Query 041759
Match_columns 525
No_of_seqs 437 out of 2666
Neff 10.7
Searched_HMMs 46136
Date Fri Mar 29 10:20:04 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/041759.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/041759hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 TIGR00898 2A0119 cation transp 100.0 2.2E-45 4.8E-50 375.1 43.7 450 41-512 10-504 (505)
2 TIGR01299 synapt_SV2 synaptic 100.0 1.5E-42 3.3E-47 356.6 35.9 417 41-510 168-741 (742)
3 TIGR00887 2A0109 phosphate:H+ 100.0 1.8E-39 3.9E-44 330.0 31.4 417 41-514 17-500 (502)
4 KOG0253 Synaptic vesicle trans 100.0 5.6E-39 1.2E-43 287.5 26.8 412 41-510 79-527 (528)
5 KOG0569 Permease of the major 100.0 2.5E-38 5.4E-43 305.5 31.9 394 114-520 59-472 (485)
6 KOG0255 Synaptic vesicle trans 100.0 2.6E-36 5.6E-41 308.7 42.2 460 41-518 20-508 (521)
7 COG2271 UhpC Sugar phosphate p 100.0 9.8E-38 2.1E-42 287.4 27.4 394 41-501 30-432 (448)
8 PRK10077 xylE D-xylose transpo 100.0 1.5E-37 3.3E-42 315.6 31.7 422 40-522 12-477 (479)
9 PRK10642 proline/glycine betai 100.0 1.2E-36 2.5E-41 308.2 35.0 393 40-510 16-437 (490)
10 TIGR00879 SP MFS transporter, 100.0 1.3E-35 2.8E-40 301.9 29.7 423 41-510 29-478 (481)
11 PRK09556 uhpT sugar phosphate 100.0 2.2E-35 4.8E-40 297.4 30.0 393 41-502 30-448 (467)
12 PRK10406 alpha-ketoglutarate t 100.0 1.4E-34 3.1E-39 288.7 34.7 375 41-502 23-423 (432)
13 COG2814 AraJ Arabinose efflux 100.0 1.4E-34 3E-39 271.1 32.2 368 41-502 14-385 (394)
14 TIGR02332 HpaX 4-hydroxyphenyl 100.0 4.2E-35 9.1E-40 290.1 30.2 387 41-490 9-408 (412)
15 TIGR00903 2A0129 major facilit 100.0 7E-35 1.5E-39 282.3 31.0 347 100-503 14-365 (368)
16 PRK11551 putative 3-hydroxyphe 100.0 7.8E-34 1.7E-38 282.0 34.3 373 41-502 16-395 (406)
17 PRK11663 regulatory protein Uh 100.0 7.9E-34 1.7E-38 283.4 32.5 390 41-500 24-421 (434)
18 PRK03545 putative arabinose tr 100.0 1.1E-33 2.4E-38 279.0 33.1 344 100-502 32-379 (390)
19 PRK09952 shikimate transporter 100.0 2.2E-33 4.8E-38 280.1 35.3 387 34-504 16-434 (438)
20 KOG0254 Predicted transporter 100.0 6.3E-34 1.4E-38 289.2 31.1 390 115-519 89-500 (513)
21 PRK12307 putative sialic acid 100.0 2.5E-33 5.4E-38 280.3 32.3 355 41-476 19-379 (426)
22 PRK11273 glpT sn-glycerol-3-ph 100.0 1.9E-32 4.2E-37 274.8 33.7 376 100-509 52-441 (452)
23 PRK14995 methyl viologen resis 100.0 9.2E-33 2E-37 279.9 30.5 378 41-475 7-408 (495)
24 TIGR00890 2A0111 Oxalate/Forma 100.0 4.1E-33 8.9E-38 274.2 26.8 346 100-495 26-374 (377)
25 TIGR00893 2A0114 d-galactonate 100.0 7.4E-33 1.6E-37 274.4 28.7 371 100-500 17-396 (399)
26 PRK09705 cynX putative cyanate 100.0 1.9E-32 4.2E-37 269.7 30.3 350 100-510 32-389 (393)
27 PF00083 Sugar_tr: Sugar (and 100.0 7.3E-39 1.6E-43 322.5 -18.4 385 113-516 44-450 (451)
28 TIGR00894 2A0114euk Na(+)-depe 100.0 4E-32 8.7E-37 274.2 30.4 415 41-505 20-452 (465)
29 PRK15075 citrate-proton sympor 100.0 1.7E-31 3.6E-36 266.8 33.8 348 41-476 16-390 (434)
30 TIGR00891 2A0112 putative sial 100.0 8.4E-32 1.8E-36 267.6 30.2 369 40-476 12-386 (405)
31 TIGR00895 2A0115 benzoate tran 100.0 7E-32 1.5E-36 267.5 28.9 375 41-476 18-396 (398)
32 PRK10213 nepI ribonucleoside t 100.0 1.1E-30 2.3E-35 257.1 36.1 336 100-494 43-382 (394)
33 PRK05122 major facilitator sup 100.0 5E-31 1.1E-35 261.2 31.9 347 100-510 38-396 (399)
34 KOG0252 Inorganic phosphate tr 100.0 7.5E-34 1.6E-38 262.8 10.4 423 41-517 42-512 (538)
35 PRK10504 putative transporter; 100.0 4.9E-31 1.1E-35 267.0 31.5 376 41-475 11-410 (471)
36 TIGR00710 efflux_Bcr_CflA drug 100.0 1.4E-30 3.1E-35 257.0 33.7 345 100-493 28-374 (385)
37 PRK15402 multidrug efflux syst 100.0 2E-30 4.2E-35 257.4 34.6 329 100-476 36-366 (406)
38 PLN00028 nitrate transmembrane 100.0 2.6E-31 5.6E-36 267.6 28.3 355 100-502 59-432 (476)
39 PRK10489 enterobactin exporter 100.0 2.7E-31 5.9E-36 264.4 28.2 364 100-516 40-413 (417)
40 PRK10091 MFS transport protein 100.0 1.3E-30 2.9E-35 256.1 32.5 340 100-498 26-371 (382)
41 TIGR00711 efflux_EmrB drug res 100.0 4.4E-31 9.6E-36 268.8 28.4 380 41-476 3-406 (485)
42 PF07690 MFS_1: Major Facilita 100.0 1.2E-31 2.6E-36 261.3 22.9 329 100-471 19-352 (352)
43 TIGR00881 2A0104 phosphoglycer 100.0 2.3E-31 4.9E-36 262.0 25.1 345 100-476 18-368 (379)
44 PRK03893 putative sialic acid 100.0 1.4E-30 3E-35 265.7 31.4 396 41-490 21-440 (496)
45 PRK03699 putative transporter; 100.0 3.1E-30 6.8E-35 254.5 31.1 368 41-503 8-380 (394)
46 TIGR00900 2A0121 H+ Antiporter 100.0 2.1E-30 4.6E-35 253.8 29.2 329 100-476 22-359 (365)
47 TIGR00712 glpT glycerol-3-phos 100.0 2.4E-30 5.3E-35 258.7 29.2 397 41-506 28-437 (438)
48 PRK03633 putative MFS family t 100.0 7.8E-30 1.7E-34 250.6 31.7 360 42-500 8-369 (381)
49 KOG2533 Permease of the major 100.0 2.5E-30 5.3E-35 253.9 27.3 364 41-475 46-425 (495)
50 PRK15034 nitrate/nitrite trans 100.0 1.2E-29 2.6E-34 246.9 31.4 349 100-504 57-455 (462)
51 PRK15403 multidrug efflux syst 100.0 1.2E-29 2.7E-34 251.0 32.1 345 100-494 39-388 (413)
52 TIGR00892 2A0113 monocarboxyla 100.0 8.5E-31 1.8E-35 262.4 23.7 365 100-497 42-415 (455)
53 KOG2532 Permease of the major 100.0 3.5E-30 7.6E-35 252.5 27.3 363 104-502 65-446 (466)
54 PRK11102 bicyclomycin/multidru 100.0 1.2E-29 2.7E-34 249.4 30.7 357 96-502 12-371 (377)
55 PRK11043 putative transporter; 100.0 6E-29 1.3E-33 246.4 35.2 324 100-476 29-353 (401)
56 TIGR00899 2A0120 sugar efflux 100.0 1.7E-29 3.6E-34 248.4 30.7 347 100-503 20-374 (375)
57 PRK11195 lysophospholipid tran 100.0 1.4E-29 2.9E-34 249.2 29.2 346 100-497 26-374 (393)
58 TIGR00897 2A0118 polyol permea 100.0 7E-29 1.5E-33 245.5 33.7 356 100-502 36-400 (402)
59 PRK09874 drug efflux system pr 100.0 2E-29 4.2E-34 250.8 29.9 347 100-501 37-396 (408)
60 PRK10133 L-fucose transporter; 100.0 7.7E-29 1.7E-33 246.4 32.3 343 42-476 28-403 (438)
61 PRK12382 putative transporter; 100.0 9E-29 1.9E-33 244.4 31.8 338 100-501 38-387 (392)
62 PRK11652 emrD multidrug resist 100.0 2.4E-28 5.2E-33 241.5 34.7 324 100-477 31-357 (394)
63 PRK10473 multidrug efflux syst 100.0 2.6E-28 5.7E-33 241.1 33.2 321 100-476 26-349 (392)
64 PRK10054 putative transporter; 100.0 2.1E-28 4.5E-33 240.9 30.6 341 100-495 31-376 (395)
65 TIGR00883 2A0106 metabolite-pr 100.0 9E-29 2E-33 244.9 26.7 329 100-476 16-371 (394)
66 KOG1330 Sugar transporter/spin 100.0 2.1E-31 4.6E-36 248.0 6.3 359 41-475 34-407 (493)
67 PRK11646 multidrug resistance 100.0 3.2E-28 6.9E-33 240.0 28.7 343 100-498 34-383 (400)
68 cd06174 MFS The Major Facilita 100.0 4.6E-28 1E-32 235.9 29.5 324 100-501 22-350 (352)
69 TIGR00885 fucP L-fucose:H+ sym 100.0 4.9E-28 1.1E-32 238.6 29.1 340 42-476 5-377 (410)
70 PRK11010 ampG muropeptide tran 100.0 2.6E-27 5.7E-32 238.8 33.4 356 100-505 35-405 (491)
71 COG2223 NarK Nitrate/nitrite t 100.0 6E-28 1.3E-32 223.5 24.0 353 100-504 37-402 (417)
72 TIGR00886 2A0108 nitrite extru 100.0 2.8E-28 6.1E-33 238.9 21.3 327 100-466 24-365 (366)
73 PRK15011 sugar efflux transpor 100.0 2.3E-26 4.9E-31 226.8 33.2 345 101-504 40-392 (393)
74 TIGR00902 2A0127 phenyl propri 100.0 1E-26 2.3E-31 228.3 29.8 340 100-498 27-374 (382)
75 TIGR00896 CynX cyanate transpo 100.0 4.6E-27 9.9E-32 229.0 26.3 319 96-476 21-344 (355)
76 TIGR00889 2A0110 nucleoside tr 100.0 2.6E-26 5.7E-31 227.3 27.6 354 100-507 26-407 (418)
77 KOG2504 Monocarboxylate transp 100.0 4.6E-27 9.9E-32 233.6 20.3 388 99-503 68-476 (509)
78 TIGR00792 gph sugar (Glycoside 100.0 1.3E-25 2.9E-30 225.3 30.9 327 100-475 23-375 (437)
79 PRK08633 2-acyl-glycerophospho 100.0 6E-26 1.3E-30 254.6 31.5 332 101-476 34-380 (1146)
80 PRK11902 ampG muropeptide tran 100.0 2.4E-25 5.2E-30 220.4 32.2 352 100-504 22-391 (402)
81 PRK11128 putative 3-phenylprop 99.9 1.6E-25 3.4E-30 220.1 28.8 339 100-497 27-373 (382)
82 TIGR00901 2A0125 AmpG-related 99.9 4.7E-26 1E-30 222.0 23.9 317 100-464 11-355 (356)
83 PRK09528 lacY galactoside perm 99.9 1.7E-25 3.6E-30 222.9 26.1 351 100-501 34-401 (420)
84 PRK06814 acylglycerophosphoeth 99.9 3.5E-25 7.5E-30 247.5 31.2 332 102-476 41-392 (1140)
85 TIGR00882 2A0105 oligosacchari 99.9 1.6E-24 3.5E-29 214.2 29.8 349 102-499 28-391 (396)
86 TIGR00806 rfc RFC reduced fola 99.9 3.2E-25 7E-30 211.3 21.6 352 100-472 49-407 (511)
87 PF05977 MFS_3: Transmembrane 99.9 7.4E-24 1.6E-28 211.8 29.8 341 113-501 43-392 (524)
88 PRK10207 dipeptide/tripeptide 99.9 6.5E-24 1.4E-28 213.0 28.6 384 100-501 38-474 (489)
89 COG0738 FucP Fucose permease [ 99.9 6.6E-24 1.4E-28 195.3 25.3 319 100-476 36-380 (422)
90 KOG2615 Permease of the major 99.9 2.7E-24 5.8E-29 195.1 19.3 325 113-476 66-410 (451)
91 PTZ00207 hypothetical protein; 99.9 1.1E-23 2.4E-28 211.0 25.4 385 100-502 50-551 (591)
92 TIGR02718 sider_RhtX_FptX side 99.9 2.8E-22 6E-27 197.8 32.5 370 42-497 3-385 (390)
93 KOG3764 Vesicular amine transp 99.9 1.9E-24 4.2E-29 197.2 14.7 337 113-502 104-453 (464)
94 TIGR00924 yjdL_sub1_fam amino 99.9 1.9E-22 4.1E-27 202.5 29.7 372 107-499 43-464 (475)
95 TIGR00805 oat sodium-independe 99.9 4.9E-24 1.1E-28 219.7 17.6 282 100-406 56-415 (633)
96 COG2807 CynX Cyanate permease 99.9 1.5E-21 3.3E-26 177.0 24.0 340 100-499 35-381 (395)
97 PF06609 TRI12: Fungal trichot 99.9 2E-21 4.4E-26 193.3 26.3 358 100-474 67-461 (599)
98 PF11700 ATG22: Vacuole efflux 99.9 3.6E-20 7.8E-25 183.5 33.8 359 113-508 68-473 (477)
99 PRK09669 putative symporter Ya 99.9 7.1E-21 1.5E-25 190.8 29.3 325 100-475 33-383 (444)
100 PRK09584 tppB putative tripept 99.9 8.1E-21 1.8E-25 191.9 29.8 372 100-497 45-473 (500)
101 TIGR01301 GPH_sucrose GPH fami 99.9 4E-20 8.8E-25 181.8 33.2 377 100-506 27-475 (477)
102 PF03825 Nuc_H_symport: Nucleo 99.9 3.3E-20 7.2E-25 180.4 29.8 324 100-476 25-360 (400)
103 TIGR00788 fbt folate/biopterin 99.9 5.5E-21 1.2E-25 191.4 23.9 343 100-475 49-408 (468)
104 PRK10429 melibiose:sodium symp 99.9 4.9E-20 1.1E-24 185.9 30.6 333 100-475 30-388 (473)
105 KOG4686 Predicted sugar transp 99.9 1.1E-21 2.4E-26 170.6 14.0 360 92-504 60-444 (459)
106 PRK09848 glucuronide transport 99.9 6.4E-19 1.4E-23 177.1 31.6 324 100-475 32-383 (448)
107 PRK11462 putative transporter; 99.8 2.2E-18 4.9E-23 172.5 30.1 324 100-475 33-382 (460)
108 COG2211 MelB Na+/melibiose sym 99.8 3.8E-18 8.2E-23 164.1 29.2 329 100-475 36-391 (467)
109 PF13347 MFS_2: MFS/sugar tran 99.8 2.2E-19 4.9E-24 179.1 21.8 326 100-475 25-379 (428)
110 COG2270 Permeases of the major 99.8 2E-18 4.3E-23 160.5 25.4 352 113-508 56-434 (438)
111 PRK15462 dipeptide/tripeptide 99.8 3.2E-17 7E-22 162.0 31.8 349 102-476 35-436 (493)
112 PF01306 LacY_symp: LacY proto 99.8 2.6E-18 5.6E-23 163.7 22.6 356 102-506 33-404 (412)
113 TIGR01272 gluP glucose/galacto 99.8 3.5E-17 7.6E-22 154.9 22.2 271 164-486 5-298 (310)
114 KOG2563 Permease of the major 99.8 6.4E-17 1.4E-21 151.3 20.3 323 113-476 77-417 (480)
115 PF03209 PUCC: PUCC protein; 99.7 5.4E-14 1.2E-18 131.8 30.9 326 102-475 5-358 (403)
116 PF03137 OATP: Organic Anion T 99.7 1.3E-17 2.7E-22 167.8 -0.1 359 100-476 26-510 (539)
117 COG3104 PTR2 Dipeptide/tripept 99.7 2.8E-14 6.1E-19 136.2 22.2 379 100-500 49-484 (498)
118 KOG3626 Organic anion transpor 99.6 9.1E-15 2E-19 146.9 18.4 303 41-404 98-475 (735)
119 KOG2325 Predicted transporter/ 99.6 2.9E-15 6.4E-20 144.5 13.2 149 106-259 65-233 (488)
120 PRK10642 proline/glycine betai 99.6 6.9E-15 1.5E-19 149.4 14.5 171 103-278 277-457 (490)
121 TIGR00880 2_A_01_02 Multidrug 99.6 4.7E-15 1E-19 123.5 8.8 137 120-257 3-140 (141)
122 PF03092 BT1: BT1 family; Int 99.6 2.2E-13 4.9E-18 134.7 19.8 373 100-508 13-418 (433)
123 KOG2816 Predicted transporter 99.6 2.4E-12 5.2E-17 126.4 26.6 312 123-475 70-387 (463)
124 PRK09528 lacY galactoside perm 99.5 3E-13 6.4E-18 134.9 12.3 145 113-258 260-406 (420)
125 TIGR00889 2A0110 nucleoside tr 99.5 2.1E-13 4.6E-18 135.3 10.9 145 114-259 250-406 (418)
126 PF01770 Folate_carrier: Reduc 99.4 2E-11 4.3E-16 116.1 21.9 346 101-467 28-389 (412)
127 TIGR01299 synapt_SV2 synaptic 99.4 4.5E-13 9.8E-18 139.2 10.7 141 117-259 597-737 (742)
128 PRK15011 sugar efflux transpor 99.4 1.8E-12 3.9E-17 128.0 13.6 150 102-257 242-392 (393)
129 TIGR00890 2A0111 Oxalate/Forma 99.4 1.5E-12 3.3E-17 127.9 12.4 145 100-248 228-375 (377)
130 cd06174 MFS The Major Facilita 99.4 5E-12 1.1E-16 122.9 13.4 145 100-248 198-345 (352)
131 PRK05122 major facilitator sup 99.4 1.2E-11 2.6E-16 122.7 14.8 135 117-252 251-386 (399)
132 TIGR00899 2A0120 sugar efflux 99.3 1.6E-11 3.4E-16 120.7 15.1 149 103-257 226-375 (375)
133 PRK12382 putative transporter; 99.3 9.4E-12 2E-16 123.0 13.5 136 117-253 251-387 (392)
134 PRK10489 enterobactin exporter 99.3 3E-11 6.4E-16 120.5 15.4 189 313-505 9-199 (417)
135 TIGR00892 2A0113 monocarboxyla 99.3 1.3E-11 2.7E-16 124.1 11.4 145 100-248 264-414 (455)
136 TIGR00900 2A0121 H+ Antiporter 99.3 6.2E-11 1.3E-15 115.9 15.7 170 328-501 6-177 (365)
137 PRK03545 putative arabinose tr 99.3 8.3E-11 1.8E-15 116.1 16.6 149 101-255 230-380 (390)
138 TIGR00902 2A0127 phenyl propri 99.3 5.9E-11 1.3E-15 116.7 15.3 143 100-248 228-372 (382)
139 PRK10054 putative transporter; 99.3 1.6E-10 3.4E-15 114.1 18.1 173 324-505 10-185 (395)
140 PRK09874 drug efflux system pr 99.3 2.9E-11 6.4E-16 120.3 13.0 137 116-253 259-396 (408)
141 PRK11551 putative 3-hydroxyphe 99.3 4.1E-11 8.8E-16 119.1 13.0 145 100-248 243-389 (406)
142 PF05631 DUF791: Protein of un 99.3 3E-10 6.5E-15 105.1 16.9 151 102-257 59-218 (354)
143 PF07690 MFS_1: Major Facilita 99.3 1.7E-10 3.6E-15 112.3 16.3 159 331-498 6-167 (352)
144 PRK03633 putative MFS family t 99.2 1.4E-10 2.9E-15 114.2 14.8 142 100-248 223-365 (381)
145 TIGR00879 SP MFS transporter, 99.2 4.9E-11 1.1E-15 121.3 12.0 156 100-259 307-474 (481)
146 PRK10077 xylE D-xylose transpo 99.2 1.1E-10 2.5E-15 118.7 14.4 156 100-259 294-461 (479)
147 TIGR02332 HpaX 4-hydroxyphenyl 99.2 3.8E-10 8.1E-15 112.1 17.7 159 340-507 27-194 (412)
148 KOG3762 Predicted transporter 99.2 4.5E-10 9.8E-15 107.9 17.1 177 315-500 365-544 (618)
149 PRK10473 multidrug efflux syst 99.2 5.7E-10 1.2E-14 110.3 18.7 167 332-507 14-183 (392)
150 KOG3098 Uncharacterized conser 99.2 6.1E-09 1.3E-13 101.0 24.7 311 121-475 56-409 (461)
151 PRK09556 uhpT sugar phosphate 99.2 9.1E-11 2E-15 118.6 12.8 143 102-248 284-442 (467)
152 PRK11663 regulatory protein Uh 99.2 3.7E-10 7.9E-15 113.1 16.8 156 341-505 43-201 (434)
153 PRK10213 nepI ribonucleoside t 99.2 1E-09 2.3E-14 108.2 19.7 153 344-505 43-198 (394)
154 TIGR00710 efflux_Bcr_CflA drug 99.2 3.9E-10 8.5E-15 111.2 16.7 159 340-507 24-185 (385)
155 PRK11195 lysophospholipid tran 99.2 3.7E-10 7.9E-15 111.4 16.4 172 322-505 4-176 (393)
156 TIGR00893 2A0114 d-galactonate 99.2 3E-10 6.5E-15 112.3 15.6 158 339-505 12-172 (399)
157 TIGR00891 2A0112 putative sial 99.2 5.1E-10 1.1E-14 111.2 17.3 156 341-505 32-191 (405)
158 TIGR00897 2A0118 polyol permea 99.2 1.9E-10 4E-15 114.0 14.0 143 100-248 245-394 (402)
159 PRK10091 MFS transport protein 99.2 8.5E-10 1.8E-14 108.6 18.4 172 326-506 8-182 (382)
160 PRK03699 putative transporter; 99.2 7.8E-11 1.7E-15 116.4 10.6 151 100-256 228-380 (394)
161 TIGR00924 yjdL_sub1_fam amino 99.2 3.1E-10 6.7E-15 114.4 14.8 160 334-502 23-191 (475)
162 PRK12307 putative sialic acid 99.2 6.4E-10 1.4E-14 111.3 17.1 142 338-488 35-178 (426)
163 TIGR00883 2A0106 metabolite-pr 99.2 1.2E-10 2.7E-15 115.0 11.8 139 103-245 246-391 (394)
164 PRK09705 cynX putative cyanate 99.2 2.5E-10 5.5E-15 112.6 13.6 154 100-259 228-385 (393)
165 COG2814 AraJ Arabinose efflux 99.2 1.7E-09 3.8E-14 102.6 17.6 155 340-503 32-189 (394)
166 COG2271 UhpC Sugar phosphate p 99.2 2.9E-10 6.3E-15 106.5 12.0 154 342-504 50-208 (448)
167 PRK11646 multidrug resistance 99.2 2.4E-09 5.3E-14 105.8 19.2 170 326-504 15-187 (400)
168 TIGR00895 2A0115 benzoate tran 99.2 7.2E-10 1.6E-14 109.8 15.5 158 339-505 35-195 (398)
169 PLN00028 nitrate transmembrane 99.2 2.4E-09 5.3E-14 108.3 19.5 151 343-503 58-219 (476)
170 PRK10504 putative transporter; 99.1 2.1E-09 4.6E-14 109.0 18.3 155 336-499 25-181 (471)
171 PRK15462 dipeptide/tripeptide 99.1 1.2E-09 2.7E-14 108.5 16.0 153 340-500 28-186 (493)
