H NI+ L F +
Sbjct: 55 VIGNGSFGVVYQAKLCDSGEL-VAIKKVLQD--KRFKNRELQIMRKLDHCNIVRLRYFFY 111
Query: 397 EDNN------LLLVYDFLSRGSLEENLHGNK-KDGNAFGWTERYKVAVGVAEALDYLHNS 449
L LV D++ H ++ K + + Y + +L Y+H+
Sbjct: 112 SSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQL--FRSLAYIHSF 169
Query: 450 CEQPVIHKDVKSSNILLSDDFEP-QLSDFGLASWLSTSSSHLT--CTDVAGTFGYLAPEY 506
+ H+D+K N+LL D +L DFG A L +++ C+ Y APE
Sbjct: 170 G---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICSRY-----YRAPEL 221
Query: 507 -FMHGKVSEKIDVYAFGIVLLELLSGK 532
F + IDV++ G VL ELL G+
Sbjct: 222 IFGATDYTSSIDVWSAGCVLAELLLGQ 248
>pdb|3ENM|A Chain A, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|B Chain B, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|C Chain C, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|D Chain D, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
Length = 316
Score = 52.4 bits (124), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 42/142 (29%), Positives = 67/142 (47%), Gaps = 22/142 (15%)
Query: 434 KVAVGVAEALDYLHNSCEQPVIHKDVKSSNILLSDDFEPQLSDFGLASWLSTSSSHLTCT 493
K+AV + +AL++LH+ VIH+DVK SN+L++ + + DFG++ +L
Sbjct: 140 KIAVSIVKALEHLHSKLS--VIHRDVKPSNVLINALGQVKXCDFGISGYLVDD----VAK 193
Query: 494 DV-AGTFGYLAPEY----FMHGKVSEKIDVYAFGIVLLELLSGKKPINSENPKGQESLVM 548
D+ AG Y APE S K D+++ GI +EL + P +S
Sbjct: 194 DIDAGCKPYXAPERINPELNQKGYSVKSDIWSLGITXIELAILRFPYDS----------- 242
Query: 549 WAKPILKDGKVSQLLDPSLDTD 570
W P + +V + P L D
Sbjct: 243 WGTPFQQLKQVVEEPSPQLPAD 264
>pdb|3HVC|A Chain A, Crystal Structure Of Human P38alpha Map Kinase
Length = 362
Score = 52.4 bits (124), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 53/205 (25%), Positives = 97/205 (47%), Gaps = 25/205 (12%)
Query: 339 VGKGGHSHVYRGC-LPDGKELAVKIL-KPSEDVL--KEFASEIEIITALHHRNIISLFGF 394
VG G + V G +AVK L +P + ++ K E+ ++ + H N+I L
Sbjct: 32 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 91
Query: 395 CF------EDNNLLLVYDFLSRGSLEENLHGNKKDGNAFGWTERYKVAVGVAEALDYLHN 448
E N++ LV + G+ N+ +K + Y++ G L Y+H+
Sbjct: 92 FTPARSLEEFNDVYLVTHLM--GADLNNIVKCQKLTDDHVQFLIYQILRG----LKYIHS 145
Query: 449 SCEQPVIHKDVKSSNILLSDDFEPQLSDFGLASWLSTSSSHLTCTDVAGTFGYLAPEYFM 508
+ +IH+D+K SN+ +++D E ++ DFGLA T T Y APE +
Sbjct: 146 A---DIIHRDLKPSNLAVNEDCELKILDFGLARHTDDE-----MTGYVATRWYRAPEIML 197
Query: 509 HG-KVSEKIDVYAFGIVLLELLSGK 532
+ ++ +D+++ G ++ ELL+G+
Sbjct: 198 NWMHYNQTVDIWSVGCIMAELLTGR 222
>pdb|2NPQ|A Chain A, A Novel Lipid Binding Site In The P38 Alpha Map Kinase
Length = 367
Score = 52.4 bits (124), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 53/205 (25%), Positives = 97/205 (47%), Gaps = 25/205 (12%)
Query: 339 VGKGGHSHVYRGC-LPDGKELAVKIL-KPSEDVL--KEFASEIEIITALHHRNIISLFGF 394
VG G + V G +AVK L +P + ++ K E+ ++ + H N+I L
Sbjct: 37 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 96
Query: 395 CF------EDNNLLLVYDFLSRGSLEENLHGNKKDGNAFGWTERYKVAVGVAEALDYLHN 448
E N++ LV + G+ N+ +K + Y++ G L Y+H+
Sbjct: 97 FTPARSLEEFNDVYLVTHLM--GADLNNIVKCQKLTDDHVQFLIYQILRG----LKYIHS 150
Query: 449 SCEQPVIHKDVKSSNILLSDDFEPQLSDFGLASWLSTSSSHLTCTDVAGTFGYLAPEYFM 508
+ +IH+D+K SN+ +++D E ++ DFGLA T T Y APE +
Sbjct: 151 A---DIIHRDLKPSNLAVNEDCELKILDFGLARHTDDE-----MTGYVATRWYRAPEIML 202
Query: 509 HG-KVSEKIDVYAFGIVLLELLSGK 532
+ ++ +D+++ G ++ ELL+G+
Sbjct: 203 NWMHYNQTVDIWSVGCIMAELLTGR 227
>pdb|4BCF|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 331
Score = 52.4 bits (124), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 46/176 (26%), Positives = 84/176 (47%), Gaps = 21/176 (11%)
Query: 376 EIEIITALHHRNIISLFGFCFEDNN--------LLLVYDFLSRGSLEENLHGNKKDGNA- 426
EI+I+ L H N+++L C + + LV+DF E +L G +
Sbjct: 67 EIKILQLLKHENVVNLIEICRTKASPYNRCKASIYLVFDFC-----EHDLAGLLSNVLVK 121
Query: 427 FGWTERYKVAVGVAEALDYLHNSCEQPVIHKDVKSSNILLSDDFEPQLSDFGLASW--LS 484
F +E +V + L Y+H + ++H+D+K++N+L++ D +L+DFGLA L+
Sbjct: 122 FTLSEIKRVMQMLLNGLYYIHRN---KILHRDMKAANVLITRDGVLKLADFGLARAFSLA 178
Query: 485 TSSSHLTCTDVAGTFGYLAPEYFMHGK-VSEKIDVYAFGIVLLELLSGKKPINSEN 539
+S + T Y PE + + ID++ G ++ E+ + + PI N
Sbjct: 179 KNSQPNRYXNRVVTLWYRPPELLLGERDYGPPIDLWGAGCIMAEMWT-RSPIMQGN 233
>pdb|3ZSG|A Chain A, X-Ray Structure Of P38alpha Bound To Tak-715
pdb|3ZSH|A Chain A, X-Ray Structure Of P38alpha Bound To Scio-469
pdb|3ZSI|A Chain A, X-Ray Structure Of P38alpha Bound To Vx-745
pdb|3ZS5|A Chain A, Structural Basis For Kinase Selectivity Of Three Clinical
P38alpha Inhibitors
Length = 362
Score = 52.4 bits (124), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 53/205 (25%), Positives = 97/205 (47%), Gaps = 25/205 (12%)
Query: 339 VGKGGHSHVYRGC-LPDGKELAVKIL-KPSEDVL--KEFASEIEIITALHHRNIISLFGF 394
VG G + V G +AVK L +P + ++ K E+ ++ + H N+I L
Sbjct: 32 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 91
Query: 395 CF------EDNNLLLVYDFLSRGSLEENLHGNKKDGNAFGWTERYKVAVGVAEALDYLHN 448
E N++ LV + G+ N+ +K + Y++ G L Y+H+
Sbjct: 92 FTPARSLEEFNDVYLVTHLM--GADLNNIVKCQKLTDDHVQFLIYQILRG----LKYIHS 145
Query: 449 SCEQPVIHKDVKSSNILLSDDFEPQLSDFGLASWLSTSSSHLTCTDVAGTFGYLAPEYFM 508
+ +IH+D+K SN+ +++D E ++ DFGLA T T Y APE +
Sbjct: 146 A---DIIHRDLKPSNLAVNEDCELKILDFGLARHTDDE-----MTGYVATRWYRAPEIML 197
Query: 509 HG-KVSEKIDVYAFGIVLLELLSGK 532
+ ++ +D+++ G ++ ELL+G+
Sbjct: 198 NWMHYNQTVDIWSVGCIMAELLTGR 222
>pdb|1Q3D|A Chain A, Gsk-3 Beta Complexed With Staurosporine
pdb|1Q3D|B Chain B, Gsk-3 Beta Complexed With Staurosporine
pdb|1Q3W|A Chain A, Gsk-3 Beta Complexed With Alsterpaullone
pdb|1Q3W|B Chain B, Gsk-3 Beta Complexed With Alsterpaullone
pdb|1Q41|A Chain A, Gsk-3 Beta Complexed With Indirubin-3'-Monoxime
pdb|1Q41|B Chain B, Gsk-3 Beta Complexed With Indirubin-3'-Monoxime
pdb|1Q4L|A Chain A, Gsk-3 Beta Complexed With Inhibitor I-5
pdb|1Q4L|B Chain B, Gsk-3 Beta Complexed With Inhibitor I-5
pdb|3Q3B|A Chain A, 6-Amino-4-(Pyrimidin-4-Yl)pyridones: Novel Glycogen
Synthase Kinase-3 Inhibitors
pdb|3Q3B|B Chain B, 6-Amino-4-(Pyrimidin-4-Yl)pyridones: Novel Glycogen
Synthase Kinase-3 Inhibitors
Length = 424
Score = 52.4 bits (124), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 61/207 (29%), Positives = 94/207 (45%), Gaps = 25/207 (12%)
Query: 338 LVGKGGHSHVYRGCLPDGKELAVKILKPSEDVLKEFAS-EIEIITALHHRNIISLFGFCF 396
++G G VY+ L D EL V I K +D K F + E++I+ L H NI+ L F +
Sbjct: 65 VIGNGSFGVVYQAKLCDSGEL-VAIKKVLQD--KRFKNRELQIMRKLDHCNIVRLRYFFY 121
Query: 397 EDNN------LLLVYDFLSRGSLEENLHGNK-KDGNAFGWTERYKVAVGVAEALDYLHNS 449
L LV D++ H ++ K + + Y + +L Y+H+
Sbjct: 122 SSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQL--FRSLAYIHSF 179
Query: 450 CEQPVIHKDVKSSNILLSDDFEP-QLSDFGLASWLSTSSSHLT--CTDVAGTFGYLAPEY 506
+ H+D+K N+LL D +L DFG A L +++ C+ Y APE
Sbjct: 180 G---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICSRY-----YRAPEL 231
Query: 507 -FMHGKVSEKIDVYAFGIVLLELLSGK 532
F + IDV++ G VL ELL G+
Sbjct: 232 IFGATDYTSSIDVWSAGCVLAELLLGQ 258
>pdb|2LGC|A Chain A, Joint Nmr And X-Ray Refinement Reveals The Structure Of A
Novel Dibenzo[a,D]cycloheptenone InhibitorP38 MAP KINASE
COMPLEX IN Solution
Length = 359
Score = 52.4 bits (124), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 55/221 (24%), Positives = 102/221 (46%), Gaps = 25/221 (11%)
Query: 339 VGKGGHSHVYRGC-LPDGKELAVKIL-KPSEDVL--KEFASEIEIITALHHRNIISLFGF 394
VG G + V G +AVK L +P + ++ K E+ ++ + H N+I L
Sbjct: 35 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 94
Query: 395 CF------EDNNLLLVYDFLSRGSLEENLHGNKKDGNAFGWTERYKVAVGVAEALDYLHN 448
E N++ LV + G+ N+ +K + Y++ G L Y+H+
Sbjct: 95 FTPARSLEEFNDVYLVTHLM--GADLNNIVKCQKLTDDHVQFLIYQILRG----LKYIHS 148
Query: 449 SCEQPVIHKDVKSSNILLSDDFEPQLSDFGLASWLSTSSSHLTCTDVAGTFGYLAPEYFM 508
+ +IH+D+K SN+ +++D E ++ DFGLA T T Y APE +
Sbjct: 149 A---DIIHRDLKPSNLAVNEDCELKILDFGLARHTDDE-----MTGYVATRWYRAPEIML 200
Query: 509 HG-KVSEKIDVYAFGIVLLELLSGKKPINSENPKGQESLVM 548
+ ++ +D+++ G ++ ELL+G+ + Q L++
Sbjct: 201 NWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLIL 241
>pdb|3K3J|A Chain A, P38alpha Bound To Novel Dfg-Out Compound Pf-00416121
Length = 362
Score = 52.4 bits (124), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 53/205 (25%), Positives = 97/205 (47%), Gaps = 25/205 (12%)
Query: 339 VGKGGHSHVYRGC-LPDGKELAVKIL-KPSEDVL--KEFASEIEIITALHHRNIISLFGF 394
VG G + V G +AVK L +P + ++ K E+ ++ + H N+I L
Sbjct: 32 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 91
Query: 395 CF------EDNNLLLVYDFLSRGSLEENLHGNKKDGNAFGWTERYKVAVGVAEALDYLHN 448
E N++ LV + G+ N+ +K + Y++ G L Y+H+
Sbjct: 92 FTPARSLEEFNDVYLVTHLM--GADLNNIVKCQKLTDDHVQFLIYQILRG----LKYIHS 145
Query: 449 SCEQPVIHKDVKSSNILLSDDFEPQLSDFGLASWLSTSSSHLTCTDVAGTFGYLAPEYFM 508
+ +IH+D+K SN+ +++D E ++ DFGLA T T Y APE +
Sbjct: 146 A---DIIHRDLKPSNLAVNEDCELKILDFGLARHTDDE-----MTGYVATRWYRAPEIML 197
Query: 509 HG-KVSEKIDVYAFGIVLLELLSGK 532
+ ++ +D+++ G ++ ELL+G+
Sbjct: 198 NWMHYNQTVDIWSVGCIMAELLTGR 222
>pdb|3GCU|A Chain A, Human P38 Map Kinase In Complex With Rl48
pdb|3GCU|B Chain B, Human P38 Map Kinase In Complex With Rl48
pdb|3HV4|A Chain A, Human P38 Map Kinase In Complex With Rl51
pdb|3HV4|B Chain B, Human P38 Map Kinase In Complex With Rl51
pdb|3HV5|A Chain A, Human P38 Map Kinase In Complex With Rl24
pdb|3HV5|B Chain B, Human P38 Map Kinase In Complex With Rl24
pdb|3HV6|A Chain A, Human P38 Map Kinase In Complex With Rl39
pdb|3HV7|A Chain A, Human P38 Map Kinase In Complex With Rl38
pdb|3HUC|A Chain A, Human P38 Map Kinase In Complex With Rl40
pdb|3LFA|A Chain A, Human P38 Map Kinase In Complex With Dasatinib
pdb|3QUE|A Chain A, Human P38 Map Kinase In Complex With Skepinone-L
pdb|3QUD|A Chain A, Human P38 Map Kinase In Complex With
2-Amino-Phenylamino-Benzophenone
pdb|3UVP|A Chain A, Human P38 Map Kinase In Complex With A Benzamide
Substituted Benzosuberone
pdb|3UVQ|A Chain A, Human P38 Map Kinase In Complex With A Dibenzosuberone
Derivative
pdb|4EH2|A Chain A, Human P38 Map Kinase In Complex With Np-F1 And Rl87
pdb|4EH3|A Chain A, Human P38 Map Kinase In Complex With Np-F2 And Rl87
pdb|4EH4|A Chain A, Human P38 Map Kinase In Complex With Np-F3 And Rl87
pdb|4EH5|A Chain A, Human P38 Map Kinase In Complex With Np-F4 And Rl87
pdb|4EH6|A Chain A, Human P38 Map Kinase In Complex With Np-F5 And Rl87
pdb|4EH7|A Chain A, Human P38 Map Kinase In Complex With Np-F6 And Rl87
pdb|4EH8|A Chain A, Human P38 Map Kinase In Complex With Np-F7 And Rl87
pdb|4EH9|A Chain A, Human P38 Map Kinase In Complex With Np-F11 And Rl87
pdb|4EHV|A Chain A, Human P38 Map Kinase In Complex With Np-F10 And Rl87
pdb|3UVR|A Chain A, Human P38 Map Kinase In Complex With Km064
pdb|4DLI|A Chain A, Human P38 Map Kinase In Complex With Rl87
pdb|4DLJ|A Chain A, Human P38 Map Kinase In Complex With Rl163
Length = 360
Score = 52.4 bits (124), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 53/205 (25%), Positives = 97/205 (47%), Gaps = 25/205 (12%)
Query: 339 VGKGGHSHVYRGC-LPDGKELAVKIL-KPSEDVL--KEFASEIEIITALHHRNIISLFGF 394
VG G + V G +AVK L +P + ++ K E+ ++ + H N+I L
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 89
Query: 395 CF------EDNNLLLVYDFLSRGSLEENLHGNKKDGNAFGWTERYKVAVGVAEALDYLHN 448
E N++ LV + G+ N+ +K + Y++ G L Y+H+
Sbjct: 90 FTPARSLEEFNDVYLVTHLM--GADLNNIVKCQKLTDDHVQFLIYQILRG----LKYIHS 143
Query: 449 SCEQPVIHKDVKSSNILLSDDFEPQLSDFGLASWLSTSSSHLTCTDVAGTFGYLAPEYFM 508
+ +IH+D+K SN+ +++D E ++ DFGLA T T Y APE +
Sbjct: 144 A---DIIHRDLKPSNLAVNEDCELKILDFGLARHTDDE-----MTGYVATRWYRAPEIML 195
Query: 509 HG-KVSEKIDVYAFGIVLLELLSGK 532
+ ++ +D+++ G ++ ELL+G+
Sbjct: 196 NWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|1R0E|A Chain A, Glycogen Synthase Kinase-3 Beta In Complex With
3-Indolyl-4- Arylmaleimide Inhibitor
pdb|1R0E|B Chain B, Glycogen Synthase Kinase-3 Beta In Complex With
3-Indolyl-4- Arylmaleimide Inhibitor
Length = 391
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 61/207 (29%), Positives = 94/207 (45%), Gaps = 25/207 (12%)
Query: 338 LVGKGGHSHVYRGCLPDGKELAVKILKPSEDVLKEFAS-EIEIITALHHRNIISLFGFCF 396
++G G VY+ L D EL V I K +D K F + E++I+ L H NI+ L F +
Sbjct: 32 VIGNGSFGVVYQAKLCDSGEL-VAIKKVLQD--KRFKNRELQIMRKLDHCNIVRLRYFFY 88
Query: 397 EDNN------LLLVYDFLSRGSLEENLHGNK-KDGNAFGWTERYKVAVGVAEALDYLHNS 449
L LV D++ H ++ K + + Y + +L Y+H+
Sbjct: 89 SSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQL--FRSLAYIHSF 146
Query: 450 CEQPVIHKDVKSSNILLSDDFEP-QLSDFGLASWLSTSSSHLT--CTDVAGTFGYLAPEY 506
+ H+D+K N+LL D +L DFG A L +++ C+ Y APE
Sbjct: 147 G---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICSRY-----YRAPEL 198
Query: 507 -FMHGKVSEKIDVYAFGIVLLELLSGK 532
F + IDV++ G VL ELL G+
Sbjct: 199 IFGATDYTSSIDVWSAGCVLAELLLGQ 225
>pdb|3NNU|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp1376
pdb|3NNV|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp437
pdb|3NNW|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp802
Length = 354
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 55/221 (24%), Positives = 102/221 (46%), Gaps = 25/221 (11%)
Query: 339 VGKGGHSHVYRGC-LPDGKELAVKIL-KPSEDVL--KEFASEIEIITALHHRNIISLFGF 394
VG G + V G +AVK L +P + ++ K E+ ++ + H N+I L
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 89
Query: 395 CF------EDNNLLLVYDFLSRGSLEENLHGNKKDGNAFGWTERYKVAVGVAEALDYLHN 448
E N++ LV + G+ N+ +K + Y++ G L Y+H+
Sbjct: 90 FTPARSLEEFNDVYLVTHLM--GADLNNIVKCQKLTDDHVQFLIYQILRG----LKYIHS 143
Query: 449 SCEQPVIHKDVKSSNILLSDDFEPQLSDFGLASWLSTSSSHLTCTDVAGTFGYLAPEYFM 508
+ +IH+D+K SN+ +++D E ++ DFGLA T T Y APE +
Sbjct: 144 A---DIIHRDLKPSNLAVNEDCELKILDFGLARHTDDE-----MTGYVATRWYRAPEIML 195
Query: 509 HG-KVSEKIDVYAFGIVLLELLSGKKPINSENPKGQESLVM 548
+ ++ +D+++ G ++ ELL+G+ + Q L++
Sbjct: 196 NWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLIL 236
>pdb|3MPT|A Chain A, Crystal Structure Of P38 Kinase In Complex With A
Pyrrole-2- Carboxamide Inhibitor
Length = 371
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 53/205 (25%), Positives = 97/205 (47%), Gaps = 25/205 (12%)
Query: 339 VGKGGHSHVYRGC-LPDGKELAVKIL-KPSEDVL--KEFASEIEIITALHHRNIISLFGF 394
VG G + V G +AVK L +P + ++ K E+ ++ + H N+I L
Sbjct: 41 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 100
Query: 395 CF------EDNNLLLVYDFLSRGSLEENLHGNKKDGNAFGWTERYKVAVGVAEALDYLHN 448
E N++ LV + G+ N+ +K + Y++ G L Y+H+
Sbjct: 101 FTPARSLEEFNDVYLVTHLM--GADLNNIVKCQKLTDDHVQFLIYQILRG----LKYIHS 154
Query: 449 SCEQPVIHKDVKSSNILLSDDFEPQLSDFGLASWLSTSSSHLTCTDVAGTFGYLAPEYFM 508
+ +IH+D+K SN+ +++D E ++ DFGLA T T Y APE +
Sbjct: 155 A---DIIHRDLKPSNLAVNEDCELKILDFGLARHTDDE-----MTGYVATRWYRAPEIML 206
Query: 509 HG-KVSEKIDVYAFGIVLLELLSGK 532
+ ++ +D+++ G ++ ELL+G+
Sbjct: 207 NWMHYNQTVDIWSVGCIMAELLTGR 231
>pdb|1ZZL|A Chain A, Crystal Structure Of P38 With Triazolopyridine
pdb|2YIX|A Chain A, Triazolopyridine Inhibitors Of P38
Length = 351
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 55/221 (24%), Positives = 102/221 (46%), Gaps = 25/221 (11%)
Query: 339 VGKGGHSHVYRGC-LPDGKELAVKIL-KPSEDVL--KEFASEIEIITALHHRNIISLFGF 394
VG G + V G +AVK L +P + ++ K E+ ++ + H N+I L
Sbjct: 27 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 86
Query: 395 CF------EDNNLLLVYDFLSRGSLEENLHGNKKDGNAFGWTERYKVAVGVAEALDYLHN 448
E N++ LV + G+ N+ +K + Y++ G L Y+H+
Sbjct: 87 FTPARSLEEFNDVYLVTHLM--GADLNNIVKCQKLTDDHVQFLIYQILRG----LKYIHS 140
Query: 449 SCEQPVIHKDVKSSNILLSDDFEPQLSDFGLASWLSTSSSHLTCTDVAGTFGYLAPEYFM 508
+ +IH+D+K SN+ +++D E ++ DFGLA T T Y APE +
Sbjct: 141 A---DIIHRDLKPSNLAVNEDCELKILDFGLARHTDDE-----MTGYVATRWYRAPEIML 192
Query: 509 HG-KVSEKIDVYAFGIVLLELLSGKKPINSENPKGQESLVM 548
+ ++ +D+++ G ++ ELL+G+ + Q L++
Sbjct: 193 NWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLIL 233
>pdb|3KQ7|A Chain A, Structure Of Human P38alpha With N-[4-Methyl-3-(6-{[2-(1-
Methylpyrrolidin-2-Yl)ethyl]amino}pyridine-3-
Amido)phenyl]- 2-(Morpholin-4-Yl)pyridine-4-Carboxamide
Length = 380
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 49/188 (26%), Positives = 92/188 (48%), Gaps = 24/188 (12%)
Query: 355 GKELAVKIL-KPSEDVL--KEFASEIEIITALHHRNIISLFGFCF------EDNNLLLVY 405
G +AVK L +P + ++ K E+ ++ + H N+I L E N++ LV
Sbjct: 67 GLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVT 126
Query: 406 DFLSRGSLEENLHGNKKDGNAFGWTERYKVAVGVAEALDYLHNSCEQPVIHKDVKSSNIL 465
+ G+ N+ +K + Y++ G L Y+H++ +IH+D+K SN+
Sbjct: 127 HLM--GADLNNIVKCQKLTDDHVQFLIYQILRG----LKYIHSA---DIIHRDLKPSNLA 177
Query: 466 LSDDFEPQLSDFGLASWLSTSSSHLTCTDVAGTFGYLAPEYFMHG-KVSEKIDVYAFGIV 524
+++D E ++ DFGLA T T Y APE ++ ++ +D+++ G +
Sbjct: 178 VNEDCELKILDFGLARHTDDE-----MTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCI 232
Query: 525 LLELLSGK 532
+ ELL+G+
Sbjct: 233 MAELLTGR 240
