Query 041758
Match_columns 183
No_of_seqs 192 out of 1889
Neff 7.2
Searched_HMMs 46136
Date Fri Mar 29 10:19:21 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/041758.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/041758hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 PLN02904 oxidoreductase 100.0 7.3E-32 1.6E-36 234.4 13.7 158 25-183 8-170 (357)
2 PLN02947 oxidoreductase 100.0 7.1E-32 1.5E-36 235.7 13.3 153 30-183 25-184 (374)
3 PLN02758 oxidoreductase, 2OG-F 100.0 6.3E-31 1.4E-35 228.8 13.2 152 30-183 14-173 (361)
4 PLN02216 protein SRG1 100.0 1.9E-30 4E-35 225.6 13.5 151 31-183 15-171 (357)
5 PLN02912 oxidoreductase, 2OG-F 100.0 2.9E-29 6.2E-34 217.5 13.3 153 29-183 4-159 (348)
6 PLN02393 leucoanthocyanidin di 100.0 3.8E-29 8.3E-34 217.7 12.7 153 29-183 11-172 (362)
7 PLN03178 leucoanthocyanidin di 100.0 1.2E-28 2.6E-33 214.5 11.9 152 31-183 6-170 (360)
8 PLN02639 oxidoreductase, 2OG-F 100.0 3.9E-28 8.4E-33 209.6 12.8 145 34-183 3-152 (337)
9 PLN02254 gibberellin 3-beta-di 100.0 3.5E-28 7.6E-33 211.4 11.5 136 40-183 26-167 (358)
10 PLN02704 flavonol synthase 99.9 1.5E-27 3.3E-32 205.7 13.4 148 32-183 5-159 (335)
11 PLN02515 naringenin,2-oxogluta 99.9 9.4E-28 2E-32 208.7 11.8 141 40-183 11-157 (358)
12 PLN00417 oxidoreductase, 2OG-F 99.9 3.1E-27 6.7E-32 204.8 13.5 149 32-183 8-164 (348)
13 PLN02276 gibberellin 20-oxidas 99.9 4.1E-27 8.8E-32 204.9 12.7 121 42-167 18-141 (361)
14 PF14226 DIOX_N: non-haem diox 99.9 2.9E-27 6.3E-32 173.9 7.8 106 68-177 1-115 (116)
15 KOG0143 Iron/ascorbate family 99.9 2.1E-26 4.6E-31 197.7 11.4 118 64-183 14-137 (322)
16 PLN03176 flavanone-3-hydroxyla 99.9 9.2E-26 2E-30 168.5 11.4 112 32-147 5-118 (120)
17 PLN02750 oxidoreductase, 2OG-F 99.9 1.4E-25 3.1E-30 194.2 12.9 118 42-163 2-119 (345)
18 PTZ00273 oxidase reductase; Pr 99.9 8.4E-24 1.8E-28 181.3 11.3 118 65-183 3-139 (320)
19 PLN02485 oxidoreductase 99.9 5.6E-23 1.2E-27 176.8 10.8 116 66-182 6-144 (329)
20 PLN02997 flavonol synthase 99.9 7.8E-23 1.7E-27 175.9 11.6 110 65-183 30-143 (325)
21 PLN02299 1-aminocyclopropane-1 99.9 7.7E-23 1.7E-27 175.6 9.7 111 65-183 4-117 (321)
22 PLN03002 oxidoreductase, 2OG-F 99.9 2.3E-22 5E-27 173.4 11.5 94 65-163 12-109 (332)
23 PLN02156 gibberellin 2-beta-di 99.9 5E-22 1.1E-26 171.5 10.8 108 65-183 24-137 (335)
24 COG3491 PcbC Isopenicillin N s 99.9 6.1E-22 1.3E-26 166.8 9.4 99 65-163 3-104 (322)
25 PLN02403 aminocyclopropanecarb 99.9 6.6E-22 1.4E-26 168.7 9.4 108 67-183 2-112 (303)
26 PLN02984 oxidoreductase, 2OG-F 99.8 6.7E-21 1.5E-25 164.9 11.1 111 65-183 36-160 (341)
27 PLN02365 2-oxoglutarate-depend 99.8 1.9E-20 4.2E-25 159.4 9.6 86 66-163 4-89 (300)
28 PLN03001 oxidoreductase, 2OG-F 98.5 1.6E-07 3.5E-12 78.8 4.3 70 113-183 1-78 (262)
29 PF07350 DUF1479: Protein of u 73.7 2.6 5.5E-05 37.9 2.4 57 63-123 45-101 (416)
30 PRK08130 putative aldolase; Va 69.7 6.4 0.00014 31.7 3.7 36 67-105 127-162 (213)
31 PRK08333 L-fuculose phosphate 68.3 6.4 0.00014 30.9 3.4 36 67-105 120-155 (184)
32 PRK05874 L-fuculose-phosphate 57.1 12 0.00026 30.4 3.2 36 67-105 127-162 (217)
33 PRK08660 L-fuculose phosphate 51.5 20 0.00043 28.0 3.5 35 67-105 115-149 (181)
34 PRK06833 L-fuculose phosphate 50.8 19 0.00042 29.0 3.4 36 67-105 124-159 (214)
35 COG1402 Uncharacterized protei 48.3 51 0.0011 27.6 5.6 42 81-122 88-132 (250)
36 cd00379 Ribosomal_L10_P0 Ribos 47.9 71 0.0015 23.8 6.0 39 81-119 3-42 (155)
37 PF03460 NIR_SIR_ferr: Nitrite 47.1 34 0.00074 22.0 3.6 38 82-119 23-68 (69)
38 PRK08087 L-fuculose phosphate 45.4 25 0.00054 28.3 3.3 36 67-105 122-157 (215)
39 PF00596 Aldolase_II: Class II 45.4 9.5 0.00021 29.6 0.8 37 66-105 122-159 (184)
40 TIGR01086 fucA L-fuculose phos 43.1 30 0.00066 27.8 3.4 36 67-105 121-156 (214)
41 PRK06755 hypothetical protein; 43.1 24 0.00053 28.6 2.8 36 67-105 136-171 (209)
42 PRK03634 rhamnulose-1-phosphat 42.4 26 0.00055 29.6 3.0 36 67-105 179-214 (274)
43 PRK06357 hypothetical protein; 42.2 38 0.00083 27.4 3.9 36 67-105 130-171 (216)
44 PF01471 PG_binding_1: Putativ 42.0 46 0.00099 20.4 3.5 42 83-124 3-44 (57)
45 cd05796 Ribosomal_P0_like Ribo 41.6 78 0.0017 24.4 5.4 39 81-119 3-42 (163)
46 TIGR02409 carnitine_bodg gamma 41.5 38 0.00081 29.5 4.0 52 65-121 107-158 (366)
47 PRK06557 L-ribulose-5-phosphat 39.8 27 0.00058 28.2 2.6 36 67-105 130-167 (221)
48 TIGR03328 salvage_mtnB methylt 39.3 41 0.00089 26.6 3.6 35 67-105 126-163 (193)
49 cd05795 Ribosomal_P0_L10e Ribo 39.1 89 0.0019 24.4 5.4 39 81-119 3-42 (175)
50 TIGR02624 rhamnu_1P_ald rhamnu 37.5 32 0.0007 29.0 2.8 36 67-105 177-212 (270)
51 PF11243 DUF3045: Protein of u 37.2 31 0.00067 23.9 2.1 21 86-106 36-56 (89)
52 PRK04019 rplP0 acidic ribosoma 37.0 91 0.002 27.0 5.6 39 81-119 8-47 (330)
53 PRK06754 mtnB methylthioribulo 34.7 41 0.00089 27.0 2.9 34 67-105 137-172 (208)
54 COG0244 RplJ Ribosomal protein 32.9 1.6E+02 0.0034 23.2 5.9 39 81-119 8-47 (175)
55 cd05797 Ribosomal_L10 Ribosoma 31.6 1.8E+02 0.004 21.9 6.0 39 81-119 5-44 (157)
56 COG3113 Predicted NTP binding 31.4 1.4E+02 0.0031 21.5 4.9 42 67-109 40-83 (99)
57 PRK05834 hypothetical protein; 30.7 62 0.0013 25.8 3.3 38 67-105 121-160 (194)
58 PRK09220 methylthioribulose-1- 29.3 76 0.0017 25.3 3.7 35 67-105 134-171 (204)
59 PRK07490 hypothetical protein; 28.2 56 0.0012 26.9 2.8 24 82-105 146-169 (245)
60 PRK06661 hypothetical protein; 27.7 54 0.0012 26.8 2.5 37 68-105 124-160 (231)
61 PRK00099 rplJ 50S ribosomal pr 27.1 2.4E+02 0.0052 21.7 6.0 39 81-119 6-45 (172)
62 PF02633 Creatininase: Creatin 26.1 1.8E+02 0.0038 23.6 5.3 37 81-117 84-123 (237)
63 COG0289 DapB Dihydrodipicolina 26.1 2.1E+02 0.0046 24.3 5.8 40 83-122 106-145 (266)
64 PF03668 ATP_bind_2: P-loop AT 24.4 1E+02 0.0022 26.4 3.7 29 88-118 17-45 (284)
65 PF11043 DUF2856: Protein of u 24.4 1.1E+02 0.0023 21.4 3.1 23 108-130 21-43 (97)
66 cd00398 Aldolase_II Class II A 24.0 57 0.0012 26.0 2.0 39 66-105 121-159 (209)
67 PF00466 Ribosomal_L10: Riboso 23.8 2.5E+02 0.0054 19.2 5.5 40 81-120 6-46 (100)
68 PF08823 PG_binding_2: Putativ 23.6 1.8E+02 0.0038 19.6 4.1 38 82-119 15-52 (74)
69 PF12368 DUF3650: Protein of u 22.5 39 0.00084 18.7 0.5 17 98-114 9-25 (28)
70 PRK04596 minC septum formation 21.2 1.8E+02 0.0038 24.4 4.4 49 67-115 50-99 (248)
71 PRK06770 hypothetical protein; 20.7 1.9E+02 0.0041 23.1 4.3 40 85-132 80-119 (180)
72 TIGR02410 carnitine_TMLD trime 20.4 1.4E+02 0.0029 26.1 3.8 51 67-121 100-150 (362)
No 1
>PLN02904 oxidoreductase
Probab=99.97 E-value=7.3e-32 Score=234.36 Aligned_cols=158 Identities=23% Similarity=0.419 Sum_probs=124.5
Q ss_pred hhccccccHHHHHHCCCCCCCCcccCCCCCchhhhcc-CCCCCCcceeeCCCCCCC-cHHHHHHHHHHHHHHcceEEEEe
Q 041758 25 AFDDTKAGVKGLVDAGIVNIPRIFIRPPEELVEELTS-HQTNSQVPVIDLDGVRGN-KLEEIVDQVRAAAETWGFFQVVN 102 (183)
Q Consensus 25 ~~~~~~~~v~~l~~~g~~~vP~~yv~p~~~~p~~~~~-~~~~~~IPvIDls~l~~~-~~~~~~~~l~~A~~~~GFF~v~n 102 (183)
.++++++||++|+++|+.+||++|++|++++|..... ......||||||+.+..+ .+.+++++|+.||++||||||+|
T Consensus 8 ~~~~~~~~~~~l~~~~~~~vp~~~~~~~~~~p~~~~~~~~~~~~iPvIDls~~~~~~~r~~~~~~l~~Ac~~~GFf~v~n 87 (357)
T PLN02904 8 VLDDSFTSAMTLTNSGVPHVPDRYVLPPSQRPMLGSSIGTSTITLPVIDLSLLHDPLLRSCVIHEIEMACKGFGFFQVIN 87 (357)
T ss_pred hhhccccchHHHHhcCCCCCCHHhCCCchhcccccccccccCCCCCEEECcccCCchhHHHHHHHHHHHHHHCceEEEEe
Confidence 3688999999999999999999999999998753111 112357999999987543 56788999999999999999999
Q ss_pred CCCChhHHHHHHHHHHHHhcCCHHHHHhhhccCCCCccccccCCCCCCCCCCCceeeeeeeeecCCCCCCCCCC---chh
Q 041758 103 HGIPLNVLEEIIEGIRKFNEQDVELKKEFYTRDRARNVRFNSNFDLHYSRTANWRDTLTISALASTDLDPNEYP---EVC 179 (183)
Q Consensus 103 HGI~~~li~~~~~~~~~FF~lp~eeK~~~~~~~~~~~~GY~~~~~~~~~~~~dwkE~~~~~~~~P~~~~~~~~P---~~~ 179 (183)
|||+.++++++++++++||+||.|+|+++.........||+.........+.+|+|.+.+. ..|....++.|| +.|
T Consensus 88 HGI~~~li~~~~~~~~~FF~LP~eeK~k~~~~~~~~~~~~g~~~~~~~~~~~~~~d~~~~~-~~p~~~~~n~WP~~~p~f 166 (357)
T PLN02904 88 HGIPSSVVKDALDAATRFFDLPVDEKMLLVSDNVHEPVRYGTSLNHSTDRVHYWRDFIKHY-SHPLSKWINLWPSNPPCY 166 (357)
T ss_pred CCCCHHHHHHHHHHHHHHhcCCHHHHhhhcccCCCCcccccccccccCCCCCCceEEeeec-cCCcccccccCcccchHH
Confidence 9999999999999999999999999999864333334567655433345667999998876 666543345676 678
Q ss_pred hccC
Q 041758 180 RYII 183 (183)
Q Consensus 180 re~~ 183 (183)
|+++
T Consensus 167 r~~~ 170 (357)
T PLN02904 167 KEKV 170 (357)
T ss_pred HHHH
Confidence 8763
No 2
>PLN02947 oxidoreductase
Probab=99.97 E-value=7.1e-32 Score=235.68 Aligned_cols=153 Identities=30% Similarity=0.528 Sum_probs=123.2
Q ss_pred cccHHHHHHCCCCCCCCcccCCCCCchhhhcc----CCCCCCcceeeCCCCCCCcHHHHHHHHHHHHHHcceEEEEeCCC
Q 041758 30 KAGVKGLVDAGIVNIPRIFIRPPEELVEELTS----HQTNSQVPVIDLDGVRGNKLEEIVDQVRAAAETWGFFQVVNHGI 105 (183)
Q Consensus 30 ~~~v~~l~~~g~~~vP~~yv~p~~~~p~~~~~----~~~~~~IPvIDls~l~~~~~~~~~~~l~~A~~~~GFF~v~nHGI 105 (183)
..+||.|+++|+..||++||+|++++|..... ......||||||+.+.+..+..++++|++||++||||||+||||
T Consensus 25 ~~~v~~l~~~~~~~vp~~yv~p~~~~~~~~~~~~~~~~~~~~iPvIDls~l~~~~~~~~~~~l~~Ac~~~GFF~v~nHGI 104 (374)
T PLN02947 25 QKGVKHLCDSGITKVPAKYILPASDRPGLTRDEAIAASGNLKLPVIDLAELRGSNRPHVLATLAAACREYGFFQVVNHGV 104 (374)
T ss_pred ecCHHHHHhcCCCcCCHHhcCCchhccccccccccccCCCCCCCeEECcccCCccHHHHHHHHHHHHHHCcEEEEEcCCC
Confidence 36899999999999999999999988753110 01345799999998854357789999999999999999999999
Q ss_pred ChhHHHHHHHHHHHHhcCCHHHHHhhhccCCCCccccccCCCCCCCCCCCceeeeeeeeecCCCCCCCCCC---chhhcc
Q 041758 106 PLNVLEEIIEGIRKFNEQDVELKKEFYTRDRARNVRFNSNFDLHYSRTANWRDTLTISALASTDLDPNEYP---EVCRYI 182 (183)
Q Consensus 106 ~~~li~~~~~~~~~FF~lp~eeK~~~~~~~~~~~~GY~~~~~~~~~~~~dwkE~~~~~~~~P~~~~~~~~P---~~~re~ 182 (183)
+.++++++++.+++||+||.|+|+++.........||+..+....+...+|+|.|.+. ..|....++.|| +.||++
T Consensus 105 p~~li~~~~~~~~~FF~LP~eeK~k~~~~~~~~~~gyg~~~~~~~~~~~~~~e~~~~~-~~p~~~~~~~WP~~~~~fr~~ 183 (374)
T PLN02947 105 PSEVIGGMIDVARRFFELPLEERAKYMSADMRAPVRYGTSFNQNKDAVFCWRDFLKLV-CHPLSDVLPHWPSSPADLRKV 183 (374)
T ss_pred CHHHHHHHHHHHHHHhcCCHHHHhhhhcccCCCCeeeccccccccccccCceeceeee-cCCcccccccCccchHHHHHH
Confidence 9999999999999999999999999864433345688766554456778999999988 788544445675 678875
Q ss_pred C
Q 041758 183 I 183 (183)
Q Consensus 183 ~ 183 (183)
+
T Consensus 184 ~ 184 (374)
T PLN02947 184 A 184 (374)
T ss_pred H
Confidence 3
No 3
>PLN02758 oxidoreductase, 2OG-Fe(II) oxygenase family protein
Probab=99.97 E-value=6.3e-31 Score=228.81 Aligned_cols=152 Identities=25% Similarity=0.432 Sum_probs=122.0
Q ss_pred cccHHHHHHCCCCCCCCcccCCCCCchhhhc-cCCCCCCcceeeCCCCCC-C--cHHHHHHHHHHHHHHcceEEEEeCCC
Q 041758 30 KAGVKGLVDAGIVNIPRIFIRPPEELVEELT-SHQTNSQVPVIDLDGVRG-N--KLEEIVDQVRAAAETWGFFQVVNHGI 105 (183)
Q Consensus 30 ~~~v~~l~~~g~~~vP~~yv~p~~~~p~~~~-~~~~~~~IPvIDls~l~~-~--~~~~~~~~l~~A~~~~GFF~v~nHGI 105 (183)
..+||.|+++|+++||++|++|++++|.... .......||||||+.+.+ + ++.+++++|++||++||||||+||||
T Consensus 14 ~~~~~~l~~~~~~~vp~~~v~~~~~~p~~~~~~~~~~~~IPvIDl~~l~~~~~~~~~~~~~~l~~Ac~~~GFF~v~nHGi 93 (361)