172 PF05977 MFS_3: Transmembrane 99.1 1.7E-09 3.7E-14 108.9 17.1 183 316-502 5-189 (524)
173 TIGR00792 gph sugar (Glycoside 99.1 2.6E-09 5.6E-14 107.3 18.5 120 113-233 255-383 (437)
174 PRK11128 putative 3-phenylprop 99.1 8.9E-10 1.9E-14 108.4 14.8 140 103-248 231-372 (382)
175 PRK09952 shikimate transporter 99.1 9.7E-10 2.1E-14 110.1 15.1 152 102-258 276-435 (438)
176 PRK11043 putative transporter; 99.1 4.2E-09 9.2E-14 104.5 19.4 152 345-505 30-183 (401)
177 TIGR00711 efflux_EmrB drug res 99.1 1.3E-09 2.7E-14 111.2 15.9 162 335-505 16-180 (485)
178 TIGR00885 fucP L-fucose:H+ sym 99.1 3.6E-09 7.7E-14 104.7 18.0 133 337-475 19-151 (410)
179 PRK15403 multidrug efflux syst 99.1 3.7E-09 8E-14 105.0 18.1 154 344-506 39-195 (413)
180 PRK03893 putative sialic acid 99.1 2.9E-09 6.2E-14 108.9 17.7 141 339-488 38-180 (496)
181 PRK11273 glpT sn-glycerol-3-ph 99.1 1.2E-09 2.6E-14 110.0 14.5 145 100-248 276-428 (452)
182 TIGR00882 2A0105 oligosacchari 99.1 8.7E-10 1.9E-14 109.1 13.2 137 113-250 252-390 (396)
183 TIGR00712 glpT glycerol-3-phos 99.1 2.1E-09 4.5E-14 107.9 15.4 157 343-505 49-209 (438)
184 TIGR00881 2A0104 phosphoglycer 99.1 4.2E-10 9.1E-15 110.6 10.2 156 340-504 14-173 (379)
185 PRK14995 methyl viologen resis 99.1 6.3E-09 1.4E-13 105.9 18.9 159 338-505 23-185 (495)
186 PRK15402 multidrug efflux syst 99.1 5.4E-09 1.2E-13 103.9 18.0 155 343-506 35-192 (406)
187 PRK15034 nitrate/nitrite trans 99.1 1.4E-08 3.1E-13 99.9 20.0 115 350-469 64-178 (462)
188 TIGR00898 2A0119 cation transp 99.1 1.4E-09 3.1E-14 111.3 13.7 135 122-259 362-498 (505)
189 PRK11102 bicyclomycin/multidru 99.1 3E-09 6.4E-14 104.6 15.4 155 342-505 12-169 (377)
190 PRK11652 emrD multidrug resist 99.0 1.3E-08 2.8E-13 100.7 18.9 154 344-506 31-187 (394)
191 PRK09584 tppB putative tripept 99.0 6.2E-09 1.3E-13 105.7 16.5 173 316-496 15-194 (500)
192 TIGR00886 2A0108 nitrite extru 99.0 7.6E-09 1.6E-13 101.3 16.6 124 342-475 22-147 (366)
193 PF11700 ATG22: Vacuole efflux 99.0 3.9E-09 8.4E-14 105.2 14.5 152 101-257 306-469 (477)
194 PF02487 CLN3: CLN3 protein; 99.0 7.6E-08 1.7E-12 91.9 22.2 324 117-475 61-392 (402)
195 TIGR00880 2_A_01_02 Multidrug 99.0 1.1E-08 2.4E-13 84.7 14.1 125 372-501 10-136 (141)
196 TIGR00887 2A0109 phosphate:H+ 99.0 8.6E-09 1.9E-13 105.3 15.9 149 353-505 53-227 (502)
197 PRK11010 ampG muropeptide tran 99.0 3.3E-09 7.2E-14 107.5 12.5 152 101-257 247-404 (491)
198 TIGR00903 2A0129 major facilit 99.0 1.9E-08 4E-13 98.0 16.6 155 342-506 12-169 (368)
199 PRK10207 dipeptide/tripeptide 99.0 1.2E-08 2.7E-13 102.9 15.3 150 345-502 39-193 (489)
200 PRK10406 alpha-ketoglutarate t 99.0 2.8E-08 6.2E-13 99.5 17.7 134 372-505 75-221 (432)
201 TIGR02718 sider_RhtX_FptX side 98.9 9.4E-09 2E-13 101.5 13.5 144 101-248 232-384 (390)
202 TIGR00894 2A0114euk Na(+)-depe 98.9 7E-09 1.5E-13 105.0 12.6 145 350-501 70-217 (465)
203 TIGR00806 rfc RFC reduced fola 98.9 5.1E-08 1.1E-12 94.4 17.6 154 341-504 46-204 (511)
204 PRK08633 2-acyl-glycerophospho 98.9 5.2E-09 1.1E-13 118.3 12.4 142 102-247 258-402 (1146)
205 PF01306 LacY_symp: LacY proto 98.9 1E-08 2.2E-13 98.5 11.9 145 113-258 257-403 (412)
206 PRK15075 citrate-proton sympor 98.9 1E-08 2.2E-13 102.8 12.6 131 100-234 261-398 (434)
207 KOG2615 Permease of the major 98.9 5.8E-09 1.3E-13 96.2 9.4 115 352-476 64-178 (451)
208 PRK10133 L-fucose transporter; 98.9 7.9E-08 1.7E-12 96.1 18.5 132 338-475 43-174 (438)
209 PF06813 Nodulin-like: Nodulin 98.9 9.4E-09 2E-13 92.3 10.4 154 99-259 24-185 (250)
210 TIGR01272 gluP glucose/galacto 98.9 2.6E-08 5.6E-13 94.5 13.9 133 106-245 172-305 (310)
211 KOG1330 Sugar transporter/spin 98.9 7E-10 1.5E-14 105.0 3.0 174 326-508 34-215 (493)
212 PRK11902 ampG muropeptide tran 98.9 1.2E-07 2.6E-12 94.0 19.2 164 335-506 13-185 (402)
213 KOG2504 Monocarboxylate transp 98.9 7.3E-09 1.6E-13 103.9 9.8 152 100-256 321-476 (509)
214 COG2270 Permeases of the major 98.9 1.9E-08 4.2E-13 94.6 11.5 150 104-258 280-431 (438)
215 KOG0569 Permease of the major 98.9 2.8E-08 6.1E-13 97.4 13.0 155 100-259 293-458 (485)
216 KOG4332 Predicted sugar transp 98.9 8.4E-08 1.8E-12 84.0 14.4 347 100-498 60-426 (454)
217 KOG0253 Synaptic vesicle trans 98.8 1.4E-08 3E-13 93.2 9.4 129 125-256 391-519 (528)
218 PF06963 FPN1: Ferroportin1 (F 98.8 2.3E-06 4.9E-11 83.6 25.4 336 118-474 41-412 (432)
219 TIGR00805 oat sodium-independe 98.8 1.4E-08 3E-13 105.6 10.7 131 342-476 54-230 (633)
220 PRK10429 melibiose:sodium symp 98.8 1.8E-07 3.9E-12 94.8 18.5 115 113-228 264-391 (473)
221 PRK09848 glucuronide transport 98.8 1.3E-07 2.8E-12 95.3 17.3 121 104-228 256-386 (448)
222 TIGR00769 AAA ADP/ATP carrier 98.8 2.8E-05 6E-10 77.0 32.9 272 100-402 26-345 (472)
223 PRK06814 acylglycerophosphoeth 98.8 2E-08 4.4E-13 113.2 11.9 142 103-248 252-415 (1140)
224 PTZ00207 hypothetical protein; 98.8 1.7E-07 3.6E-12 95.1 16.9 148 345-498 51-200 (591)
225 PF03825 Nuc_H_symport: Nucleo 98.8 1E-07 2.2E-12 93.2 14.6 152 103-258 233-398 (400)
226 KOG3810 Micronutrient transpor 98.8 4.6E-08 1E-12 88.9 11.0 358 120-502 47-420 (433)
227 TIGR00901 2A0125 AmpG-related 98.8 2.4E-07 5.2E-12 90.3 17.1 159 339-505 6-181 (356)
228 KOG3764 Vesicular amine transp 98.8 1.6E-08 3.4E-13 94.0 8.1 144 352-504 102-248 (464)
229 COG0477 ProP Permeases of the 98.8 6.6E-08 1.4E-12 92.0 12.3 144 100-247 25-177 (338)
230 COG2223 NarK Nitrate/nitrite t 98.8 1.8E-07 3.8E-12 88.2 14.2 148 345-500 38-190 (417)
231 TIGR00896 CynX cyanate transpo 98.8 6.9E-08 1.5E-12 94.1 11.8 125 100-229 220-347 (355)
232 TIGR01301 GPH_sucrose GPH fami 98.7 4.5E-07 9.7E-12 90.1 17.4 168 335-506 18-222 (477)
233 TIGR00926 2A1704 Peptide:H+ sy 98.7 7.6E-07 1.6E-11 92.1 19.6 147 102-251 13-178 (654)
234 KOG0255 Synaptic vesicle trans 98.7 6.7E-08 1.5E-12 99.3 12.0 146 351-506 113-258 (521)
235 PRK09669 putative symporter Ya 98.7 5.9E-07 1.3E-11 90.4 17.4 112 116-228 265-386 (444)
236 KOG2532 Permease of the major 98.7 3.7E-07 8.1E-12 90.6 14.7 146 350-502 67-215 (466)
237 PF13347 MFS_2: MFS/sugar tran 98.7 2.2E-07 4.8E-12 92.9 13.3 114 114-228 259-382 (428)
238 COG3104 PTR2 Dipeptide/tripept 98.7 7.6E-08 1.7E-12 92.8 8.5 145 351-503 56-206 (498)
239 KOG0637 Sucrose transporter an 98.7 2E-08 4.2E-13 95.1 4.2 125 100-227 55-201 (498)
240 COG0738 FucP Fucose permease [ 98.6 1.5E-06 3.2E-11 81.6 14.9 132 338-475 30-161 (422)
241 PF06609 TRI12: Fungal trichot 98.6 7.3E-07 1.6E-11 90.0 13.8 144 344-498 67-212 (599)
242 PF13000 Acatn: Acetyl-coenzym 98.6 1.3E-05 2.7E-10 77.5 20.0 270 181-468 130-455 (544)
243 KOG4686 Predicted sugar transp 98.5 3.5E-07 7.6E-12 81.0 8.7 141 102-248 290-436 (459)
244 KOG0254 Predicted transporter 98.5 1.2E-06 2.6E-11 89.6 13.5 138 359-505 92-232 (513)
245 COG2211 MelB Na+/melibiose sym 98.5 1.8E-05 4E-10 77.2 18.9 115 113-228 270-394 (467)
246 KOG3574 Acetyl-CoA transporter 98.5 1.9E-05 4.1E-10 73.3 17.6 339 41-468 32-419 (510)
247 TIGR00788 fbt folate/biopterin 98.4 5.5E-07 1.2E-11 90.7 8.0 148 105-257 281-447 (468)
248 PF06779 DUF1228: Protein of u 98.4 3.1E-07 6.7E-12 66.4 4.3 73 95-173 12-84 (85)
249 PF06813 Nodulin-like: Nodulin 98.4 1E-05 2.2E-10 72.9 14.3 152 345-502 26-181 (250)
250 PRK11462 putative transporter; 98.4 1.4E-05 3.1E-10 80.5 16.7 109 115-224 263-380 (460)
251 TIGR00939 2a57 Equilibrative N 98.3 0.00014 3.1E-09 71.9 22.6 56 419-474 373-428 (437)
252 KOG2533 Permease of the major 98.3 1.3E-05 2.8E-10 80.0 14.5 149 349-506 74-231 (495)
253 KOG0252 Inorganic phosphate tr 98.3 2.4E-06 5.3E-11 81.2 8.6 127 128-259 361-501 (538)
254 COG2807 CynX Cyanate permease 98.3 1.7E-05 3.7E-10 73.5 12.6 149 100-252 231-382 (395)
255 PF03209 PUCC: PUCC protein; 98.2 0.00013 2.8E-09 69.4 18.2 145 101-248 233-391 (403)
256 PF03219 TLC: TLC ATP/ADP tran 98.2 0.0033 7.1E-08 62.9 28.2 110 114-224 57-199 (491)
257 PF00083 Sugar_tr: Sugar (and 98.1 5.8E-08 1.3E-12 98.0 -7.2 144 356-505 46-194 (451)
258 PF05978 UNC-93: Ion channel r 98.1 1.8E-05 4E-10 65.6 8.9 107 119-227 41-147 (156)
259 KOG3762 Predicted transporter 98.1 1.9E-06 4.2E-11 83.5 3.4 135 113-248 404-540 (618)
260 KOG2325 Predicted transporter/ 98.1 4E-05 8.6E-10 75.1 11.3 155 347-506 60-233 (488)
261 COG3202 ATP/ADP translocase [E 98.0 0.0079 1.7E-07 58.6 25.3 127 100-227 46-206 (509)
262 PF05631 DUF791: Protein of un 97.9 0.001 2.2E-08 62.4 17.1 149 349-507 62-221 (354)
263 KOG1237 H+/oligopeptide sympor 97.9 0.0025 5.5E-08 65.1 21.4 146 100-248 61-238 (571)
264 KOG1479 Nucleoside transporter 97.7 0.0031 6.7E-08 60.3 16.7 55 419-473 344-398 (406)
265 PF12832 MFS_1_like: MFS_1 lik 97.6 0.00027 5.8E-09 50.9 6.3 53 100-156 23-75 (77)
266 TIGR00926 2A1704 Peptide:H+ sy 97.5 0.0015 3.2E-08 68.1 13.4 148 350-501 17-180 (654)
267 TIGR00769 AAA ADP/ATP carrier 97.4 0.021 4.6E-07 56.9 19.4 148 325-476 7-187 (472)
268 PF05978 UNC-93: Ion channel r 97.4 0.0052 1.1E-07 51.1 12.8 95 375-475 52-146 (156)
269 KOG2816 Predicted transporter 97.4 0.0034 7.5E-08 62.4 13.4 120 100-224 265-385 (463)
270 KOG2563 Permease of the major 97.3 0.0052 1.1E-07 59.2 13.0 102 372-473 91-195 (480)
271 PF03092 BT1: BT1 family; Int 97.3 0.0058 1.3E-07 60.9 14.1 154 345-504 14-177 (433)
272 PF12832 MFS_1_like: MFS_1 lik 97.2 0.0017 3.6E-08 46.8 6.9 65 332-400 11-75 (77)
273 KOG3880 Predicted small molecu 97.1 0.0024 5.2E-08 57.9 8.2 134 118-258 65-202 (409)
274 PF00854 PTR2: POT family; In 97.1 0.0015 3.2E-08 64.1 7.2 105 147-251 2-119 (372)
275 PF02487 CLN3: CLN3 protein; 96.9 0.025 5.3E-07 54.8 13.7 112 113-229 279-395 (402)
276 PF01733 Nucleoside_tran: Nucl 96.9 0.00032 6.9E-09 66.5 0.6 54 420-473 250-303 (309)
277 PF06963 FPN1: Ferroportin1 (F 96.8 0.025 5.3E-07 55.7 13.5 126 100-229 281-416 (432)
278 PF07672 MFS_Mycoplasma: Mycop 96.5 0.079 1.7E-06 47.5 12.8 50 201-250 2-57 (267)
279 COG0477 ProP Permeases of the 96.4 0.063 1.4E-06 50.4 13.0 112 357-475 40-153 (338)
280 PF03137 OATP: Organic Anion T 96.4 0.00052 1.1E-08 69.9 -1.6 130 342-475 24-198 (539)
281 KOG3626 Organic anion transpor 96.1 0.024 5.1E-07 58.8 8.4 160 345-508 121-348 (735)
282 KOG3098 Uncharacterized conser 96.0 0.11 2.3E-06 51.4 12.1 110 114-224 278-407 (461)
283 PF01770 Folate_carrier: Reduc 95.9 0.67 1.4E-05 45.2 16.8 125 375-505 56-184 (412)
284 PRK03612 spermidine synthase; 95.7 0.11 2.4E-06 52.9 11.5 136 107-248 45-190 (521)
285 PF03219 TLC: TLC ATP/ADP tran 95.7 1.8 3.9E-05 43.6 19.7 148 324-475 23-201 (491)
286 KOG3097 Predicted membrane pro 95.7 0.42 9.2E-06 44.3 13.7 98 125-224 68-180 (390)
287 PRK03612 spermidine synthase; 95.7 0.51 1.1E-05 48.2 16.0 121 351-476 45-167 (521)
288 TIGR00939 2a57 Equilibrative N 95.5 0.67 1.4E-05 46.2 15.7 111 116-228 308-431 (437)
289 KOG0637 Sucrose transporter an 95.3 0.044 9.5E-07 53.1 6.5 142 331-476 42-201 (498)
290 PF00854 PTR2: POT family; In 95.3 0.17 3.6E-06 49.6 11.0 112 391-502 2-122 (372)
291 KOG1479 Nucleoside transporter 94.7 0.22 4.8E-06 48.0 9.4 113 113-227 280-401 (406)
292 PF06779 DUF1228: Protein of u 94.6 0.09 1.9E-06 38.3 5.1 67 343-413 14-80 (85)
293 KOG2601 Iron transporter [Inor 92.4 5.9 0.00013 37.9 14.0 40 435-474 403-442 (503)
294 COG3202 ATP/ADP translocase [E 92.3 9.5 0.00021 38.0 16.0 149 324-476 26-206 (509)
295 KOG4332 Predicted sugar transp 91.1 1.6 3.6E-05 39.4 8.6 131 116-248 283-424 (454)
296 PF01733 Nucleoside_tran: Nucl 88.7 0.14 3.1E-06 48.5 0.3 110 119-228 186-307 (309)
297 KOG3574 Acetyl-CoA transporter 86.8 32 0.00069 33.4 14.5 127 338-471 48-186 (510)
298 KOG2881 Predicted membrane pro 83.9 17 0.00036 32.6 10.3 31 378-408 258-288 (294)
299 KOG3880 Predicted small molecu 82.3 3.4 7.3E-05 38.3 5.6 113 114-229 287-402 (409)
300 KOG4830 Predicted sugar transp 82.1 0.45 9.8E-06 42.5 0.2 45 101-149 41-94 (412)
301 COG5336 Uncharacterized protei 76.8 8.9 0.00019 29.0 5.4 44 115-158 42-85 (116)
302 PF07672 MFS_Mycoplasma: Mycop 73.9 24 0.00052 32.1 8.4 106 116-222 142-256 (267)
303 COG5336 Uncharacterized protei 71.3 8.4 0.00018 29.1 4.1 32 375-406 57-89 (116)
304 PF09527 ATPase_gene1: Putativ 68.3 18 0.0004 23.7 5.1 38 122-159 7-44 (55)
305 TIGR02230 ATPase_gene1 F0F1-AT 65.9 17 0.00038 27.4 4.9 36 124-159 51-86 (100)
306 KOG1237 H+/oligopeptide sympor 65.5 82 0.0018 32.8 11.5 126 375-500 88-242 (571)
307 PF06912 DUF1275: Protein of u 63.4 1E+02 0.0023 27.0 10.6 37 122-159 53-92 (209)
308 KOG3810 Micronutrient transpor 62.7 10 0.00023 35.9 4.0 99 114-213 270-370 (433)
309 COG4262 Predicted spermidine s 62.0 70 0.0015 30.6 9.0 83 113-196 41-132 (508)
310 PF11299 DUF3100: Protein of u 52.7 6.6 0.00014 34.5 0.9 107 92-226 121-227 (241)
311 COG4262 Predicted spermidine s 52.4 2.3E+02 0.0049 27.4 12.0 28 418-445 105-132 (508)
312 PF11947 DUF3464: Protein of u 49.3 1.4E+02 0.003 24.7 7.9 36 434-469 110-145 (153)
313 COG4769 Predicted membrane pro 48.1 20 0.00042 29.7 2.9 53 123-182 81-133 (181)
314 PF02990 EMP70: Endomembrane p 39.8 1.6E+02 0.0035 30.3 8.7 19 372-390 309-327 (521)
315 KOG3097 Predicted membrane pro 38.8 1.1E+02 0.0024 29.1 6.5 66 375-446 73-138 (390)
316 PF11947 DUF3464: Protein of u 37.8 82 0.0018 26.0 5.0 50 168-220 96-145 (153)
317 PF06645 SPC12: Microsomal sig 34.6 1.5E+02 0.0033 21.1 5.4 49 206-259 9-57 (76)
318 TIGR02230 ATPase_gene1 F0F1-AT 34.2 1.8E+02 0.0038 22.1 5.9 30 375-404 58-87 (100)
319 COG1268 BioY Uncharacterized c 33.2 1.2E+02 0.0027 26.0 5.6 23 122-145 89-111 (184)
320 TIGR01666 YCCS hypothetical me 33.2 3E+02 0.0065 29.6 9.6 54 134-187 42-99 (704)
321 KOG2601 Iron transporter [Inor 32.0 5.1E+02 0.011 25.5 10.7 25 375-399 78-102 (503)
322 PF06027 DUF914: Eukaryotic pr 31.6 4.7E+02 0.01 25.1 10.7 18 319-336 128-145 (334)
323 TIGR01667 YCCS_YHJK integral m 29.3 4.3E+02 0.0092 28.5 10.0 56 133-188 41-100 (701)
324 PF03547 Mem_trans: Membrane t 28.8 4.9E+02 0.011 25.3 10.1 14 375-388 10-23 (385)
325 PTZ00370 STEVOR; Provisional 28.5 64 0.0014 29.6 3.3 23 488-510 264-286 (296)
326 PF10785 NADH-u_ox-rdase: NADH 28.3 2E+02 0.0043 21.2 5.2 39 130-169 33-78 (86)
327 PF02632 BioY: BioY family; I 28.1 1.9E+02 0.0042 23.8 5.8 26 121-147 59-84 (148)
328 PF12670 DUF3792: Protein of u 26.9 3.1E+02 0.0067 21.4 8.9 37 353-396 34-70 (116)
329 PF05297 Herpes_LMP1: Herpesvi 26.3 22 0.00048 32.2 0.0 22 376-397 121-142 (381)
330 PF10183 ESSS: ESSS subunit of 26.1 74 0.0016 24.4 2.8 30 230-259 56-85 (105)
331 PF07456 Hpre_diP_synt_I: Hept 25.3 1.7E+02 0.0036 24.2 4.8 51 121-178 67-117 (148)
332 PRK02237 hypothetical protein; 24.8 1.8E+02 0.0039 22.4 4.5 51 115-166 56-106 (109)
333 TIGR02185 Trep_Strep conserved 24.0 4.2E+02 0.009 22.9 7.4 56 122-181 37-92 (189)
334 PRK10263 DNA translocase FtsK; 23.8 4.6E+02 0.01 30.4 9.2 6 57-62 40-45 (1355)
335 PF01102 Glycophorin_A: Glycop 23.5 65 0.0014 25.5 2.1 12 498-509 84-95 (122)
336 COG3086 RseC Positive regulato 23.3 4.2E+02 0.009 21.7 6.5 65 93-163 55-120 (150)
337 PF12805 FUSC-like: FUSC-like 23.2 3.6E+02 0.0078 25.1 7.5 37 150-186 3-40 (284)
338 PF02694 UPF0060: Uncharacteri 23.2 1.7E+02 0.0036 22.5 4.1 51 115-166 54-104 (107)
339 PF07760 DUF1616: Protein of u 22.5 2.7E+02 0.0058 26.0 6.4 58 172-230 22-79 (287)
340 PF06123 CreD: Inner membrane 22.0 8.1E+02 0.017 24.5 11.8 21 375-395 306-326 (430)
341 PF11023 DUF2614: Protein of u 22.0 3.8E+02 0.0083 20.8 6.2 17 385-401 6-22 (114)
342 TIGR00836 amt ammonium transpo 21.6 8E+02 0.017 24.3 12.7 31 444-474 301-331 (403)
343 PF13000 Acatn: Acetyl-coenzym 20.4 9.5E+02 0.021 24.7 11.9 49 171-219 407-455 (544)
344 PF08611 DUF1774: Fungal prote 20.3 3.8E+02 0.0082 20.2 5.3 18 481-498 52-69 (97)
No 1
>TIGR00898 2A0119 cation transport protein.
Probab=100.00 E-value=2.2e-45 Score=375.08 Aligned_cols=450 Identities=29% Similarity=0.509 Sum_probs=365.0
Q ss_pred HHHHHHHHHHHHHHHHHHhhhcccCccccccCC--CCC--------------CCCCCCCCCC------------------
Q 041759 41 QAILVSLASLFDSQQSFISVYTEAEPTWHCLNN--TTC--------------SSASNICMFP------------------ 86 (525)
Q Consensus 41 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~c~~~--~~~--------------~~~~~~c~~~------------------ 86 (525)
.++++++..+..+++.....+....|+|+|+.+ ++. ..+.+.|.+.