>pdb|4DIT|A Chain A, Crystal Structure Of Gsk3beta In Complex With A
Imidazopyridine Inhibitor
Length = 382
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 61/207 (29%), Positives = 94/207 (45%), Gaps = 25/207 (12%)
Query: 338 LVGKGGHSHVYRGCLPDGKELAVKILKPSEDVLKEFAS-EIEIITALHHRNIISLFGFCF 396
++G G VY+ L D EL V I K +D K F + E++I+ L H NI+ L F +
Sbjct: 39 VIGNGSFGVVYQAKLCDSGEL-VAIKKVLQD--KRFKNRELQIMRKLDHCNIVRLRYFFY 95
Query: 397 EDNN------LLLVYDFLSRGSLEENLHGNK-KDGNAFGWTERYKVAVGVAEALDYLHNS 449
L LV D++ H ++ K + + Y + +L Y+H+
Sbjct: 96 SSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQL--FRSLAYIHSF 153
Query: 450 CEQPVIHKDVKSSNILLSDDFEP-QLSDFGLASWLSTSSSHLT--CTDVAGTFGYLAPEY 506
+ H+D+K N+LL D +L DFG A L +++ C+ Y APE
Sbjct: 154 G---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXICSRY-----YRAPEL 205
Query: 507 -FMHGKVSEKIDVYAFGIVLLELLSGK 532
F + IDV++ G VL ELL G+
Sbjct: 206 IFGATDYTSSIDVWSAGCVLAELLLGQ 232
>pdb|3K3I|A Chain A, P38alpha Bound To Novel Dgf-Out Compound Pf-00215955
Length = 350
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 55/221 (24%), Positives = 102/221 (46%), Gaps = 25/221 (11%)
Query: 339 VGKGGHSHVYRGC-LPDGKELAVKIL-KPSEDVL--KEFASEIEIITALHHRNIISLFGF 394
VG G + V G +AVK L +P + ++ K E+ ++ + H N+I L
Sbjct: 28 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 87
Query: 395 CF------EDNNLLLVYDFLSRGSLEENLHGNKKDGNAFGWTERYKVAVGVAEALDYLHN 448
E N++ LV + G+ N+ +K + Y++ G L Y+H+
Sbjct: 88 FTPARSLEEFNDVYLVTHLM--GADLNNIVKCQKLTDDHVQFLIYQILRG----LKYIHS 141
Query: 449 SCEQPVIHKDVKSSNILLSDDFEPQLSDFGLASWLSTSSSHLTCTDVAGTFGYLAPEYFM 508
+ +IH+D+K SN+ +++D E ++ DFGLA T T Y APE +
Sbjct: 142 A---DIIHRDLKPSNLAVNEDCELKILDFGLARHTDDE-----MTGYVATRWYRAPEIML 193
Query: 509 HG-KVSEKIDVYAFGIVLLELLSGKKPINSENPKGQESLVM 548
+ ++ +D+++ G ++ ELL+G+ + Q L++
Sbjct: 194 NWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLIL 234
>pdb|1IAN|A Chain A, Human P38 Map Kinase Inhibitor Complex
pdb|2QD9|A Chain A, P38 Alpha Map Kinase Inhibitor Based On Heterobicyclic
Scaffolds
pdb|2RG5|A Chain A, Phenylalanine Pyrrolotriazine P38 Alpha Map Kinase
Inhibitor Compound 11b
pdb|2RG6|A Chain A, Phenylalanine Pyrrolotriazine P38 Alpha Map Kinase
Inhibitor Compound 11j
pdb|3C5U|A Chain A, P38 Alpha Map Kinase Complexed With A Benzothiazole Based
Inhibitor
pdb|3BV2|A Chain A, Morpholino Pyrrolotriazine P38 Alpha Map Kinase Inhibitor
Compound 30
pdb|3BV3|A Chain A, Morpholino Pyrrolotriazine P38 Alpha Map Kinase Inhibitor
Compound 2
pdb|3BX5|A Chain A, P38 Alpha Map Kinase Complexed With Bms-640994
pdb|3L8X|A Chain A, P38 Alpha Kinase Complexed With A Pyrazolo-Pyrimidine
Based Inhibitor
pdb|3NWW|A Chain A, P38 Alpha Kinase Complexed With A
2-Aminothiazol-5-Yl-Pyrimidine Based Inhibitor
pdb|3MVL|A Chain A, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7k
pdb|3MVL|B Chain B, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7k
pdb|3MVM|A Chain A, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7v
pdb|3MVM|B Chain B, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7v
pdb|3OCG|A Chain A, P38 Alpha Kinase Complexed With A 5-Amino-Pyrazole Based
Inhibitor
pdb|3S4Q|A Chain A, P38 Alpha Kinase Complexed With A Pyrazolo-Triazine Based
Inhibitor
Length = 366
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 51/204 (25%), Positives = 97/204 (47%), Gaps = 24/204 (11%)
Query: 355 GKELAVKIL-KPSEDVL--KEFASEIEIITALHHRNIISLFGFCF------EDNNLLLVY 405
G +AVK L +P + ++ K E+ ++ + H N+I L E N++ LV
Sbjct: 53 GLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVT 112
Query: 406 DFLSRGSLEENLHGNKKDGNAFGWTERYKVAVGVAEALDYLHNSCEQPVIHKDVKSSNIL 465
+ G+ N+ +K + Y++ G L Y+H++ +IH+D+K SN+
Sbjct: 113 HLM--GADLNNIVKCQKLTDDHVQFLIYQILRG----LKYIHSA---DIIHRDLKPSNLA 163
Query: 466 LSDDFEPQLSDFGLASWLSTSSSHLTCTDVAGTFGYLAPEYFMHG-KVSEKIDVYAFGIV 524
+++D E ++ DFGLA T T Y APE ++ ++ +D+++ G +
Sbjct: 164 VNEDCELKILDFGLARHTDDE-----MTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCI 218
Query: 525 LLELLSGKKPINSENPKGQESLVM 548
+ ELL+G+ + Q L++
Sbjct: 219 MAELLTGRTLFPGTDHIDQLKLIL 242
>pdb|1M7Q|A Chain A, Crystal Structure Of P38 Map Kinase In Complex With A
Dihydroquinazolinone Inhibitor
pdb|1OUK|A Chain A, The Structure Of P38 Alpha In Complex With A
Pyridinylimidazole Inhibitor
pdb|1OUY|A Chain A, The Structure Of P38 Alpha In Complex With A
Dihydropyrido- Pyrimidine Inhibitor
pdb|1R39|A Chain A, The Structure Of P38alpha
pdb|1YQJ|A Chain A, Crystal Structure Of P38 Alpha In Complex With A Selective
Pyridazine Inhibitor
pdb|2OKR|A Chain A, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2OKR|D Chain D, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|A Chain A, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|B Chain B, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|1WFC|A Chain A, Structure Of Apo, Unphosphorylated, P38 Mitogen Activated
Protein Kinase P38 (P38 Map Kinase) The Mammalian
Homologue Of The Yeast Hog1 Protein
pdb|3DS6|A Chain A, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|B Chain B, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|C Chain C, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|D Chain D, P38 Complex With A Phthalazine Inhibitor
pdb|3FC1|X Chain X, Crystal Structure Of P38 Kinase Bound To
Pyrimido-Pyridazinone Inhibitor
pdb|3GFE|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridinone Inhibitor
pdb|3ITZ|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridazine Inhibitor
pdb|3LHJ|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridinone Inhibitor.
pdb|3ZYA|A Chain A, Human P38 Map Kinase In Complex With 2-Amino-Phenylamino-
Dibenzosuberone
pdb|3U8W|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Triazolopyridazinone Inhibitor
Length = 366
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 53/205 (25%), Positives = 97/205 (47%), Gaps = 25/205 (12%)
Query: 339 VGKGGHSHVYRGC-LPDGKELAVKIL-KPSEDVL--KEFASEIEIITALHHRNIISLFGF 394
VG G + V G +AVK L +P + ++ K E+ ++ + H N+I L
Sbjct: 36 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 95
Query: 395 CF------EDNNLLLVYDFLSRGSLEENLHGNKKDGNAFGWTERYKVAVGVAEALDYLHN 448
E N++ LV + G+ N+ +K + Y++ G L Y+H+
Sbjct: 96 FTPARSLEEFNDVYLVTHLM--GADLNNIVKCQKLTDDHVQFLIYQILRG----LKYIHS 149
Query: 449 SCEQPVIHKDVKSSNILLSDDFEPQLSDFGLASWLSTSSSHLTCTDVAGTFGYLAPEYFM 508
+ +IH+D+K SN+ +++D E ++ DFGLA T T Y APE +
Sbjct: 150 A---DIIHRDLKPSNLAVNEDCELKILDFGLARHTDDE-----MTGYVATRWYRAPEIML 201
Query: 509 HG-KVSEKIDVYAFGIVLLELLSGK 532
+ ++ +D+++ G ++ ELL+G+
Sbjct: 202 NWMHYNQTVDIWSVGCIMAELLTGR 226
>pdb|1BL6|A Chain A, The Complex Structure Of The Map Kinase P38SB216995
pdb|1BL7|A Chain A, The Complex Structure Of The Map Kinase P38SB220025
pdb|2EWA|A Chain A, Dual Binding Mode Of Pyridinylimidazole To Map Kinase P38
pdb|1A9U|A Chain A, The Complex Structure Of The Map Kinase P38SB203580
pdb|3HA8|A Chain A, The Complex Structure Of The Map Kinase P38COMPOUND 14B
Length = 379
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 49/188 (26%), Positives = 92/188 (48%), Gaps = 24/188 (12%)
Query: 355 GKELAVKIL-KPSEDVL--KEFASEIEIITALHHRNIISLFGFCF------EDNNLLLVY 405
G +AVK L +P + ++ K E+ ++ + H N+I L E N++ LV
Sbjct: 66 GLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVT 125
Query: 406 DFLSRGSLEENLHGNKKDGNAFGWTERYKVAVGVAEALDYLHNSCEQPVIHKDVKSSNIL 465
+ G+ N+ +K + Y++ G L Y+H++ +IH+D+K SN+
Sbjct: 126 HLM--GADLNNIVKCQKLTDDHVQFLIYQILRG----LKYIHSA---DIIHRDLKPSNLA 176
Query: 466 LSDDFEPQLSDFGLASWLSTSSSHLTCTDVAGTFGYLAPEYFMHG-KVSEKIDVYAFGIV 524
+++D E ++ DFGLA T T Y APE ++ ++ +D+++ G +
Sbjct: 177 VNEDCELKILDFGLARHTDDE-----MTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCI 231
Query: 525 LLELLSGK 532
+ ELL+G+
Sbjct: 232 MAELLTGR 239
>pdb|3HEC|A Chain A, P38 In Complex With Imatinib
pdb|3HEG|A Chain A, P38 In Complex With Sorafenib
Length = 348
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 55/221 (24%), Positives = 102/221 (46%), Gaps = 25/221 (11%)
Query: 339 VGKGGHSHVYRGC-LPDGKELAVKIL-KPSEDVL--KEFASEIEIITALHHRNIISLFGF 394
VG G + V G +AVK L +P + ++ K E+ ++ + H N+I L
Sbjct: 26 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 85
Query: 395 CF------EDNNLLLVYDFLSRGSLEENLHGNKKDGNAFGWTERYKVAVGVAEALDYLHN 448
E N++ LV + G+ N+ +K + Y++ G L Y+H+
Sbjct: 86 FTPARSLEEFNDVYLVTHLM--GADLNNIVKCQKLTDDHVQFLIYQILRG----LKYIHS 139
Query: 449 SCEQPVIHKDVKSSNILLSDDFEPQLSDFGLASWLSTSSSHLTCTDVAGTFGYLAPEYFM 508
+ +IH+D+K SN+ +++D E ++ DFGLA T T Y APE +
Sbjct: 140 A---DIIHRDLKPSNLAVNEDCELKILDFGLARHTDDE-----MTGYVATRWYRAPEIML 191
Query: 509 HG-KVSEKIDVYAFGIVLLELLSGKKPINSENPKGQESLVM 548
+ ++ +D+++ G ++ ELL+G+ + Q L++
Sbjct: 192 NWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLIL 232
>pdb|4ACC|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACC|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACD|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACD|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACG|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACG|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACH|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACH|B Chain B, Gsk3b In Complex With Inhibitor
Length = 465
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 61/207 (29%), Positives = 94/207 (45%), Gaps = 25/207 (12%)
Query: 338 LVGKGGHSHVYRGCLPDGKELAVKILKPSEDVLKEFAS-EIEIITALHHRNIISLFGFCF 396
++G G VY+ L D EL V I K +D K F + E++I+ L H NI+ L F +
Sbjct: 106 VIGNGSFGVVYQAKLCDSGEL-VAIKKVLQD--KRFKNRELQIMRKLDHCNIVRLRYFFY 162
Query: 397 EDNN------LLLVYDFLSRGSLEENLHGNK-KDGNAFGWTERYKVAVGVAEALDYLHNS 449
L LV D++ H ++ K + + Y + +L Y+H+
Sbjct: 163 SSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQL--FRSLAYIHSF 220
Query: 450 CEQPVIHKDVKSSNILLSDDFEP-QLSDFGLASWLSTSSSHLT--CTDVAGTFGYLAPEY 506
+ H+D+K N+LL D +L DFG A L +++ C+ Y APE
Sbjct: 221 G---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICSRY-----YRAPEL 272
Query: 507 -FMHGKVSEKIDVYAFGIVLLELLSGK 532
F + IDV++ G VL ELL G+
Sbjct: 273 IFGATDYTSSIDVWSAGCVLAELLLGQ 299
>pdb|2O5K|A Chain A, Crystal Structure Of Gsk3beta In Complex With A
Benzoimidazol Inhibitor
Length = 372
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 61/207 (29%), Positives = 96/207 (46%), Gaps = 25/207 (12%)
Query: 338 LVGKGGHSHVYRGCLPDGKELAVKILKPSEDVLKEFAS-EIEIITALHHRNIISLFGFCF 396
++G G VY+ L D EL V I K +D K F + E++I+ L H NI+ L F +
Sbjct: 40 VIGNGSFGVVYQAKLCDSGEL-VAIKKVLQD--KRFKNRELQIMRKLDHCNIVRLRYFFY 96
Query: 397 ------EDNNLLLVYDFLSRGSLEENLHGNK-KDGNAFGWTERYKVAVGVAEALDYLHNS 449
++ L LV D++ H ++ K + + Y + +L Y+H+
Sbjct: 97 SSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQL--FRSLAYIHSF 154
Query: 450 CEQPVIHKDVKSSNILLSDDFEP-QLSDFGLASWLSTSSSHLT--CTDVAGTFGYLAPEY 506
+ H+D+K N+LL D +L DFG A L +++ C+ Y APE
Sbjct: 155 G---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICSRY-----YRAPEL 206
Query: 507 -FMHGKVSEKIDVYAFGIVLLELLSGK 532
F + IDV++ G VL ELL G+
Sbjct: 207 IFGATDYTSSIDVWSAGCVLAELLLGQ 233
>pdb|2Y8O|A Chain A, Crystal Structure Of Human P38alpha Complexed With A Mapk
Docking Peptide
Length = 362
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 53/205 (25%), Positives = 97/205 (47%), Gaps = 25/205 (12%)
Query: 339 VGKGGHSHVYRGC-LPDGKELAVKIL-KPSEDVL--KEFASEIEIITALHHRNIISLFGF 394
VG G + V G +AVK L +P + ++ K E+ ++ + H N+I L
Sbjct: 32 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 91
Query: 395 CF------EDNNLLLVYDFLSRGSLEENLHGNKKDGNAFGWTERYKVAVGVAEALDYLHN 448
E N++ LV + G+ N+ +K + Y++ G L Y+H+
Sbjct: 92 FTPARSLEEFNDVYLVTHLM--GADLNNIVKCQKLTDDHVQFLIYQILRG----LKYIHS 145
Query: 449 SCEQPVIHKDVKSSNILLSDDFEPQLSDFGLASWLSTSSSHLTCTDVAGTFGYLAPEYFM 508
+ +IH+D+K SN+ +++D E ++ DFGLA T T Y APE +
Sbjct: 146 A---DIIHRDLKPSNLAVNEDSELKILDFGLARHTDDE-----MTGYVATRWYRAPEIML 197
Query: 509 HG-KVSEKIDVYAFGIVLLELLSGK 532
+ ++ +D+++ G ++ ELL+G+
Sbjct: 198 NWMHYNQTVDIWSVGCIMAELLTGR 222
>pdb|3S3I|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
Length = 349
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 55/221 (24%), Positives = 102/221 (46%), Gaps = 25/221 (11%)
Query: 339 VGKGGHSHVYRGC-LPDGKELAVKIL-KPSEDVL--KEFASEIEIITALHHRNIISLFGF 394
VG G + V G +AVK L +P + ++ K E+ ++ + H N+I L
Sbjct: 27 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 86
Query: 395 CF------EDNNLLLVYDFLSRGSLEENLHGNKKDGNAFGWTERYKVAVGVAEALDYLHN 448
E N++ LV + G+ N+ +K + Y++ G L Y+H+
Sbjct: 87 FTPARSLEEFNDVYLVTHLM--GADLNNIVKCQKLTDDHVQFLIYQILRG----LKYIHS 140
Query: 449 SCEQPVIHKDVKSSNILLSDDFEPQLSDFGLASWLSTSSSHLTCTDVAGTFGYLAPEYFM 508
+ +IH+D+K SN+ +++D E ++ DFGLA T T Y APE +
Sbjct: 141 A---DIIHRDLKPSNLAVNEDCELKILDFGLARHTDDE-----MTGYVATRWYRAPEIML 192
Query: 509 HG-KVSEKIDVYAFGIVLLELLSGKKPINSENPKGQESLVM 548
+ ++ +D+++ G ++ ELL+G+ + Q L++
Sbjct: 193 NWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLIL 233
>pdb|2PUU|A Chain A, Crystal Structure Of P38 Complex With 1-(5-Tert-Butyl-2-P-
Tolyl-2h-Pyrazol-3-Yl)-3-[4-(6-Morpholin-4-Ylmethyl-
Pyridin-3-Yl)naphthalen-1-Yl]urea
pdb|3CTQ|A Chain A, Structure Of Map Kinase P38 In Complex With A
1-O-Tolyl-1,2, 3-Triazole-4-Carboxamide
Length = 348
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 60/242 (24%), Positives = 110/242 (45%), Gaps = 30/242 (12%)
Query: 323 YQELLSATSNFLPEYL-----VGKGGHSHVYRGC-LPDGKELAVKIL-KPSEDVL--KEF 373
Y++ L+ T +PE VG G + V G +AVK L +P + ++ K
Sbjct: 5 YRQELAKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRT 64
Query: 374 ASEIEIITALHHRNIISLFGFCF------EDNNLLLVYDFLSRGSLEENLHGNKKDGNAF 427
E+ ++ + H N+I L E N++ LV + G+ N+ K +
Sbjct: 65 YRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLM--GADLNNIVKCAKLTDDH 122
Query: 428 GWTERYKVAVGVAEALDYLHNSCEQPVIHKDVKSSNILLSDDFEPQLSDFGLASWLSTSS 487
Y++ G L Y+H++ +IH+D+K SN+ +++D E ++ DFGLA
Sbjct: 123 VQFLIYQILRG----LKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLARHTDDE- 174
Query: 488 SHLTCTDVAGTFGYLAPEYFMHG-KVSEKIDVYAFGIVLLELLSGKKPINSENPKGQESL 546
T T Y APE ++ ++ +D+++ G ++ ELL+G+ + Q L
Sbjct: 175 ----MTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKL 230
Query: 547 VM 548
++
Sbjct: 231 IL 232
>pdb|3DT1|A Chain A, P38 Complexed With A Quinazoline Inhibitor
Length = 383
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 49/188 (26%), Positives = 92/188 (48%), Gaps = 24/188 (12%)
Query: 355 GKELAVKIL-KPSEDVL--KEFASEIEIITALHHRNIISLFGFCF------EDNNLLLVY 405
G +AVK L +P + ++ K E+ ++ + H N+I L E N++ LV
Sbjct: 70 GLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVT 129
Query: 406 DFLSRGSLEENLHGNKKDGNAFGWTERYKVAVGVAEALDYLHNSCEQPVIHKDVKSSNIL 465
+ G+ N+ +K + Y++ G L Y+H++ +IH+D+K SN+
Sbjct: 130 HLM--GADLNNIVKCQKLTDDHVQFLIYQILRG----LKYIHSA---DIIHRDLKPSNLA 180
Query: 466 LSDDFEPQLSDFGLASWLSTSSSHLTCTDVAGTFGYLAPEYFMHG-KVSEKIDVYAFGIV 524
+++D E ++ DFGLA T T Y APE ++ ++ +D+++ G +
Sbjct: 181 VNEDCELKILDFGLARHTDDE-----MTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCI 235
Query: 525 LLELLSGK 532
+ ELL+G+
Sbjct: 236 MAELLTGR 243
>pdb|1GNG|A Chain A, Glycogen Synthase Kinase-3 Beta (Gsk3) Complex With
Frattide Peptide
pdb|1GNG|B Chain B, Glycogen Synthase Kinase-3 Beta (Gsk3) Complex With
Frattide Peptide
Length = 378
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 61/207 (29%), Positives = 96/207 (46%), Gaps = 25/207 (12%)
Query: 338 LVGKGGHSHVYRGCLPDGKELAVKILKPSEDVLKEFAS-EIEIITALHHRNIISLFGFCF 396
++G G VY+ L D EL V I K +D K F + E++I+ L H NI+ L F +
Sbjct: 46 VIGNGSFGVVYQAKLCDSGEL-VAIKKVLQD--KRFKNRELQIMRKLDHCNIVRLRYFFY 102
Query: 397 ------EDNNLLLVYDFLSRGSLEENLHGNK-KDGNAFGWTERYKVAVGVAEALDYLHNS 449
++ L LV D++ H ++ K + + Y + +L Y+H+
Sbjct: 103 SSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQL--FRSLAYIHSF 160
Query: 450 CEQPVIHKDVKSSNILLSDDFEP-QLSDFGLASWLSTSSSHLT--CTDVAGTFGYLAPEY 506
+ H+D+K N+LL D +L DFG A L +++ C+ Y APE
Sbjct: 161 G---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXICSRY-----YRAPEL 212
Query: 507 -FMHGKVSEKIDVYAFGIVLLELLSGK 532
F + IDV++ G VL ELL G+
Sbjct: 213 IFGATDYTSSIDVWSAGCVLAELLLGQ 239
>pdb|4AFJ|A Chain A, 5-Aryl-4-Carboxamide-1,3-Oxazoles: Potent And Selective
Gsk-3 Inhibitors
pdb|4AFJ|B Chain B, 5-Aryl-4-Carboxamide-1,3-Oxazoles: Potent And Selective
Gsk-3 Inhibitors
Length = 367
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 61/207 (29%), Positives = 94/207 (45%), Gaps = 25/207 (12%)
Query: 338 LVGKGGHSHVYRGCLPDGKELAVKILKPSEDVLKEFAS-EIEIITALHHRNIISLFGFCF 396
++G G VY+ L D EL V I K +D K F + E++I+ L H NI+ L F +
Sbjct: 35 VIGNGSFGVVYQAKLCDSGEL-VAIKKVLQD--KRFKNRELQIMRKLDHCNIVRLRYFFY 91