T PLN02758 14 IDDVQELRKSKPTTVPERFIRDMDERPDLASDTLHAPDDIPVIDFSRLVKGDNDELFSEILKLRLACEEWGFFQVINHGI 93 (361)
T ss_pred cccHHHHHhcCCCCCCHHHcCCchhccccccccccCCCCCCeEEchhhcCCChHHHHHHHHHHHHHHHhCeEEEEecCCC
Confidence 3469999999999999999999998875310 112345799999998764 2 34667899999999999999999999
Q ss_pred ChhHHHHHHHHHHHHhcCCHHHHHhhhccCCCCccccccCCCCCCCCCCCceeeeeeeeecCCC-CCCCCCC---chhhc
Q 041758 106 PLNVLEEIIEGIRKFNEQDVELKKEFYTRDRARNVRFNSNFDLHYSRTANWRDTLTISALASTD-LDPNEYP---EVCRY 181 (183)
Q Consensus 106 ~~~li~~~~~~~~~FF~lp~eeK~~~~~~~~~~~~GY~~~~~~~~~~~~dwkE~~~~~~~~P~~-~~~~~~P---~~~re 181 (183)
+.++++++++.+++||+||.|+|+++.. .++...||+..+........||+|.|.++ +.|.. ..++.|| +.||+
T Consensus 94 ~~~l~~~~~~~~~~FF~LP~eeK~k~~~-~~~~~~GY~~~~~~~~~~~~d~~e~~~~~-~~p~~~~~~~~WP~~~~~fr~ 171 (361)
T PLN02758 94 ELELLEEIEKVAREFFMLPLEEKQKYPM-APGTVQGYGQAFVFSEDQKLDWCNMFALG-VEPHFIRNPKLWPTKPARFSE 171 (361)
T ss_pred CHHHHHHHHHHHHHHhcCCHHHHHHhcc-cCCCccccCcccccccccccCeeEEEEee-ccCccccccccCccccHHHHH
Confidence 9999999999999999999999999863 44456799876554556678999999998 77742 3355676 57887
Q ss_pred cC
Q 041758 182 II 183 (183)
Q Consensus 182 ~~ 183 (183)
++
T Consensus 172 ~~ 173 (361)
T PLN02758 172 TL 173 (361)
T ss_pred HH
Confidence 63
No 4
>PLN02216 protein SRG1
Probab=99.97 E-value=1.9e-30 Score=225.57 Aligned_cols=151 Identities=23% Similarity=0.483 Sum_probs=118.8
Q ss_pred ccHHHHHHC-CCCCCCCcccCCCCCchhhhccCCCCCCcceeeCCCCCCC-cHHHHHHHHHHHHHHcceEEEEeCCCChh
Q 041758 31 AGVKGLVDA-GIVNIPRIFIRPPEELVEELTSHQTNSQVPVIDLDGVRGN-KLEEIVDQVRAAAETWGFFQVVNHGIPLN 108 (183)
Q Consensus 31 ~~v~~l~~~-g~~~vP~~yv~p~~~~p~~~~~~~~~~~IPvIDls~l~~~-~~~~~~~~l~~A~~~~GFF~v~nHGI~~~ 108 (183)
..|+.|+.+ +++.||++||+|++++|.....+.....||||||+.+.++ .+.+++++|++||++||||||+||||+.+
T Consensus 15 ~~~~~~~~~~~~~~~p~~~v~p~~~~~~~~~~~~~~~~iPvIDls~~~~~~~~~~~~~~l~~Ac~~~GFF~v~nHGI~~~ 94 (357)
T PLN02216 15 PSVQEMVKEKMITTVPPRYVRSDQDKTEIAVDSGLSSEIPIIDMKRLCSSTAMDSEVEKLDFACKEWGFFQLVNHGIDSS 94 (357)
T ss_pred hhHHHHHhcCCCCCCCHhhCcCcccCCccccccCcCCCCCeEEChhccCCccHHHHHHHHHHHHHHCcEEEEECCCCCHH
Confidence 458999886 8899999999999998743111112257999999988643 35678999999999999999999999999
Q ss_pred HHHHHHHHHHHHhcCCHHHHHhhhccCCCCccccccCCCCCCCCCCCceeeeeeeeecCCC-CCCCCC---CchhhccC
Q 041758 109 VLEEIIEGIRKFNEQDVELKKEFYTRDRARNVRFNSNFDLHYSRTANWRDTLTISALASTD-LDPNEY---PEVCRYII 183 (183)
Q Consensus 109 li~~~~~~~~~FF~lp~eeK~~~~~~~~~~~~GY~~~~~~~~~~~~dwkE~~~~~~~~P~~-~~~~~~---P~~~re~~ 183 (183)
+++++++.+++||+||.|+|+++.. .++...||+.........+.||+|.|.+. ..|.. ..++.| |+.||+++
T Consensus 95 li~~~~~~~~~FF~LP~eeK~k~~~-~~~~~~Gy~~~~~~~~~~~~d~~e~~~~~-~~p~~~~~~~~WP~~p~~fr~~~ 171 (357)
T PLN02216 95 FLDKVKSEIQDFFNLPMEEKKKLWQ-RPGEIEGFGQAFVVSEDQKLDWADMFFLT-MQPVRLRKPHLFPKLPLPFRDTL 171 (357)
T ss_pred HHHHHHHHHHHHHcCCHHHHHhhhc-CCCCccccCccccccccccCCceeeeeee-ccCcccccchhcccchHHHHHHH
Confidence 9999999999999999999999864 34456799876555556778999999988 77732 223345 46788763
No 5
>PLN02912 oxidoreductase, 2OG-Fe(II) oxygenase family protein
Probab=99.96 E-value=2.9e-29 Score=217.49 Aligned_cols=153 Identities=24% Similarity=0.490 Sum_probs=117.0
Q ss_pred ccccHHHHHHCCCCCCCCcccCCCCCchhhhccCCCCCCcceeeCCCCCCCcHHHHHHHHHHHHHHcceEEEEeCCCChh
Q 041758 29 TKAGVKGLVDAGIVNIPRIFIRPPEELVEELTSHQTNSQVPVIDLDGVRGNKLEEIVDQVRAAAETWGFFQVVNHGIPLN 108 (183)
Q Consensus 29 ~~~~v~~l~~~g~~~vP~~yv~p~~~~p~~~~~~~~~~~IPvIDls~l~~~~~~~~~~~l~~A~~~~GFF~v~nHGI~~~ 108 (183)
.+..||+|. +++..||+.|++|++++|...........||+|||+.+.++++.+++++|++||++||||||+||||+.+
T Consensus 4 ~~~~~~~~~-~~~~~~p~~~~~~~~~~~~~~~~~~~~~~iPvIDls~~~~~~~~~~~~~l~~A~~~~GFf~v~nHGI~~~ 82 (348)
T PLN02912 4 SKLLVSDIA-SVVDHVPSNYVRPVSDRPNMSEVETSGDSIPLIDLRDLHGPNRADIINQFAHACSSYGFFQIKNHGVPEE 82 (348)
T ss_pred chhHHHHHh-cCCCCCCHHhcCCchhccccccccccCCCCCeEECcccCCcCHHHHHHHHHHHHHHCCEEEEEeCCCCHH
Confidence 345688886 7899999999999988874311112345799999998864457788999999999999999999999999
Q ss_pred HHHHHHHHHHHHhcCCHHHHHhhhccCCCCccccccCCCCCCCCCCCceeeeeeeeecCCCCCCCCCC---chhhccC
Q 041758 109 VLEEIIEGIRKFNEQDVELKKEFYTRDRARNVRFNSNFDLHYSRTANWRDTLTISALASTDLDPNEYP---EVCRYII 183 (183)
Q Consensus 109 li~~~~~~~~~FF~lp~eeK~~~~~~~~~~~~GY~~~~~~~~~~~~dwkE~~~~~~~~P~~~~~~~~P---~~~re~~ 183 (183)
+++++++++++||+||.|+|++++...+....+|+..+........+|+|.+.+. ..|....++.|| +.||+++
T Consensus 83 l~~~~~~~~~~FF~LP~eeK~k~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~-~~~~~~~~n~wP~~~~~fr~~~ 159 (348)
T PLN02912 83 TIKKMMNVAREFFHQSESERVKHYSADTKKTTRLSTSFNVSKEKVSNWRDFLRLH-CYPIEDFIEEWPSTPISFREVT 159 (348)
T ss_pred HHHHHHHHHHHHhcCCHHHHHhHhhcCCCCcccccccccccccccCCchheEEEe-ecCcccccccCcchhHHHHHHH
Confidence 9999999999999999999999765443334444444433345568999999887 666433345665 6788763
No 6
>PLN02393 leucoanthocyanidin dioxygenase like protein
Probab=99.96 E-value=3.8e-29 Score=217.70 Aligned_cols=153 Identities=27% Similarity=0.548 Sum_probs=120.6
Q ss_pred ccccHHHHHHCCCCCCCCcccCCCCCchhhh--ccCCCCCCcceeeCCCCCCC---cHHHHHHHHHHHHHHcceEEEEeC
Q 041758 29 TKAGVKGLVDAGIVNIPRIFIRPPEELVEEL--TSHQTNSQVPVIDLDGVRGN---KLEEIVDQVRAAAETWGFFQVVNH 103 (183)
Q Consensus 29 ~~~~v~~l~~~g~~~vP~~yv~p~~~~p~~~--~~~~~~~~IPvIDls~l~~~---~~~~~~~~l~~A~~~~GFF~v~nH 103 (183)
..+.|+.|++++..+||+.||+|+++++... ........||||||+.+.++ .|.+++++|.+||++||||||+||
T Consensus 11 ~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~iPvIDls~l~~~~~~~r~~~~~~l~~Ac~~~GFF~l~nH 90 (362)
T PLN02393 11 PIVRVQSLSESGLPTIPDRYVKPPSQRPNSSNTTSAPAEINIPVIDLSSLFSDDARLRDATLRAISEACREWGFFQVVNH 90 (362)
T ss_pred ccchHHHHHhcCCCcCCHHHcCCchhccccccccccCcCCCCCeEECccccCCChHHHHHHHHHHHHHHHHCcEEEEEeC
Confidence 3467999999999999999999999887431 01124568999999998642 478899999999999999999999
Q ss_pred CCChhHHHHHHHHHHHHhcCCHHHHHhhhccCCCCccccccCCCCCCCCCCCceeeeeeeeecCCC-CCCCCCC---chh
Q 041758 104 GIPLNVLEEIIEGIRKFNEQDVELKKEFYTRDRARNVRFNSNFDLHYSRTANWRDTLTISALASTD-LDPNEYP---EVC 179 (183)
Q Consensus 104 GI~~~li~~~~~~~~~FF~lp~eeK~~~~~~~~~~~~GY~~~~~~~~~~~~dwkE~~~~~~~~P~~-~~~~~~P---~~~ 179 (183)
||+.++++++++.+++||+||.|+|+++. ..+....||++..........||+|.|.+. ..|.. ..++.|| +.|
T Consensus 91 GI~~~li~~~~~~~~~FF~LP~eeK~~~~-~~~~~~~Gy~~~~~~~~~~~~d~~e~~~~~-~~~~~~~~~n~wP~~~~~f 168 (362)
T PLN02393 91 GVRPELMDRAREAWREFFHLPLEVKQRYA-NSPATYEGYGSRLGVEKGAILDWSDYYFLH-YLPSSLKDPNKWPSLPPSC 168 (362)
T ss_pred CCCHHHHHHHHHHHHHHHcCCHHHHHhhh-cccCcccccccccccccccccCchhheeee-ecCccccchhhCcccchHH
Confidence 99999999999999999999999999986 344456799655433345678999999887 66632 2234565 678
Q ss_pred hccC
Q 041758 180 RYII 183 (183)
Q Consensus 180 re~~ 183 (183)
|+++
T Consensus 169 r~~~ 172 (362)
T PLN02393 169 RELI 172 (362)
T ss_pred HHHH
Confidence 8763
No 7
>PLN03178 leucoanthocyanidin dioxygenase; Provisional
Probab=99.96 E-value=1.2e-28 Score=214.48 Aligned_cols=152 Identities=29% Similarity=0.494 Sum_probs=118.2
Q ss_pred ccHHHHHHCCCCCCCCcccCCCCCchhhhccC-----CCCCCcceeeCCCCCCC---cHHHHHHHHHHHHHHcceEEEEe
Q 041758 31 AGVKGLVDAGIVNIPRIFIRPPEELVEELTSH-----QTNSQVPVIDLDGVRGN---KLEEIVDQVRAAAETWGFFQVVN 102 (183)
Q Consensus 31 ~~v~~l~~~g~~~vP~~yv~p~~~~p~~~~~~-----~~~~~IPvIDls~l~~~---~~~~~~~~l~~A~~~~GFF~v~n 102 (183)
..|+.|+++++..||+.|++|++.++...... .....||||||+.+.++ .+..++++|++||++||||||+|
T Consensus 6 ~~~~~l~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~iPvIDls~~~~~~~~~~~~~~~~l~~Ac~~~GFF~l~n 85 (360)
T PLN03178 6 PRVEALASSGVSSIPKEYIRPPEERPSIGDVFEEEKKAAGPQVPVVDLSNIESDDEVVREACVEAVRAAAAEWGVMHLVG 85 (360)
T ss_pred hhHHHHHhcCCCCCCHHHcCCchhcccccccccccccccCCCCCEEEchhhcCCChhhHHHHHHHHHHHHHHCCEEEEEc
Confidence 35899999999999999999998887532111 13457999999988642 47789999999999999999999
Q ss_pred CCCChhHHHHHHHHHHHHhcCCHHHHHhhhccC-CCCccccccCCCCCCCCCCCceeeeeeeeecCCC-CCCCCCC---c
Q 041758 103 HGIPLNVLEEIIEGIRKFNEQDVELKKEFYTRD-RARNVRFNSNFDLHYSRTANWRDTLTISALASTD-LDPNEYP---E 177 (183)
Q Consensus 103 HGI~~~li~~~~~~~~~FF~lp~eeK~~~~~~~-~~~~~GY~~~~~~~~~~~~dwkE~~~~~~~~P~~-~~~~~~P---~ 177 (183)
|||+.++++++++.+++||+||.|+|+++.... .+...||+...........||+|++.+. ..|.. ..++.|| +
T Consensus 86 HGI~~~l~~~~~~~~~~FF~LP~e~K~~~~~~~~~~~~~Gy~~~~~~~~~~~~d~~e~~~~~-~~p~~~~~~n~wP~~~p 164 (360)
T PLN03178 86 HGIPADLLDRVRKAGEAFFRLPIEEKEKYANDQARGAAQGYGSKLAANASGQLEWEDYFFHL-TLPEDKRDPSLWPKTPP 164 (360)
T ss_pred CCCCHHHHHHHHHHHHHHHcCCHHHHHHhhccCCCCCccccccccccccccccchhHhhccc-cCCccccccccCCCCch
Confidence 999999999999999999999999999986432 1245799765443345567999998776 66643 2345676 4
Q ss_pred hhhccC
Q 041758 178 VCRYII 183 (183)
Q Consensus 178 ~~re~~ 183 (183)
.||+++
T Consensus 165 ~fr~~~ 170 (360)
T PLN03178 165 DYVPAT 170 (360)
T ss_pred HHHHHH
Confidence 688753
No 8
>PLN02639 oxidoreductase, 2OG-Fe(II) oxygenase family protein
Probab=99.95 E-value=3.9e-28 Score=209.57 Aligned_cols=145 Identities=30% Similarity=0.558 Sum_probs=112.6
Q ss_pred HHHHHCCC--CCCCCcccCCCCCchhhhccCCCCCCcceeeCCCCCCCcHHHHHHHHHHHHHHcceEEEEeCCCChhHHH
Q 041758 34 KGLVDAGI--VNIPRIFIRPPEELVEELTSHQTNSQVPVIDLDGVRGNKLEEIVDQVRAAAETWGFFQVVNHGIPLNVLE 111 (183)
Q Consensus 34 ~~l~~~g~--~~vP~~yv~p~~~~p~~~~~~~~~~~IPvIDls~l~~~~~~~~~~~l~~A~~~~GFF~v~nHGI~~~li~ 111 (183)
+.|+++|+ .+||+.||+|++++|... .......||||||+.. .+.+++++|.+||++||||||+||||+.++++
T Consensus 3 ~~~~~~~~~~~~~p~~~~~~~~~~p~~~-~~~~~~~iPvIDls~~---~~~~~~~~l~~Ac~~~GFf~v~nHGI~~~l~~ 78 (337)
T PLN02639 3 TKLLSTGIRHTTLPESYVRPESERPRLS-EVSTCENVPVIDLGSP---DRAQVVQQIGDACRRYGFFQVINHGVSAELVE 78 (337)
T ss_pred hhhhhhcCCcCcCCHHhcCCchhccccc-ccccCCCCCeEECCCc---cHHHHHHHHHHHHHhCCEEEEEcCCCCHHHHH
Confidence 45889987 899999999998887421 1123467999999975 47789999999999999999999999999999
Q ss_pred HHHHHHHHHhcCCHHHHHhhhccCCCCccccccCCCCCCCCCCCceeeeeeeeecCCCCCCCCCC---chhhccC
Q 041758 112 EIIEGIRKFNEQDVELKKEFYTRDRARNVRFNSNFDLHYSRTANWRDTLTISALASTDLDPNEYP---EVCRYII 183 (183)
Q Consensus 112 ~~~~~~~~FF~lp~eeK~~~~~~~~~~~~GY~~~~~~~~~~~~dwkE~~~~~~~~P~~~~~~~~P---~~~re~~ 183 (183)
++++.+++||+||.|+|+++....+....+|+..+....+...+|+|.|.+. ..|....++.|| +.||+++
T Consensus 79 ~~~~~~~~fF~LP~e~K~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~-~~p~~~~~n~wP~~~~~fr~~~ 152 (337)
T PLN02639 79 KMLAVAHEFFRLPVEEKMKLYSDDPTKTMRLSTSFNVRKEKVHNWRDYLRLH-CYPLDKYVPEWPSNPPSFKEIV 152 (337)
T ss_pred HHHHHHHHHhcCCHHHHhhhhccCCCCccccccccccccCcccCchheEEee-ecCCcccchhCcccchHHHHHH
Confidence 9999999999999999999764443333444444433345577999999988 777543344565 5788753
No 9
>PLN02254 gibberellin 3-beta-dioxygenase
Probab=99.95 E-value=3.5e-28 Score=211.38 Aligned_cols=136 Identities=24% Similarity=0.397 Sum_probs=105.6
Q ss_pred CCCCCCCcccCCCCCc--hhhhcc-CCCCCCcceeeCCCCCCCcHHHHHHHHHHHHHHcceEEEEeCCCChhHHHHHHHH
Q 041758 40 GIVNIPRIFIRPPEEL--VEELTS-HQTNSQVPVIDLDGVRGNKLEEIVDQVRAAAETWGFFQVVNHGIPLNVLEEIIEG 116 (183)
Q Consensus 40 g~~~vP~~yv~p~~~~--p~~~~~-~~~~~~IPvIDls~l~~~~~~~~~~~l~~A~~~~GFF~v~nHGI~~~li~~~~~~ 116 (183)
+...||++||+|++++ |..... ......||||||+.. .++++|++||++||||||+||||+.++++++++.
