BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 041757
(381 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|3TL8|A Chain A, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|D Chain D, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|G Chain G, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|H Chain H, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
Length = 349
Score = 105 bits (263), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 89/325 (27%), Positives = 143/325 (44%), Gaps = 50/325 (15%)
Query: 21 IEVGKLKNLEILDV---SRNMLEENLISAGTFG-----------------FSHLRRQGAF 60
+ +G+LK + ++ S N +N++ G FG R QG
Sbjct: 20 VHLGQLKRFSLRELQVASDNFSNKNILGRGGFGKVYKGRLADGTLVAVKRLKEERXQGGE 79
Query: 61 KSFIAECKALRNIRHRNLIKVLTACLGVDYQGNDFKALVYEFMHNRSLKEWLYPISKEDE 120
F E + + HRNL+++ C+ + LVY +M N S+ L +
Sbjct: 80 LQFQTEVEMISMAVHRNLLRLRGFCMTPTE-----RLLVYPYMANGSVASCLRERPESQP 134
Query: 121 TYKRPXXXXXXXXXXIAIDVASALNYLHHDCQPVTAHCVLKPSNVLLDDDMTARVGDFGL 180
P IA+ A L YLH C P H +K +N+LLD++ A VGDFGL
Sbjct: 135 PLDWPKRQR------IALGSARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGL 188
Query: 181 ARFLPPTRTQTSSIDVKGSIGYIAPEYGVGNEVSTIGDVYSYGILLLELMIREKPSDIMF 240
A+ + V+G+IG+IAPEY + S DV+ YG++LLEL+ ++ D+
Sbjct: 189 AKLMDYKDXHVXXA-VRGTIGHIAPEYLSTGKSSEKTDVFGYGVMLLELITGQRAFDL-- 245
Query: 241 EGDMNLHKFAKMALSNHVK--DIVDSILLNDDEKLVVRGDQKQTQAKINIIRECVISMVR 298
A++A + V D V +L + +V D + N E V +++
Sbjct: 246 ---------ARLANDDDVMLLDWVKGLLKEKKLEALVDVD-----LQGNYKDEEVEQLIQ 291
Query: 299 IGVACSMESPQDRMKMTNVVHELQS 323
+ + C+ SP +R KM+ VV L+
Sbjct: 292 VALLCTQSSPMERPKMSEVVRMLEG 316
>pdb|3UIM|A Chain A, Structural Basis For The Impact Of Phosphorylation On
Plant Receptor- Like Kinase Bak1 Activation
pdb|3ULZ|A Chain A, Crystal Structure Of Apo Bak1
Length = 326
Score = 105 bits (263), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 89/326 (27%), Positives = 142/326 (43%), Gaps = 50/326 (15%)
Query: 20 HIEVGKLKNLEILDV---SRNMLEENLISAGTFG-----------------FSHLRRQGA 59
+ +G+LK + ++ S N +N++ G FG R QG
Sbjct: 11 EVHLGQLKRFSLRELQVASDNFXNKNILGRGGFGKVYKGRLADGXLVAVKRLKEERTQGG 70
Query: 60 FKSFIAECKALRNIRHRNLIKVLTACLGVDYQGNDFKALVYEFMHNRSLKEWLYPISKED 119
F E + + HRNL+++ C+ + LVY +M N S+ L +
Sbjct: 71 ELQFQTEVEMISMAVHRNLLRLRGFCMTPTE-----RLLVYPYMANGSVASCLRERPESQ 125
Query: 120 ETYKRPXXXXXXXXXXIAIDVASALNYLHHDCQPVTAHCVLKPSNVLLDDDMTARVGDFG 179
P IA+ A L YLH C P H +K +N+LLD++ A VGDFG
Sbjct: 126 PPLDWPKRQR------IALGSARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFG 179
Query: 180 LARFLPPTRTQTSSIDVKGSIGYIAPEYGVGNEVSTIGDVYSYGILLLELMIREKPSDIM 239
LA+ + V+G IG+IAPEY + S DV+ YG++LLEL+ ++ D+
Sbjct: 180 LAKLMDYKDXHVXXA-VRGXIGHIAPEYLSTGKSSEKTDVFGYGVMLLELITGQRAFDL- 237
Query: 240 FEGDMNLHKFAKMALSNHVK--DIVDSILLNDDEKLVVRGDQKQTQAKINIIRECVISMV 297
A++A + V D V +L + +V D + N E V ++
Sbjct: 238 ----------ARLANDDDVMLLDWVKGLLKEKKLEALVDVDLQG-----NYKDEEVEQLI 282
Query: 298 RIGVACSMESPQDRMKMTNVVHELQS 323
++ + C+ SP +R KM+ VV L+
Sbjct: 283 QVALLCTQSSPMERPKMSEVVRMLEG 308
>pdb|2OIB|A Chain A, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|B Chain B, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|C Chain C, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|D Chain D, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIC|A Chain A, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|B Chain B, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|C Chain C, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|D Chain D, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OID|A Chain A, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|B Chain B, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|C Chain C, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|D Chain D, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
Length = 301
Score = 71.6 bits (174), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 54/170 (31%), Positives = 85/170 (50%), Gaps = 16/170 (9%)
Query: 61 KSFIAECKALRNIRHRNLIKVLTACLGVDYQGNDFKALVYEFMHNRSLKEWLYPISKEDE 120
+ F E K + +H NL+++L G G+D LVY +M N SL + L S D
Sbjct: 69 QQFDQEIKVMAKCQHENLVELL----GFSSDGDDL-CLVYVYMPNGSLLDRL---SCLDG 120
Query: 121 TYKRPXXXXXXXXXXIAIDVASALNYLHHDCQPVTAHCVLKPSNVLLDDDMTARVGDFGL 180
T IA A+ +N+LH + H +K +N+LLD+ TA++ DFGL
Sbjct: 121 T----PPLSWHMRCKIAQGAANGINFLHENHH---IHRDIKSANILLDEAFTAKISDFGL 173
Query: 181 ARFLPPTRTQTSSIDVKGSIGYIAPEYGVGNEVSTIGDVYSYGILLLELM 230
AR + G+ Y+APE + E++ D+YS+G++LLE++
Sbjct: 174 ARASEKFAQXVMXXRIVGTTAYMAPE-ALRGEITPKSDIYSFGVVLLEII 222
>pdb|2NRU|A Chain A, Crystal Structure Of Irak-4
pdb|2NRU|B Chain B, Crystal Structure Of Irak-4
pdb|2NRU|C Chain C, Crystal Structure Of Irak-4
pdb|2NRU|D Chain D, Crystal Structure Of Irak-4
Length = 307
Score = 71.6 bits (174), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 53/176 (30%), Positives = 85/176 (48%), Gaps = 28/176 (15%)
Query: 61 KSFIAECKALRNIRHRNLIKVLTACLGVDYQGNDFKALVYEFMHNRSLKEWLY------P 114
+ F E K + +H NL+++L G G+D LVY +M N SL + L P
Sbjct: 75 QQFDQEIKVMAKCQHENLVELL----GFSSDGDDL-CLVYVYMPNGSLLDRLSCLDGTPP 129
Query: 115 ISKEDETYKRPXXXXXXXXXXIAIDVASALNYLHHDCQPVTAHCVLKPSNVLLDDDMTAR 174
+S IA A+ +N+LH + H +K +N+LLD+ TA+
Sbjct: 130 LSWH-------------MRCKIAQGAANGINFLHENHH---IHRDIKSANILLDEAFTAK 173
Query: 175 VGDFGLARFLPPTRTQTSSIDVKGSIGYIAPEYGVGNEVSTIGDVYSYGILLLELM 230
+ DFGLAR + G+ Y+APE + E++ D+YS+G++LLE++
Sbjct: 174 ISDFGLARASEKFAQTVMXXRIVGTTAYMAPE-ALRGEITPKSDIYSFGVVLLEII 228
>pdb|2NRY|A Chain A, Crystal Structure Of Irak-4
pdb|2NRY|B Chain B, Crystal Structure Of Irak-4
pdb|2NRY|C Chain C, Crystal Structure Of Irak-4
pdb|2NRY|D Chain D, Crystal Structure Of Irak-4
Length = 307
Score = 71.2 bits (173), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 53/176 (30%), Positives = 85/176 (48%), Gaps = 28/176 (15%)
Query: 61 KSFIAECKALRNIRHRNLIKVLTACLGVDYQGNDFKALVYEFMHNRSLKEWLY------P 114
+ F E K + +H NL+++L G G+D LVY +M N SL + L P
Sbjct: 75 QQFDQEIKVMAKCQHENLVELL----GFSSDGDDL-CLVYVYMPNGSLLDRLSCLDGTPP 129
Query: 115 ISKEDETYKRPXXXXXXXXXXIAIDVASALNYLHHDCQPVTAHCVLKPSNVLLDDDMTAR 174
+S IA A+ +N+LH + H +K +N+LLD+ TA+
Sbjct: 130 LSWH-------------MRCKIAQGAANGINFLHENHH---IHRDIKSANILLDEAFTAK 173
Query: 175 VGDFGLARFLPPTRTQTSSIDVKGSIGYIAPEYGVGNEVSTIGDVYSYGILLLELM 230
+ DFGLAR + G+ Y+APE + E++ D+YS+G++LLE++
Sbjct: 174 ISDFGLARASEKFAQTVMXSRIVGTTAYMAPE-ALRGEITPKSDIYSFGVVLLEII 228
>pdb|3P86|A Chain A, Crystal Structure Of Ctr1 Kinase Domain Mutant D676n In
Complex With Staurosporine
pdb|3P86|B Chain B, Crystal Structure Of Ctr1 Kinase Domain Mutant D676n In
Complex With Staurosporine
Length = 309
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 51/173 (29%), Positives = 84/173 (48%), Gaps = 15/173 (8%)
Query: 63 FIAECKALRNIRHRNLIKVLTACLGVDYQGNDFKALVYEFMHNRSLKEWLYPISKEDETY 122
F+ E ++ +RH N++ + A Q + ++V E++ SL L+ ++
Sbjct: 81 FLREVAIMKRLRHPNIVLFMGAVT----QPPNL-SIVTEYLSRGSLYRLLHKSGAREQLD 135
Query: 123 KRPXXXXXXXXXXIAIDVASALNYLHHDCQPVTAHCVLKPSNVLLDDDMTARVGDFGLAR 182
+R +A DVA +NYLH+ P+ H LK N+L+D T +V DFGL+R
Sbjct: 136 ER-------RRLSMAYDVAKGMNYLHNRNPPIV-HRNLKSPNLLVDKKYTVKVCDFGLSR 187
Query: 183 FLPPTRTQTSSIDVKGSIGYIAPEYGVGNEVSTIGDVYSYGILLLELMIREKP 235
T SS G+ ++APE + DVYS+G++L EL ++P
Sbjct: 188 LK--ASTFLSSKSAAGTPEWMAPEVLRDEPSNEKSDVYSFGVILWELATLQQP 238
>pdb|2EVA|A Chain A, Structural Basis For The Interaction Of Tak1 Kinase With
Its Activating Protein Tab1
pdb|2YIY|A Chain A, Crystal Structure Of Compound 8 Bound To Tak1-Tab
Length = 307
Score = 68.6 bits (166), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 62/224 (27%), Positives = 94/224 (41%), Gaps = 34/224 (15%)
Query: 28 NLEILDVSRNMLEENLISAGTFG-------------FSHLRRQGAFKSFIAECKALRNIR 74
+L ++D +EE ++ G FG + + K+FI E + L +
Sbjct: 1 SLHMIDYKEIEVEE-VVGRGAFGVVCKAKWRAKDVAIKQIESESERKAFIVELRQLSRVN 59
Query: 75 HRNLIKVLTACLGVDYQGNDFKALVYEFMHNRSLKEWLYPISKEDETYKRPXXXXXXXXX 134
H N++K+ ACL + LV E+ SL L+ E Y
Sbjct: 60 HPNIVKLYGACL-------NPVCLVMEYAEGGSLYNVLH--GAEPLPY-----YTAAHAM 105
Query: 135 XIAIDVASALNYLHHDCQPVTAHCVLKPSNVLLDDDMTA-RVGDFGLARFLPPTRTQTSS 193
+ + + YLH H LKP N+LL T ++ DFG A QT
Sbjct: 106 SWCLQCSQGVAYLHSMQPKALIHRDLKPPNLLLVAGGTVLKICDFGTA-----CDIQTHM 160
Query: 194 IDVKGSIGYIAPEYGVGNEVSTIGDVYSYGILLLELMIREKPSD 237
+ KGS ++APE G+ S DV+S+GI+L E++ R KP D
Sbjct: 161 TNNKGSAAWMAPEVFEGSNYSEKCDVFSWGIILWEVITRRKPFD 204
>pdb|4GS6|A Chain A, Irreversible Inhibition Of Tak1 Kinase By 5z-7-oxozeaenol
Length = 315
Score = 68.6 bits (166), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 62/224 (27%), Positives = 94/224 (41%), Gaps = 34/224 (15%)
Query: 28 NLEILDVSRNMLEENLISAGTFG-------------FSHLRRQGAFKSFIAECKALRNIR 74
+L ++D +EE ++ G FG + + K+FI E + L +
Sbjct: 2 SLHMIDYKEIEVEE-VVGRGAFGVVCKAKWRAKDVAIKQIESESERKAFIVELRQLSRVN 60
Query: 75 HRNLIKVLTACLGVDYQGNDFKALVYEFMHNRSLKEWLYPISKEDETYKRPXXXXXXXXX 134
H N++K+ ACL + LV E+ SL L+ E Y
Sbjct: 61 HPNIVKLYGACL-------NPVCLVMEYAEGGSLYNVLH--GAEPLPY-----YTAAHAM 106
Query: 135 XIAIDVASALNYLHHDCQPVTAHCVLKPSNVLLDDDMTA-RVGDFGLARFLPPTRTQTSS 193
+ + + YLH H LKP N+LL T ++ DFG A QT
Sbjct: 107 SWCLQCSQGVAYLHSMQPKALIHRDLKPPNLLLVAGGTVLKICDFGTA-----CDIQTHM 161
Query: 194 IDVKGSIGYIAPEYGVGNEVSTIGDVYSYGILLLELMIREKPSD 237
+ KGS ++APE G+ S DV+S+GI+L E++ R KP D
Sbjct: 162 TNNKGSAAWMAPEVFEGSNYSEKCDVFSWGIILWEVITRRKPFD 205
>pdb|2O8Y|A Chain A, Apo Irak4 Kinase Domain
pdb|2O8Y|B Chain B, Apo Irak4 Kinase Domain
Length = 298
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 52/176 (29%), Positives = 82/176 (46%), Gaps = 28/176 (15%)
Query: 61 KSFIAECKALRNIRHRNLIKVLTACLGVDYQGNDFKALVYEFMHNRSLKEWLY------P 114
+ F E K +H NL+++L G G+D LVY + N SL + L P
Sbjct: 66 QQFDQEIKVXAKCQHENLVELL----GFSSDGDDL-CLVYVYXPNGSLLDRLSCLDGTPP 120
Query: 115 ISKEDETYKRPXXXXXXXXXXIAIDVASALNYLHHDCQPVTAHCVLKPSNVLLDDDMTAR 174
+S IA A+ +N+LH + H +K +N+LLD+ TA+
Sbjct: 121 LSWHXRC-------------KIAQGAANGINFLHENHH---IHRDIKSANILLDEAFTAK 164
Query: 175 VGDFGLARFLPPTRTQTSSIDVKGSIGYIAPEYGVGNEVSTIGDVYSYGILLLELM 230
+ DFGLAR + G+ Y APE + E++ D+YS+G++LLE++
Sbjct: 165 ISDFGLARASEKFAQXVXXSRIVGTTAYXAPE-ALRGEITPKSDIYSFGVVLLEII 219
>pdb|4EQM|A Chain A, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|B Chain B, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|C Chain C, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|D Chain D, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|E Chain E, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|F Chain F, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
Length = 294
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 59/221 (26%), Positives = 103/221 (46%), Gaps = 51/221 (23%)
Query: 55 RRQGAFKSFIAECKALRNIRHRNLIKVLTACLGVDYQGNDFKALVYEFMHNRSLKEWLYP 114
++ K F E + H+N++ + + VD + +D LV E++ +L E++
Sbjct: 50 EKEETLKRFEREVHNSSQLSHQNIV----SMIDVD-EEDDCYYLVMEYIEGPTLSEYI-- 102
Query: 115 ISKEDETYKRPXXXXXXXXXXIAIDVASALNYLH---------HDCQPVTAHCVLKPSNV 165
E++ + V +A+N+ + HD + V H +KP N+
Sbjct: 103 -----ESHG-------------PLSVDTAINFTNQILDGIKHAHDMRIV--HRDIKPQNI 142
Query: 166 LLDDDMTARVGDFGLARFLPPTR-TQTSSIDVKGSIGYIAPEYGVGNEVSTIGDVYSYGI 224
L+D + T ++ DFG+A+ L T TQT+ V G++ Y +PE G D+YS GI
Sbjct: 143 LIDSNKTLKIFDFGIAKALSETSLTQTNH--VLGTVQYFSPEQAKGEATDECTDIYSIGI 200
Query: 225 LLLELMIREKPSDIMFEGDMNLHKFAKMALSNHVKDIVDSI 265
+L E+++ E P F G+ A+S +K I DS+
Sbjct: 201 VLYEMLVGEPP----FNGE--------TAVSIAIKHIQDSV 229
>pdb|3OMV|A Chain A, Crystal Structure Of C-Raf (Raf-1)
pdb|3OMV|B Chain B, Crystal Structure Of C-Raf (Raf-1)
Length = 307
Score = 65.9 bits (159), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 53/179 (29%), Positives = 80/179 (44%), Gaps = 21/179 (11%)
Query: 60 FKSFIAECKALRNIRHRNLIKVLTACLGVDYQGNDFKALVYEFMHNRSLKEWLYPISKED 119
F++F E LR RH N++ L + Y D A+V ++ SL + L+ +
Sbjct: 76 FQAFRNEVAVLRKTRHVNIL------LFMGYMTKDNLAIVTQWCEGSSLYKHLHVQETKF 129
Query: 120 ETYKRPXXXXXXXXXXIAIDVASALNYLHHDCQPVTAHCVLKPSNVLLDDDMTARVGDFG 179
+ ++ IA A ++YLH H +K +N+ L + +T ++GDFG
Sbjct: 130 QMFQ---------LIDIARQTAQGMDYLHAKN---IIHRDMKSNNIFLHEGLTVKIGDFG 177
Query: 180 LARFLPPTRTQTSSIDVKGSIGYIAPE---YGVGNEVSTIGDVYSYGILLLELMIREKP 235
LA GS+ ++APE N S DVYSYGI+L ELM E P
Sbjct: 178 LATVKSRWSGSQQVEQPTGSVLWMAPEVIRMQDNNPFSFQSDVYSYGIVLYELMTGELP 236
>pdb|3PPZ|A Chain A, Crystal Structure Of Ctr1 Kinase Domain In Complex With
Staurosporine
pdb|3PPZ|B Chain B, Crystal Structure Of Ctr1 Kinase Domain In Complex With
Staurosporine
Length = 309
Score = 65.5 bits (158), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 49/173 (28%), Positives = 82/173 (47%), Gaps = 15/173 (8%)
Query: 63 FIAECKALRNIRHRNLIKVLTACLGVDYQGNDFKALVYEFMHNRSLKEWLYPISKEDETY 122
F+ E ++ +RH N++ + A Q + ++V E++ SL L+ ++
Sbjct: 81 FLREVAIMKRLRHPNIVLFMGAVT----QPPNL-SIVTEYLSRGSLYRLLHKSGAREQLD 135
Query: 123 KRPXXXXXXXXXXIAIDVASALNYLHHDCQPVTAHCVLKPSNVLLDDDMTARVGDFGLAR 182
+R +A DVA +NYLH+ P+ H LK N+L+D T +V DFGL+R
Sbjct: 136 ER-------RRLSMAYDVAKGMNYLHNRNPPIV-HRDLKSPNLLVDKKYTVKVCDFGLSR 187
Query: 183 FLPPTRTQTSSIDVKGSIGYIAPEYGVGNEVSTIGDVYSYGILLLELMIREKP 235
S G+ ++APE + DVYS+G++L EL ++P
Sbjct: 188 LK--ASXFLXSKXAAGTPEWMAPEVLRDEPSNEKSDVYSFGVILWELATLQQP 238
>pdb|3II5|A Chain A, The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimidine
Inhibitor
pdb|3II5|B Chain B, The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimidine
Inhibitor
Length = 306
Score = 65.1 bits (157), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 54/179 (30%), Positives = 79/179 (44%), Gaps = 21/179 (11%)
Query: 60 FKSFIAECKALRNIRHRNLIKVLTACLGVDYQGNDFKALVYEFMHNRSLKEWLYPISKED 119
++F E LR RH N++ L + Y A+V ++ SL L+ I +
Sbjct: 75 LQAFKNEVGVLRKTRHVNIL------LFMGYSTKPQLAIVTQWCEGSSLYHHLHIIETKF 128
Query: 120 ETYKRPXXXXXXXXXXIAIDVASALNYLHHDCQPVTAHCVLKPSNVLLDDDMTARVGDFG 179
E K IA A ++YLH H LK +N+ L +D+T ++GDFG
Sbjct: 129 EMIK---------LIDIARQTAQGMDYLHAKS---IIHRDLKSNNIFLHEDLTVKIGDFG 176
Query: 180 LARFLPPTRTQTSSIDVKGSIGYIAPE---YGVGNEVSTIGDVYSYGILLLELMIREKP 235
LA + GSI ++APE N S DVY++GI+L ELM + P
Sbjct: 177 LATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLP 235
>pdb|3D4Q|A Chain A, Pyrazole-Based Inhibitors Of B-Raf Kinase
pdb|3D4Q|B Chain B, Pyrazole-Based Inhibitors Of B-Raf Kinase
pdb|3PSB|A Chain A, Furo[2,3-C]pyridine-Based Indanone Oximes As Potent And
Selective B- Raf Inhibitors
pdb|3PSB|B Chain B, Furo[2,3-C]pyridine-Based Indanone Oximes As Potent And
Selective B- Raf Inhibitors
pdb|3PPJ|A Chain A, Human B-Raf Kinase In Complex With A Furopyridine
Inhibitor
pdb|3PPJ|B Chain B, Human B-Raf Kinase In Complex With A Furopyridine
Inhibitor
pdb|3PPK|A Chain A, Human B-Raf Kinase In Complex With A Non-Oxime
Furopyridine Inhibitor
pdb|3PPK|B Chain B, Human B-Raf Kinase In Complex With A Non-Oxime
Furopyridine Inhibitor
pdb|3PRF|A Chain A, Crystal Structure Of Human B-Raf Kinase Domain In Complex
With A Non- Oxime Furopyridine Inhibitor
pdb|3PRF|B Chain B, Crystal Structure Of Human B-Raf Kinase Domain In Complex
With A Non- Oxime Furopyridine Inhibitor
pdb|3PRI|A Chain A, Crystal Structure Of Human B-Raf Kinase In Complex With A
Non-Oxime Furopyridine Inhibitor
pdb|3PRI|B Chain B, Crystal Structure Of Human B-Raf Kinase In Complex With A
Non-Oxime Furopyridine Inhibitor
pdb|3Q4C|A Chain A, Crystal Structure Of Wild Type Braf Kinase Domain In
Complex With Organometallic Inhibitor Cns292
pdb|3Q4C|B Chain B, Crystal Structure Of Wild Type Braf Kinase Domain In
Complex With Organometallic Inhibitor Cns292
pdb|3PSD|A Chain A, Non-Oxime Pyrazole Based Inhibitors Of B-Raf Kinase
pdb|3PSD|B Chain B, Non-Oxime Pyrazole Based Inhibitors Of B-Raf Kinase
pdb|3SKC|A Chain A, Human B-Raf Kinase In Complex With An Amide Linked
Pyrazolopyridine Inhibitor
pdb|3SKC|B Chain B, Human B-Raf Kinase In Complex With An Amide Linked
Pyrazolopyridine Inhibitor
pdb|3TV4|A Chain A, Human B-Raf Kinase Domain In Complex With An Bromopyridine
Benzamide Inhibitor
pdb|3TV4|B Chain B, Human B-Raf Kinase Domain In Complex With An Bromopyridine
Benzamide Inhibitor
pdb|3TV6|A Chain A, Human B-Raf Kinase Domain In Complex With A
Methoxypyrazolopyridinyl Benzamide Inhibitor
pdb|3TV6|B Chain B, Human B-Raf Kinase Domain In Complex With A
Methoxypyrazolopyridinyl Benzamide Inhibitor
pdb|4E26|A Chain A, Braf In Complex With An Organic Inhibitor 7898734
pdb|4E26|B Chain B, Braf In Complex With An Organic Inhibitor 7898734
pdb|4E4X|A Chain A, Crystal Structure Of B-Raf Kinase Domain In Complex With A
Dihydropyrido[2,3-D]pyrimidinone-Based Inhibitor
pdb|4E4X|B Chain B, Crystal Structure Of B-Raf Kinase Domain In Complex With A
Dihydropyrido[2,3-D]pyrimidinone-Based Inhibitor
pdb|4G9C|A Chain A, Human B-Raf Kinase Domain Bound To A Type Ii
Pyrazolopyridine Inhibitor
pdb|4G9C|B Chain B, Human B-Raf Kinase Domain Bound To A Type Ii
Pyrazolopyridine Inhibitor
Length = 307
Score = 64.7 bits (156), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 54/179 (30%), Positives = 79/179 (44%), Gaps = 21/179 (11%)
Query: 60 FKSFIAECKALRNIRHRNLIKVLTACLGVDYQGNDFKALVYEFMHNRSLKEWLYPISKED 119
++F E LR RH N++ L + Y A+V ++ SL L+ I +
Sbjct: 76 LQAFKNEVGVLRKTRHVNIL------LFMGYSTKPQLAIVTQWCEGSSLYHHLHIIETKF 129
Query: 120 ETYKRPXXXXXXXXXXIAIDVASALNYLHHDCQPVTAHCVLKPSNVLLDDDMTARVGDFG 179
E K IA A ++YLH H LK +N+ L +D+T ++GDFG
Sbjct: 130 EMIK---------LIDIARQTAQGMDYLHAKS---IIHRDLKSNNIFLHEDLTVKIGDFG 177
Query: 180 LARFLPPTRTQTSSIDVKGSIGYIAPE---YGVGNEVSTIGDVYSYGILLLELMIREKP 235
LA + GSI ++APE N S DVY++GI+L ELM + P
Sbjct: 178 LATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLP 236
>pdb|3Q96|A Chain A, B-Raf Kinase Domain In Complex With A
Tetrahydronaphthalene Inhibitor
pdb|3Q96|B Chain B, B-Raf Kinase Domain In Complex With A
Tetrahydronaphthalene Inhibitor
Length = 282
Score = 64.7 bits (156), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 54/179 (30%), Positives = 79/179 (44%), Gaps = 21/179 (11%)
Query: 60 FKSFIAECKALRNIRHRNLIKVLTACLGVDYQGNDFKALVYEFMHNRSLKEWLYPISKED 119
++F E LR RH N++ L + Y A+V ++ SL L+ I +
Sbjct: 50 LQAFKNEVGVLRKTRHVNIL------LFMGYSTKPQLAIVTQWCEGSSLYHHLHIIETKF 103
Query: 120 ETYKRPXXXXXXXXXXIAIDVASALNYLHHDCQPVTAHCVLKPSNVLLDDDMTARVGDFG 179
E K IA A ++YLH H LK +N+ L +D+T ++GDFG
Sbjct: 104 EMIK---------LIDIARQTAQGMDYLHAKS---IIHRDLKSNNIFLHEDLTVKIGDFG 151
Query: 180 LARFLPPTRTQTSSIDVKGSIGYIAPE---YGVGNEVSTIGDVYSYGILLLELMIREKP 235
LA + GSI ++APE N S DVY++GI+L ELM + P
Sbjct: 152 LATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLP 210
>pdb|2QKW|B Chain B, Structural Basis For Activation Of Plant Immunity By
Bacterial Effector Protein Avrpto
Length = 321
Score = 64.7 bits (156), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 44/157 (28%), Positives = 74/157 (47%), Gaps = 14/157 (8%)
Query: 74 RHRNLIKVLTACLGVDYQGNDFKALVYEFMHNRSLKEWLYPISKEDETYKRPXXXXXXXX 133
RH +L+ ++ C + L+Y++M N +LK LY +
Sbjct: 93 RHPHLVSLIGFC-----DERNEMILIYKYMENGNLKRHLYGSDLPTMS------MSWEQR 141
Query: 134 XXIAIDVASALNYLHHDCQPVTAHCVLKPSNVLLDDDMTARVGDFGLARFLPPTRTQTSS 193
I I A L+YLH H +K N+LLD++ ++ DFG+++
Sbjct: 142 LEICIGAARGLHYLH---TRAIIHRDVKSINILLDENFVPKITDFGISKKGTELDQTHLX 198
Query: 194 IDVKGSIGYIAPEYGVGNEVSTIGDVYSYGILLLELM 230
VKG++GYI PEY + ++ DVYS+G++L E++
Sbjct: 199 XVVKGTLGYIDPEYFIKGRLTEKSDVYSFGVVLFEVL 235
>pdb|2FB8|A Chain A, Structure Of The B-Raf Kinase Domain Bound To Sb-590885
pdb|2FB8|B Chain B, Structure Of The B-Raf Kinase Domain Bound To Sb-590885
Length = 281
Score = 64.7 bits (156), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 54/179 (30%), Positives = 79/179 (44%), Gaps = 21/179 (11%)
Query: 60 FKSFIAECKALRNIRHRNLIKVLTACLGVDYQGNDFKALVYEFMHNRSLKEWLYPISKED 119
++F E LR RH N++ L + Y A+V ++ SL L+ I +
Sbjct: 53 LQAFKNEVGVLRKTRHVNIL------LFMGYSTKPQLAIVTQWCEGSSLYHHLHIIETKF 106
Query: 120 ETYKRPXXXXXXXXXXIAIDVASALNYLHHDCQPVTAHCVLKPSNVLLDDDMTARVGDFG 179
E K IA A ++YLH H LK +N+ L +D+T ++GDFG
Sbjct: 107 EMIK---------LIDIARQTAQGMDYLHAKS---IIHRDLKSNNIFLHEDLTVKIGDFG 154
Query: 180 LARFLPPTRTQTSSIDVKGSIGYIAPE---YGVGNEVSTIGDVYSYGILLLELMIREKP 235
LA + GSI ++APE N S DVY++GI+L ELM + P
Sbjct: 155 LATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLP 213
>pdb|4H58|A Chain A, Braf In Complex With Compound 3
pdb|4H58|B Chain B, Braf In Complex With Compound 3
pdb|4H58|C Chain C, Braf In Complex With Compound 3
Length = 275
Score = 64.7 bits (156), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 54/179 (30%), Positives = 79/179 (44%), Gaps = 21/179 (11%)
Query: 60 FKSFIAECKALRNIRHRNLIKVLTACLGVDYQGNDFKALVYEFMHNRSLKEWLYPISKED 119
++F E LR RH N++ L + Y A+V ++ SL L+ I +
Sbjct: 48 LQAFKNEVGVLRKTRHVNIL------LFMGYSTKPQLAIVTQWCEGSSLYHHLHIIETKF 101
Query: 120 ETYKRPXXXXXXXXXXIAIDVASALNYLHHDCQPVTAHCVLKPSNVLLDDDMTARVGDFG 179
E K IA A ++YLH H LK +N+ L +D+T ++GDFG
Sbjct: 102 EMIK---------LIDIARQTAQGMDYLHAKS---IIHRDLKSNNIFLHEDLTVKIGDFG 149
Query: 180 LARFLPPTRTQTSSIDVKGSIGYIAPE---YGVGNEVSTIGDVYSYGILLLELMIREKP 235
LA + GSI ++APE N S DVY++GI+L ELM + P
Sbjct: 150 LATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLP 208
>pdb|3HGK|A Chain A, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|B Chain B, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|C Chain C, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|D Chain D, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
Length = 327
Score = 64.7 bits (156), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 44/157 (28%), Positives = 74/157 (47%), Gaps = 14/157 (8%)
Query: 74 RHRNLIKVLTACLGVDYQGNDFKALVYEFMHNRSLKEWLYPISKEDETYKRPXXXXXXXX 133
RH +L+ ++ C + L+Y++M N +LK LY +
Sbjct: 93 RHPHLVSLIGFC-----DERNEMILIYKYMENGNLKRHLYGSDLPTMS------MSWEQR 141
Query: 134 XXIAIDVASALNYLHHDCQPVTAHCVLKPSNVLLDDDMTARVGDFGLARFLPPTRTQTSS 193
I I A L+YLH H +K N+LLD++ ++ DFG+++
Sbjct: 142 LEICIGAARGLHYLH---TRAIIHRDVKSINILLDENFVPKITDFGISKKGTELGQTHLX 198
Query: 194 IDVKGSIGYIAPEYGVGNEVSTIGDVYSYGILLLELM 230
VKG++GYI PEY + ++ DVYS+G++L E++
Sbjct: 199 XVVKGTLGYIDPEYFIKGRLTEKSDVYSFGVVLFEVL 235
>pdb|4DBN|A Chain A, Crystal Structure Of The Kinase Domain Of Human B-Raf With
A [1, 3]thiazolo[5,4-B]pyridine Derivative
pdb|4DBN|B Chain B, Crystal Structure Of The Kinase Domain Of Human B-Raf With
A [1, 3]thiazolo[5,4-B]pyridine Derivative
Length = 284
Score = 64.7 bits (156), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 54/179 (30%), Positives = 79/179 (44%), Gaps = 21/179 (11%)
Query: 60 FKSFIAECKALRNIRHRNLIKVLTACLGVDYQGNDFKALVYEFMHNRSLKEWLYPISKED 119
++F E LR RH N++ L + Y A+V ++ SL L+ I +
Sbjct: 53 LQAFKNEVGVLRKTRHVNIL------LFMGYSTKPQLAIVTQWCEGSSLYHHLHIIETKF 106
Query: 120 ETYKRPXXXXXXXXXXIAIDVASALNYLHHDCQPVTAHCVLKPSNVLLDDDMTARVGDFG 179
E K IA A ++YLH H LK +N+ L +D+T ++GDFG
Sbjct: 107 EMIK---------LIDIARQTAQGMDYLHAKS---IIHRDLKSNNIFLHEDLTVKIGDFG 154
Query: 180 LARFLPPTRTQTSSIDVKGSIGYIAPE---YGVGNEVSTIGDVYSYGILLLELMIREKP 235
LA + GSI ++APE N S DVY++GI+L ELM + P
Sbjct: 155 LATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLP 213
>pdb|1UWH|A Chain A, The Complex Of Wild Type B-Raf And Bay439006
pdb|1UWH|B Chain B, The Complex Of Wild Type B-Raf And Bay439006
Length = 276
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 54/179 (30%), Positives = 79/179 (44%), Gaps = 21/179 (11%)
Query: 60 FKSFIAECKALRNIRHRNLIKVLTACLGVDYQGNDFKALVYEFMHNRSLKEWLYPISKED 119
++F E LR RH N++ L + Y A+V ++ SL L+ I +
Sbjct: 48 LQAFKNEVGVLRKTRHVNIL------LFMGYSTAPQLAIVTQWCEGSSLYHHLHIIETKF 101
Query: 120 ETYKRPXXXXXXXXXXIAIDVASALNYLHHDCQPVTAHCVLKPSNVLLDDDMTARVGDFG 179
E K IA A ++YLH H LK +N+ L +D+T ++GDFG
Sbjct: 102 EMIK---------LIDIARQTAQGMDYLHAKS---IIHRDLKSNNIFLHEDLTVKIGDFG 149
Query: 180 LARFLPPTRTQTSSIDVKGSIGYIAPE---YGVGNEVSTIGDVYSYGILLLELMIREKP 235
LA + GSI ++APE N S DVY++GI+L ELM + P
Sbjct: 150 LATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLP 208
>pdb|3IDP|A Chain A, B-Raf V600e Kinase Domain In Complex With An
Aminoisoquinoline Inhibitor
pdb|3IDP|B Chain B, B-Raf V600e Kinase Domain In Complex With An
Aminoisoquinoline Inhibitor
Length = 300
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 54/179 (30%), Positives = 79/179 (44%), Gaps = 21/179 (11%)
Query: 60 FKSFIAECKALRNIRHRNLIKVLTACLGVDYQGNDFKALVYEFMHNRSLKEWLYPISKED 119
++F E LR RH N++ L + Y A+V ++ SL L+ I +
Sbjct: 68 LQAFKNEVGVLRKTRHVNIL------LFMGYSTKPQLAIVTQWCEGSSLYHHLHIIETKF 121
Query: 120 ETYKRPXXXXXXXXXXIAIDVASALNYLHHDCQPVTAHCVLKPSNVLLDDDMTARVGDFG 179
E K IA A ++YLH H LK +N+ L +D+T ++GDFG
Sbjct: 122 EMIK---------LIDIARQTAQGMDYLHAKS---IIHRDLKSNNIFLHEDLTVKIGDFG 169
Query: 180 LARFLPPTRTQTSSIDVKGSIGYIAPE---YGVGNEVSTIGDVYSYGILLLELMIREKP 235
LA + GSI ++APE N S DVY++GI+L ELM + P
Sbjct: 170 LATEKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLP 228
>pdb|4G9R|A Chain A, B-Raf V600e Kinase Domain Bound To A Type Ii
Dihydroquinazoline Inhibitor
pdb|4G9R|B Chain B, B-Raf V600e Kinase Domain Bound To A Type Ii
Dihydroquinazoline Inhibitor
Length = 307
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 54/179 (30%), Positives = 79/179 (44%), Gaps = 21/179 (11%)
Query: 60 FKSFIAECKALRNIRHRNLIKVLTACLGVDYQGNDFKALVYEFMHNRSLKEWLYPISKED 119
++F E LR RH N++ L + Y A+V ++ SL L+ I +
Sbjct: 76 LQAFKNEVGVLRKTRHVNIL------LFMGYSTKPQLAIVTQWCEGSSLYHHLHIIETKF 129
Query: 120 ETYKRPXXXXXXXXXXIAIDVASALNYLHHDCQPVTAHCVLKPSNVLLDDDMTARVGDFG 179
E K IA A ++YLH H LK +N+ L +D+T ++GDFG
Sbjct: 130 EMIK---------LIDIARQTAQGMDYLHAKS---IIHRDLKSNNIFLHEDLTVKIGDFG 177
Query: 180 LARFLPPTRTQTSSIDVKGSIGYIAPE---YGVGNEVSTIGDVYSYGILLLELMIREKP 235
LA + GSI ++APE N S DVY++GI+L ELM + P
Sbjct: 178 LATEKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLP 236
>pdb|1UWJ|A Chain A, The Complex Of Mutant V599e B-raf And Bay439006
pdb|1UWJ|B Chain B, The Complex Of Mutant V599e B-raf And Bay439006
Length = 276
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 54/179 (30%), Positives = 79/179 (44%), Gaps = 21/179 (11%)
Query: 60 FKSFIAECKALRNIRHRNLIKVLTACLGVDYQGNDFKALVYEFMHNRSLKEWLYPISKED 119
++F E LR RH N++ L + Y A+V ++ SL L+ I +
Sbjct: 48 LQAFKNEVGVLRKTRHVNIL------LFMGYSTKPQLAIVTQWCEGSSLYHHLHIIETKF 101
Query: 120 ETYKRPXXXXXXXXXXIAIDVASALNYLHHDCQPVTAHCVLKPSNVLLDDDMTARVGDFG 179
E K IA A ++YLH H LK +N+ L +D+T ++GDFG
Sbjct: 102 EMIK---------LIDIARQTAQGMDYLHAKS---IIHRDLKSNNIFLHEDLTVKIGDFG 149
Query: 180 LARFLPPTRTQTSSIDVKGSIGYIAPE---YGVGNEVSTIGDVYSYGILLLELMIREKP 235
LA + GSI ++APE N S DVY++GI+L ELM + P
Sbjct: 150 LATEKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLP 208
>pdb|3V5J|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 090
pdb|3V5J|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 090
pdb|3V5L|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|C Chain C, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|D Chain D, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V8T|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 477
pdb|3V8T|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 477
pdb|3V8W|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 469
pdb|3V8W|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 469
Length = 266
Score = 62.0 bits (149), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 51/202 (25%), Positives = 85/202 (42%), Gaps = 33/202 (16%)
Query: 44 ISAGTFGFSHLR-------------RQGAF--KSFIAECKALRNIRHRNLIKVLTACLGV 88
I +G FG HL R+GA + FI E + + + H L+++ CL
Sbjct: 15 IGSGQFGLVHLGYWLNKDKVAIKTIREGAMSEEDFIEEAEVMMKLSHPKLVQLYGVCLE- 73
Query: 89 DYQGNDFKALVYEFMHNRSLKEWLYPISKEDETYKRPXXXXXXXXXXIAIDVASALNYLH 148
LV+EFM + L ++L + + +DV + YL
Sbjct: 74 ----QAPICLVFEFMEHGCLSDYLR---------TQRGLFAAETLLGMCLDVCEGMAYLE 120
Query: 149 HDCQPVTAHCVLKPSNVLLDDDMTARVGDFGLARFLPPTRTQTSSIDVKGSIGYIAPEYG 208
C H L N L+ ++ +V DFG+ RF+ + TSS K + + +PE
Sbjct: 121 EAC---VIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQ-YTSSTGTKFPVKWASPEVF 176
Query: 209 VGNEVSTIGDVYSYGILLLELM 230
+ S+ DV+S+G+L+ E+
Sbjct: 177 SFSRYSSKSDVWSFGVLMWEVF 198
>pdb|1SM2|A Chain A, Crystal Structure Of The Phosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SM2|B Chain B, Crystal Structure Of The Phosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNU|A Chain A, Crystal Structure Of The Unphosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNU|B Chain B, Crystal Structure Of The Unphosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNX|A Chain A, Crystal Structure Of Apo Interleukin-2 Tyrosine Kinase
Catalytic Domain
pdb|1SNX|B Chain B, Crystal Structure Of Apo Interleukin-2 Tyrosine Kinase
Catalytic Domain
Length = 264
Score = 62.0 bits (149), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 51/202 (25%), Positives = 85/202 (42%), Gaps = 33/202 (16%)
Query: 44 ISAGTFGFSHLR-------------RQGAF--KSFIAECKALRNIRHRNLIKVLTACLGV 88
I +G FG HL R+GA + FI E + + + H L+++ CL
Sbjct: 13 IGSGQFGLVHLGYWLNKDKVAIKTIREGAMSEEDFIEEAEVMMKLSHPKLVQLYGVCLE- 71
Query: 89 DYQGNDFKALVYEFMHNRSLKEWLYPISKEDETYKRPXXXXXXXXXXIAIDVASALNYLH 148
LV+EFM + L ++L + + +DV + YL
Sbjct: 72 ----QAPICLVFEFMEHGCLSDYLR---------TQRGLFAAETLLGMCLDVCEGMAYLE 118
Query: 149 HDCQPVTAHCVLKPSNVLLDDDMTARVGDFGLARFLPPTRTQTSSIDVKGSIGYIAPEYG 208
C H L N L+ ++ +V DFG+ RF+ + TSS K + + +PE
Sbjct: 119 EAC---VIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQY-TSSTGTKFPVKWASPEVF 174
Query: 209 VGNEVSTIGDVYSYGILLLELM 230
+ S+ DV+S+G+L+ E+
Sbjct: 175 SFSRYSSKSDVWSFGVLMWEVF 196
>pdb|4HCT|A Chain A, Crystal Structure Of Itk In Complex With Compound 52
pdb|4HCU|A Chain A, Crystal Structure Of Itk In Complext With Compound 40
pdb|4HCV|A Chain A, Crystal Structure Of Itk In Complex With Compound 53
Length = 269
Score = 61.6 bits (148), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 51/202 (25%), Positives = 85/202 (42%), Gaps = 33/202 (16%)
Query: 44 ISAGTFGFSHLR-------------RQGAF--KSFIAECKALRNIRHRNLIKVLTACLGV 88
I +G FG HL R+GA + FI E + + + H L+++ CL
Sbjct: 18 IGSGQFGLVHLGYWLNKDKVAIKTIREGAMSEEDFIEEAEVMMKLSHPKLVQLYGVCLE- 76
Query: 89 DYQGNDFKALVYEFMHNRSLKEWLYPISKEDETYKRPXXXXXXXXXXIAIDVASALNYLH 148
LV+EFM + L ++L + + +DV + YL
Sbjct: 77 ----QAPICLVFEFMEHGCLSDYLR---------TQRGLFAAETLLGMCLDVCEGMAYLE 123
Query: 149 HDCQPVTAHCVLKPSNVLLDDDMTARVGDFGLARFLPPTRTQTSSIDVKGSIGYIAPEYG 208
C H L N L+ ++ +V DFG+ RF+ + TSS K + + +PE
Sbjct: 124 EAC---VIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQY-TSSTGTKFPVKWASPEVF 179
Query: 209 VGNEVSTIGDVYSYGILLLELM 230
+ S+ DV+S+G+L+ E+
Sbjct: 180 SFSRYSSKSDVWSFGVLMWEVF 201
>pdb|1YOJ|A Chain A, Crystal Structure Of Src Kinase Domain
pdb|1YOJ|B Chain B, Crystal Structure Of Src Kinase Domain
pdb|1YOM|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Purvalanol A
pdb|1YOM|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Purvalanol A
Length = 283
Score = 61.6 bits (148), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 44/173 (25%), Positives = 79/173 (45%), Gaps = 20/173 (11%)
Query: 61 KSFIAECKALRNIRHRNLIKVLTACLGVDYQGNDFKALVYEFMHNRSLKEWLYPISKEDE 120
++F+ E + ++ +RH L+++ + +V E+M+ SL ++L E
Sbjct: 55 EAFLQEAQVMKKLRHEKLVQLYAVV------SEEPIYIVTEYMNKGSLLDFL---KGETG 105
Query: 121 TYKR-PXXXXXXXXXXIAIDVASALNYLHHDCQPVTAHCVLKPSNVLLDDDMTARVGDFG 179
Y R P + +NY+H D L+ +N+L+ +++ +V DFG
Sbjct: 106 KYLRLPQLVDMSAQIASGMAYVERMNYVHRD---------LRAANILVGENLVCKVADFG 156
Query: 180 LARFLPPTRTQTSSIDVKGSIGYIAPEYGVGNEVSTIGDVYSYGILLLELMIR 232
LAR + T+ K I + APE + + DV+S+GILL EL +
Sbjct: 157 LARLI-EDNEWTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTK 208
>pdb|1YI6|A Chain A, C-Term Tail Segment Of Human Tyrosine Kinase (258-533)
pdb|1YI6|B Chain B, C-Term Tail Segment Of Human Tyrosine Kinase (258-533)
Length = 276
Score = 61.2 bits (147), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 44/173 (25%), Positives = 78/173 (45%), Gaps = 20/173 (11%)
Query: 61 KSFIAECKALRNIRHRNLIKVLTACLGVDYQGNDFKALVYEFMHNRSLKEWLYPISKEDE 120
++F+ E + ++ +RH L+++ + +V E+M SL ++L E
Sbjct: 48 EAFLQEAQVMKKLRHEKLVQLYAVV------SEEPIXIVTEYMSKGSLLDFL---KGETG 98
Query: 121 TYKR-PXXXXXXXXXXIAIDVASALNYLHHDCQPVTAHCVLKPSNVLLDDDMTARVGDFG 179
Y R P + +NY+H D L+ +N+L+ +++ +V DFG
Sbjct: 99 KYLRLPQLVDMAAQIASGMAYVERMNYVHRD---------LRAANILVGENLVCKVADFG 149
Query: 180 LARFLPPTRTQTSSIDVKGSIGYIAPEYGVGNEVSTIGDVYSYGILLLELMIR 232
LAR + T+ K I + APE + + DV+S+GILL EL +
Sbjct: 150 LARLIEDNEX-TARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTK 201
>pdb|3C4C|A Chain A, B-Raf Kinase In Complex With Plx4720
pdb|3C4C|B Chain B, B-Raf Kinase In Complex With Plx4720
Length = 280
Score = 61.2 bits (147), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 53/179 (29%), Positives = 77/179 (43%), Gaps = 21/179 (11%)
Query: 60 FKSFIAECKALRNIRHRNLIKVLTACLGVDYQGNDFKALVYEFMHNRSLKEWLYPISKED 119
++F E LR RH N++ L + Y A+V ++ SL L+ +
Sbjct: 52 LQAFKNEVGVLRKTRHVNIL------LFMGYSTKPQLAIVTQWCEGSSLYHHLHASETKF 105
Query: 120 ETYKRPXXXXXXXXXXIAIDVASALNYLHHDCQPVTAHCVLKPSNVLLDDDMTARVGDFG 179
E K IA A ++YLH H LK +N+ L +D T ++GDFG
Sbjct: 106 EMKK---------LIDIARQTARGMDYLHAKS---IIHRDLKSNNIFLHEDNTVKIGDFG 153
Query: 180 LARFLPPTRTQTSSIDVKGSIGYIAPE---YGVGNEVSTIGDVYSYGILLLELMIREKP 235
LA + GSI ++APE N S DVY++GI+L ELM + P
Sbjct: 154 LATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDSNPYSFQSDVYAFGIVLYELMTGQLP 212
>pdb|1YOL|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Cgp77675
pdb|1YOL|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Cgp77675
Length = 283
Score = 61.2 bits (147), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 44/173 (25%), Positives = 79/173 (45%), Gaps = 20/173 (11%)
Query: 61 KSFIAECKALRNIRHRNLIKVLTACLGVDYQGNDFKALVYEFMHNRSLKEWLYPISKEDE 120
++F+ E + ++ +RH L+++ + +V E+M+ SL ++L E
Sbjct: 55 EAFLQEAQVMKKLRHEKLVQLYAVV------SEEPIYIVTEYMNKGSLLDFL---KGETG 105
Query: 121 TYKR-PXXXXXXXXXXIAIDVASALNYLHHDCQPVTAHCVLKPSNVLLDDDMTARVGDFG 179
Y R P + +NY+H D L+ +N+L+ +++ +V DFG
Sbjct: 106 KYLRLPQLVDMSAQIASGMAYVERMNYVHRD---------LRAANILVGENLVCKVADFG 156
Query: 180 LARFLPPTRTQTSSIDVKGSIGYIAPEYGVGNEVSTIGDVYSYGILLLELMIR 232
LAR + T+ K I + APE + + DV+S+GILL EL +
Sbjct: 157 LARLI-EDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTK 208
>pdb|3OEZ|A Chain A, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain Complexed With Imatinib
pdb|3OEZ|B Chain B, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain Complexed With Imatinib
pdb|3OF0|A Chain A, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain
pdb|3OF0|B Chain B, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain
pdb|3QLF|A Chain A, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Pyrazolopyrimidine
5
pdb|3QLF|B Chain B, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Pyrazolopyrimidine
5
pdb|3QLG|A Chain A, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Dasatinib
pdb|3QLG|B Chain B, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Dasatinib
Length = 286
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 45/173 (26%), Positives = 78/173 (45%), Gaps = 20/173 (11%)
Query: 61 KSFIAECKALRNIRHRNLIKVLTACLGVDYQGNDFKALVYEFMHNRSLKEWLYPISKEDE 120
++F+ E + ++ IRH L+++ + +V E+M SL ++L E
Sbjct: 58 EAFLQEAQVMKKIRHEKLVQLYAVV------SEEPIYIVTEYMSKGSLLDFL---KGEMG 108
Query: 121 TYKR-PXXXXXXXXXXIAIDVASALNYLHHDCQPVTAHCVLKPSNVLLDDDMTARVGDFG 179
Y R P + +NY+H D L+ +N+L+ +++ +V DFG
Sbjct: 109 KYLRLPQLVDMAAQIASGMAYVERMNYVHRD---------LRAANILVGENLVCKVADFG 159
Query: 180 LARFLPPTRTQTSSIDVKGSIGYIAPEYGVGNEVSTIGDVYSYGILLLELMIR 232
LAR + T+ K I + APE + + DV+S+GILL EL +
Sbjct: 160 LARLI-EDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTK 211
>pdb|4FK3|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx3203
pdb|4FK3|B Chain B, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx3203
Length = 292
Score = 60.5 bits (145), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 53/179 (29%), Positives = 77/179 (43%), Gaps = 21/179 (11%)
Query: 60 FKSFIAECKALRNIRHRNLIKVLTACLGVDYQGNDFKALVYEFMHNRSLKEWLYPISKED 119
++F E LR RH N++ L + Y A+V ++ SL L+ +
Sbjct: 64 LQAFKNEVGVLRKTRHVNIL------LFMGYSTKPQLAIVTQWCEGSSLYHHLHASETKF 117
Query: 120 ETYKRPXXXXXXXXXXIAIDVASALNYLHHDCQPVTAHCVLKPSNVLLDDDMTARVGDFG 179
E K IA A ++YLH H LK +N+ L +D T ++GDFG
Sbjct: 118 EMKK---------LIDIARQTARGMDYLHAKS---IIHRDLKSNNIFLHEDNTVKIGDFG 165
Query: 180 LARFLPPTRTQTSSIDVKGSIGYIAPE---YGVGNEVSTIGDVYSYGILLLELMIREKP 235
LA + GSI ++APE N S DVY++GI+L ELM + P
Sbjct: 166 LATEKSRWSGSHQFEQLSGSILWMAPEVIRMQDSNPYSFQSDVYAFGIVLYELMTGQLP 224
>pdb|2BDF|A Chain A, Src Kinase In Complex With Inhibitor Ap23451
pdb|2BDF|B Chain B, Src Kinase In Complex With Inhibitor Ap23451
pdb|2BDJ|A Chain A, Src Kinase In Complex With Inhibitor Ap23464
Length = 279
Score = 60.5 bits (145), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 44/173 (25%), Positives = 78/173 (45%), Gaps = 20/173 (11%)
Query: 61 KSFIAECKALRNIRHRNLIKVLTACLGVDYQGNDFKALVYEFMHNRSLKEWLYPISKEDE 120
++F+ E + ++ +RH L+++ + +V E+M SL ++L E
Sbjct: 51 EAFLQEAQVMKKLRHEKLVQLYAVV------SEEPIYIVTEYMSKGSLLDFL---KGETG 101
Query: 121 TYKR-PXXXXXXXXXXIAIDVASALNYLHHDCQPVTAHCVLKPSNVLLDDDMTARVGDFG 179
Y R P + +NY+H D L+ +N+L+ +++ +V DFG
Sbjct: 102 KYLRLPQLVDMAAQIASGMAYVERMNYVHRD---------LRAANILVGENLVCKVADFG 152
Query: 180 LARFLPPTRTQTSSIDVKGSIGYIAPEYGVGNEVSTIGDVYSYGILLLELMIR 232
LAR + T+ K I + APE + + DV+S+GILL EL +
Sbjct: 153 LARLI-EDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTK 204
>pdb|3DQW|A Chain A, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|B Chain B, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|C Chain C, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|D Chain D, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
Length = 286
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 44/173 (25%), Positives = 78/173 (45%), Gaps = 20/173 (11%)
Query: 61 KSFIAECKALRNIRHRNLIKVLTACLGVDYQGNDFKALVYEFMHNRSLKEWLYPISKEDE 120
++F+ E + ++ +RH L+++ + +V E+M SL ++L E
Sbjct: 58 EAFLQEAQVMKKLRHEKLVQLYAVV------SEEPIYIVIEYMSKGSLLDFL---KGEMG 108
Query: 121 TYKR-PXXXXXXXXXXIAIDVASALNYLHHDCQPVTAHCVLKPSNVLLDDDMTARVGDFG 179
Y R P + +NY+H D L+ +N+L+ +++ +V DFG
Sbjct: 109 KYLRLPQLVDMAAQIASGMAYVERMNYVHRD---------LRAANILVGENLVCKVADFG 159
Query: 180 LARFLPPTRTQTSSIDVKGSIGYIAPEYGVGNEVSTIGDVYSYGILLLELMIR 232
LAR + T+ K I + APE + + DV+S+GILL EL +
Sbjct: 160 LARLIEDNEX-TARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTK 211
>pdb|1Y57|A Chain A, Structure Of Unphosphorylated C-Src In Complex With An
Inhibitor
Length = 452
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 44/173 (25%), Positives = 78/173 (45%), Gaps = 20/173 (11%)
Query: 61 KSFIAECKALRNIRHRNLIKVLTACLGVDYQGNDFKALVYEFMHNRSLKEWLYPISKEDE 120
++F+ E + ++ +RH L+++ + +V E+M SL ++L E
Sbjct: 224 EAFLQEAQVMKKLRHEKLVQLYAVV------SEEPIYIVTEYMSKGSLLDFL---KGETG 274
Query: 121 TYKR-PXXXXXXXXXXIAIDVASALNYLHHDCQPVTAHCVLKPSNVLLDDDMTARVGDFG 179
Y R P + +NY+H D L+ +N+L+ +++ +V DFG
Sbjct: 275 KYLRLPQLVDMAAQIASGMAYVERMNYVHRD---------LRAANILVGENLVCKVADFG 325
Query: 180 LARFLPPTRTQTSSIDVKGSIGYIAPEYGVGNEVSTIGDVYSYGILLLELMIR 232
LAR + T+ K I + APE + + DV+S+GILL EL +
Sbjct: 326 LARLIEDNE-YTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTK 377
>pdb|1FMK|A Chain A, Crystal Structure Of Human Tyrosine-Protein Kinase C-Src
pdb|2SRC|A Chain A, Crystal Structure Of Human Tyrosine-protein Kinase C-src,
In Complex With Amp-pnp
Length = 452
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 44/173 (25%), Positives = 78/173 (45%), Gaps = 20/173 (11%)
Query: 61 KSFIAECKALRNIRHRNLIKVLTACLGVDYQGNDFKALVYEFMHNRSLKEWLYPISKEDE 120
++F+ E + ++ +RH L+++ + +V E+M SL ++L E
Sbjct: 224 EAFLQEAQVMKKLRHEKLVQLYAVV------SEEPIYIVTEYMSKGSLLDFL---KGETG 274
Query: 121 TYKR-PXXXXXXXXXXIAIDVASALNYLHHDCQPVTAHCVLKPSNVLLDDDMTARVGDFG 179
Y R P + +NY+H D L+ +N+L+ +++ +V DFG
Sbjct: 275 KYLRLPQLVDMAAQIASGMAYVERMNYVHRD---------LRAANILVGENLVCKVADFG 325
Query: 180 LARFLPPTRTQTSSIDVKGSIGYIAPEYGVGNEVSTIGDVYSYGILLLELMIR 232
LAR + T+ K I + APE + + DV+S+GILL EL +
Sbjct: 326 LARLIEDNE-YTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTK 377
>pdb|2DQ7|X Chain X, Crystal Structure Of Fyn Kinase Domain Complexed With
Staurosporine
Length = 283
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 42/172 (24%), Positives = 78/172 (45%), Gaps = 18/172 (10%)
Query: 61 KSFIAECKALRNIRHRNLIKVLTACLGVDYQGNDFKALVYEFMHNRSLKEWLYPISKEDE 120
+SF+ E + ++ ++H L+++ + +V E+M+ SL ++L E
Sbjct: 49 ESFLEEAQIMKKLKHDKLVQLYAVV------SEEPIYIVTEYMNKGSLLDFLK--DGEGR 100
Query: 121 TYKRPXXXXXXXXXXIAIDVASALNYLHHDCQPVTAHCVLKPSNVLLDDDMTARVGDFGL 180
K P + +NY+H D L+ +N+L+ + + ++ DFGL
Sbjct: 101 ALKLPNLVDMAAQVAAGMAYIERMNYIHRD---------LRSANILVGNGLICKIADFGL 151
Query: 181 ARFLPPTRTQTSSIDVKGSIGYIAPEYGVGNEVSTIGDVYSYGILLLELMIR 232
AR + T+ K I + APE + + DV+S+GILL EL+ +
Sbjct: 152 ARLIEDNEX-TARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELVTK 202
>pdb|3OG7|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx4032
pdb|3OG7|B Chain B, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx4032
Length = 289
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 53/179 (29%), Positives = 77/179 (43%), Gaps = 21/179 (11%)
Query: 60 FKSFIAECKALRNIRHRNLIKVLTACLGVDYQGNDFKALVYEFMHNRSLKEWLYPISKED 119
++F E LR RH N++ L + Y A+V ++ SL L+ +
Sbjct: 64 LQAFKNEVGVLRKTRHVNIL------LFMGYSTAPQLAIVTQWCEGSSLYHHLHASETKF 117
Query: 120 ETYKRPXXXXXXXXXXIAIDVASALNYLHHDCQPVTAHCVLKPSNVLLDDDMTARVGDFG 179
E K IA A ++YLH H LK +N+ L +D T ++GDFG
Sbjct: 118 EMKK---------LIDIARQTARGMDYLHAKS---IIHRDLKSNNIFLHEDNTVKIGDFG 165
Query: 180 LARFLPPTRTQTSSIDVKGSIGYIAPE---YGVGNEVSTIGDVYSYGILLLELMIREKP 235
LA + GSI ++APE N S DVY++GI+L ELM + P
Sbjct: 166 LATEKSRWSGSHQFEQLSGSILWMAPEVIRMQDSNPYSFQSDVYAFGIVLYELMTGQLP 224
>pdb|3D7U|A Chain A, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3D7U|C Chain C, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 263
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 50/177 (28%), Positives = 84/177 (47%), Gaps = 22/177 (12%)
Query: 54 LRRQGAFKSFIAECKALRNIRHRNLIKVLTACLGVDYQGNDFKALVYEFMHNRSLKEWLY 113
++ ++F+AE + +RH NL+++L V+ +G + +V E+M SL ++L
Sbjct: 37 IKNDATAQAFLAEASVMTQLRHSNLVQLLGVI--VEEKGGLY--IVTEYMAKGSLVDYLR 92
Query: 114 PISKEDETYKRPXXXXXXXXXXIAIDVASALNYLHHDCQPVTAHCVLKPSNVLLDDDMTA 173
+ ++DV A+ YL + H L NVL+ +D A
Sbjct: 93 SRGRS--------VLGGDCLLKFSLDVCEAMEYLEGNN---FVHRDLAARNVLVSEDNVA 141
Query: 174 RVGDFGLARFLPPTRTQTSSIDV-KGSIGYIAPEYGVGNEVSTIGDVYSYGILLLEL 229
+V DFGL T+ +S+ D K + + APE + ST DV+S+GILL E+
Sbjct: 142 KVSDFGL------TKEASSTQDTGKLPVKWTAPEALREKKFSTKSDVWSFGILLWEI 192
>pdb|3G6H|A Chain A, Src Thr338ile Inhibited In The Dfg-Asp-Out Conformation
pdb|3G6H|B Chain B, Src Thr338ile Inhibited In The Dfg-Asp-Out Conformation
Length = 286
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 44/173 (25%), Positives = 78/173 (45%), Gaps = 20/173 (11%)
Query: 61 KSFIAECKALRNIRHRNLIKVLTACLGVDYQGNDFKALVYEFMHNRSLKEWLYPISKEDE 120
++F+ E + ++ +RH L+++ + +V E+M SL ++L E
Sbjct: 58 EAFLQEAQVMKKLRHEKLVQLYAVV------SEEPIYIVIEYMSKGSLLDFL---KGEMG 108
Query: 121 TYKR-PXXXXXXXXXXIAIDVASALNYLHHDCQPVTAHCVLKPSNVLLDDDMTARVGDFG 179
Y R P + +NY+H D L+ +N+L+ +++ +V DFG
Sbjct: 109 KYLRLPQLVDMAAQIASGMAYVERMNYVHRD---------LRAANILVGENLVCKVADFG 159
Query: 180 LARFLPPTRTQTSSIDVKGSIGYIAPEYGVGNEVSTIGDVYSYGILLLELMIR 232
LAR + T+ K I + APE + + DV+S+GILL EL +
Sbjct: 160 LARLI-EDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTK 211
>pdb|2HK5|A Chain A, Hck Kinase In Complex With Lck Targetted Inhibitor Pg-
1009247
Length = 270
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 47/172 (27%), Positives = 80/172 (46%), Gaps = 22/172 (12%)
Query: 61 KSFIAECKALRNIRHRNLIKVLTACLGVDYQGNDFKALVYEFMHNRSLKEWLYPISKEDE 120
++F+AE ++ ++H L+K+ + ++ EFM SL ++L K DE
Sbjct: 55 EAFLAEANVMKTLQHDKLVKLHAVVT------KEPIYIITEFMAKGSLLDFL----KSDE 104
Query: 121 TYKRPXXXXXXXXXXIAIDVA--SALNYLHHDCQPVTAHCVLKPSNVLLDDDMTARVGDF 178
K+P IA +A NY+H D L+ +N+L+ + ++ DF
Sbjct: 105 GSKQPLPKLIDFSAQIAEGMAFIEQRNYIHRD---------LRAANILVSASLVCKIADF 155
Query: 179 GLARFLPPTRTQTSSIDVKGSIGYIAPEYGVGNEVSTIGDVYSYGILLLELM 230
GLAR + T+ K I + APE + DV+S+GILL+E++
Sbjct: 156 GLARVI-EDNEYTAREGAKFPIKWTAPEAINFGSFTIKSDVWSFGILLMEIV 206
>pdb|1BYG|A Chain A, Kinase Domain Of Human C-Terminal Src Kinase (Csk) In
Complex With Inhibitor Staurosporine
Length = 278
Score = 59.7 bits (143), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 50/176 (28%), Positives = 83/176 (47%), Gaps = 20/176 (11%)
Query: 54 LRRQGAFKSFIAECKALRNIRHRNLIKVLTACLGVDYQGNDFKALVYEFMHNRSLKEWLY 113
++ ++F+AE + +RH NL+++L V+ +G + +V E+M SL ++L
Sbjct: 52 IKNDATAQAFLAEASVMTQLRHSNLVQLLGVI--VEEKGGLY--IVTEYMAKGSLVDYLR 107
Query: 114 PISKEDETYKRPXXXXXXXXXXIAIDVASALNYLHHDCQPVTAHCVLKPSNVLLDDDMTA 173
+ ++DV A+ YL + H L NVL+ +D A
Sbjct: 108 SRGRS--------VLGGDCLLKFSLDVCEAMEYLEGNN---FVHRDLAARNVLVSEDNVA 156
Query: 174 RVGDFGLARFLPPTRTQTSSIDVKGSIGYIAPEYGVGNEVSTIGDVYSYGILLLEL 229
+V DFGL + T+ T + VK + APE + ST DV+S+GILL E+
Sbjct: 157 KVSDFGLTKEASSTQ-DTGKLPVK----WTAPEALREKKFSTKSDVWSFGILLWEI 207
>pdb|2OIQ|A Chain A, Crystal Structure Of Chicken C-Src Kinase Domain In
Complex With The Cancer Drug Imatinib.
pdb|2OIQ|B Chain B, Crystal Structure Of Chicken C-Src Kinase Domain In
Complex With The Cancer Drug Imatinib.
pdb|3D7T|B Chain B, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3DQX|A Chain A, Chicken C-Src Kinase Domain In Complex With Atpgs
pdb|3DQX|B Chain B, Chicken C-Src Kinase Domain In Complex With Atpgs
pdb|3EN4|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp121, A Multitargeted
Kinase Inhibitor
pdb|3EN4|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp121, A Multitargeted
Kinase Inhibitor
pdb|3EN5|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp494, A Multitargeted
Kinase Inhibitor
pdb|3EN5|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp494, A Multitargeted
Kinase Inhibitor
pdb|3EN6|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp102, A Multitargeted
Kinase Inhibitor
pdb|3EN6|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp102, A Multitargeted
Kinase Inhibitor
pdb|3EN7|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With S1, A Multitargeted Kinase
Inhibitor
pdb|3EN7|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With S1, A Multitargeted Kinase
Inhibitor
pdb|3EL7|A Chain A, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 3
pdb|3EL8|A Chain A, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 5
pdb|3EL8|B Chain B, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 5
pdb|3F6X|A Chain A, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|B Chain B, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|C Chain C, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|D Chain D, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3G6G|A Chain A, Equally Potent Inhibition Of C-Src And Abl By Compounds
That Recognize Inactive Kinase Conformations
pdb|3G6G|B Chain B, Equally Potent Inhibition Of C-Src And Abl By Compounds
That Recognize Inactive Kinase Conformations
pdb|4AGW|A Chain A, Discovery Of A Small Molecule Type Ii Inhibitor Of Wild-
Type And Gatekeeper Mutants Of Bcr-Abl, Pdgfralpha, Kit,
And Src Kinases
pdb|4AGW|B Chain B, Discovery Of A Small Molecule Type Ii Inhibitor Of Wild-
Type And Gatekeeper Mutants Of Bcr-Abl, Pdgfralpha, Kit,
And Src Kinases
pdb|3UQF|A Chain A, C-Src Kinase Domain In Complex With Bki Rm-1-89
pdb|3UQF|B Chain B, C-Src Kinase Domain In Complex With Bki Rm-1-89
pdb|3UQG|A Chain A, C-Src Kinase Domain In Complex With Bumpless Bki Analog
Uw1243
pdb|3UQG|B Chain B, C-Src Kinase Domain In Complex With Bumpless Bki Analog
Uw1243
pdb|4DGG|A Chain A, C-Src Kinase Domain In Complex With Rm-1-176
pdb|4DGG|B Chain B, C-Src Kinase Domain In Complex With Rm-1-176
Length = 286
Score = 59.7 bits (143), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 44/173 (25%), Positives = 78/173 (45%), Gaps = 20/173 (11%)
Query: 61 KSFIAECKALRNIRHRNLIKVLTACLGVDYQGNDFKALVYEFMHNRSLKEWLYPISKEDE 120
++F+ E + ++ +RH L+++ + +V E+M SL ++L E
Sbjct: 58 EAFLQEAQVMKKLRHEKLVQLYAVV------SEEPIYIVTEYMSKGSLLDFL---KGEMG 108
Query: 121 TYKR-PXXXXXXXXXXIAIDVASALNYLHHDCQPVTAHCVLKPSNVLLDDDMTARVGDFG 179
Y R P + +NY+H D L+ +N+L+ +++ +V DFG
Sbjct: 109 KYLRLPQLVDMAAQIASGMAYVERMNYVHRD---------LRAANILVGENLVCKVADFG 159
Query: 180 LARFLPPTRTQTSSIDVKGSIGYIAPEYGVGNEVSTIGDVYSYGILLLELMIR 232
LAR + T+ K I + APE + + DV+S+GILL EL +
Sbjct: 160 LARLI-EDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTK 211
>pdb|3U4W|A Chain A, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc4b
pdb|3U51|A Chain A, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc1
pdb|3U51|B Chain B, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc1
Length = 275
Score = 59.7 bits (143), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 44/173 (25%), Positives = 78/173 (45%), Gaps = 20/173 (11%)
Query: 61 KSFIAECKALRNIRHRNLIKVLTACLGVDYQGNDFKALVYEFMHNRSLKEWLYPISKEDE 120
++F+ E + ++ +RH L+++ + +V E+M SL ++L E
Sbjct: 47 EAFLQEAQVMKKLRHEKLVQLYAVV------SEEPIYIVTEYMSKGSLLDFL---KGEMG 97
Query: 121 TYKR-PXXXXXXXXXXIAIDVASALNYLHHDCQPVTAHCVLKPSNVLLDDDMTARVGDFG 179
Y R P + +NY+H D L+ +N+L+ +++ +V DFG
Sbjct: 98 KYLRLPQLVDMAAQIASGMAYVERMNYVHRD---------LRAANILVGENLVCKVADFG 148
Query: 180 LARFLPPTRTQTSSIDVKGSIGYIAPEYGVGNEVSTIGDVYSYGILLLELMIR 232
LAR + T+ K I + APE + + DV+S+GILL EL +
Sbjct: 149 LARLI-EDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTK 200
>pdb|1KSW|A Chain A, Structure Of Human C-Src Tyrosine Kinase (Thr338gly
Mutant) In Complex With N6-Benzyl Adp
Length = 452
Score = 59.7 bits (143), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 44/173 (25%), Positives = 78/173 (45%), Gaps = 20/173 (11%)
Query: 61 KSFIAECKALRNIRHRNLIKVLTACLGVDYQGNDFKALVYEFMHNRSLKEWLYPISKEDE 120
++F+ E + ++ +RH L+++ + +V E+M SL ++L E
Sbjct: 224 EAFLQEAQVMKKLRHEKLVQLYAVV------SEEPIYIVGEYMSKGSLLDFL---KGETG 274
Query: 121 TYKR-PXXXXXXXXXXIAIDVASALNYLHHDCQPVTAHCVLKPSNVLLDDDMTARVGDFG 179
Y R P + +NY+H D L+ +N+L+ +++ +V DFG
Sbjct: 275 KYLRLPQLVDMAAQIASGMAYVERMNYVHRD---------LRAANILVGENLVCKVADFG 325
Query: 180 LARFLPPTRTQTSSIDVKGSIGYIAPEYGVGNEVSTIGDVYSYGILLLELMIR 232
LAR + T+ K I + APE + + DV+S+GILL EL +
Sbjct: 326 LARLIEDNE-YTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTK 377
>pdb|3T9T|A Chain A, Crystal Structure Of Btk Mutant (F435t,K596r) Complexed
With Imidazo[1,5-A]quinoxaline
Length = 267
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 51/202 (25%), Positives = 84/202 (41%), Gaps = 33/202 (16%)
Query: 44 ISAGTFGFSHLR-------------RQGAF--KSFIAECKALRNIRHRNLIKVLTACLGV 88
I +G FG HL R+GA + FI E + + + H L+++ CL
Sbjct: 16 IGSGQFGLVHLGYWLNKDKVAIKTIREGAMSEEDFIEEAEVMMKLSHPKLVQLYGVCLE- 74
Query: 89 DYQGNDFKALVYEFMHNRSLKEWLYPISKEDETYKRPXXXXXXXXXXIAIDVASALNYLH 148
LV EFM + L ++L + + +DV + YL
Sbjct: 75 ----QAPICLVTEFMEHGCLSDYLR---------TQRGLFAAETLLGMCLDVCEGMAYLE 121
Query: 149 HDCQPVTAHCVLKPSNVLLDDDMTARVGDFGLARFLPPTRTQTSSIDVKGSIGYIAPEYG 208
C H L N L+ ++ +V DFG+ RF+ + TSS K + + +PE
Sbjct: 122 EAC---VIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQ-YTSSTGTKFPVKWASPEVF 177
Query: 209 VGNEVSTIGDVYSYGILLLELM 230
+ S+ DV+S+G+L+ E+
Sbjct: 178 SFSRYSSKSDVWSFGVLMWEVF 199
>pdb|3D7U|B Chain B, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3D7U|D Chain D, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 277
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 44/173 (25%), Positives = 78/173 (45%), Gaps = 20/173 (11%)
Query: 61 KSFIAECKALRNIRHRNLIKVLTACLGVDYQGNDFKALVYEFMHNRSLKEWLYPISKEDE 120
++F+ E + ++ +RH L+++ + +V E+M SL ++L E
Sbjct: 49 EAFLQEAQVMKKLRHEKLVQLYAVV------SEEPIYIVTEYMSKGSLLDFL---KGEMG 99
Query: 121 TYKR-PXXXXXXXXXXIAIDVASALNYLHHDCQPVTAHCVLKPSNVLLDDDMTARVGDFG 179
Y R P + +NY+H D L+ +N+L+ +++ +V DFG
Sbjct: 100 KYLRLPQLVDMAAQIASGMAYVERMNYVHRD---------LRAANILVGENLVCKVADFG 150
Query: 180 LARFLPPTRTQTSSIDVKGSIGYIAPEYGVGNEVSTIGDVYSYGILLLELMIR 232
LAR + T+ K I + APE + + DV+S+GILL EL +
Sbjct: 151 LARLI-EDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTK 202
>pdb|1QCF|A Chain A, Crystal Structure Of Hck In Complex With A Src Family-
Selective Tyrosine Kinase Inhibitor
pdb|2C0I|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-420983
pdb|2C0I|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-420983
pdb|2C0O|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-770041
pdb|2C0O|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-770041
pdb|2C0T|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-641359
pdb|2C0T|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-641359
Length = 454
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 47/174 (27%), Positives = 81/174 (46%), Gaps = 22/174 (12%)
Query: 59 AFKSFIAECKALRNIRHRNLIKVLTACLGVDYQGNDFKALVYEFMHNRSLKEWLYPISKE 118
+ ++F+AE ++ ++H L+K+ + ++ EFM SL ++L K
Sbjct: 226 SVEAFLAEANVMKTLQHDKLVKLHAVVT------KEPIYIITEFMAKGSLLDFL----KS 275
Query: 119 DETYKRPXXXXXXXXXXIAIDVA--SALNYLHHDCQPVTAHCVLKPSNVLLDDDMTARVG 176
DE K+P IA +A NY+H D L+ +N+L+ + ++
Sbjct: 276 DEGSKQPLPKLIDFSAQIAEGMAFIEQRNYIHRD---------LRAANILVSASLVCKIA 326
Query: 177 DFGLARFLPPTRTQTSSIDVKGSIGYIAPEYGVGNEVSTIGDVYSYGILLLELM 230
DFGLAR + T+ K I + APE + DV+S+GILL+E++
Sbjct: 327 DFGLARVIEDNE-YTAREGAKFPIKWTAPEAINFGSFTIKSDVWSFGILLMEIV 379
>pdb|3SVV|A Chain A, Crystal Structure Of T338c C-Src Covalently Bound To
Vinylsulfonamide- Pyrazolopyrimidine 9
pdb|3SVV|B Chain B, Crystal Structure Of T338c C-Src Covalently Bound To
Vinylsulfonamide- Pyrazolopyrimidine 9
Length = 286
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 44/173 (25%), Positives = 78/173 (45%), Gaps = 20/173 (11%)
Query: 61 KSFIAECKALRNIRHRNLIKVLTACLGVDYQGNDFKALVYEFMHNRSLKEWLYPISKEDE 120
++F+ E + ++ +RH L+++ + +V E+M SL ++L E
Sbjct: 58 EAFLQEAQVMKKLRHEKLVQLYAVV------SEEPIYIVCEYMSKGSLLDFL---KGEMG 108
Query: 121 TYKR-PXXXXXXXXXXIAIDVASALNYLHHDCQPVTAHCVLKPSNVLLDDDMTARVGDFG 179
Y R P + +NY+H D L+ +N+L+ +++ +V DFG
Sbjct: 109 KYLRLPQLVDMAAQIASGMAYVERMNYVHRD---------LRAANILVGENLVCKVADFG 159
Query: 180 LARFLPPTRTQTSSIDVKGSIGYIAPEYGVGNEVSTIGDVYSYGILLLELMIR 232
LAR + T+ K I + APE + + DV+S+GILL EL +
Sbjct: 160 LARLI-EDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTK 211
>pdb|2H8H|A Chain A, Src Kinase In Complex With A Quinazoline Inhibitor
Length = 535
Score = 59.3 bits (142), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 44/173 (25%), Positives = 78/173 (45%), Gaps = 20/173 (11%)
Query: 61 KSFIAECKALRNIRHRNLIKVLTACLGVDYQGNDFKALVYEFMHNRSLKEWLYPISKEDE 120
++F+ E + ++ +RH L+++ + +V E+M SL ++L E
Sbjct: 307 EAFLQEAQVMKKLRHEKLVQLYAVV------SEEPIYIVTEYMSKGSLLDFL---KGETG 357
Query: 121 TYKR-PXXXXXXXXXXIAIDVASALNYLHHDCQPVTAHCVLKPSNVLLDDDMTARVGDFG 179
Y R P + +NY+H D L+ +N+L+ +++ +V DFG
Sbjct: 358 KYLRLPQLVDMAAQIASGMAYVERMNYVHRD---------LRAANILVGENLVCKVADFG 408
Query: 180 LARFLPPTRTQTSSIDVKGSIGYIAPEYGVGNEVSTIGDVYSYGILLLELMIR 232
LAR + T+ K I + APE + + DV+S+GILL EL +
Sbjct: 409 LARLI-EDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTK 460
>pdb|1JPA|A Chain A, Crystal Structure Of Unphosphorylated Ephb2 Receptor
Tyrosine Kinase And Juxtamembrane Region
pdb|1JPA|B Chain B, Crystal Structure Of Unphosphorylated Ephb2 Receptor
Tyrosine Kinase And Juxtamembrane Region
Length = 312
Score = 59.3 bits (142), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 58/217 (26%), Positives = 92/217 (42%), Gaps = 47/217 (21%)
Query: 41 ENLISAGTFG---FSHLRRQG------AFKS------------FIAECKALRNIRHRNLI 79
E +I AG FG HL+ G A K+ F++E + H N+I
Sbjct: 38 EQVIGAGEFGEVCSGHLKLPGKREIFVAIKTLKSGYTEKQRRDFLSEASIMGQFDHPNVI 97
Query: 80 K---VLTACLGVDYQGNDFKALVYEFMHNRSLKEWLYPISKEDETYKRPXXXXXXXXXXI 136
V+T V ++ EFM N SL +L + D +
Sbjct: 98 HLEGVVTKSTPV--------MIITEFMENGSLDSFL---RQNDGQFTVIQLVGMLRGIAA 146
Query: 137 AIDVASALNYLHHDCQPVTAHCVLKPSNVLLDDDMTARVGDFGLARFL---PPTRTQTSS 193
+ + +NY+H D L N+L++ ++ +V DFGL+RFL T TS+
Sbjct: 147 GMKYLADMNYVHRD---------LAARNILVNSNLVCKVSDFGLSRFLEDDTSDPTYTSA 197
Query: 194 IDVKGSIGYIAPEYGVGNEVSTIGDVYSYGILLLELM 230
+ K I + APE + ++ DV+SYGI++ E+M
Sbjct: 198 LGGKIPIRWTAPEAIQYRKFTSASDVWSYGIVMWEVM 234
>pdb|3QC4|A Chain A, Pdk1 In Complex With Dfg-Out Inhibitor Xxx
pdb|3QC4|B Chain B, Pdk1 In Complex With Dfg-Out Inhibitor Xxx
Length = 314
Score = 59.3 bits (142), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 45/176 (25%), Positives = 77/176 (43%), Gaps = 18/176 (10%)
Query: 102 FMHNRSLKEWLYPISKEDETYKRPXXXXXXXXXXIAIDVASALNYLHHDCQPVTAHCVLK 161
+ N L +++ I DET R ++ SAL YLH H LK
Sbjct: 116 YAKNGELLKYIRKIGSFDETCTR----------FYTAEIVSALEYLHGKG---IIHRDLK 162
Query: 162 PSNVLLDDDMTARVGDFGLARFLPPTRTQTSSIDVKGSIGYIAPEYGVGNEVSTIGDVYS 221
P N+LL++DM ++ DFG A+ L P Q + G+ Y++PE D+++
Sbjct: 163 PENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSACKSSDLWA 222
Query: 222 YGILLLELM-----IREKPSDIMFEGDMNLHKFAKMALSNHVKDIVDSILLNDDEK 272
G ++ +L+ R ++F+ + L A +D+V+ +L+ D K
Sbjct: 223 LGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYDFPAAFFPKARDLVEKLLVLDATK 278
>pdb|3PWY|A Chain A, Crystal Structure Of An Extender (Spd28345)-Modified Human
Pdk1 Complex 2
Length = 311
Score = 59.3 bits (142), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 38/139 (27%), Positives = 66/139 (47%), Gaps = 8/139 (5%)
Query: 139 DVASALNYLHHDCQPVTAHCVLKPSNVLLDDDMTARVGDFGLARFLPPTRTQTSSIDVKG 198
++ SAL YLH H LKP N+LL++DM ++ DFG A+ L P Q + G
Sbjct: 140 EIVSALEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANSFVG 196
Query: 199 SIGYIAPEYGVGNEVSTIGDVYSYGILLLELM-----IREKPSDIMFEGDMNLHKFAKMA 253
+ Y++PE S D+++ G ++ +L+ R ++F+ + L
Sbjct: 197 TAQYVSPELLTEKSASKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYDFPEK 256
Query: 254 LSNHVKDIVDSILLNDDEK 272
+D+V+ +L+ D K
Sbjct: 257 FFPKARDLVEKLLVLDATK 275
>pdb|1K9A|A Chain A, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|B Chain B, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|C Chain C, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|D Chain D, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|E Chain E, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|F Chain F, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
Length = 450
Score = 59.3 bits (142), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 50/177 (28%), Positives = 84/177 (47%), Gaps = 22/177 (12%)
Query: 54 LRRQGAFKSFIAECKALRNIRHRNLIKVLTACLGVDYQGNDFKALVYEFMHNRSLKEWLY 113
++ ++F+AE + +RH NL+++L V+ +G + +V E+M SL ++L
Sbjct: 224 IKNDATAQAFLAEASVMTQLRHSNLVQLLGVI--VEEKGGLY--IVTEYMAKGSLVDYLR 279
Query: 114 PISKEDETYKRPXXXXXXXXXXIAIDVASALNYLHHDCQPVTAHCVLKPSNVLLDDDMTA 173
+ ++DV A+ YL + H L NVL+ +D A
Sbjct: 280 SRGRS--------VLGGDCLLKFSLDVCEAMEYLEGNN---FVHRDLAARNVLVSEDNVA 328
Query: 174 RVGDFGLARFLPPTRTQTSSIDV-KGSIGYIAPEYGVGNEVSTIGDVYSYGILLLEL 229
+V DFGL T+ +S+ D K + + APE + ST DV+S+GILL E+
Sbjct: 329 KVSDFGL------TKEASSTQDTGKLPVKWTAPEALREKKFSTKSDVWSFGILLWEI 379
>pdb|3QGW|A Chain A, Crystal Structure Of Itk Kinase Bound To An Inhibitor
pdb|3QGW|B Chain B, Crystal Structure Of Itk Kinase Bound To An Inhibitor
pdb|3QGY|A Chain A, Crystal Structure Of Itk Inhibitor Complex
pdb|3QGY|B Chain B, Crystal Structure Of Itk Inhibitor Complex
Length = 286
Score = 58.9 bits (141), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 49/202 (24%), Positives = 84/202 (41%), Gaps = 33/202 (16%)
Query: 44 ISAGTFGFSHLR-------------RQGAFKS--FIAECKALRNIRHRNLIKVLTACLGV 88
I +G FG HL ++G+ FI E + + + H L+++ CL
Sbjct: 35 IGSGQFGLVHLGYWLNKDKVAIKTIKEGSMSEDDFIEEAEVMMKLSHPKLVQLYGVCLE- 93
Query: 89 DYQGNDFKALVYEFMHNRSLKEWLYPISKEDETYKRPXXXXXXXXXXIAIDVASALNYLH 148
LV+EFM + L ++L + + +DV + YL
Sbjct: 94 ----QAPICLVFEFMEHGCLSDYLR---------TQRGLFAAETLLGMCLDVCEGMAYLE 140
Query: 149 HDCQPVTAHCVLKPSNVLLDDDMTARVGDFGLARFLPPTRTQTSSIDVKGSIGYIAPEYG 208
C H L N L+ ++ +V DFG+ RF+ + TSS K + + +PE
Sbjct: 141 EAC---VIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQ-YTSSTGTKFPVKWASPEVF 196
Query: 209 VGNEVSTIGDVYSYGILLLELM 230
+ S+ DV+S+G+L+ E+
Sbjct: 197 SFSRYSSKSDVWSFGVLMWEVF 218
>pdb|2VWU|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWV|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWW|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWX|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWY|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWZ|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VX0|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VX1|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2X9F|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2XVD|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|4BB4|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
Length = 302
Score = 58.9 bits (141), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 51/203 (25%), Positives = 92/203 (45%), Gaps = 29/203 (14%)
Query: 40 EENLISAGTFGFSHLRRQGAFKSFIAECKALRNIRHRNLIK---VLTACLGVDYQGNDFK 96
+E+ ++ T + RQ + F++E + H N+I+ V+T + V
Sbjct: 43 KESCVAIKTLKGGYTERQR--REFLSEASIMGQFEHPNIIRLEGVVTNSMPV-------- 92
Query: 97 ALVYEFMHNRSLKEWLYPISKEDETYKRPXXXXXXXXXXIAIDVASALNYLHHDCQPVTA 156
++ EFM N +L +L D + + + ++Y+H D
Sbjct: 93 MILTEFMENGALDSFL---RLNDGQFTVIQLVGMLRGIASGMRYLAEMSYVHRD------ 143
Query: 157 HCVLKPSNVLLDDDMTARVGDFGLARFLPPTR---TQTSSIDVKGSIGYIAPEYGVGNEV 213
L N+L++ ++ +V DFGL+RFL T+TSS+ K I + APE +
Sbjct: 144 ---LAARNILVNSNLVCKVSDFGLSRFLEENSSDPTETSSLGGKIPIRWTAPEAIAFRKF 200
Query: 214 STIGDVYSYGILLLELM-IREKP 235
++ D +SYGI++ E+M E+P
Sbjct: 201 TSASDAWSYGIVMWEVMSFGERP 223
>pdb|3GEQ|A Chain A, Structural Basis For The Chemical Rescue Of Src Kinase
Activity
pdb|3GEQ|B Chain B, Structural Basis For The Chemical Rescue Of Src Kinase
Activity
Length = 286
Score = 58.5 bits (140), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 44/173 (25%), Positives = 77/173 (44%), Gaps = 20/173 (11%)
Query: 61 KSFIAECKALRNIRHRNLIKVLTACLGVDYQGNDFKALVYEFMHNRSLKEWLYPISKEDE 120
++F+ E + ++ +RH L+++ + +V E+M SL ++L E
Sbjct: 58 EAFLQEAQVMKKLRHEKLVQLYAVV------SEEPIYIVTEYMSKGSLLDFL---KGEMG 108
Query: 121 TYKR-PXXXXXXXXXXIAIDVASALNYLHHDCQPVTAHCVLKPSNVLLDDDMTARVGDFG 179
Y R P + +NY+H D L +N+L+ +++ +V DFG
Sbjct: 109 KYLRLPQLVDMAAQIASGMAYVERMNYVHRD---------LAAANILVGENLVCKVADFG 159
Query: 180 LARFLPPTRTQTSSIDVKGSIGYIAPEYGVGNEVSTIGDVYSYGILLLELMIR 232
LAR + T+ K I + APE + + DV+S+GILL EL +
Sbjct: 160 LARLI-EDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTK 211
>pdb|4E4L|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|E Chain E, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|D Chain D, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4N|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 49
pdb|4E4N|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 49
pdb|4E5W|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 26
pdb|4E5W|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 26
pdb|4EHZ|A Chain A, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|B Chain B, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|C Chain C, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|D Chain D, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EI4|A Chain A, Jak1 Kinase (jh1 Domain) In Complex With Compound 20
pdb|4EI4|B Chain B, Jak1 Kinase (jh1 Domain) In Complex With Compound 20
pdb|4FK6|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 72
pdb|4FK6|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 72
Length = 302
Score = 58.5 bits (140), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 47/166 (28%), Positives = 80/166 (48%), Gaps = 16/166 (9%)
Query: 66 ECKALRNIRHRNLIKVLTACLGVDYQGNDFKALVYEFMHNRSLKEWLYPISKEDETYKRP 125
E + LRN+ H N++K C + GN K L+ EF+ + SLKE+L P +K K+
Sbjct: 73 EIEILRNLYHENIVKYKGIC--TEDGGNGIK-LIMEFLPSGSLKEYL-PKNKNKINLKQQ 128
Query: 126 XXXXXXXXXXIAIDVASALNYLHHDCQPVTAHCVLKPSNVLLDDDMTARVGDFGLARFLP 185
+D + Y+H D L NVL++ + ++GDFGL + +
Sbjct: 129 LKYAVQICK--GMDYLGSRQYVHRD---------LAARNVLVESEHQVKIGDFGLTKAIE 177
Query: 186 PTRTQTSSIDVKGS-IGYIAPEYGVGNEVSTIGDVYSYGILLLELM 230
+ + D + S + + APE + ++ DV+S+G+ L EL+
Sbjct: 178 TDKEXXTVKDDRDSPVFWYAPECLMQSKFYIASDVWSFGVTLHELL 223
>pdb|3EYG|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
pdb|3EYH|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
Length = 290
Score = 58.5 bits (140), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 47/166 (28%), Positives = 80/166 (48%), Gaps = 16/166 (9%)
Query: 66 ECKALRNIRHRNLIKVLTACLGVDYQGNDFKALVYEFMHNRSLKEWLYPISKEDETYKRP 125
E + LRN+ H N++K C + GN K L+ EF+ + SLKE+L P +K K+
Sbjct: 61 EIEILRNLYHENIVKYKGIC--TEDGGNGIK-LIMEFLPSGSLKEYL-PKNKNKINLKQQ 116
Query: 126 XXXXXXXXXXIAIDVASALNYLHHDCQPVTAHCVLKPSNVLLDDDMTARVGDFGLARFLP 185
+D + Y+H D L NVL++ + ++GDFGL + +
Sbjct: 117 LKYAVQICK--GMDYLGSRQYVHRD---------LAARNVLVESEHQVKIGDFGLTKAIE 165
Query: 186 PTRTQTSSIDVKGS-IGYIAPEYGVGNEVSTIGDVYSYGILLLELM 230
+ + D + S + + APE + ++ DV+S+G+ L EL+
Sbjct: 166 TDKEXXTVKDDRDSPVFWYAPECLMQSKFYIASDVWSFGVTLHELL 211
>pdb|3D7T|A Chain A, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 269
Score = 58.5 bits (140), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 50/177 (28%), Positives = 83/177 (46%), Gaps = 22/177 (12%)
Query: 54 LRRQGAFKSFIAECKALRNIRHRNLIKVLTACLGVDYQGNDFKALVYEFMHNRSLKEWLY 113
++ ++F+AE + +RH NL+++L V+ +G + +V E+M SL ++L
Sbjct: 43 IKNDATAQAFLAEASVMTQLRHSNLVQLLGVI--VEEKGGLY--IVTEYMAKGSLVDYLR 98
Query: 114 PISKEDETYKRPXXXXXXXXXXIAIDVASALNYLHHDCQPVTAHCVLKPSNVLLDDDMTA 173
+ ++DV A+ YL + H L NVL+ +D A
Sbjct: 99 SRGRS--------VLGGDCLLKFSLDVCEAMEYLEGNN---FVHRDLAARNVLVSEDNVA 147
Query: 174 RVGDFGLARFLPPTRTQTSSIDV-KGSIGYIAPEYGVGNEVSTIGDVYSYGILLLEL 229
+V DFGL T+ +S+ D K + + APE ST DV+S+GILL E+
Sbjct: 148 KVSDFGL------TKEASSTQDTGKLPVKWTAPEALREAAFSTKSDVWSFGILLWEI 198
>pdb|3C4X|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.9a
pdb|3C4X|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.9a
pdb|3C4Y|A Chain A, Crystal Structure Of Apo Form Of G Protein Coupled
Receptor Kinase 1 At 7.51a
pdb|3C4Y|B Chain B, Crystal Structure Of Apo Form Of G Protein Coupled
Receptor Kinase 1 At 7.51a
pdb|3C4Z|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 1.84a
pdb|3C50|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 2.6a
pdb|3C50|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 2.6a
pdb|3C51|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 3.55a
pdb|3C51|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 3.55a
Length = 543
Score = 58.5 bits (140), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 45/177 (25%), Positives = 79/177 (44%), Gaps = 16/177 (9%)
Query: 59 AFKSFIAECKALRNIRHRNLIKVLTACLGVDYQGNDFKALVYEFMHNRSLKEWLYPISKE 118
++ + E K L + R ++ + A ++ LV M+ ++ +Y + ++
Sbjct: 228 GYQGAMVEKKILAKVHSRFIVSLAYA-----FETKTDLCLVMTIMNGGDIRYHIYNVDED 282
Query: 119 DETYKRPXXXXXXXXXXIAIDVASALNYLHHDCQPVTAHCVLKPSNVLLDDDMTARVGDF 178
+ ++ P + S L +LH Q + LKP NVLLDDD R+ D
Sbjct: 283 NPGFQEPRAIF------YTAQIVSGLEHLH---QRNIIYRDLKPENVLLDDDGNVRISDL 333
Query: 179 GLARFLPPTRTQTSSIDVKGSIGYIAPEYGVGNEVSTIGDVYSYGILLLELMIREKP 235
GLA L +T+T G+ G++APE +G E D ++ G+ L E++ P
Sbjct: 334 GLAVELKAGQTKTKG--YAGTPGFMAPELLLGEEYDFSVDYFALGVTLYEMIAARGP 388
>pdb|3QC9|A Chain A, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|B Chain B, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|C Chain C, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|D Chain D, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
Length = 543
Score = 58.5 bits (140), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 45/177 (25%), Positives = 79/177 (44%), Gaps = 16/177 (9%)
Query: 59 AFKSFIAECKALRNIRHRNLIKVLTACLGVDYQGNDFKALVYEFMHNRSLKEWLYPISKE 118
++ + E K L + R ++ + A ++ LV M+ ++ +Y + ++
Sbjct: 228 GYQGAMVEKKILAKVHSRFIVSLAYA-----FETKTDLCLVMTIMNGGDIRYHIYNVDED 282
Query: 119 DETYKRPXXXXXXXXXXIAIDVASALNYLHHDCQPVTAHCVLKPSNVLLDDDMTARVGDF 178
+ ++ P + S L +LH Q + LKP NVLLDDD R+ D
Sbjct: 283 NPGFQEPRAIF------YTAQIVSGLEHLH---QRNIIYRDLKPENVLLDDDGNVRISDL 333
Query: 179 GLARFLPPTRTQTSSIDVKGSIGYIAPEYGVGNEVSTIGDVYSYGILLLELMIREKP 235
GLA L +T+T G+ G++APE +G E D ++ G+ L E++ P
Sbjct: 334 GLAVELKAGQTKTKG--YAGTPGFMAPELLLGEEYDFSVDYFALGVTLYEMIAARGP 388
>pdb|3MIY|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Sunitinib
pdb|3MIY|B Chain B, X-Ray Crystal Structure Of Itk Complexed With Sunitinib
pdb|3MJ1|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Inhibitor
Ro5191614
pdb|3MJ2|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Inhibitor
Bms-509744
Length = 266
Score = 58.5 bits (140), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 50/202 (24%), Positives = 85/202 (42%), Gaps = 33/202 (16%)
Query: 44 ISAGTFGFSHLR-------------RQGAF--KSFIAECKALRNIRHRNLIKVLTACLGV 88
I +G FG HL R+GA + FI E + + + H L+++ CL
Sbjct: 15 IGSGQFGLVHLGYWLNKDKVAIKTIREGAMSEEDFIEEAEVMMKLSHPKLVQLYGVCLE- 73
Query: 89 DYQGNDFKALVYEFMHNRSLKEWLYPISKEDETYKRPXXXXXXXXXXIAIDVASALNYLH 148
LV+EFM + L ++L + + +DV + YL
Sbjct: 74 ----QAPICLVFEFMEHGCLSDYLR---------TQRGLFAAETLLGMCLDVCEGMAYLE 120
Query: 149 HDCQPVTAHCVLKPSNVLLDDDMTARVGDFGLARFLPPTRTQTSSIDVKGSIGYIAPEYG 208
+ H L N L+ ++ +V DFG+ RF+ + TSS K + + +PE
Sbjct: 121 ---EASVIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQ-YTSSTGTKFPVKWASPEVF 176
Query: 209 VGNEVSTIGDVYSYGILLLELM 230
+ S+ DV+S+G+L+ E+
Sbjct: 177 SFSRYSSKSDVWSFGVLMWEVF 198
>pdb|3C4W|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.7a
pdb|3C4W|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.7a
Length = 543
Score = 58.5 bits (140), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 45/177 (25%), Positives = 79/177 (44%), Gaps = 16/177 (9%)
Query: 59 AFKSFIAECKALRNIRHRNLIKVLTACLGVDYQGNDFKALVYEFMHNRSLKEWLYPISKE 118
++ + E K L + R ++ + A ++ LV M+ ++ +Y + ++
Sbjct: 228 GYQGAMVEKKILAKVHSRFIVSLAYA-----FETKTDLCLVMTIMNGGDIRYHIYNVDED 282
Query: 119 DETYKRPXXXXXXXXXXIAIDVASALNYLHHDCQPVTAHCVLKPSNVLLDDDMTARVGDF 178
+ ++ P + S L +LH Q + LKP NVLLDDD R+ D
Sbjct: 283 NPGFQEPRAIF------YTAQIVSGLEHLH---QRNIIYRDLKPENVLLDDDGNVRISDL 333
Query: 179 GLARFLPPTRTQTSSIDVKGSIGYIAPEYGVGNEVSTIGDVYSYGILLLELMIREKP 235
GLA L +T+T G+ G++APE +G E D ++ G+ L E++ P
Sbjct: 334 GLAVELKAGQTKTKG--YAGTPGFMAPELLLGEEYDFSVDYFALGVTLYEMIAARGP 388
>pdb|3T8O|A Chain A, Rhodopsin Kinase (grk1) L166k Mutant At 2.5a Resolution
Length = 543
Score = 58.5 bits (140), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 45/177 (25%), Positives = 79/177 (44%), Gaps = 16/177 (9%)
Query: 59 AFKSFIAECKALRNIRHRNLIKVLTACLGVDYQGNDFKALVYEFMHNRSLKEWLYPISKE 118
++ + E K L + R ++ + A ++ LV M+ ++ +Y + ++
Sbjct: 228 GYQGAMVEKKILAKVHSRFIVSLAYA-----FETKTDLCLVMTIMNGGDIRYHIYNVDED 282
Query: 119 DETYKRPXXXXXXXXXXIAIDVASALNYLHHDCQPVTAHCVLKPSNVLLDDDMTARVGDF 178
+ ++ P + S L +LH Q + LKP NVLLDDD R+ D
Sbjct: 283 NPGFQEPRAIF------YTAQIVSGLEHLH---QRNIIYRDLKPENVLLDDDGNVRISDL 333
Query: 179 GLARFLPPTRTQTSSIDVKGSIGYIAPEYGVGNEVSTIGDVYSYGILLLELMIREKP 235
GLA L +T+T G+ G++APE +G E D ++ G+ L E++ P
Sbjct: 334 GLAVELKAGQTKTKG--YAGTPGFMAPELLLGEEYDFSVDYFALGVTLYEMIAARGP 388
>pdb|3DTC|A Chain A, Crystal Structure Of Mixed-Lineage Kinase Mlk1 Complexed
With Compound 16
Length = 271
Score = 58.2 bits (139), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 36/107 (33%), Positives = 57/107 (53%), Gaps = 12/107 (11%)
Query: 137 AIDVASALNYLHHDCQPVTAHCVLKPSNVLL-----DDDMT---ARVGDFGLARFLPPTR 188
A+ +A +NYLH + H LK SN+L+ + D++ ++ DFGLAR
Sbjct: 111 AVQIARGMNYLHDEAIVPIIHRDLKSSNILILQKVENGDLSNKILKITDFGLAR----EW 166
Query: 189 TQTSSIDVKGSIGYIAPEYGVGNEVSTIGDVYSYGILLLELMIREKP 235
+T+ + G+ ++APE + S DV+SYG+LL EL+ E P
Sbjct: 167 HRTTKMSAAGAYAWMAPEVIRASMFSKGSDVWSYGVLLWELLTGEVP 213
>pdb|1AD5|A Chain A, Src Family Kinase Hck-Amp-Pnp Complex
pdb|1AD5|B Chain B, Src Family Kinase Hck-Amp-Pnp Complex
pdb|2HCK|A Chain A, Src Family Kinase Hck-Quercetin Complex
pdb|2HCK|B Chain B, Src Family Kinase Hck-Quercetin Complex
Length = 438
Score = 58.2 bits (139), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 46/174 (26%), Positives = 79/174 (45%), Gaps = 32/174 (18%)
Query: 59 AFKSFIAECKALRNIRHRNLIKVLTACLGVDYQGNDFKALVYEFMHNRSLKEWLYPISKE 118
+ ++F+AE ++ ++H L+K+ + ++ EFM SL ++L K
Sbjct: 220 SVEAFLAEANVMKTLQHDKLVKLHAVVT------KEPIYIITEFMAKGSLLDFL----KS 269
Query: 119 DETYKRPXXXXXXXXXXIAIDVA--SALNYLHHDCQPVTAHCVLKPSNVLLDDDMTARVG 176
DE K+P IA +A NY+H D L+ +N+L+ + ++
Sbjct: 270 DEGSKQPLPKLIDFSAQIAEGMAFIEQRNYIHRD---------LRAANILVSASLVCKIA 320
Query: 177 DFGLARFLPPTRTQTSSIDVKGSIGYIAPEYGVGNEVSTIGDVYSYGILLLELM 230
DFGLAR + K I + APE + DV+S+GILL+E++
Sbjct: 321 DFGLAR-----------VGAKFPIKWTAPEAINFGSFTIKSDVWSFGILLMEIV 363
>pdb|2QQ7|A Chain A, Crystal Structure Of Drug Resistant Src Kinase Domain With
Irreversible Inhibitor
pdb|2QQ7|B Chain B, Crystal Structure Of Drug Resistant Src Kinase Domain With
Irreversible Inhibitor
pdb|2QI8|A Chain A, Crystal Structure Of Drug Resistant Src Kinase Domain
pdb|2QI8|B Chain B, Crystal Structure Of Drug Resistant Src Kinase Domain
pdb|3F3W|A Chain A, Drug Resistant Csrc Kinase Domain In Complex With
Inhibitor Rl45 (Type Ii)
pdb|3F3W|B Chain B, Drug Resistant Csrc Kinase Domain In Complex With
Inhibitor Rl45 (Type Ii)
pdb|3LOK|A Chain A, Drug Resistant Csrc Kinase Domain In Complex With Covalent
Inhibitor Pd168393
pdb|3LOK|B Chain B, Drug Resistant Csrc Kinase Domain In Complex With Covalent
Inhibitor Pd168393
Length = 286
Score = 58.2 bits (139), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 43/173 (24%), Positives = 77/173 (44%), Gaps = 20/173 (11%)
Query: 61 KSFIAECKALRNIRHRNLIKVLTACLGVDYQGNDFKALVYEFMHNRSLKEWLYPISKEDE 120
++F+ E + ++ +RH L+++ + +V E+M L ++L E
Sbjct: 58 EAFLQEAQVMKKLRHEKLVQLYAVV------SEEPIYIVMEYMSKGCLLDFL---KGEMG 108
Query: 121 TYKR-PXXXXXXXXXXIAIDVASALNYLHHDCQPVTAHCVLKPSNVLLDDDMTARVGDFG 179
Y R P + +NY+H D L+ +N+L+ +++ +V DFG
Sbjct: 109 KYLRLPQLVDMAAQIASGMAYVERMNYVHRD---------LRAANILVGENLVCKVADFG 159
Query: 180 LARFLPPTRTQTSSIDVKGSIGYIAPEYGVGNEVSTIGDVYSYGILLLELMIR 232
LAR + T+ K I + APE + + DV+S+GILL EL +
Sbjct: 160 LARLI-EDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTK 211
>pdb|3DK7|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK7|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 277
Score = 58.2 bits (139), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 44/169 (26%), Positives = 81/169 (47%), Gaps = 17/169 (10%)
Query: 61 KSFIAECKALRNIRHRNLIKVLTACLGVDYQGNDFKALVYEFMHNRSLKEWLYPISKEDE 120
+ F+ E ++ I+H NL+++L C + F ++ EFM +L ++L ++++
Sbjct: 52 EEFLKEAAVMKEIKHPNLVQLLGVCT----REPPFYIII-EFMTYGNLLDYLRECNRQE- 105
Query: 121 TYKRPXXXXXXXXXXIAIDVASALNYLHHDCQPVTAHCVLKPSNVLLDDDMTARVGDFGL 180
+A ++SA+ YL + H L N L+ ++ +V DFGL
Sbjct: 106 -------VSAVVLLYMATQISSAMEYLE---KKNFIHRDLAARNCLVGENHLVKVADFGL 155
Query: 181 ARFLPPTRTQTSSIDVKGSIGYIAPEYGVGNEVSTIGDVYSYGILLLEL 229
+R + T T+ K I + APE N+ S DV+++G+LL E+
Sbjct: 156 SRLMT-GDTXTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEI 203
>pdb|3DK6|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK6|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 293
Score = 58.2 bits (139), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 44/169 (26%), Positives = 81/169 (47%), Gaps = 17/169 (10%)
Query: 61 KSFIAECKALRNIRHRNLIKVLTACLGVDYQGNDFKALVYEFMHNRSLKEWLYPISKEDE 120
+ F+ E ++ I+H NL+++L C + F ++ EFM +L ++L ++++
Sbjct: 52 EEFLKEAAVMKEIKHPNLVQLLGVCT----REPPF-YIITEFMTYGNLLDYLRECNRQE- 105
Query: 121 TYKRPXXXXXXXXXXIAIDVASALNYLHHDCQPVTAHCVLKPSNVLLDDDMTARVGDFGL 180
+A ++SA+ YL + H L N L+ ++ +V DFGL
Sbjct: 106 -------VSAVVLLYMATQISSAMEYLE---KKNFIHRDLAARNCLVGENHLVKVADFGL 155
Query: 181 ARFLPPTRTQTSSIDVKGSIGYIAPEYGVGNEVSTIGDVYSYGILLLEL 229
+R + T T+ K I + APE N+ S DV+++G+LL E+
Sbjct: 156 SRLMT-GDTXTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEI 203
>pdb|2HWO|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor
pdb|2HWO|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor
pdb|2HWP|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor Pd168393
pdb|2HWP|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor Pd168393
pdb|2QLQ|A Chain A, Crystal Structure Of Src Kinase Domain With Covalent
Inhibitor Rl3
pdb|2QLQ|B Chain B, Crystal Structure Of Src Kinase Domain With Covalent
Inhibitor Rl3
pdb|3F3T|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl38 (Type
Iii)
pdb|3F3T|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl38 (Type
Iii)
pdb|3F3U|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl37 (Type
Iii)
pdb|3F3U|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl37 (Type
Iii)
pdb|3F3V|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl45 (Type
Ii)
pdb|3F3V|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl45 (Type
Ii)
pdb|3G5D|A Chain A, Kinase Domain Of Csrc In Complex With Dasatinib
pdb|3G5D|B Chain B, Kinase Domain Of Csrc In Complex With Dasatinib
pdb|3TZ7|A Chain A, Kinase Domain Of Csrc In Complex With Rl103
pdb|3TZ7|B Chain B, Kinase Domain Of Csrc In Complex With Rl103
pdb|3TZ8|A Chain A, Kinase Domain Of Csrc In Complex With Rl104
pdb|3TZ8|B Chain B, Kinase Domain Of Csrc In Complex With Rl104
pdb|3TZ9|A Chain A, Kinase Domain Of Csrc In Complex With Rl130
pdb|3TZ9|B Chain B, Kinase Domain Of Csrc In Complex With Rl130
Length = 286
Score = 57.8 bits (138), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 43/173 (24%), Positives = 77/173 (44%), Gaps = 20/173 (11%)
Query: 61 KSFIAECKALRNIRHRNLIKVLTACLGVDYQGNDFKALVYEFMHNRSLKEWLYPISKEDE 120
++F+ E + ++ +RH L+++ + +V E+M L ++L E
Sbjct: 58 EAFLQEAQVMKKLRHEKLVQLYAVV------SEEPIYIVTEYMSKGCLLDFL---KGEMG 108
Query: 121 TYKR-PXXXXXXXXXXIAIDVASALNYLHHDCQPVTAHCVLKPSNVLLDDDMTARVGDFG 179
Y R P + +NY+H D L+ +N+L+ +++ +V DFG
Sbjct: 109 KYLRLPQLVDMAAQIASGMAYVERMNYVHRD---------LRAANILVGENLVCKVADFG 159
Query: 180 LARFLPPTRTQTSSIDVKGSIGYIAPEYGVGNEVSTIGDVYSYGILLLELMIR 232
LAR + T+ K I + APE + + DV+S+GILL EL +
Sbjct: 160 LARLI-EDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTK 211
>pdb|2Z60|A Chain A, Crystal Structure Of The T315i Mutant Of Abl Kinase Bound
With Ppy-A
pdb|3IK3|A Chain A, Ap24534, A Pan-Bcr-Abl Inhibitor For Chronic Myeloid
Leukemi Potently Inhibits The T315i Mutant And Overcomes
Mutation-B Resistance
pdb|3IK3|B Chain B, Ap24534, A Pan-Bcr-Abl Inhibitor For Chronic Myeloid
Leukemi Potently Inhibits The T315i Mutant And Overcomes
Mutation-B Resistance
Length = 288
Score = 57.8 bits (138), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 44/169 (26%), Positives = 81/169 (47%), Gaps = 17/169 (10%)
Query: 61 KSFIAECKALRNIRHRNLIKVLTACLGVDYQGNDFKALVYEFMHNRSLKEWLYPISKEDE 120
+ F+ E ++ I+H NL+++L C + F ++ EFM +L ++L ++++
Sbjct: 54 EEFLKEAAVMKEIKHPNLVQLLGVCT----REPPFYIII-EFMTYGNLLDYLRECNRQE- 107
Query: 121 TYKRPXXXXXXXXXXIAIDVASALNYLHHDCQPVTAHCVLKPSNVLLDDDMTARVGDFGL 180
+A ++SA+ YL + H L N L+ ++ +V DFGL
Sbjct: 108 -------VSAVVLLYMATQISSAMEYLE---KKNFIHRDLAARNCLVGENHLVKVADFGL 157
Query: 181 ARFLPPTRTQTSSIDVKGSIGYIAPEYGVGNEVSTIGDVYSYGILLLEL 229
+R + T T+ K I + APE N+ S DV+++G+LL E+
Sbjct: 158 SRLMT-GDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEI 205
>pdb|3GVU|A Chain A, The Crystal Structure Of Human Abl2 In Complex With
Gleevec
pdb|3HMI|A Chain A, The Crystal Structure Of Human Abl2 In Complex With
5-Amino-3-{[4-
(Aminosulfonyl)phenyl]amino}-N-(2,
6-Difluorophenyl)-1h-1,2,4- Triazole-1-Carbothioamide
pdb|2XYN|A Chain A, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
pdb|2XYN|B Chain B, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
pdb|2XYN|C Chain C, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
Length = 292
Score = 57.8 bits (138), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 46/170 (27%), Positives = 81/170 (47%), Gaps = 19/170 (11%)
Query: 61 KSFIAECKALRNIRHRNLIKVLTAC-LGVDYQGNDFKALVYEFMHNRSLKEWLYPISKED 119
+ F+ E ++ I+H NL+++L C L + +V E+M +L ++L ++E+
Sbjct: 73 EEFLKEAAVMKEIKHPNLVQLLGVCTLEPPFY------IVTEYMPYGNLLDYLRECNREE 126
Query: 120 ETYKRPXXXXXXXXXXIAIDVASALNYLHHDCQPVTAHCVLKPSNVLLDDDMTARVGDFG 179
T +A ++SA+ YL + H L N L+ ++ +V DFG
Sbjct: 127 VT--------AVVLLYMATQISSAMEYLE---KKNFIHRDLAARNCLVGENHVVKVADFG 175
Query: 180 LARFLPPTRTQTSSIDVKGSIGYIAPEYGVGNEVSTIGDVYSYGILLLEL 229
L+R + T T+ K I + APE N S DV+++G+LL E+
Sbjct: 176 LSRLMT-GDTYTAHAGAKFPIKWTAPESLAYNTFSIKSDVWAFGVLLWEI 224
>pdb|2V7A|A Chain A, Crystal Structure Of The T315i Abl Mutant In Complex With
The Inhibitor Pha-739358
pdb|2V7A|B Chain B, Crystal Structure Of The T315i Abl Mutant In Complex With
The Inhibitor Pha-739358
Length = 286
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 44/169 (26%), Positives = 81/169 (47%), Gaps = 17/169 (10%)
Query: 61 KSFIAECKALRNIRHRNLIKVLTACLGVDYQGNDFKALVYEFMHNRSLKEWLYPISKEDE 120
+ F+ E ++ I+H NL+++L C + F ++ EFM +L ++L ++++
Sbjct: 55 EEFLKEAAVMKEIKHPNLVQLLGVCT----REPPFYIII-EFMTYGNLLDYLRECNRQE- 108
Query: 121 TYKRPXXXXXXXXXXIAIDVASALNYLHHDCQPVTAHCVLKPSNVLLDDDMTARVGDFGL 180
+A ++SA+ YL + H L N L+ ++ +V DFGL
Sbjct: 109 -------VNAVVLLYMATQISSAMEYLE---KKNFIHRDLAARNCLVGENHLVKVADFGL 158
Query: 181 ARFLPPTRTQTSSIDVKGSIGYIAPEYGVGNEVSTIGDVYSYGILLLEL 229
+R + T T+ K I + APE N+ S DV+++G+LL E+
Sbjct: 159 SRLMT-GDTXTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEI 206
>pdb|3OY3|A Chain A, Crystal Structure Of Abl T315i Mutant Kinase Domain Bound
With A Dfg- Out Inhibitor Ap24589
pdb|3OY3|B Chain B, Crystal Structure Of Abl T315i Mutant Kinase Domain Bound
With A Dfg- Out Inhibitor Ap24589
Length = 284
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 44/169 (26%), Positives = 81/169 (47%), Gaps = 17/169 (10%)
Query: 61 KSFIAECKALRNIRHRNLIKVLTACLGVDYQGNDFKALVYEFMHNRSLKEWLYPISKEDE 120
+ F+ E ++ I+H NL+++L C + F ++ EFM +L ++L ++++
Sbjct: 54 EEFLKEAAVMKEIKHPNLVQLLGVCT----REPPFYIII-EFMTYGNLLDYLRECNRQE- 107
Query: 121 TYKRPXXXXXXXXXXIAIDVASALNYLHHDCQPVTAHCVLKPSNVLLDDDMTARVGDFGL 180
+A ++SA+ YL + H L N L+ ++ +V DFGL
Sbjct: 108 -------VSAVVLLYMATQISSAMEYLE---KKNFIHRDLAARNCLVGENHLVKVADFGL 157
Query: 181 ARFLPPTRTQTSSIDVKGSIGYIAPEYGVGNEVSTIGDVYSYGILLLEL 229
+R + T T+ K I + APE N+ S DV+++G+LL E+
Sbjct: 158 SRLMT-GDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEI 205
>pdb|4AW5|A Chain A, Complex Of The Ephb4 Kinase Domain With An Oxindole
Inhibitor
Length = 291
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 51/203 (25%), Positives = 91/203 (44%), Gaps = 29/203 (14%)
Query: 40 EENLISAGTFGFSHLRRQGAFKSFIAECKALRNIRHRNLIK---VLTACLGVDYQGNDFK 96
+E+ ++ T + RQ + F++E + H N+I+ V+T + V
Sbjct: 41 KESCVAIKTLKGGYTERQR--REFLSEASIMGQFEHPNIIRLEGVVTNSMPV-------- 90
Query: 97 ALVYEFMHNRSLKEWLYPISKEDETYKRPXXXXXXXXXXIAIDVASALNYLHHDCQPVTA 156
++ EFM N +L +L D + + + ++Y+H D
Sbjct: 91 MILTEFMENGALDSFL---RLNDGQFTVIQLVGMLRGIASGMRYLAEMSYVHRD------ 141
Query: 157 HCVLKPSNVLLDDDMTARVGDFGLARFLPPTR---TQTSSIDVKGSIGYIAPEYGVGNEV 213
L N+L++ ++ +V DFGL+RFL T TSS+ K I + APE +
Sbjct: 142 ---LAARNILVNSNLVCKVSDFGLSRFLEENSSDPTYTSSLGGKIPIRWTAPEAIAFRKF 198
Query: 214 STIGDVYSYGILLLELM-IREKP 235
++ D +SYGI++ E+M E+P
Sbjct: 199 TSASDAWSYGIVMWEVMSFGERP 221
>pdb|2PTK|A Chain A, Chicken Src Tyrosine Kinase
Length = 453
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 43/173 (24%), Positives = 77/173 (44%), Gaps = 20/173 (11%)
Query: 61 KSFIAECKALRNIRHRNLIKVLTACLGVDYQGNDFKALVYEFMHNRSLKEWLYPISKEDE 120
++F+ E + ++ +RH L+++ + +V E+M SL ++L E
Sbjct: 225 EAFLQEAQVMKKLRHEKLVQLYAVV------SEEPIYIVTEYMSKGSLLDFL---KGEMG 275
Query: 121 TYKR-PXXXXXXXXXXIAIDVASALNYLHHDCQPVTAHCVLKPSNVLLDDDMTARVGDFG 179
Y R P + +NY+H D L+ +N+L+ +++ +V DFG
Sbjct: 276 KYLRLPQLVDMAAQIASGMAYVERMNYVHRD---------LRAANILVGENLVCKVADFG 326
Query: 180 LARFLPPTRTQTSSIDVKGSIGYIAPEYGVGNEVSTIGDVYSYGILLLELMIR 232
L R + T+ K I + APE + + DV+S+GILL EL +
Sbjct: 327 LGRLIEDNE-YTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTK 378
>pdb|4E6D|A Chain A, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 7
pdb|4E6D|B Chain B, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 7
pdb|4E6Q|A Chain A, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 12
pdb|4E6Q|B Chain B, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 12
Length = 298
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 45/186 (24%), Positives = 80/186 (43%), Gaps = 21/186 (11%)
Query: 60 FKSFIAECKALRNIRHRNLIKVLTACLGVDYQGNDFKALVYEFMHNRSLKEWLYPISKED 119
+ F E + L++++H N++K C G L+ EF+ SL+E+L K
Sbjct: 58 LRDFEREIEILKSLQHDNIVKYKGVCYSA---GRRNLKLIMEFLPYGSLREYL---QKHK 111
Query: 120 ETYKRPXXXXXXXXXXIAIDVASALNYLHHDCQPVTAHCVLKPSNVLLDDDMTARVGDFG 179
E ++ Y+H D L N+L++++ ++GDFG
Sbjct: 112 ERIDHIKLLQYTSQICKGMEYLGTKRYIHRD---------LATRNILVENENRVKIGDFG 162
Query: 180 LARFLPPTRTQTSSIDVKGS-IGYIAPEYGVGNEVSTIGDVYSYGILLLELMI-----RE 233
L + LP + + S I + APE ++ S DV+S+G++L EL +
Sbjct: 163 LTKVLPQDKEXXKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYIEKSKS 222
Query: 234 KPSDIM 239
P++ M
Sbjct: 223 PPAEFM 228
>pdb|2F4J|A Chain A, Structure Of The Kinase Domain Of An Imatinib-Resistant
Abl Mutant In Complex With The Aurora Kinase Inhibitor
Vx-680
Length = 287
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 44/169 (26%), Positives = 81/169 (47%), Gaps = 17/169 (10%)
Query: 61 KSFIAECKALRNIRHRNLIKVLTACLGVDYQGNDFKALVYEFMHNRSLKEWLYPISKEDE 120
+ F+ E ++ I+H NL+++L C + F ++ EFM +L ++L ++++
Sbjct: 55 EEFLKEAAVMKEIKHPNLVQLLGVCT----REPPF-YIITEFMTYGNLLDYLRECNRQE- 108
Query: 121 TYKRPXXXXXXXXXXIAIDVASALNYLHHDCQPVTAHCVLKPSNVLLDDDMTARVGDFGL 180
+A ++SA+ YL + H L N L+ ++ +V DFGL
Sbjct: 109 -------VNAVVLLYMATQISSAMEYLE---KKNFIHRDLAARNCLVGENHLVKVADFGL 158
Query: 181 ARFLPPTRTQTSSIDVKGSIGYIAPEYGVGNEVSTIGDVYSYGILLLEL 229
+R + T T+ K I + APE N+ S DV+++G+LL E+
Sbjct: 159 SRLMT-GDTYTAPAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEI 206
>pdb|1UU9|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-3
Length = 286
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 37/139 (26%), Positives = 65/139 (46%), Gaps = 8/139 (5%)
Query: 139 DVASALNYLHHDCQPVTAHCVLKPSNVLLDDDMTARVGDFGLARFLPPTRTQTSSIDVKG 198
++ SAL YLH H LKP N+LL++DM ++ DFG A+ L P Q + G
Sbjct: 117 EIVSALEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVG 173
Query: 199 SIGYIAPEYGVGNEVSTIGDVYSYGILLLELM-----IREKPSDIMFEGDMNLHKFAKMA 253
+ Y++PE D+++ G ++ +L+ R ++F+ + L
Sbjct: 174 TAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYDFPEK 233
Query: 254 LSNHVKDIVDSILLNDDEK 272
+D+V+ +L+ D K
Sbjct: 234 FFPKARDLVEKLLVLDATK 252
>pdb|3NUS|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment8
pdb|3NUU|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment11
pdb|3NUY|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment17
Length = 286
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 37/139 (26%), Positives = 65/139 (46%), Gaps = 8/139 (5%)
Query: 139 DVASALNYLHHDCQPVTAHCVLKPSNVLLDDDMTARVGDFGLARFLPPTRTQTSSIDVKG 198
++ SAL YLH H LKP N+LL++DM ++ DFG A+ L P Q + G
Sbjct: 116 EIVSALEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVG 172
Query: 199 SIGYIAPEYGVGNEVSTIGDVYSYGILLLELM-----IREKPSDIMFEGDMNLHKFAKMA 253
+ Y++PE D+++ G ++ +L+ R ++F+ + L
Sbjct: 173 TAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYDFPEK 232
Query: 254 LSNHVKDIVDSILLNDDEK 272
+D+V+ +L+ D K
Sbjct: 233 FFPKARDLVEKLLVLDATK 251
>pdb|3OXZ|A Chain A, Crystal Structure Of Abl Kinase Domain Bound With A
Dfg-Out Inhibitor Ap24534
Length = 284
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 44/169 (26%), Positives = 81/169 (47%), Gaps = 17/169 (10%)
Query: 61 KSFIAECKALRNIRHRNLIKVLTACLGVDYQGNDFKALVYEFMHNRSLKEWLYPISKEDE 120
+ F+ E ++ I+H NL+++L C + F ++ EFM +L ++L ++++
Sbjct: 54 EEFLKEAAVMKEIKHPNLVQLLGVCT----REPPF-YIITEFMTYGNLLDYLRECNRQE- 107
Query: 121 TYKRPXXXXXXXXXXIAIDVASALNYLHHDCQPVTAHCVLKPSNVLLDDDMTARVGDFGL 180
+A ++SA+ YL + H L N L+ ++ +V DFGL
Sbjct: 108 -------VSAVVLLYMATQISSAMEYLE---KKNFIHRDLAARNCLVGENHLVKVADFGL 157
Query: 181 ARFLPPTRTQTSSIDVKGSIGYIAPEYGVGNEVSTIGDVYSYGILLLEL 229
+R + T T+ K I + APE N+ S DV+++G+LL E+
Sbjct: 158 SRLMT-GDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEI 205
>pdb|3QRJ|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain T315i
Mutant In Complex With Dcc-2036
pdb|3QRJ|B Chain B, The Crystal Structure Of Human Abl1 Kinase Domain T315i
Mutant In Complex With Dcc-2036
Length = 277
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 44/169 (26%), Positives = 81/169 (47%), Gaps = 17/169 (10%)
Query: 61 KSFIAECKALRNIRHRNLIKVLTACLGVDYQGNDFKALVYEFMHNRSLKEWLYPISKEDE 120
+ F+ E ++ I+H NL+++L C + F ++ EFM +L ++L ++++
Sbjct: 59 EEFLKEAAVMKEIKHPNLVQLLGVCT----REPPFYIII-EFMTYGNLLDYLRECNRQE- 112
Query: 121 TYKRPXXXXXXXXXXIAIDVASALNYLHHDCQPVTAHCVLKPSNVLLDDDMTARVGDFGL 180
+A ++SA+ YL + H L N L+ ++ +V DFGL
Sbjct: 113 -------VNAVVLLYMATQISSAMEYLE---KKNFIHRDLAARNCLVGENHLVKVADFGL 162
Query: 181 ARFLPPTRTQTSSIDVKGSIGYIAPEYGVGNEVSTIGDVYSYGILLLEL 229
+R + T T+ K I + APE N+ S DV+++G+LL E+
Sbjct: 163 SRLMT-GDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEI 210
>pdb|1FPU|A Chain A, Crystal Structure Of Abl Kinase Domain In Complex With A
Small Molecule Inhibitor
pdb|1FPU|B Chain B, Crystal Structure Of Abl Kinase Domain In Complex With A
Small Molecule Inhibitor
pdb|1IEP|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Sti-571.
pdb|1IEP|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Sti-571.