Query: 397 EDNN------LLLVYDFLSRGSLEENLHGNK-KDGNAFGWTERYKVAVGVAEALDYLHNS 449
L LV D++ H ++ K + + Y + +L Y+H+
Sbjct: 92 SSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQL--FRSLAYIHSF 149
Query: 450 CEQPVIHKDVKSSNILLSDDFEP-QLSDFGLASWLSTSSSHLT--CTDVAGTFGYLAPEY 506
+ H+D+K N+LL D +L DFG A L +++ C+ Y APE
Sbjct: 150 G---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXICSRY-----YRAPEL 201
Query: 507 -FMHGKVSEKIDVYAFGIVLLELLSGK 532
F + IDV++ G VL ELL G+
Sbjct: 202 IFGATDYTSSIDVWSAGCVLAELLLGQ 228
>pdb|1YWR|A Chain A, Crystal Structure Analysis Of Inactive P38 Kinase Domain
In Complex With A Monocyclic Pyrazolone Inhibitor
Length = 360
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 55/208 (26%), Positives = 101/208 (48%), Gaps = 31/208 (14%)
Query: 339 VGKGGHSHVYRGC-LPDGKELAVKIL-KPSEDVL--KEFASEIEIITALHHRNIISLFGF 394
VG G + V G +AVK L +P + ++ K E+ ++ + H N+I L
Sbjct: 30 VGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 89
Query: 395 CF------EDNNLLLVYDFLSRGSLEENLHGNKKDGNAFGWTERYKVAVGVAEALDYLHN 448
E N++ LV + G+ N+ +K + Y++ G L Y+H+
Sbjct: 90 FTPARSLEEFNDVYLVTHLM--GADLNNIVKCQKLTDDHVQFLIYQILRG----LKYIHS 143
Query: 449 SCEQPVIHKDVKSSNILLSDDFEPQLSDFGLASWLSTSSSHLTCTDVAG---TFGYLAPE 505
+ +IH+D+K SN+ +++D E ++ DFGLA T ++AG T Y APE
Sbjct: 144 A---DIIHRDLKPSNLAVNEDCELKILDFGLARH--------TDDEMAGFVATRWYRAPE 192
Query: 506 YFMHG-KVSEKIDVYAFGIVLLELLSGK 532
++ ++ +D+++ G ++ ELL+G+
Sbjct: 193 IMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|1YW2|A Chain A, Mutated Mus Musculus P38 Kinase (Mp38)
Length = 360
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 55/208 (26%), Positives = 101/208 (48%), Gaps = 31/208 (14%)
Query: 339 VGKGGHSHVYRGC-LPDGKELAVKIL-KPSEDVL--KEFASEIEIITALHHRNIISLFGF 394
VG G + V G +AVK L +P + ++ K E+ ++ + H N+I L
Sbjct: 30 VGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 89
Query: 395 CF------EDNNLLLVYDFLSRGSLEENLHGNKKDGNAFGWTERYKVAVGVAEALDYLHN 448
E N++ LV + G+ N+ +K + Y++ G L Y+H+
Sbjct: 90 FTPARSLEEFNDVYLVTHLM--GADLNNIVKCQKLTDDHVQFLIYQILRG----LKYIHS 143
Query: 449 SCEQPVIHKDVKSSNILLSDDFEPQLSDFGLASWLSTSSSHLTCTDVAG---TFGYLAPE 505
+ +IH+D+K SN+ +++D E ++ DFGLA T ++AG T Y APE
Sbjct: 144 A---DIIHRDLKPSNLAVNEDCELKILDFGLARH--------TDDEMAGFVATRWYRAPE 192
Query: 506 YFMHG-KVSEKIDVYAFGIVLLELLSGK 532
++ ++ +D+++ G ++ ELL+G+
Sbjct: 193 IMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|3ZRK|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRK|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRL|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRL|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRM|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As Gsk-
3beta Inhibitors
pdb|3ZRM|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As Gsk-
3beta Inhibitors
Length = 371
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 61/207 (29%), Positives = 94/207 (45%), Gaps = 25/207 (12%)
Query: 338 LVGKGGHSHVYRGCLPDGKELAVKILKPSEDVLKEFAS-EIEIITALHHRNIISLFGFCF 396
++G G VY+ L D EL V I K +D K F + E++I+ L H NI+ L F +
Sbjct: 39 VIGNGSFGVVYQAKLCDSGEL-VAIKKVLQD--KRFKNRELQIMRKLDHCNIVRLRYFFY 95
Query: 397 EDNN------LLLVYDFLSRGSLEENLHGNK-KDGNAFGWTERYKVAVGVAEALDYLHNS 449
L LV D++ H ++ K + + Y + +L Y+H+
Sbjct: 96 SSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQL--FRSLAYIHSF 153
Query: 450 CEQPVIHKDVKSSNILLSDDFEP-QLSDFGLASWLSTSSSHLT--CTDVAGTFGYLAPEY 506
+ H+D+K N+LL D +L DFG A L +++ C+ Y APE
Sbjct: 154 G---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXICSRY-----YRAPEL 205
Query: 507 -FMHGKVSEKIDVYAFGIVLLELLSGK 532
F + IDV++ G VL ELL G+
Sbjct: 206 IFGATDYTSSIDVWSAGCVLAELLLGQ 232
>pdb|1OVE|A Chain A, The Structure Of P38 Alpha In Complex With A
Dihydroquinolinone
pdb|1R3C|A Chain A, The Structure Of P38alpha C162s Mutant
pdb|2I0H|A Chain A, The Structure Of P38alpha In Complex With An
Arylpyridazinone
pdb|3GC7|A Chain A, The Structure Of P38alpha In Complex With A
Dihydroquinazolinone
pdb|3NEW|A Chain A, P38-Alpha Complexed With Compound 10
Length = 366
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 53/205 (25%), Positives = 97/205 (47%), Gaps = 25/205 (12%)
Query: 339 VGKGGHSHVYRGC-LPDGKELAVKIL-KPSEDVL--KEFASEIEIITALHHRNIISLFGF 394
VG G + V G +AVK L +P + ++ K E+ ++ + H N+I L
Sbjct: 36 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 95
Query: 395 CF------EDNNLLLVYDFLSRGSLEENLHGNKKDGNAFGWTERYKVAVGVAEALDYLHN 448
E N++ LV + G+ N+ +K + Y++ G L Y+H+
Sbjct: 96 FTPARSLEEFNDVYLVTHLM--GADLNNIVKCQKLTDDHVQFLIYQILRG----LKYIHS 149
Query: 449 SCEQPVIHKDVKSSNILLSDDFEPQLSDFGLASWLSTSSSHLTCTDVAGTFGYLAPEYFM 508
+ +IH+D+K SN+ +++D E ++ DFGLA T T Y APE +
Sbjct: 150 A---DIIHRDLKPSNLAVNEDSELKILDFGLARHTDDE-----MTGYVATRWYRAPEIML 201
Query: 509 HG-KVSEKIDVYAFGIVLLELLSGK 532
+ ++ +D+++ G ++ ELL+G+
Sbjct: 202 NWMHYNQTVDIWSVGCIMAELLTGR 226
>pdb|3HNG|A Chain A, Crystal Structure Of Vegfr1 In Complex With
N-(4-chlorophenyl)-2-
((pyridin-4-ylmethyl)amino)benzamide
Length = 360
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 28/92 (30%), Positives = 52/92 (56%), Gaps = 3/92 (3%)
Query: 439 VAEALDYLHNSCEQPVIHKDVKSSNILLSDDFEPQLSDFGLASWLSTSSSHLTCTDVAGT 498
VA +++L + + IH+D+ + NILLS++ ++ DFGLA + + ++ D
Sbjct: 208 VARGMEFLSS---RKCIHRDLAARNILLSENNVVKICDFGLARDIYKNPDYVRKGDTRLP 264
Query: 499 FGYLAPEYFMHGKVSEKIDVYAFGIVLLELLS 530
++APE S K DV+++G++L E+ S
Sbjct: 265 LKWMAPESIFDKIYSTKSDVWSYGVLLWEIFS 296
Score = 34.3 bits (77), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 20/73 (27%), Positives = 39/73 (53%), Gaps = 4/73 (5%)
Query: 353 PDGKELAVKILKPSEDV--LKEFASEIEIITAL-HHRNIISLFGFCFEDNN-LLLVYDFL 408
P + +AVK+LK K +E++I+T + HH N+++L G C + L+++ ++
Sbjct: 55 PTCRTVAVKMLKEGATASEYKALMTELKILTHIGHHLNVVNLLGACTKQGGPLMVIVEYC 114
Query: 409 SRGSLEENLHGNK 421
G+L L +
Sbjct: 115 KYGNLSNYLKSKR 127
>pdb|2GHL|A Chain A, Mutant Mus Musculus P38 Kinase Domain In Complex With
Inhibitor Pg-874743
pdb|2GHM|A Chain A, Mutated Map Kinase P38 (Mus Musculus) In Complex With
Inhbitor Pg-895449
Length = 348
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 54/221 (24%), Positives = 102/221 (46%), Gaps = 25/221 (11%)
Query: 339 VGKGGHSHVYRGC-LPDGKELAVKIL-KPSEDVL--KEFASEIEIITALHHRNIISLFGF 394
VG G + V G +AVK L +P + ++ K E+ ++ + H N+I L
Sbjct: 26 VGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 85
Query: 395 CF------EDNNLLLVYDFLSRGSLEENLHGNKKDGNAFGWTERYKVAVGVAEALDYLHN 448
E N++ LV + G+ N+ +K + Y++ G L Y+H+
Sbjct: 86 FTPARSLEEFNDVYLVTHLM--GADLNNIVKCQKLTDDHVQFLIYQILRG----LKYIHS 139
Query: 449 SCEQPVIHKDVKSSNILLSDDFEPQLSDFGLASWLSTSSSHLTCTDVAGTFGYLAPEYFM 508
+ +IH+D+K SN+ +++D E ++ DFGLA + T Y APE +
Sbjct: 140 A---DIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMAGFVATR-----WYRAPEIML 191
Query: 509 HG-KVSEKIDVYAFGIVLLELLSGKKPINSENPKGQESLVM 548
+ ++ +D+++ G ++ ELL+G+ + Q L++
Sbjct: 192 NWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLIL 232
>pdb|2OW3|A Chain A, Glycogen Synthase Kinase-3 Beta In Complex With Bis-
(Indole)maleimide Pyridinophane Inhibitor
pdb|2OW3|B Chain B, Glycogen Synthase Kinase-3 Beta In Complex With Bis-
(Indole)maleimide Pyridinophane Inhibitor
Length = 352
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 61/207 (29%), Positives = 96/207 (46%), Gaps = 25/207 (12%)
Query: 338 LVGKGGHSHVYRGCLPDGKELAVKILKPSEDVLKEFAS-EIEIITALHHRNIISLFGFCF 396
++G G VY+ L D EL V I K +D K F + E++I+ L H NI+ L F +
Sbjct: 27 VIGNGSFGVVYQAKLCDSGEL-VAIKKVLQD--KRFKNRELQIMRKLDHCNIVRLRYFFY 83
Query: 397 ------EDNNLLLVYDFLSRGSLEENLHGNK-KDGNAFGWTERYKVAVGVAEALDYLHNS 449
++ L LV D++ H ++ K + + Y + +L Y+H+
Sbjct: 84 SSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQL--FRSLAYIHSF 141
Query: 450 CEQPVIHKDVKSSNILLSDDFEP-QLSDFGLASWLSTSSSHLT--CTDVAGTFGYLAPEY 506
+ H+D+K N+LL D +L DFG A L +++ C+ Y APE
Sbjct: 142 G---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXICSRY-----YRAPEL 193
Query: 507 -FMHGKVSEKIDVYAFGIVLLELLSGK 532
F + IDV++ G VL ELL G+
Sbjct: 194 IFGATDYTSSIDVWSAGCVLAELLLGQ 220
>pdb|3GCP|A Chain A, Human P38 Map Kinase In Complex With Sb203580
pdb|3GCQ|A Chain A, Human P38 Map Kinase In Complex With Rl45
pdb|3GCS|A Chain A, Human P38 Map Kinase In Complex With Sorafenib
pdb|3GCV|A Chain A, Human P38 Map Kinase In Complex With Rl62
pdb|3HV3|A Chain A, Human P38 Map Kinase In Complex With Rl49
pdb|3IW5|A Chain A, Human P38 Map Kinase In Complex With An Indole Derivative
pdb|3IW6|A Chain A, Human P38 Map Kinase In Complex With A Benzylpiperazin-
Pyrrol
pdb|3IW7|A Chain A, Human P38 Map Kinase In Complex With An Imidazo-Pyridine
pdb|3IW8|A Chain A, Structure Of Inactive Human P38 Map Kinase In Complex With
A Thiazole-Urea
pdb|3HUB|A Chain A, Human P38 Map Kinase In Complex With Scios-469
pdb|3L8S|A Chain A, Human P38 Map Kinase In Complex With Cp-547632
pdb|3LFB|A Chain A, Human P38 Map Kinase In Complex With Rl98
pdb|3LFC|A Chain A, Human P38 Map Kinase In Complex With Rl99
pdb|3LFD|A Chain A, Human P38 Map Kinase In Complex With Rl113
pdb|3LFE|A Chain A, Human P38 Map Kinase In Complex With Rl116
pdb|3LFF|A Chain A, Human P38 Map Kinase In Complex With Rl166
pdb|3PG3|A Chain A, Human P38 Map Kinase In Complex With Rl182
Length = 360
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 52/205 (25%), Positives = 97/205 (47%), Gaps = 25/205 (12%)
Query: 339 VGKGGHSHVYRGC-LPDGKELAVKIL-KPSEDVL--KEFASEIEIITALHHRNIISLFGF 394
VG G + V G +AVK L +P + ++ K E+ ++ + H N+I L
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 89
Query: 395 CF------EDNNLLLVYDFLSRGSLEENLHGNKKDGNAFGWTERYKVAVGVAEALDYLHN 448
E N++ LV + G+ N+ ++K + Y++ G L Y+H+
Sbjct: 90 FTPARSLEEFNDVYLVTHLM--GADLNNIVKSQKLTDDHVQFLIYQILRG----LKYIHS 143
Query: 449 SCEQPVIHKDVKSSNILLSDDFEPQLSDFGLASWLSTSSSHLTCTDVAGTFGYLAPEYFM 508
+ +IH+D+K SN+ +++D E ++ DFGL T T Y APE +
Sbjct: 144 A---DIIHRDLKPSNLAVNEDSELKILDFGLCRHTDDE-----MTGYVATRWYRAPEIML 195
Query: 509 HG-KVSEKIDVYAFGIVLLELLSGK 532
+ ++ +D+++ G ++ ELL+G+
Sbjct: 196 NWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|3F7Z|A Chain A, X-ray Co-crystal Structure Of Glycogen Synthase Kinase
3beta In Complex With An Inhibitor
pdb|3F7Z|B Chain B, X-ray Co-crystal Structure Of Glycogen Synthase Kinase
3beta In Complex With An Inhibitor
Length = 350
Score = 51.6 bits (122), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 61/207 (29%), Positives = 96/207 (46%), Gaps = 25/207 (12%)
Query: 338 LVGKGGHSHVYRGCLPDGKELAVKILKPSEDVLKEFAS-EIEIITALHHRNIISLFGFCF 396
++G G VY+ L D EL V I K +D K F + E++I+ L H NI+ L F +
Sbjct: 28 VIGNGSFGVVYQAKLCDSGEL-VAIKKVLQD--KRFKNRELQIMRKLDHCNIVRLRYFFY 84
Query: 397 ------EDNNLLLVYDFLSRGSLEENLHGNK-KDGNAFGWTERYKVAVGVAEALDYLHNS 449
++ L LV D++ H ++ K + + Y + +L Y+H+
Sbjct: 85 SSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQL--FRSLAYIHSF 142
Query: 450 CEQPVIHKDVKSSNILLSDDFEP-QLSDFGLASWLSTSSSHLT--CTDVAGTFGYLAPEY 506
+ H+D+K N+LL D +L DFG A L +++ C+ Y APE
Sbjct: 143 G---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXICSRY-----YRAPEL 194
Query: 507 -FMHGKVSEKIDVYAFGIVLLELLSGK 532
F + IDV++ G VL ELL G+
Sbjct: 195 IFGATDYTSSIDVWSAGCVLAELLLGQ 221
>pdb|3ZDI|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide And Inhibitor 7d
Length = 350
Score = 51.6 bits (122), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 61/207 (29%), Positives = 96/207 (46%), Gaps = 25/207 (12%)
Query: 338 LVGKGGHSHVYRGCLPDGKELAVKILKPSEDVLKEFAS-EIEIITALHHRNIISLFGFCF 396
++G G VY+ L D EL V I K +D K F + E++I+ L H NI+ L F +
Sbjct: 27 VIGNGSFGVVYQAKLCDSGEL-VAIKKVLQD--KRFKNRELQIMRKLDHCNIVRLRYFFY 83
Query: 397 ------EDNNLLLVYDFLSRGSLEENLHGNK-KDGNAFGWTERYKVAVGVAEALDYLHNS 449
++ L LV D++ H ++ K + + Y + +L Y+H+
Sbjct: 84 SSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQL--FRSLAYIHSF 141
Query: 450 CEQPVIHKDVKSSNILLSDDFEP-QLSDFGLASWLSTSSSHLT--CTDVAGTFGYLAPEY 506
+ H+D+K N+LL D +L DFG A L +++ C+ Y APE
Sbjct: 142 G---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXICSRY-----YRAPEL 193
Query: 507 -FMHGKVSEKIDVYAFGIVLLELLSGK 532
F + IDV++ G VL ELL G+
Sbjct: 194 IFGATDYTSSIDVWSAGCVLAELLLGQ 220
>pdb|3F88|A Chain A, Glycogen Synthase Kinase 3beta Inhibitor Complex
pdb|3F88|B Chain B, Glycogen Synthase Kinase 3beta Inhibitor Complex
Length = 349
Score = 51.6 bits (122), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 61/207 (29%), Positives = 94/207 (45%), Gaps = 25/207 (12%)
Query: 338 LVGKGGHSHVYRGCLPDGKELAVKILKPSEDVLKEFAS-EIEIITALHHRNIISLFGFCF 396
++G G VY+ L D EL V I K +D K F + E++I+ L H NI+ L F +
Sbjct: 27 VIGNGSFGVVYQAKLCDSGEL-VAIKKVLQD--KRFKNRELQIMRKLDHCNIVRLRYFFY 83
Query: 397 EDNN------LLLVYDFLSRGSLEENLHGNK-KDGNAFGWTERYKVAVGVAEALDYLHNS 449
L LV D++ H ++ K + + Y + +L Y+H+
Sbjct: 84 SSGEKKDVVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQL--FRSLAYIHSF 141
Query: 450 CEQPVIHKDVKSSNILLSDDFEP-QLSDFGLASWLSTSSSHLT--CTDVAGTFGYLAPEY 506
+ H+D+K N+LL D +L DFG A L +++ C+ Y APE
Sbjct: 142 G---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXICSRY-----YRAPEL 193
Query: 507 -FMHGKVSEKIDVYAFGIVLLELLSGK 532
F + IDV++ G VL ELL G+
Sbjct: 194 IFGATDYTSSIDVWSAGCVLAELLLGQ 220
>pdb|3SD0|A Chain A, Identification Of A Glycogen Synthase Kinase-3b Inhibitor
That Attenuates Hyperactivity In Clock Mutant Mice
pdb|3SD0|B Chain B, Identification Of A Glycogen Synthase Kinase-3b Inhibitor
That Attenuates Hyperactivity In Clock Mutant Mice
pdb|4B7T|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide And Leucettine L4
Length = 350
Score = 51.6 bits (122), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 61/207 (29%), Positives = 96/207 (46%), Gaps = 25/207 (12%)
Query: 338 LVGKGGHSHVYRGCLPDGKELAVKILKPSEDVLKEFAS-EIEIITALHHRNIISLFGFCF 396
++G G VY+ L D EL V I K +D K F + E++I+ L H NI+ L F +
Sbjct: 27 VIGNGSFGVVYQAKLCDSGEL-VAIKKVLQD--KRFKNRELQIMRKLDHCNIVRLRYFFY 83
Query: 397 ------EDNNLLLVYDFLSRGSLEENLHGNK-KDGNAFGWTERYKVAVGVAEALDYLHNS 449
++ L LV D++ H ++ K + + Y + +L Y+H+
Sbjct: 84 SSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQL--FRSLAYIHSF 141
Query: 450 CEQPVIHKDVKSSNILLSDDFEP-QLSDFGLASWLSTSSSHLT--CTDVAGTFGYLAPEY 506
+ H+D+K N+LL D +L DFG A L +++ C+ Y APE
Sbjct: 142 G---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICSRY-----YRAPEL 193
Query: 507 -FMHGKVSEKIDVYAFGIVLLELLSGK 532
F + IDV++ G VL ELL G+
Sbjct: 194 IFGATDYTSSIDVWSAGCVLAELLLGQ 220
>pdb|3KVX|A Chain A, Jnk3 Bound To Aminopyrimidine Inhibitor, Sr-3562
Length = 364
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 43/166 (25%), Positives = 78/166 (46%), Gaps = 15/166 (9%)
Query: 371 KEFASEIEIITALHHRNIISLFGFCFEDNNLLLVYD-FLSRGSLEENLHG---NKKDGNA 426
K E+ ++ ++H+NIISL L D +L ++ NL + D
Sbjct: 68 KRAYRELVLMKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLXQVIQMELDHER 127
Query: 427 FGWTERYKVAVGVAEALDYLHNSCEQPVIHKDVKSSNILLSDDFEPQLSDFGLASWLSTS 486
+ Y++ G+ +LH++ +IH+D+K SNI++ D ++ DFGLA T+
Sbjct: 128 MSYL-LYQMLXGIK----HLHSAG---IIHRDLKPSNIVVKSDXTLKILDFGLA---RTA 176
Query: 487 SSHLTCTDVAGTFGYLAPEYFMHGKVSEKIDVYAFGIVLLELLSGK 532
+ T T Y APE + E +D+++ G ++ E++ K
Sbjct: 177 GTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHK 222
>pdb|3GC9|A Chain A, The Structure Of P38beta C119s, C162s In Complex With A
Dihydroquinazolinone Inhibitor
pdb|3GC9|B Chain B, The Structure Of P38beta C119s, C162s In Complex With A
Dihydroquinazolinone Inhibitor
Length = 370
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 61/228 (26%), Positives = 105/228 (46%), Gaps = 34/228 (14%)
Query: 323 YQELLSATSNFLPEYL-----VGKGGHSHV---YRGCLPDGKELAVKIL-KPSEDVL--K 371
Y++ L+ T +P+ L VG G + V Y L +++AVK L +P + ++ +
Sbjct: 15 YRQELNKTVWEVPQRLQGLRPVGSGAYGSVCSAYDARL--RQKVAVKKLSRPFQSLIHAR 72
Query: 372 EFASEIEIITALHHRNIISLFGFCFEDNNLLLVYDFLSRGSLEENLHG----NKKDGNAF 427
E+ ++ L H N+I L + + DF S L L G N A
Sbjct: 73 RTYRELRLLKHLKHENVIGLLDVFTPATS---IEDF-SEVYLVTTLMGADLNNIVKSQAL 128
Query: 428 GWTERYKVAVGVAEALDYLHNSCEQPVIHKDVKSSNILLSDDFEPQLSDFGLASWLSTSS 487
+ + L Y+H++ +IH+D+K SN+ +++D E ++ DFGLA
Sbjct: 129 SDEHVQFLVYQLLRGLKYIHSAG---IIHRDLKPSNVAVNEDSELRILDFGLA-----RQ 180
Query: 488 SHLTCTDVAGTFGYLAPEY---FMHGKVSEKIDVYAFGIVLLELLSGK 532
+ T T Y APE +MH ++ +D+++ G ++ ELL GK
Sbjct: 181 ADEEMTGYVATRWYRAPEIMLNWMH--YNQTVDIWSVGCIMAELLQGK 226
>pdb|1UNG|A Chain A, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNG|B Chain B, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNH|A Chain A, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNH|B Chain B, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNL|A Chain A, Structural Mechanism For The Inhibition Of Cd5-P25 From
The Roscovitine, Aloisine And Indirubin.