T Consensus 10 ~~~~~~~~~~~~~~~~~~~~f~~~~p~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 89 (505)
T TIGR00898 10 TFLLLALPIALLAFHFVLIVFLGATPEHHCRLPDAANLSSRCELNLTLPRLPDGRPESCLRFMVDQWANPSLLGCEPLKL 89 (505)
T ss_pred HHHHHHHHHHHHHHHHHHHHHcCCCCCcccCCCCcccCChHhHhceeccCCCCCCCCCCccccccchhhhcccccccchh
Confidence 566778889999999999999999999999721 110 0112344322
Q ss_pred -----------CCCceecCCCCccccceeeccccccchhhhhhhHHHHHHHHHHHhHHhhHhcccccCCchHHHHHHHHH
Q 041759 87 -----------KSSWAWDGNPTTTALTIISEWGLECSSAFIKGLPAASHFTGCLLGIVFLATLADSSLGRKNLLFLSCLT 155 (525)
Q Consensus 87 -----------~~~~~~~~~p~~~~~~i~~~~~~~~~s~~~~g~~~s~~~lg~~~~~~~~G~l~dr~~Grk~~~~~~~~~ 155 (525)
..+|.|+.++. .|.+.+|||+.|+++.+.+++.+++.+|..+++++.|+++|| +|||++++++.++
T Consensus 90 ~~~~~~~~~~~~~~~~~~~~~~--~~~i~~e~~l~c~~~~~~~~~~s~~~~g~~~g~~~~g~l~Dr-~Grr~~~~~~~~~ 166 (505)
T TIGR00898 90 SDLGLAATEPCLDGWEYSYDTF--SSTIVTEWDLVCEDAWKVDLTQSCFFVGVLLGSFVFGYLSDR-FGRKKVLLLSTLV 166 (505)
T ss_pred cccCCCCCCCCCCCcEecCCcc--cccEEEEecceechHHHHHHHHHHHHHHHHHHHHhHHHhhhh-ccchHHHHHHHHH
Confidence 12478887666 899999999988879999999999999999999999999999 9999999999999
Q ss_pred HHHHHHHHHhhhhHHHHHHHHHHHhhcccchhhhhheeeEeeecCcchhhHHhHHHHHHHHHHHHHHHHHHhccCCchHH
Q 041759 156 MSVATSLTIFSNNLWIYSLLRFFSGISRATIGTCTIVLLTEKVGTEWRGLVGILDSFFFTIGTLTLPAIAYTNRSSSWTI 235 (525)
Q Consensus 156 ~~i~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~l~~~l~~~~~~~~wr~ 235 (525)
.+++.++.++++|++.++++|++.|++.+...+...+++.|++|+++|+++.++...+..+|.++++.+++.+. +||+
T Consensus 167 ~~i~~~~~~~~~~~~~~~~~r~l~G~~~~~~~~~~~~~~~e~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~~~--~wr~ 244 (505)
T TIGR00898 167 TAVSGVLTAFSPNYTVFLVFRLLVGMGIGGIWVQAVVLNTEFLPKKQRAIVGTLIQVFFSLGLVLLPLVAYFIP--DWRW 244 (505)
T ss_pred HHHHHHHHHHcccHHHHHHHHHHHHhhccchHHHHHHHhheecChhhhHHHHHHHHHHHHHHHHHHHHHHHHhh--HHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999988776 5999
Q ss_pred HHHHHHHHHHHHHhHhheeecCCchHhhhcCCHHHHHHHHHhhCCCcCCccchhhhhhhccCCCCcccccccccchhhhh
Q 041759 236 IYLWTSIPTLVYSGLLYIFVSESPRWLFMQGRQEEAVEVIKSLSPIKDSNQLSLSLVSAVSFGHEPAASSKESSFLSSIR 315 (525)
Q Consensus 236 ~f~~~~~~~~~~~~~~~~~lpesp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 315 (525)
.|++.+++.++.. +..+++||+|+|+..+++.+++.+.+++..+ .++...+.+..+...+.+..++++ ..+++
T Consensus 245 ~~~~~~i~~~~~~-~~~~~~~esp~~l~~~~~~~~a~~~l~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~ 317 (505)
T TIGR00898 245 LQLAVSLPTFLFF-LLSWFVPESPRWLISQGRIEEALKILQRIAK-INGKKLPAEVLSLSLEKDLSSSKK-----QYSFL 317 (505)
T ss_pred HHHHHHHHHHHHH-HHHHhcCCChHHHHHCCCHHHHHHHHHHHHH-HcCCCCCHHHHhhhhhhhhhhccC-----CCcHH
Confidence 9999999888777 5557899999999999999888887777644 333322222111111110000011 13678
Q ss_pred hhhcchhHHHHHHHHHHHHHHHHHHHhhhhhcccccCChhHHHHHHHHHhcccccccCchhHHHHHHHHHhhcChhHHHH
Q 041759 316 ELFVRRWALERTLALMVPGFGIGVVYYGMTLGIENLGFDIYLGVVFNALLEIPNLASTIPSFFLTFFLIQKWNRKSSLLV 395 (525)
Q Consensus 316 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~d~~g~~~~~~~ 395 (525)
+++++|.++...+...+.++.....++.++.+.+..+.+......+.++..+ ++.++.+++.||+|||+.+.+
T Consensus 318 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i-------~~~~~~~~l~dr~grr~~~~~ 390 (505)
T TIGR00898 318 DLFRTPNLRKTTLCLMMLWFTTAFSYYGLVLDLGNLGGNIYLDLFISGLVEL-------PAKLITLLLIDRLGRRYTMAA 390 (505)
T ss_pred HHhCChHHHHHHHHHHHHHHHHHHHHHHHhccccccCCChHHHHHHHHHHHH-------HHHHHHHHHHHHhCCHHHHHH
Confidence 8999999888888887888888888888888888888887777666666666 899999999999999999999
Q ss_pred HHHHHHHHHHHHHHhccccccchhHHHHHHHHHHHHHHHHHHHHHhhhccccCcchhhhhhHHHHHHHHHHHHHHHHHHh
Q 041759 396 LFIISGICSIMAVVANDISNAGKRMRIGLELASLFSAYIAYTVIFIYAIELFPTCVRNSATSIMRLAIIFAAIFSSVLVA 475 (525)
Q Consensus 396 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~r~~~~~~~~~~~~~g~~~~p~i~~ 475 (525)
+.++.+++++++.+.+.. ......+..++.+++.+..++..+.+..|.+|++.|++++|+.+....+|++++|++.+
T Consensus 391 ~~~~~~~~~l~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~g~~~~~~~ig~~i~p~i~~ 467 (505)
T TIGR00898 391 SLLLAGVALLLLLFVPVD---LYFLRTALAVLGKFGITSAFQMVYLYTAELYPTVVRNLGVGVCSTMARVGSIISPFLVY 467 (505)
T ss_pred HHHHHHHHHHHHHHcCCC---chHHHHHHHHHHHHHHHHHHHHHHHHhcccccHHHHhhhHhHHHHHHHHHHHHHhHHHH
Confidence 998888888777665443 22344555666667777788889999999999999999999999999999999999998
Q ss_pred hccCchhHHHHHHHHHHHHHHHHHHhccCCCCCCccc
Q 041759 476 AGSNNEFVSYGVFGLVIICCGFFVICLPETRGSSLCD 512 (525)
Q Consensus 476 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 512 (525)
....+...++.+++++.+++.++.+++||++++++++
T Consensus 468 ~~~~~~~~~~~~~~~~~~~~~~~~~~lpet~~~~l~~ 504 (505)
T TIGR00898 468 LGEKWLFLPLVLFGGLALLAGILTLFLPETKGVPLPE 504 (505)
T ss_pred HHHHHHhhHHHHHHHHHHHHHHHHHcCcCCCCCCCCC
Confidence 5545567788888888888877788889999887654
No 2
>TIGR01299 synapt_SV2 synaptic vesicle protein SV2. This model describes a tightly conserved subfamily of the larger family of sugar (and other) transporters described by pfam model pfam00083. Members of this subfamily include closely related forms SV2A and SV2B of synaptic vesicle protein from vertebrates and a more distantly related homolog (below trusted cutoff) from Drosophila melanogaster. Members are predicted to have two sets of six transmembrane helices.
Probab=100.00 E-value=1.5e-42 Score=356.56 Aligned_cols=417 Identities=20% Similarity=0.297 Sum_probs=322.8
Q ss_pred HHHHHHHHHHHHHHHHHHhhhcccCccccccCCCCCCCCCCCCCCCCCCceecCCCCccccceeeccccccchhhhhhhH
Q 041759 41 QAILVSLASLFDSQQSFISVYTEAEPTWHCLNNTTCSSASNICMFPKSSWAWDGNPTTTALTIISEWGLECSSAFIKGLP 120 (525)
Q Consensus 41 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~c~~~~~~~~~~~~p~~~~~~i~~~~~~~~~s~~~~g~~ 120 (525)
++++++++.+.+++|...+++. +|.+.+++++ +..+.+++
T Consensus 168 l~~i~~l~~~~~g~d~~~is~i-------------------------------------lp~i~~~~gl---s~~~~g~l 207 (742)
T TIGR01299 168 LFFVLGLALMADGVEVFVVGFV-------------------------------------LPSAEKDLCI---PDSGKGML 207 (742)
T ss_pred HHHHHHHHHHHHHHHHHHHHHH-------------------------------------HHHHHHHhCC---CHHHHHHH
Confidence 5677788888899999999999 9999999999 99999999
Q ss_pred HHHHHHHHHHhHHhhHhcccccCCchHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHhhcccchhhhhheeeEeeecC
Q 041759 121 AASHFTGCLLGIVFLATLADSSLGRKNLLFLSCLTMSVATSLTIFSNNLWIYSLLRFFSGISRATIGTCTIVLLTEKVGT 200 (525)
Q Consensus 121 ~s~~~lg~~~~~~~~G~l~dr~~Grk~~~~~~~~~~~i~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~ 200 (525)
.+++.+|.+++++++|+++|| +|||+++++++++.++++++++++++++.++++|++.|++.|+..+...+++.|++|+
T Consensus 208 ~s~~~lG~iiG~li~G~LsDR-~GRR~~lii~lil~~i~~ll~afa~s~~~llv~R~l~G~g~g~~~p~~~~~isE~~p~ 286 (742)
T TIGR01299 208 GLIVYLGMMVGAFFWGGLADK-LGRKQCLLICLSVNGFFAFFSSFVQGYGFFLFCRLLSGFGIGGAIPIVFSYFAEFLAQ 286 (742)
T ss_pred HHHHHHHHHHHHHHHHHHHHH-hCcHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCH
Confidence 999999999999999999999 9999999999999999999999999999999999999999999999999999999999
Q ss_pred cchhhHHhHHHHHHHHHHHHHHHHHHhc-c-------------CCchHHHHHHHHHHHHHHHhHhheeecCCchHhhhcC
Q 041759 201 EWRGLVGILDSFFFTIGTLTLPAIAYTN-R-------------SSSWTIIYLWTSIPTLVYSGLLYIFVSESPRWLFMQG 266 (525)
Q Consensus 201 ~~r~~~~~~~~~~~~~G~~l~~~l~~~~-~-------------~~~wr~~f~~~~~~~~~~~~~~~~~lpesp~~~~~~~ 266 (525)
++|++.++++.+++.+|.++++.+++.+ . ..+||+++++.+++.++.+ +..+++||||+|+..++
T Consensus 287 ~~Rg~~~g~~~~~~~iG~ila~~la~~il~~~G~~~~~g~~~~~~gWR~l~~i~~lp~ll~l-l~~~~lPESPrwL~~~g 365 (742)
T TIGR01299 287 EKRGEHLSWLCMFWMIGGIYAAAMAWAIIPHYGWSFQMGSAYQFHSWRVFVIVCAFPCVFAI-GALTFMPESPRFFLENG 365 (742)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccchhccccccccccHHHHHHHHHHHHHHHH-HHHHHcCCCHHHHHHCC
Confidence 9999999999999999999998774332 1 2479999999888877766 77788999999999999
Q ss_pred CHHHHHHHHHhhCCCcCCccc--hhhh-----hhhc-cCCC--Cccccc---------cc----ccchhhhhhhhcchhH
Q 041759 267 RQEEAVEVIKSLSPIKDSNQL--SLSL-----VSAV-SFGH--EPAASS---------KE----SSFLSSIRELFVRRWA 323 (525)
Q Consensus 267 ~~~~~~~~~~~~~~~~~~~~~--~~~~-----~~~~-~~~~--~~~~~~---------~~----~~~~~~~~~l~~~~~~ 323 (525)
+.+++.+.++++.+ .|.... +... .+.. .+.+ +.++.. +. ...+..++++++.+ +
T Consensus 366 r~~eA~~iL~~i~~-~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lf~~~-~ 443 (742)
T TIGR01299 366 KHDEAWMILKLIHD-TNMRAKGHPEKVFSVNHIKTIHQEDELIEIESDTGTWYQRCFVRALSEGGGIWGNFLRCFNPE-V 443 (742)
T ss_pred CHHHHHHHHHHHhc-CCCCCcCchhHHHHHHHHHHhhhhhhhhcccccccchhhcchhhhhhhhhhHHHHHHHHcCcc-H
Confidence 99999999998865 443211 1110 0000 0000 000000 00 00011356666654 4
Q ss_pred HHHHHHHHHHHHHHHHHHhhhhhccccc----------------------------------------------CC----
Q 041759 324 LERTLALMVPGFGIGVVYYGMTLGIENL----------------------------------------------GF---- 353 (525)
Q Consensus 324 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~----------------------------------------------~~---- 353 (525)
++.++..++.+++..+.+|++..+++++ |+
T Consensus 444 ~~~tl~l~~~wf~~~~~yygl~~w~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 523 (742)
T TIGR01299 444 REITIKLMGVWFTLSFGYYGLSVWFPDMIKHLQADDYAALTKNFPGDKVAHFSFNFTLENQIHRGGEYDNDKFIGLKFKS 523 (742)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhccccccchhccccccchhhhhccccccccchhhcccccc
Confidence 7778888888888777777765543311 00
Q ss_pred -h--------------------------------------------------------------------hHHHHHHHHH
Q 041759 354 -D--------------------------------------------------------------------IYLGVVFNAL 364 (525)
Q Consensus 354 -~--------------------------------------------------------------------~~~~~~~~~~ 364 (525)
. .........+
T Consensus 524 ~~~~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~l 603 (742)
T TIGR01299 524 VSFEDSLFEECTFDDVTSSNTFFKNCTFIDTLFENTDFEEYKFIDSEFQNCSFLHNKEGCPIDFDGDDEGAYMIYFVNFL 603 (742)
T ss_pred cccccccccccceeeccccchhhhccchhhhhccccchhhhhhhhhhhhhccccccCCccCccCCccchhHHHHHHHHHH
Confidence 0 0001111222
Q ss_pred hcccccccCchhHHHHHHHHHhhcChhHHHHHHHHHHHHHHHHHHhccccccchhHHHHHHHHHHHHHHHHHHHHHhhhc
Q 041759 365 LEIPNLASTIPSFFLTFFLIQKWNRKSSLLVLFIISGICSIMAVVANDISNAGKRMRIGLELASLFSAYIAYTVIFIYAI 444 (525)
Q Consensus 365 ~~~~~~~~~~~~~~~~~~l~d~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 444 (525)
..+ +.+++.+++++++||+|||+++.++.++.+++++++.+.... ...+++.++.+++.+..++....+++
T Consensus 604 ~~l----~~i~G~il~g~L~Dr~GRr~~l~~~~~lsai~~ll~~~~~s~-----~~ll~~~~l~g~~~~~~~~~~~a~~a 674 (742)
T TIGR01299 604 GTL----AVLPGNIVSALLMDKIGRLRMLAGSMVLSCISCFFLSFGNSE-----SAMIALLCLFGGLSIAAWNALDVLTV 674 (742)
T ss_pred HHH----HHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHccH-----HHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 223 666999999999999999999999999999988887766543 23444555667777778899999999
Q ss_pred cccCcchhhhhhHHHHHHHHHHHHHHHHHHhh-ccCchhHHHHHHHHHHHHHHHHHHhccCCCCCCc
Q 041759 445 ELFPTCVRNSATSIMRLAIIFAAIFSSVLVAA-GSNNEFVSYGVFGLVIICCGFFVICLPETRGSSL 510 (525)
Q Consensus 445 ~~~p~~~r~~~~~~~~~~~~~g~~~~p~i~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 510 (525)
|.+|++.|++++|+.+....+|++++|++.+. ...+...++++++++.++++++.+++||++++.+
T Consensus 675 El~Pt~~Rgta~Gi~~~~~rlGaiigp~i~g~L~~~~~~~pf~i~a~~lll~~ll~~~LPET~~~~l 741 (742)
T TIGR01299 675 ELYPSDKRATAFGFLNALCKAAAVLGILIFGSFVGITKAAPILFASAALACGGLLALKLPDTRGQVL 741 (742)
T ss_pred HHcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHhCCCCccccc
Confidence 99999999999999999999999999999873 3334566778888887877777778899887653
No 3
>TIGR00887 2A0109 phosphate:H+ symporter. This model represents the phosphate uptake symporter subfamily of the major facilitator superfamily (pfam00083).
Probab=100.00 E-value=1.8e-39 Score=329.95 Aligned_cols=417 Identities=19% Similarity=0.234 Sum_probs=291.3
Q ss_pred HHHHHHHHHHHHHHHHHHhhhcccCccccccCCCCCCCCCCCCCCCCCCceecCCCCccccceeec-----cccccchhh
Q 041759 41 QAILVSLASLFDSQQSFISVYTEAEPTWHCLNNTTCSSASNICMFPKSSWAWDGNPTTTALTIISE-----WGLECSSAF 115 (525)
Q Consensus 41 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~c~~~~~~~~~~~~p~~~~~~i~~~-----~~~~~~s~~ 115 (525)
.+.+++++.+++++|...++.. .|.+.++ .+. +..
T Consensus 17 ~~~~~~~~~~~~g~d~~~~~~~-------------------------------------~~~~~~~~~~~~~~~---~~~ 56 (502)
T TIGR00887 17 AIVIAGVGFFTDSYDLFCISLV-------------------------------------TKMLGYVYYHGKGPL---PSS 56 (502)
T ss_pred HHHHHHHHHHHHHHHHHHHHHH-------------------------------------HHHHHHHhccCcccc---hHH
Confidence 6778888999999999999888 5555443 234 667
Q ss_pred hhhhHHHHHHHHHHHhHHhhHhcccccCCchHHHHHHHHHHHHHHHHHHhhhh------HHHHHHHHHHHhhcccchhhh
Q 041759 116 IKGLPAASHFTGCLLGIVFLATLADSSLGRKNLLFLSCLTMSVATSLTIFSNN------LWIYSLLRFFSGISRATIGTC 189 (525)
Q Consensus 116 ~~g~~~s~~~lg~~~~~~~~G~l~dr~~Grk~~~~~~~~~~~i~~~~~~~~~~------~~~l~~~r~l~G~~~~~~~~~ 189 (525)
+.+++.+.+.+++.++++++|+++|| +|||+++.++.++++++.++++++++ ++.++++|+++|++.|...+.
T Consensus 57 ~~~~~~~~~~ig~~ig~~~~g~l~d~-~Grr~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~r~l~G~~~g~~~~~ 135 (502)
T TIGR00887 57 VSAAVNGSASIGTLAGQLFFGWLADK-LGRKRVYGMELIIMIIATVASGLSPGSSPKSVMATLCFWRFWLGVGIGGDYPL 135 (502)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHh-hccHHHHHHHHHHHHHHHHHHHHccCcccchHHHHHHHHHHHHHHHHhhhhHH
Confidence 78999999999999999999999999 99999999999999999999988765 789999999999999999999
Q ss_pred hheeeEeeecCcchhhHHhHHHHHHHHHHHHHHHHHHhc------------------------cCCchHHHHHHHHHHHH
Q 041759 190 TIVLLTEKVGTEWRGLVGILDSFFFTIGTLTLPAIAYTN------------------------RSSSWTIIYLWTSIPTL 245 (525)
Q Consensus 190 ~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~l~~~l~~~~------------------------~~~~wr~~f~~~~~~~~ 245 (525)
...+++|++|+++|++++++.+.+..+|.++++.++..+ .+++||++|.+.+++.+
T Consensus 136 ~~~~~~e~~p~~~Rg~~~~~~~~~~~~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~WR~~~~~~~ip~~ 215 (502)
T TIGR00887 136 SAIITSEFATKKWRGAMMAAVFAMQGFGILAGAIVALIVLAGFKHSLEAAADEASCTGSCVPAVDYMWRILIGFGAVPAL 215 (502)
T ss_pred HHHHHHHhcChhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccccccccccccccccchhcccHHHHHHHHHHHHH
Confidence 999999999999999999999999999999988775422 12479999999888888
Q ss_pred HHHhHhheeecCCchHhhhcCCHH-HHHHHHHhhCCCcCCccchhhhhhhccCCCCcccccccccchhhhhhhhcch---
Q 041759 246 VYSGLLYIFVSESPRWLFMQGRQE-EAVEVIKSLSPIKDSNQLSLSLVSAVSFGHEPAASSKESSFLSSIRELFVRR--- 321 (525)
Q Consensus 246 ~~~~~~~~~lpesp~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~--- 321 (525)
+.. +..+++||||+|+..+++.+ ++++.+.+..+ .+.++..++..+.++ .++.. ..+++++++++
T Consensus 216 i~~-~~~~~lpESpr~l~~~~~~~~~a~~~~~~~~~-~~~~~~~~~~~~~~~----~~~~~-----~~~~~~l~~~~~~~ 284 (502)
T TIGR00887 216 LAL-YFRLTIPETPRYTADVAKDVEQAASDMSAVLQ-VKIEAEPDEVEKAST----AVEVP-----KASWSDFFTHFFKW 284 (502)
T ss_pred HHH-HHHHhCCCCHHHHHHhCcchHHHHHHHHHHhc-cccccCcccccchhc----cccch-----hhhHHHHHHHHhhh
Confidence 776 66788999999998877764 45555555422 111111111000000 00001 12566666532
Q ss_pred hHHHHHHHHHHHHHHHHHHHhh----hhhcccccCChhHHH-----------HH-HHHHhcccccccCchhHHHHHHHHH
Q 041759 322 WALERTLALMVPGFGIGVVYYG----MTLGIENLGFDIYLG-----------VV-FNALLEIPNLASTIPSFFLTFFLIQ 385 (525)
Q Consensus 322 ~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~-----------~~-~~~~~~~~~~~~~~~~~~~~~~l~d 385 (525)
+.++..+.....++...+.+|. .|.++++.|.+.... .. ...+..+ +.+++.++.++++|
T Consensus 285 ~~~~~~~~~~~~~~~~~~~~y~~~~~~p~i~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~i~g~~~~~~l~d 360 (502)
T TIGR00887 285 RHGKHLLGTAGSWFLLDIAFYGVNLNQKVILSAIGYSPPAATNNAYEELYKTAVGNLIIALA----GTVPGYWVTVFLVD 360 (502)
T ss_pred HHHHHHHHHHHHHHHHHHHHHccccccHHHHHHHcCCCCccchhHHHHHHHHHHHHHHHHHH----HHHHHHHHHHHHhh
Confidence 2223333333333444334444 344455556543210 00 1111112 45578899999999
Q ss_pred hhcChhHHHHHHHHHHHHHHHHHHhccccccchhHHHHHHHHHHHHHHHHHHHHHhhhccccCcchhhhhhHHHHHHHHH
Q 041759 386 KWNRKSSLLVLFIISGICSIMAVVANDISNAGKRMRIGLELASLFSAYIAYTVIFIYAIELFPTCVRNSATSIMRLAIIF 465 (525)
Q Consensus 386 ~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~r~~~~~~~~~~~~~ 465 (525)
|+|||++++++..+.+++++++....... ..........+...+......+..+.+..|.+|++.|+++.|+.+..+.+
T Consensus 361 r~gRR~~l~~~~~~~~~~~~~l~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~p~~~R~~~~g~~~~~~~~ 439 (502)
T TIGR00887 361 IIGRKPIQLMGFFILTVLFFVLGFAYNHL-STHGFLAIYVLAQFFANFGPNATTFIVPGEVFPTRYRSTAHGISAASGKA 439 (502)
T ss_pred hhcchhHHHHHHHHHHHHHHHHHHHHHhc-chhHHHHHHHHHHHHHhcCCCchhhhhhhccCchhHHHHHHHHHHHHhhh
Confidence 99999999888887777766665432210 00111111111111222234467788899999999999999999999999
Q ss_pred HHHHHHHHHhhccC------------chhHHHHHHHHHHHHHHHHHHhccCCCCCCccchH
Q 041759 466 AAIFSSVLVAAGSN------------NEFVSYGVFGLVIICCGFFVICLPETRGSSLCDTI 514 (525)
Q Consensus 466 g~~~~p~i~~~~~~------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 514 (525)
+++++|.+.+.... +....+.+++++++++.++.+++||+++++++|.+
T Consensus 440 ~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~i~~~~lpEt~~~~leei~ 500 (502)
T TIGR00887 440 GAIIGQFGFLYLAQHGDPTKGYPTGIWMGHVLEIFALFMFLGILFTLLIPETKGKSLEELS 500 (502)
T ss_pred HHHHHHHHhhhhhccccccccccccccchHHHHHHHHHHHHHHHHheEeccCCCCCHHhhh
Confidence 99999999874211 22456777777777776666777999998876543
No 4
>KOG0253 consensus Synaptic vesicle transporter SV2 (major facilitator superfamily) [General function prediction only]
Probab=100.00 E-value=5.6e-39 Score=287.46 Aligned_cols=412 Identities=22% Similarity=0.326 Sum_probs=339.9
Q ss_pred HHHHHHHHHHHHHHHHHHhhhcccCccccccCCCCCCCCCCCCCCCCCCceecCCCCccccceeeccccccchhhhhhhH
Q 041759 41 QAILVSLASLFDSQQSFISVYTEAEPTWHCLNNTTCSSASNICMFPKSSWAWDGNPTTTALTIISEWGLECSSAFIKGLP 120 (525)
Q Consensus 41 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~c~~~~~~~~~~~~p~~~~~~i~~~~~~~~~s~~~~g~~ 120 (525)
.......+++-+.+.....+.. .|.+.+.+|. +..+..++
T Consensus 79 l~~~ag~gwmad~m~~m~~s~i-------------------------------------~~~l~~~w~~---s~~q~~ll 118 (528)
T KOG0253|consen 79 LFFVAGMGWMADAMEMMLLSLI-------------------------------------LPALDEVWGP---SEGQAPLL 118 (528)
T ss_pred HHHHhhhHHHHHHHHHHHHHHH-------------------------------------HHHHHhhhch---hhhhhhHH
Confidence 6778888999999999999999 8999999998 99999999
Q ss_pred HHHHHHHHHHhHHhhHhcccccCCchHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHhhcccchhhhhheeeEeeecC
Q 041759 121 AASHFTGCLLGIVFLATLADSSLGRKNLLFLSCLTMSVATSLTIFSNNLWIYSLLRFFSGISRATIGTCTIVLLTEKVGT 200 (525)
Q Consensus 121 ~s~~~lg~~~~~~~~G~l~dr~~Grk~~~~~~~~~~~i~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~ 200 (525)
......|..+++..+|..+|+ +|||+.+.+..+..++..++.++++|+.++++.|.+.|+|.|+ .|...++-.|..|.