pdb|1M52|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Pd173955
pdb|1M52|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Pd173955
pdb|1OPJ|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|1OPJ|B Chain B, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|2HZN|A Chain A, Abl Kinase Domain In Complex With Nvp-Afg210
pdb|3K5V|A Chain A, Structure Of Abl Kinase In Complex With Imatinib And Gnf-2
pdb|3K5V|B Chain B, Structure Of Abl Kinase In Complex With Imatinib And Gnf-2
pdb|3MS9|A Chain A, Abl Kinase In Complex With Imatinib And A Fragment (Frag1)
I Myristate Pocket
pdb|3MS9|B Chain B, Abl Kinase In Complex With Imatinib And A Fragment (Frag1)
I Myristate Pocket
pdb|3MSS|A Chain A, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|B Chain B, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|C Chain C, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|D Chain D, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
Length = 293
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 44/169 (26%), Positives = 81/169 (47%), Gaps = 17/169 (10%)
Query: 61 KSFIAECKALRNIRHRNLIKVLTACLGVDYQGNDFKALVYEFMHNRSLKEWLYPISKEDE 120
+ F+ E ++ I+H NL+++L C + F ++ EFM +L ++L ++++
Sbjct: 59 EEFLKEAAVMKEIKHPNLVQLLGVCT----REPPF-YIITEFMTYGNLLDYLRECNRQE- 112
Query: 121 TYKRPXXXXXXXXXXIAIDVASALNYLHHDCQPVTAHCVLKPSNVLLDDDMTARVGDFGL 180
+A ++SA+ YL + H L N L+ ++ +V DFGL
Sbjct: 113 -------VSAVVLLYMATQISSAMEYLE---KKNFIHRDLAARNCLVGENHLVKVADFGL 162
Query: 181 ARFLPPTRTQTSSIDVKGSIGYIAPEYGVGNEVSTIGDVYSYGILLLEL 229
+R + T T+ K I + APE N+ S DV+++G+LL E+
Sbjct: 163 SRLMT-GDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEI 210
>pdb|3NAX|A Chain A, Pdk1 In Complex With Inhibitor Mp7
Length = 311
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 37/139 (26%), Positives = 65/139 (46%), Gaps = 8/139 (5%)
Query: 139 DVASALNYLHHDCQPVTAHCVLKPSNVLLDDDMTARVGDFGLARFLPPTRTQTSSIDVKG 198
++ SAL YLH H LKP N+LL++DM ++ DFG A+ L P Q + G
Sbjct: 137 EIVSALEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANSFVG 193
Query: 199 SIGYIAPEYGVGNEVSTIGDVYSYGILLLELM-----IREKPSDIMFEGDMNLHKFAKMA 253
+ Y++PE D+++ G ++ +L+ R ++F+ + L
Sbjct: 194 TAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYDFPEK 253
Query: 254 LSNHVKDIVDSILLNDDEK 272
+D+V+ +L+ D K
Sbjct: 254 FFPKARDLVEKLLVLDATK 272
>pdb|2QOH|A Chain A, Crystal Structure Of Abl Kinase Bound With Ppy-a
pdb|2QOH|B Chain B, Crystal Structure Of Abl Kinase Bound With Ppy-a
pdb|3KF4|A Chain A, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KF4|B Chain B, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KFA|A Chain A, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KFA|B Chain B, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
Length = 288
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 44/169 (26%), Positives = 81/169 (47%), Gaps = 17/169 (10%)
Query: 61 KSFIAECKALRNIRHRNLIKVLTACLGVDYQGNDFKALVYEFMHNRSLKEWLYPISKEDE 120
+ F+ E ++ I+H NL+++L C + F ++ EFM +L ++L ++++
Sbjct: 54 EEFLKEAAVMKEIKHPNLVQLLGVCT----REPPF-YIITEFMTYGNLLDYLRECNRQE- 107
Query: 121 TYKRPXXXXXXXXXXIAIDVASALNYLHHDCQPVTAHCVLKPSNVLLDDDMTARVGDFGL 180
+A ++SA+ YL + H L N L+ ++ +V DFGL
Sbjct: 108 -------VSAVVLLYMATQISSAMEYLE---KKNFIHRDLAARNCLVGENHLVKVADFGL 157
Query: 181 ARFLPPTRTQTSSIDVKGSIGYIAPEYGVGNEVSTIGDVYSYGILLLEL 229
+R + T T+ K I + APE N+ S DV+++G+LL E+
Sbjct: 158 SRLMT-GDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEI 205
>pdb|1Z5M|A Chain A, Crystal Structure Of
N1-[3-[[5-bromo-2-[[3-[(1-pyrrolidinylcarbonyl)
Amino]phenyl]amino]-4-pyrimidinyl]amino]propyl]-2,2-
Dimethylpropanediamide Complexed With Human Pdk1
pdb|2PE0|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
5-Hydroxy-3-[1-(1h-Pyrrol-2-Yl)-Eth-(Z)-Ylidene]-1,
3-Dihydro- Indol-2-One Complex
pdb|2PE1|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
{2-Oxo-3-[1-(1h-Pyrrol-2-Yl)-Eth-(Z)-Ylidene]-2,
3-Dihydro-1h- Indol-5-Yl}-Urea {bx-517} Complex
pdb|2PE2|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
3-{5-[2-Oxo-5-Ureido-1,
2-Dihydro-Indol-(3z)-Ylidenemethyl]-1h-
Pyrrol-3-Yl}-N-(2-Piperidin-1-Yl-Ethyl)-Benzamide
Complex
Length = 286
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 37/139 (26%), Positives = 65/139 (46%), Gaps = 8/139 (5%)
Query: 139 DVASALNYLHHDCQPVTAHCVLKPSNVLLDDDMTARVGDFGLARFLPPTRTQTSSIDVKG 198
++ SAL YLH H LKP N+LL++DM ++ DFG A+ L P Q + G
Sbjct: 115 EIVSALEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVG 171
Query: 199 SIGYIAPEYGVGNEVSTIGDVYSYGILLLELM-----IREKPSDIMFEGDMNLHKFAKMA 253
+ Y++PE D+++ G ++ +L+ R ++F+ + L
Sbjct: 172 TAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYDFPEK 231
Query: 254 LSNHVKDIVDSILLNDDEK 272
+D+V+ +L+ D K
Sbjct: 232 FFPKARDLVEKLLVLDATK 250
>pdb|2G2F|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2F|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2H|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2H|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2I|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2I|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
Length = 287
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 44/169 (26%), Positives = 81/169 (47%), Gaps = 17/169 (10%)
Query: 61 KSFIAECKALRNIRHRNLIKVLTACLGVDYQGNDFKALVYEFMHNRSLKEWLYPISKEDE 120
+ F+ E ++ I+H NL+++L C + F ++ EFM +L ++L ++++
Sbjct: 56 EEFLKEAAVMKEIKHPNLVQLLGVCT----REPPF-YIITEFMTYGNLLDYLRECNRQE- 109
Query: 121 TYKRPXXXXXXXXXXIAIDVASALNYLHHDCQPVTAHCVLKPSNVLLDDDMTARVGDFGL 180
+A ++SA+ YL + H L N L+ ++ +V DFGL
Sbjct: 110 -------VNAVVLLYMATQISSAMEYLE---KKNFIHRDLAARNCLVGENHLVKVADFGL 159
Query: 181 ARFLPPTRTQTSSIDVKGSIGYIAPEYGVGNEVSTIGDVYSYGILLLEL 229
+R + T T+ K I + APE N+ S DV+++G+LL E+
Sbjct: 160 SRLMT-GDTYTAPAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEI 207
>pdb|1H1W|A Chain A, High Resolution Crystal Structure Of The Human Pdk1
Catalytic Domain
pdb|1UVR|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-8
Length = 289
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 37/139 (26%), Positives = 65/139 (46%), Gaps = 8/139 (5%)
Query: 139 DVASALNYLHHDCQPVTAHCVLKPSNVLLDDDMTARVGDFGLARFLPPTRTQTSSIDVKG 198
++ SAL YLH H LKP N+LL++DM ++ DFG A+ L P Q + G
Sbjct: 118 EIVSALEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVG 174
Query: 199 SIGYIAPEYGVGNEVSTIGDVYSYGILLLELM-----IREKPSDIMFEGDMNLHKFAKMA 253
+ Y++PE D+++ G ++ +L+ R ++F+ + L
Sbjct: 175 TAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYDFPEK 234
Query: 254 LSNHVKDIVDSILLNDDEK 272
+D+V+ +L+ D K
Sbjct: 235 FFPKARDLVEKLLVLDATK 253
>pdb|2P0C|A Chain A, Catalytic Domain Of The Proto-Oncogene Tyrosine-Protein
Kina
pdb|2P0C|B Chain B, Catalytic Domain Of The Proto-Oncogene Tyrosine-Protein
Kina
pdb|3BRB|A Chain A, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Tyrosine- Protein Kinase Mer In Complex
With Adp
pdb|3BRB|B Chain B, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Tyrosine- Protein Kinase Mer In Complex
With Adp
pdb|3BPR|A Chain A, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|B Chain B, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|C Chain C, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|D Chain D, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3TCP|A Chain A, Crystal Structure Of The Catalytic Domain Of The
Proto-Oncogene Tyrosine-Protein Kinase Mer In Complex
With Inhibitor Unc569
pdb|3TCP|B Chain B, Crystal Structure Of The Catalytic Domain Of The
Proto-Oncogene Tyrosine-Protein Kinase Mer In Complex
With Inhibitor Unc569
Length = 313
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 44/178 (24%), Positives = 75/178 (42%), Gaps = 11/178 (6%)
Query: 57 QGAFKSFIAECKALRNIRHRNLIKVLTACLGVDYQGNDFKALVYEFMHNRSLKEWLYPIS 116
Q + F++E +++ H N+I++L C+ + QG ++ FM L +L
Sbjct: 77 QREIEEFLSEAACMKDFSHPNVIRLLGVCIEMSSQGIPKPMVILPFMKYGDLHTYLLYSR 136
Query: 117 KEDETYKRPXXXXXXXXXXIAI--DVASALNYLHHDCQPVTAHCVLKPSNVLLDDDMTAR 174
E P IA+ + S N+LH D L N +L DDMT
Sbjct: 137 LETGPKHIPLQTLLKFMVDIALGMEYLSNRNFLHRD---------LAARNCMLRDDMTVC 187
Query: 175 VGDFGLARFLPPTRTQTSSIDVKGSIGYIAPEYGVGNEVSTIGDVYSYGILLLELMIR 232
V DFGL++ + K + +IA E ++ DV+++G+ + E+ R
Sbjct: 188 VADFGLSKKIYSGDYYRQGRIAKMPVKWIAIESLADRVYTSKSDVWAFGVTMWEIATR 245
>pdb|2GQG|A Chain A, X-Ray Crystal Structure Of Dasatinib (Bms-354825) Bound To
Activated Abl Kinase Domain
pdb|2GQG|B Chain B, X-Ray Crystal Structure Of Dasatinib (Bms-354825) Bound To
Activated Abl Kinase Domain
Length = 278
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 44/169 (26%), Positives = 81/169 (47%), Gaps = 17/169 (10%)
Query: 61 KSFIAECKALRNIRHRNLIKVLTACLGVDYQGNDFKALVYEFMHNRSLKEWLYPISKEDE 120
+ F+ E ++ I+H NL+++L C + F ++ EFM +L ++L ++++
Sbjct: 59 EEFLKEAAVMKEIKHPNLVQLLGVCT----REPPF-YIITEFMTYGNLLDYLRECNRQE- 112
Query: 121 TYKRPXXXXXXXXXXIAIDVASALNYLHHDCQPVTAHCVLKPSNVLLDDDMTARVGDFGL 180
+A ++SA+ YL + H L N L+ ++ +V DFGL
Sbjct: 113 -------VNAVVLLYMATQISSAMEYLE---KKNFIHRDLAARNCLVGENHLVKVADFGL 162
Query: 181 ARFLPPTRTQTSSIDVKGSIGYIAPEYGVGNEVSTIGDVYSYGILLLEL 229
+R + T T+ K I + APE N+ S DV+++G+LL E+
Sbjct: 163 SRLMT-GDTXTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEI 210
>pdb|2HEN|A Chain A, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|B Chain B, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|C Chain C, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|D Chain D, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
Length = 286
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 57/217 (26%), Positives = 91/217 (41%), Gaps = 47/217 (21%)
Query: 41 ENLISAGTFG---FSHLRRQG------AFKS------------FIAECKALRNIRHRNLI 79
E +I AG FG HL+ G A K+ F++E + H N+I
Sbjct: 12 EQVIGAGEFGEVCSGHLKLPGKREIFVAIKTLKSGYTEKQRRDFLSEASIMGQFDHPNVI 71
Query: 80 K---VLTACLGVDYQGNDFKALVYEFMHNRSLKEWLYPISKEDETYKRPXXXXXXXXXXI 136
V+T V ++ EFM N SL +L + D +
Sbjct: 72 HLEGVVTKSTPV--------MIITEFMENGSLDSFL---RQNDGQFTVIQLVGMLRGIAA 120
Query: 137 AIDVASALNYLHHDCQPVTAHCVLKPSNVLLDDDMTARVGDFGLARFL---PPTRTQTSS 193
+ + +NY+H L N+L++ ++ +V DFGL+RFL T TS+
Sbjct: 121 GMKYLADMNYVHR---------ALAARNILVNSNLVCKVSDFGLSRFLEDDTSDPTYTSA 171
Query: 194 IDVKGSIGYIAPEYGVGNEVSTIGDVYSYGILLLELM 230
+ K I + APE + ++ DV+SYGI++ E+M
Sbjct: 172 LGGKIPIRWTAPEAIQYRKFTSASDVWSYGIVMWEVM 208
>pdb|2E2B|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Inno-406
pdb|2E2B|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Inno-406
Length = 293
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 44/169 (26%), Positives = 81/169 (47%), Gaps = 17/169 (10%)
Query: 61 KSFIAECKALRNIRHRNLIKVLTACLGVDYQGNDFKALVYEFMHNRSLKEWLYPISKEDE 120
+ F+ E ++ I+H NL+++L C + F ++ EFM +L ++L ++++
Sbjct: 59 EEFLKEAAVMKEIKHPNLVQLLGVCT----REPPF-YIITEFMTYGNLLDYLRECNRQE- 112
Query: 121 TYKRPXXXXXXXXXXIAIDVASALNYLHHDCQPVTAHCVLKPSNVLLDDDMTARVGDFGL 180
+A ++SA+ YL + H L N L+ ++ +V DFGL
Sbjct: 113 -------VNAVVLLYMATQISSAMEYLE---KKNFIHRDLAARNCLVGENHLVKVADFGL 162
Query: 181 ARFLPPTRTQTSSIDVKGSIGYIAPEYGVGNEVSTIGDVYSYGILLLEL 229
+R + T T+ K I + APE N+ S DV+++G+LL E+
Sbjct: 163 SRLMT-GDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEI 210
>pdb|2HIW|A Chain A, Crystal Structure Of Inactive Conformation Abl Kinase
Catalytic Domain Complexed With Type Ii Inhibitor
pdb|2HIW|B Chain B, Crystal Structure Of Inactive Conformation Abl Kinase
Catalytic Domain Complexed With Type Ii Inhibitor
Length = 287
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 44/169 (26%), Positives = 81/169 (47%), Gaps = 17/169 (10%)
Query: 61 KSFIAECKALRNIRHRNLIKVLTACLGVDYQGNDFKALVYEFMHNRSLKEWLYPISKEDE 120
+ F+ E ++ I+H NL+++L C + F ++ EFM +L ++L ++++
Sbjct: 56 EEFLKEAAVMKEIKHPNLVQLLGVCT----REPPF-YIITEFMTYGNLLDYLRECNRQE- 109
Query: 121 TYKRPXXXXXXXXXXIAIDVASALNYLHHDCQPVTAHCVLKPSNVLLDDDMTARVGDFGL 180
+A ++SA+ YL + H L N L+ ++ +V DFGL
Sbjct: 110 -------VNAVVLLYMATQISSAMEYLE---KKNFIHRDLAARNCLVGENHLVKVADFGL 159
Query: 181 ARFLPPTRTQTSSIDVKGSIGYIAPEYGVGNEVSTIGDVYSYGILLLEL 229
+R + T T+ K I + APE N+ S DV+++G+LL E+
Sbjct: 160 SRLMT-GDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEI 207
>pdb|3PYY|A Chain A, Discovery And Characterization Of A Cell-Permeable,
Small-Molecule C- Abl Kinase Activator That Binds To The
Myristoyl Binding Site
pdb|3PYY|B Chain B, Discovery And Characterization Of A Cell-Permeable,
Small-Molecule C- Abl Kinase Activator That Binds To The
Myristoyl Binding Site
Length = 298
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 44/169 (26%), Positives = 81/169 (47%), Gaps = 17/169 (10%)
Query: 61 KSFIAECKALRNIRHRNLIKVLTACLGVDYQGNDFKALVYEFMHNRSLKEWLYPISKEDE 120
+ F+ E ++ I+H NL+++L C + F ++ EFM +L ++L ++++
Sbjct: 67 EEFLKEAAVMKEIKHPNLVQLLGVCT----REPPF-YIITEFMTYGNLLDYLRECNRQE- 120
Query: 121 TYKRPXXXXXXXXXXIAIDVASALNYLHHDCQPVTAHCVLKPSNVLLDDDMTARVGDFGL 180
+A ++SA+ YL + H L N L+ ++ +V DFGL
Sbjct: 121 -------VNAVVLLYMATQISSAMEYLE---KKNFIHRDLAARNCLVGENHLVKVADFGL 170
Query: 181 ARFLPPTRTQTSSIDVKGSIGYIAPEYGVGNEVSTIGDVYSYGILLLEL 229
+R + T T+ K I + APE N+ S DV+++G+LL E+
Sbjct: 171 SRLMT-GDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEI 218
>pdb|2G1T|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|C Chain C, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|D Chain D, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|3UE4|A Chain A, Structural And Spectroscopic Analysis Of The Kinase
Inhibitor Bosutinib Binding To The Abl Tyrosine Kinase
Domain
pdb|3UE4|B Chain B, Structural And Spectroscopic Analysis Of The Kinase
Inhibitor Bosutinib Binding To The Abl Tyrosine Kinase
Domain
Length = 287
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 44/169 (26%), Positives = 81/169 (47%), Gaps = 17/169 (10%)
Query: 61 KSFIAECKALRNIRHRNLIKVLTACLGVDYQGNDFKALVYEFMHNRSLKEWLYPISKEDE 120
+ F+ E ++ I+H NL+++L C + F ++ EFM +L ++L ++++
Sbjct: 56 EEFLKEAAVMKEIKHPNLVQLLGVCT----REPPF-YIITEFMTYGNLLDYLRECNRQE- 109
Query: 121 TYKRPXXXXXXXXXXIAIDVASALNYLHHDCQPVTAHCVLKPSNVLLDDDMTARVGDFGL 180
+A ++SA+ YL + H L N L+ ++ +V DFGL
Sbjct: 110 -------VNAVVLLYMATQISSAMEYLE---KKNFIHRDLAARNCLVGENHLVKVADFGL 159
Query: 181 ARFLPPTRTQTSSIDVKGSIGYIAPEYGVGNEVSTIGDVYSYGILLLEL 229
+R + T T+ K I + APE N+ S DV+++G+LL E+
Sbjct: 160 SRLMT-GDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEI 207
>pdb|2R7B|A Chain A, Crystal Structure Of The Phosphoinositide-Dependent
Kinase- 1 (Pdk-1)catalytic Domain Bound To A
Dibenzonaphthyridine Inhibitor
pdb|3ION|A Chain A, Pdk1 In Complex With Compound 8h
Length = 312
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 44/176 (25%), Positives = 76/176 (43%), Gaps = 18/176 (10%)
Query: 102 FMHNRSLKEWLYPISKEDETYKRPXXXXXXXXXXIAIDVASALNYLHHDCQPVTAHCVLK 161
+ N L +++ I DET R ++ SAL YLH H LK
Sbjct: 114 YAKNGELLKYIRKIGSFDETCTR----------FYTAEIVSALEYLHGKG---IIHRDLK 160
Query: 162 PSNVLLDDDMTARVGDFGLARFLPPTRTQTSSIDVKGSIGYIAPEYGVGNEVSTIGDVYS 221
P N+LL++DM ++ DFG A+ L P Q + G+ Y++PE D+++
Sbjct: 161 PENILLNEDMHIQITDFGTAKVLSPESKQARANSFVGTAQYVSPELLTEKSACKSSDLWA 220
Query: 222 YGILLLELM-----IREKPSDIMFEGDMNLHKFAKMALSNHVKDIVDSILLNDDEK 272
G ++ +L+ R ++F+ + L +D+V+ +L+ D K
Sbjct: 221 LGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYDFPEKFFPKARDLVEKLLVLDATK 276
>pdb|3NUN|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Lead
Compound
Length = 292
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 37/139 (26%), Positives = 65/139 (46%), Gaps = 8/139 (5%)
Query: 139 DVASALNYLHHDCQPVTAHCVLKPSNVLLDDDMTARVGDFGLARFLPPTRTQTSSIDVKG 198
++ SAL YLH H LKP N+LL++DM ++ DFG A+ L P Q + G
Sbjct: 122 EIVSALEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVG 178
Query: 199 SIGYIAPEYGVGNEVSTIGDVYSYGILLLELM-----IREKPSDIMFEGDMNLHKFAKMA 253
+ Y++PE D+++ G ++ +L+ R ++F+ + L
Sbjct: 179 TAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYDFPEK 238
Query: 254 LSNHVKDIVDSILLNDDEK 272
+D+V+ +L+ D K
Sbjct: 239 FFPKARDLVEKLLVLDATK 257
>pdb|3QRI|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dcc- 2036
pdb|3QRI|B Chain B, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dcc- 2036
pdb|3QRK|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dp- 987
Length = 277
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 44/169 (26%), Positives = 81/169 (47%), Gaps = 17/169 (10%)
Query: 61 KSFIAECKALRNIRHRNLIKVLTACLGVDYQGNDFKALVYEFMHNRSLKEWLYPISKEDE 120
+ F+ E ++ I+H NL+++L C + F ++ EFM +L ++L ++++
Sbjct: 59 EEFLKEAAVMKEIKHPNLVQLLGVCT----REPPF-YIITEFMTYGNLLDYLRECNRQE- 112
Query: 121 TYKRPXXXXXXXXXXIAIDVASALNYLHHDCQPVTAHCVLKPSNVLLDDDMTARVGDFGL 180
+A ++SA+ YL + H L N L+ ++ +V DFGL
Sbjct: 113 -------VNAVVLLYMATQISSAMEYLE---KKNFIHRDLAARNCLVGENHLVKVADFGL 162
Query: 181 ARFLPPTRTQTSSIDVKGSIGYIAPEYGVGNEVSTIGDVYSYGILLLEL 229
+R + T T+ K I + APE N+ S DV+++G+LL E+
Sbjct: 163 SRLMT-GDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEI 210
>pdb|2HZ0|A Chain A, Abl Kinase Domain In Complex With Nvp-Aeg082
pdb|2HZ0|B Chain B, Abl Kinase Domain In Complex With Nvp-Aeg082
Length = 270
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 44/169 (26%), Positives = 81/169 (47%), Gaps = 17/169 (10%)
Query: 61 KSFIAECKALRNIRHRNLIKVLTACLGVDYQGNDFKALVYEFMHNRSLKEWLYPISKEDE 120
+ F+ E ++ I+H NL+++L C + F ++ EFM +L ++L ++++
Sbjct: 54 EEFLKEAAVMKEIKHPNLVQLLGVCT----REPPF-YIITEFMTYGNLLDYLRECNRQE- 107
Query: 121 TYKRPXXXXXXXXXXIAIDVASALNYLHHDCQPVTAHCVLKPSNVLLDDDMTARVGDFGL 180
+A ++SA+ YL + H L N L+ ++ +V DFGL
Sbjct: 108 -------VNAVVLLYMATQISSAMEYLE---KKNFIHRDLAARNCLVGENHLVKVADFGL 157
Query: 181 ARFLPPTRTQTSSIDVKGSIGYIAPEYGVGNEVSTIGDVYSYGILLLEL 229
+R + T T+ K I + APE N+ S DV+++G+LL E+
Sbjct: 158 SRLMT-GDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEI 205
>pdb|2HZI|A Chain A, Abl Kinase Domain In Complex With Pd180970
pdb|2HZI|B Chain B, Abl Kinase Domain In Complex With Pd180970
pdb|3CS9|A Chain A, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|B Chain B, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|C Chain C, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|D Chain D, Human Abl Kinase In Complex With Nilotinib
Length = 277
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 44/169 (26%), Positives = 81/169 (47%), Gaps = 17/169 (10%)
Query: 61 KSFIAECKALRNIRHRNLIKVLTACLGVDYQGNDFKALVYEFMHNRSLKEWLYPISKEDE 120
+ F+ E ++ I+H NL+++L C + F ++ EFM +L ++L ++++
Sbjct: 58 EEFLKEAAVMKEIKHPNLVQLLGVCT----REPPF-YIITEFMTYGNLLDYLRECNRQE- 111
Query: 121 TYKRPXXXXXXXXXXIAIDVASALNYLHHDCQPVTAHCVLKPSNVLLDDDMTARVGDFGL 180
+A ++SA+ YL + H L N L+ ++ +V DFGL
Sbjct: 112 -------VNAVVLLYMATQISSAMEYLE---KKNFIHRDLAARNCLVGENHLVKVADFGL 161
Query: 181 ARFLPPTRTQTSSIDVKGSIGYIAPEYGVGNEVSTIGDVYSYGILLLEL 229
+R + T T+ K I + APE N+ S DV+++G+LL E+
Sbjct: 162 SRLMT-GDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEI 209
>pdb|2HYY|A Chain A, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|B Chain B, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|C Chain C, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|D Chain D, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HZ4|A Chain A, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
pdb|2HZ4|B Chain B, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
pdb|2HZ4|C Chain C, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
Length = 273
Score = 57.0 bits (136), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 44/169 (26%), Positives = 81/169 (47%), Gaps = 17/169 (10%)
Query: 61 KSFIAECKALRNIRHRNLIKVLTACLGVDYQGNDFKALVYEFMHNRSLKEWLYPISKEDE 120
+ F+ E ++ I+H NL+++L C + F ++ EFM +L ++L ++++
Sbjct: 54 EEFLKEAAVMKEIKHPNLVQLLGVCT----REPPF-YIITEFMTYGNLLDYLRECNRQE- 107
Query: 121 TYKRPXXXXXXXXXXIAIDVASALNYLHHDCQPVTAHCVLKPSNVLLDDDMTARVGDFGL 180
+A ++SA+ YL + H L N L+ ++ +V DFGL
Sbjct: 108 -------VNAVVLLYMATQISSAMEYLE---KKNFIHRDLAARNCLVGENHLVKVADFGL 157
Query: 181 ARFLPPTRTQTSSIDVKGSIGYIAPEYGVGNEVSTIGDVYSYGILLLEL 229
+R + T T+ K I + APE N+ S DV+++G+LL E+
Sbjct: 158 SRLMT-GDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEI 205
>pdb|3NAY|A Chain A, Pdk1 In Complex With Inhibitor Mp6
pdb|3NAY|B Chain B, Pdk1 In Complex With Inhibitor Mp6
Length = 311
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 37/139 (26%), Positives = 65/139 (46%), Gaps = 8/139 (5%)
Query: 139 DVASALNYLHHDCQPVTAHCVLKPSNVLLDDDMTARVGDFGLARFLPPTRTQTSSIDVKG 198
++ SAL YLH H LKP N+LL++DM ++ DFG A+ L P Q + G
Sbjct: 137 EIVSALEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVG 193
Query: 199 SIGYIAPEYGVGNEVSTIGDVYSYGILLLELM-----IREKPSDIMFEGDMNLHKFAKMA 253
+ Y++PE D+++ G ++ +L+ R ++F+ + L
Sbjct: 194 TAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYDFPEK 253
Query: 254 LSNHVKDIVDSILLNDDEK 272
+D+V+ +L+ D K
Sbjct: 254 FFPKARDLVEKLLVLDATK 272
>pdb|3DK3|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK3|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 293
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 44/169 (26%), Positives = 81/169 (47%), Gaps = 17/169 (10%)
Query: 61 KSFIAECKALRNIRHRNLIKVLTACLGVDYQGNDFKALVYEFMHNRSLKEWLYPISKEDE 120
+ F+ E ++ I+H NL+++L C + F ++ EFM +L ++L ++++
Sbjct: 52 EEFLKEAAVMKEIKHPNLVQLLGVCT----REPPF-YIITEFMTYGNLLDYLRECNRQE- 105
Query: 121 TYKRPXXXXXXXXXXIAIDVASALNYLHHDCQPVTAHCVLKPSNVLLDDDMTARVGDFGL 180
+A ++SA+ YL + H L N L+ ++ +V DFGL
Sbjct: 106 -------VSAVVLLYMATQISSAMEYLE---KKNFIHRDLAARNCLVGENHLVKVADFGL 155
Query: 181 ARFLPPTRTQTSSIDVKGSIGYIAPEYGVGNEVSTIGDVYSYGILLLEL 229
+R + T T+ K I + APE N+ S DV+++G+LL E+
Sbjct: 156 SRLMT-GDTFTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEI 203
>pdb|3ORX|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|B Chain B, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|C Chain C, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|D Chain D, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|E Chain E, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|F Chain F, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|G Chain G, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|H Chain H, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORZ|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|B Chain B, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|C Chain C, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|D Chain D, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3OTU|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator Js30
Length = 316
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 44/176 (25%), Positives = 76/176 (43%), Gaps = 18/176 (10%)
Query: 102 FMHNRSLKEWLYPISKEDETYKRPXXXXXXXXXXIAIDVASALNYLHHDCQPVTAHCVLK 161
+ N L +++ I DET R ++ SAL YLH H LK
Sbjct: 118 YAKNGELLKYIRKIGSFDETCTR----------FYTAEIVSALEYLHGKG---IIHRDLK 164
Query: 162 PSNVLLDDDMTARVGDFGLARFLPPTRTQTSSIDVKGSIGYIAPEYGVGNEVSTIGDVYS 221
P N+LL++DM ++ DFG A+ L P Q + G+ Y++PE D+++
Sbjct: 165 PENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSACKSSDLWA 224
Query: 222 YGILLLELM-----IREKPSDIMFEGDMNLHKFAKMALSNHVKDIVDSILLNDDEK 272
G ++ +L+ R ++F+ + L +D+V+ +L+ D K
Sbjct: 225 LGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYDFPEKFFPKARDLVEKLLVLDATK 280
>pdb|3RWP|A Chain A, Discovery Of A Novel, Potent And Selective Inhibitor Of 3-
Phosphoinositide Dependent Kinase (Pdk1)
Length = 311
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 44/176 (25%), Positives = 76/176 (43%), Gaps = 18/176 (10%)
Query: 102 FMHNRSLKEWLYPISKEDETYKRPXXXXXXXXXXIAIDVASALNYLHHDCQPVTAHCVLK 161
+ N L +++ I DET R ++ SAL YLH H LK
Sbjct: 113 YAKNGELLKYIRKIGSFDETCTR----------FYTAEIVSALEYLHGKG---IIHRDLK 159
Query: 162 PSNVLLDDDMTARVGDFGLARFLPPTRTQTSSIDVKGSIGYIAPEYGVGNEVSTIGDVYS 221
P N+LL++DM ++ DFG A+ L P Q + G+ Y++PE D+++
Sbjct: 160 PENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSACKSSDLWA 219
Query: 222 YGILLLELM-----IREKPSDIMFEGDMNLHKFAKMALSNHVKDIVDSILLNDDEK 272
G ++ +L+ R ++F+ + L +D+V+ +L+ D K
Sbjct: 220 LGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYDFPEKFFPKARDLVEKLLVLDATK 275
>pdb|3SC1|A Chain A, Novel Isoquinolone Pdk1 Inhibitors Discovered Through
Fragment-Based Lead Discovery
pdb|3RWQ|A Chain A, Discovery Of A Novel, Potent And Selective Inhibitor Of 3-
Phosphoinositide Dependent Kinase (Pdk1)
Length = 311
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 44/176 (25%), Positives = 76/176 (43%), Gaps = 18/176 (10%)
Query: 102 FMHNRSLKEWLYPISKEDETYKRPXXXXXXXXXXIAIDVASALNYLHHDCQPVTAHCVLK 161
+ N L +++ I DET R ++ SAL YLH H LK
Sbjct: 113 YAKNGELLKYIRKIGSFDETCTR----------FYTAEIVSALEYLHGKG---IIHRDLK 159
Query: 162 PSNVLLDDDMTARVGDFGLARFLPPTRTQTSSIDVKGSIGYIAPEYGVGNEVSTIGDVYS 221
P N+LL++DM ++ DFG A+ L P Q + G+ Y++PE D+++
Sbjct: 160 PENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSACKSSDLWA 219
Query: 222 YGILLLELM-----IREKPSDIMFEGDMNLHKFAKMALSNHVKDIVDSILLNDDEK 272
G ++ +L+ R ++F+ + L +D+V+ +L+ D K
Sbjct: 220 LGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYDFPEKFFPKARDLVEKLLVLDATK 275
>pdb|1UU3|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Ly333531
pdb|1UU7|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-2
pdb|1UU8|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-1
pdb|1OKY|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Staurosporine
pdb|1OKZ|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Ucn-01
Length = 310
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 44/176 (25%), Positives = 76/176 (43%), Gaps = 18/176 (10%)
Query: 102 FMHNRSLKEWLYPISKEDETYKRPXXXXXXXXXXIAIDVASALNYLHHDCQPVTAHCVLK 161
+ N L +++ I DET R ++ SAL YLH H LK
Sbjct: 111 YAKNGELLKYIRKIGSFDETCTR----------FYTAEIVSALEYLHGKG---IIHRDLK 157
Query: 162 PSNVLLDDDMTARVGDFGLARFLPPTRTQTSSIDVKGSIGYIAPEYGVGNEVSTIGDVYS 221
P N+LL++DM ++ DFG A+ L P Q + G+ Y++PE D+++
Sbjct: 158 PENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSACKSSDLWA 217
Query: 222 YGILLLELM-----IREKPSDIMFEGDMNLHKFAKMALSNHVKDIVDSILLNDDEK 272
G ++ +L+ R ++F+ + L +D+V+ +L+ D K
Sbjct: 218 LGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYDFPEKFFPKARDLVEKLLVLDATK 273
>pdb|3IOP|A Chain A, Pdk-1 In Complex With The Inhibitor Compound-8i
pdb|3QCQ|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-(3-
Amino-1h-Indazol-6-Yl)-N4-Ethyl-2,4-Pyrimidinediamine
pdb|3QCS|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-[2-
Amino-6-(4-Morpholinyl)-4-Pyrimidinyl]-1h-Indazol-3-
Amine
pdb|3QCX|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-{2-
Amino-6-[(3r)-3-Methyl-4-Morpholinyl]-4-Pyrimidinyl}-1h-
Indazol-3- Amine
pdb|3QCY|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 4-[2-
Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-Pyrimidinyl]-N-
Phenyl-2- Morpholinecarboxamide
pdb|3QD0|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With (2r,5s)-
1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-Pyrimidinyl]-6-
Methyl-N- Phenyl-3-Piperidinecarboxamide
pdb|3QD3|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 1,1- Dimethylethyl
{(3r,6s)-1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-
Pyrimidinyl]-6-Methyl-3-Piperidinyl}carbamate
pdb|3QD4|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 1,1-
Dimethylethyl{(3r,
5r)-1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-
Pyrimidinyl]-5-Methyl-3-Piperidinyl}carbamate
Length = 312
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 44/176 (25%), Positives = 76/176 (43%), Gaps = 18/176 (10%)
Query: 102 FMHNRSLKEWLYPISKEDETYKRPXXXXXXXXXXIAIDVASALNYLHHDCQPVTAHCVLK 161
+ N L +++ I DET R ++ SAL YLH H LK
Sbjct: 114 YAKNGELLKYIRKIGSFDETCTR----------FYTAEIVSALEYLHGKG---IIHRDLK 160
Query: 162 PSNVLLDDDMTARVGDFGLARFLPPTRTQTSSIDVKGSIGYIAPEYGVGNEVSTIGDVYS 221
P N+LL++DM ++ DFG A+ L P Q + G+ Y++PE D+++
Sbjct: 161 PENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSACKSSDLWA 220
Query: 222 YGILLLELM-----IREKPSDIMFEGDMNLHKFAKMALSNHVKDIVDSILLNDDEK 272
G ++ +L+ R ++F+ + L +D+V+ +L+ D K
Sbjct: 221 LGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYDFPEKFFPKARDLVEKLLVLDATK 276
>pdb|3H9O|A Chain A, Phosphoinositide-Dependent Protein Kinase 1 (Pdk-1) In
Complex With Compound 9
Length = 311
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 44/176 (25%), Positives = 76/176 (43%), Gaps = 18/176 (10%)
Query: 102 FMHNRSLKEWLYPISKEDETYKRPXXXXXXXXXXIAIDVASALNYLHHDCQPVTAHCVLK 161
+ N L +++ I DET R ++ SAL YLH H LK
Sbjct: 113 YAKNGELLKYIRKIGSFDETCTR----------FYTAEIVSALEYLHGKG---IIHRDLK 159
Query: 162 PSNVLLDDDMTARVGDFGLARFLPPTRTQTSSIDVKGSIGYIAPEYGVGNEVSTIGDVYS 221
P N+LL++DM ++ DFG A+ L P Q + G+ Y++PE D+++
Sbjct: 160 PENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSACKSSDLWA 219
Query: 222 YGILLLELM-----IREKPSDIMFEGDMNLHKFAKMALSNHVKDIVDSILLNDDEK 272
G ++ +L+ R ++F+ + L +D+V+ +L+ D K
Sbjct: 220 LGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYDFPEKFFPKARDLVEKLLVLDATK 275
>pdb|2BIY|A Chain A, Structure Of Pdk1-S241a Mutant Kinase Domain
Length = 310
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 44/176 (25%), Positives = 76/176 (43%), Gaps = 18/176 (10%)
Query: 102 FMHNRSLKEWLYPISKEDETYKRPXXXXXXXXXXIAIDVASALNYLHHDCQPVTAHCVLK 161
+ N L +++ I DET R ++ SAL YLH H LK
Sbjct: 111 YAKNGELLKYIRKIGSFDETCTR----------FYTAEIVSALEYLHGKG---IIHRDLK 157
Query: 162 PSNVLLDDDMTARVGDFGLARFLPPTRTQTSSIDVKGSIGYIAPEYGVGNEVSTIGDVYS 221
P N+LL++DM ++ DFG A+ L P Q + G+ Y++PE D+++
Sbjct: 158 PENILLNEDMHIQITDFGTAKVLSPESKQARANAFVGTAQYVSPELLTEKSACKSSDLWA 217
Query: 222 YGILLLELM-----IREKPSDIMFEGDMNLHKFAKMALSNHVKDIVDSILLNDDEK 272
G ++ +L+ R ++F+ + L +D+V+ +L+ D K
Sbjct: 218 LGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYDFPEKFFPKARDLVEKLLVLDATK 273
>pdb|2XCK|A Chain A, Crystal Structure Of Pdk1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 309
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 44/176 (25%), Positives = 76/176 (43%), Gaps = 18/176 (10%)
Query: 102 FMHNRSLKEWLYPISKEDETYKRPXXXXXXXXXXIAIDVASALNYLHHDCQPVTAHCVLK 161
+ N L +++ I DET R ++ SAL YLH H LK
Sbjct: 111 YAKNGELLKYIRKIGSFDETCTR----------FYTAEIVSALEYLHGKG---IIHRDLK 157
Query: 162 PSNVLLDDDMTARVGDFGLARFLPPTRTQTSSIDVKGSIGYIAPEYGVGNEVSTIGDVYS 221
P N+LL++DM ++ DFG A+ L P Q + G+ Y++PE D+++
Sbjct: 158 PENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSACKSSDLWA 217
Query: 222 YGILLLELM-----IREKPSDIMFEGDMNLHKFAKMALSNHVKDIVDSILLNDDEK 272
G ++ +L+ R ++F+ + L +D+V+ +L+ D K
Sbjct: 218 LGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYDFPEKFFPKARDLVEKLLVLDATK 273
>pdb|2XCH|A Chain A, Crystal Structure Of Pdk1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 309
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 44/176 (25%), Positives = 76/176 (43%), Gaps = 18/176 (10%)
Query: 102 FMHNRSLKEWLYPISKEDETYKRPXXXXXXXXXXIAIDVASALNYLHHDCQPVTAHCVLK 161
+ N L +++ I DET R ++ SAL YLH H LK
Sbjct: 111 YAKNGELLKYIRKIGSFDETCTR----------FYTAEIVSALEYLHGKG---IIHRDLK 157
Query: 162 PSNVLLDDDMTARVGDFGLARFLPPTRTQTSSIDVKGSIGYIAPEYGVGNEVSTIGDVYS 221
P N+LL++DM ++ DFG A+ L P Q + G+ Y++PE D+++
Sbjct: 158 PENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSACKSSDLWA 217
Query: 222 YGILLLELM-----IREKPSDIMFEGDMNLHKFAKMALSNHVKDIVDSILLNDDEK 272
G ++ +L+ R ++F+ + L +D+V+ +L+ D K
Sbjct: 218 LGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYDFPEKFFPKARDLVEKLLVLDATK 273
>pdb|3HRC|A Chain A, Crystal Structure Of A Mutant Of Human Pdk1 Kinase Domain
In Complex With Atp
pdb|3HRF|A Chain A, Crystal Structure Of Human Pdk1 Kinase Domain In Complex
With An Allosteric Activator Bound To The Pif-Pocket
pdb|3RCJ|A Chain A, Rapid Preparation Of Triazolyl Substituted Nh-Heterocyclic
Kinase Inhibitors Via One-Pot Sonogashira Coupling
Tms-Deprotection Cuaac Sequence
pdb|4A06|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Activator Ps114 Bound To The Pif-Pocket
pdb|4AW1|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Compound Ps210 Bound To The Pif-Pocket
Length = 311
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 44/176 (25%), Positives = 75/176 (42%), Gaps = 18/176 (10%)
Query: 102 FMHNRSLKEWLYPISKEDETYKRPXXXXXXXXXXIAIDVASALNYLHHDCQPVTAHCVLK 161
+ N L +++ I DET R ++ SAL YLH H LK
Sbjct: 113 YAKNGELLKYIRKIGSFDETCTR----------FYTAEIVSALEYLHGKG---IIHRDLK 159
Query: 162 PSNVLLDDDMTARVGDFGLARFLPPTRTQTSSIDVKGSIGYIAPEYGVGNEVSTIGDVYS 221
P N+LL++DM ++ DFG A+ L P Q + G+ Y++PE D+++
Sbjct: 160 PENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSACKSSDLWA 219
Query: 222 YGILLLELM-----IREKPSDIMFEGDMNLHKFAKMALSNHVKDIVDSILLNDDEK 272
G ++ +L+ R ++F + L +D+V+ +L+ D K
Sbjct: 220 LGCIIYQLVAGLPPFRAGNEGLIFAKIIKLEYDFPEKFFPKARDLVEKLLVLDATK 275
>pdb|4A07|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Activator Ps171 Bound To The Pif-Pocket
pdb|4AW0|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Compound Ps182 Bound To The Pif-Pocket
Length = 311
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 44/176 (25%), Positives = 75/176 (42%), Gaps = 18/176 (10%)
Query: 102 FMHNRSLKEWLYPISKEDETYKRPXXXXXXXXXXIAIDVASALNYLHHDCQPVTAHCVLK 161
+ N L +++ I DET R ++ SAL YLH H LK
Sbjct: 113 YAKNGELLKYIRKIGSFDETCTR----------FYTAEIVSALEYLHGKG---IIHRDLK 159
Query: 162 PSNVLLDDDMTARVGDFGLARFLPPTRTQTSSIDVKGSIGYIAPEYGVGNEVSTIGDVYS 221
P N+LL++DM ++ DFG A+ L P Q + G+ Y++PE D+++
Sbjct: 160 PENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSAXKSSDLWA 219
Query: 222 YGILLLELM-----IREKPSDIMFEGDMNLHKFAKMALSNHVKDIVDSILLNDDEK 272
G ++ +L+ R ++F + L +D+V+ +L+ D K
Sbjct: 220 LGCIIYQLVAGLPPFRAGNEGLIFAKIIKLEYDFPEKFFPKARDLVEKLLVLDATK 275
>pdb|1OPK|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
Length = 495
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 44/169 (26%), Positives = 81/169 (47%), Gaps = 17/169 (10%)
Query: 61 KSFIAECKALRNIRHRNLIKVLTACLGVDYQGNDFKALVYEFMHNRSLKEWLYPISKEDE 120
+ F+ E ++ I+H NL+++L C + F ++ EFM +L ++L ++++
Sbjct: 261 EEFLKEAAVMKEIKHPNLVQLLGVCT----REPPF-YIITEFMTYGNLLDYLRECNRQE- 314
Query: 121 TYKRPXXXXXXXXXXIAIDVASALNYLHHDCQPVTAHCVLKPSNVLLDDDMTARVGDFGL 180
+A ++SA+ YL + H L N L+ ++ +V DFGL
Sbjct: 315 -------VSAVVLLYMATQISSAMEYLE---KKNFIHRNLAARNCLVGENHLVKVADFGL 364
Query: 181 ARFLPPTRTQTSSIDVKGSIGYIAPEYGVGNEVSTIGDVYSYGILLLEL 229
+R + T T+ K I + APE N+ S DV+++G+LL E+
Sbjct: 365 SRLMT-GDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEI 412
>pdb|1OPL|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|1OPL|B Chain B, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
Length = 537
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 44/169 (26%), Positives = 81/169 (47%), Gaps = 17/169 (10%)
Query: 61 KSFIAECKALRNIRHRNLIKVLTACLGVDYQGNDFKALVYEFMHNRSLKEWLYPISKEDE 120
+ F+ E ++ I+H NL+++L C + F ++ EFM +L ++L ++++
Sbjct: 300 EEFLKEAAVMKEIKHPNLVQLLGVCT----REPPF-YIITEFMTYGNLLDYLRECNRQE- 353
Query: 121 TYKRPXXXXXXXXXXIAIDVASALNYLHHDCQPVTAHCVLKPSNVLLDDDMTARVGDFGL 180
+A ++SA+ YL + H L N L+ ++ +V DFGL
Sbjct: 354 -------VNAVVLLYMATQISSAMEYLE---KKNFIHRNLAARNCLVGENHLVKVADFGL 403
Query: 181 ARFLPPTRTQTSSIDVKGSIGYIAPEYGVGNEVSTIGDVYSYGILLLEL 229
+R + T T+ K I + APE N+ S DV+++G+LL E+
Sbjct: 404 SRLMT-GDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEI 451
>pdb|2FO0|A Chain A, Organization Of The Sh3-Sh2 Unit In Active And Inactive
Forms Of The C-Abl Tyrosine Kinase
Length = 495
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 44/169 (26%), Positives = 81/169 (47%), Gaps = 17/169 (10%)
Query: 61 KSFIAECKALRNIRHRNLIKVLTACLGVDYQGNDFKALVYEFMHNRSLKEWLYPISKEDE 120
+ F+ E ++ I+H NL+++L C + F ++ EFM +L ++L ++++
Sbjct: 258 EEFLKEAAVMKEIKHPNLVQLLGVCT----REPPF-YIITEFMTYGNLLDYLRECNRQE- 311
Query: 121 TYKRPXXXXXXXXXXIAIDVASALNYLHHDCQPVTAHCVLKPSNVLLDDDMTARVGDFGL 180
+A ++SA+ YL + H L N L+ ++ +V DFGL
Sbjct: 312 -------VNAVVLLYMATQISSAMEYLE---KKNFIHRNLAARNCLVGENHLVKVADFGL 361
Query: 181 ARFLPPTRTQTSSIDVKGSIGYIAPEYGVGNEVSTIGDVYSYGILLLEL 229
+R + T T+ K I + APE N+ S DV+++G+LL E+
Sbjct: 362 SRLMT-GDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEI 409
>pdb|3ORM|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain D76a Mutant
Length = 311
Score = 55.8 bits (133), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 35/106 (33%), Positives = 55/106 (51%), Gaps = 8/106 (7%)
Query: 139 DVASALNYLHHDCQPVTAHCVLKPSNVLLDDDMTARVGDFGLARFLPPT-RTQTSSIDVK 197
D ALN+ H + H +KP+N+++ +V DFG+AR + + + T + V
Sbjct: 124 DACQALNFSHQNG---IIHRDVKPANIMISATNAVKVMDFGIARAIADSGNSVTQTAAVI 180
Query: 198 GSIGYIAPEYGVGNEVSTIGDVYSYGILLLELMIREKPSDIMFEGD 243
G+ Y++PE G+ V DVYS G +L E++ E P F GD
Sbjct: 181 GTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPP----FTGD 222
>pdb|3ORI|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|B Chain B, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|C Chain C, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|D Chain D, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORK|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 2)
pdb|3ORL|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 3)
pdb|3ORO|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 4)
pdb|3ORP|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 5)
pdb|3ORT|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 6)
Length = 311
Score = 55.8 bits (133), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 35/106 (33%), Positives = 55/106 (51%), Gaps = 8/106 (7%)
Query: 139 DVASALNYLHHDCQPVTAHCVLKPSNVLLDDDMTARVGDFGLARFLPPT-RTQTSSIDVK 197
D ALN+ H + H +KP+N+++ +V DFG+AR + + + T + V
Sbjct: 124 DACQALNFSHQNG---IIHRDVKPANIMISATNAVKVMDFGIARAIADSGNSVTQTAAVI 180
Query: 198 GSIGYIAPEYGVGNEVSTIGDVYSYGILLLELMIREKPSDIMFEGD 243
G+ Y++PE G+ V DVYS G +L E++ E P F GD
Sbjct: 181 GTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPP----FTGD 222
>pdb|1MRU|A Chain A, Intracellular SerTHR PROTEIN KINASE DOMAIN OF
Mycobacterium Tuberculosis Pknb.
pdb|1MRU|B Chain B, Intracellular SerTHR PROTEIN KINASE DOMAIN OF
Mycobacterium Tuberculosis Pknb
Length = 311
Score = 55.8 bits (133), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 35/106 (33%), Positives = 55/106 (51%), Gaps = 8/106 (7%)
Query: 139 DVASALNYLHHDCQPVTAHCVLKPSNVLLDDDMTARVGDFGLARFLPPT-RTQTSSIDVK 197
D ALN+ H + H +KP+N+++ +V DFG+AR + + + T + V
Sbjct: 124 DACQALNFSHQNG---IIHRDVKPANIMISATNAVKVMDFGIARAIADSGNSVTQTAAVI 180
Query: 198 GSIGYIAPEYGVGNEVSTIGDVYSYGILLLELMIREKPSDIMFEGD 243
G+ Y++PE G+ V DVYS G +L E++ E P F GD
Sbjct: 181 GTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPP----FTGD 222
>pdb|3F61|A Chain A, Crystal Structure Of M. Tuberculosis Pknb
Leu33aspVAL222ASP DOUBLE MUTANT IN COMPLEX WITH ADP
Length = 311
Score = 55.8 bits (133), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 37/108 (34%), Positives = 57/108 (52%), Gaps = 12/108 (11%)
Query: 139 DVASALNYLHHDCQPVTAHCVLKPSNVLLDDDMTARVGDFGLARFLPPTR---TQTSSID 195
D ALN+ H + H +KP+N+++ +V DFG+AR + + TQT++
Sbjct: 124 DACQALNFSHQNG---IIHRDVKPANIMISATNAVKVMDFGIARAIADSGNSVTQTAA-- 178
Query: 196 VKGSIGYIAPEYGVGNEVSTIGDVYSYGILLLELMIREKPSDIMFEGD 243
V G+ Y++PE G+ V DVYS G +L E++ E P F GD
Sbjct: 179 VIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPP----FTGD 222
>pdb|1O6Y|A Chain A, Catalytic Domain Of Pknb Kinase From Mycobacterium
Tuberculosis
pdb|2FUM|A Chain A, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|B Chain B, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|C Chain C, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|D Chain D, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
Length = 299
Score = 55.8 bits (133), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 35/106 (33%), Positives = 55/106 (51%), Gaps = 8/106 (7%)
Query: 139 DVASALNYLHHDCQPVTAHCVLKPSNVLLDDDMTARVGDFGLARFLPPT-RTQTSSIDVK 197
D ALN+ H + H +KP+N+++ +V DFG+AR + + + T + V
Sbjct: 141 DACQALNFSHQNG---IIHRDVKPANIMISATNAVKVMDFGIARAIADSGNSVTQTAAVI 197
Query: 198 GSIGYIAPEYGVGNEVSTIGDVYSYGILLLELMIREKPSDIMFEGD 243
G+ Y++PE G+ V DVYS G +L E++ E P F GD
Sbjct: 198 GTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPP----FTGD 239
>pdb|2JED|A Chain A, The Crystal Structure Of The Kinase Domain Of The Protein
Kinase C Theta In Complex With Nvp-Xaa228 At 2.32a
Resolution.
pdb|2JED|B Chain B, The Crystal Structure Of The Kinase Domain Of The Protein
Kinase C Theta In Complex With Nvp-Xaa228 At 2.32a
Resolution
Length = 352
Score = 55.5 bits (132), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 44/153 (28%), Positives = 74/153 (48%), Gaps = 15/153 (9%)
Query: 137 AIDVASALNYLHHDCQPVTAHCVLKPSNVLLDDDMTARVGDFGLAR--FLPPTRTQTSSI 194
A ++ L +LH + LK N+LLD D ++ DFG+ + L +T
Sbjct: 125 AAEIILGLQFLHSKG---IVYRDLKLDNILLDKDGHIKIADFGMCKENMLGDAKTN---- 177
Query: 195 DVKGSIGYIAPEYGVGNEVSTIGDVYSYGILLLELMIREKP-----SDIMFEGDMNLHKF 249
+ G+ YIAPE +G + + D +S+G+LL E++I + P + +F + F
Sbjct: 178 EFCGTPDYIAPEILLGQKYNHSVDWWSFGVLLYEMLIGQSPFHGQDEEELFHSIRMDNPF 237
Query: 250 AKMALSNHVKDIVDSILLNDDEK-LVVRGDQKQ 281
L KD++ + + + EK L VRGD +Q
Sbjct: 238 YPRWLEKEAKDLLVKLFVREPEKRLGVRGDIRQ 270
>pdb|1XJD|A Chain A, Crystal Structure Of Pkc-Theta Complexed With
Staurosporine At 2a Resolution
Length = 345
Score = 55.1 bits (131), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 44/153 (28%), Positives = 73/153 (47%), Gaps = 15/153 (9%)
Query: 137 AIDVASALNYLHHDCQPVTAHCVLKPSNVLLDDDMTARVGDFGLAR--FLPPTRTQTSSI 194
A ++ L +LH + LK N+LLD D ++ DFG+ + L +T
Sbjct: 124 AAEIILGLQFLHSKG---IVYRDLKLDNILLDKDGHIKIADFGMCKENMLGDAKTNXFC- 179
Query: 195 DVKGSIGYIAPEYGVGNEVSTIGDVYSYGILLLELMIREKP-----SDIMFEGDMNLHKF 249
G+ YIAPE +G + + D +S+G+LL E++I + P + +F + F
Sbjct: 180 ---GTPDYIAPEILLGQKYNHSVDWWSFGVLLYEMLIGQSPFHGQDEEELFHSIRMDNPF 236
Query: 250 AKMALSNHVKDIVDSILLNDDEK-LVVRGDQKQ 281
L KD++ + + + EK L VRGD +Q
Sbjct: 237 YPRWLEKEAKDLLVKLFVREPEKRLGVRGDIRQ 269
>pdb|2B7A|A Chain A, The Structural Basis Of Janus Kinase 2 Inhibition By A
Potent And Specific Pan-Janus Kinase Inhibitor
pdb|2B7A|B Chain B, The Structural Basis Of Janus Kinase 2 Inhibition By A
Potent And Specific Pan-Janus Kinase Inhibitor
pdb|3FUP|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
pdb|3FUP|B Chain B, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
Length = 293
Score = 55.1 bits (131), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 43/186 (23%), Positives = 80/186 (43%), Gaps = 21/186 (11%)
Query: 60 FKSFIAECKALRNIRHRNLIKVLTACLGVDYQGNDFKALVYEFMHNRSLKEWLYPISKED 119
+ F E + L++++H N++K C G L+ E++ SL+++L K
Sbjct: 53 LRDFEREIEILKSLQHDNIVKYKGVCYSA---GRRNLKLIMEYLPYGSLRDYL---QKHK 106
Query: 120 ETYKRPXXXXXXXXXXIAIDVASALNYLHHDCQPVTAHCVLKPSNVLLDDDMTARVGDFG 179
E ++ Y+H D L N+L++++ ++GDFG
Sbjct: 107 ERIDHIKLLQYTSQICKGMEYLGTKRYIHRD---------LATRNILVENENRVKIGDFG 157
Query: 180 LARFLPPTRTQTSSIDVKGS-IGYIAPEYGVGNEVSTIGDVYSYGILLLELMI-----RE 233
L + LP + + S I + APE ++ S DV+S+G++L EL +
Sbjct: 158 LTKVLPQDKEXXKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYIEKSKS 217
Query: 234 KPSDIM 239
P++ M
Sbjct: 218 PPAEFM 223
>pdb|2Y7J|A Chain A, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|B Chain B, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|C Chain C, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|D Chain D, Structure Of Human Phosphorylase Kinase, Gamma 2
Length = 365
Score = 55.1 bits (131), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 53/201 (26%), Positives = 84/201 (41%), Gaps = 39/201 (19%)
Query: 90 YQGNDFKALVYEFMHNRSLKEWLYPISKEDETYKRPXXXXXXXXXXIAIDVASALNYLHH 149
Y+ + F LV++ M L ++L E R I + A+++LH
Sbjct: 169 YESSSFMFLVFDLMRKGELFDYLTEKVALSEKETR----------SIMRSLLEAVSFLHA 218
Query: 150 DCQPVTAHCVLKPSNVLLDDDMTARVGDFGLARFLPPTRTQTSSIDVKGSIGYIAPEY-- 207
+ H LKP N+LLDD+M R+ DFG + L P ++ G+ GY+APE
Sbjct: 219 NN---IVHRDLKPENILLDDNMQIRLSDFGFSCHLEPGEKLR---ELCGTPGYLAPEILK 272
Query: 208 --------GVGNEVSTIGDVYSYGILLLELMIREKPS---------DIMFEGDMNLHKFA 250
G G EV D+++ G++L L+ P ++ EG
Sbjct: 273 CSMDETHPGYGKEV----DLWACGVILFTLLAGSPPFWHRRQILMLRMIMEGQYQFSSPE 328
Query: 251 KMALSNHVKDIVDSILLNDDE 271
S+ VKD++ +L D E
Sbjct: 329 WDDRSSTVKDLISRLLQVDPE 349
>pdb|3JY9|A Chain A, Janus Kinase 2 Inhibitors
Length = 311
Score = 55.1 bits (131), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 43/186 (23%), Positives = 80/186 (43%), Gaps = 21/186 (11%)
Query: 60 FKSFIAECKALRNIRHRNLIKVLTACLGVDYQGNDFKALVYEFMHNRSLKEWLYPISKED 119
+ F E + L++++H N++K C G L+ E++ SL+++L K
Sbjct: 73 LRDFEREIEILKSLQHDNIVKYKGVCYSA---GRRNLKLIMEYLPYGSLRDYL---QKHK 126
Query: 120 ETYKRPXXXXXXXXXXIAIDVASALNYLHHDCQPVTAHCVLKPSNVLLDDDMTARVGDFG 179
E ++ Y+H D L N+L++++ ++GDFG
Sbjct: 127 ERIDHIKLLQYTSQICKGMEYLGTKRYIHRD---------LATRNILVENENRVKIGDFG 177
Query: 180 LARFLPPTRTQTSSIDVKGS-IGYIAPEYGVGNEVSTIGDVYSYGILLLELMI-----RE 233
L + LP + + S I + APE ++ S DV+S+G++L EL +
Sbjct: 178 LTKVLPQDKEXXKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYIEKSKS 237
Query: 234 KPSDIM 239
P++ M
Sbjct: 238 PPAEFM 243
>pdb|3K54|A Chain A, Structures Of Human Bruton's Tyrosine Kinase In Active And
Inactive Conformations Suggests A Mechanism Of
Activation For Tec Family Kinases
Length = 283
Score = 55.1 bits (131), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 48/196 (24%), Positives = 85/196 (43%), Gaps = 27/196 (13%)
Query: 63 FIAECKALRNIRHRNLIKVLTACLGVDYQGNDFKALVYEFMHNRSLKEWLYPISKEDETY 122
FI E K + N+ H L+++ C Q F ++ E+M N L +L + +T
Sbjct: 66 FIEEAKVMMNLSHEKLVQLYGVCTK---QRPIF--IITEYMANGCLLNYLREMRHRFQTQ 120
Query: 123 KRPXXXXXXXXXXIAIDVASALNYLHHDCQPVTAHCVLKPSNVLLDDDMTARVGDFGLAR 182
+ + DV A+ YL H L N L++D +V DFGL+R
Sbjct: 121 Q---------LLEMCKDVCEAMEYLE---SKQFLHRDLAARNCLVNDQGVVKVSDFGLSR 168
Query: 183 FLPPTRTQTSSIDVKGSIGYIAPEYGVGNEVSTIGDVYSYGILLLELMIREKPSDIMFEG 242
++ +TSS+ K + + PE + ++ S+ D++++G+L+ E I G
Sbjct: 169 YVLDDE-ETSSVGSKFPVRWSPPEVLMYSKFSSKSDIWAFGVLMWE---------IYSLG 218
Query: 243 DMNLHKFAKMALSNHV 258
M +F + H+
Sbjct: 219 KMPYERFTNSETAEHI 234
>pdb|2ZM1|A Chain A, Crystal Structure Of Imidazo Pyrazin 1 Bound To The Kinase
Domain Of Human Lck, (Auto-Phosphorylated On Tyr394)
pdb|2ZM4|A Chain A, Crystal Structure Of Imidazo Quinoxaline 1 Bound To The
Kinase Domain Of Human Lck, Activated Form (Auto-
Phosphorylated On Tyr394)
pdb|2ZYB|A Chain A, Crystal Structure Of Phenylimidazo Pyrazin 2 Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AC1|A Chain A, Crystal Structure Of Pyrazin Derivative Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AC2|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC3|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC4|A Chain A, Crystal Structure Of Triazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC5|A Chain A, Crystal Structure Of Triazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC8|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3ACJ|A Chain A, Crystal Structure Of Imidazo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3ACK|A Chain A, Crystal Structure Of Pyrrolo Pyrazine Derivative Bound To
The Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AD4|A Chain A, Crystal Structure Of Methoxy Benzofuran Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AD5|A Chain A, Crystal Structure Of Triazolone Derivative Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AD6|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
Length = 285
Score = 55.1 bits (131), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 46/179 (25%), Positives = 82/179 (45%), Gaps = 24/179 (13%)
Query: 56 RQGAFK--SFIAECKALRNIRHRNLIKVLTACLGVDYQGNDFKALVYEFMHNRSLKEWLY 113
+QG+ +F+AE ++ ++H+ L+++ + ++ E+M N SL ++L
Sbjct: 52 KQGSMSPDAFLAEANLMKQLQHQRLVRLYAVVT------QEPIYIITEYMENGSLVDFL- 104
Query: 114 PISKEDETYKRPXXXXXXXXXXIAIDVA--SALNYLHHDCQPVTAHCVLKPSNVLLDDDM 171
K K IA +A NY+H D L+ +N+L+ D +
Sbjct: 105 ---KTPSGIKLTINKLLDMAAQIAEGMAFIEERNYIHRD---------LRAANILVSDTL 152
Query: 172 TARVGDFGLARFLPPTRTQTSSIDVKGSIGYIAPEYGVGNEVSTIGDVYSYGILLLELM 230
+ ++ DFGLAR + T+ K I + APE + DV+S+GILL E++
Sbjct: 153 SCKIADFGLARLIEDNEX-TAREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIV 210
>pdb|3E62|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
pdb|3E63|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
pdb|3E64|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
Length = 293
Score = 55.1 bits (131), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 43/186 (23%), Positives = 80/186 (43%), Gaps = 21/186 (11%)
Query: 60 FKSFIAECKALRNIRHRNLIKVLTACLGVDYQGNDFKALVYEFMHNRSLKEWLYPISKED 119
+ F E + L++++H N++K C G L+ E++ SL+++L K
Sbjct: 54 LRDFEREIEILKSLQHDNIVKYKGVCYSA---GRRNLKLIMEYLPYGSLRDYL---QKHK 107
Query: 120 ETYKRPXXXXXXXXXXIAIDVASALNYLHHDCQPVTAHCVLKPSNVLLDDDMTARVGDFG 179
E ++ Y+H D L N+L++++ ++GDFG
Sbjct: 108 ERIDHIKLLQYTSQICKGMEYLGTKRYIHRD---------LATRNILVENENRVKIGDFG 158
Query: 180 LARFLPPTRTQTSSIDVKGS-IGYIAPEYGVGNEVSTIGDVYSYGILLLELMI-----RE 233
L + LP + + S I + APE ++ S DV+S+G++L EL +
Sbjct: 159 LTKVLPQDKEXXKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYIEKSKS 218
Query: 234 KPSDIM 239
P++ M
Sbjct: 219 PPAEFM 224
>pdb|3LPB|A Chain A, Crystal Structure Of Jak2 Complexed With A Potent
2,8-Diaryl Quinoxaline Inhibitor
pdb|3LPB|B Chain B, Crystal Structure Of Jak2 Complexed With A Potent
2,8-Diaryl Quinoxaline Inhibitor
pdb|3KRR|A Chain A, Crystal Structure Of Jak2 Complexed With A Potent
Quinoxaline Atp Site Inhibitor
Length = 295
Score = 55.1 bits (131), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 43/186 (23%), Positives = 80/186 (43%), Gaps = 21/186 (11%)
Query: 60 FKSFIAECKALRNIRHRNLIKVLTACLGVDYQGNDFKALVYEFMHNRSLKEWLYPISKED 119
+ F E + L++++H N++K C G L+ E++ SL+++L K
Sbjct: 55 LRDFEREIEILKSLQHDNIVKYKGVCYSA---GRRNLKLIMEYLPYGSLRDYL---QKHK 108
Query: 120 ETYKRPXXXXXXXXXXIAIDVASALNYLHHDCQPVTAHCVLKPSNVLLDDDMTARVGDFG 179
E ++ Y+H D L N+L++++ ++GDFG
Sbjct: 109 ERIDHIKLLQYTSQICKGMEYLGTKRYIHRD---------LATRNILVENENRVKIGDFG 159
Query: 180 LARFLPPTRTQTSSIDVKGS-IGYIAPEYGVGNEVSTIGDVYSYGILLLELMI-----RE 233
L + LP + + S I + APE ++ S DV+S+G++L EL +
Sbjct: 160 LTKVLPQDKEXXKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYIEKSKS 219
Query: 234 KPSDIM 239
P++ M
Sbjct: 220 PPAEFM 225
>pdb|3Q32|A Chain A, Structure Of Janus Kinase 2 With A Pyrrolotriazine
Inhibitor
pdb|3Q32|B Chain B, Structure Of Janus Kinase 2 With A Pyrrolotriazine
Inhibitor
Length = 301
Score = 55.1 bits (131), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 43/186 (23%), Positives = 80/186 (43%), Gaps = 21/186 (11%)
Query: 60 FKSFIAECKALRNIRHRNLIKVLTACLGVDYQGNDFKALVYEFMHNRSLKEWLYPISKED 119
+ F E + L++++H N++K C G L+ E++ SL+++L K
Sbjct: 55 LRDFEREIEILKSLQHDNIVKYKGVCYSA---GRRNLKLIMEYLPYGSLRDYL---QKHK 108
Query: 120 ETYKRPXXXXXXXXXXIAIDVASALNYLHHDCQPVTAHCVLKPSNVLLDDDMTARVGDFG 179
E ++ Y+H D L N+L++++ ++GDFG
Sbjct: 109 ERIDHIKLLQYTSQICKGMEYLGTKRYIHRD---------LATRNILVENENRVKIGDFG 159
Query: 180 LARFLPPTRTQTSSIDVKGS-IGYIAPEYGVGNEVSTIGDVYSYGILLLELMI-----RE 233
L + LP + + S I + APE ++ S DV+S+G++L EL +
Sbjct: 160 LTKVLPQDKEXXKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYIEKSKS 219
Query: 234 KPSDIM 239
P++ M
Sbjct: 220 PPAEFM 225
>pdb|3KXZ|A Chain A, The Complex Crystal Structure Of Lck With A Probe Molecule
W259
Length = 287
Score = 55.1 bits (131), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 46/179 (25%), Positives = 82/179 (45%), Gaps = 24/179 (13%)
Query: 56 RQGAFK--SFIAECKALRNIRHRNLIKVLTACLGVDYQGNDFKALVYEFMHNRSLKEWLY 113
+QG+ +F+AE ++ ++H+ L+++ + ++ E+M N SL ++L
Sbjct: 54 KQGSMSPDAFLAEANLMKQLQHQRLVRLYAVVT------QEPIYIITEYMENGSLVDFL- 106
Query: 114 PISKEDETYKRPXXXXXXXXXXIAIDVA--SALNYLHHDCQPVTAHCVLKPSNVLLDDDM 171
K K IA +A NY+H D L+ +N+L+ D +
Sbjct: 107 ---KTPSGIKLTINKLLDMAAQIAEGMAFIEERNYIHRD---------LRAANILVSDTL 154
Query: 172 TARVGDFGLARFLPPTRTQTSSIDVKGSIGYIAPEYGVGNEVSTIGDVYSYGILLLELM 230
+ ++ DFGLAR + T+ K I + APE + DV+S+GILL E++
Sbjct: 155 SCKIADFGLARLIEDNEX-TAREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIV 212
>pdb|1QPD|A Chain A, Structural Analysis Of The Lymphocyte-specific Kinase Lck
In Complex With Non-selective And Src Family Selective
Kinase Inhibitors
Length = 279
Score = 55.1 bits (131), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 46/179 (25%), Positives = 82/179 (45%), Gaps = 24/179 (13%)
Query: 56 RQGAFK--SFIAECKALRNIRHRNLIKVLTACLGVDYQGNDFKALVYEFMHNRSLKEWLY 113
+QG+ +F+AE ++ ++H+ L+++ + ++ E+M N SL ++L
Sbjct: 46 KQGSMSPDAFLAEANLMKQLQHQRLVRLYAVVT------QEPIYIITEYMENGSLVDFL- 98
Query: 114 PISKEDETYKRPXXXXXXXXXXIAIDVA--SALNYLHHDCQPVTAHCVLKPSNVLLDDDM 171
K K IA +A NY+H D L+ +N+L+ D +
Sbjct: 99 ---KTPSGIKLTINKLLDMAAQIAEGMAFIEERNYIHRD---------LRAANILVSDTL 146
Query: 172 TARVGDFGLARFLPPTRTQTSSIDVKGSIGYIAPEYGVGNEVSTIGDVYSYGILLLELM 230
+ ++ DFGLAR + T+ K I + APE + DV+S+GILL E++
Sbjct: 147 SCKIADFGLARLIEDAEX-TAREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIV 204
>pdb|3RVG|A Chain A, Crystals Structure Of Jak2 With A
1-Amino-5h-Pyrido[4,3-B]indol-4- Carboxamide Inhibitor
Length = 303
Score = 54.7 bits (130), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 43/186 (23%), Positives = 80/186 (43%), Gaps = 21/186 (11%)
Query: 60 FKSFIAECKALRNIRHRNLIKVLTACLGVDYQGNDFKALVYEFMHNRSLKEWLYPISKED 119
+ F E + L++++H N++K C G L+ E++ SL+++L K
Sbjct: 59 LRDFEREIEILKSLQHDNIVKYKGVCYSA---GRRNLKLIMEYLPYGSLRDYL---QKHK 112
Query: 120 ETYKRPXXXXXXXXXXIAIDVASALNYLHHDCQPVTAHCVLKPSNVLLDDDMTARVGDFG 179
E ++ Y+H D L N+L++++ ++GDFG
Sbjct: 113 ERIDHIKLLQYTSQICKGMEYLGTKRYIHRD---------LATRNILVENENRVKIGDFG 163
Query: 180 LARFLPPTRTQTSSIDVKGS-IGYIAPEYGVGNEVSTIGDVYSYGILLLELMI-----RE 233
L + LP + + S I + APE ++ S DV+S+G++L EL +
Sbjct: 164 LTKVLPQDKEXXKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYIEKSKS 223
Query: 234 KPSDIM 239
P++ M
Sbjct: 224 PPAEFM 229
>pdb|2W1I|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1I|B Chain B, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 326
Score = 54.7 bits (130), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 43/186 (23%), Positives = 80/186 (43%), Gaps = 21/186 (11%)
Query: 60 FKSFIAECKALRNIRHRNLIKVLTACLGVDYQGNDFKALVYEFMHNRSLKEWLYPISKED 119
+ F E + L++++H N++K C G L+ E++ SL+++L K
Sbjct: 86 LRDFEREIEILKSLQHDNIVKYKGVCYSA---GRRNLKLIMEYLPYGSLRDYL---QKHK 139
Query: 120 ETYKRPXXXXXXXXXXIAIDVASALNYLHHDCQPVTAHCVLKPSNVLLDDDMTARVGDFG 179
E ++ Y+H D L N+L++++ ++GDFG
Sbjct: 140 ERIDHIKLLQYTSQICKGMEYLGTKRYIHRD---------LATRNILVENENRVKIGDFG 190
Query: 180 LARFLPPTRTQTSSIDVKGS-IGYIAPEYGVGNEVSTIGDVYSYGILLLELMI-----RE 233
L + LP + + S I + APE ++ S DV+S+G++L EL +
Sbjct: 191 LTKVLPQDKEXXKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYIEKSKS 250
Query: 234 KPSDIM 239
P++ M
Sbjct: 251 PPAEFM 256
>pdb|4HGE|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 8
pdb|4HGE|B Chain B, Jak2 Kinase (Jh1 Domain) In Complex With Compound 8
Length = 300
Score = 54.7 bits (130), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 43/186 (23%), Positives = 80/186 (43%), Gaps = 21/186 (11%)
Query: 60 FKSFIAECKALRNIRHRNLIKVLTACLGVDYQGNDFKALVYEFMHNRSLKEWLYPISKED 119
+ F E + L++++H N++K C G L+ E++ SL+++L K
Sbjct: 60 LRDFEREIEILKSLQHDNIVKYKGVCYSA---GRRNLKLIMEYLPYGSLRDYL---QKHK 113
Query: 120 ETYKRPXXXXXXXXXXIAIDVASALNYLHHDCQPVTAHCVLKPSNVLLDDDMTARVGDFG 179
E ++ Y+H D L N+L++++ ++GDFG
Sbjct: 114 ERIDHIKLLQYTSQICKGMEYLGTKRYIHRD---------LATRNILVENENRVKIGDFG 164
Query: 180 LARFLPPTRTQTSSIDVKGS-IGYIAPEYGVGNEVSTIGDVYSYGILLLELMI-----RE 233
L + LP + + S I + APE ++ S DV+S+G++L EL +
Sbjct: 165 LTKVLPQDKEXXKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYIEKSKS 224
Query: 234 KPSDIM 239
P++ M
Sbjct: 225 PPAEFM 230
>pdb|3IO7|A Chain A, 2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Selective
Inhibitors Of Jak2
pdb|3IOK|A Chain A, 2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Selective
Inhibitors Of Jak2
pdb|3KCK|A Chain A, A Novel Chemotype Of Kinase Inhibitors
Length = 313
Score = 54.7 bits (130), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 43/186 (23%), Positives = 80/186 (43%), Gaps = 21/186 (11%)
Query: 60 FKSFIAECKALRNIRHRNLIKVLTACLGVDYQGNDFKALVYEFMHNRSLKEWLYPISKED 119
+ F E + L++++H N++K C G L+ E++ SL+++L K
Sbjct: 73 LRDFEREIEILKSLQHDNIVKYKGVCYSA---GRRNLKLIMEYLPYGSLRDYL---QKHK 126
Query: 120 ETYKRPXXXXXXXXXXIAIDVASALNYLHHDCQPVTAHCVLKPSNVLLDDDMTARVGDFG 179
E ++ Y+H D L N+L++++ ++GDFG
Sbjct: 127 ERIDHIKLLQYTSQICKGMEYLGTKRYIHRD---------LATRNILVENENRVKIGDFG 177
Query: 180 LARFLPPTRTQTSSIDVKGS-IGYIAPEYGVGNEVSTIGDVYSYGILLLELMI-----RE 233
L + LP + + S I + APE ++ S DV+S+G++L EL +
Sbjct: 178 LTKVLPQDKEXXKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYIEKSKS 237
Query: 234 KPSDIM 239
P++ M
Sbjct: 238 PPAEFM 243
>pdb|3KMM|A Chain A, Structure Of Human Lck Kinase With A Small Molecule
Inhibitor
Length = 288
Score = 54.7 bits (130), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 46/179 (25%), Positives = 82/179 (45%), Gaps = 24/179 (13%)
Query: 56 RQGAFK--SFIAECKALRNIRHRNLIKVLTACLGVDYQGNDFKALVYEFMHNRSLKEWLY 113
+QG+ +F+AE ++ ++H+ L+++ + ++ E+M N SL ++L
Sbjct: 55 KQGSMSPDAFLAEANLMKQLQHQRLVRLYAVVT------QEPIYIITEYMENGSLVDFL- 107
Query: 114 PISKEDETYKRPXXXXXXXXXXIAIDVA--SALNYLHHDCQPVTAHCVLKPSNVLLDDDM 171
K K IA +A NY+H D L+ +N+L+ D +
Sbjct: 108 ---KTPSGIKLTINKLLDMAAQIAEGMAFIEERNYIHRD---------LRAANILVSDTL 155
Query: 172 TARVGDFGLARFLPPTRTQTSSIDVKGSIGYIAPEYGVGNEVSTIGDVYSYGILLLELM 230
+ ++ DFGLAR + T+ K I + APE + DV+S+GILL E++
Sbjct: 156 SCKIADFGLARLIEDNEX-TAREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIV 213
>pdb|3LCK|A Chain A, The Kinase Domain Of Human Lymphocyte Kinase (Lck),
Activated Form (Auto-Phosphorylated On Tyr394)
pdb|3BYO|A Chain A, X-Ray Co-Crystal Structure Of 2-Amino-6-Phenylpyrimido[5',
4':5,6]pyrimido[1,2-A]benzimidazol-5(6h)-One 25 Bound To
Lck
Length = 271
Score = 54.7 bits (130), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 44/177 (24%), Positives = 81/177 (45%), Gaps = 20/177 (11%)
Query: 56 RQGAFK--SFIAECKALRNIRHRNLIKVLTACLGVDYQGNDFKALVYEFMHNRSLKEWLY 113
+QG+ +F+AE ++ ++H+ L+++ + ++ E+M N SL ++L
Sbjct: 46 KQGSMSPDAFLAEANLMKQLQHQRLVRLYAVVT------QEPIYIITEYMENGSLVDFLK 99
Query: 114 PISKEDETYKRPXXXXXXXXXXIAIDVASALNYLHHDCQPVTAHCVLKPSNVLLDDDMTA 173
S T + +A NY+H D L+ +N+L+ D ++
Sbjct: 100 TPSGIKLTINKLLDMAAQIAEGMAF--IEERNYIHRD---------LRAANILVSDTLSC 148
Query: 174 RVGDFGLARFLPPTRTQTSSIDVKGSIGYIAPEYGVGNEVSTIGDVYSYGILLLELM 230
++ DFGLAR + T+ K I + APE + DV+S+GILL E++
Sbjct: 149 KIADFGLARLIEDNEX-TAREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIV 204
>pdb|1UA2|A Chain A, Crystal Structure Of Human Cdk7
pdb|1UA2|B Chain B, Crystal Structure Of Human Cdk7
pdb|1UA2|C Chain C, Crystal Structure Of Human Cdk7
pdb|1UA2|D Chain D, Crystal Structure Of Human Cdk7
Length = 346
Score = 54.7 bits (130), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 54/199 (27%), Positives = 91/199 (45%), Gaps = 27/199 (13%)
Query: 56 RQGAFKSFIAECKALRNIRHRNLIKVLTACLGVDYQGNDFKALVYEFMHNRSLKEWLYPI 115
+ G ++ + E K L+ + H N+I +L A ++ N +LV++FM L I
Sbjct: 52 KDGINRTALREIKLLQELSHPNIIGLLDA---FGHKSN--ISLVFDFMETD-----LEVI 101
Query: 116 SKEDETYKRPXXXXXXXXXXIAIDVASALNYLHHDCQPVTAHCVLKPSNVLLDDDMTARV 175
K++ P + L YLH Q H LKP+N+LLD++ ++
Sbjct: 102 IKDNSLVLTPSHIKAYMLMTL-----QGLEYLH---QHWILHRDLKPNNLLLDENGVLKL 153
Query: 176 GDFGLAR-FLPPTRTQTSSIDVKGSIGYIAPEYGVGNEVSTIG-DVYSYGILLLELMIRE 233
DFGLA+ F P R + + Y APE G + +G D+++ G +L EL++R
Sbjct: 154 ADFGLAKSFGSPNRAYXHQVVTR---WYRAPELLFGARMYGVGVDMWAVGCILAELLLRV 210
Query: 234 KPSDIMFEGDMNLHKFAKM 252
GD +L + ++
Sbjct: 211 P----FLPGDSDLDQLTRI 225
>pdb|4E4M|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|B Chain B, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|D Chain D, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|E Chain E, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4F08|A Chain A, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
pdb|4F08|B Chain B, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
pdb|4F09|A Chain A, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
Length = 302
Score = 54.7 bits (130), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 43/186 (23%), Positives = 80/186 (43%), Gaps = 21/186 (11%)
Query: 60 FKSFIAECKALRNIRHRNLIKVLTACLGVDYQGNDFKALVYEFMHNRSLKEWLYPISKED 119
+ F E + L++++H N++K C G L+ E++ SL+++L K
Sbjct: 62 LRDFEREIEILKSLQHDNIVKYKGVCYSA---GRRNLKLIMEYLPYGSLRDYL---QKHK 115
Query: 120 ETYKRPXXXXXXXXXXIAIDVASALNYLHHDCQPVTAHCVLKPSNVLLDDDMTARVGDFG 179
E ++ Y+H D L N+L++++ ++GDFG
Sbjct: 116 ERIDHIKLLQYTSQICKGMEYLGTKRYIHRD---------LATRNILVENENRVKIGDFG 166
Query: 180 LARFLPPTRTQTSSIDVKGS-IGYIAPEYGVGNEVSTIGDVYSYGILLLELMI-----RE 233
L + LP + + S I + APE ++ S DV+S+G++L EL +
Sbjct: 167 LTKVLPQDKEXXKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYIEKSKS 226
Query: 234 KPSDIM 239
P++ M
Sbjct: 227 PPAEFM 232
>pdb|3TJC|A Chain A, Co-Crystal Structure Of Jak2 With Thienopyridine 8
pdb|3TJC|B Chain B, Co-Crystal Structure Of Jak2 With Thienopyridine 8
pdb|3TJD|A Chain A, Co-Crystal Structure Of Jak2 With Thienopyridine 19
pdb|3TJD|B Chain B, Co-Crystal Structure Of Jak2 With Thienopyridine 19
Length = 298
Score = 54.7 bits (130), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 43/186 (23%), Positives = 80/186 (43%), Gaps = 21/186 (11%)
Query: 60 FKSFIAECKALRNIRHRNLIKVLTACLGVDYQGNDFKALVYEFMHNRSLKEWLYPISKED 119
+ F E + L++++H N++K C G L+ E++ SL+++L K
Sbjct: 58 LRDFEREIEILKSLQHDNIVKYKGVCYSA---GRRNLKLIMEYLPYGSLRDYL---QKHK 111
Query: 120 ETYKRPXXXXXXXXXXIAIDVASALNYLHHDCQPVTAHCVLKPSNVLLDDDMTARVGDFG 179
E ++ Y+H D L N+L++++ ++GDFG
Sbjct: 112 ERIDHIKLLQYTSQICKGMEYLGTKRYIHRD---------LATRNILVENENRVKIGDFG 162
Query: 180 LARFLPPTRTQTSSIDVKGS-IGYIAPEYGVGNEVSTIGDVYSYGILLLELMI-----RE 233
L + LP + + S I + APE ++ S DV+S+G++L EL +
Sbjct: 163 LTKVLPQDKEXXKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYIEKSKS 222
Query: 234 KPSDIM 239
P++ M
Sbjct: 223 PPAEFM 228
>pdb|4AQC|A Chain A, Triazolopyridine-Based Inhibitor Of Janus Kinase 2
pdb|4AQC|B Chain B, Triazolopyridine-Based Inhibitor Of Janus Kinase 2
Length = 301
Score = 54.7 bits (130), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 43/186 (23%), Positives = 80/186 (43%), Gaps = 21/186 (11%)
Query: 60 FKSFIAECKALRNIRHRNLIKVLTACLGVDYQGNDFKALVYEFMHNRSLKEWLYPISKED 119
+ F E + L++++H N++K C G L+ E++ SL+++L K
Sbjct: 61 LRDFEREIEILKSLQHDNIVKYKGVCYSA---GRRNLKLIMEYLPYGSLRDYL---QKHK 114
Query: 120 ETYKRPXXXXXXXXXXIAIDVASALNYLHHDCQPVTAHCVLKPSNVLLDDDMTARVGDFG 179
E ++ Y+H D L N+L++++ ++GDFG
Sbjct: 115 ERIDHIKLLQYTSQICKGMEYLGTKRYIHRD---------LATRNILVENENRVKIGDFG 165
Query: 180 LARFLPPTRTQTSSIDVKGS-IGYIAPEYGVGNEVSTIGDVYSYGILLLELMI-----RE 233
L + LP + + S I + APE ++ S DV+S+G++L EL +
Sbjct: 166 LTKVLPQDKEXXKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYIEKSKS 225
Query: 234 KPSDIM 239
P++ M
Sbjct: 226 PPAEFM 231
>pdb|3BYM|A Chain A, X-Ray Co-Crystal Structure Aminobenzimidazole Triazine 1
Bound To Lck
Length = 272
Score = 54.7 bits (130), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 44/177 (24%), Positives = 81/177 (45%), Gaps = 20/177 (11%)
Query: 56 RQGAFK--SFIAECKALRNIRHRNLIKVLTACLGVDYQGNDFKALVYEFMHNRSLKEWLY 113
+QG+ +F+AE ++ ++H+ L+++ + ++ E+M N SL ++L
Sbjct: 47 KQGSMSPDAFLAEANLMKQLQHQRLVRLYAVVT------QEPIYIITEYMENGSLVDFLK 100
Query: 114 PISKEDETYKRPXXXXXXXXXXIAIDVASALNYLHHDCQPVTAHCVLKPSNVLLDDDMTA 173
S T + +A NY+H D L+ +N+L+ D ++
Sbjct: 101 TPSGIKLTINKLLDMAAQIAEGMAF--IEERNYIHRD---------LRAANILVSDTLSC 149
Query: 174 RVGDFGLARFLPPTRTQTSSIDVKGSIGYIAPEYGVGNEVSTIGDVYSYGILLLELM 230
++ DFGLAR + T+ K I + APE + DV+S+GILL E++
Sbjct: 150 KIADFGLARLIEDNEX-TAREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIV 205
>pdb|1QPE|A Chain A, Structural Analysis Of The Lymphocyte-Specific Kinase Lck
In Complex With Non-Selective And Src Family Selective
Kinase Inhibitors
pdb|1QPJ|A Chain A, Crystal Structure Of The Lymphocyte-Specific Kinase Lck In
Complex With Staurosporine.
pdb|1QPC|A Chain A, Structural Analysis Of The Lymphocyte-Specific Kinase Lck
In Complex With Non-Selective And Src Family Selective
Kinase Inhibitors
Length = 279
Score = 54.7 bits (130), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 46/179 (25%), Positives = 82/179 (45%), Gaps = 24/179 (13%)
Query: 56 RQGAFK--SFIAECKALRNIRHRNLIKVLTACLGVDYQGNDFKALVYEFMHNRSLKEWLY 113
+QG+ +F+AE ++ ++H+ L+++ + ++ E+M N SL ++L
Sbjct: 46 KQGSMSPDAFLAEANLMKQLQHQRLVRLYAVVT------QEPIYIITEYMENGSLVDFL- 98
Query: 114 PISKEDETYKRPXXXXXXXXXXIAIDVA--SALNYLHHDCQPVTAHCVLKPSNVLLDDDM 171
K K IA +A NY+H D L+ +N+L+ D +
Sbjct: 99 ---KTPSGIKLTINKLLDMAAQIAEGMAFIEERNYIHRD---------LRAANILVSDTL 146
Query: 172 TARVGDFGLARFLPPTRTQTSSIDVKGSIGYIAPEYGVGNEVSTIGDVYSYGILLLELM 230
+ ++ DFGLAR + T+ K I + APE + DV+S+GILL E++
Sbjct: 147 SCKIADFGLARLIEDNEX-TAREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIV 204
>pdb|2OFU|A Chain A, X-Ray Crystal Structure Of 2-Aminopyrimidine Carbamate 43
Bound To Lck
Length = 273
Score = 54.7 bits (130), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 46/179 (25%), Positives = 82/179 (45%), Gaps = 24/179 (13%)
Query: 56 RQGAFK--SFIAECKALRNIRHRNLIKVLTACLGVDYQGNDFKALVYEFMHNRSLKEWLY 113
+QG+ +F+AE ++ ++H+ L+++ + ++ E+M N SL ++L
Sbjct: 48 KQGSMSPDAFLAEANLMKQLQHQRLVRLYAVVT------QEPIYIITEYMENGSLVDFL- 100
Query: 114 PISKEDETYKRPXXXXXXXXXXIAIDVA--SALNYLHHDCQPVTAHCVLKPSNVLLDDDM 171
K K IA +A NY+H D L+ +N+L+ D +
Sbjct: 101 ---KTPSGIKLTINKLLDMAAQIAEGMAFIEERNYIHRD---------LRAANILVSDTL 148
Query: 172 TARVGDFGLARFLPPTRTQTSSIDVKGSIGYIAPEYGVGNEVSTIGDVYSYGILLLELM 230
+ ++ DFGLAR + T+ K I + APE + DV+S+GILL E++
Sbjct: 149 SCKIADFGLARLIEDNEX-TAREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIV 206
>pdb|2OG8|A Chain A, Crystal Structure Of Aminoquinazoline 36 Bound To Lck
pdb|2OG8|B Chain B, Crystal Structure Of Aminoquinazoline 36 Bound To Lck
Length = 265
Score = 54.7 bits (130), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 44/177 (24%), Positives = 81/177 (45%), Gaps = 20/177 (11%)
Query: 56 RQGAFK--SFIAECKALRNIRHRNLIKVLTACLGVDYQGNDFKALVYEFMHNRSLKEWLY 113
+QG+ +F+AE ++ ++H+ L+++ + ++ E+M N SL ++L
Sbjct: 41 KQGSMSPDAFLAEANLMKQLQHQRLVRLYAVVT------QEPIYIITEYMENGSLVDFLK 94
Query: 114 PISKEDETYKRPXXXXXXXXXXIAIDVASALNYLHHDCQPVTAHCVLKPSNVLLDDDMTA 173
S T + +A NY+H D L+ +N+L+ D ++
Sbjct: 95 TPSGIKLTINKLLDMAAQIAEGMAF--IEERNYIHRD---------LRAANILVSDTLSC 143
Query: 174 RVGDFGLARFLPPTRTQTSSIDVKGSIGYIAPEYGVGNEVSTIGDVYSYGILLLELM 230
++ DFGLAR + T+ K I + APE + DV+S+GILL E++
Sbjct: 144 KIADFGLARLIEDNE-YTAREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIV 199
>pdb|2PL0|A Chain A, Lck Bound To Imatinib
Length = 289
Score = 54.7 bits (130), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 46/179 (25%), Positives = 82/179 (45%), Gaps = 24/179 (13%)
Query: 56 RQGAFK--SFIAECKALRNIRHRNLIKVLTACLGVDYQGNDFKALVYEFMHNRSLKEWLY 113
+QG+ +F+AE ++ ++H+ L+++ + ++ E+M N SL ++L
Sbjct: 56 KQGSMSPDAFLAEANLMKQLQHQRLVRLYAVVT------QEPIYIITEYMENGSLVDFL- 108
Query: 114 PISKEDETYKRPXXXXXXXXXXIAIDVA--SALNYLHHDCQPVTAHCVLKPSNVLLDDDM 171
K K IA +A NY+H D L+ +N+L+ D +
Sbjct: 109 ---KTPSGIKLTINKLLDMAAQIAEGMAFIEERNYIHRD---------LRAANILVSDTL 156
Query: 172 TARVGDFGLARFLPPTRTQTSSIDVKGSIGYIAPEYGVGNEVSTIGDVYSYGILLLELM 230
+ ++ DFGLAR + T+ K I + APE + DV+S+GILL E++
Sbjct: 157 SCKIADFGLARLI-EDNEYTAREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIV 214
>pdb|2QLU|A Chain A, Crystal Structure Of Activin Receptor Type Ii Kinase
Domain From Human
Length = 314
Score = 54.7 bits (130), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 38/115 (33%), Positives = 56/115 (48%), Gaps = 13/115 (11%)
Query: 136 IAIDVASALNYLHHDC--------QPVTAHCVLKPSNVLLDDDMTARVGDFGLARFLPPT 187
+A ++ L+YLH D +P AH K NVLL D+TA + DFGLA P
Sbjct: 117 VAETMSRGLSYLHEDVPWCRGEGHKPSIAHRDFKSKNVLLKSDLTAVLADFGLAVRFEPG 176
Query: 188 RTQTSSIDVKGSIGYIAPEYGVG-----NEVSTIGDVYSYGILLLELMIREKPSD 237
+ + G+ Y+APE G + D+Y+ G++L EL+ R K +D
Sbjct: 177 KPPGDTHGQVGTRRYMAPEVLEGAINFQRDAFLRIDMYAMGLVLWELVSRCKAAD 231
>pdb|2OFV|A Chain A, Crystal Structure Of Aminoquinazoline 1 Bound To Lck
pdb|2OFV|B Chain B, Crystal Structure Of Aminoquinazoline 1 Bound To Lck
pdb|3B2W|A Chain A, Crystal Structure Of Pyrimidine Amide 11 Bound To Lck
Length = 277
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 46/179 (25%), Positives = 82/179 (45%), Gaps = 24/179 (13%)
Query: 56 RQGAFK--SFIAECKALRNIRHRNLIKVLTACLGVDYQGNDFKALVYEFMHNRSLKEWLY 113
+QG+ +F+AE ++ ++H+ L+++ + ++ E+M N SL ++L
Sbjct: 51 KQGSMSPDAFLAEANLMKQLQHQRLVRLYAVVT------QEPIYIITEYMENGSLVDFL- 103
Query: 114 PISKEDETYKRPXXXXXXXXXXIAIDVA--SALNYLHHDCQPVTAHCVLKPSNVLLDDDM 171
K K IA +A NY+H D L+ +N+L+ D +
Sbjct: 104 ---KTPSGIKLTINKLLDMAAQIAEGMAFIEERNYIHRD---------LRAANILVSDTL 151
Query: 172 TARVGDFGLARFLPPTRTQTSSIDVKGSIGYIAPEYGVGNEVSTIGDVYSYGILLLELM 230
+ ++ DFGLAR + T+ K I + APE + DV+S+GILL E++
Sbjct: 152 SCKIADFGLARLIEDNE-YTAREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIV 209
>pdb|3F69|A Chain A, Crystal Structure Of The Mycobacterium Tuberculosis Pknb
Mutant Kinase Domain In Complex With Kt5720
pdb|3F69|B Chain B, Crystal Structure Of The Mycobacterium Tuberculosis Pknb
Mutant Kinase Domain In Complex With Kt5720
Length = 311
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 37/108 (34%), Positives = 56/108 (51%), Gaps = 12/108 (11%)
Query: 139 DVASALNYLHHDCQPVTAHCVLKPSNVLLDDDMTARVGDFGLARFLPPTRT---QTSSID 195
D ALN+ H + H +KP+N+L+ +V DFG+AR + + QT++
Sbjct: 124 DACQALNFSHQNG---IIHRDVKPANILISATNAVKVVDFGIARAIADSGNSVXQTAA-- 178
Query: 196 VKGSIGYIAPEYGVGNEVSTIGDVYSYGILLLELMIREKPSDIMFEGD 243
V G+ Y++PE G+ V DVYS G +L E++ E P F GD
Sbjct: 179 VIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPP----FTGD 222
>pdb|3BYS|A Chain A, Co-Crystal Structure Of Lck And Aminopyrimidine Amide 10b
pdb|3BYU|A Chain A, Co-Crystal Structure Of Lck And Aminopyrimidine Reverse
Amide 23
Length = 277
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 46/179 (25%), Positives = 82/179 (45%), Gaps = 24/179 (13%)
Query: 56 RQGAFK--SFIAECKALRNIRHRNLIKVLTACLGVDYQGNDFKALVYEFMHNRSLKEWLY 113
+QG+ +F+AE ++ ++H+ L+++ + ++ E+M N SL ++L
Sbjct: 52 KQGSMSPDAFLAEANLMKQLQHQRLVRLYAVVT------QEPIYIITEYMENGSLVDFL- 104
Query: 114 PISKEDETYKRPXXXXXXXXXXIAIDVA--SALNYLHHDCQPVTAHCVLKPSNVLLDDDM 171
K K IA +A NY+H D L+ +N+L+ D +
Sbjct: 105 ---KTPSGIKLTINKLLDMAAQIAEGMAFIEERNYIHRD---------LRAANILVSDTL 152
Query: 172 TARVGDFGLARFLPPTRTQTSSIDVKGSIGYIAPEYGVGNEVSTIGDVYSYGILLLELM 230
+ ++ DFGLAR + T+ K I + APE + DV+S+GILL E++
Sbjct: 153 SCKIADFGLARLIEDNE-YTAREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIV 210
>pdb|1K2P|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase Domain
pdb|1K2P|B Chain B, Crystal Structure Of Bruton's Tyrosine Kinase Domain
Length = 263
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 48/196 (24%), Positives = 84/196 (42%), Gaps = 27/196 (13%)
Query: 63 FIAECKALRNIRHRNLIKVLTACLGVDYQGNDFKALVYEFMHNRSLKEWLYPISKEDETY 122
FI E K + N+ H L+++ C Q F ++ E+M N L +L + +T
Sbjct: 46 FIEEAKVMMNLSHEKLVQLYGVCTK---QRPIF--IITEYMANGCLLNYLREMRHRFQTQ 100
Query: 123 KRPXXXXXXXXXXIAIDVASALNYLHHDCQPVTAHCVLKPSNVLLDDDMTARVGDFGLAR 182
+ + DV A+ YL H L N L++D +V DFGL+R
Sbjct: 101 Q---------LLEMCKDVCEAMEYLE---SKQFLHRDLAARNCLVNDQGVVKVSDFGLSR 148
Query: 183 FLPPTRTQTSSIDVKGSIGYIAPEYGVGNEVSTIGDVYSYGILLLELMIREKPSDIMFEG 242
++ TSS+ K + + PE + ++ S+ D++++G+L+ E I G
Sbjct: 149 YVLDDEY-TSSVGSKFPVRWSPPEVLMYSKFSSKSDIWAFGVLMWE---------IYSLG 198
Query: 243 DMNLHKFAKMALSNHV 258
M +F + H+
Sbjct: 199 KMPYERFTNSETAEHI 214
>pdb|1QL6|A Chain A, The Catalytic Mechanism Of Phosphorylase Kinase Probed By
Mutational Studies
Length = 298
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 57/201 (28%), Positives = 81/201 (40%), Gaps = 36/201 (17%)
Query: 46 AGTFGFSHLRRQGAFKSFIAECKALRNIR-HRNLIKVLTACLGVDYQGNDFKALVYEFMH 104
G FS Q ++ + E LR + H N+I+ L Y+ N F LV++ M
Sbjct: 53 TGGGSFSAEEVQELREATLKEVDILRKVSGHPNIIQ-----LKDTYETNTFFFLVFDLMK 107
Query: 105 NRSLKEWLYPISKEDETYKRPXXXXXXXXXXIAIDVASALNYLHHDCQPVTAHCVLKPSN 164
L ++L E T I LN +H D LKP N
Sbjct: 108 KGELFDYL----TEKVTLSEKETRKIMRALLEVICALHKLNIVHRD---------LKPEN 154
Query: 165 VLLDDDMTARVGDFGLARFLPPTRTQTSSIDVKGSIGYIAPEY----------GVGNEVS 214
+LLDDDM ++ DFG + L P S V G+ Y+APE G G EV
Sbjct: 155 ILLDDDMNIKLTDFGFSCQLDPGEKLRS---VCGTPSYLAPEIIECSMNDNHPGYGKEV- 210
Query: 215 TIGDVYSYGILLLELMIREKP 235
D++S G+++ L+ P
Sbjct: 211 ---DMWSTGVIMYTLLAGSPP 228
>pdb|2OF2|A Chain A, Crystal Structure Of Furanopyrimidine 8 Bound To Lck
pdb|2OF4|A Chain A, Crystal Structure Of Furanopyrimidine 1 Bound To Lck
Length = 271
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 44/177 (24%), Positives = 81/177 (45%), Gaps = 20/177 (11%)
Query: 56 RQGAFK--SFIAECKALRNIRHRNLIKVLTACLGVDYQGNDFKALVYEFMHNRSLKEWLY 113
+QG+ +F+AE ++ ++H+ L+++ + ++ E+M N SL ++L
Sbjct: 46 KQGSMSPDAFLAEANLMKQLQHQRLVRLYAVVT------QEPIYIITEYMENGSLVDFLK 99
Query: 114 PISKEDETYKRPXXXXXXXXXXIAIDVASALNYLHHDCQPVTAHCVLKPSNVLLDDDMTA 173
S T + +A NY+H D L+ +N+L+ D ++
Sbjct: 100 TPSGIKLTINKLLDMAAQIAEGMAF--IEERNYIHRD---------LRAANILVSDTLSC 148
Query: 174 RVGDFGLARFLPPTRTQTSSIDVKGSIGYIAPEYGVGNEVSTIGDVYSYGILLLELM 230
++ DFGLAR + T+ K I + APE + DV+S+GILL E++
Sbjct: 149 KIADFGLARLIEDNE-YTAREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIV 204
>pdb|3P08|A Chain A, Crystal Structure Of The Human Btk Kinase Domain
pdb|3P08|B Chain B, Crystal Structure Of The Human Btk Kinase Domain
Length = 267
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 48/196 (24%), Positives = 84/196 (42%), Gaps = 27/196 (13%)
Query: 63 FIAECKALRNIRHRNLIKVLTACLGVDYQGNDFKALVYEFMHNRSLKEWLYPISKEDETY 122
FI E K + N+ H L+++ C Q F ++ E+M N L +L + +T
Sbjct: 50 FIEEAKVMMNLSHEKLVQLYGVCTK---QRPIF--IITEYMANGCLLNYLREMRHRFQTQ 104
Query: 123 KRPXXXXXXXXXXIAIDVASALNYLHHDCQPVTAHCVLKPSNVLLDDDMTARVGDFGLAR 182
+ + DV A+ YL H L N L++D +V DFGL+R
Sbjct: 105 Q---------LLEMCKDVCEAMEYLE---SKQFLHRDLAARNCLVNDQGVVKVSDFGLSR 152
Query: 183 FLPPTRTQTSSIDVKGSIGYIAPEYGVGNEVSTIGDVYSYGILLLELMIREKPSDIMFEG 242
++ TSS+ K + + PE + ++ S+ D++++G+L+ E I G
Sbjct: 153 YVLDDEY-TSSVGSKFPVRWSPPEVLMYSKFSSKSDIWAFGVLMWE---------IYSLG 202
Query: 243 DMNLHKFAKMALSNHV 258
M +F + H+
Sbjct: 203 KMPYERFTNSETAEHI 218
>pdb|3NYN|A Chain A, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Sangivamycin
pdb|3NYN|B Chain B, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Sangivamycin
pdb|3NYO|A Chain A, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Amp
pdb|3NYO|B Chain B, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Amp
Length = 576
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 45/151 (29%), Positives = 67/151 (44%), Gaps = 16/151 (10%)
Query: 86 LGVDYQGNDFKALVYEFMHNRSLKEWLYPISKEDETYKRPXXXXXXXXXXIAIDVASALN 145
L Y+ D LV M+ LK +Y + + R A ++ L
Sbjct: 249 LAYAYETKDALCLVLTLMNGGDLKFHIYHMGQAGFPEAR--------AVFYAAEICCGLE 300
Query: 146 YLHHDCQPVTAHCVLKPSNVLLDDDMTARVGDFGLARFLPPTRTQTSSIDVKGSIGYIAP 205
LH + + LKP N+LLDD R+ D GLA +P +T + G++GY+AP
Sbjct: 301 DLHRE---RIVYRDLKPENILLDDHGHIRISDLGLAVHVPEGQTIKGRV---GTVGYMAP 354
Query: 206 EYGVGNEVSTIG-DVYSYGILLLELMIREKP 235
E V NE T D ++ G LL E++ + P
Sbjct: 355 EV-VKNERYTFSPDWWALGCLLYEMIAGQSP 384
>pdb|3OCS|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase In Complex
With Inhibitor Cgi1746
Length = 271
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 48/196 (24%), Positives = 84/196 (42%), Gaps = 27/196 (13%)
Query: 63 FIAECKALRNIRHRNLIKVLTACLGVDYQGNDFKALVYEFMHNRSLKEWLYPISKEDETY 122
FI E K + N+ H L+++ C Q F ++ E+M N L +L + +T
Sbjct: 51 FIEEAKVMMNLSHEKLVQLYGVCTK---QRPIF--IITEYMANGCLLNYLREMRHRFQTQ 105
Query: 123 KRPXXXXXXXXXXIAIDVASALNYLHHDCQPVTAHCVLKPSNVLLDDDMTARVGDFGLAR 182
+ + DV A+ YL H L N L++D +V DFGL+R
Sbjct: 106 Q---------LLEMCKDVCEAMEYLE---SKQFLHRDLAARNCLVNDQGVVKVSDFGLSR 153
Query: 183 FLPPTRTQTSSIDVKGSIGYIAPEYGVGNEVSTIGDVYSYGILLLELMIREKPSDIMFEG 242
++ TSS+ K + + PE + ++ S+ D++++G+L+ E I G
Sbjct: 154 YVLDDEY-TSSVGSKFPVRWSPPEVLMYSKFSSKSDIWAFGVLMWE---------IYSLG 203
Query: 243 DMNLHKFAKMALSNHV 258
M +F + H+
Sbjct: 204 KMPYERFTNSETAEHI 219
>pdb|3S95|A Chain A, Crystal Structure Of The Human Limk1 Kinase Domain In
Complex With Staurosporine
pdb|3S95|B Chain B, Crystal Structure Of The Human Limk1 Kinase Domain In
Complex With Staurosporine
Length = 310
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 70/304 (23%), Positives = 115/304 (37%), Gaps = 66/304 (21%)
Query: 61 KSFIAECKALRNIRHRNLIKVLTACLGVDYQGNDFKALVYEFMHNRSLKEWLYPISKEDE 120
++F+ E K +R + H N++K + GV Y+ + E++ +L+ + + +
Sbjct: 52 RTFLKEVKVMRCLEHPNVLKFI----GVLYKDKRLN-FITEYIKGGTLRGIIKSMDSQYP 106
Query: 121 TYKRPXXXXXXXXXXIAIDVASALNYLHHDCQPVTAHCVLKPSNVLLDDDMTARVGDFGL 180
+R A D+AS + YLH H L N L+ ++ V DFGL
Sbjct: 107 WSQR---------VSFAKDIASGMAYLH---SMNIIHRDLNSHNCLVRENKNVVVADFGL 154
Query: 181 ARFLPPTRTQTSSI------------DVKGSIGYIAPEYGVGNEVSTIGDVYSYGILLLE 228
AR + +TQ + V G+ ++APE G DV+S+GI+L E
Sbjct: 155 ARLMVDEKTQPEGLRSLKKPDRKKRYTVVGNPYWMAPEMINGRSYDEKVDVFSFGIVLCE 214
Query: 229 LMIREKPSDIMFEGDMNLHKFAKMALSNHVKDIVDSILLNDDEKLVVRGDQKQTQAKINI 288
++ R V D + D L VRG +
Sbjct: 215 IIGR-------------------------VNADPDYLPRTMDFGLNVRGFLDRYCPP--- 246
Query: 289 IRECVISMVRIGVACSMESPQDRMKMTNVVHELQSIKNTLLGPKNLATCKAVIGRATEQL 348
C S I V C P+ R + H L++++ L G +G EQL
Sbjct: 247 --NCPPSFFPITVRCCDLDPEKRPSFVKLEHWLETLRMHLAG-------HLPLGPQLEQL 297
Query: 349 NKYF 352
++ F
Sbjct: 298 DRGF 301
>pdb|3PIX|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-Isopropyl-7-
(4-Methyl-Piperazin-1-Yl)-4-(5-Methyl-2h-Pyrazol-3-
Ylamino)-2h- Phthalazin-1-One
pdb|3PIY|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With R406
pdb|3PIZ|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
(5-Amino-1-O-
Tolyl-1h-Pyrazol-4-Yl)-[3-(1-Methanesulfonyl-Piperidin-
4-Yl)-Phenyl]- Methanone
pdb|3PJ1|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
3-(2,6-Dichloro-
Phenyl)-7-[4-(2-Diethylamino-Ethoxy)-Phenylamino]-1-
Methyl-3,4- Dihydro-1h-Pyrimido[4,5-D]pyrimidin-2-One
pdb|3PJ2|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-[4-(2-
Diethylamino-Ethoxy)-Phenylamino]-6-(4-Fluoro-Phenoxy)-
8-Methyl-8h- Pyrido[2,3-D]pyrimidin-7-One
pdb|3PJ3|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-Methyl-5-[(E)-
(3-Phenyl-Acryloyl)amino]-N-(2-Phenyl-3h-Imidazo[4,
5-B]pyridin-6-Yl)- Benzamide
Length = 274
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 48/196 (24%), Positives = 84/196 (42%), Gaps = 27/196 (13%)
Query: 63 FIAECKALRNIRHRNLIKVLTACLGVDYQGNDFKALVYEFMHNRSLKEWLYPISKEDETY 122
FI E K + N+ H L+++ C Q F ++ E+M N L +L + +T
Sbjct: 57 FIEEAKVMMNLSHEKLVQLYGVCTK---QRPIF--IITEYMANGCLLNYLREMRHRFQTQ 111
Query: 123 KRPXXXXXXXXXXIAIDVASALNYLHHDCQPVTAHCVLKPSNVLLDDDMTARVGDFGLAR 182
+ + DV A+ YL H L N L++D +V DFGL+R
Sbjct: 112 Q---------LLEMCKDVCEAMEYLE---SKQFLHRDLAARNCLVNDQGVVKVSDFGLSR 159
Query: 183 FLPPTRTQTSSIDVKGSIGYIAPEYGVGNEVSTIGDVYSYGILLLELMIREKPSDIMFEG 242
++ TSS+ K + + PE + ++ S+ D++++G+L+ E I G
Sbjct: 160 YVLDDEY-TSSVGSKFPVRWSPPEVLMYSKFSSKSDIWAFGVLMWE---------IYSLG 209
Query: 243 DMNLHKFAKMALSNHV 258
M +F + H+
Sbjct: 210 KMPYERFTNSETAEHI 225
>pdb|2ACX|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 6
Bound To Amppnp
pdb|2ACX|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 6
Bound To Amppnp
Length = 576
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 45/151 (29%), Positives = 67/151 (44%), Gaps = 16/151 (10%)
Query: 86 LGVDYQGNDFKALVYEFMHNRSLKEWLYPISKEDETYKRPXXXXXXXXXXIAIDVASALN 145
L Y+ D LV M+ LK +Y + + R A ++ L
Sbjct: 249 LAYAYETKDALCLVLTLMNGGDLKFHIYHMGQAGFPEAR--------AVFYAAEICCGLE 300
Query: 146 YLHHDCQPVTAHCVLKPSNVLLDDDMTARVGDFGLARFLPPTRTQTSSIDVKGSIGYIAP 205
LH + + LKP N+LLDD R+ D GLA +P +T + G++GY+AP
Sbjct: 301 DLHRE---RIVYRDLKPENILLDDHGHIRISDLGLAVHVPEGQTIKGRV---GTVGYMAP 354
Query: 206 EYGVGNEVSTIG-DVYSYGILLLELMIREKP 235
E V NE T D ++ G LL E++ + P
Sbjct: 355 EV-VKNERYTFSPDWWALGCLLYEMIAGQSP 384
>pdb|3GEN|A Chain A, The 1.6 A Crystal Structure Of Human Bruton's Tyrosine
Kinase Bound To A Pyrrolopyrimidine-Containing Compound
Length = 283
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 48/196 (24%), Positives = 84/196 (42%), Gaps = 27/196 (13%)
Query: 63 FIAECKALRNIRHRNLIKVLTACLGVDYQGNDFKALVYEFMHNRSLKEWLYPISKEDETY 122
FI E K + N+ H L+++ C Q F ++ E+M N L +L + +T
Sbjct: 66 FIEEAKVMMNLSHEKLVQLYGVCTK---QRPIF--IITEYMANGCLLNYLREMRHRFQTQ 120
Query: 123 KRPXXXXXXXXXXIAIDVASALNYLHHDCQPVTAHCVLKPSNVLLDDDMTARVGDFGLAR 182
+ + DV A+ YL H L N L++D +V DFGL+R
Sbjct: 121 Q---------LLEMCKDVCEAMEYLE---SKQFLHRDLAARNCLVNDQGVVKVSDFGLSR 168
Query: 183 FLPPTRTQTSSIDVKGSIGYIAPEYGVGNEVSTIGDVYSYGILLLELMIREKPSDIMFEG 242
++ TSS+ K + + PE + ++ S+ D++++G+L+ E I G
Sbjct: 169 YVLDDEY-TSSVGSKFPVRWSPPEVLMYSKFSSKSDIWAFGVLMWE---------IYSLG 218
Query: 243 DMNLHKFAKMALSNHV 258
M +F + H+
Sbjct: 219 KMPYERFTNSETAEHI 234
>pdb|4G31|A Chain A, Crystal Structure Of Gsk6414 Bound To Perk (R587-R1092,
Delete A660- T867) At 2.28 A Resolution
pdb|4G34|A Chain A, Crystal Structure Of Gsk6924 Bound To Perk (R587-R1092,
Delete A660- T867) At 2.70 A Resolution
Length = 299
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 49/192 (25%), Positives = 79/192 (41%), Gaps = 27/192 (14%)
Query: 56 RQGAFKSFIAECKALRNIRHRNLIKVLTACLGVD----YQGNDFKALVY---EFMHNRSL 108
R+ A + + E KAL + H +++ A L + Q + K +Y + +L
Sbjct: 43 RELAREKVMREVKALAKLEHPGIVRYFNAWLEKNTTEKLQPSSPKVYLYIQMQLCRKENL 102
Query: 109 KEWLYPISKEDETYKRPXXXXXXXXXXIAIDVASALNYLHHDCQPVTAHCVLKPSNVLLD 168
K+W+ +E + I + +A A+ +LH H LKPSN+
Sbjct: 103 KDWMNGRCTIEERER-------SVCLHIFLQIAEAVEFLHSKG---LMHRDLKPSNIFFT 152
Query: 169 DDMTARVGDFGLA----------RFLPPTRTQTSSIDVKGSIGYIAPEYGVGNEVSTIGD 218
D +VGDFGL L P G+ Y++PE GN S D
Sbjct: 153 MDDVVKVGDFGLVTAMDQDEEEQTVLTPMPAYARHTGQVGTKLYMSPEQIHGNSYSHKVD 212
Query: 219 VYSYGILLLELM 230
++S G++L EL+
Sbjct: 213 IFSLGLILFELL 224
>pdb|3Q6W|A Chain A, Structure Of Dually-phosphorylated Met Receptor Kinase In
Complex With An Mk-2461 Analog With Specificity For The
Activated Receptor
pdb|3R7O|A Chain A, Structure Of Dually Phosphorylated C-Met Receptor Kinase
In Complex With An Mk-2461 Analog
Length = 307
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 45/180 (25%), Positives = 77/180 (42%), Gaps = 18/180 (10%)
Query: 58 GAFKSFIAECKALRNIRHRNLIKVLTACLGVDYQGNDFKALVYEFMHNRSLKEWLYPISK 117
G F+ E +++ H N++ +L CL + +V +M + L+ ++
Sbjct: 72 GEVSQFLTEGIIMKDFSHPNVLSLLGICL----RSEGSPLVVLPYMKHGDLRNFI----- 122
Query: 118 EDETYKRPXXXXXXXXXXIAIDVASALNYLHHDCQPVTAHCVLKPSNVLLDDDMTARVGD 177
+ET+ + VA + YL H L N +LD+ T +V D
Sbjct: 123 RNETHN----PTVKDLIGFGLQVAKGMKYL---ASKKFVHRDLAARNCMLDEKFTVKVAD 175
Query: 178 FGLAR--FLPPTRTQTSSIDVKGSIGYIAPEYGVGNEVSTIGDVYSYGILLLELMIREKP 235
FGLAR + + + K + ++A E + +T DV+S+G+LL ELM R P
Sbjct: 176 FGLARDMYDKEXXSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAP 235
>pdb|2PHK|A Chain A, The Crystal Structure Of A Phosphorylase Kinase Peptide
Substrate Complex: Kinase Substrate Recognition
Length = 277
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 56/201 (27%), Positives = 81/201 (40%), Gaps = 36/201 (17%)
Query: 46 AGTFGFSHLRRQGAFKSFIAECKALRNIR-HRNLIKVLTACLGVDYQGNDFKALVYEFMH 104
G FS Q ++ + E LR + H N+I+ L Y+ N F LV++ M
Sbjct: 40 TGGGSFSAEEVQELREATLKEVDILRKVSGHPNIIQ-----LKDTYETNTFFFLVFDLMK 94
Query: 105 NRSLKEWLYPISKEDETYKRPXXXXXXXXXXIAIDVASALNYLHHDCQPVTAHCVLKPSN 164
L ++L E T I LN +H D LKP N
Sbjct: 95 KGELFDYL----TEKVTLSEKETRKIMRALLEVICALHKLNIVHRD---------LKPEN 141
Query: 165 VLLDDDMTARVGDFGLARFLPPTRTQTSSIDVKGSIGYIAPEY----------GVGNEVS 214
+LLDDDM ++ DFG + L P +V G+ Y+APE G G EV
Sbjct: 142 ILLDDDMNIKLTDFGFSCQLDPGEKLR---EVCGTPSYLAPEIIECSMNDNHPGYGKEV- 197
Query: 215 TIGDVYSYGILLLELMIREKP 235
D++S G+++ L+ P
Sbjct: 198 ---DMWSTGVIMYTLLAGSPP 215
>pdb|3UGC|A Chain A, Structural Basis Of Jak2 Inhibition By The Type Ii
Inhibtor Nvp-Bbt594
Length = 295
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 43/186 (23%), Positives = 80/186 (43%), Gaps = 21/186 (11%)
Query: 60 FKSFIAECKALRNIRHRNLIKVLTACLGVDYQGNDFKALVYEFMHNRSLKEWLYPISKED 119
+ F E + L++++H N++K C G L+ E++ SL+++L K
Sbjct: 55 LRDFEREIEILKSLQHDNIVKYKGVCYSA---GRRNLKLIMEYLPYGSLRDYL---QKHK 108
Query: 120 ETYKRPXXXXXXXXXXIAIDVASALNYLHHDCQPVTAHCVLKPSNVLLDDDMTARVGDFG 179
E ++ Y+H D L N+L++++ ++GDFG
Sbjct: 109 ERIDHIKLLQYTSQICKGMEYLGTKRYIHRD---------LATRNILVENENRVKIGDFG 159
Query: 180 LARFLPPTRTQTSSIDVKGS-IGYIAPEYGVGNEVSTIGDVYSYGILLLELMI-----RE 233
L + LP + + S I + APE ++ S DV+S+G++L EL +
Sbjct: 160 LTKVLPQDKEFFKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYIEKSKS 219
Query: 234 KPSDIM 239
P++ M
Sbjct: 220 PPAEFM 225
>pdb|1PHK|A Chain A, Two Structures Of The Catalytic Domain Of Phosphorylase,
Kinase: An Active Protein Kinase Complexed With
Nucleotide, Substrate-Analogue And Product
Length = 298
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 56/201 (27%), Positives = 81/201 (40%), Gaps = 36/201 (17%)
Query: 46 AGTFGFSHLRRQGAFKSFIAECKALRNIR-HRNLIKVLTACLGVDYQGNDFKALVYEFMH 104
G FS Q ++ + E LR + H N+I+ L Y+ N F LV++ M
Sbjct: 53 TGGGSFSAEEVQELREATLKEVDILRKVSGHPNIIQ-----LKDTYETNTFFFLVFDLMK 107
Query: 105 NRSLKEWLYPISKEDETYKRPXXXXXXXXXXIAIDVASALNYLHHDCQPVTAHCVLKPSN 164
L ++L E T I LN +H D LKP N
Sbjct: 108 KGELFDYL----TEKVTLSEKETRKIMRALLEVICALHKLNIVHRD---------LKPEN 154
Query: 165 VLLDDDMTARVGDFGLARFLPPTRTQTSSIDVKGSIGYIAPEY----------GVGNEVS 214
+LLDDDM ++ DFG + L P +V G+ Y+APE G G EV
Sbjct: 155 ILLDDDMNIKLTDFGFSCQLDPGEKLR---EVCGTPSYLAPEIIECSMNDNHPGYGKEV- 210
Query: 215 TIGDVYSYGILLLELMIREKP 235
D++S G+++ L+ P
Sbjct: 211 ---DMWSTGVIMYTLLAGSPP 228
>pdb|3Q6U|A Chain A, Structure Of The Apo Met Receptor Kinase In The
Dually-Phosphorylated, Activated State
Length = 308
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 45/180 (25%), Positives = 77/180 (42%), Gaps = 18/180 (10%)
Query: 58 GAFKSFIAECKALRNIRHRNLIKVLTACLGVDYQGNDFKALVYEFMHNRSLKEWLYPISK 117
G F+ E +++ H N++ +L CL + +V +M + L+ ++
Sbjct: 73 GEVSQFLTEGIIMKDFSHPNVLSLLGICL----RSEGSPLVVLPYMKHGDLRNFI----- 123
Query: 118 EDETYKRPXXXXXXXXXXIAIDVASALNYLHHDCQPVTAHCVLKPSNVLLDDDMTARVGD 177
+ET+ + VA + YL H L N +LD+ T +V D
Sbjct: 124 RNETHN----PTVKDLIGFGLQVAKGMKYL---ASKKFVHRDLAARNCMLDEKFTVKVAD 176
Query: 178 FGLAR--FLPPTRTQTSSIDVKGSIGYIAPEYGVGNEVSTIGDVYSYGILLLELMIREKP 235
FGLAR + + + K + ++A E + +T DV+S+G+LL ELM R P
Sbjct: 177 FGLARDMYDKEYYSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAP 236
>pdb|2G15|A Chain A, Structural Characterization Of Autoinhibited C-Met Kinase
pdb|3RHK|A Chain A, Crystal Structure Of The Catalytic Domain Of C-Met Kinase
In Complex With Arq 197
pdb|3RHK|B Chain B, Crystal Structure Of The Catalytic Domain Of C-Met Kinase
In Complex With Arq 197
Length = 318
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 45/180 (25%), Positives = 77/180 (42%), Gaps = 18/180 (10%)
Query: 58 GAFKSFIAECKALRNIRHRNLIKVLTACLGVDYQGNDFKALVYEFMHNRSLKEWLYPISK 117
G F+ E +++ H N++ +L CL + +V +M + L+ ++
Sbjct: 91 GEVSQFLTEGIIMKDFSHPNVLSLLGICL----RSEGSPLVVLPYMKHGDLRNFI----- 141
Query: 118 EDETYKRPXXXXXXXXXXIAIDVASALNYLHHDCQPVTAHCVLKPSNVLLDDDMTARVGD 177
+ET+ + VA + YL H L N +LD+ T +V D
Sbjct: 142 RNETHN----PTVKDLIGFGLQVAKGMKYL---ASKKFVHRDLAARNCMLDEKFTVKVAD 194
Query: 178 FGLAR--FLPPTRTQTSSIDVKGSIGYIAPEYGVGNEVSTIGDVYSYGILLLELMIREKP 235
FGLAR + + + K + ++A E + +T DV+S+G+LL ELM R P
Sbjct: 195 FGLARDMYDKEYYSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAP 254
>pdb|2RFN|A Chain A, X-ray Structure Of C-met With Inhibitor.
pdb|2RFN|B Chain B, X-ray Structure Of C-met With Inhibitor.
pdb|2RFS|A Chain A, X-Ray Structure Of Su11274 Bound To C-Met
pdb|3CCN|A Chain A, X-Ray Structure Of C-Met With Triazolopyridazine
Inhibitor.
pdb|3CD8|A Chain A, X-Ray Structure Of C-Met With Triazolopyridazine
Inhibitor.
pdb|3EFJ|A Chain A, Structure Of C-Met With Pyrimidone Inhibitor 7
pdb|3EFJ|B Chain B, Structure Of C-Met With Pyrimidone Inhibitor 7
pdb|3EFK|A Chain A, Structure Of C-Met With Pyrimidone Inhibitor 50
pdb|3EFK|B Chain B, Structure Of C-Met With Pyrimidone Inhibitor 50
Length = 310
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 45/180 (25%), Positives = 77/180 (42%), Gaps = 18/180 (10%)
Query: 58 GAFKSFIAECKALRNIRHRNLIKVLTACLGVDYQGNDFKALVYEFMHNRSLKEWLYPISK 117
G F+ E +++ H N++ +L CL + +V +M + L+ ++
Sbjct: 73 GEVSQFLTEGIIMKDFSHPNVLSLLGICL----RSEGSPLVVLPYMKHGDLRNFI----- 123
Query: 118 EDETYKRPXXXXXXXXXXIAIDVASALNYLHHDCQPVTAHCVLKPSNVLLDDDMTARVGD 177
+ET+ + VA + YL H L N +LD+ T +V D
Sbjct: 124 RNETHN----PTVKDLIGFGLQVAKGMKYL---ASKKFVHRDLAARNCMLDEKFTVKVAD 176
Query: 178 FGLAR--FLPPTRTQTSSIDVKGSIGYIAPEYGVGNEVSTIGDVYSYGILLLELMIREKP 235
FGLAR + + + K + ++A E + +T DV+S+G+LL ELM R P
Sbjct: 177 FGLARDMYDKEYYSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAP 236
>pdb|4GG5|A Chain A, Crystal Structure Of Cmet In Complex With Novel Inhibitor
pdb|4GG7|A Chain A, Crystal Structure Of Cmet In Complex With Novel Inhibitor
Length = 319
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 45/180 (25%), Positives = 77/180 (42%), Gaps = 18/180 (10%)
Query: 58 GAFKSFIAECKALRNIRHRNLIKVLTACLGVDYQGNDFKALVYEFMHNRSLKEWLYPISK 117
G F+ E +++ H N++ +L CL + +V +M + L+ ++
Sbjct: 92 GEVSQFLTEGIIMKDFSHPNVLSLLGICL----RSEGSPLVVLPYMKHGDLRNFI----- 142
Query: 118 EDETYKRPXXXXXXXXXXIAIDVASALNYLHHDCQPVTAHCVLKPSNVLLDDDMTARVGD 177
+ET+ + VA + YL H L N +LD+ T +V D
Sbjct: 143 RNETHN----PTVKDLIGFGLQVAKGMKYL---ASKKFVHRDLAARNCMLDEKFTVKVAD 195
Query: 178 FGLAR--FLPPTRTQTSSIDVKGSIGYIAPEYGVGNEVSTIGDVYSYGILLLELMIREKP 235
FGLAR + + + K + ++A E + +T DV+S+G+LL ELM R P
Sbjct: 196 FGLARDMYDKEYYSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAP 255
>pdb|3LQ8|A Chain A, Structure Of The Kinase Domain Of C-Met Bound To Xl880
(Gsk1
Length = 302
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 45/180 (25%), Positives = 77/180 (42%), Gaps = 18/180 (10%)
Query: 58 GAFKSFIAECKALRNIRHRNLIKVLTACLGVDYQGNDFKALVYEFMHNRSLKEWLYPISK 117
G F+ E +++ H N++ +L CL + +V +M + L+ ++
Sbjct: 71 GEVSQFLTEGIIMKDFSHPNVLSLLGICL----RSEGSPLVVLPYMKHGDLRNFI----- 121
Query: 118 EDETYKRPXXXXXXXXXXIAIDVASALNYLHHDCQPVTAHCVLKPSNVLLDDDMTARVGD 177
+ET+ + VA + YL H L N +LD+ T +V D
Sbjct: 122 RNETHN----PTVKDLIGFGLQVAKGMKYL---ASKKFVHRDLAARNCMLDEKFTVKVAD 174
Query: 178 FGLAR--FLPPTRTQTSSIDVKGSIGYIAPEYGVGNEVSTIGDVYSYGILLLELMIREKP 235
FGLAR + + + K + ++A E + +T DV+S+G+LL ELM R P
Sbjct: 175 FGLARDMYDKEYYSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAP 234
>pdb|3I5N|A Chain A, Crystal Structure Of C-Met With Triazolopyridazine
Inhibitor 13
pdb|3U6H|A Chain A, Crystal Structure Of C-Met In Complex With Pyrazolone
Inhibitor 26
pdb|3U6I|A Chain A, Crystal Structure Of C-Met In Complex With Pyrazolone
Inhibitor 58a
pdb|4DEG|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridazine Inhibitor 2
pdb|4DEH|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridinone Inhibitor 3
pdb|4DEI|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridinone Inhibitor 24
Length = 309
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 45/180 (25%), Positives = 77/180 (42%), Gaps = 18/180 (10%)
Query: 58 GAFKSFIAECKALRNIRHRNLIKVLTACLGVDYQGNDFKALVYEFMHNRSLKEWLYPISK 117
G F+ E +++ H N++ +L CL + +V +M + L+ ++
Sbjct: 72 GEVSQFLTEGIIMKDFSHPNVLSLLGICL----RSEGSPLVVLPYMKHGDLRNFI----- 122
Query: 118 EDETYKRPXXXXXXXXXXIAIDVASALNYLHHDCQPVTAHCVLKPSNVLLDDDMTARVGD 177
+ET+ + VA + YL H L N +LD+ T +V D
Sbjct: 123 RNETHN----PTVKDLIGFGLQVAKGMKYL---ASKKFVHRDLAARNCMLDEKFTVKVAD 175
Query: 178 FGLAR--FLPPTRTQTSSIDVKGSIGYIAPEYGVGNEVSTIGDVYSYGILLLELMIREKP 235
FGLAR + + + K + ++A E + +T DV+S+G+LL ELM R P
Sbjct: 176 FGLARDMYDKEYYSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAP 235
>pdb|2WGJ|A Chain A, X-Ray Structure Of Pf-02341066 Bound To The Kinase Domain
Of C-Met
pdb|2WKM|A Chain A, X-Ray Structure Of Pha-00665752 Bound To The Kinase Domain
Of C-Met
pdb|3ZXZ|A Chain A, X-Ray Structure Of Pf-04217903 Bound To The Kinase Domain
Of C-Met
pdb|3ZZE|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
N'-
((3z)-4-Chloro-7-Methyl-2-Oxo-1,2-Dihydro-3h-Indol-3-
Ylidene)-2-(4-Hydroxyphenyl)propanohydrazide
pdb|4AOI|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
4-( 3-((1h-
Pyrrolo(2,3-B)pyridin-3-Yl)methyl)-(1,2,4)triazolo(
4,3-B)(1,2,4) Triazin-6-Yl)benzonitrile
pdb|4AP7|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
4-( (6-(4-
Fluorophenyl)-(1,2,4)triazolo(4,3-B)(1,2,
4)triazin-3-Yl)methyl) Phenol
Length = 306
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 45/180 (25%), Positives = 77/180 (42%), Gaps = 18/180 (10%)
Query: 58 GAFKSFIAECKALRNIRHRNLIKVLTACLGVDYQGNDFKALVYEFMHNRSLKEWLYPISK 117
G F+ E +++ H N++ +L CL + +V +M + L+ ++
Sbjct: 70 GEVSQFLTEGIIMKDFSHPNVLSLLGICL----RSEGSPLVVLPYMKHGDLRNFI----- 120
Query: 118 EDETYKRPXXXXXXXXXXIAIDVASALNYLHHDCQPVTAHCVLKPSNVLLDDDMTARVGD 177
+ET+ + VA + YL H L N +LD+ T +V D
Sbjct: 121 RNETHN----PTVKDLIGFGLQVAKGMKYL---ASKKFVHRDLAARNCMLDEKFTVKVAD 173
Query: 178 FGLAR--FLPPTRTQTSSIDVKGSIGYIAPEYGVGNEVSTIGDVYSYGILLLELMIREKP 235
FGLAR + + + K + ++A E + +T DV+S+G+LL ELM R P
Sbjct: 174 FGLARDMYDKEYYSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAP 233
>pdb|2WD1|A Chain A, Human C-Met Kinase In Complex With Azaindole Inhibitor
Length = 292
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 45/180 (25%), Positives = 77/180 (42%), Gaps = 18/180 (10%)
Query: 58 GAFKSFIAECKALRNIRHRNLIKVLTACLGVDYQGNDFKALVYEFMHNRSLKEWLYPISK 117
G F+ E +++ H N++ +L CL + +V +M + L+ ++
Sbjct: 65 GEVSQFLTEGIIMKDFSHPNVLSLLGICL----RSEGSPLVVLPYMKHGDLRNFI----- 115
Query: 118 EDETYKRPXXXXXXXXXXIAIDVASALNYLHHDCQPVTAHCVLKPSNVLLDDDMTARVGD 177
+ET+ + VA + YL H L N +LD+ T +V D
Sbjct: 116 RNETHN----PTVKDLIGFGLQVAKGMKYL---ASKKFVHRDLAARNCMLDEKFTVKVAD 168
Query: 178 FGLAR--FLPPTRTQTSSIDVKGSIGYIAPEYGVGNEVSTIGDVYSYGILLLELMIREKP 235
FGLAR + + + K + ++A E + +T DV+S+G+LL ELM R P
Sbjct: 169 FGLARDMYDKEYYSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAP 228
>pdb|3F66|A Chain A, Human C-Met Kinase In Complex With Quinoxaline Inhibitor
pdb|3F66|B Chain B, Human C-Met Kinase In Complex With Quinoxaline Inhibitor
Length = 298
Score = 52.8 bits (125), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 45/180 (25%), Positives = 77/180 (42%), Gaps = 18/180 (10%)
Query: 58 GAFKSFIAECKALRNIRHRNLIKVLTACLGVDYQGNDFKALVYEFMHNRSLKEWLYPISK 117
G F+ E +++ H N++ +L CL + +V +M + L+ ++
Sbjct: 68 GEVSQFLTEGIIMKDFSHPNVLSLLGICL----RSEGSPLVVLPYMKHGDLRNFI----- 118
Query: 118 EDETYKRPXXXXXXXXXXIAIDVASALNYLHHDCQPVTAHCVLKPSNVLLDDDMTARVGD 177
+ET+ + VA + YL H L N +LD+ T +V D
Sbjct: 119 RNETHN----PTVKDLIGFGLQVAKGMKYL---ASKKFVHRDLAARNCMLDEKFTVKVAD 171
Query: 178 FGLAR--FLPPTRTQTSSIDVKGSIGYIAPEYGVGNEVSTIGDVYSYGILLLELMIREKP 235
FGLAR + + + K + ++A E + +T DV+S+G+LL ELM R P
Sbjct: 172 FGLARDMYDKEYYSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAP 231
>pdb|3KMW|A Chain A, Crystal Structure Of The IlkALPHA-Parvin Core Complex
(Mgatp)
pdb|3REP|A Chain A, Crystal Structure Of The IlkALPHA-Parvin Core Complex
(Mnatp)
Length = 271
Score = 52.8 bits (125), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 48/180 (26%), Positives = 75/180 (41%), Gaps = 26/180 (14%)
Query: 61 KSFIAECKALRNIRHRNLIKVLTACLGVDYQGNDFKALVYEFMHNRSLKEWLYPISKEDE 120
+ F EC LR H N++ VL AC L+ +M SL Y + E
Sbjct: 52 RDFNEECPRLRIFSHPNVLPVLGAC---QSPPAPHPTLITHWMPYGSL----YNVLHEGT 104
Query: 121 TYKRPXXXXXXXXXXIAIDVASALNYLHHDCQPVTAHCVLKPSNVLLDDDMTARV--GDF 178
+ A+D+A + +LH +P+ L +V++D+DMTAR+ D
Sbjct: 105 NF----VVDQSQAVKFALDMARGMAFLH-TLEPLIPRHALNSRSVMIDEDMTARISMADV 159
Query: 179 GLARFLPPTRTQTSSIDVKGSIGYIAPEYGVGNEVST---IGDVYSYGILLLELMIREKP 235
+ F P R + ++APE T D++S+ +LL EL+ RE P
Sbjct: 160 KFS-FQSPGRMYAPA--------WVAPEALQKKPEDTNRRSADMWSFAVLLWELVTREVP 210
>pdb|2XA4|A Chain A, Inhibitors Of Jak2 Kinase Domain
pdb|2XA4|B Chain B, Inhibitors Of Jak2 Kinase Domain
Length = 298
Score = 52.8 bits (125), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 42/186 (22%), Positives = 82/186 (44%), Gaps = 21/186 (11%)
Query: 60 FKSFIAECKALRNIRHRNLIKVLTACLGVDYQGNDFKALVYEFMHNRSLKEWLYPISKED 119
+ F E + L++++H N++K C G L+ E++ SL+++L ++
Sbjct: 58 LRDFEREIEILKSLQHDNIVKYKGVCYSA---GRRNLKLIMEYLPYGSLRDYLQAHAERI 114
Query: 120 ETYKRPXXXXXXXXXXIAIDVASALNYLHHDCQPVTAHCVLKPSNVLLDDDMTARVGDFG 179
+ K ++ Y+H D L N+L++++ ++GDFG
Sbjct: 115 DHIK---LLQYTSQICKGMEYLGTKRYIHRD---------LATRNILVENENRVKIGDFG 162
Query: 180 LARFLPPTRTQTSSIDVKGS-IGYIAPEYGVGNEVSTIGDVYSYGILLLELMI-----RE 233
L + LP + + S I + APE ++ S DV+S+G++L EL +
Sbjct: 163 LTKVLPQDKEXXKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYIEKSKS 222
Query: 234 KPSDIM 239
P++ M
Sbjct: 223 PPAEFM 228
>pdb|3MPM|A Chain A, Lck Complexed With A Pyrazolopyrimidine
Length = 267
Score = 52.8 bits (125), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 45/179 (25%), Positives = 82/179 (45%), Gaps = 24/179 (13%)
Query: 56 RQGAFK--SFIAECKALRNIRHRNLIKVLTACLGVDYQGNDFKALVYEFMHNRSLKEWLY 113
+QG+ +F+AE ++ ++H+ L+++ + ++ E+M N SL ++L
Sbjct: 42 KQGSMSPDAFLAEANLMKQLQHQRLVRLYAVVT------QEPIYIITEYMENGSLVDFL- 94
Query: 114 PISKEDETYKRPXXXXXXXXXXIAIDVA--SALNYLHHDCQPVTAHCVLKPSNVLLDDDM 171
K K IA +A NY+H + L+ +N+L+ D +
Sbjct: 95 ---KTPSGIKLTINKLLDMAAQIAEGMAFIEERNYIHRN---------LRAANILVSDTL 142
Query: 172 TARVGDFGLARFLPPTRTQTSSIDVKGSIGYIAPEYGVGNEVSTIGDVYSYGILLLELM 230
+ ++ DFGLAR + T+ K I + APE + DV+S+GILL E++
Sbjct: 143 SCKIADFGLARLIEDNE-YTAREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIV 200
>pdb|4BBE|A Chain A, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|B Chain B, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|C Chain C, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|D Chain D, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|A Chain A, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|B Chain B, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|C Chain C, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|D Chain D, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
Length = 298
Score = 52.4 bits (124), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 42/186 (22%), Positives = 80/186 (43%), Gaps = 21/186 (11%)
Query: 60 FKSFIAECKALRNIRHRNLIKVLTACLGVDYQGNDFKALVYEFMHNRSLKEWLYPISKED 119
+ F E + L++++H N++K C G L+ E++ SL+++L K
Sbjct: 56 LRDFEREIEILKSLQHDNIVKYKGVCYSA---GRRNLKLIMEYLPYGSLRDYL---QKHK 109
Query: 120 ETYKRPXXXXXXXXXXIAIDVASALNYLHHDCQPVTAHCVLKPSNVLLDDDMTARVGDFG 179
E ++ Y+H + L N+L++++ ++GDFG
Sbjct: 110 ERIDHIKLLQYTSQICKGMEYLGTKRYIHRN---------LATRNILVENENRVKIGDFG 160
Query: 180 LARFLPPTRTQTSSIDVKGS-IGYIAPEYGVGNEVSTIGDVYSYGILLLELMI-----RE 233
L + LP + + S I + APE ++ S DV+S+G++L EL +
Sbjct: 161 LTKVLPQDKEYYKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYIEKSKS 220
Query: 234 KPSDIM 239
P++ M
Sbjct: 221 PPAEFM 226
>pdb|2XYU|A Chain A, Crystal Structure Of Epha4 Kinase Domain In Complex With
Vuf 12058
Length = 285
Score = 52.4 bits (124), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 45/175 (25%), Positives = 77/175 (44%), Gaps = 26/175 (14%)
Query: 61 KSFIAECKALRNIRHRNLIK---VLTACLGVDYQGNDFKALVYEFMHNRSLKEWLYPISK 117
+ F++E + H N+I V+T C V ++ E+M N SL +L K
Sbjct: 54 RDFLSEASIMGQFDHPNIIHLEGVVTKCKPV--------MIITEYMENGSLDAFL---RK 102
Query: 118 EDETYKRPXXXXXXXXXXIAIDVASALNYLHHDCQPVTAHCVLKPSNVLLDDDMTARVGD 177
D + + S ++Y+H D L N+L++ ++ +V D
Sbjct: 103 NDGRFTVIQLVGMLRGIGSGMKYLSDMSYVHRD---------LAARNILVNSNLVCKVSD 153
Query: 178 FGLARFLP--PTRTQTSSIDVKGSIGYIAPEYGVGNEVSTIGDVYSYGILLLELM 230
FG++R L P T+ K I + APE + ++ DV+SYGI++ E+M
Sbjct: 154 FGMSRVLEDDPEAAYTTR-GGKIPIRWTAPEAIAYRKFTSASDVWSYGIVMWEVM 207
>pdb|2Y6M|A Chain A, Crystal Structure Of Epha4 Kinase Domain
pdb|2Y6O|A Chain A, Crystal Structure Of Epha4 Kinase Domain In Complex With
Dasatinib
Length = 291
Score = 52.4 bits (124), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 45/175 (25%), Positives = 77/175 (44%), Gaps = 26/175 (14%)
Query: 61 KSFIAECKALRNIRHRNLIK---VLTACLGVDYQGNDFKALVYEFMHNRSLKEWLYPISK 117
+ F++E + H N+I V+T C V ++ E+M N SL +L K
Sbjct: 60 RDFLSEASIMGQFDHPNIIHLEGVVTKCKPV--------MIITEYMENGSLDAFL---RK 108
Query: 118 EDETYKRPXXXXXXXXXXIAIDVASALNYLHHDCQPVTAHCVLKPSNVLLDDDMTARVGD 177
D + + S ++Y+H D L N+L++ ++ +V D
Sbjct: 109 NDGRFTVIQLVGMLRGIGSGMKYLSDMSYVHRD---------LAARNILVNSNLVCKVSD 159
Query: 178 FGLARFLP--PTRTQTSSIDVKGSIGYIAPEYGVGNEVSTIGDVYSYGILLLELM 230
FG++R L P T+ K I + APE + ++ DV+SYGI++ E+M
Sbjct: 160 FGMSRVLEDDPEAAYTTR-GGKIPIRWTAPEAIAYRKFTSASDVWSYGIVMWEVM 213
>pdb|2QOK|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:s768a Triple Mutant
Length = 373
Score = 52.0 bits (123), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 49/186 (26%), Positives = 80/186 (43%), Gaps = 30/186 (16%)
Query: 50 GFSHLRRQGAFKSFIAECKALRNIRHRNLIK---VLTACLGVDYQGNDFKALVYEFMHNR 106
G++ +R + F+ E + H N+I+ V+T V +V E+M N
Sbjct: 84 GYTEKQR----RDFLGEASIMGQFDHPNIIRLEGVVTKSKPV--------MIVTEYMENG 131
Query: 107 SLKEWLYPISKEDETYKRPXXXXXXXXXXIAIDVASALNYLHHDCQPVTAHCVLKPSNVL 166
SL +L K D + + S + Y+H D L N+L
Sbjct: 132 SLDSFL---RKHDAQFTVIQLVGMLRGIASGMKYLSDMGYVHRD---------LAARNIL 179
Query: 167 LDDDMTARVGDFGLARFLP--PTRTQTSSIDVKGSIGYIAPEYGVGNEVSTIGDVYSYGI 224
++ ++ +V DFGLAR L P T+ K I + +PE + ++ DV+SYGI
Sbjct: 180 INSNLVCKVSDFGLARVLEDDPEAAYTTR-GGKIPIRWTSPEAIAYRKFTSASDVWSYGI 238
Query: 225 LLLELM 230
+L E+M
Sbjct: 239 VLWEVM 244
>pdb|3OCT|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase Mutant V555r
In Complex With Dasatinib
Length = 265
Score = 52.0 bits (123), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 48/196 (24%), Positives = 83/196 (42%), Gaps = 27/196 (13%)
Query: 63 FIAECKALRNIRHRNLIKVLTACLGVDYQGNDFKALVYEFMHNRSLKEWLYPISKEDETY 122
FI E K + N+ H L+++ C Q F ++ E+M N L +L + +T
Sbjct: 51 FIEEAKVMMNLSHEKLVQLYGVCTK---QRPIF--IITEYMANGCLLNYLREMRHRFQTQ 105
Query: 123 KRPXXXXXXXXXXIAIDVASALNYLHHDCQPVTAHCVLKPSNVLLDDDMTARVGDFGLAR 182
+ + DV A+ YL H L N L++D +V DFGL+R
Sbjct: 106 Q---------LLEMCKDVCEAMEYLE---SKQFLHRDLAARNCLVNDQGVVKVSDFGLSR 153
Query: 183 FLPPTRTQTSSIDVKGSIGYIAPEYGVGNEVSTIGDVYSYGILLLELMIREKPSDIMFEG 242
++ TSS K + + PE + ++ S+ D++++G+L+ E I G
Sbjct: 154 YVLDDEY-TSSRGSKFPVRWSPPEVLMYSKFSSKSDIWAFGVLMWE---------IYSLG 203
Query: 243 DMNLHKFAKMALSNHV 258
M +F + H+
Sbjct: 204 KMPYERFTNSETAEHI 219
>pdb|3KUL|B Chain B, Kinase Domain Of Human Ephrin Type-A Receptor 8 (Epha8)
Length = 325
Score = 52.0 bits (123), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 49/178 (27%), Positives = 78/178 (43%), Gaps = 21/178 (11%)
Query: 61 KSFIAECKALRNIRHRNLIKVLTACLGVDYQGNDFKALVYEFMHNRSLKEWLYPISKEDE 120
+ F++E + H N+I++ GV +G +V E+M N SL +L D
Sbjct: 95 RDFLSEASIMGQFDHPNIIRLE----GVVTRGR-LAMIVTEYMENGSLDTFL---RTHDG 146
Query: 121 TYKRPXXXXXXXXXXIAIDVASALNYLHHDCQPVTAHCVLKPSNVLLDDDMTARVGDFGL 180
+ + S L Y+H D L NVL+D ++ +V DFGL
Sbjct: 147 QFTIMQLVGMLRGVGAGMRYLSDLGYVHRD---------LAARNVLVDSNLVCKVSDFGL 197
Query: 181 ARFLP--PTRTQTSSIDVKGSIGYIAPEYGVGNEVSTIGDVYSYGILLLE-LMIREKP 235
+R L P T++ K I + APE S+ DV+S+G+++ E L E+P
Sbjct: 198 SRVLEDDPDAAXTTT-GGKIPIRWTAPEAIAFRTFSSASDVWSFGVVMWEVLAYGERP 254
>pdb|1MQB|A Chain A, Crystal Structure Of Ephrin A2 (Epha2) Receptor Protein
Kinase
pdb|1MQB|B Chain B, Crystal Structure Of Ephrin A2 (Epha2) Receptor Protein
Kinase
Length = 333
Score = 51.6 bits (122), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 44/178 (24%), Positives = 82/178 (46%), Gaps = 25/178 (14%)
Query: 63 FIAECKALRNIRHRNLIKVLTACLGVDYQGNDFKAL--VYEFMHNRSLKEWLYPISKEDE 120
F+ E + H N+I++ + +K + + E+M N +L ++L ++D
Sbjct: 93 FLGEAGIMGQFSHHNIIRLEGVI-------SKYKPMMIITEYMENGALDKFL---REKDG 142
Query: 121 TYKRPXXXXXXXXXXIAIDVASALNYLHHDCQPVTAHCVLKPSNVLLDDDMTARVGDFGL 180
+ + + +NY+H D L N+L++ ++ +V DFGL
Sbjct: 143 EFSVLQLVGMLRGIAAGMKYLANMNYVHRD---------LAARNILVNSNLVCKVSDFGL 193
Query: 181 ARFLP--PTRTQTSSIDVKGSIGYIAPEYGVGNEVSTIGDVYSYGILLLELMIR-EKP 235
+R L P T T+S K I + APE + ++ DV+S+GI++ E+M E+P
Sbjct: 194 SRVLEDDPEATYTTS-GGKIPIRWTAPEAISYRKFTSASDVWSFGIVMWEVMTYGERP 250
>pdb|3DKC|A Chain A, Sgx Clone 5698a65kfg1h1
pdb|3DKF|A Chain A, Sgx Clone 5698a65kfg1h1
Length = 317
Score = 51.6 bits (122), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 44/180 (24%), Positives = 77/180 (42%), Gaps = 18/180 (10%)
Query: 58 GAFKSFIAECKALRNIRHRNLIKVLTACLGVDYQGNDFKALVYEFMHNRSLKEWLYPISK 117
G F+ E +++ H N++ +L CL + +V +M + L+ ++
Sbjct: 74 GEVSQFLTEGIIMKDFSHPNVLSLLGICL----RSEGSPLVVLPYMKHGDLRNFI----- 124
Query: 118 EDETYKRPXXXXXXXXXXIAIDVASALNYLHHDCQPVTAHCVLKPSNVLLDDDMTARVGD 177
+ET+ + VA + +L H L N +LD+ T +V D
Sbjct: 125 RNETHN----PTVKDLIGFGLQVAKGMKFL---ASKKFVHRDLAARNCMLDEKFTVKVAD 177
Query: 178 FGLARFLPPTRTQT--SSIDVKGSIGYIAPEYGVGNEVSTIGDVYSYGILLLELMIREKP 235
FGLAR + + + K + ++A E + +T DV+S+G+LL ELM R P
Sbjct: 178 FGLARDMYDKEFDSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAP 237
>pdb|3DKG|A Chain A, Sgx Clone 5698a109kfg1h1
Length = 317
Score = 51.6 bits (122), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 44/180 (24%), Positives = 77/180 (42%), Gaps = 18/180 (10%)
Query: 58 GAFKSFIAECKALRNIRHRNLIKVLTACLGVDYQGNDFKALVYEFMHNRSLKEWLYPISK 117
G F+ E +++ H N++ +L CL + +V +M + L+ ++
Sbjct: 74 GEVSQFLTEGIIMKDFSHPNVLSLLGICL----RSEGSPLVVLPYMKHGDLRNFI----- 124
Query: 118 EDETYKRPXXXXXXXXXXIAIDVASALNYLHHDCQPVTAHCVLKPSNVLLDDDMTARVGD 177
+ET+ + VA + +L H L N +LD+ T +V D
Sbjct: 125 RNETHN----PTVKDLIGFGLQVAKGMKFL---ASKKFVHRDLAARNCMLDEKFTVKVAD 177
Query: 178 FGLARFLPPTRTQT--SSIDVKGSIGYIAPEYGVGNEVSTIGDVYSYGILLLELMIREKP 235
FGLAR + + + K + ++A E + +T DV+S+G+LL ELM R P
Sbjct: 178 FGLARDMLDKEFDSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAP 237
>pdb|3A4P|A Chain A, Human C-Met Kinase Domain Complexed With
6-Benzyloxyquinoline Inhibitor
Length = 319
Score = 51.6 bits (122), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 44/180 (24%), Positives = 77/180 (42%), Gaps = 18/180 (10%)
Query: 58 GAFKSFIAECKALRNIRHRNLIKVLTACLGVDYQGNDFKALVYEFMHNRSLKEWLYPISK 117
G F+ E +++ H N++ +L CL + +V +M + L+ ++
Sbjct: 78 GEVSQFLTEGIIMKDFSHPNVLSLLGICL----RSEGSPLVVLPYMKHGDLRNFI----- 128
Query: 118 EDETYKRPXXXXXXXXXXIAIDVASALNYLHHDCQPVTAHCVLKPSNVLLDDDMTARVGD 177
+ET+ + VA + +L H L N +LD+ T +V D
Sbjct: 129 RNETHN----PTVKDLIGFGLQVAKGMKFL---ASKKFVHRDLAARNCMLDEKFTVKVAD 181
Query: 178 FGLARFLPPTRTQT--SSIDVKGSIGYIAPEYGVGNEVSTIGDVYSYGILLLELMIREKP 235
FGLAR + + + K + ++A E + +T DV+S+G+LL ELM R P
Sbjct: 182 FGLARDMYDKEFDSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAP 241
>pdb|3KUL|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 8 (Epha8)
Length = 325
Score = 51.6 bits (122), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 49/178 (27%), Positives = 78/178 (43%), Gaps = 21/178 (11%)
Query: 61 KSFIAECKALRNIRHRNLIKVLTACLGVDYQGNDFKALVYEFMHNRSLKEWLYPISKEDE 120
+ F++E + H N+I++ GV +G +V E+M N SL +L D
Sbjct: 95 RDFLSEASIMGQFDHPNIIRLE----GVVTRGR-LAMIVTEYMENGSLDTFL---RTHDG 146
Query: 121 TYKRPXXXXXXXXXXIAIDVASALNYLHHDCQPVTAHCVLKPSNVLLDDDMTARVGDFGL 180
+ + S L Y+H D L NVL+D ++ +V DFGL
Sbjct: 147 QFTIMQLVGMLRGVGAGMRYLSDLGYVHRD---------LAARNVLVDSNLVCKVSDFGL 197
Query: 181 ARFLP--PTRTQTSSIDVKGSIGYIAPEYGVGNEVSTIGDVYSYGILLLE-LMIREKP 235
+R L P T++ K I + APE S+ DV+S+G+++ E L E+P
Sbjct: 198 SRVLEDDPDAAYTTT-GGKIPIRWTAPEAIAFRTFSSASDVWSFGVVMWEVLAYGERP 254
>pdb|1R0P|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
The Microbial Alkaloid K-252a
pdb|1R1W|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met
Length = 312
Score = 51.6 bits (122), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 44/180 (24%), Positives = 77/180 (42%), Gaps = 18/180 (10%)
Query: 58 GAFKSFIAECKALRNIRHRNLIKVLTACLGVDYQGNDFKALVYEFMHNRSLKEWLYPISK 117
G F+ E +++ H N++ +L CL + +V +M + L+ ++
Sbjct: 71 GEVSQFLTEGIIMKDFSHPNVLSLLGICL----RSEGSPLVVLPYMKHGDLRNFI----- 121
Query: 118 EDETYKRPXXXXXXXXXXIAIDVASALNYLHHDCQPVTAHCVLKPSNVLLDDDMTARVGD 177
+ET+ + VA + +L H L N +LD+ T +V D
Sbjct: 122 RNETHN----PTVKDLIGFGLQVAKGMKFL---ASKKFVHRDLAARNCMLDEKFTVKVAD 174
Query: 178 FGLARFLPPTRTQT--SSIDVKGSIGYIAPEYGVGNEVSTIGDVYSYGILLLELMIREKP 235
FGLAR + + + K + ++A E + +T DV+S+G+LL ELM R P
Sbjct: 175 FGLARDMYDKEFDSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAP 234
>pdb|1FOT|A Chain A, Structure Of The Unliganded Camp-Dependent Protein Kinase
Catalytic Subunit From Saccharomyces Cerevisiae
Length = 318
Score = 51.6 bits (122), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 40/138 (28%), Positives = 66/138 (47%), Gaps = 13/138 (9%)
Query: 137 AIDVASALNYLHHDCQPVTAHCVLKPSNVLLDDDMTARVGDFGLARFLPPTRTQTSSIDV 196
A +V AL YLH + LKP N+LLD + ++ DFG A+++P + +
Sbjct: 112 AAEVCLALEYLHSKD---IIYRDLKPENILLDKNGHIKITDFGFAKYVPDV-----TYXL 163
Query: 197 KGSIGYIAPEYGVGNEVSTIGDVYSYGILLLELMIREKP---SDIM--FEGDMNLHKFAK 251
G+ YIAPE + D +S+GIL+ E++ P S+ M +E +N
Sbjct: 164 CGTPDYIAPEVVSTKPYNKSIDWWSFGILIYEMLAGYTPFYDSNTMKTYEKILNAELRFP 223
Query: 252 MALSNHVKDIVDSILLND 269
+ VKD++ ++ D
Sbjct: 224 PFFNEDVKDLLSRLITRD 241
>pdb|1OIT|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-dependent Kinase Inhibitors Identified Through
Structure-based Hybridisation
Length = 299
Score = 51.2 bits (121), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 52/198 (26%), Positives = 89/198 (44%), Gaps = 26/198 (13%)
Query: 57 QGAFKSFIAECKALRNIRHRNLIKVLTACLGVDYQGNDFKALVYEFMHNRSLKEWLYPIS 116
+G + I E L+ + H N++K+L V + N LV+EF+H + LK+++ +
Sbjct: 43 EGVPSTAIREISLLKELNHPNIVKLL----DVIHTENKL-YLVFEFLH-QDLKKFM--DA 94
Query: 117 KEDETYKRPXXXXXXXXXXIAIDVASALNYLHHDCQPVTAHCVLKPSNVLLDDDMTARVG 176
P + + LH D LKP N+L++ + ++
Sbjct: 95 SALTGIPLPLIKSYLFQLLQGLSFCHSHRVLHRD---------LKPQNLLINTEGAIKLA 145
Query: 177 DFGLAR-FLPPTRTQTSSIDVKGSIGYIAPEYGVG-NEVSTIGDVYSYGILLLELMIREK 234
DFGLAR F P RT T + ++ Y APE +G ST D++S G + E++ R
Sbjct: 146 DFGLARAFGVPVRTYTHEV---VTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRA 202
Query: 235 PSDIMFEGDMNLHKFAKM 252
+F GD + + ++
Sbjct: 203 ----LFPGDSEIDQLFRI 216
>pdb|3CTH|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Aminopyridine Based Inhibitor
pdb|3CTJ|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Aminopyridine Based Inhibitor
pdb|3CE3|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Pyrrolopyridinepyridone Based Inhibitor
pdb|3F82|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
N-
(4-(2-Amino-3-Chloropyridin-4-Yloxy)-3-Fluorophenyl)-4-
Ethoxy-1-(4-Fluorophenyl)-2-Oxo-1,2-Dihydropyridine-3-
Carboxamide
pdb|3L8V|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepat Growth Factor Receptor C-Met In Complex With A
Biarylamine Inhibitor
Length = 314
Score = 51.2 bits (121), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 44/180 (24%), Positives = 77/180 (42%), Gaps = 18/180 (10%)
Query: 58 GAFKSFIAECKALRNIRHRNLIKVLTACLGVDYQGNDFKALVYEFMHNRSLKEWLYPISK 117
G F+ E +++ H N++ +L CL + +V +M + L+ ++
Sbjct: 73 GEVSQFLTEGIIMKDFSHPNVLSLLGICL----RSEGSPLVVLPYMKHGDLRNFI----- 123
Query: 118 EDETYKRPXXXXXXXXXXIAIDVASALNYLHHDCQPVTAHCVLKPSNVLLDDDMTARVGD 177
+ET+ + VA + +L H L N +LD+ T +V D
Sbjct: 124 RNETHN----PTVKDLIGFGLQVAKGMKFL---ASKKFVHRDLAARNCMLDEKFTVKVAD 176
Query: 178 FGLARFLPPTRTQT--SSIDVKGSIGYIAPEYGVGNEVSTIGDVYSYGILLLELMIREKP 235
FGLAR + + + K + ++A E + +T DV+S+G+LL ELM R P
Sbjct: 177 FGLARDMYDKEFDSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAP 236
>pdb|3QTI|A Chain A, C-Met Kinase In Complex With Nvp-Bvu972
pdb|3QTI|B Chain B, C-Met Kinase In Complex With Nvp-Bvu972
Length = 314
Score = 51.2 bits (121), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 44/180 (24%), Positives = 77/180 (42%), Gaps = 18/180 (10%)
Query: 58 GAFKSFIAECKALRNIRHRNLIKVLTACLGVDYQGNDFKALVYEFMHNRSLKEWLYPISK 117
G F+ E +++ H N++ +L CL + +V +M + L+ ++
Sbjct: 73 GEVSQFLTEGIIMKDFSHPNVLSLLGICL----RSEGSPLVVLPYMKHGDLRNFI----- 123
Query: 118 EDETYKRPXXXXXXXXXXIAIDVASALNYLHHDCQPVTAHCVLKPSNVLLDDDMTARVGD 177
+ET+ + VA + +L H L N +LD+ T +V D
Sbjct: 124 RNETHN----PTVKDLIGFGLQVAKGMKFL---ASKKFVHRDLAARNCMLDEKFTVKVAD 176
Query: 178 FGLARFLPPTRTQT--SSIDVKGSIGYIAPEYGVGNEVSTIGDVYSYGILLLELMIREKP 235
FGLAR + + + K + ++A E + +T DV+S+G+LL ELM R P
Sbjct: 177 FGLARDMYDKEFDSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAP 236
>pdb|3C1X|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Pyrrolotriazine Based Inhibitor
Length = 373
Score = 51.2 bits (121), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 44/180 (24%), Positives = 77/180 (42%), Gaps = 18/180 (10%)
Query: 58 GAFKSFIAECKALRNIRHRNLIKVLTACLGVDYQGNDFKALVYEFMHNRSLKEWLYPISK 117
G F+ E +++ H N++ +L CL + +V +M + L+ ++
Sbjct: 132 GEVSQFLTEGIIMKDFSHPNVLSLLGICL----RSEGSPLVVLPYMKHGDLRNFI----- 182
Query: 118 EDETYKRPXXXXXXXXXXIAIDVASALNYLHHDCQPVTAHCVLKPSNVLLDDDMTARVGD 177
+ET+ + VA + +L H L N +LD+ T +V D
Sbjct: 183 RNETHN----PTVKDLIGFGLQVAKGMKFL---ASKKFVHRDLAARNCMLDEKFTVKVAD 235
Query: 178 FGLARFLPPTRTQT--SSIDVKGSIGYIAPEYGVGNEVSTIGDVYSYGILLLELMIREKP 235
FGLAR + + + K + ++A E + +T DV+S+G+LL ELM R P
Sbjct: 236 FGLARDMYDKEFDSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAP 295
>pdb|3DZQ|A Chain A, Human Epha3 Kinase Domain In Complex With Inhibitor
Awl-Ii- 38.3
pdb|4G2F|A Chain A, Human Epha3 Kinase Domain In Complex With Compound 7
pdb|4GK2|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 66
pdb|4GK3|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 87
pdb|4GK4|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 90
Length = 361
Score = 51.2 bits (121), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 50/192 (26%), Positives = 83/192 (43%), Gaps = 31/192 (16%)
Query: 50 GFSHLRRQGAFKSFIAECKALRNIRHRNLIK---VLTACLGVDYQGNDFKALVYEFMHNR 106
G++ +R + F+ E + H N+I+ V+T V +V E+M N
Sbjct: 72 GYTEKQR----RDFLGEASIMGQFDHPNIIRLEGVVTKSKPV--------MIVTEYMENG 119
Query: 107 SLKEWLYPISKEDETYKRPXXXXXXXXXXIAIDVASALNYLHHDCQPVTAHCVLKPSNVL 166
SL +L K D + + S + Y+H D L N+L
Sbjct: 120 SLDSFL---RKHDAQFTVIQLVGMLRGIASGMKYLSDMGYVHRD---------LAARNIL 167
Query: 167 LDDDMTARVGDFGLARFLP--PTRTQTSSIDVKGSIGYIAPEYGVGNEVSTIGDVYSYGI 224
++ ++ +V DFGL+R L P T+ K I + +PE + ++ DV+SYGI
Sbjct: 168 INSNLVCKVSDFGLSRVLEDDPEAAYTTR-GGKIPIRWTSPEAIAYRKFTSASDVWSYGI 226
Query: 225 LLLELM-IREKP 235
+L E+M E+P
Sbjct: 227 VLWEVMSYGERP 238
>pdb|2QOC|A Chain A, Human Epha3 Kinase Domain, Phosphorylated, Amp-Pnp Bound
Structure
Length = 344
Score = 51.2 bits (121), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 48/186 (25%), Positives = 80/186 (43%), Gaps = 30/186 (16%)
Query: 50 GFSHLRRQGAFKSFIAECKALRNIRHRNLIK---VLTACLGVDYQGNDFKALVYEFMHNR 106
G++ +R + F+ E + H N+I+ V+T V +V E+M N
Sbjct: 55 GYTEKQR----RDFLGEASIMGQFDHPNIIRLEGVVTKSKPV--------MIVTEYMENG 102
Query: 107 SLKEWLYPISKEDETYKRPXXXXXXXXXXIAIDVASALNYLHHDCQPVTAHCVLKPSNVL 166
SL +L K D + + S + Y+H D L N+L
Sbjct: 103 SLDSFL---RKHDAQFTVIQLVGMLRGIASGMKYLSDMGYVHRD---------LAARNIL 150
Query: 167 LDDDMTARVGDFGLARFLP--PTRTQTSSIDVKGSIGYIAPEYGVGNEVSTIGDVYSYGI 224
++ ++ +V DFGL+R L P T+ K I + +PE + ++ DV+SYGI
Sbjct: 151 INSNLVCKVSDFGLSRVLEDDPEAAYTTR-GGKIPIRWTSPEAIAYRKFTSASDVWSYGI 209
Query: 225 LLLELM 230
+L E+M
Sbjct: 210 VLWEVM 215
>pdb|1GZ8|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 2-Amino-6-(3'-Methyl-2'-Oxo)butoxypurine
pdb|2R3Q|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3M|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3I|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3N|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3O|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3P|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3K|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3J|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3L|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|1W8C|A Chain A, Co-crystal Structure Of
6-cyclohexylmethoxy-8-isopropyl-9h- Purin-2-ylamine And
Monomeric Cdk2
Length = 299
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 52/198 (26%), Positives = 90/198 (45%), Gaps = 26/198 (13%)
Query: 57 QGAFKSFIAECKALRNIRHRNLIKVLTACLGVDYQGNDFKALVYEFMHNRSLKEWLYPIS 116
+G + I E L+ + H N++K+L V + N LV+EF+H + LK+++ +
Sbjct: 43 EGVPSTAIREISLLKELNHPNIVKLL----DVIHTENKL-YLVFEFLH-QDLKKFM--DA 94
Query: 117 KEDETYKRPXXXXXXXXXXIAIDVASALNYLHHDCQPVTAHCVLKPSNVLLDDDMTARVG 176
P + + LH D LKP N+L++ + ++
Sbjct: 95 SALTGIPLPLIKSYLFQLLQGLAFCHSHRVLHRD---------LKPQNLLINTEGAIKLA 145
Query: 177 DFGLAR-FLPPTRTQTSSIDVKGSIGYIAPEYGVGNE-VSTIGDVYSYGILLLELMIREK 234
DFGLAR F P RT T + ++ Y APE +G + ST D++S G + E++ R
Sbjct: 146 DFGLARAFGVPVRTYTHEV---VTLWYRAPEILLGXKYYSTAVDIWSLGCIFAEMVTRRA 202
Query: 235 PSDIMFEGDMNLHKFAKM 252
+F GD + + ++
Sbjct: 203 ----LFPGDSEIDQLFRI 216
>pdb|2WQM|A Chain A, Structure Of Apo Human Nek7
pdb|2WQN|A Chain A, Structure Of Adp-Bound Human Nek7
Length = 310
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 35/115 (30%), Positives = 57/115 (49%), Gaps = 10/115 (8%)
Query: 138 IDVASALNYLHHDCQPVTAHCVLKPSNVLLDDDMTARVGDFGLARFLPPTRTQTSSIDVK 197
+ + SAL ++H H +KP+NV + ++GD GL RF + T++ +
Sbjct: 143 VQLCSALEHMHSR---RVMHRDIKPANVFITATGVVKLGDLGLGRFF--SSKTTAAHSLV 197
Query: 198 GSIGYIAPEYGVGNEVSTIGDVYSYGILLLELMIREKPSDIMFEGD-MNLHKFAK 251
G+ Y++PE N + D++S G LL E+ + P F GD MNL+ K
Sbjct: 198 GTPYYMSPERIHENGYNFKSDIWSLGCLLYEMAALQSP----FYGDKMNLYSLCK 248
>pdb|3Q4T|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dorsomorphin
pdb|3Q4T|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dorsomorphin
pdb|3SOC|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With A Quinazolin
pdb|3SOC|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With A Quinazolin
pdb|4ASX|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dihydro-Bauerine C
pdb|4ASX|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dihydro-Bauerine C
Length = 322
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 56/210 (26%), Positives = 94/210 (44%), Gaps = 41/210 (19%)
Query: 136 IAIDVASALNYLHHDC-------QPVTAHCVLKPSNVLLDDDMTARVGDFGLARFLPPTR 188
IA +A L YLH D +P +H +K NVLL +++TA + DFGLA +
Sbjct: 126 IAETMARGLAYLHEDIPGLKDGHKPAISHRDIKSKNVLLKNNLTACIADFGLALKFEAGK 185
Query: 189 TQTSSIDVKGSIG---YIAPEYGVG-----NEVSTIGDVYSYGILLLELMIREKPSD--- 237
S+ D G +G Y+APE G + D+Y+ G++L EL R +D
Sbjct: 186 ---SAGDTHGQVGTRRYMAPEVLEGAINFQRDAFLRIDMYAMGLVLWELASRCTAADGPV 242
Query: 238 ----IMFEGDMNLHKFAKMALSNHVKDIVDSILLNDDEKLVVRGDQKQTQAKINI----I 289
+ FE ++ H ++D+ ++++ ++ V+R D Q A + + I
Sbjct: 243 DEYMLPFEEEIGQHP--------SLEDM-QEVVVHKKKRPVLR-DYWQKHAGMAMLCETI 292
Query: 290 RECV--ISMVRIGVACSMESPQDRMKMTNV 317
EC + R+ C E ++TN+
Sbjct: 293 EECWDHDAEARLSAGCVGERITQMQRLTNI 322
>pdb|2QOI|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f:y602f
Double Mutant
Length = 373
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 48/186 (25%), Positives = 80/186 (43%), Gaps = 30/186 (16%)
Query: 50 GFSHLRRQGAFKSFIAECKALRNIRHRNLIK---VLTACLGVDYQGNDFKALVYEFMHNR 106
G++ +R + F+ E + H N+I+ V+T V +V E+M N
Sbjct: 84 GYTEKQR----RDFLGEASIMGQFDHPNIIRLEGVVTKSKPV--------MIVTEYMENG 131
Query: 107 SLKEWLYPISKEDETYKRPXXXXXXXXXXIAIDVASALNYLHHDCQPVTAHCVLKPSNVL 166
SL +L K D + + S + Y+H D L N+L
Sbjct: 132 SLDSFL---RKHDAQFTVIQLVGMLRGIASGMKYLSDMGYVHRD---------LAARNIL 179
Query: 167 LDDDMTARVGDFGLARFLP--PTRTQTSSIDVKGSIGYIAPEYGVGNEVSTIGDVYSYGI 224
++ ++ +V DFGL+R L P T+ K I + +PE + ++ DV+SYGI
Sbjct: 180 INSNLVCKVSDFGLSRVLEDDPEAAYTTR-GGKIPIRWTSPEAIAYRKFTSASDVWSYGI 238
Query: 225 LLLELM 230
+L E+M
Sbjct: 239 VLWEVM 244
>pdb|4ERW|A Chain A, Cdk2 In Complex With Staurosporine
Length = 306
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 52/198 (26%), Positives = 90/198 (45%), Gaps = 26/198 (13%)
Query: 57 QGAFKSFIAECKALRNIRHRNLIKVLTACLGVDYQGNDFKALVYEFMHNRSLKEWLYPIS 116
+G + I E L+ + H N++K+L V + N LV+EF+H + LK+++ +
Sbjct: 50 EGVPSTAIREISLLKELNHPNIVKLL----DVIHTENKL-YLVFEFLH-QDLKKFM--DA 101
Query: 117 KEDETYKRPXXXXXXXXXXIAIDVASALNYLHHDCQPVTAHCVLKPSNVLLDDDMTARVG 176
P + + LH D LKP N+L++ + ++
Sbjct: 102 SALTGIPLPLIKSYLFQLLQGLAFCHSHRVLHRD---------LKPQNLLINTEGAIKLA 152
Query: 177 DFGLAR-FLPPTRTQTSSIDVKGSIGYIAPEYGVGNE-VSTIGDVYSYGILLLELMIREK 234
DFGLAR F P RT T + ++ Y APE +G + ST D++S G + E++ R
Sbjct: 153 DFGLARAFGVPVRTYTHEV---VTLWYRAPEILLGXKYYSTAVDIWSLGCIFAEMVTRRA 209
Query: 235 PSDIMFEGDMNLHKFAKM 252
+F GD + + ++
Sbjct: 210 ----LFPGDSEIDQLFRI 223
>pdb|3QD2|B Chain B, Crsytal Structure Of Mouse Perk Kinase Domain
Length = 332
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 34/105 (32%), Positives = 48/105 (45%), Gaps = 13/105 (12%)
Query: 136 IAIDVASALNYLHHDCQPVTAHCVLKPSNVLLDDDMTARVGDFGLA----------RFLP 185
I I +A A+ +LH H LKPSN+ D +VGDFGL L
Sbjct: 169 IFIQIAEAVEFLHSKG---LMHRDLKPSNIFFTMDDVVKVGDFGLVTAMDQDEEEQTVLT 225
Query: 186 PTRTQTSSIDVKGSIGYIAPEYGVGNEVSTIGDVYSYGILLLELM 230
P + G+ Y++PE GN S D++S G++L EL+
Sbjct: 226 PMPAYATHXGQVGTKLYMSPEQIHGNNYSHKVDIFSLGLILFELL 270
>pdb|3UIU|A Chain A, Crystal Structure Of Apo-Pkr Kinase Domain
pdb|3UIU|B Chain B, Crystal Structure Of Apo-Pkr Kinase Domain
Length = 306
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 29/91 (31%), Positives = 47/91 (51%), Gaps = 6/91 (6%)
Query: 140 VASALNYLHHDCQPVTAHCVLKPSNVLLDDDMTARVGDFGLARFLPPTRTQTSSIDVKGS 199
+ ++Y+H H LKPSN+ L D ++GDFGL L +T S KG+
Sbjct: 145 ITKGVDYIH---SKKLIHRDLKPSNIFLVDTKQVKIGDFGLVTSLKNDGKRTRS---KGT 198
Query: 200 IGYIAPEYGVGNEVSTIGDVYSYGILLLELM 230
+ Y++PE + D+Y+ G++L EL+
Sbjct: 199 LRYMSPEQISSQDYGKEVDLYALGLILAELL 229
>pdb|2W17|A Chain A, Cdk2 In Complex With The Imidazole Pyrimidine Amide,
Compound (S)-8b
pdb|3IG7|A Chain A, Novel Cdk-5 Inhibitors - Crystal Structure Of Inhibitor
Efp With Cdk-2
pdb|3IGG|A Chain A, Novel Cdk-5 Inhibitors - Crystal Structure Of Inhibitor
Efq With Cdk-2
pdb|1B38|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|1B39|A Chain A, Human Cyclin-Dependent Kinase 2 Phosphorylated On Thr 160
pdb|1E1V|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Nu2058
pdb|1E1X|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Nu6027
pdb|1H00|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1H07|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1H08|A Chain A, Cdk2 In Complex With A Disubstituted 2, 4-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|2R3R|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|4ACM|A Chain A, Cdk2 In Complex With
3-Amino-6-(4-{[2-(Dimethylamino)ethyl]
Sulfamoyl}-Phenyl)-N-Pyridin-3-Ylpyrazine-2-Carboxamide
pdb|3SW4|A Chain A, Crystal Structure Of The Cdk2 In Complex With
Thiazolylpyrimidine Inhibitor
pdb|3SW7|A Chain A, Crystal Structure Of The Cdk2 In Complex With
Thiazolylpyrimidine Inhibitor
pdb|1OIQ|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-Dependent Kinase Inhibitors Identified Through
Structure-Based Hybridisation
pdb|1V1K|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1URW|A Chain A, Cdk2 In Complex With An Imidazo[1,2-B]pyridazine
pdb|2VV9|A Chain A, Cdk2 In Complex With An Imidazole Piperazine
pdb|2W06|A Chain A, Structure Of Cdk2 In Complex With An Imidazolyl
Pyrimidine, Compound 5c
pdb|2R3G|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3H|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3F|A Chain A, Crystal Structure Of Cyclin-dependent Kinase 2 With
Inhibitor
Length = 299
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 52/198 (26%), Positives = 89/198 (44%), Gaps = 26/198 (13%)
Query: 57 QGAFKSFIAECKALRNIRHRNLIKVLTACLGVDYQGNDFKALVYEFMHNRSLKEWLYPIS 116
+G + I E L+ + H N++K+L V + N LV+EF+H + LK+++ +
Sbjct: 43 EGVPSTAIREISLLKELNHPNIVKLL----DVIHTENKL-YLVFEFLH-QDLKKFM--DA 94
Query: 117 KEDETYKRPXXXXXXXXXXIAIDVASALNYLHHDCQPVTAHCVLKPSNVLLDDDMTARVG 176
P + + LH D LKP N+L++ + ++
Sbjct: 95 SALTGIPLPLIKSYLFQLLQGLAFCHSHRVLHRD---------LKPQNLLINTEGAIKLA 145
Query: 177 DFGLAR-FLPPTRTQTSSIDVKGSIGYIAPEYGVG-NEVSTIGDVYSYGILLLELMIREK 234
DFGLAR F P RT T + ++ Y APE +G ST D++S G + E++ R
Sbjct: 146 DFGLARAFGVPVRTYTHEV---VTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRA 202
Query: 235 PSDIMFEGDMNLHKFAKM 252
+F GD + + ++
Sbjct: 203 ----LFPGDSEIDQLFRI 216
>pdb|1PF8|A Chain A, Crystal Structure Of Human Cyclin-dependent Kinase 2
Complexed With A Nucleoside Inhibitor
Length = 298
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 52/198 (26%), Positives = 89/198 (44%), Gaps = 26/198 (13%)
Query: 57 QGAFKSFIAECKALRNIRHRNLIKVLTACLGVDYQGNDFKALVYEFMHNRSLKEWLYPIS 116
+G + I E L+ + H N++K+L V + N LV+EF+H + LK+++ +
Sbjct: 42 EGVPSTAIREISLLKELNHPNIVKLL----DVIHTENKL-YLVFEFLH-QDLKKFM--DA 93
Query: 117 KEDETYKRPXXXXXXXXXXIAIDVASALNYLHHDCQPVTAHCVLKPSNVLLDDDMTARVG 176
P + + LH D LKP N+L++ + ++
Sbjct: 94 SALTGIPLPLIKSYLFQLLQGLAFCHSHRVLHRD---------LKPQNLLINTEGAIKLA 144
Query: 177 DFGLAR-FLPPTRTQTSSIDVKGSIGYIAPEYGVG-NEVSTIGDVYSYGILLLELMIREK 234
DFGLAR F P RT T + ++ Y APE +G ST D++S G + E++ R
Sbjct: 145 DFGLARAFGVPVRTYTHEV---VTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRA 201
Query: 235 PSDIMFEGDMNLHKFAKM 252
+F GD + + ++
Sbjct: 202 ----LFPGDSEIDQLFRI 215
>pdb|2QOF|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f Mutant
Length = 373
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 48/186 (25%), Positives = 80/186 (43%), Gaps = 30/186 (16%)
Query: 50 GFSHLRRQGAFKSFIAECKALRNIRHRNLIK---VLTACLGVDYQGNDFKALVYEFMHNR 106
G++ +R + F+ E + H N+I+ V+T V +V E+M N
Sbjct: 84 GYTEKQR----RDFLGEASIMGQFDHPNIIRLEGVVTKSKPV--------MIVTEYMENG 131
Query: 107 SLKEWLYPISKEDETYKRPXXXXXXXXXXIAIDVASALNYLHHDCQPVTAHCVLKPSNVL 166
SL +L K D + + S + Y+H D L N+L
Sbjct: 132 SLDSFL---RKHDAQFTVIQLVGMLRGIASGMKYLSDMGYVHRD---------LAARNIL 179
Query: 167 LDDDMTARVGDFGLARFLP--PTRTQTSSIDVKGSIGYIAPEYGVGNEVSTIGDVYSYGI 224
++ ++ +V DFGL+R L P T+ K I + +PE + ++ DV+SYGI
Sbjct: 180 INSNLVCKVSDFGLSRVLEDDPEAAYTTR-GGKIPIRWTSPEAIAYRKFTSASDVWSYGI 238
Query: 225 LLLELM 230
+L E+M
Sbjct: 239 VLWEVM 244
>pdb|2QOD|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y602f Mutant
Length = 373
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 48/186 (25%), Positives = 80/186 (43%), Gaps = 30/186 (16%)
Query: 50 GFSHLRRQGAFKSFIAECKALRNIRHRNLIK---VLTACLGVDYQGNDFKALVYEFMHNR 106
G++ +R + F+ E + H N+I+ V+T V +V E+M N
Sbjct: 84 GYTEKQR----RDFLGEASIMGQFDHPNIIRLEGVVTKSKPV--------MIVTEYMENG 131
Query: 107 SLKEWLYPISKEDETYKRPXXXXXXXXXXIAIDVASALNYLHHDCQPVTAHCVLKPSNVL 166
SL +L K D + + S + Y+H D L N+L
Sbjct: 132 SLDSFL---RKHDAQFTVIQLVGMLRGIASGMKYLSDMGYVHRD---------LAARNIL 179
Query: 167 LDDDMTARVGDFGLARFLP--PTRTQTSSIDVKGSIGYIAPEYGVGNEVSTIGDVYSYGI 224
++ ++ +V DFGL+R L P T+ K I + +PE + ++ DV+SYGI
Sbjct: 180 INSNLVCKVSDFGLSRVLEDDPEAAYTTR-GGKIPIRWTSPEAIAYRKFTSASDVWSYGI 238
Query: 225 LLLELM 230
+L E+M
Sbjct: 239 VLWEVM 244
>pdb|1FIN|A Chain A, Cyclin A-Cyclin-Dependent Kinase 2 Complex
pdb|1FIN|C Chain C, Cyclin A-Cyclin-Dependent Kinase 2 Complex
pdb|1CKP|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Purvalanol B
pdb|1BUH|A Chain A, Crystal Structure Of The Human Cdk2 Kinase Complex With
Cell Cycle-Regulatory Protein Ckshs1
pdb|1DM2|A Chain A, Human Cyclin-Dependent Kinase 2 Complexed With The
Inhibitor Hymenialdisine
pdb|1DI8|A Chain A, The Structure Of Cyclin-Dependent Kinase 2 (Cdk2) In
Complex With
4-[3-Hydroxyanilino]-6,7-Dimethoxyquinazoline
pdb|1F5Q|A Chain A, Crystal Structure Of Murine Gamma Herpesvirus Cyclin
Complexed To Human Cyclin Dependent Kinase 2
pdb|1F5Q|C Chain C, Crystal Structure Of Murine Gamma Herpesvirus Cyclin
Complexed To Human Cyclin Dependent Kinase 2
pdb|1FVT|A Chain A, The Structure Of Cyclin-Dependent Kinase 2 (Cdk2) In
Complex With An Oxindole Inhibitor
pdb|1FVV|A Chain A, The Structure Of Cdk2CYCLIN A IN COMPLEX WITH AN OXINDOLE
Inhibitor
pdb|1FVV|C Chain C, The Structure Of Cdk2CYCLIN A IN COMPLEX WITH AN OXINDOLE
Inhibitor
pdb|1JSV|A Chain A, The Structure Of Cyclin-dependent Kinase 2 (cdk2) In
Complex With 4-[(6-amino-4-pyrimidinyl)
Amino]benzenesulfonamide
pdb|1G5S|A Chain A, Crystal Structure Of Human Cyclin Dependent Kinase 2
(Cdk2) In Complex With The Inhibitor H717
pdb|1JVP|P Chain P, Crystal Structure Of Human Cdk2 (Unphosphorylated) In
Complex With Pkf049-365
pdb|1GIH|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|1KE5|A Chain A, Cdk2 Complexed With N-methyl-4-{[(2-oxo-1,2-dihydro-3h-
Indol-3-ylidene)methyl]amino}benzenesulfonamide
pdb|1KE6|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With
N-Methyl-{4-
[2-(7-Oxo-6,7-Dihydro-8h-[1,3]thiazolo[5,4-E]indol-8-
Ylidene)hydrazino]phenyl}methanesulfonamide
pdb|1KE7|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With 3-{[(2,2-
Dioxido-1,
3-Dihydro-2-Benzothien-5-Yl)amino]methylene}-5-
(1,3-Oxazol-5-Yl)-1,3-Dihydro-2h-Indol-2-One
pdb|1KE8|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With
4-{[(2-Oxo-
1,2-Dihydro-3h-Indol-3-Ylidene)methyl]amino}-N-(1,3-
Thiazol-2-Yl)benzenesulfonamide
pdb|1KE9|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With 3-{[4-
({[amino(Imino)methyl]aminosulfonyl)anilino]methylene}-
2- Oxo-2,3-Dihydro-1h-Indole
pdb|1H0V|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor
2-Amino-6-[(R)-Pyrrolidino-5'-Yl]methoxypurine
pdb|1H0W|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 2-Amino-6-[cyclohex-3-Enyl]methoxypurine
pdb|1P2A|A Chain A, The Structure Of Cyclin Dependent Kinase 2 (Ckd2) With A
Trisubstituted Naphthostyril Inhibitor
pdb|1OKV|A Chain A, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Ile-Phe-Nh2
pdb|1OKV|C Chain C, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Ile-Phe-Nh2
pdb|1OKW|A Chain A, Cyclin A Binding Groove Inhibitor
Ac-Arg-Arg-Leu-Asn-(M-Cl-Phe)-Nh2
pdb|1OKW|C Chain C, Cyclin A Binding Groove Inhibitor
Ac-Arg-Arg-Leu-Asn-(M-Cl-Phe)-Nh2
pdb|1OL1|A Chain A, Cyclin A Binding Groove Inhibitor
H-Cit-Cit-Leu-Ile-(P-F-Phe)-Nh2
pdb|1OL1|C Chain C, Cyclin A Binding Groove Inhibitor
H-Cit-Cit-Leu-Ile-(P-F-Phe)-Nh2
pdb|1OL2|A Chain A, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Asn-(P-F-Phe)-Nh2
pdb|1OL2|C Chain C, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Asn-(P-F-Phe)-Nh2
pdb|1PW2|A Chain A, Apo Structure Of Human Cyclin-Dependent Kinase 2
pdb|1PXI|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 4-(2,5-dichloro-thiophen-3-yl)-pyrimidin-2-
Ylamine
pdb|1PXJ|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-Ylamine
pdb|1PXK|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
N-[4-(2,4-dimethyl-thiazol-5-yl)pyrimidin-2-yl]-
N'-hydroxyiminoformamide
pdb|1PXL|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
[4-(2,4-dimethyl-thiazol-5-yl)-pyrimidin-2-yl]-
(4-trifluoromethyl-phenyl)-amine
pdb|1R78|A Chain A, Cdk2 Complex With A 4-alkynyl Oxindole Inhibitor
pdb|1PXM|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 3-[4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-
Ylamino]-Phenol
pdb|1PXN|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 4-[4-(4-Methyl-2-Methylamino-Thiazol-5-Yl)-
Pyrimidin-2-Ylamino]-Phenol
pdb|1PXO|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
[4-(2-Amino-4-Methyl-Thiazol-5-Yl)-Pyrimidin-2-
Yl]-(3-Nitro-Phenyl)-Amine
pdb|1PXP|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
N-[4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-Yl]-
N',N'-Dimethyl-Benzene-1,4-Diamine
pdb|1VYZ|A Chain A, Structure Of Cdk2 Complexed With Pnu-181227
pdb|1PYE|A Chain A, Crystal Structure Of Cdk2 With Inhibitor
pdb|1URC|A Chain A, Cyclin A Binding Groove Inhibitor Ace-Arg-Lys-Leu- Phe-Gly
pdb|1URC|C Chain C, Cyclin A Binding Groove Inhibitor Ace-Arg-Lys-Leu- Phe-Gly
pdb|1W0X|C Chain C, Crystals Structure Of Human Cdk2 In Complex With The
Inhibitor Olomoucine.