pdb|1UNL|B Chain B, Structural Mechanism For The Inhibition Of Cd5-P25 From
The Roscovitine, Aloisine And Indirubin.
pdb|3O0G|A Chain A, Crystal Structure Of Cdk5:p25 In Complex With An Atp
Analogue
pdb|3O0G|B Chain B, Crystal Structure Of Cdk5:p25 In Complex With An Atp
Analogue
Length = 292
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 50/207 (24%), Positives = 93/207 (44%), Gaps = 16/207 (7%)
Query: 339 VGKGGHSHVYRGCLPDGKELA----VKILKPSEDVLKEFASEIEIITALHHRNIISLFGF 394
+G+G + V++ + E+ V++ E V EI ++ L H+NI+ L
Sbjct: 10 IGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNIVRLHDV 69
Query: 395 CFEDNNLLLVYDFLSRGSLEENLHGNKKDGNAFGWTERYK-VAVGVAEALDYLHNSCEQP 453
D L LV++F +++L N E K + + L + H+ +
Sbjct: 70 LHSDKKLTLVFEFC-----DQDLKKYFDSCNGDLDPEIVKSFLFQLLKGLGFCHS---RN 121
Query: 454 VIHKDVKSSNILLSDDFEPQLSDFGLASWLSTSSSHLTCTDVAGTFGYLAPEYFMHGKV- 512
V+H+D+K N+L++ + E +L++FGLA + V T Y P+ K+
Sbjct: 122 VLHRDLKPQNLLINRNGELKLANFGLARAFGIPVRCYSAEVV--TLWYRPPDVLFGAKLY 179
Query: 513 SEKIDVYAFGIVLLELLSGKKPINSEN 539
S ID+++ G + EL + +P+ N
Sbjct: 180 STSIDMWSAGCIFAELANAGRPLFPGN 206
>pdb|3FI3|A Chain A, Crystal Structure Of Jnk3 With Indazole Inhibitor, Sr-3737
Length = 364
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 43/166 (25%), Positives = 78/166 (46%), Gaps = 15/166 (9%)
Query: 371 KEFASEIEIITALHHRNIISLFGFCFEDNNLLLVYD-FLSRGSLEENLHG---NKKDGNA 426
K E+ ++ ++H+NIISL L D +L ++ NL + D
Sbjct: 68 KRAYRELVLMKXVNHKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLXQVIQMELDHER 127
Query: 427 FGWTERYKVAVGVAEALDYLHNSCEQPVIHKDVKSSNILLSDDFEPQLSDFGLASWLSTS 486
+ Y++ G+ +LH++ +IH+D+K SNI++ D ++ DFGLA T+
Sbjct: 128 MSYL-LYQMLXGIK----HLHSAG---IIHRDLKPSNIVVKSDXTLKILDFGLA---RTA 176
Query: 487 SSHLTCTDVAGTFGYLAPEYFMHGKVSEKIDVYAFGIVLLELLSGK 532
+ T T Y APE + E +D+++ G ++ E++ K
Sbjct: 177 GTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHK 222
>pdb|3GB2|A Chain A, Gsk3beta Inhibitor Complex
Length = 353
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 61/207 (29%), Positives = 94/207 (45%), Gaps = 25/207 (12%)
Query: 338 LVGKGGHSHVYRGCLPDGKELAVKILKPSEDVLKEFAS-EIEIITALHHRNIISLFGFCF 396
++G G VY+ L D EL V I K +D K F + E++I+ L H NI+ L F +
Sbjct: 31 VIGNGSFGVVYQAKLCDSGEL-VAIKKVLQD--KRFKNRELQIMRKLDHCNIVRLRYFFY 87
Query: 397 EDNN------LLLVYDFLSRGSLEENLHGNK-KDGNAFGWTERYKVAVGVAEALDYLHNS 449
L LV D++ H ++ K + + Y + +L Y+H+
Sbjct: 88 SSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQL--FRSLAYIHSF 145
Query: 450 CEQPVIHKDVKSSNILLSDDFEP-QLSDFGLASWLSTSSSHLT--CTDVAGTFGYLAPEY 506
+ H+D+K N+LL D +L DFG A L +++ C+ Y APE
Sbjct: 146 G---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXICSRY-----YRAPEL 197
Query: 507 -FMHGKVSEKIDVYAFGIVLLELLSGK 532
F + IDV++ G VL ELL G+
Sbjct: 198 IFGATDYTSSIDVWSAGCVLAELLLGQ 224
>pdb|2R9S|A Chain A, C-Jun N-Terminal Kinase 3 With 3,5-Disubstituted Quinoline
Inhibitor
pdb|2R9S|B Chain B, C-Jun N-Terminal Kinase 3 With 3,5-Disubstituted Quinoline
Inhibitor
Length = 356
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 43/166 (25%), Positives = 78/166 (46%), Gaps = 15/166 (9%)
Query: 371 KEFASEIEIITALHHRNIISLFGFCFEDNNLLLVYD-FLSRGSLEENLHG---NKKDGNA 426
K E+ ++ ++H+NIISL L D +L ++ NL + D
Sbjct: 61 KRAYRELVLMKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLXQVIQMELDHER 120
Query: 427 FGWTERYKVAVGVAEALDYLHNSCEQPVIHKDVKSSNILLSDDFEPQLSDFGLASWLSTS 486
+ Y++ G+ +LH++ +IH+D+K SNI++ D ++ DFGLA T+
Sbjct: 121 MSYL-LYQMLXGIK----HLHSAG---IIHRDLKPSNIVVKSDXTLKILDFGLA---RTA 169
Query: 487 SSHLTCTDVAGTFGYLAPEYFMHGKVSEKIDVYAFGIVLLELLSGK 532
+ T T Y APE + E +D+++ G ++ E++ K
Sbjct: 170 GTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHK 215
>pdb|3GP0|A Chain A, Crystal Structure Of Human Mitogen Activated Protein
Kinase 11 (p38 Beta) In Complex With Nilotinib
Length = 348
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 61/228 (26%), Positives = 105/228 (46%), Gaps = 34/228 (14%)
Query: 323 YQELLSATSNFLPEYL-----VGKGGHSHV---YRGCLPDGKELAVKIL-KPSEDVL--K 371
Y++ L+ T +P+ L VG G + V Y L +++AVK L +P + ++ +
Sbjct: 7 YRQELNKTVWEVPQRLQGLRPVGSGAYGSVCSAYDARL--RQKVAVKKLSRPFQSLIHAR 64
Query: 372 EFASEIEIITALHHRNIISLFGFCFEDNNLLLVYDFLSRGSLEENLHG----NKKDGNAF 427
E+ ++ L H N+I L + + DF S L L G N A
Sbjct: 65 RTYRELRLLKHLKHENVIGLLDVFTPATS---IEDF-SEVYLVTTLMGADLNNIVKCQAL 120
Query: 428 GWTERYKVAVGVAEALDYLHNSCEQPVIHKDVKSSNILLSDDFEPQLSDFGLASWLSTSS 487
+ + L Y+H++ +IH+D+K SN+ +++D E ++ DFGLA
Sbjct: 121 SDEHVQFLVYQLLRGLKYIHSAG---IIHRDLKPSNVAVNEDCELRILDFGLA-----RQ 172
Query: 488 SHLTCTDVAGTFGYLAPEY---FMHGKVSEKIDVYAFGIVLLELLSGK 532
+ T T Y APE +MH ++ +D+++ G ++ ELL GK
Sbjct: 173 ADEEMTGYVATRWYRAPEIMLNWMH--YNQTVDIWSVGCIMAELLQGK 218
>pdb|3H9F|A Chain A, Crystal Structure Of Human Dual Specificity Protein Kinase
(Ttk) In Complex With A Pyrimido-Diazepin Ligand
Length = 313
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 52/212 (24%), Positives = 90/212 (42%), Gaps = 25/212 (11%)
Query: 339 VGKGGHSHVYRGCLPDGKELAVKILKPSE---DVLKEFASEIEIITAL--HHRNIISLFG 393
+G GG S V++ + A+K + E L + +EI + L H II L+
Sbjct: 36 IGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYD 95
Query: 394 FCFEDNNLLLVYDFLSRGSLEENLHGNKKDGNAFGWTERYKVAVGVAEALDYLHNSCEQP 453
+ D + +V + G+++ N KK + W ER + EA+ +H +
Sbjct: 96 YEITDQYIYMV---MECGNIDLN-SWLKKKKSIDPW-ERKSYWKNMLEAVHTIH---QHG 147
Query: 454 VIHKDVKSSNILLSDDFEPQLSDFGLASWLSTSSSHLTCTDVAGTFGYLAPEYFMHGKVS 513
++H D+K +N L+ D +L DFG+A+ + + GT Y+ PE S
Sbjct: 148 IVHSDLKPANFLIVDGML-KLIDFGIANQMQPDXXXVVKDSQVGTVNYMPPEAIKDMSSS 206
Query: 514 EK-----------IDVYAFGIVLLELLSGKKP 534
+ DV++ G +L + GK P
Sbjct: 207 RENGKSKSKISPKSDVWSLGCILYYMTYGKTP 238
>pdb|3MH2|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3O8U|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 52/205 (25%), Positives = 97/205 (47%), Gaps = 25/205 (12%)
Query: 339 VGKGGHSHVYRGC-LPDGKELAVKIL-KPSEDVL--KEFASEIEIITALHHRNIISLFGF 394
VG G + V G +AVK L +P + ++ K E+ ++ + H N+I L
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 89
Query: 395 CF------EDNNLLLVYDFLSRGSLEENLHGNKKDGNAFGWTERYKVAVGVAEALDYLHN 448
E N++ LV + G+ N+ +K + Y++ G L Y+H+
Sbjct: 90 FTPARSLEEFNDVYLVTHLM--GADLNNIVKCQKLTDDHVQFLIYQILRG----LKYIHS 143
Query: 449 SCEQPVIHKDVKSSNILLSDDFEPQLSDFGLASWLSTSSSHLTCTDVAGTFGYLAPEYFM 508
+ +IH+D+K SN+ +++D E ++ D+GLA T T Y APE +
Sbjct: 144 A---DIIHRDLKPSNLAVNEDCELKILDYGLARHTDDE-----MTGYVATRWYRAPEIML 195
Query: 509 HG-KVSEKIDVYAFGIVLLELLSGK 532
+ ++ +D+++ G ++ ELL+G+
Sbjct: 196 NWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|3QUP|A Chain A, Inhibitor Bound Structure Of The Kinase Domain Of The
Murine Receptor Tyrosine Kinase Tyro3 (Sky)
Length = 323
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 53/228 (23%), Positives = 100/228 (43%), Gaps = 21/228 (9%)
Query: 324 QELLSATSNFLPEYLVGKGGHSHVYRGCLP--DGK--ELAVKILKP----SEDVLKEFAS 375
+++L F ++GKG V L DG ++AVK+LK S D+ +EF
Sbjct: 16 EDVLIPEQQFTLGRMLGKGEFGSVREAQLKQEDGSFVKVAVKMLKADIIASSDI-EEFLR 74
Query: 376 EIEIITALHHRNIISLFGFCFEDNNL------LLVYDFLSRGSLEENLHGNKKDGNAFGW 429
E + H ++ L G +++ F+ G L L ++ N F
Sbjct: 75 EAACMKEFDHPHVAKLVGVSLRSRAKGRLPIPMVILPFMKHGDLHAFLLASRIGENPFNL 134
Query: 430 TER--YKVAVGVAEALDYLHNSCEQPVIHKDVKSSNILLSDDFEPQLSDFGLASWLSTSS 487
+ + V +A ++YL + + IH+D+ + N +L++D ++DFGL+ + +
Sbjct: 135 PLQTLVRFMVDIACGMEYLSS---RNFIHRDLAARNCMLAEDMTVCVADFGLSRKIYSGD 191
Query: 488 SHLTCTDVAGTFGYLAPEYFMHGKVSEKIDVYAFGIVLLELLS-GKKP 534
+ +LA E + DV+AFG+ + E+++ G+ P
Sbjct: 192 YYRQGCASKLPVKWLALESLADNLYTVHSDVWAFGVTMWEIMTRGQTP 239
>pdb|3R1N|A Chain A, Mk3 Kinase Bound To Compound 5b
pdb|3SHE|A Chain A, Novel Atp-Competitive Mk2 Inhibitors With Potent
Biochemical And Cell- Based Activity Throughout The
Series
Length = 317
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 44/187 (23%), Positives = 83/187 (44%), Gaps = 13/187 (6%)
Query: 355 GKELAVKILKPSEDVLKEFASEIEIITALHHRNIISLFGFCFEDNN-LLLVYDFLSRGSL 413
G++ A+K+L S +E + H I+ ++ LL++ + + G L
Sbjct: 35 GQKCALKLLYDSPKARQEVDHHWQASGGPHIVCILDVYENMHHGKRCLLIIMECMEGGEL 94
Query: 414 EENLHGNKKDGNAFGWTERYKVAVGVAEALDYLHNSCEQPVIHKDVKSSNILLSD---DF 470
+ ++ AF E ++ + A+ +LH+ + H+DVK N+L + D
Sbjct: 95 FSRI--QERGDQAFTEREAAEIMRDIGTAIQFLHS---HNIAHRDVKPENLLYTSKEKDA 149
Query: 471 EPQLSDFGLASWLSTSSSHLTCTDVAGTFGYLAPEYFMHGKVSEKIDVYAFGIVLLELLS 530
+L+DFG A + ++ C T Y+APE K + D+++ G+++ LL
Sbjct: 150 VLKLTDFGFAKETTQNALQTPCY----TPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLC 205
Query: 531 GKKPINS 537
G P S
Sbjct: 206 GFPPFYS 212
>pdb|3GC8|A Chain A, The Structure Of P38beta C162s In Complex With A
Dihydroquinazolinone
pdb|3GC8|B Chain B, The Structure Of P38beta C162s In Complex With A
Dihydroquinazolinone
Length = 370
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 31/94 (32%), Positives = 53/94 (56%), Gaps = 13/94 (13%)
Query: 442 ALDYLHNSCEQPVIHKDVKSSNILLSDDFEPQLSDFGLASWLSTSSSHLTCTDVAGTFGY 501
L Y+H++ +IH+D+K SN+ +++D E ++ DFGLA + T T Y
Sbjct: 143 GLKYIHSAG---IIHRDLKPSNVAVNEDSELRILDFGLA-----RQADEEMTGYVATRWY 194
Query: 502 LAPEY---FMHGKVSEKIDVYAFGIVLLELLSGK 532
APE +MH ++ +D+++ G ++ ELL GK
Sbjct: 195 RAPEIMLNWMH--YNQTVDIWSVGCIMAELLQGK 226
>pdb|3ZUV|A Chain A, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Phosphorylated Map Kinase
Erk2
pdb|3ZUV|C Chain C, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Phosphorylated Map Kinase
Erk2
Length = 364
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 30/96 (31%), Positives = 53/96 (55%), Gaps = 5/96 (5%)
Query: 439 VAEALDYLHNSCEQPVIHKDVKSSNILLSDDFEPQLSDFGLASWLSTSSSHL-TCTDVAG 497
+ L Y+H++ V+H+D+K SN+LL+ + ++ DFGLA H +
Sbjct: 137 ILRGLKYIHSAN---VLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLXEXVA 193
Query: 498 TFGYLAPEYFMHGK-VSEKIDVYAFGIVLLELLSGK 532
T Y APE ++ K ++ ID+++ G +L E+LS +
Sbjct: 194 TRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 229
>pdb|3FHR|A Chain A, High Resolution Crystal Structure Of Mitogen-Activated
Protein Kinase-Activated Protein Kinase 3
(Mk3)-Inhibitor Complex
pdb|3FXW|A Chain A, High Resolution Crystal Structure Of Mitogen-Activated
Protein Kinase- Activated Protein Kinase 3INHIBITOR 2
COMPLEX
Length = 336
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 44/187 (23%), Positives = 83/187 (44%), Gaps = 13/187 (6%)
Query: 355 GKELAVKILKPSEDVLKEFASEIEIITALHHRNIISLFGFCFEDNN-LLLVYDFLSRGSL 413
G++ A+K+L S +E + H I+ ++ LL++ + + G L
Sbjct: 54 GQKCALKLLYDSPKARQEVDHHWQASGGPHIVCILDVYENMHHGKRCLLIIMECMEGGEL 113
Query: 414 EENLHGNKKDGNAFGWTERYKVAVGVAEALDYLHNSCEQPVIHKDVKSSNILLSD---DF 470
+ ++ AF E ++ + A+ +LH+ + H+DVK N+L + D
Sbjct: 114 FSRI--QERGDQAFTEREAAEIMRDIGTAIQFLHS---HNIAHRDVKPENLLYTSKEKDA 168
Query: 471 EPQLSDFGLASWLSTSSSHLTCTDVAGTFGYLAPEYFMHGKVSEKIDVYAFGIVLLELLS 530
+L+DFG A + ++ C T Y+APE K + D+++ G+++ LL
Sbjct: 169 VLKLTDFGFAKETTQNALQTPCY----TPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLC 224
Query: 531 GKKPINS 537
G P S
Sbjct: 225 GFPPFYS 231
>pdb|2ERK|A Chain A, Phosphorylated Map Kinase Erk2
Length = 365
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 30/96 (31%), Positives = 53/96 (55%), Gaps = 5/96 (5%)
Query: 439 VAEALDYLHNSCEQPVIHKDVKSSNILLSDDFEPQLSDFGLASWLSTSSSHL-TCTDVAG 497
+ L Y+H++ V+H+D+K SN+LL+ + ++ DFGLA H +
Sbjct: 138 ILRGLKYIHSAN---VLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLXEXVA 194
Query: 498 TFGYLAPEYFMHGK-VSEKIDVYAFGIVLLELLSGK 532
T Y APE ++ K ++ ID+++ G +L E+LS +
Sbjct: 195 TRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 230
>pdb|3FV8|A Chain A, Jnk3 Bound To Piperazine Amide Inhibitor, Sr2774
Length = 355
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 43/166 (25%), Positives = 78/166 (46%), Gaps = 15/166 (9%)
Query: 371 KEFASEIEIITALHHRNIISLFGFCFEDNNLLLVYD-FLSRGSLEENLHG---NKKDGNA 426
K E+ ++ ++H+NIISL L D +L ++ NL + D
Sbjct: 68 KRAYRELVLMKXVNHKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLXQVIQMELDHER 127
Query: 427 FGWTERYKVAVGVAEALDYLHNSCEQPVIHKDVKSSNILLSDDFEPQLSDFGLASWLSTS 486
+ Y++ G+ +LH++ +IH+D+K SNI++ D ++ DFGLA T+
Sbjct: 128 MSYL-LYQMLCGIK----HLHSAG---IIHRDLKPSNIVVKSDXTLKILDFGLA---RTA 176
Query: 487 SSHLTCTDVAGTFGYLAPEYFMHGKVSEKIDVYAFGIVLLELLSGK 532
+ T T Y APE + E +D+++ G ++ E++ K
Sbjct: 177 GTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHK 222
>pdb|3PY3|A Chain A, Crystal Structure Of Phosphorylated P38alpha Map Kinase
Length = 380
Score = 50.8 bits (120), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 48/188 (25%), Positives = 91/188 (48%), Gaps = 24/188 (12%)
Query: 355 GKELAVKIL-KPSEDVL--KEFASEIEIITALHHRNIISLFGFCF------EDNNLLLVY 405
G +AVK L +P + ++ K E+ ++ + H N+I L E N++ LV
Sbjct: 67 GHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVT 126
Query: 406 DFLSRGSLEENLHGNKKDGNAFGWTERYKVAVGVAEALDYLHNSCEQPVIHKDVKSSNIL 465
+ G+ N+ +K + Y++ G L Y+H++ +IH+D+K SN+
Sbjct: 127 HLM--GADLNNIVKCQKLTDDHVQFLIYQILRG----LKYIHSA---DIIHRDLKPSNLA 177
Query: 466 LSDDFEPQLSDFGLASWLSTSSSHLTCTDVAGTFGYLAPEYFMHG-KVSEKIDVYAFGIV 524
+++D E ++ DFGLA T Y APE ++ ++ +D+++ G +
Sbjct: 178 VNEDCELKILDFGLARHTDDE-----MXGXVATRWYRAPEIMLNWMHYNQTVDIWSVGCI 232
Query: 525 LLELLSGK 532
+ ELL+G+
Sbjct: 233 MAELLTGR 240
>pdb|2O0U|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-{3-Cyano-6-[3-(1-
Piperidinyl)propanoyl]-4,5,6,7-Tetrahydrothieno[2,
3-C]pyridin-2-Yl}- 1-Naphthalenecarboxamide
pdb|2O2U|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-(3-Cyano-4,5,6,7-
Tetrahydro-1-Benzothien-2-Yl)-2-Fluorobenzamide
pdb|2ZDT|A Chain A, Crystal Structure Of Human Jnk3 Complexed With An
Isoquinolone Inhibitor
pdb|2ZDU|A Chain A, Crystal Structure Of Human Jnk3 Complexed With An
Isoquinolone Inhibitor
pdb|3DA6|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-(3-Methyl-
4-(3-(2-(Methylamino)pyrimidin-4-Yl)pyridin-2-Yloxy)
Naphthalen-1-Yl)-1h-Benzo[d]imidazol-2-Amine
pdb|2WAJ|A Chain A, Crystal Structure Of Human Jnk3 Complexed With A
1-Aryl-3,4- Dihydroisoquinoline Inhibitor
pdb|3V6R|A Chain A, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6R|B Chain B, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6S|A Chain A, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6S|B Chain B, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
Length = 364
Score = 50.8 bits (120), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 43/166 (25%), Positives = 78/166 (46%), Gaps = 15/166 (9%)
Query: 371 KEFASEIEIITALHHRNIISLFGFCFEDNNLLLVYD-FLSRGSLEENLHG---NKKDGNA 426
K E+ ++ ++H+NIISL L D +L ++ NL + D
Sbjct: 68 KRAYRELVLMKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIQMELDHER 127
Query: 427 FGWTERYKVAVGVAEALDYLHNSCEQPVIHKDVKSSNILLSDDFEPQLSDFGLASWLSTS 486
+ Y++ G+ +LH++ +IH+D+K SNI++ D ++ DFGLA T+
Sbjct: 128 MSYL-LYQMLCGIK----HLHSAG---IIHRDLKPSNIVVKSDCTLKILDFGLA---RTA 176
Query: 487 SSHLTCTDVAGTFGYLAPEYFMHGKVSEKIDVYAFGIVLLELLSGK 532
+ T T Y APE + E +D+++ G ++ E++ K
Sbjct: 177 GTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHK 222
>pdb|3OXI|A Chain A, Design And Synthesis Of Disubstituted Thiophene And
Thiazole Based Inhibitors Of Jnk For The Treatment Of
Neurodegenerative Diseases
pdb|3OY1|A Chain A, Highly Selective C-Jun N-Terminal Kinase (Jnk) 2 And 3
Inhibitors With In Vitro Cns-Like Pharmacokinetic
Properties
Length = 362
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 43/166 (25%), Positives = 78/166 (46%), Gaps = 15/166 (9%)
Query: 371 KEFASEIEIITALHHRNIISLFGFCFEDNNLLLVYD-FLSRGSLEENLHG---NKKDGNA 426
K E+ ++ ++H+NIISL L D +L ++ NL + D
Sbjct: 67 KRAYRELVLMKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIQMELDHER 126