T Consensus 119 t~~v~~gmllga~~w~l~~d~-~grr~~f~~T~l~t~v~~~is~~spnf~~L~~f~~l~~~g~gg-~pv~~~~yle~lp~ 196 (528)
T KOG0253|consen 119 TLSVFLGMLVGAMVWGLSADT-IGRRKGFNLTFLVTGVFGVISGASPNFASLCVFRALWGFGVGG-LPVDSAIYLEFLPS 196 (528)
T ss_pred HHHHHhhhhhhhhhhheehhh-hhcchhhhhhHHHHHHHHHhhcCCCCeehhhHHHHHHhccCCC-ccHhHHHHHHhccC
Confidence 999999999999999999999 9999999999999999999999999999999999999999998 88888888999999
Q ss_pred cchhhHHhHHHHHHHHHHHHHHHHHHh-ccCCchHHHHHHHHHHHHHHHhHhheeecCCchHhhhcCCHHHHHHHHHhhC
Q 041759 201 EWRGLVGILDSFFFTIGTLTLPAIAYT-NRSSSWTIIYLWTSIPTLVYSGLLYIFVSESPRWLFMQGRQEEAVEVIKSLS 279 (525)
Q Consensus 201 ~~r~~~~~~~~~~~~~G~~l~~~l~~~-~~~~~wr~~f~~~~~~~~~~~~~~~~~lpesp~~~~~~~~~~~~~~~~~~~~ 279 (525)
.+|...+-.. ..+.+|.++...++++ +..+||||.....+.+..+.+ ...+++|||||++..+++.+++.+.+++++
T Consensus 197 ~~r~~~~V~~-~~waig~v~ea~law~vm~~~gwr~~l~~~~~pl~~~a-~f~~w~~ESpRf~~~~G~~~kAletL~kiA 274 (528)
T KOG0253|consen 197 SHRWLLTVMS-FFWAIGQVFEALLAWGVMSNFGWRYLLFTSSTPLMFAA-RFLVWVYESPRFYLAKGDDYKALETLHKIA 274 (528)
T ss_pred cCCCcchhHH-HHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHhHHHHHH-HHHhhcccCcchhhhcCChHHHHHHHHHHH
Confidence 9998887777 9999999999998765 467899999999888877777 888899999999999999999999999998
Q ss_pred CCcCCccchhhhhhhcc------CCCC--cccccccccchhhhhhhhcchhHHHHHHHHHHHHHHHHHHHhhhhhccccc
Q 041759 280 PIKDSNQLSLSLVSAVS------FGHE--PAASSKESSFLSSIRELFVRRWALERTLALMVPGFGIGVVYYGMTLGIENL 351 (525)
Q Consensus 280 ~~~~~~~~~~~~~~~~~------~~~~--~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 351 (525)
+ .|+++.+....+... +..+ +.+.+..+....+..+++ .|.+++..+.....+++..+.+|+..++..++
T Consensus 275 r-mNg~qlplgvl~~s~~~~~e~e~~~~~~~~~~a~ke~rg~~~nLl-sp~lrkttlllw~iwfgnafsyyg~VLlttel 352 (528)
T KOG0253|consen 275 R-MNGKQLPLGVLESSAIDRQEQEESDLDDSKSSAAKEVRGGTTNLL-SPKLRKTTLLLWRIWFGNAFSYYGSVLLTTEL 352 (528)
T ss_pred H-hcCCCCCcceeeeehhhhhhhhhhchhhhhhccccccccchHhhc-ChHHHHHHHHHHHHHHhhHHHHHHHHHHHHHH
Confidence 8 887765533222211 1100 011111112223455555 46678888888899998888888764432111
Q ss_pred ---------------------------CChhHHHHHHHHHhcccccccCchhHHHHHHHHHhhcChhHHHHHHHHHHHHH
Q 041759 352 ---------------------------GFDIYLGVVFNALLEIPNLASTIPSFFLTFFLIQKWNRKSSLLVLFIISGICS 404 (525)
Q Consensus 352 ---------------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~d~~g~~~~~~~~~~~~~~~~ 404 (525)
.-..+...++.++..+ +|.++.++++||+|||+.+..++++.+++.
T Consensus 353 fqsgd~c~~~~r~~p~e~e~~~~c~~s~~~dYrdllitslaef-------PGlLIt~~iverlGRKkTMal~l~~f~ifl 425 (528)
T KOG0253|consen 353 FQSGDACPLYNRFLPTELETRANCPLSVAKDYRDLLITSLAEF-------PGLLITGVIVERLGRKKTMALSLILFGIFL 425 (528)
T ss_pred HhccCccccchhcchhHHHhhhcCCccchhHHHHHHHHHHhhC-------CchhHHHHHHHHhcchhHHHHHHHHHHHHH
Confidence 0112345566777777 999999999999999999999999999998
Q ss_pred HHHHHhccccccchhHHHHHHHHHHHHHHHHHHHHHhhhccccCcchhhhhhHHHHHHHHHHHHHHHHHHhhccCchhHH
Q 041759 405 IMAVVANDISNAGKRMRIGLELASLFSAYIAYTVIFIYAIELFPTCVRNSATSIMRLAIIFAAIFSSVLVAAGSNNEFVS 484 (525)
Q Consensus 405 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~r~~~~~~~~~~~~~g~~~~p~i~~~~~~~~~~~ 484 (525)
+++...... ....+..+...++..+.+...+.|.+|++|+..|+++.|.+.....+|+++.|++.-........+
T Consensus 426 fll~~c~~r-----n~~tvllf~arafisg~fqvaYvYtPEVyPTavRatgvGtcSsmaRIggI~~p~iA~~~e~s~sl~ 500 (528)
T KOG0253|consen 426 FLLTTCKTR-----NAYTVLLFTARAFISGAFQVAYVYTPEVYPTAVRATGVGTCSSMARIGGIFSPVIAMRAELSTSLP 500 (528)
T ss_pred HHHHHhcCc-----chhHHHHHHHHHHHhchheEEEEecCcccchhhhhcchhhhhhHHhhhhhhhhHHHHHhccceeeh
Confidence 888776544 356677788889999999999999999999999999999999999999999999995444556788
Q ss_pred HHHHHHHHHHHHHHHHhcc-CCCCCCc
Q 041759 485 YGVFGLVIICCGFFVICLP-ETRGSSL 510 (525)
Q Consensus 485 ~~~~~~~~~~~~~~~~~~~-~~~~~~~ 510 (525)
..+++.+++++.+...++| |+|+|.+
T Consensus 501 i~vy~~~~ilagIavcffPiEtkGR~l 527 (528)
T KOG0253|consen 501 IFVYGALFILAGIAVCFFPIETKGRSL 527 (528)
T ss_pred HHHHHHHHHHHHHHheeeeeccCCCCC
Confidence 8888888888888777775 8888764
No 5
>KOG0569 consensus Permease of the major facilitator superfamily [Carbohydrate transport and metabolism]
Probab=100.00 E-value=2.5e-38 Score=305.49 Aligned_cols=394 Identities=22% Similarity=0.279 Sum_probs=301.3
Q ss_pred hhhhhhHHHHHHHHHHHhHHhhHhcccccCCchHHHHHHHHHHHHHHHHHHhh---hhHHHHHHHHHHHhhcccchhhhh
Q 041759 114 AFIKGLPAASHFTGCLLGIVFLATLADSSLGRKNLLFLSCLTMSVATSLTIFS---NNLWIYSLLRFFSGISRATIGTCT 190 (525)
Q Consensus 114 ~~~~g~~~s~~~lg~~~~~~~~G~l~dr~~Grk~~~~~~~~~~~i~~~~~~~~---~~~~~l~~~r~l~G~~~~~~~~~~ 190 (525)
+...+.+.+++.+|.++|+++.|+++|| +|||..++++.++..++.++..++ +++++++++|++.|+..|......
T Consensus 59 ~~lwS~~vs~f~iG~~~Gs~~~~~la~~-~GRK~~l~~~~~l~~~~~~~~~~s~~~~~~e~li~GR~i~Gl~~gl~~~~~ 137 (485)
T KOG0569|consen 59 DLLWSLIVSIFFIGGMIGSFSSGLLADR-FGRKNALLLSNLLAVLAALLMGLSKSAPSFEMLILGRLIVGLACGLSTGLV 137 (485)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHh-hcchHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHhHHHHHHH
Confidence 4567889999999999999999999999 999999999998888888777664 789999999999999999999999
Q ss_pred heeeEeeecCcchhhHHhHHHHHHHHHHHHHHHHH--Hhc-cCCchHHHHHHHHHHHHHHHhHhheeecCCchHhhh-cC
Q 041759 191 IVLLTEKVGTEWRGLVGILDSFFFTIGTLTLPAIA--YTN-RSSSWTIIYLWTSIPTLVYSGLLYIFVSESPRWLFM-QG 266 (525)
Q Consensus 191 ~~~i~~~~~~~~r~~~~~~~~~~~~~G~~l~~~l~--~~~-~~~~wr~~f~~~~~~~~~~~~~~~~~lpesp~~~~~-~~ 266 (525)
+.|+.|..|++.||....+.+.+.++|.+++..++ .++ ....|++.+.+..+++++.. +...++||||+|+.. ++
T Consensus 138 pmyl~E~sP~~~RG~~g~~~~~~~~~g~ll~~~~~l~~ilGt~~~W~~l~~~~~i~~~~~l-~~l~~~PESPk~Ll~~k~ 216 (485)
T KOG0569|consen 138 PMYLTEISPKNLRGALGTLLQIGVVIGILLGQVLGLPSLLGTEDLWPYLLAFPLIPALLQL-ALLPFLPESPKYLLIKKG 216 (485)
T ss_pred HHHHhhcChhhhccHHHHHHHHHHHHHHHHHHHHccHHhcCCCcchHHHHHHHHHHHHHHH-HHHhcCCCCcchHHHHcC
Confidence 99999999999999999999999999999998774 344 45579999999999999988 888999999999988 89
Q ss_pred CHHHHHHHHHhhCCCcCCccchhhhhhhccCCCCcccccccccchhhhhhhhcchhHHHHHHHHHHHHHHH-----HHHH
Q 041759 267 RQEEAVEVIKSLSPIKDSNQLSLSLVSAVSFGHEPAASSKESSFLSSIRELFVRRWALERTLALMVPGFGI-----GVVY 341 (525)
Q Consensus 267 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~-----~~~~ 341 (525)
+++++++.++..+. .++.+...+....+.+.++.+++++ .+++++++++..++...+.+...++. +...
T Consensus 217 ~~~~A~~sl~~y~G-~~~~~~~~e~~~~e~~~~~~~~~~~-----~sl~~~~~~~~lR~~~~i~~~v~~~qq~sGi~ai~ 290 (485)
T KOG0569|consen 217 DEEEARKALKFYRG-KEDVEAEIEEMLREIEEEELEKKKQ-----ISLRQLLKNPTLRRPLLIGIVVSFAQQFSGINAIF 290 (485)
T ss_pred CHHHHHHHHHHHhC-CCcchhHHHHHHHHHHHhccccccC-----CcHHHHhcCcchhHHHHHHHHHHHHHHhcCcceeH
Confidence 99999999999844 4332222222111111111111111 58999999999888877666665543 3455
Q ss_pred hhhhhcccccCChhHHHHHHHHHhcccccccCchhHHHHHHHHHhhcChhHHHHHHHHHHHHHHHHHHhccccc-c-chh
Q 041759 342 YGMTLGIENLGFDIYLGVVFNALLEIPNLASTIPSFFLTFFLIQKWNRKSSLLVLFIISGICSIMAVVANDISN-A-GKR 419 (525)
Q Consensus 342 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~d~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~-~-~~~ 419 (525)
++...++++.|++...+.......++ ..++.++++.+++||+|||++++.+..++.+..+++.......+ . +|.
T Consensus 291 ~Yst~i~~~aG~~~~~a~~an~~~g~----v~~~~t~~~~~lid~~gRRpLll~~~~~~~~~~~~~~~~~~l~~~~~~~~ 366 (485)
T KOG0569|consen 291 FYSTSIFKTAGFTPEEAQYANLGIGI----VNLLSTLVSPFLIDRLGRRPLLLISLSLMAVALLLMSIALFLSNSFGSWL 366 (485)
T ss_pred HHHHHHHHHcCCCHHHHHHHHHHHHH----HHHHHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHH
Confidence 56667777888888777766666665 55599999999999999999999999998888777765432210 1 122
Q ss_pred --HHHHHHHHHHHHHHHH-HHHHHhhhccccCcchhhhhhHHHHHHHHHHHHHHHHHHhh--ccCchhHHHHHHHHHHHH
Q 041759 420 --MRIGLELASLFSAYIA-YTVIFIYAIELFPTCVRNSATSIMRLAIIFAAIFSSVLVAA--GSNNEFVSYGVFGLVIIC 494 (525)
Q Consensus 420 --~~~~~~~~~~~~~~~~-~~~~~~~~~~~~p~~~r~~~~~~~~~~~~~g~~~~p~i~~~--~~~~~~~~~~~~~~~~~~ 494 (525)
..+++.++..+..+.+ -|+.+.+.+|++|++.|+.++++....+++..++..+.... ...+. ..|.++.+.+.+
T Consensus 367 ~y~~i~~~~~~~~~f~~G~gpi~~fi~aELf~~~~R~aa~s~~~~~~w~~~fiv~~~fp~l~~~~g~-~~filF~i~~~~ 445 (485)
T KOG0569|consen 367 SYLCIAAIFLFIISFAIGPGPIPWFIGAELFPQSARSAAQSVATAVNWLSNFIVGFAFPPLQNVIGP-YVFILFVIPLAI 445 (485)
T ss_pred HHHHHHHHHHHHHhhhcCCCchhHHHHHHhCCccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcc-hhhHHHHHHHHH
Confidence 2233333333333333 47899999999999999999999999998888876666542 11223 666666665555
Q ss_pred HH-HHHHhccCCCCCCccchHHHhccc
Q 041759 495 CG-FFVICLPETRGSSLCDTIDQREHK 520 (525)
Q Consensus 495 ~~-~~~~~~~~~~~~~~~~~~~~~~~~ 520 (525)
.. .++.++||||+|+..|+.++.+++
T Consensus 446 ~~i~~~~~lPETkgr~~~eI~~~~~~~ 472 (485)
T KOG0569|consen 446 FLIYLYRYLPETKGRTPYEIIEELEKR 472 (485)
T ss_pred HHHHHHHhCcccCCCCHHHHHHHHHhC
Confidence 54 456778999999999988876654
No 6
>KOG0255 consensus Synaptic vesicle transporter SVOP and related transporters (major facilitator superfamily) [General function prediction only]
Probab=100.00 E-value=2.6e-36 Score=308.67 Aligned_cols=460 Identities=28% Similarity=0.496 Sum_probs=357.9
Q ss_pred HHHHHHHHHHHHHHHHHHhhhcccCcccccc---------CCCCCCCCCC-----------------CCCCCCCCceecC
Q 041759 41 QAILVSLASLFDSQQSFISVYTEAEPTWHCL---------NNTTCSSASN-----------------ICMFPKSSWAWDG 94 (525)
Q Consensus 41 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~c~---------~~~~~~~~~~-----------------~c~~~~~~~~~~~ 94 (525)
.....++.......+.....+....|+++|. .+|..+.+.+ .+..-..+|.|+.
T Consensus 20 ~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 99 (521)
T KOG0255|consen 20 LLLLLGLPSIFSALHSFAQIFLAFVPDHHCTEWGCLNDAEDSCLVYWDPTLDPANPLNWPSWKKWLLVIVICLDGWVYDY 99 (521)
T ss_pred HHHHHHHHHhHHHHHHHHHHhhccCCCchhhhhhcccCCcccceecccCccCcCCccccccccccccccccccceeEecC
Confidence 4555666666666677777788788875552 2333110000 1122346788887
Q ss_pred CCCccccceeeccccccchhhhhhhHHHHHHHHHHHhHHhhHhcccccCCchHHHHHHHHHHHHHHHHHHhhhhHHHHHH
Q 041759 95 NPTTTALTIISEWGLECSSAFIKGLPAASHFTGCLLGIVFLATLADSSLGRKNLLFLSCLTMSVATSLTIFSNNLWIYSL 174 (525)
Q Consensus 95 ~p~~~~~~i~~~~~~~~~s~~~~g~~~s~~~lg~~~~~~~~G~l~dr~~Grk~~~~~~~~~~~i~~~~~~~~~~~~~l~~ 174 (525)
+.. .-++..++++.|++.....+..+++++|.++|++++|+++|| +|||+++++++++.+++.++.++++|++.+++
T Consensus 100 ~~~--~~s~~~~~~~~c~~~~~~~~~~s~~~~G~~vG~~i~g~lsD~-~GRk~~~~~~~~~~~i~~~~~a~a~~~~~~~~ 176 (521)
T KOG0255|consen 100 GSS--VYSIVSEWNLVCDSSTLVALGQSLFFLGVLVGSLIFGPLSDR-FGRKPVLLVSLLLFIIFGILTAFAPNYWMFLI 176 (521)
T ss_pred CCC--cccccchhceeeCcHhHHHHHHHHHHHHHHHHHhhheehHhh-cccHHHHHHHHHHHHHHHHHHHHhCcHHHHHH
Confidence 666 556666688888899999999999999999999999999999 99999999999999999999999999999999
Q ss_pred HHHHHhhcccchhhhhheeeEeeecCcchhhHHhHHHHHHHHHHHHHHHHHHhccCCchHHHHHHHHHHHHHHHhHhhee
Q 041759 175 LRFFSGISRATIGTCTIVLLTEKVGTEWRGLVGILDSFFFTIGTLTLPAIAYTNRSSSWTIIYLWTSIPTLVYSGLLYIF 254 (525)
Q Consensus 175 ~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~l~~~l~~~~~~~~wr~~f~~~~~~~~~~~~~~~~~ 254 (525)
.|++.|++.+....+...++.|++++++|+.+.++....+..|.+..+..+++.. +||+.+++..++.++.+ +.+++
T Consensus 177 ~Rfl~G~~~~~~~~~~~~~~~E~~~~~~R~~~~~~~~~~~~~~~~~~~~~a~~~~--~Wr~~~~~~~~~~~~~~-~~~~l 253 (521)
T KOG0255|consen 177 FRFLSGFFGSGPLTVGFGLVAEIVSPKQRGLALTLGGFFFVGGLMLPAGAAYITR--DWRWLFWIISIPSGLFL-LLWFL 253 (521)
T ss_pred HHHHHHhhccchhHHhHhhheeecCcchhhHHHHHHHHHHHHHHHHHHHHHHHHh--hHHHHHHHHHHHHHHHH-HHHHc
Confidence 9999999999999999999999999999999999944455555555555577777 99999999999999887 55777
Q ss_pred ecCCchHhhhcCCHHHHHHHHHhhCCCcCCccc-hhhhhhhccCCCCcccccccccchhhhhhhhcchhHHHHHHHHHHH
Q 041759 255 VSESPRWLFMQGRQEEAVEVIKSLSPIKDSNQL-SLSLVSAVSFGHEPAASSKESSFLSSIRELFVRRWALERTLALMVP 333 (525)
Q Consensus 255 lpesp~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~ 333 (525)
.||+|+|+..+++.+++.+.+++..+ .|+... ..+..+......+.. .........+.++++.|++++.++...+.
T Consensus 254 ~~Es~rwl~~~g~~~~a~~~l~~~a~-~n~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~l~~~~~l~~~~~~~~~~ 330 (521)
T KOG0255|consen 254 PPESPRWLLSKGRIDEAIKILKKIAK-LNGRKLSVKELLRLELLLRPLK--LLFTEPKISFLDLFRTPRLRYRTLYLLFI 330 (521)
T ss_pred cCcChHHHHHcCchHHHHHHHHHHHh-hcCCCCCcHHHHHHHHHhhHhh--hhccCCCCchhhhhcCHHHHHHHHHHHHH
Confidence 78999999999999999999888755 432211 111111110000000 00000113578899999888999999999
Q ss_pred HHHHHHHHhhhhhcccccCChhHHHHHHHHHhcccccccCchhHHHHHHHHHhhcChhHHHHHHHHHHHHHHHHHHhccc
Q 041759 334 GFGIGVVYYGMTLGIENLGFDIYLGVVFNALLEIPNLASTIPSFFLTFFLIQKWNRKSSLLVLFIISGICSIMAVVANDI 413 (525)
Q Consensus 334 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~d~~g~~~~~~~~~~~~~~~~~~~~~~~~~ 413 (525)
++.....++.+.+....+|.+.+......+.... ++....+...|++|||.....+..+..++++...+....
T Consensus 331 ~~~~~~~y~gl~~~~~~lg~~~~~~~~~~~~~~~-------p~~~~~~~~~~~~gR~~~~~~~~~~~~~~~~~~~~~~~~ 403 (521)
T KOG0255|consen 331 WFVFSLVYYGLSLNVSGLGGNIYLNFTLSGLVEL-------PAYFRNGLLLPEFGRRPPLFLSLFLAGIGLLLFGWLPDD 403 (521)
T ss_pred HHHHhHHHHhhhhhhhhcCchHHHHHHHHHHHHh-------hHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHhhcc
Confidence 9889999999999999999999988888888777 888888999999999999999999999999999988766
Q ss_pred cccchhHHHHHHHHHHHHHHHHHHHHHhhhccccCcchhhhhhHHHHHHHHHHHHHHHHHHhhc-cCchhHHHHHHHHHH
Q 041759 414 SNAGKRMRIGLELASLFSAYIAYTVIFIYAIELFPTCVRNSATSIMRLAIIFAAIFSSVLVAAG-SNNEFVSYGVFGLVI 492 (525)
Q Consensus 414 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~r~~~~~~~~~~~~~g~~~~p~i~~~~-~~~~~~~~~~~~~~~ 492 (525)
. ......+...+..++.+..+...+.+..|++|+..|..+.+.......+|++++|.+.... .......+.+++...