T Consensus 26 ~~~~vp~~~v~p~~~~~~~~~~~~~~~~~~~iPvIDl~~~------~~~~~l~~Ac~~~GFF~vvnHGI~~~l~~~~~~~ 99 (358)
T PLN02254 26 SLQTLPDSHVWTPKDDLLFSSAPSPSTTDESIPVIDLSDP------NALTLIGHACETWGVFQVTNHGIPLSLLDDIESQ 99 (358)
T ss_pred hhccCChhhcCChhhccCccccccccCcCCCCCeEeCCCH------HHHHHHHHHHHHCCEEEEEcCCCCHHHHHHHHHH
Confidence 3467999999999888 321100 122357999999853 4789999999999999999999999999999999
Q ss_pred HHHHhcCCHHHHHhhhccCCCCccccccCCCCCCCCCCCceeeeeeeeecCCCCCCCCCC---chhhccC
Q 041758 117 IRKFNEQDVELKKEFYTRDRARNVRFNSNFDLHYSRTANWRDTLTISALASTDLDPNEYP---EVCRYII 183 (183)
Q Consensus 117 ~~~FF~lp~eeK~~~~~~~~~~~~GY~~~~~~~~~~~~dwkE~~~~~~~~P~~~~~~~~P---~~~re~~ 183 (183)
+++||+||.|+|+++. ..+....||+.........+.||+|.|.+. ..|....++.|| +.||+++
T Consensus 100 ~~~FF~LP~EeK~k~~-~~~~~~~Gy~~~~~~~~~~~~~w~e~~~~~-~~p~~~~~~~wP~~~~~fr~~~ 167 (358)
T PLN02254 100 TRRLFSLPAQRKLKAA-RSPDGVSGYGVARISSFFNKKMWSEGFTIM-GSPLEHARQLWPQDHTKFCDVM 167 (358)
T ss_pred HHHHHcCCHHHHHhhc-cCCCCcccccccccccccCCCCceeeEEee-cCccccchhhCCCCchHHHHHH
Confidence 9999999999999985 344556799876544455678999999988 677433334565 5688753
No 10
>PLN02704 flavonol synthase
Probab=99.95 E-value=1.5e-27 Score=205.74 Aligned_cols=148 Identities=25% Similarity=0.397 Sum_probs=114.7
Q ss_pred cHHHHHHCC--CCCCCCcccCCCCCchhhhccCCCCCCcceeeCCCCCCCcHHHHHHHHHHHHHHcceEEEEeCCCChhH
Q 041758 32 GVKGLVDAG--IVNIPRIFIRPPEELVEELTSHQTNSQVPVIDLDGVRGNKLEEIVDQVRAAAETWGFFQVVNHGIPLNV 109 (183)
Q Consensus 32 ~v~~l~~~g--~~~vP~~yv~p~~~~p~~~~~~~~~~~IPvIDls~l~~~~~~~~~~~l~~A~~~~GFF~v~nHGI~~~l 109 (183)
+|+.|++++ ..+||++|++|++++|.+.........||||||+.. ++.+++++|++||++||||||+||||+.++
T Consensus 5 ~~~~~~~~~~~~~~~p~~~~~~~~~~p~~~~~~~~~~~iPvIDls~~---~~~~~~~~l~~Ac~~~GFf~l~nHGI~~~l 81 (335)
T PLN02704 5 RVQAIASSSLLKETIPEEFIRSEKEQPAITTFHGVDPQVPTIDLSDP---DEEKLTRLIAEASKEWGMFQIVNHGIPSEV 81 (335)
T ss_pred hHHHHHhCCCCcCCCCHHHcCCcccccccccccccCCCCCeEECCCc---cHHHHHHHHHHHHHHcCEEEEEcCCCCHHH
Confidence 688998876 789999999999998864211223557999999975 356788999999999999999999999999
Q ss_pred HHHHHHHHHHHhcCCHHHHHhhhccC-CCCccccccCCCCCCCCCCCceeeeeeeeecCCC-CCCCCCC---chhhccC
Q 041758 110 LEEIIEGIRKFNEQDVELKKEFYTRD-RARNVRFNSNFDLHYSRTANWRDTLTISALASTD-LDPNEYP---EVCRYII 183 (183)
Q Consensus 110 i~~~~~~~~~FF~lp~eeK~~~~~~~-~~~~~GY~~~~~~~~~~~~dwkE~~~~~~~~P~~-~~~~~~P---~~~re~~ 183 (183)
++++++.+++||+||.|+|+++.... .....||+...........+|+|.+... .+|.. ...+.|| +.||+++
T Consensus 82 ~~~~~~~~~~FF~LP~e~K~~~~~~~~~~~~~Gy~~~~~~~~~~~~~~~d~~~~~-~~p~~~~~~n~wP~~~p~fr~~~ 159 (335)
T PLN02704 82 ISKLQKVGKEFFELPQEEKEVYAKPPDSKSIEGYGTKLQKEPEGKKAWVDHLFHR-IWPPSAINYQFWPKNPPSYREVN 159 (335)
T ss_pred HHHHHHHHHHHHcCCHHHHHHhhccCCCcccccccccccccccCcccceeeeEee-ecCCcccchhhCccccchhHHHH
Confidence 99999999999999999999986432 2234799765544446678999988766 55532 2234565 5788763
No 11
>PLN02515 naringenin,2-oxoglutarate 3-dioxygenase
Probab=99.95 E-value=9.4e-28 Score=208.71 Aligned_cols=141 Identities=26% Similarity=0.420 Sum_probs=108.8
Q ss_pred CCCCCCCcccCCCCCchhhhccCCCCCCcceeeCCCCCCC--cHHHHHHHHHHHHHHcceEEEEeCCCChhHHHHHHHHH
Q 041758 40 GIVNIPRIFIRPPEELVEELTSHQTNSQVPVIDLDGVRGN--KLEEIVDQVRAAAETWGFFQVVNHGIPLNVLEEIIEGI 117 (183)
Q Consensus 40 g~~~vP~~yv~p~~~~p~~~~~~~~~~~IPvIDls~l~~~--~~~~~~~~l~~A~~~~GFF~v~nHGI~~~li~~~~~~~ 117 (183)
|+..||++|++|++++|... .......||||||+.+.++ .+.+++++|++||++||||||+||||+.++++++++.+
T Consensus 11 ~~~~~p~~~~~~~~~~~~~~-~~~~~~~iPvIDls~~~~~~~~~~~~~~~l~~Ac~~~GFf~v~nHGI~~~li~~~~~~~ 89 (358)
T PLN02515 11 GESTLQSSFVRDEDERPKVA-YNQFSDEIPVISLAGIDEVGGRRGEICRKIVEACEDWGIFQVVDHGVDANLVADMTRLA 89 (358)
T ss_pred CCCcCCHHhcCCchhccCcc-ccccCCCCCEEEChhccCCchHHHHHHHHHHHHHHHCcEEEEEcCCCCHHHHHHHHHHH
Confidence 46799999999998887431 1122347999999988532 57789999999999999999999999999999999999
Q ss_pred HHHhcCCHHHHHhhhccCCCCccccccCCCCCCCCCCCceeeeeeeeecCCC-CCCCCCC---chhhccC
Q 041758 118 RKFNEQDVELKKEFYTRDRARNVRFNSNFDLHYSRTANWRDTLTISALASTD-LDPNEYP---EVCRYII 183 (183)
Q Consensus 118 ~~FF~lp~eeK~~~~~~~~~~~~GY~~~~~~~~~~~~dwkE~~~~~~~~P~~-~~~~~~P---~~~re~~ 183 (183)
++||+||.|+|+++... .....||.........++.||+|.|.+. ..|.. ..++.|| +.||+++
T Consensus 90 ~~FF~LP~eeK~k~~~~-~~~~~Gy~~~~~~~~~~~~d~kE~~~~~-~~~~~~~~~n~WP~~~~~fr~~~ 157 (358)
T PLN02515 90 RDFFALPAEEKLRFDMS-GGKKGGFIVSSHLQGEAVQDWREIVTYF-SYPVRTRDYSRWPDKPEGWRAVT 157 (358)
T ss_pred HHHhcCCHHHHhhhCcC-CCCccCcccccccccccccCceeeeccc-cCcccccccccccccchHHHHHH
Confidence 99999999999997543 3335788644333345578999999876 56642 2345676 5688753
No 12
>PLN00417 oxidoreductase, 2OG-Fe(II) oxygenase family protein
Probab=99.95 E-value=3.1e-27 Score=204.79 Aligned_cols=149 Identities=23% Similarity=0.352 Sum_probs=113.5
Q ss_pred cHHHHHHCCCCCCCCcccCCCCCchhhhc--cCCCCCCcceeeCCCCCC-C-cHHHHHHHHHHHHHHcceEEEEeCCCCh
Q 041758 32 GVKGLVDAGIVNIPRIFIRPPEELVEELT--SHQTNSQVPVIDLDGVRG-N-KLEEIVDQVRAAAETWGFFQVVNHGIPL 107 (183)
Q Consensus 32 ~v~~l~~~g~~~vP~~yv~p~~~~p~~~~--~~~~~~~IPvIDls~l~~-~-~~~~~~~~l~~A~~~~GFF~v~nHGI~~ 107 (183)
-||+|++++ ..||+.|++|+..++.... .......||||||+.+.+ + .+...+++|++||++||||||+||||+.
T Consensus 8 ~~~~~~~~~-~~~p~~~~~~~~~~~~~~~~~~~~~~~~IPvIDls~~~~~~~~~~~~~~~l~~A~~~~GFf~l~nHGI~~ 86 (348)
T PLN00417 8 TVQEVVAAG-EGLPERYLHTPTGDGEGQPLNGAVPEMDIPAIDLSLLLSSSDDGREELSKLHSALSTWGVVQVMNHGITE 86 (348)
T ss_pred hHHHHHhCC-CCCCccccCCcccccccccccccccCCCCCeEEChhhcCCCchHHHHHHHHHHHHHHCCEEEEEcCCCCH
Confidence 489999876 5899999999987542101 112345799999998754 2 3445679999999999999999999999
Q ss_pred hHHHHHHHHHHHHhcCCHHHHHhhhccCCCCccccccCCCCCCCCCCCceeeeeeeeecCCC-CCCCCCC---chhhccC
Q 041758 108 NVLEEIIEGIRKFNEQDVELKKEFYTRDRARNVRFNSNFDLHYSRTANWRDTLTISALASTD-LDPNEYP---EVCRYII 183 (183)
Q Consensus 108 ~li~~~~~~~~~FF~lp~eeK~~~~~~~~~~~~GY~~~~~~~~~~~~dwkE~~~~~~~~P~~-~~~~~~P---~~~re~~ 183 (183)
++++++++.+++||+||.|+|+++.. ..+...||+...........||+|.+++. .+|.. ..++.|| +.||+++
T Consensus 87 ~l~~~~~~~~~~FF~LP~eeK~~~~~-~~~~~~GY~~~~~~~~~~~~d~~e~~~~~-~~p~~~~~~n~wP~~~~~fr~~~ 164 (348)
T PLN00417 87 AFLDKIYKLTKQFFALPTEEKQKCAR-EIGSIQGYGNDMILSDDQVLDWIDRLYLT-TYPEDQRQLKFWPQVPVGFRETL 164 (348)
T ss_pred HHHHHHHHHHHHHHcCCHHHHHHhhc-CCCCccccccccccccCCCcCccceeecc-cCCcccccccccccccHHHHHHH
Confidence 99999999999999999999999864 33456799765443445678999999887 66642 2234565 6788753
No 13
>PLN02276 gibberellin 20-oxidase
Probab=99.94 E-value=4.1e-27 Score=204.93 Aligned_cols=121 Identities=30% Similarity=0.456 Sum_probs=100.7
Q ss_pred CCCCCcccCCCCCchhhhccCCCCCCcceeeCCCCCC-C--cHHHHHHHHHHHHHHcceEEEEeCCCChhHHHHHHHHHH
Q 041758 42 VNIPRIFIRPPEELVEELTSHQTNSQVPVIDLDGVRG-N--KLEEIVDQVRAAAETWGFFQVVNHGIPLNVLEEIIEGIR 118 (183)
Q Consensus 42 ~~vP~~yv~p~~~~p~~~~~~~~~~~IPvIDls~l~~-~--~~~~~~~~l~~A~~~~GFF~v~nHGI~~~li~~~~~~~~ 118 (183)
++||+.|++|.+++|.. ......||||||+.+.+ + .+..++++|++||++||||||+||||+.++++++++.++
T Consensus 18 ~~vp~~~~~~~~~~p~~---~~~~~~iPvIDls~~~~~~~~~~~~~~~~l~~Ac~~~GFF~l~nHGI~~~l~~~~~~~~~ 94 (361)
T PLN02276 18 SNIPAQFIWPDEEKPSA---AVPELAVPLIDLGGFLSGDEAATAEAARLVREACLKHGFFQVVNHGVDAALIRAAHEYMD 94 (361)
T ss_pred CCCCHHhcCCccccCCC---CCcCCCCCeEEChhhcCCChHHHHHHHHHHHHHHHHCcEEEEEcCCCCHHHHHHHHHHHH
Confidence 57999999999888752 12345799999998753 2 467799999999999999999999999999999999999
Q ss_pred HHhcCCHHHHHhhhccCCCCccccccCCCCCCCCCCCceeeeeeeeecC
Q 041758 119 KFNEQDVELKKEFYTRDRARNVRFNSNFDLHYSRTANWRDTLTISALAS 167 (183)
Q Consensus 119 ~FF~lp~eeK~~~~~~~~~~~~GY~~~~~~~~~~~~dwkE~~~~~~~~P 167 (183)
+||+||.|+|+++. ..++...||+........+..||+|+|.++ ..|
T Consensus 95 ~FF~LP~eeK~k~~-~~~~~~~GY~~~~~~~~~~~~d~~E~~~~~-~~~ 141 (361)
T PLN02276 95 AFFKLPLSEKQRAQ-RKPGESCGYASSHTGRFSSKLPWKETLSFG-YHA 141 (361)
T ss_pred HHHcCCHHHHHhhc-cCCCCccccCccCccccCCCCCeeeeEEEe-ccC
Confidence 99999999999985 344567899876544445568999999998 655
No 14
>PF14226 DIOX_N: non-haem dioxygenase in morphine synthesis N-terminal; PDB: 3OOX_A 1BK0_A 1IPS_B 1QIQ_A 1OC1_A 2Y86_A 2Y60_A 1W03_A 2VE1_A 1QJF_A ....
Probab=99.94 E-value=2.9e-27 Score=173.95 Aligned_cols=106 Identities=30% Similarity=0.625 Sum_probs=84.8
Q ss_pred cceeeCCCCCCCcHHHHHHHHHHHHHHcceEEEEeCCCChhHHHHHHHHHHHHhcCCHHHHHhhhccCCCCccccccCCC
Q 041758 68 VPVIDLDGVRGNKLEEIVDQVRAAAETWGFFQVVNHGIPLNVLEEIIEGIRKFNEQDVELKKEFYTRDRARNVRFNSNFD 147 (183)
Q Consensus 68 IPvIDls~l~~~~~~~~~~~l~~A~~~~GFF~v~nHGI~~~li~~~~~~~~~FF~lp~eeK~~~~~~~~~~~~GY~~~~~ 147 (183)
||||||+. ....+..++++|..||++||||||+||||+.++++++++.+++||+||.|+|+++. +. ...+||.....
T Consensus 1 iPvIDls~-~~~~~~~~~~~l~~A~~~~GFf~l~nhGi~~~l~~~~~~~~~~fF~lp~e~K~~~~-~~-~~~~Gy~~~~~ 77 (116)
T PF14226_consen 1 IPVIDLSP-DPADREEVAEQLRDACEEWGFFYLVNHGIPQELIDRVFAAAREFFALPLEEKQKYA-RS-PSYRGYSPPGS 77 (116)
T ss_dssp --EEEHGG-CHHHHHHHHHHHHHHHHHTSEEEEESSSSSHHHHHHHHHHHHHHHCSHHHHHHHHB-CC-TTCSEEEESEE
T ss_pred CCeEECCC-CCccHHHHHHHHHHHHHhCCEEEEecccccchhhHHHHHHHHHHHHhhHHHHHHhc-CC-CCCcccccCCc
Confidence 79999997 21268899999999999999999999999999999999999999999999999984 33 47789987654
Q ss_pred CCCC-CCCCceeeeeeeeec-CCC-------CCCCCCCc
Q 041758 148 LHYS-RTANWRDTLTISALA-STD-------LDPNEYPE 177 (183)
Q Consensus 148 ~~~~-~~~dwkE~~~~~~~~-P~~-------~~~~~~P~ 177 (183)
.... ...||+|+|+++ .. |.. ..++.||.
T Consensus 78 ~~~~~~~~d~~E~~~~~-~~~~~~~p~~~~~~~~n~WP~ 115 (116)
T PF14226_consen 78 ESTDGGKPDWKESFNIG-PDLPEDDPAYPPLYGPNIWPD 115 (116)
T ss_dssp ECCTTCCCCSEEEEEEE-CC-STTCHHTGCTS-GGGS-T
T ss_pred cccCCCCCCceEEeEEE-CCCCccccccccccCCCCCCC
Confidence 4444 489999999999 65 422 23457875
No 15
>KOG0143 consensus Iron/ascorbate family oxidoreductases [Secondary metabolites biosynthesis, transport and catabolism; General function prediction only]
Probab=99.94 E-value=2.1e-26 Score=197.67 Aligned_cols=118 Identities=36% Similarity=0.633 Sum_probs=98.2
Q ss_pred CCCCcceeeCCCCCCC--cHHHHHHHHHHHHHHcceEEEEeCCCChhHHHHHHHHHHHHhcCCHHHHHhhhccCCCCccc
Q 041758 64 TNSQVPVIDLDGVRGN--KLEEIVDQVRAAAETWGFFQVVNHGIPLNVLEEIIEGIRKFNEQDVELKKEFYTRDRARNVR 141 (183)
Q Consensus 64 ~~~~IPvIDls~l~~~--~~~~~~~~l~~A~~~~GFF~v~nHGI~~~li~~~~~~~~~FF~lp~eeK~~~~~~~~~~~~G 141 (183)
....||||||+.+..+ .+..++++|++||++||||||+|||||.+++++|++.+++||+||.|+|+++.. ......|
T Consensus 14 ~~~~iPvIDls~~~~~~~~~~~~~~~i~~Ace~wGfFqviNHGI~~~l~~~~~~~~~~fF~lP~eeK~k~~~-~~~~~~g 92 (322)
T KOG0143|consen 14 SELDIPVIDLSCLDSDDPGREEVVEKLREACEEWGFFQVINHGISLELLDKVKEASKEFFELPLEEKLKVAS-EPGKYRG 92 (322)
T ss_pred cCCCcCeEECCCCCCcchhHHHHHHHHHHHHHHCCeeEEEcCCCCHHHHHHHHHHHHHHhcCCHHHHHhhcc-CCCCccc
Confidence 3567999999987543 378889999999999999999999999999999999999999999999999864 3335689
Q ss_pred cccCCCCCCCCCCCceeeeeeeeecCCC-CCCC---CCCchhhccC
Q 041758 142 FNSNFDLHYSRTANWRDTLTISALASTD-LDPN---EYPEVCRYII 183 (183)
Q Consensus 142 Y~~~~~~~~~~~~dwkE~~~~~~~~P~~-~~~~---~~P~~~re~~ 183 (183)
|++.+........+|+|++.+. ..|.. ..+. ++|+.||+++
T Consensus 93 Y~~~~~~~~~~~~~w~d~~~~~-~~p~~~~~~~~wp~~p~~~re~~ 137 (322)
T KOG0143|consen 93 YGTSFILSPLKELDWRDYLTLL-SAPESSFDPNLWPEGPPEFRETM 137 (322)
T ss_pred ccccccccccccccchhheeee-ccCccccCcccCccccHHHHHHH
Confidence 9988866556789999999988 88842 2233 4578899864
No 16
>PLN03176 flavanone-3-hydroxylase; Provisional
Probab=99.93 E-value=9.2e-26 Score=168.52 Aligned_cols=112 Identities=24% Similarity=0.425 Sum_probs=90.6
Q ss_pred cHHHHHHCCCCCCCCcccCCCCCchhhhccCCCCCCcceeeCCCCCCC--cHHHHHHHHHHHHHHcceEEEEeCCCChhH
Q 041758 32 GVKGLVDAGIVNIPRIFIRPPEELVEELTSHQTNSQVPVIDLDGVRGN--KLEEIVDQVRAAAETWGFFQVVNHGIPLNV 109 (183)
Q Consensus 32 ~v~~l~~~g~~~vP~~yv~p~~~~p~~~~~~~~~~~IPvIDls~l~~~--~~~~~~~~l~~A~~~~GFF~v~nHGI~~~l 109 (183)
.|+.|... ..||+.|+++..++|... .......||||||+.+.++ .+.+++++|++||++||||||+||||+.++
T Consensus 5 ~~~~l~~~--~~~p~~~~~~~~~~p~~~-~~~~~~~iPvIDls~~~~~~~~~~~~~~~L~~A~~~~GFf~l~nhGi~~el 81 (120)
T PLN03176 5 TLTALAEE--KTLQASFVRDEDERPKVA-YNQFSNEIPVISIAGIDDGGEKRAEICNKIVEACEEWGVFQIVDHGVDAKL 81 (120)
T ss_pred HHHHHhcc--CCCCHhhcCChhhCcCcc-ccccCCCCCeEECccccCCchHHHHHHHHHHHHHHHCCEEEEECCCCCHHH
Confidence 34555443 689999999998887431 1122347999999988642 466789999999999999999999999999
Q ss_pred HHHHHHHHHHHhcCCHHHHHhhhccCCCCccccccCCC
Q 041758 110 LEEIIEGIRKFNEQDVELKKEFYTRDRARNVRFNSNFD 147 (183)
Q Consensus 110 i~~~~~~~~~FF~lp~eeK~~~~~~~~~~~~GY~~~~~ 147 (183)
++++++.+++||+||.|+|+++. ..++...||+..+.