Query: 427 FGWTERYKVAVGVAEALDYLHNSCEQPVIHKDVKSSNILLSDDFEPQLSDFGLASWLSTS 486
+ Y++ G+ +LH++ +IH+D+K SNI++ D ++ DFGLA T+
Sbjct: 127 MSYL-LYQMLCGIK----HLHSAG---IIHRDLKPSNIVVKSDCTLKILDFGLA---RTA 175
Query: 487 SSHLTCTDVAGTFGYLAPEYFMHGKVSEKIDVYAFGIVLLELLSGK 532
+ T T Y APE + E +D+++ G ++ E++ K
Sbjct: 176 GTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHK 221
>pdb|2ZMD|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain T686a
Mutant In Complex With Sp600125 Inhibitor
Length = 390
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 52/214 (24%), Positives = 94/214 (43%), Gaps = 27/214 (12%)
Query: 339 VGKGGHSHVYRGCLPDGKEL-AVKILKPSE---DVLKEFASEIEIITAL--HHRNIISLF 392
+G GG S V++ L + K++ A+K + E L + +EI + L H II L+
Sbjct: 64 IGSGGSSKVFQ-VLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLY 122
Query: 393 GFCFEDNNLLLVYDFLSRGSLEENLHGNKKDGNAFGWTERYKVAVGVAEALDYLHNSCEQ 452
+ D + +V + G+++ N KK + ER + EA+ +H +
Sbjct: 123 DYEITDQYIYMV---MECGNIDLNSWLKKK--KSIDPWERKSYWKNMLEAVHTIH---QH 174
Query: 453 PVIHKDVKSSNILLSDDFEPQLSDFGLASWLSTSSSHLTCTDVAGTFGYLAPEYFMHGKV 512
++H D+K +N L+ D +L DFG+A+ + ++ + G Y+ PE
Sbjct: 175 GIVHSDLKPANFLIVDGM-LKLIDFGIANQMQPDTTSVVKDSQVGAVNYMPPEAIKDMSS 233
Query: 513 SEK-----------IDVYAFGIVLLELLSGKKPI 535
S + DV++ G +L + GK P
Sbjct: 234 SRENGKSKSKISPKSDVWSLGCILYYMTYGKTPF 267
>pdb|1PMN|A Chain A, Crystal Structure Of Jnk3 In Complex With An Imidazole-
Pyrimidine Inhibitor
pdb|1PMQ|A Chain A, The Structure Of Jnk3 In Complex With An Imidazole-
Pyrimidine Inhibitor
pdb|1PMU|A Chain A, The Crystal Structure Of Jnk3 In Complex With A
Phenantroline Inhibitor
pdb|1PMV|A Chain A, The Structure Of Jnk3 In Complex With A
Dihydroanthrapyrazole Inhibitor
Length = 364
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 43/166 (25%), Positives = 78/166 (46%), Gaps = 15/166 (9%)
Query: 371 KEFASEIEIITALHHRNIISLFGFCFEDNNLLLVYD-FLSRGSLEENLHG---NKKDGNA 426
K E+ ++ ++H+NIISL L D +L ++ NL + D
Sbjct: 69 KRAYRELVLMKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIQMELDHER 128
Query: 427 FGWTERYKVAVGVAEALDYLHNSCEQPVIHKDVKSSNILLSDDFEPQLSDFGLASWLSTS 486
+ Y++ G+ +LH++ +IH+D+K SNI++ D ++ DFGLA T+
Sbjct: 129 MSYL-LYQMLCGIK----HLHSAG---IIHRDLKPSNIVVKSDCTLKILDFGLA---RTA 177
Query: 487 SSHLTCTDVAGTFGYLAPEYFMHGKVSEKIDVYAFGIVLLELLSGK 532
+ T T Y APE + E +D+++ G ++ E++ K
Sbjct: 178 GTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHK 223
>pdb|3PTG|A Chain A, Design And Synthesis Of A Novel, Orally Efficacious
Tri-Substituted Thiophene Based Jnk Inhibitor
Length = 363
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 43/166 (25%), Positives = 78/166 (46%), Gaps = 15/166 (9%)
Query: 371 KEFASEIEIITALHHRNIISLFGFCFEDNNLLLVYD-FLSRGSLEENLHG---NKKDGNA 426
K E+ ++ ++H+NIISL L D +L ++ NL + D
Sbjct: 68 KRAYRELVLMKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIQMELDHER 127
Query: 427 FGWTERYKVAVGVAEALDYLHNSCEQPVIHKDVKSSNILLSDDFEPQLSDFGLASWLSTS 486
+ Y++ G+ +LH++ +IH+D+K SNI++ D ++ DFGLA T+
Sbjct: 128 MSYL-LYQMLCGIK----HLHSAG---IIHRDLKPSNIVVKSDCTLKILDFGLA---RTA 176
Query: 487 SSHLTCTDVAGTFGYLAPEYFMHGKVSEKIDVYAFGIVLLELLSGK 532
+ T T Y APE + E +D+++ G ++ E++ K
Sbjct: 177 GTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHK 222
>pdb|2OK1|A Chain A, Crystal Structure Of Jnk3 Bound To N-Benzyl-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|2P33|A Chain A, Synthesis And Sar Of Aminopyrimidines As Novel C-Jun N-
Terminal Kinase (Jnk) Inhibitors
pdb|3CGF|A Chain A, Irak-4 Inhibitors (Part Ii)- A Structure Based Assessment
Of Imidazo[1,2 A]pyridine Binding
pdb|3CGO|A Chain A, Irak-4 Inhibitors (Part Ii)- A Structure Based Assessment
Of Imidazo[1,2 A]pyridine Binding
pdb|3G90|X Chain X, Jnk-3 Bound To
(Z)-5-Fluoro-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)
Methyl)-3-(Hydroxyimino)indolin-2-One
pdb|3G9N|A Chain A, Jnk3 Bound To
(Z)-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)methyl)-3-
(Hydroxyimino)-4-Phenylindolin-2-One
pdb|3G9L|X Chain X, Jnk3 Bound To
(Z)-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)methyl)-3-
(Hydroxyimino)-4-Styrylindolin-2-One
Length = 365
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 43/166 (25%), Positives = 78/166 (46%), Gaps = 15/166 (9%)
Query: 371 KEFASEIEIITALHHRNIISLFGFCFEDNNLLLVYD-FLSRGSLEENLHG---NKKDGNA 426
K E+ ++ ++H+NIISL L D +L ++ NL + D
Sbjct: 69 KRAYRELVLMKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIQMELDHER 128
Query: 427 FGWTERYKVAVGVAEALDYLHNSCEQPVIHKDVKSSNILLSDDFEPQLSDFGLASWLSTS 486
+ Y++ G+ +LH++ +IH+D+K SNI++ D ++ DFGLA T+
Sbjct: 129 MSYL-LYQMLCGIK----HLHSAG---IIHRDLKPSNIVVKSDCTLKILDFGLA---RTA 177
Query: 487 SSHLTCTDVAGTFGYLAPEYFMHGKVSEKIDVYAFGIVLLELLSGK 532
+ T T Y APE + E +D+++ G ++ E++ K
Sbjct: 178 GTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHK 223
>pdb|4FVR|A Chain A, Crystal Structure Of The Jak2 Pseudokinase Domain Mutant
V617f (Mg- Atp-Bound Form)
Length = 289
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 61/260 (23%), Positives = 122/260 (46%), Gaps = 25/260 (9%)
Query: 339 VGKGGHSHVYRGCLPD--------GKELAVKIL-KPSEDVLKEFASEIEIITALHHRNII 389
+G+G + +++G + E+ +K+L K + + F +++ L H++++
Sbjct: 16 LGQGTFTKIFKGVRREVGDYGQLHETEVLLKVLDKAHRNYSESFFEAASMMSKLSHKHLV 75
Query: 390 SLFGFCFEDNNLLLVYDFLSRGSLEENLHGNKKDGNAFGWTERYKVAVGVAEALDYLHNS 449
+G CF + +LV +F+ GSL+ L KK+ N + +VA +A A+ +L
Sbjct: 76 LNYGVCFCGDENILVQEFVKFGSLDTYL---KKNKNCINILWKLEVAKQLAWAMHFLE-- 130
Query: 450 CEQPVIHKDVKSSNILL--SDDFEPQLSDFGLASWLSTSSSHLTCTDVAGTFGYLAPEYF 507
E +IH +V + NILL +D + F S S + L + ++ PE
Sbjct: 131 -ENTLIHGNVCAKNILLIREEDRKTGNPPFIKLSDPGISITVLPKDILQERIPWVPPECI 189
Query: 508 MHGK-VSEKIDVYAFGIVLLELLS-GKKPINSENPKGQESLVMWAK----PILKDGKVSQ 561
+ K ++ D ++FG L E+ S G KP+++ + Q L + P K +++
Sbjct: 190 ENPKNLNLATDKWSFGTTLWEICSGGDKPLSALD--SQRKLQFYEDRHQLPAPKAAELAN 247
Query: 562 LLDPSLDTDYDNDQIERMVL 581
L++ +D + D+ R ++
Sbjct: 248 LINNCMDYEPDHRPSFRAII 267
>pdb|3VUI|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M2 In Map
Kinase Jnk1
Length = 370
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 27/90 (30%), Positives = 49/90 (54%), Gaps = 6/90 (6%)
Query: 442 ALDYLHNSCEQPVIHKDVKSSNILLSDDFEPQLSDFGLASWLSTSSSHLTCTDVAGTFGY 501
+ +LH++ +IH+D+K SNI++ D ++ DFGLA T+ + T T Y
Sbjct: 138 GIKHLHSAG---IIHRDLKPSNIVVKSDATLKILDFGLA---RTAGTSFMMTPYVVTRYY 191
Query: 502 LAPEYFMHGKVSEKIDVYAFGIVLLELLSG 531
APE + E +D+++ G ++ E++ G
Sbjct: 192 RAPEVILGMGYKENVDIWSVGCIMGEMIKG 221
>pdb|4H36|A Chain A, Crystal Structure Of Jnk3 In Complex With Atf2 Peptide
pdb|4H39|A Chain A, Crystal Structure Of Jnk3 In Complex With Jip1 Peptide
pdb|4H3B|A Chain A, Crystal Structure Of Jnk3 In Complex With Sab Peptide
pdb|4H3B|C Chain C, Crystal Structure Of Jnk3 In Complex With Sab Peptide
Length = 356
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 43/166 (25%), Positives = 78/166 (46%), Gaps = 15/166 (9%)
Query: 371 KEFASEIEIITALHHRNIISLFGFCFEDNNLLLVYD-FLSRGSLEENLHG---NKKDGNA 426
K E+ ++ ++H+NIISL L D +L ++ NL + D
Sbjct: 62 KRAYRELVLMKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIQMELDHER 121
Query: 427 FGWTERYKVAVGVAEALDYLHNSCEQPVIHKDVKSSNILLSDDFEPQLSDFGLASWLSTS 486
+ Y++ G+ +LH++ +IH+D+K SNI++ D ++ DFGLA T+
Sbjct: 122 MSYL-LYQMLCGIK----HLHSAG---IIHRDLKPSNIVVKSDCTLKILDFGLA---RTA 170
Query: 487 SSHLTCTDVAGTFGYLAPEYFMHGKVSEKIDVYAFGIVLLELLSGK 532
+ T T Y APE + E +D+++ G ++ E++ K
Sbjct: 171 GTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHK 216
>pdb|3ZUT|A Chain A, The Structure Of Ost1 (D160a) Kinase
pdb|3ZUT|B Chain B, The Structure Of Ost1 (D160a) Kinase
Length = 362
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 48/186 (25%), Positives = 77/186 (41%), Gaps = 10/186 (5%)
Query: 358 LAVKILKPSEDVLKEFASEIEIITALHHRNIISLFGFCFEDNNLLLVYDFLSRGSLEENL 417
+AVK ++ E + + EI +L H NI+ +L +V ++ S G L E +
Sbjct: 47 VAVKYIERGEKIDENVKREIINHRSLRHPNIVRFKEVILTPTHLAIVMEYASGGELFERI 106
Query: 418 HGNKKDGNAFGWTERYKVAVGVAEALDYLHNSCEQPVIHKDVKSSNILLSDDFEPQLSDF 477
+ F E + + Y H V H+D+K N LL P+L
Sbjct: 107 ----CNAGRFSEDEARFFFQQLISGVSYCH---AMQVCHRDLKLENTLLDGSPAPRLKIC 159
Query: 478 GLASWLSTSSSHLTCTDVAGTFGYLAPEYFMHGKVSEKI-DVYAFGIVLLELLSGKKPI- 535
+ +S H GT Y+APE + + K+ DV++ G+ L +L G P
Sbjct: 160 AFG-YSKSSVLHSQPKSTVGTPAYIAPEVLLKKEYDGKVADVWSCGVTLYVMLVGAYPFE 218
Query: 536 NSENPK 541
+ E PK
Sbjct: 219 DPEEPK 224
>pdb|3VUH|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M3 In Map
Kinase Jnk1
Length = 370
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 27/90 (30%), Positives = 49/90 (54%), Gaps = 6/90 (6%)
Query: 442 ALDYLHNSCEQPVIHKDVKSSNILLSDDFEPQLSDFGLASWLSTSSSHLTCTDVAGTFGY 501
+ +LH++ +IH+D+K SNI++ D ++ DFGLA T+ + T T Y
Sbjct: 138 GIKHLHSAG---IIHRDLKPSNIVVKSDATLKILDFGLA---RTAGTSFMMTPYVVTRYY 191
Query: 502 LAPEYFMHGKVSEKIDVYAFGIVLLELLSG 531
APE + E +D+++ G ++ E++ G
Sbjct: 192 RAPEVILGMGYKENVDIWSVGCIMGEMIKG 221
>pdb|3TTJ|A Chain A, Crystal Structure Of Jnk3 Complexed With Cc-359, A Jnk
Inhibitor For The Prevention Of Ischemia-Reperfusion
Injury
pdb|3TTI|A Chain A, Crystal Structure Of Jnk3 Complexed With Cc-930, An Orally
Active Anti-Fibrotic Jnk Inhibitor
Length = 464
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 43/166 (25%), Positives = 78/166 (46%), Gaps = 15/166 (9%)
Query: 371 KEFASEIEIITALHHRNIISLFGFCFEDNNLLLVYD-FLSRGSLEENLHG---NKKDGNA 426
K E+ ++ ++H+NIISL L D +L ++ NL + D
Sbjct: 106 KRAYRELVLMKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIQMELDHER 165
Query: 427 FGWTERYKVAVGVAEALDYLHNSCEQPVIHKDVKSSNILLSDDFEPQLSDFGLASWLSTS 486
+ Y++ G+ +LH++ +IH+D+K SNI++ D ++ DFGLA T+
Sbjct: 166 MSYL-LYQMLCGIK----HLHSAG---IIHRDLKPSNIVVKSDCTLKILDFGLA---RTA 214
Query: 487 SSHLTCTDVAGTFGYLAPEYFMHGKVSEKIDVYAFGIVLLELLSGK 532
+ T T Y APE + E +D+++ G ++ E++ K
Sbjct: 215 GTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHK 260
>pdb|3VUG|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M2 In Map
Kinase Jnk1
Length = 370
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 27/90 (30%), Positives = 49/90 (54%), Gaps = 6/90 (6%)
Query: 442 ALDYLHNSCEQPVIHKDVKSSNILLSDDFEPQLSDFGLASWLSTSSSHLTCTDVAGTFGY 501
+ +LH++ +IH+D+K SNI++ D ++ DFGLA T+ + T T Y
Sbjct: 138 GIKHLHSAG---IIHRDLKPSNIVVKSDCTLKILDFGLA---RTAGTSFMMTPYVVTRYY 191
Query: 502 LAPEYFMHGKVSEKIDVYAFGIVLLELLSG 531
APE + E +D+++ G ++ E++ G
Sbjct: 192 RAPEVILGMGYKENVDIWSVGCIMGEMIKG 221
>pdb|3VUD|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M1 In Map
Kinase Jnk1
Length = 370
Score = 50.4 bits (119), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 27/90 (30%), Positives = 49/90 (54%), Gaps = 6/90 (6%)
Query: 442 ALDYLHNSCEQPVIHKDVKSSNILLSDDFEPQLSDFGLASWLSTSSSHLTCTDVAGTFGY 501
+ +LH++ +IH+D+K SNI++ D ++ DFGLA T+ + T T Y
Sbjct: 138 GIKHLHSAG---IIHRDLKPSNIVVKSDCTLKILDFGLA---RTAGTSFMMTPYVVTRYY 191
Query: 502 LAPEYFMHGKVSEKIDVYAFGIVLLELLSG 531
APE + E +D+++ G ++ E++ G
Sbjct: 192 RAPEVILGMGYKENVDIWSVGCIMGEMIKG 221
>pdb|2XRW|A Chain A, Linear Binding Motifs For Jnk And For Calcineurin
Antagonistically Control The Nuclear Shuttling Of Nfat4
Length = 371
Score = 50.4 bits (119), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 27/90 (30%), Positives = 49/90 (54%), Gaps = 6/90 (6%)
Query: 442 ALDYLHNSCEQPVIHKDVKSSNILLSDDFEPQLSDFGLASWLSTSSSHLTCTDVAGTFGY 501
+ +LH++ +IH+D+K SNI++ D ++ DFGLA T+ + T T Y
Sbjct: 139 GIKHLHSAG---IIHRDLKPSNIVVKSDCTLKILDFGLA---RTAGTSFMMTPYVVTRYY 192
Query: 502 LAPEYFMHGKVSEKIDVYAFGIVLLELLSG 531
APE + E +D+++ G ++ E++ G
Sbjct: 193 RAPEVILGMGYKENVDIWSVGCIMGEMIKG 222
>pdb|2B1P|A Chain A, Inhibitor Complex Of Jnk3
Length = 355
Score = 50.4 bits (119), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 43/166 (25%), Positives = 78/166 (46%), Gaps = 15/166 (9%)
Query: 371 KEFASEIEIITALHHRNIISLFGFCFEDNNLLLVYD-FLSRGSLEENLHG---NKKDGNA 426
K E+ ++ ++H+NIISL L D +L ++ NL + D
Sbjct: 61 KRAYRELVLMKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIQMELDHER 120
Query: 427 FGWTERYKVAVGVAEALDYLHNSCEQPVIHKDVKSSNILLSDDFEPQLSDFGLASWLSTS 486
+ Y++ G+ +LH++ +IH+D+K SNI++ D ++ DFGLA T+
Sbjct: 121 MSYL-LYQMLCGIK----HLHSAG---IIHRDLKPSNIVVKSDCTLKILDFGLA---RTA 169
Query: 487 SSHLTCTDVAGTFGYLAPEYFMHGKVSEKIDVYAFGIVLLELLSGK 532
+ T T Y APE + E +D+++ G ++ E++ K
Sbjct: 170 GTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHK 215
>pdb|2EXC|X Chain X, Inhibitor Complex Of Jnk3
Length = 356
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 43/166 (25%), Positives = 78/166 (46%), Gaps = 15/166 (9%)
Query: 371 KEFASEIEIITALHHRNIISLFGFCFEDNNLLLVYD-FLSRGSLEENLHG---NKKDGNA 426
K E+ ++ ++H+NIISL L D +L ++ NL + D
Sbjct: 62 KRAYRELVLMKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIQMELDHER 121
Query: 427 FGWTERYKVAVGVAEALDYLHNSCEQPVIHKDVKSSNILLSDDFEPQLSDFGLASWLSTS 486
+ Y++ G+ +LH++ +IH+D+K SNI++ D ++ DFGLA T+
Sbjct: 122 MSYL-LYQMLCGIK----HLHSAG---IIHRDLKPSNIVVKSDCTLKILDFGLA---RTA 170
Query: 487 SSHLTCTDVAGTFGYLAPEYFMHGKVSEKIDVYAFGIVLLELLSGK 532
+ T T Y APE + E +D+++ G ++ E++ K
Sbjct: 171 GTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHK 216
>pdb|1UKH|A Chain A, Structural Basis For The Selective Inhibition Of Jnk1 By
The Scaffolding Protein Jip1 And Sp600125
pdb|1UKI|A Chain A, Structural Basis For The Selective Inhibition Of Jnk1 By
The Scaffolding Protein Jip1 And Sp600125
Length = 369
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 27/90 (30%), Positives = 49/90 (54%), Gaps = 6/90 (6%)
Query: 442 ALDYLHNSCEQPVIHKDVKSSNILLSDDFEPQLSDFGLASWLSTSSSHLTCTDVAGTFGY 501
+ +LH++ +IH+D+K SNI++ D ++ DFGLA T+ + T T Y
Sbjct: 138 GIKHLHSAG---IIHRDLKPSNIVVKSDCTLKILDFGLA---RTAGTSFMMTPYVVTRYY 191
Query: 502 LAPEYFMHGKVSEKIDVYAFGIVLLELLSG 531
APE + E +D+++ G ++ E++ G
Sbjct: 192 RAPEVILGMGYKENVDIWSVGCIMGEMIKG 221
>pdb|1TKI|A Chain A, Autoinhibited Serine Kinase Domain Of The Giant Muscle
Protein Titin
pdb|1TKI|B Chain B, Autoinhibited Serine Kinase Domain Of The Giant Muscle
Protein Titin
Length = 321
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 46/168 (27%), Positives = 75/168 (44%), Gaps = 15/168 (8%)
Query: 376 EIEIITALHHRNIISLFGFCFEDNNLLLVYDFLSRGSLEENLHGNKKDGNAFGWTERYKV 435
EI I+ HRNI+ L L+++++F+S + E + + +AF ER V
Sbjct: 51 EISILNIARHRNILHLHESFESMEELVMIFEFISGLDIFERI-----NTSAFELNEREIV 105
Query: 436 AV--GVAEALDYLHNSCEQPVIHKDVKSSNILLSDDFEP--QLSDFGLASWLSTSSSHLT 491
+ V EAL +LH+ + H D++ NI+ ++ +FG A L +
Sbjct: 106 SYVHQVCEALQFLHS---HNIGHFDIRPENIIYQTRRSSTIKIIEFGQARQLKPGDNFRL 162
Query: 492 CTDVAGTFGYLAPEYFMHGKVSEKIDVYAFGIVLLELLSGKKPINSEN 539
Y APE H VS D+++ G ++ LLSG P +E
Sbjct: 163 LFTAPE---YYAPEVHQHDVVSTATDMWSLGTLVYVLLSGINPFLAET 207
>pdb|4ALU|A Chain A, Benzofuropyrimidinone Inhibitors Of Pim-1
Length = 328
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 43/145 (29%), Positives = 72/145 (49%), Gaps = 26/145 (17%)
Query: 404 VYDFLS-RGSLEENLHGNKKDGNAFGWTERYKVAVGVAEALDYLHNSCEQPVIHKDVKSS 462
++DF++ RG+L+E L +F W V EA+ + HN V+H+D+K
Sbjct: 144 LFDFITERGALQEEL------ARSFFWQ--------VLEAVRHCHNCG---VLHRDIKDE 186
Query: 463 NILLS-DDFEPQLSDFGLASWLSTSSSHLTCTDVAGTFGYLAPEYFMHGKVSEK-IDVYA 520
NIL+ + E +L DFG + L + TD GT Y PE+ + + + V++
Sbjct: 187 NILIDLNRGELKLIDFGSGALLKDT----VYTDFDGTRVYSPPEWIRYHRYHGRSAAVWS 242
Query: 521 FGIVLLELLSGKKPI--NSENPKGQ 543
GI+L +++ G P + E +GQ
Sbjct: 243 LGILLYDMVCGDIPFEHDEEIIRGQ 267
>pdb|2XUU|A Chain A, Crystal Structure Of A Dap-Kinase 1 Mutant
Length = 334
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 39/164 (23%), Positives = 77/164 (46%), Gaps = 14/164 (8%)
Query: 376 EIEIITALHHRNIISLFGFCFEDNNLLLVYDFLSRGSLEENLHGNKKDGNAFGWTERYKV 435