T Consensus 404 ~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~el~pt~~r~~~~~~~~~~~~~~~i~ap~~~~~~~~~~~~~~~~~~~~~~ 481 (521)
T KOG0255|consen 404 L--GGWLHWILPLLGKFFIGSAFNLIFLYSAELIPTVVRNTAVGAISAAARLGSILAPLFPLLLRQMFPLLGLILFGWLA 481 (521)
T ss_pred c--hhHHHHHHHHHHHHHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcccchHHHHHHHH
Confidence 1 1124666777777888888888899999999999999999999999999999999998642 223333434445555
Q ss_pred HHHHHHH-HhccCCCCCCccchHHHhc
Q 041759 493 ICCGFFV-ICLPETRGSSLCDTIDQRE 518 (525)
Q Consensus 493 ~~~~~~~-~~~~~~~~~~~~~~~~~~~ 518 (525)
.+..++. .++||++++.+.+..++.+
T Consensus 482 ~l~~~~~~~~lpet~~~~l~~t~~~~~ 508 (521)
T KOG0255|consen 482 LLLGLLSLLLLPETKGKPLPGTLLDAE 508 (521)
T ss_pred HHHHHHHHhcCcccCCCCCchhHHHHH
Confidence 5555444 8889999999888776666
No 7
>COG2271 UhpC Sugar phosphate permease [Carbohydrate transport and metabolism]
Probab=100.00 E-value=9.8e-38 Score=287.41 Aligned_cols=394 Identities=14% Similarity=0.127 Sum_probs=310.7
Q ss_pred HHHHHHHHHHHHHHHHHHhhhcccCccccccCCCCCCCCCCCCCCCCCCceecCCCCccccceeeccccccchhhhhhhH
Q 041759 41 QAILVSLASLFDSQQSFISVYTEAEPTWHCLNNTTCSSASNICMFPKSSWAWDGNPTTTALTIISEWGLECSSAFIKGLP 120 (525)
Q Consensus 41 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~c~~~~~~~~~~~~p~~~~~~i~~~~~~~~~s~~~~g~~ 120 (525)
+++.+.+++...++.+-+.+++ .|.+.+|.++ |..|+|++
T Consensus 30 if~~~fiGYa~fYl~RknF~~a-------------------------------------~p~l~e~~~l---sk~~lG~i 69 (448)
T COG2271 30 IFLSIFIGYAAFYLTRKNFNLA-------------------------------------MPALIEDGGL---SKTQLGIL 69 (448)
T ss_pred HHHHHHHHHHHHHHHHHhHhhc-------------------------------------cHHHHHhcCC---CHHHHHHH
Confidence 8999999999999999999999 9999999999 99999999
Q ss_pred HHHHHHHHHHhHHhhHhcccccCCchHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHhhcccchhhhhheeeEeeecC
Q 041759 121 AASHFTGCLLGIVFLATLADSSLGRKNLLFLSCLTMSVATSLTIFSNNLWIYSLLRFFSGISRATIGTCTIVLLTEKVGT 200 (525)
Q Consensus 121 ~s~~~lg~~~~~~~~G~l~dr~~Grk~~~~~~~~~~~i~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~ 200 (525)
.+.+.+.+.++-++.|.++|| .+.|+.+.+++++.++.+++++++++.+.+.+..+++|...|.-+|.+...++.|+++
T Consensus 70 ~s~f~i~YG~sKf~~G~~sDr-~npr~fm~~gLilsai~nil~Gfs~s~~~~~~l~~lng~fQg~Gwpp~~~~i~~Wfsr 148 (448)
T COG2271 70 GSAFSITYGVSKFVMGVLSDR-SNPRYFMAFGLILSAIVNILFGFSPSLFLFAVLWVLNGWFQGMGWPPCARTITHWFSR 148 (448)
T ss_pred HHHHHHHHHHHHHHhhhhccc-CCCceeehHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHcCc
Confidence 999999999999999999999 9999999999999999999999999999999999999999999999999999999999
Q ss_pred cchhhHHhHHHHHHHHHHHHHHHH---HHhccCCchHHHHHHHHHHHHHHHhHhheeecCCchHhhhcCCHHHHHHHHHh
Q 041759 201 EWRGLVGILDSFFFTIGTLTLPAI---AYTNRSSSWTIIYLWTSIPTLVYSGLLYIFVSESPRWLFMQGRQEEAVEVIKS 277 (525)
Q Consensus 201 ~~r~~~~~~~~~~~~~G~~l~~~l---~~~~~~~~wr~~f~~~~~~~~~~~~~~~~~lpesp~~~~~~~~~~~~~~~~~~ 277 (525)
+|||+..++++++.++|..+.|++ +.+..+.+||..|++.++++++..++.++.++|+|+-.-.. +.++.
T Consensus 149 ~eRG~~~siWn~shNiGGal~~~~~~la~~~~~~~w~~~f~~pgiiaiival~~~~~~rd~Pqs~GLP-~ie~~------ 221 (448)
T COG2271 149 KERGTWWSIWNTSHNIGGALAPLVALLAFFAFHGGWRAAFYFPGIIAIIVALILLFLLRDRPQSEGLP-PIEEY------ 221 (448)
T ss_pred cccCceEEEehhhhhcccchHHHHHHHHHHHhccchhHHHHHHHHHHHHHHHHHHHHhCCCccccCCC-CHHHh------
Confidence 999999999999999999987765 45556779999999999999999988888899988532111 11111
Q ss_pred hCCCcCCccchhhhhhhccCCCCcccccccccchhhhhhhhcchhHHHHHHHHHHHHHHH-HHHHhhhhhcccccCChhH
Q 041759 278 LSPIKDSNQLSLSLVSAVSFGHEPAASSKESSFLSSIRELFVRRWALERTLALMVPGFGI-GVVYYGMTLGIENLGFDIY 356 (525)
Q Consensus 278 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~ 356 (525)
.++.. +..+.+++.+. ......-.+.+++||..|...+..++.+..= .+..+...++.+..|++..
T Consensus 222 ----~~d~~---e~~~~~~~~~~------ls~~~i~~~YVL~Nk~iW~la~a~vfvYivR~gi~dW~p~YL~e~k~~s~~ 288 (448)
T COG2271 222 ----RGDPL---EIYEEEKENEG------LTAWQIFVKYVLKNKLIWLLALANVFVYVVRYGINDWGPLYLSEVKGFSLV 288 (448)
T ss_pred ----hcCch---hhhhhhccCCC------ccHHHHHHHHHHcChHHHHHHHHHHHHHHHHHHHhhhHHHHHHHhcCCCHH
Confidence 00000 00000000000 0000134566899999888777777766653 4555665566667899999
Q ss_pred HHHHHHHHhcccccccCchhHHHHHHHHHhh--cChhHHHHHHHHHHHHHHHHHHhccccccchhHHHHHHHHHHHHHHH
Q 041759 357 LGVVFNALLEIPNLASTIPSFFLTFFLIQKW--NRKSSLLVLFIISGICSIMAVVANDISNAGKRMRIGLELASLFSAYI 434 (525)
Q Consensus 357 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~d~~--g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 434 (525)
.+....++..+ ++++|+++.||++||+ |||....+.+.+.....++..+.... .++.+..++.+..|+...+
T Consensus 289 ~a~~a~~lfE~----agl~G~Ll~GwlSDklfkgrR~p~~~i~~~~i~~~~~~~w~~~~--~~~~l~~~~l~~iGf~IyG 362 (448)
T COG2271 289 KANWAISLFEV----AGLPGTLLAGWLSDKLFKGRRGPMALIFMLLITASLVLYWLAPN--GSYLLDAILLFIIGFLIYG 362 (448)
T ss_pred HHHHHHHHHHH----HhhHHHHHHHHHHHHhcccccchHHHHHHHHHHHHHHHHHcCCC--ccHHHHHHHHHHHHHHHhh
Confidence 99999999999 9999999999999996 67766655555544444444444333 2456777777777777777
Q ss_pred HHHHHHhhhccccCcchhhhhhHHHHHHHHH-HHHHHHHHHhh--ccCchhHHHHHHHHHHHHHHHHHHh
Q 041759 435 AYTVIFIYAIELFPTCVRNSATSIMRLAIIF-AAIFSSVLVAA--GSNNEFVSYGVFGLVIICCGFFVIC 501 (525)
Q Consensus 435 ~~~~~~~~~~~~~p~~~r~~~~~~~~~~~~~-g~~~~p~i~~~--~~~~~~~~~~~~~~~~~~~~~~~~~ 501 (525)
..-+.-..+.|..|++..|++.|+...+.++ |+..+.+..++ +..++...|.++.+.++++.++...
T Consensus 363 PqmLiGl~a~e~~pK~AaGtA~Gf~Glf~Yl~Ga~~a~~~~g~i~d~~gW~g~Fi~~~~~a~l~~lll~~ 432 (448)
T COG2271 363 PQMLIGLAAAEFVPKKAAGTATGFVGLFAYLIGAALAGLPLGYIADTWGWDGGFIVLSIAALLAILLLLP 432 (448)
T ss_pred HHHHHHHHHhccccHhhccchhchhhhHHHHhhHHhcCCcceeeEecCCCcchHHHHHHHHHHHHHHHHH
Confidence 7777788899999999999999999999998 88888887775 3346667777776666666554433
No 8
>PRK10077 xylE D-xylose transporter XylE; Provisional
Probab=100.00 E-value=1.5e-37 Score=315.60 Aligned_cols=422 Identities=18% Similarity=0.270 Sum_probs=292.5
Q ss_pred HHHHHHHHHHHHHHHHHHHhhhcccCccccccCCCCCCCCCCCCCCCCCCceecCCCCccccceeecc--------cccc
Q 041759 40 EQAILVSLASLFDSQQSFISVYTEAEPTWHCLNNTTCSSASNICMFPKSSWAWDGNPTTTALTIISEW--------GLEC 111 (525)
Q Consensus 40 ~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~c~~~~~~~~~~~~p~~~~~~i~~~~--------~~~~ 111 (525)
...++.+++.+.+++|...++.. .|.++++| ++
T Consensus 12 ~~~~~~~~~~~~~~~~~~~~~~~-------------------------------------~~~~~~~~~~~~~~~~~~-- 52 (479)
T PRK10077 12 SITLVATLGGLLFGYDTAVISGT-------------------------------------VESLNTVFVAPQNLSESA-- 52 (479)
T ss_pred HHHHHHHHHHHhcCcccceehHh-------------------------------------HHHHHHHhcccccccccC--
Confidence 36777888899999998888877 55555544 88
Q ss_pred chhhhhhhHHHHHHHHHHHhHHhhHhcccccCCchHHHHHHHHHHHHHHHHHHhh------------hhHHHHHHHHHHH
Q 041759 112 SSAFIKGLPAASHFTGCLLGIVFLATLADSSLGRKNLLFLSCLTMSVATSLTIFS------------NNLWIYSLLRFFS 179 (525)
Q Consensus 112 ~s~~~~g~~~s~~~lg~~~~~~~~G~l~dr~~Grk~~~~~~~~~~~i~~~~~~~~------------~~~~~l~~~r~l~ 179 (525)
+..+.+++.+++.++.+++++++|+++|| +|||++++++.++++++.++++++ ++++.++++|+++
T Consensus 53 -~~~~~~~~~s~~~ig~~~~~~~~G~l~dr-~Grr~~~~~~~~l~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~R~l~ 130 (479)
T PRK10077 53 -ANSLLGFCVASALIGCIIGGALGGYCSNR-FGRRDSLKIAAVLFFISALGSAWPEFGFTSIGPDNTGYVPEFVIYRIIG 130 (479)
T ss_pred -ChhHHHHHHHHHHHHHHHHHHHHHHHHHH-hccHHHHHHHHHHHHHHHHHHHhhccccccccccchhHHHHHHHHHHHH
Confidence 88999999999999999999999999999 999999999999999998888763 2357789999999
Q ss_pred hhcccchhhhhheeeEeeecCcchhhHHhHHHHHHHHHHHHHHHHHHhc---------cCCchHHHHHHHHHHHHHHHhH
Q 041759 180 GISRATIGTCTIVLLTEKVGTEWRGLVGILDSFFFTIGTLTLPAIAYTN---------RSSSWTIIYLWTSIPTLVYSGL 250 (525)
Q Consensus 180 G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~l~~~l~~~~---------~~~~wr~~f~~~~~~~~~~~~~ 250 (525)
|++.|...+...++++|++|+++|++++++.+.+..+|.++++.++..+ ...+||++|++.+++.++.. +
T Consensus 131 G~~~g~~~~~~~~~i~e~~~~~~rg~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~~gWr~~f~~~~~~~~~~~-~ 209 (479)
T PRK10077 131 GIGVGLASMLSPMYIAEIAPAHIRGKLVSFNQFAIIFGQLVVYFVNYFIARSGDASWLNTDGWRYMFASEAIPALLFL-M 209 (479)
T ss_pred hhhHhHHhhHHHHHHHhhCChhhhhHHHHHHHHHHHHHHHHHHHHHHHHhccCcccccccCChHHHHHHHHHHHHHHH-H
Confidence 9999999999999999999999999999999999999999988775432 35699999999888888776 5
Q ss_pred hheeecCCchHhhhcCCHHHHHHHHHhhCCCcCCccchhhhhhhccCCCCcccccccccchhhhhhhhcchhHHHHHHHH
Q 041759 251 LYIFVSESPRWLFMQGRQEEAVEVIKSLSPIKDSNQLSLSLVSAVSFGHEPAASSKESSFLSSIRELFVRRWALERTLAL 330 (525)
Q Consensus 251 ~~~~lpesp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~ 330 (525)
..+++||+|+|+..+++.++.++..++..+ .++. .....+..+...+. + ...+..+.-. .......
T Consensus 210 ~~~~l~~s~~~l~~~~~~~~~~~~~~~~~~-~~~~--~~~~~~~~~~~~~~----~-----~~~~~~~~~~--~~~~~~~ 275 (479)
T PRK10077 210 LLYFVPETPRYLMSRGKQEQAEGILRKIMG-NTLA--TQALQEIKHSLDHG----R-----KTGGKLLMFG--VGVIVIG 275 (479)
T ss_pred HHHcCCCCcHHHHHcCCHHHHHHHHHHHcC-ChhH--HHHHHHHHHHHHHh----h-----hhhhhhcchh--HHHHHHH
Confidence 677899999998777777776666555522 1111 11100000000000 0 0000111100 0111111
Q ss_pred H-HHHH----HHHHHHhhhhhcccccCChhHHHHHHHHHhcccccccCchhHHHHHHHHHhhcChhHHHHHHHHHHHHHH
Q 041759 331 M-VPGF----GIGVVYYGMTLGIENLGFDIYLGVVFNALLEIPNLASTIPSFFLTFFLIQKWNRKSSLLVLFIISGICSI 405 (525)
Q Consensus 331 ~-~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~d~~g~~~~~~~~~~~~~~~~~ 405 (525)
+ ...+ ......++.|.+.++.|.+............+ +.+++.++.+++.||+|||+++..+.++.+++.+
T Consensus 276 ~~~~~~~~~~~~~~~~~~~p~i~~~~g~~~~~~~~~~~~~~~----~~~i~~~~~g~l~dr~g~r~~~i~~~~~~~v~~~ 351 (479)
T PRK10077 276 VMLSVFQQFVGINVVLYYAPEIFKTLGASTDIALLQTIIVGV----INLTFTVLAIMTVDKFGRKPLQIIGALGMAIGMF 351 (479)
T ss_pred HHHHHHHHHhChhHHHHHHHHHHHHcCCCCchHHHHHHHHHH----HHHHHHHHHHHHHHHhcChHHHHHhHHHHHHHHH
Confidence 1 1111 12233445566666777765544444333333 4558899999999999999999999998888877
Q ss_pred HHHHhccccccchhHHHHHHHHHHHHHHHH-HHHHHhhhccccCcchhhhhhHHHHHHHHHHHHHHHHHHhh--------
Q 041759 406 MAVVANDISNAGKRMRIGLELASLFSAYIA-YTVIFIYAIELFPTCVRNSATSIMRLAIIFAAIFSSVLVAA-------- 476 (525)
Q Consensus 406 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~p~~~r~~~~~~~~~~~~~g~~~~p~i~~~-------- 476 (525)
++......+ ..........++.+.+.+.. .+..+.++.|.+|++.|++++|+.+....+|+++++.+.+.
T Consensus 352 ~l~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~g~~~~~~~~g~~~~~~~~p~~~~~~~~~ 430 (479)
T PRK10077 352 SLGTAFYTQ-APGIVALLSMLFYVAAFAMSWGPVCWVLLSEIFPNAIRGKALAIAVAAQWIANYFVSWTFPMMDKNSWLV 430 (479)
T ss_pred HHHHHHhcC-cccHHHHHHHHHHHHHHhccccchhHHHhHhhCChhHHHHHHHHHHHHHHHHHHHHHHHhHHHHhccchh
Confidence 765443220 11212222333333333332 36778999999999999999999999999998888666542
Q ss_pred ccCchhHHHHHHHHHHHHHHHHH-HhccCCCCCCccchHHHhcccCC
Q 041759 477 GSNNEFVSYGVFGLVIICCGFFV-ICLPETRGSSLCDTIDQREHKDS 522 (525)
Q Consensus 477 ~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~ 522 (525)
...+....+.+++++++++.++. ++.||+|+++.+|.+++.++..|
T Consensus 431 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~ 477 (479)
T PRK10077 431 AHFHNGFSYWIYGCMGVLAALFMWKFVPETKGKTLEEMEALWEPETK 477 (479)
T ss_pred hhccCccHHHHHHHHHHHHHHHHHhccccCCCCCHHHHHHHHhhccc
Confidence 12334556666666655555543 45689998888776666555444
No 9
>PRK10642 proline/glycine betaine transporter; Provisional
Probab=100.00 E-value=1.2e-36 Score=308.16 Aligned_cols=393 Identities=16% Similarity=0.109 Sum_probs=270.2
Q ss_pred HHHHHHHHHHHHHHHHHHHhhhcccCccccccCCCCCCCCCCCCCCCCCCceecCCCCccccceeeccccccchh-hhhh
Q 041759 40 EQAILVSLASLFDSQQSFISVYTEAEPTWHCLNNTTCSSASNICMFPKSSWAWDGNPTTTALTIISEWGLECSSA-FIKG 118 (525)
Q Consensus 40 ~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~c~~~~~~~~~~~~p~~~~~~i~~~~~~~~~s~-~~~g 118 (525)
+......++++++++|....++. .|.+.++|+...+.. ...+
T Consensus 16 ~~~~~~~~g~~~~~~d~~~~~~~-------------------------------------~~~i~~~~~~~~~~~~~~~~ 58 (490)
T PRK10642 16 KAITAASLGNAMEWFDFGVYGFV-------------------------------------AYALGKVFFPGADPSVQMIA 58 (490)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHH-------------------------------------HHHHHHhhCCCCCcHHHHHH
Confidence 36777889999999999999999 889999987521111 1122
Q ss_pred h--HHHHHHHHHHHhHHhhHhcccccCCchHHHHHHHHHHHHHHHHHHhhhhHHH--------HHHHHHHHhhcccchhh
Q 041759 119 L--PAASHFTGCLLGIVFLATLADSSLGRKNLLFLSCLTMSVATSLTIFSNNLWI--------YSLLRFFSGISRATIGT 188 (525)
Q Consensus 119 ~--~~s~~~lg~~~~~~~~G~l~dr~~Grk~~~~~~~~~~~i~~~~~~~~~~~~~--------l~~~r~l~G~~~~~~~~ 188 (525)
. +.++.++++.++++++|+++|| +|||+++.+++++++++++++++++|++. ++++|+++|++.|...+
T Consensus 59 ~~~~~~~~~l~~~ig~~~~G~l~Dr-~Grr~~l~~~~~l~~i~~~~~a~~~~~~~~g~~a~~~l~~~R~l~G~g~g~~~~ 137 (490)
T PRK10642 59 ALATFSVPFLIRPLGGLFFGMLGDK-YGRQKILAITIVIMSISTFCIGLIPSYATIGIWAPILLLLCKMAQGFSVGGEYT 137 (490)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHh-cccHHHHHHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHHHhHhHhhHH
Confidence 2 2578889999999999999999 99999999999999999999999999875 89999999999999999
Q ss_pred hhheeeEeeecCcchhhHHhHHHHHHHHHHHHHHHHHHhc---------cCCchHHHHHHHHHHHHHHHhHhheeecCCc
Q 041759 189 CTIVLLTEKVGTEWRGLVGILDSFFFTIGTLTLPAIAYTN---------RSSSWTIIYLWTSIPTLVYSGLLYIFVSESP 259 (525)
Q Consensus 189 ~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~l~~~l~~~~---------~~~~wr~~f~~~~~~~~~~~~~~~~~lpesp 259 (525)
...+++.|++|+++|+++.++...+..+|.++++.+..++ ..+|||++|++.+++.++.. ++...+||+|
T Consensus 138 ~~~~~~~e~~p~~~Rg~~~~~~~~~~~~G~~lg~~~~~~~~~~~~~~~~~~~gWR~~f~i~~~~~l~~~-~~~~~~~esp 216 (490)
T PRK10642 138 GASIFVAEYSPDRKRGFMGSWLDFGSIAGFVLGAGVVVLISTIVGEANFLDWGWRIPFFIALPLGIIGL-YLRHALEETP 216 (490)
T ss_pred HHHHHHHHhCCCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHHHhcCccHHHHHHHHHHHHHHHH-HHHHcCCCCh
Confidence 9999999999999999999999999888888887653221 25799999999887666544 5667889999
Q ss_pred hHhhhcCCHHHHHHHHHhhCCCcCCccchhhhhhhccCCCCcccccccccchhhhhhhhcchhHHHHHHHHHH----HHH
Q 041759 260 RWLFMQGRQEEAVEVIKSLSPIKDSNQLSLSLVSAVSFGHEPAASSKESSFLSSIRELFVRRWALERTLALMV----PGF 335 (525)
Q Consensus 260 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~----~~~ 335 (525)
+|...+++.++. . .+ .. .+ .++ .++++++++. ++....... ...
T Consensus 217 ~~~~~~~~~~~~--------~-~~--~~----------~~----~~~-----~~~~~~~~~~--~~~~~~~~~~~~~~~~ 264 (490)
T PRK10642 217 AFQQHVDKLEQG--------D-RE--GL----------QD----GPK-----VSFKEIATKH--WRSLLTCIGLVIATNV 264 (490)
T ss_pred hHHHHHHhhhhh--------c-cc--cc----------cc----ccc-----CCHHHHHHHh--HHHHHHHHHHHHHHHH
Confidence 864322111100 0 00 00 00 000 2455555532 111221111 112
Q ss_pred HHHHHHhhhhhcc-cccCChhHHHHHHHHHhcccccccCchhHHHHHHHHHhhcChhHHHHHHHHHHHHHHH-HHHhccc
Q 041759 336 GIGVVYYGMTLGI-ENLGFDIYLGVVFNALLEIPNLASTIPSFFLTFFLIQKWNRKSSLLVLFIISGICSIM-AVVANDI 413 (525)
Q Consensus 336 ~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~d~~g~~~~~~~~~~~~~~~~~~-~~~~~~~ 413 (525)
........+|.++ +.+|.+............+ +.+++.++.|+++||+|||+.+..+.++..+..+. +......
T Consensus 265 ~~~~~~~~~p~~l~~~~g~s~~~~~~~~~~~~~----~~~~~~~~~g~l~dr~grr~~~~~~~~~~~~~~~~~~~~~~~~ 340 (490)
T PRK10642 265 TYYMLLTYMPSYLSHNLHYSEDHGVLIIIAIMI----GMLFVQPVMGLLSDRFGRRPFVILGSVALFVLAIPAFILINSN 340 (490)
T ss_pred HHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHH----HHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHHhCC
Confidence 2222333445555 4567776665555555445 66688899999999999999888777654433322 2222221
Q ss_pred cccchhHHHHHHHHHHHHHHHHHHHHHhhhccccCcchhhhhhHHHHHHHHHHHHHHHHHHhhc--c-CchhHHHHHHHH
Q 041759 414 SNAGKRMRIGLELASLFSAYIAYTVIFIYAIELFPTCVRNSATSIMRLAIIFAAIFSSVLVAAG--S-NNEFVSYGVFGL 490 (525)
Q Consensus 414 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~r~~~~~~~~~~~~~g~~~~p~i~~~~--~-~~~~~~~~~~~~ 490 (525)
+....++..++.+++.+...+....+..|.+|++.|+++.|+.+....+++.++|.+.+.. . .+...++.+..+
T Consensus 341 ---~~~~~~~~~~~~g~~~~~~~g~~~~~~~~~~p~~~Rg~~~g~~~~~~~~~g~~~p~i~g~l~~~~~~~~~~~~~~~~ 417 (490)
T PRK10642 341 ---VIGLIFAGLLMLAVILNCFTGVMASTLPAMFPTHIRYSALAAAFNISVLVAGLTPTLAAWLVESTQNLMMPAYYLMV 417 (490)
T ss_pred ---CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCccchHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCchHHHHHHHH
Confidence 1223444455555666666667778888999999999999987777777788888888742 1 223444444555
Q ss_pred HHHHHHHHHHhccCCCCCCc
Q 041759 491 VIICCGFFVICLPETRGSSL 510 (525)
Q Consensus 491 ~~~~~~~~~~~~~~~~~~~~ 510 (525)
..+++.+..+++||++++..
T Consensus 418 ~~~i~~~~~~~~pes~~~~~ 437 (490)
T PRK10642 418 VAVIGLITGVTMKETANRPL 437 (490)
T ss_pred HHHHHHHHHHHhccccCCCC
Confidence 55555566666788766544
No 10
>TIGR00879 SP MFS transporter, sugar porter (SP) family. This model represent the sugar porter subfamily of the major facilitator superfamily (pfam00083)
Probab=100.00 E-value=1.3e-35 Score=301.86 Aligned_cols=423 Identities=21% Similarity=0.249 Sum_probs=287.7
Q ss_pred HHHHHHHHHHHHHHHHHHhhhcccCccccccCCCCCCCCCCCCCCCCCCceecCCCCccccceeecccccc-----chhh
Q 041759 41 QAILVSLASLFDSQQSFISVYTEAEPTWHCLNNTTCSSASNICMFPKSSWAWDGNPTTTALTIISEWGLEC-----SSAF 115 (525)
Q Consensus 41 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~c~~~~~~~~~~~~p~~~~~~i~~~~~~~~-----~s~~ 115 (525)
..+++.++.+...++....... .+.+..+++... .+..