T Consensus 82 id~~~~~~~~FF~LP~e~K~k~~-~~~~~~~gy~~~~~ 118 (120)
T PLN03176 82 VSEMTTLAKEFFALPPEEKLRFD-MSGGKKGGFIVSSH 118 (120)
T ss_pred HHHHHHHHHHHHCCCHHHHHhcc-cCCCccCCcchhcc
Confidence 99999999999999999999986 44566789987653
No 17
>PLN02750 oxidoreductase, 2OG-Fe(II) oxygenase family protein
Probab=99.93 E-value=1.4e-25 Score=194.18 Aligned_cols=118 Identities=25% Similarity=0.522 Sum_probs=95.0
Q ss_pred CCCCCcccCCCCCchhhhccCCCCCCcceeeCCCCCCCcHHHHHHHHHHHHHHcceEEEEeCCCChhHHHHHHHHHHHHh
Q 041758 42 VNIPRIFIRPPEELVEELTSHQTNSQVPVIDLDGVRGNKLEEIVDQVRAAAETWGFFQVVNHGIPLNVLEEIIEGIRKFN 121 (183)
Q Consensus 42 ~~vP~~yv~p~~~~p~~~~~~~~~~~IPvIDls~l~~~~~~~~~~~l~~A~~~~GFF~v~nHGI~~~li~~~~~~~~~FF 121 (183)
.+||..|++|++++|... .......||||||+.+...++.+++++|++||++||||||+||||+.++++++++.+++||
T Consensus 2 ~~~~~~~~~~~~~~~~~~-~~~~~~~iPvIDls~~~~~~~~~~~~~l~~Ac~~~GFf~v~nHGi~~~l~~~~~~~~~~FF 80 (345)
T PLN02750 2 GEIDPAFIQAPEHRPKFH-LTNSDEEIPVIDLSVSTSHDKTEVASKIGEACKKWGFFQVINHGVPSELRQRVEKVAKEFF 80 (345)
T ss_pred CCCCHHHcCCchhccCcc-ccccCCCCCeEECCCCCcccHHHHHHHHHHHHHhCCEEEEEcCCCCHHHHHHHHHHHHHHH
Confidence 479999999998887531 1112457999999986433577889999999999999999999999999999999999999
Q ss_pred cCCHHHHHhhhccCCCCccccccCCCCCCCCCCCceeeeeee
Q 041758 122 EQDVELKKEFYTRDRARNVRFNSNFDLHYSRTANWRDTLTIS 163 (183)
Q Consensus 122 ~lp~eeK~~~~~~~~~~~~GY~~~~~~~~~~~~dwkE~~~~~ 163 (183)
+||.|+|+++. .......||.... ...+..||+|.|.++
T Consensus 81 ~LP~eeK~~~~-~~~~~~~GY~~~~--~~~~~~d~kE~~~~~ 119 (345)
T PLN02750 81 DQTTEEKRKVK-RDEVNPMGYHDSE--HTKNIRDWKEVFDFL 119 (345)
T ss_pred cCCHHHHHhhc-cCCCCccCcCccc--ccccCCCceeEEEEe
Confidence 99999999985 3444457996432 123456999999987
No 18
>PTZ00273 oxidase reductase; Provisional
Probab=99.90 E-value=8.4e-24 Score=181.28 Aligned_cols=118 Identities=25% Similarity=0.433 Sum_probs=92.0
Q ss_pred CCCcceeeCCCCCCC---cHHHHHHHHHHHHHHcceEEEEeCCCChhHHHHHHHHHHHHhcCCHHHHHhhhccCCCCccc
Q 041758 65 NSQVPVIDLDGVRGN---KLEEIVDQVRAAAETWGFFQVVNHGIPLNVLEEIIEGIRKFNEQDVELKKEFYTRDRARNVR 141 (183)
Q Consensus 65 ~~~IPvIDls~l~~~---~~~~~~~~l~~A~~~~GFF~v~nHGI~~~li~~~~~~~~~FF~lp~eeK~~~~~~~~~~~~G 141 (183)
...||||||+.+.++ .+.+++++|++||++||||||+||||+.++++++++.+++||+||.|+|+++........+|
T Consensus 3 ~~~iPvIDl~~~~~~~~~~~~~~~~~l~~A~~~~Gff~v~nhgi~~~l~~~~~~~~~~fF~lP~e~K~~~~~~~~~~~~G 82 (320)
T PTZ00273 3 RASLPVIDVSPLFGGESAEKMRVAKQIDEACRTWGFFYIVGHPIPQERIEKVLKMAKTFFSLPMEEKLKIDIRKSRLHRG 82 (320)
T ss_pred CCCCCEEecHHhcCCChHHHHHHHHHHHHHHHhCCEEEEECCCCCHHHHHHHHHHHHHHHcCCHHHHhhhccCCCCCCCC
Confidence 347999999988642 46778999999999999999999999999999999999999999999999986544445679
Q ss_pred cccCCC--CCCCCCCCceeeeeeeeec-CCC----------CCCCCCC---chhhccC
Q 041758 142 FNSNFD--LHYSRTANWRDTLTISALA-STD----------LDPNEYP---EVCRYII 183 (183)
Q Consensus 142 Y~~~~~--~~~~~~~dwkE~~~~~~~~-P~~----------~~~~~~P---~~~re~~ 183 (183)
|+.... .......||+|.|.++ +. |.. ..++.|| +.||+++
T Consensus 83 Y~~~~~e~~~~~~~~d~kE~~~~~-~~~~~~~~~~~~~~~~~~~n~wP~~~p~fr~~~ 139 (320)
T PTZ00273 83 YGAFGAEQLDPSKPYDYKETFDMG-CHLPKDHPDVMAGKPLRGPNNHPTQVEGWMELM 139 (320)
T ss_pred CCCccccccCCCCCCCccceEEee-ccCCcccchhhccccccCCCCCCCcchHHHHHH
Confidence 976432 2234567999999987 43 311 1245776 4588753
No 19
>PLN02485 oxidoreductase
Probab=99.89 E-value=5.6e-23 Score=176.84 Aligned_cols=116 Identities=21% Similarity=0.301 Sum_probs=88.7
Q ss_pred CCcceeeCCCCCC---------C-cHHHHHHHHHHHHHHcceEEEEeCCCChhHHHHHHHHHHHHhcCCHHHHHhhhccC
Q 041758 66 SQVPVIDLDGVRG---------N-KLEEIVDQVRAAAETWGFFQVVNHGIPLNVLEEIIEGIRKFNEQDVELKKEFYTRD 135 (183)
Q Consensus 66 ~~IPvIDls~l~~---------~-~~~~~~~~l~~A~~~~GFF~v~nHGI~~~li~~~~~~~~~FF~lp~eeK~~~~~~~ 135 (183)
..||||||+.+.. + .+.+++++|++||++||||||+||||+.++++++++.+++||+||.|+|+++....
T Consensus 6 ~~iPvIDl~~l~~~~~~~~~~~~~~~~~~~~~l~~Ac~~~GFf~l~nHGi~~~l~~~~~~~~~~FF~lP~e~K~~~~~~~ 85 (329)
T PLN02485 6 KSIPVIDISPLVAKCDDPDMAEDPDVAEVVRQLDKACRDAGFFYVKGHGISDSLIKKVREVTHEFFELPYEEKLKIKMTP 85 (329)
T ss_pred CCCCeEechhhhccCcccccccchHHHHHHHHHHHHHHHCCEEEEECCCCCHHHHHHHHHHHHHHHcCCHHHHHhhcccC
Confidence 4699999998742 1 35678999999999999999999999999999999999999999999999986433
Q ss_pred CCCccccccCCCCCCCCCCCceeeeeeeeec--CC--------CCCCCCCC---chhhcc
Q 041758 136 RARNVRFNSNFDLHYSRTANWRDTLTISALA--ST--------DLDPNEYP---EVCRYI 182 (183)
Q Consensus 136 ~~~~~GY~~~~~~~~~~~~dwkE~~~~~~~~--P~--------~~~~~~~P---~~~re~ 182 (183)
.....||.........+..||+|.|.+. .. +. ...++.|| +.||++
T Consensus 86 ~~~~rGY~~~g~~~~~~~~d~~E~~~~~-~~~~~~~~~~~~~~~~~~n~wP~~~~~fr~~ 144 (329)
T PLN02485 86 AAGYRGYQRIGENVTKGKPDMHEAIDCY-REFKPGKYGDLGKVMEGPNQWPENPQEFKAL 144 (329)
T ss_pred CCCCCCcccccccccCCCCCcchhhhhc-ccCCCCcccccccccCCCCCCCCccHHHHHH
Confidence 3345799654332234567999999876 31 11 01245777 568875
No 20
>PLN02997 flavonol synthase
Probab=99.89 E-value=7.8e-23 Score=175.89 Aligned_cols=110 Identities=27% Similarity=0.457 Sum_probs=88.0
Q ss_pred CCCcceeeCCCCCCCcHHHHHHHHHHHHHHcceEEEEeCCCChhHHHHHHHHHHHHhcCCHHHHHhhhccCCCCcccccc
Q 041758 65 NSQVPVIDLDGVRGNKLEEIVDQVRAAAETWGFFQVVNHGIPLNVLEEIIEGIRKFNEQDVELKKEFYTRDRARNVRFNS 144 (183)
Q Consensus 65 ~~~IPvIDls~l~~~~~~~~~~~l~~A~~~~GFF~v~nHGI~~~li~~~~~~~~~FF~lp~eeK~~~~~~~~~~~~GY~~ 144 (183)
...||||||+.+ ++.+++++|++||++||||||+||||+.++++++++++++||+||.|+|+++.. .....||..
T Consensus 30 ~~~IPvIDls~~---~~~~~~~~l~~Ac~~~GFF~v~nHGI~~~li~~~~~~~~~FF~LP~eeK~k~~~--~~~~~GY~~ 104 (325)
T PLN02997 30 AVDVPVVDLSVS---DEDFLVREVVKASEEWGVFQVVNHGIPTELMRQLQMVGKQFFELPEAEKETVAK--EEDFEGYKR 104 (325)
T ss_pred CCCCCeEECCCC---CHHHHHHHHHHHHHHCCEEEEECCCCCHHHHHHHHHHHHHHHcCCHHHHhhhcc--CCCccccCc
Confidence 457999999976 356789999999999999999999999999999999999999999999999753 234679975
Q ss_pred CCCCCCCCCCCceeeeeeeeecCCC-CCCCCCC---chhhccC
Q 041758 145 NFDLHYSRTANWRDTLTISALASTD-LDPNEYP---EVCRYII 183 (183)
Q Consensus 145 ~~~~~~~~~~dwkE~~~~~~~~P~~-~~~~~~P---~~~re~~ 183 (183)
.. ..+..+|+|.+... ..|.. ...+.|| +.||+++
T Consensus 105 ~~---~~~~~d~~e~~~~~-~~p~~~~~~n~wP~~~~~fr~~~ 143 (325)
T PLN02997 105 NY---LGGINNWDEHLFHR-LSPPSIINYKYWPKNPPQYREVT 143 (325)
T ss_pred cc---ccCCCCccceeEee-ecCccccccccCCCCcchHHHHH
Confidence 43 24567999988766 55632 2234565 6788763
No 21
>PLN02299 1-aminocyclopropane-1-carboxylate oxidase
Probab=99.88 E-value=7.7e-23 Score=175.64 Aligned_cols=111 Identities=19% Similarity=0.417 Sum_probs=86.5
Q ss_pred CCCcceeeCCCCCCCcHHHHHHHHHHHHHHcceEEEEeCCCChhHHHHHHHHHHHHhcCCHHHHHhhhccCCCCcccccc
Q 041758 65 NSQVPVIDLDGVRGNKLEEIVDQVRAAAETWGFFQVVNHGIPLNVLEEIIEGIRKFNEQDVELKKEFYTRDRARNVRFNS 144 (183)
Q Consensus 65 ~~~IPvIDls~l~~~~~~~~~~~l~~A~~~~GFF~v~nHGI~~~li~~~~~~~~~FF~lp~eeK~~~~~~~~~~~~GY~~ 144 (183)
...||+|||+.+.++++.+++++|++||++||||||+|||||.++++++++.+++||+||.|+|+++.. . ..||.+
T Consensus 4 ~~~iPvIDls~~~~~~~~~~~~~l~~A~~~~GFF~v~nHGI~~~l~~~~~~~~~~fF~LP~e~K~~~~~-~---~~gy~~ 79 (321)
T PLN02299 4 MESFPVIDMEKLNGEERAATMELIKDACENWGFFELVNHGISHELMDEVEKMTKEHYKKCMEQRFKEMV-A---SKGLEG 79 (321)
T ss_pred CCCCCEEECcCCCcccHHHHHHHHHHHHHhcCEEEEECCCCCHHHHHHHHHHHHHHhCCCHHHHHhccc-C---CCCccc
Confidence 356999999988544567789999999999999999999999999999999999999999999999642 2 356753
Q ss_pred CCCCCCCCCCCceeeeeeeeecCCCCCCCCC---CchhhccC
Q 041758 145 NFDLHYSRTANWRDTLTISALASTDLDPNEY---PEVCRYII 183 (183)
Q Consensus 145 ~~~~~~~~~~dwkE~~~~~~~~P~~~~~~~~---P~~~re~~ 183 (183)
.. ...+..||+|.|.+. ..|.. ..+.| |+.||+++
T Consensus 80 ~~--~~~~~~d~ke~~~~~-~~~~~-~~~~wP~~~~~fr~~~ 117 (321)
T PLN02299 80 VQ--TEVEDLDWESTFFLR-HLPES-NLADIPDLDDEYRKVM 117 (321)
T ss_pred cc--ccCCCcCHHHHcccc-cCCcc-ccccCccccHHHHHHH
Confidence 32 123457999999987 56642 12234 57788763
No 22
>PLN03002 oxidoreductase, 2OG-Fe(II) oxygenase family protein
Probab=99.88 E-value=2.3e-22 Score=173.36 Aligned_cols=94 Identities=24% Similarity=0.401 Sum_probs=77.6
Q ss_pred CCCcceeeCCCCCCCcHHHHHHHHHHHHHHcceEEEEeCCCChhHHHHHHHHHHHHhcCCHHHHHhhhccCCCCcccccc
Q 041758 65 NSQVPVIDLDGVRGNKLEEIVDQVRAAAETWGFFQVVNHGIPLNVLEEIIEGIRKFNEQDVELKKEFYTRDRARNVRFNS 144 (183)
Q Consensus 65 ~~~IPvIDls~l~~~~~~~~~~~l~~A~~~~GFF~v~nHGI~~~li~~~~~~~~~FF~lp~eeK~~~~~~~~~~~~GY~~ 144 (183)
...||+|||+.. .+..++++|++||++||||||+||||+.++++++++.+++||+||.|+|+++. .. ...+||+.
T Consensus 12 ~~~iP~IDl~~~---~~~~~~~~l~~Ac~~~GFf~l~nHGI~~~l~~~~~~~~~~FF~LP~e~K~k~~-~~-~~~~GY~~ 86 (332)
T PLN03002 12 VSSLNCIDLAND---DLNHSVASLKQACLDCGFFYVINHGINEEFMDDVFEQSKKFFALPLEEKMKVL-RN-EKHRGYTP 86 (332)
T ss_pred CCCCCEEeCCch---hHHHHHHHHHHHHHhCCEEEEeCCCCCHHHHHHHHHHHHHHHcCCHHHHHhhc-cC-CCCCCcCc
Confidence 347999999963 45678999999999999999999999999999999999999999999999985 33 34689975
Q ss_pred CCCCC----CCCCCCceeeeeee
Q 041758 145 NFDLH----YSRTANWRDTLTIS 163 (183)
Q Consensus 145 ~~~~~----~~~~~dwkE~~~~~ 163 (183)
..... .....||+|.|.++
T Consensus 87 ~~~e~~~~~~~~~~d~kE~f~~~ 109 (332)
T PLN03002 87 VLDEKLDPKNQINGDHKEGYYIG 109 (332)
T ss_pred ccccccccccCCCCcceeeeEec
Confidence 43211 11237999999987
No 23
>PLN02156 gibberellin 2-beta-dioxygenase
Probab=99.87 E-value=5e-22 Score=171.53 Aligned_cols=108 Identities=20% Similarity=0.338 Sum_probs=82.9
Q ss_pred CCCcceeeCCCCCCCcHHHHHHHHHHHHHHcceEEEEeCCCChhHHHHHHHHHHHHhcCCHHHHHhhhccCCCCcccccc
Q 041758 65 NSQVPVIDLDGVRGNKLEEIVDQVRAAAETWGFFQVVNHGIPLNVLEEIIEGIRKFNEQDVELKKEFYTRDRARNVRFNS 144 (183)
Q Consensus 65 ~~~IPvIDls~l~~~~~~~~~~~l~~A~~~~GFF~v~nHGI~~~li~~~~~~~~~FF~lp~eeK~~~~~~~~~~~~GY~~ 144 (183)
...||||||+.. +..++|++||++||||||+||||+.++++++++.+++||+||.|+|+++.. ....||+.