pdb|1WCC|A Chain A, Screening For Fragment Binding By X-Ray Crystallography
pdb|1Y8Y|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Pyrazolo[1, 5-A]pyrimidine Inhibitor
pdb|1Y91|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Pyrazolo[1, 5-A]pyrimidine Inhibitor
pdb|2BHE|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 5-Bromo-Indirubine
pdb|2BHH|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 4-Hydroxypiperindinesulfonyl-Indirubine
pdb|2B52|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With Dph-
042562
pdb|2B53|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With Din-
234325
pdb|2B54|A Chain A, Human Cyclin Dependent Kinase 2 (Ckd2)complexed With Din-
232305
pdb|2B55|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With
Indenopyraxole Din-101312
pdb|2BTR|A Chain A, Structure Of Cdk2 Complexed With Pnu-198873
pdb|2BTS|A Chain A, Structure Of Cdk2 Complexed With Pnu-230032
pdb|2C68|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C69|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6I|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6K|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6L|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6M|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6O|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2EXM|A Chain A, Human Cdk2 In Complex With Isopentenyladenine
pdb|1YKR|A Chain A, Crystal Structure Of Cdk2 With An Aminoimidazo Pyridine
Inhibitor
pdb|2A0C|X Chain X, Human Cdk2 In Complex With Olomoucine Ii, A Novel 2,6,9-
Trisubstituted Purine Cyclin-Dependent Kinase Inhibitor
pdb|2C5N|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5N|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5O|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5O|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5V|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5V|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5X|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5X|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5Y|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2A4L|A Chain A, Human Cyclin-Dependent Kinase 2 In Complex With
Roscovitine
pdb|2FVD|A Chain A, Cyclin Dependent Kinase 2 (Cdk2) With Diaminopyrimidine
Inhibitor
pdb|2I40|A Chain A, Cdk2CYCLIN A COMPLEXED WITH A THIOPHENE CARBOXAMIDE
INHIBITOR
pdb|2I40|C Chain C, Cdk2CYCLIN A COMPLEXED WITH A THIOPHENE CARBOXAMIDE
INHIBITOR
pdb|2CLX|A Chain A, 4-Arylazo-3,5-Diamino-1h-Pyrazole Cdk Inhibitors: Sar
Study, Crystal Structure In Complex With Cdk2,
Selectivity, And Cellular Effects
pdb|2DUV|A Chain A, Structure Of Cdk2 With A 3-Hydroxychromones
pdb|2UUE|A Chain A, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2UUE|C Chain C, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2UZN|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZO|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2V0D|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|1AQ1|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Staurosporine
pdb|1HCK|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|1HCL|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|2J9M|A Chain A, Crystal Structure Of Cdk2 In Complex With Macrocyclic
Aminopyrimidine
pdb|2V22|A Chain A, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2V22|C Chain C, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2VTA|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTH|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design
pdb|2VTI|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTJ|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTL|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTM|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTN|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTO|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTP|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTQ|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTR|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTS|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTT|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VU3|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2R64|A Chain A, Crystal Structure Of A 3-Aminoindazole Compound With Cdk2
pdb|2W05|A Chain A, Structure Of Cdk2 In Complex With An Imidazolyl
Pyrimidine, Compound 5b
pdb|3EID|A Chain A, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EID|C Chain C, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EJ1|A Chain A, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EJ1|C Chain C, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EOC|A Chain A, Cdk2/cyclina Complexed With A Imidazo Triazin-2-amine
pdb|3EOC|C Chain C, Cdk2/cyclina Complexed With A Imidazo Triazin-2-amine
pdb|2W1H|A Chain A, Fragment-Based Discovery Of The Pyrazol-4-Yl Urea
(At9283), A Multi-Targeted Kinase Inhibitor With Potent
Aurora Kinase Activity
pdb|3F5X|A Chain A, Cdk-2-Cyclin Complex With Indazole Inhibitor 9 Bound At
Its Active Site
pdb|3F5X|C Chain C, Cdk-2-Cyclin Complex With Indazole Inhibitor 9 Bound At
Its Active Site
pdb|3FZ1|A Chain A, Crystal Structure Of A Benzthiophene Inhibitor Bound To
Human Cyclin-Dependent Kinase-2 (Cdk-2)
pdb|2WEV|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WEV|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WFY|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WFY|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WHB|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WHB|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2X1N|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2X1N|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|3LFN|A Chain A, Crystal Structure Of Cdk2 With Sar57, An Aminoindazole
Type Inhibitor
pdb|3LFQ|A Chain A, Crystal Structure Of Cdk2 With Sar60, An Aminoindazole
Type Inhibitor
pdb|3LFS|A Chain A, Crystal Structure Of Cdk2 With Sar37, An Aminoindazole
Type Inhibitor
pdb|2XMY|A Chain A, Discovery And Characterisation Of
2-Anilino-4-(Thiazol-5-Yl) Pyrimidine Transcriptional
Cdk Inhibitors As Anticancer Agents
pdb|2XNB|A Chain A, Discovery And Characterisation Of
2-Anilino-4-(Thiazol-5-Yl) Pyrimidine Transcriptional
Cdk Inhibitors As Anticancer Agents
pdb|3LE6|A Chain A, The Structure Of Cyclin Dependent Kinase 2 (Ckd2) With A
Pyrazolobenzodiazepine Inhibitor
pdb|3NS9|A Chain A, Crystal Structure Of Cdk2 In Complex With Inhibitor Bs-194
pdb|3S2P|A Chain A, Crystal Structure Of Cdk2 With A 2-Aminopyrimidine
Compound
pdb|3UNJ|A Chain A, Cdk2 In Complex With Inhibitor Yl1-038-31
pdb|3UNK|A Chain A, Cdk2 In Complex With Inhibitor Yl5-083
pdb|3TI1|A Chain A, Cdk2 In Complex With Sunitinib
pdb|3TIY|A Chain A, Cdk2 In Complex With Nsc 35676
pdb|3TIZ|A Chain A, Cdk2 In Complex With Nsc 111848
Length = 298
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 52/198 (26%), Positives = 89/198 (44%), Gaps = 26/198 (13%)
Query: 57 QGAFKSFIAECKALRNIRHRNLIKVLTACLGVDYQGNDFKALVYEFMHNRSLKEWLYPIS 116
+G + I E L+ + H N++K+L V + N LV+EF+H + LK+++ +
Sbjct: 42 EGVPSTAIREISLLKELNHPNIVKLL----DVIHTENKL-YLVFEFLH-QDLKKFM--DA 93
Query: 117 KEDETYKRPXXXXXXXXXXIAIDVASALNYLHHDCQPVTAHCVLKPSNVLLDDDMTARVG 176
P + + LH D LKP N+L++ + ++
Sbjct: 94 SALTGIPLPLIKSYLFQLLQGLAFCHSHRVLHRD---------LKPQNLLINTEGAIKLA 144
Query: 177 DFGLAR-FLPPTRTQTSSIDVKGSIGYIAPEYGVG-NEVSTIGDVYSYGILLLELMIREK 234
DFGLAR F P RT T + ++ Y APE +G ST D++S G + E++ R
Sbjct: 145 DFGLARAFGVPVRTYTHEV---VTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRA 201
Query: 235 PSDIMFEGDMNLHKFAKM 252
+F GD + + ++
Sbjct: 202 ----LFPGDSEIDQLFRI 215
>pdb|1OIR|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-Dependent Kinase Inhibitors Identified Through
Structure-Based Hybridisation
Length = 299
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 52/198 (26%), Positives = 89/198 (44%), Gaps = 26/198 (13%)
Query: 57 QGAFKSFIAECKALRNIRHRNLIKVLTACLGVDYQGNDFKALVYEFMHNRSLKEWLYPIS 116
+G + I E L+ + H N++K+L V + N LV+EF+H + LK+++ +
Sbjct: 43 EGVPSTAIREISLLKELNHPNIVKLL----DVIHTENKL-YLVFEFLH-QDLKKFM--DA 94
Query: 117 KEDETYKRPXXXXXXXXXXIAIDVASALNYLHHDCQPVTAHCVLKPSNVLLDDDMTARVG 176
P + + LH D LKP N+L++ + ++
Sbjct: 95 SALTGIPLPLIKSYLFQLLQGLAFCHSHRVLHRD---------LKPQNLLINTEGAIKLA 145
Query: 177 DFGLAR-FLPPTRTQTSSIDVKGSIGYIAPEYGVG-NEVSTIGDVYSYGILLLELMIREK 234
DFGLAR F P RT T + ++ Y APE +G ST D++S G + E++ R
Sbjct: 146 DFGLARAFGVPVRTYTHEV---VTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRA 202
Query: 235 PSDIMFEGDMNLHKFAKM 252
+F GD + + ++
Sbjct: 203 ----LFPGDSEIDQLFRI 216
>pdb|1H01|A Chain A, Cdk2 In Complex With A Disubstituted 2, 4-Bis Anilino
Pyrimidine Cdk4 Inhibitor
Length = 298
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 52/198 (26%), Positives = 89/198 (44%), Gaps = 26/198 (13%)
Query: 57 QGAFKSFIAECKALRNIRHRNLIKVLTACLGVDYQGNDFKALVYEFMHNRSLKEWLYPIS 116
+G + I E L+ + H N++K+L V + N LV+EF+H + LK+++ +
Sbjct: 42 EGVPSTAIREISLLKELNHPNIVKLL----DVIHTENKL-YLVFEFLH-QDLKKFM--DA 93
Query: 117 KEDETYKRPXXXXXXXXXXIAIDVASALNYLHHDCQPVTAHCVLKPSNVLLDDDMTARVG 176
P + + LH D LKP N+L++ + ++
Sbjct: 94 SALTGIPLPLIKSYLFQLLQGLAFCHSHRVLHRD---------LKPQNLLINTEGAIKLA 144
Query: 177 DFGLAR-FLPPTRTQTSSIDVKGSIGYIAPEYGVG-NEVSTIGDVYSYGILLLELMIREK 234
DFGLAR F P RT T + ++ Y APE +G ST D++S G + E++ R
Sbjct: 145 DFGLARAFGVPVRTYTHEV---VTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRA 201
Query: 235 PSDIMFEGDMNLHKFAKM 252
+F GD + + ++
Sbjct: 202 ----LFPGDSEIDQLFRI 215
>pdb|3PJ8|A Chain A, Structure Of Cdk2 In Complex With A
Pyrazolo[4,3-D]pyrimidine Bioisostere Of Roscovitine
Length = 299
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 52/198 (26%), Positives = 89/198 (44%), Gaps = 26/198 (13%)
Query: 57 QGAFKSFIAECKALRNIRHRNLIKVLTACLGVDYQGNDFKALVYEFMHNRSLKEWLYPIS 116
+G + I E L+ + H N++K+L V + N LV+EF+H + LK+++ +
Sbjct: 43 EGVPSTAIREISLLKELNHPNIVKLL----DVIHTENKL-YLVFEFLH-QDLKKFM--DA 94
Query: 117 KEDETYKRPXXXXXXXXXXIAIDVASALNYLHHDCQPVTAHCVLKPSNVLLDDDMTARVG 176
P + + LH D LKP N+L++ + ++
Sbjct: 95 SALTGIPLPLIKSYLFQLLQGLAFCHSHRVLHRD---------LKPQNLLINTEGAIKLA 145
Query: 177 DFGLAR-FLPPTRTQTSSIDVKGSIGYIAPEYGVG-NEVSTIGDVYSYGILLLELMIREK 234
DFGLAR F P RT T + ++ Y APE +G ST D++S G + E++ R
Sbjct: 146 DFGLARAFGVPVRTYTHEV---VTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRA 202
Query: 235 PSDIMFEGDMNLHKFAKM 252
+F GD + + ++
Sbjct: 203 ----LFPGDSEIDQLFRI 216
>pdb|3FXX|A Chain A, Human Epha3 Kinase And Juxtamembrane Region Bound To
Substrate Kqwdnye[ptyr]iw
pdb|3FY2|A Chain A, Human Epha3 Kinase And Juxtamembrane Region Bound To
Substrate Kqwdnyefiw
Length = 371
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 48/186 (25%), Positives = 80/186 (43%), Gaps = 30/186 (16%)
Query: 50 GFSHLRRQGAFKSFIAECKALRNIRHRNLIK---VLTACLGVDYQGNDFKALVYEFMHNR 106
G++ +R + F+ E + H N+I+ V+T V +V E+M N
Sbjct: 82 GYTEKQR----RDFLGEASIMGQFDHPNIIRLEGVVTKSKPV--------MIVTEYMENG 129
Query: 107 SLKEWLYPISKEDETYKRPXXXXXXXXXXIAIDVASALNYLHHDCQPVTAHCVLKPSNVL 166
SL +L K D + + S + Y+H D L N+L
Sbjct: 130 SLDSFL---RKHDAQFTVIQLVGMLRGIASGMKYLSDMGYVHRD---------LAARNIL 177
Query: 167 LDDDMTARVGDFGLARFLP--PTRTQTSSIDVKGSIGYIAPEYGVGNEVSTIGDVYSYGI 224
++ ++ +V DFGL+R L P T+ K I + +PE + ++ DV+SYGI
Sbjct: 178 INSNLVCKVSDFGLSRVLEDDPEAAYTTR-GGKIPIRWTSPEAIAYRKFTSASDVWSYGI 236
Query: 225 LLLELM 230
+L E+M
Sbjct: 237 VLWEVM 242
>pdb|2QOL|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596:y602:s768g Triple Mutant
Length = 373
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 48/186 (25%), Positives = 79/186 (42%), Gaps = 30/186 (16%)
Query: 50 GFSHLRRQGAFKSFIAECKALRNIRHRNLIK---VLTACLGVDYQGNDFKALVYEFMHNR 106
G++ +R + F+ E + H N+I+ V+T V +V E+M N
Sbjct: 84 GYTEKQR----RDFLGEASIMGQFDHPNIIRLEGVVTKSKPV--------MIVTEYMENG 131
Query: 107 SLKEWLYPISKEDETYKRPXXXXXXXXXXIAIDVASALNYLHHDCQPVTAHCVLKPSNVL 166
SL +L K D + + S + Y+H D L N+L
Sbjct: 132 SLDSFL---RKHDAQFTVIQLVGMLRGIASGMKYLSDMGYVHRD---------LAARNIL 179
Query: 167 LDDDMTARVGDFGLARFLP--PTRTQTSSIDVKGSIGYIAPEYGVGNEVSTIGDVYSYGI 224
++ ++ +V DFGL R L P T+ K I + +PE + ++ DV+SYGI
Sbjct: 180 INSNLVCKVSDFGLGRVLEDDPEAAYTTR-GGKIPIRWTSPEAIAYRKFTSASDVWSYGI 238
Query: 225 LLLELM 230
+L E+M
Sbjct: 239 VLWEVM 244
>pdb|2GSF|A Chain A, The Human Epha3 Receptor Tyrosine Kinase And Juxtamembrane
Region
pdb|2QO2|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Dephosphorylated, Apo Structure
pdb|2QO9|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Phosphorylated, Amp-pnp Bound
Length = 373
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 48/186 (25%), Positives = 80/186 (43%), Gaps = 30/186 (16%)
Query: 50 GFSHLRRQGAFKSFIAECKALRNIRHRNLIK---VLTACLGVDYQGNDFKALVYEFMHNR 106
G++ +R + F+ E + H N+I+ V+T V +V E+M N
Sbjct: 84 GYTEKQR----RDFLGEASIMGQFDHPNIIRLEGVVTKSKPV--------MIVTEYMENG 131
Query: 107 SLKEWLYPISKEDETYKRPXXXXXXXXXXIAIDVASALNYLHHDCQPVTAHCVLKPSNVL 166
SL +L K D + + S + Y+H D L N+L
Sbjct: 132 SLDSFL---RKHDAQFTVIQLVGMLRGIASGMKYLSDMGYVHRD---------LAARNIL 179
Query: 167 LDDDMTARVGDFGLARFLP--PTRTQTSSIDVKGSIGYIAPEYGVGNEVSTIGDVYSYGI 224
++ ++ +V DFGL+R L P T+ K I + +PE + ++ DV+SYGI
Sbjct: 180 INSNLVCKVSDFGLSRVLEDDPEAAYTTR-GGKIPIRWTSPEAIAYRKFTSASDVWSYGI 238
Query: 225 LLLELM 230
+L E+M
Sbjct: 239 VLWEVM 244
>pdb|3EZR|A Chain A, Cdk-2 With Indazole Inhibitor 17 Bound At Its Active Site
pdb|3EZV|A Chain A, Cdk-2 With Indazole Inhibitor 9 Bound At Its Active Site
Length = 300
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 52/198 (26%), Positives = 89/198 (44%), Gaps = 26/198 (13%)
Query: 57 QGAFKSFIAECKALRNIRHRNLIKVLTACLGVDYQGNDFKALVYEFMHNRSLKEWLYPIS 116
+G + I E L+ + H N++K+L V + N LV+EF+H + LK+++ +
Sbjct: 44 EGVPSTAIREISLLKELNHPNIVKLL----DVIHTENKL-YLVFEFLH-QDLKKFM--DA 95
Query: 117 KEDETYKRPXXXXXXXXXXIAIDVASALNYLHHDCQPVTAHCVLKPSNVLLDDDMTARVG 176
P + + LH D LKP N+L++ + ++
Sbjct: 96 SALTGIPLPLIKSYLFQLLQGLAFCHSHRVLHRD---------LKPQNLLINTEGAIKLA 146
Query: 177 DFGLAR-FLPPTRTQTSSIDVKGSIGYIAPEYGVG-NEVSTIGDVYSYGILLLELMIREK 234
DFGLAR F P RT T + ++ Y APE +G ST D++S G + E++ R
Sbjct: 147 DFGLARAFGVPVRTYTHEV---VTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRA 203
Query: 235 PSDIMFEGDMNLHKFAKM 252
+F GD + + ++
Sbjct: 204 ----LFPGDSEIDQLFRI 217
>pdb|1VYW|A Chain A, Structure Of Cdk2CYCLIN A WITH PNU-292137
pdb|1VYW|C Chain C, Structure Of Cdk2CYCLIN A WITH PNU-292137
pdb|2C4G|A Chain A, Structure Of Cdk2-Cyclin A With Pha-533514
pdb|2C4G|C Chain C, Structure Of Cdk2-Cyclin A With Pha-533514
pdb|2BPM|A Chain A, Structure Of Cdk2-Cyclin A With Pha-630529
pdb|2BPM|C Chain C, Structure Of Cdk2-Cyclin A With Pha-630529
pdb|2BKZ|A Chain A, Structure Of Cdk2-Cyclin A With Pha-404611
pdb|2BKZ|C Chain C, Structure Of Cdk2-Cyclin A With Pha-404611
pdb|2WIH|A Chain A, Structure Of Cdk2-Cyclin A With Pha-848125
pdb|2WIH|C Chain C, Structure Of Cdk2-Cyclin A With Pha-848125
pdb|2WIP|A Chain A, Structure Of Cdk2-Cyclin A Complexed With 8-Anilino-1-
Methyl-4,5-Dihydro-1h-Pyrazolo[4,3-H] Quinazoline-3-
Carboxylic Acid
pdb|2WIP|C Chain C, Structure Of Cdk2-Cyclin A Complexed With 8-Anilino-1-
Methyl-4,5-Dihydro-1h-Pyrazolo[4,3-H] Quinazoline-3-
Carboxylic Acid
pdb|2WPA|A Chain A, Optimisation Of 6,6-Dimethyl Pyrrolo 3,4-C Pyrazoles:
Identification Of Pha-793887, A Potent Cdk Inhibitor
Suitable For Intravenous Dosing
pdb|2WPA|C Chain C, Optimisation Of 6,6-Dimethyl Pyrrolo 3,4-C Pyrazoles:
Identification Of Pha-793887, A Potent Cdk Inhibitor
Suitable For Intravenous Dosing
pdb|2WXV|A Chain A, Structure Of Cdk2-Cyclin A With A Pyrazolo(4,3-H)
Quinazoline-3-Carboxamide Inhibitor
pdb|2WXV|C Chain C, Structure Of Cdk2-Cyclin A With A Pyrazolo(4,3-H)
Quinazoline-3-Carboxamide Inhibitor
Length = 309
Score = 50.4 bits (119), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 52/198 (26%), Positives = 89/198 (44%), Gaps = 26/198 (13%)
Query: 57 QGAFKSFIAECKALRNIRHRNLIKVLTACLGVDYQGNDFKALVYEFMHNRSLKEWLYPIS 116
+G + I E L+ + H N++K+L V + N LV+EF+H + LK+++ +
Sbjct: 47 EGVPSTAIREISLLKELNHPNIVKLL----DVIHTENKL-YLVFEFLH-QDLKKFM--DA 98
Query: 117 KEDETYKRPXXXXXXXXXXIAIDVASALNYLHHDCQPVTAHCVLKPSNVLLDDDMTARVG 176
P + + LH D LKP N+L++ + ++
Sbjct: 99 SALTGIPLPLIKSYLFQLLQGLAFCHSHRVLHRD---------LKPQNLLINTEGAIKLA 149
Query: 177 DFGLAR-FLPPTRTQTSSIDVKGSIGYIAPEYGVG-NEVSTIGDVYSYGILLLELMIREK 234
DFGLAR F P RT T + ++ Y APE +G ST D++S G + E++ R
Sbjct: 150 DFGLARAFGVPVRTYTHEV---VTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRA 206
Query: 235 PSDIMFEGDMNLHKFAKM 252
+F GD + + ++
Sbjct: 207 ----LFPGDSEIDQLFRI 220
>pdb|4ASZ|A Chain A, Crystal Structure Of Apo Trkb Kinase Domain
pdb|4AT3|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Cpd5n
pdb|4AT4|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Ex429
pdb|4AT5|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Gw2580
Length = 299
Score = 50.4 bits (119), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 43/179 (24%), Positives = 78/179 (43%), Gaps = 11/179 (6%)
Query: 59 AFKSFIAECKALRNIRHRNLIKVLTACLGVDYQGNDFKALVYEFMHNRSLKEWLY---PI 115
A K F E + L N++H +++K C+ D +V+E+M + L ++L P
Sbjct: 58 ARKDFHREAELLTNLQHEHIVKFYGVCVE-----GDPLIMVFEYMKHGDLNKFLRAHGPD 112
Query: 116 SKEDETYKRPXXXXXXXXXXIAIDVASALNYLHHDCQPVTAHCVLKPSNVLLDDDMTARV 175
+ P IA +A+ + YL H L N L+ +++ ++
Sbjct: 113 AVLMAEGNPPTELTQSQMLHIAQQIAAGMVYL---ASQHFVHRDLATRNCLVGENLLVKI 169
Query: 176 GDFGLARFLPPTRTQTSSIDVKGSIGYIAPEYGVGNEVSTIGDVYSYGILLLELMIREK 234
GDFG++R + T I ++ PE + + +T DV+S G++L E+ K
Sbjct: 170 GDFGMSRDVYSTDYYRVGGHTMLPIRWMPPESIMYRKFTTESDVWSLGVVLWEIFTYGK 228
>pdb|3PXF|A Chain A, Cdk2 In Complex With Two Molecules Of
8-Anilino-1-Naphthalene Sulfonate
pdb|3PXQ|A Chain A, Cdk2 In Complex With 3 Molecules Of
8-Anilino-1-Naphthalene Sulfonate
pdb|3PXR|A Chain A, Apo Cdk2 Crystallized From Jeffamine
pdb|3PXY|A Chain A, Cdk2 In Complex With Inhibitor Jws648
pdb|3PXZ|A Chain A, Cdk2 Ternary Complex With Jws648 And Ans
pdb|3PY0|A Chain A, Cdk2 In Complex With Inhibitor Su9516
pdb|3PY1|A Chain A, Cdk2 Ternary Complex With Su9516 And Ans
pdb|3QL8|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-260
pdb|3QQF|A Chain A, Cdk2 In Complex With Inhibitor L1
pdb|3QQG|A Chain A, Cdk2 In Complex With Inhibitor L2-5
pdb|3QQH|A Chain A, Cdk2 In Complex With Inhibitor L2-2
pdb|3QQJ|A Chain A, Cdk2 In Complex With Inhibitor L2
pdb|3QQL|A Chain A, Cdk2 In Complex With Inhibitor L3
pdb|3QRT|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc2-55
pdb|3QRU|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc1-12
pdb|3QWJ|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-142
pdb|3QWK|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-150
pdb|3QX2|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-190
pdb|3QX4|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-78
pdb|3QXO|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-84
pdb|3QZF|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-52
pdb|3QZG|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-76
pdb|3QZH|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-124
pdb|3QZI|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-126
pdb|3R1Q|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-102
pdb|3R1S|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-127
pdb|3R1Y|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-134
pdb|3R28|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-140
pdb|3R6X|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-158
pdb|3R71|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-162
pdb|3R73|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-164
pdb|3R7E|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-67
pdb|3R7I|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-74
pdb|3R7U|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-75
pdb|3R7V|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-9
pdb|3R7Y|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-88
pdb|3R83|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-92
pdb|3R8L|A Chain A, Cdk2 In Complex With Inhibitor L3-4
pdb|3R8M|A Chain A, Cdk2 In Complex With Inhibitor L3-3
pdb|3R8P|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc1-6
pdb|3RAI|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-160
pdb|3RM6|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-80
pdb|3RM7|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-91
pdb|3ROY|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-154
pdb|3RPO|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-156
pdb|4EZ3|A Chain A, Cdk2 In Complex With Nsc 134199
pdb|4EZ7|A Chain A, Cdk2 In Complex With Staurosporine And 2 Molecules Of
8-Anilino-1- Naphthalene Sulfonic Acid
pdb|3QQK|A Chain A, Cdk2 In Complex With Inhibitor L4
pdb|3QTQ|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-137
pdb|3QTR|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-148
pdb|3QTS|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-12
pdb|3QTU|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-132
pdb|3QTW|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-13
pdb|3QTX|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-35
pdb|3QTZ|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-36
pdb|3QU0|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-38
pdb|3QXP|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-89
pdb|3R8U|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-132
pdb|3R8V|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-135
pdb|3R8Z|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-136
pdb|3R9D|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-135
pdb|3R9H|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-142
pdb|3R9N|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-21
pdb|3R9O|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-143
pdb|3RAH|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-22
pdb|3RAK|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-32
pdb|3RAL|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-34
pdb|3RJC|A Chain A, Cdk2 In Complex With Inhibitor L4-12
pdb|3RK5|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-72
pdb|3RK7|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-71
pdb|3RK9|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-74
pdb|3RKB|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-73
pdb|3RMF|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-33
pdb|3RNI|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-86
pdb|3RPR|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-49
pdb|3RPV|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-88
pdb|3RPY|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-40
pdb|3RZB|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-23
pdb|3S00|A Chain A, Cdk2 In Complex With Inhibitor L4-14
pdb|3S0O|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-138
pdb|3S1H|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-39
pdb|3SQQ|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-96
pdb|4GCJ|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-89
Length = 306
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 52/198 (26%), Positives = 89/198 (44%), Gaps = 26/198 (13%)
Query: 57 QGAFKSFIAECKALRNIRHRNLIKVLTACLGVDYQGNDFKALVYEFMHNRSLKEWLYPIS 116
+G + I E L+ + H N++K+L V + N LV+EF+H + LK+++ +
Sbjct: 50 EGVPSTAIREISLLKELNHPNIVKLL----DVIHTENKL-YLVFEFLH-QDLKKFM--DA 101
Query: 117 KEDETYKRPXXXXXXXXXXIAIDVASALNYLHHDCQPVTAHCVLKPSNVLLDDDMTARVG 176
P + + LH D LKP N+L++ + ++
Sbjct: 102 SALTGIPLPLIKSYLFQLLQGLAFCHSHRVLHRD---------LKPQNLLINTEGAIKLA 152
Query: 177 DFGLAR-FLPPTRTQTSSIDVKGSIGYIAPEYGVG-NEVSTIGDVYSYGILLLELMIREK 234
DFGLAR F P RT T + ++ Y APE +G ST D++S G + E++ R
Sbjct: 153 DFGLARAFGVPVRTYTHEV---VTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRA 209
Query: 235 PSDIMFEGDMNLHKFAKM 252
+F GD + + ++
Sbjct: 210 ----LFPGDSEIDQLFRI 223
>pdb|4E1Z|A Chain A, Structure Of Mouse Tyk-2 Complexed To A 3-Aminoindazole
Inhibitor
Length = 291
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 45/167 (26%), Positives = 71/167 (42%), Gaps = 20/167 (11%)
Query: 66 ECKALRNIRHRNLIKVLTACLGVDYQGNDFKALVYEFMHNRSLKEWLYPISKEDETYKRP 125
E + LR + H +++K C + QG LV E++ SL+++L P
Sbjct: 61 EIEILRTLYHEHIVKYKGCC---EDQGEKSVQLVMEYVPLGSLRDYL------------P 105
Query: 126 XXXXXXXXXXI-AIDVASALNYLHHDCQPVTAHCVLKPSNVLLDDDMTARVGDFGLARFL 184
+ A + + YLH H L NVLLD+D ++GDFGLA+ +
Sbjct: 106 RHCVGLAQLLLFAQQICEGMAYLHAQ---HYIHRALAARNVLLDNDRLVKIGDFGLAKAV 162
Query: 185 PPTRTQTS-SIDVKGSIGYIAPEYGVGNEVSTIGDVYSYGILLLELM 230
P D + + APE + DV+S+G+ L EL+
Sbjct: 163 PEGHEYYRVREDGDSPVFWYAPECLKECKFYYASDVWSFGVTLYELL 209
>pdb|4E20|A Chain A, Structure Of Mouse Tyk-2 Complexed To A 3-Aminoindazole
Inhibitor
Length = 290
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 45/167 (26%), Positives = 71/167 (42%), Gaps = 20/167 (11%)
Query: 66 ECKALRNIRHRNLIKVLTACLGVDYQGNDFKALVYEFMHNRSLKEWLYPISKEDETYKRP 125
E + LR + H +++K C + QG LV E++ SL+++L P
Sbjct: 60 EIEILRTLYHEHIVKYKGCC---EDQGEKSVQLVMEYVPLGSLRDYL------------P 104
Query: 126 XXXXXXXXXXI-AIDVASALNYLHHDCQPVTAHCVLKPSNVLLDDDMTARVGDFGLARFL 184
+ A + + YLH H L NVLLD+D ++GDFGLA+ +
Sbjct: 105 RHCVGLAQLLLFAQQICEGMAYLHAQ---HYIHRALAARNVLLDNDRLVKIGDFGLAKAV 161
Query: 185 PPTRTQTS-SIDVKGSIGYIAPEYGVGNEVSTIGDVYSYGILLLELM 230
P D + + APE + DV+S+G+ L EL+
Sbjct: 162 PEGHEYYRVREDGDSPVFWYAPECLKECKFYYASDVWSFGVTLYELL 208
>pdb|2W9F|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 49/192 (25%), Positives = 83/192 (43%), Gaps = 25/192 (13%)
Query: 64 IAECKALRNIRHRNLIKVLTACLGVDYQGNDFKALVYEFMHNRSLKEWL---YPISKEDE 120
+A + L H N+++++ C LV+E + ++ L+ +L P E
Sbjct: 54 VALLRRLEAFEHPNVVRLMDVCATSRTDREIKVTLVFEHV-DQDLRTYLDKAPPPGLPAE 112
Query: 121 TYKRPXXXXXXXXXXIAIDVASALNYLHHDCQPVTAHCVLKPSNVLLDDDMTARVGDFGL 180
T K + L++LH +C H LKP N+L+ T ++ DFGL
Sbjct: 113 TIK-----------DLMRQFLRGLDFLHANC---IVHRDLKPENILVTSGGTVKLADFGL 158
Query: 181 ARFLPPTRTQTSSIDVKGSIGYIAPEYGVGNEVSTIGDVYSYGILLLELMIREKPSDIMF 240
AR Q + V ++ Y APE + + +T D++S G + E M R KP +F
Sbjct: 159 ARIY---SYQMALFPVVVTLWYRAPEVLLQSTYATPVDMWSVGCIFAE-MFRRKP---LF 211
Query: 241 EGDMNLHKFAKM 252
G+ + K+
Sbjct: 212 CGNSEADQLGKI 223
>pdb|3G33|A Chain A, Crystal Structure Of Cdk4CYCLIN D3
pdb|3G33|C Chain C, Crystal Structure Of Cdk4CYCLIN D3
Length = 308
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 49/192 (25%), Positives = 83/192 (43%), Gaps = 25/192 (13%)
Query: 64 IAECKALRNIRHRNLIKVLTACLGVDYQGNDFKALVYEFMHNRSLKEWL---YPISKEDE 120
+A + L H N+++++ C LV+E + ++ L+ +L P E
Sbjct: 62 VALLRRLEAFEHPNVVRLMDVCATSRTDREIKVTLVFEHV-DQDLRTYLDKAPPPGLPAE 120
Query: 121 TYKRPXXXXXXXXXXIAIDVASALNYLHHDCQPVTAHCVLKPSNVLLDDDMTARVGDFGL 180
T K + L++LH +C H LKP N+L+ T ++ DFGL
Sbjct: 121 TIK-----------DLMRQFLRGLDFLHANC---IVHRDLKPENILVTSGGTVKLADFGL 166
Query: 181 ARFLPPTRTQTSSIDVKGSIGYIAPEYGVGNEVSTIGDVYSYGILLLELMIREKPSDIMF 240
AR Q + V ++ Y APE + + +T D++S G + E M R KP +F
Sbjct: 167 ARIY---SYQMALTPVVVTLWYRAPEVLLQSTYATPVDMWSVGCIFAE-MFRRKP---LF 219
Query: 241 EGDMNLHKFAKM 252
G+ + K+
Sbjct: 220 CGNSEADQLGKI 231
>pdb|3G2F|A Chain A, Crystal Structure Of The Kinase Domain Of Bone
Morphogenetic Protein Receptor Type Ii (Bmpr2) At 2.35 A
Resolution
pdb|3G2F|B Chain B, Crystal Structure Of The Kinase Domain Of Bone
Morphogenetic Protein Receptor Type Ii (Bmpr2) At 2.35 A
Resolution
Length = 336
Score = 49.7 bits (117), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 61/239 (25%), Positives = 104/239 (43%), Gaps = 44/239 (18%)
Query: 21 IEVGKLKNLEILD------VSRNMLEENLISAGTFGFSHLRRQGAFKSFIAECKALRN-- 72
+++ LK LE++ V + L+E ++ F F++ RQ +FI E R
Sbjct: 10 LDLDNLKLLELIGRGRYGAVYKGSLDERPVAVKVFSFAN--RQ----NFINEKNIYRVPL 63
Query: 73 IRHRNLIKVLTACLGVDYQGNDFKALVYEFMHNRSLKEWLYPISKEDETYKRPXXXXXXX 132
+ H N+ + + V G LV E+ N SL ++L + + + R
Sbjct: 64 MEHDNIARFIVGDERVTADGRMEYLLVMEYYPNGSLXKYLSLHTSDWVSSCR-------- 115
Query: 133 XXXIAIDVASALNYLHHDC------QPVTAHCVLKPSNVLLDDDMTARVGDFGLA----- 181
+A V L YLH + +P +H L NVL+ +D T + DFGL+
Sbjct: 116 ---LAHSVTRGLAYLHTELPRGDHYKPAISHRDLNSRNVLVKNDGTCVISDFGLSMRLTG 172
Query: 182 -RFLPPTRTQTSSIDVKGSIGYIAPEYGVG-----NEVSTIG--DVYSYGILLLELMIR 232
R + P ++I G+I Y+APE G + S + D+Y+ G++ E+ +R
Sbjct: 173 NRLVRPGEEDNAAISEVGTIRYMAPEVLEGAVNLRDXESALKQVDMYALGLIYWEIFMR 231
>pdb|3NYX|A Chain A, Non-Phosphorylated Tyk2 Jh1 Domain With
Quinoline-Thiadiazole- Thiophene Inhibitor
Length = 302
Score = 49.7 bits (117), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 46/166 (27%), Positives = 69/166 (41%), Gaps = 18/166 (10%)
Query: 66 ECKALRNIRHRNLIKVLTACLGVDYQGNDFKALVYEFMHNRSLKEWLYPISKEDETYKRP 125
E LR + H ++IK C + QG LV E++ SL+++L S
Sbjct: 66 EIDILRTLYHEHIIKYKGCC---EDQGEKSLQLVMEYVPLGSLRDYLPRHS--------- 113
Query: 126 XXXXXXXXXXIAIDVASALNYLHHDCQPVTAHCVLKPSNVLLDDDMTARVGDFGLARFLP 185
A + + YLH H L NVLLD+D ++GDFGLA+ +P
Sbjct: 114 --IGLAQLLLFAQQICEGMAYLHSQ---HYIHRNLAARNVLLDNDRLVKIGDFGLAKAVP 168
Query: 186 PTRTQTS-SIDVKGSIGYIAPEYGVGNEVSTIGDVYSYGILLLELM 230
D + + APE + DV+S+G+ L EL+
Sbjct: 169 EGHEYYRVREDGDSPVFWYAPECLKEYKFYYASDVWSFGVTLYELL 214
>pdb|2W99|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
pdb|2W9Z|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 49.7 bits (117), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 49/192 (25%), Positives = 83/192 (43%), Gaps = 25/192 (13%)
Query: 64 IAECKALRNIRHRNLIKVLTACLGVDYQGNDFKALVYEFMHNRSLKEWL---YPISKEDE 120
+A + L H N+++++ C LV+E + ++ L+ +L P E
Sbjct: 54 VALLRRLEAFEHPNVVRLMDVCATSRTDREIKVTLVFEHV-DQDLRTYLDKAPPPGLPAE 112
Query: 121 TYKRPXXXXXXXXXXIAIDVASALNYLHHDCQPVTAHCVLKPSNVLLDDDMTARVGDFGL 180
T K + L++LH +C H LKP N+L+ T ++ DFGL
Sbjct: 113 TIK-----------DLMRQFLRGLDFLHANC---IVHRDLKPENILVTSGGTVKLADFGL 158
Query: 181 ARFLPPTRTQTSSIDVKGSIGYIAPEYGVGNEVSTIGDVYSYGILLLELMIREKPSDIMF 240
AR Q + V ++ Y APE + + +T D++S G + E M R KP +F
Sbjct: 159 ARIY---SYQMALAPVVVTLWYRAPEVLLQSTYATPVDMWSVGCIFAE-MFRRKP---LF 211
Query: 241 EGDMNLHKFAKM 252
G+ + K+
Sbjct: 212 CGNSEADQLGKI 223
>pdb|3DB6|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 902
pdb|3D5X|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Wortmannin.
pdb|3DBE|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 557
pdb|3DBF|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 562
Length = 301
Score = 49.3 bits (116), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 42/149 (28%), Positives = 64/149 (42%), Gaps = 21/149 (14%)
Query: 90 YQGNDFKALVYEFMHNRSLKEWLYPISKEDETYKRPXXXXXXXXXXIAIDVASALNYLHH 149
++ +DF +V E RSL E +KR + YLH+
Sbjct: 95 FEDDDFVYVVLEICRRRSLLEL----------HKRRKAVTEPEARYFMRQTIQGVQYLHN 144
Query: 150 DCQPVTAHCVLKPSNVLLDDDMTARVGDFGLARFLPPTRTQ---TSSIDVKGSIGYIAPE 206
+ H LK N+ L+DDM ++GDFGLA T+ + D+ G+ YIAPE
Sbjct: 145 N---RVIHRDLKLGNLFLNDDMDVKIGDFGLA-----TKIEFDGERKKDLCGTPNYIAPE 196
Query: 207 YGVGNEVSTIGDVYSYGILLLELMIREKP 235
S D++S G +L L++ + P
Sbjct: 197 VLCKKGHSFEVDIWSLGCILYTLLVGKPP 225
>pdb|3NZ0|A Chain A, Non-Phosphorylated Tyk2 Kinase With Cmp6
Length = 302
Score = 49.3 bits (116), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 46/166 (27%), Positives = 69/166 (41%), Gaps = 18/166 (10%)
Query: 66 ECKALRNIRHRNLIKVLTACLGVDYQGNDFKALVYEFMHNRSLKEWLYPISKEDETYKRP 125
E LR + H ++IK C + QG LV E++ SL+++L S
Sbjct: 66 EIDILRTLYHEHIIKYKGCC---EDQGEKSLQLVMEYVPLGSLRDYLPRHS--------- 113
Query: 126 XXXXXXXXXXIAIDVASALNYLHHDCQPVTAHCVLKPSNVLLDDDMTARVGDFGLARFLP 185
A + + YLH H L NVLLD+D ++GDFGLA+ +P
Sbjct: 114 --IGLAQLLLFAQQICEGMAYLHAQ---HYIHRNLAARNVLLDNDRLVKIGDFGLAKAVP 168
Query: 186 PTRTQTS-SIDVKGSIGYIAPEYGVGNEVSTIGDVYSYGILLLELM 230
D + + APE + DV+S+G+ L EL+
Sbjct: 169 EGHEYYRVREDGDSPVFWYAPECLKEYKFYYASDVWSFGVTLYELL 214
>pdb|2QOO|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:y742f Triple Mutant
Length = 373
Score = 49.3 bits (116), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 47/186 (25%), Positives = 80/186 (43%), Gaps = 30/186 (16%)
Query: 50 GFSHLRRQGAFKSFIAECKALRNIRHRNLIK---VLTACLGVDYQGNDFKALVYEFMHNR 106
G++ +R + F+ E + H N+I+ V+T V +V E+M N
Sbjct: 84 GYTEKQR----RDFLGEASIMGQFDHPNIIRLEGVVTKSKPV--------MIVTEYMENG 131
Query: 107 SLKEWLYPISKEDETYKRPXXXXXXXXXXIAIDVASALNYLHHDCQPVTAHCVLKPSNVL 166
SL +L K D + + S + ++H D L N+L
Sbjct: 132 SLDSFL---RKHDAQFTVIQLVGMLRGIASGMKYLSDMGFVHRD---------LAARNIL 179
Query: 167 LDDDMTARVGDFGLARFLP--PTRTQTSSIDVKGSIGYIAPEYGVGNEVSTIGDVYSYGI 224
++ ++ +V DFGL+R L P T+ K I + +PE + ++ DV+SYGI
Sbjct: 180 INSNLVCKVSDFGLSRVLEDDPEAAYTTR-GGKIPIRWTSPEAIAYRKFTSASDVWSYGI 238
Query: 225 LLLELM 230
+L E+M
Sbjct: 239 VLWEVM 244
>pdb|3V5Q|A Chain A, Discovery Of A Selective Trk Inhibitor With Efficacy In
Rodent Cancer Tumor Models
pdb|3V5Q|B Chain B, Discovery Of A Selective Trk Inhibitor With Efficacy In
Rodent Cancer Tumor Models
Length = 297
Score = 49.3 bits (116), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 43/183 (23%), Positives = 78/183 (42%), Gaps = 14/183 (7%)
Query: 58 GAFKSFIAECKALRNIRHRNLIKVLTACLGVDYQGNDFKALVYEFMHNRSLKEWLYP--- 114
A K F E + L N++H +++K C D +V+E+M + L ++L
Sbjct: 59 AARKDFQREAELLTNLQHEHIVKFYGVC-----GDGDPLIMVFEYMKHGDLNKFLRAHGP 113
Query: 115 ---ISKEDETYKRPXXXXXXXXXXIAIDVASALNYLHHDCQPVTAHCVLKPSNVLLDDDM 171
I + + + IA +AS + YL H L N L+ ++
Sbjct: 114 DAMILVDGQPRQAKGELGLSQMLHIASQIASGMVYL---ASQHFVHRDLATRNCLVGANL 170
Query: 172 TARVGDFGLARFLPPTRTQTSSIDVKGSIGYIAPEYGVGNEVSTIGDVYSYGILLLELMI 231
++GDFG++R + T I ++ PE + + +T DV+S+G++L E+
Sbjct: 171 LVKIGDFGMSRDVYSTDYYRVGGHTMLPIRWMPPESIMYRKFTTESDVWSFGVILWEIFT 230
Query: 232 REK 234
K
Sbjct: 231 YGK 233
>pdb|3D5V|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain.
pdb|3DB8|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 041
pdb|3DBC|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 257
pdb|3DBD|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 094
Length = 317
Score = 49.3 bits (116), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 42/149 (28%), Positives = 64/149 (42%), Gaps = 21/149 (14%)
Query: 90 YQGNDFKALVYEFMHNRSLKEWLYPISKEDETYKRPXXXXXXXXXXIAIDVASALNYLHH 149
++ +DF +V E RSL E +KR + YLH+
Sbjct: 111 FEDDDFVYVVLEICRRRSLLEL----------HKRRKAVTEPEARYFMRQTIQGVQYLHN 160
Query: 150 DCQPVTAHCVLKPSNVLLDDDMTARVGDFGLARFLPPTRTQ---TSSIDVKGSIGYIAPE 206
+ H LK N+ L+DDM ++GDFGLA T+ + D+ G+ YIAPE
Sbjct: 161 N---RVIHRDLKLGNLFLNDDMDVKIGDFGLA-----TKIEFDGERKKDLCGTPNYIAPE 212
Query: 207 YGVGNEVSTIGDVYSYGILLLELMIREKP 235
S D++S G +L L++ + P
Sbjct: 213 VLCKKGHSFEVDIWSLGCILYTLLVGKPP 241
>pdb|2QOB|A Chain A, Human Epha3 Kinase Domain, Base Structure
Length = 344
Score = 49.3 bits (116), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 48/186 (25%), Positives = 79/186 (42%), Gaps = 30/186 (16%)
Query: 50 GFSHLRRQGAFKSFIAECKALRNIRHRNLIK---VLTACLGVDYQGNDFKALVYEFMHNR 106
G++ +R + F+ E + H N+I+ V+T V +V E M N
Sbjct: 55 GYTEKQR----RDFLGEASIMGQFDHPNIIRLEGVVTKSKPV--------MIVTEXMENG 102
Query: 107 SLKEWLYPISKEDETYKRPXXXXXXXXXXIAIDVASALNYLHHDCQPVTAHCVLKPSNVL 166
SL +L K D + + S + Y+H D L N+L
Sbjct: 103 SLDSFL---RKHDAQFTVIQLVGMLRGIASGMKYLSDMGYVHRD---------LAARNIL 150
Query: 167 LDDDMTARVGDFGLARFLP--PTRTQTSSIDVKGSIGYIAPEYGVGNEVSTIGDVYSYGI 224
++ ++ +V DFGL+R L P T+ K I + +PE + ++ DV+SYGI
Sbjct: 151 INSNLVCKVSDFGLSRVLEDDPEAAYTTR-GGKIPIRWTSPEAIAYRKFTSASDVWSYGI 209
Query: 225 LLLELM 230
+L E+M
Sbjct: 210 VLWEVM 215
>pdb|2QKR|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510
With Indirubin 3'-Monoxime Bound
Length = 313
Score = 48.9 bits (115), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 55/193 (28%), Positives = 88/193 (45%), Gaps = 37/193 (19%)
Query: 57 QGAFKSFIAECKALRNIRHRNLIKVLTA-----CLGVDYQGNDFKALVYEFMHNRSLKEW 111
+G + I E L+ + H N++ ++ CL LV+EFM + LK+
Sbjct: 60 EGIPSTAIREISLLKELHHPNIVSLIDVIHSERCL----------TLVFEFM-EKDLKK- 107
Query: 112 LYPISKEDETYKRPXXXXXXXXXXIAIDVASALNYLHHDCQPVTAHCVLKPSNVLLDDDM 171
+ E++T I I + L + H Q H LKP N+L++ D
Sbjct: 108 ---VLDENKT--------GLQDSQIKIYLYQLLRGVAHCHQHRILHRDLKPQNLLINSDG 156
Query: 172 TARVGDFGLAR-FLPPTRTQTSSIDVKGSIGYIAPEYGVGN-EVSTIGDVYSYGILLLEL 229
++ DFGLAR F P R+ T + ++ Y AP+ +G+ + ST D++S G + E
Sbjct: 157 ALKLADFGLARAFGIPVRSYTHEV---VTLWYRAPDVLMGSKKYSTSVDIWSIGCIFAE- 212
Query: 230 MIREKPSDIMFEG 242
MI KP +F G
Sbjct: 213 MITGKP---LFPG 222
>pdb|3NIZ|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510
With Adp Bound
Length = 311
Score = 48.9 bits (115), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 55/193 (28%), Positives = 88/193 (45%), Gaps = 37/193 (19%)
Query: 57 QGAFKSFIAECKALRNIRHRNLIKVLTA-----CLGVDYQGNDFKALVYEFMHNRSLKEW 111
+G + I E L+ + H N++ ++ CL LV+EFM + LK+
Sbjct: 60 EGIPSTAIREISLLKELHHPNIVSLIDVIHSERCL----------TLVFEFM-EKDLKK- 107
Query: 112 LYPISKEDETYKRPXXXXXXXXXXIAIDVASALNYLHHDCQPVTAHCVLKPSNVLLDDDM 171
+ E++T I I + L + H Q H LKP N+L++ D
Sbjct: 108 ---VLDENKT--------GLQDSQIKIYLYQLLRGVAHCHQHRILHRDLKPQNLLINSDG 156
Query: 172 TARVGDFGLAR-FLPPTRTQTSSIDVKGSIGYIAPEYGVGN-EVSTIGDVYSYGILLLEL 229
++ DFGLAR F P R+ T + ++ Y AP+ +G+ + ST D++S G + E
Sbjct: 157 ALKLADFGLARAFGIPVRSYTHEV---VTLWYRAPDVLMGSKKYSTSVDIWSIGCIFAE- 212
Query: 230 MIREKPSDIMFEG 242
MI KP +F G
Sbjct: 213 MITGKP---LFPG 222
>pdb|4EOI|A Chain A, Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
pdb|4EOI|C Chain C, Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
Length = 299
Score = 48.9 bits (115), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 51/198 (25%), Positives = 88/198 (44%), Gaps = 26/198 (13%)
Query: 57 QGAFKSFIAECKALRNIRHRNLIKVLTACLGVDYQGNDFKALVYEFMHNRSLKEWLYPIS 116
+G + I E L+ + H N++K+L V + N LV+EF+H + LK+++ +
Sbjct: 43 EGVPSTAIREISLLKELNHPNIVKLL----DVIHTENKL-YLVFEFLH-QDLKDFM--DA 94
Query: 117 KEDETYKRPXXXXXXXXXXIAIDVASALNYLHHDCQPVTAHCVLKPSNVLLDDDMTARVG 176
P + + LH D LKP N+L++ + ++
Sbjct: 95 SALTGIPLPLIKSYLFQLLQGLAFCHSHRVLHRD---------LKPENLLINTEGAIKLA 145
Query: 177 DFGLAR-FLPPTRTQTSSIDVKGSIGYIAPEYGVG-NEVSTIGDVYSYGILLLELMIREK 234
DFGLAR F P RT + ++ Y APE +G ST D++S G + E++ R
Sbjct: 146 DFGLARAFGVPVRTYXHEV---VTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRA 202
Query: 235 PSDIMFEGDMNLHKFAKM 252
+F GD + + ++
Sbjct: 203 ----LFPGDSEIDQLFRI 216
>pdb|2QO7|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Dephosphorylated, Amp-Pnp Bound
pdb|2QOQ|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Base, Amp-Pnp
Bound Structure
Length = 373
Score = 48.9 bits (115), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 48/186 (25%), Positives = 79/186 (42%), Gaps = 30/186 (16%)
Query: 50 GFSHLRRQGAFKSFIAECKALRNIRHRNLIK---VLTACLGVDYQGNDFKALVYEFMHNR 106
G++ +R + F+ E + H N+I+ V+T V +V E M N
Sbjct: 84 GYTEKQR----RDFLGEASIMGQFDHPNIIRLEGVVTKSKPV--------MIVTEXMENG 131
Query: 107 SLKEWLYPISKEDETYKRPXXXXXXXXXXIAIDVASALNYLHHDCQPVTAHCVLKPSNVL 166
SL +L K D + + S + Y+H D L N+L
Sbjct: 132 SLDSFL---RKHDAQFTVIQLVGMLRGIASGMKYLSDMGYVHRD---------LAARNIL 179
Query: 167 LDDDMTARVGDFGLARFLP--PTRTQTSSIDVKGSIGYIAPEYGVGNEVSTIGDVYSYGI 224
++ ++ +V DFGL+R L P T+ K I + +PE + ++ DV+SYGI
Sbjct: 180 INSNLVCKVSDFGLSRVLEDDPEAAYTTR-GGKIPIRWTSPEAIAYRKFTSASDVWSYGI 238
Query: 225 LLLELM 230
+L E+M
Sbjct: 239 VLWEVM 244
>pdb|2H6D|A Chain A, Protein Kinase Domain Of The Human 5'-Amp-Activated
Protein Kinase Catalytic Subunit Alpha-2 (Ampk Alpha-2
Chain)
Length = 276
Score = 48.9 bits (115), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 50/177 (28%), Positives = 79/177 (44%), Gaps = 30/177 (16%)
Query: 66 ECKALRNIRHRNLIKVLTACLGVDYQGNDFKALVYEFMHNRSLKEWLYPISKEDETYKRP 125
E + L+ RH ++IK+ V DF +V E++ L +++ + +E R
Sbjct: 61 EIQNLKLFRHPHIIKLYQ----VISTPTDF-FMVMEYVSGGELFDYICKHGRVEEMEAR- 114
Query: 126 XXXXXXXXXXIAIDVASALNYLHHDCQPVTAHCVLKPSNVLLDDDMTARVGDFGLARFLP 185
+ + SA++Y H + + H LKP NVLLD M A++ DFGL+ +
Sbjct: 115 ---------RLFQQILSAVDYCH---RHMVVHRDLKPENVLLDAHMNAKIADFGLSNMMS 162
Query: 186 PTRTQTSSIDVKGSIGYIAPE-----YGVGNEVSTIGDVYSYGILLLELMIREKPSD 237
+S GS Y APE G EV D++S G++L L+ P D
Sbjct: 163 DGEFLRTSC---GSPNYAAPEVISGRLYAGPEV----DIWSCGVILYALLCGTLPFD 212
>pdb|2HEL|A Chain A, Crystal Structure Of A Mutant Epha4 Kinase Domain (Y742a)
Length = 306
Score = 48.9 bits (115), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 44/175 (25%), Positives = 76/175 (43%), Gaps = 26/175 (14%)
Query: 61 KSFIAECKALRNIRHRNLIK---VLTACLGVDYQGNDFKALVYEFMHNRSLKEWLYPISK 117
+ F++E + H N+I V+T C V ++ E+M N SL +L K
Sbjct: 75 RDFLSEASIMGQFDHPNIIHLEGVVTKCKPV--------MIITEYMENGSLDAFL---RK 123
Query: 118 EDETYKRPXXXXXXXXXXIAIDVASALNYLHHDCQPVTAHCVLKPSNVLLDDDMTARVGD 177
D + + S ++ +H D L N+L++ ++ +V D
Sbjct: 124 NDGRFTVIQLVGMLRGIGSGMKYLSDMSAVHRD---------LAARNILVNSNLVCKVSD 174
Query: 178 FGLARFLP--PTRTQTSSIDVKGSIGYIAPEYGVGNEVSTIGDVYSYGILLLELM 230
FG++R L P T+ K I + APE + ++ DV+SYGI++ E+M
Sbjct: 175 FGMSRVLEDDPEAAYTTR-GGKIPIRWTAPEAIAYRKFTSASDVWSYGIVMWEVM 228
>pdb|1QMZ|A Chain A, Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Complex
pdb|1QMZ|C Chain C, Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Complex
pdb|1GY3|A Chain A, Pcdk2CYCLIN A IN COMPLEX WITH MGADP, NITRATE AND PEPTIDE
SUBSTRATE
pdb|1GY3|C Chain C, Pcdk2CYCLIN A IN COMPLEX WITH MGADP, NITRATE AND PEPTIDE
SUBSTRATE
pdb|1P5E|A Chain A, The Strucure Of Phospho-Cdk2CYCLIN A IN COMPLEX WITH THE
Inhibitor 4,5,6,7-Tetrabromobenzotriazole (Tbs)
pdb|1P5E|C Chain C, The Strucure Of Phospho-Cdk2CYCLIN A IN COMPLEX WITH THE
Inhibitor 4,5,6,7-Tetrabromobenzotriazole (Tbs)
pdb|2CCH|A Chain A, The Crystal Structure Of Cdk2 Cyclin A In Complex With A
Substrate Peptide Derived From Cdc Modified With A
Gamma- Linked Atp Analogue
pdb|2CCH|C Chain C, The Crystal Structure Of Cdk2 Cyclin A In Complex With A
Substrate Peptide Derived From Cdc Modified With A
Gamma- Linked Atp Analogue
pdb|2CCI|A Chain A, Crystal Structure Of Phospho-Cdk2 Cyclin A In Complex With
A Peptide Containing Both The Substrate And Recruitment
Sites Of Cdc6
pdb|2CCI|C Chain C, Crystal Structure Of Phospho-Cdk2 Cyclin A In Complex With
A Peptide Containing Both The Substrate And Recruitment
Sites Of Cdc6
pdb|2G9X|A Chain A, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
COMPLEX WITH THE Inhibitor Nu6271
pdb|2G9X|C Chain C, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
COMPLEX WITH THE Inhibitor Nu6271
pdb|3DDP|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Cr8
pdb|3DDP|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Cr8
pdb|3DDQ|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Roscovitine
pdb|3DDQ|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Roscovitine
pdb|3DOG|A Chain A, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
Complex With The Inhibitor N-&-N1
pdb|3DOG|C Chain C, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
Complex With The Inhibitor N-&-N1
Length = 299
Score = 48.5 bits (114), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 51/198 (25%), Positives = 88/198 (44%), Gaps = 26/198 (13%)
Query: 57 QGAFKSFIAECKALRNIRHRNLIKVLTACLGVDYQGNDFKALVYEFMHNRSLKEWLYPIS 116
+G + I E L+ + H N++K+L V + N LV+EF+H + LK+++ +
Sbjct: 43 EGVPSTAIREISLLKELNHPNIVKLL----DVIHTENKL-YLVFEFLH-QDLKKFM--DA 94
Query: 117 KEDETYKRPXXXXXXXXXXIAIDVASALNYLHHDCQPVTAHCVLKPSNVLLDDDMTARVG 176
P + + LH D LKP N+L++ + ++
Sbjct: 95 SALTGIPLPLIKSYLFQLLQGLAFCHSHRVLHRD---------LKPQNLLINTEGAIKLA 145
Query: 177 DFGLAR-FLPPTRTQTSSIDVKGSIGYIAPEYGVG-NEVSTIGDVYSYGILLLELMIREK 234
DFGLAR F P RT + ++ Y APE +G ST D++S G + E++ R
Sbjct: 146 DFGLARAFGVPVRTYXHEV---VTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRA 202
Query: 235 PSDIMFEGDMNLHKFAKM 252
+F GD + + ++
Sbjct: 203 ----LFPGDSEIDQLFRI 216
>pdb|2W96|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 48.5 bits (114), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 49/192 (25%), Positives = 83/192 (43%), Gaps = 25/192 (13%)
Query: 64 IAECKALRNIRHRNLIKVLTACLGVDYQGNDFKALVYEFMHNRSLKEWL---YPISKEDE 120
+A + L H N+++++ C LV+E + ++ L+ +L P E
Sbjct: 54 VALLRRLEAFEHPNVVRLMDVCATSRTDREIKVTLVFEHV-DQDLRTYLDKAPPPGLPAE 112
Query: 121 TYKRPXXXXXXXXXXIAIDVASALNYLHHDCQPVTAHCVLKPSNVLLDDDMTARVGDFGL 180
T K + L++LH +C H LKP N+L+ T ++ DFGL
Sbjct: 113 TIK-----------DLMRQFLRGLDFLHANC---IVHRDLKPENILVTSGGTVKLADFGL 158
Query: 181 ARFLPPTRTQTSSIDVKGSIGYIAPEYGVGNEVSTIGDVYSYGILLLELMIREKPSDIMF 240
AR Q + V ++ Y APE + + +T D++S G + E M R KP +F
Sbjct: 159 ARIY---SYQMALDPVVVTLWYRAPEVLLQSTYATPVDMWSVGCIFAE-MFRRKP---LF 211
Query: 241 EGDMNLHKFAKM 252
G+ + K+
Sbjct: 212 CGNSEADQLGKI 223
>pdb|1JST|A Chain A, Phosphorylated Cyclin-Dependent Kinase-2 Bound To Cyclin A
pdb|1JST|C Chain C, Phosphorylated Cyclin-Dependent Kinase-2 Bound To Cyclin A
pdb|1JSU|A Chain A, P27(Kip1)CYCLIN ACDK2 COMPLEX
pdb|1FQ1|B Chain B, Crystal Structure Of Kinase Associated Phosphatase (Kap)
In Complex With Phospho-Cdk2
pdb|2C6T|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6T|C Chain C, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2CJM|A Chain A, Mechanism Of Cdk Inhibition By Active Site
Phosphorylation: Cdk2 Y15p T160p In Complex With Cyclin
A Structure
pdb|2CJM|C Chain C, Mechanism Of Cdk Inhibition By Active Site
Phosphorylation: Cdk2 Y15p T160p In Complex With Cyclin
A Structure
pdb|2UZB|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZB|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZD|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZD|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZE|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZE|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZL|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZL|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|4II5|A Chain A, Structure Of Pcdk2/cyclina Bound To Adp And 1 Magnesium
Ion
pdb|4II5|C Chain C, Structure Of Pcdk2/cyclina Bound To Adp And 1 Magnesium
Ion
Length = 298
Score = 48.5 bits (114), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 51/198 (25%), Positives = 88/198 (44%), Gaps = 26/198 (13%)
Query: 57 QGAFKSFIAECKALRNIRHRNLIKVLTACLGVDYQGNDFKALVYEFMHNRSLKEWLYPIS 116
+G + I E L+ + H N++K+L V + N LV+EF+H + LK+++ +
Sbjct: 42 EGVPSTAIREISLLKELNHPNIVKLL----DVIHTENKL-YLVFEFLH-QDLKKFM--DA 93
Query: 117 KEDETYKRPXXXXXXXXXXIAIDVASALNYLHHDCQPVTAHCVLKPSNVLLDDDMTARVG 176
P + + LH D LKP N+L++ + ++
Sbjct: 94 SALTGIPLPLIKSYLFQLLQGLAFCHSHRVLHRD---------LKPQNLLINTEGAIKLA 144
Query: 177 DFGLAR-FLPPTRTQTSSIDVKGSIGYIAPEYGVG-NEVSTIGDVYSYGILLLELMIREK 234
DFGLAR F P RT + ++ Y APE +G ST D++S G + E++ R
Sbjct: 145 DFGLARAFGVPVRTYXHEV---VTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRA 201
Query: 235 PSDIMFEGDMNLHKFAKM 252
+F GD + + ++
Sbjct: 202 ----LFPGDSEIDQLFRI 215
>pdb|1E9H|A Chain A, Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex With
The Inhibitor Indirubin-5-Sulphonate Bound
pdb|1E9H|C Chain C, Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex With
The Inhibitor Indirubin-5-Sulphonate Bound
pdb|1PKD|A Chain A, The Crystal Structure Of Ucn-01 In Complex With Phospho-
Cdk2CYCLIN A
pdb|1PKD|C Chain C, The Crystal Structure Of Ucn-01 In Complex With Phospho-
Cdk2CYCLIN A
Length = 297
Score = 48.5 bits (114), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 51/198 (25%), Positives = 88/198 (44%), Gaps = 26/198 (13%)
Query: 57 QGAFKSFIAECKALRNIRHRNLIKVLTACLGVDYQGNDFKALVYEFMHNRSLKEWLYPIS 116
+G + I E L+ + H N++K+L V + N LV+EF+H + LK+++ +
Sbjct: 43 EGVPSTAIREISLLKELNHPNIVKLL----DVIHTENKL-YLVFEFLH-QDLKKFM--DA 94
Query: 117 KEDETYKRPXXXXXXXXXXIAIDVASALNYLHHDCQPVTAHCVLKPSNVLLDDDMTARVG 176
P + + LH D LKP N+L++ + ++
Sbjct: 95 SALTGIPLPLIKSYLFQLLQGLAFCHSHRVLHRD---------LKPQNLLINTEGAIKLA 145
Query: 177 DFGLAR-FLPPTRTQTSSIDVKGSIGYIAPEYGVG-NEVSTIGDVYSYGILLLELMIREK 234
DFGLAR F P RT + ++ Y APE +G ST D++S G + E++ R
Sbjct: 146 DFGLARAFGVPVRTYXHEV---VTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRA 202
Query: 235 PSDIMFEGDMNLHKFAKM 252
+F GD + + ++
Sbjct: 203 ----LFPGDSEIDQLFRI 216
>pdb|3BHT|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 3
pdb|3BHT|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 3
pdb|3BHU|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 5
pdb|3BHU|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 5
pdb|3BHV|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Variolin B
pdb|3BHV|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Variolin B
pdb|3MY5|A Chain A, Cdk2CYCLINA IN COMPLEX WITH DRB
pdb|3MY5|C Chain C, Cdk2CYCLINA IN COMPLEX WITH DRB
pdb|3TNW|A Chain A, Structure Of Cdk2CYCLIN A IN COMPLEX WITH CAN508
pdb|3TNW|C Chain C, Structure Of Cdk2CYCLIN A IN COMPLEX WITH CAN508
pdb|4BCO|A Chain A, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCO|C Chain C, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 300
Score = 48.5 bits (114), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 51/198 (25%), Positives = 88/198 (44%), Gaps = 26/198 (13%)
Query: 57 QGAFKSFIAECKALRNIRHRNLIKVLTACLGVDYQGNDFKALVYEFMHNRSLKEWLYPIS 116
+G + I E L+ + H N++K+L V + N LV+EF+H + LK+++ +
Sbjct: 44 EGVPSTAIREISLLKELNHPNIVKLL----DVIHTENKL-YLVFEFLH-QDLKKFM--DA 95
Query: 117 KEDETYKRPXXXXXXXXXXIAIDVASALNYLHHDCQPVTAHCVLKPSNVLLDDDMTARVG 176
P + + LH D LKP N+L++ + ++
Sbjct: 96 SALTGIPLPLIKSYLFQLLQGLAFCHSHRVLHRD---------LKPQNLLINTEGAIKLA 146
Query: 177 DFGLAR-FLPPTRTQTSSIDVKGSIGYIAPEYGVG-NEVSTIGDVYSYGILLLELMIREK 234
DFGLAR F P RT + ++ Y APE +G ST D++S G + E++ R
Sbjct: 147 DFGLARAFGVPVRTYXHEV---VTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRA 203
Query: 235 PSDIMFEGDMNLHKFAKM 252
+F GD + + ++
Sbjct: 204 ----LFPGDSEIDQLFRI 217
>pdb|4I3Z|A Chain A, Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNESIUM
IONS
pdb|4I3Z|C Chain C, Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNESIUM
IONS
Length = 296
Score = 48.5 bits (114), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 51/198 (25%), Positives = 88/198 (44%), Gaps = 26/198 (13%)
Query: 57 QGAFKSFIAECKALRNIRHRNLIKVLTACLGVDYQGNDFKALVYEFMHNRSLKEWLYPIS 116
+G + I E L+ + H N++K+L V + N LV+EF+H + LK+++ +
Sbjct: 42 EGVPSTAIREISLLKELNHPNIVKLL----DVIHTENKL-YLVFEFLH-QDLKKFM--DA 93
Query: 117 KEDETYKRPXXXXXXXXXXIAIDVASALNYLHHDCQPVTAHCVLKPSNVLLDDDMTARVG 176
P + + LH D LKP N+L++ + ++
Sbjct: 94 SALTGIPLPLIKSYLFQLLQGLAFCHSHRVLHRD---------LKPQNLLINTEGAIKLA 144
Query: 177 DFGLAR-FLPPTRTQTSSIDVKGSIGYIAPEYGVG-NEVSTIGDVYSYGILLLELMIREK 234
DFGLAR F P RT + ++ Y APE +G ST D++S G + E++ R
Sbjct: 145 DFGLARAFGVPVRTYXHEV---VTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRA 201
Query: 235 PSDIMFEGDMNLHKFAKM 252
+F GD + + ++
Sbjct: 202 ----LFPGDSEIDQLFRI 215
>pdb|1W98|A Chain A, The Structural Basis Of Cdk2 Activation By Cyclin E
pdb|4EOR|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Nu6102
pdb|4EOR|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Nu6102
Length = 298
Score = 48.5 bits (114), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 51/198 (25%), Positives = 88/198 (44%), Gaps = 26/198 (13%)
Query: 57 QGAFKSFIAECKALRNIRHRNLIKVLTACLGVDYQGNDFKALVYEFMHNRSLKEWLYPIS 116
+G + I E L+ + H N++K+L V + N LV+EF+H + LK+++ +
Sbjct: 43 EGVPSTAIREISLLKELNHPNIVKLL----DVIHTENKL-YLVFEFLH-QDLKKFM--DA 94
Query: 117 KEDETYKRPXXXXXXXXXXIAIDVASALNYLHHDCQPVTAHCVLKPSNVLLDDDMTARVG 176
P + + LH D LKP N+L++ + ++
Sbjct: 95 SALTGIPLPLIKSYLFQLLQGLAFCHSHRVLHRD---------LKPQNLLINTEGAIKLA 145
Query: 177 DFGLAR-FLPPTRTQTSSIDVKGSIGYIAPEYGVG-NEVSTIGDVYSYGILLLELMIREK 234
DFGLAR F P RT + ++ Y APE +G ST D++S G + E++ R
Sbjct: 146 DFGLARAFGVPVRTYXHEV---VTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRA 202
Query: 235 PSDIMFEGDMNLHKFAKM 252
+F GD + + ++
Sbjct: 203 ----LFPGDSEIDQLFRI 216
>pdb|4EOO|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With Atp
pdb|4EOO|C Chain C, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With Atp
Length = 299
Score = 48.5 bits (114), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 51/198 (25%), Positives = 88/198 (44%), Gaps = 26/198 (13%)
Query: 57 QGAFKSFIAECKALRNIRHRNLIKVLTACLGVDYQGNDFKALVYEFMHNRSLKEWLYPIS 116
+G + I E L+ + H N++K+L V + N LV+EF+H + LK+++ +
Sbjct: 44 EGVPSTAIREISLLKELNHPNIVKLL----DVIHTENKL-YLVFEFLH-QDLKKFM--DA 95
Query: 117 KEDETYKRPXXXXXXXXXXIAIDVASALNYLHHDCQPVTAHCVLKPSNVLLDDDMTARVG 176
P + + LH D LKP N+L++ + ++
Sbjct: 96 SALTGIPLPLIKSYLFQLLQGLAFCHSHRVLHRD---------LKPENLLINTEGAIKLA 146
Query: 177 DFGLAR-FLPPTRTQTSSIDVKGSIGYIAPEYGVG-NEVSTIGDVYSYGILLLELMIREK 234
DFGLAR F P RT + ++ Y APE +G ST D++S G + E++ R
Sbjct: 147 DFGLARAFGVPVRTYXHEV---VTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRA 203
Query: 235 PSDIMFEGDMNLHKFAKM 252
+F GD + + ++
Sbjct: 204 ----LFPGDSEIDQLFRI 217
>pdb|1OGU|A Chain A, Structure Of Human Thr160-phospho Cdk2/cyclin A Complexed
With A
2-arylamino-4-cyclohexylmethyl-5-nitroso-6-
aminopyrimidine Inhibitor
pdb|1OGU|C Chain C, Structure Of Human Thr160-phospho Cdk2/cyclin A Complexed
With A
2-arylamino-4-cyclohexylmethyl-5-nitroso-6-
aminopyrimidine Inhibitor
pdb|1OI9|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OI9|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIU|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIU|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIY|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIY|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
Length = 302
Score = 48.5 bits (114), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 51/198 (25%), Positives = 88/198 (44%), Gaps = 26/198 (13%)
Query: 57 QGAFKSFIAECKALRNIRHRNLIKVLTACLGVDYQGNDFKALVYEFMHNRSLKEWLYPIS 116
+G + I E L+ + H N++K+L V + N LV+EF+H + LK+++ +
Sbjct: 46 EGVPSTAIREISLLKELNHPNIVKLLD----VIHTENKL-YLVFEFLH-QDLKKFM--DA 97
Query: 117 KEDETYKRPXXXXXXXXXXIAIDVASALNYLHHDCQPVTAHCVLKPSNVLLDDDMTARVG 176
P + + LH D LKP N+L++ + ++
Sbjct: 98 SALTGIPLPLIKSYLFQLLQGLAFCHSHRVLHRD---------LKPQNLLINTEGAIKLA 148
Query: 177 DFGLAR-FLPPTRTQTSSIDVKGSIGYIAPEYGVG-NEVSTIGDVYSYGILLLELMIREK 234
DFGLAR F P RT + ++ Y APE +G ST D++S G + E++ R
Sbjct: 149 DFGLARAFGVPVRTYXHEV---VTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRA 205
Query: 235 PSDIMFEGDMNLHKFAKM 252
+F GD + + ++
Sbjct: 206 ----LFPGDSEIDQLFRI 219
>pdb|1H1P|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu2058
pdb|1H1P|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu2058
pdb|1H1Q|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6094
pdb|1H1Q|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6094
pdb|1H1R|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6086
pdb|1H1R|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6086
pdb|1H1S|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6102
pdb|1H1S|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6102
pdb|1H24|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH A 9 RESIDUE RECRUITMENT
Peptide From E2f
pdb|1H24|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH A 9 RESIDUE RECRUITMENT
Peptide From E2f
pdb|1H25|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From Retinoblastoma-Associated Protein
pdb|1H25|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From Retinoblastoma-Associated Protein
pdb|1H26|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P53
pdb|1H26|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P53
pdb|1H27|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P27
pdb|1H27|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P27
pdb|1H28|A Chain A, Cdk2/cyclin A In Complex With An 11-residue Recruitment
Peptide From P107
pdb|1H28|C Chain C, Cdk2/cyclin A In Complex With An 11-residue Recruitment
Peptide From P107
pdb|2WMA|A Chain A, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMA|C Chain C, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMB|A Chain A, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMB|C Chain C, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
Length = 303
Score = 48.5 bits (114), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 51/198 (25%), Positives = 88/198 (44%), Gaps = 26/198 (13%)
Query: 57 QGAFKSFIAECKALRNIRHRNLIKVLTACLGVDYQGNDFKALVYEFMHNRSLKEWLYPIS 116
+G + I E L+ + H N++K+L V + N LV+EF+H + LK+++ +
Sbjct: 47 EGVPSTAIREISLLKELNHPNIVKLLD----VIHTENKL-YLVFEFLH-QDLKKFM--DA 98
Query: 117 KEDETYKRPXXXXXXXXXXIAIDVASALNYLHHDCQPVTAHCVLKPSNVLLDDDMTARVG 176
P + + LH D LKP N+L++ + ++
Sbjct: 99 SALTGIPLPLIKSYLFQLLQGLAFCHSHRVLHRD---------LKPQNLLINTEGAIKLA 149
Query: 177 DFGLAR-FLPPTRTQTSSIDVKGSIGYIAPEYGVG-NEVSTIGDVYSYGILLLELMIREK 234
DFGLAR F P RT + ++ Y APE +G ST D++S G + E++ R
Sbjct: 150 DFGLARAFGVPVRTYXHEV---VTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRA 206
Query: 235 PSDIMFEGDMNLHKFAKM 252
+F GD + + ++
Sbjct: 207 ----LFPGDSEIDQLFRI 220
>pdb|4EOQ|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With Atp
pdb|4EOQ|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With Atp
Length = 301
Score = 48.5 bits (114), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 51/198 (25%), Positives = 88/198 (44%), Gaps = 26/198 (13%)
Query: 57 QGAFKSFIAECKALRNIRHRNLIKVLTACLGVDYQGNDFKALVYEFMHNRSLKEWLYPIS 116
+G + I E L+ + H N++K+L V + N LV+EF+H + LK+++ +
Sbjct: 46 EGVPSTAIREISLLKELNHPNIVKLL----DVIHTENKL-YLVFEFLH-QDLKKFM--DA 97
Query: 117 KEDETYKRPXXXXXXXXXXIAIDVASALNYLHHDCQPVTAHCVLKPSNVLLDDDMTARVG 176
P + + LH D LKP N+L++ + ++
Sbjct: 98 SALTGIPLPLIKSYLFQLLQGLAFCHSHRVLHRD---------LKPQNLLINTEGAIKLA 148
Query: 177 DFGLAR-FLPPTRTQTSSIDVKGSIGYIAPEYGVG-NEVSTIGDVYSYGILLLELMIREK 234
DFGLAR F P RT + ++ Y APE +G ST D++S G + E++ R
Sbjct: 149 DFGLARAFGVPVRTYXHEV---VTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRA 205
Query: 235 PSDIMFEGDMNLHKFAKM 252
+F GD + + ++
Sbjct: 206 ----LFPGDSEIDQLFRI 219
>pdb|4BCQ|A Chain A, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCQ|C Chain C, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 301
Score = 48.5 bits (114), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 51/198 (25%), Positives = 88/198 (44%), Gaps = 26/198 (13%)
Query: 57 QGAFKSFIAECKALRNIRHRNLIKVLTACLGVDYQGNDFKALVYEFMHNRSLKEWLYPIS 116
+G + I E L+ + H N++K+L V + N LV+EF+H + LK+++ +
Sbjct: 45 EGVPSTAIREISLLKELNHPNIVKLL----DVIHTENKL-YLVFEFLH-QDLKKFM--DA 96
Query: 117 KEDETYKRPXXXXXXXXXXIAIDVASALNYLHHDCQPVTAHCVLKPSNVLLDDDMTARVG 176
P + + LH D LKP N+L++ + ++
Sbjct: 97 SALTGIPLPLIKSYLFQLLQGLAFCHSHRVLHRD---------LKPQNLLINTEGAIKLA 147
Query: 177 DFGLAR-FLPPTRTQTSSIDVKGSIGYIAPEYGVG-NEVSTIGDVYSYGILLLELMIREK 234
DFGLAR F P RT + ++ Y APE +G ST D++S G + E++ R
Sbjct: 148 DFGLARAFGVPVRTYXHEV---VTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRA 204
Query: 235 PSDIMFEGDMNLHKFAKM 252
+F GD + + ++
Sbjct: 205 ----LFPGDSEIDQLFRI 218
>pdb|3LMG|A Chain A, Crystal Structure Of The Erbb3 Kinase Domain In Complex
With Amp-Pnp
pdb|3LMG|B Chain B, Crystal Structure Of The Erbb3 Kinase Domain In Complex
With Amp-Pnp
Length = 344
Score = 48.5 bits (114), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 42/172 (24%), Positives = 70/172 (40%), Gaps = 18/172 (10%)
Query: 59 AFKSFIAECKALRNIRHRNLIKVLTACLGVDYQGNDFKALVYEFMHNRSLKEWLYPISKE 118
+F++ A+ ++ H +++++L C G Q LV +++ SL
Sbjct: 76 SFQAVTDHMLAIGSLDHAHIVRLLGLCPGSSLQ------LVTQYLPLGSLL--------- 120
Query: 119 DETYKRPXXXXXXXXXXIAIDVASALNYLHHDCQPVTAHCVLKPSNVLLDDDMTARVGDF 178
D + + +A + YL H L NVLL +V DF
Sbjct: 121 DHVRQHRGALGPQLLLNWGVQIAKGMYYLEEHG---MVHRNLAARNVLLKSPSQVQVADF 177
Query: 179 GLARFLPPTRTQTSSIDVKGSIGYIAPEYGVGNEVSTIGDVYSYGILLLELM 230
G+A LPP Q + K I ++A E + + DV+SYG+ + ELM
Sbjct: 178 GVADLLPPDDKQLLYSEAKTPIKWMALESIHFGKYTHQSDVWSYGVTVWELM 229
>pdb|4EOS|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Ro3306
pdb|4EOS|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Ro3306
Length = 300
Score = 48.5 bits (114), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 51/198 (25%), Positives = 88/198 (44%), Gaps = 26/198 (13%)
Query: 57 QGAFKSFIAECKALRNIRHRNLIKVLTACLGVDYQGNDFKALVYEFMHNRSLKEWLYPIS 116
+G + I E L+ + H N++K+L V + N LV+EF+H + LK+++ +
Sbjct: 45 EGVPSTAIREISLLKELNHPNIVKLL----DVIHTENKL-YLVFEFLH-QDLKKFM--DA 96
Query: 117 KEDETYKRPXXXXXXXXXXIAIDVASALNYLHHDCQPVTAHCVLKPSNVLLDDDMTARVG 176
P + + LH D LKP N+L++ + ++
Sbjct: 97 SALTGIPLPLIKSYLFQLLQGLAFCHSHRVLHRD---------LKPQNLLINTEGAIKLA 147
Query: 177 DFGLAR-FLPPTRTQTSSIDVKGSIGYIAPEYGVG-NEVSTIGDVYSYGILLLELMIREK 234
DFGLAR F P RT + ++ Y APE +G ST D++S G + E++ R
Sbjct: 148 DFGLARAFGVPVRTYXHEV---VTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRA 204
Query: 235 PSDIMFEGDMNLHKFAKM 252
+F GD + + ++
Sbjct: 205 ----LFPGDSEIDQLFRI 218
>pdb|2R2P|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 5 (Epha5)
Length = 295
Score = 48.5 bits (114), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 47/186 (25%), Positives = 79/186 (42%), Gaps = 30/186 (16%)
Query: 50 GFSHLRRQGAFKSFIAECKALRNIRHRNLIK---VLTACLGVDYQGNDFKALVYEFMHNR 106
G++ +R + F+ E + H N+I V+T V +V E+M N
Sbjct: 61 GYTEKQR----RDFLGEASIMGQFDHPNIIHLEGVVTKSKPV--------MIVTEYMENG 108
Query: 107 SLKEWLYPISKEDETYKRPXXXXXXXXXXIAIDVASALNYLHHDCQPVTAHCVLKPSNVL 166
SL +L K D + + S + Y+H D L N+L
Sbjct: 109 SLDTFL---KKNDGQFTVIQLVGMLRGISAGMKYLSDMGYVHRD---------LAARNIL 156
Query: 167 LDDDMTARVGDFGLARFLP--PTRTQTSSIDVKGSIGYIAPEYGVGNEVSTIGDVYSYGI 224
++ ++ +V DFGL+R L P T+ K I + APE + ++ DV+SYGI
Sbjct: 157 INSNLVCKVSDFGLSRVLEDDPEAAYTTR-GGKIPIRWTAPEAIAFRKFTSASDVWSYGI 215
Query: 225 LLLELM 230
++ E++
Sbjct: 216 VMWEVV 221
>pdb|4EOP|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
pdb|4EOP|C Chain C, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
Length = 300
Score = 48.5 bits (114), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 51/198 (25%), Positives = 88/198 (44%), Gaps = 26/198 (13%)
Query: 57 QGAFKSFIAECKALRNIRHRNLIKVLTACLGVDYQGNDFKALVYEFMHNRSLKEWLYPIS 116
+G + I E L+ + H N++K+L V + N LV+EF+H + LK+++ +
Sbjct: 45 EGVPSTAIREISLLKELNHPNIVKLL----DVIHTENKL-YLVFEFLH-QDLKKFM--DA 96
Query: 117 KEDETYKRPXXXXXXXXXXIAIDVASALNYLHHDCQPVTAHCVLKPSNVLLDDDMTARVG 176
P + + LH D LKP N+L++ + ++
Sbjct: 97 SALTGIPLPLIKSYLFQLLQGLAFCHSHRVLHRD---------LKPENLLINTEGAIKLA 147
Query: 177 DFGLAR-FLPPTRTQTSSIDVKGSIGYIAPEYGVG-NEVSTIGDVYSYGILLLELMIREK 234
DFGLAR F P RT + ++ Y APE +G ST D++S G + E++ R
Sbjct: 148 DFGLARAFGVPVRTYXHEV---VTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRA 204
Query: 235 PSDIMFEGDMNLHKFAKM 252
+F GD + + ++
Sbjct: 205 ----LFPGDSEIDQLFRI 218
>pdb|2JGZ|A Chain A, Crystal Structure Of Phospho-Cdk2 In Complex With Cyclin B
Length = 289
Score = 48.5 bits (114), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 51/198 (25%), Positives = 88/198 (44%), Gaps = 26/198 (13%)
Query: 57 QGAFKSFIAECKALRNIRHRNLIKVLTACLGVDYQGNDFKALVYEFMHNRSLKEWLYPIS 116
+G + I E L+ + H N++K+L V + N LV+EF+H + LK+++ +
Sbjct: 43 EGVPSTAIREISLLKELNHPNIVKLL----DVIHTENKL-YLVFEFLH-QDLKKFM--DA 94
Query: 117 KEDETYKRPXXXXXXXXXXIAIDVASALNYLHHDCQPVTAHCVLKPSNVLLDDDMTARVG 176
P + + LH D LKP N+L++ + ++
Sbjct: 95 SALTGIPLPLIKSYLFQLLQGLAFCHSHRVLHRD---------LKPQNLLINTEGAIKLA 145
Query: 177 DFGLAR-FLPPTRTQTSSIDVKGSIGYIAPEYGVG-NEVSTIGDVYSYGILLLELMIREK 234
DFGLAR F P RT + ++ Y APE +G ST D++S G + E++ R
Sbjct: 146 DFGLARAFGVPVRTYXHEV---VTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRA 202
Query: 235 PSDIMFEGDMNLHKFAKM 252
+F GD + + ++
Sbjct: 203 ----LFPGDSEIDQLFRI 216
>pdb|1K3A|A Chain A, Structure Of The Insulin-Like Growth Factor 1 Receptor
Kinase
Length = 299
Score = 48.5 bits (114), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 40/174 (22%), Positives = 77/174 (44%), Gaps = 9/174 (5%)
Query: 63 FIAECKALRNIRHRNLIKVLTACLGVDYQGNDFKALVYEFMHNRSLKEWLYPISKEDETY 122
F+ E ++ +++++L GV QG ++ E M LK +L + E E
Sbjct: 60 FLNEASVMKEFNCHHVVRLL----GVVSQGQP-TLVIMELMTRGDLKSYLRSLRPEMENN 114
Query: 123 KRPXXXXXXXXXXIAIDVASALNYLHHDCQPVTAHCVLKPSNVLLDDDMTARVGDFGLAR 182
+A ++A + YL+ + H L N ++ +D T ++GDFG+ R
Sbjct: 115 PVLAPPSLSKMIQMAGEIADGMAYLNANK---FVHRDLAARNCMVAEDFTVKIGDFGMTR 171
Query: 183 FLPPTRTQTSSIDVKGSIGYIAPEYGVGNEVSTIGDVYSYGILLLEL-MIREKP 235
+ T + +++PE +T DV+S+G++L E+ + E+P
Sbjct: 172 DIXETDXXRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQP 225
>pdb|3QHR|A Chain A, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHR|C Chain C, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHW|A Chain A, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHW|C Chain C, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
Length = 298
Score = 48.5 bits (114), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 51/198 (25%), Positives = 88/198 (44%), Gaps = 26/198 (13%)
Query: 57 QGAFKSFIAECKALRNIRHRNLIKVLTACLGVDYQGNDFKALVYEFMHNRSLKEWLYPIS 116
+G + I E L+ + H N++K+L V + N LV+EF+H + LK+++ +
Sbjct: 44 EGVPSTAIREISLLKELNHPNIVKLL----DVIHTENKL-YLVFEFLH-QDLKKFM--DA 95
Query: 117 KEDETYKRPXXXXXXXXXXIAIDVASALNYLHHDCQPVTAHCVLKPSNVLLDDDMTARVG 176
P + + LH D LKP N+L++ + ++
Sbjct: 96 SALTGIPLPLIKSYLFQLLQGLAFCHSHRVLHRD---------LKPQNLLINTEGAIKLA 146
Query: 177 DFGLAR-FLPPTRTQTSSIDVKGSIGYIAPEYGVG-NEVSTIGDVYSYGILLLELMIREK 234
DFGLAR F P RT + ++ Y APE +G ST D++S G + E++ R
Sbjct: 147 DFGLARAFGVPVRTYXHEV---VTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRA 203
Query: 235 PSDIMFEGDMNLHKFAKM 252
+F GD + + ++
Sbjct: 204 ----LFPGDSEIDQLFRI 217
>pdb|3KEX|A Chain A, Crystal Structure Of The Catalytically Inactive Kinase
Domain Of The Human Epidermal Growth Factor Receptor 3
(Her3)
pdb|3KEX|B Chain B, Crystal Structure Of The Catalytically Inactive Kinase
Domain Of The Human Epidermal Growth Factor Receptor 3
(Her3)
Length = 325
Score = 48.1 bits (113), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 42/172 (24%), Positives = 70/172 (40%), Gaps = 18/172 (10%)
Query: 59 AFKSFIAECKALRNIRHRNLIKVLTACLGVDYQGNDFKALVYEFMHNRSLKEWLYPISKE 118
+F++ A+ ++ H +++++L C G Q LV +++ SL
Sbjct: 58 SFQAVTDHMLAIGSLDHAHIVRLLGLCPGSSLQ------LVTQYLPLGSLL--------- 102
Query: 119 DETYKRPXXXXXXXXXXIAIDVASALNYLHHDCQPVTAHCVLKPSNVLLDDDMTARVGDF 178
D + + +A + YL H L NVLL +V DF
Sbjct: 103 DHVRQHRGALGPQLLLNWGVQIAKGMYYLEEHG---MVHRNLAARNVLLKSPSQVQVADF 159
Query: 179 GLARFLPPTRTQTSSIDVKGSIGYIAPEYGVGNEVSTIGDVYSYGILLLELM 230
G+A LPP Q + K I ++A E + + DV+SYG+ + ELM
Sbjct: 160 GVADLLPPDDKQLLYSEAKTPIKWMALESIHFGKYTHQSDVWSYGVTVWELM 211
>pdb|3QUP|A Chain A, Inhibitor Bound Structure Of The Kinase Domain Of The
Murine Receptor Tyrosine Kinase Tyro3 (Sky)
Length = 323
Score = 48.1 bits (113), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 39/175 (22%), Positives = 73/175 (41%), Gaps = 12/175 (6%)
Query: 61 KSFIAECKALRNIRHRNLIKVLTACLGVDYQGN-DFKALVYEFMHNRSLKEWLYPISKED 119
+ F+ E ++ H ++ K++ L +G ++ FM + L +L +
Sbjct: 70 EEFLREAACMKEFDHPHVAKLVGVSLRSRAKGRLPIPMVILPFMKHGDLHAFLLASRIGE 129
Query: 120 ETYKRPXXXXXXXXXXIA--IDVASALNYLHHDCQPVTAHCVLKPSNVLLDDDMTARVGD 177
+ P IA ++ S+ N++H D L N +L +DMT V D
Sbjct: 130 NPFNLPLQTLVRFMVDIACGMEYLSSRNFIHRD---------LAARNCMLAEDMTVCVAD 180
Query: 178 FGLARFLPPTRTQTSSIDVKGSIGYIAPEYGVGNEVSTIGDVYSYGILLLELMIR 232
FGL+R + K + ++A E N + DV+++G+ + E+M R
Sbjct: 181 FGLSRKIYSGDYYRQGCASKLPVKWLALESLADNLYTVHSDVWAFGVTMWEIMTR 235
>pdb|2YZA|A Chain A, Crystal Structure Of Kinase Domain Of Human
5'-Amp-Activated Protein Kinase Alpha-2 Subunit Mutant
(T172d)
pdb|3AQV|A Chain A, Human Amp-Activated Protein Kinase Alpha 2 Subunit Kinase
Domain (T172d) Complexed With Compound C
Length = 276
Score = 48.1 bits (113), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 50/177 (28%), Positives = 78/177 (44%), Gaps = 30/177 (16%)
Query: 66 ECKALRNIRHRNLIKVLTACLGVDYQGNDFKALVYEFMHNRSLKEWLYPISKEDETYKRP 125
E + L+ RH ++IK+ V DF +V E++ L +++ + +E R
Sbjct: 61 EIQNLKLFRHPHIIKLYQ----VISTPTDF-FMVMEYVSGGELFDYICKHGRVEEMEAR- 114
Query: 126 XXXXXXXXXXIAIDVASALNYLHHDCQPVTAHCVLKPSNVLLDDDMTARVGDFGLARFLP 185
+ + SA++Y H + + H LKP NVLLD M A++ DFGL+ +
Sbjct: 115 ---------RLFQQILSAVDYCH---RHMVVHRDLKPENVLLDAHMNAKIADFGLSNMMS 162
Query: 186 PTRTQTSSIDVKGSIGYIAPE-----YGVGNEVSTIGDVYSYGILLLELMIREKPSD 237
S GS Y APE G EV D++S G++L L+ P D
Sbjct: 163 DGEFLRDSC---GSPNYAAPEVISGRLYAGPEV----DIWSCGVILYALLCGTLPFD 212
>pdb|2ZM3|A Chain A, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|B Chain B, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|C Chain C, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|D Chain D, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|3F5P|A Chain A, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|B Chain B, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|C Chain C, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|D Chain D, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|E Chain E, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|F Chain F, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|G Chain G, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|H Chain H, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|I Chain I, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|J Chain J, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|K Chain K, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|M Chain M, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|L Chain L, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|R Chain R, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|S Chain S, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|T Chain T, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
Length = 308
Score = 48.1 bits (113), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 40/174 (22%), Positives = 77/174 (44%), Gaps = 9/174 (5%)
Query: 63 FIAECKALRNIRHRNLIKVLTACLGVDYQGNDFKALVYEFMHNRSLKEWLYPISKEDETY 122
F+ E ++ +++++L GV QG ++ E M LK +L + E E
Sbjct: 69 FLNEASVMKEFNCHHVVRLL----GVVSQGQP-TLVIMELMTRGDLKSYLRSLRPEMENN 123
Query: 123 KRPXXXXXXXXXXIAIDVASALNYLHHDCQPVTAHCVLKPSNVLLDDDMTARVGDFGLAR 182
+A ++A + YL+ + H L N ++ +D T ++GDFG+ R
Sbjct: 124 PVLAPPSLSKMIQMAGEIADGMAYLNANK---FVHRDLAARNCMVAEDFTVKIGDFGMTR 180
Query: 183 FLPPTRTQTSSIDVKGSIGYIAPEYGVGNEVSTIGDVYSYGILLLEL-MIREKP 235
+ T + +++PE +T DV+S+G++L E+ + E+P
Sbjct: 181 DIXETDXXRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQP 234
>pdb|2A19|B Chain B, Pkr Kinase Domain- Eif2alpha- Amp-Pnp Complex.
pdb|2A19|C Chain C, Pkr Kinase Domain- Eif2alpha- Amp-Pnp Complex.