E+ I+ + H N+I+L +++L+ + ++ G L + L + + E +
Sbjct: 64 EVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFL----AEKESLTEEEATEF 119
Query: 436 AVGVAEALDYLHNSCEQPVIHKDVKSSNILLSDDFEPQ----LSDFGLASWLSTSSSHLT 491
+ + YLH+ + H D+K NI+L D P+ + DFGLA + +
Sbjct: 120 LKQILNGVYYLHS---LQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEF-- 174
Query: 492 CTDVAGTFGYLAPEYFMHGKVSEKIDVYAFGIVLLELLSGKKPI 535
++ GT ++APE + + + D+++ G++ LLSG P
Sbjct: 175 -KNIFGTPAFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPF 217
>pdb|4EWQ|A Chain A, Human P38 Alpha Mapk In Complex With A Pyridazine Based
Inhibitor
Length = 383
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 52/205 (25%), Positives = 96/205 (46%), Gaps = 25/205 (12%)
Query: 339 VGKGGHSHVYRGC-LPDGKELAVKIL-KPSEDVL--KEFASEIEIITALHHRNIISLFGF 394
VG G + V G +AVK L +P + ++ K E+ ++ + H N+I L
Sbjct: 53 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 112
Query: 395 CF------EDNNLLLVYDFLSRGSLEENLHGNKKDGNAFGWTERYKVAVGVAEALDYLHN 448
E N++ LV + G+ N+ +K + Y++ G L Y+H+
Sbjct: 113 FTPARSLEEFNDVYLVTHLM--GADLNNIVKCQKLTDDHVQFLIYQILRG----LKYIHS 166
Query: 449 SCEQPVIHKDVKSSNILLSDDFEPQLSDFGLASWLSTSSSHLTCTDVAGTFGYLAPEYFM 508
+ +IH+D+K SN+ +++D E ++ DFGLA T Y APE +
Sbjct: 167 A---DIIHRDLKPSNLAVNEDCELKILDFGLARHTDDE-----MXGYVATRWYRAPEIML 218
Query: 509 HG-KVSEKIDVYAFGIVLLELLSGK 532
+ ++ +D+++ G ++ ELL+G+
Sbjct: 219 NWMHYNQTVDIWSVGCIMAELLTGR 243
>pdb|1JNK|A Chain A, The C-Jun N-Terminal Kinase (Jnk3s) Complexed With
Mgamp-Pnp
Length = 423
Score = 50.1 bits (118), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 43/166 (25%), Positives = 78/166 (46%), Gaps = 15/166 (9%)
Query: 371 KEFASEIEIITALHHRNIISLFGFCFEDNNLLLVYD-FLSRGSLEENLHG---NKKDGNA 426
K E+ ++ ++H+NIISL L D +L ++ NL + D
Sbjct: 106 KRAYRELVLMKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIQMELDHER 165
Query: 427 FGWTERYKVAVGVAEALDYLHNSCEQPVIHKDVKSSNILLSDDFEPQLSDFGLASWLSTS 486
+ Y++ G+ +LH++ +IH+D+K SNI++ D ++ DFGLA T+
Sbjct: 166 MSYL-LYQMLCGIK----HLHSAG---IIHRDLKPSNIVVKSDCTLKILDFGLA---RTA 214
Query: 487 SSHLTCTDVAGTFGYLAPEYFMHGKVSEKIDVYAFGIVLLELLSGK 532
+ T T Y APE + E +D+++ G ++ E++ K
Sbjct: 215 GTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHK 260
>pdb|1YXS|A Chain A, Crystal Structure Of Kinase Pim1 With P123m Mutation
Length = 293
Score = 49.7 bits (117), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 45/148 (30%), Positives = 73/148 (49%), Gaps = 32/148 (21%)
Query: 404 VYDFLS-RGSLEENLHGNKKDGNAFGWTERYKVAVGVAEALDYLHNSCEQPVIHKDVKSS 462
++DF++ RG+L+E L +F W V EA+ + HN V+H+D+K
Sbjct: 101 LFDFITERGALQEEL------ARSFFWQ--------VLEAVRHCHNCG---VLHRDIKDE 143
Query: 463 NILLS-DDFEPQLSDFGLASWLSTSSSHLTCTDVAGTFGYLAPEYF----MHGKVSEKID 517
NIL+ + E +L DFG + L + TD GT Y PE+ HG+ +
Sbjct: 144 NILIDLNRGELKLIDFGSGALLKDT----VYTDFDGTRVYSPPEWIRYHRYHGRSAA--- 196
Query: 518 VYAFGIVLLELLSGKKPI--NSENPKGQ 543
V++ GI+L +++ G P + E +GQ
Sbjct: 197 VWSLGILLYDMVCGDIPFEHDEEIIRGQ 224
>pdb|3JXW|A Chain A, Discovery Of 3h-Benzo[4,5]thieno[3,2-D]pyrimidin-4-Ones As
Potent, Highly Selective And Orally Bioavailable Pim
Kinases Inhibitors
pdb|3JY0|A Chain A, Discovery Of 3h-Benzo[4,5]thieno[3,2-D]pyrimidin-4-Ones As
Potent, Highly Selective And Orally Bioavailable Pim
Kinases Inhibitors
pdb|3JYA|A Chain A, Discovery Of 3h-Benzo[4,5]thieno[3,2-D]pyrimidin-4-Ones As
Potent, Highly Selective And Orally Bioavailable Pim
Kinases Inhibitors
Length = 294
Score = 49.7 bits (117), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 45/148 (30%), Positives = 73/148 (49%), Gaps = 32/148 (21%)
Query: 404 VYDFLS-RGSLEENLHGNKKDGNAFGWTERYKVAVGVAEALDYLHNSCEQPVIHKDVKSS 462
++DF++ RG+L+E L +F W V EA+ + HN V+H+D+K
Sbjct: 102 LFDFITERGALQEEL------ARSFFWQ--------VLEAVRHCHNCG---VLHRDIKDE 144
Query: 463 NILLS-DDFEPQLSDFGLASWLSTSSSHLTCTDVAGTFGYLAPEYF----MHGKVSEKID 517
NIL+ + E +L DFG + L + TD GT Y PE+ HG+ +
Sbjct: 145 NILIDLNRGELKLIDFGSGALLKDT----VYTDFDGTRVYSPPEWIRYHRYHGRSAA--- 197
Query: 518 VYAFGIVLLELLSGKKPI--NSENPKGQ 543
V++ GI+L +++ G P + E +GQ
Sbjct: 198 VWSLGILLYDMVCGDIPFEHDEEIIRGQ 225
>pdb|1YWV|A Chain A, Crystal Structures Of Proto-Oncogene Kinase Pim1: A Target
Of Aberrant Somatic Hypermutations In Diffuse Large Cell
Lymphoma
pdb|1YXT|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With Amppnp
pdb|1YXU|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXU|B Chain B, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXU|C Chain C, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXU|D Chain D, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXV|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With
3,4-Dihydroxy-1- Methylquinolin-2(1h)-One
pdb|1YXX|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With
(3e)-3-[(4- Hydroxyphenyl)imino]-1h-Indol-2(3h)-One
pdb|2O3P|A Chain A, Crystal Structure Of Pim1 With Quercetin
pdb|2O63|A Chain A, Crystal Structure Of Pim1 With Myricetin
pdb|2O64|A Chain A, Crystal Structure Of Pim1 With Quercetagetin
pdb|2O65|A Chain A, Crystal Structure Of Pim1 With Pentahydroxyflavone
Length = 293
Score = 49.7 bits (117), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 45/148 (30%), Positives = 73/148 (49%), Gaps = 32/148 (21%)
Query: 404 VYDFLS-RGSLEENLHGNKKDGNAFGWTERYKVAVGVAEALDYLHNSCEQPVIHKDVKSS 462
++DF++ RG+L+E L +F W V EA+ + HN V+H+D+K
Sbjct: 101 LFDFITERGALQEEL------ARSFFWQ--------VLEAVRHCHNCG---VLHRDIKDE 143
Query: 463 NILLS-DDFEPQLSDFGLASWLSTSSSHLTCTDVAGTFGYLAPEYF----MHGKVSEKID 517
NIL+ + E +L DFG + L + TD GT Y PE+ HG+ +
Sbjct: 144 NILIDLNRGELKLIDFGSGALLKDT----VYTDFDGTRVYSPPEWIRYHRYHGRSAA--- 196
Query: 518 VYAFGIVLLELLSGKKPI--NSENPKGQ 543
V++ GI+L +++ G P + E +GQ
Sbjct: 197 VWSLGILLYDMVCGDIPFEHDEEIIRGQ 224
>pdb|3FI2|A Chain A, Crystal Structure Of Jnk3 With Amino-Pyrazole Inhibitor,
Sr- 3451
Length = 353
Score = 49.7 bits (117), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 43/166 (25%), Positives = 78/166 (46%), Gaps = 15/166 (9%)
Query: 371 KEFASEIEIITALHHRNIISLFGFCFEDNNLLLVYD-FLSRGSLEENLHG---NKKDGNA 426
K E+ ++ ++H+NIISL L D +L ++ NL + D
Sbjct: 68 KRAYRELVLMKXVNHKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIQMELDHER 127
Query: 427 FGWTERYKVAVGVAEALDYLHNSCEQPVIHKDVKSSNILLSDDFEPQLSDFGLASWLSTS 486
+ Y++ G+ +LH++ +IH+D+K SNI++ D ++ DFGLA T+
Sbjct: 128 MSYL-LYQMLCGIK----HLHSAG---IIHRDLKPSNIVVKSDXTLKILDFGLA---RTA 176
Query: 487 SSHLTCTDVAGTFGYLAPEYFMHGKVSEKIDVYAFGIVLLELLSGK 532
+ T T Y APE + E +D+++ G ++ E++ K
Sbjct: 177 GTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHK 222
>pdb|4DTK|A Chain A, Novel And Selective Pan-Pim Kinase Inhibitor
Length = 276
Score = 49.7 bits (117), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 43/145 (29%), Positives = 72/145 (49%), Gaps = 26/145 (17%)
Query: 404 VYDFLS-RGSLEENLHGNKKDGNAFGWTERYKVAVGVAEALDYLHNSCEQPVIHKDVKSS 462
++DF++ RG+L+E L +F W V EA+ + HN V+H+D+K
Sbjct: 100 LFDFITERGALQEEL------ARSFFWQ--------VLEAVRHCHNCG---VLHRDIKDE 142
Query: 463 NILLS-DDFEPQLSDFGLASWLSTSSSHLTCTDVAGTFGYLAPEYFMHGKVSEK-IDVYA 520
NIL+ + E +L DFG + L + TD GT Y PE+ + + + V++
Sbjct: 143 NILIDLNRGELKLIDFGSGALLKDT----VYTDFDGTRVYSPPEWIRYHRYHGRSAAVWS 198
Query: 521 FGIVLLELLSGKKPI--NSENPKGQ 543
GI+L +++ G P + E +GQ
Sbjct: 199 LGILLYDMVCGDIPFEHDEEIIRGQ 223
>pdb|1YHS|A Chain A, Crystal Structure Of Pim-1 Bound To Staurosporine
pdb|1YI3|A Chain A, Crystal Structure Of Pim-1 Bound To Ly294002
pdb|1YI4|A Chain A, Structure Of Pim-1 Bound To Adenosine
Length = 273
Score = 49.7 bits (117), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 43/145 (29%), Positives = 72/145 (49%), Gaps = 26/145 (17%)
Query: 404 VYDFLS-RGSLEENLHGNKKDGNAFGWTERYKVAVGVAEALDYLHNSCEQPVIHKDVKSS 462
++DF++ RG+L+E L +F W V EA+ + HN V+H+D+K
Sbjct: 97 LFDFITERGALQEEL------ARSFFWQ--------VLEAVRHCHNXG---VLHRDIKDE 139
Query: 463 NILLS-DDFEPQLSDFGLASWLSTSSSHLTCTDVAGTFGYLAPEYFMHGKVSEK-IDVYA 520
NIL+ + E +L DFG + L + TD GT Y PE+ + + + V++
Sbjct: 140 NILIDLNRGELKLIDFGSGALLKDT----VYTDFDGTRVYSPPEWIRYHRYHGRSAAVWS 195
Query: 521 FGIVLLELLSGKKPI--NSENPKGQ 543
GI+L +++ G P + E +GQ
Sbjct: 196 LGILLYDMVCGDIPFEHDEEIIRGQ 220
>pdb|3R00|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3R01|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3R02|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3R04|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3VBQ|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBT|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBV|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBW|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBX|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBY|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VC4|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
Length = 299
Score = 49.7 bits (117), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 43/145 (29%), Positives = 72/145 (49%), Gaps = 26/145 (17%)
Query: 404 VYDFLS-RGSLEENLHGNKKDGNAFGWTERYKVAVGVAEALDYLHNSCEQPVIHKDVKSS 462
++DF++ RG+L+E L +F W V EA+ + HN V+H+D+K
Sbjct: 102 LFDFITERGALQEEL------ARSFFWQ--------VLEAVRHCHNCG---VLHRDIKDE 144
Query: 463 NILLS-DDFEPQLSDFGLASWLSTSSSHLTCTDVAGTFGYLAPEYFMHGKVSEK-IDVYA 520
NIL+ + E +L DFG + L + TD GT Y PE+ + + + V++
Sbjct: 145 NILIDLNRGELKLIDFGSGALLKDT----VYTDFDGTRVYSPPEWIRYHRYHGRSAAVWS 200
Query: 521 FGIVLLELLSGKKPI--NSENPKGQ 543
GI+L +++ G P + E +GQ
Sbjct: 201 LGILLYDMVCGDIPFEHDEEIIRGQ 225
>pdb|3C4E|A Chain A, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
pdb|3C4E|B Chain B, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
pdb|3C4E|C Chain C, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
pdb|3C4E|D Chain D, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
Length = 273
Score = 49.7 bits (117), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 43/145 (29%), Positives = 72/145 (49%), Gaps = 26/145 (17%)
Query: 404 VYDFLS-RGSLEENLHGNKKDGNAFGWTERYKVAVGVAEALDYLHNSCEQPVIHKDVKSS 462
++DF++ RG+L+E L +F W V EA+ + HN V+H+D+K
Sbjct: 97 LFDFITERGALQEEL------ARSFFWQ--------VLEAVRHCHNCG---VLHRDIKDE 139
Query: 463 NILLS-DDFEPQLSDFGLASWLSTSSSHLTCTDVAGTFGYLAPEYFMHGKVSEK-IDVYA 520
NIL+ + E +L DFG + L + TD GT Y PE+ + + + V++
Sbjct: 140 NILIDLNRGELKLIDFGSGALLKDT----VYTDFDGTRVYSPPEWIRYHRYHGRSAAVWS 195
Query: 521 FGIVLLELLSGKKPI--NSENPKGQ 543
GI+L +++ G P + E +GQ
Sbjct: 196 LGILLYDMVCGDIPFEHDEEIIRGQ 220
>pdb|1XWS|A Chain A, Crystal Structure Of The Human Pim1 Kinase Domain
Length = 313
Score = 49.7 bits (117), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 43/145 (29%), Positives = 72/145 (49%), Gaps = 26/145 (17%)
Query: 404 VYDFLS-RGSLEENLHGNKKDGNAFGWTERYKVAVGVAEALDYLHNSCEQPVIHKDVKSS 462
++DF++ RG+L+E L +F W V EA+ + HN V+H+D+K
Sbjct: 129 LFDFITERGALQEEL------ARSFFWQ--------VLEAVRHCHNCG---VLHRDIKDE 171
Query: 463 NILLS-DDFEPQLSDFGLASWLSTSSSHLTCTDVAGTFGYLAPEYFMHGKVSEK-IDVYA 520
NIL+ + E +L DFG + L + TD GT Y PE+ + + + V++
Sbjct: 172 NILIDLNRGELKLIDFGSGALLKDT----VYTDFDGTRVYSPPEWIRYHRYHGRSAAVWS 227
Query: 521 FGIVLLELLSGKKPI--NSENPKGQ 543
GI+L +++ G P + E +GQ
Sbjct: 228 LGILLYDMVCGDIPFEHDEEIIRGQ 252
>pdb|1XQZ|A Chain A, Crystal Structure Of Hpim-1 Kinase At 2.1 A Resolution
pdb|1XR1|A Chain A, Crystal Structure Of Hpim-1 Kinase In Complex With Amp-Pnp
At 2.1 A Resolution
Length = 300
Score = 49.7 bits (117), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 43/145 (29%), Positives = 72/145 (49%), Gaps = 26/145 (17%)
Query: 404 VYDFLS-RGSLEENLHGNKKDGNAFGWTERYKVAVGVAEALDYLHNSCEQPVIHKDVKSS 462
++DF++ RG+L+E L +F W V EA+ + HN V+H+D+K
Sbjct: 116 LFDFITERGALQEEL------ARSFFWQ--------VLEAVRHCHNCG---VLHRDIKDE 158
Query: 463 NILLS-DDFEPQLSDFGLASWLSTSSSHLTCTDVAGTFGYLAPEYFMHGKVSEK-IDVYA 520
NIL+ + E +L DFG + L + TD GT Y PE+ + + + V++
Sbjct: 159 NILIDLNRGELKLIDFGSGALLKDT----VYTDFDGTRVYSPPEWIRYHRYHGRSAAVWS 214
Query: 521 FGIVLLELLSGKKPI--NSENPKGQ 543
GI+L +++ G P + E +GQ
Sbjct: 215 LGILLYDMVCGDIPFEHDEEIIRGQ 239
>pdb|2OBJ|A Chain A, Crystal Structure Of Human Pim-1 Kinase In Complex With
Inhibitor
pdb|3BGP|A Chain A, Human Pim-1 Complexed With A Benzoisoxazole Inhibitor Vx1
pdb|3BGQ|A Chain A, Human Pim-1 Kinase In Complex With An Triazolo Pyridazine
Inhibitor Vx2
pdb|3BGZ|A Chain A, Human Pim-1 Kinase In Complex With Diphenyl Indole
Inhibitor Vx3
Length = 333
Score = 49.7 bits (117), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 43/145 (29%), Positives = 72/145 (49%), Gaps = 26/145 (17%)
Query: 404 VYDFLS-RGSLEENLHGNKKDGNAFGWTERYKVAVGVAEALDYLHNSCEQPVIHKDVKSS 462
++DF++ RG+L+E L +F W V EA+ + HN V+H+D+K
Sbjct: 149 LFDFITERGALQEEL------ARSFFWQ--------VLEAVRHCHNCG---VLHRDIKDE 191
Query: 463 NILLS-DDFEPQLSDFGLASWLSTSSSHLTCTDVAGTFGYLAPEYFMHGKVSEK-IDVYA 520
NIL+ + E +L DFG + L + TD GT Y PE+ + + + V++
Sbjct: 192 NILIDLNRGELKLIDFGSGALLKDT----VYTDFDGTRVYSPPEWIRYHRYHGRSAAVWS 247
Query: 521 FGIVLLELLSGKKPI--NSENPKGQ 543
GI+L +++ G P + E +GQ
Sbjct: 248 LGILLYDMVCGDIPFEHDEEIIRGQ 272
>pdb|3GI3|A Chain A, Crystal Structure Of A N-Phenyl-N'-Naphthylurea Analog In
Complex With P38 Map Kinase
Length = 360
Score = 49.7 bits (117), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 52/205 (25%), Positives = 96/205 (46%), Gaps = 25/205 (12%)
Query: 339 VGKGGHSHVYRGC-LPDGKELAVKIL-KPSEDVL--KEFASEIEIITALHHRNIISLFGF 394
VG G + V G +AVK L +P + ++ K E+ ++ + H N+I L
Sbjct: 30 VGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 89
Query: 395 CF------EDNNLLLVYDFLSRGSLEENLHGNKKDGNAFGWTERYKVAVGVAEALDYLHN 448
E N++ LV + G+ N+ +K + Y++ G L Y+H+
Sbjct: 90 FTPARSLEEFNDVYLVTHLM--GADLNNIVKCQKLTDDHVQFLIYQILRG----LKYIHS 143
Query: 449 SCEQPVIHKDVKSSNILLSDDFEPQLSDFGLASWLSTSSSHLTCTDVAGTFGYLAPEYFM 508
+ +IH+D+K SN+ +++D E ++ DF LA T T Y APE +
Sbjct: 144 A---DIIHRDLKPSNLAVNEDCELKILDFYLARHTDDE-----MTGYVATRWYRAPEIML 195
Query: 509 HG-KVSEKIDVYAFGIVLLELLSGK 532
+ ++ +D+++ G ++ ELL+G+
Sbjct: 196 NWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|3F2A|A Chain A, Crystal Structure Of Human Pim-1 In Complex With Dappa
Length = 300
Score = 49.7 bits (117), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 43/145 (29%), Positives = 72/145 (49%), Gaps = 26/145 (17%)
Query: 404 VYDFLS-RGSLEENLHGNKKDGNAFGWTERYKVAVGVAEALDYLHNSCEQPVIHKDVKSS 462
++DF++ RG+L+E L +F W V EA+ + HN V+H+D+K
Sbjct: 116 LFDFITERGALQEEL------ARSFFWQ--------VLEAVRHCHNCG---VLHRDIKDE 158
Query: 463 NILLS-DDFEPQLSDFGLASWLSTSSSHLTCTDVAGTFGYLAPEYFMHGKVSEK-IDVYA 520
NIL+ + E +L DFG + L + TD GT Y PE+ + + + V++
Sbjct: 159 NILIDLNRGELKLIDFGSGALLKDT----VYTDFDGTRVYSPPEWIRYHRYHGRSAAVWS 214
Query: 521 FGIVLLELLSGKKPI--NSENPKGQ 543
GI+L +++ G P + E +GQ
Sbjct: 215 LGILLYDMVCGDIPFEHDEEIIRGQ 239
>pdb|3DCV|A Chain A, Crystal Structure Of Human Pim1 Kinase Complexed With
4-(4-
Hydroxy-3-Methyl-Phenyl)-6-Phenylpyrimidin-2(1h)-One
pdb|3T9I|A Chain A, Pim1 Complexed With A Novel 3,6-Disubstituted Indole At
2.6 Ang Resolution
Length = 328
Score = 49.7 bits (117), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 43/145 (29%), Positives = 72/145 (49%), Gaps = 26/145 (17%)
Query: 404 VYDFLS-RGSLEENLHGNKKDGNAFGWTERYKVAVGVAEALDYLHNSCEQPVIHKDVKSS 462
++DF++ RG+L+E L +F W V EA+ + HN V+H+D+K
Sbjct: 144 LFDFITERGALQEEL------ARSFFWQ--------VLEAVRHCHNCG---VLHRDIKDE 186
Query: 463 NILLS-DDFEPQLSDFGLASWLSTSSSHLTCTDVAGTFGYLAPEYFMHGKVSEK-IDVYA 520
NIL+ + E +L DFG + L + TD GT Y PE+ + + + V++
Sbjct: 187 NILIDLNRGELKLIDFGSGALLKDT----VYTDFDGTRVYSPPEWIRYHRYHGRSAAVWS 242
Query: 521 FGIVLLELLSGKKPI--NSENPKGQ 543
GI+L +++ G P + E +GQ
Sbjct: 243 LGILLYDMVCGDIPFEHDEEIIRGQ 267
>pdb|3V3V|A Chain A, Structural And Functional Analysis Of Quercetagetin, A