T Consensus 24 ~~~iPvIDls~~------~~~~~l~~Ac~~~GFF~v~nHGI~~~li~~~~~~~~~FF~LP~e~K~~~~~---~~~~Gy~~ 94 (335)
T PLN02156 24 PVLIPVIDLTDS------DAKTQIVKACEEFGFFKVINHGVRPDLLTQLEQEAIGFFALPHSLKDKAGP---PDPFGYGT 94 (335)
T ss_pred CCCCCcccCCCh------HHHHHHHHHHHHCCEEEEECCCCCHHHHHHHHHHHHHHHcCCHHHHhhcCC---CCCcccCc
Confidence 346999999852 246799999999999999999999999999999999999999999999742 23458865
Q ss_pred CCCCCCCCCCCceeeeeeeeecCCCC---CCCCC---CchhhccC
Q 041758 145 NFDLHYSRTANWRDTLTISALASTDL---DPNEY---PEVCRYII 183 (183)
Q Consensus 145 ~~~~~~~~~~dwkE~~~~~~~~P~~~---~~~~~---P~~~re~~ 183 (183)
... ......+|+|.|.+. ..|... .++.| |+.||+++
T Consensus 95 ~~~-~~~~~~~~~e~~~~~-~~~~~~~~~~~~~wp~~p~~fr~~~ 137 (335)
T PLN02156 95 KRI-GPNGDVGWLEYILLN-ANLCLESHKTTAVFRHTPAIFREAV 137 (335)
T ss_pred ccc-CCCCCCCceeeEeee-cCCccccccchhcCccccHHHHHHH
Confidence 432 223356999999988 665321 13455 46788763
No 24
>COG3491 PcbC Isopenicillin N synthase and related dioxygenases [General function prediction only]
Probab=99.86 E-value=6.1e-22 Score=166.76 Aligned_cols=99 Identities=23% Similarity=0.394 Sum_probs=85.7
Q ss_pred CCCcceeeCCCCCCC---cHHHHHHHHHHHHHHcceEEEEeCCCChhHHHHHHHHHHHHhcCCHHHHHhhhccCCCCccc
Q 041758 65 NSQVPVIDLDGVRGN---KLEEIVDQVRAAAETWGFFQVVNHGIPLNVLEEIIEGIRKFNEQDVELKKEFYTRDRARNVR 141 (183)
Q Consensus 65 ~~~IPvIDls~l~~~---~~~~~~~~l~~A~~~~GFF~v~nHGI~~~li~~~~~~~~~FF~lp~eeK~~~~~~~~~~~~G 141 (183)
...||+|||+.+... ++..++++|++||++||||||+||||+..+++++++.+++||+||.|||+++.+.......|
T Consensus 3 ~~~lp~idls~~~~~~~~~~~~~~~~l~~A~r~~GFf~l~~~~i~~~~~~~~~~~arqFFaLp~eeK~~~~~~~~~~~rG 82 (322)
T COG3491 3 TRDLPIIDLSELAGSDPGARRRVAQELRAACREIGFFYLVNHGIDAALIDEAFALARQFFALPVEEKLKILMVLGRQHRG 82 (322)
T ss_pred CCcCceeccHHhcCCCcHHHHHHHHHHHHHHHhCCEEEEeCCCCCHHHHHHHHHHHHHHhcCCHHHHHHHHHhcCccccc
Confidence 357999999998652 78999999999999999999999999999999999999999999999999987554345789
Q ss_pred cccCCCCCCCCCCCceeeeeee
Q 041758 142 FNSNFDLHYSRTANWRDTLTIS 163 (183)
Q Consensus 142 Y~~~~~~~~~~~~dwkE~~~~~ 163 (183)
|.........+..||||.|+++
T Consensus 83 Y~~~~~E~t~g~~d~kE~~d~g 104 (322)
T COG3491 83 YTPHGGELTDGEPDYKEGLDMG 104 (322)
T ss_pred cccCcccccCCccchhhhcccc
Confidence 9876544455566999999988
No 25
>PLN02403 aminocyclopropanecarboxylate oxidase
Probab=99.86 E-value=6.6e-22 Score=168.68 Aligned_cols=108 Identities=27% Similarity=0.500 Sum_probs=81.6
Q ss_pred CcceeeCCCCCCCcHHHHHHHHHHHHHHcceEEEEeCCCChhHHHHHHHHHHHHhcCCHHHHHhhhccCCCCccccccCC
Q 041758 67 QVPVIDLDGVRGNKLEEIVDQVRAAAETWGFFQVVNHGIPLNVLEEIIEGIRKFNEQDVELKKEFYTRDRARNVRFNSNF 146 (183)
Q Consensus 67 ~IPvIDls~l~~~~~~~~~~~l~~A~~~~GFF~v~nHGI~~~li~~~~~~~~~FF~lp~eeK~~~~~~~~~~~~GY~~~~ 146 (183)
.||||||+.+....+.+++++|++||++||||||+||||+.++++++++.++.||+||.|+|. + ..... .++...
T Consensus 2 ~iPvIDls~~~~~~~~~~~~~l~~Ac~~~GFf~v~nHGI~~~l~~~~~~~~~~FF~LP~e~k~-~-~~~~~--~~~~~~- 76 (303)
T PLN02403 2 EIPVIDFDQLDGEKRSKTMSLLHQACEKWGFFQVENHGIDKKLMEKVKQLVNSHYEENLKESF-Y-ESEIA--KALDNE- 76 (303)
T ss_pred CCCeEeCccCCcccHHHHHHHHHHHHHhCceEEEECCCCCHHHHHHHHHHHHHHhcCCHHHHh-h-ccccc--Cccccc-
Confidence 599999998754357789999999999999999999999999999999999999999999985 2 22211 122111
Q ss_pred CCCCCCCCCceeeeeeeeecCCCCCCCCC---CchhhccC
Q 041758 147 DLHYSRTANWRDTLTISALASTDLDPNEY---PEVCRYII 183 (183)
Q Consensus 147 ~~~~~~~~dwkE~~~~~~~~P~~~~~~~~---P~~~re~~ 183 (183)
......||+|.|.++ ..|.. .++.| |+.||+++
T Consensus 77 --~~~~~~d~kE~~~~~-~~p~~-~~~~wP~~~p~fr~~~ 112 (303)
T PLN02403 77 --GKTSDVDWESSFFIW-HRPTS-NINEIPNLSEDLRKTM 112 (303)
T ss_pred --CCCCCccHhhhcccc-cCCcc-chhhCCCCcHHHHHHH
Confidence 123457999999988 67742 12234 46788763
No 26
>PLN02984 oxidoreductase, 2OG-Fe(II) oxygenase family protein
Probab=99.85 E-value=6.7e-21 Score=164.85 Aligned_cols=111 Identities=23% Similarity=0.444 Sum_probs=77.4
Q ss_pred CCCcceeeCCCCCCCcHHHHHHHHHHHHHHcceEEEEeCCCChhHHHHHHHHHHHHhcCCHHHHHhhhccCCCCcccccc
Q 041758 65 NSQVPVIDLDGVRGNKLEEIVDQVRAAAETWGFFQVVNHGIPLNVLEEIIEGIRKFNEQDVELKKEFYTRDRARNVRFNS 144 (183)
Q Consensus 65 ~~~IPvIDls~l~~~~~~~~~~~l~~A~~~~GFF~v~nHGI~~~li~~~~~~~~~FF~lp~eeK~~~~~~~~~~~~GY~~ 144 (183)
...||+|||+.+ .+++|++||++||||||+||||+.++++++++.+++||+||.|+|+++.........+|+.
T Consensus 36 ~~~IPvIDls~~-------~~~~l~~A~~~~GFF~v~nHGI~~~li~~~~~~s~~FF~LP~eeK~k~~~~~~~~~~~~g~ 108 (341)
T PLN02984 36 DIDIPVIDMECL-------DMEKLREACKDWGIFRLENHGIPLTLMSQLKEISESLLSLPFESKRELFGVNSPLSYFWGT 108 (341)
T ss_pred cCCCCeEeCcHH-------HHHHHHHHHHhCcEEEEECCCCCHHHHHHHHHHHHHHHcCCHHHHhhhcccCCCCccccCc
Confidence 446999999865 3489999999999999999999999999999999999999999999975222111112221
Q ss_pred C--CCC-----C--CCCCCCceeeeeeeeecCCC---CCCCCC--CchhhccC
Q 041758 145 N--FDL-----H--YSRTANWRDTLTISALASTD---LDPNEY--PEVCRYII 183 (183)
Q Consensus 145 ~--~~~-----~--~~~~~dwkE~~~~~~~~P~~---~~~~~~--P~~~re~~ 183 (183)
. ... . .....||+|+|.+. ..+.. .++..+ ++.||+++
T Consensus 109 ~~~~~~~~~~~~~~~~~~~D~kE~f~~~-~~~~~~~~~~p~~~~~~p~fr~~~ 160 (341)
T PLN02984 109 PALTPSGKALSRGPQESNVNWVEGFNIP-LSSLSLLQTLSCSDPKLESFRVLM 160 (341)
T ss_pred ccccccccccccccccCCCCeeeEEeCc-CCchhhhhhcCCCCCccHHHHHHH
Confidence 1 100 0 12257999999987 54321 122222 35788753
No 27
>PLN02365 2-oxoglutarate-dependent dioxygenase
Probab=99.83 E-value=1.9e-20 Score=159.40 Aligned_cols=86 Identities=24% Similarity=0.453 Sum_probs=70.5
Q ss_pred CCcceeeCCCCCCCcHHHHHHHHHHHHHHcceEEEEeCCCChhHHHHHHHHHHHHhcCCHHHHHhhhccCCCCccccccC
Q 041758 66 SQVPVIDLDGVRGNKLEEIVDQVRAAAETWGFFQVVNHGIPLNVLEEIIEGIRKFNEQDVELKKEFYTRDRARNVRFNSN 145 (183)
Q Consensus 66 ~~IPvIDls~l~~~~~~~~~~~l~~A~~~~GFF~v~nHGI~~~li~~~~~~~~~FF~lp~eeK~~~~~~~~~~~~GY~~~ 145 (183)
..||||||+.+. ..+++|++||++||||||+||||+.++++++++.+++||+||.|+|+++.. .....||...
T Consensus 4 ~~iPvIDls~~~-----~~~~~l~~Ac~~~GfF~l~nHGi~~~l~~~~~~~~~~FF~LP~e~K~~~~~--~~~~~GY~~~ 76 (300)
T PLN02365 4 VNIPTIDLEEFP-----GQIEKLREACERWGCFRVVNHGVSLSLMAEMKKVVRSLFDLPDEVKRRNTD--VILGSGYMAP 76 (300)
T ss_pred CCCCEEEChhhH-----HHHHHHHHHHHHCCEEEEEcCCCCHHHHHHHHHHHHHHHcCCHHHHhhccC--CCCCCCCCCc
Confidence 469999999862 245899999999999999999999999999999999999999999999642 2335688754
Q ss_pred CCCCCCCCCCceeeeeee
Q 041758 146 FDLHYSRTANWRDTLTIS 163 (183)
Q Consensus 146 ~~~~~~~~~dwkE~~~~~ 163 (183)
. ...+|+|.|.+.
T Consensus 77 ~-----~~~~~~e~~~~~ 89 (300)
T PLN02365 77 S-----EVNPLYEALGLY 89 (300)
T ss_pred C-----CCCCchhheecc
Confidence 2 224688888765
No 28
>PLN03001 oxidoreductase, 2OG-Fe(II) oxygenase family protein
Probab=98.46 E-value=1.6e-07 Score=78.76 Aligned_cols=70 Identities=17% Similarity=0.237 Sum_probs=47.7
Q ss_pred HHHHHHHHhc-CCHHHHHhhhccC-CCCccccccCCCC--CCCCCCCceeeeeeeeecCCC-CCCCCCC---chhhccC
Q 041758 113 IIEGIRKFNE-QDVELKKEFYTRD-RARNVRFNSNFDL--HYSRTANWRDTLTISALASTD-LDPNEYP---EVCRYII 183 (183)
Q Consensus 113 ~~~~~~~FF~-lp~eeK~~~~~~~-~~~~~GY~~~~~~--~~~~~~dwkE~~~~~~~~P~~-~~~~~~P---~~~re~~ 183 (183)
|++.+++||+ ||.|+|+++.... ....+||+..... ...+..||+|+|.+. .+|.. ..++.|| +.||+++
T Consensus 1 ~~~~~~~FF~~LP~eeK~~~~~~~~~~~~~GY~~~~~~~~~~~~~~d~kE~~~~~-~~p~~~~~~n~wP~~~~~f~~~~ 78 (262)
T PLN03001 1 MRSLGLSFFKDSPMEEKLRYACDPGSAASEGYGSRMLLGAKDDTVLDWRDFFDHH-TFPLSRRNPSHWPDFPPDYREVV 78 (262)
T ss_pred ChHHHHHHHhhCCHHHHHHhhcCCCCCCccccccccccccCCCCccCchheeEee-ecCccccchhhCCCCcHHHHHHH
Confidence 4678999997 9999999986422 1235699655432 234467999999987 77742 2345565 6788753
No 29
>PF07350 DUF1479: Protein of unknown function (DUF1479); InterPro: IPR010856 This family consists of several hypothetical Enterobacterial proteins, of around 420 residues in length. Members of this family are often known as YbiU. The function of this family is unknown.; PDB: 2CSG_A 2DBI_A 2DBN_A.
Probab=73.74 E-value=2.6 Score=37.91 Aligned_cols=57 Identities=12% Similarity=0.247 Sum_probs=40.4
Q ss_pred CCCCCcceeeCCCCCCCcHHHHHHHHHHHHHHcceEEEEeCCCChhHHHHHHHHHHHHhcC
Q 041758 63 QTNSQVPVIDLDGVRGNKLEEIVDQVRAAAETWGFFQVVNHGIPLNVLEEIIEGIRKFNEQ 123 (183)
Q Consensus 63 ~~~~~IPvIDls~l~~~~~~~~~~~l~~A~~~~GFF~v~nHGI~~~li~~~~~~~~~FF~l 123 (183)
.+...||.||++++.. ....++.....++.|++.|.|+ ||.+......+..++|.+.
T Consensus 45 ~G~~~IP~i~f~di~~---~~~~~~~~~~ir~rG~~VIR~V-vp~~ea~~w~~e~~~Y~~~ 101 (416)
T PF07350_consen 45 KGSSIIPEIDFADIEN---GGVSEEFLAEIRRRGCVVIRGV-VPREEALAWKQELKEYLKA 101 (416)
T ss_dssp CT--SS-EEEHHHHHC---T---HHHHHHHHHHSEEEECTS-S-HHHHHHHHHHHHHHHHH
T ss_pred hCCCCCceeeHHHHhC---CCCCHHHHHHHHhcCEEEEeCC-CCHHHHHHHHHHHHHHHHh
Confidence 4456799999998843 2355788888999999988887 9998888888888887643
No 30
>PRK08130 putative aldolase; Validated
Probab=69.66 E-value=6.4 Score=31.72 Aligned_cols=36 Identities=22% Similarity=0.283 Sum_probs=29.3
Q ss_pred CcceeeCCCCCCCcHHHHHHHHHHHHHHcceEEEEeCCC
Q 041758 67 QVPVIDLDGVRGNKLEEIVDQVRAAAETWGFFQVVNHGI 105 (183)
Q Consensus 67 ~IPvIDls~l~~~~~~~~~~~l~~A~~~~GFF~v~nHGI 105 (183)
.||++++... ...+.++.+.+++++...+.+.|||+
T Consensus 127 ~i~v~~y~~~---g~~~la~~~~~~l~~~~~vll~nHGv 162 (213)
T PRK08130 127 HVPLIPYYRP---GDPAIAEALAGLAARYRAVLLANHGP 162 (213)
T ss_pred ccceECCCCC---ChHHHHHHHHHHhccCCEEEEcCCCC
Confidence 5899887654 24577888999999999999999995
No 31
>PRK08333 L-fuculose phosphate aldolase; Provisional
Probab=68.32 E-value=6.4 Score=30.93 Aligned_cols=36 Identities=22% Similarity=0.433 Sum_probs=28.9
Q ss_pred CcceeeCCCCCCCcHHHHHHHHHHHHHHcceEEEEeCCC
Q 041758 67 QVPVIDLDGVRGNKLEEIVDQVRAAAETWGFFQVVNHGI 105 (183)
Q Consensus 67 ~IPvIDls~l~~~~~~~~~~~l~~A~~~~GFF~v~nHGI 105 (183)
.||+++.... ...+.++++.+++++..-+.+.|||+
T Consensus 120 ~v~v~~~~~~---g~~~la~~~~~~l~~~~~vll~nHGv 155 (184)
T PRK08333 120 KIPILPFRPA---GSVELAEQVAEAMKEYDAVIMERHGI 155 (184)
T ss_pred CEeeecCCCC---CcHHHHHHHHHHhccCCEEEEcCCCC
Confidence 5899887653 23567888888888888999999996
No 32
>PRK05874 L-fuculose-phosphate aldolase; Validated
Probab=57.10 E-value=12 Score=30.41 Aligned_cols=36 Identities=19% Similarity=0.205 Sum_probs=28.7
Q ss_pred CcceeeCCCCCCCcHHHHHHHHHHHHHHcceEEEEeCCC
Q 041758 67 QVPVIDLDGVRGNKLEEIVDQVRAAAETWGFFQVVNHGI 105 (183)
Q Consensus 67 ~IPvIDls~l~~~~~~~~~~~l~~A~~~~GFF~v~nHGI 105 (183)
.+|++++... ...+.++.+.+++.+...+.|.|||+
T Consensus 127 ~v~~~~y~~~---gs~ela~~v~~~l~~~~~vlL~nHGv 162 (217)
T PRK05874 127 DVRCTEYAAS---GTPEVGRNAVRALEGRAAALIANHGL 162 (217)
T ss_pred ceeeecCCCC---CcHHHHHHHHHHhCcCCEEEEcCCCC
Confidence 4777777643 23578889999999999999999996
No 33
>PRK08660 L-fuculose phosphate aldolase; Provisional
Probab=51.49 E-value=20 Score=28.04 Aligned_cols=35 Identities=23% Similarity=0.295 Sum_probs=26.9
Q ss_pred CcceeeCCCCCCCcHHHHHHHHHHHHHHcceEEEEeCCC
Q 041758 67 QVPVIDLDGVRGNKLEEIVDQVRAAAETWGFFQVVNHGI 105 (183)
Q Consensus 67 ~IPvIDls~l~~~~~~~~~~~l~~A~~~~GFF~v~nHGI 105 (183)
.||++ .... ...+.++.+.+++.+.-.+.+-|||+
T Consensus 115 ~ipv~-~~~~---~~~~la~~v~~~l~~~~~vll~nHG~ 149 (181)
T PRK08660 115 TIPVV-GGDI---GSGELAENVARALSEHKGVVVRGHGT 149 (181)
T ss_pred CEeEE-eCCC---CCHHHHHHHHHHHhhCCEEEEcCCCc
Confidence 58988 3332 23567788888999989999999995
No 34
>PRK06833 L-fuculose phosphate aldolase; Provisional
Probab=50.81 E-value=19 Score=28.97 Aligned_cols=36 Identities=19% Similarity=0.274 Sum_probs=27.0
Q ss_pred CcceeeCCCCCCCcHHHHHHHHHHHHHHcceEEEEeCCC
Q 041758 67 QVPVIDLDGVRGNKLEEIVDQVRAAAETWGFFQVVNHGI 105 (183)
Q Consensus 67 ~IPvIDls~l~~~~~~~~~~~l~~A~~~~GFF~v~nHGI 105 (183)
.||++.+... ...+.++.+.+++.+...+.+-|||+
T Consensus 124 ~i~~~~y~~~---gs~~la~~v~~~l~~~~~vll~nHGv 159 (214)
T PRK06833 124 NVRCAEYATF---GTKELAENAFEAMEDRRAVLLANHGL 159 (214)
T ss_pred CeeeccCCCC---ChHHHHHHHHHHhCcCCEEEECCCCC
Confidence 4777665433 24567788888888889999999996
No 35
>COG1402 Uncharacterized protein, putative amidase [General function prediction only]
Probab=48.35 E-value=51 Score=27.61 Aligned_cols=42 Identities=26% Similarity=0.350 Sum_probs=31.9
Q ss_pred HHHHHHHHHHHHHHcce--EEEEe-CCCChhHHHHHHHHHHHHhc
Q 041758 81 LEEIVDQVRAAAETWGF--FQVVN-HGIPLNVLEEIIEGIRKFNE 122 (183)
Q Consensus 81 ~~~~~~~l~~A~~~~GF--F~v~n-HGI~~~li~~~~~~~~~FF~ 122 (183)
-...+..+.+.+..+|| |.++| ||=....+..+.+..+..|.