pdb|2A1A|B Chain B, Pkr Kinase Domain-Eif2alpha Complex
Length = 284
Score = 48.1 bits (113), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 42/176 (23%), Positives = 73/176 (41%), Gaps = 25/176 (14%)
Query: 66 ECKALRNIRHRNLIKVLTACLGVDY-----QGNDFKA------LVYEFMHNRSLKEWLYP 114
E KAL + H N++ G DY N ++ + EF +L++W+
Sbjct: 54 EVKALAKLDHVNIVHYNGCWDGFDYDPETSSKNSSRSKTKCLFIQMEFCDKGTLEQWIEK 113
Query: 115 ISKEDETYKRPXXXXXXXXXXIAIDVASALNYLHHDCQPVTAHCVLKPSNVLLDDDMTAR 174
+R + + ++Y+H + LKPSN+ L D +
Sbjct: 114 --------RRGEKLDKVLALELFEQITKGVDYIH---SKKLINRDLKPSNIFLVDTKQVK 162
Query: 175 VGDFGLARFLPPTRTQTSSIDVKGSIGYIAPEYGVGNEVSTIGDVYSYGILLLELM 230
+GDFGL L + S KG++ Y++PE + D+Y+ G++L EL+
Sbjct: 163 IGDFGLVTSLKNDGKRXRS---KGTLRYMSPEQISSQDYGKEVDLYALGLILAELL 215
>pdb|2REI|A Chain A, Kinase Domain Of Human Ephrin Type-a Receptor 7 (epha7)
pdb|3DKO|A Chain A, Complex Between The Kinase Domain Of Human Ephrin Type-A
Receptor 7 (Epha7) And Inhibitor Alw-Ii-49-7
Length = 318
Score = 48.1 bits (113), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 44/183 (24%), Positives = 81/183 (44%), Gaps = 24/183 (13%)
Query: 50 GFSHLRRQGAFKSFIAECKALRNIRHRNLIKVLTACLGVDYQGNDFKALVYEFMHNRSLK 109
G++ +R + F+ E + H N++ + GV +G +V EFM N +L
Sbjct: 82 GYTEKQR----RDFLCEASIMGQFDHPNVVHLE----GVVTRGKPV-MIVIEFMENGALD 132
Query: 110 EWLYPISKEDETYKRPXXXXXXXXXXIAIDVASALNYLHHDCQPVTAHCVLKPSNVLLDD 169
+L K D + + + + Y+H D L N+L++
Sbjct: 133 AFL---RKHDGQFTVIQLVGMLRGIAAGMRYLADMGYVHRD---------LAARNILVNS 180
Query: 170 DMTARVGDFGLARFLP--PTRTQTSSIDVKGSIGYIAPEYGVGNEVSTIGDVYSYGILLL 227
++ +V DFGL+R + P T++ K + + APE + ++ DV+SYGI++
Sbjct: 181 NLVCKVSDFGLSRVIEDDPEAVYTTT-GGKIPVRWTAPEAIQYRKFTSASDVWSYGIVMW 239
Query: 228 ELM 230
E+M
Sbjct: 240 EVM 242
>pdb|3D5U|A Chain A, Crystal Structure Of A Wildtype Polo-Like Kinase 1 (Plk1)
Catalytic Domain
Length = 317
Score = 48.1 bits (113), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 42/149 (28%), Positives = 63/149 (42%), Gaps = 21/149 (14%)
Query: 90 YQGNDFKALVYEFMHNRSLKEWLYPISKEDETYKRPXXXXXXXXXXIAIDVASALNYLHH 149
++ +DF +V E RSL E +KR + YLH+
Sbjct: 111 FEDDDFVYVVLEICRRRSLLEL----------HKRRKAVTEPEARYFMRQTIQGVQYLHN 160
Query: 150 DCQPVTAHCVLKPSNVLLDDDMTARVGDFGLARFLPPTRTQTSSIDVK---GSIGYIAPE 206
+ H LK N+ L+DDM ++GDFGLA T+ + K G+ YIAPE
Sbjct: 161 N---RVIHRDLKLGNLFLNDDMDVKIGDFGLA-----TKIEFDGERKKTLCGTPNYIAPE 212
Query: 207 YGVGNEVSTIGDVYSYGILLLELMIREKP 235
S D++S G +L L++ + P
Sbjct: 213 VLCKKGHSFEVDIWSLGCILYTLLVGKPP 241
>pdb|2PK9|A Chain A, Structure Of The Pho85-pho80 Cdk-cyclin Complex Of The
Phosphate-responsive Signal Transduction Pathway
pdb|2PK9|C Chain C, Structure Of The Pho85-pho80 Cdk-cyclin Complex Of The
Phosphate-responsive Signal Transduction Pathway
pdb|2PMI|A Chain A, Structure Of The Pho85-Pho80 Cdk-Cyclin Complex Of The
Phosphate- Responsive Signal Transduction Pathway With
Bound Atp-Gamma-S
pdb|2PMI|C Chain C, Structure Of The Pho85-Pho80 Cdk-Cyclin Complex Of The
Phosphate- Responsive Signal Transduction Pathway With
Bound Atp-Gamma-S
Length = 317
Score = 47.8 bits (112), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 52/188 (27%), Positives = 86/188 (45%), Gaps = 22/188 (11%)
Query: 57 QGAFKSFIAECKALRNIRHRNLIKVLTACLGVDYQGNDFKALVYEFMHNRSLKEWLYPIS 116
+G + I E ++ ++H N++++ V + N LV+EFM N LK+++
Sbjct: 44 EGTPSTAIREISLMKELKHENIVRLYD----VIHTENKL-TLVFEFMDN-DLKKYM---- 93
Query: 117 KEDETYKRPXXXXXXXXXXIAIDVASALNYLHHDCQPVTAHCVLKPSNVLLDDDMTARVG 176
P + L + H + H LKP N+L++ ++G
Sbjct: 94 DSRTVGNTPRGLELNLVKYFQWQLLQGLAFCHENK---ILHRDLKPQNLLINKRGQLKLG 150
Query: 177 DFGLAR-FLPPTRTQTSSIDVKGSIGYIAPEYGVGNEV-STIGDVYSYGILLLELMIREK 234
DFGLAR F P T +S + ++ Y AP+ +G+ ST D++S G +L E MI K
Sbjct: 151 DFGLARAFGIPVNTFSSEVV---TLWYRAPDVLMGSRTYSTSIDIWSCGCILAE-MITGK 206
Query: 235 PSDIMFEG 242
P +F G
Sbjct: 207 P---LFPG 211
>pdb|3D5W|A Chain A, Crystal Structure Of A Phosphorylated Polo-Like Kinase 1
(Plk1) Catalytic Domain In Complex With Adp
Length = 317
Score = 47.8 bits (112), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 42/149 (28%), Positives = 63/149 (42%), Gaps = 21/149 (14%)
Query: 90 YQGNDFKALVYEFMHNRSLKEWLYPISKEDETYKRPXXXXXXXXXXIAIDVASALNYLHH 149
++ +DF +V E RSL E +KR + YLH+
Sbjct: 111 FEDDDFVYVVLEICRRRSLLEL----------HKRRKAVTEPEARYFMRQTIQGVQYLHN 160
Query: 150 DCQPVTAHCVLKPSNVLLDDDMTARVGDFGLARFLPPTRTQTSSIDVK---GSIGYIAPE 206
+ H LK N+ L+DDM ++GDFGLA T+ + K G+ YIAPE
Sbjct: 161 N---RVIHRDLKLGNLFLNDDMDVKIGDFGLA-----TKIEFDGERKKXLCGTPNYIAPE 212
Query: 207 YGVGNEVSTIGDVYSYGILLLELMIREKP 235
S D++S G +L L++ + P
Sbjct: 213 VLCKKGHSFEVDIWSLGCILYTLLVGKPP 241
>pdb|2IW6|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW6|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW9|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW9|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
Length = 302
Score = 47.8 bits (112), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 51/198 (25%), Positives = 87/198 (43%), Gaps = 26/198 (13%)
Query: 57 QGAFKSFIAECKALRNIRHRNLIKVLTACLGVDYQGNDFKALVYEFMHNRSLKEWLYPIS 116
+G + I E L+ + H N++K+L V + N LV+EF+H + LK ++ +
Sbjct: 46 EGVPSTAIREISLLKELNHPNIVKLLD----VIHTENKL-YLVFEFLH-QDLKTFM--DA 97
Query: 117 KEDETYKRPXXXXXXXXXXIAIDVASALNYLHHDCQPVTAHCVLKPSNVLLDDDMTARVG 176
P + + LH D LKP N+L++ + ++
Sbjct: 98 SALTGIPLPLIKSYLFQLLQGLAFCHSHRVLHRD---------LKPQNLLINTEGAIKLA 148
Query: 177 DFGLAR-FLPPTRTQTSSIDVKGSIGYIAPEYGVG-NEVSTIGDVYSYGILLLELMIREK 234
DFGLAR F P RT + ++ Y APE +G ST D++S G + E++ R
Sbjct: 149 DFGLARAFGVPVRTYXHEV---VTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRA 205
Query: 235 PSDIMFEGDMNLHKFAKM 252
+F GD + + ++
Sbjct: 206 ----LFPGDSEIDQLFRI 219
>pdb|1GII|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|1GIJ|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|2DS1|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
Length = 298
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 32/98 (32%), Positives = 52/98 (53%), Gaps = 9/98 (9%)
Query: 157 HCVLKPSNVLLDDDMTARVGDFGLAR-FLPPTRTQTSSIDVKGSIGYIAPEYGVG-NEVS 214
H LKP N+L++ + ++ DFGLAR F P RT T + ++ Y APE +G S
Sbjct: 125 HRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEV---VTLWYRAPEILLGCKYYS 181
Query: 215 TIGDVYSYGILLLELMIREKPSDIMFEGDMNLHKFAKM 252
T D++S G + E++ R +F GD + + ++
Sbjct: 182 TAVDIWSLGCIFAEMVTRRA----LFPGDSEIDQLFRI 215
>pdb|1ZRZ|A Chain A, Crystal Structure Of The Catalytic Domain Of Atypical
Protein Kinase C-Iota
Length = 364
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 32/107 (29%), Positives = 54/107 (50%), Gaps = 5/107 (4%)
Query: 137 AIDVASALNYLHHDCQPVTAHCVLKPSNVLLDDDMTARVGDFGLARFLPPTRTQTSSIDV 196
+ +++ ALNYLH + + LK NVLLD + ++ D+G+ + R ++
Sbjct: 127 SAEISLALNYLH---ERGIIYRDLKLDNVLLDSEGHIKLTDYGMCK--EGLRPGDTTSXF 181
Query: 197 KGSIGYIAPEYGVGNEVSTIGDVYSYGILLLELMIREKPSDIMFEGD 243
G+ YIAPE G + D ++ G+L+ E+M P DI+ D
Sbjct: 182 CGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGSSD 228
>pdb|4DC2|A Chain A, Structure Of Pkc In Complex With A Substrate Peptide From
Par-3
Length = 396
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 34/108 (31%), Positives = 55/108 (50%), Gaps = 7/108 (6%)
Query: 137 AIDVASALNYLHHDCQPVTAHCVLKPSNVLLDDDMTARVGDFGLAR-FLPPTRTQTSSID 195
+ +++ ALNYLH + LK NVLLD + ++ D+G+ + L P T ++
Sbjct: 159 SAEISLALNYLHERG---IIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRPGDTTSTFC- 214
Query: 196 VKGSIGYIAPEYGVGNEVSTIGDVYSYGILLLELMIREKPSDIMFEGD 243
G+ YIAPE G + D ++ G+L+ E+M P DI+ D
Sbjct: 215 --GTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGSSD 260
>pdb|2ZV7|A Chain A, Lyn Tyrosine Kinase Domain, Apo Form
pdb|2ZV8|A Chain A, Lyn Tyrosine Kinase Domain-Amp-Pnp Complex
pdb|2ZV9|A Chain A, Lyn Tyrosine Kinase Domain-Pp2 Complex
pdb|2ZVA|A Chain A, Lyn Tyrosine Kinase Domain-dasatinib Complex
Length = 279
Score = 47.4 bits (111), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 45/176 (25%), Positives = 78/176 (44%), Gaps = 21/176 (11%)
Query: 61 KSFIAECKALRNIRHRNLIKVLTACLGVDYQGNDFKALVYEFMHNRSLKEWLYPISKEDE 120
++F+ E ++ ++H L+++ + ++ EFM SL ++L K DE
Sbjct: 52 QAFLEEANLMKTLQHDKLVRLYAVV-----TKEEPIYIITEFMAKGSLLDFL----KSDE 102
Query: 121 TYKRPXXXXXXXXXXIAIDVA--SALNYLHHDCQPVTAHCVLKPSNVLLDDDMTARVGDF 178
K IA +A NY+H D L+ +NVL+ + + ++ DF
Sbjct: 103 GGKVLLPKLIDFSAQIAEGMAYIERKNYIHRD---------LRAANVLVSESLMCKIADF 153
Query: 179 GLARFLPPTRTQTSSIDVKGSIGYIAPEYGVGNEVSTIGDVYSYGILLLELMIREK 234
GLAR + T+ K I + APE + +V+S+GILL E++ K
Sbjct: 154 GLARVIEDNE-YTAREGAKFPIKWTAPEAINFGCFTIKSNVWSFGILLYEIVTYGK 208
>pdb|3ZH8|A Chain A, A Novel Small Molecule Apkc Inhibitor
pdb|3ZH8|B Chain B, A Novel Small Molecule Apkc Inhibitor
pdb|3ZH8|C Chain C, A Novel Small Molecule Apkc Inhibitor
Length = 349
Score = 47.4 bits (111), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 32/107 (29%), Positives = 53/107 (49%), Gaps = 5/107 (4%)
Query: 137 AIDVASALNYLHHDCQPVTAHCVLKPSNVLLDDDMTARVGDFGLARFLPPTRTQTSSIDV 196
+ +++ ALNYLH + LK NVLLD + ++ D+G+ + R ++
Sbjct: 112 SAEISLALNYLHERG---IIYRDLKLDNVLLDSEGHIKLTDYGMCK--EGLRPGDTTSXF 166
Query: 197 KGSIGYIAPEYGVGNEVSTIGDVYSYGILLLELMIREKPSDIMFEGD 243
G+ YIAPE G + D ++ G+L+ E+M P DI+ D
Sbjct: 167 CGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGSSD 213
>pdb|3A4O|X Chain X, Lyn Kinase Domain
Length = 286
Score = 47.4 bits (111), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 48/187 (25%), Positives = 82/187 (43%), Gaps = 24/187 (12%)
Query: 61 KSFIAECKALRNIRHRNLIKVLTACLGVDYQGNDFKALVYEFMHNRSLKEWLYPISKEDE 120
++F+ E ++ ++H L+++ + ++ E+M SL ++L K DE
Sbjct: 53 QAFLEEANLMKTLQHDKLVRLYAVV-----TREEPIYIITEYMAKGSLLDFL----KSDE 103
Query: 121 TYKRPXXXXXXXXXXIAIDVA--SALNYLHHDCQPVTAHCVLKPSNVLLDDDMTARVGDF 178
K IA +A NY+H D L+ +NVL+ + + ++ DF
Sbjct: 104 GGKVLLPKLIDFSAQIAEGMAYIERKNYIHRD---------LRAANVLVSESLMCKIADF 154
Query: 179 GLARFLPPTRTQTSSIDVKGSIGYIAPEYGVGNEVSTIGDVYSYGILLLELMIREKPSDI 238
GLAR + T+ K I + APE + DV+S+GILL E++ K I
Sbjct: 155 GLARVIEDNE-YTAREGAKFPIKWTAPEAINFGCFTIKSDVWSFGILLYEIVTYGK---I 210
Query: 239 MFEGDMN 245
+ G N
Sbjct: 211 PYPGRTN 217
>pdb|2B9H|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Ste7
pdb|2B9I|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Msg5
pdb|2B9J|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Far1
pdb|2F49|A Chain A, Crystal Structure Of Fus3 In Complex With A Ste5 Peptide
pdb|2F49|B Chain B, Crystal Structure Of Fus3 In Complex With A Ste5 Peptide
pdb|2FA2|A Chain A, Crystal Structure Of Fus3 Without A Peptide From Ste5
pdb|2FA2|B Chain B, Crystal Structure Of Fus3 Without A Peptide From Ste5
Length = 353
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 34/105 (32%), Positives = 52/105 (49%), Gaps = 18/105 (17%)
Query: 137 AIDVASALNYLHHDCQPVTAHCVLKPSNVLLDDDMTARVGDFGLARFL--------PPTR 188
A+ V N +H D LKPSN+L++ + +V DFGLAR + PT
Sbjct: 124 AVKVLHGSNVIHRD---------LKPSNLLINSNCDLKVCDFGLARIIDESAADNSEPTG 174
Query: 189 TQTSSIDVKGSIGYIAPEYGVGN-EVSTIGDVYSYGILLLELMIR 232
Q+ ++ + Y APE + + + S DV+S G +L EL +R
Sbjct: 175 QQSGMVEFVATRWYRAPEVMLTSAKYSRAMDVWSCGCILAELFLR 219
>pdb|2Z8C|A Chain A, Phosphorylated Insulin Receptor Tyrosine Kinase In Complex
With (4-{[5-Carbamoyl-4-(3-Methylanilino)pyrimidin-2-
Yl]amino}phenyl)acetic Acid
Length = 303
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 40/174 (22%), Positives = 76/174 (43%), Gaps = 9/174 (5%)
Query: 63 FIAECKALRNIRHRNLIKVLTACLGVDYQGNDFKALVYEFMHNRSLKEWLYPISKEDETY 122
F+ E ++ +++++L GV +G +V E M + LK +L + E E
Sbjct: 64 FLNEASVMKGFTCHHVVRLL----GVVSKGQP-TLVVMELMAHGDLKSYLRSLRPEAENN 118
Query: 123 KRPXXXXXXXXXXIAIDVASALNYLHHDCQPVTAHCVLKPSNVLLDDDMTARVGDFGLAR 182
+A ++A + YL+ H L N ++ D T ++GDFG+ R
Sbjct: 119 PGRPPPTLQEMIQMAAEIADGMAYLNAK---KFVHRDLAARNCMVAHDFTVKIGDFGMTR 175
Query: 183 FLPPTRTQTSSIDVKGSIGYIAPEYGVGNEVSTIGDVYSYGILLLELM-IREKP 235
+ T + ++APE +T D++S+G++L E+ + E+P
Sbjct: 176 DIXETDXXRKGGKGLLPVRWMAPESLKDGVFTTSSDMWSFGVVLWEITSLAEQP 229
>pdb|3GQI|A Chain A, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
Length = 326
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 44/180 (24%), Positives = 79/180 (43%), Gaps = 21/180 (11%)
Query: 60 FKSFIAECKALRNI-RHRNLIKVLTACLGVDYQGNDFKALVYEFMHNRSLKEWLY---PI 115
I+E + ++ I +H+N+I +L AC Q +V E+ +L+E+L P
Sbjct: 77 LSDLISEMEMMKMIGKHKNIINLLGACT----QDGPLYVIV-EYASKGNLREYLQARRPP 131
Query: 116 SKE---DETYKRPXXXXXXXXXXIAIDVASALNYLHHDCQPVTAHCV---LKPSNVLLDD 169
E + ++ A VA + YL + C+ L NVL+ +
Sbjct: 132 GLEFSFNPSHNPEEQLSSKDLVSCAYQVARGMEYL------ASKKCIHRDLAARNVLVTE 185
Query: 170 DMTARVGDFGLARFLPPTRTQTSSIDVKGSIGYIAPEYGVGNEVSTIGDVYSYGILLLEL 229
D ++ DFGLAR + + + + + ++APE + DV+S+G+LL E+
Sbjct: 186 DNVMKIADFGLARDIHHIDXXKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEI 245
>pdb|3A8W|A Chain A, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8W|B Chain B, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8X|A Chain A, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8X|B Chain B, Crystal Structure Of Pkciota Kinase Domain
Length = 345
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 32/107 (29%), Positives = 53/107 (49%), Gaps = 5/107 (4%)
Query: 137 AIDVASALNYLHHDCQPVTAHCVLKPSNVLLDDDMTARVGDFGLARFLPPTRTQTSSIDV 196
+ +++ ALNYLH + LK NVLLD + ++ D+G+ + R ++
Sbjct: 116 SAEISLALNYLHERG---IIYRDLKLDNVLLDSEGHIKLTDYGMCK--EGLRPGDTTSXF 170
Query: 197 KGSIGYIAPEYGVGNEVSTIGDVYSYGILLLELMIREKPSDIMFEGD 243
G+ YIAPE G + D ++ G+L+ E+M P DI+ D
Sbjct: 171 CGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGSSD 217
>pdb|1IR3|A Chain A, Phosphorylated Insulin Receptor Tyrosine Kinase In Complex
With Peptide Substrate And Atp Analog
pdb|1GAG|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With A Bisubstrate Inhibitor
Length = 306
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 40/174 (22%), Positives = 76/174 (43%), Gaps = 9/174 (5%)
Query: 63 FIAECKALRNIRHRNLIKVLTACLGVDYQGNDFKALVYEFMHNRSLKEWLYPISKEDETY 122
F+ E ++ +++++L GV +G +V E M + LK +L + E E
Sbjct: 67 FLNEASVMKGFTCHHVVRLL----GVVSKGQP-TLVVMELMAHGDLKSYLRSLRPEAENN 121
Query: 123 KRPXXXXXXXXXXIAIDVASALNYLHHDCQPVTAHCVLKPSNVLLDDDMTARVGDFGLAR 182
+A ++A + YL+ H L N ++ D T ++GDFG+ R
Sbjct: 122 PGRPPPTLQEMIQMAAEIADGMAYLNAKK---FVHRDLAARNCMVAHDFTVKIGDFGMTR 178
Query: 183 FLPPTRTQTSSIDVKGSIGYIAPEYGVGNEVSTIGDVYSYGILLLELM-IREKP 235
+ T + ++APE +T D++S+G++L E+ + E+P
Sbjct: 179 DIXETDXXRKGGKGLLPVRWMAPESLKDGVFTTSSDMWSFGVVLWEITSLAEQP 232
>pdb|1RQQ|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With The Sh2 Domain Of Aps
pdb|1RQQ|B Chain B, Crystal Structure Of The Insulin Receptor Kinase In
Complex With The Sh2 Domain Of Aps
pdb|2AUH|A Chain A, Crystal Structure Of The Grb14 Bps Region In Complex With
The Insulin Receptor Tyrosine Kinase
pdb|2B4S|B Chain B, Crystal Structure Of A Complex Between Ptp1b And The
Insulin Receptor Tyrosine Kinase
pdb|2B4S|D Chain D, Crystal Structure Of A Complex Between Ptp1b And The
Insulin Receptor Tyrosine Kinase
pdb|3BU3|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Peptide
pdb|3BU5|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Peptide And Atp
pdb|3BU6|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Phosphopeptide
Length = 306
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 40/174 (22%), Positives = 76/174 (43%), Gaps = 9/174 (5%)
Query: 63 FIAECKALRNIRHRNLIKVLTACLGVDYQGNDFKALVYEFMHNRSLKEWLYPISKEDETY 122
F+ E ++ +++++L GV +G +V E M + LK +L + E E
Sbjct: 67 FLNEASVMKGFTCHHVVRLL----GVVSKGQP-TLVVMELMAHGDLKSYLRSLRPEAENN 121
Query: 123 KRPXXXXXXXXXXIAIDVASALNYLHHDCQPVTAHCVLKPSNVLLDDDMTARVGDFGLAR 182
+A ++A + YL+ H L N ++ D T ++GDFG+ R
Sbjct: 122 PGRPPPTLQEMIQMAAEIADGMAYLNAK---KFVHRDLAARNCMVAHDFTVKIGDFGMTR 178
Query: 183 FLPPTRTQTSSIDVKGSIGYIAPEYGVGNEVSTIGDVYSYGILLLELM-IREKP 235
+ T + ++APE +T D++S+G++L E+ + E+P
Sbjct: 179 DIXETDXXRKGGKGLLPVRWMAPESLKDGVFTTSSDMWSFGVVLWEITSLAEQP 232
>pdb|3QQU|A Chain A, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|B Chain B, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|C Chain C, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|D Chain D, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
Length = 301
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 40/174 (22%), Positives = 77/174 (44%), Gaps = 9/174 (5%)
Query: 63 FIAECKALRNIRHRNLIKVLTACLGVDYQGNDFKALVYEFMHNRSLKEWLYPISKEDETY 122
F+ E ++ +++++L GV QG ++ E M LK +L + E E
Sbjct: 62 FLNEASVMKEFNCHHVVRLL----GVVSQGQP-TLVIMELMTRGDLKSYLRSLRPEMENN 116
Query: 123 KRPXXXXXXXXXXIAIDVASALNYLHHDCQPVTAHCVLKPSNVLLDDDMTARVGDFGLAR 182
+A ++A + YL+ + H L N ++ +D T ++GDFG+ R
Sbjct: 117 PVLAPPSLSKMIQMAGEIADGMAYLNANK---FVHRDLAARNCMVAEDFTVKIGDFGMTR 173
Query: 183 FLPPTRTQTSSIDVKGSIGYIAPEYGVGNEVSTIGDVYSYGILLLEL-MIREKP 235
+ T + +++PE +T DV+S+G++L E+ + E+P
Sbjct: 174 DIYETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQP 227
>pdb|2Y94|A Chain A, Structure Of An Active Form Of Mammalian Ampk
Length = 476
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 33/99 (33%), Positives = 48/99 (48%), Gaps = 7/99 (7%)
Query: 140 VASALNYLHHDCQPVTAHCVLKPSNVLLDDDMTARVGDFGLARFLPPTRTQTSSIDVKGS 199
+ S ++Y H + + H LKP NVLLD M A++ DFGL+ + S GS
Sbjct: 125 ILSGVDYCH---RHMVVHRDLKPENVLLDAHMNAKIADFGLSNMMSDGEFLRXSC---GS 178
Query: 200 IGYIAPEYGVGNEVSTIG-DVYSYGILLLELMIREKPSD 237
Y APE G + D++S G++L L+ P D
Sbjct: 179 PNYAAPEVISGRLYAGPEVDIWSSGVILYALLCGTLPFD 217
>pdb|2QON|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:y742a Triple Mutant
Length = 373
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 51/186 (27%), Positives = 82/186 (44%), Gaps = 30/186 (16%)
Query: 50 GFSHLRRQGAFKSFIAECKALRNIRHRNLIK---VLTACLGVDYQGNDFKALVYEFMHNR 106
G++ +R + F+ E + H N+I+ V+T V +V E M N
Sbjct: 84 GYTEKQR----RDFLGEASIMGQFDHPNIIRLEGVVTKSKPV--------MIVTEXMENG 131
Query: 107 SLKEWLYPISKEDETYKRPXXXXXXXXXXIAIDVASALNYLHHDCQPVTAHCVLKPSNVL 166
SL +L K D + + +AS + YL D V H L N+L
Sbjct: 132 SLDSFL---RKHDAQF------TVIQLVGMLRGIASGMKYLS-DMGAV--HRDLAARNIL 179
Query: 167 LDDDMTARVGDFGLARFLP--PTRTQTSSIDVKGSIGYIAPEYGVGNEVSTIGDVYSYGI 224
++ ++ +V DFGL+R L P T+ K I + +PE + ++ DV+SYGI
Sbjct: 180 INSNLVCKVSDFGLSRVLEDDPEAAYTTR-GGKIPIRWTSPEAIAYRKFTSASDVWSYGI 238
Query: 225 LLLELM 230
+L E+M
Sbjct: 239 VLWEVM 244
>pdb|3THB|A Chain A, Structure Of Plk1 Kinase Domain In Complex With A
Benzolactam-Derived Inhibitor
Length = 333
Score = 46.6 bits (109), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 48/196 (24%), Positives = 79/196 (40%), Gaps = 22/196 (11%)
Query: 75 HRNLIKVLTACLGVDYQGNDFKALVYEFMHNRSLKEWLYPISKEDETYKRPXXXXXXXXX 134
HR+L ++ NDF +V E RSL E +KR
Sbjct: 93 HRSLAHQHVVGFHGFFEDNDFVFVVLELCRRRSLLEL----------HKRRKALTEPEAR 142
Query: 135 XIAIDVASALNYLHHDCQPVTAHCVLKPSNVLLDDDMTARVGDFGLARFLPPTRTQTSSI 194
+ YLH + H LK N+ L++D+ ++GDFGLA T+ +
Sbjct: 143 YYLRQIVLGCQYLHRN---RVIHRDLKLGNLFLNEDLEVKIGDFGLA-----TKVEYDGE 194
Query: 195 DVK---GSIGYIAPEYGVGNEVSTIGDVYSYGILLLELMIREKPSDIMFEGDMNLH-KFA 250
K G+ YIAPE S DV+S G ++ L++ + P + + L K
Sbjct: 195 RKKVLCGTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKPPFETSCLKETYLRIKKN 254
Query: 251 KMALSNHVKDIVDSIL 266
+ ++ H+ + S++
Sbjct: 255 EYSIPKHINPVAASLI 270
>pdb|3VN9|A Chain A, Rifined Crystal Structure Of Non-Phosphorylated Map2k6 In
A Putative Auto-Inhibition State
Length = 340
Score = 46.6 bits (109), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 36/107 (33%), Positives = 58/107 (54%), Gaps = 11/107 (10%)
Query: 136 IAIDVASALNYLHHDCQPVTAHCVLKPSNVLLDDDMTARVGDFGLARFLPPTRTQTSSID 195
IA+ + AL +LH + H +KPSNVL++ ++ DFG++ +L + +T ID
Sbjct: 158 IAVSIVKALEHLHSKLSVI--HRDVKPSNVLINALGQVKMCDFGISGYLVDSVAKT--ID 213
Query: 196 VKGSIGYIAPEYGVGNEVSTIG-----DVYSYGILLLELMIREKPSD 237
G Y+APE + E++ G D++S GI ++EL I P D
Sbjct: 214 A-GCKPYMAPER-INPELNQKGYSVKSDIWSLGITMIELAILRFPYD 258
>pdb|3O23|A Chain A, Human Unphosphorylated Igf1-R Kinase Domain In Complex
With An Hydantoin Inhibitor
Length = 305
Score = 46.6 bits (109), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 40/174 (22%), Positives = 77/174 (44%), Gaps = 9/174 (5%)
Query: 63 FIAECKALRNIRHRNLIKVLTACLGVDYQGNDFKALVYEFMHNRSLKEWLYPISKEDETY 122
F+ E ++ +++++L GV QG ++ E M LK +L + E E
Sbjct: 66 FLNEASVMKEFNCHHVVRLL----GVVSQGQP-TLVIMELMTRGDLKSYLRSLRPEMENN 120
Query: 123 KRPXXXXXXXXXXIAIDVASALNYLHHDCQPVTAHCVLKPSNVLLDDDMTARVGDFGLAR 182
+A ++A + YL+ + H L N ++ +D T ++GDFG+ R
Sbjct: 121 PVLAPPSLSKMIQMAGEIADGMAYLNANK---FVHRDLAARNCMVAEDFTVKIGDFGMTR 177
Query: 183 FLPPTRTQTSSIDVKGSIGYIAPEYGVGNEVSTIGDVYSYGILLLEL-MIREKP 235
+ T + +++PE +T DV+S+G++L E+ + E+P
Sbjct: 178 DIYETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQP 231
>pdb|4A4X|A Chain A, Nek2-Ede Bound To Cct248662
Length = 279
Score = 46.6 bits (109), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 44/173 (25%), Positives = 72/173 (41%), Gaps = 21/173 (12%)
Query: 63 FIAECKALRNIRHRNLIKVLTACLGVDYQGNDFKALVYEFMHNRSLKEWLYPISKE---- 118
++E LR ++H N+++ + + N +V E+ L + +KE
Sbjct: 52 LVSEVNLLRELKHPNIVRYYDRIID---RTNTTLYIVMEYCEGGDLASVITKGTKERQYL 108
Query: 119 DETYKRPXXXXXXXXXXIAIDVASALNYLHH--DCQPVTAHCVLKPSNVLLDDDMTARVG 176
DE + + + AL H D H LKP+NV LD ++G
Sbjct: 109 DEEF----------VLRVMTQLTLALKECHRRSDGGHTVLHRDLKPANVFLDGKQNVKLG 158
Query: 177 DFGLARFLPPTRTQTSSIDVKGSIGYIAPEYGVGNEVSTIGDVYSYGILLLEL 229
DFGLAR L + + + G+ Y++PE + D++S G LL EL
Sbjct: 159 DFGLARIL--NHDEDFAKEFVGTPYYMSPEQMNRMSYNEKSDIWSLGCLLYEL 209
>pdb|3KB7|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 311
Score = 46.6 bits (109), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 48/196 (24%), Positives = 79/196 (40%), Gaps = 22/196 (11%)
Query: 75 HRNLIKVLTACLGVDYQGNDFKALVYEFMHNRSLKEWLYPISKEDETYKRPXXXXXXXXX 134
HR+L ++ NDF +V E RSL E +KR
Sbjct: 71 HRSLAHQHVVGFHGFFEDNDFVFVVLELCRRRSLLEL----------HKRRKALTEPEAR 120
Query: 135 XIAIDVASALNYLHHDCQPVTAHCVLKPSNVLLDDDMTARVGDFGLARFLPPTRTQTSSI 194
+ YLH + H LK N+ L++D+ ++GDFGLA T+ +
Sbjct: 121 YYLRQIVLGCQYLHRN---RVIHRDLKLGNLFLNEDLEVKIGDFGLA-----TKVEYDGE 172
Query: 195 DVK---GSIGYIAPEYGVGNEVSTIGDVYSYGILLLELMIREKPSDIMFEGDMNLH-KFA 250
K G+ YIAPE S DV+S G ++ L++ + P + + L K
Sbjct: 173 RKKTLCGTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKPPFETSCLKETYLRIKKN 232
Query: 251 KMALSNHVKDIVDSIL 266
+ ++ H+ + S++
Sbjct: 233 EYSIPKHINPVAASLI 248
>pdb|2YAC|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With
Nms-P937
pdb|4A4L|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
5-(2-Amino-Pyrimidin-4-Yl)-1h-Pyrrole Inhibitor
pdb|4A4O|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
2-
(2-Amino-Pyrimidin-4-Yl)-1,5,6,
7-Tetrahydro-Pyrrolopyridin- 4-One Inhibitor
Length = 311
Score = 46.6 bits (109), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 48/196 (24%), Positives = 79/196 (40%), Gaps = 22/196 (11%)
Query: 75 HRNLIKVLTACLGVDYQGNDFKALVYEFMHNRSLKEWLYPISKEDETYKRPXXXXXXXXX 134
HR+L ++ NDF +V E RSL E +KR
Sbjct: 71 HRSLAHQHVVGFHGFFEDNDFVFVVLELCRRRSLLEL----------HKRRKALTEPEAR 120
Query: 135 XIAIDVASALNYLHHDCQPVTAHCVLKPSNVLLDDDMTARVGDFGLARFLPPTRTQTSSI 194
+ YLH + H LK N+ L++D+ ++GDFGLA T+ +
Sbjct: 121 YYLRQIVLGCQYLHRN---RVIHRDLKLGNLFLNEDLEVKIGDFGLA-----TKVEYDGE 172
Query: 195 DVK---GSIGYIAPEYGVGNEVSTIGDVYSYGILLLELMIREKPSDIMFEGDMNLH-KFA 250
K G+ YIAPE S DV+S G ++ L++ + P + + L K
Sbjct: 173 RKKTLCGTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKPPFETSCLKETYLRIKKN 232
Query: 251 KMALSNHVKDIVDSIL 266
+ ++ H+ + S++
Sbjct: 233 EYSIPKHINPVAASLI 248
>pdb|3I81|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With Bms-754807
[1-(4-((5-Cyclopropyl-
1h-Pyrazol-3-Yl)amino)pyrrolo[2,1-F][1,2,
4]triazin-2-Yl)-N-
(6-Fluoro-3-Pyridinyl)-2-Methyl-L-Prolinamide]
Length = 315
Score = 46.6 bits (109), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 40/174 (22%), Positives = 77/174 (44%), Gaps = 9/174 (5%)
Query: 63 FIAECKALRNIRHRNLIKVLTACLGVDYQGNDFKALVYEFMHNRSLKEWLYPISKEDETY 122
F+ E ++ +++++L GV QG ++ E M LK +L + E E
Sbjct: 68 FLNEASVMKEFNCHHVVRLL----GVVSQGQP-TLVIMELMTRGDLKSYLRSLRPEMENN 122
Query: 123 KRPXXXXXXXXXXIAIDVASALNYLHHDCQPVTAHCVLKPSNVLLDDDMTARVGDFGLAR 182
+A ++A + YL+ + H L N ++ +D T ++GDFG+ R
Sbjct: 123 PVLAPPSLSKMIQMAGEIADGMAYLNANK---FVHRDLAARNCMVAEDFTVKIGDFGMTR 179
Query: 183 FLPPTRTQTSSIDVKGSIGYIAPEYGVGNEVSTIGDVYSYGILLLEL-MIREKP 235
+ T + +++PE +T DV+S+G++L E+ + E+P
Sbjct: 180 DIYETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQP 233
>pdb|2V5Q|A Chain A, Crystal Structure Of Wild-type Plk-1 Kinase Domain In
Complex With A Selective Darpin
pdb|2V5Q|B Chain B, Crystal Structure Of Wild-type Plk-1 Kinase Domain In
Complex With A Selective Darpin
Length = 315
Score = 46.6 bits (109), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 48/196 (24%), Positives = 79/196 (40%), Gaps = 22/196 (11%)
Query: 75 HRNLIKVLTACLGVDYQGNDFKALVYEFMHNRSLKEWLYPISKEDETYKRPXXXXXXXXX 134
HR+L ++ NDF +V E RSL E +KR
Sbjct: 75 HRSLAHQHVVGFHGFFEDNDFVFVVLELCRRRSLLEL----------HKRRKALTEPEAR 124
Query: 135 XIAIDVASALNYLHHDCQPVTAHCVLKPSNVLLDDDMTARVGDFGLARFLPPTRTQTSSI 194
+ YLH + H LK N+ L++D+ ++GDFGLA T+ +
Sbjct: 125 YYLRQIVLGCQYLHRN---RVIHRDLKLGNLFLNEDLEVKIGDFGLA-----TKVEYDGE 176
Query: 195 DVK---GSIGYIAPEYGVGNEVSTIGDVYSYGILLLELMIREKPSDIMFEGDMNLH-KFA 250
K G+ YIAPE S DV+S G ++ L++ + P + + L K
Sbjct: 177 RKKTLCGTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKPPFETSCLKETYLRIKKN 236
Query: 251 KMALSNHVKDIVDSIL 266
+ ++ H+ + S++
Sbjct: 237 EYSIPKHINPVAASLI 252
>pdb|2RKU|A Chain A, Structure Of Plk1 In Complex With Bi2536
Length = 294
Score = 46.6 bits (109), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 48/196 (24%), Positives = 79/196 (40%), Gaps = 22/196 (11%)
Query: 75 HRNLIKVLTACLGVDYQGNDFKALVYEFMHNRSLKEWLYPISKEDETYKRPXXXXXXXXX 134
HR+L ++ NDF +V E RSL E +KR
Sbjct: 69 HRSLAHQHVVGFHGFFEDNDFVFVVLELCRRRSLLEL----------HKRRKALTEPEAR 118
Query: 135 XIAIDVASALNYLHHDCQPVTAHCVLKPSNVLLDDDMTARVGDFGLARFLPPTRTQTSSI 194
+ YLH + H LK N+ L++D+ ++GDFGLA T+ +
Sbjct: 119 YYLRQIVLGCQYLHRN---RVIHRDLKLGNLFLNEDLEVKIGDFGLA-----TKVEYDGE 170
Query: 195 DVK---GSIGYIAPEYGVGNEVSTIGDVYSYGILLLELMIREKPSDIMFEGDMNLH-KFA 250
K G+ YIAPE S DV+S G ++ L++ + P + + L K
Sbjct: 171 RKKVLCGTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKPPFETSCLKETYLRIKKN 230
Query: 251 KMALSNHVKDIVDSIL 266
+ ++ H+ + S++
Sbjct: 231 EYSIPKHINPVAASLI 246
>pdb|2OU7|A Chain A, Structure Of The Catalytic Domain Of Human Polo-Like
Kinase 1
pdb|2OWB|A Chain A, Structure Of The Catalytic Domain Of Human Polo-Like
Kinase 1
pdb|3FC2|A Chain A, Plk1 In Complex With Bi6727
Length = 335
Score = 46.6 bits (109), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 48/196 (24%), Positives = 79/196 (40%), Gaps = 22/196 (11%)
Query: 75 HRNLIKVLTACLGVDYQGNDFKALVYEFMHNRSLKEWLYPISKEDETYKRPXXXXXXXXX 134
HR+L ++ NDF +V E RSL E +KR
Sbjct: 95 HRSLAHQHVVGFHGFFEDNDFVFVVLELCRRRSLLEL----------HKRRKALTEPEAR 144
Query: 135 XIAIDVASALNYLHHDCQPVTAHCVLKPSNVLLDDDMTARVGDFGLARFLPPTRTQTSSI 194
+ YLH + H LK N+ L++D+ ++GDFGLA T+ +
Sbjct: 145 YYLRQIVLGCQYLHRN---RVIHRDLKLGNLFLNEDLEVKIGDFGLA-----TKVEYDGE 196
Query: 195 DVK---GSIGYIAPEYGVGNEVSTIGDVYSYGILLLELMIREKPSDIMFEGDMNLH-KFA 250
K G+ YIAPE S DV+S G ++ L++ + P + + L K
Sbjct: 197 RKKVLCGTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKPPFETSCLKETYLRIKKN 256
Query: 251 KMALSNHVKDIVDSIL 266
+ ++ H+ + S++
Sbjct: 257 EYSIPKHINPVAASLI 272
>pdb|2OJ9|A Chain A, Structure Of Igf-1r Kinase Domain Complexed With A
Benzimidazole Inhibitor
pdb|3NW5|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (11b)
pdb|3NW6|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (11a)
pdb|3NW7|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (34)
Length = 307
Score = 46.6 bits (109), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 40/174 (22%), Positives = 77/174 (44%), Gaps = 9/174 (5%)
Query: 63 FIAECKALRNIRHRNLIKVLTACLGVDYQGNDFKALVYEFMHNRSLKEWLYPISKEDETY 122
F+ E ++ +++++L GV QG ++ E M LK +L + E E
Sbjct: 68 FLNEASVMKEFNCHHVVRLL----GVVSQGQP-TLVIMELMTRGDLKSYLRSLRPEMENN 122
Query: 123 KRPXXXXXXXXXXIAIDVASALNYLHHDCQPVTAHCVLKPSNVLLDDDMTARVGDFGLAR 182
+A ++A + YL+ + H L N ++ +D T ++GDFG+ R
Sbjct: 123 PVLAPPSLSKMIQMAGEIADGMAYLNANK---FVHRDLAARNCMVAEDFTVKIGDFGMTR 179
Query: 183 FLPPTRTQTSSIDVKGSIGYIAPEYGVGNEVSTIGDVYSYGILLLEL-MIREKP 235
+ T + +++PE +T DV+S+G++L E+ + E+P
Sbjct: 180 DIYETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQP 233
>pdb|1JQH|A Chain A, Igf-1 Receptor Kinase Domain
pdb|1JQH|B Chain B, Igf-1 Receptor Kinase Domain
pdb|1JQH|C Chain C, Igf-1 Receptor Kinase Domain
Length = 308
Score = 46.6 bits (109), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 40/174 (22%), Positives = 77/174 (44%), Gaps = 9/174 (5%)
Query: 63 FIAECKALRNIRHRNLIKVLTACLGVDYQGNDFKALVYEFMHNRSLKEWLYPISKEDETY 122
F+ E ++ +++++L GV QG ++ E M LK +L + E E
Sbjct: 69 FLNEASVMKEFNCHHVVRLL----GVVSQGQP-TLVIMELMTRGDLKSYLRSLRPEMENN 123
Query: 123 KRPXXXXXXXXXXIAIDVASALNYLHHDCQPVTAHCVLKPSNVLLDDDMTARVGDFGLAR 182
+A ++A + YL+ + H L N ++ +D T ++GDFG+ R
Sbjct: 124 PVLAPPSLSKMIQMAGEIADGMAYLNANK---FVHRDLAARNCMVAEDFTVKIGDFGMTR 180
Query: 183 FLPPTRTQTSSIDVKGSIGYIAPEYGVGNEVSTIGDVYSYGILLLEL-MIREKP 235
+ T + +++PE +T DV+S+G++L E+ + E+P
Sbjct: 181 DIYETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQP 234
>pdb|3C4F|A Chain A, Fgfr Tyrosine Kinase Domain In Complex With 3-(3-
Methoxybenzyl)-7-Azaindole
pdb|3C4F|B Chain B, Fgfr Tyrosine Kinase Domain In Complex With 3-(3-
Methoxybenzyl)-7-Azaindole
Length = 302
Score = 46.2 bits (108), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 44/181 (24%), Positives = 79/181 (43%), Gaps = 21/181 (11%)
Query: 60 FKSFIAECKALRNI-RHRNLIKVLTACLGVDYQGNDFKALVYEFMHNRSLKEWLY---PI 115
I+E + ++ I +H+N+I +L AC Q +V E+ +L+E+L P
Sbjct: 62 LSDLISEMEMMKMIGKHKNIINLLGACT----QDGPLYVIV-EYASKGNLREYLQARRPP 116
Query: 116 SKE---DETYKRPXXXXXXXXXXIAIDVASALNYLHHDCQPVTAHCV---LKPSNVLLDD 169
E + ++ A VA + YL + C+ L NVL+ +
Sbjct: 117 GLEYCYNPSHNPEEQLSSKDLVSCAYQVARGMEYL------ASKKCIHRDLAARNVLVTE 170
Query: 170 DMTARVGDFGLARFLPPTRTQTSSIDVKGSIGYIAPEYGVGNEVSTIGDVYSYGILLLEL 229
D ++ DFGLAR + + + + + ++APE + DV+S+G+LL E+
Sbjct: 171 DNVMKIADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEI 230
Query: 230 M 230
Sbjct: 231 F 231
>pdb|3KXX|A Chain A, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|B Chain B, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|C Chain C, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|D Chain D, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
Length = 317
Score = 46.2 bits (108), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 44/178 (24%), Positives = 79/178 (44%), Gaps = 21/178 (11%)
Query: 63 FIAECKALRNI-RHRNLIKVLTACLGVDYQGNDFKALVYEFMHNRSLKEWLY---PISKE 118
I+E + ++ I +H+N+I +L AC Q +V E+ +L+E+L P E
Sbjct: 80 LISEMEMMKMIGKHKNIINLLGACT----QDGPLYVIV-EYASKGNLREYLQAREPPGLE 134
Query: 119 ---DETYKRPXXXXXXXXXXIAIDVASALNYLHHDCQPVTAHCV---LKPSNVLLDDDMT 172
+ ++ A VA + YL + C+ L NVL+ +D
Sbjct: 135 YSYNPSHNPEEQLSSKDLVSCAYQVARGMEYL------ASKKCIHRDLAARNVLVTEDNV 188
Query: 173 ARVGDFGLARFLPPTRTQTSSIDVKGSIGYIAPEYGVGNEVSTIGDVYSYGILLLELM 230
++ DFGLAR + + + + + ++APE + DV+S+G+LL E+
Sbjct: 189 MKIADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIF 246
>pdb|3JS2|A Chain A, Crystal Structure Of Minimal Kinase Domain Of Fibroblast
Growth Factor Receptor 1 In Complex With 5-(2-Thienyl)
Nicotinic Acid
pdb|3JS2|B Chain B, Crystal Structure Of Minimal Kinase Domain Of Fibroblast
Growth Factor Receptor 1 In Complex With 5-(2-Thienyl)
Nicotinic Acid
pdb|3KY2|A Chain A, Crystal Structure Of Fibroblast Growth Factor Receptor 1
Kinase Domain
pdb|3KY2|B Chain B, Crystal Structure Of Fibroblast Growth Factor Receptor 1
Kinase Domain
Length = 317
Score = 46.2 bits (108), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 44/178 (24%), Positives = 79/178 (44%), Gaps = 21/178 (11%)
Query: 63 FIAECKALRNI-RHRNLIKVLTACLGVDYQGNDFKALVYEFMHNRSLKEWLY---PISKE 118
I+E + ++ I +H+N+I +L AC Q +V E+ +L+E+L P E
Sbjct: 80 LISEMEMMKMIGKHKNIINLLGACT----QDGPLYVIV-EYASKGNLREYLQARRPPGLE 134
Query: 119 ---DETYKRPXXXXXXXXXXIAIDVASALNYLHHDCQPVTAHCV---LKPSNVLLDDDMT 172
+ ++ A VA + YL + C+ L NVL+ +D
Sbjct: 135 YSYNPSHNPEEQLSSKDLVSCAYQVARGMEYL------ASKKCIHRDLAARNVLVTEDNV 188
Query: 173 ARVGDFGLARFLPPTRTQTSSIDVKGSIGYIAPEYGVGNEVSTIGDVYSYGILLLELM 230
++ DFGLAR + + + + + ++APE + DV+S+G+LL E+
Sbjct: 189 MKIADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIF 246
>pdb|3RHX|B Chain B, Crystal Structure Of The Catalytic Domain Of Fgfr1 Kinase
In Complex With Arq 069
pdb|3RHX|A Chain A, Crystal Structure Of The Catalytic Domain Of Fgfr1 Kinase
In Complex With Arq 069
Length = 306
Score = 46.2 bits (108), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 44/178 (24%), Positives = 79/178 (44%), Gaps = 21/178 (11%)
Query: 63 FIAECKALRNI-RHRNLIKVLTACLGVDYQGNDFKALVYEFMHNRSLKEWLY---PISKE 118
I+E + ++ I +H+N+I +L AC Q +V E+ +L+E+L P E
Sbjct: 69 LISEMEMMKMIGKHKNIINLLGACT----QDGPLYVIV-EYASKGNLREYLQARRPPGLE 123
Query: 119 ---DETYKRPXXXXXXXXXXIAIDVASALNYLHHDCQPVTAHCV---LKPSNVLLDDDMT 172
+ ++ A VA + YL + C+ L NVL+ +D
Sbjct: 124 YSYNPSHNPEEQLSSKDLVSCAYQVARGMEYL------ASKKCIHRDLAARNVLVTEDNV 177
Query: 173 ARVGDFGLARFLPPTRTQTSSIDVKGSIGYIAPEYGVGNEVSTIGDVYSYGILLLELM 230
++ DFGLAR + + + + + ++APE + DV+S+G+LL E+
Sbjct: 178 MKIADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIF 235
>pdb|3LVP|A Chain A, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|B Chain B, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|C Chain C, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|D Chain D, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
Length = 336
Score = 46.2 bits (108), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 40/174 (22%), Positives = 77/174 (44%), Gaps = 9/174 (5%)
Query: 63 FIAECKALRNIRHRNLIKVLTACLGVDYQGNDFKALVYEFMHNRSLKEWLYPISKEDETY 122
F+ E ++ +++++L GV QG ++ E M LK +L + E E
Sbjct: 97 FLNEASVMKEFNCHHVVRLL----GVVSQGQP-TLVIMELMTRGDLKSYLRSLRPEMENN 151
Query: 123 KRPXXXXXXXXXXIAIDVASALNYLHHDCQPVTAHCVLKPSNVLLDDDMTARVGDFGLAR 182
+A ++A + YL+ + H L N ++ +D T ++GDFG+ R
Sbjct: 152 PVLAPPSLSKMIQMAGEIADGMAYLNANK---FVHRDLAARNCMVAEDFTVKIGDFGMTR 208
Query: 183 FLPPTRTQTSSIDVKGSIGYIAPEYGVGNEVSTIGDVYSYGILLLEL-MIREKP 235
+ T + +++PE +T DV+S+G++L E+ + E+P
Sbjct: 209 DIYETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQP 262
>pdb|4F63|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 1
pdb|4F63|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 1
pdb|4F64|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 6
pdb|4F64|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 6
pdb|4F65|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 8
pdb|4F65|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 8
Length = 309
Score = 46.2 bits (108), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 44/178 (24%), Positives = 79/178 (44%), Gaps = 21/178 (11%)
Query: 63 FIAECKALRNI-RHRNLIKVLTACLGVDYQGNDFKALVYEFMHNRSLKEWLY---PISKE 118
I+E + ++ I +H+N+I +L AC Q +V E+ +L+E+L P E
Sbjct: 72 LISEMEMMKMIGKHKNIINLLGACT----QDGPLYVIV-EYASKGNLREYLQARRPPGLE 126
Query: 119 ---DETYKRPXXXXXXXXXXIAIDVASALNYLHHDCQPVTAHCV---LKPSNVLLDDDMT 172
+ ++ A VA + YL + C+ L NVL+ +D
Sbjct: 127 YSYNPSHNPEEQLSSKDLVSCAYQVARGMEYL------ASKKCIHRDLAARNVLVTEDNV 180
Query: 173 ARVGDFGLARFLPPTRTQTSSIDVKGSIGYIAPEYGVGNEVSTIGDVYSYGILLLELM 230
++ DFGLAR + + + + + ++APE + DV+S+G+LL E+
Sbjct: 181 MKIADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIF 238
>pdb|1FGK|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1
pdb|1FGK|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1
pdb|1FGI|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su5402 Inhibitor
pdb|1FGI|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su5402 Inhibitor
pdb|1AGW|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su4984 Inhibitor
pdb|1AGW|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su4984 Inhibitor
pdb|2FGI|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of Fgf
Receptor 1 In Complex With Inhibitor Pd173074
pdb|2FGI|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of Fgf
Receptor 1 In Complex With Inhibitor Pd173074
Length = 310
Score = 46.2 bits (108), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 44/178 (24%), Positives = 79/178 (44%), Gaps = 21/178 (11%)
Query: 63 FIAECKALRNI-RHRNLIKVLTACLGVDYQGNDFKALVYEFMHNRSLKEWLY---PISKE 118
I+E + ++ I +H+N+I +L AC Q +V E+ +L+E+L P E
Sbjct: 73 LISEMEMMKMIGKHKNIINLLGACT----QDGPLYVIV-EYASKGNLREYLQARRPPGLE 127
Query: 119 ---DETYKRPXXXXXXXXXXIAIDVASALNYLHHDCQPVTAHCV---LKPSNVLLDDDMT 172
+ ++ A VA + YL + C+ L NVL+ +D
Sbjct: 128 YSYNPSHNPEEQLSSKDLVSCAYQVARGMEYL------ASKKCIHRDLAARNVLVTEDNV 181
Query: 173 ARVGDFGLARFLPPTRTQTSSIDVKGSIGYIAPEYGVGNEVSTIGDVYSYGILLLELM 230
++ DFGLAR + + + + + ++APE + DV+S+G+LL E+
Sbjct: 182 MKIADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIF 239
>pdb|4AW2|A Chain A, Crystal Structure Of Cdc42 Binding Protein Kinase Alpha
(Mrck Alpha)
Length = 437
Score = 46.2 bits (108), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 34/105 (32%), Positives = 49/105 (46%), Gaps = 15/105 (14%)
Query: 136 IAIDVASALNYLHHDCQPVTAHCVLKPSNVLLDDDMTARVGDFGLARFLPPTRTQTSSID 195
IAID L+Y+H D +KP N+L+D + R+ DFG L T SS+
Sbjct: 186 IAIDSVHQLHYVHRD---------IKPDNILMDMNGHIRLADFGSCLKLMEDGTVQSSVA 236
Query: 196 VKGSIGYIAPEY-----GVGNEVSTIGDVYSYGILLLELMIREKP 235
V G+ YI+PE G D +S G+ + E++ E P
Sbjct: 237 V-GTPDYISPEILQAMEGGKGRYGPECDWWSLGVCMYEMLYGETP 280
>pdb|3GQL|A Chain A, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
pdb|3GQL|B Chain B, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
pdb|3GQL|C Chain C, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
Length = 326
Score = 46.2 bits (108), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 44/180 (24%), Positives = 79/180 (43%), Gaps = 21/180 (11%)
Query: 60 FKSFIAECKALRNI-RHRNLIKVLTACLGVDYQGNDFKALVYEFMHNRSLKEWLY---PI 115
I+E + ++ I +H+N+I +L AC Q +V E+ +L+E+L P
Sbjct: 77 LSDLISEMEMMKMIGKHKNIINLLGACT----QDGPLYVIV-EYASKGNLREYLQARRPP 131
Query: 116 SKE---DETYKRPXXXXXXXXXXIAIDVASALNYLHHDCQPVTAHCV---LKPSNVLLDD 169
E + ++ A VA + YL + C+ L NVL+ +
Sbjct: 132 GLEYCYNPSHNPEEQLSSKDLVSCAYQVARGMEYL------ASKKCIHRDLAARNVLVTE 185
Query: 170 DMTARVGDFGLARFLPPTRTQTSSIDVKGSIGYIAPEYGVGNEVSTIGDVYSYGILLLEL 229
D ++ DFGLAR + + + + + ++APE + DV+S+G+LL E+
Sbjct: 186 DNVMKIADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEI 245
>pdb|1M7N|A Chain A, Crystal Structure Of Unactivated Apo Insulin-Like Growth
Factor-1 Receptor Kinase Domain
pdb|1M7N|B Chain B, Crystal Structure Of Unactivated Apo Insulin-Like Growth
Factor-1 Receptor Kinase Domain
Length = 322
Score = 46.2 bits (108), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 40/174 (22%), Positives = 77/174 (44%), Gaps = 9/174 (5%)
Query: 63 FIAECKALRNIRHRNLIKVLTACLGVDYQGNDFKALVYEFMHNRSLKEWLYPISKEDETY 122
F+ E ++ +++++L GV QG ++ E M LK +L + E E
Sbjct: 75 FLNEASVMKEFNCHHVVRLL----GVVSQGQP-TLVIMELMTRGDLKSYLRSLRPEMENN 129
Query: 123 KRPXXXXXXXXXXIAIDVASALNYLHHDCQPVTAHCVLKPSNVLLDDDMTARVGDFGLAR 182
+A ++A + YL+ + H L N ++ +D T ++GDFG+ R
Sbjct: 130 PVLAPPSLSKMIQMAGEIADGMAYLNANK---FVHRDLAARNCMVAEDFTVKIGDFGMTR 186
Query: 183 FLPPTRTQTSSIDVKGSIGYIAPEYGVGNEVSTIGDVYSYGILLLEL-MIREKP 235
+ T + +++PE +T DV+S+G++L E+ + E+P
Sbjct: 187 DIYETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQP 240
>pdb|3QBN|A Chain A, Structure Of Human Aurora A In Complex With A
Diaminopyrimidine
Length = 281
Score = 46.2 bits (108), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 31/115 (26%), Positives = 55/115 (47%), Gaps = 11/115 (9%)
Query: 139 DVASALNYLHHDCQPVTAHCVLKPSNVLLDDDMTARVGDFGLARFLPPTRTQTSSIDVKG 198
++A+AL+Y H H +KP N+LL ++ DFG + P +R T S G
Sbjct: 117 ELANALSYCHSK---RVIHRDIKPENLLLGSAGELKIADFGWSCHAPSSRRTTLS----G 169
Query: 199 SIGYIAPEYGVGNEVSTIGDVYSYGILLLELMIREKPSDIMFEGDMNLHKFAKMA 253
++ Y+ PE G D++S G+L E ++ + P FE + + +++
Sbjct: 170 TLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPP----FEANTYQETYKRIS 220
>pdb|3H4J|B Chain B, Crystal Structure Of Pombe Ampk Kdaid Fragment
pdb|3H4J|A Chain A, Crystal Structure Of Pombe Ampk Kdaid Fragment
Length = 336
Score = 46.2 bits (108), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 35/106 (33%), Positives = 50/106 (47%), Gaps = 15/106 (14%)
Query: 140 VASALNYLHHDCQPVTAHCVLKPSNVLLDDDMTARVGDFGLARFLPPTRTQTSSIDVKGS 199
+ A+ Y H H LKP N+LLDD++ ++ DFGL+ + +S GS
Sbjct: 117 IICAIEYCHRHK---IVHRDLKPENLLLDDNLNVKIADFGLSNIMTDGNFLKTSC---GS 170
Query: 200 IGYIAPE-----YGVGNEVSTIGDVYSYGILLLELMIREKPSDIMF 240
Y APE G EV DV+S GI+L +++ P D F
Sbjct: 171 PNYAAPEVINGKLYAGPEV----DVWSCGIVLYVMLVGRLPFDDEF 212
>pdb|3DAE|A Chain A, Crystal Structure Of Phosphorylated Snf1 Kinase Domain
pdb|3DAE|B Chain B, Crystal Structure Of Phosphorylated Snf1 Kinase Domain
Length = 283
Score = 46.2 bits (108), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 34/103 (33%), Positives = 50/103 (48%), Gaps = 15/103 (14%)
Query: 140 VASALNYLHHDCQPVTAHCVLKPSNVLLDDDMTARVGDFGLARFLPPTRTQTSSIDVKGS 199
+ SA+ Y H + H LKP N+LLD+ + ++ DFGL+ + +S GS
Sbjct: 122 IISAVEYCH---RHKIVHRDLKPENLLLDEHLNVKIADFGLSNIMTDGNFLKTSC---GS 175
Query: 200 IGYIAPE-----YGVGNEVSTIGDVYSYGILLLELMIREKPSD 237
Y APE G EV DV+S G++L ++ R P D
Sbjct: 176 PNYAAPEVISGKLYAGPEV----DVWSCGVILYVMLCRRLPFD 214
>pdb|1BI8|A Chain A, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structures Cdk6-P19ink4d Inhibitor Complex
pdb|1BI8|C Chain C, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structures Cdk6-P19ink4d Inhibitor Complex
pdb|1BI7|A Chain A, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structure Of The Cdk6-P16ink4a Tumor Suppressor
Complex
pdb|1BLX|A Chain A, P19ink4dCDK6 COMPLEX
pdb|1G3N|A Chain A, Structure Of A P18(Ink4c)-Cdk6-K-Cyclin Ternary Complex
pdb|1G3N|E Chain E, Structure Of A P18(Ink4c)-Cdk6-K-Cyclin Ternary Complex
Length = 326
Score = 46.2 bits (108), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 46/192 (23%), Positives = 81/192 (42%), Gaps = 25/192 (13%)
Query: 64 IAECKALRNIRHRNLIKVLTACLGVDYQGNDFKALVYEFMHNRSLKEWLYPISKE---DE 120
+A + L H N++++ C LV+E + ++ L +L + + E
Sbjct: 62 VAVLRHLETFEHPNVVRLFDVCTVSRTDRETKLTLVFEHV-DQDLTTYLDKVPEPGVPTE 120
Query: 121 TYKRPXXXXXXXXXXIAIDVASALNYLHHDCQPVTAHCVLKPSNVLLDDDMTARVGDFGL 180
T K + + L++LH H LKP N+L+ ++ DFGL
Sbjct: 121 TIK-----------DMMFQLLRGLDFLHSH---RVVHRDLKPQNILVTSSGQIKLADFGL 166
Query: 181 ARFLPPTRTQTSSIDVKGSIGYIAPEYGVGNEVSTIGDVYSYGILLLELMIREKPSDIMF 240
AR Q + V ++ Y APE + + +T D++S G + E M R KP +F
Sbjct: 167 ARIY---SFQMALTSVVVTLWYRAPEVLLQSSYATPVDLWSVGCIFAE-MFRRKP---LF 219
Query: 241 EGDMNLHKFAKM 252
G ++ + K+
Sbjct: 220 RGSSDVDQLGKI 231
>pdb|3FDN|A Chain A, Structure-Based Drug Design Of Novel Aurora Kinase A
Inhibitors: Structure Basis For Potency And Specificity
pdb|3K5U|A Chain A, Identification, Sar Studies And X-Ray Cocrystal Analysis
Of A Novel Furano-Pyrimidine Aurora Kinase A Inhibitor
pdb|3M11|A Chain A, Crystal Structure Of Aurora A Kinase Complexed With
Inhibitor
Length = 279
Score = 46.2 bits (108), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 30/115 (26%), Positives = 55/115 (47%), Gaps = 11/115 (9%)
Query: 139 DVASALNYLHHDCQPVTAHCVLKPSNVLLDDDMTARVGDFGLARFLPPTRTQTSSIDVKG 198
++A+AL+Y H H +KP N+LL ++ DFG + P +R D+ G
Sbjct: 117 ELANALSYCHSK---RVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSR----RTDLCG 169
Query: 199 SIGYIAPEYGVGNEVSTIGDVYSYGILLLELMIREKPSDIMFEGDMNLHKFAKMA 253
++ Y+ PE G D++S G+L E ++ + P FE + + +++
Sbjct: 170 TLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPP----FEANTYQETYKRIS 220
>pdb|4AAA|A Chain A, Crystal Structure Of The Human Cdkl2 Kinase Domain
pdb|4BBM|A Chain A, Crystal Structure Of The Human Cdkl2 Kinase Domain With
Bound Tcs 2312
pdb|4BBM|B Chain B, Crystal Structure Of The Human Cdkl2 Kinase Domain With
Bound Tcs 2312
Length = 331
Score = 46.2 bits (108), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 49/196 (25%), Positives = 83/196 (42%), Gaps = 31/196 (15%)
Query: 66 ECKALRNIRHRNLIKVLTACLGVDYQGNDFKALVYEFMHNRSLKEW-LYPISKEDETYKR 124
E K L+ +RH NL+ +L C + LV+EF+ + L + L+P + + ++
Sbjct: 74 EIKLLKQLRHENLVNLLEVC-----KKKKRWYLVFEFVDHTILDDLELFPNGLDYQVVQK 128
Query: 125 PXXXXXXXXXXIAIDVASALNYLHHDCQPVTAHCVLKPSNVLLDDDMTARVGDFGLARFL 184
I + N +H D +KP N+L+ ++ DFG AR L
Sbjct: 129 YLFQIIN-----GIGFCHSHNIIHRD---------IKPENILVSQSGVVKLCDFGFARTL 174
Query: 185 -PPTRTQTSSIDVKGSIGYIAPEYGVGN-EVSTIGDVYSYGILLLELMIREKPSDIMFEG 242
P + + Y APE VG+ + DV++ G L+ E+ + E +F G
Sbjct: 175 AAPGEVYDDEVATR---WYRAPELLVGDVKYGKAVDVWAIGCLVTEMFMGEP----LFPG 227
Query: 243 DMNLHKFAK--MALSN 256
D ++ + M L N
Sbjct: 228 DSDIDQLYHIMMCLGN 243
>pdb|2DWB|A Chain A, Aurora-A Kinase Complexed With Amppnp
Length = 285
Score = 46.2 bits (108), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 30/115 (26%), Positives = 55/115 (47%), Gaps = 11/115 (9%)
Query: 139 DVASALNYLHHDCQPVTAHCVLKPSNVLLDDDMTARVGDFGLARFLPPTRTQTSSIDVKG 198
++A+AL+Y H H +KP N+LL ++ DFG + P +R T + G
Sbjct: 121 ELANALSYCHSK---RVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTT----LCG 173
Query: 199 SIGYIAPEYGVGNEVSTIGDVYSYGILLLELMIREKPSDIMFEGDMNLHKFAKMA 253
++ Y+ PE G D++S G+L E ++ + P FE + + +++
Sbjct: 174 TLDYLPPEXIEGRXHDEKVDLWSLGVLCYEFLVGKPP----FEANTYQETYKRIS 224
>pdb|3HYH|A Chain A, Crystal Structure Of The Protein Kinase Domain Of Yeast
Amp-Activated Protein Kinase Snf1
pdb|3HYH|B Chain B, Crystal Structure Of The Protein Kinase Domain Of Yeast
Amp-Activated Protein Kinase Snf1
Length = 275
Score = 46.2 bits (108), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 34/103 (33%), Positives = 50/103 (48%), Gaps = 15/103 (14%)
Query: 140 VASALNYLHHDCQPVTAHCVLKPSNVLLDDDMTARVGDFGLARFLPPTRTQTSSIDVKGS 199
+ SA+ Y H + H LKP N+LLD+ + ++ DFGL+ + +S GS
Sbjct: 121 IISAVEYCH---RHKIVHRDLKPENLLLDEHLNVKIADFGLSNIMTDGNFLKTSC---GS 174
Query: 200 IGYIAPE-----YGVGNEVSTIGDVYSYGILLLELMIREKPSD 237
Y APE G EV DV+S G++L ++ R P D
Sbjct: 175 PNYAAPEVISGKLYAGPEV----DVWSCGVILYVMLCRRLPFD 213
>pdb|2C6E|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With A
5-Aminopyrimidinyl Quinazoline Inhibitor
pdb|2C6E|B Chain B, Aurora A Kinase Activated Mutant (T287d) In Complex With A
5-Aminopyrimidinyl Quinazoline Inhibitor
Length = 283
Score = 46.2 bits (108), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 28/97 (28%), Positives = 48/97 (49%), Gaps = 7/97 (7%)
Query: 139 DVASALNYLHHDCQPVTAHCVLKPSNVLLDDDMTARVGDFGLARFLPPTRTQTSSIDVKG 198
++A+AL+Y H H +KP N+LL ++ DFG + P +R D+ G
Sbjct: 121 ELANALSYCH---SKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSR----RTDLCG 173
Query: 199 SIGYIAPEYGVGNEVSTIGDVYSYGILLLELMIREKP 235
++ Y+ PE G D++S G+L E ++ + P
Sbjct: 174 TLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPP 210
>pdb|3MN3|A Chain A, An Inhibited Conformation For The Protein Kinase Domain Of
The Saccharomyces Cerevisiae Ampk Homolog Snf1
Length = 271
Score = 46.2 bits (108), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 34/103 (33%), Positives = 50/103 (48%), Gaps = 15/103 (14%)
Query: 140 VASALNYLHHDCQPVTAHCVLKPSNVLLDDDMTARVGDFGLARFLPPTRTQTSSIDVKGS 199
+ SA+ Y H + H LKP N+LLD+ + ++ DFGL+ + +S GS
Sbjct: 112 IISAVEYCH---RHKIVHRDLKPENLLLDEHLNVKIADFGLSNIMTDGNFLKTSC---GS 165
Query: 200 IGYIAPE-----YGVGNEVSTIGDVYSYGILLLELMIREKPSD 237
Y APE G EV DV+S G++L ++ R P D
Sbjct: 166 PNYAAPEVISGKLYAGPEV----DVWSCGVILYVMLCRRLPFD 204
>pdb|2C6D|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With
Adpnp
Length = 275
Score = 45.8 bits (107), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 30/115 (26%), Positives = 55/115 (47%), Gaps = 11/115 (9%)
Query: 139 DVASALNYLHHDCQPVTAHCVLKPSNVLLDDDMTARVGDFGLARFLPPTRTQTSSIDVKG 198
++A+AL+Y H H +KP N+LL ++ DFG + P +R D+ G
Sbjct: 116 ELANALSYCHSK---RVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSR----RTDLCG 168
Query: 199 SIGYIAPEYGVGNEVSTIGDVYSYGILLLELMIREKPSDIMFEGDMNLHKFAKMA 253
++ Y+ PE G D++S G+L E ++ + P FE + + +++
Sbjct: 169 TLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPP----FEANTYQETYKRIS 219
>pdb|3LXN|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
pdb|3LXP|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
Length = 318
Score = 45.8 bits (107), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 45/166 (27%), Positives = 68/166 (40%), Gaps = 18/166 (10%)
Query: 66 ECKALRNIRHRNLIKVLTACLGVDYQGNDFKALVYEFMHNRSLKEWLYPISKEDETYKRP 125
E LR + H ++IK C + G LV E++ SL+++L S
Sbjct: 83 EIDILRTLYHEHIIKYKGCC---EDAGAASLQLVMEYVPLGSLRDYLPRHS--------- 130
Query: 126 XXXXXXXXXXIAIDVASALNYLHHDCQPVTAHCVLKPSNVLLDDDMTARVGDFGLARFLP 185
A + + YLH H L NVLLD+D ++GDFGLA+ +P
Sbjct: 131 --IGLAQLLLFAQQICEGMAYLHAQ---HYIHRDLAARNVLLDNDRLVKIGDFGLAKAVP 185
Query: 186 PTRTQTS-SIDVKGSIGYIAPEYGVGNEVSTIGDVYSYGILLLELM 230
D + + APE + DV+S+G+ L EL+
Sbjct: 186 EGHEXYRVREDGDSPVFWYAPECLKEYKFYYASDVWSFGVTLYELL 231
>pdb|3TT0|A Chain A, Co-Structure Of Fibroblast Growth Factor Receptor 1 Kinase
Domain With
3-(2,6-Dichloro-3,
5-Dimethoxy-Phenyl)-1-{6-[4-(4-Ethyl-Piperazin-1-
Yl)-Phenylamino]-Pyrimidin-4-Yl}-1-Methyl-Urea (Bgj398)
pdb|3TT0|B Chain B, Co-Structure Of Fibroblast Growth Factor Receptor 1 Kinase
Domain With
3-(2,6-Dichloro-3,
5-Dimethoxy-Phenyl)-1-{6-[4-(4-Ethyl-Piperazin-1-
Yl)-Phenylamino]-Pyrimidin-4-Yl}-1-Methyl-Urea (Bgj398)
Length = 382
Score = 45.8 bits (107), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 44/178 (24%), Positives = 79/178 (44%), Gaps = 21/178 (11%)
Query: 63 FIAECKALRNI-RHRNLIKVLTACLGVDYQGNDFKALVYEFMHNRSLKEWLY---PISKE 118
I+E + ++ I +H+N+I +L AC Q +V E+ +L+E+L P E
Sbjct: 121 LISEMEMMKMIGKHKNIINLLGACT----QDGPLYVIV-EYASKGNLREYLQARRPPGLE 175
Query: 119 ---DETYKRPXXXXXXXXXXIAIDVASALNYLHHDCQPVTAHCV---LKPSNVLLDDDMT 172
+ ++ A VA + YL + C+ L NVL+ +D
Sbjct: 176 YSYNPSHNPEEQLSSKDLVSCAYQVARGMEYL------ASKKCIHRDLAARNVLVTEDNV 229
Query: 173 ARVGDFGLARFLPPTRTQTSSIDVKGSIGYIAPEYGVGNEVSTIGDVYSYGILLLELM 230
++ DFGLAR + + + + + ++APE + DV+S+G+LL E+
Sbjct: 230 MKIADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIF 287
>pdb|3LAU|A Chain A, Crystal Structure Of Aurora2 Kinase In Complex With A
Gsk3beta Inhibitor
Length = 287
Score = 45.8 bits (107), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 28/97 (28%), Positives = 48/97 (49%), Gaps = 7/97 (7%)
Query: 139 DVASALNYLHHDCQPVTAHCVLKPSNVLLDDDMTARVGDFGLARFLPPTRTQTSSIDVKG 198
++A+AL+Y H H +KP N+LL ++ DFG + P +R D+ G
Sbjct: 116 ELANALSYCHSK---RVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSR----RTDLCG 168
Query: 199 SIGYIAPEYGVGNEVSTIGDVYSYGILLLELMIREKP 235
++ Y+ PE G D++S G+L E ++ + P
Sbjct: 169 TLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPP 205
>pdb|2FH9|A Chain A, Structure And Dimerization Of The Kinase Domain From Yeast
Snf1
Length = 274
Score = 45.8 bits (107), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 34/103 (33%), Positives = 50/103 (48%), Gaps = 15/103 (14%)
Query: 140 VASALNYLHHDCQPVTAHCVLKPSNVLLDDDMTARVGDFGLARFLPPTRTQTSSIDVKGS 199
+ SA+ Y H + H LKP N+LLD+ + ++ DFGL+ + +S GS
Sbjct: 116 IISAVEYCH---RHKIVHRDLKPENLLLDEHLNVKIADFGLSNIMTDGNFLKTSC---GS 169
Query: 200 IGYIAPE-----YGVGNEVSTIGDVYSYGILLLELMIREKPSD 237
Y APE G EV DV+S G++L ++ R P D
Sbjct: 170 PNYAAPEVISGKLYAGPEV----DVWSCGVILYVMLCRRLPFD 208
>pdb|1JOW|B Chain B, Crystal Structure Of A Complex Of Human Cdk6 And A Viral
Cyclin
pdb|1XO2|B Chain B, Crystal Structure Of A Human Cyclin-Dependent Kinase 6
Complex With A Flavonol Inhibitor, Fisetin
pdb|2EUF|B Chain B, X-Ray Structure Of Human Cdk6-Vcyclin In Complex With The
Inhibitor Pd0332991
pdb|2F2C|B Chain B, X-Ray Structure Of Human Cdk6-Vcyclinwith The Inhibitor
Aminopurvalanol
Length = 308
Score = 45.8 bits (107), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 46/192 (23%), Positives = 81/192 (42%), Gaps = 25/192 (13%)
Query: 64 IAECKALRNIRHRNLIKVLTACLGVDYQGNDFKALVYEFMHNRSLKEWLYPISKE---DE 120
+A + L H N++++ C LV+E + ++ L +L + + E
Sbjct: 62 VAVLRHLETFEHPNVVRLFDVCTVSRTDRETKLTLVFEHV-DQDLTTYLDKVPEPGVPTE 120
Query: 121 TYKRPXXXXXXXXXXIAIDVASALNYLHHDCQPVTAHCVLKPSNVLLDDDMTARVGDFGL 180
T K + + L++LH H LKP N+L+ ++ DFGL
Sbjct: 121 TIK-----------DMMFQLLRGLDFLHSH---RVVHRDLKPQNILVTSSGQIKLADFGL 166
Query: 181 ARFLPPTRTQTSSIDVKGSIGYIAPEYGVGNEVSTIGDVYSYGILLLELMIREKPSDIMF 240
AR Q + V ++ Y APE + + +T D++S G + E M R KP +F
Sbjct: 167 ARIY---SFQMALTSVVVTLWYRAPEVLLQSSYATPVDLWSVGCIFAE-MFRRKP---LF 219
Query: 241 EGDMNLHKFAKM 252
G ++ + K+
Sbjct: 220 RGSSDVDQLGKI 231
>pdb|3NUP|A Chain A, Cdk6 (Monomeric) In Complex With Inhibitor
pdb|3NUX|A Chain A, Cdk6 (Monomeric) In Complex With Inhibitor
pdb|4AUA|A Chain A, Liganded X-ray Crystal Structure Of Cyclin Dependent
Kinase 6 (cdk6)
pdb|4EZ5|A Chain A, Cdk6 (monomeric) In Complex With Inhibitor
Length = 307
Score = 45.8 bits (107), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 46/192 (23%), Positives = 81/192 (42%), Gaps = 25/192 (13%)
Query: 64 IAECKALRNIRHRNLIKVLTACLGVDYQGNDFKALVYEFMHNRSLKEWLYPISKE---DE 120
+A + L H N++++ C LV+E + ++ L +L + + E
Sbjct: 62 VAVLRHLETFEHPNVVRLFDVCTVSRTDRETKLTLVFEHV-DQDLTTYLDKVPEPGVPTE 120
Query: 121 TYKRPXXXXXXXXXXIAIDVASALNYLHHDCQPVTAHCVLKPSNVLLDDDMTARVGDFGL 180
T K + + L++LH H LKP N+L+ ++ DFGL
Sbjct: 121 TIK-----------DMMFQLLRGLDFLHSH---RVVHRDLKPQNILVTSSGQIKLADFGL 166
Query: 181 ARFLPPTRTQTSSIDVKGSIGYIAPEYGVGNEVSTIGDVYSYGILLLELMIREKPSDIMF 240
AR Q + V ++ Y APE + + +T D++S G + E M R KP +F
Sbjct: 167 ARIY---SFQMALTSVVVTLWYRAPEVLLQSSYATPVDLWSVGCIFAE-MFRRKP---LF 219
Query: 241 EGDMNLHKFAKM 252
G ++ + K+
Sbjct: 220 RGSSDVDQLGKI 231
>pdb|2BMC|A Chain A, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|B Chain B, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|C Chain C, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|D Chain D, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|E Chain E, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|F Chain F, Aurora-2 T287d T288d Complexed With Pha-680632
Length = 306
Score = 45.8 bits (107), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 30/115 (26%), Positives = 55/115 (47%), Gaps = 11/115 (9%)
Query: 139 DVASALNYLHHDCQPVTAHCVLKPSNVLLDDDMTARVGDFGLARFLPPTRTQTSSIDVKG 198
++A+AL+Y H H +KP N+LL ++ DFG + P +R D+ G
Sbjct: 142 ELANALSYCHSK---RVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRD----DLCG 194
Query: 199 SIGYIAPEYGVGNEVSTIGDVYSYGILLLELMIREKPSDIMFEGDMNLHKFAKMA 253
++ Y+ PE G D++S G+L E ++ + P FE + + +++
Sbjct: 195 TLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPP----FEANTYQETYKRIS 245
>pdb|4EWH|B Chain B, Co-Crystal Structure Of Ack1 With Inhibitor
pdb|4EWH|A Chain A, Co-Crystal Structure Of Ack1 With Inhibitor
Length = 275
Score = 45.8 bits (107), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 51/199 (25%), Positives = 71/199 (35%), Gaps = 19/199 (9%)
Query: 54 LRRQGAFKSFIAECKALRNIRHRNLIKVLTACLGVDYQGNDFKALVYEFMHNRSLKEWLY 113
L + A FI E A+ ++ HRNLI++ L + +V E SL
Sbjct: 49 LSQPEAMDDFIREVNAMHSLDHRNLIRLYGVVLTPPMK------MVTELAPLGSLL---- 98
Query: 114 PISKEDETYKRPXXXXXXXXXXIAIDVASALNYLHHDCQPVTAHCVLKPSNVLLDDDMTA 173
D K A+ VA + YL H L N+LL
Sbjct: 99 -----DRLRKHQGHFLLGTLSRYAVQVAEGMGYLE---SKRFIHRDLAARNLLLATRDLV 150
Query: 174 RVGDFGLARFLPPTRTQTSSID-VKGSIGYIAPEYGVGNEVSTIGDVYSYGILLLELMIR 232
++GDFGL R LP + K + APE S D + +G+ L E+
Sbjct: 151 KIGDFGLMRALPQNDDHXVMQEHRKVPFAWCAPESLKTRTFSHASDTWMFGVTLWEMFTY 210
Query: 233 EKPSDIMFEGDMNLHKFAK 251
+ I G LHK K
Sbjct: 211 GQEPWIGLNGSQILHKIDK 229
>pdb|2B9F|A Chain A, Crystal Structure Of Non-Phosphorylated Fus3
Length = 353
Score = 45.8 bits (107), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 34/105 (32%), Positives = 51/105 (48%), Gaps = 18/105 (17%)
Query: 137 AIDVASALNYLHHDCQPVTAHCVLKPSNVLLDDDMTARVGDFGLARFL--------PPTR 188
A+ V N +H D LKPSN+L++ + +V DFGLAR + PT
Sbjct: 124 AVKVLHGSNVIHRD---------LKPSNLLINSNCDLKVCDFGLARIIDESAADNSEPTG 174
Query: 189 TQTSSIDVKGSIGYIAPEYGVGN-EVSTIGDVYSYGILLLELMIR 232
Q+ + + Y APE + + + S DV+S G +L EL +R
Sbjct: 175 QQSGMTEYVATRWYRAPEVMLTSAKYSRAMDVWSCGCILAELFLR 219
>pdb|2F9G|A Chain A, Crystal Structure Of Fus3 Phosphorylated On Tyr182
Length = 353
Score = 45.8 bits (107), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 34/105 (32%), Positives = 51/105 (48%), Gaps = 18/105 (17%)
Query: 137 AIDVASALNYLHHDCQPVTAHCVLKPSNVLLDDDMTARVGDFGLARFL--------PPTR 188
A+ V N +H D LKPSN+L++ + +V DFGLAR + PT
Sbjct: 124 AVKVLHGSNVIHRD---------LKPSNLLINSNCDLKVCDFGLARIIDESAADNSEPTG 174
Query: 189 TQTSSIDVKGSIGYIAPEYGVGN-EVSTIGDVYSYGILLLELMIR 232
Q+ + + Y APE + + + S DV+S G +L EL +R
Sbjct: 175 QQSGMTEXVATRWYRAPEVMLTSAKYSRAMDVWSCGCILAELFLR 219
>pdb|1U54|A Chain A, Crystal Structures Of The Phosphorylated And
Unphosphorylated Kinase Domains Of The Cdc42-Associated
Tyrosine Kinase Ack1 Bound To Amp-Pcp
Length = 291
Score = 45.8 bits (107), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 51/199 (25%), Positives = 71/199 (35%), Gaps = 19/199 (9%)
Query: 54 LRRQGAFKSFIAECKALRNIRHRNLIKVLTACLGVDYQGNDFKALVYEFMHNRSLKEWLY 113
L + A FI E A+ ++ HRNLI++ L + +V E SL
Sbjct: 59 LSQPEAMDDFIREVNAMHSLDHRNLIRLYGVVLTPPMK------MVTELAPLGSLL---- 108
Query: 114 PISKEDETYKRPXXXXXXXXXXIAIDVASALNYLHHDCQPVTAHCVLKPSNVLLDDDMTA 173
D K A+ VA + YL H L N+LL
Sbjct: 109 -----DRLRKHQGHFLLGTLSRYAVQVAEGMGYLESK---RFIHRDLAARNLLLATRDLV 160
Query: 174 RVGDFGLARFLPPTRTQTSSID-VKGSIGYIAPEYGVGNEVSTIGDVYSYGILLLELMIR 232
++GDFGL R LP + K + APE S D + +G+ L E+
Sbjct: 161 KIGDFGLMRALPQNDDHXVMQEHRKVPFAWCAPESLKTRTFSHASDTWMFGVTLWEMFTY 220
Query: 233 EKPSDIMFEGDMNLHKFAK 251
+ I G LHK K
Sbjct: 221 GQEPWIGLNGSQILHKIDK 239
>pdb|4HZR|A Chain A, Crystal Structure Of Ack1 Kinase Domain
pdb|4HZR|B Chain B, Crystal Structure Of Ack1 Kinase Domain
Length = 277
Score = 45.4 bits (106), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 51/199 (25%), Positives = 71/199 (35%), Gaps = 19/199 (9%)
Query: 54 LRRQGAFKSFIAECKALRNIRHRNLIKVLTACLGVDYQGNDFKALVYEFMHNRSLKEWLY 113
L + A FI E A+ ++ HRNLI++ L + +V E SL
Sbjct: 53 LSQPEAMDDFIREVNAMHSLDHRNLIRLYGVVLTPPMK------MVTELAPLGSLL---- 102
Query: 114 PISKEDETYKRPXXXXXXXXXXIAIDVASALNYLHHDCQPVTAHCVLKPSNVLLDDDMTA 173
D K A+ VA + YL H L N+LL
Sbjct: 103 -----DRLRKHQGHFLLGTLSRYAVQVAEGMGYLE---SKRFIHRDLAARNLLLATRDLV 154
Query: 174 RVGDFGLARFLPPTRTQTSSID-VKGSIGYIAPEYGVGNEVSTIGDVYSYGILLLELMIR 232
++GDFGL R LP + K + APE S D + +G+ L E+
Sbjct: 155 KIGDFGLMRALPQNDDHYVMQEHRKVPFAWCAPESLKTRTFSHASDTWMFGVTLWEMFTY 214
Query: 233 EKPSDIMFEGDMNLHKFAK 251
+ I G LHK K
Sbjct: 215 GQEPWIGLNGSQILHKIDK 233
>pdb|1I44|A Chain A, Crystallographic Studies Of An Activation Loop Mutant Of
The Insulin Receptor Tyrosine Kinase
Length = 306
Score = 45.4 bits (106), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 40/174 (22%), Positives = 76/174 (43%), Gaps = 9/174 (5%)
Query: 63 FIAECKALRNIRHRNLIKVLTACLGVDYQGNDFKALVYEFMHNRSLKEWLYPISKEDETY 122
F+ E ++ +++++L GV +G +V E M + LK +L + E E
Sbjct: 67 FLNEASVMKGFTCHHVVRLL----GVVSKGQP-TLVVMELMAHGDLKSYLRSLRPEAENN 121
Query: 123 KRPXXXXXXXXXXIAIDVASALNYLHHDCQPVTAHCVLKPSNVLLDDDMTARVGDFGLAR 182
+A ++A + YL+ H L N ++ D T ++GDFG+ R
Sbjct: 122 PGRPPPTLQEMIQMAAEIADGMAYLNAK---KFVHRDLAARNCMVAHDFTVKIGDFGMTR 178
Query: 183 FLPPTRTQTSSIDVKGSIGYIAPEYGVGNEVSTIGDVYSYGILLLELM-IREKP 235
+ T + ++APE +T D++S+G++L E+ + E+P
Sbjct: 179 DIYETAYYRKGGKGLLPVRWMAPESLKDGVFTTSSDMWSFGVVLWEITSLAEQP 232
>pdb|3ETA|A Chain A, Kinase Domain Of Insulin Receptor Complexed With A Pyrrolo
Pyridine Inhibitor
pdb|3ETA|B Chain B, Kinase Domain Of Insulin Receptor Complexed With A Pyrrolo
Pyridine Inhibitor
Length = 317
Score = 45.4 bits (106), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 40/174 (22%), Positives = 76/174 (43%), Gaps = 9/174 (5%)
Query: 63 FIAECKALRNIRHRNLIKVLTACLGVDYQGNDFKALVYEFMHNRSLKEWLYPISKEDETY 122
F+ E ++ +++++L GV +G +V E M + LK +L + E E
Sbjct: 66 FLNEASVMKGFTCHHVVRLL----GVVSKGQP-TLVVMELMAHGDLKSYLRSLRPEAENN 120
Query: 123 KRPXXXXXXXXXXIAIDVASALNYLHHDCQPVTAHCVLKPSNVLLDDDMTARVGDFGLAR 182
+A ++A + YL+ H L N ++ D T ++GDFG+ R
Sbjct: 121 PGRPPPTLQEMIQMAAEIADGMAYLNAK---KFVHRDLAARNCMVAHDFTVKIGDFGMTR 177
Query: 183 FLPPTRTQTSSIDVKGSIGYIAPEYGVGNEVSTIGDVYSYGILLLELM-IREKP 235
+ T + ++APE +T D++S+G++L E+ + E+P
Sbjct: 178 DIYETDYYRKGGKGLLPVRWMAPESLKDGVFTTSSDMWSFGVVLWEITSLAEQP 231
>pdb|1MUO|A Chain A, Crystal Structure Of Aurora-2, An Oncogenic Serine-
Threonine Kinase
Length = 297
Score = 45.4 bits (106), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 30/115 (26%), Positives = 55/115 (47%), Gaps = 11/115 (9%)
Query: 139 DVASALNYLHHDCQPVTAHCVLKPSNVLLDDDMTARVGDFGLARFLPPTRTQTSSIDVKG 198
++A+AL+Y H H +KP N+LL ++ DFG + P +R T + G
Sbjct: 133 ELANALSYCHSK---RVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTT----LCG 185
Query: 199 SIGYIAPEYGVGNEVSTIGDVYSYGILLLELMIREKPSDIMFEGDMNLHKFAKMA 253
++ Y+ PE G D++S G+L E ++ + P FE + + +++
Sbjct: 186 TLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPP----FEANTYQETYKRIS 236
>pdb|3GGF|A Chain A, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
Mst4 In Complex With An Quinazolin
pdb|3GGF|B Chain B, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
Mst4 In Complex With An Quinazolin
Length = 301
Score = 45.4 bits (106), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 31/101 (30%), Positives = 51/101 (50%), Gaps = 5/101 (4%)
Query: 139 DVASALNYLHHDCQPVTAHCVLKPSNVLLDDDMTARVGDFGLARFLPPTRTQTSSIDVKG 198
++ L+YLH + + H +K +NVLL + ++ DFG+A L T TQ G
Sbjct: 128 EILKGLDYLHSEKK---IHRDIKAANVLLSEQGDVKLADFGVAGQL--TDTQIKRNTFVG 182
Query: 199 SIGYIAPEYGVGNEVSTIGDVYSYGILLLELMIREKPSDIM 239
+ ++APE + + D++S GI +EL E P+ M
Sbjct: 183 TPFWMAPEVIQQSAYDSKADIWSLGITAIELAKGEPPNSDM 223
>pdb|3EKK|A Chain A, Insulin Receptor Kinase Complexed With An Inhibitor
pdb|3EKN|A Chain A, Insulin Receptor Kinase Complexed With An Inhibitor
Length = 307
Score = 45.4 bits (106), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 40/174 (22%), Positives = 76/174 (43%), Gaps = 9/174 (5%)
Query: 63 FIAECKALRNIRHRNLIKVLTACLGVDYQGNDFKALVYEFMHNRSLKEWLYPISKEDETY 122
F+ E ++ +++++L GV +G +V E M + LK +L + E E
Sbjct: 68 FLNEASVMKGFTCHHVVRLL----GVVSKGQP-TLVVMELMAHGDLKSYLRSLRPEAENN 122
Query: 123 KRPXXXXXXXXXXIAIDVASALNYLHHDCQPVTAHCVLKPSNVLLDDDMTARVGDFGLAR 182
+A ++A + YL+ H L N ++ D T ++GDFG+ R
Sbjct: 123 PGRPPPTLQEMIQMAAEIADGMAYLNAKK---FVHRNLAARNCMVAHDFTVKIGDFGMTR 179
Query: 183 FLPPTRTQTSSIDVKGSIGYIAPEYGVGNEVSTIGDVYSYGILLLELM-IREKP 235
+ T + ++APE +T D++S+G++L E+ + E+P
Sbjct: 180 DIYETDYYRKGGKGLLPVRWMAPESLKDGVFTTSSDMWSFGVVLWEITSLAEQP 233
>pdb|4HZS|A Chain A, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|B Chain B, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|C Chain C, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|D Chain D, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
Length = 341
Score = 45.4 bits (106), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 51/199 (25%), Positives = 71/199 (35%), Gaps = 19/199 (9%)
Query: 54 LRRQGAFKSFIAECKALRNIRHRNLIKVLTACLGVDYQGNDFKALVYEFMHNRSLKEWLY 113
L + A FI E A+ ++ HRNLI++ L + +V E SL
Sbjct: 53 LSQPEAMDDFIREVNAMHSLDHRNLIRLYGVVLTPPMK------MVTELAPLGSLL---- 102
Query: 114 PISKEDETYKRPXXXXXXXXXXIAIDVASALNYLHHDCQPVTAHCVLKPSNVLLDDDMTA 173
D K A+ VA + YL H L N+LL
Sbjct: 103 -----DRLRKHQGHFLLGTLSRYAVQVAEGMGYLESK---RFIHRDLAARNLLLATRDLV 154
Query: 174 RVGDFGLARFLPPTRTQTSSID-VKGSIGYIAPEYGVGNEVSTIGDVYSYGILLLELMIR 232
++GDFGL R LP + K + APE S D + +G+ L E+
Sbjct: 155 KIGDFGLMRALPQNDDHYVMQEHRKVPFAWCAPESLKTRTFSHASDTWMFGVTLWEMFTY 214
Query: 233 EKPSDIMFEGDMNLHKFAK 251
+ I G LHK K
Sbjct: 215 GQEPWIGLNGSQILHKIDK 233
>pdb|2W5A|A Chain A, Human Nek2 Kinase Adp-Bound
pdb|2WQO|A Chain A, Structure Of Nek2 Bound To The Aminopyridine Cct241950
pdb|2XK3|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 35
pdb|2XK4|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 17
pdb|2XK6|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 36
pdb|2XK7|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 23
pdb|2XK8|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 15
pdb|2XKC|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 14
pdb|2XKD|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 12
pdb|2XKF|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 2
pdb|2XKE|A Chain A, Structure Of Nek2 Bound To Aminipyrazine Compound 5
pdb|2XNM|A Chain A, Structure Of Nek2 Bound To Cct
pdb|2XNN|A Chain A, Structure Of Nek2 Bound To Cct242430
pdb|2XNO|A Chain A, Structure Of Nek2 Bound To Cct243779
pdb|2XNP|A Chain A, Structure Of Nek2 Bound To Cct244858
pdb|4AFE|A Chain A, Nek2 Bound To Hybrid Compound 21
Length = 279
Score = 45.4 bits (106), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 44/173 (25%), Positives = 71/173 (41%), Gaps = 21/173 (12%)
Query: 63 FIAECKALRNIRHRNLIKVLTACLGVDYQGNDFKALVYEFMHNRSLKEWLYPISKE---- 118
++E LR ++H N+++ + + N +V E+ L + +KE
Sbjct: 52 LVSEVNLLRELKHPNIVRYYDRIID---RTNTTLYIVMEYCEGGDLASVITKGTKERQYL 108
Query: 119 DETYKRPXXXXXXXXXXIAIDVASALNYLHH--DCQPVTAHCVLKPSNVLLDDDMTARVG 176
DE + + + AL H D H LKP+NV LD ++G
Sbjct: 109 DEEF----------VLRVMTQLTLALKECHRRSDGGHTVLHRDLKPANVFLDGKQNVKLG 158
Query: 177 DFGLARFLPPTRTQTSSIDVKGSIGYIAPEYGVGNEVSTIGDVYSYGILLLEL 229
DFGLAR L + + G+ Y++PE + D++S G LL EL
Sbjct: 159 DFGLARIL--NHDTSFAKTFVGTPYYMSPEQMNRMSYNEKSDIWSLGCLLYEL 209
>pdb|1P14|A Chain A, Crystal Structure Of A Catalytic-Loop Mutant Of The
Insulin Receptor Tyrosine Kinase
Length = 306
Score = 45.4 bits (106), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 40/174 (22%), Positives = 76/174 (43%), Gaps = 9/174 (5%)
Query: 63 FIAECKALRNIRHRNLIKVLTACLGVDYQGNDFKALVYEFMHNRSLKEWLYPISKEDETY 122
F+ E ++ +++++L GV +G +V E M + LK +L + E E
Sbjct: 67 FLNEASVMKGFTCHHVVRLL----GVVSKGQP-TLVVMELMAHGDLKSYLRSLRPEAENN 121
Query: 123 KRPXXXXXXXXXXIAIDVASALNYLHHDCQPVTAHCVLKPSNVLLDDDMTARVGDFGLAR 182
+A ++A + YL+ H L N ++ D T ++GDFG+ R
Sbjct: 122 PGRPPPTLQEMIQMAAEIADGMAYLNAK---KFVHRNLAARNCMVAHDFTVKIGDFGMTR 178
Query: 183 FLPPTRTQTSSIDVKGSIGYIAPEYGVGNEVSTIGDVYSYGILLLELM-IREKP 235
+ T + ++APE +T D++S+G++L E+ + E+P
Sbjct: 179 DIYETDYYRKGGKGLLPVRWMAPESLKDGVFTTSSDMWSFGVVLWEITSLAEQP 232
>pdb|2IW8|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82h-L83v-
H84d Mutant With An O6-Cyclohexylmethylguanine Inhibitor
pdb|2IW8|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82h-L83v-
H84d Mutant With An O6-Cyclohexylmethylguanine Inhibitor
Length = 302
Score = 45.4 bits (106), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 31/98 (31%), Positives = 51/98 (52%), Gaps = 9/98 (9%)
Query: 157 HCVLKPSNVLLDDDMTARVGDFGLAR-FLPPTRTQTSSIDVKGSIGYIAPEYGVG-NEVS 214
H LKP N+L++ + ++ DFGLAR F P RT + ++ Y APE +G S
Sbjct: 129 HRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEV---VTLWYRAPEILLGCKYYS 185
Query: 215 TIGDVYSYGILLLELMIREKPSDIMFEGDMNLHKFAKM 252
T D++S G + E++ R +F GD + + ++
Sbjct: 186 TAVDIWSLGCIFAEMVTRRA----LFPGDSEIDQLFRI 219
>pdb|4ID7|A Chain A, Ack1 Kinase In Complex With The Inhibitor
Cis-3-[8-amino-1-(4-
Phenoxyphenyl)imidazo[1,5-a]pyrazin-3-yl]cyclobutanol
Length = 273
Score = 45.4 bits (106), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 51/199 (25%), Positives = 71/199 (35%), Gaps = 19/199 (9%)
Query: 54 LRRQGAFKSFIAECKALRNIRHRNLIKVLTACLGVDYQGNDFKALVYEFMHNRSLKEWLY 113
L + A FI E A+ ++ HRNLI++ L + +V E SL
Sbjct: 49 LSQPEAMDDFIREVNAMHSLDHRNLIRLYGVVLTPPMK------MVTELAPLGSLL---- 98
Query: 114 PISKEDETYKRPXXXXXXXXXXIAIDVASALNYLHHDCQPVTAHCVLKPSNVLLDDDMTA 173
D K A+ VA + YL H L N+LL
Sbjct: 99 -----DRLRKHQGHFLLGTLSRYAVQVAEGMGYLE---SKRFIHRDLAARNLLLATRDLV 150
Query: 174 RVGDFGLARFLPPTRTQTSSID-VKGSIGYIAPEYGVGNEVSTIGDVYSYGILLLELMIR 232
++GDFGL R LP + K + APE S D + +G+ L E+
Sbjct: 151 KIGDFGLMRALPQNDDHYVMQEHRKVPFAWCAPESLKTRTFSHASDTWMFGVTLWEMFTY 210
Query: 233 EKPSDIMFEGDMNLHKFAK 251
+ I G LHK K
Sbjct: 211 GQEPWIGLNGSQILHKIDK 229
>pdb|4B99|A Chain A, Crystal Structure Of Mapk7 (Erk5) With Inhibitor
Length = 398
Score = 45.4 bits (106), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 33/110 (30%), Positives = 57/110 (51%), Gaps = 10/110 (9%)
Query: 143 ALNYLHHDCQPVTAHCVLKPSNVLLDDDMTARVGDFGLARFL--PPTRTQTSSIDVKGSI 200
L Y+H Q + H LKPSN+L++++ ++GDFG+AR L P Q + +
Sbjct: 170 GLKYMH-SAQVI--HRDLKPSNLLVNENCELKIGDFGMARGLCTSPAEHQYFMTEYVATR 226
Query: 201 GYIAPEYGVG-NEVSTIGDVYSYGILLLELMIREKPSDIMFEGDMNLHKF 249
Y APE + +E + D++S G + E++ R + +F G +H+
Sbjct: 227 WYRAPELMLSLHEYTQAIDLWSVGCIFGEMLARRQ----LFPGKNYVHQL 272
>pdb|3SXR|A Chain A, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complex With Dasatinib
pdb|3SXR|B Chain B, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complex With Dasatinib
pdb|3SXS|A Chain A, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complexed With Pp2
Length = 268
Score = 45.4 bits (106), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 50/220 (22%), Positives = 90/220 (40%), Gaps = 37/220 (16%)
Query: 21 IEVGKLKNLEILDVSRNMLEENLISAGTFGFSHLRRQGAFKSFIAECKALRNIRHRNLIK 80
+++GK K DV+ M++E +S F E + + + H L+K
Sbjct: 24 VKLGKWKGQ--YDVAVKMIKEGSMSE--------------DEFFQEAQTMMKLSHPKLVK 67
Query: 81 VLTACLGVDYQGNDFK-ALVYEFMHNRSLKEWLYPISKEDETYKRPXXXXXXXXXXIAID 139
C ++ +V E++ N L +L K E + D
Sbjct: 68 FYGVC------SKEYPIYIVTEYISNGCLLNYLRSHGKGLEP---------SQLLEMCYD 112
Query: 140 VASALNYLHHDCQPVTAHCVLKPSNVLLDDDMTARVGDFGLARFLPPTRTQTSSIDVKGS 199
V + +L H L N L+D D+ +V DFG+ R++ + SS+ K
Sbjct: 113 VCEGMAFLESH---QFIHRDLAARNCLVDRDLCVKVSDFGMTRYVLDDQY-VSSVGTKFP 168
Query: 200 IGYIAPEYGVGNEVSTIGDVYSYGILLLELM-IREKPSDI 238
+ + APE + S+ DV+++GIL+ E+ + + P D+
Sbjct: 169 VKWSAPEVFHYFKYSSKSDVWAFGILMWEVFSLGKMPYDL 208
>pdb|3D94|A Chain A, Crystal Structure Of The Insulin-Like Growth Factor-1
Receptor Kinase In Complex With Pqip
Length = 301
Score = 45.4 bits (106), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 40/174 (22%), Positives = 76/174 (43%), Gaps = 9/174 (5%)
Query: 63 FIAECKALRNIRHRNLIKVLTACLGVDYQGNDFKALVYEFMHNRSLKEWLYPISKEDETY 122
F+ E ++ +++++L GV QG ++ E M LK +L + E E
Sbjct: 62 FLNEASVMKEFNCHHVVRLL----GVVSQGQP-TLVIMELMTRGDLKSYLRSLRPEMENN 116
Query: 123 KRPXXXXXXXXXXIAIDVASALNYLHHDCQPVTAHCVLKPSNVLLDDDMTARVGDFGLAR 182
+A ++A + YL+ + H L N + +D T ++GDFG+ R
Sbjct: 117 PVLAPPSLSKMIQMAGEIADGMAYLNANK---FVHRDLAARNCXVAEDFTVKIGDFGMTR 173
Query: 183 FLPPTRTQTSSIDVKGSIGYIAPEYGVGNEVSTIGDVYSYGILLLEL-MIREKP 235
+ T + +++PE +T DV+S+G++L E+ + E+P
Sbjct: 174 DIYETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQP 227
>pdb|2I1M|A Chain A, Cfms Tyrosine Kinase (Tie2 Kid) In Complex With An
Arylamide Inhibitor
Length = 333
Score = 45.4 bits (106), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 36/109 (33%), Positives = 53/109 (48%), Gaps = 18/109 (16%)
Query: 136 IAIDVASALNYLHHDCQPV-------TAHCV---LKPSNVLLDDDMTARVGDFGLARFLP 185
IA AS + LH Q + +C+ + NVLL + A++GDFGLAR +
Sbjct: 156 IANSTASTRDLLHFSSQVAQGMAFLASKNCIHRDVAARNVLLTNGHVAKIGDFGLARDI- 214
Query: 186 PTRTQTSSIDVKGS----IGYIAPEYGVGNEVSTIGDVYSYGILLLELM 230
S+ VKG+ + ++APE + DV+SYGILL E+
Sbjct: 215 ---MNDSNYIVKGNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIF 260
>pdb|3UNZ|A Chain A, Aurora A In Complex With Rpm1679
pdb|3UNZ|B Chain B, Aurora A In Complex With Rpm1679
pdb|3UO4|A Chain A, Aurora A In Complex With Rpm1680
pdb|3UO5|A Chain A, Aurora A In Complex With Yl1-038-31
pdb|3UO6|A Chain A, Aurora A In Complex With Yl5-083
pdb|3UO6|B Chain B, Aurora A In Complex With Yl5-083
pdb|3UOD|A Chain A, Aurora A In Complex With Rpm1693
pdb|3UOH|A Chain A, Aurora A In Complex With Rpm1722
pdb|3UOH|B Chain B, Aurora A In Complex With Rpm1722
pdb|3UOJ|A Chain A, Aurora A In Complex With Rpm1715
pdb|3UOJ|B Chain B, Aurora A In Complex With Rpm1715
pdb|3UOK|A Chain A, Aurora A In Complex With Yl5-81-1
pdb|3UOK|B Chain B, Aurora A In Complex With Yl5-81-1
pdb|3UOL|A Chain A, Aurora A In Complex With So2-162
pdb|3UOL|B Chain B, Aurora A In Complex With So2-162
pdb|3UP2|A Chain A, Aurora A In Complex With Rpm1686
pdb|3UP7|A Chain A, Aurora A In Complex With Yl1-038-09
pdb|4DEA|A Chain A, Aurora A In Complex With Yl1-038-18
pdb|4DEB|A Chain A, Aurora A In Complex With Rk2-17-01
pdb|4DED|A Chain A, Aurora A In Complex With Yl1-038-21
pdb|4DEE|A Chain A, Aurora A In Complex With Adp
Length = 279
Score = 45.4 bits (106), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 30/115 (26%), Positives = 55/115 (47%), Gaps = 11/115 (9%)
Query: 139 DVASALNYLHHDCQPVTAHCVLKPSNVLLDDDMTARVGDFGLARFLPPTRTQTSSIDVKG 198
++A+AL+Y H H +KP N+LL ++ DFG + P +R T + G
Sbjct: 117 ELANALSYCHSK---RVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRDT----LCG 169
Query: 199 SIGYIAPEYGVGNEVSTIGDVYSYGILLLELMIREKPSDIMFEGDMNLHKFAKMA 253
++ Y+ PE G D++S G+L E ++ + P FE + + +++
Sbjct: 170 TLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPP----FEANTYQETYKRIS 220
>pdb|2WTW|A Chain A, Aurora-A Inhibitor Structure (2nd Crystal Form)
Length = 285
Score = 45.4 bits (106), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 30/115 (26%), Positives = 55/115 (47%), Gaps = 11/115 (9%)
Query: 139 DVASALNYLHHDCQPVTAHCVLKPSNVLLDDDMTARVGDFGLARFLPPTRTQTSSIDVKG 198
++A+AL+Y H H +KP N+LL ++ DFG + P +R T + G
Sbjct: 121 ELANALSYCHSK---RVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTT----LCG 173
Query: 199 SIGYIAPEYGVGNEVSTIGDVYSYGILLLELMIREKPSDIMFEGDMNLHKFAKMA 253
++ Y+ PE G D++S G+L E ++ + P FE + + +++
Sbjct: 174 TLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPP----FEANTYQETYKRIS 224
>pdb|2XNG|A Chain A, Structure Of Aurora-A Bound To A Selective Imidazopyrazine
Inhibitor
Length = 283
Score = 45.4 bits (106), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 30/115 (26%), Positives = 55/115 (47%), Gaps = 11/115 (9%)
Query: 139 DVASALNYLHHDCQPVTAHCVLKPSNVLLDDDMTARVGDFGLARFLPPTRTQTSSIDVKG 198
++A+AL+Y H H +KP N+LL ++ DFG + P +R T + G
Sbjct: 119 ELANALSYCHSK---RVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTT----LCG 171
Query: 199 SIGYIAPEYGVGNEVSTIGDVYSYGILLLELMIREKPSDIMFEGDMNLHKFAKMA 253
++ Y+ PE G D++S G+L E ++ + P FE + + +++
Sbjct: 172 TLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPP----FEANTYQETYKRIS 222
>pdb|4EON|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With The Inhibitor Ro3306
pdb|4EON|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With The Inhibitor Ro3306
Length = 300
Score = 45.4 bits (106), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 31/98 (31%), Positives = 51/98 (52%), Gaps = 9/98 (9%)
Query: 157 HCVLKPSNVLLDDDMTARVGDFGLAR-FLPPTRTQTSSIDVKGSIGYIAPEYGVG-NEVS 214
H LKP N+L++ + ++ DFGLAR F P RT + ++ Y APE +G S
Sbjct: 127 HRDLKPENLLINTEGAIKLADFGLARAFGVPVRTYXHEV---VTLWYRAPEILLGCKYYS 183
Query: 215 TIGDVYSYGILLLELMIREKPSDIMFEGDMNLHKFAKM 252
T D++S G + E++ R +F GD + + ++
Sbjct: 184 TAVDIWSLGCIFAEMVTRRA----LFPGDSEIDQLFRI 217
>pdb|4EOK|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Nu6102
pdb|4EOK|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Nu6102
pdb|4EOL|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Ro3306
pdb|4EOL|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Ro3306
Length = 300
Score = 45.4 bits (106), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 31/98 (31%), Positives = 51/98 (52%), Gaps = 9/98 (9%)
Query: 157 HCVLKPSNVLLDDDMTARVGDFGLAR-FLPPTRTQTSSIDVKGSIGYIAPEYGVG-NEVS 214
H LKP N+L++ + ++ DFGLAR F P RT + ++ Y APE +G S
Sbjct: 128 HRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEV---VTLWYRAPEILLGCKYYS 184
Query: 215 TIGDVYSYGILLLELMIREKPSDIMFEGDMNLHKFAKM 252
T D++S G + E++ R +F GD + + ++
Sbjct: 185 TAVDIWSLGCIFAEMVTRRA----LFPGDSEIDQLFRI 218
>pdb|3EQP|B Chain B, Crystal Structure Of Ack1 With Compound T95
pdb|3EQP|A Chain A, Crystal Structure Of Ack1 With Compound T95
pdb|3EQR|A Chain A, Crystal Structure Of Ack1 With Compound T74
pdb|3EQR|B Chain B, Crystal Structure Of Ack1 With Compound T74
Length = 276
Score = 45.4 bits (106), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 51/199 (25%), Positives = 71/199 (35%), Gaps = 19/199 (9%)
Query: 54 LRRQGAFKSFIAECKALRNIRHRNLIKVLTACLGVDYQGNDFKALVYEFMHNRSLKEWLY 113
L + A FI E A+ ++ HRNLI++ L + +V E SL
Sbjct: 49 LSQPEAMDDFIREVNAMHSLDHRNLIRLYGVVLTPPMK------MVTELAPLGSLL---- 98
Query: 114 PISKEDETYKRPXXXXXXXXXXIAIDVASALNYLHHDCQPVTAHCVLKPSNVLLDDDMTA 173
D K A+ VA + YL H L N+LL
Sbjct: 99 -----DRLRKHQGHFLLGTLSRYAVQVAEGMGYLE---SKRFIHRDLAARNLLLATRDLV 150
Query: 174 RVGDFGLARFLPPTRTQTSSID-VKGSIGYIAPEYGVGNEVSTIGDVYSYGILLLELMIR 232
++GDFGL R LP + K + APE S D + +G+ L E+
Sbjct: 151 KIGDFGLMRALPQNDDHYVMQEHRKVPFAWCAPESLKTRTFSHASDTWMFGVTLWEMFTY 210
Query: 233 EKPSDIMFEGDMNLHKFAK 251
+ I G LHK K
Sbjct: 211 GQEPWIGLNGSQILHKIDK 229
>pdb|4EOJ|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With Atp
pdb|4EOJ|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With Atp
Length = 302
Score = 45.4 bits (106), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 31/98 (31%), Positives = 51/98 (52%), Gaps = 9/98 (9%)
Query: 157 HCVLKPSNVLLDDDMTARVGDFGLAR-FLPPTRTQTSSIDVKGSIGYIAPEYGVG-NEVS 214
H LKP N+L++ + ++ DFGLAR F P RT + ++ Y APE +G S
Sbjct: 129 HRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEV---VTLWYRAPEILLGCKYYS 185
Query: 215 TIGDVYSYGILLLELMIREKPSDIMFEGDMNLHKFAKM 252
T D++S G + E++ R +F GD + + ++
Sbjct: 186 TAVDIWSLGCIFAEMVTRRA----LFPGDSEIDQLFRI 219
>pdb|1IRK|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Human Insulin Receptor
Length = 306
Score = 45.4 bits (106), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 40/174 (22%), Positives = 76/174 (43%), Gaps = 9/174 (5%)
Query: 63 FIAECKALRNIRHRNLIKVLTACLGVDYQGNDFKALVYEFMHNRSLKEWLYPISKEDETY 122
F+ E ++ +++++L GV +G +V E M + LK +L + E E
Sbjct: 67 FLNEASVMKGFTCHHVVRLL----GVVSKGQP-TLVVMELMAHGDLKSYLRSLRPEAENN 121
Query: 123 KRPXXXXXXXXXXIAIDVASALNYLHHDCQPVTAHCVLKPSNVLLDDDMTARVGDFGLAR 182
+A ++A + YL+ H L N ++ D T ++GDFG+ R
Sbjct: 122 PGRPPPTLQEMIQMAAEIADGMAYLNAKK---FVHRDLAARNCMVAHDFTVKIGDFGMTR 178
Query: 183 FLPPTRTQTSSIDVKGSIGYIAPEYGVGNEVSTIGDVYSYGILLLELM-IREKP 235
+ T + ++APE +T D++S+G++L E+ + E+P
Sbjct: 179 DIYETDYYRKGGKGLLPVRWMAPESLKDGVFTTSSDMWSFGVVLWEITSLAEQP 232
>pdb|2PML|X Chain X, Crystal Structure Of Pfpk7 In Complex With An Atp Analogue
pdb|2PMN|X Chain X, Crystal Structure Of Pfpk7 In Complex With An Atp-Site
Inhibitor
pdb|2PMO|X Chain X, Crystal Structure Of Pfpk7 In Complex With Hymenialdisine
Length = 348
Score = 45.4 bits (106), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 35/144 (24%), Positives = 68/144 (47%), Gaps = 18/144 (12%)
Query: 98 LVYEFMHNRSL---KEWLYPISKEDETYKRPXXXXXXXXXXIAIDVASALNYLHHDCQPV 154
++YE+M N S+ E+ + + K + I V ++ +Y+H+ +
Sbjct: 120 IIYEYMENDSILKFDEYFFVLDKNYTCF-----IPIQVIKCIIKSVLNSFSYIHN--EKN 172
Query: 155 TAHCVLKPSNVLLDDDMTARVGDFGLARFLPPTRTQTSSIDVKGSIGYIAPEYGVGNEVS 214
H +KPSN+L+D + ++ DFG + ++ + + S +G+ ++ PE+ NE S
Sbjct: 173 ICHRDVKPSNILMDKNGRVKLSDFGESEYMVDKKIKGS----RGTYEFMPPEF-FSNESS 227
Query: 215 TIG---DVYSYGILLLELMIREKP 235
G D++S GI L + P
Sbjct: 228 YNGAKVDIWSLGICLYVMFYNVVP 251
>pdb|2J4Z|A Chain A, Structure Of Aurora-2 In Complex With Pha-680626
pdb|2J4Z|B Chain B, Structure Of Aurora-2 In Complex With Pha-680626
Length = 306
Score = 45.4 bits (106), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 30/115 (26%), Positives = 55/115 (47%), Gaps = 11/115 (9%)
Query: 139 DVASALNYLHHDCQPVTAHCVLKPSNVLLDDDMTARVGDFGLARFLPPTRTQTSSIDVKG 198
++A+AL+Y H H +KP N+LL ++ DFG + P +R T + G
Sbjct: 142 ELANALSYCHSK---RVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTT----LCG 194
Query: 199 SIGYIAPEYGVGNEVSTIGDVYSYGILLLELMIREKPSDIMFEGDMNLHKFAKMA 253
++ Y+ PE G D++S G+L E ++ + P FE + + +++
Sbjct: 195 TLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPP----FEANTYQETYKRIS 245
>pdb|4EOM|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With Atp
pdb|4EOM|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With Atp
Length = 301
Score = 45.4 bits (106), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 31/98 (31%), Positives = 51/98 (52%), Gaps = 9/98 (9%)
Query: 157 HCVLKPSNVLLDDDMTARVGDFGLAR-FLPPTRTQTSSIDVKGSIGYIAPEYGVG-NEVS 214
H LKP N+L++ + ++ DFGLAR F P RT + ++ Y APE +G S
Sbjct: 129 HRDLKPENLLINTEGAIKLADFGLARAFGVPVRTYXHEV---VTLWYRAPEILLGCKYYS 185
Query: 215 TIGDVYSYGILLLELMIREKPSDIMFEGDMNLHKFAKM 252
T D++S G + E++ R +F GD + + ++
Sbjct: 186 TAVDIWSLGCIFAEMVTRRA----LFPGDSEIDQLFRI 219
>pdb|2X6D|A Chain A, Aurora-A Bound To An Inhibitor
pdb|2X6E|A Chain A, Aurora-A Bound To An Inhibitor
Length = 285
Score = 45.4 bits (106), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 30/115 (26%), Positives = 55/115 (47%), Gaps = 11/115 (9%)
Query: 139 DVASALNYLHHDCQPVTAHCVLKPSNVLLDDDMTARVGDFGLARFLPPTRTQTSSIDVKG 198
++A+AL+Y H H +KP N+LL ++ DFG + P +R T + G
Sbjct: 121 ELANALSYCHSK---RVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTT----LCG 173
Query: 199 SIGYIAPEYGVGNEVSTIGDVYSYGILLLELMIREKPSDIMFEGDMNLHKFAKMA 253
++ Y+ PE G D++S G+L E ++ + P FE + + +++
Sbjct: 174 TLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPP----FEANTYQETYKRIS 224
>pdb|2JAV|A Chain A, Human Kinase With Pyrrole-Indolinone Ligand
pdb|2W5B|A Chain A, Human Nek2 Kinase Atpgammas-bound
pdb|2W5H|A Chain A, Human Nek2 Kinase Apo
Length = 279
Score = 45.1 bits (105), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 44/173 (25%), Positives = 71/173 (41%), Gaps = 21/173 (12%)
Query: 63 FIAECKALRNIRHRNLIKVLTACLGVDYQGNDFKALVYEFMHNRSLKEWLYPISKE---- 118
++E LR ++H N+++ + + N +V E+ L + +KE
Sbjct: 52 LVSEVNLLRELKHPNIVRYYDRIID---RTNTTLYIVMEYCEGGDLASVITKGTKERQYL 108
Query: 119 DETYKRPXXXXXXXXXXIAIDVASALNYLHH--DCQPVTAHCVLKPSNVLLDDDMTARVG 176
DE + + + AL H D H LKP+NV LD ++G
Sbjct: 109 DEEF----------VLRVMTQLTLALKECHRRSDGGHTVLHRDLKPANVFLDGKQNVKLG 158
Query: 177 DFGLARFLPPTRTQTSSIDVKGSIGYIAPEYGVGNEVSTIGDVYSYGILLLEL 229
DFGLAR L + + G+ Y++PE + D++S G LL EL
Sbjct: 159 DFGLARIL--NHDTSFAKAFVGTPYYMSPEQMNRMSYNEKSDIWSLGCLLYEL 209
>pdb|3HNG|A Chain A, Crystal Structure Of Vegfr1 In Complex With
N-(4-chlorophenyl)-2-
((pyridin-4-ylmethyl)amino)benzamide
Length = 360
Score = 45.1 bits (105), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 25/74 (33%), Positives = 38/74 (51%)
Query: 157 HCVLKPSNVLLDDDMTARVGDFGLARFLPPTRTQTSSIDVKGSIGYIAPEYGVGNEVSTI 216
H L N+LL ++ ++ DFGLAR + D + + ++APE ST
Sbjct: 222 HRDLAARNILLSENNVVKICDFGLARDIYKNPDYVRKGDTRLPLKWMAPESIFDKIYSTK 281
Query: 217 GDVYSYGILLLELM 230
DV+SYG+LL E+
Sbjct: 282 SDVWSYGVLLWEIF 295
>pdb|4IC7|A Chain A, Crystal Structure Of The Erk5 Kinase Domain In Complex
With An Mkk5 Binding Fragment
pdb|4IC7|D Chain D, Crystal Structure Of The Erk5 Kinase Domain In Complex
With An Mkk5 Binding Fragment
pdb|4IC8|A Chain A, Crystal Structure Of The Apo Erk5 Kinase Domain
pdb|4IC8|B Chain B, Crystal Structure Of The Apo Erk5 Kinase Domain
Length = 442
Score = 45.1 bits (105), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 33/110 (30%), Positives = 57/110 (51%), Gaps = 10/110 (9%)
Query: 143 ALNYLHHDCQPVTAHCVLKPSNVLLDDDMTARVGDFGLARFL--PPTRTQTSSIDVKGSI 200
L Y+H Q + H LKPSN+L++++ ++GDFG+AR L P Q + +
Sbjct: 171 GLKYMH-SAQVI--HRDLKPSNLLVNENCELKIGDFGMARGLCTSPAEHQYFMTEYVATR 227
Query: 201 GYIAPEYGVG-NEVSTIGDVYSYGILLLELMIREKPSDIMFEGDMNLHKF 249
Y APE + +E + D++S G + E++ R + +F G +H+
Sbjct: 228 WYRAPELMLSLHEYTQAIDLWSVGCIFGEMLARRQ----LFPGKNYVHQL 273
>pdb|2J50|A Chain A, Structure Of Aurora-2 In Complex With Pha-739358
pdb|2J50|B Chain B, Structure Of Aurora-2 In Complex With Pha-739358
Length = 280
Score = 45.1 bits (105), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 30/115 (26%), Positives = 55/115 (47%), Gaps = 11/115 (9%)
Query: 139 DVASALNYLHHDCQPVTAHCVLKPSNVLLDDDMTARVGDFGLARFLPPTRTQTSSIDVKG 198
++A+AL+Y H H +KP N+LL ++ DFG + P +R T + G
Sbjct: 116 ELANALSYCHSK---RVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTT----LCG 168
Query: 199 SIGYIAPEYGVGNEVSTIGDVYSYGILLLELMIREKPSDIMFEGDMNLHKFAKMA 253
++ Y+ PE G D++S G+L E ++ + P FE + + +++
Sbjct: 169 TLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPP----FEANTYQETYKRIS 219
>pdb|1U46|A Chain A, Crystal Structure Of The Unphosphorylated Kinase Domain Of
The Tyrosine Kinase Ack1
pdb|1U46|B Chain B, Crystal Structure Of The Unphosphorylated Kinase Domain Of
The Tyrosine Kinase Ack1
pdb|1U4D|A Chain A, Structure Of The Ack1 Kinase Domain Bound To
Debromohymenialdisine
pdb|1U4D|B Chain B, Structure Of The Ack1 Kinase Domain Bound To
Debromohymenialdisine
pdb|1U54|B Chain B, Crystal Structures Of The Phosphorylated And
Unphosphorylated Kinase Domains Of The Cdc42-Associated
Tyrosine Kinase Ack1 Bound To Amp-Pcp
Length = 291
Score = 45.1 bits (105), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 51/199 (25%), Positives = 71/199 (35%), Gaps = 19/199 (9%)
Query: 54 LRRQGAFKSFIAECKALRNIRHRNLIKVLTACLGVDYQGNDFKALVYEFMHNRSLKEWLY 113
L + A FI E A+ ++ HRNLI++ L + +V E SL
Sbjct: 59 LSQPEAMDDFIREVNAMHSLDHRNLIRLYGVVLTPPMK------MVTELAPLGSLL---- 108
Query: 114 PISKEDETYKRPXXXXXXXXXXIAIDVASALNYLHHDCQPVTAHCVLKPSNVLLDDDMTA 173
D K A+ VA + YL H L N+LL
Sbjct: 109 -----DRLRKHQGHFLLGTLSRYAVQVAEGMGYLESK---RFIHRDLAARNLLLATRDLV 160
Query: 174 RVGDFGLARFLPPTRTQTSSID-VKGSIGYIAPEYGVGNEVSTIGDVYSYGILLLELMIR 232
++GDFGL R LP + K + APE S D + +G+ L E+
Sbjct: 161 KIGDFGLMRALPQNDDHYVMQEHRKVPFAWCAPESLKTRTFSHASDTWMFGVTLWEMFTY 220
Query: 233 EKPSDIMFEGDMNLHKFAK 251
+ I G LHK K
Sbjct: 221 GQEPWIGLNGSQILHKIDK 239
>pdb|2Z7Q|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk-1 Bound To Amp-Pcp
pdb|2Z7R|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk1 Bound To Staurosporine
pdb|2Z7S|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk1 Bound To Purvalnol A
Length = 321
Score = 45.1 bits (105), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 24/76 (31%), Positives = 41/76 (53%), Gaps = 2/76 (2%)
Query: 160 LKPSNVLLDDDMTARVGDFGLARFLPPTRTQTSSIDVKGSIGYIAPEYGVGNEVSTIGDV 219
LKP N+LLD++ ++ DFGL++ + + G++ Y+APE S D
Sbjct: 156 LKPENILLDEEGHIKLTDFGLSK--EAIDHEKKAYSFCGTVEYMAPEVVNRQGHSHSADW 213
Query: 220 YSYGILLLELMIREKP 235
+SYG+L+ E++ P
Sbjct: 214 WSYGVLMFEMLTGSLP 229
>pdb|3R21|A Chain A, Design, Synthesis, And Biological Evaluation Of
Pyrazolopyridine- Sulfonamides As Potent
Multiple-Mitotic Kinase (Mmk) Inhibitors (Part I)
pdb|3R22|A Chain A, Design, Synthesis, And Biological Evaluation Of
Pyrazolopyridine- Sulfonamides As Potent
Multiple-Mitotic Kinase (Mmk) Inhibitors (Part I)
pdb|4DHF|A Chain A, Structure Of Aurora A Mutant Bound To Biogenidec Cpd 15
pdb|4DHF|B Chain B, Structure Of Aurora A Mutant Bound To Biogenidec Cpd 15
Length = 271
Score = 45.1 bits (105), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 28/97 (28%), Positives = 48/97 (49%), Gaps = 7/97 (7%)
Query: 139 DVASALNYLHHDCQPVTAHCVLKPSNVLLDDDMTARVGDFGLARFLPPTRTQTSSIDVKG 198
++A+AL+Y H H +KP N+LL ++ DFG + P +R D+ G
Sbjct: 119 ELANALSYCHSK---RVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRD----DLCG 171
Query: 199 SIGYIAPEYGVGNEVSTIGDVYSYGILLLELMIREKP 235
++ Y+ PE G D++S G+L E ++ + P
Sbjct: 172 TLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPP 208
>pdb|2W1D|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1E|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1F|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 275
Score = 45.1 bits (105), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 28/97 (28%), Positives = 48/97 (49%), Gaps = 7/97 (7%)
Query: 139 DVASALNYLHHDCQPVTAHCVLKPSNVLLDDDMTARVGDFGLARFLPPTRTQTSSIDVKG 198
++A+AL+Y H H +KP N+LL ++ DFG + P +R T + G
Sbjct: 119 ELANALSYCHSK---RVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTT----LCG 171
Query: 199 SIGYIAPEYGVGNEVSTIGDVYSYGILLLELMIREKP 235
++ Y+ PE G D++S G+L E ++ + P
Sbjct: 172 TLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPP 208
>pdb|1ZY4|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant In Apo Form.
pdb|1ZY4|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant In Apo Form.
pdb|1ZY5|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant Complexed With Amppnp.
pdb|1ZY5|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant Complexed With Amppnp
Length = 303
Score = 44.7 bits (104), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 46/179 (25%), Positives = 81/179 (45%), Gaps = 46/179 (25%)
Query: 73 IRHRNLIKVLTAC-------LGVDYQGNDFKALVYEFMHNRSLKEWLYPISKEDETYKRP 125
+ RN +K +TA + ++Y N +Y+ +H+ +L + + DE ++
Sbjct: 72 LERRNFVKPMTAVKKKSTLFIQMEYCEN---GTLYDLIHSENLNQ------QRDEYWR-- 120
Query: 126 XXXXXXXXXXIAIDVASALNYLHHDCQPVTAHCVLKPSNVLLDDDMTARVGDFGLARF-- 183
+ + AL+Y+H Q + H LKP N+ +D+ ++GDFGLA+
Sbjct: 121 ----------LFRQILEALSYIH--SQGII-HRDLKPMNIFIDESRNVKIGDFGLAKNVH 167
Query: 184 -------LPPTRTQTSSIDVKGSIG---YIAPEY--GVGNEVSTIGDVYSYGILLLELM 230
L SS ++ +IG Y+A E G G+ I D+YS GI+ E++
Sbjct: 168 RSLDILKLDSQNLPGSSDNLTSAIGTAMYVATEVLDGTGHYNEKI-DMYSLGIIFFEMI 225
>pdb|3QFV|A Chain A, Mrck Beta In Complex With Tpca-1
pdb|3QFV|B Chain B, Mrck Beta In Complex With Tpca-1
Length = 415
Score = 44.7 bits (104), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 35/106 (33%), Positives = 52/106 (49%), Gaps = 17/106 (16%)
Query: 136 IAIDVASALNYLHHDCQPVTAHCVLKPSNVLLDDDMTARVGDFGLARFLPPTRTQTSSID 195
+AID L+Y+H D +KP NVLLD + R+ DFG + T SS+
Sbjct: 186 LAIDSIHQLHYVHRD---------IKPDNVLLDVNGHIRLADFGSCLKMNDDGTVQSSVA 236
Query: 196 VKGSIGYIAPEY------GVGNEVSTIGDVYSYGILLLELMIREKP 235
V G+ YI+PE G+G + D +S G+ + E++ E P
Sbjct: 237 V-GTPDYISPEILQAMEDGMG-KYGPECDWWSLGVCMYEMLYGETP 280
>pdb|2VWI|A Chain A, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|B Chain B, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|C Chain C, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|D Chain D, Structure Of The Osr1 Kinase, A Hypertension Drug Target
Length = 303
Score = 44.7 bits (104), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 46/186 (24%), Positives = 80/186 (43%), Gaps = 20/186 (10%)
Query: 57 QGAFKSFIAECKALRNIRHRNLIKVLTACLGVDYQGNDFKALVYEFMHNRSLKEWLYPIS 116
Q + + E +A+ H N++ T+ + D LV + + S+ + + I
Sbjct: 54 QTSMDELLKEIQAMSQCHHPNIVSYYTS-----FVVKDELWLVMKLLSGGSVLDIIKHIV 108
Query: 117 KEDETYKRPXXXXXXXXXXIAIDVASALNYLHHDCQPVTAHCVLKPSNVLLDDDMTARVG 176
+ E + I +V L YLH + Q H +K N+LL +D + ++
Sbjct: 109 AKGE--HKSGVLDESTIATILREVLEGLEYLHKNGQ---IHRDVKAGNILLGEDGSVQIA 163
Query: 177 DFGLARFLPP----TRTQTSSIDVKGSIGYIAPEYGVGNEVSTI---GDVYSYGILLLEL 229
DFG++ FL TR + V G+ ++APE V +V D++S+GI +EL
Sbjct: 164 DFGVSAFLATGGDITRNKVRKTFV-GTPCWMAPE--VMEQVRGYDFKADIWSFGITAIEL 220
Query: 230 MIREKP 235
P
Sbjct: 221 ATGAAP 226
>pdb|3PLS|A Chain A, Ron In Complex With Ligand Amp-Pnp
Length = 298
Score = 44.7 bits (104), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 46/201 (22%), Positives = 83/201 (41%), Gaps = 26/201 (12%)
Query: 41 ENLISAGTFGFSHLRRQGAFKSFIAECKALRNIRHRNLIKVLTACLGVDYQGNDFKALVY 100
+N I S + ++F+ E +R + H N++ A +G+ ++
Sbjct: 47 QNRIQCAIKSLSRITEMQQVEAFLREGLLMRGLNHPNVL----ALIGIMLPPEGLPHVLL 102
Query: 101 EFMHNRSLKEWLYPISKEDETYKRPXXXXXXXXXXIAIDVASALNYLHHDCQPVTAHCVL 160
+M + L +++ + + T K + VA + YL + H L
Sbjct: 103 PYMCHGDLLQFIRS-PQRNPTVK--------DLISFGLQVARGMEYL---AEQKFVHRDL 150
Query: 161 KPSNVLLDDDMTARVGDFGLAR------FLPPTRTQTSSIDVKGSIGYIAPEYGVGNEVS 214
N +LD+ T +V DFGLAR + + + + + VK + A E +
Sbjct: 151 AARNCMLDESFTVKVADFGLARDILDREYYSVQQHRHARLPVK----WTALESLQTYRFT 206
Query: 215 TIGDVYSYGILLLELMIREKP 235
T DV+S+G+LL EL+ R P
Sbjct: 207 TKSDVWSFGVLLWELLTRGAP 227
>pdb|3O50|A Chain A, Crystal Structure Of Benzamide 9 Bound To Auroraa
pdb|3O50|B Chain B, Crystal Structure Of Benzamide 9 Bound To Auroraa
pdb|3O51|A Chain A, Crystal Structure Of Anthranilamide 10 Bound To Auroraa
pdb|3EFW|A Chain A, Structure Of Auroraa With Pyridyl-Pyrimidine Urea
Inhibitor
pdb|3EFW|B Chain B, Structure Of Auroraa With Pyridyl-Pyrimidine Urea
Inhibitor
Length = 267
Score = 44.7 bits (104), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 30/115 (26%), Positives = 55/115 (47%), Gaps = 11/115 (9%)
Query: 139 DVASALNYLHHDCQPVTAHCVLKPSNVLLDDDMTARVGDFGLARFLPPTRTQTSSIDVKG 198
++A+AL+Y H H +KP N+LL ++ DFG + P +R T + G
Sbjct: 115 ELANALSYCHSK---RVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTT----LCG 167
Query: 199 SIGYIAPEYGVGNEVSTIGDVYSYGILLLELMIREKPSDIMFEGDMNLHKFAKMA 253
++ Y+ PE G D++S G+L E ++ + P FE + + +++
Sbjct: 168 TLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPP----FEANTYQETYKRIS 218
>pdb|3TKU|A Chain A, Mrck Beta In Complex With Fasudil
pdb|3TKU|B Chain B, Mrck Beta In Complex With Fasudil
Length = 433
Score = 44.7 bits (104), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 35/106 (33%), Positives = 52/106 (49%), Gaps = 17/106 (16%)
Query: 136 IAIDVASALNYLHHDCQPVTAHCVLKPSNVLLDDDMTARVGDFGLARFLPPTRTQTSSID 195
+AID L+Y+H D +KP NVLLD + R+ DFG + T SS+
Sbjct: 202 LAIDSIHQLHYVHRD---------IKPDNVLLDVNGHIRLADFGSCLKMNDDGTVQSSVA 252
Query: 196 VKGSIGYIAPEY------GVGNEVSTIGDVYSYGILLLELMIREKP 235
V G+ YI+PE G+G + D +S G+ + E++ E P
Sbjct: 253 V-GTPDYISPEILQAMEDGMG-KYGPECDWWSLGVCMYEMLYGETP 296
>pdb|3DAK|A Chain A, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|B Chain B, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|C Chain C, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|D Chain D, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
Length = 290
Score = 44.7 bits (104), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 46/186 (24%), Positives = 80/186 (43%), Gaps = 20/186 (10%)
Query: 57 QGAFKSFIAECKALRNIRHRNLIKVLTACLGVDYQGNDFKALVYEFMHNRSLKEWLYPIS 116
Q + + E +A+ H N++ T+ + D LV + + S+ + + I
Sbjct: 49 QTSMDELLKEIQAMSQCHHPNIVSYYTS-----FVVKDELWLVMKLLSGGSVLDIIKHIV 103
Query: 117 KEDETYKRPXXXXXXXXXXIAIDVASALNYLHHDCQPVTAHCVLKPSNVLLDDDMTARVG 176
+ E + I +V L YLH + Q H +K N+LL +D + ++
Sbjct: 104 AKGE--HKSGVLDESTIATILREVLEGLEYLHKNGQ---IHRDVKAGNILLGEDGSVQIA 158
Query: 177 DFGLARFLPP----TRTQTSSIDVKGSIGYIAPEYGVGNEVSTI---GDVYSYGILLLEL 229
DFG++ FL TR + V G+ ++APE V +V D++S+GI +EL
Sbjct: 159 DFGVSAFLATGGDITRNKVRKTFV-GTPCWMAPE--VMEQVRGYDFKADIWSFGITAIEL 215
Query: 230 MIREKP 235
P
Sbjct: 216 ATGAAP 221
>pdb|1MQ4|A Chain A, Crystal Structure Of Aurora-A Protein Kinase
pdb|2NP8|A Chain A, Structural Basis For The Inhibition Of Aurora A Kinase By
A Novel Class Of High Affinity Disubstituted Pyrimidine
Inhibitors
pdb|2X81|A Chain A, Structure Of Aurora A In Complex With Mln8054
pdb|3MYG|A Chain A, Aurora A Kinase Complexed With Sch 1473759
pdb|3VAP|A Chain A, Synthesis And Sar Studies Of Imidazo-[1,2-A]-Pyrazine
Aurora Kinase Inhibitors With Improved Off Target Kinase
Selectivity
Length = 272
Score = 44.7 bits (104), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 28/97 (28%), Positives = 48/97 (49%), Gaps = 7/97 (7%)
Query: 139 DVASALNYLHHDCQPVTAHCVLKPSNVLLDDDMTARVGDFGLARFLPPTRTQTSSIDVKG 198
++A+AL+Y H H +KP N+LL ++ DFG + P +R T + G
Sbjct: 120 ELANALSYCHSK---RVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTT----LCG 172
Query: 199 SIGYIAPEYGVGNEVSTIGDVYSYGILLLELMIREKP 235
++ Y+ PE G D++S G+L E ++ + P
Sbjct: 173 TLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPP 209
>pdb|1ZYC|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|C Chain C, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|D Chain D, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYD|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type Complexed With Atp.
pdb|1ZYD|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type Complexed With Atp
Length = 303
Score = 44.7 bits (104), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 47/174 (27%), Positives = 82/174 (47%), Gaps = 36/174 (20%)
Query: 73 IRHRNLIKVLTACLGVDYQGNDFKALVYEFMHNRSLKEWLYP--ISKEDETYKRPXXXXX 130
+ RN +K +TA V + F + E+ NR+L + ++ ++++ + Y R
Sbjct: 72 LERRNFVKPMTA---VKKKSTLFIQM--EYCENRTLYDLIHSENLNQQRDEYWR------ 120
Query: 131 XXXXXIAIDVASALNYLHHDCQPVTAHCVLKPSNVLLDDDMTARVGDFGLARF------- 183
+ + AL+Y+H Q + H LKP N+ +D+ ++GDFGLA+
Sbjct: 121 -----LFRQILEALSYIH--SQGII-HRDLKPMNIFIDESRNVKIGDFGLAKNVHRSLDI 172
Query: 184 --LPPTRTQTSSIDVKGSIG---YIAPEY--GVGNEVSTIGDVYSYGILLLELM 230
L SS ++ +IG Y+A E G G+ I D+YS GI+ E++
Sbjct: 173 LKLDSQNLPGSSDNLTSAIGTAMYVATEVLDGTGHYNEKI-DMYSLGIIFFEMI 225
>pdb|2WQE|A Chain A, Structure Of S155r Aurora-A Somatic Mutant
Length = 262
Score = 44.7 bits (104), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 28/97 (28%), Positives = 48/97 (49%), Gaps = 7/97 (7%)
Query: 139 DVASALNYLHHDCQPVTAHCVLKPSNVLLDDDMTARVGDFGLARFLPPTRTQTSSIDVKG 198
++A+AL+Y H H +KP N+LL ++ DFG + P +R T + G
Sbjct: 113 ELANALSYCHSK---RVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTT----LCG 165
Query: 199 SIGYIAPEYGVGNEVSTIGDVYSYGILLLELMIREKP 235
++ Y+ PE G D++S G+L E ++ + P
Sbjct: 166 TLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPP 202
>pdb|2OH4|A Chain A, Crystal Structure Of Vegfr2 With A Benzimidazole-Urea
Inhibitor
Length = 316
Score = 44.7 bits (104), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 47/180 (26%), Positives = 78/180 (43%), Gaps = 21/180 (11%)
Query: 61 KSFIAECKALRNIRHR-NLIKVLTACLGVDYQGNDFKALVYEFMHNRSLKEWLYPISKED 119
++ ++E K L +I H N++ +L AC G +V EF +L +L E
Sbjct: 76 RALMSELKILIHIGHHLNVVNLLGACTK---PGGPLMVIV-EFCKFGNLSTYLRSKRNEF 131
Query: 120 ETYKRPXXXXXXXXXX-----IAIDVASALNYLHHDCQPVTAHCV---LKPSNVLLDDDM 171
YK P + VA + +L + C+ L N+LL +
Sbjct: 132 VPYKTPEDLYKDFLTLEHLICYSFQVAKGMEFL------ASRKCIHRDLAARNILLSEKN 185
Query: 172 TARVGDFGLARFLPPTRTQTSSIDVKGSIGYIAPEYGVGNEVSTI-GDVYSYGILLLELM 230
++ DFGLAR + D + + ++APE + + V TI DV+S+G+LL E+
Sbjct: 186 VVKICDFGLARDIXKDPDXVRKGDARLPLKWMAPE-TIFDRVYTIQSDVWSFGVLLWEIF 244
>pdb|3DAJ|A Chain A, Crystal Structure Of Aurora A Complexed With An Inhibitor
Discovered Through Site-Directed Dynamic Tethering
Length = 272
Score = 44.7 bits (104), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 28/97 (28%), Positives = 48/97 (49%), Gaps = 7/97 (7%)
Query: 139 DVASALNYLHHDCQPVTAHCVLKPSNVLLDDDMTARVGDFGLARFLPPTRTQTSSIDVKG 198
++A+AL+Y H H +KP N+LL + ++ DFG + P +R T + G
Sbjct: 120 ELANALSYCH---SKRVIHRDIKPENLLLGSNGELKIADFGWSVHAPSSRRDT----LCG 172
Query: 199 SIGYIAPEYGVGNEVSTIGDVYSYGILLLELMIREKP 235
++ Y+ PE G D++S G+L E ++ P
Sbjct: 173 TLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGMPP 209
>pdb|2WTV|A Chain A, Aurora-A Inhibitor Structure
pdb|2WTV|B Chain B, Aurora-A Inhibitor Structure
pdb|2WTV|C Chain C, Aurora-A Inhibitor Structure
pdb|2WTV|D Chain D, Aurora-A Inhibitor Structure
Length = 285
Score = 44.3 bits (103), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 27/97 (27%), Positives = 47/97 (48%), Gaps = 7/97 (7%)
Query: 139 DVASALNYLHHDCQPVTAHCVLKPSNVLLDDDMTARVGDFGLARFLPPTRTQTSSIDVKG 198
++A+AL+Y H H +KP N+LL ++ DFG + P +R + G
Sbjct: 121 ELANALSYCHSK---RVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRXX----LXG 173
Query: 199 SIGYIAPEYGVGNEVSTIGDVYSYGILLLELMIREKP 235
++ Y+ PE G D++S G+L E ++ + P
Sbjct: 174 TLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPP 210
>pdb|3CKW|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3,
Stk24)
Length = 304
Score = 44.3 bits (103), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 30/97 (30%), Positives = 49/97 (50%), Gaps = 5/97 (5%)
Query: 139 DVASALNYLHHDCQPVTAHCVLKPSNVLLDDDMTARVGDFGLARFLPPTRTQTSSIDVKG 198
++ L+YLH + + H +K +NVLL + ++ DFG+A L T TQ G
Sbjct: 112 EILKGLDYLHSEKK---IHRDIKAANVLLSEHGEVKLADFGVAGQL--TDTQIKRNTFVG 166
Query: 199 SIGYIAPEYGVGNEVSTIGDVYSYGILLLELMIREKP 235
+ ++APE + + D++S GI +EL E P
Sbjct: 167 TPFWMAPEVIKQSAYDSKADIWSLGITAIELARGEPP 203
>pdb|2XRU|A Chain A, Aurora-A T288e Complexed With Pha-828300
Length = 280
Score = 44.3 bits (103), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 29/115 (25%), Positives = 55/115 (47%), Gaps = 11/115 (9%)
Query: 139 DVASALNYLHHDCQPVTAHCVLKPSNVLLDDDMTARVGDFGLARFLPPTRTQTSSIDVKG 198
++A+AL+Y H H +KP N+LL ++ DFG + P +R ++ G
Sbjct: 116 ELANALSYCHSK---RVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSR----RTELCG 168
Query: 199 SIGYIAPEYGVGNEVSTIGDVYSYGILLLELMIREKPSDIMFEGDMNLHKFAKMA 253
++ Y+ PE G D++S G+L E ++ + P FE + + +++
Sbjct: 169 TLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPP----FEANTYQETYKRIS 219
>pdb|3O96|A Chain A, Crystal Structure Of Human Akt1 With An Allosteric
Inhibitor
Length = 446
Score = 44.3 bits (103), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 44/172 (25%), Positives = 74/172 (43%), Gaps = 19/172 (11%)
Query: 64 IAECKALRNIRHRNLIKVLTACLGVDYQGNDFKALVYEFMHNRSLKEWLYPISKEDETYK 123
+ E + L+N RH LTA L +Q +D V E+ + L + +S+E
Sbjct: 199 LTENRVLQNSRH----PFLTA-LKYSFQTHDRLCFVMEYANGGEL---FFHLSRE----- 245
Query: 124 RPXXXXXXXXXXIAIDVASALNYLHHDCQPVTAHCVLKPSNVLLDDDMTARVGDFGLARF 183
++ SAL+YLH + V + LK N++LD D ++ DFGL +
Sbjct: 246 --RVFSEDRARFYGAEIVSALDYLHSEKNVV--YRDLKLENLMLDKDGHIKITDFGLCK- 300
Query: 184 LPPTRTQTSSIDVKGSIGYIAPEYGVGNEVSTIGDVYSYGILLLELMIREKP 235
+ + G+ Y+APE N+ D + G+++ E+M P
Sbjct: 301 -EGIKDGATMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLP 351
>pdb|4EJN|A Chain A, Crystal Structure Of Autoinhibited Form Of Akt1 In Complex
With N-(4-
(5-(3-Acetamidophenyl)-2-(2-Aminopyridin-3-Yl)-3h-
Imidazo[4,5- B]pyridin-3-Yl)benzyl)-3-Fluorobenzamide
Length = 446
Score = 44.3 bits (103), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 44/172 (25%), Positives = 74/172 (43%), Gaps = 19/172 (11%)
Query: 64 IAECKALRNIRHRNLIKVLTACLGVDYQGNDFKALVYEFMHNRSLKEWLYPISKEDETYK 123
+ E + L+N RH LTA L +Q +D V E+ + L + +S+E
Sbjct: 196 LTENRVLQNSRH----PFLTA-LKYSFQTHDRLCFVMEYANGGEL---FFHLSRE----- 242
Query: 124 RPXXXXXXXXXXIAIDVASALNYLHHDCQPVTAHCVLKPSNVLLDDDMTARVGDFGLARF 183
++ SAL+YLH + V + LK N++LD D ++ DFGL +
Sbjct: 243 --RVFSEDRARFYGAEIVSALDYLHSEKNVV--YRDLKLENLMLDKDGHIKITDFGLCK- 297
Query: 184 LPPTRTQTSSIDVKGSIGYIAPEYGVGNEVSTIGDVYSYGILLLELMIREKP 235
+ + G+ Y+APE N+ D + G+++ E+M P
Sbjct: 298 -EGIKDGATMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLP 348
>pdb|3D14|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly,
Lys240->arg, Met302- >leu) In Complex With
1-{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)- Ethyl]-
Thiazol-2-Yl}-3-(3-Trifluoromethyl-Phenyl)-Urea
pdb|3DJ5|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 290.
pdb|3DJ6|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 823.
pdb|3DJ7|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 130.
pdb|3D15|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With
1-(3-Chloro-Phenyl)-3-
{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)-
Ethyl]-Thiazol-2- Yl}-Urea [sns-314]
pdb|3D2I|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With 1-{5-[2-(1-Methyl-1h-
Pyrazolo[4,
3-D]pyrimidin-7-Ylamino)-Ethyl]-Thiazol-2-Yl}-3-
(3-Trifluoromethyl-Phenyl)-Urea
pdb|3D2K|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With
[7-(2-{2-[3-(3-Chloro-
Phenyl)-Ureido]-Thiazol-5-Yl}-Ethylamino)-Pyrazolo[4,3-
D]pyrimidin-1-Yl]-Acetic Acid
Length = 272
Score = 44.3 bits (103), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 28/97 (28%), Positives = 48/97 (49%), Gaps = 7/97 (7%)
Query: 139 DVASALNYLHHDCQPVTAHCVLKPSNVLLDDDMTARVGDFGLARFLPPTRTQTSSIDVKG 198
++A+AL+Y H H +KP N+LL + ++ DFG + P +R T + G
Sbjct: 120 ELANALSYCH---SKRVIHRDIKPENLLLGSNGELKIADFGWSVHAPSSRRTT----LCG 172
Query: 199 SIGYIAPEYGVGNEVSTIGDVYSYGILLLELMIREKP 235
++ Y+ PE G D++S G+L E ++ P
Sbjct: 173 TLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGMPP 209
>pdb|3ZGW|A Chain A, Crystal Structure Of Maternal Embryonic Leucine Zipper
Kinase (melk) In Complex With Amp-pnp
Length = 347
Score = 44.3 bits (103), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 57/225 (25%), Positives = 94/225 (41%), Gaps = 39/225 (17%)
Query: 14 KLTGSLHIEVGKLKNLEILDVSRNMLEENLISAGTFGFSHLRRQGAFKSFIAECKALRNI 73
K+ + HI G++ ++I+D +N L +L T E +AL+N+
Sbjct: 25 KVKLACHILTGEMVAIKIMD--KNTLGSDLPRIKT-----------------EIEALKNL 65
Query: 74 RHRNLIKVLTACLGVDYQGNDFKALVYEFMHNRSLKEWLYPISKEDETYKRPXXXXXXXX 133
RH+++ ++ ++ F +V E+ L +++ + E R
Sbjct: 66 RHQHICQLYHV---LETANKIF--MVLEYCPGGELFDYIISQDRLSEEETR--------- 111
Query: 134 XXIAIDVASALNYLHHDCQPVTAHCVLKPSNVLLDDDMTARVGDFGLARFLPPTRTQTSS 193
+ + SA+ Y+H AH LKP N+L D+ ++ DFGL P
Sbjct: 112 -VVFRQIVSAVAYVHSQG---YAHRDLKPENLLFDEYHKLKLIDFGLCA-KPKGNKDYHL 166
Query: 194 IDVKGSIGYIAPEYGVGNE-VSTIGDVYSYGILLLELMIREKPSD 237
GS+ Y APE G + + DV+S GILL LM P D
Sbjct: 167 QTCCGSLAYAAPELIQGKSYLGSEADVWSMGILLYVLMCGFLPFD 211
>pdb|3FME|A Chain A, Crystal Structure Of Human Mitogen-Activated Protein
Kinase Kinase 6 (Mek6) Activated Mutant (S207d, T211d)
Length = 290
Score = 44.3 bits (103), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 35/107 (32%), Positives = 55/107 (51%), Gaps = 11/107 (10%)
Query: 136 IAIDVASALNYLHHDCQPVTAHCVLKPSNVLLDDDMTARVGDFGLARFLPPTRTQTSSID 195
IA+ + AL +LH + H +KPSNVL++ ++ DFG++ +L ID
Sbjct: 114 IAVSIVKALEHLHSKLSVI--HRDVKPSNVLINALGQVKMCDFGISGYL--VDDVAKDID 169
Query: 196 VKGSIGYIAPEYGVGNEVSTIG-----DVYSYGILLLELMIREKPSD 237
G Y+APE + E++ G D++S GI ++EL I P D
Sbjct: 170 A-GCKPYMAPER-INPELNQKGYSVKSDIWSLGITMIELAILRFPYD 214
>pdb|3CKX|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3,
Stk24) In Complex With Staurosporine
Length = 304
Score = 44.3 bits (103), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 30/97 (30%), Positives = 49/97 (50%), Gaps = 5/97 (5%)
Query: 139 DVASALNYLHHDCQPVTAHCVLKPSNVLLDDDMTARVGDFGLARFLPPTRTQTSSIDVKG 198
++ L+YLH + + H +K +NVLL + ++ DFG+A L T TQ G
Sbjct: 112 EILKGLDYLHSEKK---IHRDIKAANVLLSEHGEVKLADFGVAGQL--TDTQIKRNXFVG 166
Query: 199 SIGYIAPEYGVGNEVSTIGDVYSYGILLLELMIREKP 235
+ ++APE + + D++S GI +EL E P
Sbjct: 167 TPFWMAPEVIKQSAYDSKADIWSLGITAIELARGEPP 203
>pdb|3A7F|A Chain A, Human Mst3 Kinase
pdb|3A7G|A Chain A, Human Mst3 Kinase
pdb|3A7G|B Chain B, Human Mst3 Kinase
pdb|3A7H|A Chain A, Human Mst3 Kinase In Complex With Atp
pdb|3A7H|B Chain B, Human Mst3 Kinase In Complex With Atp
pdb|3A7I|A Chain A, Human Mst3 Kinase In Complex With Adenine
pdb|3A7J|A Chain A, Human Mst3 Kinase In Complex With Mnadp
Length = 303
Score = 44.3 bits (103), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 30/97 (30%), Positives = 49/97 (50%), Gaps = 5/97 (5%)
Query: 139 DVASALNYLHHDCQPVTAHCVLKPSNVLLDDDMTARVGDFGLARFLPPTRTQTSSIDVKG 198
++ L+YLH + + H +K +NVLL + ++ DFG+A L T TQ G
Sbjct: 127 EILKGLDYLHSEKK---IHRDIKAANVLLSEHGEVKLADFGVAGQL--TDTQIKRNXFVG 181
Query: 199 SIGYIAPEYGVGNEVSTIGDVYSYGILLLELMIREKP 235
+ ++APE + + D++S GI +EL E P
Sbjct: 182 TPFWMAPEVIKQSAYDSKADIWSLGITAIELARGEPP 218
>pdb|2I0V|A Chain A, C-Fms Tyrosine Kinase In Complex With A Quinolone
Inhibitor
pdb|2I0Y|A Chain A, Cfms Tyrosine Kinase (Fgf Kid) In Complex With An
Arylamide Inhibitor
pdb|3DPK|A Chain A, Cfms Tyrosine Kinase In Complex With A Pyridopyrimidinone
Inhibitor
pdb|3KRJ|A Chain A, Cfms Tyrosine Kinase In Complex With
4-Cyano-1h-Imidazole-2-Carboxylic Acid
(2-Cyclohex-1-Enyl-4-Piperidin-4-Yl-Phenyl)-Amide
pdb|3KRL|A Chain A, Cfms Tyrosine Kinase In Complex With
5-Cyano-Furan-2-Carboxylic Acid
[4-(4-Methyl-Piperazin-1-Yl)-2-Piperidin-1-Yl-Phenyl]-
Amide
Length = 335
Score = 44.3 bits (103), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 28/71 (39%), Positives = 40/71 (56%), Gaps = 8/71 (11%)
Query: 164 NVLLDDDMTARVGDFGLARFLPPTRTQTSSIDVKGS----IGYIAPEYGVGNEVSTIGDV 219
NVLL + A++GDFGLAR + S+ VKG+ + ++APE + DV
Sbjct: 196 NVLLTNGHVAKIGDFGLARDI----MNDSNYIVKGNARLPVKWMAPESIFDCVYTVQSDV 251
Query: 220 YSYGILLLELM 230
+SYGILL E+
Sbjct: 252 WSYGILLWEIF 262
>pdb|2OGV|A Chain A, Crystal Structure Of The Autoinhibited Human C-Fms Kinase
Domain
Length = 317
Score = 44.3 bits (103), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 24/67 (35%), Positives = 36/67 (53%)
Query: 164 NVLLDDDMTARVGDFGLARFLPPTRTQTSSIDVKGSIGYIAPEYGVGNEVSTIGDVYSYG 223
NVLL + A++GDFGLAR + + + + ++APE + DV+SYG
Sbjct: 182 NVLLTNGHVAKIGDFGLARDIMNDSNYIVKGNARLPVKWMAPESIFDCVYTVQSDVWSYG 241
Query: 224 ILLLELM 230
ILL E+
Sbjct: 242 ILLWEIF 248
>pdb|3LCD|A Chain A, Inhibitor Bound To A Dfg-In Structure Of The Kinase Domain
Of Csf-1r
Length = 329
Score = 44.3 bits (103), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 24/67 (35%), Positives = 36/67 (53%)
Query: 164 NVLLDDDMTARVGDFGLARFLPPTRTQTSSIDVKGSIGYIAPEYGVGNEVSTIGDVYSYG 223
NVLL + A++GDFGLAR + + + + ++APE + DV+SYG
Sbjct: 190 NVLLTNGHVAKIGDFGLARDIMNDSNYIVKGNARLPVKWMAPESIFDCVYTVQSDVWSYG 249
Query: 224 ILLLELM 230
ILL E+
Sbjct: 250 ILLWEIF 256
>pdb|2VRX|A Chain A, Structure Of Aurora B Kinase In Complex With Zm447439
pdb|2VRX|B Chain B, Structure Of Aurora B Kinase In Complex With Zm447439
Length = 285
Score = 44.3 bits (103), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 52/249 (20%), Positives = 96/249 (38%), Gaps = 36/249 (14%)
Query: 52 SHLRRQGAFKSFIAECKALRNIRHRNLIKVLTACLGVDYQGNDFKALVYEFMHNRSLKEW 111
S L ++G E + ++RH N++++ Y + H+R
Sbjct: 51 SQLEKEGVEHQLRREIEIQSHLRHPNILRM------------------YNYFHDRKRIYL 92
Query: 112 LYPISKEDETYKRPXXXXXXXXXXIAI---DVASALNYLHHDCQPVTAHCVLKPSNVLLD 168
+ + E YK A ++A AL+Y H + H +KP N+L+
Sbjct: 93 MLEFAPRGELYKELQKHGRFDEQRSATFMEELADALHYCH---ERKVIHRDIKPENLLMG 149
Query: 169 DDMTARVGDFGLARFLPPTRTQTSSIDVKGSIGYIAPEYGVGNEVSTIGDVYSYGILLLE 228
++ DFG + P R + G++ Y+ PE G D++ G+L E
Sbjct: 150 YKGELKIADFGWSVHAPSLRRRXMC----GTLDYLPPEMIEGKTHDEKVDLWCAGVLCYE 205
Query: 229 LMIREKPSDIMFEGDMNLH------KFAKMALSNHVKDIVDSIL-LNDDEKLVVRGDQKQ 281
++ P D + + KF LS+ KD++ +L + ++L ++G +
Sbjct: 206 FLVGMPPFDSPSHTETHRRIVNVDLKFPPF-LSDGSKDLISKLLRYHPPQRLPLKGVMEH 264
Query: 282 TQAKINIIR 290
K N R
Sbjct: 265 PWVKANSRR 273
>pdb|3BEA|A Chain A, Cfms Tyrosine Kinase (Tie2 Kid) In Complex With A
Pyrimidinopyridone Inhibitor
Length = 333
Score = 44.3 bits (103), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 28/71 (39%), Positives = 40/71 (56%), Gaps = 8/71 (11%)
Query: 164 NVLLDDDMTARVGDFGLARFLPPTRTQTSSIDVKGS----IGYIAPEYGVGNEVSTIGDV 219
NVLL + A++GDFGLAR + S+ VKG+ + ++APE + DV
Sbjct: 194 NVLLTNGHVAKIGDFGLARDI----MNDSNYIVKGNARLPVKWMAPESIFDCVYTVQSDV 249
Query: 220 YSYGILLLELM 230
+SYGILL E+
Sbjct: 250 WSYGILLWEIF 260
>pdb|2BFX|A Chain A, Mechanism Of Aurora-B Activation By Incenp And Inhibition
By Hesperidin.
pdb|2BFX|B Chain B, Mechanism Of Aurora-B Activation By Incenp And Inhibition
By Hesperidin.
pdb|2VGP|A Chain A, Crystal Structure Of Aurora B Kinase In Complex With A
Aminothiazole Inhibitor
pdb|2VGP|B Chain B, Crystal Structure Of Aurora B Kinase In Complex With A
Aminothiazole Inhibitor
pdb|2VGO|A Chain A, Crystal Structure Of Aurora B Kinase In Complex With
Reversine Inhibitor
pdb|2VGO|B Chain B, Crystal Structure Of Aurora B Kinase In Complex With
Reversine Inhibitor
pdb|3ZTX|A Chain A, Aurora Kinase Selective Inhibitors Identified Using A
Taxol- Induced Checkpoint Sensitivity Screen.
pdb|3ZTX|B Chain B, Aurora Kinase Selective Inhibitors Identified Using A
Taxol- Induced Checkpoint Sensitivity Screen
Length = 284
Score = 44.3 bits (103), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 52/249 (20%), Positives = 96/249 (38%), Gaps = 36/249 (14%)
Query: 52 SHLRRQGAFKSFIAECKALRNIRHRNLIKVLTACLGVDYQGNDFKALVYEFMHNRSLKEW 111
S L ++G E + ++RH N++++ Y + H+R
Sbjct: 50 SQLEKEGVEHQLRREIEIQSHLRHPNILRM------------------YNYFHDRKRIYL 91
Query: 112 LYPISKEDETYKRPXXXXXXXXXXIAI---DVASALNYLHHDCQPVTAHCVLKPSNVLLD 168
+ + E YK A ++A AL+Y H + H +KP N+L+
Sbjct: 92 MLEFAPRGELYKELQKHGRFDEQRSATFMEELADALHYCH---ERKVIHRDIKPENLLMG 148
Query: 169 DDMTARVGDFGLARFLPPTRTQTSSIDVKGSIGYIAPEYGVGNEVSTIGDVYSYGILLLE 228
++ DFG + P R + G++ Y+ PE G D++ G+L E
Sbjct: 149 YKGELKIADFGWSVHAPSLRRRXMC----GTLDYLPPEMIEGKTHDEKVDLWCAGVLCYE 204
Query: 229 LMIREKPSDIMFEGDMNLH------KFAKMALSNHVKDIVDSIL-LNDDEKLVVRGDQKQ 281
++ P D + + KF LS+ KD++ +L + ++L ++G +
Sbjct: 205 FLVGMPPFDSPSHTETHRRIVNVDLKFPPF-LSDGSKDLISKLLRYHPPQRLPLKGVMEH 263
Query: 282 TQAKINIIR 290
K N R
Sbjct: 264 PWVKANSRR 272
>pdb|2BFY|A Chain A, Complex Of Aurora-B With Incenp And Hesperidin.