T Consensus 29 ~~~~~~~~~~~~~~~~~~~~~~-------------------------------------~~~~~~~~~~~~~~~~~~~~~ 71 (481)
T TIGR00879 29 LSLIAAIGGLMFGYDTGVIGGA-------------------------------------LALPAFEFKFTSANSDSYSSS 71 (481)
T ss_pred HHHHHHHHHHhcccccchhhhh-------------------------------------hhcHHHHHhcCCcccCCCChh
Confidence 5556666677777787777777 777777777610 1389
Q ss_pred hhhhHHHHHHHHHHHhHHhhHhcccccCCchHHHHHHHHHHHHHHHHHHhh---hhHHHHHHHHHHHhhcccchhhhhhe
Q 041759 116 IKGLPAASHFTGCLLGIVFLATLADSSLGRKNLLFLSCLTMSVATSLTIFS---NNLWIYSLLRFFSGISRATIGTCTIV 192 (525)
Q Consensus 116 ~~g~~~s~~~lg~~~~~~~~G~l~dr~~Grk~~~~~~~~~~~i~~~~~~~~---~~~~~l~~~r~l~G~~~~~~~~~~~~ 192 (525)
+.+++.+++.++..++++++|+++|| +|||++++++.++++++.+++.+. .+++.++++|+++|++.+...+...+
T Consensus 72 ~~~~~~~~~~~~~~i~~~~~g~l~d~-~grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~l~G~~~~~~~~~~~~ 150 (481)
T TIGR00879 72 LWGLVVSIFLVGGFIGALFAGWLSDR-FGRKKSLLIIALLFVIGAILMGLAAFALSVEMLIVGRVLLGIGVGIASALVPM 150 (481)
T ss_pred HHHHHHHHHHHHHHHHHHHhhHhhhh-hhhHHHHHHHHHHHHHHHHHHHHhccccchHHHHHHHHHHHhhhhHHHhHHHH
Confidence 99999999999999999999999999 999999999999999999998654 35668999999999999999999999
Q ss_pred eeEeeecCcchhhHHhHHHHHHHHHHHHHHHHH---Hhc-cCCchHHHHHHHHHHHHHHHhHhheeecCCchHhhhcCCH
Q 041759 193 LLTEKVGTEWRGLVGILDSFFFTIGTLTLPAIA---YTN-RSSSWTIIYLWTSIPTLVYSGLLYIFVSESPRWLFMQGRQ 268 (525)
Q Consensus 193 ~i~~~~~~~~r~~~~~~~~~~~~~G~~l~~~l~---~~~-~~~~wr~~f~~~~~~~~~~~~~~~~~lpesp~~~~~~~~~ 268 (525)
++.|++|+++|++++++.+.+..+|.+++++++ ... ...+||+.|++.++..++.. +..+++||+|++...+++.
T Consensus 151 ~i~~~~~~~~r~~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~w~~~f~~~~~~~~~~~-~~~~~l~~~~~~~~~~~~~ 229 (481)
T TIGR00879 151 YLSEIAPKALRGALTSLYQLAITFGILVAYGFGSGKVSLNNTLGWRIPLGLQLIPAGLLF-LGLFFLPESPRWLVGKGRV 229 (481)
T ss_pred HHHccCChhhhhhhhhHHHHHHHHHHHHHHHHHHHhhcCCCCccHHHHHHHHHHHHHHHH-HHHhcCCCChHHHHHcCCh
Confidence 999999999999999999999999999999988 443 46799999999777666655 6677889999887666666
Q ss_pred HHHHHHHHhhCCCcCCccchhhh-hhhccCCCCcccccccccchhhhhhhhcchhHHHHHHHHHHHHHH----HHHHHhh
Q 041759 269 EEAVEVIKSLSPIKDSNQLSLSL-VSAVSFGHEPAASSKESSFLSSIRELFVRRWALERTLALMVPGFG----IGVVYYG 343 (525)
Q Consensus 269 ~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~----~~~~~~~ 343 (525)
++..+..++... .++.+..... .+......+.+.+.++.. .....+..++ ..+...+..++..+. .....+.
T Consensus 230 ~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~ 306 (481)
T TIGR00879 230 EEARKSLARLRG-TSGEDKELLDELELIDIKRSIEKRSVQPS-WGSLFSSTRR-IRRRLFLGVVLQWFQQFTGINAIMYY 306 (481)
T ss_pred HHHHHHHHHHhC-CCCCcHHHHHHHHHHHHHHHHHHhhcccc-HHHHHhcCch-hHHHHHHHHHHHHHHHHhCCeehHHH
Confidence 555544444322 1111111000 000000000000000000 1122222222 112222222222222 2233455
Q ss_pred hhhcccccCChhHHHHHHHHHhcccccccCchhHHHHHHHHHhhcChhHHHHHHHHHHHHHHHHHHhcc--ccc----cc
Q 041759 344 MTLGIENLGFDIYLGVVFNALLEIPNLASTIPSFFLTFFLIQKWNRKSSLLVLFIISGICSIMAVVAND--ISN----AG 417 (525)
Q Consensus 344 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~d~~g~~~~~~~~~~~~~~~~~~~~~~~~--~~~----~~ 417 (525)
.+.+.++.|.+............+ +.+++.++.+++.||++||+.+.++..+.+++.+++..... ... .+
T Consensus 307 ~~~~~~~~g~~~~~~~~~~~~~~~----~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 382 (481)
T TIGR00879 307 SPTIFENAGVSTDHAFLVSIIVGA----VNFAFTFVAIFLVDRFGRRPLLLIGAAGMAICLFVLGILGASFVTGSSKSSG 382 (481)
T ss_pred HHHHHHHcCCCchHHHHHHHHHHH----HHHHHHHHHHHHHHHhcchHHHHHHHHHHHHHHHHHHHHhhcccCCcccchh
Confidence 677777788887666666665555 66689999999999999999999888887777766653211 100 01
Q ss_pred hhHHHHHHHHHHHHHH-HHHHHHHhhhccccCcchhhhhhHHHHHHHHHHHHHHHHHHhh--ccCchhHHHHHHHHHHHH
Q 041759 418 KRMRIGLELASLFSAY-IAYTVIFIYAIELFPTCVRNSATSIMRLAIIFAAIFSSVLVAA--GSNNEFVSYGVFGLVIIC 494 (525)
Q Consensus 418 ~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~p~~~r~~~~~~~~~~~~~g~~~~p~i~~~--~~~~~~~~~~~~~~~~~~ 494 (525)
+... ....+...+.+ ...+....+..|.+|++.|+++.++.+....+|++++|.+.+. ...++...|++.++++++
T Consensus 383 ~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~lg~~i~~~~~~~~~~~~~~~~~f~~~~~~~~~ 461 (481)
T TIGR00879 383 NVAI-VFILLFIAFFAMGWGPVPWVIVSEIFPLSLRPKGISIAVAANWLANFIVGFLFPTMLESIGVGGVFIFFGGLNVL 461 (481)
T ss_pred HHHH-HHHHHHHHHHHccccCeehhhhhccCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCccceehhHHHHHHH
Confidence 2222 22222222333 2335667778999999999999999999999999999998884 333566677777777766
Q ss_pred HHHHH-HhccCCCCCCc
Q 041759 495 CGFFV-ICLPETRGSSL 510 (525)
Q Consensus 495 ~~~~~-~~~~~~~~~~~ 510 (525)
+.++. ++.+|+++++.
T Consensus 462 ~~i~~~~~~~~~~~~~~ 478 (481)
T TIGR00879 462 GLIFVYFFLPETKGRTL 478 (481)
T ss_pred HHHHHheecccCCCCCh
Confidence 66554 44577766553
No 11
>PRK09556 uhpT sugar phosphate antiporter; Reviewed
Probab=100.00 E-value=2.2e-35 Score=297.38 Aligned_cols=393 Identities=16% Similarity=0.081 Sum_probs=278.4
Q ss_pred HHHHHHHHHHHHHHHHHHhhhcccCccccccCCCCCCCCCCCCCCCCCCceecCCCCccccceeeccccccchhhhhhhH
Q 041759 41 QAILVSLASLFDSQQSFISVYTEAEPTWHCLNNTTCSSASNICMFPKSSWAWDGNPTTTALTIISEWGLECSSAFIKGLP 120 (525)
Q Consensus 41 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~c~~~~~~~~~~~~p~~~~~~i~~~~~~~~~s~~~~g~~ 120 (525)
++.+.++++++...|+.+.+.+ .|.+++|+|+ +..+.|++
T Consensus 30 i~~~~~~~~~~~y~~r~~~~~~-------------------------------------~~~i~~~~~~---s~~~~g~~ 69 (467)
T PRK09556 30 SYLVVFIGYLTMYLIRKNFKAA-------------------------------------QNDMISTYGL---STTELGMI 69 (467)
T ss_pred HHHHHHHHHHHHHHHhcChhhh-------------------------------------hHHHHHhcCC---CHHHHHHH
Confidence 7888888999999999999998 9999999999 99999999
Q ss_pred HHHHHHHHHHhHHhhHhcccccCCchHHHHHHHHHHHHHHHHHHh-----hhhHHHHHHHHHHHhhcccchhhhhheeeE
Q 041759 121 AASHFTGCLLGIVFLATLADSSLGRKNLLFLSCLTMSVATSLTIF-----SNNLWIYSLLRFFSGISRATIGTCTIVLLT 195 (525)
Q Consensus 121 ~s~~~lg~~~~~~~~G~l~dr~~Grk~~~~~~~~~~~i~~~~~~~-----~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~ 195 (525)
.+++.+++.+++++.|+++|| +|||+++.++.++++++.++.++ ++|++.+++.|+++|++.+...+...++++
T Consensus 70 ~s~~~~~~~~~~~~~G~l~Dr-~g~r~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~ 148 (467)
T PRK09556 70 GLGFSITYGVGKTLVGYYADG-KNTKQFLPFLLILSAICMLGFGASLGSGSVSLGLMIALWALSGFFQSTGGPCSYSTIT 148 (467)
T ss_pred HHHHHHHHHHHHhhhhhHhhc-cCccchHHHHHHHHHHHHHHHHHHHhcccchHHHHHHHHHHHHHHHhccchHHHHHHH
Confidence 999999999999999999999 99999999988888877776665 589999999999999999999999999999
Q ss_pred eeecCcchhhHHhHHHHHHHHHHHHHHHHHH-hccC---CchHHHHHHHHHHHHHHHhHhheeecCCchHhhhcCCHHHH
Q 041759 196 EKVGTEWRGLVGILDSFFFTIGTLTLPAIAY-TNRS---SSWTIIYLWTSIPTLVYSGLLYIFVSESPRWLFMQGRQEEA 271 (525)
Q Consensus 196 ~~~~~~~r~~~~~~~~~~~~~G~~l~~~l~~-~~~~---~~wr~~f~~~~~~~~~~~~~~~~~lpesp~~~~~~~~~~~~ 271 (525)
|++|+++|+++++++..+.++|.+++++++. .... .+||..|.+.+++.++..++.+++++|+|+..... +.++
T Consensus 149 ~~~~~~~rg~a~gi~~~~~~lG~~l~~~i~~~~~~~~~~~~~~~~f~~~g~~~~~~~i~~~~~~~~~p~~~~~~-~~~~- 226 (467)
T PRK09556 149 RWTPRRKRGRFLGFWNISHNLGGAGAGGVALWGANYFFDGHVIGMFIFPSIIALIIGFIGLRYGSDSPEELGWG-KAEE- 226 (467)
T ss_pred HHcCccceeeeEEeeecccchhhhHHHHHHHHHHHhhccCcchhHHHHHHHHHHHHHHHHHHhCCCChhhcCCC-Chhh-
Confidence 9999999999999999999999999988743 3222 26999999988888877656666667766421000 0000
Q ss_pred HHHHHhhCCCcCCccchhhhhhhccCCCCcccccccccchhh-hhhhhcchhHHHHHHHHHHHHHHHHHHHhhhhhcc-c
Q 041759 272 VEVIKSLSPIKDSNQLSLSLVSAVSFGHEPAASSKESSFLSS-IRELFVRRWALERTLALMVPGFGIGVVYYGMTLGI-E 349 (525)
Q Consensus 272 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~ 349 (525)
. . + + ....+ + ++.+ +++.+.... .+..+++|.++...+..++.........+..|.++ +
T Consensus 227 --~---~-~-~-~~~~~----~--~~~~-----~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~p~yl~~ 287 (467)
T PRK09556 227 --I---F-G-E-PISEE----D--KETE-----STDMTKWQIFVEYVLKNPVIWLLCFANIFLYIVRIGIDNWSPVYAFQ 287 (467)
T ss_pred --c---c-c-C-ccchh----h--hccc-----cccCcHHHHHHHHHHcChHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 0 0 0 0 00000 0 0000 000000011 23377888877666555554444433444455554 5
Q ss_pred ccCChhHHHHHHHHHhcccccccCchhHHHHHHHHHhhcChhHHHHHHHHHHHHHHHHHHhccccccchhHHHHHHHHHH
Q 041759 350 NLGFDIYLGVVFNALLEIPNLASTIPSFFLTFFLIQKWNRKSSLLVLFIISGICSIMAVVANDISNAGKRMRIGLELASL 429 (525)
Q Consensus 350 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~d~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 429 (525)
.+|.+..+.+.......+ +.+++.++.|+++||++||+.......+..+...++...... +.....+..++.+
T Consensus 288 ~~g~s~~~a~~~~~~~~~----~~~ig~~~~G~lsDr~g~r~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~G 360 (467)
T PRK09556 288 ELGFSKEDAINTFTLFEI----GALVGSLLWGWLSDLANGRRALVACIALALIIFTLGVYQHAT---SEYMYLASLFALG 360 (467)
T ss_pred ccCCCHHHHHHHHHHHHH----HHHHHHHHHHHHHHHHCCCchHHHHHHHHHHHHHHHHHHhcC---cHHHHHHHHHHHH
Confidence 689998888777776666 777999999999999999887766544443333222222111 1223334444444
Q ss_pred HHHHHHHHHHHhhhccccCcchhhhhhHHHHHHHHH-HHHHHHHHHhh--c------------cCchhHHHHHHHHHHHH
Q 041759 430 FSAYIAYTVIFIYAIELFPTCVRNSATSIMRLAIIF-AAIFSSVLVAA--G------------SNNEFVSYGVFGLVIIC 494 (525)
Q Consensus 430 ~~~~~~~~~~~~~~~~~~p~~~r~~~~~~~~~~~~~-g~~~~p~i~~~--~------------~~~~~~~~~~~~~~~~~ 494 (525)
++.............|.+|++.+|++.|+.+...++ |..++|.+.|. + ..++...|.+++++.++
T Consensus 361 ~~~~~~~~~~~~~~~~~~p~~~~g~a~gi~~~~g~l~g~~~~~~~~G~i~~~~~~g~~~~~~~~~~~~~~f~~~~~~~~~ 440 (467)
T PRK09556 361 FLVFGPQLLIGVAAVGFVPKKAIGVANGIKGTFAYLFGDSFAKVGLGMIADPTKNGTPIFGYTLTGWAGTFAALDIAAIG 440 (467)
T ss_pred HHHhhHHHHHHHHHHhhcchhhHHHHHHHHHHHHHHHhHHHHhhhHHHHhcccccccccccccccChHHHHHHHHHHHHH
Confidence 333333333345667999999999999999999986 77899999884 3 23466777777777777
Q ss_pred HHHHHHhc
Q 041759 495 CGFFVICL 502 (525)
Q Consensus 495 ~~~~~~~~ 502 (525)
+.+..+++
T Consensus 441 ~~~~~~~~ 448 (467)
T PRK09556 441 CICLMAIV 448 (467)
T ss_pred HHHHHHHH
Confidence 66655544
No 12
>PRK10406 alpha-ketoglutarate transporter; Provisional
Probab=100.00 E-value=1.4e-34 Score=288.73 Aligned_cols=375 Identities=14% Similarity=0.113 Sum_probs=253.9
Q ss_pred HHHHHHHHHHHHHHHHHHhhhcccCccccccCCCCCCCCCCCCCCCCCCceecCCCCccccceeeccccccchhhhhhh-
Q 041759 41 QAILVSLASLFDSQQSFISVYTEAEPTWHCLNNTTCSSASNICMFPKSSWAWDGNPTTTALTIISEWGLECSSAFIKGL- 119 (525)
Q Consensus 41 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~c~~~~~~~~~~~~p~~~~~~i~~~~~~~~~s~~~~g~- 119 (525)
.+...+++++++.+|..+.+++ .|.+.++++....+..+.+.
T Consensus 23 ~~~~~~~~~~~~~~d~~~~~~~-------------------------------------~~~l~~~~~~~~~~~~~~~~~ 65 (432)
T PRK10406 23 AIVGASSGNLVEWFDFYVYSFC-------------------------------------SLYFAHIFFPSGNTTTQLLQT 65 (432)
T ss_pred HHHHHHHHHHHHHHHHHHHHHH-------------------------------------HHHHHHHhCCCCCchHHHHHH
Confidence 5666778999999999999999 89999998521114444443
Q ss_pred --HHHHHHHHHHHhHHhhHhcccccCCchHHHHHHHHHHHHHHHHHHhhhhHH--------HHHHHHHHHhhcccchhhh
Q 041759 120 --PAASHFTGCLLGIVFLATLADSSLGRKNLLFLSCLTMSVATSLTIFSNNLW--------IYSLLRFFSGISRATIGTC 189 (525)
Q Consensus 120 --~~s~~~lg~~~~~~~~G~l~dr~~Grk~~~~~~~~~~~i~~~~~~~~~~~~--------~l~~~r~l~G~~~~~~~~~ 189 (525)
+.+..+++..++++++|+++|| +|||+++..+.++++++++++++++++. .++++|+++|++.|...+.
T Consensus 66 ~~~~~~~~~~~~ig~~~~G~l~Dr-~Grr~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~R~l~G~g~g~~~~~ 144 (432)
T PRK10406 66 AGVFAAGFLMRPIGGWLFGRIADK-HGRKKSMLISVCMMCFGSLVIACLPGYETIGTWAPALLLLARLFQGLSVGGEYGT 144 (432)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHh-cCcHHHHHHHHHHHHHHHHHHhhcCCchhHHHHHHHHHHHHHHHHHhhhhhhHhh
Confidence 4445555566999999999999 9999999999999999999999988864 6899999999999999999
Q ss_pred hheeeEeeecCcchhhHHhHHHHHHHHHHHHHHHHHHhc---------cCCchHHHHHHHHHHHHHHHhHhheeecCCch
Q 041759 190 TIVLLTEKVGTEWRGLVGILDSFFFTIGTLTLPAIAYTN---------RSSSWTIIYLWTSIPTLVYSGLLYIFVSESPR 260 (525)
Q Consensus 190 ~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~l~~~l~~~~---------~~~~wr~~f~~~~~~~~~~~~~~~~~lpesp~ 260 (525)
..+++.|++|+++|+++.++.+.+...|.++++++...+ ..+|||++|++.+++.++.. +....+||+|+
T Consensus 145 ~~~~i~e~~p~~~rg~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~~gWr~~F~i~~~~~ll~~-~~~~~~~e~~~ 223 (432)
T PRK10406 145 SATYMSEVAVEGRKGFYASFQYVTLIGGQLLALLVVVVLQQTLEDAELREWGWRIPFALGAVLAVVAL-WLRRQLDETSQ 223 (432)
T ss_pred HHHHHHHhCCCCcccHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHHHHhccchHHHHHHHHHHHHHHH-HHHhcCCCCch
Confidence 999999999999999999999988888888887664332 25799999999888887765 56666788764
Q ss_pred HhhhcCCHHHHHHHHHhhCCCcCCccchhhhhhhccCCCCcccccccccchhhhhhhhcchhHHHHHHHHHHH-HHHHHH
Q 041759 261 WLFMQGRQEEAVEVIKSLSPIKDSNQLSLSLVSAVSFGHEPAASSKESSFLSSIRELFVRRWALERTLALMVP-GFGIGV 339 (525)
Q Consensus 261 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~-~~~~~~ 339 (525)
+.. + + + . ++ .++++++++++.+...+...+. ......
T Consensus 224 ~~~------~--~------~-~----------------------~~-----~~~~~l~~~~~~~~~~~~~~~~~~~~~~~ 261 (432)
T PRK10406 224 QET------R--A------L-K----------------------EA-----GSLKGLWRNRRAFIMVLGFTAAGSLCFYT 261 (432)
T ss_pred HHH------h--h------h-c----------------------cc-----ccHHHHHhhHHHHHHHHHHHHHHHHHHHH
Confidence 210 0 0 0 0 00 2456677777654433332222 222222
Q ss_pred HHhhhhhcc-cccCChhHHHHHHHHHhcccccccCchhHHHHHHHHHhhcChhHHHHHHHHHHHHHHHHHH-hccccccc
Q 041759 340 VYYGMTLGI-ENLGFDIYLGVVFNALLEIPNLASTIPSFFLTFFLIQKWNRKSSLLVLFIISGICSIMAVV-ANDISNAG 417 (525)
Q Consensus 340 ~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~d~~g~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~ 417 (525)
....+|.++ +..|.+.........+..+ +.+++.++.|+++||++||+.+.++..+..+....+.. .... .+
T Consensus 262 ~~~~lp~~l~~~~g~s~~~~~~~~~i~~~----~~~i~~~~~G~l~Dr~grr~~~~~~~~~~~~~~~~~~~~~~~~--~~ 335 (432)
T PRK10406 262 FTTYMQKYLVNTAGMHANVASGIMTAALF----VFMLIQPLIGALSDKIGRRTSMLCFGSLAALFTVPILSALQNV--SS 335 (432)
T ss_pred HHHHHHHHHHHhcCCCHHHHHHHHHHHHH----HHHHHHHHHHHHHHHcCchHHHHHHHHHHHHHHHHHHHHHHcC--Cc
Confidence 223334444 5578877666665555444 44577788899999999998877766554433332221 1111 11
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHhhhccccCcchhhhhhHHHHHHHHH-HHHHHHHHHhhcc-Cc-hhHHHHHHHHHHHH
Q 041759 418 KRMRIGLELASLFSAYIAYTVIFIYAIELFPTCVRNSATSIMRLAIIF-AAIFSSVLVAAGS-NN-EFVSYGVFGLVIIC 494 (525)
Q Consensus 418 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~r~~~~~~~~~~~~~-g~~~~p~i~~~~~-~~-~~~~~~~~~~~~~~ 494 (525)
....+....+..+..+...+..+.+.+|.+|++.|+++.|+.+...++ .+...|++.+... .+ +...+...+++.++
T Consensus 336 ~~~~~~~~~~~~~~~~~~~~~~~~~~~e~fp~~~r~t~~g~~~~~g~~~~g~~~p~~~~~l~~~g~~~~~~~~~~~~~~i 415 (432)
T PRK10406 336 PYAAFGLVMCALLIVSFYTSISGILKAEMFPAQVRALGVGLSYAVANALFGGSAEYVALSLKSIGMETAFFWYVTLMAVV 415 (432)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCccchhhhHHHHHHHHHHHhHHHHHHHHHHHhCCCcHHHHHHHHHHHH
Confidence 222222223333333444456778889999999999999999987654 3445777666421 12 33344445555555
Q ss_pred HHHHHHhc
Q 041759 495 CGFFVICL 502 (525)
Q Consensus 495 ~~~~~~~~ 502 (525)
+.+..+++
T Consensus 416 ~~~~~~~l 423 (432)
T PRK10406 416 AFLVSLML 423 (432)
T ss_pred HHHHHHHh
Confidence 55544444
No 13
>COG2814 AraJ Arabinose efflux permease [Carbohydrate transport and metabolism]
Probab=100.00 E-value=1.4e-34 Score=271.11 Aligned_cols=368 Identities=16% Similarity=0.111 Sum_probs=304.1
Q ss_pred HHHHHHHHHHHHHHHHHHhhhcccCccccccCCCCCCCCCCCCCCCCCCceecCCCCccccceeeccccccchhhhhhhH
Q 041759 41 QAILVSLASLFDSQQSFISVYTEAEPTWHCLNNTTCSSASNICMFPKSSWAWDGNPTTTALTIISEWGLECSSAFIKGLP 120 (525)
Q Consensus 41 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~c~~~~~~~~~~~~p~~~~~~i~~~~~~~~~s~~~~g~~ 120 (525)
.++.+.++.|..+..-+.+.-. +|++++|+|+ |..+.|++
T Consensus 14 ~l~aLa~~~F~igttEfv~~gL-------------------------------------Lp~iA~dl~v---s~~~aG~l 53 (394)
T COG2814 14 ALLALALAAFAIGTTEFVPVGL-------------------------------------LPPIAADLGV---SEGAAGQL 53 (394)
T ss_pred HHHHHHHHHHHHHhHHHHHHhc-------------------------------------hHHHHHHcCC---CHHHHHHH
Confidence 4777888888888888888888 9999999999 99999999
Q ss_pred HHHHHHHHHHhHHhhHhcccccCCchHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHhhcccchhhhhheeeEeeecC
Q 041759 121 AASHFTGCLLGIVFLATLADSSLGRKNLLFLSCLTMSVATSLTIFSNNLWIYSLLRFFSGISRATIGTCTIVLLTEKVGT 200 (525)
Q Consensus 121 ~s~~~lg~~~~~~~~G~l~dr~~Grk~~~~~~~~~~~i~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~ 200 (525)
.|+|.++..+++++...+.|| +.||++++..+.++.++++++++++||+.++++|++.|+..|..++...++..+..|+
T Consensus 54 is~yAl~~ai~ap~l~~lt~r-~~Rr~lLl~~l~lFi~~n~l~alAp~f~~Ll~aR~~~g~a~G~f~~i~~~~a~~lvpp 132 (394)
T COG2814 54 ITAYALGVALGAPLLALLTGR-LERRRLLLGLLALFIVSNLLSALAPSFAVLLLARALAGLAHGVFWSIAAALAARLVPP 132 (394)
T ss_pred HHHHHHHHHHHHHHHHHHHcc-cchHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCc
Confidence 999999999999999999999 9999999999999999999999999999999999999999999999999999999999
Q ss_pred cchhhHHhHHHHHHHHHHHHHHHHHHhc-cCCchHHHHHHHHHHHHHHHhHhheeecCCchHhhhcCCHHHHHHHHHhhC
Q 041759 201 EWRGLVGILDSFFFTIGTLTLPAIAYTN-RSSSWTIIYLWTSIPTLVYSGLLYIFVSESPRWLFMQGRQEEAVEVIKSLS 279 (525)
Q Consensus 201 ~~r~~~~~~~~~~~~~G~~l~~~l~~~~-~~~~wr~~f~~~~~~~~~~~~~~~~~lpesp~~~~~~~~~~~~~~~~~~~~ 279 (525)
++|++++++...+.+++.++|..+|.++ +.+|||+.|++.+.++++..+..+..+| |+. ..+
T Consensus 133 ~~~~~Aiaiv~~G~tlA~v~GvPLGt~ig~~~GWR~~F~~ia~l~ll~~~~~~~~lP--~~~-----~~~---------- 195 (394)
T COG2814 133 GKRGRALALVFTGLTLATVLGVPLGTFLGQLFGWRATFLAIAVLALLALLLLWKLLP--PSE-----ISG---------- 195 (394)
T ss_pred cchhhHHHHHHHHHHHHHHHhccHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHhCC--Ccc-----CCC----------
Confidence 9999999999999999999999996555 5689999999999999999988888888 210 000
Q ss_pred CCcCCccchhhhhhhccCCCCcccccccccchhhhhhhhcchhHHHHHHHHHHHHHHHHHHHhhh-hhcccccCChhHHH
Q 041759 280 PIKDSNQLSLSLVSAVSFGHEPAASSKESSFLSSIRELFVRRWALERTLALMVPGFGIGVVYYGM-TLGIENLGFDIYLG 358 (525)
Q Consensus 280 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~ 358 (525)
..+. ...+..+++|+|..+..++..++...++...|.++ |+..+..|++....