T Consensus 88 ~~~~~~~~~~Sl~~~Gfrk~v~vNgHGGN~~~l~~v~~el~~~~~ 132 (250)
T COG1402 88 LIALLVELVESLARHGFRKFVIVNGHGGNSAALEIVARELRAELG 132 (250)
T ss_pred HHHHHHHHHHHHHhcCccEEEEEecCCCcHHHHHHHHHHHHHhcc
Confidence 45677889999999999 77776 88777777777776665554
No 36
>cd00379 Ribosomal_L10_P0 Ribosomal protein L10 family; composed of the large subunit ribosomal protein called L10 in bacteria, P0 in eukaryotes, and L10e in archaea, as well as uncharacterized P0-like eukaryotic proteins. In all three kingdoms, L10 forms a tight complex with multiple copies of the small acidic protein L12(e). This complex forms a stalk structure on the large subunit of the ribosome. The N-terminal domain (NTD) of L10 interacts with L11 protein and forms the base of the L7/L12 stalk, while the extended C-terminal helix binds to two or three dimers of the NTD of L7/L12 (L7 and L12 are identical except for an acetylated N-terminus). The L7/L12 stalk is known to contain the binding site for elongation factors G and Tu (EF-G and EF-Tu, respectively); however, there is disagreement as to whether or not L10 is involved in forming the binding site. The stalk is believed to be associated with GTPase activities in protein synthesis. In a neuroblastoma cell line, L10 has been sho
Probab=47.92 E-value=71 Score=23.85 Aligned_cols=39 Identities=23% Similarity=0.463 Sum_probs=31.6
Q ss_pred HHHHHHHHHHHHHHcceEEEEe-CCCChhHHHHHHHHHHH
Q 041758 81 LEEIVDQVRAAAETWGFFQVVN-HGIPLNVLEEIIEGIRK 119 (183)
Q Consensus 81 ~~~~~~~l~~A~~~~GFF~v~n-HGI~~~li~~~~~~~~~ 119 (183)
....++++...++++.++++++ +|++...+.+++...+.
T Consensus 3 K~~~v~~l~~~l~~~~~v~v~~~~~l~~~~~~~lR~~l~~ 42 (155)
T cd00379 3 KEELVEELKELLKKYKSVVVVDYRGLTVAQLTELRKELRE 42 (155)
T ss_pred hHHHHHHHHHHHHhCCEEEEEecCCCcHHHHHHHHHHHHH
Confidence 3567889999999998888887 46888888888887665
No 37
>PF03460 NIR_SIR_ferr: Nitrite/Sulfite reductase ferredoxin-like half domain; InterPro: IPR005117 Sulphite reductases (SiRs) and related nitrite reductases (NiRs) catalyse the six-electron reduction reactions of sulphite to sulphide, and nitrite to ammonia, respectively. The Escherichia coli SiR enzyme is a complex composed of two proteins, a flavoprotein alpha-component (SiR-FP) and a hemoprotein beta-component (SiR-HP), and has an alpha(8)beta(4) quaternary structure []. SiR-FP contains both FAD and FMN, while SiR-HP contains a Fe(4)S(4) cluster coupled to a sirohaem through a cysteine bridge. Electrons are transferred from NADPH to FAD, and on to FMN in SiR-FP, from which they are transferred to the metal centre of SiR-HP, where they reduce the siroheme-bound sulphite. SiR-HP has a two-fold symmetry, which generates a distinctive three-domain alpha/beta fold that controls assembly and reactivity []. This entry describes the ferrodoxin-like (alpha/beta sandwich) domain, which consists of a duplication containing two subdomains of this fold.; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 3B0H_A 4GEP_A 2GEP_A 2AOP_A 5AOP_A 6GEP_A 4AOP_A 1AOP_A 3AOP_A 8GEP_A ....
Probab=47.15 E-value=34 Score=22.01 Aligned_cols=38 Identities=24% Similarity=0.465 Sum_probs=28.8
Q ss_pred HHHHHHHHHHHHHcc--eEEEEe------CCCChhHHHHHHHHHHH
Q 041758 82 EEIVDQVRAAAETWG--FFQVVN------HGIPLNVLEEIIEGIRK 119 (183)
Q Consensus 82 ~~~~~~l~~A~~~~G--FF~v~n------HGI~~~li~~~~~~~~~ 119 (183)
.+....|.+.+++|| .+.++. |||+.+-+..+++..++
T Consensus 23 ~~~l~~la~ia~~yg~~~irlT~~Q~l~l~~v~~~~~~~i~~~L~~ 68 (69)
T PF03460_consen 23 AEQLRALAEIAEKYGDGEIRLTTRQNLQLRGVPEENLPAIFEELKE 68 (69)
T ss_dssp HHHHHHHHHHHHHHSTSEEEEETTSCEEEEEEEGGGHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhCCCeEEECCCCeEEEeCCCHHHHHHHHHHHHc
Confidence 356788899999887 666544 78999888888876654
No 38
>PRK08087 L-fuculose phosphate aldolase; Provisional
Probab=45.45 E-value=25 Score=28.35 Aligned_cols=36 Identities=17% Similarity=0.262 Sum_probs=27.2
Q ss_pred CcceeeCCCCCCCcHHHHHHHHHHHHHHcceEEEEeCCC
Q 041758 67 QVPVIDLDGVRGNKLEEIVDQVRAAAETWGFFQVVNHGI 105 (183)
Q Consensus 67 ~IPvIDls~l~~~~~~~~~~~l~~A~~~~GFF~v~nHGI 105 (183)
.||++.+.... ..+.++.+..++.+...+.+-|||+
T Consensus 122 ~v~~~~y~~~g---s~~la~~~~~~l~~~~~vLl~nHGv 157 (215)
T PRK08087 122 SIPCAPYATFG---TRELSEHVALALKNRKATLLQHHGL 157 (215)
T ss_pred CceeecCCCCC---CHHHHHHHHHHhCcCCEEEecCCCC
Confidence 48888765442 3466778888888888999999996
No 39
>PF00596 Aldolase_II: Class II Aldolase and Adducin N-terminal domain; InterPro: IPR001303 This entry represents the alpha/beta/alpha domain found in class II aldolases and adducin, usually at the N terminus. These proteins form part of a family that includes: rhamnulose-1-phosphate aldolase (4.1.2.19 from EC), L-fuculose phosphate aldolase (4.1.2.17 from EC) [, ] that is involved in the third step in fucose metabolism, L-ribulose- 5-phosphate 4-epimerase (5.1.3.4 from EC) involved in the third step of L-arabinose catabolism, a probable sugar isomerase SgbE, hypothetical proteins and the metazoan adducins which have not been ascribed any enzymatic function but which play a role in cell membrane cytoskeleton organisation. Adducins are members of the Ig superfamily and encode cell surface sialoglycoproteins expressed by cytokine-activated endothelium. This type I membrane protein mediates leukocyte-endothelial cell adhesion and signal transduction, and may play a role in the development of artherosclerosis and rheumatoid arthritis. Adducin is a cell-membrane skeletal protein that was first purified from human erythrocytes and subsequently isolated from bovine brain membranes. Isoforms of this protein have been detected in lung, kidney, testes and liver. Erythrocyte adducin is a 200kDa heterodimer protein, composed of alpha and beta subunits, present at about 30,000 copies per cell. It binds with high affinity to Ca(2+)/calmodulin and is a substrate for protein kinases A and C. Both alpha-adducin and beta-adducin show alternative splicing. Thus, there may be several different heterodimeric or homodimeric forms of adducin, each with a different functional specificity. It is thought to play a role in assembly of the spectrin-actin lattice that underlies the plasma membrane []. Missense mutations in both the alpha- and beta-adducin genes that alter amino acids that are normally phosphorylated have been associated with the regulation of blood pressure in the Milan hypertensive strain (MHS) of rats. Gamma adducin was isolated from human foetal brain []. It shows a high degree of similarity to the alpha and beta adducins.; GO: 0046872 metal ion binding; PDB: 2V9N_B 1GT7_B 2V9O_E 2V9M_B 2V9F_A 2UYV_A 1OJR_A 2V9G_C 2V29_B 2V9I_A ....
Probab=45.39 E-value=9.5 Score=29.64 Aligned_cols=37 Identities=24% Similarity=0.365 Sum_probs=28.4
Q ss_pred CCcceeeCCCCCCCcHHHHHHHHHHHHH-HcceEEEEeCCC
Q 041758 66 SQVPVIDLDGVRGNKLEEIVDQVRAAAE-TWGFFQVVNHGI 105 (183)
Q Consensus 66 ~~IPvIDls~l~~~~~~~~~~~l~~A~~-~~GFF~v~nHGI 105 (183)
..+|+|+..... ..+..+.|.++++ ....+.+.|||+
T Consensus 122 ~~v~~~~~~~~~---~~~l~~~i~~~l~~~~~~vll~nHG~ 159 (184)
T PF00596_consen 122 GEVPVVPYAPPG---SEELAEAIAEALGEDRKAVLLRNHGV 159 (184)
T ss_dssp SCEEEE-THSTT---CHHHHHHHHHHHTCTSSEEEETTTEE
T ss_pred ccceeecccccc---chhhhhhhhhhhcCCceEEeecCCce
Confidence 579999886642 2456788899998 889999999995
No 40
>TIGR01086 fucA L-fuculose phosphate aldolase. Members of this family are L-fuculose phosphate aldolase from various Proteobacteria, encoded in fucose utilization operons. Homologs in other bacteria given similar annotation may share extensive sequence similarity but are not experimenally characterized and are not found in apparent fucose utilization operons; we consider their annotation as L-fuculose phosphate aldolase to be tenuous. This model has been narrowed in scope from the previous version.
Probab=43.11 E-value=30 Score=27.81 Aligned_cols=36 Identities=14% Similarity=0.272 Sum_probs=26.1
Q ss_pred CcceeeCCCCCCCcHHHHHHHHHHHHHHcceEEEEeCCC
Q 041758 67 QVPVIDLDGVRGNKLEEIVDQVRAAAETWGFFQVVNHGI 105 (183)
Q Consensus 67 ~IPvIDls~l~~~~~~~~~~~l~~A~~~~GFF~v~nHGI 105 (183)
.||++.+... .-.+.++.+..+..+..-+.|-|||+
T Consensus 121 ~i~~v~y~~~---gs~~la~~v~~~~~~~~~vLL~nHG~ 156 (214)
T TIGR01086 121 NIPCVPYATF---GSTKLASEVVAGILKSKAILLLHHGL 156 (214)
T ss_pred CccccCCCCC---ChHHHHHHHHHHhhhCCEEehhcCCC
Confidence 4666665543 23456777888888889999999995
No 41
>PRK06755 hypothetical protein; Validated
Probab=43.05 E-value=24 Score=28.57 Aligned_cols=36 Identities=19% Similarity=0.276 Sum_probs=26.5
Q ss_pred CcceeeCCCCCCCcHHHHHHHHHHHHHHcceEEEEeCCC
Q 041758 67 QVPVIDLDGVRGNKLEEIVDQVRAAAETWGFFQVVNHGI 105 (183)
Q Consensus 67 ~IPvIDls~l~~~~~~~~~~~l~~A~~~~GFF~v~nHGI 105 (183)
.||||..... .....++.+..+.++...+.|-|||+
T Consensus 136 ~IPiv~~~~~---~~~~la~~~~~~~~~~~avLl~~HGv 171 (209)
T PRK06755 136 TIPIVEDEKK---FADLLENNVPNFIEGGGVVLVHNYGM 171 (209)
T ss_pred EEEEEeCCCc---hhHHHHHHHHhhccCCCEEEEcCCCe
Confidence 5999987542 23456666667777888999999996
No 42
>PRK03634 rhamnulose-1-phosphate aldolase; Provisional
Probab=42.41 E-value=26 Score=29.61 Aligned_cols=36 Identities=14% Similarity=0.139 Sum_probs=27.3
Q ss_pred CcceeeCCCCCCCcHHHHHHHHHHHHHHcceEEEEeCCC
Q 041758 67 QVPVIDLDGVRGNKLEEIVDQVRAAAETWGFFQVVNHGI 105 (183)
Q Consensus 67 ~IPvIDls~l~~~~~~~~~~~l~~A~~~~GFF~v~nHGI 105 (183)
.||++.+... .-.+.++.+.+++++...+.+-|||+
T Consensus 179 ~i~vvpy~~p---gs~eLa~~v~~~l~~~~avLL~nHGv 214 (274)
T PRK03634 179 GVGIVPWMVP---GTDEIGQATAEKMQKHDLVLWPKHGV 214 (274)
T ss_pred ceeEecCCCC---CCHHHHHHHHHHhccCCEEEEcCCCC
Confidence 4777766543 23467788888888888999999996
No 43
>PRK06357 hypothetical protein; Provisional
Probab=42.23 E-value=38 Score=27.44 Aligned_cols=36 Identities=22% Similarity=0.391 Sum_probs=25.4
Q ss_pred CcceeeCCCCCCCcHHHHHHHHHHHHHHc------ceEEEEeCCC
Q 041758 67 QVPVIDLDGVRGNKLEEIVDQVRAAAETW------GFFQVVNHGI 105 (183)
Q Consensus 67 ~IPvIDls~l~~~~~~~~~~~l~~A~~~~------GFF~v~nHGI 105 (183)
.||++.+... ...+.++.+.+++++. ..+.+.|||+
T Consensus 130 ~i~~~p~~~~---gs~ela~~v~~~l~~~~~~~~~~~vLl~nHGv 171 (216)
T PRK06357 130 KIPTLPFAPA---TSPELAEIVRKHLIELGDKAVPSAFLLNSHGI 171 (216)
T ss_pred CcceecccCC---CcHHHHHHHHHHHhhcCcccCCCEEEECCCCC
Confidence 3677666543 2356777888887764 4899999995
No 44
>PF01471 PG_binding_1: Putative peptidoglycan binding domain; InterPro: IPR002477 This entry represents peptidoglycan binding domain (PGBD), as well as related domains that share the same structure. PGBD may have a general peptidoglycan binding function, has a core structure consisting of a closed, three-helical bundle with a left-handed twist. It is found at the N or C terminus of a variety of enzymes involved in bacterial cell wall degradation [, , ]. Examples are: Muramoyl-pentapeptide carboxypeptidase (3.4.17.8 from EC) N-acetylmuramoyl-L-alanine amidase cwlA precursor (cell wall hydrolase, autolysin, 3.5.1.28 from EC) Autolytic lysozyme (1,4-beta-N-acetylmuramidase, autolysin, 3.2.1.17 from EC) Membrane-bound lytic murein transglycosylase B Zinc-containing D-alanyl-D-alanine-cleaving carboxypeptidase, VanX []. Many of the proteins having this domain are as yet uncharacterised. However, some are known to belong to MEROPS peptidase family M15 (clan MD), subfamily M15A metallopeptidases. A number of the proteins belonging to subfamily M15A are non-peptidase homologues as they either have been found experimentally to be without peptidase activity, or lack amino acid residues that are believed to be essential for the catalytic activity. Eukaryotic enzymes can contain structurally similar PGBD-like domains. Matrix metalloproteinases (MMP), which catalyse extracellular matrix degradation, have N-terminal domains that resemble PGBD. Examples are gelatinase A (MMP-2), which degrades type IV collagen [], stromelysin-1 (MMP-3), which plays a role in arthritis and tumour invasion [, ], and gelatinase B (MMP-9) secreted by neutrophils as part of the innate immune defence mechanism []. Several MMPs are implicated in cancer progression, since degradation of the extracellular matrix is an essential step in the cascade of metastasis [].; GO: 0008152 metabolic process; PDB: 1L6J_A 3BKH_A 3BKV_A 1GXD_A 1EAK_D 1CK7_A 1SLM_A 1LBU_A 1SU3_B.
Probab=42.04 E-value=46 Score=20.43 Aligned_cols=42 Identities=17% Similarity=0.158 Sum_probs=29.4
Q ss_pred HHHHHHHHHHHHcceEEEEeCCCChhHHHHHHHHHHHHhcCC
Q 041758 83 EIVDQVRAAAETWGFFQVVNHGIPLNVLEEIIEGIRKFNEQD 124 (183)
Q Consensus 83 ~~~~~l~~A~~~~GFF~v~nHGI~~~li~~~~~~~~~FF~lp 124 (183)
..+..|...+...||....-.|+-...+.++....+.++.|+
T Consensus 3 ~~v~~lq~~L~~~gy~~~~~~g~~~~~t~~Av~~fQ~~~gL~ 44 (57)
T PF01471_consen 3 PDVKALQQYLNRLGYYPGPVDGIFDPETREAVKAFQKANGLP 44 (57)
T ss_dssp HHHHHHHHHHHHTTTT-SSTTSBSHHHHHHHHHHHHHHTTS-
T ss_pred HHHHHHHHHHHHcCCCCCCCCCCcCHHHHHHHHHHHHHcCcC
Confidence 456888999999999955556666666666666666777665
No 45
>cd05796 Ribosomal_P0_like Ribosomal protein L10 family, P0-like protein subfamily; composed of uncharacterized eukaryotic proteins with similarity to the 60S ribosomal protein P0, including the Saccharomyces cerevisiae protein called mRNA turnover protein 4 (MRT4). MRT4 may be involved in mRNA decay. P0 forms a tight complex with multiple copies of the small acidic protein L12(e). This complex forms a stalk structure on the large subunit of the ribosome. It occupies the L7/L12 stalk of the ribosome. The stalk is known to contain the binding site for elongation factors EF-G and EF-Tu; however, there is disagreement as to whether or not P0 is involved in forming the binding site. The stalk is believed to be associated with GTPase activities in protein synthesis. In a neuroblastoma cell line, P0 has been shown to interact with the SH3 domain of Src and to activate the binding of the Nck1 adaptor protein with skeletal proteins such as the Wiskott-Aldrich Syndrome Protein (WASP) and the WAS
Probab=41.56 E-value=78 Score=24.44 Aligned_cols=39 Identities=18% Similarity=0.417 Sum_probs=30.6
Q ss_pred HHHHHHHHHHHHHHcceEEEEe-CCCChhHHHHHHHHHHH
Q 041758 81 LEEIVDQVRAAAETWGFFQVVN-HGIPLNVLEEIIEGIRK 119 (183)
Q Consensus 81 ~~~~~~~l~~A~~~~GFF~v~n-HGI~~~li~~~~~~~~~ 119 (183)
..+.+++|.+.+.++-.++|++ +|++...++++++..+.