pdb|2BFY|B Chain B, Complex Of Aurora-B With Incenp And Hesperidin
Length = 284
Score = 43.9 bits (102), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 52/249 (20%), Positives = 96/249 (38%), Gaps = 36/249 (14%)
Query: 52 SHLRRQGAFKSFIAECKALRNIRHRNLIKVLTACLGVDYQGNDFKALVYEFMHNRSLKEW 111
S L ++G E + ++RH N++++ Y + H+R
Sbjct: 50 SQLEKEGVEHQLRREIEIQSHLRHPNILRM------------------YNYFHDRKRIYL 91
Query: 112 LYPISKEDETYKRPXXXXXXXXXXIAI---DVASALNYLHHDCQPVTAHCVLKPSNVLLD 168
+ + E YK A ++A AL+Y H + H +KP N+L+
Sbjct: 92 MLEFAPRGELYKELQKHGRFDEQRSATFMEELADALHYCH---ERKVIHRDIKPENLLMG 148
Query: 169 DDMTARVGDFGLARFLPPTRTQTSSIDVKGSIGYIAPEYGVGNEVSTIGDVYSYGILLLE 228
++ DFG + P R + G++ Y+ PE G D++ G+L E
Sbjct: 149 YKGELKIADFGWSVHAPSLRRRXMC----GTLDYLPPEMIEGKTHDEKVDLWCAGVLCYE 204
Query: 229 LMIREKPSDIMFEGDMNLH------KFAKMALSNHVKDIVDSIL-LNDDEKLVVRGDQKQ 281
++ P D + + KF LS+ KD++ +L + ++L ++G +
Sbjct: 205 FLVGMPPFDSPSHTETHRRIVNVDLKFPPF-LSDGSKDLISKLLRYHPPQRLPLKGVMEH 263
Query: 282 TQAKINIIR 290
K N R
Sbjct: 264 PWVKANSRR 272
>pdb|3ZHP|C Chain C, Human Mst3 (stk24) In Complex With Mo25beta
pdb|3ZHP|D Chain D, Human Mst3 (stk24) In Complex With Mo25beta
Length = 294
Score = 43.9 bits (102), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 30/97 (30%), Positives = 49/97 (50%), Gaps = 5/97 (5%)
Query: 139 DVASALNYLHHDCQPVTAHCVLKPSNVLLDDDMTARVGDFGLARFLPPTRTQTSSIDVKG 198
++ L+YLH + + H +K +NVLL + ++ DFG+A L T TQ G
Sbjct: 132 EILKGLDYLHSEKK---IHRDIKAANVLLSEHGEVKLADFGVAGQL--TDTQIKRNTFVG 186
Query: 199 SIGYIAPEYGVGNEVSTIGDVYSYGILLLELMIREKP 235
+ ++APE + + D++S GI +EL E P
Sbjct: 187 TPFWMAPEVIKQSAYDSKADIWSLGITAIELARGEPP 223
>pdb|3KMU|A Chain A, Crystal Structure Of The IlkALPHA-Parvin Core Complex
(Apo)
Length = 271
Score = 43.9 bits (102), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 45/179 (25%), Positives = 68/179 (37%), Gaps = 24/179 (13%)
Query: 61 KSFIAECKALRNIRHRNLIKVLTACLGVDYQGNDFKALVYEFMHNRSLKEWLYPISKEDE 120
+ F EC LR H N++ VL AC L+ + SL Y + E
Sbjct: 52 RDFNEECPRLRIFSHPNVLPVLGACQS---PPAPHPTLITHWXPYGSL----YNVLHEGT 104
Query: 121 TYKRPXXXXXXXXXXIAIDVASALNYLHHDCQPVTAHCVLKPSNVLLDDDMTARVGDFGL 180
+ A+D A +LH +P+ L +V +D+D TAR+ +
Sbjct: 105 NF----VVDQSQAVKFALDXARGXAFLH-TLEPLIPRHALNSRSVXIDEDXTARISXADV 159
Query: 181 A-RFLPPTRTQTSSIDVKGSIGYIAPEYGVGNEVST---IGDVYSYGILLLELMIREKP 235
F P R + ++APE T D +S+ +LL EL+ RE P
Sbjct: 160 KFSFQSPGRXYAPA--------WVAPEALQKKPEDTNRRSADXWSFAVLLWELVTREVP 210
>pdb|2HAK|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|C Chain C, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|D Chain D, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|E Chain E, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|F Chain F, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|G Chain G, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|H Chain H, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
Length = 328
Score = 43.9 bits (102), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 34/100 (34%), Positives = 47/100 (47%), Gaps = 9/100 (9%)
Query: 140 VASALNYLHHDCQPVTAHCVLKPSNVLLDDDMTARVGDFGLARFLPPTRTQTSSIDVK-G 198
+ SA+ Y H Q H LK N+LLD DM ++ DFG + T + +D G
Sbjct: 123 IVSAVQYCH---QKYIVHRDLKAENLLLDGDMNIKIADFGFSNEF----TVGNKLDTFCG 175
Query: 199 SIGYIAPEYGVGNEVSTIG-DVYSYGILLLELMIREKPSD 237
S Y APE G + DV+S G++L L+ P D
Sbjct: 176 SPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFD 215
>pdb|3LCO|A Chain A, Inhibitor Bound To A Dfg-Out Structure Of The Kinase
Domain Of Csf-1r
Length = 324
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 28/71 (39%), Positives = 40/71 (56%), Gaps = 8/71 (11%)
Query: 164 NVLLDDDMTARVGDFGLARFLPPTRTQTSSIDVKGS----IGYIAPEYGVGNEVSTIGDV 219
NVLL + A++GDFGLAR + S+ VKG+ + ++APE + DV
Sbjct: 188 NVLLTNGHVAKIGDFGLARDI----MNDSNYIVKGNARLPVKWMAPESIFDCVYTVQSDV 243
Query: 220 YSYGILLLELM 230
+SYGILL E+
Sbjct: 244 WSYGILLWEIF 254
>pdb|3IEC|A Chain A, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|B Chain B, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|C Chain C, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|D Chain D, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
Length = 319
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 34/100 (34%), Positives = 47/100 (47%), Gaps = 9/100 (9%)
Query: 140 VASALNYLHHDCQPVTAHCVLKPSNVLLDDDMTARVGDFGLARFLPPTRTQTSSIDVK-G 198
+ SA+ Y H Q H LK N+LLD DM ++ DFG + T + +D G
Sbjct: 115 IVSAVQYCH---QKFIVHRDLKAENLLLDADMNIKIADFGFSNEF----TFGNKLDTFCG 167
Query: 199 SIGYIAPEYGVGNEVSTIG-DVYSYGILLLELMIREKPSD 237
S Y APE G + DV+S G++L L+ P D
Sbjct: 168 SPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFD 207
>pdb|4GV1|A Chain A, Pkb Alpha In Complex With Azd5363
Length = 340
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 44/172 (25%), Positives = 74/172 (43%), Gaps = 19/172 (11%)
Query: 64 IAECKALRNIRHRNLIKVLTACLGVDYQGNDFKALVYEFMHNRSLKEWLYPISKEDETYK 123
+ E + L+N RH LTA L +Q +D V E+ + L + +S+E
Sbjct: 56 LTENRVLQNSRH----PFLTA-LKYSFQTHDRLCFVMEYANGGEL---FFHLSRE----- 102
Query: 124 RPXXXXXXXXXXIAIDVASALNYLHHDCQPVTAHCVLKPSNVLLDDDMTARVGDFGLARF 183
++ SAL+YLH + V + LK N++LD D ++ DFGL +
Sbjct: 103 --RVFSEDRARFYGAEIVSALDYLHSEKNVV--YRDLKLENLMLDKDGHIKITDFGLCK- 157
Query: 184 LPPTRTQTSSIDVKGSIGYIAPEYGVGNEVSTIGDVYSYGILLLELMIREKP 235
+ + G+ Y+APE N+ D + G+++ E+M P
Sbjct: 158 -EGIKDGATMKXFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLP 208
>pdb|3UBD|A Chain A, Structure Of N-Terminal Domain Of Rsk2 Kinase In Complex
With Flavonoid Glycoside Sl0101
Length = 304
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 27/97 (27%), Positives = 51/97 (52%), Gaps = 5/97 (5%)
Query: 139 DVASALNYLHHDCQPVTAHCVLKPSNVLLDDDMTARVGDFGLARFLPPTRTQTSSIDVKG 198
++A AL++LH + LKP N+LLD++ ++ DFGL++ + + G
Sbjct: 134 ELALALDHLHSLG---IIYRDLKPENILLDEEGHIKLTDFGLSK--ESIDHEKKAYSFCG 188
Query: 199 SIGYIAPEYGVGNEVSTIGDVYSYGILLLELMIREKP 235
++ Y+APE + D +S+G+L+ E++ P
Sbjct: 189 TVEYMAPEVVNRRGHTQSADWWSFGVLMFEMLTGTLP 225
>pdb|4EL9|A Chain A, Structure Of N-Terminal Kinase Domain Of Rsk2 With Afzelin
pdb|4GUE|A Chain A, Structure Of N-terminal Kinase Domain Of Rsk2 With
Flavonoid Glycoside Quercitrin
Length = 305
Score = 43.5 bits (101), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 27/97 (27%), Positives = 51/97 (52%), Gaps = 5/97 (5%)
Query: 139 DVASALNYLHHDCQPVTAHCVLKPSNVLLDDDMTARVGDFGLARFLPPTRTQTSSIDVKG 198
++A AL++LH + LKP N+LLD++ ++ DFGL++ + + G
Sbjct: 135 ELALALDHLHSLG---IIYRDLKPENILLDEEGHIKLTDFGLSK--ESIDHEKKAYSFCG 189
Query: 199 SIGYIAPEYGVGNEVSTIGDVYSYGILLLELMIREKP 235
++ Y+APE + D +S+G+L+ E++ P
Sbjct: 190 TVEYMAPEVVNRRGHTQSADWWSFGVLMFEMLTGTLP 226
>pdb|1OL6|A Chain A, Structure Of Unphosphorylated D274n Mutant Of Aurora-a
Length = 282
Score = 43.5 bits (101), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 29/115 (25%), Positives = 55/115 (47%), Gaps = 11/115 (9%)
Query: 139 DVASALNYLHHDCQPVTAHCVLKPSNVLLDDDMTARVGDFGLARFLPPTRTQTSSIDVKG 198
++A+AL+Y H H +KP N+LL ++ +FG + P +R T + G
Sbjct: 118 ELANALSYCHSK---RVIHRDIKPENLLLGSAGELKIANFGWSVHAPSSRRTT----LCG 170
Query: 199 SIGYIAPEYGVGNEVSTIGDVYSYGILLLELMIREKPSDIMFEGDMNLHKFAKMA 253
++ Y+ PE G D++S G+L E ++ + P FE + + +++
Sbjct: 171 TLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPP----FEANTYQETYKRIS 221
>pdb|1ZMV|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
K82r Mutant
pdb|1ZMV|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
K82r Mutant
Length = 327
Score = 43.5 bits (101), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 34/100 (34%), Positives = 47/100 (47%), Gaps = 9/100 (9%)
Query: 140 VASALNYLHHDCQPVTAHCVLKPSNVLLDDDMTARVGDFGLARFLPPTRTQTSSIDVK-G 198
+ SA+ Y H Q H LK N+LLD DM ++ DFG + T + +D G
Sbjct: 122 IVSAVQYCH---QKFIVHRDLKAENLLLDADMNIKIADFGFSNEF----TFGNKLDTFCG 174
Query: 199 SIGYIAPEYGVGNEVSTIG-DVYSYGILLLELMIREKPSD 237
S Y APE G + DV+S G++L L+ P D
Sbjct: 175 SPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFD 214
>pdb|1ZMU|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Wild Type
pdb|1ZMU|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Wild Type
Length = 327
Score = 43.5 bits (101), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 34/100 (34%), Positives = 47/100 (47%), Gaps = 9/100 (9%)
Query: 140 VASALNYLHHDCQPVTAHCVLKPSNVLLDDDMTARVGDFGLARFLPPTRTQTSSIDVK-G 198
+ SA+ Y H Q H LK N+LLD DM ++ DFG + T + +D G
Sbjct: 122 IVSAVQYCH---QKFIVHRDLKAENLLLDADMNIKIADFGFSNEF----TFGNKLDTFCG 174
Query: 199 SIGYIAPEYGVGNEVSTIG-DVYSYGILLLELMIREKPSD 237
S Y APE G + DV+S G++L L+ P D
Sbjct: 175 SPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFD 214
>pdb|3OCB|A Chain A, Akt1 Kinase Domain With Pyrrolopyrimidine Inhibitor
pdb|3OCB|B Chain B, Akt1 Kinase Domain With Pyrrolopyrimidine Inhibitor
pdb|3OW4|A Chain A, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|3OW4|B Chain B, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|3QKK|A Chain A, Spirochromane Akt Inhibitors
pdb|3QKL|A Chain A, Spirochromane Akt Inhibitors
pdb|3QKM|A Chain A, Spirocyclic Sulfonamides As Akt Inhibitors
pdb|4EKK|A Chain A, Akt1 With Amp-Pnp
pdb|4EKK|B Chain B, Akt1 With Amp-Pnp
pdb|4EKL|A Chain A, Akt1 With Gdc0068
Length = 341
Score = 43.5 bits (101), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 44/172 (25%), Positives = 74/172 (43%), Gaps = 19/172 (11%)
Query: 64 IAECKALRNIRHRNLIKVLTACLGVDYQGNDFKALVYEFMHNRSLKEWLYPISKEDETYK 123
+ E + L+N RH LTA L +Q +D V E+ + L + +S+E
Sbjct: 57 LTENRVLQNSRH----PFLTA-LKYSFQTHDRLCFVMEYANGGEL---FFHLSRE----- 103
Query: 124 RPXXXXXXXXXXIAIDVASALNYLHHDCQPVTAHCVLKPSNVLLDDDMTARVGDFGLARF 183
++ SAL+YLH + V + LK N++LD D ++ DFGL +
Sbjct: 104 --RVFSEDRARFYGAEIVSALDYLHSEKNVV--YRDLKLENLMLDKDGHIKITDFGLCK- 158
Query: 184 LPPTRTQTSSIDVKGSIGYIAPEYGVGNEVSTIGDVYSYGILLLELMIREKP 235
+ + G+ Y+APE N+ D + G+++ E+M P
Sbjct: 159 -EGIKDGATMKXFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLP 209
>pdb|3CQU|A Chain A, Crystal Structure Of Akt-1 Complexed With Substrate
Peptide And Inhibitor
pdb|3CQW|A Chain A, Crystal Structure Of Akt-1 Complexed With Substrate
Peptide And Inhibitor
pdb|3MV5|A Chain A, Crystal Structure Of Akt-1-Inhibitor Complexes
pdb|3MVH|A Chain A, Crystal Structure Of Akt-1-Inhibitor Complexes
Length = 342
Score = 43.5 bits (101), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 44/172 (25%), Positives = 74/172 (43%), Gaps = 19/172 (11%)
Query: 64 IAECKALRNIRHRNLIKVLTACLGVDYQGNDFKALVYEFMHNRSLKEWLYPISKEDETYK 123
+ E + L+N RH LTA L +Q +D V E+ + L + +S+E
Sbjct: 58 LTENRVLQNSRH----PFLTA-LKYSFQTHDRLCFVMEYANGGEL---FFHLSRE----- 104
Query: 124 RPXXXXXXXXXXIAIDVASALNYLHHDCQPVTAHCVLKPSNVLLDDDMTARVGDFGLARF 183
++ SAL+YLH + V + LK N++LD D ++ DFGL +
Sbjct: 105 --RVFSEDRARFYGAEIVSALDYLHSEKNVV--YRDLKLENLMLDKDGHIKITDFGLCK- 159
Query: 184 LPPTRTQTSSIDVKGSIGYIAPEYGVGNEVSTIGDVYSYGILLLELMIREKP 235
+ + G+ Y+APE N+ D + G+++ E+M P
Sbjct: 160 -EGIKDGATMKXFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLP 210
>pdb|2R0I|A Chain A, Crystal Structure Of A Kinase Mark2PAR-1 Mutant
pdb|2R0I|B Chain B, Crystal Structure Of A Kinase Mark2PAR-1 Mutant
Length = 327
Score = 43.5 bits (101), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 34/100 (34%), Positives = 47/100 (47%), Gaps = 9/100 (9%)
Query: 140 VASALNYLHHDCQPVTAHCVLKPSNVLLDDDMTARVGDFGLARFLPPTRTQTSSIDVK-G 198
+ SA+ Y H Q H LK N+LLD DM ++ DFG + T + +D G
Sbjct: 122 IVSAVQYCH---QKFIVHRDLKAENLLLDADMNIKIADFGFSNEF----TFGNKLDTFCG 174
Query: 199 SIGYIAPEYGVGNEVSTIG-DVYSYGILLLELMIREKPSD 237
S Y APE G + DV+S G++L L+ P D
Sbjct: 175 SPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFD 214
>pdb|3KN5|A Chain A, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
In With Amp-Pnp
pdb|3KN5|B Chain B, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
In With Amp-Pnp
pdb|3KN6|A Chain A, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
pdb|3KN6|B Chain B, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
Length = 325
Score = 43.5 bits (101), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 42/158 (26%), Positives = 68/158 (43%), Gaps = 36/158 (22%)
Query: 140 VASALNYLHHDCQPVTAHCVLKPSNVLL---DDDMTARVGDFGLARFLPPTRTQTSSIDV 196
+ SA++++H D V H LKP N+L +D++ ++ DFG AR PP +
Sbjct: 115 LVSAVSHMH-DVGVV--HRDLKPENLLFTDENDNLEIKIIDFGFARLKPPDNQPLKTPCF 171
Query: 197 KGSIGYIAPEYGVGNEVSTIGDVYSYGILL----------------------LELMIREK 234
++ Y APE N D++S G++L +E+M + K
Sbjct: 172 --TLHYAAPELLNQNGYDESCDLWSLGVILYTMLSGQVPFQSHDRSLTCTSAVEIMKKIK 229
Query: 235 PSDIMFEGDMNLHKFAKMALSNHVKDIVDSILLNDDEK 272
D FEG+ A +S KD++ +L D K
Sbjct: 230 KGDFSFEGE------AWKNVSQEAKDLIQGLLTVDPNK 261
>pdb|1OL5|A Chain A, Structure Of Aurora-A 122-403, Phosphorylated On Thr287,
Thr288 And Bound To Tpx2 1-43
pdb|1OL7|A Chain A, Structure Of Human Aurora-A 122-403 Phosphorylated On
Thr287, Thr288
Length = 282
Score = 43.5 bits (101), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 29/115 (25%), Positives = 54/115 (46%), Gaps = 11/115 (9%)
Query: 139 DVASALNYLHHDCQPVTAHCVLKPSNVLLDDDMTARVGDFGLARFLPPTRTQTSSIDVKG 198
++A+AL+Y H H +KP N+LL ++ DFG + P +R + G
Sbjct: 118 ELANALSYCHSK---RVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRXX----LCG 170
Query: 199 SIGYIAPEYGVGNEVSTIGDVYSYGILLLELMIREKPSDIMFEGDMNLHKFAKMA 253
++ Y+ PE G D++S G+L E ++ + P FE + + +++
Sbjct: 171 TLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPP----FEANTYQETYKRIS 221
>pdb|3G51|A Chain A, Structural Diversity Of The Active Conformation Of The N-
Terminal Kinase Domain Of P90 Ribosomal S6 Kinase 2
Length = 325
Score = 43.1 bits (100), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 27/97 (27%), Positives = 51/97 (52%), Gaps = 5/97 (5%)
Query: 139 DVASALNYLHHDCQPVTAHCVLKPSNVLLDDDMTARVGDFGLARFLPPTRTQTSSIDVKG 198
++A AL++LH + LKP N+LLD++ ++ DFGL++ + + G
Sbjct: 134 ELALALDHLHSLG---IIYRDLKPENILLDEEGHIKLTDFGLSK--ESIDHEKKAYSFCG 188
Query: 199 SIGYIAPEYGVGNEVSTIGDVYSYGILLLELMIREKP 235
++ Y+APE + D +S+G+L+ E++ P
Sbjct: 189 TVEYMAPEVVNRRGHTQSADWWSFGVLMFEMLTGTLP 225
>pdb|4FST|A Chain A, Crystal Structure Of The Chk1
Length = 269
Score = 43.1 bits (100), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 27/83 (32%), Positives = 42/83 (50%), Gaps = 1/83 (1%)
Query: 156 AHCVLKPSNVLLDDDMTARVGDFGLARFLPPTRTQTSSIDVKGSIGYIAPEYGVGNEV-S 214
H +KP N+LLD+ ++ DFGLA + + G++ Y+APE E +
Sbjct: 126 THRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGTLPYVAPELLKRREFHA 185
Query: 215 TIGDVYSYGILLLELMIREKPSD 237
DV+S GI+L ++ E P D
Sbjct: 186 EPVDVWSCGIVLTAMLAGELPWD 208
>pdb|2XIK|A Chain A, Structure Of Human Ysk1 (Yeast Sps1-Ste20-Related Kinase
1)
Length = 294
Score = 43.1 bits (100), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 30/98 (30%), Positives = 49/98 (50%), Gaps = 5/98 (5%)
Query: 139 DVASALNYLHHDCQPVTAHCVLKPSNVLLDDDMTARVGDFGLARFLPPTRTQTSSIDVKG 198
++ L+YLH + + H +K +NVLL + ++ DFG+A L T TQ G
Sbjct: 124 EILKGLDYLHSERK---IHRDIKAANVLLSEQGDVKLADFGVAGQL--TDTQIKRNXFVG 178
Query: 199 SIGYIAPEYGVGNEVSTIGDVYSYGILLLELMIREKPS 236
+ ++APE + D++S GI +EL E P+
Sbjct: 179 TPFWMAPEVIKQSAYDFKADIWSLGITAIELAKGEPPN 216
>pdb|4FG9|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-320 In Complex With Atp
pdb|4FG9|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-320 In Complex With Atp
pdb|4FGB|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I Apo Form
Length = 320
Score = 43.1 bits (100), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 33/99 (33%), Positives = 48/99 (48%), Gaps = 9/99 (9%)
Query: 140 VASALNYLHHDCQPVTAHCVLKPSNVL---LDDDMTARVGDFGLARFLPPTRTQTSSIDV 196
V A+ YLH D V H LKP N+L LD+D + DFGL++ P +++
Sbjct: 125 VLDAVKYLH-DLGIV--HRDLKPENLLYYSLDEDSKIMISDFGLSKMEDPGSVLSTAC-- 179
Query: 197 KGSIGYIAPEYGVGNEVSTIGDVYSYGILLLELMIREKP 235
G+ GY+APE S D +S G++ L+ P
Sbjct: 180 -GTPGYVAPEVLAQKPYSKAVDCWSIGVIAYILLCGYPP 217
>pdb|3COK|A Chain A, Crystal Structure Of Plk4 Kinase
pdb|3COK|B Chain B, Crystal Structure Of Plk4 Kinase
Length = 278
Score = 43.1 bits (100), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 41/154 (26%), Positives = 65/154 (42%), Gaps = 26/154 (16%)
Query: 90 YQGNDFKALVYEFMHN----RSLKEWLYPISKEDETYKRPXXXXXXXXXXIAIDVASALN 145
++ +++ LV E HN R LK + P S+ + + + + +
Sbjct: 80 FEDSNYVYLVLEMCHNGEMNRYLKNRVKPFSENEARH-------------FMHQIITGML 126
Query: 146 YLHHDCQPVTAHCVLKPSNVLLDDDMTARVGDFGLARFL--PPTRTQTSSIDVKGSIGYI 203
YLH H L SN+LL +M ++ DFGLA L P + T + G+ YI
Sbjct: 127 YLHSHG---ILHRDLTLSNLLLTRNMNIKIADFGLATQLKMPHEKHYT----LCGTPNYI 179
Query: 204 APEYGVGNEVSTIGDVYSYGILLLELMIREKPSD 237
+PE + DV+S G + L+I P D
Sbjct: 180 SPEIATRSAHGLESDVWSLGCMFYTLLIGRPPFD 213
>pdb|4FSW|A Chain A, Crystal Structure Of The Chk1
pdb|4FTA|A Chain A, Crystal Structure Of The Chk1
pdb|4FTC|A Chain A, Crystal Structure Of The Chk1
pdb|4FTN|A Chain A, Crystal Structure Of The Chk1
pdb|4FTQ|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 43.1 bits (100), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 27/83 (32%), Positives = 42/83 (50%), Gaps = 1/83 (1%)
Query: 156 AHCVLKPSNVLLDDDMTARVGDFGLARFLPPTRTQTSSIDVKGSIGYIAPEYGVGNEV-S 214
H +KP N+LLD+ ++ DFGLA + + G++ Y+APE E +
Sbjct: 126 THRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGTLPYVAPELLKRREFHA 185
Query: 215 TIGDVYSYGILLLELMIREKPSD 237
DV+S GI+L ++ E P D
Sbjct: 186 EPVDVWSCGIVLTAMLAGELPWD 208
>pdb|3NRM|A Chain A, Imidazo[1,2-A]pyrazine-Based Aurora Kinase Inhibitors
Length = 283
Score = 43.1 bits (100), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 27/97 (27%), Positives = 47/97 (48%), Gaps = 7/97 (7%)
Query: 139 DVASALNYLHHDCQPVTAHCVLKPSNVLLDDDMTARVGDFGLARFLPPTRTQTSSIDVKG 198
++A+AL+Y H H +KP N+LL ++ DFG + P +R + G
Sbjct: 119 ELANALSYCHSK---RVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRAA----LCG 171
Query: 199 SIGYIAPEYGVGNEVSTIGDVYSYGILLLELMIREKP 235
++ Y+ PE G D++S G+L E ++ + P
Sbjct: 172 TLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPP 208
>pdb|2YDJ|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
pdb|2YDJ|B Chain B, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 276
Score = 43.1 bits (100), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 27/83 (32%), Positives = 42/83 (50%), Gaps = 1/83 (1%)
Query: 156 AHCVLKPSNVLLDDDMTARVGDFGLARFLPPTRTQTSSIDVKGSIGYIAPEYGVGNEV-S 214
H +KP N+LLD+ ++ DFGLA + + G++ Y+APE E +
Sbjct: 127 THRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGTLPYVAPELLKRREFHA 186
Query: 215 TIGDVYSYGILLLELMIREKPSD 237
DV+S GI+L ++ E P D
Sbjct: 187 EPVDVWSCGIVLTAMLAGELPWD 209
>pdb|2XNE|A Chain A, Structure Of Aurora-A Bound To An Imidazopyrazine
Inhibitor
Length = 272
Score = 43.1 bits (100), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 29/115 (25%), Positives = 55/115 (47%), Gaps = 11/115 (9%)
Query: 139 DVASALNYLHHDCQPVTAHCVLKPSNVLLDDDMTARVGDFGLARFLPPTRTQTSSIDVKG 198
++A+AL+Y H H +KP N+LL ++ +FG + P +R T + G
Sbjct: 119 ELANALSYCHSK---RVIHRDIKPENLLLGSAGELKIANFGWSVHAPSSRRTT----LCG 171
Query: 199 SIGYIAPEYGVGNEVSTIGDVYSYGILLLELMIREKPSDIMFEGDMNLHKFAKMA 253
++ Y+ PE G D++S G+L E ++ + P FE + + +++
Sbjct: 172 TLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPP----FEANTYQETYKRIS 222
>pdb|4FG8|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-315 In Complex With Atp
pdb|4FG8|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-315 In Complex With Atp
Length = 315
Score = 43.1 bits (100), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 33/99 (33%), Positives = 48/99 (48%), Gaps = 9/99 (9%)
Query: 140 VASALNYLHHDCQPVTAHCVLKPSNVL---LDDDMTARVGDFGLARFLPPTRTQTSSIDV 196
V A+ YLH D V H LKP N+L LD+D + DFGL++ P +++
Sbjct: 125 VLDAVKYLH-DLGIV--HRDLKPENLLYYSLDEDSKIMISDFGLSKMEDPGSVLSTAC-- 179
Query: 197 KGSIGYIAPEYGVGNEVSTIGDVYSYGILLLELMIREKP 235
G+ GY+APE S D +S G++ L+ P
Sbjct: 180 -GTPGYVAPEVLAQKPYSKAVDCWSIGVIAYILLCGYPP 217
>pdb|4FT3|A Chain A, Crystal Structure Of The Chk1
pdb|4GH2|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 43.1 bits (100), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 27/83 (32%), Positives = 42/83 (50%), Gaps = 1/83 (1%)
Query: 156 AHCVLKPSNVLLDDDMTARVGDFGLARFLPPTRTQTSSIDVKGSIGYIAPEYGVGNEV-S 214
H +KP N+LLD+ ++ DFGLA + + G++ Y+APE E +
Sbjct: 126 THRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGTLPYVAPELLKRREFHA 185
Query: 215 TIGDVYSYGILLLELMIREKPSD 237
DV+S GI+L ++ E P D
Sbjct: 186 EPVDVWSCGIVLTAMLAGELPWD 208
>pdb|4FSZ|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 43.1 bits (100), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 27/83 (32%), Positives = 42/83 (50%), Gaps = 1/83 (1%)
Query: 156 AHCVLKPSNVLLDDDMTARVGDFGLARFLPPTRTQTSSIDVKGSIGYIAPEYGVGNEV-S 214
H +KP N+LLD+ ++ DFGLA + + G++ Y+APE E +
Sbjct: 126 THRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGTLPYVAPELLKRREFHA 185
Query: 215 TIGDVYSYGILLLELMIREKPSD 237
DV+S GI+L ++ E P D
Sbjct: 186 EPVDVWSCGIVLTAMLAGELPWD 208
>pdb|2WZJ|A Chain A, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|B Chain B, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|C Chain C, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|D Chain D, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|E Chain E, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|F Chain F, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
Length = 327
Score = 43.1 bits (100), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 34/100 (34%), Positives = 47/100 (47%), Gaps = 9/100 (9%)
Query: 140 VASALNYLHHDCQPVTAHCVLKPSNVLLDDDMTARVGDFGLARFLPPTRTQTSSID-VKG 198
+ SA+ Y H Q H LK N+LLD DM ++ DFG + T + +D G
Sbjct: 122 IVSAVQYCH---QKFIVHRDLKAENLLLDADMNIKIADFGFSNEF----TFGNKLDEFCG 174
Query: 199 SIGYIAPEYGVGNEVSTIG-DVYSYGILLLELMIREKPSD 237
S Y APE G + DV+S G++L L+ P D
Sbjct: 175 SPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFD 214
>pdb|2WQB|A Chain A, Structure Of The Tie2 Kinase Domain In Complex With A
Thiazolopyrimidine Inhibitor
Length = 324
Score = 43.1 bits (100), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 31/100 (31%), Positives = 51/100 (51%), Gaps = 16/100 (16%)
Query: 136 IAIDVASALNYLHHDCQPVTAHCVLKPSNVLLDDDMTARVGDFGLARFLPPTRTQTSSID 195
A DVA ++YL Q H L N+L+ ++ A++ DFGL+R +
Sbjct: 144 FAADVARGMDYL---SQKQFIHRNLAARNILVGENYVAKIADFGLSR--------GQEVY 192
Query: 196 VKGSIG-----YIAPEYGVGNEVSTIGDVYSYGILLLELM 230
VK ++G ++A E + +T DV+SYG+LL E++
Sbjct: 193 VKKTMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIV 232
>pdb|2QNJ|A Chain A, Kinase And Ubiquitin-Associated Domains Of Mark3PAR-1
pdb|2QNJ|B Chain B, Kinase And Ubiquitin-Associated Domains Of Mark3PAR-1
Length = 328
Score = 42.7 bits (99), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 34/100 (34%), Positives = 46/100 (46%), Gaps = 9/100 (9%)
Query: 140 VASALNYLHHDCQPVTAHCVLKPSNVLLDDDMTARVGDFGLARFLPPTRTQTSSIDVK-G 198
+ SA+ Y H Q H LK N+LLD DM ++ DFG + T +D G
Sbjct: 120 IVSAVQYCH---QKRIVHRDLKAENLLLDADMNIKIADFGFSNEF----TVGGKLDTFCG 172
Query: 199 SIGYIAPEYGVGNEVSTIG-DVYSYGILLLELMIREKPSD 237
S Y APE G + DV+S G++L L+ P D
Sbjct: 173 SPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFD 212
>pdb|1S9I|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 2 (Mek2)in A Complex With Ligand And Mgatp
pdb|1S9I|B Chain B, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 2 (Mek2)in A Complex With Ligand And Mgatp
Length = 354
Score = 42.7 bits (99), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 30/100 (30%), Positives = 49/100 (49%), Gaps = 6/100 (6%)
Query: 136 IAIDVASALNYLHHDCQPVTAHCVLKPSNVLLDDDMTARVGDFGLARFLPPTRTQTSSID 195
++I V L YL Q H +KPSN+L++ ++ DFG++ L + +
Sbjct: 119 VSIAVLRGLAYLREKHQ--IMHRDVKPSNILVNSRGEIKLCDFGVSGQL----IDSMANS 172
Query: 196 VKGSIGYIAPEYGVGNEVSTIGDVYSYGILLLELMIREKP 235
G+ Y+APE G S D++S G+ L+EL + P
Sbjct: 173 FVGTRSYMAPERLQGTHYSVQSDIWSMGLSLVELAVGRYP 212
>pdb|1FVR|A Chain A, Tie2 Kinase Domain
pdb|1FVR|B Chain B, Tie2 Kinase Domain
Length = 327
Score = 42.7 bits (99), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 31/100 (31%), Positives = 51/100 (51%), Gaps = 16/100 (16%)
Query: 136 IAIDVASALNYLHHDCQPVTAHCVLKPSNVLLDDDMTARVGDFGLARFLPPTRTQTSSID 195
A DVA ++YL Q H L N+L+ ++ A++ DFGL+R +
Sbjct: 147 FAADVARGMDYL---SQKQFIHRDLAARNILVGENYVAKIADFGLSR--------GQEVY 195
Query: 196 VKGSIG-----YIAPEYGVGNEVSTIGDVYSYGILLLELM 230
VK ++G ++A E + +T DV+SYG+LL E++
Sbjct: 196 VKKTMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIV 235
>pdb|3H0Y|A Chain A, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|A Chain A, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|B Chain B, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|C Chain C, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H10|A Chain A, Aurora A Inhibitor Complex
pdb|3H10|B Chain B, Aurora A Inhibitor Complex
pdb|3H10|D Chain D, Aurora A Inhibitor Complex
pdb|3P9J|A Chain A, Aurora A Kinase Domain With Phthalazinone Pyrazole
Inhibitor
Length = 268
Score = 42.7 bits (99), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 27/97 (27%), Positives = 47/97 (48%), Gaps = 7/97 (7%)
Query: 139 DVASALNYLHHDCQPVTAHCVLKPSNVLLDDDMTARVGDFGLARFLPPTRTQTSSIDVKG 198
++A+AL+Y H H +KP N+LL ++ DFG + P +R + G
Sbjct: 116 ELANALSYCHSK---RVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRAA----LCG 168
Query: 199 SIGYIAPEYGVGNEVSTIGDVYSYGILLLELMIREKP 235
++ Y+ PE G D++S G+L E ++ + P
Sbjct: 169 TLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPP 205
>pdb|4FR4|A Chain A, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|B Chain B, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|C Chain C, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|D Chain D, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|E Chain E, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|F Chain F, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
Length = 384
Score = 42.7 bits (99), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 31/105 (29%), Positives = 49/105 (46%), Gaps = 13/105 (12%)
Query: 139 DVASALNYLHHDCQPVTAHCVLKPSNVLLDDDMTARVGDFGLARFLPPTRTQTSSIDVKG 198
++ AL+YL + H +KP N+LLD+ + DF +A LP +T + G
Sbjct: 123 ELVMALDYLQNQ---RIIHRDMKPDNILLDEHGHVHITDFNIAAMLP---RETQITTMAG 176
Query: 199 SIGYIAPEY-----GVGNEVSTIGDVYSYGILLLELMIREKPSDI 238
+ Y+APE G G + D +S G+ EL+ +P I
Sbjct: 177 TKPYMAPEMFSSRKGAGYSFAV--DWWSLGVTAYELLRGRRPYHI 219
>pdb|2W1C|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1G|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 275
Score = 42.7 bits (99), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 27/97 (27%), Positives = 47/97 (48%), Gaps = 7/97 (7%)
Query: 139 DVASALNYLHHDCQPVTAHCVLKPSNVLLDDDMTARVGDFGLARFLPPTRTQTSSIDVKG 198
++A+AL+Y H H +KP N+LL ++ DFG + P +R + G
Sbjct: 119 ELANALSYCHSK---RVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRXX----LCG 171
Query: 199 SIGYIAPEYGVGNEVSTIGDVYSYGILLLELMIREKP 235
++ Y+ PE G D++S G+L E ++ + P
Sbjct: 172 TLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPP 208
>pdb|2OO8|X Chain X, Synthesis, Structural Analysis, And Sar Studies Of
Triazine Derivatives As Potent, Selective Tie-2
Inhibitors
pdb|2OSC|A Chain A, Synthesis, Structural Analysis, And Sar Studies Of
Triazine Derivatives As Potent, Selective Tie-2
Inhibitors
pdb|2P4I|A Chain A, Evolution Of A Highly Selective And Potent
2-(Pyridin-2-Yl)- 1,3,5-Triazine Tie-2 Kinase Inhibitor
pdb|2P4I|B Chain B, Evolution Of A Highly Selective And Potent
2-(Pyridin-2-Yl)- 1,3,5-Triazine Tie-2 Kinase Inhibitor
pdb|3L8P|A Chain A, Crystal Structure Of Cytoplasmic Kinase Domain Of Tie2
Complexed With Inhibitor Cep11207
Length = 317
Score = 42.7 bits (99), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 31/100 (31%), Positives = 51/100 (51%), Gaps = 16/100 (16%)
Query: 136 IAIDVASALNYLHHDCQPVTAHCVLKPSNVLLDDDMTARVGDFGLARFLPPTRTQTSSID 195
A DVA ++YL Q H L N+L+ ++ A++ DFGL+R +
Sbjct: 137 FAADVARGMDYL---SQKQFIHRDLAARNILVGENYVAKIADFGLSR--------GQEVY 185
Query: 196 VKGSIG-----YIAPEYGVGNEVSTIGDVYSYGILLLELM 230
VK ++G ++A E + +T DV+SYG+LL E++
Sbjct: 186 VKKTMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIV 225
>pdb|3COH|A Chain A, Crystal Structure Of Aurora-A In Complex With A
Pentacyclic Inhibitor
pdb|3COH|B Chain B, Crystal Structure Of Aurora-A In Complex With A
Pentacyclic Inhibitor
Length = 268
Score = 42.7 bits (99), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 27/97 (27%), Positives = 47/97 (48%), Gaps = 7/97 (7%)
Query: 139 DVASALNYLHHDCQPVTAHCVLKPSNVLLDDDMTARVGDFGLARFLPPTRTQTSSIDVKG 198
++A+AL+Y H H +KP N+LL ++ DFG + P +R + G
Sbjct: 116 ELANALSYCHSK---KVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRAA----LCG 168
Query: 199 SIGYIAPEYGVGNEVSTIGDVYSYGILLLELMIREKP 235
++ Y+ PE G D++S G+L E ++ + P
Sbjct: 169 TLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPP 205
>pdb|1A06|A Chain A, Calmodulin-Dependent Protein Kinase From Rat
Length = 332
Score = 42.7 bits (99), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 33/99 (33%), Positives = 48/99 (48%), Gaps = 9/99 (9%)
Query: 140 VASALNYLHHDCQPVTAHCVLKPSNVL---LDDDMTARVGDFGLARFLPPTRTQTSSIDV 196
V A+ YLH D V H LKP N+L LD+D + DFGL++ P +++
Sbjct: 125 VLDAVKYLH-DLGIV--HRDLKPENLLYYSLDEDSKIMISDFGLSKMEDPGSVLSTAC-- 179
Query: 197 KGSIGYIAPEYGVGNEVSTIGDVYSYGILLLELMIREKP 235
G+ GY+APE S D +S G++ L+ P
Sbjct: 180 -GTPGYVAPEVLAQKPYSKAVDCWSIGVIAYILLCGYPP 217
>pdb|4GT5|A Chain A, Crystal Structure Of The Inactive Trka Kinase Domain
Length = 306
Score = 42.7 bits (99), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 44/192 (22%), Positives = 81/192 (42%), Gaps = 31/192 (16%)
Query: 57 QGAFKSFIAECKALRNIRHRNLIKVLTACLGVDYQGNDFKALVYEFMHNRSLKEWLY--- 113
+ A + F E + L ++H+++++ C +G +V+E+M + L +L
Sbjct: 61 ESARQDFQREAELLTMLQHQHIVRFFGVCT----EGRPL-LMVFEYMRHGDLNRFLRSHG 115
Query: 114 PISK-----EDETYKRPXXXXXXXXXXIAIDVASALNYL------HHDCQPVTAHCVLKP 162
P +K ED P +A VA+ + YL H D L
Sbjct: 116 PDAKLLAGGEDVA---PGPLGLGQLLAVASQVAAGMVYLAGLHFVHRD---------LAT 163
Query: 163 SNVLLDDDMTARVGDFGLARFLPPTRTQTSSIDVKGSIGYIAPEYGVGNEVSTIGDVYSY 222
N L+ + ++GDFG++R + T I ++ PE + + +T DV+S+
Sbjct: 164 RNCLVGQGLVVKIGDFGMSRDIYSTDYYRVGGRTMLPIRWMPPESILYRKFTTESDVWSF 223
Query: 223 GILLLELMIREK 234
G++L E+ K
Sbjct: 224 GVVLWEIFTYGK 235
>pdb|4F0I|A Chain A, Crystal Structure Of Apo Trka
pdb|4F0I|B Chain B, Crystal Structure Of Apo Trka
Length = 300
Score = 42.7 bits (99), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 44/189 (23%), Positives = 81/189 (42%), Gaps = 25/189 (13%)
Query: 57 QGAFKSFIAECKALRNIRHRNLIKVLTACLGVDYQGNDFKALVYEFMHNRSLKEWLY--- 113
+ A + F E + L ++H+++++ C +G +V+E+M + L +L
Sbjct: 55 ESARQDFQREAELLTMLQHQHIVRFFGVCT----EGRPL-LMVFEYMRHGDLNRFLRSHG 109
Query: 114 PISK-----EDETYKRPXXXXXXXXXXIAIDVASALNYLHHDCQPVTAHCV---LKPSNV 165
P +K ED P +A VA+ + YL H V L N
Sbjct: 110 PDAKLLAGGEDVA---PGPLGLGQLLAVASQVAAGMVYL------AGLHFVHRDLATRNC 160
Query: 166 LLDDDMTARVGDFGLARFLPPTRTQTSSIDVKGSIGYIAPEYGVGNEVSTIGDVYSYGIL 225
L+ + ++GDFG++R + T I ++ PE + + +T DV+S+G++
Sbjct: 161 LVGQGLVVKIGDFGMSRDIYSTDYYRVGGRTMLPIRWMPPESILYRKFTTESDVWSFGVV 220
Query: 226 LLELMIREK 234
L E+ K
Sbjct: 221 LWEIFTYGK 229
>pdb|1ZXE|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|C Chain C, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|D Chain D, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|E Chain E, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|F Chain F, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
Length = 303
Score = 42.7 bits (99), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 34/105 (32%), Positives = 51/105 (48%), Gaps = 18/105 (17%)
Query: 140 VASALNYLHHDCQPVTAHCVLKPSNVLLDDDMTARVGDFGLARF---------LPPTRTQ 190
+ AL+Y+H Q + H LKP N+ +D+ ++GDFGLA+ L
Sbjct: 125 ILEALSYIH--SQGII-HRNLKPXNIFIDESRNVKIGDFGLAKNVHRSLDILKLDSQNLP 181
Query: 191 TSSIDVKGSIG---YIAPEY--GVGNEVSTIGDVYSYGILLLELM 230
SS ++ +IG Y+A E G G+ I D YS GI+ E +
Sbjct: 182 GSSDNLTSAIGTAXYVATEVLDGTGHYNEKI-DXYSLGIIFFEXI 225
>pdb|4FG7|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-293 In Complex With Atp
Length = 293
Score = 42.7 bits (99), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 33/99 (33%), Positives = 48/99 (48%), Gaps = 9/99 (9%)
Query: 140 VASALNYLHHDCQPVTAHCVLKPSNVL---LDDDMTARVGDFGLARFLPPTRTQTSSIDV 196
V A+ YLH D V H LKP N+L LD+D + DFGL++ P +++
Sbjct: 125 VLDAVKYLH-DLGIV--HRDLKPENLLYYSLDEDSKIMISDFGLSKMEDPGSVLSTAC-- 179
Query: 197 KGSIGYIAPEYGVGNEVSTIGDVYSYGILLLELMIREKP 235
G+ GY+APE S D +S G++ L+ P
Sbjct: 180 -GTPGYVAPEVLAQKPYSKAVDCWSIGVIAYILLCGYPP 217
>pdb|2F57|A Chain A, Crystal Structure Of The Human P21-activated Kinase 5
pdb|2F57|B Chain B, Crystal Structure Of The Human P21-activated Kinase 5
Length = 317
Score = 42.7 bits (99), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 51/234 (21%), Positives = 101/234 (43%), Gaps = 25/234 (10%)
Query: 54 LRRQGAFKSFIAECKALRNIRHRNLIKVLTACLGVDYQGNDFKALVYEFMHNRSLKEWLY 113
LR+Q + E +R+ H N++ + ++ Y D +V EF+ +L + +
Sbjct: 80 LRKQQRRELLFNEVVIMRDYHHDNVVDMYSS-----YLVGDELWVVMEFLEGGALTDIVT 134
Query: 114 PISKEDETYKRPXXXXXXXXXXIAIDVASALNYLHHDCQPVTAHCVLKPSNVLLDDDMTA 173
+E + + V AL+YLH+ H +K ++LL D
Sbjct: 135 HTRMNEEQ-----------IATVCLSVLRALSYLHNQG---VIHRDIKSDSILLTSDGRI 180
Query: 174 RVGDFGLARFLPPTRTQTSSIDVKGSIGYIAPEYGVGNEVSTIGDVYSYGILLLELMIRE 233
++ DFG + ++ + G+ ++APE T D++S GI+++E++ E
Sbjct: 181 KLSDFGFCAQV--SKEVPKRKXLVGTPYWMAPEVISRLPYGTEVDIWSLGIMVIEMIDGE 238
Query: 234 KPSDIMFEGDMNLHKFAKMALSNHVKDI--VDSILLNDDEKLVVRGDQKQTQAK 285
P E + + + +L VKD+ V S+L + ++VR ++ A+
Sbjct: 239 PP--YFNEPPLQAMRRIRDSLPPRVKDLHKVSSVLRGFLDLMLVREPSQRATAQ 290
>pdb|3CJF|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
3,4,5-Trimethoxy Aniline Containing Pyrimidine
Length = 309
Score = 42.7 bits (99), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 47/174 (27%), Positives = 76/174 (43%), Gaps = 12/174 (6%)
Query: 61 KSFIAECKALRNIRHR-NLIKVLTACLGVDYQGNDFKALVYEFMHNRSLKEWLYPISKED 119
++ ++E K L +I H N++ +L AC G +V EF +L +L E
Sbjct: 75 RALMSELKILIHIGHHLNVVNLLGACTK---PGGPLMVIV-EFCKFGNLSTYLRSKRNEF 130
Query: 120 ETYKRPXXXXXXXXXXI--AIDVASALNYLHHDCQPVTAHCVLKPSNVLLDDDMTARVGD 177
YK I + VA + +L H L N+LL + ++ D
Sbjct: 131 VPYKDLYKDFLTLEHLIXYSFQVAKGMEFL---ASRKXIHRDLAARNILLSEKNVVKIXD 187
Query: 178 FGLARFLPPTRTQTSSIDVKGSIGYIAPEYGVGNEVSTI-GDVYSYGILLLELM 230
FGLAR + D + + ++APE + + V TI DV+S+G+LL E+
Sbjct: 188 FGLARDIYKDPDYVRKGDARLPLKWMAPE-TIFDRVYTIQSDVWSFGVLLWEIF 240
>pdb|3HA6|A Chain A, Crystal Structure Of Aurora A In Complex With Tpx2 And
Compound 10
Length = 268
Score = 42.7 bits (99), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 27/97 (27%), Positives = 47/97 (48%), Gaps = 7/97 (7%)
Query: 139 DVASALNYLHHDCQPVTAHCVLKPSNVLLDDDMTARVGDFGLARFLPPTRTQTSSIDVKG 198
++A+AL+Y H H +KP N+LL ++ DFG + P +R + G
Sbjct: 116 ELANALSYCHSK---RVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRXX----LCG 168
Query: 199 SIGYIAPEYGVGNEVSTIGDVYSYGILLLELMIREKP 235
++ Y+ PE G D++S G+L E ++ + P
Sbjct: 169 TLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPP 205
>pdb|3E5A|A Chain A, Crystal Structure Of Aurora A In Complex With Vx-680 And
Tpx2
Length = 268
Score = 42.7 bits (99), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 27/97 (27%), Positives = 47/97 (48%), Gaps = 7/97 (7%)
Query: 139 DVASALNYLHHDCQPVTAHCVLKPSNVLLDDDMTARVGDFGLARFLPPTRTQTSSIDVKG 198
++A+AL+Y H H +KP N+LL ++ DFG + P +R + G
Sbjct: 116 ELANALSYCHSK---RVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSR----RTXLCG 168
Query: 199 SIGYIAPEYGVGNEVSTIGDVYSYGILLLELMIREKP 235
++ Y+ PE G D++S G+L E ++ + P
Sbjct: 169 TLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPP 205
>pdb|1ZMW|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
T208aS212A INACTIVE DOUBLE MUTANT
pdb|1ZMW|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
T208aS212A INACTIVE DOUBLE MUTANT
Length = 327
Score = 42.7 bits (99), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 33/100 (33%), Positives = 47/100 (47%), Gaps = 9/100 (9%)
Query: 140 VASALNYLHHDCQPVTAHCVLKPSNVLLDDDMTARVGDFGLARFLPPTRTQTSSIDVK-G 198
+ SA+ Y H Q H LK N+LLD DM ++ DFG + T + +D G
Sbjct: 122 IVSAVQYCH---QKFIVHRDLKAENLLLDADMNIKIADFGFSNEF----TFGNKLDAFCG 174
Query: 199 SIGYIAPEYGVGNEVSTIG-DVYSYGILLLELMIREKPSD 237
+ Y APE G + DV+S G++L L+ P D
Sbjct: 175 APPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFD 214
>pdb|3BBT|B Chain B, Crystal Structure Of The Erbb4 Kinase In Complex With
Lapatinib
pdb|3BBT|D Chain D, Crystal Structure Of The Erbb4 Kinase In Complex With
Lapatinib
pdb|3BBW|B Chain B, Crystal Structure Of The Erbb4 Kinase In Its Inactive
Conformation
pdb|3BBW|A Chain A, Crystal Structure Of The Erbb4 Kinase In Its Inactive
Conformation
pdb|3BCE|A Chain A, Crystal Structure Of The Erbb4 Kinase
pdb|3BCE|B Chain B, Crystal Structure Of The Erbb4 Kinase
pdb|3BCE|C Chain C, Crystal Structure Of The Erbb4 Kinase
Length = 328
Score = 42.4 bits (98), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 43/177 (24%), Positives = 74/177 (41%), Gaps = 19/177 (10%)
Query: 62 SFIAECKALRNIRHRNLIKVLTACLGVDYQGNDFKALVYEFMHNRSLKEWLYPISKEDET 121
F+ E + ++ H +L+++L CL Q LV + M + L E+++
Sbjct: 63 EFMDEALIMASMDHPHLVRLLGVCLSPTIQ------LVTQLMPHGCLLEYVH-------- 108
Query: 122 YKRPXXXXXXXXXXIAIDVASALNYLHHDCQPVTAHCVLKPSNVLLDDDMTARVGDFGLA 181
+ + +A + YL + H L NVL+ ++ DFGLA
Sbjct: 109 -EHKDNIGSQLLLNWCVQIAKGMMYLE---ERRLVHRDLAARNVLVKSPNHVKITDFGLA 164
Query: 182 RFLPPTRTQTSSIDVKGSIGYIAPEYGVGNEVSTIGDVYSYGILLLELM-IREKPSD 237
R L + ++ K I ++A E + + DV+SYG+ + ELM KP D
Sbjct: 165 RLLEGDEKEYNADGGKMPIKWMALECIHYRKFTHQSDVWSYGVTIWELMTFGGKPYD 221
>pdb|4AOJ|A Chain A, Human Trka In Complex With The Inhibitor Az-23
pdb|4AOJ|B Chain B, Human Trka In Complex With The Inhibitor Az-23
pdb|4AOJ|C Chain C, Human Trka In Complex With The Inhibitor Az-23
Length = 329
Score = 42.4 bits (98), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 44/189 (23%), Positives = 81/189 (42%), Gaps = 25/189 (13%)
Query: 57 QGAFKSFIAECKALRNIRHRNLIKVLTACLGVDYQGNDFKALVYEFMHNRSLKEWLY--- 113
+ A + F E + L ++H+++++ C +G +V+E+M + L +L
Sbjct: 84 ESARQDFQREAELLTMLQHQHIVRFFGVCT----EGRPL-LMVFEYMRHGDLNRFLRSHG 138
Query: 114 PISK-----EDETYKRPXXXXXXXXXXIAIDVASALNYLHHDCQPVTAHCV---LKPSNV 165
P +K ED P +A VA+ + YL H V L N
Sbjct: 139 PDAKLLAGGEDVA---PGPLGLGQLLAVASQVAAGMVYL------AGLHFVHRDLATRNC 189
Query: 166 LLDDDMTARVGDFGLARFLPPTRTQTSSIDVKGSIGYIAPEYGVGNEVSTIGDVYSYGIL 225
L+ + ++GDFG++R + T I ++ PE + + +T DV+S+G++
Sbjct: 190 LVGQGLVVKIGDFGMSRDIYSTDYYRVGGRTMLPIRWMPPESILYRKFTTESDVWSFGVV 249
Query: 226 LLELMIREK 234
L E+ K
Sbjct: 250 LWEIFTYGK 258
>pdb|3FI2|A Chain A, Crystal Structure Of Jnk3 With Amino-Pyrazole Inhibitor,
Sr- 3451
Length = 353
Score = 42.4 bits (98), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 30/86 (34%), Positives = 45/86 (52%), Gaps = 7/86 (8%)
Query: 157 HCVLKPSNVLLDDDMTARVGDFGLARFLPPTRTQTSSIDVKGSIGYIAPEYGVGNEVSTI 216
H LKPSN+++ D T ++ DFGLAR + T + + Y APE +G
Sbjct: 149 HRDLKPSNIVVKSDXTLKILDFGLARTAGTSFMMTPYVVTR---YYRAPEVILGMGYKEN 205
Query: 217 GDVYSYGILLLELMIREKPSDIMFEG 242
D++S G ++ E M+R K I+F G
Sbjct: 206 VDIWSVGCIMGE-MVRHK---ILFPG 227
>pdb|2AYP|A Chain A, Crystal Structure Of Chk1 With An Indol Inhibitor
Length = 269
Score = 42.4 bits (98), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 27/83 (32%), Positives = 42/83 (50%), Gaps = 1/83 (1%)
Query: 156 AHCVLKPSNVLLDDDMTARVGDFGLARFLPPTRTQTSSIDVKGSIGYIAPEYGVGNEV-S 214
H +KP N+LLD+ ++ DFGLA + + G++ Y+APE E +
Sbjct: 127 THRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHA 186
Query: 215 TIGDVYSYGILLLELMIREKPSD 237
DV+S GI+L ++ E P D
Sbjct: 187 EPVDVWSCGIVLTAMLAGELPWD 209
>pdb|2GHG|A Chain A, H-Chk1 Complexed With A431994
pdb|2YWP|A Chain A, Crystal Structure Of Chk1 With A Urea Inhibitor
pdb|2E9N|A Chain A, Structure Of H-chk1 Complexed With A767085
pdb|2E9O|A Chain A, Structure Of H-Chk1 Complexed With Aa582939
pdb|2E9P|A Chain A, Structure Of H-Chk1 Complexed With A771129
pdb|2E9U|A Chain A, Structure Of H-Chk1 Complexed With A780125
Length = 269
Score = 42.4 bits (98), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 27/83 (32%), Positives = 42/83 (50%), Gaps = 1/83 (1%)
Query: 156 AHCVLKPSNVLLDDDMTARVGDFGLARFLPPTRTQTSSIDVKGSIGYIAPEYGVGNEV-S 214
H +KP N+LLD+ ++ DFGLA + + G++ Y+APE E +
Sbjct: 126 THRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHA 185
Query: 215 TIGDVYSYGILLLELMIREKPSD 237
DV+S GI+L ++ E P D
Sbjct: 186 EPVDVWSCGIVLTAMLAGELPWD 208
>pdb|2X8E|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2YER|A Chain A, Synthesis And Evaluation Of Triazolones As Checkpoint
Kinase 1 Inhibitors
pdb|2YEX|A Chain A, Synthesis And Evaluation Of Triazolones As Checkpoint
Kinase 1 Inhibitors
pdb|2YDK|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 276
Score = 42.4 bits (98), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 27/83 (32%), Positives = 42/83 (50%), Gaps = 1/83 (1%)
Query: 156 AHCVLKPSNVLLDDDMTARVGDFGLARFLPPTRTQTSSIDVKGSIGYIAPEYGVGNEV-S 214
H +KP N+LLD+ ++ DFGLA + + G++ Y+APE E +
Sbjct: 127 THRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHA 186
Query: 215 TIGDVYSYGILLLELMIREKPSD 237
DV+S GI+L ++ E P D
Sbjct: 187 EPVDVWSCGIVLTAMLAGELPWD 209
>pdb|3OT3|A Chain A, X-Ray Crystal Structure Of Compound 22k Bound To Human
Chk1 Kinase Domain
pdb|3OT8|A Chain A, X-Ray Crystal Structure Of Compound 17r Bound To Human
Chk1 Kinase Domain
pdb|3PA3|A Chain A, X-Ray Crystal Structure Of Compound 70 Bound To Human Chk1
Kinase Domain
pdb|3PA4|A Chain A, X-Ray Crystal Structure Of Compound 2a Bound To Human Chk1
Kinase Domain
pdb|3PA5|A Chain A, X-Ray Crystal Structure Of Compound 1 Bound To Human Chk1
Kinase Domain
pdb|3U9N|A Chain A, X-Ray Crystal Structure Of Compound 1 Bound To Human Chk1
Kinase Domain
Length = 273
Score = 42.4 bits (98), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 27/83 (32%), Positives = 42/83 (50%), Gaps = 1/83 (1%)
Query: 156 AHCVLKPSNVLLDDDMTARVGDFGLARFLPPTRTQTSSIDVKGSIGYIAPEYGVGNEV-S 214
H +KP N+LLD+ ++ DFGLA + + G++ Y+APE E +
Sbjct: 126 THRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHA 185
Query: 215 TIGDVYSYGILLLELMIREKPSD 237
DV+S GI+L ++ E P D
Sbjct: 186 EPVDVWSCGIVLTAMLAGELPWD 208
>pdb|2E9V|A Chain A, Structure Of H-Chk1 Complexed With A859017
pdb|2E9V|B Chain B, Structure Of H-Chk1 Complexed With A859017
Length = 268
Score = 42.4 bits (98), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 27/83 (32%), Positives = 42/83 (50%), Gaps = 1/83 (1%)
Query: 156 AHCVLKPSNVLLDDDMTARVGDFGLARFLPPTRTQTSSIDVKGSIGYIAPEYGVGNEV-S 214
H +KP N+LLD+ ++ DFGLA + + G++ Y+APE E +
Sbjct: 126 THRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHA 185
Query: 215 TIGDVYSYGILLLELMIREKPSD 237
DV+S GI+L ++ E P D
Sbjct: 186 EPVDVWSCGIVLTAMLAGELPWD 208
>pdb|1OMW|A Chain A, Crystal Structure Of The Complex Between G Protein-Coupled
Receptor Kinase 2 And Heterotrimeric G Protein Beta 1
And Gamma 2 Subunits
pdb|1YM7|A Chain A, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|B Chain B, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|C Chain C, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|D Chain D, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|2BCJ|A Chain A, Crystal Structure Of G Protein-coupled Receptor Kinase 2
In Complex With Galpha-q And Gbetagamma Subunits
pdb|3UZS|A Chain A, Structure Of The C13.28 Rna Aptamer Bound To The G
Protein-Coupled Receptor Kinase 2-Heterotrimeric G
Protein Beta 1 And Gamma 2 Subunit Complex
pdb|3UZT|A Chain A, Structure Of The C13.18 Rna Aptamer In Complex With G
Protein-Coupled Receptor Kinase 2
Length = 689
Score = 42.4 bits (98), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 31/102 (30%), Positives = 49/102 (48%), Gaps = 12/102 (11%)
Query: 137 AIDVASALNYLHHDCQPVTAHCVLKPSNVLLDDDMTARVGDFGLARFLPPTRTQTSSIDV 196
A ++ L ++H+ + LKP+N+LLD+ R+ D GLA + S
Sbjct: 298 AAEIILGLEHMHNR---FVVYRDLKPANILLDEHGHVRISDLGLACDFSKKKPHASV--- 351
Query: 197 KGSIGYIAPEY---GVGNEVSTIGDVYSYGILLLELMIREKP 235
G+ GY+APE GV + S D +S G +L +L+ P
Sbjct: 352 -GTHGYMAPEVLQKGVAYDSS--ADWFSLGCMLFKLLRGHSP 390
>pdb|4FSN|A Chain A, Crystal Structure Of The Chk1
Length = 278
Score = 42.4 bits (98), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 27/83 (32%), Positives = 42/83 (50%), Gaps = 1/83 (1%)
Query: 156 AHCVLKPSNVLLDDDMTARVGDFGLARFLPPTRTQTSSIDVKGSIGYIAPEYGVGNEV-S 214
H +KP N+LLD+ ++ DFGLA + + G++ Y+APE E +
Sbjct: 125 THRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHA 184
Query: 215 TIGDVYSYGILLLELMIREKPSD 237
DV+S GI+L ++ E P D
Sbjct: 185 EPVDVWSCGIVLTAMLAGELPWD 207
>pdb|3PSC|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits
pdb|3PVU|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits And A
Selective Kinase Inhibitor (Cmpd101)
pdb|3PVW|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits And A
Selective Kinase Inhibitor (Cmpd103a)
Length = 695
Score = 42.4 bits (98), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 31/102 (30%), Positives = 49/102 (48%), Gaps = 12/102 (11%)
Query: 137 AIDVASALNYLHHDCQPVTAHCVLKPSNVLLDDDMTARVGDFGLARFLPPTRTQTSSIDV 196
A ++ L ++H+ + LKP+N+LLD+ R+ D GLA + S
Sbjct: 298 AAEIILGLEHMHNR---FVVYRDLKPANILLDEHGHVRISDLGLACDFSKKKPHASV--- 351
Query: 197 KGSIGYIAPEY---GVGNEVSTIGDVYSYGILLLELMIREKP 235
G+ GY+APE GV + S D +S G +L +L+ P
Sbjct: 352 -GTHGYMAPEVLQKGVAYDSS--ADWFSLGCMLFKLLRGHSP 390
>pdb|3FV8|A Chain A, Jnk3 Bound To Piperazine Amide Inhibitor, Sr2774
Length = 355
Score = 42.4 bits (98), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 30/86 (34%), Positives = 45/86 (52%), Gaps = 7/86 (8%)
Query: 157 HCVLKPSNVLLDDDMTARVGDFGLARFLPPTRTQTSSIDVKGSIGYIAPEYGVGNEVSTI 216
H LKPSN+++ D T ++ DFGLAR + T + + Y APE +G
Sbjct: 149 HRDLKPSNIVVKSDXTLKILDFGLARTAGTSFMMTPYVVTR---YYRAPEVILGMGYKEN 205
Query: 217 GDVYSYGILLLELMIREKPSDIMFEG 242
D++S G ++ E M+R K I+F G
Sbjct: 206 VDIWSVGCIMGE-MVRHK---ILFPG 227
>pdb|3JVR|A Chain A, Characterization Of The Chk1 Allosteric Inhibitor Binding
Site
pdb|3JVS|A Chain A, Characterization Of The Chk1 Allosteric Inhibitor Binding
Site
Length = 271
Score = 42.4 bits (98), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 27/83 (32%), Positives = 42/83 (50%), Gaps = 1/83 (1%)
Query: 156 AHCVLKPSNVLLDDDMTARVGDFGLARFLPPTRTQTSSIDVKGSIGYIAPEYGVGNEV-S 214
H +KP N+LLD+ ++ DFGLA + + G++ Y+APE E +
Sbjct: 126 THRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHA 185
Query: 215 TIGDVYSYGILLLELMIREKPSD 237
DV+S GI+L ++ E P D
Sbjct: 186 EPVDVWSCGIVLTAMLAGELPWD 208
>pdb|3CIK|A Chain A, Human Grk2 In Complex With Gbetagamma Subunits
pdb|3V5W|A Chain A, Human G Protein-Coupled Receptor Kinase 2 In Complex With
Soluble Gbetagamma Subunits And Paroxetine
Length = 689
Score = 42.4 bits (98), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 31/102 (30%), Positives = 49/102 (48%), Gaps = 12/102 (11%)
Query: 137 AIDVASALNYLHHDCQPVTAHCVLKPSNVLLDDDMTARVGDFGLARFLPPTRTQTSSIDV 196
A ++ L ++H+ + LKP+N+LLD+ R+ D GLA + S
Sbjct: 298 AAEIILGLEHMHNR---FVVYRDLKPANILLDEHGHVRISDLGLACDFSKKKPHASV--- 351
Query: 197 KGSIGYIAPEY---GVGNEVSTIGDVYSYGILLLELMIREKP 235
G+ GY+APE GV + S D +S G +L +L+ P
Sbjct: 352 -GTHGYMAPEVLQKGVAYDSS--ADWFSLGCMLFKLLRGHSP 390
>pdb|4FSU|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 42.4 bits (98), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 27/83 (32%), Positives = 42/83 (50%), Gaps = 1/83 (1%)
Query: 156 AHCVLKPSNVLLDDDMTARVGDFGLARFLPPTRTQTSSIDVKGSIGYIAPEYGVGNEV-S 214
H +KP N+LLD+ ++ DFGLA + + G++ Y+APE E +
Sbjct: 126 THRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHA 185
Query: 215 TIGDVYSYGILLLELMIREKPSD 237
DV+S GI+L ++ E P D
Sbjct: 186 EPVDVWSCGIVLTAMLAGELPWD 208
>pdb|3QA8|A Chain A, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|B Chain B, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|C Chain C, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|D Chain D, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|E Chain E, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|F Chain F, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|G Chain G, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|H Chain H, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
Length = 676
Score = 42.4 bits (98), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 39/177 (22%), Positives = 73/177 (41%), Gaps = 17/177 (9%)
Query: 63 FIAECKALRNIRHRNLIKVLTACLGVD-YQGNDFKALVYEFMHNRSLKEWLYPISKEDET 121
+ E + ++ + H N++ G+ ND L E+ L+++L
Sbjct: 59 WCLEIQIMKKLNHPNVVSAREVPDGLQKLAPNDLPLLAMEYCEGGDLRKYL-------NQ 111
Query: 122 YKRPXXXXXXXXXXIAIDVASALNYLHHDCQPVTAHCVLKPSNVLLD---DDMTARVGDF 178
++ + D++SAL YLH + H LKP N++L + ++ D
Sbjct: 112 FENCCGLKEGPIRTLLSDISSALRYLHEN---RIIHRDLKPENIVLQPGPQRLIHKIIDL 168
Query: 179 GLARFLPPTRTQTSSIDVKGSIGYIAPEYGVGNEVSTIGDVYSYGILLLELMIREKP 235
G A+ L T + G++ Y+APE + + D +S+G L E + +P
Sbjct: 169 GYAKELDQGELCTEFV---GTLQYLAPELLEQKKYTVTVDYWSFGTLAFECITGFRP 222
Score = 30.4 bits (67), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 21/60 (35%), Positives = 36/60 (60%), Gaps = 3/60 (5%)
Query: 248 KFAKMALSNHVKDIVDSILLNDDEKLVVRGDQKQTQAKINIIRECVISMVRIGVACSMES 307
K + LS VK++++ L+ +DEK+VVR +K+ Q N+++ S VR V+ S +S
Sbjct: 620 KRKALELSPKVKEVMN--LMREDEKIVVRRQEKRQQELWNLLK-IACSKVRGPVSGSPDS 676
>pdb|3CJG|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
3,4,5-Trimethoxy Aniline Containing Pyrimidine
Length = 309
Score = 42.4 bits (98), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 47/174 (27%), Positives = 76/174 (43%), Gaps = 12/174 (6%)
Query: 61 KSFIAECKALRNIRHR-NLIKVLTACLGVDYQGNDFKALVYEFMHNRSLKEWLYPISKED 119
++ ++E K L +I H N++ +L AC G +V EF +L +L E
Sbjct: 75 RALMSELKILIHIGHHLNVVNLLGACTK---PGGPLMVIV-EFCKFGNLSTYLRSKRNEF 130
Query: 120 ETYKRPXXXXXXXXXXI--AIDVASALNYLHHDCQPVTAHCVLKPSNVLLDDDMTARVGD 177
YK I + VA + +L H L N+LL + ++ D
Sbjct: 131 VPYKDLYKDFLTLEHLICYSFQVAKGMEFL---ASRKXIHRDLAARNILLSEKNVVKICD 187
Query: 178 FGLARFLPPTRTQTSSIDVKGSIGYIAPEYGVGNEVSTI-GDVYSYGILLLELM 230
FGLAR + D + + ++APE + + V TI DV+S+G+LL E+
Sbjct: 188 FGLARDIYKDPDYVRKGDARLPLKWMAPE-TIFDRVYTIQSDVWSFGVLLWEIF 240
>pdb|4FSM|A Chain A, Crystal Structure Of The Chk1
pdb|4FSQ|A Chain A, Crystal Structure Of The Chk1
pdb|4FSR|A Chain A, Crystal Structure Of The Chk1
pdb|4FT0|A Chain A, Crystal Structure Of The Chk1
pdb|4FT5|A Chain A, Crystal Structure Of The Chk1
pdb|4FT7|A Chain A, Crystal Structure Of The Chk1
pdb|4FT9|A Chain A, Crystal Structure Of The Chk1
pdb|4FTI|A Chain A, Crystal Structure Of The Chk1
pdb|4FTJ|A Chain A, Crystal Structure Of The Chk1
pdb|4FTK|A Chain A, Crystal Structure Of The Chk1
pdb|4FTL|A Chain A, Crystal Structure Of The Chk1
pdb|4FTM|A Chain A, Crystal Structure Of The Chk1
pdb|4FTO|A Chain A, Crystal Structure Of The Chk1
pdb|4FTR|A Chain A, Crystal Structure Of The Chk1
pdb|4FTT|A Chain A, Crystal Structure Of The Chk1
pdb|4FTU|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 42.0 bits (97), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 27/83 (32%), Positives = 42/83 (50%), Gaps = 1/83 (1%)
Query: 156 AHCVLKPSNVLLDDDMTARVGDFGLARFLPPTRTQTSSIDVKGSIGYIAPEYGVGNEV-S 214
H +KP N+LLD+ ++ DFGLA + + G++ Y+APE E +
Sbjct: 126 THRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHA 185
Query: 215 TIGDVYSYGILLLELMIREKPSD 237
DV+S GI+L ++ E P D
Sbjct: 186 EPVDVWSCGIVLTAMLAGELPWD 208
>pdb|3RZF|A Chain A, Crystal Structure Of Inhibitor Of Kappab Kinase Beta
(I4122)
Length = 677
Score = 42.0 bits (97), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 39/177 (22%), Positives = 73/177 (41%), Gaps = 17/177 (9%)
Query: 63 FIAECKALRNIRHRNLIKVLTACLGVD-YQGNDFKALVYEFMHNRSLKEWLYPISKEDET 121
+ E + ++ + H N++ G+ ND L E+ L+++L
Sbjct: 60 WCLEIQIMKKLNHPNVVSAREVPDGLQKLAPNDLPLLAMEYCEGGDLRKYL-------NQ 112
Query: 122 YKRPXXXXXXXXXXIAIDVASALNYLHHDCQPVTAHCVLKPSNVLLD---DDMTARVGDF 178
++ + D++SAL YLH + H LKP N++L + ++ D
Sbjct: 113 FENCCGLKEGPIRTLLSDISSALRYLHEN---RIIHRDLKPENIVLQPGPQRLIHKIIDL 169
Query: 179 GLARFLPPTRTQTSSIDVKGSIGYIAPEYGVGNEVSTIGDVYSYGILLLELMIREKP 235
G A+ L T + G++ Y+APE + + D +S+G L E + +P
Sbjct: 170 GYAKELDQGELCTEFV---GTLQYLAPELLEQKKYTVTVDYWSFGTLAFECITGFRP 223
Score = 30.4 bits (67), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 21/60 (35%), Positives = 36/60 (60%), Gaps = 3/60 (5%)
Query: 248 KFAKMALSNHVKDIVDSILLNDDEKLVVRGDQKQTQAKINIIRECVISMVRIGVACSMES 307
K + LS VK++++ L+ +DEK+VVR +K+ Q N+++ S VR V+ S +S
Sbjct: 621 KRKALELSPKVKEVMN--LMREDEKIVVRRQEKRQQELWNLLK-IACSKVRGPVSGSPDS 677
>pdb|3Q4Z|A Chain A, Structure Of Unphosphorylated Pak1 Kinase Domain
pdb|3Q4Z|B Chain B, Structure Of Unphosphorylated Pak1 Kinase Domain
Length = 306
Score = 42.0 bits (97), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 26/93 (27%), Positives = 48/93 (51%), Gaps = 5/93 (5%)
Query: 143 ALNYLHHDCQPVTAHCVLKPSNVLLDDDMTARVGDFGLARFLPPTRTQTSSIDVKGSIGY 202
AL +LH + H +K N+LL D + ++ DFG + P +++ S++ G+ +
Sbjct: 129 ALEFLHSN---QVIHRNIKSDNILLGMDGSVKLTDFGFCAQITPEQSKRSTM--VGTPYW 183
Query: 203 IAPEYGVGNEVSTIGDVYSYGILLLELMIREKP 235
+APE D++S GI+ +E++ E P
Sbjct: 184 MAPEVVTRKAYGPKVDIWSLGIMAIEMIEGEPP 216
>pdb|3KRW|A Chain A, Human Grk2 In Complex With Gbetgamma Subunits And Balanol
(Soak)
pdb|3KRX|A Chain A, Human Grk2 In Complex With Gbetgamma Subunits And Balanol
(Co-Crystal)
Length = 688
Score = 42.0 bits (97), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 31/102 (30%), Positives = 49/102 (48%), Gaps = 12/102 (11%)
Query: 137 AIDVASALNYLHHDCQPVTAHCVLKPSNVLLDDDMTARVGDFGLARFLPPTRTQTSSIDV 196
A ++ L ++H+ + LKP+N+LLD+ R+ D GLA + S
Sbjct: 297 AAEIILGLEHMHNR---FVVYRDLKPANILLDEHGHVRISDLGLACDFSKKKPHASV--- 350
Query: 197 KGSIGYIAPEY---GVGNEVSTIGDVYSYGILLLELMIREKP 235
G+ GY+APE GV + S D +S G +L +L+ P
Sbjct: 351 -GTHGYMAPEVLQKGVAYDSS--ADWFSLGCMLFKLLRGHSP 389
>pdb|4FSY|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 42.0 bits (97), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 27/83 (32%), Positives = 42/83 (50%), Gaps = 1/83 (1%)
Query: 156 AHCVLKPSNVLLDDDMTARVGDFGLARFLPPTRTQTSSIDVKGSIGYIAPEYGVGNEV-S 214
H +KP N+LLD+ ++ DFGLA + + G++ Y+APE E +
Sbjct: 126 THRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHA 185
Query: 215 TIGDVYSYGILLLELMIREKPSD 237
DV+S GI+L ++ E P D
Sbjct: 186 EPVDVWSCGIVLTAMLAGELPWD 208
>pdb|1OB3|A Chain A, Structure Of P. Falciparum Pfpk5
pdb|1OB3|B Chain B, Structure Of P. Falciparum Pfpk5
pdb|1V0P|A Chain A, Structure Of P. Falciparum Pfpk5-Purvalanol B Ligand
Complex
pdb|1V0P|B Chain B, Structure Of P. Falciparum Pfpk5-Purvalanol B Ligand
Complex
Length = 288
Score = 42.0 bits (97), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 27/76 (35%), Positives = 44/76 (57%), Gaps = 5/76 (6%)
Query: 157 HCVLKPSNVLLDDDMTARVGDFGLAR-FLPPTRTQTSSIDVKGSIGYIAPEYGVGN-EVS 214
H LKP N+L++ + ++ DFGLAR F P R T I ++ Y AP+ +G+ + S
Sbjct: 123 HRDLKPQNLLINREGELKIADFGLARAFGIPVRKYTHEI---VTLWYRAPDVLMGSKKYS 179
Query: 215 TIGDVYSYGILLLELM 230
T D++S G + E++
Sbjct: 180 TTIDIWSVGCIFAEMV 195
>pdb|1ZYS|A Chain A, Co-Crystal Structure Of Checkpoint Kinase Chk1 With A
Pyrrolo-Pyridine Inhibitor
Length = 273
Score = 42.0 bits (97), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 27/83 (32%), Positives = 42/83 (50%), Gaps = 1/83 (1%)
Query: 156 AHCVLKPSNVLLDDDMTARVGDFGLARFLPPTRTQTSSIDVKGSIGYIAPEYGVGNEV-S 214
H +KP N+LLD+ ++ DFGLA + + G++ Y+APE E +
Sbjct: 127 THRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHA 186
Query: 215 TIGDVYSYGILLLELMIREKPSD 237
DV+S GI+L ++ E P D
Sbjct: 187 EPVDVWSCGIVLTAMLAGELPWD 209
>pdb|1LUF|A Chain A, Crystal Structure Of The Musk Tyrosine Kinase: Insights
Into Receptor Autoregulation
Length = 343
Score = 42.0 bits (97), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 43/182 (23%), Positives = 72/182 (39%), Gaps = 22/182 (12%)
Query: 63 FIAECKALRNIRHRNLIKVLTACLGVDYQGNDFKALVYEFMHNRSLKEWLYPISKED--- 119
F E + + N++K+L C L++E+M L E+L +S
Sbjct: 97 FQREAALMAEFDNPNIVKLLGVC-----AVGKPMCLLFEYMAYGDLNEFLRSMSPHTVCS 151
Query: 120 ------ETYKR-----PXXXXXXXXXXIAIDVASALNYLHHDCQPVTAHCVLKPSNVLLD 168
T R P IA VA+ + YL H L N L+
Sbjct: 152 LSHSDLSTRARVSSPGPPPLSCAEQLCIARQVAAGMAYLSER---KFVHRDLATRNCLVG 208
Query: 169 DDMTARVGDFGLARFLPPTRTQTSSIDVKGSIGYIAPEYGVGNEVSTIGDVYSYGILLLE 228
++M ++ DFGL+R + + + I ++ PE N +T DV++YG++L E
Sbjct: 209 ENMVVKIADFGLSRNIYSADYYKADGNDAIPIRWMPPESIFYNRYTTESDVWAYGVVLWE 268
Query: 229 LM 230
+
Sbjct: 269 IF 270
>pdb|3KVX|A Chain A, Jnk3 Bound To Aminopyrimidine Inhibitor, Sr-3562
Length = 364
Score = 42.0 bits (97), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 30/86 (34%), Positives = 45/86 (52%), Gaps = 7/86 (8%)
Query: 157 HCVLKPSNVLLDDDMTARVGDFGLARFLPPTRTQTSSIDVKGSIGYIAPEYGVGNEVSTI 216
H LKPSN+++ D T ++ DFGLAR + T + + Y APE +G
Sbjct: 149 HRDLKPSNIVVKSDXTLKILDFGLARTAGTSFMMTPYVVTR---YYRAPEVILGMGYKEN 205
Query: 217 GDVYSYGILLLELMIREKPSDIMFEG 242
D++S G ++ E M+R K I+F G
Sbjct: 206 VDIWSVGCIMGE-MVRHK---ILFPG 227
>pdb|1F3M|C Chain C, Crystal Structure Of Human SerineTHREONINE KINASE PAK1
pdb|1F3M|D Chain D, Crystal Structure Of Human SerineTHREONINE KINASE PAK1
pdb|1YHW|A Chain A, Crystal Structure Of Pak1 Kinase Domain With One Point
Mutations (K299r)
Length = 297
Score = 42.0 bits (97), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 26/93 (27%), Positives = 48/93 (51%), Gaps = 5/93 (5%)
Query: 143 ALNYLHHDCQPVTAHCVLKPSNVLLDDDMTARVGDFGLARFLPPTRTQTSSIDVKGSIGY 202
AL +LH + H +K N+LL D + ++ DFG + P +++ S++ G+ +
Sbjct: 128 ALEFLHSN---QVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQSKRSTM--VGTPYW 182
Query: 203 IAPEYGVGNEVSTIGDVYSYGILLLELMIREKP 235
+APE D++S GI+ +E++ E P
Sbjct: 183 MAPEVVTRKAYGPKVDIWSLGIMAIEMIEGEPP 215
>pdb|2R9S|A Chain A, C-Jun N-Terminal Kinase 3 With 3,5-Disubstituted Quinoline
Inhibitor
pdb|2R9S|B Chain B, C-Jun N-Terminal Kinase 3 With 3,5-Disubstituted Quinoline
Inhibitor
Length = 356
Score = 42.0 bits (97), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 30/86 (34%), Positives = 45/86 (52%), Gaps = 7/86 (8%)
Query: 157 HCVLKPSNVLLDDDMTARVGDFGLARFLPPTRTQTSSIDVKGSIGYIAPEYGVGNEVSTI 216
H LKPSN+++ D T ++ DFGLAR + T + + Y APE +G
Sbjct: 142 HRDLKPSNIVVKSDXTLKILDFGLARTAGTSFMMTPYVVTR---YYRAPEVILGMGYKEN 198
Query: 217 GDVYSYGILLLELMIREKPSDIMFEG 242
D++S G ++ E M+R K I+F G
Sbjct: 199 VDIWSVGCIMGE-MVRHK---ILFPG 220
>pdb|3FI3|A Chain A, Crystal Structure Of Jnk3 With Indazole Inhibitor, Sr-3737
Length = 364
Score = 42.0 bits (97), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 30/86 (34%), Positives = 45/86 (52%), Gaps = 7/86 (8%)
Query: 157 HCVLKPSNVLLDDDMTARVGDFGLARFLPPTRTQTSSIDVKGSIGYIAPEYGVGNEVSTI 216
H LKPSN+++ D T ++ DFGLAR + T + + Y APE +G
Sbjct: 149 HRDLKPSNIVVKSDXTLKILDFGLARTAGTSFMMTPYVVTR---YYRAPEVILGMGYKEN 205
Query: 217 GDVYSYGILLLELMIREKPSDIMFEG 242
D++S G ++ E M+R K I+F G
Sbjct: 206 VDIWSVGCIMGE-MVRHK---ILFPG 227
>pdb|1YHV|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Two Point
Mutations (K299r, T423e)
pdb|2HY8|1 Chain 1, Pak1 Complex With St2001
Length = 297
Score = 42.0 bits (97), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 26/93 (27%), Positives = 48/93 (51%), Gaps = 5/93 (5%)
Query: 143 ALNYLHHDCQPVTAHCVLKPSNVLLDDDMTARVGDFGLARFLPPTRTQTSSIDVKGSIGY 202
AL +LH + H +K N+LL D + ++ DFG + P +++ S ++ G+ +
Sbjct: 128 ALEFLHSN---QVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQSKRS--EMVGTPYW 182
Query: 203 IAPEYGVGNEVSTIGDVYSYGILLLELMIREKP 235
+APE D++S GI+ +E++ E P
Sbjct: 183 MAPEVVTRKAYGPKVDIWSLGIMAIEMIEGEPP 215
>pdb|2R4B|A Chain A, Erbb4 Kinase Domain Complexed With A Thienopyrimidine
Inhibitor
pdb|2R4B|B Chain B, Erbb4 Kinase Domain Complexed With A Thienopyrimidine
Inhibitor
Length = 321
Score = 42.0 bits (97), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 43/177 (24%), Positives = 74/177 (41%), Gaps = 19/177 (10%)
Query: 62 SFIAECKALRNIRHRNLIKVLTACLGVDYQGNDFKALVYEFMHNRSLKEWLYPISKEDET 121
F+ E + ++ H +L+++L CL Q LV + M + L E+++
Sbjct: 86 EFMDEALIMASMDHPHLVRLLGVCLSPTIQ------LVTQLMPHGCLLEYVH-------- 131
Query: 122 YKRPXXXXXXXXXXIAIDVASALNYLHHDCQPVTAHCVLKPSNVLLDDDMTARVGDFGLA 181
+ + +A + YL + H L NVL+ ++ DFGLA
Sbjct: 132 -EHKDNIGSQLLLNWCVQIAKGMMYLE---ERRLVHRDLAARNVLVKSPNHVKITDFGLA 187
Query: 182 RFLPPTRTQTSSIDVKGSIGYIAPEYGVGNEVSTIGDVYSYGILLLELM-IREKPSD 237
R L + ++ K I ++A E + + DV+SYG+ + ELM KP D
Sbjct: 188 RLLEGDEKEYNADGGKMPIKWMALECIHYRKFTHQSDVWSYGVTIWELMTFGGKPYD 244
>pdb|3LW0|A Chain A, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|B Chain B, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|C Chain C, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|D Chain D, Igf-1rk In Complex With Ligand Msc1609119a-1
Length = 304
Score = 42.0 bits (97), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 38/174 (21%), Positives = 75/174 (43%), Gaps = 9/174 (5%)
Query: 63 FIAECKALRNIRHRNLIKVLTACLGVDYQGNDFKALVYEFMHNRSLKEWLYPISKEDETY 122
F+ E ++ +++++L GV QG ++ E M LK +L +
Sbjct: 65 FLNEASVMKEFNCHHVVRLL----GVVSQGQP-TLVIMELMTRGDLKSYLRSLRPAMANN 119
Query: 123 KRPXXXXXXXXXXIAIDVASALNYLHHDCQPVTAHCVLKPSNVLLDDDMTARVGDFGLAR 182
+A ++A + YL+ + H L N ++ +D T ++GDFG+ R
Sbjct: 120 PVLAPPSLSKMIQMAGEIADGMAYLNANK---FVHRDLAARNCMVAEDFTVKIGDFGMTR 176
Query: 183 FLPPTRTQTSSIDVKGSIGYIAPEYGVGNEVSTIGDVYSYGILLLEL-MIREKP 235
+ T + +++PE +T DV+S+G++L E+ + E+P
Sbjct: 177 DIYETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQP 230
>pdb|3FE3|A Chain A, Crystal Structure Of The Kinase Mark3PAR-1: T211a-S215a
Double Mutant
pdb|3FE3|B Chain B, Crystal Structure Of The Kinase Mark3PAR-1: T211a-S215a
Double Mutant
Length = 328
Score = 42.0 bits (97), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 33/100 (33%), Positives = 46/100 (46%), Gaps = 9/100 (9%)
Query: 140 VASALNYLHHDCQPVTAHCVLKPSNVLLDDDMTARVGDFGLARFLPPTRTQTSSIDVK-G 198
+ SA+ Y H Q H LK N+LLD DM ++ DFG + T +D G
Sbjct: 123 IVSAVQYCH---QKRIVHRDLKAENLLLDADMNIKIADFGFSNEF----TVGGKLDAFCG 175
Query: 199 SIGYIAPEYGVGNEVSTIG-DVYSYGILLLELMIREKPSD 237
+ Y APE G + DV+S G++L L+ P D
Sbjct: 176 APPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFD 215
>pdb|3GBZ|A Chain A, Structure Of The Cmgc Cdk Kinase From Giardia Lamblia
pdb|3GC0|A Chain A, Structure Of The Cmgc Cdk Kinase From Giardia Lamblia In
Complex With Amp
Length = 329
Score = 42.0 bits (97), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 51/204 (25%), Positives = 90/204 (44%), Gaps = 35/204 (17%)
Query: 57 QGAFKSFIAECKALRNIRHRNLIKVLTACLGVDYQGNDFKALVYEFMHNRSLKEWLYPIS 116
+G + I E L+ ++HRN+I++ + N L++E+ N LK+++
Sbjct: 74 EGVPGTAIREVSLLKELQHRNIIELKSVI-----HHNHRLHLIFEYAEN-DLKKYM---D 124
Query: 117 KEDETYKRPXXXXXXXXXXIAIDVASALNYLH-HDCQPVTAHCVLKPSNVLL-----DDD 170
K + R + + +N+ H C H LKP N+LL +
Sbjct: 125 KNPDVSMR-------VIKSFLYQLINGVNFCHSRRC----LHRDLKPQNLLLSVSDASET 173
Query: 171 MTARVGDFGLAR-FLPPTRTQTSSIDVKGSIGYIAPEYGVGN-EVSTIGDVYSYGILLLE 228
++GDFGLAR F P R T I ++ Y PE +G+ ST D++S + E
Sbjct: 174 PVLKIGDFGLARAFGIPIRQFTHEII---TLWYRPPEILLGSRHYSTSVDIWSIACIWAE 230
Query: 229 LMIREKPSDIMFEGDMNLHKFAKM 252
++++ +F GD + + K+
Sbjct: 231 MLMKTP----LFPGDSEIDQLFKI 250
>pdb|2PZR|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K641r Mutation Responsible For
Pfeiffer Syndrome
pdb|2PZR|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K641r Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 42.0 bits (97), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 44/183 (24%), Positives = 80/183 (43%), Gaps = 33/183 (18%)
Query: 63 FIAECKALRNI-RHRNLIKVLTACLGVDYQGNDFKALVYEFMHNRSLKEWL--------- 112
++E + ++ I +H+N+I +L AC Q +V E+ +L+E+L
Sbjct: 87 LVSEMEMMKMIGKHKNIINLLGACT----QDGPLYVIV-EYASKGNLREYLRARRPPGME 141
Query: 113 --YPISK---EDETYKRPXXXXXXXXXXIAIDVASALNYL-HHDCQPVTAHCVLKPSNVL 166
Y I++ E T+K +A + YL C H L NVL
Sbjct: 142 YSYDINRVPEEQMTFK--------DLVSCTYQLARGMEYLASQKC----IHRDLAARNVL 189
Query: 167 LDDDMTARVGDFGLARFLPPTRTQTSSIDVKGSIGYIAPEYGVGNEVSTIGDVYSYGILL 226
+ ++ R+ DFGLAR + + + + + ++APE + DV+S+G+L+
Sbjct: 190 VTENNVMRIADFGLARDINNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLM 249
Query: 227 LEL 229
E+
Sbjct: 250 WEI 252
>pdb|3PTG|A Chain A, Design And Synthesis Of A Novel, Orally Efficacious
Tri-Substituted Thiophene Based Jnk Inhibitor
Length = 363
Score = 42.0 bits (97), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 30/86 (34%), Positives = 45/86 (52%), Gaps = 7/86 (8%)
Query: 157 HCVLKPSNVLLDDDMTARVGDFGLARFLPPTRTQTSSIDVKGSIGYIAPEYGVGNEVSTI 216
H LKPSN+++ D T ++ DFGLAR + T + + Y APE +G
Sbjct: 149 HRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMTPYVVTR---YYRAPEVILGMGYKEN 205
Query: 217 GDVYSYGILLLELMIREKPSDIMFEG 242
D++S G ++ E M+R K I+F G
Sbjct: 206 VDIWSVGCIMGE-MVRHK---ILFPG 227
>pdb|3OXI|A Chain A, Design And Synthesis Of Disubstituted Thiophene And
Thiazole Based Inhibitors Of Jnk For The Treatment Of
Neurodegenerative Diseases
pdb|3OY1|A Chain A, Highly Selective C-Jun N-Terminal Kinase (Jnk) 2 And 3
Inhibitors With In Vitro Cns-Like Pharmacokinetic
Properties
Length = 362
Score = 41.6 bits (96), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 30/86 (34%), Positives = 45/86 (52%), Gaps = 7/86 (8%)
Query: 157 HCVLKPSNVLLDDDMTARVGDFGLARFLPPTRTQTSSIDVKGSIGYIAPEYGVGNEVSTI 216
H LKPSN+++ D T ++ DFGLAR + T + + Y APE +G
Sbjct: 148 HRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMTPYVVTR---YYRAPEVILGMGYKEN 204
Query: 217 GDVYSYGILLLELMIREKPSDIMFEG 242
D++S G ++ E M+R K I+F G
Sbjct: 205 VDIWSVGCIMGE-MVRHK---ILFPG 226
>pdb|2O0U|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-{3-Cyano-6-[3-(1-
Piperidinyl)propanoyl]-4,5,6,7-Tetrahydrothieno[2,
3-C]pyridin-2-Yl}- 1-Naphthalenecarboxamide
pdb|2O2U|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-(3-Cyano-4,5,6,7-
Tetrahydro-1-Benzothien-2-Yl)-2-Fluorobenzamide
pdb|2ZDT|A Chain A, Crystal Structure Of Human Jnk3 Complexed With An
Isoquinolone Inhibitor
pdb|2ZDU|A Chain A, Crystal Structure Of Human Jnk3 Complexed With An
Isoquinolone Inhibitor
pdb|3DA6|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-(3-Methyl-
4-(3-(2-(Methylamino)pyrimidin-4-Yl)pyridin-2-Yloxy)
Naphthalen-1-Yl)-1h-Benzo[d]imidazol-2-Amine
pdb|2WAJ|A Chain A, Crystal Structure Of Human Jnk3 Complexed With A
1-Aryl-3,4- Dihydroisoquinoline Inhibitor
pdb|3V6R|A Chain A, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6R|B Chain B, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6S|A Chain A, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6S|B Chain B, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
Length = 364
Score = 41.6 bits (96), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 30/86 (34%), Positives = 45/86 (52%), Gaps = 7/86 (8%)
Query: 157 HCVLKPSNVLLDDDMTARVGDFGLARFLPPTRTQTSSIDVKGSIGYIAPEYGVGNEVSTI 216
H LKPSN+++ D T ++ DFGLAR + T + + Y APE +G
Sbjct: 149 HRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMTPYVVTR---YYRAPEVILGMGYKEN 205
Query: 217 GDVYSYGILLLELMIREKPSDIMFEG 242
D++S G ++ E M+R K I+F G
Sbjct: 206 VDIWSVGCIMGE-MVRHK---ILFPG 227
>pdb|1JNK|A Chain A, The C-Jun N-Terminal Kinase (Jnk3s) Complexed With
Mgamp-Pnp
Length = 423
Score = 41.6 bits (96), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 30/86 (34%), Positives = 45/86 (52%), Gaps = 7/86 (8%)
Query: 157 HCVLKPSNVLLDDDMTARVGDFGLARFLPPTRTQTSSIDVKGSIGYIAPEYGVGNEVSTI 216
H LKPSN+++ D T ++ DFGLAR + T + + Y APE +G
Sbjct: 187 HRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMTPYVVTR---YYRAPEVILGMGYKEN 243
Query: 217 GDVYSYGILLLELMIREKPSDIMFEG 242
D++S G ++ E M+R K I+F G
Sbjct: 244 VDIWSVGCIMGE-MVRHK---ILFPG 265
>pdb|2BR1|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRB|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRG|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRH|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRM|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRN|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRO|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2C3J|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2C3K|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2C3L|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2CGU|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGV|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGW|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGX|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|3NLB|A Chain A, Novel Kinase Profile Highlights The Temporal Basis Of
Context Dependent Checkpoint Pathways To Cell Death
Length = 297
Score = 41.6 bits (96), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 27/83 (32%), Positives = 42/83 (50%), Gaps = 1/83 (1%)
Query: 156 AHCVLKPSNVLLDDDMTARVGDFGLARFLPPTRTQTSSIDVKGSIGYIAPEYGVGNEV-S 214
H +KP N+LLD+ ++ DFGLA + + G++ Y+APE E +
Sbjct: 127 THRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHA 186
Query: 215 TIGDVYSYGILLLELMIREKPSD 237
DV+S GI+L ++ E P D
Sbjct: 187 EPVDVWSCGIVLTAMLAGELPWD 209
>pdb|1IA8|A Chain A, The 1.7 A Crystal Structure Of Human Cell Cycle Checkpoint
Kinase Chk1
pdb|1NVQ|A Chain A, The Complex Structure Of Checkpoint Kinase Chk1UCN-01
pdb|1NVR|A Chain A, The Complex Structure Of Checkpoint Kinase
Chk1STAUROSPORINE
pdb|1NVS|A Chain A, The Complex Structure Of Checkpoint Kinase Chk1SB218078
pdb|2WMQ|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMR|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMS|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMT|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMU|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMV|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMX|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMW|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XEY|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XF0|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XEZ|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2X8D|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2X8I|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2YM3|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM4|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM5|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM6|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM7|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM8|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YDI|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 289
Score = 41.6 bits (96), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 27/83 (32%), Positives = 42/83 (50%), Gaps = 1/83 (1%)
Query: 156 AHCVLKPSNVLLDDDMTARVGDFGLARFLPPTRTQTSSIDVKGSIGYIAPEYGVGNEV-S 214
H +KP N+LLD+ ++ DFGLA + + G++ Y+APE E +
Sbjct: 127 THRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHA 186
Query: 215 TIGDVYSYGILLLELMIREKPSD 237
DV+S GI+L ++ E P D
Sbjct: 187 EPVDVWSCGIVLTAMLAGELPWD 209
>pdb|2OK1|A Chain A, Crystal Structure Of Jnk3 Bound To N-Benzyl-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|2P33|A Chain A, Synthesis And Sar Of Aminopyrimidines As Novel C-Jun N-
Terminal Kinase (Jnk) Inhibitors
pdb|3CGF|A Chain A, Irak-4 Inhibitors (Part Ii)- A Structure Based Assessment
Of Imidazo[1,2 A]pyridine Binding
pdb|3CGO|A Chain A, Irak-4 Inhibitors (Part Ii)- A Structure Based Assessment
Of Imidazo[1,2 A]pyridine Binding
pdb|3G90|X Chain X, Jnk-3 Bound To
(Z)-5-Fluoro-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)
Methyl)-3-(Hydroxyimino)indolin-2-One
pdb|3G9N|A Chain A, Jnk3 Bound To
(Z)-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)methyl)-3-
(Hydroxyimino)-4-Phenylindolin-2-One
pdb|3G9L|X Chain X, Jnk3 Bound To
(Z)-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)methyl)-3-
(Hydroxyimino)-4-Styrylindolin-2-One
Length = 365
Score = 41.6 bits (96), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 30/86 (34%), Positives = 45/86 (52%), Gaps = 7/86 (8%)
Query: 157 HCVLKPSNVLLDDDMTARVGDFGLARFLPPTRTQTSSIDVKGSIGYIAPEYGVGNEVSTI 216
H LKPSN+++ D T ++ DFGLAR + T + + Y APE +G
Sbjct: 150 HRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMTPYVVTR---YYRAPEVILGMGYKEN 206
Query: 217 GDVYSYGILLLELMIREKPSDIMFEG 242
D++S G ++ E M+R K I+F G
Sbjct: 207 VDIWSVGCIMGE-MVRHK---ILFPG 228
>pdb|1ZLT|A Chain A, Crystal Structure Of Chk1 Complexed With A Hymenaldisine
Analog
pdb|2GDO|A Chain A, 4-(aminoalkylamino)-3-benzimidazole-quinolinones As Potent
Chk1 Inhibitors
Length = 295
Score = 41.6 bits (96), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 27/83 (32%), Positives = 42/83 (50%), Gaps = 1/83 (1%)
Query: 156 AHCVLKPSNVLLDDDMTARVGDFGLARFLPPTRTQTSSIDVKGSIGYIAPEYGVGNEV-S 214
H +KP N+LLD+ ++ DFGLA + + G++ Y+APE E +
Sbjct: 127 THRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHA 186
Query: 215 TIGDVYSYGILLLELMIREKPSD 237
DV+S GI+L ++ E P D
Sbjct: 187 EPVDVWSCGIVLTAMLAGELPWD 209
>pdb|1PMN|A Chain A, Crystal Structure Of Jnk3 In Complex With An Imidazole-
Pyrimidine Inhibitor
pdb|1PMQ|A Chain A, The Structure Of Jnk3 In Complex With An Imidazole-
Pyrimidine Inhibitor
pdb|1PMU|A Chain A, The Crystal Structure Of Jnk3 In Complex With A
Phenantroline Inhibitor
pdb|1PMV|A Chain A, The Structure Of Jnk3 In Complex With A
Dihydroanthrapyrazole Inhibitor
Length = 364
Score = 41.6 bits (96), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 30/86 (34%), Positives = 45/86 (52%), Gaps = 7/86 (8%)
Query: 157 HCVLKPSNVLLDDDMTARVGDFGLARFLPPTRTQTSSIDVKGSIGYIAPEYGVGNEVSTI 216
H LKPSN+++ D T ++ DFGLAR + T + + Y APE +G
Sbjct: 150 HRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMTPYVVTR---YYRAPEVILGMGYKEN 206
Query: 217 GDVYSYGILLLELMIREKPSDIMFEG 242
D++S G ++ E M+R K I+F G
Sbjct: 207 VDIWSVGCIMGE-MVRHK---ILFPG 228
>pdb|2B1P|A Chain A, Inhibitor Complex Of Jnk3
Length = 355
Score = 41.6 bits (96), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 30/86 (34%), Positives = 45/86 (52%), Gaps = 7/86 (8%)
Query: 157 HCVLKPSNVLLDDDMTARVGDFGLARFLPPTRTQTSSIDVKGSIGYIAPEYGVGNEVSTI 216
H LKPSN+++ D T ++ DFGLAR + T + + Y APE +G
Sbjct: 142 HRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMTPYVVTR---YYRAPEVILGMGYKEN 198
Query: 217 GDVYSYGILLLELMIREKPSDIMFEG 242
D++S G ++ E M+R K I+F G
Sbjct: 199 VDIWSVGCIMGE-MVRHK---ILFPG 220
>pdb|4H36|A Chain A, Crystal Structure Of Jnk3 In Complex With Atf2 Peptide
pdb|4H39|A Chain A, Crystal Structure Of Jnk3 In Complex With Jip1 Peptide
pdb|4H3B|A Chain A, Crystal Structure Of Jnk3 In Complex With Sab Peptide
pdb|4H3B|C Chain C, Crystal Structure Of Jnk3 In Complex With Sab Peptide
Length = 356
Score = 41.6 bits (96), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 30/86 (34%), Positives = 45/86 (52%), Gaps = 7/86 (8%)
Query: 157 HCVLKPSNVLLDDDMTARVGDFGLARFLPPTRTQTSSIDVKGSIGYIAPEYGVGNEVSTI 216
H LKPSN+++ D T ++ DFGLAR + T + + Y APE +G
Sbjct: 143 HRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMTPYVVTR---YYRAPEVILGMGYKEN 199
Query: 217 GDVYSYGILLLELMIREKPSDIMFEG 242
D++S G ++ E M+R K I+F G
Sbjct: 200 VDIWSVGCIMGE-MVRHK---ILFPG 221
>pdb|2EXC|X Chain X, Inhibitor Complex Of Jnk3
Length = 356
Score = 41.6 bits (96), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 30/86 (34%), Positives = 45/86 (52%), Gaps = 7/86 (8%)
Query: 157 HCVLKPSNVLLDDDMTARVGDFGLARFLPPTRTQTSSIDVKGSIGYIAPEYGVGNEVSTI 216
H LKPSN+++ D T ++ DFGLAR + T + + Y APE +G
Sbjct: 143 HRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMTPYVVTR---YYRAPEVILGMGYKEN 199
Query: 217 GDVYSYGILLLELMIREKPSDIMFEG 242
D++S G ++ E M+R K I+F G
Sbjct: 200 VDIWSVGCIMGE-MVRHK---ILFPG 221
>pdb|3SA0|A Chain A, Complex Of Erk2 With Norathyriol
pdb|4FUY|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek2
pdb|4FV0|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek3
Length = 360
Score = 41.6 bits (96), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 38/127 (29%), Positives = 59/127 (46%), Gaps = 15/127 (11%)
Query: 140 VASALNYLHHDCQPVTAHCVLKPSNVLLDDDMTARVGDFGLARFLPPTRTQTSSI-DVKG 198
+ L Y+H H LKPSN+LL+ ++ DFGLAR P T + +
Sbjct: 133 ILRGLKYIH---SANVLHRDLKPSNLLLNTTXDLKIXDFGLARVADPDHDHTGFLTEYVA 189
Query: 199 SIGYIAPEYGVGNEVSTIG-DVYSYGILLLELMIREKPSDIMFEGDMNLHKFAKMALSNH 257
+ Y APE + ++ T D++S G +L E M+ +P +F G L + NH
Sbjct: 190 TRWYRAPEIMLNSKGYTKSIDIWSVGCILAE-MLSNRP---IFPGKHYLDQL------NH 239
Query: 258 VKDIVDS 264
+ I+ S
Sbjct: 240 ILGILGS 246
>pdb|3TTJ|A Chain A, Crystal Structure Of Jnk3 Complexed With Cc-359, A Jnk
Inhibitor For The Prevention Of Ischemia-Reperfusion
Injury
pdb|3TTI|A Chain A, Crystal Structure Of Jnk3 Complexed With Cc-930, An Orally
Active Anti-Fibrotic Jnk Inhibitor
Length = 464
Score = 41.6 bits (96), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 30/86 (34%), Positives = 45/86 (52%), Gaps = 7/86 (8%)
Query: 157 HCVLKPSNVLLDDDMTARVGDFGLARFLPPTRTQTSSIDVKGSIGYIAPEYGVGNEVSTI 216
H LKPSN+++ D T ++ DFGLAR + T + + Y APE +G
Sbjct: 187 HRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMTPYVVTR---YYRAPEVILGMGYKEN 243
Query: 217 GDVYSYGILLLELMIREKPSDIMFEG 242
D++S G ++ E M+R K I+F G
Sbjct: 244 VDIWSVGCIMGE-MVRHK---ILFPG 265
>pdb|2C30|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 6
Length = 321
Score = 41.6 bits (96), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 55/234 (23%), Positives = 104/234 (44%), Gaps = 25/234 (10%)
Query: 54 LRRQGAFKSFIAECKALRNIRHRNLIKVLTACLGVDYQGNDFKALVYEFMHNRSLKEWLY 113
LR+Q + E +R+ +H N++++ + L G + L+ EF+ +L + +
Sbjct: 80 LRKQQRRELLFNEVVIMRDYQHFNVVEMYKSYL----VGEELWVLM-EFLQGGALTDIVS 134
Query: 114 PISKEDETYKRPXXXXXXXXXXIAIDVASALNYLHHDCQPVTAHCVLKPSNVLLDDDMTA 173
+ +E + V AL YLH Q V H +K ++LL D
Sbjct: 135 QVRLNEEQ-----------IATVCEAVLQALAYLH--AQGVI-HRDIKSDSILLTLDGRV 180
Query: 174 RVGDFGLARFLPPTRTQTSSIDVKGSIGYIAPEYGVGNEVSTIGDVYSYGILLLELMIRE 233
++ DFG + ++ + G+ ++APE + +T D++S GI+++E++ E
Sbjct: 181 KLSDFGFCAQI--SKDVPKRKXLVGTPYWMAPEVISRSLYATEVDIWSLGIMVIEMVDGE 238
Query: 234 KP--SDIMFEGDMNLHKFAKMALSNHVKDIVDSILLNDDEKLVVRGDQKQTQAK 285
P SD + L L N K V +L + E+++VR Q++ A+
Sbjct: 239 PPYFSDSPVQAMKRLRDSPPPKLKNSHK--VSPVLRDFLERMLVRDPQERATAQ 290
>pdb|2R0U|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 54
pdb|2QHM|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 2a
pdb|2QHN|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 1a
pdb|3TKH|A Chain A, Crystal Structure Of Chk1 In Complex With Inhibitor S01
pdb|3TKI|A Chain A, Crystal Structure Of Chk1 In Complex With Inhibitor S25
Length = 323
Score = 41.6 bits (96), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 27/83 (32%), Positives = 42/83 (50%), Gaps = 1/83 (1%)
Query: 156 AHCVLKPSNVLLDDDMTARVGDFGLARFLPPTRTQTSSIDVKGSIGYIAPEYGVGNEV-S 214
H +KP N+LLD+ ++ DFGLA + + G++ Y+APE E +
Sbjct: 127 THRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHA 186
Query: 215 TIGDVYSYGILLLELMIREKPSD 237
DV+S GI+L ++ E P D
Sbjct: 187 EPVDVWSCGIVLTAMLAGELPWD 209
>pdb|3QYW|A Chain A, Crystal Structure Of Erk2 In Complex With An Inhibitor
pdb|3QYZ|A Chain A, Crystal Structure Of Erk2 In Complex With An Inhibitor
pdb|4GT3|A Chain A, Atp-Bound Form Of The Erk2 Kinase
pdb|4GVA|A Chain A, Adp-Bound Form Of The Erk2 Kinase
Length = 364
Score = 41.6 bits (96), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 38/127 (29%), Positives = 59/127 (46%), Gaps = 15/127 (11%)
Query: 140 VASALNYLHHDCQPVTAHCVLKPSNVLLDDDMTARVGDFGLARFLPPTRTQTSSI-DVKG 198
+ L Y+H H LKPSN+LL+ ++ DFGLAR P T + +
Sbjct: 137 ILRGLKYIH---SANVLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLTEYVA 193
Query: 199 SIGYIAPEYGVGNEVSTIG-DVYSYGILLLELMIREKPSDIMFEGDMNLHKFAKMALSNH 257
+ Y APE + ++ T D++S G +L E M+ +P +F G L + NH
Sbjct: 194 TRWYRAPEIMLNSKGYTKSIDIWSVGCILAE-MLSNRP---IFPGKHYLDQL------NH 243
Query: 258 VKDIVDS 264
+ I+ S
Sbjct: 244 ILGILGS 250
>pdb|1YWN|A Chain A, Vegfr2 In Complex With A Novel
4-amino-furo[2,3-d]pyrimidine
Length = 316
Score = 41.6 bits (96), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 48/184 (26%), Positives = 81/184 (44%), Gaps = 28/184 (15%)
Query: 61 KSFIAECKALRNIRHR-NLIKVLTACLGVDYQGNDFKALVYEFMHNRSLKEWL------- 112
++ ++E K L +I H N++ +L AC G +V EF +L +L
Sbjct: 75 RALMSELKILIHIGHHLNVVNLLGACTK---PGGPLMVIV-EFCKFGNLSTYLRSKRNEF 130
Query: 113 --YPISKEDETYKRPXXXXXXXXXXIAIDVASALNYLHHDCQPVTAHCV---LKPSNVLL 167
Y ++ ED YK + VA + +L + C+ L N+LL
Sbjct: 131 VPYKVAPED-LYK--DFLTLEHLICYSFQVAKGMEFL------ASRKCIHRDLAARNILL 181
Query: 168 DDDMTARVGDFGLARFLPPTRTQTSSIDVKGSIGYIAPEYGVGNEVSTI-GDVYSYGILL 226
+ ++ DFGLAR + D + + ++APE + + V TI DV+S+G+LL
Sbjct: 182 SEKNVVKICDFGLARDIXKDPDXVRKGDARLPLKWMAPE-TIFDRVYTIQSDVWSFGVLL 240
Query: 227 LELM 230
E+
Sbjct: 241 WEIF 244
>pdb|3ENM|A Chain A, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|B Chain B, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|C Chain C, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|D Chain D, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
Length = 316
Score = 41.6 bits (96), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 35/107 (32%), Positives = 52/107 (48%), Gaps = 11/107 (10%)
Query: 136 IAIDVASALNYLHHDCQPVTAHCVLKPSNVLLDDDMTARVGDFGLARFLPPTRTQTSSID 195
IA+ + AL +LH + H +KPSNVL++ + DFG++ +L ID
Sbjct: 141 IAVSIVKALEHLHSKLSVI--HRDVKPSNVLINALGQVKXCDFGISGYL--VDDVAKDID 196
Query: 196 VKGSIGYIAPEYGVGNEVSTIG-----DVYSYGILLLELMIREKPSD 237
G Y APE + E++ G D++S GI +EL I P D
Sbjct: 197 A-GCKPYXAPER-INPELNQKGYSVKSDIWSLGITXIELAILRFPYD 241
>pdb|1P4O|A Chain A, Structure Of Apo Unactivated Igf-1r Kinase Domain At 1.5a
Resolution.
pdb|1P4O|B Chain B, Structure Of Apo Unactivated Igf-1r Kinase Domain At 1.5a
Resolution
Length = 322
Score = 41.6 bits (96), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 38/174 (21%), Positives = 75/174 (43%), Gaps = 9/174 (5%)
Query: 63 FIAECKALRNIRHRNLIKVLTACLGVDYQGNDFKALVYEFMHNRSLKEWLYPISKEDETY 122
F+ E ++ +++++L GV QG ++ E M LK +L +
Sbjct: 75 FLNEASVMKEFNCHHVVRLL----GVVSQGQP-TLVIMELMTRGDLKSYLRSLRPAMANN 129
Query: 123 KRPXXXXXXXXXXIAIDVASALNYLHHDCQPVTAHCVLKPSNVLLDDDMTARVGDFGLAR 182
+A ++A + YL+ + H L N ++ +D T ++GDFG+ R
Sbjct: 130 PVLAPPSLSKMIQMAGEIADGMAYLNANK---FVHRDLAARNCMVAEDFTVKIGDFGMTR 186
Query: 183 FLPPTRTQTSSIDVKGSIGYIAPEYGVGNEVSTIGDVYSYGILLLEL-MIREKP 235
+ T + +++PE +T DV+S+G++L E+ + E+P
Sbjct: 187 DIYETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQP 240
>pdb|2HOG|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 20
pdb|2HXL|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 1
pdb|2HXQ|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 2
pdb|2HY0|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 22
pdb|3F9N|A Chain A, Crystal Structure Of Chk1 Kinase In Complex With Inhibitor
38
Length = 322
Score = 41.6 bits (96), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 27/83 (32%), Positives = 42/83 (50%), Gaps = 1/83 (1%)
Query: 156 AHCVLKPSNVLLDDDMTARVGDFGLARFLPPTRTQTSSIDVKGSIGYIAPEYGVGNEV-S 214
H +KP N+LLD+ ++ DFGLA + + G++ Y+APE E +
Sbjct: 126 THRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHA 185
Query: 215 TIGDVYSYGILLLELMIREKPSD 237
DV+S GI+L ++ E P D
Sbjct: 186 EPVDVWSCGIVLTAMLAGELPWD 208
>pdb|1V0B|A Chain A, Crystal Structure Of The T198a Mutant Of Pfpk5
pdb|1V0B|B Chain B, Crystal Structure Of The T198a Mutant Of Pfpk5
Length = 288
Score = 41.6 bits (96), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 26/76 (34%), Positives = 44/76 (57%), Gaps = 5/76 (6%)
Query: 157 HCVLKPSNVLLDDDMTARVGDFGLAR-FLPPTRTQTSSIDVKGSIGYIAPEYGVGN-EVS 214
H LKP N+L++ + ++ DFGLAR F P R T + ++ Y AP+ +G+ + S
Sbjct: 123 HRDLKPQNLLINREGELKIADFGLARAFGIPVRKYTHEV---VTLWYRAPDVLMGSKKYS 179
Query: 215 TIGDVYSYGILLLELM 230
T D++S G + E++
Sbjct: 180 TTIDIWSVGCIFAEMV 195
>pdb|2PVF|A Chain A, Crystal Structure Of Tyrosine Phosphorylated Activated Fgf
Receptor 2 (Fgfr2) Kinase Domain In Complex With Atp
Analog And Substrate Peptide
Length = 334
Score = 41.6 bits (96), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 43/186 (23%), Positives = 80/186 (43%), Gaps = 33/186 (17%)
Query: 60 FKSFIAECKALRNI-RHRNLIKVLTACLGVDYQGNDFKALVYEFMHNRSLKEWL------ 112
++E + ++ I +H+N+I +L AC Q +V E+ +L+E+L
Sbjct: 84 LSDLVSEMEMMKMIGKHKNIINLLGACT----QDGPLYVIV-EYASKGNLREYLRARRPP 138
Query: 113 -----YPISK---EDETYKRPXXXXXXXXXXIAIDVASALNYL-HHDCQPVTAHCVLKPS 163
Y I++ E T+K +A + YL C H L
Sbjct: 139 GMEXSYDINRVPEEQMTFK--------DLVSCTYQLARGMEYLASQKC----IHRDLAAR 186
Query: 164 NVLLDDDMTARVGDFGLARFLPPTRTQTSSIDVKGSIGYIAPEYGVGNEVSTIGDVYSYG 223
NVL+ ++ ++ DFGLAR + + + + + ++APE + DV+S+G
Sbjct: 187 NVLVTENNVMKIADFGLARDINNIDXXKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFG 246
Query: 224 ILLLEL 229
+L+ E+
Sbjct: 247 VLMWEI 252
>pdb|1V0O|A Chain A, Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulphonate
Ligand Complex
pdb|1V0O|B Chain B, Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulphonate
Ligand Complex
Length = 288
Score = 41.6 bits (96), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 26/76 (34%), Positives = 44/76 (57%), Gaps = 5/76 (6%)
Query: 157 HCVLKPSNVLLDDDMTARVGDFGLAR-FLPPTRTQTSSIDVKGSIGYIAPEYGVGN-EVS 214
H LKP N+L++ + ++ DFGLAR F P R T + ++ Y AP+ +G+ + S
Sbjct: 123 HRDLKPQNLLINREGELKIADFGLARAFGIPVRKYTHEV---VTLWYRAPDVLMGSKKYS 179
Query: 215 TIGDVYSYGILLLELM 230
T D++S G + E++
Sbjct: 180 TTIDIWSVGCIFAEMV 195
>pdb|4FUX|A Chain A, Crystal Structure Of The Erk2 Complexed With E75
pdb|4FV1|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek4
pdb|4FV2|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek5
pdb|4FV3|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek6
pdb|4FV4|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek7
pdb|4FV5|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek9
pdb|4FV8|A Chain A, Crystal Structure Of The Erk2 Complexed With E63
pdb|4FV9|A Chain A, Crystal Structure Of The Erk2 Complexed With E71
pdb|4G6N|A Chain A, Crystal Structure Of The Erk2
Length = 360
Score = 41.6 bits (96), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 38/127 (29%), Positives = 59/127 (46%), Gaps = 15/127 (11%)
Query: 140 VASALNYLHHDCQPVTAHCVLKPSNVLLDDDMTARVGDFGLARFLPPTRTQTSSI-DVKG 198
+ L Y+H H LKPSN+LL+ ++ DFGLAR P T + +
Sbjct: 133 ILRGLKYIH---SANVLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLTEYVA 189
Query: 199 SIGYIAPEYGVGNEVSTIG-DVYSYGILLLELMIREKPSDIMFEGDMNLHKFAKMALSNH 257
+ Y APE + ++ T D++S G +L E M+ +P +F G L + NH
Sbjct: 190 TRWYRAPEIMLNSKGYTKSIDIWSVGCILAE-MLSNRP---IFPGKHYLDQL------NH 239
Query: 258 VKDIVDS 264
+ I+ S
Sbjct: 240 ILGILGS 246
>pdb|2GPH|A Chain A, Docking Motif Interactions In The Map Kinase Erk2
Length = 364
Score = 41.6 bits (96), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 38/127 (29%), Positives = 59/127 (46%), Gaps = 15/127 (11%)
Query: 140 VASALNYLHHDCQPVTAHCVLKPSNVLLDDDMTARVGDFGLARFLPPTRTQTSSI-DVKG 198
+ L Y+H H LKPSN+LL+ ++ DFGLAR P T + +
Sbjct: 137 ILRGLKYIH---SANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVA 193
Query: 199 SIGYIAPEYGVGNEVSTIG-DVYSYGILLLELMIREKPSDIMFEGDMNLHKFAKMALSNH 257
+ Y APE + ++ T D++S G +L E M+ +P +F G L + NH
Sbjct: 194 TRWYRAPEIMLNSKGYTKSIDIWSVGCILAE-MLSNRP---IFPGKHYLDQL------NH 243
Query: 258 VKDIVDS 264
+ I+ S
Sbjct: 244 ILGILGS 250
>pdb|2P2I|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Nicotinamide Inhibitor
pdb|2P2I|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Nicotinamide Inhibitor
pdb|3EFL|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Motesanib
pdb|3EFL|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Motesanib
Length = 314
Score = 41.6 bits (96), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 48/184 (26%), Positives = 81/184 (44%), Gaps = 28/184 (15%)
Query: 61 KSFIAECKALRNIRHR-NLIKVLTACLGVDYQGNDFKALVYEFMHNRSLKEWL------- 112
++ ++E K L +I H N++ +L AC G +V EF +L +L
Sbjct: 66 RALMSELKILIHIGHHLNVVNLLGACTK---PGGPLMVIV-EFCKFGNLSTYLRSKRNEF 121
Query: 113 --YPISKEDETYKRPXXXXXXXXXXIAIDVASALNYLHHDCQPVTAHCV---LKPSNVLL 167
Y ++ ED YK + VA + +L + C+ L N+LL
Sbjct: 122 VPYKVAPED-LYK--DFLTLEHLICYSFQVAKGMEFL------ASRKCIHRDLAARNILL 172
Query: 168 DDDMTARVGDFGLARFLPPTRTQTSSIDVKGSIGYIAPEYGVGNEVSTI-GDVYSYGILL 226
+ ++ DFGLAR + D + + ++APE + + V TI DV+S+G+LL
Sbjct: 173 SEKNVVKICDFGLARDIXKDPDXVRKGDARLPLKWMAPE-TIFDRVYTIQSDVWSFGVLL 231
Query: 227 LELM 230
E+
Sbjct: 232 WEIF 235
>pdb|4AGU|A Chain A, Crystal Structure Of The Human Cdkl1 Kinase Domain
pdb|4AGU|B Chain B, Crystal Structure Of The Human Cdkl1 Kinase Domain
pdb|4AGU|C Chain C, Crystal Structure Of The Human Cdkl1 Kinase Domain
Length = 311
Score = 41.2 bits (95), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 42/169 (24%), Positives = 72/169 (42%), Gaps = 23/169 (13%)
Query: 64 IAECKALRNIRHRNLIKVLTACLGVDYQGNDFKALVYEFMHNRSLKEWLYPISKEDETYK 123
+ E + L+ ++H NL+ +L ++ LV+E+ + L E + Y+
Sbjct: 50 LREIRMLKQLKHPNLVNLLEV-----FRRKRRLHLVFEYCDHTVLHEL--------DRYQ 96
Query: 124 RPXXXXXXXXXXIAIDVASALNYLH-HDCQPVTAHCVLKPSNVLLDDDMTARVGDFGLAR 182
R I A+N+ H H+C H +KP N+L+ ++ DFG AR
Sbjct: 97 R--GVPEHLVKSITWQTLQAVNFCHKHNC----IHRDVKPENILITKHSVIKLCDFGFAR 150
Query: 183 FLPPTRTQTSSIDVKGSIGYIAPEYGVGN-EVSTIGDVYSYGILLLELM 230
L T D + Y +PE VG+ + DV++ G + EL+
Sbjct: 151 LL--TGPSDYYDDEVATRWYRSPELLVGDTQYGPPVDVWAIGCVFAELL 197
>pdb|3CLY|A Chain A, Crystal Structure Of Fgf Receptor 2 (Fgfr2) Kinase Domains
Trapped In Trans-Phosphorylation Reaction
Length = 334
Score = 41.2 bits (95), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 43/184 (23%), Positives = 80/184 (43%), Gaps = 29/184 (15%)
Query: 60 FKSFIAECKALRNI-RHRNLIKVLTACLG-------VDYQGNDFKALVYEFMHNRSLK-- 109
++E + ++ I +H+N+I +L AC V+Y K + E++ R
Sbjct: 84 LSDLVSEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYAS---KGNLREYLRARRPPGM 140
Query: 110 EWLYPISK---EDETYKRPXXXXXXXXXXIAIDVASALNYL-HHDCQPVTAHCVLKPSNV 165
E+ Y I++ E T+K +A + YL C H L NV
Sbjct: 141 EYSYDINRVPEEQMTFK--------DLVSCTYQLARGMEYLASQKC----IHRDLAARNV 188
Query: 166 LLDDDMTARVGDFGLARFLPPTRTQTSSIDVKGSIGYIAPEYGVGNEVSTIGDVYSYGIL 225
L+ ++ ++ DFGLAR + + + + + ++APE + DV+S+G+L
Sbjct: 189 LVTENNVMKIADFGLARDINNIDXXKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVL 248
Query: 226 LLEL 229
+ E+
Sbjct: 249 MWEI 252
>pdb|1GOL|A Chain A, Coordinates Of Rat Map Kinase Erk2 With An Arginine
Mutation At Position 52
Length = 364
Score = 41.2 bits (95), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 38/127 (29%), Positives = 59/127 (46%), Gaps = 15/127 (11%)
Query: 140 VASALNYLHHDCQPVTAHCVLKPSNVLLDDDMTARVGDFGLARFLPPTRTQTSSI-DVKG 198
+ L Y+H H LKPSN+LL+ ++ DFGLAR P T + +
Sbjct: 137 ILRGLKYIH---SANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVA 193
Query: 199 SIGYIAPEYGVGNEVSTIG-DVYSYGILLLELMIREKPSDIMFEGDMNLHKFAKMALSNH 257
+ Y APE + ++ T D++S G +L E M+ +P +F G L + NH
Sbjct: 194 TRWYRAPEIMLNSKGYTKSIDIWSVGCILAE-MLSNRP---IFPGKHYLDQL------NH 243
Query: 258 VKDIVDS 264
+ I+ S
Sbjct: 244 ILGILGS 250
>pdb|3ZU7|A Chain A, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Map Kinase Erk2
Length = 365
Score = 41.2 bits (95), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 38/127 (29%), Positives = 59/127 (46%), Gaps = 15/127 (11%)
Query: 140 VASALNYLHHDCQPVTAHCVLKPSNVLLDDDMTARVGDFGLARFLPPTRTQTSSI-DVKG 198
+ L Y+H H LKPSN+LL+ ++ DFGLAR P T + +
Sbjct: 138 ILRGLKYIH---SANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVA 194
Query: 199 SIGYIAPEYGVGNEVSTIG-DVYSYGILLLELMIREKPSDIMFEGDMNLHKFAKMALSNH 257
+ Y APE + ++ T D++S G +L E M+ +P +F G L + NH
Sbjct: 195 TRWYRAPEIMLNSKGYTKSIDIWSVGCILAE-MLSNRP---IFPGKHYLDQL------NH 244
Query: 258 VKDIVDS 264
+ I+ S
Sbjct: 245 ILGILGS 251
>pdb|2Z7L|A Chain A, Unphosphorylated Mitogen Activated Protein Kinase Erk2 In
Complex With
(4-{[5-Carbamoyl-4-(3-Methylanilino)pyrimidin
2-Yl]amino}phenyl)acetic Acid
Length = 366
Score = 41.2 bits (95), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 38/127 (29%), Positives = 59/127 (46%), Gaps = 15/127 (11%)
Query: 140 VASALNYLHHDCQPVTAHCVLKPSNVLLDDDMTARVGDFGLARFLPPTRTQTSSI-DVKG 198
+ L Y+H H LKPSN+LL+ ++ DFGLAR P T + +
Sbjct: 139 ILRGLKYIH---SANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVA 195
Query: 199 SIGYIAPEYGVGNEVSTIG-DVYSYGILLLELMIREKPSDIMFEGDMNLHKFAKMALSNH 257
+ Y APE + ++ T D++S G +L E M+ +P +F G L + NH
Sbjct: 196 TRWYRAPEIMLNSKGYTKSIDIWSVGCILAE-MLSNRP---IFPGKHYLDQL------NH 245
Query: 258 VKDIVDS 264
+ I+ S
Sbjct: 246 ILGILGS 252
>pdb|3C9W|A Chain A, Crystal Structure Of Erk-2 With Hypothemycin Covalently
Bound
pdb|3C9W|B Chain B, Crystal Structure Of Erk-2 With Hypothemycin Covalently
Bound
Length = 357
Score = 41.2 bits (95), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 38/127 (29%), Positives = 59/127 (46%), Gaps = 15/127 (11%)
Query: 140 VASALNYLHHDCQPVTAHCVLKPSNVLLDDDMTARVGDFGLARFLPPTRTQTSSI-DVKG 198
+ L Y+H H LKPSN+LL+ ++ DFGLAR P T + +
Sbjct: 130 ILRGLKYIH---SANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVA 186
Query: 199 SIGYIAPEYGVGNEVSTIG-DVYSYGILLLELMIREKPSDIMFEGDMNLHKFAKMALSNH 257
+ Y APE + ++ T D++S G +L E M+ +P +F G L + NH
Sbjct: 187 TRWYRAPEIMLNSKGYTKSIDIWSVGCILAE-MLSNRP---IFPGKHYLDQL------NH 236
Query: 258 VKDIVDS 264
+ I+ S
Sbjct: 237 ILGILGS 243
>pdb|2FYS|B Chain B, Crystal Structure Of Erk2 Complex With Kim Peptide Derived
From Mkp3
pdb|2FYS|A Chain A, Crystal Structure Of Erk2 Complex With Kim Peptide Derived
From Mkp3
pdb|1ERK|A Chain A, Structure Of Signal-Regulated Kinase
pdb|3ERK|A Chain A, The Complex Structure Of The Map Kinase Erk2SB220025
pdb|4ERK|A Chain A, The Complex Structure Of The Map Kinase Erk2OLOMOUCINE
pdb|3QYI|A Chain A, Map Kinase Erk2 Complexed With
1,1-Dioxo-2,3-Dihydrothiophen-3-Yl Benzenesulfonate
Length = 364
Score = 41.2 bits (95), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 38/127 (29%), Positives = 59/127 (46%), Gaps = 15/127 (11%)
Query: 140 VASALNYLHHDCQPVTAHCVLKPSNVLLDDDMTARVGDFGLARFLPPTRTQTSSI-DVKG 198
+ L Y+H H LKPSN+LL+ ++ DFGLAR P T + +
Sbjct: 137 ILRGLKYIH---SANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVA 193
Query: 199 SIGYIAPEYGVGNEVSTIG-DVYSYGILLLELMIREKPSDIMFEGDMNLHKFAKMALSNH 257
+ Y APE + ++ T D++S G +L E M+ +P +F G L + NH
Sbjct: 194 TRWYRAPEIMLNSKGYTKSIDIWSVGCILAE-MLSNRP---IFPGKHYLDQL------NH 243
Query: 258 VKDIVDS 264
+ I+ S
Sbjct: 244 ILGILGS 250
>pdb|3O71|A Chain A, Crystal Structure Of Erk2DCC PEPTIDE COMPLEX
Length = 358
Score = 41.2 bits (95), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 38/127 (29%), Positives = 59/127 (46%), Gaps = 15/127 (11%)
Query: 140 VASALNYLHHDCQPVTAHCVLKPSNVLLDDDMTARVGDFGLARFLPPTRTQTSSI-DVKG 198
+ L Y+H H LKPSN+LL+ ++ DFGLAR P T + +
Sbjct: 131 ILRGLKYIH---SANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVA 187
Query: 199 SIGYIAPEYGVGNEVSTIG-DVYSYGILLLELMIREKPSDIMFEGDMNLHKFAKMALSNH 257
+ Y APE + ++ T D++S G +L E M+ +P +F G L + NH
Sbjct: 188 TRWYRAPEIMLNSKGYTKSIDIWSVGCILAE-MLSNRP---IFPGKHYLDQL------NH 237
Query: 258 VKDIVDS 264
+ I+ S
Sbjct: 238 ILGILGS 244
>pdb|1PME|A Chain A, Structure Of Penta Mutant Human Erk2 Map Kinase Complexed
With A Specific Inhibitor Of Human P38 Map Kinase
Length = 380
Score = 41.2 bits (95), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 38/127 (29%), Positives = 59/127 (46%), Gaps = 15/127 (11%)
Query: 140 VASALNYLHHDCQPVTAHCVLKPSNVLLDDDMTARVGDFGLARFLPPTRTQTSSI-DVKG 198
+ L Y+H H LKPSN+LL+ ++ DFGLAR P T + +
Sbjct: 153 ILRGLKYIH---SANVLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLTEYVA 209
Query: 199 SIGYIAPEYGVGNEVSTIG-DVYSYGILLLELMIREKPSDIMFEGDMNLHKFAKMALSNH 257
+ Y APE + ++ T D++S G +L E M+ +P +F G L + NH
Sbjct: 210 TRWYRAPEIMLNSKGYTKSIDIWSVGCILAE-MLSNRP---IFPGKHYLDQL------NH 259
Query: 258 VKDIVDS 264
+ I+ S
Sbjct: 260 ILGILGS 266
>pdb|3VNT|A Chain A, Crystal Structure Of The Kinase Domain Of Human Vegfr2
With A [1, 3]thiazolo[5,4-B]pyridine Derivative
Length = 318
Score = 41.2 bits (95), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 46/181 (25%), Positives = 78/181 (43%), Gaps = 22/181 (12%)
Query: 61 KSFIAECKALRNIRHR-NLIKVLTACLGVDYQGNDFKALVYEFMHNRSLKEWLYPISKED 119
++ ++E K L +I H N++ +L AC G +V EF +L +L E
Sbjct: 77 RALMSELKILIHIGHHLNVVNLLGACTK---PGGPLMVIV-EFCKFGNLSTYLRSKRNEF 132
Query: 120 ETYKRPXXXXXXXXXXI------AIDVASALNYLHHDCQPVTAHCV---LKPSNVLLDDD 170
YK + + VA + +L + C+ L N+LL +
Sbjct: 133 VPYKEAPEDLYKDFLTLEHLICYSFQVAKGMEFL------ASRKCIHRDLAARNILLSEK 186
Query: 171 MTARVGDFGLARFLPPTRTQTSSIDVKGSIGYIAPEYGVGNEVSTI-GDVYSYGILLLEL 229
++ DFGLAR + D + + ++APE + + V TI DV+S+G+LL E+
Sbjct: 187 NVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPE-TIFDRVYTIQSDVWSFGVLLWEI 245
Query: 230 M 230
Sbjct: 246 F 246
>pdb|2J0L|A Chain A, Crystal Structure Of A The Active Conformation Of The
Kinase Domain Of Focal Adhesion Kinase With A
Phosphorylated Activation Loop
Length = 276
Score = 41.2 bits (95), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 25/95 (26%), Positives = 49/95 (51%), Gaps = 4/95 (4%)
Query: 137 AIDVASALNYLHHDCQPVTAHCVLKPSNVLLDDDMTARVGDFGLARFLPPTRTQTSSIDV 196
A +++AL YL H + NVL+ + ++GDFGL+R++ + T +
Sbjct: 117 AYQLSTALAYLESK---RFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDS-TXXKASKG 172
Query: 197 KGSIGYIAPEYGVGNEVSTIGDVYSYGILLLELMI 231
K I ++APE ++ DV+ +G+ + E+++
Sbjct: 173 KLPIKWMAPESINFRRFTSASDVWMFGVCMWEILM 207
>pdb|4GSB|A Chain A, Monoclinic Crystal Form Of The Apo-Erk2
Length = 364
Score = 41.2 bits (95), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 38/127 (29%), Positives = 59/127 (46%), Gaps = 15/127 (11%)
Query: 140 VASALNYLHHDCQPVTAHCVLKPSNVLLDDDMTARVGDFGLARFLPPTRTQTSSI-DVKG 198
+ L Y+H H LKPSN+LL+ ++ DFGLAR P T + +
Sbjct: 137 ILRGLKYIH---SANVLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLTEYVA 193
Query: 199 SIGYIAPEYGVGNEVSTIG-DVYSYGILLLELMIREKPSDIMFEGDMNLHKFAKMALSNH 257
+ Y APE + ++ T D++S G +L E M+ +P +F G L + NH
Sbjct: 194 TRWYRAPEIMLNSKGYTKSIDIWSVGCILAE-MLSNRP---IFPGKHYLDQL------NH 243
Query: 258 VKDIVDS 264
+ I+ S
Sbjct: 244 ILGILGS 250
>pdb|3R63|A Chain A, Structure Of Erk2 (Spe) Mutant (S246e)
Length = 358
Score = 41.2 bits (95), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 38/127 (29%), Positives = 59/127 (46%), Gaps = 15/127 (11%)
Query: 140 VASALNYLHHDCQPVTAHCVLKPSNVLLDDDMTARVGDFGLARFLPPTRTQTSSI-DVKG 198
+ L Y+H H LKPSN+LL+ ++ DFGLAR P T + +
Sbjct: 131 ILRGLKYIH---SANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVA 187
Query: 199 SIGYIAPEYGVGNEVSTIG-DVYSYGILLLELMIREKPSDIMFEGDMNLHKFAKMALSNH 257
+ Y APE + ++ T D++S G +L E M+ +P +F G L + NH
Sbjct: 188 TRWYRAPEIMLNSKGYTKSIDIWSVGCILAE-MLSNRP---IFPGKHYLDQL------NH 237
Query: 258 VKDIVDS 264
+ I+ S
Sbjct: 238 ILGILGS 244
>pdb|3Q52|A Chain A, Structure Of Phosphorylated Pak1 Kinase Domain
pdb|3Q53|A Chain A, Structure Of Phosphorylated Pak1 Kinase Domain In Complex
With Atp
Length = 306
Score = 41.2 bits (95), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 26/93 (27%), Positives = 47/93 (50%), Gaps = 5/93 (5%)
Query: 143 ALNYLHHDCQPVTAHCVLKPSNVLLDDDMTARVGDFGLARFLPPTRTQTSSIDVKGSIGY 202
AL +LH + H +K N+LL D + ++ DFG + P +++ S + G+ +
Sbjct: 129 ALEFLHSN---QVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQSKRSXM--VGTPYW 183
Query: 203 IAPEYGVGNEVSTIGDVYSYGILLLELMIREKP 235
+APE D++S GI+ +E++ E P
Sbjct: 184 MAPEVVTRKAYGPKVDIWSLGIMAIEMIEGEPP 216
>pdb|3SLS|A Chain A, Crystal Structure Of Human Mek-1 Kinase In Complex With
Ucb1353770 And Amppnp
pdb|3SLS|B Chain B, Crystal Structure Of Human Mek-1 Kinase In Complex With
Ucb1353770 And Amppnp
Length = 304
Score = 41.2 bits (95), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 29/117 (24%), Positives = 53/117 (45%), Gaps = 6/117 (5%)
Query: 119 DETYKRPXXXXXXXXXXIAIDVASALNYLHHDCQPVTAHCVLKPSNVLLDDDMTARVGDF 178
D+ K+ ++I V L YL + H +KPSN+L++ ++ DF
Sbjct: 111 DQVLKKAGRIPEQILGKVSIAVIKGLTYLREKHK--IMHRDVKPSNILVNSRGEIKLCDF 168
Query: 179 GLARFLPPTRTQTSSIDVKGSIGYIAPEYGVGNEVSTIGDVYSYGILLLELMIREKP 235
G++ L + + G+ Y++PE G S D++S G+ L+E+ + P
Sbjct: 169 GVSGQLIDSMANS----FVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYP 221
>pdb|3FXZ|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Ruthenium
Complex Lambda-Fl172
pdb|3FY0|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Ruthenium
Complex Dw1
pdb|4DAW|A Chain A, Crystal Structure Of Pak1 Kinase Domain With The Ruthenium
Phthalimide Complex
Length = 297
Score = 41.2 bits (95), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 26/93 (27%), Positives = 47/93 (50%), Gaps = 5/93 (5%)
Query: 143 ALNYLHHDCQPVTAHCVLKPSNVLLDDDMTARVGDFGLARFLPPTRTQTSSIDVKGSIGY 202
AL +LH + H +K N+LL D + ++ DFG + P +++ S + G+ +
Sbjct: 128 ALEFLHSN---QVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQSKRSXM--VGTPYW 182
Query: 203 IAPEYGVGNEVSTIGDVYSYGILLLELMIREKP 235
+APE D++S GI+ +E++ E P
Sbjct: 183 MAPEVVTRKAYGPKVDIWSLGIMAIEMIEGEPP 215
>pdb|1YVJ|A Chain A, Crystal Structure Of The Jak3 Kinase Domain In Complex
With A Staurosporine Analogue
Length = 290
Score = 41.2 bits (95), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 25/75 (33%), Positives = 39/75 (52%), Gaps = 1/75 (1%)
Query: 157 HCVLKPSNVLLDDDMTARVGDFGLARFLPPTRTQTSSIDVKGS-IGYIAPEYGVGNEVST 215
H L N+L++ + ++ DFGLA+ LP + + S I + APE N S
Sbjct: 134 HRDLAARNILVESEAHVKIADFGLAKLLPLDKDXXVVREPGQSPIFWYAPESLSDNIFSR 193
Query: 216 IGDVYSYGILLLELM 230
DV+S+G++L EL
Sbjct: 194 QSDVWSFGVVLYELF 208
>pdb|4FV6|A Chain A, Crystal Structure Of The Erk2 Complexed With E57
Length = 360
Score = 41.2 bits (95), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 38/127 (29%), Positives = 59/127 (46%), Gaps = 15/127 (11%)
Query: 140 VASALNYLHHDCQPVTAHCVLKPSNVLLDDDMTARVGDFGLARFLPPTRTQTSSI-DVKG 198
+ L Y+H H LKPSN+LL+ ++ DFGLAR P T + +
Sbjct: 133 ILRGLKYIH---SANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVA 189
Query: 199 SIGYIAPEYGVGNEVSTIG-DVYSYGILLLELMIREKPSDIMFEGDMNLHKFAKMALSNH 257
+ Y APE + ++ T D++S G +L E M+ +P +F G L + NH
Sbjct: 190 TRWYRAPEIMLNSKGYTKSIDIWSVGCILAE-MLSNRP---IFPGKHYLDQL------NH 239
Query: 258 VKDIVDS 264
+ I+ S
Sbjct: 240 ILGILGS 246
>pdb|3C7Q|A Chain A, Structure Of Vegfr2 Kinase Domain In Complex With Bibf1120
Length = 316
Score = 41.2 bits (95), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 49/179 (27%), Positives = 78/179 (43%), Gaps = 20/179 (11%)
Query: 61 KSFIAECKALRNIRHR-NLIKVLTACLGVDYQGNDFKALVYEF-------MHNRSLKEWL 112
++ ++E K L +I H N++ +L AC G +V EF + RS +
Sbjct: 77 RALMSELKILIHIGHHLNVVNLLGACTK---PGGPLMVIV-EFCKFGNLSTYLRSKRNEF 132
Query: 113 YPISKEDETYKRPXXXXXXXXXXIAIDVASALNYLHHDCQPVTAHCVLKPSNVLLDDDMT 172
P ED YK + VA + +L H L N+LL +
Sbjct: 133 VPYKPED-LYK--DFLTLEHLIXYSFQVAKGMEFL---ASRKXIHRDLAARNILLSEKNV 186
Query: 173 ARVGDFGLARFLPPTRTQTSSIDVKGSIGYIAPEYGVGNEVSTI-GDVYSYGILLLELM 230
++ DFGLAR + D + + ++APE + + V TI DV+S+G+LL E+
Sbjct: 187 VKICDFGLARDIXKDPDXVRKGDARLPLKWMAPE-TIFDRVYTIQSDVWSFGVLLWEIF 244
>pdb|2Y9Q|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4FMQ|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 41.2 bits (95), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 38/127 (29%), Positives = 59/127 (46%), Gaps = 15/127 (11%)
Query: 140 VASALNYLHHDCQPVTAHCVLKPSNVLLDDDMTARVGDFGLARFLPPTRTQTSSI-DVKG 198
+ L Y+H H LKPSN+LL+ ++ DFGLAR P T + +
Sbjct: 135 ILRGLKYIH---SANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVA 191
Query: 199 SIGYIAPEYGVGNEVSTIG-DVYSYGILLLELMIREKPSDIMFEGDMNLHKFAKMALSNH 257
+ Y APE + ++ T D++S G +L E M+ +P +F G L + NH
Sbjct: 192 TRWYRAPEIMLNSKGYTKSIDIWSVGCILAE-MLSNRP---IFPGKHYLDQL------NH 241
Query: 258 VKDIVDS 264
+ I+ S
Sbjct: 242 ILGILGS 248
>pdb|3ZUV|A Chain A, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Phosphorylated Map Kinase
Erk2
pdb|3ZUV|C Chain C, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Phosphorylated Map Kinase
Erk2
Length = 364
Score = 41.2 bits (95), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 38/127 (29%), Positives = 59/127 (46%), Gaps = 15/127 (11%)
Query: 140 VASALNYLHHDCQPVTAHCVLKPSNVLLDDDMTARVGDFGLARFLPPTRTQTSSI-DVKG 198
+ L Y+H H LKPSN+LL+ ++ DFGLAR P T + +
Sbjct: 137 ILRGLKYIH---SANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLXEXVA 193
Query: 199 SIGYIAPEYGVGNEVSTIG-DVYSYGILLLELMIREKPSDIMFEGDMNLHKFAKMALSNH 257
+ Y APE + ++ T D++S G +L E M+ +P +F G L + NH
Sbjct: 194 TRWYRAPEIMLNSKGYTKSIDIWSVGCILAE-MLSNRP---IFPGKHYLDQL------NH 243
Query: 258 VKDIVDS 264
+ I+ S
Sbjct: 244 ILGILGS 250
>pdb|2ERK|A Chain A, Phosphorylated Map Kinase Erk2
Length = 365
Score = 41.2 bits (95), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 38/127 (29%), Positives = 59/127 (46%), Gaps = 15/127 (11%)
Query: 140 VASALNYLHHDCQPVTAHCVLKPSNVLLDDDMTARVGDFGLARFLPPTRTQTSSI-DVKG 198
+ L Y+H H LKPSN+LL+ ++ DFGLAR P T + +
Sbjct: 138 ILRGLKYIH---SANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLXEXVA 194
Query: 199 SIGYIAPEYGVGNEVSTIG-DVYSYGILLLELMIREKPSDIMFEGDMNLHKFAKMALSNH 257
+ Y APE + ++ T D++S G +L E M+ +P +F G L + NH
Sbjct: 195 TRWYRAPEIMLNSKGYTKSIDIWSVGCILAE-MLSNRP---IFPGKHYLDQL------NH 244
Query: 258 VKDIVDS 264
+ I+ S
Sbjct: 245 ILGILGS 251
>pdb|3PP0|A Chain A, Crystal Structure Of The Kinase Domain Of Human Her2
(Erbb2).