Natural Jnk1 Inhibitor
Length = 379
Score = 49.3 bits (116), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 27/90 (30%), Positives = 49/90 (54%), Gaps = 6/90 (6%)
Query: 442 ALDYLHNSCEQPVIHKDVKSSNILLSDDFEPQLSDFGLASWLSTSSSHLTCTDVAGTFGY 501
+ +LH++ +IH+D+K SNI++ D ++ DFGLA T+ + T T Y
Sbjct: 138 GIKHLHSAG---IIHRDLKPSNIVVKSDCTLKILDFGLA---RTAGTSFMMTPEVVTRYY 191
Query: 502 LAPEYFMHGKVSEKIDVYAFGIVLLELLSG 531
APE + E +D+++ G ++ E++ G
Sbjct: 192 RAPEVILGMGYKENVDIWSVGCIMGEMIKG 221
>pdb|2XIX|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-1 From
Crystallographic Fragment Screen
Length = 301
Score = 49.3 bits (116), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 43/145 (29%), Positives = 72/145 (49%), Gaps = 26/145 (17%)
Query: 404 VYDFLS-RGSLEENLHGNKKDGNAFGWTERYKVAVGVAEALDYLHNSCEQPVIHKDVKSS 462
++DF++ RG+L+E L +F W V EA+ + HN V+H+D+K
Sbjct: 117 LFDFITERGALQEEL------ARSFFWQ--------VLEAVRHCHNCG---VLHRDIKDE 159
Query: 463 NILLS-DDFEPQLSDFGLASWLSTSSSHLTCTDVAGTFGYLAPEYFMHGKVSEK-IDVYA 520
NIL+ + E +L DFG + L + TD GT Y PE+ + + + V++
Sbjct: 160 NILIDLNRGELKLIDFGSGALLKDT----VYTDFDGTRVYSPPEWIRYHRYHGRSAAVWS 215
Query: 521 FGIVLLELLSGKKPI--NSENPKGQ 543
GI+L +++ G P + E +GQ
Sbjct: 216 LGILLYDMVCGDIPFEHDEEIIRGQ 240
>pdb|3A99|A Chain A, Structure Of Pim-1 Kinase Crystallized In The Presence Of
P27kip1 Carboxy-Terminal Peptide
Length = 320
Score = 49.3 bits (116), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 43/145 (29%), Positives = 72/145 (49%), Gaps = 26/145 (17%)
Query: 404 VYDFLS-RGSLEENLHGNKKDGNAFGWTERYKVAVGVAEALDYLHNSCEQPVIHKDVKSS 462
++DF++ RG+L+E L +F W V EA+ + HN V+H+D+K
Sbjct: 136 LFDFITERGALQEEL------ARSFFWQ--------VLEAVRHCHNCG---VLHRDIKDE 178
Query: 463 NILLS-DDFEPQLSDFGLASWLSTSSSHLTCTDVAGTFGYLAPEYFMHGKVSEK-IDVYA 520
NIL+ + E +L DFG + L + TD GT Y PE+ + + + V++
Sbjct: 179 NILIDLNRGELKLIDFGSGALLKDT----VYTDFDGTRVYSPPEWIRYHRYHGRSAAVWS 234
Query: 521 FGIVLLELLSGKKPI--NSENPKGQ 543
GI+L +++ G P + E +GQ
Sbjct: 235 LGILLYDMVCGDIPFEHDEEIIRGQ 259
>pdb|3UIX|A Chain A, Crystal Structure Of Pim1 Kinase In Complex With Small
Molecule Inhibitor
pdb|3UMX|A Chain A, Crystal Structure Of Pim1 Kinase In Complex With Inhibitor
(Z)-2-[(1h-
Indol-3-Yl)methylene]-7-(Azepan-1-Ylmethyl)-6-
Hydroxybenzofuran- 3(2h)-One
pdb|4ENX|A Chain A, Crystal Structure Of Pim-1 Kinase In Complex With
Inhibitor (2e,5z)-2-
(2-Chlorophenylimino)-5-(4-Hydroxy-3-
Nitrobenzylidene)thiazolidin-4- One
pdb|4ENY|A Chain A, Crystal Structure Of Pim-1 Kinase In Complex With
(2e,5z)-2-(2-
Chlorophenylimino)-5-(4-Hydroxy-3-
Methoxybenzylidene)thiazolidin-4- One
pdb|3UMW|A Chain A, Crystal Structure Of Pim1 Kinase In Complex With Inhibitor
(Z)-2-[(1h-
Indazol-3-Yl)methylene]-6-Methoxy-7-(Piperazin-1-
Ylmethyl)benzofuran- 3(2h)-One
Length = 298
Score = 49.3 bits (116), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 43/145 (29%), Positives = 72/145 (49%), Gaps = 26/145 (17%)
Query: 404 VYDFLS-RGSLEENLHGNKKDGNAFGWTERYKVAVGVAEALDYLHNSCEQPVIHKDVKSS 462
++DF++ RG+L+E L +F W V EA+ + HN V+H+D+K
Sbjct: 102 LFDFITERGALQEEL------ARSFFWQ--------VLEAVRHCHNCG---VLHRDIKDE 144
Query: 463 NILLS-DDFEPQLSDFGLASWLSTSSSHLTCTDVAGTFGYLAPEYFMHGKVSEK-IDVYA 520
NIL+ + E +L DFG + L + TD GT Y PE+ + + + V++
Sbjct: 145 NILIDLNRGELKLIDFGSGALLKDT----VYTDFDGTRVYSPPEWIRYHRYHGRSAAVWS 200
Query: 521 FGIVLLELLSGKKPI--NSENPKGQ 543
GI+L +++ G P + E +GQ
Sbjct: 201 LGILLYDMVCGDIPFEHDEEIIRGQ 225
>pdb|2XJ0|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-4 From
Crystallographic Fragment Screen
Length = 301
Score = 49.3 bits (116), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 43/145 (29%), Positives = 72/145 (49%), Gaps = 26/145 (17%)
Query: 404 VYDFLS-RGSLEENLHGNKKDGNAFGWTERYKVAVGVAEALDYLHNSCEQPVIHKDVKSS 462
++DF++ RG+L+E L +F W V EA+ + HN V+H+D+K
Sbjct: 117 LFDFITERGALQEEL------ARSFFWQ--------VLEAVRHCHNCG---VLHRDIKDE 159
Query: 463 NILLS-DDFEPQLSDFGLASWLSTSSSHLTCTDVAGTFGYLAPEYFMHGKVSEK-IDVYA 520
NIL+ + E +L DFG + L + TD GT Y PE+ + + + V++
Sbjct: 160 NILIDLNRGELKLIDFGSGALLKDT----VYTDFDGTRVYSPPEWIRYHRYHGRSAAVWS 215
Query: 521 FGIVLLELLSGKKPI--NSENPKGQ 543
GI+L +++ G P + E +GQ
Sbjct: 216 LGILLYDMVCGDIPFEHDEEIIRGQ 240
>pdb|3O8P|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
pdb|3MPA|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 49.3 bits (116), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 52/205 (25%), Positives = 96/205 (46%), Gaps = 25/205 (12%)
Query: 339 VGKGGHSHVYRGC-LPDGKELAVKIL-KPSEDVL--KEFASEIEIITALHHRNIISLFGF 394
VG G + V G +AVK L +P + ++ K E+ ++ + H N+I L
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 89
Query: 395 CF------EDNNLLLVYDFLSRGSLEENLHGNKKDGNAFGWTERYKVAVGVAEALDYLHN 448
E N++ LV + G+ N+ +K + Y++ G L Y+H+
Sbjct: 90 FTPARSLEEFNDVYLVTHLM--GADLNNIVKCQKLTDDHVQFLIYQILRG----LKYIHS 143
Query: 449 SCEQPVIHKDVKSSNILLSDDFEPQLSDFGLASWLSTSSSHLTCTDVAGTFGYLAPEYFM 508
+ +IH+D+K SN+ +++D E ++ FGLA T T Y APE +
Sbjct: 144 A---DIIHRDLKPSNLAVNEDCELKILGFGLARHTDDE-----MTGYVATRWYRAPEIML 195
Query: 509 HG-KVSEKIDVYAFGIVLLELLSGK 532
+ ++ +D+++ G ++ ELL+G+
Sbjct: 196 NWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|4ALV|A Chain A, Benzofuropyrimidinone Inhibitors Of Pim-1
pdb|4ALW|A Chain A, Benzofuropyrimidinone Inhibitors Of Pim-1
Length = 328
Score = 49.3 bits (116), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 43/145 (29%), Positives = 72/145 (49%), Gaps = 26/145 (17%)
Query: 404 VYDFLS-RGSLEENLHGNKKDGNAFGWTERYKVAVGVAEALDYLHNSCEQPVIHKDVKSS 462
++DF++ RG+L+E L +F W V EA+ + HN V+H+D+K
Sbjct: 144 LFDFITERGALQEEL------ARSFFWQ--------VLEAVRHCHNCG---VLHRDIKDE 186
Query: 463 NILLS-DDFEPQLSDFGLASWLSTSSSHLTCTDVAGTFGYLAPEYFMHGKVSEK-IDVYA 520
NIL+ + E +L DFG + L + TD GT Y PE+ + + + V++
Sbjct: 187 NILIDLNRGELKLIDFGSGALLKDT----VYTDFDGTRVYSPPEWIRYHRYHGRSAAVWS 242
Query: 521 FGIVLLELLSGKKPI--NSENPKGQ 543
GI+L +++ G P + E +GQ
Sbjct: 243 LGILLYDMVCGDIPFEHDEEIIRGQ 267
>pdb|2XIY|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-2 From
Crystallographic Fragment Screen
pdb|2XIZ|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-3 From
Crystallographic Fragment Screen
pdb|2XJ1|A Chain A, Protein Kinase Pim-1 In Complex With Small Molecule
Inibitor
pdb|2XJ2|A Chain A, Protein Kinase Pim-1 In Complex With Small Molecule
Inhibitor
Length = 301
Score = 49.3 bits (116), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 43/145 (29%), Positives = 72/145 (49%), Gaps = 26/145 (17%)
Query: 404 VYDFLS-RGSLEENLHGNKKDGNAFGWTERYKVAVGVAEALDYLHNSCEQPVIHKDVKSS 462
++DF++ RG+L+E L +F W V EA+ + HN V+H+D+K
Sbjct: 117 LFDFITERGALQEEL------ARSFFWQ--------VLEAVRHCHNCG---VLHRDIKDE 159
Query: 463 NILLS-DDFEPQLSDFGLASWLSTSSSHLTCTDVAGTFGYLAPEYFMHGKVSEK-IDVYA 520
NIL+ + E +L DFG + L + TD GT Y PE+ + + + V++
Sbjct: 160 NILIDLNRGELKLIDFGSGALLKDT----VYTDFDGTRVYSPPEWIRYHRYHGRSAAVWS 215
Query: 521 FGIVLLELLSGKKPI--NSENPKGQ 543
GI+L +++ G P + E +GQ
Sbjct: 216 LGILLYDMVCGDIPFEHDEEIIRGQ 240
>pdb|3CXW|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Beta Carboline Ligand I
pdb|3CY2|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Beta Carboline Ligand Ii
Length = 314
Score = 49.3 bits (116), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 40/138 (28%), Positives = 68/138 (49%), Gaps = 24/138 (17%)
Query: 404 VYDFLS-RGSLEENLHGNKKDGNAFGWTERYKVAVGVAEALDYLHNSCEQPVIHKDVKSS 462
++DF++ RG+L+E L +F W V EA+ + HN V+H+D+K
Sbjct: 130 LFDFITERGALQEEL------ARSFFWQ--------VLEAVRHCHNCG---VLHRDIKDE 172
Query: 463 NILLS-DDFEPQLSDFGLASWLSTSSSHLTCTDVAGTFGYLAPEYFMHGKVSEK-IDVYA 520
NIL+ + E +L DFG + L + TD GT Y PE+ + + + V++
Sbjct: 173 NILIDLNRGELKLIDFGSGALLKDT----VYTDFDGTRVYSPPEWIRYHRYHGRSAAVWS 228
Query: 521 FGIVLLELLSGKKPINSE 538
GI+L +++ G P +
Sbjct: 229 LGILLYDMVCGDIPFEHD 246
>pdb|4A7C|A Chain A, Crystal Structure Of Pim1 Kinase With Etp46546
Length = 308
Score = 49.3 bits (116), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 43/145 (29%), Positives = 72/145 (49%), Gaps = 26/145 (17%)
Query: 404 VYDFLS-RGSLEENLHGNKKDGNAFGWTERYKVAVGVAEALDYLHNSCEQPVIHKDVKSS 462
++DF++ RG+L+E L +F W V EA+ + HN V+H+D+K
Sbjct: 124 LFDFITERGALQEEL------ARSFFWQ--------VLEAVRHCHNCG---VLHRDIKDE 166
Query: 463 NILLS-DDFEPQLSDFGLASWLSTSSSHLTCTDVAGTFGYLAPEYFMHGKVSEK-IDVYA 520
NIL+ + E +L DFG + L + TD GT Y PE+ + + + V++
Sbjct: 167 NILIDLNRGELKLIDFGSGALLKDT----VYTDFDGTRVYSPPEWIRYHRYHGRSAAVWS 222
Query: 521 FGIVLLELLSGKKPI--NSENPKGQ 543
GI+L +++ G P + E +GQ
Sbjct: 223 LGILLYDMVCGDIPFEHDEEIIRGQ 247
>pdb|3JPV|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Pyrrolo[2,3- A]carbazole Ligand
pdb|3QF9|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Furan- Thiazolidinedione Ligand
pdb|4GW8|A Chain A, Human Proto-Oncogene Serine Threonine Kinase (Pim1) In
Complex With A Consensus Peptide And Leucettine L41
Length = 313
Score = 49.3 bits (116), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 40/138 (28%), Positives = 68/138 (49%), Gaps = 24/138 (17%)
Query: 404 VYDFLS-RGSLEENLHGNKKDGNAFGWTERYKVAVGVAEALDYLHNSCEQPVIHKDVKSS 462
++DF++ RG+L+E L +F W V EA+ + HN V+H+D+K
Sbjct: 130 LFDFITERGALQEEL------ARSFFWQ--------VLEAVRHCHNCG---VLHRDIKDE 172
Query: 463 NILLS-DDFEPQLSDFGLASWLSTSSSHLTCTDVAGTFGYLAPEYFMHGKVSEK-IDVYA 520
NIL+ + E +L DFG + L + TD GT Y PE+ + + + V++
Sbjct: 173 NILIDLNRGELKLIDFGSGALLKDT----VYTDFDGTRVYSPPEWIRYHRYHGRSAAVWS 228
Query: 521 FGIVLLELLSGKKPINSE 538
GI+L +++ G P +
Sbjct: 229 LGILLYDMVCGDIPFEHD 246
>pdb|2BIK|B Chain B, Human Pim1 Phosphorylated On Ser261
pdb|2BZI|B Chain B, Crystal Structure Of The Human Pim1 In Complex With A
Ruthenium Organometallic Ligand Ru2
Length = 313
Score = 49.3 bits (116), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 40/138 (28%), Positives = 68/138 (49%), Gaps = 24/138 (17%)
Query: 404 VYDFLS-RGSLEENLHGNKKDGNAFGWTERYKVAVGVAEALDYLHNSCEQPVIHKDVKSS 462
++DF++ RG+L+E L +F W V EA+ + HN V+H+D+K
Sbjct: 129 LFDFITERGALQEEL------ARSFFWQ--------VLEAVRHCHNCG---VLHRDIKDE 171
Query: 463 NILLS-DDFEPQLSDFGLASWLSTSSSHLTCTDVAGTFGYLAPEYFMHGKVSEK-IDVYA 520
NIL+ + E +L DFG + L + TD GT Y PE+ + + + V++
Sbjct: 172 NILIDLNRGELKLIDFGSGALLKDT----VYTDFDGTRVYSPPEWIRYHRYHGRSAAVWS 227
Query: 521 FGIVLLELLSGKKPINSE 538
GI+L +++ G P +
Sbjct: 228 LGILLYDMVCGDIPFEHD 245
>pdb|3P23|A Chain A, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
pdb|3P23|B Chain B, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
pdb|3P23|C Chain C, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
pdb|3P23|D Chain D, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
Length = 432
Score = 49.3 bits (116), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 75/283 (26%), Positives = 127/283 (44%), Gaps = 36/283 (12%)
Query: 332 NFLPEYLVGKGGH-SHVYRGCLPDGKELAVKILKPSEDVLKEFASEIEIIT-ALHHRNII 389
+F P+ ++G G + VYRG D +++AVK + P + E++++ + H N+I
Sbjct: 25 SFCPKDVLGHGAEGTIVYRGMF-DNRDVAVKRILP--ECFSFADREVQLLRESDEHPNVI 81
Query: 390 SLFGFCFE-DNNLLLVYDFLSRGSLEENLHGNKKDGNAFGWTERYKVAVGVAEALDYLHN 448
F C E D + L +L+E + +KD G E + L +LH+
Sbjct: 82 RYF--CTEKDRQFQYIAIELCAATLQEYV--EQKDFAHLGL-EPITLLQQTTSGLAHLHS 136
Query: 449 SCEQPVIHKDVKSSNILLS-----DDFEPQLSDFGLASWLSTSSSHLT-CTDVAGTFGYL 502
++H+D+K NIL+S + +SDFGL L+ + + V GT G++
Sbjct: 137 ---LNIVHRDLKPHNILISMPNAHGKIKAMISDFGLCKKLAVGRHSFSRRSGVPGTEGWI 193
Query: 503 APEYFMHG---KVSEKIDVYAFGIVLLELLSGKKPINSENPKGQESLVMWAKPILKDGKV 559
APE + +D+++ G V ++S +P G+ SL A +L G
Sbjct: 194 APEMLSEDCKENPTYTVDIFSAGCVFYYVIS-----EGSHPFGK-SLQRQANILL--GAC 245
Query: 560 SQLLDPSLDTDYDNDQIERMVLAATLSISRAPTVRPQINLVLK 602
S LD L + D I R ++ +++ P RP VLK
Sbjct: 246 S--LD-CLHPEKHEDVIARELIEKMIAMD--PQKRPSAKHVLK 283
>pdb|3MA3|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Naphtho-Difuran Ligand
Length = 313
Score = 49.3 bits (116), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 40/138 (28%), Positives = 68/138 (49%), Gaps = 24/138 (17%)
Query: 404 VYDFLS-RGSLEENLHGNKKDGNAFGWTERYKVAVGVAEALDYLHNSCEQPVIHKDVKSS 462
++DF++ RG+L+E L +F W V EA+ + HN V+H+D+K
Sbjct: 130 LFDFITERGALQEEL------ARSFFWQ--------VLEAVRHCHNCG---VLHRDIKDE 172
Query: 463 NILLS-DDFEPQLSDFGLASWLSTSSSHLTCTDVAGTFGYLAPEYFMHGKVSEK-IDVYA 520
NIL+ + E +L DFG + L + TD GT Y PE+ + + + V++
Sbjct: 173 NILIDLNRGELKLIDFGSGALLKDT----VYTDFDGTRVYSPPEWIRYHRYHGRSAAVWS 228
Query: 521 FGIVLLELLSGKKPINSE 538
GI+L +++ G P +
Sbjct: 229 LGILLYDMVCGDIPFEHD 246
>pdb|2J2I|B Chain B, Crystal Structure Of The Humab Pim1 In Complex With
Ly333531
Length = 312
Score = 49.3 bits (116), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 40/138 (28%), Positives = 68/138 (49%), Gaps = 24/138 (17%)
Query: 404 VYDFLS-RGSLEENLHGNKKDGNAFGWTERYKVAVGVAEALDYLHNSCEQPVIHKDVKSS 462
++DF++ RG+L+E L +F W V EA+ + HN V+H+D+K
Sbjct: 129 LFDFITERGALQEEL------ARSFFWQ--------VLEAVRHCHNCG---VLHRDIKDE 171
Query: 463 NILLS-DDFEPQLSDFGLASWLSTSSSHLTCTDVAGTFGYLAPEYFMHGKVSEK-IDVYA 520
NIL+ + E +L DFG + L + TD GT Y PE+ + + + V++
Sbjct: 172 NILIDLNRGELKLIDFGSGALLKDT----VYTDFDGTRVYSPPEWIRYHRYHGRSAAVWS 227
Query: 521 FGIVLLELLSGKKPINSE 538
GI+L +++ G P +
Sbjct: 228 LGILLYDMVCGDIPFEHD 245
>pdb|2BIL|B Chain B, The Human Protein Kinase Pim1 In Complex With Its
Consensus Peptide Pimtide
pdb|2BZJ|A Chain A, Crystal Structure Of The Human Pim1 In Complex With A
Ruthenium Organometallic Ligand Ru3
pdb|2BZK|B Chain B, Crystal Structure Of The Human Pim1 In Complex With Amppnp
And Pimtide
pdb|2C3I|B Chain B, Crystal Structure Of Human Pim1 In Complex With
Imidazopyridazin I
pdb|2BZH|B Chain B, Crystal Structure Of The Human Pim1 In Complex With A
Ruthenium Organometallic Ligand Ru1
pdb|2OI4|X Chain X, Crystal Structure Of Human Pim1 In Complex With
Fluorinated Ruthenium Pyridocarbazole
pdb|3BWF|A Chain A, Crystal Structure Of The Human Pim1 In Complex With An
Osmium Compound
Length = 313
Score = 49.3 bits (116), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 40/138 (28%), Positives = 68/138 (49%), Gaps = 24/138 (17%)
Query: 404 VYDFLS-RGSLEENLHGNKKDGNAFGWTERYKVAVGVAEALDYLHNSCEQPVIHKDVKSS 462
++DF++ RG+L+E L +F W V EA+ + HN V+H+D+K
Sbjct: 129 LFDFITERGALQEEL------ARSFFWQ--------VLEAVRHCHNCG---VLHRDIKDE 171
Query: 463 NILLS-DDFEPQLSDFGLASWLSTSSSHLTCTDVAGTFGYLAPEYFMHGKVSEK-IDVYA 520
NIL+ + E +L DFG + L + TD GT Y PE+ + + + V++
Sbjct: 172 NILIDLNRGELKLIDFGSGALLKDT----VYTDFDGTRVYSPPEWIRYHRYHGRSAAVWS 227
Query: 521 FGIVLLELLSGKKPINSE 538
GI+L +++ G P +
Sbjct: 228 LGILLYDMVCGDIPFEHD 245
>pdb|3CY3|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And
The Jnk Inhibitor V
Length = 314
Score = 49.3 bits (116), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 40/138 (28%), Positives = 68/138 (49%), Gaps = 24/138 (17%)
Query: 404 VYDFLS-RGSLEENLHGNKKDGNAFGWTERYKVAVGVAEALDYLHNSCEQPVIHKDVKSS 462
++DF++ RG+L+E L +F W V EA+ + HN V+H+D+K
Sbjct: 130 LFDFITERGALQEEL------ARSFFWQ--------VLEAVRHCHNCG---VLHRDIKDE 172
Query: 463 NILLS-DDFEPQLSDFGLASWLSTSSSHLTCTDVAGTFGYLAPEYFMHGKVSEK-IDVYA 520
NIL+ + E +L DFG + L + TD GT Y PE+ + + + V++
Sbjct: 173 NILIDLNRGELKLIDFGSGALLKDT----VYTDFDGTRVYSPPEWIRYHRYHGRSAAVWS 228
Query: 521 FGIVLLELLSGKKPINSE 538
GI+L +++ G P +
Sbjct: 229 LGILLYDMVCGDIPFEHD 246
>pdb|2XS0|A Chain A, Linear Binding Motifs For Jnk And For Calcineurin
Antagonistically Control The Nuclear Shuttling Of Nfat4
Length = 386
Score = 49.3 bits (116), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 26/90 (28%), Positives = 48/90 (53%), Gaps = 6/90 (6%)
Query: 442 ALDYLHNSCEQPVIHKDVKSSNILLSDDFEPQLSDFGLASWLSTSSSHLTCTDVAGTFGY 501
+ +LH++ +IH+D+K SNI++ D ++ DFGLA T+ + T Y