T Consensus 3 K~~~v~~l~e~l~~y~~v~iv~~~gl~~~ql~~iR~~lr~ 42 (163)
T cd05796 3 KQKLVENIREAVDKYKYIYVFSVDNMRNNKLKDIRQEWKD 42 (163)
T ss_pred HHHHHHHHHHHHHhCCEEEEEEecCCCHHHHHHHHHHhcC
Confidence 3567888888898887666665 78998888888888764
No 46
>TIGR02409 carnitine_bodg gamma-butyrobetaine hydroxylase. Members of this protein family are gamma-butyrobetaine hydroxylase, both bacterial and eukarytotic. This enzyme catalyzes the last step in the conversion of lysine to carnitine. Carnitine can serve as a compatible solvent in bacteria and also participates in fatty acid metabolism.
Probab=41.49 E-value=38 Score=29.55 Aligned_cols=52 Identities=10% Similarity=0.058 Sum_probs=37.5
Q ss_pred CCCcceeeCCCCCCCcHHHHHHHHHHHHHHcceEEEEeCCCChhHHHHHHHHHHHHh
Q 041758 65 NSQVPVIDLDGVRGNKLEEIVDQVRAAAETWGFFQVVNHGIPLNVLEEIIEGIRKFN 121 (183)
Q Consensus 65 ~~~IPvIDls~l~~~~~~~~~~~l~~A~~~~GFF~v~nHGI~~~li~~~~~~~~~FF 121 (183)
...+|.||++.+.. ....+.++..++.++|+..+.+-.++.+.+ .+.++.|-
T Consensus 107 ~~~~~~~d~~~~~~--~~~~~~~~~~~l~~~G~v~~rg~~~~~~~~---~~~~~~~G 158 (366)
T TIGR02409 107 ELSLPKFDHEAVMK--DDSVLLDWLSAVRDVGIAVLKGAPTKPGAV---EKLGKRIG 158 (366)
T ss_pred cccCCceeHHHHhC--CHHHHHHHHHHHHhccEEEEeCCCCCHHHH---HHHHHHhc
Confidence 35688999977643 245678899999999999999988876543 44444443
No 47
>PRK06557 L-ribulose-5-phosphate 4-epimerase; Validated
Probab=39.84 E-value=27 Score=28.21 Aligned_cols=36 Identities=19% Similarity=0.170 Sum_probs=26.2
Q ss_pred CcceeeCCCCCCCcHHHHHHHHHHHH--HHcceEEEEeCCC
Q 041758 67 QVPVIDLDGVRGNKLEEIVDQVRAAA--ETWGFFQVVNHGI 105 (183)
Q Consensus 67 ~IPvIDls~l~~~~~~~~~~~l~~A~--~~~GFF~v~nHGI 105 (183)
.||++..... ...+.++.+.++. .+...+.+-|||+
T Consensus 130 ~ip~~~y~~~---g~~ela~~i~~~l~~~~~~~vll~nHG~ 167 (221)
T PRK06557 130 PIPVGPFALI---GDEAIGKGIVETLKGGRSPAVLMQNHGV 167 (221)
T ss_pred CeeccCCcCC---CcHHHHHHHHHHhCcCCCCEEEECCCCc
Confidence 5777766543 2346677888887 6778899999996
No 48
>TIGR03328 salvage_mtnB methylthioribulose-1-phosphate dehydratase. Members of this family are the methylthioribulose-1-phosphate dehydratase of the methionine salvage pathway. This pathway allows methylthioadenosine, left over from polyamine biosynthesis, to be recycled to methionine.
Probab=39.33 E-value=41 Score=26.58 Aligned_cols=35 Identities=17% Similarity=0.313 Sum_probs=26.3
Q ss_pred CcceeeCCCCCCCcHHHHHHHHHHHHH---HcceEEEEeCCC
Q 041758 67 QVPVIDLDGVRGNKLEEIVDQVRAAAE---TWGFFQVVNHGI 105 (183)
Q Consensus 67 ~IPvIDls~l~~~~~~~~~~~l~~A~~---~~GFF~v~nHGI 105 (183)
.||++.. .. .-.+.++.+..+++ +...+.|-|||+
T Consensus 126 ~vp~~~~-~~---gs~ela~~~~~~l~~~~~~~avll~nHGv 163 (193)
T TIGR03328 126 TIPIFEN-TQ---DIARLADSVAPYLEAYPDVPGVLIRGHGL 163 (193)
T ss_pred EEeeecC-CC---ChHHHHHHHHHHHhcCCCCCEEEEcCCcc
Confidence 5888864 22 23567888888886 468999999996
No 49
>cd05795 Ribosomal_P0_L10e Ribosomal protein L10 family, P0 and L10e subfamily; composed of eukaryotic 60S ribosomal protein P0 and the archaeal P0 homolog, L10e. P0 or L10e forms a tight complex with multiple copies of the small acidic protein L12(e). This complex forms a stalk structure on the large subunit of the ribosome. The stalk is known to contain the binding site for elongation factors G and Tu (EF-G and EF-Tu, respectively); however, there is disagreement as to whether or not L10 is involved in forming the binding site. The stalk is believed to be associated with GTPase activities in protein synthesis. In a neuroblastoma cell line, L10 has been shown to interact with the SH3 domain of Src and to activate the binding of the Nck1 adaptor protein with skeletal proteins such as the Wiskott-Aldrich Syndrome Protein (WASP) and the WASP-interacting protein (WIP). These eukaryotic and archaeal P0 sequences have an additional C-terminal domain homologous with acidic proteins P1 and P2.
Probab=39.07 E-value=89 Score=24.42 Aligned_cols=39 Identities=15% Similarity=0.284 Sum_probs=30.0
Q ss_pred HHHHHHHHHHHHHHcceEEEEe-CCCChhHHHHHHHHHHH
Q 041758 81 LEEIVDQVRAAAETWGFFQVVN-HGIPLNVLEEIIEGIRK 119 (183)
Q Consensus 81 ~~~~~~~l~~A~~~~GFF~v~n-HGI~~~li~~~~~~~~~ 119 (183)
..+.+++|.+.+.++.+++|++ .|++...++++++..++
T Consensus 3 K~~~v~el~e~l~~~~~v~v~~~~gl~~~ql~~lR~~lr~ 42 (175)
T cd05795 3 KKEYVEKLTELLKSYPKVLIVDADNVGSKQLQKIRRSLRG 42 (175)
T ss_pred HHHHHHHHHHHHHhCCEEEEEEecCCChHHHHHHHHHhhC
Confidence 3567788888888888777765 67888888888887764
No 50
>TIGR02624 rhamnu_1P_ald rhamnulose-1-phosphate aldolase. Members of this family are the enzyme RhaD, rhamnulose-1-phosphate aldolase.
Probab=37.52 E-value=32 Score=29.01 Aligned_cols=36 Identities=19% Similarity=0.143 Sum_probs=27.7
Q ss_pred CcceeeCCCCCCCcHHHHHHHHHHHHHHcceEEEEeCCC
Q 041758 67 QVPVIDLDGVRGNKLEEIVDQVRAAAETWGFFQVVNHGI 105 (183)
Q Consensus 67 ~IPvIDls~l~~~~~~~~~~~l~~A~~~~GFF~v~nHGI 105 (183)
.||++.+... ...+.++.+..++++..-+.+.|||+
T Consensus 177 ~i~vvp~~~p---Gs~eLA~~v~~~l~~~~avLL~nHGv 212 (270)
T TIGR02624 177 GVGIIPWMVP---GTNEIGEATAEKMKEHRLVLWPHHGI 212 (270)
T ss_pred ccccccCcCC---CCHHHHHHHHHHhccCCEEEEcCCCC
Confidence 4777766543 23578888889998889999999996
No 51
>PF11243 DUF3045: Protein of unknown function (DUF3045); InterPro: IPR021405 This entry is represented by Bacteriophage T4, Gp30.1; it is a family of uncharacterised viral proteins.
Probab=37.18 E-value=31 Score=23.92 Aligned_cols=21 Identities=14% Similarity=0.153 Sum_probs=17.3
Q ss_pred HHHHHHHHHcceEEEEeCCCC
Q 041758 86 DQVRAAAETWGFFQVVNHGIP 106 (183)
Q Consensus 86 ~~l~~A~~~~GFF~v~nHGI~ 106 (183)
+.|-.-|-+.||.||..|-+.
T Consensus 36 ~~if~eCVeqGFiYVs~~~~~ 56 (89)
T PF11243_consen 36 EPIFKECVEQGFIYVSKYWMD 56 (89)
T ss_pred cHHHHHHHhcceEEEEeeeec
Confidence 456777999999999888764
No 52
>PRK04019 rplP0 acidic ribosomal protein P0; Validated
Probab=37.03 E-value=91 Score=27.02 Aligned_cols=39 Identities=26% Similarity=0.481 Sum_probs=32.9
Q ss_pred HHHHHHHHHHHHHHcceEEEEe-CCCChhHHHHHHHHHHH
Q 041758 81 LEEIVDQVRAAAETWGFFQVVN-HGIPLNVLEEIIEGIRK 119 (183)
Q Consensus 81 ~~~~~~~l~~A~~~~GFF~v~n-HGI~~~li~~~~~~~~~ 119 (183)
..+.+++|...+.++.+++|++ +|++...++++++..+.
T Consensus 8 K~~~v~el~~~l~~~~~v~iv~~~gl~~~ql~~lR~~lr~ 47 (330)
T PRK04019 8 KKEEVEELKELIKSYPVVGIVDLEGIPARQLQEIRRKLRG 47 (330)
T ss_pred HHHHHHHHHHHHHhCCEEEEEEcCCCCHHHHHHHHHHHHc
Confidence 4678889999999998888887 68999999999888875
No 53
>PRK06754 mtnB methylthioribulose-1-phosphate dehydratase; Reviewed
Probab=34.68 E-value=41 Score=26.97 Aligned_cols=34 Identities=21% Similarity=0.484 Sum_probs=25.9
Q ss_pred Ccceee-CCCCCCCcHHHHHHHHHHHHH-HcceEEEEeCCC
Q 041758 67 QVPVID-LDGVRGNKLEEIVDQVRAAAE-TWGFFQVVNHGI 105 (183)
Q Consensus 67 ~IPvID-ls~l~~~~~~~~~~~l~~A~~-~~GFF~v~nHGI 105 (183)
.||++. ... ..+.++.+.++.+ +...+.+-|||+
T Consensus 137 ~vpv~~~~~~-----~~eLa~~v~~~l~~~~~avLl~nHG~ 172 (208)
T PRK06754 137 HIPIIENHAD-----IPTLAEEFAKHIQGDSGAVLIRNHGI 172 (208)
T ss_pred EEEEecCCCC-----HHHHHHHHHHHhccCCcEEEECCCce
Confidence 478875 322 3578888888887 788999999995
No 54
>COG0244 RplJ Ribosomal protein L10 [Translation, ribosomal structure and biogenesis]
Probab=32.87 E-value=1.6e+02 Score=23.17 Aligned_cols=39 Identities=18% Similarity=0.346 Sum_probs=32.1
Q ss_pred HHHHHHHHHHHHHHcceEEEEe-CCCChhHHHHHHHHHHH
Q 041758 81 LEEIVDQVRAAAETWGFFQVVN-HGIPLNVLEEIIEGIRK 119 (183)
Q Consensus 81 ~~~~~~~l~~A~~~~GFF~v~n-HGI~~~li~~~~~~~~~ 119 (183)
....++.|.+.+++...|.+++ +|++...+.+++...|+
T Consensus 8 K~~~v~el~e~~~~s~~~~i~dy~Gl~~~ql~~lR~~lr~ 47 (175)
T COG0244 8 KKELVAELKELIKESPSVVIVDYRGLTVAQLTELRKKLRE 47 (175)
T ss_pred HHHHHHHHHHHHhhCCEEEEEEeCCCcHHHHHHHHHHHHh
Confidence 4667888899988887777766 78999999999988886
No 55
>cd05797 Ribosomal_L10 Ribosomal protein L10 family, L10 subfamily; composed of bacterial 50S ribosomal protein and eukaryotic mitochondrial 39S ribosomal protein, L10. L10 occupies the L7/L12 stalk of the ribosome. The N-terminal domain (NTD) of L10 interacts with L11 protein and forms the base of the L7/L12 stalk, while the extended C-terminal helix binds to two or three dimers of the NTD of L7/L12 (L7 and L12 are identical except for an acetylated N-terminus). The L7/L12 stalk is known to contain the binding site for elongation factors G and Tu (EF-G and EF-Tu, respectively); however, there is disagreement as to whether or not L10 is involved in forming the binding site. The stalk is believed to be associated with GTPase activities in protein synthesis. In a neuroblastoma cell line, L10 has been shown to interact with the SH3 domain of Src and to activate the binding of the Nck1 adaptor protein with skeletal proteins such as the Wiskott-Aldrich Syndrome Protein (WASP) and the WASP-in
Probab=31.57 E-value=1.8e+02 Score=21.86 Aligned_cols=39 Identities=23% Similarity=0.359 Sum_probs=28.1
Q ss_pred HHHHHHHHHHHHHHcceEEEEe-CCCChhHHHHHHHHHHH
Q 041758 81 LEEIVDQVRAAAETWGFFQVVN-HGIPLNVLEEIIEGIRK 119 (183)
Q Consensus 81 ~~~~~~~l~~A~~~~GFF~v~n-HGI~~~li~~~~~~~~~ 119 (183)
....+++|.+.+++..++.+++ +|++.+.+.+++...++
T Consensus 5 K~~~v~~l~~~l~~~~~v~v~~~~gl~~~~~~~lR~~lr~ 44 (157)
T cd05797 5 KEEIVAELKEKLKEAKSVVVADYRGLTVAQLTELRKELRE 44 (157)
T ss_pred HHHHHHHHHHHHHhCCEEEEEecCCCcHHHHHHHHHHHHH
Confidence 3556778888888877776666 46888777777777664
No 56
>COG3113 Predicted NTP binding protein (contains STAS domain) [General function prediction only]
Probab=31.36 E-value=1.4e+02 Score=21.48 Aligned_cols=42 Identities=24% Similarity=0.275 Sum_probs=30.6
Q ss_pred CcceeeCCCCCC-C-cHHHHHHHHHHHHHHcceEEEEeCCCChhH
Q 041758 67 QVPVIDLDGVRG-N-KLEEIVDQVRAAAETWGFFQVVNHGIPLNV 109 (183)
Q Consensus 67 ~IPvIDls~l~~-~-~~~~~~~~l~~A~~~~GFF~v~nHGI~~~l 109 (183)
.+--||++++.. | .--+..-.+.+-|+..|- .|.=+|+|+.+
T Consensus 40 ~~~~idLs~v~rvDSaglALL~~~~~~~k~~g~-~~~L~~~p~~L 83 (99)
T COG3113 40 DTVRIDLSGVSRVDSAGLALLLHLIRLAKKQGN-AVTLTGVPEQL 83 (99)
T ss_pred CeEEEehhhcceechHHHHHHHHHHHHHHHcCC-eeEEecCcHHH
Confidence 466788888742 2 233455677788898888 88889999876
No 57
>PRK05834 hypothetical protein; Provisional
Probab=30.66 E-value=62 Score=25.78 Aligned_cols=38 Identities=11% Similarity=0.171 Sum_probs=24.0
Q ss_pred CcceeeCCCCCCCcHHHHHHHHHHHHHHcc--eEEEEeCCC
Q 041758 67 QVPVIDLDGVRGNKLEEIVDQVRAAAETWG--FFQVVNHGI 105 (183)
Q Consensus 67 ~IPvIDls~l~~~~~~~~~~~l~~A~~~~G--FF~v~nHGI 105 (183)
.||++......+ ......+.+.+++.+.. .+.|.|||+
T Consensus 121 ~ipv~~~~~~~~-~~~~la~~v~~~l~~~~~~avLL~nHGv 160 (194)
T PRK05834 121 EISIYDPKDFDD-WYERADTEILRYLQEKNKNFVVIKGYGV 160 (194)
T ss_pred eeeecCccccch-HHHhHHHHHHHHHhhcCCCEEEEcCCcc
Confidence 477765443311 11234567788887755 899999995
No 58
>PRK09220 methylthioribulose-1-phosphate dehydratase; Provisional
Probab=29.30 E-value=76 Score=25.32 Aligned_cols=35 Identities=20% Similarity=0.384 Sum_probs=25.1
Q ss_pred CcceeeCCCCCCCcHHHHHHHHHHHHHHcc---eEEEEeCCC
Q 041758 67 QVPVIDLDGVRGNKLEEIVDQVRAAAETWG---FFQVVNHGI 105 (183)
Q Consensus 67 ~IPvIDls~l~~~~~~~~~~~l~~A~~~~G---FF~v~nHGI 105 (183)
.||++.-. . ...+.++.+..++++.. .+.|.|||+
T Consensus 134 ~vp~~~~~-~---~~~eLa~~v~~~l~~~~~~~avlL~nHGv 171 (204)
T PRK09220 134 VVPIFDND-Q---DIARLAARVAPYLDAQPLRYGYLIRGHGL 171 (204)
T ss_pred EEeeecCC-C---CHHHHHHHHHHHHHhCCCCcEEEECCCce
Confidence 46665421 1 24678888999998874 899999995
No 59
>PRK07490 hypothetical protein; Provisional
Probab=28.15 E-value=56 Score=26.94 Aligned_cols=24 Identities=21% Similarity=0.202 Sum_probs=20.7
Q ss_pred HHHHHHHHHHHHHcceEEEEeCCC
Q 041758 82 EEIVDQVRAAAETWGFFQVVNHGI 105 (183)
Q Consensus 82 ~~~~~~l~~A~~~~GFF~v~nHGI 105 (183)
.+.++.|.+++.+.--+.+.|||+
T Consensus 146 ~ela~~v~~~l~~~~avlL~nHG~ 169 (245)
T PRK07490 146 EEEGERLAGLLGDKRRLLMGNHGV 169 (245)
T ss_pred HHHHHHHHHHhCcCCEEEECCCCc
Confidence 467788888888888999999995
No 60
>PRK06661 hypothetical protein; Provisional
Probab=27.71 E-value=54 Score=26.85 Aligned_cols=37 Identities=8% Similarity=0.103 Sum_probs=25.8
Q ss_pred cceeeCCCCCCCcHHHHHHHHHHHHHHcceEEEEeCCC
Q 041758 68 VPVIDLDGVRGNKLEEIVDQVRAAAETWGFFQVVNHGI 105 (183)
Q Consensus 68 IPvIDls~l~~~~~~~~~~~l~~A~~~~GFF~v~nHGI 105 (183)
||..++..... +..+.++.+.+++.+...+.+-|||+
T Consensus 124 i~~~~~~~~~~-~~~~~~~~~a~~l~~~~avll~nHG~ 160 (231)
T PRK06661 124 ISYHNYNSLAL-DADKQSSRLVNDLKQNYVMLLRNHGA 160 (231)
T ss_pred ceecCCCcccc-CchhHHHHHHHHhCCCCEEEECCCCC
Confidence 56555443311 12456778888999999999999995
No 61
>PRK00099 rplJ 50S ribosomal protein L10; Reviewed
Probab=27.11 E-value=2.4e+02 Score=21.70 Aligned_cols=39 Identities=18% Similarity=0.279 Sum_probs=25.5
Q ss_pred HHHHHHHHHHHHHHcceEEEEe-CCCChhHHHHHHHHHHH
Q 041758 81 LEEIVDQVRAAAETWGFFQVVN-HGIPLNVLEEIIEGIRK 119 (183)
Q Consensus 81 ~~~~~~~l~~A~~~~GFF~v~n-HGI~~~li~~~~~~~~~ 119 (183)
....+++|.+.++++-++.+++ .|++...+.+++...+.