pdb|3PP0|B Chain B, Crystal Structure Of The Kinase Domain Of Human Her2
(Erbb2).
pdb|3RCD|A Chain A, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|B Chain B, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|C Chain C, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|D Chain D, Her2 Kinase Domain Complexed With Tak-285
Length = 338
Score = 41.2 bits (95), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 33/101 (32%), Positives = 50/101 (49%), Gaps = 4/101 (3%)
Query: 138 IDVASALNYLHHDCQPVTAHCVLKPSNVLLDDDMTARVGDFGLARFLPPTRTQTSSIDVK 197
+ +A ++YL D + V H L NVL+ ++ DFGLAR L T+ + K
Sbjct: 126 MQIAKGMSYLE-DVRLV--HRDLAARNVLVKSPNHVKITDFGLARLLDIDETEYHADGGK 182
Query: 198 GSIGYIAPEYGVGNEVSTIGDVYSYGILLLELM-IREKPSD 237
I ++A E + + DV+SYG+ + ELM KP D
Sbjct: 183 VPIKWMALESILRRRFTHQSDVWSYGVTVWELMTFGAKPYD 223
>pdb|4FV7|A Chain A, Crystal Structure Of The Erk2 Complexed With E94
pdb|4G6O|A Chain A, Crystal Structure Of The Erk2
Length = 360
Score = 41.2 bits (95), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 38/127 (29%), Positives = 59/127 (46%), Gaps = 15/127 (11%)
Query: 140 VASALNYLHHDCQPVTAHCVLKPSNVLLDDDMTARVGDFGLARFLPPTRTQTSSI-DVKG 198
+ L Y+H H LKPSN+LL+ ++ DFGLAR P T + +
Sbjct: 133 ILRGLKYIH---SANVLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLTEYVA 189
Query: 199 SIGYIAPEYGVGNEVSTIG-DVYSYGILLLELMIREKPSDIMFEGDMNLHKFAKMALSNH 257
+ Y APE + ++ T D++S G +L E M+ +P +F G L + NH
Sbjct: 190 TRWYRAPEIMLNSKGYTKSIDIWSVGCILAE-MLSNRP---IFPGKHYLDQL------NH 239
Query: 258 VKDIVDS 264
+ I+ S
Sbjct: 240 ILGILGS 246
>pdb|1WZY|A Chain A, Crystal Structure Of Human Erk2 Complexed With A
Pyrazolopyridazine Derivative
pdb|3W55|A Chain A, The Structure Of Erk2 In Complex With Fr148083
Length = 368
Score = 41.2 bits (95), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 38/127 (29%), Positives = 59/127 (46%), Gaps = 15/127 (11%)
Query: 140 VASALNYLHHDCQPVTAHCVLKPSNVLLDDDMTARVGDFGLARFLPPTRTQTSSI-DVKG 198
+ L Y+H H LKPSN+LL+ ++ DFGLAR P T + +
Sbjct: 141 ILRGLKYIH---SANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVA 197
Query: 199 SIGYIAPEYGVGNEVSTIG-DVYSYGILLLELMIREKPSDIMFEGDMNLHKFAKMALSNH 257
+ Y APE + ++ T D++S G +L E M+ +P +F G L + NH
Sbjct: 198 TRWYRAPEIMLNSKGYTKSIDIWSVGCILAE-MLSNRP---IFPGKHYLDQL------NH 247
Query: 258 VKDIVDS 264
+ I+ S
Sbjct: 248 ILGILGS 254
>pdb|1TVO|A Chain A, The Structure Of Erk2 In Complex With A Small Molecule
Inhibitor
Length = 368
Score = 41.2 bits (95), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 38/127 (29%), Positives = 59/127 (46%), Gaps = 15/127 (11%)
Query: 140 VASALNYLHHDCQPVTAHCVLKPSNVLLDDDMTARVGDFGLARFLPPTRTQTSSI-DVKG 198
+ L Y+H H LKPSN+LL+ ++ DFGLAR P T + +
Sbjct: 133 ILRGLKYIH---SANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVA 189
Query: 199 SIGYIAPEYGVGNEVSTIG-DVYSYGILLLELMIREKPSDIMFEGDMNLHKFAKMALSNH 257
+ Y APE + ++ T D++S G +L E M+ +P +F G L + NH
Sbjct: 190 TRWYRAPEIMLNSKGYTKSIDIWSVGCILAE-MLSNRP---IFPGKHYLDQL------NH 239
Query: 258 VKDIVDS 264
+ I+ S
Sbjct: 240 ILGILGS 246
>pdb|3TEI|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4H3P|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4H3P|D Chain D, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 41.2 bits (95), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 38/127 (29%), Positives = 59/127 (46%), Gaps = 15/127 (11%)
Query: 140 VASALNYLHHDCQPVTAHCVLKPSNVLLDDDMTARVGDFGLARFLPPTRTQTSSI-DVKG 198
+ L Y+H H LKPSN+LL+ ++ DFGLAR P T + +
Sbjct: 135 ILRGLKYIH---SANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVA 191
Query: 199 SIGYIAPEYGVGNEVSTIG-DVYSYGILLLELMIREKPSDIMFEGDMNLHKFAKMALSNH 257
+ Y APE + ++ T D++S G +L E M+ +P +F G L + NH
Sbjct: 192 TRWYRAPEIMLNSKGYTKSIDIWSVGCILAE-MLSNRP---IFPGKHYLDQL------NH 241
Query: 258 VKDIVDS 264
+ I+ S
Sbjct: 242 ILGILGS 248
>pdb|3AMA|A Chain A, Protein Kinase A Sixfold Mutant Model Of Aurora B With
Inhibitor Jnj- 7706621
pdb|3AMB|A Chain A, Protein Kinase A Sixfold Mutant Model Of Aurora B With
Inhibitor Vx- 680
Length = 351
Score = 41.2 bits (95), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 30/119 (25%), Positives = 55/119 (46%), Gaps = 18/119 (15%)
Query: 160 LKPSNVLLDDDMTARVGDFGLARFLPPTRTQTSSIDVKGSIGYIAPEYGVGNEVSTIGDV 219
LKP N+L+D +V DFG A+ R + + + G+ Y+APE + + D
Sbjct: 168 LKPENLLIDQQGYIKVADFGFAK-----RVKGRTWXLCGTPEYLAPEIILSKGYNKAVDW 222
Query: 220 YSYGILLLELMIREKPSDIMFEGDMNLHKFAKMA---------LSNHVKDIVDSILLND 269
++ G+L+ E+ P F D + + K+ S+ +KD++ ++L D
Sbjct: 223 WALGVLIYEMAAGYPP----FFADQPIQIYEKIVSGKVRFPSHFSSDLKDLLRNLLQVD 277
>pdb|2WTK|C Chain C, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha
Complex
pdb|2WTK|F Chain F, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha
Complex
Length = 305
Score = 41.2 bits (95), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 48/197 (24%), Positives = 78/197 (39%), Gaps = 44/197 (22%)
Query: 66 ECKALRNIRHRNLIKVLTACLGVDYQGNDFKALVYEFMHN---------RSLKEWLYPIS 116
E + LR +RH+N+I++ VD N+ K +Y M S+ E +P+
Sbjct: 56 EIQLLRRLRHKNVIQL------VDVLYNEEKQKMYMVMEYCVCGMQEMLDSVPEKRFPVC 109
Query: 117 KEDETYKRPXXXXXXXXXXIAIDVASALNYLHHDCQPVTAHCVLKPSNVLLDDDMTARVG 176
+ + + L YLH H +KP N+LL T ++
Sbjct: 110 QAHGYF---------------CQLIDGLEYLHSQG---IVHKDIKPGNLLLTTGGTLKIS 151
Query: 177 DFGLARFLPPTRTQTSSIDVKGSIGYIAPEYGVGNEVSTIG----DVYSYGILLLELMIR 232
G+A L P + +GS + PE + N + T D++S G+ L +
Sbjct: 152 ALGVAEALHPFAADDTCRTSQGSPAFQPPE--IANGLDTFSGFKVDIWSAGVTLYNITTG 209
Query: 233 EKPSDIMFEGDMNLHKF 249
P FEGD N++K
Sbjct: 210 LYP----FEGD-NIYKL 221
>pdb|2OJG|A Chain A, Crystal Structure Of Erk2 In Complex With
N,n-dimethyl-4-(4-
Phenyl-1h-pyrazol-3-yl)-1h-pyrrole-2-carboxamide
pdb|2OJI|A Chain A, Crystal Structure Of Erk2 In Complex With
N-Benzyl-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|2OJJ|A Chain A, Crystal Structure Of Erk2 In Complex With (S)-N-(1-(3-
Chloro-4-Fluorophenyl)-2-Hydroxyethyl)-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|3I5Z|A Chain A, Crystal Structure Of Erk2 Bound To
(S)-N-(2-Hydroxy-1-Phenylethyl)-4-
(5-Methyl-2-(Phenylamino)pyrimidin-4-Yl)-1h-Pyrrole-2-
Carboxamide
pdb|3I60|A Chain A, Crystal Structure Of Erk2 Bound To
(s)-4-(2-(2-chlorophenylamino)-5-
Methylpyrimidin-4-yl)-n-(2-hydroxy-1-phenylethyl)-1h-
pyrrole-2- Carboxamide
Length = 380
Score = 41.2 bits (95), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 38/127 (29%), Positives = 59/127 (46%), Gaps = 15/127 (11%)
Query: 140 VASALNYLHHDCQPVTAHCVLKPSNVLLDDDMTARVGDFGLARFLPPTRTQTSSI-DVKG 198
+ L Y+H H LKPSN+LL+ ++ DFGLAR P T + +
Sbjct: 153 ILRGLKYIH---SANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVA 209
Query: 199 SIGYIAPEYGVGNEVSTIG-DVYSYGILLLELMIREKPSDIMFEGDMNLHKFAKMALSNH 257
+ Y APE + ++ T D++S G +L E M+ +P +F G L + NH
Sbjct: 210 TRWYRAPEIMLNSKGYTKSIDIWSVGCILAE-MLSNRP---IFPGKHYLDQL------NH 259
Query: 258 VKDIVDS 264
+ I+ S
Sbjct: 260 ILGILGS 266
>pdb|1VR2|A Chain A, Human Vascular Endothelial Growth Factor Receptor 2 (Kdr)
Kinase Domain
Length = 316
Score = 41.2 bits (95), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 48/184 (26%), Positives = 81/184 (44%), Gaps = 28/184 (15%)
Query: 61 KSFIAECKALRNIRHR-NLIKVLTACLGVDYQGNDFKALVYEFMHNRSLKEWL------- 112
++ ++E K L +I H N++ +L AC G +V EF +L +L
Sbjct: 75 RALMSELKILIHIGHHLNVVNLLGACTK---PGGPLMVIV-EFCKFGNLSTYLRSKRNEF 130
Query: 113 --YPISKEDETYKRPXXXXXXXXXXIAIDVASALNYLHHDCQPVTAHCV---LKPSNVLL 167
Y ++ ED YK + VA + +L + C+ L N+LL
Sbjct: 131 VPYKVAPED-LYK--DFLTLEHLICYSFQVAKGMEFL------ASRKCIHRDLAARNILL 181
Query: 168 DDDMTARVGDFGLARFLPPTRTQTSSIDVKGSIGYIAPEYGVGNEVSTI-GDVYSYGILL 226
+ ++ DFGLAR + D + + ++APE + + V TI DV+S+G+LL
Sbjct: 182 SEKNVVKICDFGLARDIYKDPDXVRKGDARLPLKWMAPE-TIFDRVYTIQSDVWSFGVLL 240
Query: 227 LELM 230
E+
Sbjct: 241 WEIF 244
>pdb|2GNJ|A Chain A, Pka Three Fold Mutant Model Of Rho-Kinase With Y-27632
pdb|2GNL|A Chain A, Pka Threefold Mutant Model Of Rho-Kinase With Inhibitor H-
1152p
Length = 350
Score = 41.2 bits (95), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 30/119 (25%), Positives = 55/119 (46%), Gaps = 18/119 (15%)
Query: 160 LKPSNVLLDDDMTARVGDFGLARFLPPTRTQTSSIDVKGSIGYIAPEYGVGNEVSTIGDV 219
LKP N+L+D +V DFG A+ R + + + G+ Y+APE + + D
Sbjct: 167 LKPENLLIDQQGYIKVADFGFAK-----RVKGRTWXLCGTPEYLAPEIILSKGYNKAVDW 221
Query: 220 YSYGILLLELMIREKPSDIMFEGDMNLHKFAKMA---------LSNHVKDIVDSILLND 269
++ G+L+ E+ P F D + + K+ S+ +KD++ ++L D
Sbjct: 222 WALGVLIYEMAAGYPP----FFADQPIQIYEKIVSGKVRFPSHFSSDLKDLLRNLLQVD 276
>pdb|4H3Q|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 40.8 bits (94), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 38/127 (29%), Positives = 59/127 (46%), Gaps = 15/127 (11%)
Query: 140 VASALNYLHHDCQPVTAHCVLKPSNVLLDDDMTARVGDFGLARFLPPTRTQTSSI-DVKG 198
+ L Y+H H LKPSN+LL+ ++ DFGLAR P T + +
Sbjct: 135 ILRGLKYIH---SANVLHRDLKPSNLLLNTTSDLKICDFGLARVADPDHDHTGFLTEYVA 191
Query: 199 SIGYIAPEYGVGNEVSTIG-DVYSYGILLLELMIREKPSDIMFEGDMNLHKFAKMALSNH 257
+ Y APE + ++ T D++S G +L E M+ +P +F G L + NH
Sbjct: 192 TRWYRAPEIMLNSKGYTKSIDIWSVGCILAE-MLSNRP---IFPGKHYLDQL------NH 241
Query: 258 VKDIVDS 264
+ I+ S
Sbjct: 242 ILGILGS 248
>pdb|3LZB|A Chain A, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|B Chain B, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|C Chain C, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|D Chain D, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|E Chain E, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|F Chain F, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|G Chain G, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|H Chain H, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
Length = 327
Score = 40.8 bits (94), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 30/101 (29%), Positives = 46/101 (45%), Gaps = 4/101 (3%)
Query: 138 IDVASALNYLHHDCQPVTAHCVLKPSNVLLDDDMTARVGDFGLARFLPPTRTQTSSIDVK 197
+ +A +NYL H L NVL+ ++ DFGLA+ L + + K
Sbjct: 124 VQIAKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGK 180
Query: 198 GSIGYIAPEYGVGNEVSTIGDVYSYGILLLELM-IREKPSD 237
I ++A E + + DV+SYG+ + ELM KP D
Sbjct: 181 VPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYD 221
>pdb|2P2H|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridinyl-Triazine Inhibitor
pdb|2QU5|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzimidazole Inhibitor
pdb|2QU6|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzoxazole Inhibitor
pdb|2QU6|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzoxazole Inhibitor
pdb|3B8Q|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8Q|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8R|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8R|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|2RL5|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A 2,3-Dihydro-1,4-Benzoxazine Inhibitor
pdb|3BE2|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzamide Inhibitor
pdb|3CP9|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CP9|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CPB|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Bisamide Inhibitor
pdb|3CPB|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Bisamide Inhibitor
pdb|3CPC|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CPC|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3DTW|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzisoxazole Inhibitor
pdb|3DTW|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzisoxazole Inhibitor
Length = 314
Score = 40.8 bits (94), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 25/75 (33%), Positives = 40/75 (53%), Gaps = 2/75 (2%)
Query: 157 HCVLKPSNVLLDDDMTARVGDFGLARFLPPTRTQTSSIDVKGSIGYIAPEYGVGNEVSTI 216
H L N+LL + ++ DFGLAR + D + + ++APE + + V TI
Sbjct: 162 HRDLAARNILLSEKNVVKICDFGLARDIXKDPDXVRKGDARLPLKWMAPE-TIFDRVYTI 220
Query: 217 -GDVYSYGILLLELM 230
DV+S+G+LL E+
Sbjct: 221 QSDVWSFGVLLWEIF 235
>pdb|2PY3|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565g Mutation Responsible For
Pfeiffer Syndrome
pdb|2PY3|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565g Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 40.8 bits (94), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 43/183 (23%), Positives = 81/183 (44%), Gaps = 33/183 (18%)
Query: 63 FIAECKALRNI-RHRNLIKVLTAC---------LGVDYQGNDFKALVYEFMHNRSLK--E 110
++E + ++ I +H+N+I +L AC +G +GN + E++ R E
Sbjct: 87 LVSEMEMMKMIGKHKNIINLLGACTQDGPLYVIVGYASKGN-----LREYLRARRPPGME 141
Query: 111 WLYPISK---EDETYKRPXXXXXXXXXXIAIDVASALNYL-HHDCQPVTAHCVLKPSNVL 166
+ Y I++ E T+K +A + YL C H L NVL
Sbjct: 142 YSYDINRVPEEQMTFK--------DLVSCTYQLARGMEYLASQKC----IHRDLAARNVL 189
Query: 167 LDDDMTARVGDFGLARFLPPTRTQTSSIDVKGSIGYIAPEYGVGNEVSTIGDVYSYGILL 226
+ ++ ++ DFGLAR + + + + + ++APE + DV+S+G+L+
Sbjct: 190 VTENNVMKIADFGLARDINNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLM 249
Query: 227 LEL 229
E+
Sbjct: 250 WEI 252
>pdb|1J3H|A Chain A, Crystal Structure Of Apoenzyme Camp-Dependent Protein
Kinase Catalytic Subunit
pdb|1J3H|B Chain B, Crystal Structure Of Apoenzyme Camp-Dependent Protein
Kinase Catalytic Subunit
Length = 350
Score = 40.8 bits (94), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 30/119 (25%), Positives = 55/119 (46%), Gaps = 18/119 (15%)
Query: 160 LKPSNVLLDDDMTARVGDFGLARFLPPTRTQTSSIDVKGSIGYIAPEYGVGNEVSTIGDV 219
LKP N+L+D +V DFG A+ R + + + G+ Y+APE + + D
Sbjct: 167 LKPENLLIDQQGYIQVTDFGFAK-----RVKGRTWXLXGTPEYLAPEIILSKGYNKAVDW 221
Query: 220 YSYGILLLELMIREKPSDIMFEGDMNLHKFAKMA---------LSNHVKDIVDSILLND 269
++ G+L+ E+ P F D + + K+ S+ +KD++ ++L D
Sbjct: 222 WALGVLIYEMAAGYPP----FFADQPIQIYEKIVSGKVRFPSHFSSDLKDLLRNLLQVD 276
>pdb|4HJO|A Chain A, Crystal Structure Of The Inactive Egfr Tyrosine Kinase
Domain With Erlotinib
Length = 337
Score = 40.8 bits (94), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 30/101 (29%), Positives = 46/101 (45%), Gaps = 4/101 (3%)
Query: 138 IDVASALNYLHHDCQPVTAHCVLKPSNVLLDDDMTARVGDFGLARFLPPTRTQTSSIDVK 197
+ +A +NYL H L NVL+ ++ DFGLA+ L + + K
Sbjct: 134 VQIAKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGK 190
Query: 198 GSIGYIAPEYGVGNEVSTIGDVYSYGILLLELM-IREKPSD 237
I ++A E + + DV+SYG+ + ELM KP D
Sbjct: 191 VPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYD 231
>pdb|2GNF|A Chain A, Protein Kinase A Fivefold Mutant Model Of Rho-Kinase With
Y- 27632
Length = 350
Score = 40.8 bits (94), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 30/119 (25%), Positives = 55/119 (46%), Gaps = 18/119 (15%)
Query: 160 LKPSNVLLDDDMTARVGDFGLARFLPPTRTQTSSIDVKGSIGYIAPEYGVGNEVSTIGDV 219
LKP N+L+D +V DFG A+ R + + + G+ Y+APE + + D
Sbjct: 167 LKPENLLIDQQGYIKVADFGFAK-----RVKGRTWXLCGTPEYLAPEIILSKGYNKAVDW 221
Query: 220 YSYGILLLELMIREKPSDIMFEGDMNLHKFAKMA---------LSNHVKDIVDSILLND 269
++ G+L+ E+ P F D + + K+ S+ +KD++ ++L D
Sbjct: 222 WALGVLIYEMAAGYPP----FFADQPIQIYEKIVSGKVRFPSHFSSDLKDLLRNLLQVD 276
>pdb|3VUM|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M7 In Map
Kinase Jnk1
Length = 370
Score = 40.8 bits (94), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 27/96 (28%), Positives = 50/96 (52%), Gaps = 7/96 (7%)
Query: 157 HCVLKPSNVLLDDDMTARVGDFGLARFLPPTRTQTSSIDVKGSIGYIAPEYGVGNEVSTI 216
H LKPSN+++ D T ++ DFGLAR + T + + Y APE +G
Sbjct: 149 HRDLKPSNIVVKSDATLKILDFGLARTAGTSFMMTPYVVTR---YYRAPEVILGMGYKEN 205
Query: 217 GDVYSYGILLLELMIREKPSDIMFEGDMNLHKFAKM 252
D++S G+++ E++ ++F G ++ ++ K+
Sbjct: 206 VDIWSVGVIMGEMI----KGGVLFPGTDHIDQWNKV 237
>pdb|3FHI|A Chain A, Crystal Structure Of A Complex Between The Catalytic And
Regulatory (Ri{alpha}) Subunits Of Pka
Length = 350
Score = 40.8 bits (94), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 30/119 (25%), Positives = 55/119 (46%), Gaps = 18/119 (15%)
Query: 160 LKPSNVLLDDDMTARVGDFGLARFLPPTRTQTSSIDVKGSIGYIAPEYGVGNEVSTIGDV 219
LKP N+L+D +V DFG A+ R + + + G+ Y+APE + + D
Sbjct: 167 LKPENLLIDQQGYIQVTDFGFAK-----RVKGRTWXLAGTPEYLAPEIILSKGYNKAVDW 221
Query: 220 YSYGILLLELMIREKPSDIMFEGDMNLHKFAKMA---------LSNHVKDIVDSILLND 269
++ G+L+ E+ P F D + + K+ S+ +KD++ ++L D
Sbjct: 222 WALGVLIYEMAAGYPP----FFADQPIQIYEKIVSGKVRFPSHFSSDLKDLLRNLLQVD 276
>pdb|3E7O|A Chain A, Crystal Structure Of Jnk2
pdb|3E7O|B Chain B, Crystal Structure Of Jnk2
Length = 360
Score = 40.8 bits (94), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 28/96 (29%), Positives = 49/96 (51%), Gaps = 7/96 (7%)
Query: 157 HCVLKPSNVLLDDDMTARVGDFGLARFLPPTRTQTSSIDVKGSIGYIAPEYGVGNEVSTI 216
H LKPSN+++ D T ++ DFGLAR T + + Y APE +G
Sbjct: 147 HRDLKPSNIVVKSDCTLKILDFGLARTASTNFMMTPYVVTR---YYRAPEVILGMGYKEN 203
Query: 217 GDVYSYGILLLELMIREKPSDIMFEGDMNLHKFAKM 252
D++S G ++ EL+ ++F+G ++ ++ K+
Sbjct: 204 VDIWSVGCIMGELV----KGSVIFQGTDHIDQWNKV 235
>pdb|3VUL|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M1 In Map
Kinase Jnk1
Length = 370
Score = 40.8 bits (94), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 27/96 (28%), Positives = 50/96 (52%), Gaps = 7/96 (7%)
Query: 157 HCVLKPSNVLLDDDMTARVGDFGLARFLPPTRTQTSSIDVKGSIGYIAPEYGVGNEVSTI 216
H LKPSN+++ D T ++ DFGLAR + T + + Y APE +G
Sbjct: 149 HRDLKPSNIVVKSDATLKILDFGLARTAGTSFMMTPYVVTR---YYRAPEVILGMGYKEN 205
Query: 217 GDVYSYGILLLELMIREKPSDIMFEGDMNLHKFAKM 252
D++S G+++ E++ ++F G ++ ++ K+
Sbjct: 206 VDIWSVGVIMGEMI----KGGVLFPGTDHIDQWNKV 237
>pdb|2GNG|A Chain A, Protein Kinase A Fivefold Mutant Model Of Rho-Kinase
pdb|2GNH|A Chain A, Pka Five Fold Mutant Model Of Rho-Kinase With H1152p
pdb|2GNI|A Chain A, Pka Fivefold Mutant Model Of Rho-Kinase With Inhibitor
Fasudil (Ha1077)
Length = 350
Score = 40.8 bits (94), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 30/119 (25%), Positives = 55/119 (46%), Gaps = 18/119 (15%)
Query: 160 LKPSNVLLDDDMTARVGDFGLARFLPPTRTQTSSIDVKGSIGYIAPEYGVGNEVSTIGDV 219
LKP N+L+D +V DFG A+ R + + + G+ Y+APE + + D
Sbjct: 167 LKPENLLIDQQGYIKVADFGFAK-----RVKGRTWXLCGTPEYLAPEIILSKGYNKAVDW 221
Query: 220 YSYGILLLELMIREKPSDIMFEGDMNLHKFAKMA---------LSNHVKDIVDSILLND 269
++ G+L+ E+ P F D + + K+ S+ +KD++ ++L D
Sbjct: 222 WALGVLIYEMAAGYPP----FFADQPIQIYEKIVSGKVRFPSHFSSDLKDLLRNLLQVD 276
>pdb|2PVY|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|C Chain C, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|D Chain D, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome
Length = 324
Score = 40.8 bits (94), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 43/183 (23%), Positives = 81/183 (44%), Gaps = 33/183 (18%)
Query: 63 FIAECKALRNI-RHRNLIKVLTACLGVDYQGNDFKALVYEFMHNRSLKEWL--------- 112
++E + ++ I +H+N+I +L AC Q +V E+ +L+E+L
Sbjct: 87 LVSEMEMMKMIGKHKNIINLLGACT----QDGPLYVIV-EYASKGNLREYLRARRPPGME 141
Query: 113 --YPISK---EDETYKRPXXXXXXXXXXIAIDVASALNYL-HHDCQPVTAHCVLKPSNVL 166
Y I++ E T+K +A + YL C H L NVL
Sbjct: 142 YSYDINRVPEEQMTFK--------DLVSCTYQLARGMEYLASQKC----IHRDLAARNVL 189
Query: 167 LDDDMTARVGDFGLARFLPPTRTQTSSIDVKGSIGYIAPEYGVGNEVSTIGDVYSYGILL 226
+ ++ ++ DFGLAR + ++ + + + ++APE + DV+S+G+L+
Sbjct: 190 VTENNVMKIADFGLARDINNIDYYKNTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLM 249
Query: 227 LEL 229
E+
Sbjct: 250 WEI 252
>pdb|4HVD|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((s)-1,2,2-trimethyl-propyl)-amide
pdb|4HVG|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((s)-2-hydroxy-1,2-dimethyl-propyl)- Amide
pdb|4HVH|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((r)-2-hydroxy-1,2-dimethyl-propyl
pdb|4HVI|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((r)-1-methyl-2-oxo-2-piperidin-1-yl- Ethyl)-amide
Length = 314
Score = 40.8 bits (94), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 25/75 (33%), Positives = 39/75 (52%), Gaps = 1/75 (1%)
Query: 157 HCVLKPSNVLLDDDMTARVGDFGLARFLPPTRTQTSSIDVKGS-IGYIAPEYGVGNEVST 215
H L N+L++ + ++ DFGLA+ LP + + S I + APE N S
Sbjct: 137 HRDLAARNILVESEAHVKIADFGLAKLLPLDKDYYVVREPGQSPIFWYAPESLSDNIFSR 196
Query: 216 IGDVYSYGILLLELM 230
DV+S+G++L EL
Sbjct: 197 QSDVWSFGVVLYELF 211
>pdb|2XIR|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Pf-00337210 (N,2-Dimethyl-6-(7-(2-Morpholinoethoxy)
Quinolin-4-Yloxy)benzofuran-3-Carboxamide)
pdb|4AG8|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Axitinib (Ag-013736)
(N-Methyl-2-(3-((E)-2-Pyridin-2-
Yl-Vinyl)-1h-Indazol-6-Ylsulfanyl)-Benzamide)
Length = 316
Score = 40.8 bits (94), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 48/184 (26%), Positives = 81/184 (44%), Gaps = 28/184 (15%)
Query: 61 KSFIAECKALRNIRHR-NLIKVLTACLGVDYQGNDFKALVYEFMHNRSLKEWL------- 112
++ ++E K L +I H N++ +L AC G +V EF +L +L
Sbjct: 75 RALMSELKILIHIGHHLNVVNLLGACTK---PGGPLMVIV-EFCKFGNLSTYLRSKRNEF 130
Query: 113 --YPISKEDETYKRPXXXXXXXXXXIAIDVASALNYLHHDCQPVTAHCV---LKPSNVLL 167
Y ++ ED YK + VA + +L + C+ L N+LL
Sbjct: 131 VPYKVAPED-LYK--DFLTLEHLICYSFQVAKGMEFL------ASRKCIHRDLAARNILL 181
Query: 168 DDDMTARVGDFGLARFLPPTRTQTSSIDVKGSIGYIAPEYGVGNEVSTI-GDVYSYGILL 226
+ ++ DFGLAR + D + + ++APE + + V TI DV+S+G+LL
Sbjct: 182 SEKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPE-TIFDRVYTIQSDVWSFGVLL 240
Query: 227 LELM 230
E+
Sbjct: 241 WEIF 244
>pdb|4FNW|A Chain A, Crystal Structure Of The Apo F1174l Anaplastic Lymphoma
Kinase Catalytic Domain
Length = 327
Score = 40.8 bits (94), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 44/179 (24%), Positives = 75/179 (41%), Gaps = 30/179 (16%)
Query: 63 FIAECKALRNIRHRNLIKVLTACLGVDYQGNDFKALVYEFMHNRSLKEWLYPISKEDETY 122
F+ E + + H+N+++ C+GV Q + ++ E M LK +L ET
Sbjct: 81 FLMEALIISKLNHQNIVR----CIGVSLQSLP-RFILLELMAGGDLKSFL------RETR 129
Query: 123 KRPXXXXXXXXX---XIAIDVASALNYLHHDCQPVTAHCVLKPSNVLL---DDDMTARVG 176
RP +A D+A YL + H + N LL A++G
Sbjct: 130 PRPSQPSSLAMLDLLHVARDIACGCQYLEEN---HFIHRDIAARNCLLTCPGPGRVAKIG 186
Query: 177 DFGLARFLPPTRTQTSSIDVKGS-----IGYIAPEYGVGNEVSTIGDVYSYGILLLELM 230
DFG+AR + +S KG + ++ PE + ++ D +S+G+LL E+
Sbjct: 187 DFGMARDI-----YRASYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIF 240
>pdb|3EQC|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Ternary Complex With
Compound 1, Atp-Gs And Mg2p
pdb|3EQD|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With Atp-Gs
And Mg2p
pdb|3EQF|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With K252a
And Mg2p
pdb|3EQG|A Chain A, X-ray Structure Of The Human Mitogen-activated Protein
Kinase Kinase 1 (mek1) In A Ternary Complex With Pd, Adp
And Mg2p
pdb|3EQH|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Ternary Complex With U0126,
Adp And Mg2p
pdb|3EQI|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With Adp And
Mg2p
Length = 360
Score = 40.8 bits (94), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 29/117 (24%), Positives = 53/117 (45%), Gaps = 6/117 (5%)
Query: 119 DETYKRPXXXXXXXXXXIAIDVASALNYLHHDCQPVTAHCVLKPSNVLLDDDMTARVGDF 178
D+ K+ ++I V L YL + H +KPSN+L++ ++ DF
Sbjct: 119 DQVLKKAGRIPEQILGKVSIAVIKGLTYLREKHK--IMHRDVKPSNILVNSRGEIKLCDF 176
Query: 179 GLARFLPPTRTQTSSIDVKGSIGYIAPEYGVGNEVSTIGDVYSYGILLLELMIREKP 235
G++ L + + G+ Y++PE G S D++S G+ L+E+ + P
Sbjct: 177 GVSGQL----IDSMANSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYP 229
>pdb|3GOP|A Chain A, Crystal Structure Of The Egf Receptor Juxtamembrane And
Kinase Domains
Length = 361
Score = 40.8 bits (94), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 30/101 (29%), Positives = 46/101 (45%), Gaps = 4/101 (3%)
Query: 138 IDVASALNYLHHDCQPVTAHCVLKPSNVLLDDDMTARVGDFGLARFLPPTRTQTSSIDVK 197
+ +A +NYL H L NVL+ ++ DFGLA+ L + + K
Sbjct: 158 VQIAKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGK 214
Query: 198 GSIGYIAPEYGVGNEVSTIGDVYSYGILLLELM-IREKPSD 237
I ++A E + + DV+SYG+ + ELM KP D
Sbjct: 215 VPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYD 255
>pdb|3BEL|A Chain A, X-Ray Structure Of Egfr In Complex With Oxime Inhibitor
pdb|2RGP|A Chain A, Structure Of Egfr In Complex With Hydrazone, A Potent Dual
Inhibitor
Length = 315
Score = 40.8 bits (94), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 32/101 (31%), Positives = 49/101 (48%), Gaps = 4/101 (3%)
Query: 138 IDVASALNYLHHDCQPVTAHCVLKPSNVLLDDDMTARVGDFGLARFLPPTRTQTSSIDVK 197
+ +A +NYL D + V H L NVL+ ++ DFGLA+ L + + K
Sbjct: 118 VQIAKGMNYLE-DRRLV--HRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGK 174
Query: 198 GSIGYIAPEYGVGNEVSTIGDVYSYGILLLELM-IREKPSD 237
I ++A E + + DV+SYG+ + ELM KP D
Sbjct: 175 VPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYD 215
>pdb|2JIV|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Compex With Hki-272
pdb|2JIV|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Compex With Hki-272
Length = 328
Score = 40.8 bits (94), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 32/101 (31%), Positives = 49/101 (48%), Gaps = 4/101 (3%)
Query: 138 IDVASALNYLHHDCQPVTAHCVLKPSNVLLDDDMTARVGDFGLARFLPPTRTQTSSIDVK 197
+ +A +NYL D + V H L NVL+ ++ DFGLA+ L + + K
Sbjct: 125 VQIAKGMNYLE-DRRLV--HRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGK 181
Query: 198 GSIGYIAPEYGVGNEVSTIGDVYSYGILLLELM-IREKPSD 237
I ++A E + + DV+SYG+ + ELM KP D
Sbjct: 182 VPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYD 222
>pdb|4I24|A Chain A, Structure Of T790m Egfr Kinase Domain Co-crystallized With
Dacomitinib
pdb|4I24|B Chain B, Structure Of T790m Egfr Kinase Domain Co-crystallized With
Dacomitinib
Length = 329
Score = 40.8 bits (94), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 30/101 (29%), Positives = 46/101 (45%), Gaps = 4/101 (3%)
Query: 138 IDVASALNYLHHDCQPVTAHCVLKPSNVLLDDDMTARVGDFGLARFLPPTRTQTSSIDVK 197
+ +A +NYL H L NVL+ ++ DFGLA+ L + + K
Sbjct: 126 VQIAKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGK 182
Query: 198 GSIGYIAPEYGVGNEVSTIGDVYSYGILLLELM-IREKPSD 237
I ++A E + + DV+SYG+ + ELM KP D
Sbjct: 183 VPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYD 223
>pdb|4G5P|A Chain A, Crystal Structure Of Egfr Kinase T790m In Complex With
Bibw2992
pdb|4G5P|B Chain B, Crystal Structure Of Egfr Kinase T790m In Complex With
Bibw2992
Length = 330
Score = 40.8 bits (94), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 30/101 (29%), Positives = 46/101 (45%), Gaps = 4/101 (3%)
Query: 138 IDVASALNYLHHDCQPVTAHCVLKPSNVLLDDDMTARVGDFGLARFLPPTRTQTSSIDVK 197
+ +A +NYL H L NVL+ ++ DFGLA+ L + + K
Sbjct: 127 VQIAKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGK 183
Query: 198 GSIGYIAPEYGVGNEVSTIGDVYSYGILLLELM-IREKPSD 237
I ++A E + + DV+SYG+ + ELM KP D
Sbjct: 184 VPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYD 224
>pdb|3LXK|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
pdb|3LXL|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
Length = 327
Score = 40.8 bits (94), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 25/75 (33%), Positives = 39/75 (52%), Gaps = 1/75 (1%)
Query: 157 HCVLKPSNVLLDDDMTARVGDFGLARFLPPTRTQTSSIDVKGS-IGYIAPEYGVGNEVST 215
H L N+L++ + ++ DFGLA+ LP + + S I + APE N S
Sbjct: 150 HRDLAARNILVESEAHVKIADFGLAKLLPLDKDYYVVREPGQSPIFWYAPESLSDNIFSR 209
Query: 216 IGDVYSYGILLLELM 230
DV+S+G++L EL
Sbjct: 210 QSDVWSFGVVLYELF 224
>pdb|2JIU|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Complex With Aee788
pdb|2JIU|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Complex With Aee788
Length = 328
Score = 40.8 bits (94), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 30/101 (29%), Positives = 46/101 (45%), Gaps = 4/101 (3%)
Query: 138 IDVASALNYLHHDCQPVTAHCVLKPSNVLLDDDMTARVGDFGLARFLPPTRTQTSSIDVK 197
+ +A +NYL H L NVL+ ++ DFGLA+ L + + K
Sbjct: 125 VQIAKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGK 181
Query: 198 GSIGYIAPEYGVGNEVSTIGDVYSYGILLLELM-IREKPSD 237
I ++A E + + DV+SYG+ + ELM KP D
Sbjct: 182 VPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYD 222
>pdb|2J5E|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With An
Irreversible Inhibitor 13-Jab
Length = 327
Score = 40.8 bits (94), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 32/101 (31%), Positives = 49/101 (48%), Gaps = 4/101 (3%)
Query: 138 IDVASALNYLHHDCQPVTAHCVLKPSNVLLDDDMTARVGDFGLARFLPPTRTQTSSIDVK 197
+ +A +NYL D + V H L NVL+ ++ DFGLA+ L + + K
Sbjct: 124 VQIAKGMNYLE-DRRLV--HRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGK 180
Query: 198 GSIGYIAPEYGVGNEVSTIGDVYSYGILLLELM-IREKPSD 237
I ++A E + + DV+SYG+ + ELM KP D
Sbjct: 181 VPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYD 221
>pdb|4AGC|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Axitinib (Ag-013736)
(N-Methyl-2-(
3-((E)-2-Pyridin-2-Yl-Vinyl)-1h-Indazol-6-Ylsulfanyl)-
Benzamide)
pdb|4AGD|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Sunitinib (Su11248) (N-2-
Diethylaminoethyl)-5-((Z)-(5-Fluoro-2-Oxo-1h-Indol-3-
Ylidene)methyl)-2,4-Dimethyl-1h-Pyrrole-3-Carboxamide)
pdb|4ASD|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Sorafenib (Bay 43-9006)
pdb|4ASE|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Tivozanib (Av-951)
Length = 353
Score = 40.8 bits (94), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 48/184 (26%), Positives = 81/184 (44%), Gaps = 28/184 (15%)
Query: 61 KSFIAECKALRNIRHR-NLIKVLTACLGVDYQGNDFKALVYEFMHNRSLKEWL------- 112
++ ++E K L +I H N++ +L AC G +V EF +L +L
Sbjct: 112 RALMSELKILIHIGHHLNVVNLLGACTK---PGGPLMVIV-EFCKFGNLSTYLRSKRNEF 167
Query: 113 --YPISKEDETYKRPXXXXXXXXXXIAIDVASALNYLHHDCQPVTAHCV---LKPSNVLL 167
Y ++ ED YK + VA + +L + C+ L N+LL
Sbjct: 168 VPYKVAPED-LYK--DFLTLEHLICYSFQVAKGMEFL------ASRKCIHRDLAARNILL 218
Query: 168 DDDMTARVGDFGLARFLPPTRTQTSSIDVKGSIGYIAPEYGVGNEVSTI-GDVYSYGILL 226
+ ++ DFGLAR + D + + ++APE + + V TI DV+S+G+LL
Sbjct: 219 SEKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPE-TIFDRVYTIQSDVWSFGVLL 277
Query: 227 LELM 230
E+
Sbjct: 278 WEIF 281
>pdb|3B2T|A Chain A, Structure Of Phosphotransferase
pdb|3B2T|B Chain B, Structure Of Phosphotransferase
Length = 311
Score = 40.8 bits (94), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 43/183 (23%), Positives = 80/183 (43%), Gaps = 33/183 (18%)
Query: 63 FIAECKALRNI-RHRNLIKVLTACLGVDYQGNDFKALVYEFMHNRSLKEWL--------- 112
++E + ++ I +H+N+I +L AC Q +V E+ +L+E+L
Sbjct: 74 LVSEMEMMKMIGKHKNIINLLGACT----QDGPLYVIV-EYASKGNLREYLRARRPPGME 128
Query: 113 --YPISK---EDETYKRPXXXXXXXXXXIAIDVASALNYL-HHDCQPVTAHCVLKPSNVL 166
Y I++ E T+K +A + YL C H L NVL
Sbjct: 129 YSYDINRVPEEQMTFK--------DLVSCTYQLARGMEYLASQKC----IHRDLTARNVL 176
Query: 167 LDDDMTARVGDFGLARFLPPTRTQTSSIDVKGSIGYIAPEYGVGNEVSTIGDVYSYGILL 226
+ ++ ++ DFGLAR + + + + + ++APE + DV+S+G+L+
Sbjct: 177 VTENNVMKIADFGLARDINNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLM 236
Query: 227 LEL 229
E+
Sbjct: 237 WEI 239
>pdb|2JIT|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation
pdb|2JIT|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation
Length = 327
Score = 40.8 bits (94), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 30/101 (29%), Positives = 46/101 (45%), Gaps = 4/101 (3%)
Query: 138 IDVASALNYLHHDCQPVTAHCVLKPSNVLLDDDMTARVGDFGLARFLPPTRTQTSSIDVK 197
+ +A +NYL H L NVL+ ++ DFGLA+ L + + K
Sbjct: 124 VQIAKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGK 180
Query: 198 GSIGYIAPEYGVGNEVSTIGDVYSYGILLLELM-IREKPSD 237
I ++A E + + DV+SYG+ + ELM KP D
Sbjct: 181 VPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYD 221
>pdb|2GU8|A Chain A, Discovery Of 2-pyrimidyl-5-amidothiophenes As Novel And
Potent Inhibitors For Akt: Synthesis And Sar Studies
Length = 337
Score = 40.8 bits (94), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 30/119 (25%), Positives = 56/119 (47%), Gaps = 18/119 (15%)
Query: 160 LKPSNVLLDDDMTARVGDFGLARFLPPTRTQTSSIDVKGSIGYIAPEYGVGNEVSTIGDV 219
LKP N+L+D+ +V DFG A+ R + + + G+ Y+APE + + D
Sbjct: 154 LKPENLLIDEQGYIQVTDFGFAK-----RVKGRTWXLCGTPEYLAPEIILSKGYNKAVDW 208
Query: 220 YSYGILLLELMIREKPSDIMFEGDMNLHKFAKMA---------LSNHVKDIVDSILLND 269
++ G+L+ E+ P F D + + K+ S+ +KD++ ++L D
Sbjct: 209 WALGVLIYEMAAGYPP----FFADQPIQIYEKIVSGKVRFPSHFSSDLKDLLRNLLQVD 263
>pdb|2ITN|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Amp-Pnp
pdb|2ITO|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Iressa
pdb|2ITP|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Aee788
pdb|2ITQ|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Afn941
Length = 327
Score = 40.8 bits (94), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 30/101 (29%), Positives = 46/101 (45%), Gaps = 4/101 (3%)
Query: 138 IDVASALNYLHHDCQPVTAHCVLKPSNVLLDDDMTARVGDFGLARFLPPTRTQTSSIDVK 197
+ +A +NYL H L NVL+ ++ DFGLA+ L + + K
Sbjct: 124 VQIAKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGK 180
Query: 198 GSIGYIAPEYGVGNEVSTIGDVYSYGILLLELM-IREKPSD 237
I ++A E + + DV+SYG+ + ELM KP D
Sbjct: 181 VPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYD 221
>pdb|2GS7|A Chain A, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|2GS7|B Chain B, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|A Chain A, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|B Chain B, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|C Chain C, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|D Chain D, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
Length = 330
Score = 40.8 bits (94), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 30/101 (29%), Positives = 46/101 (45%), Gaps = 4/101 (3%)
Query: 138 IDVASALNYLHHDCQPVTAHCVLKPSNVLLDDDMTARVGDFGLARFLPPTRTQTSSIDVK 197
+ +A +NYL H L NVL+ ++ DFGLA+ L + + K
Sbjct: 127 VQIAKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGK 183
Query: 198 GSIGYIAPEYGVGNEVSTIGDVYSYGILLLELM-IREKPSD 237
I ++A E + + DV+SYG+ + ELM KP D
Sbjct: 184 VPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYD 224
>pdb|3UG1|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN The Apo Form
pdb|3UG2|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN Complex With Gefitinib
pdb|3VJN|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN Complex With Amppnp
Length = 334
Score = 40.4 bits (93), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 30/101 (29%), Positives = 46/101 (45%), Gaps = 4/101 (3%)
Query: 138 IDVASALNYLHHDCQPVTAHCVLKPSNVLLDDDMTARVGDFGLARFLPPTRTQTSSIDVK 197
+ +A +NYL H L NVL+ ++ DFGLA+ L + + K
Sbjct: 131 VQIAKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGK 187
Query: 198 GSIGYIAPEYGVGNEVSTIGDVYSYGILLLELM-IREKPSD 237
I ++A E + + DV+SYG+ + ELM KP D
Sbjct: 188 VPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYD 228
>pdb|2PSQ|A Chain A, Crystal Structure Of Unphosphorylated Unactivated Wild
Type Fgf Receptor 2 (Fgfr2) Kinase Domain
pdb|2PSQ|B Chain B, Crystal Structure Of Unphosphorylated Unactivated Wild
Type Fgf Receptor 2 (Fgfr2) Kinase Domain
Length = 370
Score = 40.4 bits (93), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 43/184 (23%), Positives = 80/184 (43%), Gaps = 29/184 (15%)
Query: 60 FKSFIAECKALRNI-RHRNLIKVLTACLG-------VDYQGNDFKALVYEFMHNRSLK-- 109
++E + ++ I +H+N+I +L AC V+Y K + E++ R
Sbjct: 130 LSDLVSEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYAS---KGNLREYLRARRPPGM 186
Query: 110 EWLYPISK---EDETYKRPXXXXXXXXXXIAIDVASALNYL-HHDCQPVTAHCVLKPSNV 165
E+ Y I++ E T+K +A + YL C H L NV
Sbjct: 187 EYSYDINRVPEEQMTFK--------DLVSCTYQLARGMEYLASQKC----IHRDLAARNV 234
Query: 166 LLDDDMTARVGDFGLARFLPPTRTQTSSIDVKGSIGYIAPEYGVGNEVSTIGDVYSYGIL 225
L+ ++ ++ DFGLAR + + + + + ++APE + DV+S+G+L
Sbjct: 235 LVTENNVMKIADFGLARDINNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVL 294
Query: 226 LLEL 229
+ E+
Sbjct: 295 MWEI 298
>pdb|2RFD|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFD|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|C Chain C, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|D Chain D, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
Length = 324
Score = 40.4 bits (93), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 32/101 (31%), Positives = 49/101 (48%), Gaps = 4/101 (3%)
Query: 138 IDVASALNYLHHDCQPVTAHCVLKPSNVLLDDDMTARVGDFGLARFLPPTRTQTSSIDVK 197
+ +A +NYL D + V H L NVL+ ++ DFGLA+ L + + K
Sbjct: 121 VQIAEGMNYLE-DRRLV--HRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGK 177
Query: 198 GSIGYIAPEYGVGNEVSTIGDVYSYGILLLELM-IREKPSD 237
I ++A E + + DV+SYG+ + ELM KP D
Sbjct: 178 VPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYD 218
>pdb|3PJC|A Chain A, Crystal Structure Of Jak3 Complexed With A Potent Atp Site
Inhibitor Showing High Selectivity Within The Janus
Kinase Family
Length = 315
Score = 40.4 bits (93), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 25/75 (33%), Positives = 39/75 (52%), Gaps = 1/75 (1%)
Query: 157 HCVLKPSNVLLDDDMTARVGDFGLARFLPPTRTQTSSIDVKGS-IGYIAPEYGVGNEVST 215
H L N+L++ + ++ DFGLA+ LP + + S I + APE N S
Sbjct: 138 HRDLAARNILVESEAHVKIADFGLAKLLPLDKDYYVVREPGQSPIFWYAPESLSDNIFSR 197
Query: 216 IGDVYSYGILLLELM 230
DV+S+G++L EL
Sbjct: 198 QSDVWSFGVVLYELF 212
>pdb|4G5J|A Chain A, Crystal Structure Of Egfr Kinase In Complex With Bibw2992
Length = 330
Score = 40.4 bits (93), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 30/101 (29%), Positives = 46/101 (45%), Gaps = 4/101 (3%)
Query: 138 IDVASALNYLHHDCQPVTAHCVLKPSNVLLDDDMTARVGDFGLARFLPPTRTQTSSIDVK 197
+ +A +NYL H L NVL+ ++ DFGLA+ L + + K
Sbjct: 127 VQIAKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGK 183
Query: 198 GSIGYIAPEYGVGNEVSTIGDVYSYGILLLELM-IREKPSD 237
I ++A E + + DV+SYG+ + ELM KP D
Sbjct: 184 VPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYD 224
>pdb|2JKM|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 40.4 bits (93), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 25/95 (26%), Positives = 49/95 (51%), Gaps = 4/95 (4%)
Query: 137 AIDVASALNYLHHDCQPVTAHCVLKPSNVLLDDDMTARVGDFGLARFLPPTRTQTSSIDV 196
A +++AL YL H + NVL+ + ++GDFGL+R++ + T +
Sbjct: 117 AYQLSTALAYLESK---RFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDS-TYYKASKG 172
Query: 197 KGSIGYIAPEYGVGNEVSTIGDVYSYGILLLELMI 231
K I ++APE ++ DV+ +G+ + E+++
Sbjct: 173 KLPIKWMAPESINFRRFTSASDVWMFGVCMWEILM 207
>pdb|3BZ3|A Chain A, Crystal Structure Analysis Of Focal Adhesion Kinase With A
Methanesulfonamide Diaminopyrimidine Inhibitor
Length = 276
Score = 40.4 bits (93), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 25/95 (26%), Positives = 49/95 (51%), Gaps = 4/95 (4%)
Query: 137 AIDVASALNYLHHDCQPVTAHCVLKPSNVLLDDDMTARVGDFGLARFLPPTRTQTSSIDV 196
A +++AL YL H + NVL+ + ++GDFGL+R++ + T +
Sbjct: 114 AYQLSTALAYLESK---RFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDS-TYYKASKG 169
Query: 197 KGSIGYIAPEYGVGNEVSTIGDVYSYGILLLELMI 231
K I ++APE ++ DV+ +G+ + E+++
Sbjct: 170 KLPIKWMAPESINFRRFTSASDVWMFGVCMWEILM 204
>pdb|2EB2|A Chain A, Crystal Structure Of Mutated Egfr Kinase Domain (G719s)
Length = 334
Score = 40.4 bits (93), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 32/101 (31%), Positives = 49/101 (48%), Gaps = 4/101 (3%)
Query: 138 IDVASALNYLHHDCQPVTAHCVLKPSNVLLDDDMTARVGDFGLARFLPPTRTQTSSIDVK 197
+ +A +NYL D + V H L NVL+ ++ DFGLA+ L + + K
Sbjct: 131 VQIAKGMNYLE-DRRLV--HRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGK 187
Query: 198 GSIGYIAPEYGVGNEVSTIGDVYSYGILLLELM-IREKPSD 237
I ++A E + + DV+SYG+ + ELM KP D
Sbjct: 188 VPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYD 228
>pdb|2J5F|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With An
Irreversible Inhibitor 34-Jab
pdb|2ITW|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Afn941
pdb|2ITX|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Amp- Pnp
pdb|2ITY|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Iressa
pdb|2J6M|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Aee788
pdb|3POZ|A Chain A, Egfr Kinase Domain Complexed With Tak-285
Length = 327
Score = 40.4 bits (93), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 30/101 (29%), Positives = 46/101 (45%), Gaps = 4/101 (3%)
Query: 138 IDVASALNYLHHDCQPVTAHCVLKPSNVLLDDDMTARVGDFGLARFLPPTRTQTSSIDVK 197
+ +A +NYL H L NVL+ ++ DFGLA+ L + + K
Sbjct: 124 VQIAKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGK 180
Query: 198 GSIGYIAPEYGVGNEVSTIGDVYSYGILLLELM-IREKPSD 237
I ++A E + + DV+SYG+ + ELM KP D
Sbjct: 181 VPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYD 221
>pdb|2GS2|A Chain A, Crystal Structure Of The Active Egfr Kinase Domain
pdb|2GS6|A Chain A, Crystal Structure Of The Active Egfr Kinase Domain In
Complex With An Atp Analog-Peptide Conjugate
pdb|2RF9|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RF9|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|3W2S|A Chain A, Egfr Kinase Domain With Compound4
Length = 330
Score = 40.4 bits (93), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 30/101 (29%), Positives = 46/101 (45%), Gaps = 4/101 (3%)
Query: 138 IDVASALNYLHHDCQPVTAHCVLKPSNVLLDDDMTARVGDFGLARFLPPTRTQTSSIDVK 197
+ +A +NYL H L NVL+ ++ DFGLA+ L + + K
Sbjct: 127 VQIAKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGK 183
Query: 198 GSIGYIAPEYGVGNEVSTIGDVYSYGILLLELM-IREKPSD 237
I ++A E + + DV+SYG+ + ELM KP D
Sbjct: 184 VPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYD 224
>pdb|3VJO|A Chain A, Crystal Structure Of The Wild-Type Egfr Kinase Domain In
Complex With Amppnp
Length = 334
Score = 40.4 bits (93), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 32/101 (31%), Positives = 49/101 (48%), Gaps = 4/101 (3%)
Query: 138 IDVASALNYLHHDCQPVTAHCVLKPSNVLLDDDMTARVGDFGLARFLPPTRTQTSSIDVK 197
+ +A +NYL D + V H L NVL+ ++ DFGLA+ L + + K
Sbjct: 131 VQIAKGMNYLE-DRRLV--HRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGK 187
Query: 198 GSIGYIAPEYGVGNEVSTIGDVYSYGILLLELM-IREKPSD 237
I ++A E + + DV+SYG+ + ELM KP D
Sbjct: 188 VPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYD 228
>pdb|4I23|A Chain A, Crystal Structure Of The Wild-type Egfr Kinase Domain In
Complex With Dacomitinib (soaked)
Length = 329
Score = 40.4 bits (93), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 30/101 (29%), Positives = 46/101 (45%), Gaps = 4/101 (3%)
Query: 138 IDVASALNYLHHDCQPVTAHCVLKPSNVLLDDDMTARVGDFGLARFLPPTRTQTSSIDVK 197
+ +A +NYL H L NVL+ ++ DFGLA+ L + + K
Sbjct: 126 VQIAKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGK 182
Query: 198 GSIGYIAPEYGVGNEVSTIGDVYSYGILLLELM-IREKPSD 237
I ++A E + + DV+SYG+ + ELM KP D
Sbjct: 183 VPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYD 223
>pdb|1M14|A Chain A, Tyrosine Kinase Domain From Epidermal Growth Factor
Receptor
pdb|1M17|A Chain A, Epidermal Growth Factor Receptor Tyrosine Kinase Domain
With 4-Anilinoquinazoline Inhibitor Erlotinib
Length = 333
Score = 40.4 bits (93), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 32/101 (31%), Positives = 49/101 (48%), Gaps = 4/101 (3%)
Query: 138 IDVASALNYLHHDCQPVTAHCVLKPSNVLLDDDMTARVGDFGLARFLPPTRTQTSSIDVK 197
+ +A +NYL D + V H L NVL+ ++ DFGLA+ L + + K
Sbjct: 130 VQIAKGMNYLE-DRRLV--HRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGK 186
Query: 198 GSIGYIAPEYGVGNEVSTIGDVYSYGILLLELM-IREKPSD 237
I ++A E + + DV+SYG+ + ELM KP D
Sbjct: 187 VPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYD 227
>pdb|2ETM|A Chain A, Crystal Structure Of Focal Adhesion Kinase Domain
Complexed With 7h-Pyrrolo [2,3-D] Pyrimidine Derivative
pdb|2ETM|B Chain B, Crystal Structure Of Focal Adhesion Kinase Domain
Complexed With 7h-Pyrrolo [2,3-D] Pyrimidine Derivative
pdb|2IJM|A Chain A, Crystal Structure Of Focal Adhesion Kinase Domain With 2
Molecules In The Asymmetric Unit Complexed With Adp And
Atp
pdb|2IJM|B Chain B, Crystal Structure Of Focal Adhesion Kinase Domain With 2
Molecules In The Asymmetric Unit Complexed With Adp And
Atp
Length = 281
Score = 40.4 bits (93), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 25/95 (26%), Positives = 49/95 (51%), Gaps = 4/95 (4%)
Query: 137 AIDVASALNYLHHDCQPVTAHCVLKPSNVLLDDDMTARVGDFGLARFLPPTRTQTSSIDV 196
A +++AL YL H + NVL+ + ++GDFGL+R++ + T +
Sbjct: 119 AYQLSTALAYLESK---RFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDS-TYYKASKG 174
Query: 197 KGSIGYIAPEYGVGNEVSTIGDVYSYGILLLELMI 231
K I ++APE ++ DV+ +G+ + E+++
Sbjct: 175 KLPIKWMAPESINFRRFTSASDVWMFGVCMWEILM 209
>pdb|2YJR|A Chain A, Structure Of F1174l Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 40.4 bits (93), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 44/179 (24%), Positives = 75/179 (41%), Gaps = 30/179 (16%)
Query: 63 FIAECKALRNIRHRNLIKVLTACLGVDYQGNDFKALVYEFMHNRSLKEWLYPISKEDETY 122
F+ E + + H+N+++ C+GV Q + ++ E M LK +L ET
Sbjct: 95 FLMEALIISKLNHQNIVR----CIGVSLQSLP-RFILLELMAGGDLKSFL------RETR 143
Query: 123 KRPXXXXXXXXX---XIAIDVASALNYLHHDCQPVTAHCVLKPSNVLL---DDDMTARVG 176
RP +A D+A YL + H + N LL A++G
Sbjct: 144 PRPSQPSSLAMLDLLHVARDIACGCQYLEEN---HFIHRDIAARNCLLTCPGPGRVAKIG 200
Query: 177 DFGLARFLPPTRTQTSSIDVKGS-----IGYIAPEYGVGNEVSTIGDVYSYGILLLELM 230
DFG+AR + +S KG + ++ PE + ++ D +S+G+LL E+
Sbjct: 201 DFGMARDI-----YRASYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIF 254
>pdb|2J0M|B Chain B, Crystal Structure A Two-Chain Complex Between The Ferm And
Kinase Domains Of Focal Adhesion Kinase.
pdb|2JKQ|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 40.4 bits (93), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 25/95 (26%), Positives = 49/95 (51%), Gaps = 4/95 (4%)
Query: 137 AIDVASALNYLHHDCQPVTAHCVLKPSNVLLDDDMTARVGDFGLARFLPPTRTQTSSIDV 196
A +++AL YL H + NVL+ + ++GDFGL+R++ + T +
Sbjct: 117 AYQLSTALAYLESK---RFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDS-TYYKASKG 172
Query: 197 KGSIGYIAPEYGVGNEVSTIGDVYSYGILLLELMI 231
K I ++APE ++ DV+ +G+ + E+++
Sbjct: 173 KLPIKWMAPESINFRRFTSASDVWMFGVCMWEILM 207
>pdb|2J0J|A Chain A, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains
Length = 656
Score = 40.4 bits (93), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 25/95 (26%), Positives = 49/95 (51%), Gaps = 4/95 (4%)
Query: 137 AIDVASALNYLHHDCQPVTAHCVLKPSNVLLDDDMTARVGDFGLARFLPPTRTQTSSIDV 196
A +++AL YL H + NVL+ + ++GDFGL+R++ + T +
Sbjct: 497 AYQLSTALAYLESK---RFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDS-TYYKASKG 552
Query: 197 KGSIGYIAPEYGVGNEVSTIGDVYSYGILLLELMI 231
K I ++APE ++ DV+ +G+ + E+++
Sbjct: 553 KLPIKWMAPESINFRRFTSASDVWMFGVCMWEILM 587
>pdb|1O6L|A Chain A, Crystal Structure Of An Activated Akt/protein Kinase B
(pkb-pif Chimera) Ternary Complex With Amp-pnp And Gsk3
Peptide
Length = 337
Score = 40.4 bits (93), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 42/172 (24%), Positives = 70/172 (40%), Gaps = 20/172 (11%)
Query: 64 IAECKALRNIRHRNLIKVLTACLGVDYQGNDFKALVYEFMHNRSLKEWLYPISKEDETYK 123
+ E + L+N RH LTA L +Q +D V E+ + L + +S+E
Sbjct: 53 VTESRVLQNTRH----PFLTA-LKYAFQTHDRLCFVMEYANGGEL---FFHLSRE----- 99
Query: 124 RPXXXXXXXXXXIAIDVASALNYLHHDCQPVTAHCVLKPSNVLLDDDMTARVGDFGLARF 183
++ SAL YLH + +K N++LD D ++ DFGL +
Sbjct: 100 --RVFTEERARFYGAEIVSALEYLH---SRDVVYRDIKLENLMLDKDGHIKITDFGLCK- 153
Query: 184 LPPTRTQTSSIDVKGSIGYIAPEYGVGNEVSTIGDVYSYGILLLELMIREKP 235
+ G+ Y+APE N+ D + G+++ E+M P
Sbjct: 154 -EGISDGATMKXFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLP 204
>pdb|4DFY|A Chain A, Crystal Structure Of R194a Mutant Of Camp-Dependent
Protein Kinase With Unphosphorylated Activation Loop
pdb|4DFY|E Chain E, Crystal Structure Of R194a Mutant Of Camp-Dependent
Protein Kinase With Unphosphorylated Activation Loop
Length = 371
Score = 40.4 bits (93), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 30/119 (25%), Positives = 56/119 (47%), Gaps = 18/119 (15%)
Query: 160 LKPSNVLLDDDMTARVGDFGLARFLPPTRTQTSSIDVKGSIGYIAPEYGVGNEVSTIGDV 219
LKP N+L+D +V DFG A+ R + ++ + G+ Y+APE + + D
Sbjct: 188 LKPENLLIDQQGYIQVTDFGFAK-----RVKGATWTLCGTPEYLAPEIILSKGYNKAVDW 242
Query: 220 YSYGILLLELMIREKPSDIMFEGDMNLHKFAKMA---------LSNHVKDIVDSILLND 269
++ G+L+ E+ P F D + + K+ S+ +KD++ ++L D
Sbjct: 243 WALGVLIYEMAAGYPP----FFADQPIQIYEKIVSGKVRFPSHFSSDLKDLLRNLLQVD 297
>pdb|3PXK|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Pyrrolo[2,3- D]thiazole
pdb|3PXK|B Chain B, Focal Adhesion Kinase Catalytic Domain In Complex With
Pyrrolo[2,3- D]thiazole
Length = 282
Score = 40.4 bits (93), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 25/95 (26%), Positives = 49/95 (51%), Gaps = 4/95 (4%)
Query: 137 AIDVASALNYLHHDCQPVTAHCVLKPSNVLLDDDMTARVGDFGLARFLPPTRTQTSSIDV 196
A +++AL YL H + NVL+ + ++GDFGL+R++ + T +
Sbjct: 120 AYQLSTALAYLESK---RFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDS-TYYKASKG 175
Query: 197 KGSIGYIAPEYGVGNEVSTIGDVYSYGILLLELMI 231
K I ++APE ++ DV+ +G+ + E+++
Sbjct: 176 KLPIKWMAPESINFRRFTSASDVWMFGVCMWEILM 210
>pdb|4AN2|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4AN3|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4AN9|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4ANB|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs
Length = 301
Score = 40.4 bits (93), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 30/121 (24%), Positives = 54/121 (44%), Gaps = 6/121 (4%)
Query: 119 DETYKRPXXXXXXXXXXIAIDVASALNYLHHDCQPVTAHCVLKPSNVLLDDDMTARVGDF 178
D+ K+ ++I V L YL + H +KPSN+L++ ++ DF
Sbjct: 95 DQVLKKAGRIPEQILGKVSIAVIKGLTYLREKHK--IMHRDVKPSNILVNSRGEIKLCDF 152
Query: 179 GLARFLPPTRTQTSSIDVKGSIGYIAPEYGVGNEVSTIGDVYSYGILLLELMIREKPSDI 238
G++ L + + G+ Y++PE G S D++S G+ L+E+ + P
Sbjct: 153 GVSGQL----IDEMANEFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYPRPP 208
Query: 239 M 239
M
Sbjct: 209 M 209
>pdb|1RJB|A Chain A, Crystal Structure Of Flt3
Length = 344
Score = 40.4 bits (93), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 27/95 (28%), Positives = 41/95 (43%), Gaps = 3/95 (3%)
Query: 136 IAIDVASALNYLHHDCQPVTAHCVLKPSNVLLDDDMTARVGDFGLARFLPPTRTQTSSID 195
A VA + +L H L NVL+ ++ DFGLAR + +
Sbjct: 177 FAYQVAKGMEFLEFKS---CVHRDLAARNVLVTHGKVVKICDFGLARDIMSDSNYVVRGN 233
Query: 196 VKGSIGYIAPEYGVGNEVSTIGDVYSYGILLLELM 230
+ + ++APE + DV+SYGILL E+
Sbjct: 234 ARLPVKWMAPESLFEGIYTIKSDVWSYGILLWEIF 268
>pdb|4DCE|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With A Piperidine-Carboxamide Inhibitor
pdb|4DCE|B Chain B, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With A Piperidine-Carboxamide Inhibitor
pdb|4FOD|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 36
Length = 333
Score = 40.4 bits (93), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 44/179 (24%), Positives = 74/179 (41%), Gaps = 30/179 (16%)
Query: 63 FIAECKALRNIRHRNLIKVLTACLGVDYQGNDFKALVYEFMHNRSLKEWLYPISKEDETY 122
F+ E + H+N+++ C+GV Q + ++ E M LK +L ET
Sbjct: 87 FLMEALIISKFNHQNIVR----CIGVSLQSLP-RFILLELMAGGDLKSFL------RETR 135
Query: 123 KRPXXXXXXXXX---XIAIDVASALNYLHHDCQPVTAHCVLKPSNVLL---DDDMTARVG 176
RP +A D+A YL + H + N LL A++G
Sbjct: 136 PRPSQPSSLAMLDLLHVARDIACGCQYLEEN---HFIHRDIAARNCLLTCPGPGRVAKIG 192
Query: 177 DFGLARFLPPTRTQTSSIDVKGS-----IGYIAPEYGVGNEVSTIGDVYSYGILLLELM 230
DFG+AR + +S KG + ++ PE + ++ D +S+G+LL E+
Sbjct: 193 DFGMARDI-----YRASYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIF 246
>pdb|3IKA|A Chain A, Crystal Structure Of Egfr 696-1022 T790m Mutant Covalently
Binding To Wz4002
pdb|3IKA|B Chain B, Crystal Structure Of Egfr 696-1022 T790m Mutant Covalently
Binding To Wz4002
Length = 331
Score = 40.4 bits (93), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 30/101 (29%), Positives = 46/101 (45%), Gaps = 4/101 (3%)
Query: 138 IDVASALNYLHHDCQPVTAHCVLKPSNVLLDDDMTARVGDFGLARFLPPTRTQTSSIDVK 197
+ +A +NYL H L NVL+ ++ DFGLA+ L + + K
Sbjct: 128 VQIAKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGK 184
Query: 198 GSIGYIAPEYGVGNEVSTIGDVYSYGILLLELM-IREKPSD 237
I ++A E + + DV+SYG+ + ELM KP D
Sbjct: 185 VPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYD 225
>pdb|1XH9|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 40.4 bits (93), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 30/119 (25%), Positives = 56/119 (47%), Gaps = 18/119 (15%)
Query: 160 LKPSNVLLDDDMTARVGDFGLARFLPPTRTQTSSIDVKGSIGYIAPEYGVGNEVSTIGDV 219
LKP N+++D +V DFGLA+ R + + + G+ Y+APE + + D
Sbjct: 167 LKPENLMIDQQGYIKVTDFGLAK-----RVKGRTWXLCGTPEYLAPEIILSKGYNKAVDW 221
Query: 220 YSYGILLLELMIREKPSDIMFEGDMNLHKFAKMA---------LSNHVKDIVDSILLND 269
++ G+L+ E+ P F D + + K+ S+ +KD++ ++L D
Sbjct: 222 WALGVLIYEMAAGYPP----FFADQPIQIYEKIVSGKVRFPSHFSSDLKDLLRNLLQVD 276
>pdb|1XKK|A Chain A, Egfr Kinase Domain Complexed With A Quinazoline Inhibitor-
Gw572016
Length = 352
Score = 40.4 bits (93), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 30/101 (29%), Positives = 46/101 (45%), Gaps = 4/101 (3%)
Query: 138 IDVASALNYLHHDCQPVTAHCVLKPSNVLLDDDMTARVGDFGLARFLPPTRTQTSSIDVK 197
+ +A +NYL H L NVL+ ++ DFGLA+ L + + K
Sbjct: 149 VQIAKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGK 205
Query: 198 GSIGYIAPEYGVGNEVSTIGDVYSYGILLLELM-IREKPSD 237
I ++A E + + DV+SYG+ + ELM KP D
Sbjct: 206 VPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYD 246
>pdb|4FOB|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 1
pdb|4FOC|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 2
Length = 353
Score = 40.4 bits (93), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 44/179 (24%), Positives = 74/179 (41%), Gaps = 30/179 (16%)
Query: 63 FIAECKALRNIRHRNLIKVLTACLGVDYQGNDFKALVYEFMHNRSLKEWLYPISKEDETY 122
F+ E + H+N+++ C+GV Q + ++ E M LK +L ET
Sbjct: 107 FLMEALIISKFNHQNIVR----CIGVSLQSLP-RFILLELMAGGDLKSFL------RETR 155
Query: 123 KRPXXXXXXXXX---XIAIDVASALNYLHHDCQPVTAHCVLKPSNVLLD---DDMTARVG 176
RP +A D+A YL + H + N LL A++G
Sbjct: 156 PRPSQPSSLAMLDLLHVARDIACGCQYLEEN---HFIHRDIAARNCLLTCPGPGRVAKIG 212
Query: 177 DFGLARFLPPTRTQTSSIDVKGS-----IGYIAPEYGVGNEVSTIGDVYSYGILLLELM 230
DFG+AR + +S KG + ++ PE + ++ D +S+G+LL E+
Sbjct: 213 DFGMARDI-----YRASYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIF 266
>pdb|3AOX|A Chain A, X-Ray Crystal Structure Of Human Anaplastic Lymphoma
Kinase In Complex With Ch5424802
Length = 344
Score = 40.4 bits (93), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 44/179 (24%), Positives = 74/179 (41%), Gaps = 30/179 (16%)
Query: 63 FIAECKALRNIRHRNLIKVLTACLGVDYQGNDFKALVYEFMHNRSLKEWLYPISKEDETY 122
F+ E + H+N+++ C+GV Q + ++ E M LK +L ET
Sbjct: 97 FLMEALIISKFNHQNIVR----CIGVSLQSLP-RFILLELMAGGDLKSFL------RETR 145
Query: 123 KRPXXXXXXXXX---XIAIDVASALNYLHHDCQPVTAHCVLKPSNVLL---DDDMTARVG 176
RP +A D+A YL + H + N LL A++G
Sbjct: 146 PRPSQPSSLAMLDLLHVARDIACGCQYLEEN---HFIHRDIAARNCLLTCPGPGRVAKIG 202
Query: 177 DFGLARFLPPTRTQTSSIDVKGS-----IGYIAPEYGVGNEVSTIGDVYSYGILLLELM 230
DFG+AR + +S KG + ++ PE + ++ D +S+G+LL E+
Sbjct: 203 DFGMARDI-----YRASYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIF 256
>pdb|2ZOQ|A Chain A, Structural Dissection Of Human Mitogen-Activated Kinase
Erk1
pdb|2ZOQ|B Chain B, Structural Dissection Of Human Mitogen-Activated Kinase
Erk1
Length = 382
Score = 40.4 bits (93), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 37/127 (29%), Positives = 59/127 (46%), Gaps = 15/127 (11%)
Query: 140 VASALNYLHHDCQPVTAHCVLKPSNVLLDDDMTARVGDFGLARFLPPTRTQTSSI-DVKG 198
+ L Y+H H LKPSN+L++ ++ DFGLAR P T + +
Sbjct: 153 ILRGLKYIH---SANVLHRDLKPSNLLINTTCDLKICDFGLARIADPEHDHTGFLTEXVA 209
Query: 199 SIGYIAPEYGVGNEVSTIG-DVYSYGILLLELMIREKPSDIMFEGDMNLHKFAKMALSNH 257
+ Y APE + ++ T D++S G +L E M+ +P +F G L + NH
Sbjct: 210 TRWYRAPEIMLNSKGYTKSIDIWSVGCILAE-MLSNRP---IFPGKHYLDQL------NH 259
Query: 258 VKDIVDS 264
+ I+ S
Sbjct: 260 ILGILGS 266
>pdb|3RI1|A Chain A, Crystal Structure Of The Catalytic Domain Of Fgfr2 Kinase
In Complex With Arq 069
pdb|3RI1|B Chain B, Crystal Structure Of The Catalytic Domain Of Fgfr2 Kinase
In Complex With Arq 069
Length = 313
Score = 40.4 bits (93), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 43/183 (23%), Positives = 80/183 (43%), Gaps = 33/183 (18%)
Query: 63 FIAECKALRNI-RHRNLIKVLTACLGVDYQGNDFKALVYEFMHNRSLKEWL--------- 112
++E + ++ I +H+N+I +L AC Q +V E+ +L+E+L
Sbjct: 76 LVSEMEMMKMIGKHKNIINLLGACT----QDGPLYVIV-EYASKGNLREYLRARRPPGME 130
Query: 113 --YPISK---EDETYKRPXXXXXXXXXXIAIDVASALNYL-HHDCQPVTAHCVLKPSNVL 166
Y I++ E T+K +A + YL C H L NVL
Sbjct: 131 YSYDINRVPEEQMTFK--------DLVSCTYQLARGMEYLASQKC----IHRDLAARNVL 178
Query: 167 LDDDMTARVGDFGLARFLPPTRTQTSSIDVKGSIGYIAPEYGVGNEVSTIGDVYSYGILL 226
+ ++ ++ DFGLAR + + + + + ++APE + DV+S+G+L+
Sbjct: 179 VTENNVMKIADFGLARDINNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLM 238
Query: 227 LEL 229
E+
Sbjct: 239 WEI 241
>pdb|2YFX|A Chain A, Structure Of L1196m Mutant Anaplastic Lymphoma Kinase In
Complex With Crizotinib
Length = 327
Score = 40.4 bits (93), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 44/179 (24%), Positives = 74/179 (41%), Gaps = 30/179 (16%)
Query: 63 FIAECKALRNIRHRNLIKVLTACLGVDYQGNDFKALVYEFMHNRSLKEWLYPISKEDETY 122
F+ E + H+N+++ C+GV Q + ++ E M LK +L ET
Sbjct: 80 FLMEALIISKFNHQNIVR----CIGVSLQSLP-RFILMELMAGGDLKSFL------RETR 128
Query: 123 KRPXXXXXXXXX---XIAIDVASALNYLHHDCQPVTAHCVLKPSNVLL---DDDMTARVG 176
RP +A D+A YL + H + N LL A++G
Sbjct: 129 PRPSQPSSLAMLDLLHVARDIACGCQYLEEN---HFIHRDIAARNCLLTCPGPGRVAKIG 185
Query: 177 DFGLARFLPPTRTQTSSIDVKGS-----IGYIAPEYGVGNEVSTIGDVYSYGILLLELM 230
DFG+AR + +S KG + ++ PE + ++ D +S+G+LL E+
Sbjct: 186 DFGMARDI-----YRASYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIF 239
>pdb|3NPC|A Chain A, Crystal Structure Of Jnk2 Complexed With Birb796
pdb|3NPC|B Chain B, Crystal Structure Of Jnk2 Complexed With Birb796
Length = 364
Score = 40.4 bits (93), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 28/96 (29%), Positives = 50/96 (52%), Gaps = 7/96 (7%)
Query: 157 HCVLKPSNVLLDDDMTARVGDFGLARFLPPTRTQTSSIDVKGSIGYIAPEYGVGNEVSTI 216
H LKPSN+++ D T ++ DFGLAR T + + Y APE +G +
Sbjct: 149 HRDLKPSNIVVKSDCTLKILDFGLARTACTNFMMTPYVVTR---YYRAPEVILGMGYAAN 205
Query: 217 GDVYSYGILLLELMIREKPSDIMFEGDMNLHKFAKM 252
D++S G ++ EL+ ++F+G ++ ++ K+
Sbjct: 206 VDIWSVGCIMGELV----KGCVIFQGTDHIDQWNKV 237
>pdb|3EWH|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridyl-Pyrimidine Benzimidazole Inhibitor
Length = 314
Score = 40.4 bits (93), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 25/75 (33%), Positives = 40/75 (53%), Gaps = 2/75 (2%)
Query: 157 HCVLKPSNVLLDDDMTARVGDFGLARFLPPTRTQTSSIDVKGSIGYIAPEYGVGNEVSTI 216
H L N+LL + ++ DFGLAR + D + + ++APE + + V TI
Sbjct: 162 HRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPE-TIFDRVYTI 220
Query: 217 -GDVYSYGILLLELM 230
DV+S+G+LL E+
Sbjct: 221 QSDVWSFGVLLWEIF 235
>pdb|2R5T|A Chain A, Crystal Structure Of Inactive Serum And Glucocorticoid-
Regulated Kinase 1 In Complex With Amp-Pnp
pdb|3HDM|A Chain A, Crystal Structure Of Serum And Glucocorticoid-Regulated
Kinase 1 In Complex With Compound 1
pdb|3HDN|A Chain A, Crystal Structure Of Serum And Glucocorticoid-Regulated
Kinase 1 In Complex With Compound 2
Length = 373
Score = 40.4 bits (93), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 60/251 (23%), Positives = 101/251 (40%), Gaps = 36/251 (14%)
Query: 43 LISAGTFGFSHLRRQGAFKSFIA----ECKAL------------RNIRHRNLIKVLTACL 86
+I G+FG L R A + F A + KA+ RN+ +N+ L
Sbjct: 45 VIGKGSFGKVLLARHKAEEVFYAVKVLQKKAILKKKEEKHIMSERNVLLKNVKHPFLVGL 104
Query: 87 GVDYQGNDFKALVYEFMHNRSLKEWLYPISKEDETYKRPXXXXXXXXXXIAIDVASALNY 146
+Q D V ++++ L Y + +E + P A ++ASAL Y
Sbjct: 105 HFSFQTADKLYFVLDYINGGEL---FYHLQRE-RCFLEPRARF------YAAEIASALGY 154
Query: 147 LHHDCQPVTAHCVLKPSNVLLDDDMTARVGDFGLARFLPPTRTQTSSIDVKGSIGYIAPE 206
LH + LKP N+LLD + DFGL + + TS+ G+ Y+APE
Sbjct: 155 LHSLN---IVYRDLKPENILLDSQGHIVLTDFGLCKENIEHNSTTSTF--CGTPEYLAPE 209
Query: 207 YGVGNEVSTIGDVYSYGILLLELMIREKP-----SDIMFEGDMNLHKFAKMALSNHVKDI 261
D + G +L E++ P + M++ +N K ++N + +
Sbjct: 210 VLHKQPYDRTVDWWCLGAVLYEMLYGLPPFYSRNTAEMYDNILNKPLQLKPNITNSARHL 269
Query: 262 VDSILLNDDEK 272
++ +L D K
Sbjct: 270 LEGLLQKDRTK 280
>pdb|3U6J|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyrazolone Inhibitor
Length = 314
Score = 40.4 bits (93), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 25/75 (33%), Positives = 40/75 (53%), Gaps = 2/75 (2%)
Query: 157 HCVLKPSNVLLDDDMTARVGDFGLARFLPPTRTQTSSIDVKGSIGYIAPEYGVGNEVSTI 216
H L N+LL + ++ DFGLAR + D + + ++APE + + V TI
Sbjct: 162 HRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPE-TIFDRVYTI 220
Query: 217 -GDVYSYGILLLELM 230
DV+S+G+LL E+
Sbjct: 221 QSDVWSFGVLLWEIF 235
>pdb|2PZP|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K526e Mutation Responsible For
Crouzon Syndrome
pdb|2PZP|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K526e Mutation Responsible For
Crouzon Syndrome
Length = 324
Score = 40.4 bits (93), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 43/183 (23%), Positives = 80/183 (43%), Gaps = 33/183 (18%)
Query: 63 FIAECKALRNI-RHRNLIKVLTACLGVDYQGNDFKALVYEFMHNRSLKEWL--------- 112
++E + ++ I +H+N+I +L AC Q +V E+ +L+E+L
Sbjct: 87 LVSEMEMMKMIGKHKNIINLLGACT----QDGPLYVIV-EYASKGNLREYLRARRPPGME 141
Query: 113 --YPISK---EDETYKRPXXXXXXXXXXIAIDVASALNYL-HHDCQPVTAHCVLKPSNVL 166
Y I++ E T+K +A + YL C H L NVL
Sbjct: 142 YSYDINRVPEEQMTFK--------DLVSCTYQLARGMEYLASQKC----IHRDLAARNVL 189
Query: 167 LDDDMTARVGDFGLARFLPPTRTQTSSIDVKGSIGYIAPEYGVGNEVSTIGDVYSYGILL 226
+ ++ ++ DFGLAR + + + + + ++APE + DV+S+G+L+
Sbjct: 190 VTENNVMKIADFGLARDINNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLM 249
Query: 227 LEL 229
E+
Sbjct: 250 WEI 252
>pdb|3G0F|A Chain A, Kit Kinase Domain Mutant D816h In Complex With Sunitinib
pdb|3G0F|B Chain B, Kit Kinase Domain Mutant D816h In Complex With Sunitinib
Length = 336
Score = 40.4 bits (93), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 26/75 (34%), Positives = 37/75 (49%), Gaps = 2/75 (2%)
Query: 157 HCVLKPSNVLLDDDMTARVGDFGLARFLPPTRTQTSSIDVKGSIGYIAPEYGVGNEVSTI 216
H L N+LL ++ DFGLAR + + + + ++APE + N V T
Sbjct: 191 HRDLAARNILLTHGRITKICDFGLARHIKNDSNYVVKGNARLPVKWMAPE-SIFNCVYTF 249
Query: 217 -GDVYSYGILLLELM 230
DV+SYGI L EL
Sbjct: 250 ESDVWSYGIFLWELF 264
>pdb|2PZ5|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549t Mutation Responsible For
Pfeiffer Syndrome
pdb|2PZ5|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549t Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 40.4 bits (93), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 43/183 (23%), Positives = 80/183 (43%), Gaps = 33/183 (18%)
Query: 63 FIAECKALRNI-RHRNLIKVLTACLGVDYQGNDFKALVYEFMHNRSLKEWL--------- 112
++E + ++ I +H+N+I +L AC Q +V E+ +L+E+L
Sbjct: 87 LVSEMEMMKMIGKHKNIITLLGACT----QDGPLYVIV-EYASKGNLREYLRARRPPGME 141
Query: 113 --YPISK---EDETYKRPXXXXXXXXXXIAIDVASALNYL-HHDCQPVTAHCVLKPSNVL 166
Y I++ E T+K +A + YL C H L NVL
Sbjct: 142 YSYDINRVPEEQMTFK--------DLVSCTYQLARGMEYLASQKC----IHRDLAARNVL 189
Query: 167 LDDDMTARVGDFGLARFLPPTRTQTSSIDVKGSIGYIAPEYGVGNEVSTIGDVYSYGILL 226
+ ++ ++ DFGLAR + + + + + ++APE + DV+S+G+L+
Sbjct: 190 VTENNVMKIADFGLARDINNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLM 249
Query: 227 LEL 229
E+
Sbjct: 250 WEI 252
>pdb|2PWL|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549h Mutation Responsible For
Crouzon Syndrome.
pdb|2PWL|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549h Mutation Responsible For
Crouzon Syndrome
Length = 324
Score = 40.4 bits (93), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 43/183 (23%), Positives = 80/183 (43%), Gaps = 33/183 (18%)
Query: 63 FIAECKALRNI-RHRNLIKVLTACLGVDYQGNDFKALVYEFMHNRSLKEWL--------- 112
++E + ++ I +H+N+I +L AC Q +V E+ +L+E+L
Sbjct: 87 LVSEMEMMKMIGKHKNIIHLLGACT----QDGPLYVIV-EYASKGNLREYLRARRPPGME 141
Query: 113 --YPISK---EDETYKRPXXXXXXXXXXIAIDVASALNYL-HHDCQPVTAHCVLKPSNVL 166
Y I++ E T+K +A + YL C H L NVL
Sbjct: 142 YSYDINRVPEEQMTFK--------DLVSCTYQLARGMEYLASQKC----IHRDLAARNVL 189
Query: 167 LDDDMTARVGDFGLARFLPPTRTQTSSIDVKGSIGYIAPEYGVGNEVSTIGDVYSYGILL 226
+ ++ ++ DFGLAR + + + + + ++APE + DV+S+G+L+
Sbjct: 190 VTENNVMKIADFGLARDINNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLM 249
Query: 227 LEL 229
E+
Sbjct: 250 WEI 252
>pdb|1GJO|A Chain A, The Fgfr2 Tyrosine Kinase Domain
pdb|1OEC|A Chain A, Fgfr2 Kinase Domain
Length = 316
Score = 40.4 bits (93), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 43/183 (23%), Positives = 80/183 (43%), Gaps = 33/183 (18%)
Query: 63 FIAECKALRNI-RHRNLIKVLTACLGVDYQGNDFKALVYEFMHNRSLKEWL--------- 112
++E + ++ I +H+N+I +L AC Q +V E+ +L+E+L
Sbjct: 79 LVSEMEMMKMIGKHKNIINLLGACT----QDGPLYVIV-EYASKGNLREYLRARRPPGME 133
Query: 113 --YPISK---EDETYKRPXXXXXXXXXXIAIDVASALNYL-HHDCQPVTAHCVLKPSNVL 166
Y I++ E T+K +A + YL C H L NVL
Sbjct: 134 YSYDINRVPEEQMTFK--------DLVSCTYQLARGMEYLASQKC----IHRDLAARNVL 181
Query: 167 LDDDMTARVGDFGLARFLPPTRTQTSSIDVKGSIGYIAPEYGVGNEVSTIGDVYSYGILL 226
+ ++ ++ DFGLAR + + + + + ++APE + DV+S+G+L+
Sbjct: 182 VTENNVMKIADFGLARDINNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLM 241
Query: 227 LEL 229
E+
Sbjct: 242 WEI 244
>pdb|2XP2|A Chain A, Structure Of The Human Anaplastic Lymphoma Kinase In
Complex With Crizotinib (Pf-02341066)
Length = 327
Score = 40.4 bits (93), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 44/179 (24%), Positives = 74/179 (41%), Gaps = 30/179 (16%)
Query: 63 FIAECKALRNIRHRNLIKVLTACLGVDYQGNDFKALVYEFMHNRSLKEWLYPISKEDETY 122
F+ E + H+N+++ C+GV Q + ++ E M LK +L ET
Sbjct: 80 FLMEALIISKFNHQNIVR----CIGVSLQSLP-RFILLELMAGGDLKSFL------RETR 128
Query: 123 KRPXXXXXXXXX---XIAIDVASALNYLHHDCQPVTAHCVLKPSNVLL---DDDMTARVG 176
RP +A D+A YL + H + N LL A++G
Sbjct: 129 PRPSQPSSLAMLDLLHVARDIACGCQYLEEN---HFIHRDIAARNCLLTCPGPGRVAKIG 185
Query: 177 DFGLARFLPPTRTQTSSIDVKGS-----IGYIAPEYGVGNEVSTIGDVYSYGILLLELM 230
DFG+AR + +S KG + ++ PE + ++ D +S+G+LL E+
Sbjct: 186 DFGMARDI-----YRASYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIF 239
>pdb|2XB7|A Chain A, Structure Of Human Anaplastic Lymphoma Kinase In Complex
With Nvp- Tae684
pdb|2XBA|A Chain A, Structure Of Human Anaplastic Lymphoma Kinase In Complex
With Pha-E429
Length = 315
Score = 40.4 bits (93), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 44/179 (24%), Positives = 74/179 (41%), Gaps = 30/179 (16%)
Query: 63 FIAECKALRNIRHRNLIKVLTACLGVDYQGNDFKALVYEFMHNRSLKEWLYPISKEDETY 122
F+ E + H+N+++ C+GV Q + ++ E M LK +L ET
Sbjct: 72 FLMEALIISKFNHQNIVR----CIGVSLQSLP-RFILLELMAGGDLKSFL------RETR 120
Query: 123 KRPXXXXXXXXX---XIAIDVASALNYLHHDCQPVTAHCVLKPSNVLL---DDDMTARVG 176
RP +A D+A YL + H + N LL A++G
Sbjct: 121 PRPSQPSSLAMLDLLHVARDIACGCQYLEEN---HFIHRDIAARNCLLTCPGPGRVAKIG 177
Query: 177 DFGLARFLPPTRTQTSSIDVKGS-----IGYIAPEYGVGNEVSTIGDVYSYGILLLELM 230
DFG+AR + +S KG + ++ PE + ++ D +S+G+LL E+
Sbjct: 178 DFGMARDI-----YRASYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIF 231
>pdb|4FNZ|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Piperidine-Carboxamide Inhibitor 2
Length = 327
Score = 40.0 bits (92), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 44/179 (24%), Positives = 74/179 (41%), Gaps = 30/179 (16%)
Query: 63 FIAECKALRNIRHRNLIKVLTACLGVDYQGNDFKALVYEFMHNRSLKEWLYPISKEDETY 122
F+ E + H+N+++ C+GV Q + ++ E M LK +L ET
Sbjct: 81 FLMEALIISKFNHQNIVR----CIGVSLQSLP-RFILLELMAGGDLKSFL------RETR 129
Query: 123 KRPXXXXXXXXX---XIAIDVASALNYLHHDCQPVTAHCVLKPSNVLL---DDDMTARVG 176
RP +A D+A YL + H + N LL A++G
Sbjct: 130 PRPSQPSSLAMLDLLHVARDIACGCQYLEEN---HFIHRDIAARNCLLTCPGPGRVAKIG 186
Query: 177 DFGLARFLPPTRTQTSSIDVKGS-----IGYIAPEYGVGNEVSTIGDVYSYGILLLELM 230
DFG+AR + +S KG + ++ PE + ++ D +S+G+LL E+
Sbjct: 187 DFGMARDI-----YRASYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIF 240
>pdb|1MP8|A Chain A, Crystal Structure Of Focal Adhesion Kinase (Fak)
pdb|4I4F|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With An Allosteric Binding Pyrazolobenzothiazine
Compound
Length = 281
Score = 40.0 bits (92), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 25/95 (26%), Positives = 49/95 (51%), Gaps = 4/95 (4%)
Query: 137 AIDVASALNYLHHDCQPVTAHCVLKPSNVLLDDDMTARVGDFGLARFLPPTRTQTSSIDV 196
A +++AL YL H + NVL+ + ++GDFGL+R++ + T +
Sbjct: 122 AYQLSTALAYLESK---RFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDS-TYYKASKG 177
Query: 197 KGSIGYIAPEYGVGNEVSTIGDVYSYGILLLELMI 231
K I ++APE ++ DV+ +G+ + E+++
Sbjct: 178 KLPIKWMAPESINFRRFTSASDVWMFGVCMWEILM 212
>pdb|2JDO|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With
Isoquinoline-5- Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl) Amide
pdb|2JDR|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With The Inhibitor
A- 443654
pdb|2UW9|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With 4-(4-Chloro-
Phenyl)-4-(4-(1h-Pyrazol-4-Yl)-Phenyl)-Piperidine
pdb|2X39|A Chain A, Structure Of
4-Amino-N-(4-Chlorobenzyl)-1-(7h-Pyrrolo(2,3-D)
Pyrimidin-4-Yl)piperidine-4-Carboxamide Bound To Pkb
pdb|2XH5|A Chain A, Structure Of 4-(4-Tert-Butylbenzyl)-1-(7h-Pyrrolo(2,3-D)
Pyrimidin-4-Yl)piperidin-4-Amine Bound To Pkb
Length = 342
Score = 40.0 bits (92), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 42/172 (24%), Positives = 70/172 (40%), Gaps = 20/172 (11%)
Query: 64 IAECKALRNIRHRNLIKVLTACLGVDYQGNDFKALVYEFMHNRSLKEWLYPISKEDETYK 123
+ E + L+N RH LTA L +Q +D V E+ + L + +S+E
Sbjct: 58 VTESRVLQNTRH----PFLTA-LKYAFQTHDRLCFVMEYANGGEL---FFHLSRE----- 104
Query: 124 RPXXXXXXXXXXIAIDVASALNYLHHDCQPVTAHCVLKPSNVLLDDDMTARVGDFGLARF 183
++ SAL YLH + +K N++LD D ++ DFGL +
Sbjct: 105 --RVFTEERARFYGAEIVSALEYLH---SRDVVYRDIKLENLMLDKDGHIKITDFGLCK- 158
Query: 184 LPPTRTQTSSIDVKGSIGYIAPEYGVGNEVSTIGDVYSYGILLLELMIREKP 235
+ G+ Y+APE N+ D + G+++ E+M P
Sbjct: 159 -EGISDGATMKXFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLP 209
>pdb|1GZK|A Chain A, Molecular Mechanism For The Regulation Of Protein Kinase B
Akt By Hydrophobic Motif Phosphorylation
pdb|1GZO|A Chain A, Structure Of Protein Kinase B Unphosphorylated
Length = 315
Score = 40.0 bits (92), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 42/172 (24%), Positives = 70/172 (40%), Gaps = 20/172 (11%)
Query: 64 IAECKALRNIRHRNLIKVLTACLGVDYQGNDFKALVYEFMHNRSLKEWLYPISKEDETYK 123
+ E + L+N RH LTA L +Q +D V E+ + L + +S+E
Sbjct: 53 VTESRVLQNTRH----PFLTA-LKYAFQTHDRLCFVMEYANGGEL---FFHLSRE----- 99
Query: 124 RPXXXXXXXXXXIAIDVASALNYLHHDCQPVTAHCVLKPSNVLLDDDMTARVGDFGLARF 183
++ SAL YLH + +K N++LD D ++ DFGL +
Sbjct: 100 --RVFTEERARFYGAEIVSALEYLHSRD---VVYRDIKLENLMLDKDGHIKITDFGLCK- 153
Query: 184 LPPTRTQTSSIDVKGSIGYIAPEYGVGNEVSTIGDVYSYGILLLELMIREKP 235
+ G+ Y+APE N+ D + G+++ E+M P
Sbjct: 154 -EGISDGATMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLP 204
>pdb|3VID|A Chain A, Crystal Structure Of Human Vegfr2 Kinase Domain With
Compound A
Length = 356
Score = 40.0 bits (92), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 25/75 (33%), Positives = 40/75 (53%), Gaps = 2/75 (2%)
Query: 157 HCVLKPSNVLLDDDMTARVGDFGLARFLPPTRTQTSSIDVKGSIGYIAPEYGVGNEVSTI 216
H L N+LL + ++ DFGLAR + D + + ++APE + + V TI
Sbjct: 214 HRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPE-TIFDRVYTI 272
Query: 217 -GDVYSYGILLLELM 230
DV+S+G+LL E+
Sbjct: 273 QSDVWSFGVLLWEIF 287
>pdb|4EBW|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With Novel Allosteric Inhibitor
pdb|4EBV|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With Novel Allosteric Inhibitor
Length = 304
Score = 40.0 bits (92), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 25/95 (26%), Positives = 49/95 (51%), Gaps = 4/95 (4%)
Query: 137 AIDVASALNYLHHDCQPVTAHCVLKPSNVLLDDDMTARVGDFGLARFLPPTRTQTSSIDV 196
A +++AL YL H + NVL+ + ++GDFGL+R++ + T +
Sbjct: 145 AYQLSTALAYLESK---RFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDS-TYYKASKG 200
Query: 197 KGSIGYIAPEYGVGNEVSTIGDVYSYGILLLELMI 231
K I ++APE ++ DV+ +G+ + E+++
Sbjct: 201 KLPIKWMAPESINFRRFTSASDVWMFGVCMWEILM 235
>pdb|3CD3|A Chain A, Crystal Structure Of Phosphorylated Human Feline Sarcoma
Viral Oncogene Homologue (V-Fes) In Complex With
Staurosporine And A Consensus Peptide
Length = 377
Score = 40.0 bits (92), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 53/263 (20%), Positives = 92/263 (34%), Gaps = 48/263 (18%)
Query: 63 FIAECKALRNIRHRNLIKVLTACLGVDYQGNDFKALVYEFMHNRSLKEWLYPISKEDETY 122
F+ E + L+ H N+++++ C K +Y M ++L + E
Sbjct: 159 FLQEARILKQYSHPNIVRLIGVCTQ--------KQPIYIVMELVQGGDFLTFLRTEGARL 210
Query: 123 KRPXXXXXXXXXXIAIDVASALNYLHHDCQPVTAHCVLKPSNVLLDDDMTARVGDFGLAR 182
+ + D A+ + YL C H L N L+ + ++ DFG++R
Sbjct: 211 R------VKTLLQMVGDAAAGMEYLESKC---CIHRDLAARNCLVTEKNVLKISDFGMSR 261
Query: 183 FLPPTRTQTSSIDVKGSIGYIAPEYGVGNEVSTIGDVYSYGILLLELMIREKPSDIMFEG 242
S + + + APE S+ DV+S+GILL E
Sbjct: 262 EEADGVXAASGGLRQVPVKWTAPEALNYGRYSSESDVWSFGILLWE-------------- 307
Query: 243 DMNLHKFAKMALSNHVKDIVDSILLNDDEKLVVRGDQKQTQAKINIIRECVISMVRIGVA 302
+L LSN + V +G ++ C ++ R+
Sbjct: 308 TFSLGASPYPNLSNQ-----------QTREFVEKG------GRLPCPELCPDAVFRLMEQ 350
Query: 303 CSMESPQDRMKMTNVVHELQSIK 325
C P R + + ELQSI+
Sbjct: 351 CWAYEPGQRPSFSTIYQELQSIR 373
>pdb|3MBL|A Chain A, Crystal Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek 1) In Complex With Ligand And Mgadp
pdb|3PP1|A Chain A, Crystal Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek 1) In Complex With Ligand And Mgatp
Length = 328
Score = 40.0 bits (92), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 29/117 (24%), Positives = 53/117 (45%), Gaps = 6/117 (5%)
Query: 119 DETYKRPXXXXXXXXXXIAIDVASALNYLHHDCQPVTAHCVLKPSNVLLDDDMTARVGDF 178
D+ K+ ++I V L YL + H +KPSN+L++ ++ DF
Sbjct: 92 DQVLKKAGRIPEQILGKVSIAVIKGLTYLREKHK--IMHRDVKPSNILVNSRGEIKLCDF 149
Query: 179 GLARFLPPTRTQTSSIDVKGSIGYIAPEYGVGNEVSTIGDVYSYGILLLELMIREKP 235
G++ L + + G+ Y++PE G S D++S G+ L+E+ + P
Sbjct: 150 GVSGQLIDSMANS----FVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYP 202
>pdb|3DV3|A Chain A, Mek1 With Pf-04622664 Bound
Length = 322
Score = 40.0 bits (92), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 29/117 (24%), Positives = 53/117 (45%), Gaps = 6/117 (5%)
Query: 119 DETYKRPXXXXXXXXXXIAIDVASALNYLHHDCQPVTAHCVLKPSNVLLDDDMTARVGDF 178
D+ K+ ++I V L YL + H +KPSN+L++ ++ DF
Sbjct: 92 DQVLKKAGRIPEQILGKVSIAVIKGLTYLREKHK--IMHRDVKPSNILVNSRGEIKLCDF 149
Query: 179 GLARFLPPTRTQTSSIDVKGSIGYIAPEYGVGNEVSTIGDVYSYGILLLELMIREKP 235
G++ L + + G+ Y++PE G S D++S G+ L+E+ + P
Sbjct: 150 GVSGQLIDSMANS----FVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYP 202
>pdb|1GZN|A Chain A, Structure Of Pkb Kinase Domain
Length = 335
Score = 40.0 bits (92), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 42/172 (24%), Positives = 70/172 (40%), Gaps = 20/172 (11%)
Query: 64 IAECKALRNIRHRNLIKVLTACLGVDYQGNDFKALVYEFMHNRSLKEWLYPISKEDETYK 123
+ E + L+N RH LTA L +Q +D V E+ + L + +S+E
Sbjct: 53 VTESRVLQNTRH----PFLTA-LKYAFQTHDRLCFVMEYANGGEL---FFHLSRE----- 99
Query: 124 RPXXXXXXXXXXIAIDVASALNYLHHDCQPVTAHCVLKPSNVLLDDDMTARVGDFGLARF 183
++ SAL YLH + +K N++LD D ++ DFGL +
Sbjct: 100 --RVFTEERARFYGAEIVSALEYLHSRD---VVYRDIKLENLMLDKDGHIKITDFGLCK- 153
Query: 184 LPPTRTQTSSIDVKGSIGYIAPEYGVGNEVSTIGDVYSYGILLLELMIREKP 235
+ G+ Y+APE N+ D + G+++ E+M P
Sbjct: 154 -EGISDGATMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLP 204
>pdb|3VHE|A Chain A, Crystal Structure Of Human Vegfr2 Kinase Domain With A
Novel Pyrrolopyrimidine Inhibitor
Length = 359
Score = 40.0 bits (92), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 25/75 (33%), Positives = 40/75 (53%), Gaps = 2/75 (2%)
Query: 157 HCVLKPSNVLLDDDMTARVGDFGLARFLPPTRTQTSSIDVKGSIGYIAPEYGVGNEVSTI 216
H L N+LL + ++ DFGLAR + D + + ++APE + + V TI
Sbjct: 216 HRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPE-TIFDRVYTI 274
Query: 217 -GDVYSYGILLLELM 230
DV+S+G+LL E+
Sbjct: 275 QSDVWSFGVLLWEIF 289
>pdb|1Y6A|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
2-Anilino-5-Aryl-Oxazole Inhibitor
pdb|1Y6B|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
2-Anilino-5-Aryl-Oxazole Inhibitor
Length = 366
Score = 40.0 bits (92), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 25/75 (33%), Positives = 40/75 (53%), Gaps = 2/75 (2%)
Query: 157 HCVLKPSNVLLDDDMTARVGDFGLARFLPPTRTQTSSIDVKGSIGYIAPEYGVGNEVSTI 216
H L N+LL + ++ DFGLAR + D + + ++APE + + V TI
Sbjct: 221 HRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPE-TIFDRVYTI 279
Query: 217 -GDVYSYGILLLELM 230
DV+S+G+LL E+
Sbjct: 280 QSDVWSFGVLLWEIF 294
>pdb|1O6K|A Chain A, Structure Of Activated Form Of Pkb Kinase Domain S474d
With Gsk3 Peptide And Amp-Pnp
Length = 336
Score = 40.0 bits (92), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 42/172 (24%), Positives = 70/172 (40%), Gaps = 20/172 (11%)
Query: 64 IAECKALRNIRHRNLIKVLTACLGVDYQGNDFKALVYEFMHNRSLKEWLYPISKEDETYK 123
+ E + L+N RH LTA L +Q +D V E+ + L + +S+E
Sbjct: 53 VTESRVLQNTRH----PFLTA-LKYAFQTHDRLCFVMEYANGGEL---FFHLSRE----- 99
Query: 124 RPXXXXXXXXXXIAIDVASALNYLHHDCQPVTAHCVLKPSNVLLDDDMTARVGDFGLARF 183
++ SAL YLH + +K N++LD D ++ DFGL +
Sbjct: 100 --RVFTEERARFYGAEIVSALEYLHSRD---VVYRDIKLENLMLDKDGHIKITDFGLCK- 153
Query: 184 LPPTRTQTSSIDVKGSIGYIAPEYGVGNEVSTIGDVYSYGILLLELMIREKP 235
+ G+ Y+APE N+ D + G+++ E+M P
Sbjct: 154 -EGISDGATMKXFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLP 204
>pdb|2YHV|A Chain A, Structure Of L1196m Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 40.0 bits (92), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 44/179 (24%), Positives = 74/179 (41%), Gaps = 30/179 (16%)
Query: 63 FIAECKALRNIRHRNLIKVLTACLGVDYQGNDFKALVYEFMHNRSLKEWLYPISKEDETY 122
F+ E + H+N+++ C+GV Q + ++ E M LK +L ET
Sbjct: 95 FLMEALIISKFNHQNIVR----CIGVSLQSLP-RFILMELMAGGDLKSFL------RETR 143
Query: 123 KRPXXXXXXXXX---XIAIDVASALNYLHHDCQPVTAHCVLKPSNVLL---DDDMTARVG 176
RP +A D+A YL + H + N LL A++G
Sbjct: 144 PRPSQPSSLAMLDLLHVARDIACGCQYLEEN---HFIHRDIAARNCLLTCPGPGRVAKIG 200
Query: 177 DFGLARFLPPTRTQTSSIDVKGS-----IGYIAPEYGVGNEVSTIGDVYSYGILLLELM 230
DFG+AR + +S KG + ++ PE + ++ D +S+G+LL E+
Sbjct: 201 DFGMARDI-----YRASYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIF 254
>pdb|1SMH|A Chain A, Protein Kinase A Variant Complex With Completely Ordered
N- Terminal Helix
pdb|1XHA|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 40.0 bits (92), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 30/119 (25%), Positives = 56/119 (47%), Gaps = 18/119 (15%)
Query: 160 LKPSNVLLDDDMTARVGDFGLARFLPPTRTQTSSIDVKGSIGYIAPEYGVGNEVSTIGDV 219
LKP N+++D +V DFGLA+ R + + + G+ Y+APE + + D
Sbjct: 167 LKPENLMIDQQGYIQVTDFGLAK-----RVKGRTWXLCGTPEYLAPEIILSKGYNKAVDW 221
Query: 220 YSYGILLLELMIREKPSDIMFEGDMNLHKFAKMA---------LSNHVKDIVDSILLND 269
++ G+L+ E+ P F D + + K+ S+ +KD++ ++L D
Sbjct: 222 WALGVLIYEMAAGYPP----FFADQPIQIYEKIVSGKVRFPSHFSSDLKDLLRNLLQVD 276
>pdb|3ORN|A Chain A, Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In
Complex With Ch4987655 And Mgamp-Pnp
pdb|3OS3|A Chain A, Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In
Complex With Ch4858061 And Mgatp
Length = 307
Score = 40.0 bits (92), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 29/117 (24%), Positives = 53/117 (45%), Gaps = 6/117 (5%)
Query: 119 DETYKRPXXXXXXXXXXIAIDVASALNYLHHDCQPVTAHCVLKPSNVLLDDDMTARVGDF 178
D+ K+ ++I V L YL + H +KPSN+L++ ++ DF
Sbjct: 92 DQVLKKAGRIPEQILGKVSIAVIKGLTYLREKHK--IMHRDVKPSNILVNSRGEIKLCDF 149
Query: 179 GLARFLPPTRTQTSSIDVKGSIGYIAPEYGVGNEVSTIGDVYSYGILLLELMIREKP 235
G++ L + + G+ Y++PE G S D++S G+ L+E+ + P
Sbjct: 150 GVSGQL----IDSMANSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYP 202
>pdb|1Y8G|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Inactive Double Mutant With Selenomethionine
pdb|1Y8G|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Inactive Double Mutant With Selenomethionine
Length = 327
Score = 40.0 bits (92), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 32/100 (32%), Positives = 46/100 (46%), Gaps = 9/100 (9%)
Query: 140 VASALNYLHHDCQPVTAHCVLKPSNVLLDDDMTARVGDFGLARFLPPTRTQTSSIDVK-G 198
+ SA+ Y H Q H LK N+LLD D ++ DFG + T + +D G
Sbjct: 122 IVSAVQYCH---QKFIVHRDLKAENLLLDADXNIKIADFGFSNEF----TFGNKLDAFCG 174
Query: 199 SIGYIAPEYGVGNEVSTIG-DVYSYGILLLELMIREKPSD 237
+ Y APE G + DV+S G++L L+ P D
Sbjct: 175 APPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFD 214
>pdb|1MRV|A Chain A, Crystal Structure Of An Inactive Akt2 Kinase Domain
pdb|1MRY|A Chain A, Crystal Structure Of An Inactive Akt2 Kinase Domain
Length = 339
Score = 40.0 bits (92), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 42/172 (24%), Positives = 70/172 (40%), Gaps = 20/172 (11%)
Query: 64 IAECKALRNIRHRNLIKVLTACLGVDYQGNDFKALVYEFMHNRSLKEWLYPISKEDETYK 123
+ E + L+N RH LTA L +Q +D V E+ + L + +S+E
Sbjct: 56 VTESRVLQNTRH----PFLTA-LKYAFQTHDRLCFVMEYANGGEL---FFHLSRE----- 102
Query: 124 RPXXXXXXXXXXIAIDVASALNYLHHDCQPVTAHCVLKPSNVLLDDDMTARVGDFGLARF 183
++ SAL YLH + +K N++LD D ++ DFGL +
Sbjct: 103 --RVFTEERARFYGAEIVSALEYLHSRD---VVYRDIKLENLMLDKDGHIKITDFGLCK- 156
Query: 184 LPPTRTQTSSIDVKGSIGYIAPEYGVGNEVSTIGDVYSYGILLLELMIREKP 235
+ G+ Y+APE N+ D + G+++ E+M P
Sbjct: 157 -EGISDGATMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLP 207
>pdb|2P55|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3EQB|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
Length = 333
Score = 40.0 bits (92), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 29/117 (24%), Positives = 53/117 (45%), Gaps = 6/117 (5%)
Query: 119 DETYKRPXXXXXXXXXXIAIDVASALNYLHHDCQPVTAHCVLKPSNVLLDDDMTARVGDF 178
D+ K+ ++I V L YL + H +KPSN+L++ ++ DF
Sbjct: 92 DQVLKKAGRIPEQILGKVSIAVIKGLTYLREKHK--IMHRDVKPSNILVNSRGEIKLCDF 149
Query: 179 GLARFLPPTRTQTSSIDVKGSIGYIAPEYGVGNEVSTIGDVYSYGILLLELMIREKP 235
G++ L + + G+ Y++PE G S D++S G+ L+E+ + P
Sbjct: 150 GVSGQL----IDSMANSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYP 202
>pdb|3VHK|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Back Pocket Binder
Length = 368
Score = 40.0 bits (92), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 25/75 (33%), Positives = 40/75 (53%), Gaps = 2/75 (2%)
Query: 157 HCVLKPSNVLLDDDMTARVGDFGLARFLPPTRTQTSSIDVKGSIGYIAPEYGVGNEVSTI 216
H L N+LL + ++ DFGLAR + D + + ++APE + + V TI
Sbjct: 223 HRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPE-TIFDRVYTI 281
Query: 217 -GDVYSYGILLLELM 230
DV+S+G+LL E+
Sbjct: 282 QSDVWSFGVLLWEIF 296
>pdb|2Y4I|C Chain C, Ksr2-Mek1 Heterodimer
Length = 395
Score = 40.0 bits (92), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 29/117 (24%), Positives = 53/117 (45%), Gaps = 6/117 (5%)
Query: 119 DETYKRPXXXXXXXXXXIAIDVASALNYLHHDCQPVTAHCVLKPSNVLLDDDMTARVGDF 178
D+ K+ ++I V L YL + H +KPSN+L++ ++ DF
Sbjct: 154 DQVLKKAGRIPEQILGKVSIAVIKGLTYLREKHK--IMHRDVKPSNILVNSRGEIKLCDF 211
Query: 179 GLARFLPPTRTQTSSIDVKGSIGYIAPEYGVGNEVSTIGDVYSYGILLLELMIREKP 235
G++ L + + G+ Y++PE G S D++S G+ L+E+ + P
Sbjct: 212 GVSGQL----IDSMANSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYP 264
>pdb|3E87|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E87|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E88|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E88|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E8D|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E8D|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3D0E|A Chain A, Crystal Structure Of Human Akt2 In Complex With Gsk690693
pdb|3D0E|B Chain B, Crystal Structure Of Human Akt2 In Complex With Gsk690693
Length = 335
Score = 40.0 bits (92), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 42/172 (24%), Positives = 70/172 (40%), Gaps = 20/172 (11%)
Query: 64 IAECKALRNIRHRNLIKVLTACLGVDYQGNDFKALVYEFMHNRSLKEWLYPISKEDETYK 123
+ E + L+N RH LTA L +Q +D V E+ + L + +S+E
Sbjct: 53 VTESRVLQNTRH----PFLTA-LKYAFQTHDRLCFVMEYANGGEL---FFHLSRE----- 99
Query: 124 RPXXXXXXXXXXIAIDVASALNYLHHDCQPVTAHCVLKPSNVLLDDDMTARVGDFGLARF 183
++ SAL YLH + +K N++LD D ++ DFGL +
Sbjct: 100 --RVFTEERARFYGAEIVSALEYLHSRD---VVYRDIKLENLMLDKDGHIKITDFGLCK- 153
Query: 184 LPPTRTQTSSIDVKGSIGYIAPEYGVGNEVSTIGDVYSYGILLLELMIREKP 235
+ G+ Y+APE N+ D + G+++ E+M P
Sbjct: 154 -EGISDGATMKXFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLP 204
>pdb|2UZT|A Chain A, Pka Structures Of Akt, Indazole-Pyridine Inhibitors
pdb|2UZU|E Chain E, Pka Structures Of Indazole-Pyridine Series Of Akt
Inhibitors
pdb|2UZV|A Chain A, Pka Structures Of Indazole-pyridine Series Of Akt
Inhibitors
pdb|2UZW|E Chain E, Pka Structures Of Indazole-Pyridine Series Of Akt
Inhibitors
Length = 336
Score = 40.0 bits (92), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 30/119 (25%), Positives = 55/119 (46%), Gaps = 18/119 (15%)
Query: 160 LKPSNVLLDDDMTARVGDFGLARFLPPTRTQTSSIDVKGSIGYIAPEYGVGNEVSTIGDV 219
LKP N+L+D +V DFG A+ R + + + G+ Y+APE + + D
Sbjct: 153 LKPENLLIDQQGYIQVTDFGFAK-----RVKGRTWTLCGTPEYLAPEIILSKGYNKAVDW 207
Query: 220 YSYGILLLELMIREKPSDIMFEGDMNLHKFAKMA---------LSNHVKDIVDSILLND 269
++ G+L+ E+ P F D + + K+ S+ +KD++ ++L D
Sbjct: 208 WALGVLIYEMAAGYPP----FFADQPIQIYEKIVSGKVRFPSHFSSDLKDLLRNLLQVD 262
>pdb|1S9J|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3DY7|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3E8N|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) Complexed With A Potent Inhibitor
Rdea119 And Mgatp
pdb|3V01|A Chain A, Discovery Of Novel Allosteric Mek Inhibitors Possessing
Classical And Non-Classical Bidentate Ser212
Interactions.
pdb|3V04|A Chain A, Discovery Of Novel Allosteric Mek Inhibitors Possessing
Classical And Non-Classical Bidentate Ser212
Interactions
Length = 341
Score = 40.0 bits (92), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 29/117 (24%), Positives = 53/117 (45%), Gaps = 6/117 (5%)
Query: 119 DETYKRPXXXXXXXXXXIAIDVASALNYLHHDCQPVTAHCVLKPSNVLLDDDMTARVGDF 178
D+ K+ ++I V L YL + H +KPSN+L++ ++ DF
Sbjct: 92 DQVLKKAGRIPEQILGKVSIAVIKGLTYLREKHK--IMHRDVKPSNILVNSRGEIKLCDF 149
Query: 179 GLARFLPPTRTQTSSIDVKGSIGYIAPEYGVGNEVSTIGDVYSYGILLLELMIREKP 235
G++ L + + G+ Y++PE G S D++S G+ L+E+ + P
Sbjct: 150 GVSGQL----IDSMANSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYP 202
>pdb|4DFX|E Chain E, Crystal Structure Of Myristoylated K7c Catalytic Subunit
Of Camp- Dependent Protein Kinase In Complex With Sp20
And Amp-Pnp
pdb|4DFZ|E Chain E, Crystal Structure Of Myristoylated K7c Catalytic Subunit
Of Camp- Dependent Protein Kinase In Complex With Sp20
Length = 350
Score = 40.0 bits (92), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 30/119 (25%), Positives = 55/119 (46%), Gaps = 18/119 (15%)
Query: 160 LKPSNVLLDDDMTARVGDFGLARFLPPTRTQTSSIDVKGSIGYIAPEYGVGNEVSTIGDV 219
LKP N+L+D +V DFG A+ R + + + G+ Y+APE + + D
Sbjct: 167 LKPENLLIDQQGYIQVTDFGFAK-----RVKGRTWXLCGTPEYLAPEIILSKGYNKAVDW 221
Query: 220 YSYGILLLELMIREKPSDIMFEGDMNLHKFAKMA---------LSNHVKDIVDSILLND 269
++ G+L+ E+ P F D + + K+ S+ +KD++ ++L D
Sbjct: 222 WALGVLIYEMAAGYPP----FFADQPIQIYEKIVSGKVRFPSHFSSDLKDLLRNLLQVD 276
>pdb|1Q8W|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase In
Complex With Rho-Kinase Inhibitor Fasudil (Ha-1077)
pdb|1XH4|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|3BWJ|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Lead Compound Arc-1034
pdb|3KKV|A Chain A, Structure Of Pka With A Protein Kinase B-Selective
Inhibitor
Length = 350
Score = 40.0 bits (92), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 30/119 (25%), Positives = 55/119 (46%), Gaps = 18/119 (15%)
Query: 160 LKPSNVLLDDDMTARVGDFGLARFLPPTRTQTSSIDVKGSIGYIAPEYGVGNEVSTIGDV 219
LKP N+L+D +V DFG A+ R + + + G+ Y+APE + + D
Sbjct: 167 LKPENLLIDQQGYIQVTDFGFAK-----RVKGRTWXLCGTPEYLAPEIILSKGYNKAVDW 221
Query: 220 YSYGILLLELMIREKPSDIMFEGDMNLHKFAKMA---------LSNHVKDIVDSILLND 269
++ G+L+ E+ P F D + + K+ S+ +KD++ ++L D
Sbjct: 222 WALGVLIYEMAAGYPP----FFADQPIQIYEKIVSGKVRFPSHFSSDLKDLLRNLLQVD 276
>pdb|4AE9|A Chain A, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit C Alpha 2
pdb|4AE9|B Chain B, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit C Alpha 2
Length = 343
Score = 40.0 bits (92), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 30/119 (25%), Positives = 55/119 (46%), Gaps = 18/119 (15%)
Query: 160 LKPSNVLLDDDMTARVGDFGLARFLPPTRTQTSSIDVKGSIGYIAPEYGVGNEVSTIGDV 219
LKP N+L+D +V DFG A+ R + + + G+ Y+APE + + D
Sbjct: 160 LKPENLLIDQQGYIQVTDFGFAK-----RVKGRTWXLCGTPEYLAPEIILSKGYNKAVDW 214
Query: 220 YSYGILLLELMIREKPSDIMFEGDMNLHKFAKMA---------LSNHVKDIVDSILLND 269
++ G+L+ E+ P F D + + K+ S+ +KD++ ++L D
Sbjct: 215 WALGVLIYEMAAGYPP----FFADQPIQIYEKIVSGKVRFPSHFSSDLKDLLRNLLQVD 269
>pdb|1CTP|E Chain E, Structure Of The Mammalian Catalytic Subunit Of
Camp-Dependent Protein Kinase And An Inhibitor Peptide
Displays An Open Conformation
Length = 350
Score = 40.0 bits (92), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 30/119 (25%), Positives = 55/119 (46%), Gaps = 18/119 (15%)
Query: 160 LKPSNVLLDDDMTARVGDFGLARFLPPTRTQTSSIDVKGSIGYIAPEYGVGNEVSTIGDV 219
LKP N+L+D +V DFG A+ R + + + G+ Y+APE + + D
Sbjct: 167 LKPENLLIDQQGYIQVTDFGFAK-----RVKGRTWXLCGTPEYLAPEIILSKGYNKAVDW 221
Query: 220 YSYGILLLELMIREKPSDIMFEGDMNLHKFAKMA---------LSNHVKDIVDSILLND 269
++ G+L+ E+ P F D + + K+ S+ +KD++ ++L D
Sbjct: 222 WALGVLIYEMAAGYPP----FFADQPIQIYEKIVSGKVRFPSHFSSDLKDLLRNLLQVD 276
>pdb|3AGM|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-670
pdb|3L9L|A Chain A, Crystal Structure Of Pka With Compound 36
pdb|3L9L|B Chain B, Crystal Structure Of Pka With Compound 36
pdb|3OOG|A Chain A, Human Camp-Dependent Protein Kinase In Complex With A
Small Fragment
pdb|3OVV|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3OWP|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3OXT|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3P0M|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3POO|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
Length = 351
Score = 40.0 bits (92), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 30/119 (25%), Positives = 55/119 (46%), Gaps = 18/119 (15%)
Query: 160 LKPSNVLLDDDMTARVGDFGLARFLPPTRTQTSSIDVKGSIGYIAPEYGVGNEVSTIGDV 219
LKP N+L+D +V DFG A+ R + + + G+ Y+APE + + D
Sbjct: 168 LKPENLLIDQQGYIQVTDFGFAK-----RVKGRTWXLCGTPEYLAPEIILSKGYNKAVDW 222
Query: 220 YSYGILLLELMIREKPSDIMFEGDMNLHKFAKMA---------LSNHVKDIVDSILLND 269
++ G+L+ E+ P F D + + K+ S+ +KD++ ++L D
Sbjct: 223 WALGVLIYEMAAGYPP----FFADQPIQIYEKIVSGKVRFPSHFSSDLKDLLRNLLQVD 277
>pdb|1STC|E Chain E, Camp-Dependent Protein Kinase, Alpha-Catalytic Subunit In
Complex With Staurosporine
pdb|1Q8T|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase
(Pka) In Complex With Rho-Kinase Inhibitor Y-27632
pdb|1Q8U|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase In
Complex With Rho-Kinase Inhibitor H-1152p
pdb|1SVE|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 1
pdb|1SVG|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 4
pdb|1VEB|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 5
pdb|3E8C|A Chain A, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|B Chain B, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|C Chain C, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|D Chain D, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|E Chain E, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|F Chain F, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8E|A Chain A, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|B Chain B, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|E Chain E, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|I Chain I, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|L Chain L, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|P Chain P, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
Length = 350
Score = 40.0 bits (92), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 30/119 (25%), Positives = 55/119 (46%), Gaps = 18/119 (15%)
Query: 160 LKPSNVLLDDDMTARVGDFGLARFLPPTRTQTSSIDVKGSIGYIAPEYGVGNEVSTIGDV 219
LKP N+L+D +V DFG A+ R + + + G+ Y+APE + + D
Sbjct: 167 LKPENLLIDQQGYIQVTDFGFAK-----RVKGRTWXLCGTPEYLAPEIILSKGYNKAVDW 221
Query: 220 YSYGILLLELMIREKPSDIMFEGDMNLHKFAKMA---------LSNHVKDIVDSILLND 269
++ G+L+ E+ P F D + + K+ S+ +KD++ ++L D
Sbjct: 222 WALGVLIYEMAAGYPP----FFADQPIQIYEKIVSGKVRFPSHFSSDLKDLLRNLLQVD 276
>pdb|3PVB|A Chain A, Crystal Structure Of (73-244)ria:c Holoenzyme Of
Camp-Dependent Protein Kinase
Length = 345
Score = 40.0 bits (92), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 30/119 (25%), Positives = 55/119 (46%), Gaps = 18/119 (15%)
Query: 160 LKPSNVLLDDDMTARVGDFGLARFLPPTRTQTSSIDVKGSIGYIAPEYGVGNEVSTIGDV 219
LKP N+L+D +V DFG A+ R + + + G+ Y+APE + + D
Sbjct: 162 LKPENLLIDQQGYIQVTDFGFAK-----RVKGRTWXLCGTPEYLAPEIILSKGYNKAVDW 216
Query: 220 YSYGILLLELMIREKPSDIMFEGDMNLHKFAKMA---------LSNHVKDIVDSILLND 269
++ G+L+ E+ P F D + + K+ S+ +KD++ ++L D
Sbjct: 217 WALGVLIYEMAAGYPP----FFADQPIQIYEKIVSGKVRFPSHFSSDLKDLLRNLLQVD 271
>pdb|3AGL|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1039
pdb|3AGL|B Chain B, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1039
pdb|3VQH|A Chain A, Bromine Sad Partially Resolves Multiple Binding Modes For
Pka Inhibitor H-89
Length = 351
Score = 40.0 bits (92), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 30/119 (25%), Positives = 55/119 (46%), Gaps = 18/119 (15%)
Query: 160 LKPSNVLLDDDMTARVGDFGLARFLPPTRTQTSSIDVKGSIGYIAPEYGVGNEVSTIGDV 219
LKP N+L+D +V DFG A+ R + + + G+ Y+APE + + D
Sbjct: 168 LKPENLLIDQQGYIQVTDFGFAK-----RVKGRTWXLCGTPEYLAPEIILSKGYNKAVDW 222
Query: 220 YSYGILLLELMIREKPSDIMFEGDMNLHKFAKMA---------LSNHVKDIVDSILLND 269
++ G+L+ E+ P F D + + K+ S+ +KD++ ++L D
Sbjct: 223 WALGVLIYEMAAGYPP----FFADQPIQIYEKIVSGKVRFPSHFSSDLKDLLRNLLQVD 277
>pdb|2QUR|A Chain A, Crystal Structure Of F327aK285P MUTANT OF CAMP-Dependent
Protein Kinase
Length = 350
Score = 40.0 bits (92), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 30/119 (25%), Positives = 55/119 (46%), Gaps = 18/119 (15%)
Query: 160 LKPSNVLLDDDMTARVGDFGLARFLPPTRTQTSSIDVKGSIGYIAPEYGVGNEVSTIGDV 219
LKP N+L+D +V DFG A+ R + + + G+ Y+APE + + D
Sbjct: 167 LKPENLLIDQQGYIQVTDFGFAK-----RVKGRTWXLCGTPEYLAPEIILSKGYNKAVDW 221
Query: 220 YSYGILLLELMIREKPSDIMFEGDMNLHKFAKMA---------LSNHVKDIVDSILLND 269
++ G+L+ E+ P F D + + K+ S+ +KD++ ++L D
Sbjct: 222 WALGVLIYEMAAGYPP----FFADQPIQIYEKIVSGKVRFPSHFSSDLKDLLRNLLQVD 276
>pdb|3NX8|A Chain A, Human Camp Dependent Protein Kinase In Complex With Phenol
Length = 351
Score = 39.7 bits (91), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 30/119 (25%), Positives = 55/119 (46%), Gaps = 18/119 (15%)
Query: 160 LKPSNVLLDDDMTARVGDFGLARFLPPTRTQTSSIDVKGSIGYIAPEYGVGNEVSTIGDV 219
LKP N+L+D +V DFG A+ R + + + G+ Y+APE + + D
Sbjct: 168 LKPENLLIDQQGYIQVTDFGFAK-----RVKGRTWXLCGTPEYLAPEIILSKGYNKAVDW 222
Query: 220 YSYGILLLELMIREKPSDIMFEGDMNLHKFAKMA---------LSNHVKDIVDSILLND 269
++ G+L+ E+ P F D + + K+ S+ +KD++ ++L D
Sbjct: 223 WALGVLIYEMAAGYPP----FFADQPIQIYEKIVSGKVRFPSHFSSDLKDLLRNLLQVD 277
>pdb|3OZ6|A Chain A, Crystal Structure Of Mapk From Cryptosporidium Parvum,
Cgd2_1960
pdb|3OZ6|B Chain B, Crystal Structure Of Mapk From Cryptosporidium Parvum,
Cgd2_1960
Length = 388
Score = 39.7 bits (91), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 29/94 (30%), Positives = 45/94 (47%), Gaps = 20/94 (21%)
Query: 157 HCVLKPSNVLLDDDMTARVGDFGLARFLPPTRTQTSSI-------------------DVK 197
H +KPSN+LL+ + +V DFGL+R R T++I D
Sbjct: 132 HRDMKPSNILLNAECHVKVADFGLSRSFVNIRRVTNNIPLSINENTENFDDDQPILTDYV 191
Query: 198 GSIGYIAPEYGVGNEVSTIG-DVYSYGILLLELM 230
+ Y APE +G+ T G D++S G +L E++
Sbjct: 192 ATRWYRAPEILLGSTKYTKGIDMWSLGCILGEIL 225
>pdb|2C1A|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
Isoquinoline-5-Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl)amide
pdb|2C1B|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
(4r,2s)-5'-(4-(4-Chlorobenzyloxy)pyrrolidin-2-
Ylmethanesulfonyl)isoquinoline
pdb|2VO7|A Chain A, Structure Of Pka Complexed With 4-(4-Chlorobenzyl)-1-(7h-
Pyrrolo(2,3-D)pyrimidin-4-Yl)piperidin-4-Ylamine
pdb|3AG9|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1012
pdb|3AG9|B Chain B, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1012
Length = 351
Score = 39.7 bits (91), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 30/119 (25%), Positives = 55/119 (46%), Gaps = 18/119 (15%)
Query: 160 LKPSNVLLDDDMTARVGDFGLARFLPPTRTQTSSIDVKGSIGYIAPEYGVGNEVSTIGDV 219
LKP N+L+D +V DFG A+ R + + + G+ Y+APE + + D
Sbjct: 168 LKPENLLIDQQGYIQVTDFGFAK-----RVKGRTWXLCGTPEYLAPEIILSKGYNKAVDW 222
Query: 220 YSYGILLLELMIREKPSDIMFEGDMNLHKFAKMA---------LSNHVKDIVDSILLND 269
++ G+L+ E+ P F D + + K+ S+ +KD++ ++L D
Sbjct: 223 WALGVLIYEMAAGYPP----FFADQPIQIYEKIVSGKVRFPSHFSSDLKDLLRNLLQVD 277
>pdb|2YJS|A Chain A, Structure Of C1156y Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 39.7 bits (91), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 44/179 (24%), Positives = 74/179 (41%), Gaps = 30/179 (16%)
Query: 63 FIAECKALRNIRHRNLIKVLTACLGVDYQGNDFKALVYEFMHNRSLKEWLYPISKEDETY 122
F+ E + H+N+++ C+GV Q + ++ E M LK +L ET
Sbjct: 95 FLMEALIISKFNHQNIVR----CIGVSLQSLP-RFILLELMAGGDLKSFL------RETR 143
Query: 123 KRPXXXXXXXXX---XIAIDVASALNYLHHDCQPVTAHCVLKPSNVLL---DDDMTARVG 176
RP +A D+A YL + H + N LL A++G
Sbjct: 144 PRPSQPSSLAMLDLLHVARDIACGCQYLEEN---HFIHRDIAARNCLLTCPGPGRVAKIG 200
Query: 177 DFGLARFLPPTRTQTSSIDVKGS-----IGYIAPEYGVGNEVSTIGDVYSYGILLLELM 230
DFG+AR + +S KG + ++ PE + ++ D +S+G+LL E+
Sbjct: 201 DFGMARDI-----YRASYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIF 254
>pdb|2F7E|E Chain E, Pka Complexed With
(S)-2-(1h-Indol-3-Yl)-1-(5-Isoquinolin-6-
Yl-Pyridin-3-Yloxymethyl-Etylamine
pdb|2F7X|E Chain E, Protein Kinase A Bound To
(s)-2-(1h-indol-3-yl)-1-[5-((e)-2-
Pyridin-4-yl-vinyl)-pyridin-3-yloxymethyl]-ethylamine
pdb|2F7Z|E Chain E, Protein Kinase A Bound To
(R)-1-(1h-Indol-3-Ylmethyl)-2-(2-
Pyridin-4-Yl-[1,7]naphtyridin-5-Yloxy)-Ehylamine
pdb|2OH0|E Chain E, Crystal Structure Of Protein Kinase A In Complex With
Pyridine-Pyrazolopyridine Based Inhibitors
pdb|2OJF|E Chain E, Crystal Structure Of Protein Kinase A In Complex With
Pyridine-Pyrazolopyridine Based Inhibitors
Length = 351
Score = 39.7 bits (91), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 30/119 (25%), Positives = 55/119 (46%), Gaps = 18/119 (15%)
Query: 160 LKPSNVLLDDDMTARVGDFGLARFLPPTRTQTSSIDVKGSIGYIAPEYGVGNEVSTIGDV 219
LKP N+L+D +V DFG A+ R + + + G+ Y+APE + + D
Sbjct: 168 LKPENLLIDQQGYIQVTDFGFAK-----RVKGRTWTLCGTPEYLAPEIILSKGYNKAVDW 222
Query: 220 YSYGILLLELMIREKPSDIMFEGDMNLHKFAKMA---------LSNHVKDIVDSILLND 269
++ G+L+ E+ P F D + + K+ S+ +KD++ ++L D
Sbjct: 223 WALGVLIYEMAAGYPP----FFADQPIQIYEKIVSGKVRFPSHFSSDLKDLLRNLLQVD 277
>pdb|4AE6|A Chain A, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit Calpha 2
pdb|4AE6|B Chain B, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit Calpha 2
Length = 343
Score = 39.7 bits (91), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 30/119 (25%), Positives = 55/119 (46%), Gaps = 18/119 (15%)
Query: 160 LKPSNVLLDDDMTARVGDFGLARFLPPTRTQTSSIDVKGSIGYIAPEYGVGNEVSTIGDV 219
LKP N+L+D +V DFG A+ R + + + G+ Y+APE + + D
Sbjct: 160 LKPENLLIDQQGYIQVTDFGFAK-----RVKGRTWXLCGTPEYLAPEIILSKGYNKAVDW 214
Query: 220 YSYGILLLELMIREKPSDIMFEGDMNLHKFAKMA---------LSNHVKDIVDSILLND 269
++ G+L+ E+ P F D + + K+ S+ +KD++ ++L D
Sbjct: 215 WALGVLIYEMAAGYPP----FFADQPIQIYEKIVSGKVRFPSHFSSDLKDLLRNLLQVD 269
>pdb|1APM|E Chain E, 2.0 Angstrom Refined Crystal Structure Of The Catalytic
Subunit Of Camp-Dependent Protein Kinase Complexed With
A Peptide Inhibitor And Detergent
Length = 350
Score = 39.7 bits (91), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 30/119 (25%), Positives = 55/119 (46%), Gaps = 18/119 (15%)
Query: 160 LKPSNVLLDDDMTARVGDFGLARFLPPTRTQTSSIDVKGSIGYIAPEYGVGNEVSTIGDV 219
LKP N+L+D +V DFG A+ R + + + G+ Y+APE + + D
Sbjct: 167 LKPENLLIDQQGYIQVTDFGFAK-----RVKGRTWXLCGTPEYLAPEIILSKGYNKAVDW 221
Query: 220 YSYGILLLELMIREKPSDIMFEGDMNLHKFAKMA---------LSNHVKDIVDSILLND 269
++ G+L+ E+ P F D + + K+ S+ +KD++ ++L D
Sbjct: 222 WALGVLIYEMAAGYPP----FFADQPIQIYEKIVSGKVRFPSHFSSDLKDLLRNLLQVD 276
>pdb|2JDS|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
A- 443654
Length = 351
Score = 39.7 bits (91), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 30/119 (25%), Positives = 55/119 (46%), Gaps = 18/119 (15%)
Query: 160 LKPSNVLLDDDMTARVGDFGLARFLPPTRTQTSSIDVKGSIGYIAPEYGVGNEVSTIGDV 219
LKP N+L+D +V DFG A+ R + + + G+ Y+APE + + D
Sbjct: 168 LKPENLLIDQQGYIQVTDFGFAK-----RVKGRTWXLCGTPEYLAPEIILSKGYNKAVDW 222
Query: 220 YSYGILLLELMIREKPSDIMFEGDMNLHKFAKMA---------LSNHVKDIVDSILLND 269
++ G+L+ E+ P F D + + K+ S+ +KD++ ++L D
Sbjct: 223 WALGVLIYEMAAGYPP----FFADQPIQIYEKIVSGKVRFPSHFSSDLKDLLRNLLQVD 277
>pdb|1XH7|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 39.7 bits (91), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 30/119 (25%), Positives = 55/119 (46%), Gaps = 18/119 (15%)
Query: 160 LKPSNVLLDDDMTARVGDFGLARFLPPTRTQTSSIDVKGSIGYIAPEYGVGNEVSTIGDV 219
LKP N+L+D +V DFG A+ R + + + G+ Y+APE + + D
Sbjct: 167 LKPENLLIDQQGYIQVTDFGFAK-----RVKGRTWXLCGTPEYLAPEIILSKGYNKAVDW 221
Query: 220 YSYGILLLELMIREKPSDIMFEGDMNLHKFAKMA---------LSNHVKDIVDSILLND 269
++ G+L+ E+ P F D + + K+ S+ +KD++ ++L D
Sbjct: 222 WALGVLIYEMAAGYPP----FFADQPIQIYEKIVSGKVRFPSHFSSDLKDLLRNLLQVD 276
>pdb|1SVH|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 8
pdb|1XH5|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|1XH6|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|1XH8|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|2GFC|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
Length = 350
Score = 39.7 bits (91), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 30/119 (25%), Positives = 55/119 (46%), Gaps = 18/119 (15%)
Query: 160 LKPSNVLLDDDMTARVGDFGLARFLPPTRTQTSSIDVKGSIGYIAPEYGVGNEVSTIGDV 219
LKP N+L+D +V DFG A+ R + + + G+ Y+APE + + D
Sbjct: 167 LKPENLLIDQQGYIQVTDFGFAK-----RVKGRTWXLCGTPEYLAPEIILSKGYNKAVDW 221
Query: 220 YSYGILLLELMIREKPSDIMFEGDMNLHKFAKMA---------LSNHVKDIVDSILLND 269
++ G+L+ E+ P F D + + K+ S+ +KD++ ++L D
Sbjct: 222 WALGVLIYEMAAGYPP----FFADQPIQIYEKIVSGKVRFPSHFSSDLKDLLRNLLQVD 276
>pdb|1CDK|A Chain A, Camp-Dependent Protein Kinase Catalytic Subunit
(E.C.2.7.1.37) (Protein Kinase A) Complexed With Protein
Kinase Inhibitor Peptide Fragment 5-24 (Pki(5-24)
Isoelectric Variant Ca) And Mn2+ Adenylyl
Imidodiphosphate (Mnamp-Pnp) At Ph 5.6 And 7c And 4c
pdb|1CDK|B Chain B, Camp-Dependent Protein Kinase Catalytic Subunit
(E.C.2.7.1.37) (Protein Kinase A) Complexed With Protein
Kinase Inhibitor Peptide Fragment 5-24 (Pki(5-24)
Isoelectric Variant Ca) And Mn2+ Adenylyl
Imidodiphosphate (Mnamp-Pnp) At Ph 5.6 And 7c And 4c
Length = 350
Score = 39.7 bits (91), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 30/119 (25%), Positives = 55/119 (46%), Gaps = 18/119 (15%)
Query: 160 LKPSNVLLDDDMTARVGDFGLARFLPPTRTQTSSIDVKGSIGYIAPEYGVGNEVSTIGDV 219
LKP N+L+D +V DFG A+ R + + + G+ Y+APE + + D
Sbjct: 167 LKPENLLIDQQGYIQVTDFGFAK-----RVKGRTWXLCGTPEYLAPEIILSKGYNKAVDW 221
Query: 220 YSYGILLLELMIREKPSDIMFEGDMNLHKFAKMA---------LSNHVKDIVDSILLND 269
++ G+L+ E+ P F D + + K+ S+ +KD++ ++L D
Sbjct: 222 WALGVLIYEMAAGYPP----FFADQPIQIYEKIVSGKVRFPSHFSSDLKDLLRNLLQVD 276
>pdb|1L3R|E Chain E, Crystal Structure Of A Transition State Mimic Of The
Catalytic Subunit Of Camp-Dependent Protein Kinase
pdb|3TNP|C Chain C, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
pdb|3TNP|F Chain F, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
pdb|3TNQ|B Chain B, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
Length = 350
Score = 39.7 bits (91), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 30/119 (25%), Positives = 55/119 (46%), Gaps = 18/119 (15%)
Query: 160 LKPSNVLLDDDMTARVGDFGLARFLPPTRTQTSSIDVKGSIGYIAPEYGVGNEVSTIGDV 219
LKP N+L+D +V DFG A+ R + + + G+ Y+APE + + D
Sbjct: 167 LKPENLLIDQQGYIQVTDFGFAK-----RVKGRTWXLCGTPEYLAPEIILSKGYNKAVDW 221
Query: 220 YSYGILLLELMIREKPSDIMFEGDMNLHKFAKMA---------LSNHVKDIVDSILLND 269
++ G+L+ E+ P F D + + K+ S+ +KD++ ++L D
Sbjct: 222 WALGVLIYEMAAGYPP----FFADQPIQIYEKIVSGKVRFPSHFSSDLKDLLRNLLQVD 276
>pdb|2QCS|A Chain A, A Complex Structure Between The Catalytic And Regulatory
Subunit Of Protein Kinase A That Represents The
Inhibited State
pdb|2CPK|E Chain E, Crystal Structure Of The Catalytic Subunit Of Cyclic
Adenosine Monophosphate-Dependent Protein Kinase
pdb|4DG0|E Chain E, Crystal Structure Of Myristoylated Wt Catalytic Subunit Of
Camp- Dependent Protein Kinase In Complex With Sp20 And
Amp-Pnp
pdb|4DG2|E Chain E, Crystal Structure Of Myristoylated Wt Catalytic Subunit Of
Camp- Dependent Protein Kinase In Complex With Sp20
pdb|4DH1|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With Low Mg2+, Atp And Ip20
pdb|4DH3|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Atp And Ip20
pdb|4DH5|A Chain A, Room Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Adp,
Phosphate, And Ip20
pdb|4DH7|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Amp-pnp And
Ip20'
pdb|4DH8|A Chain A, Room Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Amp-pnp And
Ip20
Length = 350
Score = 39.7 bits (91), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 30/119 (25%), Positives = 55/119 (46%), Gaps = 18/119 (15%)
Query: 160 LKPSNVLLDDDMTARVGDFGLARFLPPTRTQTSSIDVKGSIGYIAPEYGVGNEVSTIGDV 219
LKP N+L+D +V DFG A+ R + + + G+ Y+APE + + D
Sbjct: 167 LKPENLLIDQQGYIQVTDFGFAK-----RVKGRTWXLCGTPEYLAPEIILSKGYNKAVDW 221
Query: 220 YSYGILLLELMIREKPSDIMFEGDMNLHKFAKMA---------LSNHVKDIVDSILLND 269
++ G+L+ E+ P F D + + K+ S+ +KD++ ++L D
Sbjct: 222 WALGVLIYEMAAGYPP----FFADQPIQIYEKIVSGKVRFPSHFSSDLKDLLRNLLQVD 276
>pdb|1BKX|A Chain A, A Binary Complex Of The Catalytic Subunit Of
Camp-Dependent Protein Kinase And Adenosine Further
Defines Conformational Flexibility
pdb|1BX6|A Chain A, Crystal Structure Of The Potent Natural Product Inhibitor
Balanol In Complex With The Catalytic Subunit Of Camp-
Dependent Protein Kinase
Length = 350
Score = 39.7 bits (91), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 30/119 (25%), Positives = 55/119 (46%), Gaps = 18/119 (15%)
Query: 160 LKPSNVLLDDDMTARVGDFGLARFLPPTRTQTSSIDVKGSIGYIAPEYGVGNEVSTIGDV 219
LKP N+L+D +V DFG A+ R + + + G+ Y+APE + + D
Sbjct: 167 LKPENLLIDQQGYIQVTDFGFAK-----RVKGRTWXLCGTPEYLAPEIILSKGYNKAVDW 221
Query: 220 YSYGILLLELMIREKPSDIMFEGDMNLHKFAKMA---------LSNHVKDIVDSILLND 269
++ G+L+ E+ P F D + + K+ S+ +KD++ ++L D
Sbjct: 222 WALGVLIYEMAAGYPP----FFADQPIQIYEKIVSGKVRFPSHFSSDLKDLLRNLLQVD 276
>pdb|3V3V|A Chain A, Structural And Functional Analysis Of Quercetagetin, A
Natural Jnk1 Inhibitor
Length = 379
Score = 39.7 bits (91), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 27/96 (28%), Positives = 49/96 (51%), Gaps = 7/96 (7%)
Query: 157 HCVLKPSNVLLDDDMTARVGDFGLARFLPPTRTQTSSIDVKGSIGYIAPEYGVGNEVSTI 216
H LKPSN+++ D T ++ DFGLAR + T + + Y APE +G
Sbjct: 149 HRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMTPEVVTR---YYRAPEVILGMGYKEN 205
Query: 217 GDVYSYGILLLELMIREKPSDIMFEGDMNLHKFAKM 252
D++S G ++ E++ ++F G ++ ++ K+
Sbjct: 206 VDIWSVGCIMGEMI----KGGVLFPGTDHIDQWNKV 237
>pdb|3BKB|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (V- Fes)
pdb|3CBL|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (v- Fes) In Complex With Staurosporine And A
Consensus Peptide
pdb|4E93|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (V- Fes)in Complex With Tae684
Length = 377
Score = 39.7 bits (91), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 53/263 (20%), Positives = 92/263 (34%), Gaps = 48/263 (18%)
Query: 63 FIAECKALRNIRHRNLIKVLTACLGVDYQGNDFKALVYEFMHNRSLKEWLYPISKEDETY 122
F+ E + L+ H N+++++ C K +Y M ++L + E
Sbjct: 159 FLQEARILKQYSHPNIVRLIGVCTQ--------KQPIYIVMELVQGGDFLTFLRTEGARL 210
Query: 123 KRPXXXXXXXXXXIAIDVASALNYLHHDCQPVTAHCVLKPSNVLLDDDMTARVGDFGLAR 182
+ + D A+ + YL C H L N L+ + ++ DFG++R
Sbjct: 211 R------VKTLLQMVGDAAAGMEYLESKC---CIHRDLAARNCLVTEKNVLKISDFGMSR 261
Query: 183 FLPPTRTQTSSIDVKGSIGYIAPEYGVGNEVSTIGDVYSYGILLLELMIREKPSDIMFEG 242
S + + + APE S+ DV+S+GILL E
Sbjct: 262 EEADGVYAASGGLRQVPVKWTAPEALNYGRYSSESDVWSFGILLWE-------------- 307
Query: 243 DMNLHKFAKMALSNHVKDIVDSILLNDDEKLVVRGDQKQTQAKINIIRECVISMVRIGVA 302
+L LSN + V +G ++ C ++ R+
Sbjct: 308 TFSLGASPYPNLSNQ-----------QTREFVEKG------GRLPCPELCPDAVFRLMEQ 350
Query: 303 CSMESPQDRMKMTNVVHELQSIK 325
C P R + + ELQSI+
Sbjct: 351 CWAYEPGQRPSFSTIYQELQSIR 373
>pdb|3IW4|A Chain A, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
pdb|3IW4|B Chain B, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
pdb|3IW4|C Chain C, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
Length = 360
Score = 39.7 bits (91), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 23/78 (29%), Positives = 39/78 (50%), Gaps = 2/78 (2%)
Query: 160 LKPSNVLLDDDMTARVGDFGLARFLPPTRTQTSSIDVKGSIGYIAPEYGVGNEVSTIGDV 219
LK NV+LD + ++ DFG+ + ++ + G+ YIAPE D
Sbjct: 146 LKLDNVMLDSEGHIKIADFGMCK--EHMMDGVTTREFCGTPDYIAPEIIAYQPYGKSVDW 203
Query: 220 YSYGILLLELMIREKPSD 237
++YG+LL E++ + P D
Sbjct: 204 WAYGVLLYEMLAGQPPFD 221
>pdb|1CMK|E Chain E, Crystal Structures Of The Myristylated Catalytic Subunit
Of Camp- Dependent Protein Kinase Reveal Open And Closed
Conformations
Length = 350
Score = 39.7 bits (91), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 30/119 (25%), Positives = 55/119 (46%), Gaps = 18/119 (15%)
Query: 160 LKPSNVLLDDDMTARVGDFGLARFLPPTRTQTSSIDVKGSIGYIAPEYGVGNEVSTIGDV 219
LKP N+L+D +V DFG A+ R + + + G+ Y+APE + + D
Sbjct: 167 LKPENLLIDQQGYIQVTDFGFAK-----RVKGRTWXLCGTPEYLAPEIILSKGYNKAVDW 221
Query: 220 YSYGILLLELMIREKPSDIMFEGDMNLHKFAKMA---------LSNHVKDIVDSILLND 269
++ G+L+ E+ P F D + + K+ S+ +KD++ ++L D
Sbjct: 222 WALGVLIYEMAAGYPP----FFADQPIQIYEKIVSGKVRFPSHFSSDLKDLLRNLLQVD 276
>pdb|2ERZ|E Chain E, Crystal Structure Of C-amp Dependent Kinase (pka) Bound To
Hydroxyfasudil
Length = 351
Score = 39.7 bits (91), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 30/119 (25%), Positives = 55/119 (46%), Gaps = 18/119 (15%)
Query: 160 LKPSNVLLDDDMTARVGDFGLARFLPPTRTQTSSIDVKGSIGYIAPEYGVGNEVSTIGDV 219
LKP N+L+D +V DFG A+ R + + + G+ Y+APE + + D
Sbjct: 168 LKPENLLIDQQGYIQVTDFGFAK-----RVKGRTWXLCGTPEYLAPEIILSKGYNKAVDW 222
Query: 220 YSYGILLLELMIREKPSDIMFEGDMNLHKFAKMA---------LSNHVKDIVDSILLND 269
++ G+L+ E+ P F D + + K+ S+ +KD++ ++L D
Sbjct: 223 WALGVLIYEMAAGYPP----FFADQPIQIYEKIVSGKVRFPSHFSSDLKDLLRNLLQVD 277
>pdb|1FMO|E Chain E, Crystal Structure Of A Polyhistidine-Tagged Recombinant
Catalytic Subunit Of Camp-Dependent Protein Kinase
Complexed With The Peptide Inhibitor Pki(5-24) And
Adenosine
pdb|1JLU|E Chain E, Crystal Structure Of The Catalytic Subunit Of
Camp-dependent Protein Kinase Complexed With A
Phosphorylated Substrate Peptide And Detergent
pdb|1RE8|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 2
pdb|1REJ|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 1
pdb|1REK|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 8
pdb|2QVS|E Chain E, Crystal Structure Of Type Iia Holoenzyme Of Camp-Dependent
Protein Kinase
pdb|3FJQ|E Chain E, Crystal Structure Of Camp-Dependent Protein Kinase
Catalytic Subunit Alpha In Complex With Peptide
Inhibitor Pki Alpha (6-25)
pdb|3IDB|A Chain A, Crystal Structure Of (108-268)riib:c Holoenzyme Of Camp-
Dependent Protein Kinase
pdb|3IDC|A Chain A, Crystal Structure Of (102-265)riib:c Holoenzyme Of Camp-
Dependent Protein Kinase
pdb|3O7L|D Chain D, Crystal Structure Of Phospholamban (1-19):pka
C-Subunit:amp-Pnp:mg2+ Complex
pdb|3OW3|A Chain A, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|1ATP|E Chain E, 2.2 Angstrom Refined Crystal Structure Of The Catalytic
Subunit Of Camp-Dependent Protein Kinase Complexed With
Mnatp And A Peptide Inhibitor
pdb|4DIN|A Chain A, Novel Localization And Quaternary Structure Of The Pka Ri
Beta Holoenzyme
Length = 350
Score = 39.7 bits (91), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 30/119 (25%), Positives = 55/119 (46%), Gaps = 18/119 (15%)
Query: 160 LKPSNVLLDDDMTARVGDFGLARFLPPTRTQTSSIDVKGSIGYIAPEYGVGNEVSTIGDV 219
LKP N+L+D +V DFG A+ R + + + G+ Y+APE + + D
Sbjct: 167 LKPENLLIDQQGYIQVTDFGFAK-----RVKGRTWXLCGTPEYLAPEIILSKGYNKAVDW 221
Query: 220 YSYGILLLELMIREKPSDIMFEGDMNLHKFAKMA---------LSNHVKDIVDSILLND 269
++ G+L+ E+ P F D + + K+ S+ +KD++ ++L D
Sbjct: 222 WALGVLIYEMAAGYPP----FFADQPIQIYEKIVSGKVRFPSHFSSDLKDLLRNLLQVD 276
>pdb|3QAL|E Chain E, Crystal Structure Of Arg280ala Mutant Of Catalytic Subunit
Of Camp- Dependent Protein Kinase
Length = 350
Score = 39.7 bits (91), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 30/119 (25%), Positives = 55/119 (46%), Gaps = 18/119 (15%)
Query: 160 LKPSNVLLDDDMTARVGDFGLARFLPPTRTQTSSIDVKGSIGYIAPEYGVGNEVSTIGDV 219
LKP N+L+D +V DFG A+ R + + + G+ Y+APE + + D
Sbjct: 167 LKPENLLIDQQGYIQVTDFGFAK-----RVKGRTWXLCGTPEYLAPEIILSKGYNKAVDW 221
Query: 220 YSYGILLLELMIREKPSDIMFEGDMNLHKFAKMA---------LSNHVKDIVDSILLND 269
++ G+L+ E+ P F D + + K+ S+ +KD++ ++L D
Sbjct: 222 WALGVLIYEMAAGYPP----FFADQPIQIYEKIVSGKVRFPSHFSSDLKDLLRNLLQVD 276
>pdb|1YDT|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H89 Protein
Kinase Inhibitor N-[2-
(4-Bromocinnamylamino)ethyl]-5-Isoquinoline
pdb|1YDR|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H7 Protein
Kinase Inhibitor 1-(5-
Isoquinolinesulfonyl)-2-Methylpiperazine
pdb|1YDS|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H8 Protein
Kinase Inhibitor [n-(2-Methylamino)ethyl]-5-
Isoquinolinesulfonamide
Length = 350
Score = 39.7 bits (91), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 30/119 (25%), Positives = 55/119 (46%), Gaps = 18/119 (15%)
Query: 160 LKPSNVLLDDDMTARVGDFGLARFLPPTRTQTSSIDVKGSIGYIAPEYGVGNEVSTIGDV 219
LKP N+L+D +V DFG A+ R + + + G+ Y+APE + + D
Sbjct: 167 LKPENLLIDQQGYIQVTDFGFAK-----RVKGRTWXLCGTPEYLAPEIILSKGYNKAVDW 221
Query: 220 YSYGILLLELMIREKPSDIMFEGDMNLHKFAKMA---------LSNHVKDIVDSILLND 269
++ G+L+ E+ P F D + + K+ S+ +KD++ ++L D
Sbjct: 222 WALGVLIYEMAAGYPP----FFADQPIQIYEKIVSGKVRFPSHFSSDLKDLLRNLLQVD 276
>pdb|3DND|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
pdb|3DNE|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
Length = 350
Score = 39.7 bits (91), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 30/119 (25%), Positives = 55/119 (46%), Gaps = 18/119 (15%)
Query: 160 LKPSNVLLDDDMTARVGDFGLARFLPPTRTQTSSIDVKGSIGYIAPEYGVGNEVSTIGDV 219
LKP N+L+D +V DFG A+ R + + + G+ Y+APE + + D
Sbjct: 167 LKPENLLIDQQGYIQVTDFGFAK-----RVKGRTWXLCGTPEYLAPEIILSKGYNKAVDW 221
Query: 220 YSYGILLLELMIREKPSDIMFEGDMNLHKFAKMA---------LSNHVKDIVDSILLND 269
++ G+L+ E+ P F D + + K+ S+ +KD++ ++L D
Sbjct: 222 WALGVLIYEMAAGYPP----FFADQPIQIYEKIVSGKVRFPSHFSSDLKDLLRNLLQVD 276
>pdb|2GCD|A Chain A, Tao2 Kinase Domain-Staurosporine Structure
pdb|2GCD|B Chain B, Tao2 Kinase Domain-Staurosporine Structure
Length = 309
Score = 39.7 bits (91), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 50/205 (24%), Positives = 83/205 (40%), Gaps = 29/205 (14%)
Query: 35 SRNMLEENLISAGTFGFSHLRRQGAFKSFIAECKALRNIRHRNLIKVLTACLGVDYQGND 94
+R++ +++ +S + ++ I E + L+ +RH N I+ C Y
Sbjct: 34 ARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPNTIQ-YRGC----YLREH 88
Query: 95 FKALVYEFMHNRSLKEWLYPISKEDETYKRPXXXXXXXXXXIAIDVASALNYLH-HDCQP 153
LV E+ L S E +K+P + L YLH H+
Sbjct: 89 TAWLVMEYC--------LGSASDLLEVHKKPLQEVEIAA--VTHGALQGLAYLHSHN--- 135
Query: 154 VTAHCVLKPSNVLLDDDMTARVGDFGLARFLPPTRTQTSSIDVKGSIGYIAPEYGVG-NE 212
H +K N+LL + ++GDFG A + P G+ ++APE + +E
Sbjct: 136 -MIHRDVKAGNILLSEPGLVKLGDFGSASIMAPANX------FVGTPYWMAPEVILAMDE 188
Query: 213 VSTIG--DVYSYGILLLELMIREKP 235
G DV+S GI +EL R+ P
Sbjct: 189 GQYDGKVDVWSLGITCIELAERKPP 213
>pdb|4DG3|E Chain E, Crystal Structure Of R336a Mutant Of Camp-dependent
Protein Kinase With Unphosphorylated Turn Motif
Length = 371
Score = 39.7 bits (91), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 30/119 (25%), Positives = 55/119 (46%), Gaps = 18/119 (15%)
Query: 160 LKPSNVLLDDDMTARVGDFGLARFLPPTRTQTSSIDVKGSIGYIAPEYGVGNEVSTIGDV 219
LKP N+L+D +V DFG A+ R + + + G+ Y+APE + + D
Sbjct: 188 LKPENLLIDQQGYIQVTDFGFAK-----RVKGRTWXLCGTPEYLAPEIILSKGYNKAVDW 242
Query: 220 YSYGILLLELMIREKPSDIMFEGDMNLHKFAKMA---------LSNHVKDIVDSILLND 269
++ G+L+ E+ P F D + + K+ S+ +KD++ ++L D
Sbjct: 243 WALGVLIYEMAAGYPP----FFADQPIQIYEKIVSGKVRFPSHFSSDLKDLLRNLLQVD 297
>pdb|3MVJ|A Chain A, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
pdb|3MVJ|B Chain B, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
pdb|3MVJ|E Chain E, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
Length = 371
Score = 39.7 bits (91), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 30/119 (25%), Positives = 55/119 (46%), Gaps = 18/119 (15%)
Query: 160 LKPSNVLLDDDMTARVGDFGLARFLPPTRTQTSSIDVKGSIGYIAPEYGVGNEVSTIGDV 219
LKP N+L+D +V DFG A+ R + + + G+ Y+APE + + D
Sbjct: 188 LKPENLLIDQQGYIQVTDFGFAK-----RVKGRTWXLCGTPEYLAPEIILSKGYNKAVDW 242
Query: 220 YSYGILLLELMIREKPSDIMFEGDMNLHKFAKMA---------LSNHVKDIVDSILLND 269
++ G+L+ E+ P F D + + K+ S+ +KD++ ++L D
Sbjct: 243 WALGVLIYEMAAGYPP----FFADQPIQIYEKIVSGKVRFPSHFSSDLKDLLRNLLQVD 297
>pdb|3L9M|A Chain A, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 18
pdb|3L9M|B Chain B, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 18
pdb|3L9N|A Chain A, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 27
Length = 351
Score = 39.7 bits (91), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 29/119 (24%), Positives = 55/119 (46%), Gaps = 18/119 (15%)
Query: 160 LKPSNVLLDDDMTARVGDFGLARFLPPTRTQTSSIDVKGSIGYIAPEYGVGNEVSTIGDV 219
LKP N+++D +V DFG A+ R + + + G+ Y+APE + + D
Sbjct: 168 LKPENLMIDQQGYIKVTDFGFAK-----RVKGRTWXLCGTPEYLAPEIILSKGYNKAVDW 222
Query: 220 YSYGILLLELMIREKPSDIMFEGDMNLHKFAKMA---------LSNHVKDIVDSILLND 269
++ G+L+ E+ P F D + + K+ S+ +KD++ ++L D
Sbjct: 223 WALGVLIYEMAAGYPP----FFADQPIQIYEKIVSGKVRFPSHFSSDLKDLLRNLLQVD 277
>pdb|2VO0|A Chain A, Structure Of Pka-Pkb Chimera Complexed With C-(4-(4-
Chlorophenyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Yl)methylamine
Length = 351
Score = 39.7 bits (91), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 29/119 (24%), Positives = 55/119 (46%), Gaps = 18/119 (15%)
Query: 160 LKPSNVLLDDDMTARVGDFGLARFLPPTRTQTSSIDVKGSIGYIAPEYGVGNEVSTIGDV 219
LKP N+++D +V DFG A+ R + + + G+ Y+APE + + D
Sbjct: 168 LKPENLMIDQQGYIKVTDFGFAK-----RVKGRTWXLCGTPEYLAPEIILSKGYNKAVDW 222
Query: 220 YSYGILLLELMIREKPSDIMFEGDMNLHKFAKMA---------LSNHVKDIVDSILLND 269
++ G+L+ E+ P F D + + K+ S+ +KD++ ++L D
Sbjct: 223 WALGVLIYEMAAGYPP----FFADQPIQIYEKIVSGKVRFPSHFSSDLKDLLRNLLQVD 277
>pdb|2UVY|A Chain A, Structure Of Pka-pkb Chimera Complexed With Methyl-(4-(9h-
Purin-6-yl)-benzyl)-amine
pdb|2UVZ|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
C-Phenyl-C-(4-( 9h-Purin-6-Yl)-Phenyl)-Methylamine
pdb|2UW0|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 6-(4-(4-(4-
Chloro-Phenyl)-Piperidin-4-Yl)-Phenyl)-9h-Purine
pdb|2UW3|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 5-Methyl-4-
Phenyl-1h-Pyrazole
pdb|2UW5|A Chain A, Structure Of Pka-Pkb Chimera Complexed With (R)-2-(4-
Chloro-Phenyl)-2-(4-1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW6|A Chain A, Structure Of Pka-Pkb Chimera Complexed With (S)-2-(4-
Chloro-Phenyl)-2-(4-1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW8|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 2-(4-Chloro-
Phenyl)-2-Phenyl-Ethylamine
pdb|2VNW|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
(1-(9h-Purin-6- Yl)piperidin-4-Yl)methanamine
pdb|2VNY|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
(1-(9h-Purin-6- Yl)piperidin-4-Yl)amine
pdb|2VO3|A Chain A, Structure Of Pka-Pkb Chimera Complexed With C-(4-(4-
Chlorophenyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Yl)methylamine
pdb|2VO6|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 4-(4-
Chlorobenzyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Ylamine
Length = 351
Score = 39.7 bits (91), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 29/119 (24%), Positives = 55/119 (46%), Gaps = 18/119 (15%)
Query: 160 LKPSNVLLDDDMTARVGDFGLARFLPPTRTQTSSIDVKGSIGYIAPEYGVGNEVSTIGDV 219
LKP N+++D +V DFG A+ R + + + G+ Y+APE + + D
Sbjct: 168 LKPENLMIDQQGYIKVTDFGFAK-----RVKGRTWXLCGTPEYLAPEIILSKGYNKAVDW 222
Query: 220 YSYGILLLELMIREKPSDIMFEGDMNLHKFAKMA---------LSNHVKDIVDSILLND 269
++ G+L+ E+ P F D + + K+ S+ +KD++ ++L D
Sbjct: 223 WALGVLIYEMAAGYPP----FFADQPIQIYEKIVSGKVRFPSHFSSDLKDLLRNLLQVD 277
>pdb|1SZM|A Chain A, Dual Binding Mode Of Bisindolylmaleimide 2 To Protein
Kinase A (Pka)
pdb|1SZM|B Chain B, Dual Binding Mode Of Bisindolylmaleimide 2 To Protein
Kinase A (Pka)
Length = 350
Score = 39.7 bits (91), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 29/119 (24%), Positives = 55/119 (46%), Gaps = 18/119 (15%)
Query: 160 LKPSNVLLDDDMTARVGDFGLARFLPPTRTQTSSIDVKGSIGYIAPEYGVGNEVSTIGDV 219
LKP N+++D +V DFG A+ R + + + G+ Y+APE + + D
Sbjct: 167 LKPENLMIDQQGYIKVTDFGFAK-----RVKGRTWXLCGTPEYLAPEIILSKGYNKAVDW 221
Query: 220 YSYGILLLELMIREKPSDIMFEGDMNLHKFAKMA---------LSNHVKDIVDSILLND 269
++ G+L+ E+ P F D + + K+ S+ +KD++ ++L D
Sbjct: 222 WALGVLIYEMAAGYPP----FFADQPIQIYEKIVSGKVRFPSHFSSDLKDLLRNLLQVD 276
>pdb|3O7L|B Chain B, Crystal Structure Of Phospholamban (1-19):pka
C-Subunit:amp-Pnp:mg2+ Complex
Length = 350
Score = 39.7 bits (91), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 29/119 (24%), Positives = 55/119 (46%), Gaps = 18/119 (15%)
Query: 160 LKPSNVLLDDDMTARVGDFGLARFLPPTRTQTSSIDVKGSIGYIAPEYGVGNEVSTIGDV 219
LKP N+++D +V DFG A+ R + + + G+ Y+APE + + D
Sbjct: 167 LKPENLIIDQQGYIQVTDFGFAK-----RVKGRTWXLCGTPEYLAPEIIISKGYNKAVDW 221
Query: 220 YSYGILLLELMIREKPSDIMFEGDMNLHKFAKMA---------LSNHVKDIVDSILLND 269
++ G+L+ E+ P F D + + K+ S+ +KD++ ++L D
Sbjct: 222 WALGVLIYEMAAGYPP----FFADQPIQIYEKIVSGKVRFPSHFSSDLKDLLRNLLQVD 276
>pdb|2JDT|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
Isoquinoline-5- Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl) Amide
pdb|2JDV|A Chain A, Structure Of Pka-Pkb Chimera Complexed With A-443654
pdb|2UVX|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 7-Azaindole
pdb|2UW4|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
2-(4-(5-Methyl- 1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW7|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 4-(4-Chloro-
Phenyl)-4-(4-(1h-Pyrazol-4-Yl)-Phenyl)-Piperidine
pdb|4AXA|A Chain A, Structure Of Pka-pkb Chimera Complexed With
(1s)-2-amino-1-(
4-chlorophenyl)-1-(4-(1h-pyrazol-4-yl)phenyl)ethan-1-ol
Length = 351
Score = 39.3 bits (90), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 29/119 (24%), Positives = 55/119 (46%), Gaps = 18/119 (15%)
Query: 160 LKPSNVLLDDDMTARVGDFGLARFLPPTRTQTSSIDVKGSIGYIAPEYGVGNEVSTIGDV 219
LKP N+++D +V DFG A+ R + + + G+ Y+APE + + D
Sbjct: 168 LKPENLMIDQQGYIKVTDFGFAK-----RVKGRTWXLCGTPEYLAPEIILSKGYNKAVDW 222
Query: 220 YSYGILLLELMIREKPSDIMFEGDMNLHKFAKMA---------LSNHVKDIVDSILLND 269
++ G+L+ E+ P F D + + K+ S+ +KD++ ++L D
Sbjct: 223 WALGVLIYEMAAGYPP----FFADQPIQIYEKIVSGKVRFPSHFSSDLKDLLRNLLQVD 277
>pdb|1Q61|A Chain A, Pka Triple Mutant Model Of Pkb
Length = 350
Score = 39.3 bits (90), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 29/119 (24%), Positives = 55/119 (46%), Gaps = 18/119 (15%)
Query: 160 LKPSNVLLDDDMTARVGDFGLARFLPPTRTQTSSIDVKGSIGYIAPEYGVGNEVSTIGDV 219
LKP N+++D +V DFG A+ R + + + G+ Y+APE + + D
Sbjct: 167 LKPENLMIDQQGYIKVTDFGFAK-----RVKGRTWXLCGTPEYLAPEIILSKGYNKAVDW 221
Query: 220 YSYGILLLELMIREKPSDIMFEGDMNLHKFAKMA---------LSNHVKDIVDSILLND 269
++ G+L+ E+ P F D + + K+ S+ +KD++ ++L D
Sbjct: 222 WALGVLIYEMAAGYPP----FFADQPIQIYEKIVSGKVRFPSHFSSDLKDLLRNLLQVD 276
>pdb|4APC|A Chain A, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
pdb|4APC|B Chain B, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
pdb|4B9D|A Chain A, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
With Inhibitor.