T Consensus 196 ---~~~~-----------------------~~~~~~~~l~~p~v~~~l~~t~l~~~g~F~~ftYi~P~L~~v~g~s~~~v 249 (394)
T COG2814 196 ---SLPG-----------------------PLRTLLRLLRRPGVLLGLLATFLFMTGHFALYTYIRPFLESVAGFSVSAV 249 (394)
T ss_pred ---CCCc-----------------------chhHHHHHhcCchHHHHHHHHHHHHcchhhhHHhHHHHHHHccCCCHhHH
Confidence 0000 00245678899998888888888887777666555 66666688888888
Q ss_pred HHHHHHhcccccccCchhHHHHHHHHHhhcChhHHHHHHHHHHHHHHHHHHhccccccchhHHHHHHHHHHHHHHHHHHH
Q 041759 359 VVFNALLEIPNLASTIPSFFLTFFLIQKWNRKSSLLVLFIISGICSIMAVVANDISNAGKRMRIGLELASLFSAYIAYTV 438 (525)
Q Consensus 359 ~~~~~~~~~~~~~~~~~~~~~~~~l~d~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 438 (525)
.......++ +.++|..++|++.|| +.|+.+.....+..+..+.+.+.... .....+..++.++........
T Consensus 250 s~~Ll~~Gv----~~~~Gn~~gGrl~dr-~~~~~l~~~~~l~a~~~l~l~~~~~~----~~~~~~~~~~wg~a~~~~~~~ 320 (394)
T COG2814 250 SLVLLAFGI----AGFIGNLLGGRLADR-GPRRALIAALLLLALALLALTFTGAS----PALALALLFLWGFAFSPALQG 320 (394)
T ss_pred HHHHHHHHH----HHHHHHHHHhhhccc-cchhHHHHHHHHHHHHHHHHHHhcch----HHHHHHHHHHHHHHhhhhhhH
Confidence 887777777 888999999999999 88888888888888888887777665 334555555566666665556
Q ss_pred HHhhhccccCcchhhhhhHHHHHHHHHHHHHHHHHHhh--ccCchhHHHHHHHHHHHHHHHHHHhc
Q 041759 439 IFIYAIELFPTCVRNSATSIMRLAIIFAAIFSSVLVAA--GSNNEFVSYGVFGLVIICCGFFVICL 502 (525)
Q Consensus 439 ~~~~~~~~~p~~~r~~~~~~~~~~~~~g~~~~p~i~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~ 502 (525)
......+.. ++.+..+.+++....++|..+|..+.|. +..++....+..+++.+++.++.+..
T Consensus 321 ~~~~~a~~~-p~~~~~a~sl~~aa~nlgia~GA~lGG~v~~~~g~~~~~~~~a~l~~~a~~~~~~~ 385 (394)
T COG2814 321 LQTRLARLA-PDAADLAGSLNVAAFNLGIALGAALGGLVLDALGYAATGWVGAALLLLALLLALLS 385 (394)
T ss_pred HHHHhcccC-CCchHHHHHHHHHHHHHHHHHHHHHHHHHHHhhchHHHHHHHHHHHHHHHHHHHHH
Confidence 666666644 4567999999999999999999999884 44566666777777777666655544
No 14
>TIGR02332 HpaX 4-hydroxyphenylacetate permease. This protein is a part of the Major Facilitator Superfamily (Pfam family pfam07690). Member of this family are found in a number of proteobacterial genomes, but only in the context of having genes for 4-hydroxyphenylacetate (4-HPA) degradation. The protein is characterized by Prieto, et al. (PubMed:9315705) as 4-hydroxyphenylacetate permease in E. coli, where 3-HPA and 3,4-dihydroxyphenylacetate are shown to competitively inhibit 4-HPA transport and therefore also interact specificially.
Probab=100.00 E-value=4.2e-35 Score=290.07 Aligned_cols=387 Identities=13% Similarity=0.130 Sum_probs=269.7
Q ss_pred HHHHHHHHHHHHHHHHHHhhhcccCccccccCCCCCCCCCCCCCCCCCCceecCCCCccccceeeccccccchhhhhhhH
Q 041759 41 QAILVSLASLFDSQQSFISVYTEAEPTWHCLNNTTCSSASNICMFPKSSWAWDGNPTTTALTIISEWGLECSSAFIKGLP 120 (525)
Q Consensus 41 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~c~~~~~~~~~~~~p~~~~~~i~~~~~~~~~s~~~~g~~ 120 (525)
+.++++++++++.+|..+++++ .|.+++|+|+ +..+.|++
T Consensus 9 ~~~~~~~~~~~~~~d~~~~~~~-------------------------------------~~~l~~~~~~---s~~~~g~~ 48 (412)
T TIGR02332 9 LIIFLFILFIFSFLDRINIGFA-------------------------------------GLTMGKDLGL---SATMFGLA 48 (412)
T ss_pred HHHHHHHHHHHHHhhhhhHHHH-------------------------------------HHhhHhhcCC---CHHHHHHH
Confidence 6788888999999999999999 8999999999 99999999
Q ss_pred HHHHHHHHHHhHHhhHhcccccCCchHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHhhcccchhhhhheeeEeeecC
Q 041759 121 AASHFTGCLLGIVFLATLADSSLGRKNLLFLSCLTMSVATSLTIFSNNLWIYSLLRFFSGISRATIGTCTIVLLTEKVGT 200 (525)
Q Consensus 121 ~s~~~lg~~~~~~~~G~l~dr~~Grk~~~~~~~~~~~i~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~ 200 (525)
.+++.+++.+++++.|+++|| +|||+++..++++++++++++++++|++.+++.|+++|++.+...+....++.|++|+
T Consensus 49 ~s~~~~~~~~~~~~~g~l~dr-~G~r~~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~~~~~~~~ 127 (412)
T TIGR02332 49 ATLFYAAYVICGIPSNIMLAI-IGARRWIAGIMVLWGIASTATMFATGPESLYLLRILVGIAEAGFLPGILLYLTFWFPA 127 (412)
T ss_pred HHHHHHHHHHHHhhHHHHHHH-hChHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHhhHHHHHHHHHHHHcCH
Confidence 999999999999999999999 9999999999999999999999999999999999999999999999999999999999
Q ss_pred cchhhHHhHHHHHHHHHHHHHHHHHHhc-------cCCchHHHHHHHHHHHHHHHhHhheeecCCchHhhhcCCHHHHHH
Q 041759 201 EWRGLVGILDSFFFTIGTLTLPAIAYTN-------RSSSWTIIYLWTSIPTLVYSGLLYIFVSESPRWLFMQGRQEEAVE 273 (525)
Q Consensus 201 ~~r~~~~~~~~~~~~~G~~l~~~l~~~~-------~~~~wr~~f~~~~~~~~~~~~~~~~~lpesp~~~~~~~~~~~~~~ 273 (525)
++|++++++++.+.++|.+++++++..+ +..|||+.|++.+++.++..++.++++||+|+.... -+.++.+.
T Consensus 128 ~~rg~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~~~~gwr~~f~~~~~~~l~~~~~~~~~~~~~p~~~~~-l~~~~~~~ 206 (412)
T TIGR02332 128 YFRARANALFMIAMPVTMALGLILSGYILALDGLMALKGWQWLFLLEGFPSVILGVMTWFWLDDSPDKAKW-LDEEDKKA 206 (412)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCCccchhHHHHHHHHHHHHHHHHHhhccCCCcccCCC-CCHHHHHH
Confidence 9999999999999999999999985433 236999999999998887776777888998842100 01111111
Q ss_pred HHHhhCCCcCCccchhhhhhhccCCCCcccccccccchhhhhhhhcchhHHHHHHHHHHHHHHHHHHHhhhhhccccc--
Q 041759 274 VIKSLSPIKDSNQLSLSLVSAVSFGHEPAASSKESSFLSSIRELFVRRWALERTLALMVPGFGIGVVYYGMTLGIENL-- 351 (525)
Q Consensus 274 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-- 351 (525)
..+.. + .++.+.++.. .+.++ + +......+++++ +|.++...+..++...........+|.+++++
T Consensus 207 ~~~~~-~-~~~~~~~~~~----~~~~~-~----~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~~ 274 (412)
T TIGR02332 207 LKEMI-D-NDQLTLEQPE----GAFAH-A----AMPQRSMLREIF-TPAIMLYTLAYFCLTNTLSAINIWTPQILQSFNQ 274 (412)
T ss_pred HHHHH-H-hccccccccc----ccccc-c----cccHHHHHHHhc-ChHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCC
Confidence 11111 0 0000000000 00000 0 000012344555 45545444443433334444445566667664
Q ss_pred CChhHHHHHHHHHhcccccccCchhHHHHHHHHHhhcChhH-HHHHHHHHHHHHHHHHHhccccccchhHHHHHHHHHHH
Q 041759 352 GFDIYLGVVFNALLEIPNLASTIPSFFLTFFLIQKWNRKSS-LLVLFIISGICSIMAVVANDISNAGKRMRIGLELASLF 430 (525)
Q Consensus 352 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~d~~g~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 430 (525)
+.+....+.......+ +.+++.++.++++||+++|+. ......+..++..+ ...... .. .......+..+
T Consensus 275 ~~s~~~~~~~~~~~~l----~~~~g~l~~g~l~dr~~~r~~~~~~~~~~~~~~~~~-~~~~~~---~~-~~~~~~~~~~~ 345 (412)
T TIGR02332 275 GSSNIMIGLLAAIPQF----CTIFGMIWWSRHSDRLKERKHHTALPYLFAAAGWLL-ASATDH---NL-IQLLGIIMASM 345 (412)
T ss_pred CCcHHHhHHHhhHHHH----HHHHHHHHHHHHhcccCccHHHHHHHHHHHHHHHHH-HHhcCC---HH-HHHHHHHHHHH
Confidence 5566666666666666 777999999999999997764 33333333333322 222111 11 22222222233
Q ss_pred HHHHHHHHHHhhhccccCcchhhhhhHHHHHHHHHHHHHHHHHHhhcc--C-chhHHHHHHHH
Q 041759 431 SAYIAYTVIFIYAIELFPTCVRNSATSIMRLAIIFAAIFSSVLVAAGS--N-NEFVSYGVFGL 490 (525)
Q Consensus 431 ~~~~~~~~~~~~~~~~~p~~~r~~~~~~~~~~~~~g~~~~p~i~~~~~--~-~~~~~~~~~~~ 490 (525)
+.....+..+....|.+|++.|+++.|+.+...++|++++|.+.+... . ++...+.++++
T Consensus 346 g~~~~~~~~~~~~~~~~~~~~~~~a~g~~~~~~~~g~~~~p~~~g~i~~~~g~~~~~~~~~~~ 408 (412)
T TIGR02332 346 GSFSAMAIFWTTPDQSISLQARAIAIAVINATGNIGSALSPFLIGILKDATGSFNSGLWFVAA 408 (412)
T ss_pred HhhhhhhHHHhhcccccchHHHHHHHHHHHHhhhhhhhhhhhhcccccccCCCCchhHHHHHH
Confidence 333333445556678899999999999999999999999999998522 2 34555555444
No 15
>TIGR00903 2A0129 major facilitator 4 family protein. This family of proteins are uncharacterized proteins from archaea. This family includes proteins from Archaeoglobus fulgidus and Aeropyrum pernix.
Probab=100.00 E-value=7e-35 Score=282.33 Aligned_cols=347 Identities=11% Similarity=-0.005 Sum_probs=251.8
Q ss_pred ccceeeccccccchhhhhhhHHHHHHHHHHHhHHhhHhcccccCCchHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHH
Q 041759 100 ALTIISEWGLECSSAFIKGLPAASHFTGCLLGIVFLATLADSSLGRKNLLFLSCLTMSVATSLTIFSNNLWIYSLLRFFS 179 (525)
Q Consensus 100 ~~~i~~~~~~~~~s~~~~g~~~s~~~lg~~~~~~~~G~l~dr~~Grk~~~~~~~~~~~i~~~~~~~~~~~~~l~~~r~l~ 179 (525)
+|.+++|||+ +..+.|++.+.+.+++.+++++.|+++|| +|||+++..+......+.+....++|++.++++|+++
T Consensus 14 lp~i~~~~~~---s~~~~g~~~s~~~~g~~i~~~~~G~l~Dr-~grr~~~~~~~~~~~~~~~~~~~~~~~~~l~~~R~l~ 89 (368)
T TIGR00903 14 LSLVAEDIDV---SKEELGLLAITYPAAFLALTIPSGLLLDR-AFKRWFLFGSLATFAAAAGRLLDPFNYEWLLACQLLA 89 (368)
T ss_pred HHHHHHHhCc---CHHHHHHHHHHHHHHHHHHHHHHHHHHHH-ccchHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHH
Confidence 8999999999 99999999999999999999999999999 9999987666555555443333447999999999999
Q ss_pred hhcccchhhhhheeeEeeecCcchhhHHhHHHHHHHHHHHHHHHHH-HhccCCchHHHHHHHHHHHHHHHhHhheeecCC
Q 041759 180 GISRATIGTCTIVLLTEKVGTEWRGLVGILDSFFFTIGTLTLPAIA-YTNRSSSWTIIYLWTSIPTLVYSGLLYIFVSES 258 (525)
Q Consensus 180 G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~l~~~l~-~~~~~~~wr~~f~~~~~~~~~~~~~~~~~lpes 258 (525)
|++.+. .+.....++|++|+++|++++++.+.+..+|.+++++++ .+.+..|||+.|++.+++.++..++.++++||+
T Consensus 90 G~g~~~-~~~~~~~~~~~~~~~~r~~a~~~~~~~~~lG~~l~~~~~~~l~~~~gWr~~f~~~~~l~~~~~~~~~~~lp~~ 168 (368)
T TIGR00903 90 ALGQPF-LLNAFAPAASQIREERRDLVISLLSFAMYLGIIFALAAGLKIYTAGGLQLLIIPIAAVAAAGIILVLAALPAL 168 (368)
T ss_pred HhHhHH-HHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccchHHHHHHHHHHHHHHHHHHHHHcCCC
Confidence 999986 455556669999999999999999999999999999884 455678999999998888887776777889998
Q ss_pred chHhhhcCCHHHHHHHHHhhCCCcCCccchhhhhhhccCCCCcccccccccchhhhhhhhcchhHHHHHHHHHHHHHHHH
Q 041759 259 PRWLFMQGRQEEAVEVIKSLSPIKDSNQLSLSLVSAVSFGHEPAASSKESSFLSSIRELFVRRWALERTLALMVPGFGIG 338 (525)
Q Consensus 259 p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~ 338 (525)
|++.. +..+.+ +. ..++++++++|.++...+..++......
T Consensus 169 p~~~~---~~~~~~----~~--------------------------------~~~~~~ll~~~~~~~~~~~~~~~~~~~~ 209 (368)
T TIGR00903 169 PFQAA---EGFGFK----DA--------------------------------VKEFGALAGRKDLWIIGAILGFGVALFD 209 (368)
T ss_pred CCCCC---CCcchH----HH--------------------------------HHHHHHHHcChhHHHHHHHHHHHHHHHH
Confidence 75310 000000 00 0246778899887776666655555554
Q ss_pred HHHhhhhhcccccCChhHHHHHHHHHhcccccccCchhHHHHHHHHHhhcCh---hHHH-HHHHHHHHHHHHHHHhcccc
Q 041759 339 VVYYGMTLGIENLGFDIYLGVVFNALLEIPNLASTIPSFFLTFFLIQKWNRK---SSLL-VLFIISGICSIMAVVANDIS 414 (525)
Q Consensus 339 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~d~~g~~---~~~~-~~~~~~~~~~~~~~~~~~~~ 414 (525)
.....+|.++++.|++.. .+....+..+ .+.+..+++.||..|| +... ....+.++....+....+.
T Consensus 210 ~~~~wlp~~L~~~g~s~~-~~~~~~l~~~-------~g~~g~~~~~d~~~r~~~r~~~~~~~~~~~a~~~~~~~~~~~~- 280 (368)
T TIGR00903 210 NLAIWLEAALRPAGLEDI-AGDAVALAIL-------AGLIGVAVIPDRVARAGLRSIYIRAAALLIAAFFLALAFELNR- 280 (368)
T ss_pred HHHHHHHHHHHHCCCChH-HHHHHHHHHH-------HHHHHHHHhhHHhhhhhhHHHHHHHHHHHHHHHHHHHHHcccc-
Confidence 444556666677777654 4444444444 4555567888887543 3322 2333333333333322222
Q ss_pred ccchhHHHHHHHHHHHHHHHHHHHHHhhhccccCcchhhhhhHHHHHHHHHHHHHHHHHHhhccCchhHHHHHHHHHHHH
Q 041759 415 NAGKRMRIGLELASLFSAYIAYTVIFIYAIELFPTCVRNSATSIMRLAIIFAAIFSSVLVAAGSNNEFVSYGVFGLVIIC 494 (525)
Q Consensus 415 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~r~~~~~~~~~~~~~g~~~~p~i~~~~~~~~~~~~~~~~~~~~~ 494 (525)
+ ..+.+..+.+++....++..+++.+|.+|++.|+++.|+.+..+++|++++|.+.+....+....|.++++..++
T Consensus 281 ---~-~~~~~~~l~~~~~~~~~~~~~~~~~~~~p~~~rgt~~G~~~~~g~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~i 356 (368)
T TIGR00903 281 ---L-ALFAFIGIAGLLMLPAYAIIMDWIGKFCDKELHGKAAGAIGFTSRAISVALALAAMLFISSAEAYFTFLAILITI 356 (368)
T ss_pred ---H-HHHHHHHHHHHhhhhhHHHHHHHHHHhcchhhcCcccchhhHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHH
Confidence 2 334455556666677777888999999999999999999999999999999988874333566777777777777
Q ss_pred HHHHHHhcc
Q 041759 495 CGFFVICLP 503 (525)
Q Consensus 495 ~~~~~~~~~ 503 (525)
+.+..+.++
T Consensus 357 ~~~~~~~~~ 365 (368)
T TIGR00903 357 AFAIALLLP 365 (368)
T ss_pred HHHHHHhCC
Confidence 766654433
No 16
>PRK11551 putative 3-hydroxyphenylpropionic transporter MhpT; Provisional
Probab=100.00 E-value=7.8e-34 Score=282.04 Aligned_cols=373 Identities=17% Similarity=0.155 Sum_probs=280.8
Q ss_pred HHHHHHHHHHHHHHHHHHhhhcccCccccccCCCCCCCCCCCCCCCCCCceecCCCCccccceeeccccccchhhhhhhH
Q 041759 41 QAILVSLASLFDSQQSFISVYTEAEPTWHCLNNTTCSSASNICMFPKSSWAWDGNPTTTALTIISEWGLECSSAFIKGLP 120 (525)
Q Consensus 41 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~c~~~~~~~~~~~~p~~~~~~i~~~~~~~~~s~~~~g~~ 120 (525)
+..+..+..+.+++|....+.. .|.+.+++|+ ++.+.|++
T Consensus 16 ~~~~~~~~~~~~~~~~~~~~~~-------------------------------------~~~~~~~~~~---s~~~~g~~ 55 (406)
T PRK11551 16 TIGLCFLVALLEGLDLQSAGVA-------------------------------------APRMAQEFGL---DVAQMGWA 55 (406)
T ss_pred HHHHHHHHHHHHHHHHHHHHHH-------------------------------------HHHHHHHhCC---CHHHHHHH
Confidence 6777778888999999988888 8999999999 99999999
Q ss_pred HHHHHHHHHHhHHhhHhcccccCCchHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHhhcccchhhhhheeeEeeecC
Q 041759 121 AASHFTGCLLGIVFLATLADSSLGRKNLLFLSCLTMSVATSLTIFSNNLWIYSLLRFFSGISRATIGTCTIVLLTEKVGT 200 (525)
Q Consensus 121 ~s~~~lg~~~~~~~~G~l~dr~~Grk~~~~~~~~~~~i~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~ 200 (525)
.+++.++..+++++.|+++|| +|||+++..+.++.+++.++++++++++.+++.|++.|++.+...+...+++.|++|+
T Consensus 56 ~~~~~~~~~~~~~~~g~l~dr-~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~G~~~~~~~~~~~~~~~~~~~~ 134 (406)
T PRK11551 56 FSAGILGLLPGALLGGRLADR-IGRKRILIVSVALFGLFSLATAQAWDFPSLLVARLLTGVGLGGALPNLIALTSEAVGP 134 (406)
T ss_pred HHHHHHHHHHHHHHHHHHHHH-hCCchhHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHhhHHHHHHHHHHHHHHHcCH
Confidence 999999999999999999999 9999999999999999999999999999999999999999999999999999999999
Q ss_pred cchhhHHhHHHHHHHHHHHHHHHHH-HhccCCchHHHHHHHHHHHHHHHhHhheeecCCchHhhhcCCHHHHHHHHHhhC
Q 041759 201 EWRGLVGILDSFFFTIGTLTLPAIA-YTNRSSSWTIIYLWTSIPTLVYSGLLYIFVSESPRWLFMQGRQEEAVEVIKSLS 279 (525)
Q Consensus 201 ~~r~~~~~~~~~~~~~G~~l~~~l~-~~~~~~~wr~~f~~~~~~~~~~~~~~~~~lpesp~~~~~~~~~~~~~~~~~~~~ 279 (525)
++|++++++.+.+..+|..+++.++ .+....+||+.|++.++..++..++...++||+|++...+++.++.+
T Consensus 135 ~~r~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~------- 207 (406)
T PRK11551 135 RLRGTAVSLMYCGVPFGGALASVIGVLAAGDAAWRHIFYVGGVGPLLLVPLLMRWLPESRAFAQAAGAGKQRA------- 207 (406)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHccccCHHHHHHHHHHHHHHHHHHHHHhCCCChhHHhccCcchhhh-------
Confidence 9999999999999999999999885 45566799999999887776666456667898775422111100000
Q ss_pred CCcCCccchhhhhhhccCCCCcccccccccchhhhhhhhcch---hHHHHHHHHHHHHHHHHHHHhhhhhcccccCChhH
Q 041759 280 PIKDSNQLSLSLVSAVSFGHEPAASSKESSFLSSIRELFVRR---WALERTLALMVPGFGIGVVYYGMTLGIENLGFDIY 356 (525)
Q Consensus 280 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 356 (525)
...+..++++ ..+......+.............|.+.++.|.+..
T Consensus 208 --------------------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~g~s~~ 255 (406)
T PRK11551 208 --------------------------------PVLRALFGEGRATATLLLWISYFFTLIVLYFLLNWLPSLLVGQGLSRS 255 (406)
T ss_pred --------------------------------hhHHHHhhhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCChh
Confidence 0011111111 11111111111122222333345666777888887
Q ss_pred HHHHHHHHhcccccccCchhHHHHHHHHHhhcChhHHHHHHHHHHHHHHHHHHhccccccchhHHHHHHHHHHHHHHHHH
Q 041759 357 LGVVFNALLEIPNLASTIPSFFLTFFLIQKWNRKSSLLVLFIISGICSIMAVVANDISNAGKRMRIGLELASLFSAYIAY 436 (525)
Q Consensus 357 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~d~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 436 (525)
..+...+...+ +.+++.++.+++.||++||+.+..+.....++.+++....+. ....+..++.+++.....