T Consensus 6 K~~~v~~l~~~l~~~~~v~v~~~~gl~~~~~~~lR~~lr~ 45 (172)
T PRK00099 6 KKEIVAELAEKLKKAQSAVVADYRGLTVAQMTELRKKLRE 45 (172)
T ss_pred HHHHHHHHHHHHHhCCEEEEEecCCCcHHHHHHHHHHHHH
Confidence 3456677777777776666555 36777777777766654
No 62
>PF02633 Creatininase: Creatinine amidohydrolase; InterPro: IPR003785 This family includes the enzymes creatininase and 2-amino-5-formylamino-6-ribosylaminopyrimidin-4(3H)-one 5'-monophosphate deformylase, also known as formamide hydrolase. Creatinase or creatinine amidohydrolase (3.5.2.10 from EC) catalyses the hydrolysis of creatinine to creatine, which can then be metabolised to urea and sarcosine by creatinase (3.5.3.3 from EC). Creatininase is a member of the urease-related amidohydrolase superfamily []. Formamide hydrolase catalyzes the hydrolysis of the formamide of 2-amino-5-formylamino-6-ribosylamino-4(3H)-pyrimidinone 5'-monophosphate (FAPy) to form 2,5-diamino-6-ribosylamino-4(3H)-pyrimidinone 5'-phosphate (APy) (3.5.1.102 from EC). ; PDB: 3A6K_F 3A6F_A 3A6D_B 1J2U_B 3A6J_C 1J2T_A 3A6G_C 3A6H_F 1Q3K_E 3A6L_C ....
Probab=26.15 E-value=1.8e+02 Score=23.60 Aligned_cols=37 Identities=19% Similarity=0.309 Sum_probs=23.4
Q ss_pred HHHHHHHHHHHHHHcceE--EE-EeCCCChhHHHHHHHHH
Q 041758 81 LEEIVDQVRAAAETWGFF--QV-VNHGIPLNVLEEIIEGI 117 (183)
Q Consensus 81 ~~~~~~~l~~A~~~~GFF--~v-~nHGI~~~li~~~~~~~ 117 (183)
-.+++..+...+.++||= .+ -.||=....++.+.+..
T Consensus 84 ~~~~l~di~~sl~~~Gf~~ivivngHgGN~~~l~~~~~~l 123 (237)
T PF02633_consen 84 LIALLRDILRSLARHGFRRIVIVNGHGGNIAALEAAAREL 123 (237)
T ss_dssp HHHHHHHHHHHHHHHT--EEEEEESSTTHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHcCCCEEEEEECCHhHHHHHHHHHHHH
Confidence 456788888899999983 33 44886555555544433
No 63
>COG0289 DapB Dihydrodipicolinate reductase [Amino acid transport and metabolism]
Probab=26.07 E-value=2.1e+02 Score=24.26 Aligned_cols=40 Identities=25% Similarity=0.296 Sum_probs=26.6
Q ss_pred HHHHHHHHHHHHcceEEEEeCCCChhHHHHHHHHHHHHhc
Q 041758 83 EIVDQVRAAAETWGFFQVVNHGIPLNVLEEIIEGIRKFNE 122 (183)
Q Consensus 83 ~~~~~l~~A~~~~GFF~v~nHGI~~~li~~~~~~~~~FF~ 122 (183)
+..++|.++.++.|.+.--|-.|-..++..+.+.+..+|.
T Consensus 106 e~~~~l~~~a~~v~vv~a~NfSiGvnll~~l~~~aak~l~ 145 (266)
T COG0289 106 EQLEKLREAAEKVPVVIAPNFSLGVNLLFKLAEQAAKVLD 145 (266)
T ss_pred HHHHHHHHHHhhCCEEEeccchHHHHHHHHHHHHHHHhcC
Confidence 4456666677777777777776666666666666666665
No 64
>PF03668 ATP_bind_2: P-loop ATPase protein family; InterPro: IPR005337 This entry represents UPF0042 nucleotide-binding proteins. This is a family of putative P-loop ATPases [], as they contain an ATP-binding site and display ATPase and GTPase activities.; GO: 0005524 ATP binding
Probab=24.44 E-value=1e+02 Score=26.35 Aligned_cols=29 Identities=31% Similarity=0.510 Sum_probs=23.3
Q ss_pred HHHHHHHcceEEEEeCCCChhHHHHHHHHHH
Q 041758 88 VRAAAETWGFFQVVNHGIPLNVLEEIIEGIR 118 (183)
Q Consensus 88 l~~A~~~~GFF~v~nHGI~~~li~~~~~~~~ 118 (183)
..+++++.|||.|.| +|..|+..+.+...
T Consensus 17 Al~~lED~Gy~cvDN--lP~~Ll~~l~~~~~ 45 (284)
T PF03668_consen 17 ALRALEDLGYYCVDN--LPPSLLPQLIELLA 45 (284)
T ss_pred HHHHHHhcCeeEEcC--CcHHHHHHHHHHHH
Confidence 367899999999998 67888887777655
No 65
>PF11043 DUF2856: Protein of unknown function (DUF2856); InterPro: IPR020500 This phage protein modulates the activity of the host recBCD nuclease and thus protects the linear double stranded DNA from exonuclease degradation [].
Probab=24.41 E-value=1.1e+02 Score=21.36 Aligned_cols=23 Identities=30% Similarity=0.336 Sum_probs=17.5
Q ss_pred hHHHHHHHHHHHHhcCCHHHHHh
Q 041758 108 NVLEEIIEGIRKFNEQDVELKKE 130 (183)
Q Consensus 108 ~li~~~~~~~~~FF~lp~eeK~~ 130 (183)
++++.+......|.+||.|.|..
T Consensus 21 EVL~~~k~N~D~~~aL~~ETKaE 43 (97)
T PF11043_consen 21 EVLDNIKNNYDAFMALPPETKAE 43 (97)
T ss_pred HHHHHHHHHHHHHHcCChhhHHH
Confidence 56677777777888899888744
No 66
>cd00398 Aldolase_II Class II Aldolase and Adducin head (N-terminal) domain. Aldolases are ubiquitous enzymes catalyzing central steps of carbohydrate metabolism. Based on enzymatic mechanisms, this superfamily has been divided into two distinct classes (Class I and II). Class II enzymes are further divided into two sub-classes A and B. This family includes class II A aldolases and adducins which has not been ascribed any enzymatic function. Members of this class are primarily bacterial and eukaryotic in origin and include L-fuculose-1-phosphate, L-rhamnulose-1-phosphate aldolases and L-ribulose-5-phosphate 4-epimerases. They all share the ability to promote carbon-carbon bond cleavage and stabilize enolate intermediates using divalent cations.
Probab=23.99 E-value=57 Score=25.98 Aligned_cols=39 Identities=18% Similarity=0.131 Sum_probs=26.7
Q ss_pred CCcceeeCCCCCCCcHHHHHHHHHHHHHHcceEEEEeCCC
Q 041758 66 SQVPVIDLDGVRGNKLEEIVDQVRAAAETWGFFQVVNHGI 105 (183)
Q Consensus 66 ~~IPvIDls~l~~~~~~~~~~~l~~A~~~~GFF~v~nHGI 105 (183)
..||+++...... ...+.+..+..+..+.-.+.+-|||+
T Consensus 121 ~~ip~~~~~~~~~-~~~~la~~~~~~l~~~~~vll~nHG~ 159 (209)
T cd00398 121 GDIPCTPYMTPET-GEDEIGTQRALGFPNSKAVLLRNHGL 159 (209)
T ss_pred CCeeecCCcCCCc-cHHHHHHHHhcCCCcCCEEEEcCCCC
Confidence 3588888765411 13455566666667778999999996
No 67
>PF00466 Ribosomal_L10: Ribosomal protein L10; InterPro: IPR001790 Ribosomes are the particles that catalyse mRNA-directed protein synthesis in all organisms. The codons of the mRNA are exposed on the ribosome to allow tRNA binding. This leads to the incorporation of amino acids into the growing polypeptide chain in accordance with the genetic information. Incoming amino acid monomers enter the ribosomal A site in the form of aminoacyl-tRNAs complexed with elongation factor Tu (EF-Tu) and GTP. The growing polypeptide chain, situated in the P site as peptidyl-tRNA, is then transferred to aminoacyl-tRNA and the new peptidyl-tRNA, extended by one residue, is translocated to the P site with the aid the elongation factor G (EF-G) and GTP as the deacylated tRNA is released from the ribosome through one or more exit sites [, ]. About 2/3 of the mass of the ribosome consists of RNA and 1/3 of protein. The proteins are named in accordance with the subunit of the ribosome which they belong to - the small (S1 to S31) and the large (L1 to L44). Usually they decorate the rRNA cores of the subunits. Many ribosomal proteins, particularly those of the large subunit, are composed of a globular, surfaced-exposed domain with long finger-like projections that extend into the rRNA core to stabilise its structure. Most of the proteins interact with multiple RNA elements, often from different domains. In the large subunit, about 1/3 of the 23S rRNA nucleotides are at least in van der Waal's contact with protein, and L22 interacts with all six domains of the 23S rRNA. Proteins S4 and S7, which initiate assembly of the 16S rRNA, are located at junctions of five and four RNA helices, respectively. In this way proteins serve to organise and stabilise the rRNA tertiary structure. While the crucial activities of decoding and peptide transfer are RNA based, proteins play an active role in functions that may have evolved to streamline the process of protein synthesis. In addition to their function in the ribosome, many ribosomal proteins have some function 'outside' the ribosome [, ]. On the basis of sequence similarities the following prokaryotic and eukaryotic ribosomal proteins can be grouped: Bacterial 50S ribosomal protein L10; Archaebacterial acidic ribosomal protein P0 homologue (L10E); Eukaryotic 60S ribosomal protein P0 (L10E). This entry represents the ribosomal protein L10P family, with includes the above mentioned ribosomal proteins.; GO: 0042254 ribosome biogenesis, 0005622 intracellular; PDB: 3A1Y_G 3D5D_J 3PYT_I 3PYV_I 3D5B_J 3PYO_I 3PYR_I 3MS1_I 3MRZ_I 1VQ9_G ....
Probab=23.81 E-value=2.5e+02 Score=19.24 Aligned_cols=40 Identities=30% Similarity=0.453 Sum_probs=31.4
Q ss_pred HHHHHHHHHHHHHHcceEEEE-eCCCChhHHHHHHHHHHHH
Q 041758 81 LEEIVDQVRAAAETWGFFQVV-NHGIPLNVLEEIIEGIRKF 120 (183)
Q Consensus 81 ~~~~~~~l~~A~~~~GFF~v~-nHGI~~~li~~~~~~~~~F 120 (183)
....+++|...+.++-.+.++ .+|++...+.+++...+..
T Consensus 6 K~~~v~~~~~~l~~~~~v~v~~~~~l~~~~~~~lR~~l~~~ 46 (100)
T PF00466_consen 6 KEEIVEELKELLKKSKYVIVVDYNGLSANQLQELRKELRKK 46 (100)
T ss_dssp HHHHHHHHHHHHHCSSEEEEEECTTSCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhCCEEEEEEeCCCCHHHHHHHHHHHHhc
Confidence 456788999999988555554 4789999999988888775
No 68
>PF08823 PG_binding_2: Putative peptidoglycan binding domain; InterPro: IPR014927 This entry may be a peptidoglycan binding domain.
Probab=23.57 E-value=1.8e+02 Score=19.59 Aligned_cols=38 Identities=13% Similarity=0.284 Sum_probs=29.0
Q ss_pred HHHHHHHHHHHHHcceEEEEeCCCChhHHHHHHHHHHH
Q 041758 82 EEIVDQVRAAAETWGFFQVVNHGIPLNVLEEIIEGIRK 119 (183)
Q Consensus 82 ~~~~~~l~~A~~~~GFF~v~nHGI~~~li~~~~~~~~~ 119 (183)
..+++.|..+++.+||.+=--||.-.+-..+++.....
T Consensus 15 ~~~~~evq~~L~~lGyy~g~~~g~~d~a~~~Al~~~~g 52 (74)
T PF08823_consen 15 GDVAREVQEALKRLGYYKGEADGVWDEATEDALRAWAG 52 (74)
T ss_pred HHHHHHHHHHHHHcCCccCCCCCcccHHHHHHHHHHHH
Confidence 46889999999999999888888766555555554443
No 69
>PF12368 DUF3650: Protein of unknown function (DUF3650) ; InterPro: IPR022111 This domain family is found in bacteria, and is approximately 30 amino acids in length. The family is found in association with PF00581 from PFAM. There is a single completely conserved residue N that may be functionally important.
Probab=22.53 E-value=39 Score=18.69 Aligned_cols=17 Identities=24% Similarity=0.305 Sum_probs=11.9
Q ss_pred EEEEeCCCChhHHHHHH
Q 041758 98 FQVVNHGIPLNVLEEII 114 (183)
Q Consensus 98 F~v~nHGI~~~li~~~~ 114 (183)
.||..||++.+-+.+-+
T Consensus 9 rYV~eh~ls~ee~~~RL 25 (28)
T PF12368_consen 9 RYVKEHGLSEEEVAERL 25 (28)
T ss_pred hhHHhcCCCHHHHHHHH
Confidence 36788998887666543
No 70
>PRK04596 minC septum formation inhibitor; Reviewed
Probab=21.19 E-value=1.8e+02 Score=24.44 Aligned_cols=49 Identities=8% Similarity=-0.004 Sum_probs=33.7
Q ss_pred Ccc-eeeCCCCCCCcHHHHHHHHHHHHHHcceEEEEeCCCChhHHHHHHH
Q 041758 67 QVP-VIDLDGVRGNKLEEIVDQVRAAAETWGFFQVVNHGIPLNVLEEIIE 115 (183)
Q Consensus 67 ~IP-vIDls~l~~~~~~~~~~~l~~A~~~~GFF~v~nHGI~~~li~~~~~ 115 (183)
..| ||||+.+.......-...|...|+++|++-|--.|-..++.+.+..
T Consensus 50 ~~PvVlDl~~l~~~~~~~dl~~L~~~Lr~~gl~~vGV~g~~~~~~~~a~~ 99 (248)
T PRK04596 50 RAAVILDFGGLSQVPDLATAKALLDGLRSAGVLPVALAYGTSEIDLLSQQ 99 (248)
T ss_pred CCcEEEEchhhcCccccccHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHH
Confidence 345 6799887532111235679999999999999888877776555444
No 71
>PRK06770 hypothetical protein; Provisional
Probab=20.66 E-value=1.9e+02 Score=23.11 Aligned_cols=40 Identities=25% Similarity=0.451 Sum_probs=25.9
Q ss_pred HHHHHHHHHHcceEEEEeCCCChhHHHHHHHHHHHHhcCCHHHHHhhh
Q 041758 85 VDQVRAAAETWGFFQVVNHGIPLNVLEEIIEGIRKFNEQDVELKKEFY 132 (183)
Q Consensus 85 ~~~l~~A~~~~GFF~v~nHGI~~~li~~~~~~~~~FF~lp~eeK~~~~ 132 (183)
+.|-..|.+.|||+++ ..+-++.+.+.... ...++|..|.
T Consensus 80 tHQKV~A~~KwG~~~m-----T~enI~~l~~~i~~---sn~~~k~~yl 119 (180)
T PRK06770 80 THQKVKADEKWGFIEM-----TQENIEKLKDIINS---SNFVQKEELL 119 (180)
T ss_pred HhhhhhhhcccceEec-----CHHHHHHHHHHHhc---cchhhHHHHH
Confidence 4455579999999985 45666666655542 2356676654
No 72
>TIGR02410 carnitine_TMLD trimethyllysine dioxygenase. Members of this family with known function act as trimethyllysine dioxygenase, an enzyme in the pathway for carnitine biosynthesis from lysine. This enzyme is homologous to gamma-butyrobetaine,2-oxoglutarate dioxygenase, which catalyzes the last step in carnitine biosynthesis. Members of this family appear to be eukaryotic only.
Probab=20.40 E-value=1.4e+02 Score=26.10 Aligned_cols=51 Identities=12% Similarity=0.181 Sum_probs=35.8
Q ss_pred CcceeeCCCCCCCcHHHHHHHHHHHHHHcceEEEEeCCCChhHHHHHHHHHHHHh
Q 041758 67 QVPVIDLDGVRGNKLEEIVDQVRAAAETWGFFQVVNHGIPLNVLEEIIEGIRKFN 121 (183)
Q Consensus 67 ~IPvIDls~l~~~~~~~~~~~l~~A~~~~GFF~v~nHGI~~~li~~~~~~~~~FF 121 (183)
.+|.+|+..+..+ ..+.+.++..+..++|+..+.|-.++.+.+. +.++.|-
T Consensus 100 ~~~~~~~~~~~~~-~d~~l~~~l~~l~~~G~v~~~g~~~~~~~~~---~~a~riG 150 (362)
T TIGR02410 100 KDPSVHFKTTYDH-TDSTLKSFSKNIYKYGFTFVDNVPVTPEATE---KLCERIS 150 (362)
T ss_pred cCCceeHHHHhcc-CHHHHHHHHHHHHhhCEEEEcCCCCCHHHHH---HHHHHhc
Confidence 3577777665421 1466889999999999999999988765544 4444443
Done!