pdb|4B9D|B Chain B, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
With Inhibitor
Length = 350
Score = 39.3 bits (90), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 23/73 (31%), Positives = 37/73 (50%), Gaps = 2/73 (2%)
Query: 157 HCVLKPSNVLLDDDMTARVGDFGLARFLPPTRTQTSSIDVKGSIGYIAPEYGVGNEVSTI 216
H +K N+ L D T ++GDFG+AR L T + G+ Y++PE +
Sbjct: 148 HRDIKSQNIFLTKDGTVQLGDFGIARVLNSTVELARA--CIGTPYYLSPEICENKPYNNK 205
Query: 217 GDVYSYGILLLEL 229
D+++ G +L EL
Sbjct: 206 SDIWALGCVLYEL 218
>pdb|3VUH|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M3 In Map
Kinase Jnk1
Length = 370
Score = 39.3 bits (90), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 27/96 (28%), Positives = 49/96 (51%), Gaps = 7/96 (7%)
Query: 157 HCVLKPSNVLLDDDMTARVGDFGLARFLPPTRTQTSSIDVKGSIGYIAPEYGVGNEVSTI 216
H LKPSN+++ D T ++ DFGLAR + T + + Y APE +G
Sbjct: 149 HRDLKPSNIVVKSDATLKILDFGLARTAGTSFMMTPYVVTR---YYRAPEVILGMGYKEN 205
Query: 217 GDVYSYGILLLELMIREKPSDIMFEGDMNLHKFAKM 252
D++S G ++ E++ ++F G ++ ++ K+
Sbjct: 206 VDIWSVGCIMGEMI----KGGVLFPGTDHIDQWNKV 237
>pdb|3VUD|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M1 In Map
Kinase Jnk1
Length = 370
Score = 39.3 bits (90), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 27/96 (28%), Positives = 49/96 (51%), Gaps = 7/96 (7%)
Query: 157 HCVLKPSNVLLDDDMTARVGDFGLARFLPPTRTQTSSIDVKGSIGYIAPEYGVGNEVSTI 216
H LKPSN+++ D T ++ DFGLAR + T + + Y APE +G
Sbjct: 149 HRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMTPYVVTR---YYRAPEVILGMGYKEN 205
Query: 217 GDVYSYGILLLELMIREKPSDIMFEGDMNLHKFAKM 252
D++S G ++ E++ ++F G ++ ++ K+
Sbjct: 206 VDIWSVGCIMGEMI----KGGVLFPGTDHIDQWNKV 237
>pdb|1PKG|A Chain A, Structure Of A C-kit Kinase Product Complex
pdb|1PKG|B Chain B, Structure Of A C-kit Kinase Product Complex
Length = 329
Score = 39.3 bits (90), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 26/75 (34%), Positives = 37/75 (49%), Gaps = 2/75 (2%)
Query: 157 HCVLKPSNVLLDDDMTARVGDFGLARFLPPTRTQTSSIDVKGSIGYIAPEYGVGNEVSTI 216
H L N+LL ++ DFGLAR + + + + ++APE + N V T
Sbjct: 184 HRDLAARNILLTHGRITKICDFGLARDIKNDSNYVVKGNARLPVKWMAPE-SIFNCVYTF 242
Query: 217 -GDVYSYGILLLELM 230
DV+SYGI L EL
Sbjct: 243 ESDVWSYGIFLWELF 257
>pdb|1UKH|A Chain A, Structural Basis For The Selective Inhibition Of Jnk1 By
The Scaffolding Protein Jip1 And Sp600125
pdb|1UKI|A Chain A, Structural Basis For The Selective Inhibition Of Jnk1 By
The Scaffolding Protein Jip1 And Sp600125
Length = 369
Score = 39.3 bits (90), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 27/96 (28%), Positives = 49/96 (51%), Gaps = 7/96 (7%)
Query: 157 HCVLKPSNVLLDDDMTARVGDFGLARFLPPTRTQTSSIDVKGSIGYIAPEYGVGNEVSTI 216
H LKPSN+++ D T ++ DFGLAR + T + + Y APE +G
Sbjct: 149 HRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMTPYVVTR---YYRAPEVILGMGYKEN 205
Query: 217 GDVYSYGILLLELMIREKPSDIMFEGDMNLHKFAKM 252
D++S G ++ E++ ++F G ++ ++ K+
Sbjct: 206 VDIWSVGCIMGEMI----KGGVLFPGTDHIDQWNKV 237
>pdb|3LCT|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
pdb|3LCS|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
Length = 344
Score = 39.3 bits (90), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 41/174 (23%), Positives = 70/174 (40%), Gaps = 20/174 (11%)
Query: 63 FIAECKALRNIRHRNLIKVLTACLGVDYQGNDFKALVYEFMHNRSLKEWLYPISKEDETY 122
F+ E + H+N+++ C+GV Q + ++ E M LK +L ET
Sbjct: 98 FLMEALIISKFNHQNIVR----CIGVSLQSLP-RFILLELMAGGDLKSFL------RETR 146
Query: 123 KRPXXXXXXXXX---XIAIDVASALNYLHHDCQPVTAHCVLKPSNVLL---DDDMTARVG 176
RP +A D+A YL + H + N LL A++G
Sbjct: 147 PRPSQPSSLAMLDLLHVARDIACGCQYLEEN---HFIHRDIAARNCLLTCPGPGRVAKIG 203
Query: 177 DFGLARFLPPTRTQTSSIDVKGSIGYIAPEYGVGNEVSTIGDVYSYGILLLELM 230
DFG+AR + + ++ PE + ++ D +S+G+LL E+
Sbjct: 204 DFGMARDIYRAGYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIF 257
>pdb|1T45|A Chain A, Structural Basis For The Autoinhibition And Sti-571
Inhibition Of C- Kit Tyrosine Kinase
Length = 331
Score = 39.3 bits (90), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 26/75 (34%), Positives = 37/75 (49%), Gaps = 2/75 (2%)
Query: 157 HCVLKPSNVLLDDDMTARVGDFGLARFLPPTRTQTSSIDVKGSIGYIAPEYGVGNEVSTI 216
H L N+LL ++ DFGLAR + + + + ++APE + N V T
Sbjct: 186 HRDLAARNILLTHGRITKICDFGLARDIKNDSNYVVKGNARLPVKWMAPE-SIFNCVYTF 244
Query: 217 -GDVYSYGILLLELM 230
DV+SYGI L EL
Sbjct: 245 ESDVWSYGIFLWELF 259
>pdb|2XRW|A Chain A, Linear Binding Motifs For Jnk And For Calcineurin
Antagonistically Control The Nuclear Shuttling Of Nfat4
Length = 371
Score = 39.3 bits (90), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 27/96 (28%), Positives = 49/96 (51%), Gaps = 7/96 (7%)
Query: 157 HCVLKPSNVLLDDDMTARVGDFGLARFLPPTRTQTSSIDVKGSIGYIAPEYGVGNEVSTI 216
H LKPSN+++ D T ++ DFGLAR + T + + Y APE +G
Sbjct: 150 HRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMTPYVVTR---YYRAPEVILGMGYKEN 206
Query: 217 GDVYSYGILLLELMIREKPSDIMFEGDMNLHKFAKM 252
D++S G ++ E++ ++F G ++ ++ K+
Sbjct: 207 VDIWSVGCIMGEMI----KGGVLFPGTDHIDQWNKV 238
>pdb|3L9P|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
Length = 367
Score = 39.3 bits (90), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 41/174 (23%), Positives = 70/174 (40%), Gaps = 20/174 (11%)
Query: 63 FIAECKALRNIRHRNLIKVLTACLGVDYQGNDFKALVYEFMHNRSLKEWLYPISKEDETY 122
F+ E + H+N+++ C+GV Q + ++ E M LK +L ET
Sbjct: 121 FLMEALIISKFNHQNIVR----CIGVSLQSLP-RFILLELMAGGDLKSFL------RETR 169
Query: 123 KRPXXXXXXXXX---XIAIDVASALNYLHHDCQPVTAHCVLKPSNVLL---DDDMTARVG 176
RP +A D+A YL + H + N LL A++G
Sbjct: 170 PRPSQPSSLAMLDLLHVARDIACGCQYLEEN---HFIHRDIAARNCLLTCPGPGRVAKIG 226
Query: 177 DFGLARFLPPTRTQTSSIDVKGSIGYIAPEYGVGNEVSTIGDVYSYGILLLELM 230
DFG+AR + + ++ PE + ++ D +S+G+LL E+
Sbjct: 227 DFGMARDIYRAGYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIF 280
>pdb|1U5Q|A Chain A, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5Q|B Chain B, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5R|A Chain A, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5R|B Chain B, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
Length = 348
Score = 39.3 bits (90), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 50/205 (24%), Positives = 83/205 (40%), Gaps = 29/205 (14%)
Query: 35 SRNMLEENLISAGTFGFSHLRRQGAFKSFIAECKALRNIRHRNLIKVLTACLGVDYQGND 94
+R++ +++ +S + ++ I E + L+ +RH N I+ C Y
Sbjct: 73 ARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPNTIQ-YRGC----YLREH 127
Query: 95 FKALVYEFMHNRSLKEWLYPISKEDETYKRPXXXXXXXXXXIAIDVASALNYLH-HDCQP 153
LV E+ L S E +K+P + L YLH H+
Sbjct: 128 TAWLVMEYC--------LGSASDLLEVHKKPLQEVEIAA--VTHGALQGLAYLHSHN--- 174
Query: 154 VTAHCVLKPSNVLLDDDMTARVGDFGLARFLPPTRTQTSSIDVKGSIGYIAPEYGVG-NE 212
H +K N+LL + ++GDFG A + P G+ ++APE + +E
Sbjct: 175 -MIHRDVKAGNILLSEPGLVKLGDFGSASIMAPANX------FVGTPYWMAPEVILAMDE 227
Query: 213 VSTIG--DVYSYGILLLELMIREKP 235
G DV+S GI +EL R+ P
Sbjct: 228 GQYDGKVDVWSLGITCIELAERKPP 252
>pdb|3VUI|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M2 In Map
Kinase Jnk1
Length = 370
Score = 39.3 bits (90), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 27/96 (28%), Positives = 49/96 (51%), Gaps = 7/96 (7%)
Query: 157 HCVLKPSNVLLDDDMTARVGDFGLARFLPPTRTQTSSIDVKGSIGYIAPEYGVGNEVSTI 216
H LKPSN+++ D T ++ DFGLAR + T + + Y APE +G
Sbjct: 149 HRDLKPSNIVVKSDATLKILDFGLARTAGTSFMMTPYVVTR---YYRAPEVILGMGYKEN 205
Query: 217 GDVYSYGILLLELMIREKPSDIMFEGDMNLHKFAKM 252
D++S G ++ E++ ++F G ++ ++ K+
Sbjct: 206 VDIWSVGCIMGEMI----KGGVLFPGTDHIDQWNKV 237
>pdb|2ZV2|A Chain A, Crystal Structure Of Human CalciumCALMODULIN-Dependent
Protein Kinase Kinase 2, Beta, Camkk2 Kinase Domain In
Complex With Sto-609
Length = 298
Score = 39.3 bits (90), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 52/236 (22%), Positives = 100/236 (42%), Gaps = 37/236 (15%)
Query: 54 LRRQGAFKSFIAECKALRNIRHRNLIKVLTACLGVDYQGNDFKALVYEFMHNRSLKE--W 111
++ +G + E L+ + H N++K++ +D D +V+E ++ + E
Sbjct: 74 IQPRGPIEQVYQEIAILKKLDHPNVVKLVEV---LDDPNEDHLYMVFELVNQGPVMEVPT 130
Query: 112 LYPISKEDETYKRPXXXXXXXXXXIAIDVASALNYLHHDCQPVTAHCVLKPSNVLLDDDM 171
L P+S++ + D+ + YLH+ H +KPSN+L+ +D
Sbjct: 131 LKPLSEDQARF-------------YFQDLIKGIEYLHYQ---KIIHRDIKPSNLLVGEDG 174
Query: 172 TARVGDFGLARFLPPTRTQTSSIDVKGSIGYIAPEYGVGNEVSTIG---DVYSYGILLLE 228
++ DFG++ + S + G+ ++APE G DV++ G+ L
Sbjct: 175 HIKIADFGVSNEFKGSDALLS--NTVGTPAFMAPESLSETRKIFSGKALDVWAMGVTLYC 232
Query: 229 LMIREKPSDIMFEGDMNLH-KFAKMAL--------SNHVKDIVDSILLNDDEKLVV 275
+ + P M E M LH K AL + +KD++ +L + E +V
Sbjct: 233 FVFGQCP--FMDERIMCLHSKIKSQALEFPDQPDIAEDLKDLITRMLDKNPESRIV 286
>pdb|3VUK|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M5 In Map
Kinase Jnk1
Length = 370
Score = 39.3 bits (90), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 27/96 (28%), Positives = 49/96 (51%), Gaps = 7/96 (7%)
Query: 157 HCVLKPSNVLLDDDMTARVGDFGLARFLPPTRTQTSSIDVKGSIGYIAPEYGVGNEVSTI 216
H LKPSN+++ D T ++ DFGLAR + T + + Y APE +G
Sbjct: 149 HRDLKPSNIVVKSDATLKILDFGLARTAGTSFMMTPYVVTR---YYRAPEVILGMGYKEN 205
Query: 217 GDVYSYGILLLELMIREKPSDIMFEGDMNLHKFAKM 252
D++S G ++ E++ ++F G ++ ++ K+
Sbjct: 206 VDIWSVGCIMGEMI----KGGVLFPGTDHIDQWNKV 237
>pdb|2JKK|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
pdb|2JKO|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 39.3 bits (90), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 25/95 (26%), Positives = 48/95 (50%), Gaps = 4/95 (4%)
Query: 137 AIDVASALNYLHHDCQPVTAHCVLKPSNVLLDDDMTARVGDFGLARFLPPTRTQTSSIDV 196
A +++AL YL H + NVL+ ++GDFGL+R++ + T +
Sbjct: 117 AYQLSTALAYLESK---RFVHRDIAARNVLVSATDCVKLGDFGLSRYMEDS-TYYKASKG 172
Query: 197 KGSIGYIAPEYGVGNEVSTIGDVYSYGILLLELMI 231
K I ++APE ++ DV+ +G+ + E+++
Sbjct: 173 KLPIKWMAPESINFRRFTSASDVWMFGVCMWEILM 207
>pdb|3G0E|A Chain A, Kit Kinase Domain In Complex With Sunitinib
Length = 336
Score = 39.3 bits (90), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 26/75 (34%), Positives = 37/75 (49%), Gaps = 2/75 (2%)
Query: 157 HCVLKPSNVLLDDDMTARVGDFGLARFLPPTRTQTSSIDVKGSIGYIAPEYGVGNEVSTI 216
H L N+LL ++ DFGLAR + + + + ++APE + N V T
Sbjct: 191 HRDLAARNILLTHGRITKICDFGLARDIKNDSNYVVKGNARLPVKWMAPE-SIFNCVYTF 249
Query: 217 -GDVYSYGILLLELM 230
DV+SYGI L EL
Sbjct: 250 ESDVWSYGIFLWELF 264
>pdb|1JBP|E Chain E, Crystal Structure Of The Catalytic Subunit Of Camp-
Dependent Protein Kinase Complexed With A Substrate
Peptide, Adp And Detergent
Length = 350
Score = 39.3 bits (90), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 30/119 (25%), Positives = 55/119 (46%), Gaps = 18/119 (15%)
Query: 160 LKPSNVLLDDDMTARVGDFGLARFLPPTRTQTSSIDVKGSIGYIAPEYGVGNEVSTIGDV 219
LKP N+L+D +V DFG A+ R + + + G+ Y+APE + + D
Sbjct: 167 LKPENLLIDQQGYIQVTDFGFAK-----RVKGRTWXLCGTPEYLAPEIILSKGYNKAVDW 221
Query: 220 YSYGILLLELMIREKPSDIMFEGDMNLHKFAKMA---------LSNHVKDIVDSILLND 269
++ G+L+ E+ P F D + + K+ S+ +KD++ ++L D
Sbjct: 222 WALGVLIYEMAAGYPP----FFADEPIQIYEKIVSGKVRFPSHFSSDLKDLLRNLLQVD 276
>pdb|3VUG|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M2 In Map
Kinase Jnk1
Length = 370
Score = 39.3 bits (90), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 27/96 (28%), Positives = 49/96 (51%), Gaps = 7/96 (7%)
Query: 157 HCVLKPSNVLLDDDMTARVGDFGLARFLPPTRTQTSSIDVKGSIGYIAPEYGVGNEVSTI 216
H LKPSN+++ D T ++ DFGLAR + T + + Y APE +G
Sbjct: 149 HRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMTPYVVTR---YYRAPEVILGMGYKEN 205
Query: 217 GDVYSYGILLLELMIREKPSDIMFEGDMNLHKFAKM 252
D++S G ++ E++ ++F G ++ ++ K+
Sbjct: 206 VDIWSVGCIMGEMI----KGGVLFPGTDHIDQWNKV 237
>pdb|2J0K|A Chain A, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains.
pdb|2J0K|B Chain B, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains
Length = 656
Score = 39.3 bits (90), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 25/95 (26%), Positives = 48/95 (50%), Gaps = 4/95 (4%)
Query: 137 AIDVASALNYLHHDCQPVTAHCVLKPSNVLLDDDMTARVGDFGLARFLPPTRTQTSSIDV 196
A +++AL YL H + NVL+ ++GDFGL+R++ + T +
Sbjct: 497 AYQLSTALAYLESK---RFVHRDIAARNVLVSATDCVKLGDFGLSRYMEDS-TYYKASKG 552
Query: 197 KGSIGYIAPEYGVGNEVSTIGDVYSYGILLLELMI 231
K I ++APE ++ DV+ +G+ + E+++
Sbjct: 553 KLPIKWMAPESINFRRFTSASDVWMFGVCMWEILM 587
>pdb|1Q24|A Chain A, Pka Double Mutant Model Of Pkb In Complex With Mgatp
pdb|1Q62|A Chain A, Pka Double Mutant Model Of Pkb
Length = 350
Score = 38.9 bits (89), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 29/119 (24%), Positives = 55/119 (46%), Gaps = 18/119 (15%)
Query: 160 LKPSNVLLDDDMTARVGDFGLARFLPPTRTQTSSIDVKGSIGYIAPEYGVGNEVSTIGDV 219
LKP N+++D +V DFG A+ R + + + G+ Y+APE + + D
Sbjct: 167 LKPENLMIDQQGYIQVTDFGFAK-----RVKGRTWXLCGTPEYLAPEIILSKGYNKAVDW 221
Query: 220 YSYGILLLELMIREKPSDIMFEGDMNLHKFAKMA---------LSNHVKDIVDSILLND 269
++ G+L+ E+ P F D + + K+ S+ +KD++ ++L D
Sbjct: 222 WALGVLIYEMAAGYPP----FFADQPIQIYEKIVSGKVRFPSHFSSDLKDLLRNLLQVD 276
>pdb|2Q0B|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565a Mutation Responsible For
Pfeiffer Syndrome
pdb|2Q0B|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565a Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 38.9 bits (89), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 43/181 (23%), Positives = 79/181 (43%), Gaps = 29/181 (16%)
Query: 63 FIAECKALRNI-RHRNLIKVLTACLG-------VDYQGNDFKALVYEFMHNRSLK--EWL 112
++E + ++ I +H+N+I +L AC V Y K + E++ R E+
Sbjct: 87 LVSEMEMMKMIGKHKNIINLLGACTQDGPLYVIVAYAS---KGNLREYLRARRPPGMEYS 143
Query: 113 YPISK---EDETYKRPXXXXXXXXXXIAIDVASALNYL-HHDCQPVTAHCVLKPSNVLLD 168
Y I++ E T+K +A + YL C H L NVL+
Sbjct: 144 YDINRVPEEQMTFK--------DLVSCTYQLARGMEYLASQKC----IHRDLAARNVLVT 191
Query: 169 DDMTARVGDFGLARFLPPTRTQTSSIDVKGSIGYIAPEYGVGNEVSTIGDVYSYGILLLE 228
++ ++ DFGLAR + + + + + ++APE + DV+S+G+L+ E
Sbjct: 192 ENNVMKIADFGLARDINNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWE 251
Query: 229 L 229
+
Sbjct: 252 I 252
>pdb|1T46|A Chain A, Structural Basis For The Autoinhibition And Sti-571
Inhibition Of C-kit Tyrosine Kinase
Length = 313
Score = 38.9 bits (89), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 26/75 (34%), Positives = 37/75 (49%), Gaps = 2/75 (2%)
Query: 157 HCVLKPSNVLLDDDMTARVGDFGLARFLPPTRTQTSSIDVKGSIGYIAPEYGVGNEVSTI 216
H L N+LL ++ DFGLAR + + + + ++APE + N V T
Sbjct: 168 HRDLAARNILLTHGRITKICDFGLARDIKNDSNYVVKGNARLPVKWMAPE-SIFNCVYTF 226
Query: 217 -GDVYSYGILLLELM 230
DV+SYGI L EL
Sbjct: 227 ESDVWSYGIFLWELF 241
>pdb|2DYL|A Chain A, Crystal Structure Of Human Mitogen-Activated Protein
Kinase Kinase 7 Activated Mutant (S287d, T291d)
Length = 318
Score = 38.9 bits (89), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 31/105 (29%), Positives = 49/105 (46%), Gaps = 10/105 (9%)
Query: 136 IAIDVASALNYLHHDCQPVTAHCVLKPSNVLLDDDMTARVGDFGLARFLPPTRTQTSSID 195
+ + + AL YL + H +KPSN+LLD+ ++ DFG++ L + + S
Sbjct: 129 MTVAIVKALYYLKE--KHGVIHRDVKPSNILLDERGQIKLCDFGISGRLVDDKAKDRSA- 185
Query: 196 VKGSIGYIAPEY-----GVGNEVSTIGDVYSYGILLLELMIREKP 235
G Y+APE + DV+S GI L+EL + P
Sbjct: 186 --GCAAYMAPERIDPPDPTKPDYDIRADVWSLGISLVELATGQFP 228
>pdb|1U59|A Chain A, Crystal Structure Of The Zap-70 Kinase Domain In Complex
With Staurosporine
Length = 287
Score = 38.9 bits (89), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 30/97 (30%), Positives = 47/97 (48%), Gaps = 11/97 (11%)
Query: 145 NYLHHDCQPVTAHCVLKPSNVLLDDDMTARVGDFGLARFLPPTRT-QTSSIDVKGSIGYI 203
N++H D L NVLL + A++ DFGL++ L + T+ K + +
Sbjct: 130 NFVHRD---------LAARNVLLVNRHYAKISDFGLSKALGADDSYYTARSAGKWPLKWY 180
Query: 204 APEYGVGNEVSTIGDVYSYGILLLE-LMIREKPSDIM 239
APE + S+ DV+SYG+ + E L +KP M
Sbjct: 181 APECINFRKFSSRSDVWSYGVTMWEALSYGQKPYKKM 217
>pdb|3ALN|A Chain A, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALN|B Chain B, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALN|C Chain C, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALO|A Chain A, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Ternary Complex With Amp-Pnp And P38 Peptide
pdb|3VUT|A Chain A, Crystal Structures Of Non-Phosphorylated Map2k4
pdb|3VUT|B Chain B, Crystal Structures Of Non-Phosphorylated Map2k4
Length = 327
Score = 38.9 bits (89), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 34/105 (32%), Positives = 50/105 (47%), Gaps = 11/105 (10%)
Query: 136 IAIDVASALNYLHHDCQPVTAHCVLKPSNVLLDDDMTARVGDFGLARFLPPTRTQTSSID 195
I + ALN+L + + + H +KPSN+LLD ++ DFG++ L + +T
Sbjct: 130 ITLATVKALNHLKENLKII--HRDIKPSNILLDRSGNIKLCDFGISGQLVDSIAKTRD-- 185
Query: 196 VKGSIGYIAPEYGVGNEVSTIG-----DVYSYGILLLELMIREKP 235
G Y+APE + S G DV+S GI L EL P
Sbjct: 186 -AGCRPYMAPE-RIDPSASRQGYDVRSDVWSLGITLYELATGRFP 228
>pdb|3PZE|A Chain A, Jnk1 In Complex With Inhibitor
Length = 358
Score = 38.9 bits (89), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 27/86 (31%), Positives = 44/86 (51%), Gaps = 7/86 (8%)
Query: 157 HCVLKPSNVLLDDDMTARVGDFGLARFLPPTRTQTSSIDVKGSIGYIAPEYGVGNEVSTI 216
H LKPSN+++ D T ++ DFGLAR + T + + Y APE +G
Sbjct: 143 HRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMTPYVVTR---YYRAPEVILGMGYKEN 199
Query: 217 GDVYSYGILLLELMIREKPSDIMFEG 242
D++S G ++ E++ + I+F G
Sbjct: 200 VDLWSVGCIMGEMVCHK----ILFPG 221
>pdb|3MDY|A Chain A, Crystal Structure Of The Cytoplasmic Domain Of The Bone
Morp Protein Receptor Type-1b (Bmpr1b) In Complex With
Fkbp12 An 193189
pdb|3MDY|C Chain C, Crystal Structure Of The Cytoplasmic Domain Of The Bone
Morp Protein Receptor Type-1b (Bmpr1b) In Complex With
Fkbp12 An 193189
Length = 337
Score = 38.9 bits (89), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 47/197 (23%), Positives = 87/197 (44%), Gaps = 43/197 (21%)
Query: 73 IRHRNLIKVLTACLGVDYQGNDFKALVY---EFMHNRSLKEWLYPISKEDETYKRPXXXX 129
+RH N++ + A D +G +Y ++ N SL ++L + + ++ +
Sbjct: 88 MRHENILGFIAA----DIKGTGSWTQLYLITDYHENGSLYDYLKSTTLDAKSMLK----- 138
Query: 130 XXXXXXIAIDVASALNYLHHDC-----QPVTAHCVLKPSNVLLDDDMTARVGDFGLA-RF 183
+A S L +LH + +P AH LK N+L+ + T + D GLA +F
Sbjct: 139 ------LAYSSVSGLCHLHTEIFSTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVKF 192
Query: 184 LPPTRTQTSSIDVK-----GSIGYIAPEYGVGNE--------VSTIGDVYSYGILLLELM 230
+ + T+ +D+ G+ Y+ PE V +E + D+YS+G++L E+
Sbjct: 193 I----SDTNEVDIPPNTRVGTKRYMPPE--VLDESLNRNHFQSYIMADMYSFGLILWEVA 246
Query: 231 IREKPSDIMFEGDMNLH 247
R I+ E + H
Sbjct: 247 RRCVSGGIVEEYQLPYH 263
>pdb|3ELJ|A Chain A, Jnk1 Complexed With A Bis-Anilino-Pyrrolopyrimidine
Inhibitor
Length = 369
Score = 38.9 bits (89), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 27/86 (31%), Positives = 44/86 (51%), Gaps = 7/86 (8%)
Query: 157 HCVLKPSNVLLDDDMTARVGDFGLARFLPPTRTQTSSIDVKGSIGYIAPEYGVGNEVSTI 216
H LKPSN+++ D T ++ DFGLAR + T + + Y APE +G
Sbjct: 154 HRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMTPYVVTR---YYRAPEVILGMGYKEN 210
Query: 217 GDVYSYGILLLELMIREKPSDIMFEG 242
D++S G ++ E++ + I+F G
Sbjct: 211 VDLWSVGCIMGEMVCHK----ILFPG 232
>pdb|2W4O|A Chain A, Crystal Structure Of Human Camk4 In Complex With 4-Amino(
Sulfamoyl-Phenylamino)-Triazole-Carbothioic Acid (2,6-
Difluoro-Phenyl)-Amide)
Length = 349
Score = 38.5 bits (88), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 39/146 (26%), Positives = 61/146 (41%), Gaps = 19/146 (13%)
Query: 140 VASALNYLHHDCQPVTAHCVLKPSNVLLDD---DMTARVGDFGLARFLPPTRTQTSSIDV 196
+ A+ YLH + H LKP N+L D ++ DFGL++ + Q V
Sbjct: 157 ILEAVAYLHENG---IVHRDLKPENLLYATPAPDAPLKIADFGLSKIV---EHQVLMKTV 210
Query: 197 KGSIGYIAPEYGVGNEVSTIGDVYSYGILL------LELMIREKPSDIMFEGDMNLHKFA 250
G+ GY APE G D++S GI+ E E+ MF +N +
Sbjct: 211 CGTPGYCAPEILRGCAYGPEVDMWSVGIITYILLCGFEPFYDERGDQFMFRRILNCEYYF 270
Query: 251 KMALSNHV----KDIVDSILLNDDEK 272
+ V KD+V +++ D +K
Sbjct: 271 ISPWWDEVSLNAKDLVRKLIVLDPKK 296
>pdb|3O17|A Chain A, Crystal Structure Of Jnk1-Alpha1 Isoform
pdb|3O17|B Chain B, Crystal Structure Of Jnk1-Alpha1 Isoform
pdb|3O2M|A Chain A, Crystal Structure Of Jnk1-Alpha1 Isoform Complex With A
Biaryl Tetrazol (A-82118)
pdb|3O2M|B Chain B, Crystal Structure Of Jnk1-Alpha1 Isoform Complex With A
Biaryl Tetrazol (A-82118)
Length = 370
Score = 38.5 bits (88), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 28/89 (31%), Positives = 46/89 (51%), Gaps = 13/89 (14%)
Query: 157 HCVLKPSNVLLDDDMTARVGDFGLARFLPPTRTQTSSIDVKGSI---GYIAPEYGVGNEV 213
H LKPSN+++ D T ++ DFGLA RT +S ++ + Y APE +G
Sbjct: 149 HRDLKPSNIVVKSDCTLKILDFGLA------RTAGTSFMMEPEVVTRYYRAPEVILGMGY 202
Query: 214 STIGDVYSYGILLLELMIREKPSDIMFEG 242
D++S G ++ E++ + I+F G
Sbjct: 203 KENVDIWSVGCIMGEMVCHK----ILFPG 227
>pdb|3DLS|A Chain A, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|B Chain B, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|C Chain C, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|D Chain D, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|E Chain E, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|F Chain F, Crystal Structure Of Human Pas Kinase Bound To Adp
Length = 335
Score = 38.5 bits (88), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 42/171 (24%), Positives = 67/171 (39%), Gaps = 21/171 (12%)
Query: 66 ECKALRNIRHRNLIKVLTACLGVDYQGNDFKALVYEFMHNRSLKEWLYPISKEDETYKRP 125
E L + H N+IKVL ++ F LV E H L L+ P
Sbjct: 79 EIAILSRVEHANIIKVLDI-----FENQGFFQLVME-KHGSGLD--LFAFIDRHPRLDEP 130
Query: 126 XXXXXXXXXXIAIDVASALNYLHHDCQPVTAHCVLKPSNVLLDDDMTARVGDFGLARFLP 185
A+ + +H D +K N+++ +D T ++ DFG A +L
Sbjct: 131 LASYIFRQLVSAVGYLRLKDIIHRD---------IKDENIVIAEDFTIKLIDFGSAAYLE 181
Query: 186 PTRTQTSSIDVKGSIGYIAPEYGVGNEVSTIG-DVYSYGILLLELMIREKP 235
+ + G+I Y APE +GN +++S G+ L L+ E P
Sbjct: 182 RGKLFYTFC---GTIEYCAPEVLMGNPYRGPELEMWSLGVTLYTLVFEENP 229
>pdb|3P1A|A Chain A, Structure Of Human Membrane-Associated Tyrosine- And
Threonine- Specific Cdc2-Inhibitory Kinase Myt1 (Pkmyt1)
Length = 311
Score = 38.5 bits (88), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 30/91 (32%), Positives = 44/91 (48%), Gaps = 7/91 (7%)
Query: 139 DVASALNYLHHDCQPVTAHCVLKPSNVLLDDDMTARVGDFGLARFLPPTRTQTSSIDVKG 198
D AL +LH H +KP+N+ L ++GDFGL L T + +G
Sbjct: 165 DTLLALAHLHSQG---LVHLDVKPANIFLGPRGRCKLGDFGL---LVELGTAGAGEVQEG 218
Query: 199 SIGYIAPEYGVGNEVSTIGDVYSYGILLLEL 229
Y+APE G+ T DV+S G+ +LE+
Sbjct: 219 DPRYMAPELLQGS-YGTAADVFSLGLTILEV 248
>pdb|1SYK|A Chain A, Crystal Structure Of E230q Mutant Of Camp-Dependent
Protein Kinase Reveals Unexpected Apoenzyme Conformation
pdb|1SYK|B Chain B, Crystal Structure Of E230q Mutant Of Camp-Dependent
Protein Kinase Reveals Unexpected Apoenzyme Conformation
Length = 350
Score = 38.5 bits (88), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 29/119 (24%), Positives = 55/119 (46%), Gaps = 18/119 (15%)
Query: 160 LKPSNVLLDDDMTARVGDFGLARFLPPTRTQTSSIDVKGSIGYIAPEYGVGNEVSTIGDV 219
LKP N+L+D +V DFG A+ R + + + G+ Y+APE + + D
Sbjct: 167 LKPENLLIDQQGYIQVTDFGFAK-----RVKGRTWXLCGTPEYLAPEIILSKGYNKAVDW 221
Query: 220 YSYGILLLELMIREKPSDIMFEGDMNLHKFAKMA---------LSNHVKDIVDSILLND 269
++ G+L+ ++ P F D + + K+ S+ +KD++ ++L D
Sbjct: 222 WALGVLIYQMAAGYPP----FFADQPIQIYEKIVSGKVRFPSHFSSDLKDLLRNLLQVD 276
>pdb|3IS5|A Chain A, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|B Chain B, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|C Chain C, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|D Chain D, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|E Chain E, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|F Chain F, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
Length = 285
Score = 38.5 bits (88), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 46/179 (25%), Positives = 73/179 (40%), Gaps = 21/179 (11%)
Query: 55 RRQGAFKSFIAECKALRNIRHRNLIKVLTACLGVDYQGNDFKALVYEFMHNRSLKEWLYP 114
R Q + AE + L+++ H N+IK+ DY +Y M E L
Sbjct: 59 RSQVPMEQIEAEIEVLKSLDHPNIIKIFEVF--EDYHN------MYIVMETCEGGELLER 110
Query: 115 ISKEDETYKRPXXXXXXXXXXIAIDVASALNYLHHDCQPVTAHCVLKPSNVLLDD---DM 171
I R + + +AL Y H Q V H LKP N+L D
Sbjct: 111 IVS---AQARGKALSEGYVAELMKQMMNALAYFH--SQHVV-HKDLKPENILFQDTSPHS 164
Query: 172 TARVGDFGLARFLPPTRTQTSSIDVKGSIGYIAPEYGVGNEVSTIGDVYSYGILLLELM 230
++ DFGLA ++ S + G+ Y+APE +V+ D++S G+++ L+
Sbjct: 165 PIKIIDFGLAELF---KSDEHSTNAAGTALYMAPEV-FKRDVTFKCDIWSAGVVMYFLL 219
>pdb|1H4L|A Chain A, Structure And Regulation Of The Cdk5-P25(Nck5a) Complex
pdb|1H4L|B Chain B, Structure And Regulation Of The Cdk5-P25(Nck5a) Complex
Length = 292
Score = 38.5 bits (88), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 31/101 (30%), Positives = 51/101 (50%), Gaps = 17/101 (16%)
Query: 145 NYLHHDCQPVTAHCVLKPSNVLLDDDMTARVGDFGLAR-FLPPTRTQTSSIDVKGSIGYI 203
N LH D LKP N+L++ + ++ DFGLAR F P R ++ + ++ Y
Sbjct: 121 NVLHRD---------LKPQNLLINRNGELKLADFGLARAFGIPVRCYSAEV---VTLWYR 168
Query: 204 APEYGVGNEV-STIGDVYSYGILLLELMIREKPSDIMFEGD 243
P+ G ++ ST D++S G + EL +P +F G+
Sbjct: 169 PPDVLFGAKLYSTSIDMWSAGCIFAELANAARP---LFPGN 206
>pdb|3SAY|A Chain A, Crystal Structure Of Human Glycogen Synthase Kinase 3 Beta
(Gsk3b) In Complex With Inhibitor 142
pdb|3SAY|B Chain B, Crystal Structure Of Human Glycogen Synthase Kinase 3 Beta
(Gsk3b) In Complex With Inhibitor 142
Length = 430
Score = 38.5 bits (88), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 33/99 (33%), Positives = 51/99 (51%), Gaps = 11/99 (11%)
Query: 157 HCVLKPSNVLLDDDMTA-RVGDFGLARFLPPTRTQTSSIDVKGSIGYIAPE--YGVGNEV 213
H +KP N+LLD D ++ DFG A+ L S I S Y APE +G +
Sbjct: 179 HRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXI---CSRYYRAPELIFGATDYT 235
Query: 214 STIGDVYSYGILLLELMIREKPSDIMFEGDMNLHKFAKM 252
S+I DV+S G +L EL++ + +F GD + + ++
Sbjct: 236 SSI-DVWSAGCVLAELLLGQP----IFPGDSGVDQLVEI 269
>pdb|1GNG|A Chain A, Glycogen Synthase Kinase-3 Beta (Gsk3) Complex With
Frattide Peptide
pdb|1GNG|B Chain B, Glycogen Synthase Kinase-3 Beta (Gsk3) Complex With
Frattide Peptide
Length = 378
Score = 38.5 bits (88), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 33/99 (33%), Positives = 51/99 (51%), Gaps = 11/99 (11%)
Query: 157 HCVLKPSNVLLDDDMTA-RVGDFGLARFLPPTRTQTSSIDVKGSIGYIAPE--YGVGNEV 213
H +KP N+LLD D ++ DFG A+ L S I S Y APE +G +
Sbjct: 164 HRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXI---CSRYYRAPELIFGATDYT 220
Query: 214 STIGDVYSYGILLLELMIREKPSDIMFEGDMNLHKFAKM 252
S+I DV+S G +L EL++ + +F GD + + ++
Sbjct: 221 SSI-DVWSAGCVLAELLLGQP----IFPGDSGVDQLVEI 254
>pdb|4AFJ|A Chain A, 5-Aryl-4-Carboxamide-1,3-Oxazoles: Potent And Selective
Gsk-3 Inhibitors
pdb|4AFJ|B Chain B, 5-Aryl-4-Carboxamide-1,3-Oxazoles: Potent And Selective
Gsk-3 Inhibitors
Length = 367
Score = 38.5 bits (88), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 33/99 (33%), Positives = 51/99 (51%), Gaps = 11/99 (11%)
Query: 157 HCVLKPSNVLLDDDMTA-RVGDFGLARFLPPTRTQTSSIDVKGSIGYIAPE--YGVGNEV 213
H +KP N+LLD D ++ DFG A+ L S I S Y APE +G +
Sbjct: 153 HRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXI---CSRYYRAPELIFGATDYT 209
Query: 214 STIGDVYSYGILLLELMIREKPSDIMFEGDMNLHKFAKM 252
S+I DV+S G +L EL++ + +F GD + + ++
Sbjct: 210 SSI-DVWSAGCVLAELLLGQP----IFPGDSGVDQLVEI 243
>pdb|4DIT|A Chain A, Crystal Structure Of Gsk3beta In Complex With A
Imidazopyridine Inhibitor
Length = 382
Score = 38.5 bits (88), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 33/99 (33%), Positives = 51/99 (51%), Gaps = 11/99 (11%)
Query: 157 HCVLKPSNVLLDDDMTA-RVGDFGLARFLPPTRTQTSSIDVKGSIGYIAPE--YGVGNEV 213
H +KP N+LLD D ++ DFG A+ L S I S Y APE +G +
Sbjct: 157 HRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXI---CSRYYRAPELIFGATDYT 213
Query: 214 STIGDVYSYGILLLELMIREKPSDIMFEGDMNLHKFAKM 252
S+I DV+S G +L EL++ + +F GD + + ++
Sbjct: 214 SSI-DVWSAGCVLAELLLGQP----IFPGDSGVDQLVEI 247
>pdb|4I1Z|A Chain A, Crystal Structure Of The Monomeric (v948r) Form Of The
Gefitinib/erlotinib Resistant Egfr Kinase Domain
L858r+t790m
pdb|4I22|A Chain A, Structure Of The Monomeric (v948r)gefitinib/erlotinib
Resistant Double Mutant (l858r+t790m) Egfr Kinase Domain
Co-crystallized With Gefitinib
Length = 329
Score = 38.1 bits (87), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 29/101 (28%), Positives = 45/101 (44%), Gaps = 4/101 (3%)
Query: 138 IDVASALNYLHHDCQPVTAHCVLKPSNVLLDDDMTARVGDFGLARFLPPTRTQTSSIDVK 197
+ +A +NYL H L NVL+ ++ DFG A+ L + + K
Sbjct: 126 VQIAKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGGK 182
Query: 198 GSIGYIAPEYGVGNEVSTIGDVYSYGILLLELM-IREKPSD 237
I ++A E + + DV+SYG+ + ELM KP D
Sbjct: 183 VPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYD 223
>pdb|3UTO|A Chain A, Twitchin Kinase Region From C.Elegans
(Fn31-Nl-Kin-Crd-Ig26)
pdb|3UTO|B Chain B, Twitchin Kinase Region From C.Elegans
(Fn31-Nl-Kin-Crd-Ig26)
Length = 573
Score = 38.1 bits (87), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 50/217 (23%), Positives = 81/217 (37%), Gaps = 35/217 (16%)
Query: 66 ECKALRNIRHRNLIKVLTACLGVDYQGNDFKALVYEFMHNRSLKEWLYPISKEDETYKRP 125
E + + +RH L+ + A ++ ++ ++YEFM L E ++ E
Sbjct: 204 EIQTMSVLRHPTLVNLHDA-----FEDDNEMVMIYEFMSGGELFE---KVADEHNKMSED 255
Query: 126 XXXXXXXXXXIAIDVASALNYLHHDCQPVTAHCVLKPSNVLLDDDMTARVGDFGLARFLP 185
+ NY+H D +P K SN L ++ DFGL L
Sbjct: 256 EAVEYMRQVCKGLCHMHENNYVHLDLKPENIMFTTKRSNEL-------KLIDFGLTAHLD 308
Query: 186 PTRTQTSSIDVKGSIGYIAPEYGVGNEVSTIGDVYSYGILLLELMIREKPSDIMFEG--- 242
P ++ + G+ + APE G V D++S G+L L+ P F G
Sbjct: 309 PKQSVKVTT---GTAEFAAPEVAEGKPVGYYTDMWSVGVLSYILLSGLSP----FGGEND 361
Query: 243 ----------DMNLHKFAKMALSNHVKDIVDSILLND 269
D N+ A +S KD + +LL D
Sbjct: 362 DETLRNVKSCDWNMDDSAFSGISEDGKDFIRKLLLAD 398
>pdb|3W2O|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Tak-285
pdb|3W2P|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Compound 2
pdb|3W2Q|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Hki-272
pdb|3W2R|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Compound 4
Length = 331
Score = 38.1 bits (87), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 29/101 (28%), Positives = 45/101 (44%), Gaps = 4/101 (3%)
Query: 138 IDVASALNYLHHDCQPVTAHCVLKPSNVLLDDDMTARVGDFGLARFLPPTRTQTSSIDVK 197
+ +A +NYL H L NVL+ ++ DFG A+ L + + K
Sbjct: 128 VQIAKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGGK 184
Query: 198 GSIGYIAPEYGVGNEVSTIGDVYSYGILLLELM-IREKPSD 237
I ++A E + + DV+SYG+ + ELM KP D
Sbjct: 185 VPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYD 225
>pdb|3ZRK|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRK|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRL|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRL|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRM|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As Gsk-
3beta Inhibitors
pdb|3ZRM|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As Gsk-
3beta Inhibitors
Length = 371
Score = 38.1 bits (87), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 33/99 (33%), Positives = 51/99 (51%), Gaps = 11/99 (11%)
Query: 157 HCVLKPSNVLLDDDMTA-RVGDFGLARFLPPTRTQTSSIDVKGSIGYIAPE--YGVGNEV 213
H +KP N+LLD D ++ DFG A+ L S I S Y APE +G +
Sbjct: 157 HRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXI---CSRYYRAPELIFGATDYT 213
Query: 214 STIGDVYSYGILLLELMIREKPSDIMFEGDMNLHKFAKM 252
S+I DV+S G +L EL++ + +F GD + + ++
Sbjct: 214 SSI-DVWSAGCVLAELLLGQP----IFPGDSGVDQLVEI 247
>pdb|4I20|A Chain A, Crystal Structure Of Monomeric (v948r) Primary Oncogenic
Mutant L858r Egfr Kinase Domain
Length = 329
Score = 38.1 bits (87), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 29/101 (28%), Positives = 45/101 (44%), Gaps = 4/101 (3%)
Query: 138 IDVASALNYLHHDCQPVTAHCVLKPSNVLLDDDMTARVGDFGLARFLPPTRTQTSSIDVK 197
+ +A +NYL H L NVL+ ++ DFG A+ L + + K
Sbjct: 126 VQIAKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGGK 182
Query: 198 GSIGYIAPEYGVGNEVSTIGDVYSYGILLLELM-IREKPSD 237
I ++A E + + DV+SYG+ + ELM KP D
Sbjct: 183 VPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYD 223
>pdb|1VJY|A Chain A, Crystal Structure Of A Naphthyridine Inhibitor Of Human
Tgf- Beta Type I Receptor
pdb|3GXL|A Chain A, Alk-5 Kinase Complex With Gw857175
pdb|3HMM|A Chain A, Structure Of Alk5 + Gw855857
Length = 303
Score = 38.1 bits (87), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 32/113 (28%), Positives = 52/113 (46%), Gaps = 19/113 (16%)
Query: 136 IAIDVASALNYLHHDC-----QPVTAHCVLKPSNVLLDDDMTARVGDFGLARFLPPTRTQ 190
+A+ AS L +LH + +P AH LK N+L+ + T + D GLA +
Sbjct: 105 LALSTASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLA---VRHDSA 161
Query: 191 TSSIDVK-----GSIGYIAPEYGVGN------EVSTIGDVYSYGILLLELMIR 232
T +ID+ G+ Y+APE + E D+Y+ G++ E+ R
Sbjct: 162 TDTIDIAPNHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIARR 214
>pdb|2ITT|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Aee788
pdb|2ITU|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Afn941
pdb|2ITV|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Amp-pnp
pdb|2ITZ|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Iressa
Length = 327
Score = 38.1 bits (87), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 29/101 (28%), Positives = 45/101 (44%), Gaps = 4/101 (3%)
Query: 138 IDVASALNYLHHDCQPVTAHCVLKPSNVLLDDDMTARVGDFGLARFLPPTRTQTSSIDVK 197
+ +A +NYL H L NVL+ ++ DFG A+ L + + K
Sbjct: 124 VQIAKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGGK 180
Query: 198 GSIGYIAPEYGVGNEVSTIGDVYSYGILLLELM-IREKPSD 237
I ++A E + + DV+SYG+ + ELM KP D
Sbjct: 181 VPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYD 221
>pdb|1KOA|A Chain A, Twitchin Kinase Fragment (C.Elegans), Autoregulated
Protein Kinase And Immunoglobulin Domains
Length = 491
Score = 38.1 bits (87), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 38/138 (27%), Positives = 55/138 (39%), Gaps = 27/138 (19%)
Query: 145 NYLHHDCQPVTAHCVLKPSNVLLDDDMTARVGDFGLARFLPPTRTQTSSIDVKGSIGYIA 204
NY+H D +P K SN L ++ DFGL L P ++ + G+ + A
Sbjct: 169 NYVHLDLKPENIMFTTKRSNEL-------KLIDFGLTAHLDPKQSVKVTT---GTAEFAA 218
Query: 205 PEYGVGNEVSTIGDVYSYGILLLELMIREKPSDIMFEG-------------DMNLHKFAK 251
PE G V D++S G+L L+ P F G D N+ A
Sbjct: 219 PEVAEGKPVGYYTDMWSVGVLSYILLSGLSP----FGGENDDETLRNVKSCDWNMDDSAF 274
Query: 252 MALSNHVKDIVDSILLND 269
+S KD + +LL D
Sbjct: 275 SGISEDGKDFIRKLLLAD 292
>pdb|2OW3|A Chain A, Glycogen Synthase Kinase-3 Beta In Complex With Bis-
(Indole)maleimide Pyridinophane Inhibitor
pdb|2OW3|B Chain B, Glycogen Synthase Kinase-3 Beta In Complex With Bis-
(Indole)maleimide Pyridinophane Inhibitor
Length = 352
Score = 38.1 bits (87), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 33/99 (33%), Positives = 51/99 (51%), Gaps = 11/99 (11%)
Query: 157 HCVLKPSNVLLDDDMTA-RVGDFGLARFLPPTRTQTSSIDVKGSIGYIAPE--YGVGNEV 213
H +KP N+LLD D ++ DFG A+ L S I S Y APE +G +
Sbjct: 145 HRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXI---CSRYYRAPELIFGATDYT 201
Query: 214 STIGDVYSYGILLLELMIREKPSDIMFEGDMNLHKFAKM 252
S+I DV+S G +L EL++ + +F GD + + ++
Sbjct: 202 SSI-DVWSAGCVLAELLLGQP----IFPGDSGVDQLVEI 235
>pdb|1RW8|A Chain A, Crystal Structure Of Tgf-Beta Receptor I Kinase With Atp
Site Inhibitor
Length = 301
Score = 38.1 bits (87), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 32/113 (28%), Positives = 52/113 (46%), Gaps = 19/113 (16%)
Query: 136 IAIDVASALNYLHHDC-----QPVTAHCVLKPSNVLLDDDMTARVGDFGLARFLPPTRTQ 190
+A+ AS L +LH + +P AH LK N+L+ + T + D GLA +
Sbjct: 106 LALSTASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLA---VRHDSA 162
Query: 191 TSSIDVK-----GSIGYIAPEYGVGN------EVSTIGDVYSYGILLLELMIR 232
T +ID+ G+ Y+APE + E D+Y+ G++ E+ R
Sbjct: 163 TDTIDIAPNHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIARR 215
>pdb|4I21|A Chain A, Crystal Structure Of L858r + T790m Egfr Kinase Domain In
Complex With Mig6 Peptide
pdb|4I21|B Chain B, Crystal Structure Of L858r + T790m Egfr Kinase Domain In
Complex With Mig6 Peptide
Length = 329
Score = 38.1 bits (87), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 29/101 (28%), Positives = 45/101 (44%), Gaps = 4/101 (3%)
Query: 138 IDVASALNYLHHDCQPVTAHCVLKPSNVLLDDDMTARVGDFGLARFLPPTRTQTSSIDVK 197
+ +A +NYL H L NVL+ ++ DFG A+ L + + K
Sbjct: 126 VQIAKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGGK 182
Query: 198 GSIGYIAPEYGVGNEVSTIGDVYSYGILLLELM-IREKPSD 237
I ++A E + + DV+SYG+ + ELM KP D
Sbjct: 183 VPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYD 223
>pdb|3F7Z|A Chain A, X-ray Co-crystal Structure Of Glycogen Synthase Kinase
3beta In Complex With An Inhibitor
pdb|3F7Z|B Chain B, X-ray Co-crystal Structure Of Glycogen Synthase Kinase
3beta In Complex With An Inhibitor
Length = 350
Score = 38.1 bits (87), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 33/99 (33%), Positives = 51/99 (51%), Gaps = 11/99 (11%)
Query: 157 HCVLKPSNVLLDDDMTA-RVGDFGLARFLPPTRTQTSSIDVKGSIGYIAPE--YGVGNEV 213
H +KP N+LLD D ++ DFG A+ L S I S Y APE +G +
Sbjct: 146 HRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXI---CSRYYRAPELIFGATDYT 202
Query: 214 STIGDVYSYGILLLELMIREKPSDIMFEGDMNLHKFAKM 252
S+I DV+S G +L EL++ + +F GD + + ++
Sbjct: 203 SSI-DVWSAGCVLAELLLGQP----IFPGDSGVDQLVEI 236
>pdb|2EB3|A Chain A, Crystal Structure Of Mutated Egfr Kinase Domain (L858r) In
Complex With Amppnp
Length = 334
Score = 38.1 bits (87), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 29/101 (28%), Positives = 45/101 (44%), Gaps = 4/101 (3%)
Query: 138 IDVASALNYLHHDCQPVTAHCVLKPSNVLLDDDMTARVGDFGLARFLPPTRTQTSSIDVK 197
+ +A +NYL H L NVL+ ++ DFG A+ L + + K
Sbjct: 131 VQIAKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGGK 187
Query: 198 GSIGYIAPEYGVGNEVSTIGDVYSYGILLLELM-IREKPSD 237
I ++A E + + DV+SYG+ + ELM KP D
Sbjct: 188 VPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYD 228
>pdb|3F88|A Chain A, Glycogen Synthase Kinase 3beta Inhibitor Complex
pdb|3F88|B Chain B, Glycogen Synthase Kinase 3beta Inhibitor Complex
Length = 349
Score = 38.1 bits (87), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 33/99 (33%), Positives = 51/99 (51%), Gaps = 11/99 (11%)
Query: 157 HCVLKPSNVLLDDDMTA-RVGDFGLARFLPPTRTQTSSIDVKGSIGYIAPE--YGVGNEV 213
H +KP N+LLD D ++ DFG A+ L S I S Y APE +G +
Sbjct: 145 HRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXI---CSRYYRAPELIFGATDYT 201
Query: 214 STIGDVYSYGILLLELMIREKPSDIMFEGDMNLHKFAKM 252
S+I DV+S G +L EL++ + +F GD + + ++
Sbjct: 202 SSI-DVWSAGCVLAELLLGQP----IFPGDSGVDQLVEI 235
>pdb|3ZDI|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide And Inhibitor 7d
Length = 350
Score = 38.1 bits (87), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 33/99 (33%), Positives = 51/99 (51%), Gaps = 11/99 (11%)
Query: 157 HCVLKPSNVLLDDDMTA-RVGDFGLARFLPPTRTQTSSIDVKGSIGYIAPE--YGVGNEV 213
H +KP N+LLD D ++ DFG A+ L S I S Y APE +G +
Sbjct: 145 HRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXI---CSRYYRAPELIFGATDYT 201
Query: 214 STIGDVYSYGILLLELMIREKPSDIMFEGDMNLHKFAKM 252
S+I DV+S G +L EL++ + +F GD + + ++
Sbjct: 202 SSI-DVWSAGCVLAELLLGQP----IFPGDSGVDQLVEI 235
>pdb|3TZM|A Chain A, Tgf-Beta Receptor Type 1 In Complex With Sb431542
Length = 309
Score = 38.1 bits (87), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 32/113 (28%), Positives = 52/113 (46%), Gaps = 19/113 (16%)
Query: 136 IAIDVASALNYLHHDC-----QPVTAHCVLKPSNVLLDDDMTARVGDFGLARFLPPTRTQ 190
+A+ AS L +LH + +P AH LK N+L+ + T + D GLA +
Sbjct: 111 LALSTASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLA---VRHDSA 167
Query: 191 TSSIDVK-----GSIGYIAPEYGVGN------EVSTIGDVYSYGILLLELMIR 232
T +ID+ G+ Y+APE + E D+Y+ G++ E+ R
Sbjct: 168 TDTIDIAPNHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIARR 220
>pdb|1Q5K|A Chain A, Crystal Structure Of Glycogen Synthase Kinase 3 In
Complexed With Inhibitor
pdb|1Q5K|B Chain B, Crystal Structure Of Glycogen Synthase Kinase 3 In
Complexed With Inhibitor
pdb|3I4B|A Chain A, Crystal Structure Of Gsk3b In Complex With A
Pyrimidylpyrrole Inhibitor
pdb|3I4B|B Chain B, Crystal Structure Of Gsk3b In Complex With A
Pyrimidylpyrrole Inhibitor
pdb|3L1S|A Chain A, 3-Aryl-4-(Arylhydrazono)-1h-Pyrazol-5-Ones: Highly Ligand
Efficient And Potent Inhibitors Of Gsk3
pdb|3L1S|B Chain B, 3-Aryl-4-(Arylhydrazono)-1h-Pyrazol-5-Ones: Highly Ligand
Efficient And Potent Inhibitors Of Gsk3
Length = 414
Score = 38.1 bits (87), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 33/99 (33%), Positives = 51/99 (51%), Gaps = 11/99 (11%)
Query: 157 HCVLKPSNVLLDDDMTA-RVGDFGLARFLPPTRTQTSSIDVKGSIGYIAPE--YGVGNEV 213
H +KP N+LLD D ++ DFG A+ L S I S Y APE +G +
Sbjct: 173 HRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYI---CSRYYRAPELIFGATDYT 229
Query: 214 STIGDVYSYGILLLELMIREKPSDIMFEGDMNLHKFAKM 252
S+I DV+S G +L EL++ + +F GD + + ++
Sbjct: 230 SSI-DVWSAGCVLAELLLGQP----IFPGDSGVDQLVEI 263
>pdb|3GB2|A Chain A, Gsk3beta Inhibitor Complex
Length = 353
Score = 38.1 bits (87), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 33/99 (33%), Positives = 51/99 (51%), Gaps = 11/99 (11%)
Query: 157 HCVLKPSNVLLDDDMTA-RVGDFGLARFLPPTRTQTSSIDVKGSIGYIAPE--YGVGNEV 213
H +KP N+LLD D ++ DFG A+ L S I S Y APE +G +
Sbjct: 149 HRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXI---CSRYYRAPELIFGATDYT 205
Query: 214 STIGDVYSYGILLLELMIREKPSDIMFEGDMNLHKFAKM 252
S+I DV+S G +L EL++ + +F GD + + ++
Sbjct: 206 SSI-DVWSAGCVLAELLLGQP----IFPGDSGVDQLVEI 239
>pdb|1O9U|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide
Length = 350
Score = 38.1 bits (87), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 33/99 (33%), Positives = 51/99 (51%), Gaps = 11/99 (11%)
Query: 157 HCVLKPSNVLLDDDMTA-RVGDFGLARFLPPTRTQTSSIDVKGSIGYIAPE--YGVGNEV 213
H +KP N+LLD D ++ DFG A+ L S I S Y APE +G +
Sbjct: 145 HRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXI---CSRYYRAPELIFGATDYT 201
Query: 214 STIGDVYSYGILLLELMIREKPSDIMFEGDMNLHKFAKM 252
S+I DV+S G +L EL++ + +F GD + + ++
Sbjct: 202 SSI-DVWSAGCVLAELLLGQP----IFPGDSGVDQLVEI 235
>pdb|2WOT|A Chain A, Alk5 In Complex With 4-((5,6-Dimethyl-2-(2-Pyridyl)-3-
Pyridyl)oxy)-N-(3,4,5-Trimethoxyphenyl)pyridin-2-Amine
pdb|2WOU|A Chain A, Alk5 In Complex With
4-((4-((2,6-Dimethyl-3-Pyridyl)oxy)-2-
Pyridyl)amino)benzenesulfonamide
Length = 306
Score = 38.1 bits (87), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 32/113 (28%), Positives = 52/113 (46%), Gaps = 19/113 (16%)
Query: 136 IAIDVASALNYLHHDC-----QPVTAHCVLKPSNVLLDDDMTARVGDFGLARFLPPTRTQ 190
+A+ AS L +LH + +P AH LK N+L+ + T + D GLA +
Sbjct: 108 LALSTASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLA---VRHDSA 164
Query: 191 TSSIDVK-----GSIGYIAPEYGVGN------EVSTIGDVYSYGILLLELMIR 232
T +ID+ G+ Y+APE + E D+Y+ G++ E+ R
Sbjct: 165 TDTIDIAPNHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIARR 217
>pdb|1I09|A Chain A, Structure Of Glycogen Synthase Kinase-3 (Gsk3b)
pdb|1I09|B Chain B, Structure Of Glycogen Synthase Kinase-3 (Gsk3b)
pdb|1J1B|A Chain A, Binary Complex Structure Of Human Tau Protein Kinase I
With Amppnp
pdb|1J1B|B Chain B, Binary Complex Structure Of Human Tau Protein Kinase I
With Amppnp
pdb|1J1C|A Chain A, Binary Complex Structure Of Human Tau Protein Kinase I
With Adp
pdb|1J1C|B Chain B, Binary Complex Structure Of Human Tau Protein Kinase I
With Adp
pdb|2JLD|A Chain A, Extremely Tight Binding Of Ruthenium Complex To Glycogen
Synthase Kinase 3
pdb|2JLD|B Chain B, Extremely Tight Binding Of Ruthenium Complex To Glycogen
Synthase Kinase 3
pdb|3M1S|A Chain A, Structure Of Ruthenium Half-Sandwich Complex Bound To
Glycogen Synthase Kinase 3
pdb|3M1S|B Chain B, Structure Of Ruthenium Half-Sandwich Complex Bound To
Glycogen Synthase Kinase 3
pdb|3PUP|A Chain A, Structure Of Glycogen Synthase Kinase 3 Beta (Gsk3b) In
Complex With A Ruthenium Octasporine Ligand (Os1)
pdb|3PUP|B Chain B, Structure Of Glycogen Synthase Kinase 3 Beta (Gsk3b) In
Complex With A Ruthenium Octasporine Ligand (Os1)
Length = 420
Score = 38.1 bits (87), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 33/99 (33%), Positives = 51/99 (51%), Gaps = 11/99 (11%)
Query: 157 HCVLKPSNVLLDDDMTA-RVGDFGLARFLPPTRTQTSSIDVKGSIGYIAPE--YGVGNEV 213
H +KP N+LLD D ++ DFG A+ L S I S Y APE +G +
Sbjct: 179 HRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYI---CSRYYRAPELIFGATDYT 235
Query: 214 STIGDVYSYGILLLELMIREKPSDIMFEGDMNLHKFAKM 252
S+I DV+S G +L EL++ + +F GD + + ++
Sbjct: 236 SSI-DVWSAGCVLAELLLGQP----IFPGDSGVDQLVEI 269
>pdb|3TXO|A Chain A, Pkc Eta Kinase In Complex With A Naphthyridine
Length = 353
Score = 37.7 bits (86), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 47/187 (25%), Positives = 75/187 (40%), Gaps = 24/187 (12%)
Query: 64 IAECKALRNIRHRNLIKVLTACLGVDYQGNDFKALVYEFMHNRSLKEWLYPISKEDETYK 123
+ E + L R+ + L C +Q D V EF++ L + + DE
Sbjct: 71 MTEKRILSLARNHPFLTQLFCC----FQTPDRLFFVMEFVNGGDLMFHIQKSRRFDEARA 126
Query: 124 RPXXXXXXXXXXIAIDVASALNYLHHDCQPVTAHCVLKPSNVLLDDDMTARVGDFGLARF 183
R A ++ SAL +LH + LK NVLLD + ++ DFG+ +
Sbjct: 127 R----------FYAAEIISALMFLHDKG---IIYRDLKLDNVLLDHEGHCKLADFGMCKE 173
Query: 184 LPPTRTQTSSIDVKGSIGYIAPEYGVGNEVSTIGDVYSYGILLLELMIREKP-----SDI 238
T++ G+ YIAPE D ++ G+LL E++ P D
Sbjct: 174 GICNGVTTATF--CGTPDYIAPEILQEMLYGPAVDWWAMGVLLYEMLCGHAPFEAENEDD 231
Query: 239 MFEGDMN 245
+FE +N
Sbjct: 232 LFEAILN 238
>pdb|1PYX|A Chain A, Gsk-3 Beta Complexed With Amp-Pnp
pdb|1PYX|B Chain B, Gsk-3 Beta Complexed With Amp-Pnp
pdb|3DU8|A Chain A, Crystal Structure Of Gsk-3 Beta In Complex With
Nms-869553a
pdb|3DU8|B Chain B, Crystal Structure Of Gsk-3 Beta In Complex With
Nms-869553a
Length = 422
Score = 37.7 bits (86), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 33/99 (33%), Positives = 51/99 (51%), Gaps = 11/99 (11%)
Query: 157 HCVLKPSNVLLDDDMTA-RVGDFGLARFLPPTRTQTSSIDVKGSIGYIAPE--YGVGNEV 213
H +KP N+LLD D ++ DFG A+ L S I S Y APE +G +
Sbjct: 181 HRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYI---CSRYYRAPELIFGATDYT 237
Query: 214 STIGDVYSYGILLLELMIREKPSDIMFEGDMNLHKFAKM 252
S+I DV+S G +L EL++ + +F GD + + ++
Sbjct: 238 SSI-DVWSAGCVLAELLLGQP----IFPGDSGVDQLVEI 271
>pdb|1Q3D|A Chain A, Gsk-3 Beta Complexed With Staurosporine
pdb|1Q3D|B Chain B, Gsk-3 Beta Complexed With Staurosporine
pdb|1Q3W|A Chain A, Gsk-3 Beta Complexed With Alsterpaullone
pdb|1Q3W|B Chain B, Gsk-3 Beta Complexed With Alsterpaullone
pdb|1Q41|A Chain A, Gsk-3 Beta Complexed With Indirubin-3'-Monoxime
pdb|1Q41|B Chain B, Gsk-3 Beta Complexed With Indirubin-3'-Monoxime
pdb|1Q4L|A Chain A, Gsk-3 Beta Complexed With Inhibitor I-5
pdb|1Q4L|B Chain B, Gsk-3 Beta Complexed With Inhibitor I-5
pdb|3Q3B|A Chain A, 6-Amino-4-(Pyrimidin-4-Yl)pyridones: Novel Glycogen
Synthase Kinase-3 Inhibitors
pdb|3Q3B|B Chain B, 6-Amino-4-(Pyrimidin-4-Yl)pyridones: Novel Glycogen
Synthase Kinase-3 Inhibitors
Length = 424
Score = 37.7 bits (86), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 33/99 (33%), Positives = 51/99 (51%), Gaps = 11/99 (11%)
Query: 157 HCVLKPSNVLLDDDMTA-RVGDFGLARFLPPTRTQTSSIDVKGSIGYIAPE--YGVGNEV 213
H +KP N+LLD D ++ DFG A+ L S I S Y APE +G +
Sbjct: 183 HRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYI---CSRYYRAPELIFGATDYT 239
Query: 214 STIGDVYSYGILLLELMIREKPSDIMFEGDMNLHKFAKM 252
S+I DV+S G +L EL++ + +F GD + + ++
Sbjct: 240 SSI-DVWSAGCVLAELLLGQP----IFPGDSGVDQLVEI 273
>pdb|2XS0|A Chain A, Linear Binding Motifs For Jnk And For Calcineurin
Antagonistically Control The Nuclear Shuttling Of Nfat4
Length = 386
Score = 37.7 bits (86), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 29/98 (29%), Positives = 50/98 (51%), Gaps = 11/98 (11%)
Query: 157 HCVLKPSNVLLDDDMTARVGDFGLARFLPPTRTQTSSIDVKGSIG--YIAPEYGVGNEVS 214
H LKPSN+++ D T ++ DFGLAR TS + V + Y APE +G
Sbjct: 151 HRDLKPSNIVVKSDCTLKILDFGLAR-----TAGTSFMMVPFVVTRYYRAPEVILGMGYK 205
Query: 215 TIGDVYSYGILLLELMIREKPSDIMFEGDMNLHKFAKM 252
D++S G ++ E++ ++F G ++ ++ K+
Sbjct: 206 ENVDIWSVGCIMGEMI----KGGVLFPGTDHIDQWNKV 239
>pdb|2O5K|A Chain A, Crystal Structure Of Gsk3beta In Complex With A
Benzoimidazol Inhibitor
Length = 372
Score = 37.7 bits (86), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 33/99 (33%), Positives = 51/99 (51%), Gaps = 11/99 (11%)
Query: 157 HCVLKPSNVLLDDDMTA-RVGDFGLARFLPPTRTQTSSIDVKGSIGYIAPE--YGVGNEV 213
H +KP N+LLD D ++ DFG A+ L S I S Y APE +G +
Sbjct: 158 HRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYI---CSRYYRAPELIFGATDYT 214
Query: 214 STIGDVYSYGILLLELMIREKPSDIMFEGDMNLHKFAKM 252
S+I DV+S G +L EL++ + +F GD + + ++
Sbjct: 215 SSI-DVWSAGCVLAELLLGQP----IFPGDSGVDQLVEI 248
>pdb|1R0E|A Chain A, Glycogen Synthase Kinase-3 Beta In Complex With
3-Indolyl-4- Arylmaleimide Inhibitor
pdb|1R0E|B Chain B, Glycogen Synthase Kinase-3 Beta In Complex With
3-Indolyl-4- Arylmaleimide Inhibitor
Length = 391
Score = 37.7 bits (86), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 33/99 (33%), Positives = 51/99 (51%), Gaps = 11/99 (11%)
Query: 157 HCVLKPSNVLLDDDMTA-RVGDFGLARFLPPTRTQTSSIDVKGSIGYIAPE--YGVGNEV 213
H +KP N+LLD D ++ DFG A+ L S I S Y APE +G +
Sbjct: 150 HRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYI---CSRYYRAPELIFGATDYT 206
Query: 214 STIGDVYSYGILLLELMIREKPSDIMFEGDMNLHKFAKM 252
S+I DV+S G +L EL++ + +F GD + + ++
Sbjct: 207 SSI-DVWSAGCVLAELLLGQP----IFPGDSGVDQLVEI 240
>pdb|3PFQ|A Chain A, Crystal Structure And Allosteric Activation Of Protein
Kinase C Beta Ii
Length = 674
Score = 37.7 bits (86), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 24/84 (28%), Positives = 41/84 (48%), Gaps = 6/84 (7%)
Query: 160 LKPSNVLLDDDMTARVGDFGLARFLPPTRTQTSSIDVKGSIGYIAPEYGVGNEVSTIGDV 219
LK NV+LD + ++ DFG+ + ++ G+ YIAPE D
Sbjct: 468 LKLDNVMLDSEGHIKIADFGMCK--ENIWDGVTTKXFCGTPDYIAPEIIAYQPYGKSVDW 525
Query: 220 YSYGILLLELMIREKPSDIMFEGD 243
+++G+LL E++ + P FEG+
Sbjct: 526 WAFGVLLYEMLAGQAP----FEGE 545
>pdb|2G01|A Chain A, Pyrazoloquinolones As Novel, Selective Jnk1 Inhibitors
pdb|2G01|B Chain B, Pyrazoloquinolones As Novel, Selective Jnk1 Inhibitors
pdb|2GMX|A Chain A, Selective Aminopyridine-Based C-Jun N-Terminal Kinase
Inhibitors With Cellular Activity
pdb|2GMX|B Chain B, Selective Aminopyridine-Based C-Jun N-Terminal Kinase
Inhibitors With Cellular Activity
pdb|2H96|A Chain A, Discovery Of Potent, Highly Selective, And Orally
Bioavailable Pyridine Carboxamide C-Jun Nh2-Terminal
Kinase Inhibitors
pdb|2H96|B Chain B, Discovery Of Potent, Highly Selective, And Orally
Bioavailable Pyridine Carboxamide C-Jun Nh2-Terminal
Kinase Inhibitors
pdb|2NO3|A Chain A, Novel 4-Anilinopyrimidines As Potent Jnk1 Inhibitors
pdb|2NO3|B Chain B, Novel 4-Anilinopyrimidines As Potent Jnk1 Inhibitors
Length = 370
Score = 37.7 bits (86), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 28/89 (31%), Positives = 46/89 (51%), Gaps = 13/89 (14%)
Query: 157 HCVLKPSNVLLDDDMTARVGDFGLARFLPPTRTQTSSIDVKGSI---GYIAPEYGVGNEV 213
H LKPSN+++ D T ++ DFGLA RT +S ++ + Y APE +G
Sbjct: 149 HRDLKPSNIVVKSDCTLKILDFGLA------RTAGTSFMMEPEVVTRYYRAPEVILGMGY 202
Query: 214 STIGDVYSYGILLLELMIREKPSDIMFEG 242
D++S G ++ E++ + I+F G
Sbjct: 203 KENVDLWSVGCIMGEMVCHK----ILFPG 227
>pdb|3SD0|A Chain A, Identification Of A Glycogen Synthase Kinase-3b Inhibitor
That Attenuates Hyperactivity In Clock Mutant Mice
pdb|3SD0|B Chain B, Identification Of A Glycogen Synthase Kinase-3b Inhibitor
That Attenuates Hyperactivity In Clock Mutant Mice
pdb|4B7T|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide And Leucettine L4
Length = 350
Score = 37.7 bits (86), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 33/99 (33%), Positives = 51/99 (51%), Gaps = 11/99 (11%)
Query: 157 HCVLKPSNVLLDDDMTA-RVGDFGLARFLPPTRTQTSSIDVKGSIGYIAPE--YGVGNEV 213
H +KP N+LLD D ++ DFG A+ L S I S Y APE +G +
Sbjct: 145 HRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYI---CSRYYRAPELIFGATDYT 201
Query: 214 STIGDVYSYGILLLELMIREKPSDIMFEGDMNLHKFAKM 252
S+I DV+S G +L EL++ + +F GD + + ++
Sbjct: 202 SSI-DVWSAGCVLAELLLGQP----IFPGDSGVDQLVEI 235
>pdb|1PY5|A Chain A, Crystal Structure Of Tgf-Beta Receptor I Kinase With
Inhibitor
Length = 326
Score = 37.7 bits (86), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 32/113 (28%), Positives = 52/113 (46%), Gaps = 19/113 (16%)
Query: 136 IAIDVASALNYLHHDC-----QPVTAHCVLKPSNVLLDDDMTARVGDFGLARFLPPTRTQ 190
+A+ AS L +LH + +P AH LK N+L+ + T + D GLA +
Sbjct: 131 LALSTASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLA---VRHDSA 187
Query: 191 TSSIDVK-----GSIGYIAPEYGVGN------EVSTIGDVYSYGILLLELMIR 232
T +ID+ G+ Y+APE + E D+Y+ G++ E+ R
Sbjct: 188 TDTIDIAPNHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIARR 240
>pdb|1H8F|A Chain A, Glycogen Synthase Kinase 3 Beta.
pdb|1H8F|B Chain B, Glycogen Synthase Kinase 3 Beta
Length = 352
Score = 37.7 bits (86), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 33/99 (33%), Positives = 51/99 (51%), Gaps = 11/99 (11%)
Query: 157 HCVLKPSNVLLDDDMTA-RVGDFGLARFLPPTRTQTSSIDVKGSIGYIAPE--YGVGNEV 213
H +KP N+LLD D ++ DFG A+ L S I S Y APE +G +
Sbjct: 145 HRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYI---CSRYYRAPELIFGATDYT 201
Query: 214 STIGDVYSYGILLLELMIREKPSDIMFEGDMNLHKFAKM 252
S+I DV+S G +L EL++ + +F GD + + ++
Sbjct: 202 SSI-DVWSAGCVLAELLLGQP----IFPGDSGVDQLVEI 235
>pdb|4ACC|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACC|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACD|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACD|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACG|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACG|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACH|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACH|B Chain B, Gsk3b In Complex With Inhibitor
Length = 465
Score = 37.7 bits (86), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 33/99 (33%), Positives = 51/99 (51%), Gaps = 11/99 (11%)
Query: 157 HCVLKPSNVLLDDDMTA-RVGDFGLARFLPPTRTQTSSIDVKGSIGYIAPE--YGVGNEV 213
H +KP N+LLD D ++ DFG A+ L S I S Y APE +G +
Sbjct: 224 HRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYI---CSRYYRAPELIFGATDYT 280
Query: 214 STIGDVYSYGILLLELMIREKPSDIMFEGDMNLHKFAKM 252
S+I DV+S G +L EL++ + +F GD + + ++
Sbjct: 281 SSI-DVWSAGCVLAELLLGQP----IFPGDSGVDQLVEI 314
>pdb|1UV5|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With
6-Bromoindirubin-3'-Oxime
Length = 350
Score = 37.4 bits (85), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 33/99 (33%), Positives = 51/99 (51%), Gaps = 11/99 (11%)
Query: 157 HCVLKPSNVLLDDDMTA-RVGDFGLARFLPPTRTQTSSIDVKGSIGYIAPE--YGVGNEV 213
H +KP N+LLD D ++ DFG A+ L S I S Y APE +G +
Sbjct: 145 HRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYI---CSRYYRAPELIFGATDYT 201
Query: 214 STIGDVYSYGILLLELMIREKPSDIMFEGDMNLHKFAKM 252
S+I DV+S G +L EL++ + +F GD + + ++
Sbjct: 202 SSI-DVWSAGCVLAELLLGQP----IFPGDSGVDQLVEI 235
>pdb|1B6C|B Chain B, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1B6C|D Chain D, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1B6C|F Chain F, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1B6C|H Chain H, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1IAS|A Chain A, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|B Chain B, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|C Chain C, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|D Chain D, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|E Chain E, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|3FAA|A Chain A, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|B Chain B, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|C Chain C, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|D Chain D, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|E Chain E, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3KCF|A Chain A, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|B Chain B, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|C Chain C, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|D Chain D, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|E Chain E, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|2X7O|A Chain A, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|B Chain B, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|C Chain C, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|D Chain D, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|E Chain E, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
Length = 342
Score = 37.4 bits (85), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 32/113 (28%), Positives = 52/113 (46%), Gaps = 19/113 (16%)
Query: 136 IAIDVASALNYLHHDC-----QPVTAHCVLKPSNVLLDDDMTARVGDFGLARFLPPTRTQ 190
+A+ AS L +LH + +P AH LK N+L+ + T + D GLA +
Sbjct: 144 LALSTASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLA---VRHDSA 200
Query: 191 TSSIDVK-----GSIGYIAPEYGVGN------EVSTIGDVYSYGILLLELMIR 232
T +ID+ G+ Y+APE + E D+Y+ G++ E+ R
Sbjct: 201 TDTIDIAPNHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIARR 253
>pdb|2I0E|A Chain A, Structure Of Catalytic Domain Of Human Protein Kinase C
Beta Ii Complexed With A Bisindolylmaleimide Inhibitor
pdb|2I0E|B Chain B, Structure Of Catalytic Domain Of Human Protein Kinase C
Beta Ii Complexed With A Bisindolylmaleimide Inhibitor
Length = 353
Score = 37.4 bits (85), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 24/84 (28%), Positives = 41/84 (48%), Gaps = 6/84 (7%)
Query: 160 LKPSNVLLDDDMTARVGDFGLARFLPPTRTQTSSIDVKGSIGYIAPEYGVGNEVSTIGDV 219
LK NV+LD + ++ DFG+ + ++ G+ YIAPE D
Sbjct: 147 LKLDNVMLDSEGHIKIADFGMCK--ENIWDGVTTKXFCGTPDYIAPEIIAYQPYGKSVDW 204
Query: 220 YSYGILLLELMIREKPSDIMFEGD 243
+++G+LL E++ + P FEG+
Sbjct: 205 WAFGVLLYEMLAGQAP----FEGE 224
>pdb|3QAM|E Chain E, Crystal Structure Of Glu208ala Mutant Of Catalytic Subunit
Of Camp- Dependent Protein Kinase
Length = 350
Score = 37.4 bits (85), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 29/119 (24%), Positives = 54/119 (45%), Gaps = 18/119 (15%)
Query: 160 LKPSNVLLDDDMTARVGDFGLARFLPPTRTQTSSIDVKGSIGYIAPEYGVGNEVSTIGDV 219
LKP N+L+D +V DFG A+ R + + + G+ Y+AP + + D
Sbjct: 167 LKPENLLIDQQGYIQVTDFGFAK-----RVKGRTWXLCGTPEYLAPAIILSKGYNKAVDW 221
Query: 220 YSYGILLLELMIREKPSDIMFEGDMNLHKFAKMA---------LSNHVKDIVDSILLND 269
++ G+L+ E+ P F D + + K+ S+ +KD++ ++L D
Sbjct: 222 WALGVLIYEMAAGYPP----FFADQPIQIYEKIVSGKVRFPSHFSSDLKDLLRNLLQVD 276
>pdb|4GT4|A Chain A, Structure Of Unliganded, Inactive Ror2 Kinase Domain
pdb|4GT4|B Chain B, Structure Of Unliganded, Inactive Ror2 Kinase Domain
Length = 308
Score = 37.4 bits (85), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 26/93 (27%), Positives = 44/93 (47%), Gaps = 7/93 (7%)
Query: 140 VASALNYL--HHDCQPVTAHCVLKPSNVLLDDDMTARVGDFGLARFLPPTRTQTSSIDVK 197
+A+ + YL HH H L NVL+ D + ++ D GL R + +
Sbjct: 154 IAAGMEYLSSHH-----VVHKDLATRNVLVYDKLNVKISDLGLFREVYAADYYKLLGNSL 208
Query: 198 GSIGYIAPEYGVGNEVSTIGDVYSYGILLLELM 230
I ++APE + + S D++SYG++L E+
Sbjct: 209 LPIRWMAPEAIMYGKFSIDSDIWSYGVVLWEVF 241
>pdb|3A60|A Chain A, Crystal Structure Of Unphosphorylated P70s6k1 (Form I)
pdb|3A60|B Chain B, Crystal Structure Of Unphosphorylated P70s6k1 (Form I)
pdb|3A61|A Chain A, Crystal Structure Of Unphosphorylated P70s6k1 (Form Ii)
Length = 327
Score = 37.4 bits (85), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 33/137 (24%), Positives = 65/137 (47%), Gaps = 18/137 (13%)
Query: 139 DVASALNYLHHDCQPVTAHCVLKPSNVLLDDDMTARVGDFGLARFLPPTRTQTSSIDVKG 198
+++ AL +LH Q + LKP N++L+ ++ DFGL + T + G
Sbjct: 129 EISMALGHLH---QKGIIYRDLKPENIMLNHQGHVKLTDFGLCK--ESIHDGTVTHTFCG 183
Query: 199 SIGYIAPEYGVGNEVSTIGDVYSYGILLLELMI---------REKPSDIMFEGDMNLHKF 249
+I Y+APE + + + D +S G L+ +++ R+K D + + +NL +
Sbjct: 184 TIEYMAPEILMRSGHNRAVDWWSLGALMYDMLTGAPPFTGENRKKTIDKILKCKLNLPPY 243
Query: 250 AKMALSNHVKDIVDSIL 266
L+ +D++ +L
Sbjct: 244 ----LTQEARDLLKKLL 256
>pdb|2JAM|A Chain A, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase I G
pdb|2JAM|B Chain B, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase I G
Length = 304
Score = 37.0 bits (84), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 29/99 (29%), Positives = 45/99 (45%), Gaps = 10/99 (10%)
Query: 140 VASALNYLHHDCQPVTAHCVLKPSNVLL---DDDMTARVGDFGLARFLPPTRTQTSSIDV 196
V SA+ YLH + H LKP N+L +++ + DFGL++ T+
Sbjct: 115 VLSAVKYLHENG---IVHRDLKPENLLYLTPEENSKIMITDFGLSKMEQNGIMSTAC--- 168
Query: 197 KGSIGYIAPEYGVGNEVSTIGDVYSYGILLLELMIREKP 235
G+ GY+APE S D +S G++ L+ P
Sbjct: 169 -GTPGYVAPEVLAQKPYSKAVDCWSIGVITYILLCGYPP 206
>pdb|3ZZW|A Chain A, Crystal Structure Of The Kinase Domain Of Ror2
pdb|3ZZW|B Chain B, Crystal Structure Of The Kinase Domain Of Ror2
Length = 289
Score = 37.0 bits (84), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 26/93 (27%), Positives = 44/93 (47%), Gaps = 7/93 (7%)
Query: 140 VASALNYL--HHDCQPVTAHCVLKPSNVLLDDDMTARVGDFGLARFLPPTRTQTSSIDVK 197
+A+ + YL HH H L NVL+ D + ++ D GL R + +
Sbjct: 137 IAAGMEYLSSHH-----VVHKDLATRNVLVYDKLNVKISDLGLFREVYAADYYKLLGNSL 191
Query: 198 GSIGYIAPEYGVGNEVSTIGDVYSYGILLLELM 230
I ++APE + + S D++SYG++L E+
Sbjct: 192 LPIRWMAPEAIMYGKFSIDSDIWSYGVVLWEVF 224
>pdb|3A62|A Chain A, Crystal Structure Of Phosphorylated P70s6k1
Length = 327
Score = 37.0 bits (84), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 33/137 (24%), Positives = 65/137 (47%), Gaps = 18/137 (13%)
Query: 139 DVASALNYLHHDCQPVTAHCVLKPSNVLLDDDMTARVGDFGLARFLPPTRTQTSSIDVKG 198
+++ AL +LH Q + LKP N++L+ ++ DFGL + T + G
Sbjct: 129 EISMALGHLH---QKGIIYRDLKPENIMLNHQGHVKLTDFGLCK--ESIHDGTVTHXFCG 183
Query: 199 SIGYIAPEYGVGNEVSTIGDVYSYGILLLELMI---------REKPSDIMFEGDMNLHKF 249
+I Y+APE + + + D +S G L+ +++ R+K D + + +NL +
Sbjct: 184 TIEYMAPEILMRSGHNRAVDWWSLGALMYDMLTGAPPFTGENRKKTIDKILKCKLNLPPY 243
Query: 250 AKMALSNHVKDIVDSIL 266
L+ +D++ +L
Sbjct: 244 ----LTQEARDLLKKLL 256
>pdb|3MY0|A Chain A, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|B Chain B, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|C Chain C, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|D Chain D, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|E Chain E, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|F Chain F, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|G Chain G, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|H Chain H, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|I Chain I, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|J Chain J, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|K Chain K, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|L Chain L, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|M Chain M, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|N Chain N, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|O Chain O, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|P Chain P, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|Q Chain Q, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|R Chain R, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|S Chain S, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|T Chain T, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|U Chain U, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|V Chain V, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|W Chain W, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|X Chain X, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
Length = 305
Score = 37.0 bits (84), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 48/211 (22%), Positives = 90/211 (42%), Gaps = 36/211 (17%)
Query: 136 IAIDVASALNYLHHDC-----QPVTAHCVLKPSNVLLDDDMTARVGDFGLARFLPPTRTQ 190
+A+ A L +LH + +P AH K NVL+ ++ + D GLA +Q
Sbjct: 110 LAVSAACGLAHLHVEIFGTQGKPAIAHRDFKSRNVLVKSNLQCCIADLGLAVM----HSQ 165
Query: 191 TSS-IDVK-----GSIGYIAPEYGVGNEVST-------IGDVYSYGILLLELMIREKPSD 237
S +D+ G+ Y+APE + ++ T D++++G++L E+ R +
Sbjct: 166 GSDYLDIGNNPRVGTKRYMAPEV-LDEQIRTDCFESYKWTDIWAFGLVLWEIARRTIVNG 224
Query: 238 IMFEGDMNLHKFAKMALSNHVKDIVDSILLNDDEKLVVRGDQKQTQAKINIIRECVIS-M 296
I+ + + D+V + +D K VV DQ+ + + V+S +
Sbjct: 225 IVEDYRPPFY------------DVVPNDPSFEDMKKVVCVDQQTPTIPNRLAADPVLSGL 272
Query: 297 VRIGVACSMESPQDRMKMTNVVHELQSIKNT 327
++ C +P R+ + LQ I N+
Sbjct: 273 AQMMRECWYPNPSARLTALRIKKTLQKISNS 303
>pdb|4AF3|A Chain A, Human Aurora B Kinase In Complex With Incenp And Vx-680
Length = 292
Score = 37.0 bits (84), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 29/100 (29%), Positives = 46/100 (46%), Gaps = 7/100 (7%)
Query: 136 IAIDVASALNYLHHDCQPVTAHCVLKPSNVLLDDDMTARVGDFGLARFLPPTRTQTSSID 195
I ++A AL Y H H +KP N+LL ++ DFG + P R +T
Sbjct: 128 IMEELADALMYCHGK---KVIHRDIKPENLLLGLKGELKIADFGWSVHAPSLRRKTMC-- 182
Query: 196 VKGSIGYIAPEYGVGNEVSTIGDVYSYGILLLELMIREKP 235
G++ Y+ PE G + D++ G+L EL++ P
Sbjct: 183 --GTLDYLPPEMIEGRMHNEKVDLWCIGVLCYELLVGNPP 220
>pdb|2BUJ|A Chain A, Crystal Structure Of The Human Serine-Threonine Kinase 16
In Complex With Staurosporine
pdb|2BUJ|B Chain B, Crystal Structure Of The Human Serine-Threonine Kinase 16
In Complex With Staurosporine
Length = 317
Score = 37.0 bits (84), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 33/107 (30%), Positives = 48/107 (44%), Gaps = 27/107 (25%)
Query: 156 AHCVLKPSNVLLDDDMTARVGDFGLARFLPPTRTQTSSIDVKGS---------------I 200
AH LKP+N+LL D+ + D G + I V+GS I
Sbjct: 156 AHRDLKPTNILLGDEGQPVLMDLG--------SMNQACIHVEGSRQALTLQDWAAQRCTI 207
Query: 201 GYIAPE-YGVGNE--VSTIGDVYSYGILLLELMIREKPSDIMFE-GD 243
Y APE + V + + DV+S G +L +M E P D++F+ GD
Sbjct: 208 SYRAPELFSVQSHCVIDERTDVWSLGCVLYAMMFGEGPYDMVFQKGD 254
>pdb|4DFL|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A Sulfonamidopyrazine Piperidine Inhibitor
pdb|4DFN|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
An Adamantylpyrazine Inhibitor
Length = 274
Score = 37.0 bits (84), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 27/88 (30%), Positives = 42/88 (47%), Gaps = 16/88 (18%)
Query: 145 NYLHHDCQPVTAHCVLKPSNVLLDDDMTARVGDFGLARFLPP----TRTQTSSIDVKGSI 200
N++H D L NVLL A++ DFGL++ L + QT K +
Sbjct: 127 NFVHRD---------LAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHG---KWPV 174
Query: 201 GYIAPEYGVGNEVSTIGDVYSYGILLLE 228
+ APE + S+ DV+S+G+L+ E
Sbjct: 175 KWYAPECINYYKFSSKSDVWSFGVLMWE 202
>pdb|3SRV|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase (Syk) In
Complex With A Diaminopyrimidine Carboxamide Inhibitor
Length = 277
Score = 37.0 bits (84), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 25/85 (29%), Positives = 40/85 (47%), Gaps = 10/85 (11%)
Query: 145 NYLHHDCQPVTAHCVLKPSNVLLDDDMTARVGDFGLARFLPPTRTQ-TSSIDVKGSIGYI 203
N++H D L NVLL A++ DFGL++ L + K + +
Sbjct: 131 NFVHRD---------LAARNVLLVTQHYAKISDFGLSKALRADENXYKAQTHGKWPVKWY 181
Query: 204 APEYGVGNEVSTIGDVYSYGILLLE 228
APE + S+ DV+S+G+L+ E
Sbjct: 182 APECINYYKFSSKSDVWSFGVLMWE 206
>pdb|3LM0|A Chain A, Crystal Structure Of Human SerineTHREONINE KINASE 17B
(STK17B)
pdb|3LM5|A Chain A, Crystal Structure Of Human SerineTHREONINE KINASE 17B
(STK17B) IN Complex With Quercetin
Length = 327
Score = 37.0 bits (84), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 35/149 (23%), Positives = 64/149 (42%), Gaps = 26/149 (17%)
Query: 140 VASALNYLHHDCQPVTAHCVLKPSNVLLDDDMT---ARVGDFGLARFLPPTRTQTSSIDV 196
+ + YLH Q H LKP N+LL ++ DFG++R + ++
Sbjct: 140 ILEGVYYLH---QNNIVHLDLKPQNILLSSIYPLGDIKIVDFGMSRKIGHA---CELREI 193
Query: 197 KGSIGYIAPEYGVGNEVSTIGDVYSYGILLLELMIREKPSDIMFEGDMNLHKFAKM---- 252
G+ Y+APE + ++T D+++ GI+ L+ P F G+ N + +
Sbjct: 194 MGTPEYLAPEILNYDPITTATDMWNIGIIAYMLLTHTSP----FVGEDNQETYLNISQVN 249
Query: 253 ---------ALSNHVKDIVDSILLNDDEK 272
++S D + S+L+ + EK
Sbjct: 250 VDYSEETFSSVSQLATDFIQSLLVKNPEK 278
>pdb|1XBA|A Chain A, Crystal Structure Of Apo Syk Tyrosine Kinase Domain
pdb|1XBB|A Chain A, Crystal Structure Of The Syk Tyrosine Kinase Domain With
Gleevec
pdb|1XBC|A Chain A, Crystal Structure Of The Syk Tyrosine Kinase Domain With
Staurosporin
pdb|3FQE|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
Ym193306
pdb|3FQH|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A 2-Substituted 7-Azaindole
pdb|3FQH|B Chain B, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A 2-Substituted 7-Azaindole
pdb|3FQS|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
R406
pdb|4FL1|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
pdb|4FYN|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
3-(8-{4-
[ethyl-(2-hydroxy-ethyl)-amino]-phenylamino}-imidazo[1,
2-a]pyrazin-5- Yl)-phenol
pdb|4FYO|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
N-{(s)-1-
[7-(3,4-dimethoxy-phenylamino)-thiazolo[5,
4-d]pyrimidin-5-yl]- Pyrrolidin-3-yl}-terephthalamic
Acid
pdb|4FZ6|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
[6-((s)-2-
Methyl-pyrrolidin-1-yl)-pyridin-2-yl]-(6-phenyl-
imidazo[1,2- B]pyridazin-8-yl)-amine
Length = 291
Score = 37.0 bits (84), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 27/88 (30%), Positives = 42/88 (47%), Gaps = 16/88 (18%)
Query: 145 NYLHHDCQPVTAHCVLKPSNVLLDDDMTARVGDFGLARFLPP----TRTQTSSIDVKGSI 200
N++H D L NVLL A++ DFGL++ L + QT K +
Sbjct: 137 NFVHRD---------LAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHG---KWPV 184
Query: 201 GYIAPEYGVGNEVSTIGDVYSYGILLLE 228
+ APE + S+ DV+S+G+L+ E
Sbjct: 185 KWYAPECINYYKFSSKSDVWSFGVLMWE 212
>pdb|2J51|A Chain A, Crystal Structure Of Human Ste20-Like Kinase Bound To 5-
Amino-3-((4-(Aminosulfonyl)phenyl)amino)-N-(2,6-
Difluorophenyl)-1h-1,2,4-Triazole-1-Carbothioamide
Length = 325
Score = 37.0 bits (84), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 48/187 (25%), Positives = 77/187 (41%), Gaps = 26/187 (13%)
Query: 55 RRQGAFKSFIAECKALRNIRHRNLIKVLTACLGVDYQGNDFKALVYEFMHNRSLKEWLYP 114
+ + + ++ E L + H N++K+L A Y N+ L+ EF ++ +
Sbjct: 73 KSEEELEDYMVEIDILASCDHPNIVKLLDAF----YYENNLWILI-EFCAGGAVDAVMLE 127
Query: 115 ISKEDETYKRPXXXXXXXXXXIAIDVASALNYLHHDCQPVTAHCVLKPSNVLLDDDMTAR 174
+ +RP + ALNYLH + H LK N+L D +
Sbjct: 128 L-------ERPLTESQIQV--VCKQTLDALNYLHDN---KIIHRDLKAGNILFTLDGDIK 175
Query: 175 VGDFGLARFLPPTRTQTSSIDVKGSIGYIAPEYGVGNEVST------IGDVYSYGILLLE 228
+ DFG++ TRT G+ ++APE V E S DV+S GI L+E
Sbjct: 176 LADFGVSA--KNTRTIQRRDSFIGTPYWMAPEV-VMCETSKDRPYDYKADVWSLGITLIE 232
Query: 229 LMIREKP 235
+ E P
Sbjct: 233 MAEIEPP 239
>pdb|4F4P|A Chain A, Syk In Complex With Ligand Lasw836
Length = 273
Score = 37.0 bits (84), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 27/88 (30%), Positives = 42/88 (47%), Gaps = 16/88 (18%)
Query: 145 NYLHHDCQPVTAHCVLKPSNVLLDDDMTARVGDFGLARFLPP----TRTQTSSIDVKGSI 200
N++H D L NVLL A++ DFGL++ L + QT K +
Sbjct: 125 NFVHRD---------LAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHG---KWPV 172
Query: 201 GYIAPEYGVGNEVSTIGDVYSYGILLLE 228
+ APE + S+ DV+S+G+L+ E
Sbjct: 173 KWYAPECINYYKFSSKSDVWSFGVLMWE 200
>pdb|1VZO|A Chain A, The Structure Of The N-Terminal Kinase Domain Of Msk1
Reveals A Novel Autoinhibitory Conformation For A Dual
Kinase Protein
Length = 355
Score = 37.0 bits (84), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 24/78 (30%), Positives = 40/78 (51%), Gaps = 3/78 (3%)
Query: 160 LKPSNVLLDDDMTARVGDFGLARFLPPTRTQTSSIDVKGSIGYIAPEYGVGNEVS--TIG 217
+K N+LLD + + DFGL++ T+ + D G+I Y+AP+ G +
Sbjct: 185 IKLENILLDSNGHVVLTDFGLSKEFVADETE-RAYDFCGTIEYMAPDIVRGGDSGHDKAV 243
Query: 218 DVYSYGILLLELMIREKP 235
D +S G+L+ EL+ P
Sbjct: 244 DWWSLGVLMYELLTGASP 261
>pdb|3SRV|B Chain B, Crystal Structure Of Spleen Tyrosine Kinase (Syk) In
Complex With A Diaminopyrimidine Carboxamide Inhibitor
Length = 277
Score = 36.6 bits (83), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 27/88 (30%), Positives = 42/88 (47%), Gaps = 16/88 (18%)
Query: 145 NYLHHDCQPVTAHCVLKPSNVLLDDDMTARVGDFGLARFLPP----TRTQTSSIDVKGSI 200
N++H D L NVLL A++ DFGL++ L + QT K +
Sbjct: 131 NFVHRD---------LAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHG---KWPV 178
Query: 201 GYIAPEYGVGNEVSTIGDVYSYGILLLE 228
+ APE + S+ DV+S+G+L+ E
Sbjct: 179 KWYAPECINYYKFSSKSDVWSFGVLMWE 206
>pdb|2Y4I|B Chain B, Ksr2-Mek1 Heterodimer
Length = 319
Score = 36.6 bits (83), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 57/236 (24%), Positives = 85/236 (36%), Gaps = 47/236 (19%)
Query: 29 LEILDVSRNMLE-ENLISAGTFG-FSHLRRQG---------------AFKSFIAECKALR 71
L+ D+ LE LI G FG H R G K+F E A R
Sbjct: 25 LQEWDIPFEQLEIGELIGKGRFGQVYHGRWHGEVAIRLIDIERDNEDQLKAFKREVMAYR 84
Query: 72 NIRHRNLIKVLTACLGVDYQGNDFKALVYEFMHNRSLKEWLYPISKEDETYKRPXXXXXX 131
RH N++ + AC+ + A++ R+ LY + ++ +
Sbjct: 85 QTRHENVVLFMGACMSPPHL-----AIITSLCKGRT----LYSVVRDAKI-----VLDVN 130
Query: 132 XXXXIAIDVASALNYLHHDCQPVTAHCVLKPSNVLLDDDMTARVGDFGL---ARFLPPTR 188
IA ++ + YLH H LK NV D+ + DFGL + L R
Sbjct: 131 KTRQIAQEIVKGMGYLHAKG---ILHKDLKSKNVFYDNGKVV-ITDFGLFSISGVLQAGR 186
Query: 189 TQTSSIDVKGSIGYIAPE----YGVGNE-----VSTIGDVYSYGILLLELMIREKP 235
+ G + ++APE E S DV++ G + EL RE P
Sbjct: 187 REDKLRIQNGWLCHLAPEIIRQLSPDTEEDKLPFSKHSDVFALGTIWYELHAREWP 242
>pdb|2F2U|A Chain A, Crystal Structure Of The Rho-Kinase Kinase Domain
pdb|2F2U|B Chain B, Crystal Structure Of The Rho-Kinase Kinase Domain
pdb|2H9V|A Chain A, Structural Basis For Induced-Fit Binding Of Rho-Kinase To
The Inhibitor Y27632
Length = 402
Score = 36.6 bits (83), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 42/187 (22%), Positives = 75/187 (40%), Gaps = 39/187 (20%)
Query: 136 IAIDVASALNYLHHDCQPVTAHCVLKPSNVLLDDDMTARVGDFGLARFLPPTRTQTSSID 195
+A+D ++ +H D +KP N+LLD ++ DFG + T
Sbjct: 185 LALDAIHSMGLIHRD---------VKPDNMLLDKHGHLKLADFGTCMKMDETGMVHCDTA 235
Query: 196 VKGSIGYIAPEY----GVGNEVSTIGDVYSYGILLLELMIREKPSDIMFEGDMNLHKFAK 251
V G+ YI+PE G D +S G+ L E+++ + P F D + ++K
Sbjct: 236 V-GTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLFEMLVGDTP----FYADSLVGTYSK 290
Query: 252 M-------------ALSNHVKDIVDSILLNDDEKLVVRGDQ--------KQTQAKINIIR 290
+ +S H K+++ + L + + +L G + K Q + IR
Sbjct: 291 IMDHKNSLCFPEDAEISKHAKNLICAFLTDREVRLGRNGVEEIKQHPFFKNDQWNWDNIR 350
Query: 291 ECVISMV 297
E +V
Sbjct: 351 ETAAPVV 357
>pdb|3TUB|A Chain A, Crystal Structure Of Syk Kinase Domain With 1-(5-(6,7-
Dimethoxyquinolin-4-Yloxy)pyridin-2-Yl)-3-((1r,2s)-2-
Phenylcyclopropyl)urea
Length = 293
Score = 36.6 bits (83), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 27/88 (30%), Positives = 42/88 (47%), Gaps = 16/88 (18%)
Query: 145 NYLHHDCQPVTAHCVLKPSNVLLDDDMTARVGDFGLARFLPP----TRTQTSSIDVKGSI 200
N++H D L NVLL A++ DFGL++ L + QT K +
Sbjct: 147 NFVHRD---------LAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHG---KWPV 194
Query: 201 GYIAPEYGVGNEVSTIGDVYSYGILLLE 228
+ APE + S+ DV+S+G+L+ E
Sbjct: 195 KWYAPECINYYKFSSKSDVWSFGVLMWE 222
>pdb|3VF8|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Syk Catalytic
Domain With Pyrazolylbenzimidazole Inhibitor 416
pdb|3VF9|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Syk Catalytic
Domain With Thienopyrazolylindole Inhibitor 027
pdb|3TUC|A Chain A, Crystal Structure Of Syk Kinase Domain With
1-Benzyl-N-(5-(6,7-
Dimethoxyquinolin-4-Yloxy)pyridin-2-Yl)-2-Oxo-1,
2-Dihydropyridine-3- Carboxamide
pdb|3TUD|A Chain A, Crystal Structure Of Syk Kinase Domain With
N-(4-Methyl-3-(8-Methyl-7-
Oxo-2-(Phenylamino)-7,8-Dihydropyrido[2,
3-D]pyrimidin-6-Yl)phenyl)-3- (Trifluoromethyl)benzamide
Length = 299
Score = 36.6 bits (83), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 27/88 (30%), Positives = 42/88 (47%), Gaps = 16/88 (18%)
Query: 145 NYLHHDCQPVTAHCVLKPSNVLLDDDMTARVGDFGLARFLPP----TRTQTSSIDVKGSI 200
N++H D L NVLL A++ DFGL++ L + QT K +
Sbjct: 147 NFVHRD---------LAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHG---KWPV 194
Query: 201 GYIAPEYGVGNEVSTIGDVYSYGILLLE 228
+ APE + S+ DV+S+G+L+ E
Sbjct: 195 KWYAPECINYYKFSSKSDVWSFGVLMWE 222
>pdb|2OZO|A Chain A, Autoinhibited Intact Human Zap-70
Length = 613
Score = 36.6 bits (83), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 28/85 (32%), Positives = 43/85 (50%), Gaps = 2/85 (2%)
Query: 157 HCVLKPSNVLLDDDMTARVGDFGLARFLPPTRT-QTSSIDVKGSIGYIAPEYGVGNEVST 215
H L NVLL + A++ DFGL++ L + T+ K + + APE + S+
Sbjct: 459 HRNLAARNVLLVNRHYAKISDFGLSKALGADDSYYTARSAGKWPLKWYAPECINFRKFSS 518
Query: 216 IGDVYSYGILLLE-LMIREKPSDIM 239
DV+SYG+ + E L +KP M
Sbjct: 519 RSDVWSYGVTMWEALSYGQKPYKKM 543
>pdb|3EMG|A Chain A, Discovery And Sar Of Novel 4-Thiazolyl-2-
Phenylaminopyrimidines As Potent Inhibitors Of Spleen
Tyrosine Kinase (Syk)
Length = 291
Score = 36.6 bits (83), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 25/85 (29%), Positives = 40/85 (47%), Gaps = 10/85 (11%)
Query: 145 NYLHHDCQPVTAHCVLKPSNVLLDDDMTARVGDFGLARFLPPTRT-QTSSIDVKGSIGYI 203
N++H D L NVLL A++ DFGL++ L + K + +
Sbjct: 145 NFVHRD---------LAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWY 195
Query: 204 APEYGVGNEVSTIGDVYSYGILLLE 228
APE + S+ DV+S+G+L+ E
Sbjct: 196 APECINYYKFSSKSDVWSFGVLMWE 220
>pdb|4DYM|A Chain A, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With The Imidazo[1,2-B]pyridazine Inhibitor K00135
Length = 301
Score = 36.6 bits (83), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 32/115 (27%), Positives = 55/115 (47%), Gaps = 23/115 (20%)
Query: 136 IAIDVASALNYLHHDC-----QPVTAHCVLKPSNVLLDDDMTARVGDFGLARFLPPTRTQ 190
I + +AS L +LH + +P AH LK N+L+ + + D GLA +
Sbjct: 110 IVLSIASGLAHLHIEIFGTQGKPAIAHRDLKSKNILVKKNGQCCIADLGLAVMHSQS--- 166
Query: 191 TSSIDVK-----GSIGYIAPEYGVGNEVSTIG--------DVYSYGILLLELMIR 232
T+ +DV G+ Y+APE V +E + D++++G++L E+ R
Sbjct: 167 TNQLDVGNNPRVGTKRYMAPE--VLDETIQVDCFDSYKRVDIWAFGLVLWEVARR 219
>pdb|3MTF|A Chain A, Crystal Structure Of The Acvr1 Kinase In Complex With A 2-
Aminopyridine Inhibitor
pdb|3MTF|B Chain B, Crystal Structure Of The Acvr1 Kinase In Complex With A 2-
Aminopyridine Inhibitor
pdb|3OOM|A Chain A, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With The Imidazo[1,2-B]pyridazine Inhibitor K00507
pdb|3Q4U|A Chain A, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
pdb|3Q4U|B Chain B, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
pdb|3Q4U|C Chain C, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
pdb|3Q4U|D Chain D, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
Length = 301
Score = 36.6 bits (83), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 32/115 (27%), Positives = 55/115 (47%), Gaps = 23/115 (20%)
Query: 136 IAIDVASALNYLHHDC-----QPVTAHCVLKPSNVLLDDDMTARVGDFGLARFLPPTRTQ 190
I + +AS L +LH + +P AH LK N+L+ + + D GLA +
Sbjct: 110 IVLSIASGLAHLHIEIFGTQGKPAIAHRDLKSKNILVKKNGQCCIADLGLAVMHSQS--- 166
Query: 191 TSSIDVK-----GSIGYIAPEYGVGNEVSTIG--------DVYSYGILLLELMIR 232
T+ +DV G+ Y+APE V +E + D++++G++L E+ R
Sbjct: 167 TNQLDVGNNPRVGTKRYMAPE--VLDETIQVDCFDSYKRVDIWAFGLVLWEVARR 219
>pdb|4FIE|A Chain A, Full-Length Human Pak4
pdb|4FIE|B Chain B, Full-Length Human Pak4
Length = 423
Score = 36.2 bits (82), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 51/233 (21%), Positives = 95/233 (40%), Gaps = 47/233 (20%)
Query: 54 LRRQGAFKSFIAECKALRNIRHRNLIKVLTACLGVDYQGNDFKALVYEFMHNRSLKEWLY 113
LR+Q + E +R+ +H N++++ + Y D +V EF+ +L + +
Sbjct: 186 LRKQQRRELLFNEVVIMRDYQHENVVEMYNS-----YLVGDELWVVMEFLEGGALTDIVT 240
Query: 114 PISKEDETYKRPXXXXXXXXXXIAIDVASALNYLHHDCQPVTAHCVLKPSNVLLDDDMTA 173
+E + + V AL+ LH H +K ++LL D
Sbjct: 241 HTRMNEEQI-----------AAVCLAVLQALSVLHAQG---VIHRDIKSDSILLTHDGRV 286
Query: 174 RVGDFGLARFLPPTRTQTSSIDVKGSIGYIAPEY----GVGNEVSTIGDVYSYGILLLEL 229
++ DFG + ++ + G+ ++APE G EV D++S GI+++E+
Sbjct: 287 KLSDFGFCAQV--SKEVPRRKXLVGTPYWMAPELISRLPYGPEV----DIWSLGIMVIEM 340
Query: 230 MIREKP-------------SDIMFEGDMNLHKFAKMALSNHVKDIVDSILLND 269
+ E P D + NLHK +S +K +D +L+ D
Sbjct: 341 VDGEPPYFNEPPLKAMKMIRDNLPPRLKNLHK-----VSPSLKGFLDRLLVRD 388
>pdb|1RDQ|E Chain E, Hydrolysis Of Atp In The Crystal Of Y204a Mutant Of
Camp-Dependent Protein Kinase
Length = 350
Score = 36.2 bits (82), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 29/119 (24%), Positives = 54/119 (45%), Gaps = 18/119 (15%)
Query: 160 LKPSNVLLDDDMTARVGDFGLARFLPPTRTQTSSIDVKGSIGYIAPEYGVGNEVSTIGDV 219
LKP N+L+D +V DFG A+ R + + + G+ +APE + + D
Sbjct: 167 LKPENLLIDQQGYIQVTDFGFAK-----RVKGRTWXLCGTPEALAPEIILSKGYNKAVDW 221
Query: 220 YSYGILLLELMIREKPSDIMFEGDMNLHKFAKMA---------LSNHVKDIVDSILLND 269
++ G+L+ E+ P F D + + K+ S+ +KD++ ++L D
Sbjct: 222 WALGVLIYEMAAGYPP----FFADQPIQIYEKIVSGKVRFPSHFSSDLKDLLRNLLQVD 276
>pdb|4FIF|A Chain A, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIF|B Chain B, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIG|A Chain A, Catalytic Domain Of Human Pak4
pdb|4FIG|B Chain B, Catalytic Domain Of Human Pak4
pdb|4FIH|A Chain A, Catalytic Domain Of Human Pak4 With Qkftglprqw Peptide
pdb|4FII|A Chain A, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIJ|A Chain A, Catalytic Domain Of Human Pak4
Length = 346
Score = 36.2 bits (82), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 51/233 (21%), Positives = 95/233 (40%), Gaps = 47/233 (20%)
Query: 54 LRRQGAFKSFIAECKALRNIRHRNLIKVLTACLGVDYQGNDFKALVYEFMHNRSLKEWLY 113
LR+Q + E +R+ +H N++++ + Y D +V EF+ +L + +
Sbjct: 109 LRKQQRRELLFNEVVIMRDYQHENVVEMYNS-----YLVGDELWVVMEFLEGGALTDIVT 163
Query: 114 PISKEDETYKRPXXXXXXXXXXIAIDVASALNYLHHDCQPVTAHCVLKPSNVLLDDDMTA 173
+E + + V AL+ LH H +K ++LL D
Sbjct: 164 HTRMNEEQI-----------AAVCLAVLQALSVLHAQG---VIHRDIKSDSILLTHDGRV 209
Query: 174 RVGDFGLARFLPPTRTQTSSIDVKGSIGYIAPEY----GVGNEVSTIGDVYSYGILLLEL 229
++ DFG + ++ + G+ ++APE G EV D++S GI+++E+
Sbjct: 210 KLSDFGFCAQV--SKEVPRRKXLVGTPYWMAPELISRLPYGPEV----DIWSLGIMVIEM 263
Query: 230 MIREKP-------------SDIMFEGDMNLHKFAKMALSNHVKDIVDSILLND 269
+ E P D + NLHK +S +K +D +L+ D
Sbjct: 264 VDGEPPYFNEPPLKAMKMIRDNLPPRLKNLHK-----VSPSLKGFLDRLLVRD 311
>pdb|1UNG|A Chain A, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNG|B Chain B, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNH|A Chain A, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNH|B Chain B, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNL|A Chain A, Structural Mechanism For The Inhibition Of Cd5-P25 From
The Roscovitine, Aloisine And Indirubin.
pdb|1UNL|B Chain B, Structural Mechanism For The Inhibition Of Cd5-P25 From
The Roscovitine, Aloisine And Indirubin.
pdb|3O0G|A Chain A, Crystal Structure Of Cdk5:p25 In Complex With An Atp
Analogue
pdb|3O0G|B Chain B, Crystal Structure Of Cdk5:p25 In Complex With An Atp
Analogue
Length = 292
Score = 36.2 bits (82), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 30/101 (29%), Positives = 51/101 (50%), Gaps = 17/101 (16%)
Query: 145 NYLHHDCQPVTAHCVLKPSNVLLDDDMTARVGDFGLAR-FLPPTRTQTSSIDVKGSIGYI 203
N LH D LKP N+L++ + ++ +FGLAR F P R ++ + ++ Y
Sbjct: 121 NVLHRD---------LKPQNLLINRNGELKLANFGLARAFGIPVRCYSAEV---VTLWYR 168
Query: 204 APEYGVGNEV-STIGDVYSYGILLLELMIREKPSDIMFEGD 243
P+ G ++ ST D++S G + EL +P +F G+
Sbjct: 169 PPDVLFGAKLYSTSIDMWSAGCIFAELANAGRP---LFPGN 206
>pdb|2CDZ|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With Cgp74514a
pdb|2J0I|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4
Length = 303
Score = 36.2 bits (82), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 51/233 (21%), Positives = 95/233 (40%), Gaps = 47/233 (20%)
Query: 54 LRRQGAFKSFIAECKALRNIRHRNLIKVLTACLGVDYQGNDFKALVYEFMHNRSLKEWLY 113
LR+Q + E +R+ +H N++++ + Y D +V EF+ +L + +
Sbjct: 66 LRKQQRRELLFNEVVIMRDYQHENVVEMYNS-----YLVGDELWVVMEFLEGGALTDIVT 120
Query: 114 PISKEDETYKRPXXXXXXXXXXIAIDVASALNYLHHDCQPVTAHCVLKPSNVLLDDDMTA 173
+E + + V AL+ LH H +K ++LL D
Sbjct: 121 HTRMNEEQI-----------AAVCLAVLQALSVLHAQG---VIHRDIKSDSILLTHDGRV 166
Query: 174 RVGDFGLARFLPPTRTQTSSIDVKGSIGYIAPEY----GVGNEVSTIGDVYSYGILLLEL 229
++ DFG + ++ + G+ ++APE G EV D++S GI+++E+
Sbjct: 167 KLSDFGFCAQV--SKEVPRRKXLVGTPYWMAPELISRLPYGPEV----DIWSLGIMVIEM 220
Query: 230 MIREKP-------------SDIMFEGDMNLHKFAKMALSNHVKDIVDSILLND 269
+ E P D + NLHK +S +K +D +L+ D
Sbjct: 221 VDGEPPYFNEPPLKAMKMIRDNLPPRLKNLHK-----VSPSLKGFLDRLLVRD 268
>pdb|2JC6|A Chain A, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase 1d
pdb|2JC6|C Chain C, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase 1d
Length = 334
Score = 36.2 bits (82), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 28/99 (28%), Positives = 45/99 (45%), Gaps = 9/99 (9%)
Query: 140 VASALNYLHHDCQPVTAHCVLKPSNVLL---DDDMTARVGDFGLARFLPPTRTQTSSIDV 196
V A+ YLH + H LKP N+L D++ + DFGL++ +++
Sbjct: 129 VLDAVYYLH---RMGIVHRDLKPENLLYYSQDEESKIMISDFGLSKMEGKGDVMSTAC-- 183
Query: 197 KGSIGYIAPEYGVGNEVSTIGDVYSYGILLLELMIREKP 235
G+ GY+APE S D +S G++ L+ P
Sbjct: 184 -GTPGYVAPEVLAQKPYSKAVDCWSIGVIAYILLCGYPP 221
>pdb|2Q0N|A Chain A, Structure Of Human P21 Activating Kinase 4 (Pak4) In
Complex With A Consensus Peptide
Length = 301
Score = 35.8 bits (81), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 51/233 (21%), Positives = 95/233 (40%), Gaps = 47/233 (20%)
Query: 54 LRRQGAFKSFIAECKALRNIRHRNLIKVLTACLGVDYQGNDFKALVYEFMHNRSLKEWLY 113
LR+Q + E +R+ +H N++++ + Y D +V EF+ +L + +
Sbjct: 64 LRKQQRRELLFNEVVIMRDYQHENVVEMYNS-----YLVGDELWVVMEFLEGGALTDIVT 118
Query: 114 PISKEDETYKRPXXXXXXXXXXIAIDVASALNYLHHDCQPVTAHCVLKPSNVLLDDDMTA 173
+E + + V AL+ LH H +K ++LL D
Sbjct: 119 HTRMNEEQI-----------AAVCLAVLQALSVLHAQG---VIHRDIKSDSILLTHDGRV 164
Query: 174 RVGDFGLARFLPPTRTQTSSIDVKGSIGYIAPEY----GVGNEVSTIGDVYSYGILLLEL 229
++ DFG + ++ + G+ ++APE G EV D++S GI+++E+
Sbjct: 165 KLSDFGFCAQV--SKEVPRRKXLVGTPYWMAPELISRLPYGPEV----DIWSLGIMVIEM 218
Query: 230 MIREKP-------------SDIMFEGDMNLHKFAKMALSNHVKDIVDSILLND 269
+ E P D + NLHK +S +K +D +L+ D
Sbjct: 219 VDGEPPYFNEPPLKAMKMIRDNLPPRLKNLHK-----VSPSLKGFLDRLLVRD 266
>pdb|2X4Z|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With Pf-03758309
pdb|4APP|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With (S)-N-(5-(3-Benzyl-1-Methylpiperazine-4-
Carbonyl)-6,6-Dimethyl-1,4,5,6-Tetrahydropyrrolo(3,4-C)
Pyrazol-3-Yl)-3-Phenoxybenzamide
Length = 296
Score = 35.8 bits (81), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 43/186 (23%), Positives = 81/186 (43%), Gaps = 29/186 (15%)
Query: 54 LRRQGAFKSFIAECKALRNIRHRNLIKVLTACLGVDYQGNDFKALVYEFMHNRSLKEWLY 113
LR+Q + E +R+ +H N++++ + Y D +V EF+ +L + +
Sbjct: 59 LRKQQRRELLFNEVVIMRDYQHENVVEMYNS-----YLVGDELWVVMEFLEGGALTDIVT 113
Query: 114 PISKEDETYKRPXXXXXXXXXXIAIDVASALNYLHHDCQPVTAHCVLKPSNVLLDDDMTA 173
+E + + V AL+ LH Q V H +K ++LL D
Sbjct: 114 HTRMNEEQ-----------IAAVCLAVLQALSVLH--AQGVI-HRDIKSDSILLTHDGRV 159
Query: 174 RVGDFGLARFLPPTRTQTSSIDVKGSIGYIAPEY----GVGNEVSTIGDVYSYGILLLEL 229
++ DFG + ++ + G+ ++APE G EV D++S GI+++E+
Sbjct: 160 KLSDFGFCAQV--SKEVPRRKXLVGTPYWMAPELISRLPYGPEV----DIWSLGIMVIEM 213
Query: 230 MIREKP 235
+ E P
Sbjct: 214 VDGEPP 219
>pdb|2IVV|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain Complexed With The Inhibitor Pp1
Length = 314
Score = 35.8 bits (81), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 38/185 (20%), Positives = 74/185 (40%), Gaps = 22/185 (11%)
Query: 60 FKSFIAECKALRNIRHRNLIKVLTACLGVDYQGNDFKALVYEFMHNRSLKEWLYPISKED 119
+ ++E L+ + H ++IK+ AC + L+ E+ SL+ +L K
Sbjct: 70 LRDLLSEFNVLKQVNHPHVIKLYGAC-----SQDGPLLLIVEYAKYGSLRGFLRESRKVG 124
Query: 120 ETY------------KRPXXXXXXXXXXI--AIDVASALNYLHHDCQPVTAHCVLKPSNV 165
Y P I A ++ + YL + H L N+
Sbjct: 125 PGYLGSGGSRNSSSLDHPDERALTMGDLISFAWQISQGMQYL---AEMSLVHRDLAARNI 181
Query: 166 LLDDDMTARVGDFGLARFLPPTRTQTSSIDVKGSIGYIAPEYGVGNEVSTIGDVYSYGIL 225
L+ + ++ DFGL+R + + + + ++A E + +T DV+S+G+L
Sbjct: 182 LVAEGRKMKISDFGLSRDVYEEDSXVKRSQGRIPVKWMAIESLFDHIYTTQSDVWSFGVL 241
Query: 226 LLELM 230
L E++
Sbjct: 242 LWEIV 246
>pdb|2BVA|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4
pdb|2BVA|B Chain B, Crystal Structure Of The Human P21-Activated Kinase 4
Length = 292
Score = 35.8 bits (81), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 41/186 (22%), Positives = 79/186 (42%), Gaps = 29/186 (15%)
Query: 54 LRRQGAFKSFIAECKALRNIRHRNLIKVLTACLGVDYQGNDFKALVYEFMHNRSLKEWLY 113
LR+Q + E +R+ +H N++++ + Y D +V EF+ +L + +
Sbjct: 55 LRKQQRRELLFNEVVIMRDYQHENVVEMYNS-----YLVGDELWVVMEFLEGGALTDIVT 109
Query: 114 PISKEDETYKRPXXXXXXXXXXIAIDVASALNYLHHDCQPVTAHCVLKPSNVLLDDDMTA 173
+E + + V AL+ LH H +K ++LL D
Sbjct: 110 HTRMNEEQI-----------AAVCLAVLQALSVLHAQG---VIHRDIKSDSILLTHDGRV 155
Query: 174 RVGDFGLARFLPPTRTQTSSIDVKGSIGYIAPEY----GVGNEVSTIGDVYSYGILLLEL 229
++ DFG + ++ + G+ ++APE G EV D++S GI+++E+
Sbjct: 156 KLSDFGFCAQV--SKEVPRRKXLVGTPYWMAPELISRLPYGPEV----DIWSLGIMVIEM 209
Query: 230 MIREKP 235
+ E P
Sbjct: 210 VDGEPP 215
>pdb|3H9R|A Chain A, Crystal Structure Of The Kinase Domain Of Type I Activin
Receptor (Acvr1) In Complex With Fkbp12 And Dorsomorphin
Length = 330
Score = 35.8 bits (81), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 32/115 (27%), Positives = 55/115 (47%), Gaps = 23/115 (20%)
Query: 136 IAIDVASALNYLHHDC-----QPVTAHCVLKPSNVLLDDDMTARVGDFGLARFLPPTRTQ 190
I + +AS L +LH + +P AH LK N+L+ + + D GLA +
Sbjct: 139 IVLSIASGLAHLHIEIFGTQGKPAIAHRDLKSKNILVKKNGQCCIADLGLAVMHSQS--- 195
Query: 191 TSSIDVK-----GSIGYIAPEYGVGNEVSTIG--------DVYSYGILLLELMIR 232
T+ +DV G+ Y+APE V +E + D++++G++L E+ R
Sbjct: 196 TNQLDVGNNPRVGTKRYMAPE--VLDETIQVDCFDSYKRVDIWAFGLVLWEVARR 248
>pdb|3COM|A Chain A, Crystal Structure Of Mst1 Kinase
pdb|3COM|B Chain B, Crystal Structure Of Mst1 Kinase
Length = 314
Score = 35.8 bits (81), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 27/93 (29%), Positives = 45/93 (48%), Gaps = 5/93 (5%)
Query: 143 ALNYLHHDCQPVTAHCVLKPSNVLLDDDMTARVGDFGLARFLPPTRTQTSSIDVKGSIGY 202
L YLH + H +K N+LL+ + A++ DFG+A L T V G+ +
Sbjct: 137 GLEYLHFMRK---IHRDIKAGNILLNTEGHAKLADFGVAGQL--TDXMAKRNXVIGTPFW 191
Query: 203 IAPEYGVGNEVSTIGDVYSYGILLLELMIREKP 235
+APE + + D++S GI +E+ + P
Sbjct: 192 MAPEVIQEIGYNCVADIWSLGITAIEMAEGKPP 224
>pdb|2UV2|A Chain A, Crystal Structure Of Human Ste20-Like Kinase Bound To
4-(4-(
5-Cyclopropyl-1h-Pyrazol-3-Ylamino)-Quinazolin-2-
Ylamino)- Phenyl)-Acetonitrile
Length = 287
Score = 35.8 bits (81), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 35/100 (35%), Positives = 47/100 (47%), Gaps = 13/100 (13%)
Query: 143 ALNYLHHDCQPVTAHCVLKPSNVLLDDDMTARVGDFGLARFLPPTRTQTSSID-VKGSIG 201
ALNYLH + H LK N+L D ++ DFG++ TRT D G+
Sbjct: 120 ALNYLHDN---KIIHRDLKAGNILFTLDGDIKLADFGVSA--KNTRTXIQRRDSFIGTPY 174
Query: 202 YIAPEYGVGNEVST------IGDVYSYGILLLELMIREKP 235
++APE V E S DV+S GI L+E+ E P
Sbjct: 175 WMAPEV-VMCETSKDRPYDYKADVWSLGITLIEMAEIEPP 213
>pdb|3DBQ|A Chain A, Crystal Structure Of Ttk Kinase Domain
Length = 343
Score = 35.8 bits (81), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 21/63 (33%), Positives = 30/63 (47%), Gaps = 1/63 (1%)
Query: 144 LNYLHHDCQPVTAHCVLKPSNVLLDDDMTARVGDFGLARFLPPTRTQTSSIDVKGSIGYI 203
L +H Q H LKP+N L+ D M + DFG+A + P T G++ Y+
Sbjct: 118 LEAVHTIHQHGIVHSDLKPANFLIVDGMLKLI-DFGIANQMQPDTTSVVKDSQVGTVNYM 176
Query: 204 APE 206
PE
Sbjct: 177 PPE 179
>pdb|3N9X|A Chain A, Crystal Structure Of Map Kinase From Plasmodium Berghei,
Pb000659.00.0
pdb|3N9X|B Chain B, Crystal Structure Of Map Kinase From Plasmodium Berghei,
Pb000659.00.0
Length = 432
Score = 35.8 bits (81), Expect = 0.042, Method: Compositional matrix adjust.