Sbjct: 140 GIKHLHSAG---IIHRDLKPSNIVVKSDCTLKILDFGLA---RTAGTSFMMVPFVVTRYY 193
Query: 502 LAPEYFMHGKVSEKIDVYAFGIVLLELLSG 531
APE + E +D+++ G ++ E++ G
Sbjct: 194 RAPEVILGMGYKENVDIWSVGCIMGEMIKG 223
>pdb|3QFV|A Chain A, Mrck Beta In Complex With Tpca-1
pdb|3QFV|B Chain B, Mrck Beta In Complex With Tpca-1
Length = 415
Score = 48.9 bits (115), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 49/167 (29%), Positives = 80/167 (47%), Gaps = 24/167 (14%)
Query: 380 ITALHHRNIISLFGFCFED-NNLLLVYDFLSRGSLEENLHGNKKDGNAFGWTERYKVAVG 438
ITALH + F+D N+L LV D+ G L L +K + R+ +
Sbjct: 136 ITALH---------YAFQDENHLYLVMDYYVGGDLLTLL--SKFEDKLPEDMARFYIGEM 184
Query: 439 VAEALDYLHNSCEQPVIHKDVKSSNILLSDDFEPQLSDFGLASWLSTSSSHLTCTDVA-G 497
V A+D +H + +H+D+K N+LL + +L+DFG S L + + VA G
Sbjct: 185 VL-AIDSIH---QLHYVHRDIKPDNVLLDVNGHIRLADFG--SCLKMNDDGTVQSSVAVG 238
Query: 498 TFGYLAPEYFM-----HGKVSEKIDVYAFGIVLLELLSGKKPINSEN 539
T Y++PE GK + D ++ G+ + E+L G+ P +E+
Sbjct: 239 TPDYISPEILQAMEDGMGKYGPECDWWSLGVCMYEMLYGETPFYAES 285
>pdb|2X0G|A Chain A, X-ray Structure Of A Dap-kinase Calmodulin Complex
Length = 334
Score = 48.9 bits (115), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 39/164 (23%), Positives = 77/164 (46%), Gaps = 14/164 (8%)
Query: 376 EIEIITALHHRNIISLFGFCFEDNNLLLVYDFLSRGSLEENLHGNKKDGNAFGWTERYKV 435
E+ I+ + H N+I+L +++L+ + ++ G L + L + + E +
Sbjct: 64 EVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFL----AEKESLTEEEATEF 119
Query: 436 AVGVAEALDYLHNSCEQPVIHKDVKSSNILLSDDFEPQ----LSDFGLASWLSTSSSHLT 491
+ + YLH+ + H D+K NI+L D P+ + DFGLA + +
Sbjct: 120 LKQILNGVYYLHS---LQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEF-- 174
Query: 492 CTDVAGTFGYLAPEYFMHGKVSEKIDVYAFGIVLLELLSGKKPI 535
++ GT ++APE + + + D+++ G++ LLSG P
Sbjct: 175 -KNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPF 217
>pdb|3MH0|A Chain A, Mutagenesis Of P38 Map Kinase Eshtablishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3O8T|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg-Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 48.9 bits (115), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 52/205 (25%), Positives = 96/205 (46%), Gaps = 25/205 (12%)
Query: 339 VGKGGHSHVYRGC-LPDGKELAVKIL-KPSEDVL--KEFASEIEIITALHHRNIISLFGF 394
VG G + V G +AVK L +P + ++ K E+ ++ + H N+I L
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 89
Query: 395 CF------EDNNLLLVYDFLSRGSLEENLHGNKKDGNAFGWTERYKVAVGVAEALDYLHN 448
E N++ LV + G+ N+ +K + Y++ G L Y+H+
Sbjct: 90 FTPARSLEEFNDVYLVTHLM--GADLNNIVKCQKLTDDHVQFLIYQILRG----LKYIHS 143
Query: 449 SCEQPVIHKDVKSSNILLSDDFEPQLSDFGLASWLSTSSSHLTCTDVAGTFGYLAPEYFM 508
+ +IH+D+K SN+ +++D E ++ D GLA T T Y APE +
Sbjct: 144 A---DIIHRDLKPSNLAVNEDCELKILDAGLARHTDDE-----MTGYVATRWYRAPEIML 195
Query: 509 HG-KVSEKIDVYAFGIVLLELLSGK 532
+ ++ +D+++ G ++ ELL+G+
Sbjct: 196 NWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|4AS0|A Chain A, Cyclometalated Phthalimides As Protein Kinase Inhibitors
Length = 273
Score = 48.9 bits (115), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 40/138 (28%), Positives = 68/138 (49%), Gaps = 24/138 (17%)
Query: 404 VYDFLS-RGSLEENLHGNKKDGNAFGWTERYKVAVGVAEALDYLHNSCEQPVIHKDVKSS 462
++DF++ RG+L+E L +F W V EA+ + HN V+H+D+K
Sbjct: 97 LFDFITERGALQEEL------ARSFFWQ--------VLEAVRHCHNCG---VLHRDIKDE 139
Query: 463 NILLS-DDFEPQLSDFGLASWLSTSSSHLTCTDVAGTFGYLAPEYFMHGKVSEK-IDVYA 520
NIL+ + E +L DFG + L + TD GT Y PE+ + + + V++
Sbjct: 140 NILIDLNRGELKLIDFGSGALLKDT----VYTDFDGTRVYSPPEWIRYHRYHGRSAAVWS 195
Query: 521 FGIVLLELLSGKKPINSE 538
GI+L +++ G P +
Sbjct: 196 LGILLYDMVCGDIPFEHD 213
>pdb|3TKU|A Chain A, Mrck Beta In Complex With Fasudil
pdb|3TKU|B Chain B, Mrck Beta In Complex With Fasudil
Length = 433
Score = 48.9 bits (115), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 49/167 (29%), Positives = 80/167 (47%), Gaps = 24/167 (14%)
Query: 380 ITALHHRNIISLFGFCFED-NNLLLVYDFLSRGSLEENLHGNKKDGNAFGWTERYKVAVG 438
ITALH + F+D N+L LV D+ G L L +K + R+ +
Sbjct: 152 ITALH---------YAFQDENHLYLVMDYYVGGDLLTLL--SKFEDKLPEDMARFYIGEM 200
Query: 439 VAEALDYLHNSCEQPVIHKDVKSSNILLSDDFEPQLSDFGLASWLSTSSSHLTCTDVA-G 497
V A+D +H + +H+D+K N+LL + +L+DFG S L + + VA G
Sbjct: 201 VL-AIDSIH---QLHYVHRDIKPDNVLLDVNGHIRLADFG--SCLKMNDDGTVQSSVAVG 254
Query: 498 TFGYLAPEYFM-----HGKVSEKIDVYAFGIVLLELLSGKKPINSEN 539
T Y++PE GK + D ++ G+ + E+L G+ P +E+
Sbjct: 255 TPDYISPEILQAMEDGMGKYGPECDWWSLGVCMYEMLYGETPFYAES 301
>pdb|3LM0|A Chain A, Crystal Structure Of Human SerineTHREONINE KINASE 17B
(STK17B)
pdb|3LM5|A Chain A, Crystal Structure Of Human SerineTHREONINE KINASE 17B
(STK17B) IN Complex With Quercetin
Length = 327
Score = 48.9 bits (115), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 52/218 (23%), Positives = 97/218 (44%), Gaps = 34/218 (15%)
Query: 339 VGKGGHSHVYRGCLPD--GKELAVKILKP---SEDVLKEFASEIEII-TALHHRNIISLF 392
+G+G + V R C+ G+E A K LK +D E EI ++ A +I+L
Sbjct: 37 LGRGKFA-VVRQCISKSTGQEYAAKFLKKRRRGQDCRAEILHEIAVLELAKSCPRVINLH 95
Query: 393 GFCFEDNNLLLVYDFLSRGS--------LEENLHGNKKDGNAFGWTERYKVAVGVAEALD 444
+ ++L+ ++ + G L E + N + ++ + E +
Sbjct: 96 EVYENTSEIILILEYAAGGEIFSLCLPELAEMVSEN----------DVIRLIKQILEGVY 145
Query: 445 YLHNSCEQPVIHKDVKSSNILLSDDF---EPQLSDFGLASWLSTSSSHLTCTDVAGTFGY 501
YLH + ++H D+K NILLS + + ++ DFG++ + + ++ GT Y
Sbjct: 146 YLH---QNNIVHLDLKPQNILLSSIYPLGDIKIVDFGMSRKIGHACE---LREIMGTPEY 199
Query: 502 LAPEYFMHGKVSEKIDVYAFGIVLLELLSGKKPINSEN 539
LAPE + ++ D++ GI+ LL+ P E+
Sbjct: 200 LAPEILNYDPITTATDMWNIGIIAYMLLTHTSPFVGED 237
>pdb|2XZS|A Chain A, Death Associated Protein Kinase 1 Residues 1-312
pdb|2XZS|B Chain B, Death Associated Protein Kinase 1 Residues 1-312
Length = 312
Score = 48.9 bits (115), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 39/164 (23%), Positives = 77/164 (46%), Gaps = 14/164 (8%)
Query: 376 EIEIITALHHRNIISLFGFCFEDNNLLLVYDFLSRGSLEENLHGNKKDGNAFGWTERYKV 435
E+ I+ + H N+I+L +++L+ + ++ G L + L + + E +
Sbjct: 64 EVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFL----AEKESLTEEEATEF 119
Query: 436 AVGVAEALDYLHNSCEQPVIHKDVKSSNILLSDDFEPQ----LSDFGLASWLSTSSSHLT 491
+ + YLH+ + H D+K NI+L D P+ + DFGLA + +
Sbjct: 120 LKQILNGVYYLHSL---QIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNE--- 173
Query: 492 CTDVAGTFGYLAPEYFMHGKVSEKIDVYAFGIVLLELLSGKKPI 535
++ GT ++APE + + + D+++ G++ LLSG P
Sbjct: 174 FKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPF 217
>pdb|3MH3|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3OBJ|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Mutants In
Response To Inhibitor Binding
Length = 360
Score = 48.9 bits (115), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 52/205 (25%), Positives = 96/205 (46%), Gaps = 25/205 (12%)
Query: 339 VGKGGHSHVYRGC-LPDGKELAVKIL-KPSEDVL--KEFASEIEIITALHHRNIISLFGF 394
VG G + V G +AVK L +P + ++ K E+ ++ + H N+I L
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 89
Query: 395 CF------EDNNLLLVYDFLSRGSLEENLHGNKKDGNAFGWTERYKVAVGVAEALDYLHN 448
E N++ LV + G+ N+ +K + Y++ G L Y+H+
Sbjct: 90 FTPARSLEEFNDVYLVTHLM--GADLNNIVKCQKLTDDHVQFLIYQILRG----LKYIHS 143
Query: 449 SCEQPVIHKDVKSSNILLSDDFEPQLSDFGLASWLSTSSSHLTCTDVAGTFGYLAPEYFM 508
+ +IH+D+K SN+ +++D E ++ D GLA T T Y APE +
Sbjct: 144 A---DIIHRDLKPSNLAVNEDCELKILDRGLARHTDDE-----MTGYVATRWYRAPEIML 195
Query: 509 HG-KVSEKIDVYAFGIVLLELLSGK 532
+ ++ +D+++ G ++ ELL+G+
Sbjct: 196 NWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|1IG1|A Chain A, 1.8a X-Ray Structure Of Ternary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue And Mn.
pdb|1JKL|A Chain A, 1.6a X-Ray Structure Of Binary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue
pdb|1JKS|A Chain A, 1.5a X-Ray Structure Of Apo Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKT|A Chain A, Tetragonal Crystal Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKT|B Chain B, Tetragonal Crystal Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKK|A Chain A, 2.4a X-Ray Structure Of Ternary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue And Mg.
pdb|3F5G|A Chain A, Crystal Structure Of Death Associated Protein Kinase In
Complex With Adp And Mg2+
pdb|3EH9|A Chain A, Crystal Structure Of Death Associated Protein Kinase
Complexed With Adp
pdb|3EHA|A Chain A, Crystal Structure Of Death Associated Protein Kinase
Complexed With Amppnp
Length = 294
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 39/164 (23%), Positives = 77/164 (46%), Gaps = 14/164 (8%)
Query: 376 EIEIITALHHRNIISLFGFCFEDNNLLLVYDFLSRGSLEENLHGNKKDGNAFGWTERYKV 435
E+ I+ + H N+I+L +++L+ + ++ G L + L + + E +
Sbjct: 63 EVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFL----AEKESLTEEEATEF 118
Query: 436 AVGVAEALDYLHNSCEQPVIHKDVKSSNILLSDDFEPQ----LSDFGLASWLSTSSSHLT 491
+ + YLH+ + H D+K NI+L D P+ + DFGLA + +
Sbjct: 119 LKQILNGVYYLHSL---QIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNE--- 172
Query: 492 CTDVAGTFGYLAPEYFMHGKVSEKIDVYAFGIVLLELLSGKKPI 535
++ GT ++APE + + + D+++ G++ LLSG P
Sbjct: 173 FKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPF 216
>pdb|3VHK|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Back Pocket Binder
Length = 368
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 27/92 (29%), Positives = 51/92 (55%), Gaps = 3/92 (3%)
Query: 439 VAEALDYLHNSCEQPVIHKDVKSSNILLSDDFEPQLSDFGLASWLSTSSSHLTCTDVAGT 498
VA+ +++L + + IH+D+ + NILLS+ ++ DFGLA + ++ D
Sbjct: 209 VAKGMEFLAS---RKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLP 265
Query: 499 FGYLAPEYFMHGKVSEKIDVYAFGIVLLELLS 530
++APE + + DV++FG++L E+ S
Sbjct: 266 LKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 297
Score = 30.8 bits (68), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 19/72 (26%), Positives = 39/72 (54%), Gaps = 4/72 (5%)
Query: 356 KELAVKILK--PSEDVLKEFASEIEIITAL-HHRNIISLFGFCFEDNN-LLLVYDFLSRG 411
+ +AVK+LK + + SE++I+ + HH N+++L G C + L+++ +F G
Sbjct: 60 RTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFG 119
Query: 412 SLEENLHGNKKD 423
+L L + +
Sbjct: 120 NLSTYLRSKRNE 131
>pdb|3GU4|A Chain A, Crystal Structure Of Dapkq23v-Amppnp
pdb|3GU5|A Chain A, Crystal Structure Of Dapkq23v-Amppnp-Mg2+
pdb|3GU6|A Chain A, Crystal Structure Of Dapkq23v-Adp
pdb|3GU7|A Chain A, Crystal Structure Of Dapkq23v-Adp-Mg2+
Length = 295
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 39/164 (23%), Positives = 77/164 (46%), Gaps = 14/164 (8%)
Query: 376 EIEIITALHHRNIISLFGFCFEDNNLLLVYDFLSRGSLEENLHGNKKDGNAFGWTERYKV 435
E+ I+ + H N+I+L +++L+ + ++ G L + L + + E +
Sbjct: 64 EVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFL----AEKESLTEEEATEF 119
Query: 436 AVGVAEALDYLHNSCEQPVIHKDVKSSNILLSDDFEPQ----LSDFGLASWLSTSSSHLT 491
+ + YLH+ + H D+K NI+L D P+ + DFGLA + +
Sbjct: 120 LKQILNGVYYLHS---LQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNE--- 173
Query: 492 CTDVAGTFGYLAPEYFMHGKVSEKIDVYAFGIVLLELLSGKKPI 535
++ GT ++APE + + + D+++ G++ LLSG P
Sbjct: 174 FKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPF 217
>pdb|1H8F|A Chain A, Glycogen Synthase Kinase 3 Beta.
pdb|1H8F|B Chain B, Glycogen Synthase Kinase 3 Beta
Length = 352
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 59/209 (28%), Positives = 93/209 (44%), Gaps = 29/209 (13%)
Query: 338 LVGKGGHSHVYRGCLPDGKELAV--KILKPSEDVLKEFAS-EIEIITALHHRNIISLFGF 394
++G G VY+ L D EL K+L+ K F + E++I+ L H NI+ L F
Sbjct: 27 VIGNGSFGVVYQAKLCDSGELVAIKKVLQG-----KAFKNRELQIMRKLDHCNIVRLRYF 81
Query: 395 CFEDNN------LLLVYDFLSRGSLEENLHGNK-KDGNAFGWTERYKVAVGVAEALDYLH 447
+ L LV D++ H ++ K + + Y + +L Y+H
Sbjct: 82 FYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQL--FRSLAYIH 139
Query: 448 NSCEQPVIHKDVKSSNILLSDDFEP-QLSDFGLASWLSTSSSHLT--CTDVAGTFGYLAP 504
+ + H+D+K N+LL D +L DFG A L +++ C+ Y AP
Sbjct: 140 SFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICSRY-----YRAP 191
Query: 505 EY-FMHGKVSEKIDVYAFGIVLLELLSGK 532
E F + IDV++ G VL ELL G+
Sbjct: 192 ELIFGATDYTSSIDVWSAGCVLAELLLGQ 220
>pdb|1Y6A|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
2-Anilino-5-Aryl-Oxazole Inhibitor
pdb|1Y6B|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
2-Anilino-5-Aryl-Oxazole Inhibitor
Length = 366
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 27/92 (29%), Positives = 51/92 (55%), Gaps = 3/92 (3%)
Query: 439 VAEALDYLHNSCEQPVIHKDVKSSNILLSDDFEPQLSDFGLASWLSTSSSHLTCTDVAGT 498
VA+ +++L + + IH+D+ + NILLS+ ++ DFGLA + ++ D
Sbjct: 207 VAKGMEFLAS---RKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLP 263
Query: 499 FGYLAPEYFMHGKVSEKIDVYAFGIVLLELLS 530
++APE + + DV++FG++L E+ S
Sbjct: 264 LKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 295
Score = 30.8 bits (68), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 19/72 (26%), Positives = 39/72 (54%), Gaps = 4/72 (5%)
Query: 356 KELAVKILK--PSEDVLKEFASEIEIITAL-HHRNIISLFGFCFEDNN-LLLVYDFLSRG 411
+ +AVK+LK + + SE++I+ + HH N+++L G C + L+++ +F G
Sbjct: 58 RTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFG 117
Query: 412 SLEENLHGNKKD 423
+L L + +
Sbjct: 118 NLSTYLRSKRNE 129
>pdb|1P4F|A Chain A, Death Associated Protein Kinase Catalytic Domain With
Bound Inhibitor Fragment
Length = 293
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 39/164 (23%), Positives = 77/164 (46%), Gaps = 14/164 (8%)
Query: 376 EIEIITALHHRNIISLFGFCFEDNNLLLVYDFLSRGSLEENLHGNKKDGNAFGWTERYKV 435
E+ I+ + H N+I+L +++L+ + ++ G L + L + + E +
Sbjct: 63 EVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFL----AEKESLTEEEATEF 118
Query: 436 AVGVAEALDYLHNSCEQPVIHKDVKSSNILLSDDFEPQ----LSDFGLASWLSTSSSHLT 491
+ + YLH+ + H D+K NI+L D P+ + DFGLA + +
Sbjct: 119 LKQILNGVYYLHSL---QIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNE--- 172
Query: 492 CTDVAGTFGYLAPEYFMHGKVSEKIDVYAFGIVLLELLSGKKPI 535
++ GT ++APE + + + D+++ G++ LLSG P
Sbjct: 173 FKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPF 216
>pdb|3VID|A Chain A, Crystal Structure Of Human Vegfr2 Kinase Domain With
Compound A
Length = 356
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 27/92 (29%), Positives = 51/92 (55%), Gaps = 3/92 (3%)
Query: 439 VAEALDYLHNSCEQPVIHKDVKSSNILLSDDFEPQLSDFGLASWLSTSSSHLTCTDVAGT 498
VA+ +++L + + IH+D+ + NILLS+ ++ DFGLA + ++ D
Sbjct: 200 VAKGMEFLAS---RKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLP 256
Query: 499 FGYLAPEYFMHGKVSEKIDVYAFGIVLLELLS 530
++APE + + DV++FG++L E+ S
Sbjct: 257 LKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 288
Score = 30.8 bits (68), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 19/72 (26%), Positives = 39/72 (54%), Gaps = 4/72 (5%)
Query: 356 KELAVKILK--PSEDVLKEFASEIEIITAL-HHRNIISLFGFCFEDNN-LLLVYDFLSRG 411
+ +AVK+LK + + SE++I+ + HH N+++L G C + L+++ +F G
Sbjct: 51 RTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFG 110
Query: 412 SLEENLHGNKKD 423
+L L + +
Sbjct: 111 NLSTYLRSKRNE 122
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.314 0.132 0.380
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 19,696,894
Number of Sequences: 62578
Number of extensions: 812687
Number of successful extensions: 4192
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 865
Number of HSP's successfully gapped in prelim test: 231
Number of HSP's that attempted gapping in prelim test: 2033
Number of HSP's gapped (non-prelim): 1141
length of query: 678
length of database: 14,973,337
effective HSP length: 105
effective length of query: 573
effective length of database: 8,402,647
effective search space: 4814716731
effective search space used: 4814716731
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (22.0 bits)
S2: 55 (25.8 bits)