Identities = 42/177 (23%), Positives = 81/177 (45%), Gaps = 18/177 (10%)
Query: 16 TGSLHIEVGKLKNLEILDVSRNMLEENLISAGTFGFSHLRRQGAFKSFIAECKALRNIRH 75
+G ++ +KN+ + D N + ++LI G++G+ +L + +A K R
Sbjct: 9 SGRENLYFQGIKNVHVPD---NYIIKHLIGRGSYGYVYLAYDKNTEKNVAIKKVNR--MF 63
Query: 76 RNLI---KVLTACLGVDYQGNDFKALVYEFMHNRSLKEW--LYPI-----SKEDETYKRP 125
+LI ++L ++ +D+ +Y+ + L ++ LY + S + +K P
Sbjct: 64 EDLIDCKRILREITILNRLKSDYIIRLYDLIIPDDLLKFDELYIVLEIADSDLKKLFKTP 123
Query: 126 XXXXXXXXXXIAIDVASALNYLHHDCQPVTAHCVLKPSNVLLDDDMTARVGDFGLAR 182
I ++ N++H + H LKP+N LL+ D + +V DFGLAR
Sbjct: 124 IFLTEEHIKTILYNLLLGENFIH---ESGIIHRDLKPANCLLNQDCSVKVCDFGLAR 177
>pdb|3MTL|A Chain A, Crystal Structure Of The Pctaire1 Kinase In Complex With
Ind E804
Length = 324
Score = 35.8 bits (81), Expect = 0.044, Method: Compositional matrix adjust.
Identities = 43/196 (21%), Positives = 85/196 (43%), Gaps = 25/196 (12%)
Query: 36 RNMLEENLISAGTFGFSHLRRQGAFKSFIAECKALRNIRHRNLIKVLTACLGVDYQGNDF 95
++ L +NL++ H +GA + I E L++++H N++ +
Sbjct: 22 KSKLTDNLVALKEIRLEH--EEGAPCTAIREVSLLKDLKHANIVTLHDII-----HTEKS 74
Query: 96 KALVYEFMHNRSLKEWLYPISKEDETYKRPXXXXXXXXXXIAIDVASALNYLHHDCQPVT 155
LV+E++ ++ LK++L + L Y H +
Sbjct: 75 LTLVFEYL-DKDLKQYLDDCGN---------IINMHNVKLFLFQLLRGLAYCH---RQKV 121
Query: 156 AHCVLKPSNVLLDDDMTARVGDFGLARFLP-PTRTQTSSIDVKGSIGYIAPEYGVGN-EV 213
H LKP N+L+++ ++ DFGLAR PT+T + + ++ Y P+ +G+ +
Sbjct: 122 LHRDLKPQNLLINERGELKLADFGLARAKSIPTKTYDNEV---VTLWYRPPDILLGSTDY 178
Query: 214 STIGDVYSYGILLLEL 229
ST D++ G + E+
Sbjct: 179 STQIDMWGVGCIFYEM 194
>pdb|3CEK|A Chain A, Crystal Structure Of Human Dual Specificity Protein Kinase
(ttk)
pdb|3GFW|A Chain A, Crystal Structure Of Human Dual Specificity Protein Kinase
(Ttk) In Complex With A Pyrolo-Pyridin Ligand
Length = 313
Score = 35.8 bits (81), Expect = 0.044, Method: Compositional matrix adjust.
Identities = 21/63 (33%), Positives = 30/63 (47%), Gaps = 1/63 (1%)
Query: 144 LNYLHHDCQPVTAHCVLKPSNVLLDDDMTARVGDFGLARFLPPTRTQTSSIDVKGSIGYI 203
L +H Q H LKP+N L+ D M + DFG+A + P T G++ Y+
Sbjct: 137 LEAVHTIHQHGIVHSDLKPANFLIVDGMLKLI-DFGIANQMQPDTTSVVKDSQVGTVNYM 195
Query: 204 APE 206
PE
Sbjct: 196 PPE 198
>pdb|3GC9|A Chain A, The Structure Of P38beta C119s, C162s In Complex With A
Dihydroquinazolinone Inhibitor
pdb|3GC9|B Chain B, The Structure Of P38beta C119s, C162s In Complex With A
Dihydroquinazolinone Inhibitor
Length = 370
Score = 35.8 bits (81), Expect = 0.044, Method: Compositional matrix adjust.
Identities = 28/95 (29%), Positives = 42/95 (44%), Gaps = 21/95 (22%)
Query: 143 ALNYLHHDCQPVTAHCVLKPSNVLLDDDMTARVGDFGLARFLPPTRTQTSSIDVKGSIGY 202
L Y+H H LKPSNV +++D R+ DFGLAR T GY
Sbjct: 143 GLKYIHSAG---IIHRDLKPSNVAVNEDSELRILDFGLARQADEEMT-----------GY 188
Query: 203 IAPEYGVGNEV-------STIGDVYSYGILLLELM 230
+A + E+ + D++S G ++ EL+
Sbjct: 189 VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELL 223
>pdb|3GP0|A Chain A, Crystal Structure Of Human Mitogen Activated Protein
Kinase 11 (p38 Beta) In Complex With Nilotinib
Length = 348
Score = 35.8 bits (81), Expect = 0.044, Method: Compositional matrix adjust.
Identities = 25/81 (30%), Positives = 38/81 (46%), Gaps = 18/81 (22%)
Query: 157 HCVLKPSNVLLDDDMTARVGDFGLARFLPPTRTQTSSIDVKGSIGYIAPEYGVGNEV--- 213
H LKPSNV +++D R+ DFGLAR T GY+A + E+
Sbjct: 146 HRDLKPSNVAVNEDCELRILDFGLARQADEEMT-----------GYVATRWYRAPEIMLN 194
Query: 214 ----STIGDVYSYGILLLELM 230
+ D++S G ++ EL+
Sbjct: 195 WMHYNQTVDIWSVGCIMAELL 215
>pdb|2IVT|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain
pdb|2IVU|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain Complexed With The Inhibitor Zd6474
pdb|2X2K|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2L|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2M|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2M|B Chain B, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
Length = 314
Score = 35.8 bits (81), Expect = 0.045, Method: Compositional matrix adjust.
Identities = 38/185 (20%), Positives = 74/185 (40%), Gaps = 22/185 (11%)
Query: 60 FKSFIAECKALRNIRHRNLIKVLTACLGVDYQGNDFKALVYEFMHNRSLKEWLYPISKED 119
+ ++E L+ + H ++IK+ AC + L+ E+ SL+ +L K
Sbjct: 70 LRDLLSEFNVLKQVNHPHVIKLYGAC-----SQDGPLLLIVEYAKYGSLRGFLRESRKVG 124
Query: 120 ETY------------KRPXXXXXXXXXXI--AIDVASALNYLHHDCQPVTAHCVLKPSNV 165
Y P I A ++ + YL + H L N+
Sbjct: 125 PGYLGSGGSRNSSSLDHPDERALTMGDLISFAWQISQGMQYL---AEMKLVHRDLAARNI 181
Query: 166 LLDDDMTARVGDFGLARFLPPTRTQTSSIDVKGSIGYIAPEYGVGNEVSTIGDVYSYGIL 225
L+ + ++ DFGL+R + + + + ++A E + +T DV+S+G+L
Sbjct: 182 LVAEGRKMKISDFGLSRDVYEEDSXVKRSQGRIPVKWMAIESLFDHIYTTQSDVWSFGVL 241
Query: 226 LLELM 230
L E++
Sbjct: 242 LWEIV 246
>pdb|3GC8|A Chain A, The Structure Of P38beta C162s In Complex With A
Dihydroquinazolinone
pdb|3GC8|B Chain B, The Structure Of P38beta C162s In Complex With A
Dihydroquinazolinone
Length = 370
Score = 35.8 bits (81), Expect = 0.045, Method: Compositional matrix adjust.
Identities = 25/81 (30%), Positives = 38/81 (46%), Gaps = 18/81 (22%)
Query: 157 HCVLKPSNVLLDDDMTARVGDFGLARFLPPTRTQTSSIDVKGSIGYIAPEYGVGNEV--- 213
H LKPSNV +++D R+ DFGLAR T GY+A + E+
Sbjct: 154 HRDLKPSNVAVNEDSELRILDFGLARQADEEMT-----------GYVATRWYRAPEIMLN 202
Query: 214 ----STIGDVYSYGILLLELM 230
+ D++S G ++ EL+
Sbjct: 203 WMHYNQTVDIWSVGCIMAELL 223
>pdb|4FL3|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
Length = 635
Score = 35.8 bits (81), Expect = 0.046, Method: Compositional matrix adjust.
Identities = 25/85 (29%), Positives = 40/85 (47%), Gaps = 10/85 (11%)
Query: 145 NYLHHDCQPVTAHCVLKPSNVLLDDDMTARVGDFGLARFLPPTRT-QTSSIDVKGSIGYI 203
N++H D L NVLL A++ DFGL++ L + K + +
Sbjct: 489 NFVHRD---------LAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWY 539
Query: 204 APEYGVGNEVSTIGDVYSYGILLLE 228
APE + S+ DV+S+G+L+ E
Sbjct: 540 APECINYYKFSSKSDVWSFGVLMWE 564
>pdb|3VQU|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With 4- [(4-Amino-5-Cyano-6-Ethoxypyridin-2-
Yl)amino]benzamide
Length = 320
Score = 35.8 bits (81), Expect = 0.046, Method: Compositional matrix adjust.
Identities = 21/63 (33%), Positives = 30/63 (47%), Gaps = 1/63 (1%)
Query: 144 LNYLHHDCQPVTAHCVLKPSNVLLDDDMTARVGDFGLARFLPPTRTQTSSIDVKGSIGYI 203
L +H Q H LKP+N L+ D M + DFG+A + P T G++ Y+
Sbjct: 117 LEAVHTIHQHGIVHSDLKPANFLIVDGMLKLI-DFGIANQMQPDTTSVVKDSQVGTVNYM 175
Query: 204 APE 206
PE
Sbjct: 176 PPE 178
>pdb|2X9E|A Chain A, Human Mps1 In Complex With Nms-P715
Length = 317
Score = 35.4 bits (80), Expect = 0.050, Method: Compositional matrix adjust.
Identities = 21/63 (33%), Positives = 30/63 (47%), Gaps = 1/63 (1%)
Query: 144 LNYLHHDCQPVTAHCVLKPSNVLLDDDMTARVGDFGLARFLPPTRTQTSSIDVKGSIGYI 203
L +H Q H LKP+N L+ D M + DFG+A + P T G++ Y+
Sbjct: 121 LEAVHTIHQHGIVHSDLKPANFLIVDGMLKLI-DFGIANQMQPDTTSVVKDSQVGTVNYM 179
Query: 204 APE 206
PE
Sbjct: 180 PPE 182
>pdb|4FL2|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
Length = 636
Score = 35.4 bits (80), Expect = 0.053, Method: Compositional matrix adjust.
Identities = 25/85 (29%), Positives = 40/85 (47%), Gaps = 10/85 (11%)
Query: 145 NYLHHDCQPVTAHCVLKPSNVLLDDDMTARVGDFGLARFLPPTRT-QTSSIDVKGSIGYI 203
N++H D L NVLL A++ DFGL++ L + K + +
Sbjct: 490 NFVHRD---------LAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWY 540
Query: 204 APEYGVGNEVSTIGDVYSYGILLLE 228
APE + S+ DV+S+G+L+ E
Sbjct: 541 APECINYYKFSSKSDVWSFGVLMWE 565
>pdb|2ZMC|A Chain A, Crystal Structure Of Human Mitotic Checkpoint Kinase Mps1
Catalytic Domain Apo Form
Length = 390
Score = 35.4 bits (80), Expect = 0.053, Method: Compositional matrix adjust.
Identities = 21/63 (33%), Positives = 30/63 (47%), Gaps = 1/63 (1%)
Query: 144 LNYLHHDCQPVTAHCVLKPSNVLLDDDMTARVGDFGLARFLPPTRTQTSSIDVKGSIGYI 203
L +H Q H LKP+N L+ D M + DFG+A + P T G++ Y+
Sbjct: 165 LEAVHTIHQHGIVHSDLKPANFLIVDGMLKLI-DFGIANQMQPDTTSVVKDSQVGTVNYM 223
Query: 204 APE 206
PE
Sbjct: 224 PPE 226
>pdb|2ZMD|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain T686a
Mutant In Complex With Sp600125 Inhibitor
Length = 390
Score = 35.4 bits (80), Expect = 0.056, Method: Compositional matrix adjust.
Identities = 21/63 (33%), Positives = 30/63 (47%), Gaps = 1/63 (1%)
Query: 144 LNYLHHDCQPVTAHCVLKPSNVLLDDDMTARVGDFGLARFLPPTRTQTSSIDVKGSIGYI 203
L +H Q H LKP+N L+ D M + DFG+A + P T G++ Y+
Sbjct: 165 LEAVHTIHQHGIVHSDLKPANFLIVDGMLKLI-DFGIANQMQPDTTSVVKDSQVGAVNYM 223
Query: 204 APE 206
PE
Sbjct: 224 PPE 226
>pdb|3HMN|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With Atp
pdb|3HMO|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With The Inhibitor Staurosporine
pdb|3HMP|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With A Quinazolin Ligand Compound 4
Length = 342
Score = 35.4 bits (80), Expect = 0.059, Method: Compositional matrix adjust.
Identities = 21/63 (33%), Positives = 30/63 (47%), Gaps = 1/63 (1%)
Query: 144 LNYLHHDCQPVTAHCVLKPSNVLLDDDMTARVGDFGLARFLPPTRTQTSSIDVKGSIGYI 203
L +H Q H LKP+N L+ D M + DFG+A + P T G++ Y+
Sbjct: 165 LEAVHTIHQHGIVHSDLKPANFLIVDGMLKLI-DFGIANQMQPDTTSVVKDSQVGTVNYM 223
Query: 204 APE 206
PE
Sbjct: 224 PPE 226
>pdb|2IVS|A Chain A, Crystal Structure Of Non-Phosphorylated Ret Tyrosine
Kinase Domain
pdb|2IVS|B Chain B, Crystal Structure Of Non-Phosphorylated Ret Tyrosine
Kinase Domain
Length = 314
Score = 35.4 bits (80), Expect = 0.059, Method: Compositional matrix adjust.
Identities = 38/185 (20%), Positives = 74/185 (40%), Gaps = 22/185 (11%)
Query: 60 FKSFIAECKALRNIRHRNLIKVLTACLGVDYQGNDFKALVYEFMHNRSLKEWLYPISKED 119
+ ++E L+ + H ++IK+ AC + L+ E+ SL+ +L K
Sbjct: 70 LRDLLSEFNVLKQVNHPHVIKLYGAC-----SQDGPLLLIVEYAKYGSLRGFLRESRKVG 124
Query: 120 ETY------------KRPXXXXXXXXXXI--AIDVASALNYLHHDCQPVTAHCVLKPSNV 165
Y P I A ++ + YL + H L N+
Sbjct: 125 PGYLGSGGSRNSSSLDHPDERALTMGDLISFAWQISQGMQYL---AEMKLVHRDLAARNI 181
Query: 166 LLDDDMTARVGDFGLARFLPPTRTQTSSIDVKGSIGYIAPEYGVGNEVSTIGDVYSYGIL 225
L+ + ++ DFGL+R + + + + ++A E + +T DV+S+G+L
Sbjct: 182 LVAEGRKMKISDFGLSRDVYEEDSYVKRSQGRIPVKWMAIESLFDHIYTTQSDVWSFGVL 241
Query: 226 LLELM 230
L E++
Sbjct: 242 LWEIV 246
>pdb|3LLT|A Chain A, Crystal Structure Of Pf14_0431, Kinase Domain
Length = 360
Score = 35.4 bits (80), Expect = 0.060, Method: Compositional matrix adjust.
Identities = 38/117 (32%), Positives = 54/117 (46%), Gaps = 33/117 (28%)
Query: 138 IDVASALNYLHHDCQPVTAHCVLKPSNVLLDDDM-------TARVGDFGLARFLPPTRTQ 190
I++ ALNYL + H LKP N+LLDD RV D + + RT+
Sbjct: 144 IEILKALNYLR---KMSLTHTDLKPENILLDDPYFEKSLITVRRVTD---GKKIQIYRTK 197
Query: 191 TSSI------------DVKGSI----GYIAPE--YGVGNEVSTIGDVYSYGILLLEL 229
++ I D GSI Y APE +G +VS+ D++S+G +L EL
Sbjct: 198 STGIKLIDFGCATFKSDYHGSIINTRQYRAPEVILNLGWDVSS--DMWSFGCVLAEL 252
>pdb|3FZO|A Chain A, Crystal Structure Of Pyk2-Apo, Proline-Rich Tyrosine
Kinase
pdb|3FZP|A Chain A, Crystal Structure Of Pyk2 Complexed With Atpgs
pdb|3FZR|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-431396
pdb|3FZS|A Chain A, Crystal Structure Of Pyk2 Complexed With Birb796
pdb|3FZT|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-4618433
pdb|3H3C|A Chain A, Crystal Structure Of Pyk2 In Complex With Sulfoximine-
Substituted Trifluoromethylpyrimidine Analog
pdb|3ET7|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-2318841
Length = 277
Score = 35.0 bits (79), Expect = 0.061, Method: Compositional matrix adjust.
Identities = 21/97 (21%), Positives = 48/97 (49%), Gaps = 10/97 (10%)
Query: 137 AIDVASALNYLHHDCQPVTAHCV---LKPSNVLLDDDMTARVGDFGLARFLPPTRTQTSS 193
++ + A+ YL + +CV + N+L+ ++GDFGL+R++ +S
Sbjct: 115 SLQICKAMAYLE------SINCVHRDIAVRNILVASPECVKLGDFGLSRYIEDEDYYKAS 168
Query: 194 IDVKGSIGYIAPEYGVGNEVSTIGDVYSYGILLLELM 230
+ + I +++PE +T DV+ + + + E++
Sbjct: 169 V-TRLPIKWMSPESINFRRFTTASDVWMFAVCMWEIL 204
>pdb|3CC6|A Chain A, Crystal Structure Of Kinase Domain Of Protein Tyrosine
Kinase 2 Beta (ptk2b)
Length = 281
Score = 35.0 bits (79), Expect = 0.072, Method: Compositional matrix adjust.
Identities = 21/97 (21%), Positives = 48/97 (49%), Gaps = 10/97 (10%)
Query: 137 AIDVASALNYLHHDCQPVTAHCV---LKPSNVLLDDDMTARVGDFGLARFLPPTRTQTSS 193
++ + A+ YL + +CV + N+L+ ++GDFGL+R++ +S
Sbjct: 119 SLQICKAMAYLE------SINCVHRDIAVRNILVASPECVKLGDFGLSRYIEDEDYYKAS 172
Query: 194 IDVKGSIGYIAPEYGVGNEVSTIGDVYSYGILLLELM 230
+ + I +++PE +T DV+ + + + E++
Sbjct: 173 V-TRLPIKWMSPESINFRRFTTASDVWMFAVCMWEIL 208
>pdb|4H1J|A Chain A, Crystal Structure Of Pyk2 With The Pyrazole 13a
pdb|4H1M|A Chain A, Crystal Structure Of Pyk2 With The Indole 10c
Length = 293
Score = 35.0 bits (79), Expect = 0.077, Method: Compositional matrix adjust.
Identities = 21/97 (21%), Positives = 48/97 (49%), Gaps = 10/97 (10%)
Query: 137 AIDVASALNYLHHDCQPVTAHCV---LKPSNVLLDDDMTARVGDFGLARFLPPTRTQTSS 193
++ + A+ YL + +CV + N+L+ ++GDFGL+R++ +S
Sbjct: 131 SLQICKAMAYLE------SINCVHRDIAVRNILVASPECVKLGDFGLSRYIEDEDYYKAS 184
Query: 194 IDVKGSIGYIAPEYGVGNEVSTIGDVYSYGILLLELM 230
+ + I +++PE +T DV+ + + + E++
Sbjct: 185 V-TRLPIKWMSPESINFRRFTTASDVWMFAVCMWEIL 220
>pdb|2JFM|A Chain A, Crystal Structure Of Human Ste20-Like Kinase (Unliganded
Form)
Length = 325
Score = 35.0 bits (79), Expect = 0.078, Method: Compositional matrix adjust.
Identities = 47/187 (25%), Positives = 76/187 (40%), Gaps = 26/187 (13%)
Query: 55 RRQGAFKSFIAECKALRNIRHRNLIKVLTACLGVDYQGNDFKALVYEFMHNRSLKEWLYP 114
+ + + ++ E L + H N++K+L A Y N+ L+ EF ++ +
Sbjct: 73 KSEEELEDYMVEIDILASCDHPNIVKLLDAF----YYENNLWILI-EFCAGGAVDAVMLE 127
Query: 115 ISKEDETYKRPXXXXXXXXXXIAIDVASALNYLHHDCQPVTAHCVLKPSNVLLDDDMTAR 174
+ +RP + ALNYLH + H LK N+L D +
Sbjct: 128 L-------ERPLTESQIQV--VCKQTLDALNYLHDN---KIIHRDLKAGNILFTLDGDIK 175
Query: 175 VGDFGLARFLPPTRTQTSSIDVKGSIGYIAPEYGVGNEVST------IGDVYSYGILLLE 228
+ DFG++ TR G+ ++APE V E S DV+S GI L+E
Sbjct: 176 LADFGVSA--KNTRXIQRRDSFIGTPYWMAPEV-VMCETSKDRPYDYKADVWSLGITLIE 232
Query: 229 LMIREKP 235
+ E P
Sbjct: 233 MAEIEPP 239
>pdb|4EC8|A Chain A, Structure Of Full Length Cdk9 In Complex With Cyclint And
Drb
pdb|4EC9|A Chain A, Crystal Structure Of Full-Length Cdk9 In Complex With
Cyclin T
Length = 373
Score = 34.7 bits (78), Expect = 0.086, Method: Compositional matrix adjust.
Identities = 40/158 (25%), Positives = 71/158 (44%), Gaps = 26/158 (16%)
Query: 142 SALNYLHHDCQPVTAHCVLKPSNVLLDDDMTARVGDFGLARFLP------PTRTQTSSID 195
+ L Y+H + H +K +NVL+ D ++ DFGLAR P R +
Sbjct: 136 NGLYYIHRN---KILHRDMKAANVLITRDGVLKLADFGLARAFSLAKNSQPNRYXNRVV- 191
Query: 196 VKGSIGYIAPEYGVGN-EVSTIGDVYSYGILLLELMIREKPSDIMFEGDMNLHKFAKMAL 254
++ Y PE +G + D++ G ++ E+ R S IM +G+ H+ A +
Sbjct: 192 ---TLWYRPPELLLGERDYGPPIDLWGAGCIMAEMWTR---SPIM-QGNTEQHQLA--LI 242
Query: 255 SNHVKDIVDSILLNDD-----EKL-VVRGDQKQTQAKI 286
S I + N D EKL +V+G +++ + ++
Sbjct: 243 SQLCGSITPEVWPNVDNYELYEKLELVKGQKRKVKDRL 280
>pdb|2V55|A Chain A, Mechanism Of Multi-site Phosphorylation From A Rock-i:rhoe
Complex Structure
pdb|2V55|C Chain C, Mechanism Of Multi-site Phosphorylation From A Rock-i:rhoe
Complex Structure
Length = 406
Score = 34.7 bits (78), Expect = 0.086, Method: Compositional matrix adjust.
Identities = 26/104 (25%), Positives = 45/104 (43%), Gaps = 14/104 (13%)
Query: 136 IAIDVASALNYLHHDCQPVTAHCVLKPSNVLLDDDMTARVGDFGLARFLPPTRTQTSSID 195
+A+D ++ ++H D +KP N+LLD ++ DFG +
Sbjct: 184 LALDAIHSMGFIHRD---------VKPDNMLLDKSGHLKLADFGTCMKMNKEGMVRCDTA 234
Query: 196 VKGSIGYIAPEY----GVGNEVSTIGDVYSYGILLLELMIREKP 235
V G+ YI+PE G D +S G+ L E+++ + P
Sbjct: 235 V-GTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTP 277
>pdb|3V8S|A Chain A, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|B Chain B, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|C Chain C, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|D Chain D, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3TV7|A Chain A, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|B Chain B, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|C Chain C, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|D Chain D, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TWJ|A Chain A, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|B Chain B, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|C Chain C, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|D Chain D, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
Length = 410
Score = 34.7 bits (78), Expect = 0.090, Method: Compositional matrix adjust.
Identities = 26/104 (25%), Positives = 45/104 (43%), Gaps = 14/104 (13%)
Query: 136 IAIDVASALNYLHHDCQPVTAHCVLKPSNVLLDDDMTARVGDFGLARFLPPTRTQTSSID 195
+A+D ++ ++H D +KP N+LLD ++ DFG +
Sbjct: 179 LALDAIHSMGFIHRD---------VKPDNMLLDKSGHLKLADFGTCMKMNKEGMVRCDTA 229
Query: 196 VKGSIGYIAPEY----GVGNEVSTIGDVYSYGILLLELMIREKP 235
V G+ YI+PE G D +S G+ L E+++ + P
Sbjct: 230 V-GTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTP 272
>pdb|2ESM|A Chain A, Crystal Structure Of Rock 1 Bound To Fasudil
pdb|2ESM|B Chain B, Crystal Structure Of Rock 1 Bound To Fasudil
pdb|2ETK|A Chain A, Crystal Structure Of Rock 1 Bound To Hydroxyfasudil
pdb|2ETK|B Chain B, Crystal Structure Of Rock 1 Bound To Hydroxyfasudil
pdb|2ETR|A Chain A, Crystal Structure Of Rock I Bound To Y-27632
pdb|2ETR|B Chain B, Crystal Structure Of Rock I Bound To Y-27632
pdb|3D9V|A Chain A, Crystal Structure Of Rock I Bound To H-1152p A Di-
Methylated Variant Of Fasudil
pdb|3D9V|B Chain B, Crystal Structure Of Rock I Bound To H-1152p A Di-
Methylated Variant Of Fasudil
pdb|3NCZ|A Chain A, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|B Chain B, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|C Chain C, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|D Chain D, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NDM|A Chain A, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|B Chain B, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|C Chain C, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|D Chain D, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
Length = 415
Score = 34.7 bits (78), Expect = 0.090, Method: Compositional matrix adjust.
Identities = 26/104 (25%), Positives = 45/104 (43%), Gaps = 14/104 (13%)
Query: 136 IAIDVASALNYLHHDCQPVTAHCVLKPSNVLLDDDMTARVGDFGLARFLPPTRTQTSSID 195
+A+D ++ ++H D +KP N+LLD ++ DFG +
Sbjct: 184 LALDAIHSMGFIHRD---------VKPDNMLLDKSGHLKLADFGTCMKMNKEGMVRCDTA 234
Query: 196 VKGSIGYIAPEY----GVGNEVSTIGDVYSYGILLLELMIREKP 235
V G+ YI+PE G D +S G+ L E+++ + P
Sbjct: 235 V-GTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTP 277
>pdb|2AC5|A Chain A, Structure Of Human Mnk2 Kinase Domain Mutant D228g
pdb|2HW7|A Chain A, Crystal Structure Of Mnk2-D228g In Complex With
Staurosporine
Length = 316
Score = 34.7 bits (78), Expect = 0.093, Method: Compositional matrix adjust.
Identities = 35/111 (31%), Positives = 50/111 (45%), Gaps = 18/111 (16%)
Query: 139 DVASALNYLHHDCQPVTAHCVLKPSNVLLDDD---MTARVGDFGLARFL------PPTRT 189
DVASAL++LH+ AH LKP N+L + ++ DFGL + P T
Sbjct: 119 DVASALDFLHNK---GIAHRDLKPENILCEHPNQVSPVKICDFGLGSGIKLNGDCSPIST 175
Query: 190 QTSSIDVKGSIGYIAPEY--GVGNEVSTIG---DVYSYGILLLELMIREKP 235
+ GS Y+APE E S D++S G++L L+ P
Sbjct: 176 -PELLTPCGSAEYMAPEVVEAFSEEASIYDKRCDLWSLGVILYILLSGYPP 225
>pdb|4BCF|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 331
Score = 34.7 bits (78), Expect = 0.095, Method: Compositional matrix adjust.
Identities = 40/158 (25%), Positives = 71/158 (44%), Gaps = 26/158 (16%)
Query: 142 SALNYLHHDCQPVTAHCVLKPSNVLLDDDMTARVGDFGLARFLP------PTRTQTSSID 195
+ L Y+H + H +K +NVL+ D ++ DFGLAR P R +
Sbjct: 136 NGLYYIHRN---KILHRDMKAANVLITRDGVLKLADFGLARAFSLAKNSQPNRYXNRVV- 191
Query: 196 VKGSIGYIAPEYGVGN-EVSTIGDVYSYGILLLELMIREKPSDIMFEGDMNLHKFAKMAL 254
++ Y PE +G + D++ G ++ E+ R S IM +G+ H+ A +
Sbjct: 192 ---TLWYRPPELLLGERDYGPPIDLWGAGCIMAEMWTR---SPIM-QGNTEQHQLA--LI 242
Query: 255 SNHVKDIVDSILLNDD-----EKL-VVRGDQKQTQAKI 286
S I + N D EKL +V+G +++ + ++
Sbjct: 243 SQLCGSITPEVWPNVDNYELYEKLELVKGQKRKVKDRL 280
>pdb|3BLH|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1
pdb|3BLQ|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1 IN COMPLEX WITH
ATP
pdb|3BLR|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1 IN COMPLEX WITH
Flavopiridol
pdb|3MY1|A Chain A, Structure Of Cdk9CYCLINT1 IN COMPLEX WITH DRB
pdb|3LQ5|A Chain A, Structure Of Cdk9CYCLINT IN COMPLEX WITH S-Cr8
pdb|3TN8|A Chain A, Cdk9CYCLIN T IN COMPLEX WITH CAN508
pdb|3TNH|A Chain A, Cdk9CYCLIN T IN COMPLEX WITH CAN508
pdb|3TNI|A Chain A, Structure Of Cdk9CYCLIN T F241L
pdb|4BCH|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCI|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCJ|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 331
Score = 34.7 bits (78), Expect = 0.097, Method: Compositional matrix adjust.
Identities = 40/156 (25%), Positives = 71/156 (45%), Gaps = 23/156 (14%)
Query: 144 LNYLHHDCQPVTAHCVLKPSNVLLDDDMTARVGDFGLARFLP------PTRTQTSSIDVK 197
LN L++ + H +K +NVL+ D ++ DFGLAR P R +
Sbjct: 135 LNGLYYIHRNKILHRDMKAANVLITRDGVLKLADFGLARAFSLAKNSQPNRYXNRVV--- 191
Query: 198 GSIGYIAPEYGVGN-EVSTIGDVYSYGILLLELMIREKPSDIMFEGDMNLHKFAKMALSN 256
++ Y PE +G + D++ G ++ E+ R S IM +G+ H+ A +S
Sbjct: 192 -TLWYRPPELLLGERDYGPPIDLWGAGCIMAEMWTR---SPIM-QGNTEQHQLA--LISQ 244
Query: 257 HVKDIVDSILLNDD-----EKL-VVRGDQKQTQAKI 286
I + N D EKL +V+G +++ + ++
Sbjct: 245 LCGSITPEVWPNVDNYELYEKLELVKGQKRKVKDRL 280
>pdb|2JFL|A Chain A, Crystal Structure Of Human Ste20-Like Kinase (
Diphosphorylated Form) Bound To 5- Amino-3-((4-(
Aminosulfonyl)phenyl)amino)-N-(2,6-
Difluorophenyl)-1h-1,2, 4-Triazole-1-Carbothioamide
Length = 325
Score = 34.7 bits (78), Expect = 0.097, Method: Compositional matrix adjust.
Identities = 47/187 (25%), Positives = 76/187 (40%), Gaps = 26/187 (13%)
Query: 55 RRQGAFKSFIAECKALRNIRHRNLIKVLTACLGVDYQGNDFKALVYEFMHNRSLKEWLYP 114
+ + + ++ E L + H N++K+L A Y N+ L+ EF ++ +
Sbjct: 73 KSEEELEDYMVEIDILASCDHPNIVKLLDAF----YYENNLWILI-EFCAGGAVDAVMLE 127
Query: 115 ISKEDETYKRPXXXXXXXXXXIAIDVASALNYLHHDCQPVTAHCVLKPSNVLLDDDMTAR 174
+ +RP + ALNYLH + H LK N+L D +
Sbjct: 128 L-------ERPLTESQIQV--VCKQTLDALNYLHDN---KIIHRDLKAGNILFTLDGDIK 175
Query: 175 VGDFGLARFLPPTRTQTSSIDVKGSIGYIAPEYGVGNEVST------IGDVYSYGILLLE 228
+ DFG++ TR G+ ++APE V E S DV+S GI L+E
Sbjct: 176 LADFGVSA--KNTRXIQRRDXFIGTPYWMAPEV-VMCETSKDRPYDYKADVWSLGITLIE 232
Query: 229 LMIREKP 235
+ E P
Sbjct: 233 MAEIEPP 239
>pdb|3MI9|A Chain A, Crystal Structure Of Hiv-1 Tat Complexed With Human P-Tefb
pdb|3MIA|A Chain A, Crystal Structure Of Hiv-1 Tat Complexed With Atp-Bound
Human P-Tefb
Length = 351
Score = 34.7 bits (78), Expect = 0.097, Method: Compositional matrix adjust.
Identities = 40/156 (25%), Positives = 71/156 (45%), Gaps = 23/156 (14%)
Query: 144 LNYLHHDCQPVTAHCVLKPSNVLLDDDMTARVGDFGLARFLP------PTRTQTSSIDVK 197
LN L++ + H +K +NVL+ D ++ DFGLAR P R +
Sbjct: 134 LNGLYYIHRNKILHRDMKAANVLITRDGVLKLADFGLARAFSLAKNSQPNRYXNRVV--- 190
Query: 198 GSIGYIAPEYGVGN-EVSTIGDVYSYGILLLELMIREKPSDIMFEGDMNLHKFAKMALSN 256
++ Y PE +G + D++ G ++ E+ R S IM +G+ H+ A +S
Sbjct: 191 -TLWYRPPELLLGERDYGPPIDLWGAGCIMAEMWTR---SPIM-QGNTEQHQLA--LISQ 243
Query: 257 HVKDIVDSILLNDD-----EKL-VVRGDQKQTQAKI 286
I + N D EKL +V+G +++ + ++
Sbjct: 244 LCGSITPEVWPNVDNYELYEKLELVKGQKRKVKDRL 279
>pdb|3D83|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biphenyl
Amide Inhibitor
pdb|3IPH|A Chain A, Crystal Structure Of P38 In Complex With A Biphenylamide
Inhibitor
Length = 360
Score = 34.3 bits (77), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 23/75 (30%), Positives = 37/75 (49%), Gaps = 6/75 (8%)
Query: 157 HCVLKPSNVLLDDDMTARVGDFGLARFLPPTRTQTSSIDVKGSIGYIAPEYGVG-NEVST 215
H LKPSN+ +++D ++ DFGLAR T + Y APE + +
Sbjct: 148 HRDLKPSNLAVNEDXELKILDFGLAR-----HTDDEMTGYVATRWYRAPEIMLNWMHYNQ 202
Query: 216 IGDVYSYGILLLELM 230
D++S G ++ EL+
Sbjct: 203 TVDIWSVGCIMAELL 217
>pdb|2BAL|A Chain A, P38alpha Map Kinase Bound To Pyrazoloamine
pdb|4AA5|A Chain A, P38alpha Map Kinase Bound To Cmpd 33
Length = 365
Score = 34.3 bits (77), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 23/75 (30%), Positives = 37/75 (49%), Gaps = 6/75 (8%)
Query: 157 HCVLKPSNVLLDDDMTARVGDFGLARFLPPTRTQTSSIDVKGSIGYIAPEYGVG-NEVST 215
H LKPSN+ +++D ++ DFGLAR T + Y APE + +
Sbjct: 153 HRDLKPSNLAVNEDXELKILDFGLAR-----HTDDEMTGYVATRWYRAPEIMLNWMHYNQ 207
Query: 216 IGDVYSYGILLLELM 230
D++S G ++ EL+
Sbjct: 208 TVDIWSVGCIMAELL 222
>pdb|2BAQ|A Chain A, P38alpha Bound To Ro3201195
Length = 365
Score = 34.3 bits (77), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 23/75 (30%), Positives = 37/75 (49%), Gaps = 6/75 (8%)
Query: 157 HCVLKPSNVLLDDDMTARVGDFGLARFLPPTRTQTSSIDVKGSIGYIAPEYGVG-NEVST 215
H LKPSN+ +++D ++ DFGLAR T + Y APE + +
Sbjct: 153 HRDLKPSNLAVNEDXELKILDFGLAR-----HTDDEMTGYVATRWYRAPEIMLNWMHYNQ 207
Query: 216 IGDVYSYGILLLELM 230
D++S G ++ EL+
Sbjct: 208 TVDIWSVGCIMAELL 222
>pdb|3E92|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biaryl
Amide Inhibitor
pdb|3E93|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biaryl
Amide Inhibitor
Length = 371
Score = 34.3 bits (77), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 23/75 (30%), Positives = 37/75 (49%), Gaps = 6/75 (8%)
Query: 157 HCVLKPSNVLLDDDMTARVGDFGLARFLPPTRTQTSSIDVKGSIGYIAPEYGVG-NEVST 215
H LKPSN+ +++D ++ DFGLAR T + Y APE + +
Sbjct: 159 HRDLKPSNLAVNEDXELKILDFGLAR-----HTDDEMTGYVATRWYRAPEIMLNWMHYNQ 213
Query: 216 IGDVYSYGILLLELM 230
D++S G ++ EL+
Sbjct: 214 TVDIWSVGCIMAELL 228
>pdb|4E5A|X Chain X, The W197a Mutant Of P38a Map Kinase
Length = 360
Score = 34.3 bits (77), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 23/75 (30%), Positives = 37/75 (49%), Gaps = 6/75 (8%)
Query: 157 HCVLKPSNVLLDDDMTARVGDFGLARFLPPTRTQTSSIDVKGSIGYIAPEYGV-GNEVST 215
H LKPSN+ +++D ++ DFGLAR T + Y APE + +
Sbjct: 148 HRDLKPSNLAVNEDCELKILDFGLAR-----HTDDEMTGYVATRWYRAPEIMLNAMHYNQ 202
Query: 216 IGDVYSYGILLLELM 230
D++S G ++ EL+
Sbjct: 203 TVDIWSVGCIMAELL 217
>pdb|2I6L|A Chain A, Crystal Structure Of Human Mitogen Activated Protein
Kinase 6 (Mapk6)
pdb|2I6L|B Chain B, Crystal Structure Of Human Mitogen Activated Protein
Kinase 6 (Mapk6)
Length = 320
Score = 34.3 bits (77), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 17/45 (37%), Positives = 27/45 (60%), Gaps = 4/45 (8%)
Query: 143 ALNYLHHDCQPVTAHCVLKPSNVLLD-DDMTARVGDFGLARFLPP 186
L Y+H H LKP+N+ ++ +D+ ++GDFGLAR + P
Sbjct: 132 GLKYIH---SANVLHRDLKPANLFINTEDLVLKIGDFGLARIMDP 173
>pdb|2J7T|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
Bound To Su11274
pdb|4AOT|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
(Lok) Bound To Gw830263a
pdb|4AOT|B Chain B, Crystal Structure Of Human Serine Threonine Kinase-10
(Lok) Bound To Gw830263a
pdb|4EQU|A Chain A, Human Stk-10 (Lok) Kinase Domain In Dfg-Out Conformation
With Inhibitor Dsa-7
pdb|4EQU|B Chain B, Human Stk-10 (Lok) Kinase Domain In Dfg-Out Conformation
With Inhibitor Dsa-7
Length = 302
Score = 34.3 bits (77), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 31/100 (31%), Positives = 48/100 (48%), Gaps = 12/100 (12%)
Query: 142 SALNYLHHDCQPVTAHCVLKPSNVLLDDDMTARVGDFGL-ARFLPPTRTQTSSIDVKGSI 200
ALN+LH H LK NVL+ + R+ DFG+ A+ L + + S I G+
Sbjct: 128 EALNFLHSK---RIIHRDLKAGNVLMTLEGDIRLADFGVSAKNLKTLQKRDSFI---GTP 181
Query: 201 GYIAPEYGVGNEVSTI-----GDVYSYGILLLELMIREKP 235
++APE + + D++S GI L+E+ E P
Sbjct: 182 YWMAPEVVMCETMKDTPYDYKADIWSLGITLIEMAQIEPP 221
>pdb|2OZA|B Chain B, Structure Of P38alpha Complex
pdb|3P78|A Chain A, P38 Inhibitor-Bound
pdb|3P79|A Chain A, P38 Inhibitor-Bound
pdb|3P7A|A Chain A, P38 Inhibitor-Bound
pdb|3P7B|A Chain A, P38 Inhibitor-Bound
pdb|3P7C|A Chain A, P38 Inhibitor-Bound
pdb|3P5K|A Chain A, P38 Inhibitor-Bound
Length = 366
Score = 34.3 bits (77), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 23/75 (30%), Positives = 37/75 (49%), Gaps = 6/75 (8%)
Query: 157 HCVLKPSNVLLDDDMTARVGDFGLARFLPPTRTQTSSIDVKGSIGYIAPEYGVG-NEVST 215
H LKPSN+ +++D ++ DFGLAR T + Y APE + +
Sbjct: 154 HRDLKPSNLAVNEDCELKILDFGLAR-----HTDDEMTGYVATRWYRAPEIMLNWMHYNQ 208
Query: 216 IGDVYSYGILLLELM 230
D++S G ++ EL+
Sbjct: 209 TVDIWSVGCIMAELL 223
>pdb|1IAN|A Chain A, Human P38 Map Kinase Inhibitor Complex
pdb|2QD9|A Chain A, P38 Alpha Map Kinase Inhibitor Based On Heterobicyclic
Scaffolds
pdb|2RG5|A Chain A, Phenylalanine Pyrrolotriazine P38 Alpha Map Kinase
Inhibitor Compound 11b
pdb|2RG6|A Chain A, Phenylalanine Pyrrolotriazine P38 Alpha Map Kinase
Inhibitor Compound 11j
pdb|3C5U|A Chain A, P38 Alpha Map Kinase Complexed With A Benzothiazole Based
Inhibitor
pdb|3BV2|A Chain A, Morpholino Pyrrolotriazine P38 Alpha Map Kinase Inhibitor
Compound 30
pdb|3BV3|A Chain A, Morpholino Pyrrolotriazine P38 Alpha Map Kinase Inhibitor
Compound 2
pdb|3BX5|A Chain A, P38 Alpha Map Kinase Complexed With Bms-640994
pdb|3L8X|A Chain A, P38 Alpha Kinase Complexed With A Pyrazolo-Pyrimidine
Based Inhibitor
pdb|3NWW|A Chain A, P38 Alpha Kinase Complexed With A
2-Aminothiazol-5-Yl-Pyrimidine Based Inhibitor
pdb|3MVL|A Chain A, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7k
pdb|3MVL|B Chain B, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7k
pdb|3MVM|A Chain A, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7v
pdb|3MVM|B Chain B, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7v
pdb|3OCG|A Chain A, P38 Alpha Kinase Complexed With A 5-Amino-Pyrazole Based
Inhibitor
pdb|3S4Q|A Chain A, P38 Alpha Kinase Complexed With A Pyrazolo-Triazine Based
Inhibitor
Length = 366
Score = 34.3 bits (77), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 23/75 (30%), Positives = 37/75 (49%), Gaps = 6/75 (8%)
Query: 157 HCVLKPSNVLLDDDMTARVGDFGLARFLPPTRTQTSSIDVKGSIGYIAPEYGVG-NEVST 215
H LKPSN+ +++D ++ DFGLAR T + Y APE + +
Sbjct: 154 HRDLKPSNLAVNEDCELKILDFGLAR-----HTDDEMTGYVATRWYRAPEIMLNWMHYNQ 208
Query: 216 IGDVYSYGILLLELM 230
D++S G ++ EL+
Sbjct: 209 TVDIWSVGCIMAELL 223
>pdb|2VD5|A Chain A, Structure Of Human Myotonic Dystrophy Protein Kinase In
Complex With The Bisindoylmaleide Inhibitor Bim Viii
pdb|2VD5|B Chain B, Structure Of Human Myotonic Dystrophy Protein Kinase In
Complex With The Bisindoylmaleide Inhibitor Bim Viii
Length = 412
Score = 34.3 bits (77), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 41/151 (27%), Positives = 60/151 (39%), Gaps = 18/151 (11%)
Query: 56 RQGAFKSFIAECKALRNIRHRNLIKVLTACLGVDYQGNDFKALVYEFMHNRSLKEWLYPI 115
++G F E L N R + ++ A +Q ++ LV E+ L L +
Sbjct: 101 KRGEVSCFREERDVLVNGDRRWITQLHFA-----FQDENYLYLVMEYYVGGDL---LTLL 152
Query: 116 SKEDETYKRPXXXXXXXXXXIAIDVASALNYLHHDCQPVTAHCVLKPSNVLLDDDMTARV 175
SK E +AID L Y+H D +KP N+LLD R+
Sbjct: 153 SKFGERIPAEMARFYLAEIVMAIDSVHRLGYVHRD---------IKPDNILLDRCGHIRL 203
Query: 176 GDFGLARFLPPTRTQTSSIDVKGSIGYIAPE 206
DFG L T S + V G+ Y++PE
Sbjct: 204 ADFGSCLKLRADGTVRSLVAV-GTPDYLSPE 233
>pdb|2FSO|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a)
Activating Mutant
Length = 367
Score = 33.9 bits (76), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 23/81 (28%), Positives = 38/81 (46%), Gaps = 18/81 (22%)
Query: 157 HCVLKPSNVLLDDDMTARVGDFGLARFLPPTRTQTSSIDVKGSIGYIAPEYGVGNEV--- 213
H LKPSN+ +++D ++ DFGLAR T GY+A + E+
Sbjct: 155 HRDLKPSNLAVNEDCELKILDFGLARHTADEMT-----------GYVATRWYRAPEIMLN 203
Query: 214 ----STIGDVYSYGILLLELM 230
+ D++S G ++ EL+
Sbjct: 204 WMHYNQTVDIWSVGCIMAELL 224
>pdb|2FSL|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a+f327s)
Activating Mutant Form-A
pdb|2FSM|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a+f327s)
Activating Mutant Form-B
Length = 367
Score = 33.9 bits (76), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 23/81 (28%), Positives = 38/81 (46%), Gaps = 18/81 (22%)
Query: 157 HCVLKPSNVLLDDDMTARVGDFGLARFLPPTRTQTSSIDVKGSIGYIAPEYGVGNEV--- 213
H LKPSN+ +++D ++ DFGLAR T GY+A + E+
Sbjct: 155 HRDLKPSNLAVNEDCELKILDFGLARHTADEMT-----------GYVATRWYRAPEIMLN 203
Query: 214 ----STIGDVYSYGILLLELM 230
+ D++S G ++ EL+
Sbjct: 204 WMHYNQTVDIWSVGCIMAELL 224
>pdb|4BC6|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
Bound To Novel Bosutinib Isoform 1, Previously Thought
To Be Bosutinib
Length = 293
Score = 33.9 bits (76), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 31/100 (31%), Positives = 48/100 (48%), Gaps = 12/100 (12%)
Query: 142 SALNYLHHDCQPVTAHCVLKPSNVLLDDDMTARVGDFGL-ARFLPPTRTQTSSIDVKGSI 200
ALN+LH H LK NVL+ + R+ DFG+ A+ L + + S I G+
Sbjct: 120 EALNFLHSK---RIIHRDLKAGNVLMTLEGDIRLADFGVSAKNLKTLQKRDSFI---GTP 173
Query: 201 GYIAPEYGVGNEVSTI-----GDVYSYGILLLELMIREKP 235
++APE + + D++S GI L+E+ E P
Sbjct: 174 YWMAPEVVMCETMKDTPYDYKADIWSLGITLIEMAQIEPP 213
>pdb|2FST|X Chain X, Mitogen Activated Protein Kinase P38alpha (d176a+f327l)
Activating Mutant
Length = 367
Score = 33.9 bits (76), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 23/81 (28%), Positives = 38/81 (46%), Gaps = 18/81 (22%)
Query: 157 HCVLKPSNVLLDDDMTARVGDFGLARFLPPTRTQTSSIDVKGSIGYIAPEYGVGNEV--- 213
H LKPSN+ +++D ++ DFGLAR T GY+A + E+
Sbjct: 155 HRDLKPSNLAVNEDCELKILDFGLARHTADEMT-----------GYVATRWYRAPEIMLN 203
Query: 214 ----STIGDVYSYGILLLELM 230
+ D++S G ++ EL+
Sbjct: 204 WMHYNQTVDIWSVGCIMAELL 224
>pdb|1LEW|A Chain A, Crystal Structure Of Map Kinase P38 Complexed To The
Docking Site On Its Nuclear Substrate Mef2a
pdb|1LEZ|A Chain A, Crystal Structure Of Map Kinase P38 Complexed To The
Docking Site On Its Activator Mkk3b
Length = 360
Score = 33.9 bits (76), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 23/75 (30%), Positives = 37/75 (49%), Gaps = 6/75 (8%)
Query: 157 HCVLKPSNVLLDDDMTARVGDFGLARFLPPTRTQTSSIDVKGSIGYIAPEYGVG-NEVST 215
H LKPSN+ +++D ++ DFGLAR T + Y APE + +
Sbjct: 148 HRDLKPSNLAVNEDCELKILDFGLAR-----HTDDEMTGYVATRWYRAPEIMLNWMHYNQ 202
Query: 216 IGDVYSYGILLLELM 230
D++S G ++ EL+
Sbjct: 203 TVDIWSVGCIMAELL 217
>pdb|3P4K|A Chain A, The Third Conformation Of P38a Map Kinase Observed In
Phosphorylated P38a And In Solution
Length = 370
Score = 33.9 bits (76), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 23/75 (30%), Positives = 37/75 (49%), Gaps = 6/75 (8%)
Query: 157 HCVLKPSNVLLDDDMTARVGDFGLARFLPPTRTQTSSIDVKGSIGYIAPEYGVG-NEVST 215
H LKPSN+ +++D ++ DFGLAR T + Y APE + +
Sbjct: 158 HRDLKPSNLAVNEDCELKILDFGLAR-----HTDDEMTGYVATRWYRAPEIMLNWMHYNQ 212
Query: 216 IGDVYSYGILLLELM 230
D++S G ++ EL+
Sbjct: 213 TVDIWSVGCIMAELL 227
>pdb|1YW2|A Chain A, Mutated Mus Musculus P38 Kinase (Mp38)
Length = 360
Score = 33.9 bits (76), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 23/75 (30%), Positives = 37/75 (49%), Gaps = 6/75 (8%)
Query: 157 HCVLKPSNVLLDDDMTARVGDFGLARFLPPTRTQTSSIDVKGSIGYIAPEYGVG-NEVST 215
H LKPSN+ +++D ++ DFGLAR T + Y APE + +
Sbjct: 148 HRDLKPSNLAVNEDCELKILDFGLAR-----HTDDEMAGFVATRWYRAPEIMLNWMHYNQ 202
Query: 216 IGDVYSYGILLLELM 230
D++S G ++ EL+
Sbjct: 203 TVDIWSVGCIMAELL 217
>pdb|3ODZ|X Chain X, Crystal Structure Of P38alpha Y323r Active Mutant
Length = 360
Score = 33.9 bits (76), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 23/75 (30%), Positives = 37/75 (49%), Gaps = 6/75 (8%)
Query: 157 HCVLKPSNVLLDDDMTARVGDFGLARFLPPTRTQTSSIDVKGSIGYIAPEYGVG-NEVST 215
H LKPSN+ +++D ++ DFGLAR T + Y APE + +
Sbjct: 148 HRDLKPSNLAVNEDCELKILDFGLAR-----HTDDEMTGYVATRWYRAPEIMLNWMHYNQ 202
Query: 216 IGDVYSYGILLLELM 230
D++S G ++ EL+
Sbjct: 203 TVDIWSVGCIMAELL 217
>pdb|3ODY|X Chain X, Crystal Structure Of P38alpha Y323q Active Mutant
Length = 360
Score = 33.9 bits (76), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 23/75 (30%), Positives = 37/75 (49%), Gaps = 6/75 (8%)
Query: 157 HCVLKPSNVLLDDDMTARVGDFGLARFLPPTRTQTSSIDVKGSIGYIAPEYGVG-NEVST 215
H LKPSN+ +++D ++ DFGLAR T + Y APE + +
Sbjct: 148 HRDLKPSNLAVNEDCELKILDFGLAR-----HTDDEMTGYVATRWYRAPEIMLNWMHYNQ 202
Query: 216 IGDVYSYGILLLELM 230
D++S G ++ EL+
Sbjct: 203 TVDIWSVGCIMAELL 217
>pdb|3OEF|X Chain X, Crystal Structure Of Y323f Inactive Mutant Of P38alpha Map
Kinase
Length = 360
Score = 33.9 bits (76), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 23/75 (30%), Positives = 37/75 (49%), Gaps = 6/75 (8%)
Query: 157 HCVLKPSNVLLDDDMTARVGDFGLARFLPPTRTQTSSIDVKGSIGYIAPEYGVG-NEVST 215
H LKPSN+ +++D ++ DFGLAR T + Y APE + +
Sbjct: 148 HRDLKPSNLAVNEDCELKILDFGLAR-----HTDDEMTGYVATRWYRAPEIMLNWMHYNQ 202
Query: 216 IGDVYSYGILLLELM 230
D++S G ++ EL+
Sbjct: 203 TVDIWSVGCIMAELL 217
>pdb|3OD6|X Chain X, Crystal Structure Of P38alpha Y323t Active Mutant
Length = 360
Score = 33.9 bits (76), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 23/75 (30%), Positives = 37/75 (49%), Gaps = 6/75 (8%)
Query: 157 HCVLKPSNVLLDDDMTARVGDFGLARFLPPTRTQTSSIDVKGSIGYIAPEYGVG-NEVST 215
H LKPSN+ +++D ++ DFGLAR T + Y APE + +
Sbjct: 148 HRDLKPSNLAVNEDCELKILDFGLAR-----HTDDEMTGYVATRWYRAPEIMLNWMHYNQ 202
Query: 216 IGDVYSYGILLLELM 230
D++S G ++ EL+
Sbjct: 203 TVDIWSVGCIMAELL 217
>pdb|1DI9|A Chain A, The Structure Of P38 Mitogen-Activated Protein Kinase In
Complex With 4-[3-Methylsulfanylanilino]-6,7-
Dimethoxyquinazoline
pdb|1KV1|A Chain A, P38 Map Kinase In Complex With Inhibitor 1
pdb|1KV2|A Chain A, Human P38 Map Kinase In Complex With Birb 796
pdb|1WBO|A Chain A, Fragment Based P38 Inhibitors
pdb|1W7H|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W82|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W83|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W84|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1ZZ2|A Chain A, Two Classes Of P38alpha Map Kinase Inhibitors Having A
Common Diphenylether Core But Exhibiting Divergent
Binding Modes
pdb|1WBN|A Chain A, Fragment Based P38 Inhibitors
pdb|1WBS|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1WBT|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-based Lead Generation.
pdb|1WBV|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1WBW|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1ZYJ|A Chain A, Human P38 Map Kinase In Complex With Inhibitor 1a
pdb|2ZAZ|A Chain A, Crystal Structure Of P38 In Complex With 4-Anilino
Quinoline Inhibitor
pdb|2ZB0|A Chain A, Crystal Structure Of P38 In Complex With Biphenyl Amide
Inhibitor
pdb|2ZB1|A Chain A, Crystal Structure Of P38 In Complex With Biphenyl Amide
Inhibitor
pdb|3HL7|A Chain A, Crystal Structure Of Human P38alpha Complexed With Sd-0006
pdb|3HLL|A Chain A, Crystal Structure Of Human P38alpha Complexed With
Ph-797804
pdb|3HP2|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Pyridinone Compound
pdb|3HP5|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Pyrimidopyridazinone Compound
pdb|3KF7|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Triazolopyrimidine Compound
pdb|3MGY|A Chain A, Mutagenesis Of P38 Map Kinase Eshtablishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3ROC|A Chain A, Crystal Structure Of Human P38 Alpha Complexed With A
Pyrimidinone Compound
pdb|3RIN|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|4E5B|A Chain A, Structure Of P38a Map Kinase Without Bog
pdb|4E6A|A Chain A, P38a-Pia23 Complex
pdb|4E6C|A Chain A, P38a-perifosine Complex
pdb|4E8A|A Chain A, The Crystal Structure Of P38a Map Kinase In Complex With
Pia24
Length = 360
Score = 33.9 bits (76), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 23/75 (30%), Positives = 37/75 (49%), Gaps = 6/75 (8%)
Query: 157 HCVLKPSNVLLDDDMTARVGDFGLARFLPPTRTQTSSIDVKGSIGYIAPEYGVG-NEVST 215
H LKPSN+ +++D ++ DFGLAR T + Y APE + +
Sbjct: 148 HRDLKPSNLAVNEDCELKILDFGLAR-----HTDDEMTGYVATRWYRAPEIMLNWMHYNQ 202
Query: 216 IGDVYSYGILLLELM 230
D++S G ++ EL+
Sbjct: 203 TVDIWSVGCIMAELL 217
>pdb|2BAJ|A Chain A, P38alpha Bound To Pyrazolourea
pdb|2BAK|A Chain A, P38alpha Map Kinase Bound To Mpaq
pdb|4A9Y|A Chain A, P38alpha Map Kinase Bound To Cmpd 8
pdb|4AA0|A Chain A, P38alpha Map Kinase Bound To Cmpd 2
pdb|4AA4|A Chain A, P38alpha Map Kinase Bound To Cmpd 22
pdb|4AAC|A Chain A, P38alpha Map Kinase Bound To Cmpd 29
Length = 365
Score = 33.9 bits (76), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 23/75 (30%), Positives = 37/75 (49%), Gaps = 6/75 (8%)
Query: 157 HCVLKPSNVLLDDDMTARVGDFGLARFLPPTRTQTSSIDVKGSIGYIAPEYGVG-NEVST 215
H LKPSN+ +++D ++ DFGLAR T + Y APE + +
Sbjct: 153 HRDLKPSNLAVNEDCELKILDFGLAR-----HTDDEMTGYVATRWYRAPEIMLNWMHYNQ 207
Query: 216 IGDVYSYGILLLELM 230
D++S G ++ EL+
Sbjct: 208 TVDIWSVGCIMAELL 222
>pdb|3HRB|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|3MW1|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|2YIS|A Chain A, Triazolopyridine Inhibitors Of P38 Kinase.
pdb|2YIW|A Chain A, Triazolopyridine Inhibitors Of P38 Kinase
Length = 359
Score = 33.9 bits (76), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 23/75 (30%), Positives = 37/75 (49%), Gaps = 6/75 (8%)
Query: 157 HCVLKPSNVLLDDDMTARVGDFGLARFLPPTRTQTSSIDVKGSIGYIAPEYGVG-NEVST 215
H LKPSN+ +++D ++ DFGLAR T + Y APE + +
Sbjct: 147 HRDLKPSNLAVNEDCELKILDFGLAR-----HTDDEMTGYVATRWYRAPEIMLNWMHYNQ 201
Query: 216 IGDVYSYGILLLELM 230
D++S G ++ EL+
Sbjct: 202 TVDIWSVGCIMAELL 216
>pdb|2NPQ|A Chain A, A Novel Lipid Binding Site In The P38 Alpha Map Kinase
Length = 367
Score = 33.9 bits (76), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 23/75 (30%), Positives = 37/75 (49%), Gaps = 6/75 (8%)
Query: 157 HCVLKPSNVLLDDDMTARVGDFGLARFLPPTRTQTSSIDVKGSIGYIAPEYGVG-NEVST 215
H LKPSN+ +++D ++ DFGLAR T + Y APE + +
Sbjct: 155 HRDLKPSNLAVNEDCELKILDFGLAR-----HTDDEMTGYVATRWYRAPEIMLNWMHYNQ 209
Query: 216 IGDVYSYGILLLELM 230
D++S G ++ EL+
Sbjct: 210 TVDIWSVGCIMAELL 224
>pdb|1OVE|A Chain A, The Structure Of P38 Alpha In Complex With A
Dihydroquinolinone
pdb|1R3C|A Chain A, The Structure Of P38alpha C162s Mutant
pdb|2I0H|A Chain A, The Structure Of P38alpha In Complex With An
Arylpyridazinone
pdb|3GC7|A Chain A, The Structure Of P38alpha In Complex With A
Dihydroquinazolinone
pdb|3NEW|A Chain A, P38-Alpha Complexed With Compound 10
Length = 366
Score = 33.9 bits (76), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 23/75 (30%), Positives = 37/75 (49%), Gaps = 6/75 (8%)
Query: 157 HCVLKPSNVLLDDDMTARVGDFGLARFLPPTRTQTSSIDVKGSIGYIAPEYGVG-NEVST 215
H LKPSN+ +++D ++ DFGLAR T + Y APE + +
Sbjct: 154 HRDLKPSNLAVNEDSELKILDFGLAR-----HTDDEMTGYVATRWYRAPEIMLNWMHYNQ 208
Query: 216 IGDVYSYGILLLELM 230
D++S G ++ EL+
Sbjct: 209 TVDIWSVGCIMAELL 223
>pdb|1YWR|A Chain A, Crystal Structure Analysis Of Inactive P38 Kinase Domain
In Complex With A Monocyclic Pyrazolone Inhibitor
Length = 360
Score = 33.9 bits (76), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 23/75 (30%), Positives = 37/75 (49%), Gaps = 6/75 (8%)
Query: 157 HCVLKPSNVLLDDDMTARVGDFGLARFLPPTRTQTSSIDVKGSIGYIAPEYGVG-NEVST 215
H LKPSN+ +++D ++ DFGLAR T + Y APE + +
Sbjct: 148 HRDLKPSNLAVNEDCELKILDFGLAR-----HTDDEMAGFVATRWYRAPEIMLNWMHYNQ 202
Query: 216 IGDVYSYGILLLELM 230
D++S G ++ EL+
Sbjct: 203 TVDIWSVGCIMAELL 217
>pdb|3NNU|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp1376
pdb|3NNV|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp437
pdb|3NNW|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp802
Length = 354
Score = 33.9 bits (76), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 23/75 (30%), Positives = 37/75 (49%), Gaps = 6/75 (8%)
Query: 157 HCVLKPSNVLLDDDMTARVGDFGLARFLPPTRTQTSSIDVKGSIGYIAPEYGVG-NEVST 215
H LKPSN+ +++D ++ DFGLAR T + Y APE + +
Sbjct: 148 HRDLKPSNLAVNEDCELKILDFGLAR-----HTDDEMTGYVATRWYRAPEIMLNWMHYNQ 202
Query: 216 IGDVYSYGILLLELM 230
D++S G ++ EL+
Sbjct: 203 TVDIWSVGCIMAELL 217
>pdb|2LGC|A Chain A, Joint Nmr And X-Ray Refinement Reveals The Structure Of A
Novel Dibenzo[a,D]cycloheptenone InhibitorP38 MAP KINASE
COMPLEX IN Solution
Length = 359
Score = 33.9 bits (76), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 23/75 (30%), Positives = 37/75 (49%), Gaps = 6/75 (8%)
Query: 157 HCVLKPSNVLLDDDMTARVGDFGLARFLPPTRTQTSSIDVKGSIGYIAPEYGVG-NEVST 215
H LKPSN+ +++D ++ DFGLAR T + Y APE + +
Sbjct: 153 HRDLKPSNLAVNEDCELKILDFGLAR-----HTDDEMTGYVATRWYRAPEIMLNWMHYNQ 207
Query: 216 IGDVYSYGILLLELM 230
D++S G ++ EL+
Sbjct: 208 TVDIWSVGCIMAELL 222
>pdb|3OHT|A Chain A, Crystal Structure Of Salmo Salar P38alpha
pdb|3OHT|B Chain B, Crystal Structure Of Salmo Salar P38alpha
Length = 389
Score = 33.9 bits (76), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 23/75 (30%), Positives = 37/75 (49%), Gaps = 6/75 (8%)
Query: 157 HCVLKPSNVLLDDDMTARVGDFGLARFLPPTRTQTSSIDVKGSIGYIAPEYGVG-NEVST 215
H LKPSN+ +++D ++ DFGLAR T + Y APE + +
Sbjct: 177 HRDLKPSNLAVNEDCELKILDFGLAR-----HTDDEMTGYVATRWYRAPEIMLNWMHYNM 231
Query: 216 IGDVYSYGILLLELM 230
D++S G ++ EL+
Sbjct: 232 TVDIWSVGCIMAELL 246
>pdb|1M7Q|A Chain A, Crystal Structure Of P38 Map Kinase In Complex With A
Dihydroquinazolinone Inhibitor
pdb|1OUK|A Chain A, The Structure Of P38 Alpha In Complex With A
Pyridinylimidazole Inhibitor
pdb|1OUY|A Chain A, The Structure Of P38 Alpha In Complex With A
Dihydropyrido- Pyrimidine Inhibitor
pdb|1R39|A Chain A, The Structure Of P38alpha
pdb|1YQJ|A Chain A, Crystal Structure Of P38 Alpha In Complex With A Selective
Pyridazine Inhibitor
pdb|2OKR|A Chain A, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2OKR|D Chain D, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|A Chain A, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|B Chain B, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|1WFC|A Chain A, Structure Of Apo, Unphosphorylated, P38 Mitogen Activated
Protein Kinase P38 (P38 Map Kinase) The Mammalian
Homologue Of The Yeast Hog1 Protein
pdb|3DS6|A Chain A, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|B Chain B, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|C Chain C, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|D Chain D, P38 Complex With A Phthalazine Inhibitor
pdb|3FC1|X Chain X, Crystal Structure Of P38 Kinase Bound To
Pyrimido-Pyridazinone Inhibitor
pdb|3GFE|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridinone Inhibitor
pdb|3ITZ|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridazine Inhibitor
pdb|3LHJ|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridinone Inhibitor.
pdb|3ZYA|A Chain A, Human P38 Map Kinase In Complex With 2-Amino-Phenylamino-
Dibenzosuberone
pdb|3U8W|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Triazolopyridazinone Inhibitor
Length = 366
Score = 33.9 bits (76), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 23/75 (30%), Positives = 37/75 (49%), Gaps = 6/75 (8%)
Query: 157 HCVLKPSNVLLDDDMTARVGDFGLARFLPPTRTQTSSIDVKGSIGYIAPEYGVG-NEVST 215
H LKPSN+ +++D ++ DFGLAR T + Y APE + +
Sbjct: 154 HRDLKPSNLAVNEDCELKILDFGLAR-----HTDDEMTGYVATRWYRAPEIMLNWMHYNQ 208
Query: 216 IGDVYSYGILLLELM 230
D++S G ++ EL+
Sbjct: 209 TVDIWSVGCIMAELL 223
>pdb|2Y8O|A Chain A, Crystal Structure Of Human P38alpha Complexed With A Mapk
Docking Peptide
Length = 362
Score = 33.9 bits (76), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 23/75 (30%), Positives = 37/75 (49%), Gaps = 6/75 (8%)
Query: 157 HCVLKPSNVLLDDDMTARVGDFGLARFLPPTRTQTSSIDVKGSIGYIAPEYGVG-NEVST 215
H LKPSN+ +++D ++ DFGLAR T + Y APE + +
Sbjct: 150 HRDLKPSNLAVNEDSELKILDFGLAR-----HTDDEMTGYVATRWYRAPEIMLNWMHYNQ 204
Query: 216 IGDVYSYGILLLELM 230
D++S G ++ EL+
Sbjct: 205 TVDIWSVGCIMAELL 219
>pdb|4G3D|A Chain A, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|B Chain B, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|D Chain D, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|E Chain E, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
Length = 371
Score = 33.9 bits (76), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 32/108 (29%), Positives = 47/108 (43%), Gaps = 7/108 (6%)
Query: 143 ALNYLHHDCQPVTAHCVLKPSNVLLDDDMT-ARVGDFGLARFLPPTRTQTSSID---VKG 198
L YLH H +K NVLL D + A + DFG A L P S + + G
Sbjct: 197 GLEYLHSR---RILHGDVKADNVLLSSDGSHAALCDFGHAVCLQPDGLGKSLLTGDYIPG 253
Query: 199 SIGYIAPEYGVGNEVSTIGDVYSYGILLLELMIREKPSDIMFEGDMNL 246
+ ++APE +G DV+S ++L ++ P F G + L
Sbjct: 254 TETHMAPEVVLGRSCDAKVDVWSSCCMMLHMLNGCHPWTQFFRGPLCL 301
>pdb|3ZSG|A Chain A, X-Ray Structure Of P38alpha Bound To Tak-715
pdb|3ZSH|A Chain A, X-Ray Structure Of P38alpha Bound To Scio-469
pdb|3ZSI|A Chain A, X-Ray Structure Of P38alpha Bound To Vx-745
pdb|3ZS5|A Chain A, Structural Basis For Kinase Selectivity Of Three Clinical
P38alpha Inhibitors
Length = 362
Score = 33.9 bits (76), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 23/75 (30%), Positives = 37/75 (49%), Gaps = 6/75 (8%)
Query: 157 HCVLKPSNVLLDDDMTARVGDFGLARFLPPTRTQTSSIDVKGSIGYIAPEYGVG-NEVST 215
H LKPSN+ +++D ++ DFGLAR T + Y APE + +
Sbjct: 150 HRDLKPSNLAVNEDCELKILDFGLAR-----HTDDEMTGYVATRWYRAPEIMLNWMHYNQ 204
Query: 216 IGDVYSYGILLLELM 230
D++S G ++ EL+
Sbjct: 205 TVDIWSVGCIMAELL 219
>pdb|2GTM|A Chain A, Mutated Mouse P38 Map Kinase Domain In Complex With
Inhibitor Pg-892579
pdb|2GTN|A Chain A, Mutated Map Kinase P38 (mus Musculus) In Complex With
Inhbitor Pg-951717
Length = 348
Score = 33.9 bits (76), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 23/75 (30%), Positives = 37/75 (49%), Gaps = 6/75 (8%)
Query: 157 HCVLKPSNVLLDDDMTARVGDFGLARFLPPTRTQTSSIDVKGSIGYIAPEYGVG-NEVST 215
H LKPSN+ +++D ++ DFGLAR T + Y APE + +
Sbjct: 144 HRDLKPSNLAVNEDCELKILDFGLAR-----HTDDEMTGYVATRWYRAPEIMLNWMHYNQ 198
Query: 216 IGDVYSYGILLLELM 230
D++S G ++ EL+
Sbjct: 199 TVDIWSVGCIMAELL 213
>pdb|2GHL|A Chain A, Mutant Mus Musculus P38 Kinase Domain In Complex With
Inhibitor Pg-874743
pdb|2GHM|A Chain A, Mutated Map Kinase P38 (Mus Musculus) In Complex With
Inhbitor Pg-895449
Length = 348
Score = 33.9 bits (76), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 23/75 (30%), Positives = 37/75 (49%), Gaps = 6/75 (8%)
Query: 157 HCVLKPSNVLLDDDMTARVGDFGLARFLPPTRTQTSSIDVKGSIGYIAPEYGVG-NEVST 215
H LKPSN+ +++D ++ DFGLAR T + Y APE + +
Sbjct: 144 HRDLKPSNLAVNEDCELKILDFGLAR-----HTDDEMAGFVATRWYRAPEIMLNWMHYNQ 198
Query: 216 IGDVYSYGILLLELM 230
D++S G ++ EL+
Sbjct: 199 TVDIWSVGCIMAELL 213
>pdb|3NNX|A Chain A, Crystal Structure Of Phosphorylated P38 Alpha In Complex
With Dp802
Length = 354
Score = 33.9 bits (76), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 23/75 (30%), Positives = 37/75 (49%), Gaps = 6/75 (8%)
Query: 157 HCVLKPSNVLLDDDMTARVGDFGLARFLPPTRTQTSSIDVKGSIGYIAPEYGVG-NEVST 215
H LKPSN+ +++D ++ DFGLAR T + Y APE + +
Sbjct: 148 HRDLKPSNLAVNEDCELKILDFGLAR-----HTDDEMTGXVATRWYRAPEIMLNWMHYNQ 202
Query: 216 IGDVYSYGILLLELM 230
D++S G ++ EL+
Sbjct: 203 TVDIWSVGCIMAELL 217
>pdb|3S3I|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
Length = 349
Score = 33.9 bits (76), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 23/75 (30%), Positives = 37/75 (49%), Gaps = 6/75 (8%)
Query: 157 HCVLKPSNVLLDDDMTARVGDFGLARFLPPTRTQTSSIDVKGSIGYIAPEYGVG-NEVST 215
H LKPSN+ +++D ++ DFGLAR T + Y APE + +
Sbjct: 145 HRDLKPSNLAVNEDCELKILDFGLAR-----HTDDEMTGYVATRWYRAPEIMLNWMHYNQ 199
Query: 216 IGDVYSYGILLLELM 230
D++S G ++ EL+
Sbjct: 200 TVDIWSVGCIMAELL 214
>pdb|3K3J|A Chain A, P38alpha Bound To Novel Dfg-Out Compound Pf-00416121
Length = 362
Score = 33.9 bits (76), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 23/75 (30%), Positives = 37/75 (49%), Gaps = 6/75 (8%)
Query: 157 HCVLKPSNVLLDDDMTARVGDFGLARFLPPTRTQTSSIDVKGSIGYIAPEYGVG-NEVST 215
H LKPSN+ +++D ++ DFGLAR T + Y APE + +
Sbjct: 150 HRDLKPSNLAVNEDCELKILDFGLAR-----HTDDEMTGYVATRWYRAPEIMLNWMHYNQ 204
Query: 216 IGDVYSYGILLLELM 230
D++S G ++ EL+
Sbjct: 205 TVDIWSVGCIMAELL 219
>pdb|1ZZL|A Chain A, Crystal Structure Of P38 With Triazolopyridine
pdb|2YIX|A Chain A, Triazolopyridine Inhibitors Of P38
Length = 351
Score = 33.9 bits (76), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 23/75 (30%), Positives = 37/75 (49%), Gaps = 6/75 (8%)
Query: 157 HCVLKPSNVLLDDDMTARVGDFGLARFLPPTRTQTSSIDVKGSIGYIAPEYGVG-NEVST 215
H LKPSN+ +++D ++ DFGLAR T + Y APE + +
Sbjct: 145 HRDLKPSNLAVNEDCELKILDFGLAR-----HTDDEMTGYVATRWYRAPEIMLNWMHYNQ 199
Query: 216 IGDVYSYGILLLELM 230
D++S G ++ EL+
Sbjct: 200 TVDIWSVGCIMAELL 214
>pdb|3HEC|A Chain A, P38 In Complex With Imatinib
pdb|3HEG|A Chain A, P38 In Complex With Sorafenib
Length = 348
Score = 33.9 bits (76), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 23/75 (30%), Positives = 37/75 (49%), Gaps = 6/75 (8%)
Query: 157 HCVLKPSNVLLDDDMTARVGDFGLARFLPPTRTQTSSIDVKGSIGYIAPEYGVG-NEVST 215
H LKPSN+ +++D ++ DFGLAR T + Y APE + +
Sbjct: 144 HRDLKPSNLAVNEDCELKILDFGLAR-----HTDDEMTGYVATRWYRAPEIMLNWMHYNQ 198
Query: 216 IGDVYSYGILLLELM 230
D++S G ++ EL+
Sbjct: 199 TVDIWSVGCIMAELL 213
>pdb|3GCU|A Chain A, Human P38 Map Kinase In Complex With Rl48
pdb|3GCU|B Chain B, Human P38 Map Kinase In Complex With Rl48
pdb|3HV4|A Chain A, Human P38 Map Kinase In Complex With Rl51
pdb|3HV4|B Chain B, Human P38 Map Kinase In Complex With Rl51
pdb|3HV5|A Chain A, Human P38 Map Kinase In Complex With Rl24
pdb|3HV5|B Chain B, Human P38 Map Kinase In Complex With Rl24
pdb|3HV6|A Chain A, Human P38 Map Kinase In Complex With Rl39
pdb|3HV7|A Chain A, Human P38 Map Kinase In Complex With Rl38
pdb|3HUC|A Chain A, Human P38 Map Kinase In Complex With Rl40
pdb|3LFA|A Chain A, Human P38 Map Kinase In Complex With Dasatinib
pdb|3QUE|A Chain A, Human P38 Map Kinase In Complex With Skepinone-L
pdb|3QUD|A Chain A, Human P38 Map Kinase In Complex With
2-Amino-Phenylamino-Benzophenone
pdb|3UVP|A Chain A, Human P38 Map Kinase In Complex With A Benzamide
Substituted Benzosuberone
pdb|3UVQ|A Chain A, Human P38 Map Kinase In Complex With A Dibenzosuberone
Derivative
pdb|4EH2|A Chain A, Human P38 Map Kinase In Complex With Np-F1 And Rl87
pdb|4EH3|A Chain A, Human P38 Map Kinase In Complex With Np-F2 And Rl87
pdb|4EH4|A Chain A, Human P38 Map Kinase In Complex With Np-F3 And Rl87
pdb|4EH5|A Chain A, Human P38 Map Kinase In Complex With Np-F4 And Rl87
pdb|4EH6|A Chain A, Human P38 Map Kinase In Complex With Np-F5 And Rl87
pdb|4EH7|A Chain A, Human P38 Map Kinase In Complex With Np-F6 And Rl87
pdb|4EH8|A Chain A, Human P38 Map Kinase In Complex With Np-F7 And Rl87
pdb|4EH9|A Chain A, Human P38 Map Kinase In Complex With Np-F11 And Rl87
pdb|4EHV|A Chain A, Human P38 Map Kinase In Complex With Np-F10 And Rl87
pdb|3UVR|A Chain A, Human P38 Map Kinase In Complex With Km064
pdb|4DLI|A Chain A, Human P38 Map Kinase In Complex With Rl87
pdb|4DLJ|A Chain A, Human P38 Map Kinase In Complex With Rl163
Length = 360
Score = 33.9 bits (76), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 23/75 (30%), Positives = 37/75 (49%), Gaps = 6/75 (8%)
Query: 157 HCVLKPSNVLLDDDMTARVGDFGLARFLPPTRTQTSSIDVKGSIGYIAPEYGVG-NEVST 215
H LKPSN+ +++D ++ DFGLAR T + Y APE + +
Sbjct: 148 HRDLKPSNLAVNEDCELKILDFGLAR-----HTDDEMTGYVATRWYRAPEIMLNWMHYNQ 202
Query: 216 IGDVYSYGILLLELM 230
D++S G ++ EL+
Sbjct: 203 TVDIWSVGCIMAELL 217
>pdb|3MPT|A Chain A, Crystal Structure Of P38 Kinase In Complex With A
Pyrrole-2- Carboxamide Inhibitor
Length = 371
Score = 33.9 bits (76), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 23/75 (30%), Positives = 37/75 (49%), Gaps = 6/75 (8%)
Query: 157 HCVLKPSNVLLDDDMTARVGDFGLARFLPPTRTQTSSIDVKGSIGYIAPEYGVG-NEVST 215
H LKPSN+ +++D ++ DFGLAR T + Y APE + +
Sbjct: 159 HRDLKPSNLAVNEDCELKILDFGLAR-----HTDDEMTGYVATRWYRAPEIMLNWMHYNQ 213
Query: 216 IGDVYSYGILLLELM 230
D++S G ++ EL+
Sbjct: 214 TVDIWSVGCIMAELL 228
>pdb|2PUU|A Chain A, Crystal Structure Of P38 Complex With 1-(5-Tert-Butyl-2-P-
Tolyl-2h-Pyrazol-3-Yl)-3-[4-(6-Morpholin-4-Ylmethyl-
Pyridin-3-Yl)naphthalen-1-Yl]urea
pdb|3CTQ|A Chain A, Structure Of Map Kinase P38 In Complex With A
1-O-Tolyl-1,2, 3-Triazole-4-Carboxamide
Length = 348
Score = 33.9 bits (76), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 23/75 (30%), Positives = 37/75 (49%), Gaps = 6/75 (8%)
Query: 157 HCVLKPSNVLLDDDMTARVGDFGLARFLPPTRTQTSSIDVKGSIGYIAPEYGVG-NEVST 215
H LKPSN+ +++D ++ DFGLAR T + Y APE + +
Sbjct: 144 HRDLKPSNLAVNEDCELKILDFGLAR-----HTDDEMTGYVATRWYRAPEIMLNWMHYNQ 198
Query: 216 IGDVYSYGILLLELM 230
D++S G ++ EL+
Sbjct: 199 TVDIWSVGCIMAELL 213
>pdb|3HVC|A Chain A, Crystal Structure Of Human P38alpha Map Kinase
Length = 362
Score = 33.9 bits (76), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 23/75 (30%), Positives = 37/75 (49%), Gaps = 6/75 (8%)
Query: 157 HCVLKPSNVLLDDDMTARVGDFGLARFLPPTRTQTSSIDVKGSIGYIAPEYGVG-NEVST 215
H LKPSN+ +++D ++ DFGLAR T + Y APE + +
Sbjct: 150 HRDLKPSNLAVNEDCELKILDFGLAR-----HTDDEMTGYVATRWYRAPEIMLNWMHYNQ 204
Query: 216 IGDVYSYGILLLELM 230
D++S G ++ EL+
Sbjct: 205 TVDIWSVGCIMAELL 219
>pdb|3FI4|A Chain A, P38 Kinase Crystal Structure In Complex With Ro4499
pdb|3FKO|A Chain A, P38 Kinase Crystal Structure In Complex With Ro3668
pdb|3FLN|C Chain C, P38 Kinase Crystal Structure In Complex With R1487
Length = 372
Score = 33.9 bits (76), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 23/75 (30%), Positives = 37/75 (49%), Gaps = 6/75 (8%)
Query: 157 HCVLKPSNVLLDDDMTARVGDFGLARFLPPTRTQTSSIDVKGSIGYIAPEYGVG-NEVST 215
H LKPSN+ +++D ++ DFGLAR T + Y APE + +
Sbjct: 160 HRDLKPSNLAVNEDCELKILDFGLAR-----HTDDEMTGYVATRWYRAPEIMLNWMHYNQ 214
Query: 216 IGDVYSYGILLLELM 230
D++S G ++ EL+
Sbjct: 215 TVDIWSVGCIMAELL 229
>pdb|3TG1|A Chain A, Crystal Structure Of P38alpha In Complex With A Mapk
Docking Partner
Length = 380
Score = 33.9 bits (76), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 23/75 (30%), Positives = 37/75 (49%), Gaps = 6/75 (8%)
Query: 157 HCVLKPSNVLLDDDMTARVGDFGLARFLPPTRTQTSSIDVKGSIGYIAPEYGVG-NEVST 215
H LKPSN+ +++D ++ DFGLAR T + Y APE + +
Sbjct: 168 HRDLKPSNLAVNEDCELKILDFGLAR-----HTDDEMTGYVATRWYRAPEIMLNWMHYNQ 222
Query: 216 IGDVYSYGILLLELM 230
D++S G ++ EL+
Sbjct: 223 TVDIWSVGCIMAELL 237
>pdb|3D7Z|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biphenyl
Amide Inhibitor
Length = 360
Score = 33.9 bits (76), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 23/75 (30%), Positives = 37/75 (49%), Gaps = 6/75 (8%)
Query: 157 HCVLKPSNVLLDDDMTARVGDFGLARFLPPTRTQTSSIDVKGSIGYIAPEYGVG-NEVST 215
H LKPSN+ +++D ++ DFGLAR T + Y APE + +
Sbjct: 148 HRDLKPSNLAVNEDCELKILDFGLAR-----HTDDEMTGYVATRWYRAPEIMLNWMHYNQ 202
Query: 216 IGDVYSYGILLLELM 230
D++S G ++ EL+
Sbjct: 203 TVDIWSVGCIMAELL 217
>pdb|1OZ1|A Chain A, P38 Mitogen-Activated Kinase In Complex With 4-Azaindole
Inhibitor
Length = 372
Score = 33.9 bits (76), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 23/75 (30%), Positives = 37/75 (49%), Gaps = 6/75 (8%)
Query: 157 HCVLKPSNVLLDDDMTARVGDFGLARFLPPTRTQTSSIDVKGSIGYIAPEYGVG-NEVST 215
H LKPSN+ +++D ++ DFGLAR T + Y APE + +
Sbjct: 160 HRDLKPSNLAVNEDCELKILDFGLAR-----HTDDEMTGYVATRWYRAPEIMLNWMHYNQ 214
Query: 216 IGDVYSYGILLLELM 230
D++S G ++ EL+
Sbjct: 215 TVDIWSVGCIMAELL 229
>pdb|2GFS|A Chain A, P38 Kinase Crystal Structure In Complex With Ro3201195
pdb|3FKL|A Chain A, P38 Kinase Crystal Structure In Complex With Ro9552
pdb|3FKN|A Chain A, P38 Kinase Crystal Structure In Complex With Ro7125
pdb|3FL4|A Chain A, P38 Kinase Crystal Structure In Complex With Ro5634
pdb|3FLQ|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-((S)-2-Methanesulfonyl-1-Methyl-
Ethylamino)-8-Methyl-8h-Pyrido[2,3-D]pyrimidin
pdb|3FLS|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-((R)-2-Methanesulfonyl-1-Methyl-
Ethylamino)-8-Methyl-8h-Pyrido[2,3-D]pyrimidin-7-One
pdb|3FLW|A Chain A, P38 Kinase Crystal Structure In Complex With Pamapimod
pdb|3FLY|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-Isopropylamino-8-Methyl-8h-Pyrido[2,
3- D]pyrimidin-7-One
pdb|3FLZ|A Chain A, P38 Kinase Crystal Structure In Complex With
8-Methyl-6-Phenoxy-2-
(Tetrahydro-Pyran-4-Ylamino)-8h-Pyrido[2,
3-D]pyrimidin-7-One
pdb|3FMH|A Chain A, P38 Kinase Crystal Structure In Complex With
6-(2,4-Difluoro-Phenoxy)-
8-Methyl-2-((R)-1-Methyl-2-Tetrazol-2-Yl-Ethylamino)-8h-
Pyrido[2,3- D]pyrimidin-7-One
pdb|3FMJ|A Chain A, P38 Kinase Crystal Structure In Complex With
4-(5-Methyl-3-Phenyl- Isoxazol-4-Yl)-Pyrimidin-2-Ylamine
pdb|3FMK|A Chain A, P38 Kinase Crystal Structure In Complex With
6-(2,4-Difluoro-Phenoxy)-
8-Methyl-2-((S)-1-Methyl-2-Tetrazol-2-Yl-Ethylamino)-8h-
Pyrido[2,3- D]pyrimidin-7-One
pdb|3FML|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6224
pdb|3FMM|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6226
pdb|3FMN|A Chain A, P38 Kinase Crystal Structure In Complex With Ro2530
pdb|3FSF|A Chain A, P38 Kinase Crystal Structure In Complex With 3-(2,6-
Dichloro-Phenyl)-7-[4-(2-Diethylamino-Ethoxy)-
Phenylamino]-
1-Methyl-3,4-Dihydro-1h-Pyrimido[4,5-D]pyrimidin-2-One
pdb|3FSK|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6257
Length = 372
Score = 33.9 bits (76), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 23/75 (30%), Positives = 37/75 (49%), Gaps = 6/75 (8%)
Query: 157 HCVLKPSNVLLDDDMTARVGDFGLARFLPPTRTQTSSIDVKGSIGYIAPEYGVG-NEVST 215
H LKPSN+ +++D ++ DFGLAR T + Y APE + +
Sbjct: 160 HRDLKPSNLAVNEDCELKILDFGLAR-----HTDDEMTGYVATRWYRAPEIMLNWMHYNQ 214
Query: 216 IGDVYSYGILLLELM 230
D++S G ++ EL+
Sbjct: 215 TVDIWSVGCIMAELL 229
>pdb|3K3I|A Chain A, P38alpha Bound To Novel Dgf-Out Compound Pf-00215955
Length = 350
Score = 33.9 bits (76), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 23/75 (30%), Positives = 37/75 (49%), Gaps = 6/75 (8%)
Query: 157 HCVLKPSNVLLDDDMTARVGDFGLARFLPPTRTQTSSIDVKGSIGYIAPEYGVG-NEVST 215
H LKPSN+ +++D ++ DFGLAR T + Y APE + +
Sbjct: 146 HRDLKPSNLAVNEDCELKILDFGLAR-----HTDDEMTGYVATRWYRAPEIMLNWMHYNQ 200
Query: 216 IGDVYSYGILLLELM 230
D++S G ++ EL+
Sbjct: 201 TVDIWSVGCIMAELL 215
>pdb|3DT1|A Chain A, P38 Complexed With A Quinazoline Inhibitor
Length = 383
Score = 33.9 bits (76), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 23/75 (30%), Positives = 37/75 (49%), Gaps = 6/75 (8%)
Query: 157 HCVLKPSNVLLDDDMTARVGDFGLARFLPPTRTQTSSIDVKGSIGYIAPEYGVG-NEVST 215
H LKPSN+ +++D ++ DFGLAR T + Y APE + +
Sbjct: 171 HRDLKPSNLAVNEDCELKILDFGLAR-----HTDDEMTGYVATRWYRAPEIMLNWMHYNQ 225
Query: 216 IGDVYSYGILLLELM 230
D++S G ++ EL+
Sbjct: 226 TVDIWSVGCIMAELL 240
>pdb|1BMK|A Chain A, The Complex Structure Of The Map Kinase P38SB218655
pdb|1P38|A Chain A, The Structure Of The Map Kinase P38 At 2.1 Angstoms
Resolution
Length = 379
Score = 33.5 bits (75), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 23/75 (30%), Positives = 37/75 (49%), Gaps = 6/75 (8%)
Query: 157 HCVLKPSNVLLDDDMTARVGDFGLARFLPPTRTQTSSIDVKGSIGYIAPEYGVG-NEVST 215
H LKPSN+ +++D ++ DFGLAR T + Y APE + +
Sbjct: 167 HRDLKPSNLAVNEDCELKILDFGLAR-----HTDDEMTGYVATRWYRAPEIMLNWMHYNQ 221
Query: 216 IGDVYSYGILLLELM 230
D++S G ++ EL+
Sbjct: 222 TVDIWSVGCIMAELL 236
>pdb|1BL6|A Chain A, The Complex Structure Of The Map Kinase P38SB216995
pdb|1BL7|A Chain A, The Complex Structure Of The Map Kinase P38SB220025
pdb|2EWA|A Chain A, Dual Binding Mode Of Pyridinylimidazole To Map Kinase P38
pdb|1A9U|A Chain A, The Complex Structure Of The Map Kinase P38SB203580
pdb|3HA8|A Chain A, The Complex Structure Of The Map Kinase P38COMPOUND 14B
Length = 379
Score = 33.5 bits (75), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 23/75 (30%), Positives = 37/75 (49%), Gaps = 6/75 (8%)
Query: 157 HCVLKPSNVLLDDDMTARVGDFGLARFLPPTRTQTSSIDVKGSIGYIAPEYGVG-NEVST 215
H LKPSN+ +++D ++ DFGLAR T + Y APE + +
Sbjct: 167 HRDLKPSNLAVNEDCELKILDFGLAR-----HTDDEMTGYVATRWYRAPEIMLNWMHYNQ 221
Query: 216 IGDVYSYGILLLELM 230
D++S G ++ EL+
Sbjct: 222 TVDIWSVGCIMAELL 236
>pdb|3KQ7|A Chain A, Structure Of Human P38alpha With N-[4-Methyl-3-(6-{[2-(1-
Methylpyrrolidin-2-Yl)ethyl]amino}pyridine-3-
Amido)phenyl]- 2-(Morpholin-4-Yl)pyridine-4-Carboxamide
Length = 380
Score = 33.5 bits (75), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 23/75 (30%), Positives = 37/75 (49%), Gaps = 6/75 (8%)
Query: 157 HCVLKPSNVLLDDDMTARVGDFGLARFLPPTRTQTSSIDVKGSIGYIAPEYGVG-NEVST 215
H LKPSN+ +++D ++ DFGLAR T + Y APE + +
Sbjct: 168 HRDLKPSNLAVNEDCELKILDFGLAR-----HTDDEMTGYVATRWYRAPEIMLNWMHYNQ 222
Query: 216 IGDVYSYGILLLELM 230
D++S G ++ EL+
Sbjct: 223 TVDIWSVGCIMAELL 237
>pdb|3PY3|A Chain A, Crystal Structure Of Phosphorylated P38alpha Map Kinase
Length = 380
Score = 33.5 bits (75), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 23/75 (30%), Positives = 37/75 (49%), Gaps = 6/75 (8%)
Query: 157 HCVLKPSNVLLDDDMTARVGDFGLARFLPPTRTQTSSIDVKGSIGYIAPEYGVG-NEVST 215
H LKPSN+ +++D ++ DFGLAR T + Y APE + +
Sbjct: 168 HRDLKPSNLAVNEDCELKILDFGLAR-----HTDDEMXGXVATRWYRAPEIMLNWMHYNQ 222
Query: 216 IGDVYSYGILLLELM 230
D++S G ++ EL+
Sbjct: 223 TVDIWSVGCIMAELL 237
>pdb|4EWQ|A Chain A, Human P38 Alpha Mapk In Complex With A Pyridazine Based
Inhibitor
Length = 383
Score = 33.5 bits (75), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 23/75 (30%), Positives = 37/75 (49%), Gaps = 6/75 (8%)
Query: 157 HCVLKPSNVLLDDDMTARVGDFGLARFLPPTRTQTSSIDVKGSIGYIAPEYGVG-NEVST 215
H LKPSN+ +++D ++ DFGLAR T + Y APE + +
Sbjct: 171 HRDLKPSNLAVNEDCELKILDFGLAR-----HTDDEMXGYVATRWYRAPEIMLNWMHYNQ 225
Query: 216 IGDVYSYGILLLELM 230
D++S G ++ EL+
Sbjct: 226 TVDIWSVGCIMAELL 240
>pdb|3RP9|A Chain A, Crystal Structure Of The Apo Mapk From Toxoplasma Gondii,
25.M01780 Or Tgme49_007820
Length = 458
Score = 33.5 bits (75), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 29/122 (23%), Positives = 50/122 (40%), Gaps = 14/122 (11%)
Query: 61 KSFIAECKALRNIRHRNLIKVLTACLGVDYQGNDFKALVYEFMHNRSLKEWLYPISKEDE 120
K + E L + H +++KVL + D + D +V E S +
Sbjct: 97 KRILREIAILNRLNHDHVVKVLDIVIPKDVEKFDELYVVLEIAD-----------SDFKK 145
Query: 121 TYKRPXXXXXXXXXXIAIDVASALNYLHHDCQPVTAHCVLKPSNVLLDDDMTARVGDFGL 180
++ P + ++ + Y+H H LKP+N L++ D + +V DFGL
Sbjct: 146 LFRTPVYLTELHIKTLLYNLLVGVKYVH---SAGILHRDLKPANCLVNQDCSVKVCDFGL 202
Query: 181 AR 182
AR
Sbjct: 203 AR 204
>pdb|3H9F|A Chain A, Crystal Structure Of Human Dual Specificity Protein Kinase
(Ttk) In Complex With A Pyrimido-Diazepin Ligand
Length = 313
Score = 33.5 bits (75), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 20/63 (31%), Positives = 29/63 (46%), Gaps = 1/63 (1%)
Query: 144 LNYLHHDCQPVTAHCVLKPSNVLLDDDMTARVGDFGLARFLPPTRTQTSSIDVKGSIGYI 203
L +H Q H LKP+N L+ D M + DFG+A + P G++ Y+
Sbjct: 137 LEAVHTIHQHGIVHSDLKPANFLIVDGMLKLI-DFGIANQMQPDXXXVVKDSQVGTVNYM 195
Query: 204 APE 206
PE
Sbjct: 196 PPE 198
>pdb|1TKI|A Chain A, Autoinhibited Serine Kinase Domain Of The Giant Muscle
Protein Titin
pdb|1TKI|B Chain B, Autoinhibited Serine Kinase Domain Of The Giant Muscle
Protein Titin
Length = 321
Score = 33.5 bits (75), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 29/97 (29%), Positives = 46/97 (47%), Gaps = 16/97 (16%)
Query: 140 VASALNYLH-HDCQPVTAHCVLKPSNVLLDD--DMTARVGDFGLARFLPPT---RTQTSS 193
V AL +LH H+ H ++P N++ T ++ +FG AR L P R ++
Sbjct: 111 VCEALQFLHSHNI----GHFDIRPENIIYQTRRSSTIKIIEFGQARQLKPGDNFRLLFTA 166
Query: 194 IDVKGSIGYIAPEYGVGNEVSTIGDVYSYGILLLELM 230
+ Y APE + VST D++S G L+ L+
Sbjct: 167 PE------YYAPEVHQHDVVSTATDMWSLGTLVYVLL 197
>pdb|3KK9|A Chain A, Camkii Substrate Complex B
Length = 282
Score = 33.5 bits (75), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 23/82 (28%), Positives = 39/82 (47%), Gaps = 6/82 (7%)
Query: 157 HCVLKPSNVLLDDDM---TARVGDFGLARFLPPTRTQTSSIDVKGSIGYIAPEYGVGNEV 213
H LKP N+LL ++ DFGLA + + G+ GY++PE +
Sbjct: 127 HRNLKPENLLLASKAKGAAVKLADFGLAIEVNDSEAWHG---FAGTPGYLSPEVLKKDPY 183
Query: 214 STIGDVYSYGILLLELMIREKP 235
S D+++ G++L L++ P
Sbjct: 184 SKPVDIWACGVILYILLVGYPP 205
>pdb|3NIE|A Chain A, Crystal Structure Of Pf11_0147
pdb|3NIE|B Chain B, Crystal Structure Of Pf11_0147
Length = 429
Score = 33.5 bits (75), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 14/26 (53%), Positives = 19/26 (73%)
Query: 157 HCVLKPSNVLLDDDMTARVGDFGLAR 182
H LKP+N LL+ D + ++ DFGLAR
Sbjct: 154 HRDLKPANCLLNQDCSVKICDFGLAR 179
>pdb|3KK8|A Chain A, Camkii Substrate Complex A
Length = 284
Score = 33.5 bits (75), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 23/82 (28%), Positives = 39/82 (47%), Gaps = 6/82 (7%)
Query: 157 HCVLKPSNVLLDDDM---TARVGDFGLARFLPPTRTQTSSIDVKGSIGYIAPEYGVGNEV 213
H LKP N+LL ++ DFGLA + + G+ GY++PE +
Sbjct: 128 HRNLKPENLLLASKAKGAAVKLADFGLAIEVNDSEAWHG---FAGTPGYLSPEVLKKDPY 184
Query: 214 STIGDVYSYGILLLELMIREKP 235
S D+++ G++L L++ P
Sbjct: 185 SKPVDIWACGVILYILLVGYPP 206
>pdb|3KL8|A Chain A, Camkiintide Inhibitor Complex
pdb|3KL8|C Chain C, Camkiintide Inhibitor Complex
pdb|3KL8|E Chain E, Camkiintide Inhibitor Complex
pdb|3KL8|G Chain G, Camkiintide Inhibitor Complex
pdb|3KL8|I Chain I, Camkiintide Inhibitor Complex
Length = 269
Score = 33.1 bits (74), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 23/82 (28%), Positives = 39/82 (47%), Gaps = 6/82 (7%)
Query: 157 HCVLKPSNVLLDDDM---TARVGDFGLARFLPPTRTQTSSIDVKGSIGYIAPEYGVGNEV 213
H LKP N+LL ++ DFGLA + + G+ GY++PE +
Sbjct: 128 HRNLKPENLLLASKAKGAAVKLADFGLAIEVNDSEAWHG---FAGTPGYLSPEVLKKDPY 184
Query: 214 STIGDVYSYGILLLELMIREKP 235
S D+++ G++L L++ P
Sbjct: 185 SKPVDIWACGVILYILLVGYPP 206
>pdb|4G3C|A Chain A, Crystal Structure Of Apo Murine Nf-kappab Inducing Kinase
(nik)
pdb|4G3C|B Chain B, Crystal Structure Of Apo Murine Nf-kappab Inducing Kinase
(nik)
pdb|4G3E|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 6-alkynylindoline (cmp1)
pdb|4G3E|B Chain B, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 6-alkynylindoline (cmp1)
Length = 352
Score = 33.1 bits (74), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 31/108 (28%), Positives = 47/108 (43%), Gaps = 7/108 (6%)
Query: 143 ALNYLHHDCQPVTAHCVLKPSNVLLDDDMT-ARVGDFGLARFLPPTRTQTSSID---VKG 198
L YLH H +K NVLL D + A + DFG A L P S + + G
Sbjct: 178 GLEYLHTR---RILHGDVKADNVLLSSDGSRAALCDFGHALCLQPDGLGKSLLTGDYIPG 234
Query: 199 SIGYIAPEYGVGNEVSTIGDVYSYGILLLELMIREKPSDIMFEGDMNL 246
+ ++APE +G D++S ++L ++ P F G + L
Sbjct: 235 TETHMAPEVVMGKPCDAKVDIWSSCCMMLHMLNGCHPWTQYFRGPLCL 282
>pdb|4G3F|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 2-(aminothiazoly)phenol (cmp2)
Length = 336
Score = 33.1 bits (74), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 31/108 (28%), Positives = 47/108 (43%), Gaps = 7/108 (6%)
Query: 143 ALNYLHHDCQPVTAHCVLKPSNVLLDDDMT-ARVGDFGLARFLPPTRTQTSSID---VKG 198
L YLH H +K NVLL D + A + DFG A L P S + + G
Sbjct: 162 GLEYLHTR---RILHGDVKADNVLLSSDGSRAALCDFGHALCLQPDGLGKSLLTGDYIPG 218
Query: 199 SIGYIAPEYGVGNEVSTIGDVYSYGILLLELMIREKPSDIMFEGDMNL 246
+ ++APE +G D++S ++L ++ P F G + L
Sbjct: 219 TETHMAPEVVMGKPCDAKVDIWSSCCMMLHMLNGCHPWTQYFRGPLCL 266
>pdb|2BDW|A Chain A, Crystal Structure Of The Auto-Inhibited Kinase Domain Of
CalciumCALMODULIN ACTIVATED KINASE II
pdb|2BDW|B Chain B, Crystal Structure Of The Auto-Inhibited Kinase Domain Of
CalciumCALMODULIN ACTIVATED KINASE II
Length = 362
Score = 33.1 bits (74), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 23/82 (28%), Positives = 39/82 (47%), Gaps = 6/82 (7%)
Query: 157 HCVLKPSNVLLDDDM---TARVGDFGLARFLPPTRTQTSSIDVKGSIGYIAPEYGVGNEV 213
H LKP N+LL ++ DFGLA + + G+ GY++PE +
Sbjct: 151 HRNLKPENLLLASKAKGAAVKLADFGLAIEVNDSEAWHG---FAGTPGYLSPEVLKKDPY 207
Query: 214 STIGDVYSYGILLLELMIREKP 235
S D+++ G++L L++ P
Sbjct: 208 SKPVDIWACGVILYILLVGYPP 229
>pdb|4G3G|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) V408l Bound To A 2-(aminothiazolyl)phenol (cmp3)
Length = 350
Score = 33.1 bits (74), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 31/108 (28%), Positives = 47/108 (43%), Gaps = 7/108 (6%)
Query: 143 ALNYLHHDCQPVTAHCVLKPSNVLLDDDMT-ARVGDFGLARFLPPTRTQTSSID---VKG 198
L YLH H +K NVLL D + A + DFG A L P S + + G
Sbjct: 176 GLEYLHTR---RILHGDVKADNVLLSSDGSRAALCDFGHALCLQPDGLGKSLLTGDYIPG 232
Query: 199 SIGYIAPEYGVGNEVSTIGDVYSYGILLLELMIREKPSDIMFEGDMNL 246
+ ++APE +G D++S ++L ++ P F G + L
Sbjct: 233 TETHMAPEVVMGKPCDAKVDIWSSCCMMLHMLNGCHPWTQYFRGPLCL 280
>pdb|3RIZ|A Chain A, Crystal Structure Of The Plant Steroid Receptor Bri1
Ectodomain
pdb|3RJ0|A Chain A, Plant Steroid Receptor Bri1 Ectodomain In Complex With
Brassinolide
Length = 772
Score = 32.7 bits (73), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 18/40 (45%), Positives = 27/40 (67%), Gaps = 1/40 (2%)
Query: 1 LPSLLIALDVSGNKLTGSLHIEVGKLKNLEILDVSRNMLE 40
+P L I L++ N ++GS+ EVG L+ L ILD+S N L+
Sbjct: 652 MPYLFI-LNLGHNDISGSIPDEVGDLRGLNILDLSSNKLD 690
Score = 31.6 bits (70), Expect = 0.85, Method: Compositional matrix adjust.
Identities = 23/70 (32%), Positives = 33/70 (47%), Gaps = 8/70 (11%)
Query: 8 LDVSGNKLTGSLHIEVGKLKNLEILDVSRNMLEENLISAG-TFGFSHL-----RRQGAFK 61
L +SGNK++G ++V + NLE LDVS N + G HL + G F
Sbjct: 180 LAISGNKISG--DVDVSRCVNLEFLDVSSNNFSTGIPFLGDCSALQHLDISGNKLSGDFS 237
Query: 62 SFIAECKALR 71
I+ C L+
Sbjct: 238 RAISTCTELK 247
Score = 30.8 bits (68), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 14/36 (38%), Positives = 23/36 (63%)
Query: 8 LDVSGNKLTGSLHIEVGKLKNLEILDVSRNMLEENL 43
+ +S N+LTG + +G+L+NL IL +S N N+
Sbjct: 492 ISLSNNRLTGEIPKWIGRLENLAILKLSNNSFSGNI 527
Score = 28.5 bits (62), Expect = 5.9, Method: Compositional matrix adjust.
Identities = 14/35 (40%), Positives = 21/35 (60%)
Query: 3 SLLIALDVSGNKLTGSLHIEVGKLKNLEILDVSRN 37
S L LD+SGNKL+G + L++L++S N
Sbjct: 220 SALQHLDISGNKLSGDFSRAISTCTELKLLNISSN 254
>pdb|3RGX|A Chain A, Structural Insight Into Brassinosteroid Perception By Bri1
pdb|3RGZ|A Chain A, Structural Insight Into Brassinosteroid Perception By Bri1
Length = 768
Score = 32.7 bits (73), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 18/40 (45%), Positives = 27/40 (67%), Gaps = 1/40 (2%)
Query: 1 LPSLLIALDVSGNKLTGSLHIEVGKLKNLEILDVSRNMLE 40
+P L I L++ N ++GS+ EVG L+ L ILD+S N L+
Sbjct: 655 MPYLFI-LNLGHNDISGSIPDEVGDLRGLNILDLSSNKLD 693
Score = 31.6 bits (70), Expect = 0.77, Method: Compositional matrix adjust.
Identities = 23/70 (32%), Positives = 33/70 (47%), Gaps = 8/70 (11%)
Query: 8 LDVSGNKLTGSLHIEVGKLKNLEILDVSRNMLEENLISAG-TFGFSHL-----RRQGAFK 61
L +SGNK++G ++V + NLE LDVS N + G HL + G F
Sbjct: 183 LAISGNKISG--DVDVSRCVNLEFLDVSSNNFSTGIPFLGDCSALQHLDISGNKLSGDFS 240
Query: 62 SFIAECKALR 71
I+ C L+
Sbjct: 241 RAISTCTELK 250
Score = 30.8 bits (68), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 14/36 (38%), Positives = 23/36 (63%)
Query: 8 LDVSGNKLTGSLHIEVGKLKNLEILDVSRNMLEENL 43
+ +S N+LTG + +G+L+NL IL +S N N+
Sbjct: 495 ISLSNNRLTGEIPKWIGRLENLAILKLSNNSFSGNI 530
Score = 28.5 bits (62), Expect = 6.0, Method: Compositional matrix adjust.
Identities = 14/35 (40%), Positives = 21/35 (60%)
Query: 3 SLLIALDVSGNKLTGSLHIEVGKLKNLEILDVSRN 37
S L LD+SGNKL+G + L++L++S N
Sbjct: 223 SALQHLDISGNKLSGDFSRAISTCTELKLLNISSN 257
>pdb|3MH2|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3O8U|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 32.7 bits (73), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 22/75 (29%), Positives = 37/75 (49%), Gaps = 6/75 (8%)
Query: 157 HCVLKPSNVLLDDDMTARVGDFGLARFLPPTRTQTSSIDVKGSIGYIAPEYGVG-NEVST 215
H LKPSN+ +++D ++ D+GLAR T + Y APE + +
Sbjct: 148 HRDLKPSNLAVNEDCELKILDYGLAR-----HTDDEMTGYVATRWYRAPEIMLNWMHYNQ 202
Query: 216 IGDVYSYGILLLELM 230
D++S G ++ EL+
Sbjct: 203 TVDIWSVGCIMAELL 217
>pdb|4DN5|A Chain A, Crystal Structure Of Nf-kb-inducing Kinase (nik)
pdb|4DN5|B Chain B, Crystal Structure Of Nf-kb-inducing Kinase (nik)
Length = 356
Score = 32.7 bits (73), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 31/108 (28%), Positives = 47/108 (43%), Gaps = 7/108 (6%)
Query: 143 ALNYLHHDCQPVTAHCVLKPSNVLLDDDMT-ARVGDFGLARFLPP---TRTQTSSIDVKG 198
L YLH H +K NVLL D + A + DFG A L P + + + G
Sbjct: 178 GLEYLHSR---RILHGDVKADNVLLSSDGSHAALCDFGHAVCLQPDGLGKDLLTGDYIPG 234
Query: 199 SIGYIAPEYGVGNEVSTIGDVYSYGILLLELMIREKPSDIMFEGDMNL 246
+ ++APE +G DV+S ++L ++ P F G + L
Sbjct: 235 TETHMAPEVVLGRSCDAKVDVWSSCCMMLHMLNGCHPWTQFFRGPLCL 282
>pdb|3GCP|A Chain A, Human P38 Map Kinase In Complex With Sb203580
pdb|3GCQ|A Chain A, Human P38 Map Kinase In Complex With Rl45
pdb|3GCS|A Chain A, Human P38 Map Kinase In Complex With Sorafenib
pdb|3GCV|A Chain A, Human P38 Map Kinase In Complex With Rl62
pdb|3HV3|A Chain A, Human P38 Map Kinase In Complex With Rl49
pdb|3IW5|A Chain A, Human P38 Map Kinase In Complex With An Indole Derivative
pdb|3IW6|A Chain A, Human P38 Map Kinase In Complex With A Benzylpiperazin-
Pyrrol
pdb|3IW7|A Chain A, Human P38 Map Kinase In Complex With An Imidazo-Pyridine
pdb|3IW8|A Chain A, Structure Of Inactive Human P38 Map Kinase In Complex With
A Thiazole-Urea
pdb|3HUB|A Chain A, Human P38 Map Kinase In Complex With Scios-469
pdb|3L8S|A Chain A, Human P38 Map Kinase In Complex With Cp-547632
pdb|3LFB|A Chain A, Human P38 Map Kinase In Complex With Rl98
pdb|3LFC|A Chain A, Human P38 Map Kinase In Complex With Rl99
pdb|3LFD|A Chain A, Human P38 Map Kinase In Complex With Rl113
pdb|3LFE|A Chain A, Human P38 Map Kinase In Complex With Rl116
pdb|3LFF|A Chain A, Human P38 Map Kinase In Complex With Rl166
pdb|3PG3|A Chain A, Human P38 Map Kinase In Complex With Rl182
Length = 360
Score = 32.0 bits (71), Expect = 0.66, Method: Compositional matrix adjust.
Identities = 22/75 (29%), Positives = 36/75 (48%), Gaps = 6/75 (8%)
Query: 157 HCVLKPSNVLLDDDMTARVGDFGLARFLPPTRTQTSSIDVKGSIGYIAPEYGVG-NEVST 215
H LKPSN+ +++D ++ DFGL R T + Y APE + +
Sbjct: 148 HRDLKPSNLAVNEDSELKILDFGLCR-----HTDDEMTGYVATRWYRAPEIMLNWMHYNQ 202
Query: 216 IGDVYSYGILLLELM 230
D++S G ++ EL+
Sbjct: 203 TVDIWSVGCIMAELL 217
>pdb|3KVW|A Chain A, Crystal Structure Of Dual-Specificity Tyrosine
Phosphorylation Regulated Kinase 2 (Dyrk2) In Complex
With An Indirubin Ligand
Length = 429
Score = 31.6 bits (70), Expect = 0.73, Method: Compositional matrix adjust.
Identities = 24/76 (31%), Positives = 36/76 (47%), Gaps = 7/76 (9%)
Query: 157 HCVLKPSNVLLDDDMTA--RVGDFGLARFLPPTRTQTSSIDVKGSIGYIAPEYGVGNEVS 214
HC LKP N+LL + +V DFG + + Q ++ Y APE +G
Sbjct: 223 HCDLKPENILLKQQGRSGIKVIDFGSSCY----EHQRVYTXIQSRF-YRAPEVILGARYG 277
Query: 215 TIGDVYSYGILLLELM 230
D++S G +L EL+
Sbjct: 278 MPIDMWSLGCILAELL 293
>pdb|2AC3|A Chain A, Structure Of Human Mnk2 Kinase Domain
Length = 316
Score = 31.6 bits (70), Expect = 0.75, Method: Compositional matrix adjust.
Identities = 34/111 (30%), Positives = 49/111 (44%), Gaps = 18/111 (16%)
Query: 139 DVASALNYLHHDCQPVTAHCVLKPSNVLLDDD---MTARVGDFGLARFL------PPTRT 189
DVASAL++LH+ AH LKP N+L + ++ DF L + P T
Sbjct: 119 DVASALDFLHNK---GIAHRDLKPENILCEHPNQVSPVKICDFDLGSGIKLNGDCSPIST 175
Query: 190 QTSSIDVKGSIGYIAPEY--GVGNEVSTIG---DVYSYGILLLELMIREKP 235
+ GS Y+APE E S D++S G++L L+ P
Sbjct: 176 -PELLTPCGSAEYMAPEVVEAFSEEASIYDKRCDLWSLGVILYILLSGYPP 225
>pdb|4AZF|A Chain A, Human Dyrk2 In Complex With Leucettine L41
Length = 417
Score = 31.6 bits (70), Expect = 0.75, Method: Compositional matrix adjust.
Identities = 24/76 (31%), Positives = 36/76 (47%), Gaps = 7/76 (9%)
Query: 157 HCVLKPSNVLLDDDMTA--RVGDFGLARFLPPTRTQTSSIDVKGSIGYIAPEYGVGNEVS 214
HC LKP N+LL + +V DFG + + Q ++ Y APE +G
Sbjct: 223 HCDLKPENILLKQQGRSGIKVIDFGSSCY----EHQRVYTXIQSRF-YRAPEVILGARYG 277
Query: 215 TIGDVYSYGILLLELM 230
D++S G +L EL+
Sbjct: 278 MPIDMWSLGCILAELL 293
>pdb|3K2L|A Chain A, Crystal Structure Of Dual-Specificity Tyrosine
Phosphorylation Regulated Kinase 2 (Dyrk2)
Length = 429
Score = 31.6 bits (70), Expect = 0.83, Method: Compositional matrix adjust.
Identities = 24/76 (31%), Positives = 36/76 (47%), Gaps = 7/76 (9%)
Query: 157 HCVLKPSNVLLDDDMTA--RVGDFGLARFLPPTRTQTSSIDVKGSIGYIAPEYGVGNEVS 214
HC LKP N+LL + +V DFG + + Q ++ Y APE +G
Sbjct: 223 HCDLKPENILLKQQGRSGIKVIDFGSSCY----EHQRVYXXIQSRF-YRAPEVILGARYG 277
Query: 215 TIGDVYSYGILLLELM 230
D++S G +L EL+
Sbjct: 278 MPIDMWSLGCILAELL 293
>pdb|4EXU|A Chain A, Mapk13, Inactive Form
pdb|4EYJ|A Chain A, Mapk13 Complex With Inhibitor
pdb|4EYM|A Chain A, Mapk13 Complex With Inhibitor
Length = 371
Score = 31.2 bits (69), Expect = 0.88, Method: Compositional matrix adjust.
Identities = 41/174 (23%), Positives = 66/174 (37%), Gaps = 37/174 (21%)
Query: 66 ECKALRNIRHRNLIKVLTACLGVDYQGN--DFKALVYEFMHNRSLKEWLYPISKEDETYK 123
E L++++H N+I +L N DF LV FM K S+E Y
Sbjct: 91 ELLLLKHMQHENVIGLLDVFTPASSLRNFYDF-YLVMPFMQTDLQKIMGMEFSEEKIQY- 148
Query: 124 RPXXXXXXXXXXIAIDVASALNYLHHDCQPVTAHCVLKPSNVLLDDDMTARVGDFGLARF 183
+ + L Y+H H LKP N+ +++D ++ DFGLAR
Sbjct: 149 ------------LVYQMLKGLKYIHSAG---VVHRDLKPGNLAVNEDCELKILDFGLARH 193
Query: 184 LPPTRTQTSSIDVKGSIGYIAPEYGVGNEV-------STIGDVYSYGILLLELM 230
T GY+ + EV + D++S G ++ E++
Sbjct: 194 ADAEMT-----------GYVVTRWYRAPEVILSWMHYNQTVDIWSVGCIMAEML 236
>pdb|2H34|A Chain A, Apoenzyme Crystal Structure Of The Tuberculosis
SerineTHREONINE Kinase, Pkne
pdb|2H34|B Chain B, Apoenzyme Crystal Structure Of The Tuberculosis
SerineTHREONINE Kinase, Pkne
Length = 309
Score = 31.2 bits (69), Expect = 0.90, Method: Compositional matrix adjust.
Identities = 24/88 (27%), Positives = 41/88 (46%), Gaps = 5/88 (5%)
Query: 157 HCVLKPSNVLLDDDMTARVGDFGLARFLPPTRTQTSSIDVKGSIGYIAPEYGVGNEVSTI 216
H +KP N+L+ D A + DFG+A + T + G++ Y APE + +
Sbjct: 157 HRDVKPENILVSADDFAYLVDFGIASATTDEKL-TQLGNTVGTLYYXAPERFSESHATYR 215
Query: 217 GDVYSYGILLLELMIREKPSDIMFEGDM 244
D+Y+ +L E + P ++GD
Sbjct: 216 ADIYALTCVLYECLTGSPP----YQGDQ 239
>pdb|3COI|A Chain A, Crystal Structure Of P38delta Kinase
Length = 353
Score = 31.2 bits (69), Expect = 0.94, Method: Compositional matrix adjust.
Identities = 40/170 (23%), Positives = 65/170 (38%), Gaps = 37/170 (21%)
Query: 70 LRNIRHRNLIKVLTACLGVDYQGN--DFKALVYEFMHNRSLKEWLYPISKEDETYKRPXX 127
L++++H N+I +L N DF LV FM K S+E Y
Sbjct: 77 LKHMQHENVIGLLDVFTPASSLRNFYDF-YLVMPFMQTDLQKIMGLKFSEEKIQY----- 130
Query: 128 XXXXXXXXIAIDVASALNYLHHDCQPVTAHCVLKPSNVLLDDDMTARVGDFGLARFLPPT 187
+ + L Y+H H LKP N+ +++D ++ DFGLAR
Sbjct: 131 --------LVYQMLKGLKYIHSAG---VVHRDLKPGNLAVNEDCELKILDFGLARHADAE 179
Query: 188 RTQTSSIDVKGSIGYIAPEYGVGNEV-------STIGDVYSYGILLLELM 230
T GY+ + EV + D++S G ++ E++
Sbjct: 180 MT-----------GYVVTRWYRAPEVILSWMHYNQTVDIWSVGCIMAEML 218
>pdb|3O8P|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
pdb|3MPA|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 31.2 bits (69), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 22/75 (29%), Positives = 36/75 (48%), Gaps = 6/75 (8%)
Query: 157 HCVLKPSNVLLDDDMTARVGDFGLARFLPPTRTQTSSIDVKGSIGYIAPEYGVG-NEVST 215
H LKPSN+ +++D ++ FGLAR T + Y APE + +
Sbjct: 148 HRDLKPSNLAVNEDCELKILGFGLAR-----HTDDEMTGYVATRWYRAPEIMLNWMHYNQ 202
Query: 216 IGDVYSYGILLLELM 230
D++S G ++ EL+
Sbjct: 203 TVDIWSVGCIMAELL 217
>pdb|1OGQ|A Chain A, The Crystal Structure Of Pgip (Polygalacturonase
Inhibiting Protein), A Leucine Rich Repeat Protein
Involved In Plant Defense
Length = 313
Score = 30.8 bits (68), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 16/37 (43%), Positives = 23/37 (62%), Gaps = 1/37 (2%)
Query: 4 LLIALDVSGNKLTGSLHIEVGKLKNLEILDVSRNMLE 40
L ++ +S N+LTG + L NL +D+SRNMLE
Sbjct: 175 LFTSMTISRNRLTGKIPPTFANL-NLAFVDLSRNMLE 210
>pdb|3GI3|A Chain A, Crystal Structure Of A N-Phenyl-N'-Naphthylurea Analog In
Complex With P38 Map Kinase
Length = 360
Score = 30.8 bits (68), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 22/75 (29%), Positives = 36/75 (48%), Gaps = 6/75 (8%)
Query: 157 HCVLKPSNVLLDDDMTARVGDFGLARFLPPTRTQTSSIDVKGSIGYIAPEYGVG-NEVST 215
H LKPSN+ +++D ++ DF LAR T + Y APE + +
Sbjct: 148 HRDLKPSNLAVNEDCELKILDFYLAR-----HTDDEMTGYVATRWYRAPEIMLNWMHYNQ 202
Query: 216 IGDVYSYGILLLELM 230
D++S G ++ EL+
Sbjct: 203 TVDIWSVGCIMAELL 217
>pdb|1CM8|A Chain A, Phosphorylated Map Kinase P38-Gamma
pdb|1CM8|B Chain B, Phosphorylated Map Kinase P38-Gamma
Length = 367
Score = 30.8 bits (68), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 46/193 (23%), Positives = 80/193 (41%), Gaps = 34/193 (17%)
Query: 66 ECKALRNIRHRNLIKVLTACLGVDYQGNDFK--ALVYEFMHNRSLKEWLYPISKEDETYK 123
E + L+++RH N+I +L D +DF LV FM K + ED
Sbjct: 74 ELRLLKHMRHENVIGLLD-VFTPDETLDDFTDFYLVMPFMGTDLGKLMKHEKLGEDRI-- 130
Query: 124 RPXXXXXXXXXXIAIDVASALNYLHHDCQPVTAHCVLKPSNVLLDDDMTARVGDFGLARF 183
+ + L Y+H H LKP N+ +++D ++ DFGLAR
Sbjct: 131 ----------QFLVYQMLKGLRYIHAAG---IIHRDLKPGNLAVNEDCELKILDFGLAR- 176
Query: 184 LPPTRTQTSSIDVKGSI---GYIAPEYGVG-NEVSTIGDVYSYGILLLELMIREKPSDIM 239
Q S ++ G + Y APE + + D++S G ++ E++ +
Sbjct: 177 ------QADS-EMXGXVVTRWYRAPEVILNWMRYTQTVDIWSVGCIMAEMIT----GKTL 225
Query: 240 FEGDMNLHKFAKM 252
F+G +L + ++
Sbjct: 226 FKGSDHLDQLKEI 238
>pdb|3MH0|A Chain A, Mutagenesis Of P38 Map Kinase Eshtablishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3O8T|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg-Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 30.4 bits (67), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 22/75 (29%), Positives = 36/75 (48%), Gaps = 6/75 (8%)
Query: 157 HCVLKPSNVLLDDDMTARVGDFGLARFLPPTRTQTSSIDVKGSIGYIAPEYGVG-NEVST 215
H LKPSN+ +++D ++ D GLAR T + Y APE + +
Sbjct: 148 HRDLKPSNLAVNEDCELKILDAGLAR-----HTDDEMTGYVATRWYRAPEIMLNWMHYNQ 202
Query: 216 IGDVYSYGILLLELM 230
D++S G ++ EL+
Sbjct: 203 TVDIWSVGCIMAELL 217
>pdb|3MH3|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3OBJ|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Mutants In
Response To Inhibitor Binding
Length = 360
Score = 30.0 bits (66), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 22/75 (29%), Positives = 36/75 (48%), Gaps = 6/75 (8%)
Query: 157 HCVLKPSNVLLDDDMTARVGDFGLARFLPPTRTQTSSIDVKGSIGYIAPEYGVG-NEVST 215
H LKPSN+ +++D ++ D GLAR T + Y APE + +
Sbjct: 148 HRDLKPSNLAVNEDCELKILDRGLAR-----HTDDEMTGYVATRWYRAPEIMLNWMHYNQ 202
Query: 216 IGDVYSYGILLLELM 230
D++S G ++ EL+
Sbjct: 203 TVDIWSVGCIMAELL 217
>pdb|3MH1|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3OBG|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Mutants In
Response To Inhibitor Binding
pdb|3OC1|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 30.0 bits (66), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 22/75 (29%), Positives = 36/75 (48%), Gaps = 6/75 (8%)
Query: 157 HCVLKPSNVLLDDDMTARVGDFGLARFLPPTRTQTSSIDVKGSIGYIAPEYGVG-NEVST 215
H LKPSN+ +++D ++ D GLAR T + Y APE + +
Sbjct: 148 HRDLKPSNLAVNEDCELKILDGGLAR-----HTDDEMTGYVATRWYRAPEIMLNWMHYNQ 202
Query: 216 IGDVYSYGILLLELM 230
D++S G ++ EL+
Sbjct: 203 TVDIWSVGCIMAELL 217
>pdb|2X7F|A Chain A, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|B Chain B, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|C Chain C, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|D Chain D, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|E Chain E, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
Length = 326
Score = 29.6 bits (65), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 27/99 (27%), Positives = 46/99 (46%), Gaps = 10/99 (10%)
Query: 136 IAIDVASALNYLHHDCQPVTAHCVLKPSNVLLDDDMTARVGDFGLARFLPPTRTQTSSID 195
I ++ L++LH Q H +K NVLL ++ ++ DFG++ L RT
Sbjct: 134 ICREILRGLSHLH---QHKVIHRDIKGQNVLLTENAEVKLVDFGVSAQL--DRTVGRRNT 188
Query: 196 VKGSIGYIAPEYGVGNEVSTI-----GDVYSYGILLLEL 229
G+ ++APE +E D++S GI +E+
Sbjct: 189 FIGTPYWMAPEVIACDENPDATYDFKSDLWSLGITAIEM 227
>pdb|3EC7|A Chain A, Crystal Structure Of Putative Dehydrogenase From
Salmonella Typhimurium Lt2
pdb|3EC7|B Chain B, Crystal Structure Of Putative Dehydrogenase From
Salmonella Typhimurium Lt2
pdb|3EC7|C Chain C, Crystal Structure Of Putative Dehydrogenase From
Salmonella Typhimurium Lt2
pdb|3EC7|D Chain D, Crystal Structure Of Putative Dehydrogenase From
Salmonella Typhimurium Lt2
pdb|3EC7|E Chain E, Crystal Structure Of Putative Dehydrogenase From
Salmonella Typhimurium Lt2
pdb|3EC7|F Chain F, Crystal Structure Of Putative Dehydrogenase From
Salmonella Typhimurium Lt2
pdb|3EC7|G Chain G, Crystal Structure Of Putative Dehydrogenase From
Salmonella Typhimurium Lt2
pdb|3EC7|H Chain H, Crystal Structure Of Putative Dehydrogenase From
Salmonella Typhimurium Lt2
Length = 357
Score = 29.3 bits (64), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 14/36 (38%), Positives = 21/36 (58%)
Query: 321 LQSIKNTLLGPKNLATCKAVIGRATEQLNKYFTKQK 356
L+ + NT+ G + +A C V GRA L+KY + K
Sbjct: 39 LRRLANTVSGVEVVAVCDIVAGRAQAALDKYAIEAK 74
>pdb|3UIB|A Chain A, Map Kinase Lmampk10 From Leishmania Major In Complex With
Sb203580
Length = 362
Score = 28.9 bits (63), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 28/110 (25%), Positives = 52/110 (47%), Gaps = 11/110 (10%)
Query: 157 HCVLKPSNVLLDDDMTARVGDFGLARFLPPTRTQTSSIDVKGSIGYIAPEYGVGNE-VST 215
H L P N+LL D+ + DF LAR +T + + Y APE + + +
Sbjct: 157 HRDLHPGNILLADNNDITICDFNLAREDTADANKTHYVTHR---WYRAPELVMQFKGFTK 213
Query: 216 IGDVYSYGILLLELMIREKPSDIMFEGDM---NLHKFAKMALSNHVKDIV 262
+ D++S G ++ E+ R+ +F G L+K ++ + ++D+V
Sbjct: 214 LVDMWSAGCVMAEMFNRKA----LFRGSTFYNQLNKIVEVVGTPKIEDVV 259
>pdb|1YRP|A Chain A, Catalytic Domain Of Human Zip Kinase Phosphorylated At
Thr265
pdb|1YRP|B Chain B, Catalytic Domain Of Human Zip Kinase Phosphorylated At
Thr265
Length = 278
Score = 28.9 bits (63), Expect = 4.6, Method: Compositional matrix adjust.
Identities = 24/100 (24%), Positives = 44/100 (44%), Gaps = 10/100 (10%)
Query: 140 VASALNYLHHDCQPVTAHCVLKPSNVLLDD----DMTARVGDFGLARFLPPTRTQTSSID 195
+ ++YLH AH LKP N++L D + ++ DFG+A +
Sbjct: 124 ILDGVHYLH---SKRIAHFDLKPENIMLLDKNVPNPRIKLIDFGIAH---KIEAGNEFKN 177
Query: 196 VKGSIGYIAPEYGVGNEVSTIGDVYSYGILLLELMIREKP 235
+ G+ ++APE + D++S G++ L+ P
Sbjct: 178 IFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASP 217
>pdb|3PG1|A Chain A, Map Kinase Lmampk10 From Leishmania Major (1.95 Angs
Resolution)
Length = 362
Score = 28.9 bits (63), Expect = 4.8, Method: Compositional matrix adjust.
Identities = 28/110 (25%), Positives = 52/110 (47%), Gaps = 11/110 (10%)
Query: 157 HCVLKPSNVLLDDDMTARVGDFGLARFLPPTRTQTSSIDVKGSIGYIAPEYGVGNE-VST 215
H L P N+LL D+ + DF LAR +T + + Y APE + + +
Sbjct: 157 HRDLHPGNILLADNNDITICDFNLAREDTADANKTHYVTHR---WYRAPELVMQFKGFTK 213
Query: 216 IGDVYSYGILLLELMIREKPSDIMFEGDM---NLHKFAKMALSNHVKDIV 262
+ D++S G ++ E+ R+ +F G L+K ++ + ++D+V
Sbjct: 214 LVDMWSAGCVMAEMFNRKA----LFRGSTFYNQLNKIVEVVGTPKIEDVV 259
>pdb|3BHY|A Chain A, Crystal Structure Of Human Death Associated Protein Kinase
3 (Dapk3) In Complex With A Beta-Carboline Ligand
pdb|3BQR|A Chain A, Crystal Structure Of Human Death Associated Protein Kinase
3 (Dapk3) In Complex With An Imidazo-Pyridazine Ligand
Length = 283
Score = 28.9 bits (63), Expect = 5.2, Method: Compositional matrix adjust.
Identities = 24/100 (24%), Positives = 44/100 (44%), Gaps = 10/100 (10%)
Query: 140 VASALNYLHHDCQPVTAHCVLKPSNVLLDD----DMTARVGDFGLARFLPPTRTQTSSID 195
+ ++YLH AH LKP N++L D + ++ DFG+A +
Sbjct: 117 ILDGVHYLH---SKRIAHFDLKPENIMLLDKNVPNPRIKLIDFGIAH---KIEAGNEFKN 170
Query: 196 VKGSIGYIAPEYGVGNEVSTIGDVYSYGILLLELMIREKP 235
+ G+ ++APE + D++S G++ L+ P
Sbjct: 171 IFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASP 210
>pdb|2J90|A Chain A, Crystal Structure Of Human Zip Kinase In Complex With A
Tetracyclic Pyridone Inhibitor (pyridone 6)
pdb|2J90|B Chain B, Crystal Structure Of Human Zip Kinase In Complex With A
Tetracyclic Pyridone Inhibitor (pyridone 6)
Length = 304
Score = 28.9 bits (63), Expect = 5.3, Method: Compositional matrix adjust.
Identities = 24/100 (24%), Positives = 44/100 (44%), Gaps = 10/100 (10%)
Query: 140 VASALNYLHHDCQPVTAHCVLKPSNVLLDD----DMTARVGDFGLARFLPPTRTQTSSID 195
+ ++YLH AH LKP N++L D + ++ DFG+A +
Sbjct: 138 ILDGVHYLH---SKRIAHFDLKPENIMLLDKNVPNPRIKLIDFGIAH---KIEAGNEFKN 191
Query: 196 VKGSIGYIAPEYGVGNEVSTIGDVYSYGILLLELMIREKP 235
+ G+ ++APE + D++S G++ L+ P
Sbjct: 192 IFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASP 231
>pdb|2VX3|A Chain A, Crystal Structure Of The Human Dual Specificity Tyrosine-
Phosphorylation-Regulated Kinase 1a
pdb|2VX3|B Chain B, Crystal Structure Of The Human Dual Specificity Tyrosine-
Phosphorylation-Regulated Kinase 1a
pdb|2VX3|C Chain C, Crystal Structure Of The Human Dual Specificity Tyrosine-
Phosphorylation-Regulated Kinase 1a
pdb|2VX3|D Chain D, Crystal Structure Of The Human Dual Specificity Tyrosine-
Phosphorylation-Regulated Kinase 1a
pdb|2WO6|A Chain A, Human Dual-Specificity Tyrosine-Phosphorylation-Regulated
Kinase 1a In Complex With A Consensus Substrate Peptide
pdb|2WO6|B Chain B, Human Dual-Specificity Tyrosine-Phosphorylation-Regulated
Kinase 1a In Complex With A Consensus Substrate Peptide
Length = 382
Score = 28.1 bits (61), Expect = 8.5, Method: Compositional matrix adjust.
Identities = 24/79 (30%), Positives = 37/79 (46%), Gaps = 7/79 (8%)
Query: 157 HCVLKPSNVLLDDDMTA--RVGDFGLARFLPPTRTQTSSIDVKGSIGYIAPEYGVGNEVS 214
HC LKP N+LL + + ++ DFG + L Q S Y +PE +G
Sbjct: 182 HCDLKPENILLCNPKRSAIKIVDFGSSCQLGQRIYQXIQ-----SRFYRSPEVLLGMPYD 236
Query: 215 TIGDVYSYGILLLELMIRE 233
D++S G +L+E+ E
Sbjct: 237 LAIDMWSLGCILVEMHTGE 255
>pdb|3ANQ|A Chain A, Human Dyrk1aINHIBITOR COMPLEX
pdb|3ANQ|B Chain B, Human Dyrk1aINHIBITOR COMPLEX
pdb|3ANQ|C Chain C, Human Dyrk1aINHIBITOR COMPLEX
pdb|3ANQ|D Chain D, Human Dyrk1aINHIBITOR COMPLEX
pdb|3ANR|A Chain A, Human Dyrk1aHARMINE COMPLEX
pdb|3ANR|B Chain B, Human Dyrk1aHARMINE COMPLEX
pdb|3ANR|C Chain C, Human Dyrk1aHARMINE COMPLEX
pdb|3ANR|D Chain D, Human Dyrk1aHARMINE COMPLEX
Length = 368
Score = 28.1 bits (61), Expect = 9.0, Method: Compositional matrix adjust.
Identities = 24/79 (30%), Positives = 37/79 (46%), Gaps = 7/79 (8%)
Query: 157 HCVLKPSNVLLDDDMTA--RVGDFGLARFLPPTRTQTSSIDVKGSIGYIAPEYGVGNEVS 214
HC LKP N+LL + + ++ DFG + L Q S Y +PE +G
Sbjct: 163 HCDLKPENILLCNPKRSAIKIVDFGSSCQLGQRIYQXIQ-----SRFYRSPEVLLGMPYD 217
Query: 215 TIGDVYSYGILLLELMIRE 233
D++S G +L+E+ E
Sbjct: 218 LAIDMWSLGCILVEMHTGE 236
>pdb|4AZE|A Chain A, Human Dyrk1a In Complex With Leucettine L41
pdb|4AZE|B Chain B, Human Dyrk1a In Complex With Leucettine L41
pdb|4AZE|C Chain C, Human Dyrk1a In Complex With Leucettine L41
Length = 382
Score = 28.1 bits (61), Expect = 9.1, Method: Compositional matrix adjust.
Identities = 24/79 (30%), Positives = 35/79 (44%), Gaps = 7/79 (8%)
Query: 157 HCVLKPSNVLL--DDDMTARVGDFGLARFLPPTRTQTSSIDVKGSIGYIAPEYGVGNEVS 214
HC LKP N+LL ++ DFG + L Q S Y +PE +G
Sbjct: 182 HCDLKPENILLCNPKRXAIKIVDFGSSCQLGQRIYQXIQ-----SRFYRSPEVLLGMPYD 236
Query: 215 TIGDVYSYGILLLELMIRE 233
D++S G +L+E+ E
Sbjct: 237 LAIDMWSLGCILVEMHTGE 255
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.321 0.137 0.400
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 10,422,551
Number of Sequences: 62578
Number of extensions: 397344
Number of successful extensions: 2555
Number of sequences better than 100.0: 926
Number of HSP's better than 100.0 without gapping: 502
Number of HSP's successfully gapped in prelim test: 424
Number of HSP's that attempted gapping in prelim test: 1338
Number of HSP's gapped (non-prelim): 1008
length of query: 381
length of database: 14,973,337
effective HSP length: 101
effective length of query: 280
effective length of database: 8,652,959
effective search space: 2422828520
effective search space used: 2422828520
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 52 (24.6 bits)