T Consensus 256 ~~~~~~~~~~~----~~~~~~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~g~~~~~~~ 326 (406)
T PRK11551 256 QAGLVQIAFNI----GGALGSLLIGALMDRLRPRRVVLLIYAGILASLAALAAAPSF-----AGMLLAGFAAGLFVVGGQ 326 (406)
T ss_pred hhhHHHHHHHH----HHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHhcCcH-----HHHHHHHHHHHHHHHhHH
Confidence 77777777666 777999999999999999998888766666665555443322 234455566666666777
Q ss_pred HHHHhhhccccCcchhhhhhHHHHHHHHHHHHHHHHHHhhcc-C--chhHHHHHHHHHHHHHHHHHHhc
Q 041759 437 TVIFIYAIELFPTCVRNSATSIMRLAIIFAAIFSSVLVAAGS-N--NEFVSYGVFGLVIICCGFFVICL 502 (525)
Q Consensus 437 ~~~~~~~~~~~p~~~r~~~~~~~~~~~~~g~~~~p~i~~~~~-~--~~~~~~~~~~~~~~~~~~~~~~~ 502 (525)
+...++..|.+|++.|+++.|+.+....+|..++|.+.|... . +....+...+.+.+++.++.+.+
T Consensus 327 ~~~~~~~~~~~p~~~~g~~~g~~~~~~~~g~~~g~~~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 395 (406)
T PRK11551 327 SVLYALAPLFYPTQVRGTGVGAAVAVGRLGSMAGPLLAGQLLALGRSTVGVIGASIPVILVAALAALLL 395 (406)
T ss_pred HHHHHHHHHHcchhhhhhhhhHHHHhhhHHHHHHhhhHhhhhccCCchHHHHHHHHHHHHHHHHHHHHH
Confidence 888899999999999999999999999999999999999532 1 23334444444444444444444
No 17
>PRK11663 regulatory protein UhpC; Provisional
Probab=100.00 E-value=7.9e-34 Score=283.36 Aligned_cols=390 Identities=13% Similarity=0.060 Sum_probs=271.5
Q ss_pred HHHHHHHHHHHHHHHHHHhhhcccCccccccCCCCCCCCCCCCCCCCCCceecCCCCccccceeeccccccchhhhhhhH
Q 041759 41 QAILVSLASLFDSQQSFISVYTEAEPTWHCLNNTTCSSASNICMFPKSSWAWDGNPTTTALTIISEWGLECSSAFIKGLP 120 (525)
Q Consensus 41 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~c~~~~~~~~~~~~p~~~~~~i~~~~~~~~~s~~~~g~~ 120 (525)
+.....++++...++....+.. .|.+.+++|+ +..+.|++
T Consensus 24 ~~~~~~~~~~~~~~~~~~~~~~-------------------------------------~~~~~~~~g~---s~~~~g~~ 63 (434)
T PRK11663 24 ILITMYLGYALFYFTRKSFNAA-------------------------------------MPEMLADLGL---SRSDIGLL 63 (434)
T ss_pred HHHHHHHHHHHHHHhhhhHHHh-------------------------------------hHHHHHhcCC---CHHHHHHH
Confidence 5666777888888888877777 8999999999 99999999
Q ss_pred HHHHHHHHHHhHHhhHhcccccCCchHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHhhcccchhhhhheeeEeeecC
Q 041759 121 AASHFTGCLLGIVFLATLADSSLGRKNLLFLSCLTMSVATSLTIFSNNLWIYSLLRFFSGISRATIGTCTIVLLTEKVGT 200 (525)
Q Consensus 121 ~s~~~lg~~~~~~~~G~l~dr~~Grk~~~~~~~~~~~i~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~ 200 (525)
.+.+.+++.+++++.|+++|| +|||+++.++.++.+++.++.+++++++.+++.|++.|++.|...+...+++.|++|+
T Consensus 64 ~~~~~~~~~~~~~~~G~l~dr-~g~r~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~g~~~g~~~~~~~~~~~~~~~~ 142 (434)
T PRK11663 64 ATLFYITYGVSKFVSGIVSDR-SNARYFMGIGLIATGIINILFGFSSSLWAFALLWVLNAFFQGWGWPVCAKLLTAWYSR 142 (434)
T ss_pred HHHHHHHHHHHHhhhhHHHhh-cCCchhHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHccchHHHHHHHHhCCH
Confidence 999999999999999999999 9999999999999999999999999999999999999999999899999999999999
Q ss_pred cchhhHHhHHHHHHHHHHHHHHHH-HHhccCCchHHHHHHHHHHHHHHHhHhheeecCCchHhhhcCCHHHHHHHHHhhC
Q 041759 201 EWRGLVGILDSFFFTIGTLTLPAI-AYTNRSSSWTIIYLWTSIPTLVYSGLLYIFVSESPRWLFMQGRQEEAVEVIKSLS 279 (525)
Q Consensus 201 ~~r~~~~~~~~~~~~~G~~l~~~l-~~~~~~~~wr~~f~~~~~~~~~~~~~~~~~lpesp~~~~~~~~~~~~~~~~~~~~ 279 (525)
++|++++++.+.+.++|.++++.+ +.+...++||+.|++.+++.++..++..+++||+|++...+...+.
T Consensus 143 ~~rg~~~~~~~~~~~~g~~~~~~~~~~l~~~~gw~~~f~~~~i~~~~~~~~~~~~~~~~p~~~~~~~~~~~--------- 213 (434)
T PRK11663 143 TERGGWWAIWNTAHNVGGALIPLVVGAIALHYGWRYGMMIAGIIAIVVGLFLCWRLRDKPQAMGLPSVGEW--------- 213 (434)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHHcCCCHhhcCCCCcccc---------
Confidence 999999999999999999999987 5666778999999998888776654555667887643210000000
Q ss_pred CCcCCccchhhhhhhccCCCCcccccccccchhhh-hhhhcchhHHHHHHHHHHHHHHHHHHHhhhhhcc-cccCChhHH
Q 041759 280 PIKDSNQLSLSLVSAVSFGHEPAASSKESSFLSSI-RELFVRRWALERTLALMVPGFGIGVVYYGMTLGI-ENLGFDIYL 357 (525)
Q Consensus 280 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~ 357 (525)
.++ ..+..++.+. ++.+....+ ...++++.++...+..+.............|.++ +++|.+...
T Consensus 214 --~~~------~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~g~s~~~ 280 (434)
T PRK11663 214 --RHD------ALELAQQQEG-----AGLSRKEILTKYVLLNPYIWLLSFSYVLVYVVRAAINDWGNLYMSETLGVDLVT 280 (434)
T ss_pred --ccc------ccccchhccc-----cCCChhhhHHHHHhcChHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCHHH
Confidence 000 0000000000 000000112 1356677655554444433333333333445555 567888888
Q ss_pred HHHHHHHhcccccccCchhHHHHHHHHHhh--cChhHH-HHHHHHHHHHHHHHHHhccccccchhHHHHHHHHHHHHHHH
Q 041759 358 GVVFNALLEIPNLASTIPSFFLTFFLIQKW--NRKSSL-LVLFIISGICSIMAVVANDISNAGKRMRIGLELASLFSAYI 434 (525)
Q Consensus 358 ~~~~~~~~~~~~~~~~~~~~~~~~~l~d~~--g~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 434 (525)
.+...+...+ +.+++.++.|++.||+ ++|+.. ........+....+...... +........+..+++...
T Consensus 281 a~~~~~~~~~----~~~~g~~~~g~l~dr~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~g~~~~~ 353 (434)
T PRK11663 281 ANSAVSMFEL----GGFIGALVAGWGSDKLFNGNRGPMNLIFAAGILLSVGSLWLMPFA---SYVMQAACFFTIGFFVFG 353 (434)
T ss_pred HHHHHHHHHH----HHHHHHHHHhhhHHHhccCCccHHHHHHHHHHHHHHHHHHHcccc---cHHHHHHHHHHHHHHHhh
Confidence 8877777777 7779999999999998 333332 22222222222222222222 122222222223332222
Q ss_pred HHHHHHhhhccccCcchhhhhhHHHHHHHHHHHHHHHHHHhh--ccCchhHHHHHHHHHHHHHHHHHH
Q 041759 435 AYTVIFIYAIELFPTCVRNSATSIMRLAIIFAAIFSSVLVAA--GSNNEFVSYGVFGLVIICCGFFVI 500 (525)
Q Consensus 435 ~~~~~~~~~~~~~p~~~r~~~~~~~~~~~~~g~~~~p~i~~~--~~~~~~~~~~~~~~~~~~~~~~~~ 500 (525)
..........|.+|++.|+++.|+.+...++|..++|.+.|. +..++...|...+++.+++.+..+
T Consensus 354 ~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~~p~~~g~l~~~~g~~~~f~~~~~~~~~~~~~~~ 421 (434)
T PRK11663 354 PQMLIGMAAAECSHKEAAGAATGFVGLFAYLGAALSGYPLAKVLEIWHWTGFFVVISIAAGISALLLL 421 (434)
T ss_pred HHHHHHHHHHhcccHhhHHhHHHHHHHHHHHHHHHhcccHHHHHHhcccHHHHHHHHHHHHHHHHHHH
Confidence 223344567899999999999999999999999999999885 334566777777777766655443
No 18
>PRK03545 putative arabinose transporter; Provisional
Probab=100.00 E-value=1.1e-33 Score=278.98 Aligned_cols=344 Identities=13% Similarity=0.016 Sum_probs=261.5
Q ss_pred ccceeeccccccchhhhhhhHHHHHHHHHHHhHHhhHhcccccCCchHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHH
Q 041759 100 ALTIISEWGLECSSAFIKGLPAASHFTGCLLGIVFLATLADSSLGRKNLLFLSCLTMSVATSLTIFSNNLWIYSLLRFFS 179 (525)
Q Consensus 100 ~~~i~~~~~~~~~s~~~~g~~~s~~~lg~~~~~~~~G~l~dr~~Grk~~~~~~~~~~~i~~~~~~~~~~~~~l~~~r~l~ 179 (525)
+|.+++|+|+ ++.+.|++.+.+.+++.+++++.|+++|| +|||+++..+.++.+++++++++++|++.++++|+++
T Consensus 32 ~~~l~~~~~~---s~~~~g~~~~~~~~~~~~~~~~~g~l~dr-~g~r~~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~~~ 107 (390)
T PRK03545 32 LSDIAQSFHM---QTAQVGLMLTIYAWVVALMSLPLMLLTSN-VERRKLLIGLFVLFIASHVLSALAWNFTVLLISRIGI 107 (390)
T ss_pred hHHHHhHcCC---CHHHHHHHHHHHHHHHHHHHHHHHHHHcC-CChHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHH
Confidence 7899999999 99999999999999999999999999999 9999999999999999999999999999999999999
Q ss_pred hhcccchhhhhheeeEeeecCcchhhHHhHHHHHHHHHHHHHHHHHH-hccCCchHHHHHHHHHHHHHHHhHhheeecCC
Q 041759 180 GISRATIGTCTIVLLTEKVGTEWRGLVGILDSFFFTIGTLTLPAIAY-TNRSSSWTIIYLWTSIPTLVYSGLLYIFVSES 258 (525)
Q Consensus 180 G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~l~~~l~~-~~~~~~wr~~f~~~~~~~~~~~~~~~~~lpes 258 (525)
|++.+...+...+++.|++|+++|++++++...+.++|.+++|+++. +.+..|||+.|++.+++.++..+..+..+||.
T Consensus 108 G~~~~~~~~~~~~~i~~~~~~~~r~~~~g~~~~~~~~g~~ig~~l~~~l~~~~gw~~~f~~~~~~~~l~~~~~~~~~~~~ 187 (390)
T PRK03545 108 AFAHAIFWSITASLAIRVAPAGKKAQALSLLATGTALAMVLGLPLGRVIGQYLGWRTTFLAIGGGALITLLLLIKLLPLL 187 (390)
T ss_pred HHHHHHHHHHHHHHHHHhCChhhhhhHHHHHHHHHHHHHHHHhhHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHhCCCC
Confidence 99999888999999999999999999999999999999999999854 45667999999999988877764555556664
Q ss_pred chHhhhcCCHHHHHHHHHhhCCCcCCccchhhhhhhccCCCCcccccccccchhhhhhhhcchhHHHHHHHHHHHHHHHH
Q 041759 259 PRWLFMQGRQEEAVEVIKSLSPIKDSNQLSLSLVSAVSFGHEPAASSKESSFLSSIRELFVRRWALERTLALMVPGFGIG 338 (525)
Q Consensus 259 p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~ 338 (525)
|+ + +.++ ..+.++++++|.++......++......
T Consensus 188 ~~----~-~~~~----------------------------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 222 (390)
T PRK03545 188 PS----E-HSGS----------------------------------------LKSLPLLFRRPALVSLYLLTVVVVTAHF 222 (390)
T ss_pred CC----C-Ccch----------------------------------------HHHHHHHHhCcHHHHHHHHHHHHHHHHH
Confidence 31 0 0000 0244567788876655444443333332
Q ss_pred H-HHhhhhhcccccCChhHHHHHHHHHhcccccccCchhHHHHHHHHHhhcChhHHHHHHHHHHHHHHHHHHhccccccc
Q 041759 339 V-VYYGMTLGIENLGFDIYLGVVFNALLEIPNLASTIPSFFLTFFLIQKWNRKSSLLVLFIISGICSIMAVVANDISNAG 417 (525)
Q Consensus 339 ~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~d~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 417 (525)
. ..+..+++.+..|.+....+.......+ +.+++.++.+++.||+++|... .+..+..++...+......
T Consensus 223 ~~~~~~~~~l~~~~g~s~~~~~~~~~~~~~----~~~~g~~~~g~l~dr~~~~~~~-~~~~~~~~~~~~l~~~~~~---- 293 (390)
T PRK03545 223 TAYSYIEPFVQQVAGLSENFATLLLLLFGG----AGIIGSVLFSRLGNRHPSGFLL-IAIALLLVCLLLLLPAANS---- 293 (390)
T ss_pred HHHHHHHHHHHHhcCCCccHHHHHHHHHHH----HHHHHHHHHHHHhhccchhHHH-HHHHHHHHHHHHHHHHhch----
Confidence 2 2333445445578887777777666666 6779999999999999987644 4444444444333222222
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHhhhccccCcchhhhhhHHHHHHHHHHHHHHHHHHhh--ccCchhHHHHHHHHHHHHH
Q 041759 418 KRMRIGLELASLFSAYIAYTVIFIYAIELFPTCVRNSATSIMRLAIIFAAIFSSVLVAA--GSNNEFVSYGVFGLVIICC 495 (525)
Q Consensus 418 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~r~~~~~~~~~~~~~g~~~~p~i~~~--~~~~~~~~~~~~~~~~~~~ 495 (525)
.....+..++.+++.....+.....+.+..| +.|++++|+.+....+|..++|.+.|. +..+....+...+++.+++
T Consensus 294 ~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~-~~~~~~~g~~~~~~~~g~~~G~~~~G~~~~~~g~~~~~~~~~~~~~~~ 372 (390)
T PRK03545 294 EWHLSVLSIFWGIAIMCIGLAMQVKVLKLAP-DATDVAMALFSGIFNIGIGAGALLGNQVSLHLGLSSIGYVGAALALAA 372 (390)
T ss_pred HHHHHHHHHHHHHHHhcchHHHHHHHHHhCC-CcHHHHHHHHHHHHHHHHHHHHHHHHHHHhccChhHHHHHHHHHHHHH
Confidence 2344556666666665555666677778777 578999999999999999999999985 4456777777777777776
Q ss_pred HHHHHhc
Q 041759 496 GFFVICL 502 (525)
Q Consensus 496 ~~~~~~~ 502 (525)
.+.....
T Consensus 373 ~~~~~~~ 379 (390)
T PRK03545 373 LVWSILI 379 (390)
T ss_pred HHHHHHH
Confidence 6655443
No 19
>PRK09952 shikimate transporter; Provisional
Probab=100.00 E-value=2.2e-33 Score=280.12 Aligned_cols=387 Identities=17% Similarity=0.130 Sum_probs=261.8
Q ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHhhhcccCccccccCCCCCCCCCCCCCCCCCCceecCCCCcccc-ceeecc--ccc
Q 041759 34 SLDEIVEQAILVSLASLFDSQQSFISVYTEAEPTWHCLNNTTCSSASNICMFPKSSWAWDGNPTTTAL-TIISEW--GLE 110 (525)
Q Consensus 34 ~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~c~~~~~~~~~~~~p~~~~~-~i~~~~--~~~ 110 (525)
......+......++++++.+|....++. .| .+.+++ ++
T Consensus 16 ~~~~~~~~~~~~~~~~~~~~~d~~~~~~~-------------------------------------~~~~~~~~~~~~~- 57 (438)
T PRK09952 16 SLSRARRAALGSFAGAVVDWYDFLLYGIT-------------------------------------AALVFNREFFPQV- 57 (438)
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHHH-------------------------------------HHHHHHHhcCCCC-
Confidence 34444457888888999999999998887 44 344554 45
Q ss_pred cchhhhhhhHH-----HHHHHHHHHhHHhhHhcccccCCchHHHHHHHHHHHHHHHHHHhhhhHH--------HHHHHHH
Q 041759 111 CSSAFIKGLPA-----ASHFTGCLLGIVFLATLADSSLGRKNLLFLSCLTMSVATSLTIFSNNLW--------IYSLLRF 177 (525)
Q Consensus 111 ~~s~~~~g~~~-----s~~~lg~~~~~~~~G~l~dr~~Grk~~~~~~~~~~~i~~~~~~~~~~~~--------~l~~~r~ 177 (525)
++. .+++. ++.+++..+++++.|+++|| +|||++++++.+++++++++++++++++ .++++|+
T Consensus 58 --~~~-~~~~~~~~~~~~~~~~~~~g~~~~G~l~Dr-~Grr~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~R~ 133 (438)
T PRK09952 58 --SPA-MGTLAAFATFGVGFLFRPLGGVVFGHFGDR-LGRKRMLMLTVWMMGIATALIGLLPSFSTIGWWAPVLLVTLRA 133 (438)
T ss_pred --CcH-HHHHHHHHHHHHHHHHHhhHHHHHHHHHHh-hccHHHHHHHHHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHH
Confidence 444 35443 35567788999999999999 9999999999999999999999999987 5889999
Q ss_pred HHhhcccchhhhhheeeEeeecCcchhhHHhHHHHHHHHHHHHHHHHHHhc---------cCCchHHHHHHHHHHHHHHH
Q 041759 178 FSGISRATIGTCTIVLLTEKVGTEWRGLVGILDSFFFTIGTLTLPAIAYTN---------RSSSWTIIYLWTSIPTLVYS 248 (525)
Q Consensus 178 l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~l~~~l~~~~---------~~~~wr~~f~~~~~~~~~~~ 248 (525)
++|++.|...+....++.|++|+++|++..+..+.+..+|.+++..+...+ ..+|||++|++.+++.++..
T Consensus 134 l~G~~~g~~~~~~~~~~~e~~p~~~rg~~~~~~~~g~~~G~~l~~~~~~~l~~~~~~~~~~~~gWr~~f~~~~~~~l~~~ 213 (438)
T PRK09952 134 IQGFAVGGEWGGAALLAVESAPKNKKAFYSSGVQVGYGVGLLLSTGLVSLISMMTTDEQFLSWGWRIPFLFSIVLVLIAL 213 (438)
T ss_pred HHHhhhcccHHHHHHHHHHhCCCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHHHhhccChHHHHHHHHHHHHHHH
Confidence 999999999999999999999999999999999999999999987663322 25799999999888776544
Q ss_pred hHhheeecCCchHhhhcCCHHHHHHHHHhhCCCcCCccchhhhhhhccCCCCcccccccccchhhhhhhhcchhHHHHHH
Q 041759 249 GLLYIFVSESPRWLFMQGRQEEAVEVIKSLSPIKDSNQLSLSLVSAVSFGHEPAASSKESSFLSSIRELFVRRWALERTL 328 (525)
Q Consensus 249 ~~~~~~lpesp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~ 328 (525)
.....+||+|+|...+++.++ . ++ + ....+.++++|+.+...+
T Consensus 214 -~l~~~~~es~~~~~~~~~~~~-----------~-~~--------------------~----~~~~~~l~~~~~~~~~~~ 256 (438)
T PRK09952 214 -WVRNGMEESAEFEQQQHEQAA-----------A-KK--------------------R----IPVIEALLRHPGAFLKII 256 (438)
T ss_pred -HHHHhCCCChhHHHHHhhccc-----------c-cc--------------------c----CCHHHHHHHchHHHHHHH
Confidence 555667888765322111000 0 00 0 011223455555444332
Q ss_pred HHHH-HHHHHH-HHHhhhhhcccccCChhHHHHHHHHHhcccccccCchhHHHHHHHHHhhcChhHHHHHHHHHHHHHHH
Q 041759 329 ALMV-PGFGIG-VVYYGMTLGIENLGFDIYLGVVFNALLEIPNLASTIPSFFLTFFLIQKWNRKSSLLVLFIISGICSIM 406 (525)
Q Consensus 329 ~~~~-~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~d~~g~~~~~~~~~~~~~~~~~~ 406 (525)
...+ ..+... ...+..++..+..|.+.........+..+ ..+++.++.|+++||+|||+.+..+.++..++.+.
T Consensus 257 ~~~~~~~~~~~~~~~~~~~y~~~~~g~s~~~~~~~~~~~g~----~~~i~~~~~g~l~Dr~grr~~~~~~~~~~~~~~~~ 332 (438)
T PRK09952 257 ALRLCELLTMYIVTAFALNYSTQNLGLPRELFLNIGLLVGG----LSCLTIPCFAWLADRFGRRRVYITGALIGTLSAFP 332 (438)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHH----HHHHHHHHHHHHHHHhCchHHHHHHHHHHHHHHHH
Confidence 2221 122222 22233333334567665533222222233 34478889999999999999888777665554433
Q ss_pred HHHhccccccchhHHHHHHHHHHHHHHHHHHHHHhhhccccCcchhhhhhHHHHHHH-HHHHHHHHHHHhhc---c-Cch
Q 041759 407 AVVANDISNAGKRMRIGLELASLFSAYIAYTVIFIYAIELFPTCVRNSATSIMRLAI-IFAAIFSSVLVAAG---S-NNE 481 (525)
Q Consensus 407 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~r~~~~~~~~~~~-~~g~~~~p~i~~~~---~-~~~ 481 (525)
+...... .......+...++.+++.+...+..+++..|.+|++.|+++.++.+... .+|+.++|.+.+.. . .++
T Consensus 333 ~~~~~~~-~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~e~~p~~~r~tg~g~~~~~~~~lgg~~~p~i~g~l~~~~~~~~ 411 (438)
T PRK09952 333 FFMALEA-QSIFWIVFFSIMLANIAHDMVVCVQQPMFTEMFGASYRYSGAGVGYQVASVVGGGFTPFIAAALVTYFGGSW 411 (438)
T ss_pred HHHHHHc-CChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCcchhHHHHhHHHHHHHHHHHHHHHHHHHHHHHhcCCCc
Confidence 3222111 0112233344455566667777888899999999999999999977665 48889999998852 1 234
Q ss_pred hHHHHHHHHHHHHHHHHHHhccC
Q 041759 482 FVSYGVFGLVIICCGFFVICLPE 504 (525)
Q Consensus 482 ~~~~~~~~~~~~~~~~~~~~~~~ 504 (525)
...+...+++.+++.+..+.+++
T Consensus 412 ~~~~~~~~~~~~i~~v~~~~~~~ 434 (438)
T PRK09952 412 HSVAIYLLAGCLISAMTALLMKD 434 (438)
T ss_pred hHHHHHHHHHHHHHHHHHHHccc
Confidence 45566666666666666666655
No 20
>KOG0254 consensus Predicted transporter (major facilitator superfamily) [General function prediction only]
Probab=100.00 E-value=6.3e-34 Score=289.22 Aligned_cols=390 Identities=22% Similarity=0.292 Sum_probs=284.8
Q ss_pred hhhhhHHHHHHHHHHHhHHhhHhcccccCCchHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHhhcccchhhhhheee
Q 041759 115 FIKGLPAASHFTGCLLGIVFLATLADSSLGRKNLLFLSCLTMSVATSLTIFSNNLWIYSLLRFFSGISRATIGTCTIVLL 194 (525)
Q Consensus 115 ~~~g~~~s~~~lg~~~~~~~~G~l~dr~~Grk~~~~~~~~~~~i~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~i 194 (525)
.+.+++.+++.++.+++++++|+++|+ +|||+.++++.+++.++.+++++++|+++++++|+++|+|.|....+.+.|+
T Consensus 89 ~~~s~~~s~~~lga~~g~l~~g~l~d~-~GRk~~l~~~~~~~~iG~ii~~~a~~~~~l~~GR~l~G~g~G~~~~~~piy~ 167 (513)
T KOG0254|consen 89 VRQGLLTSILNLGALVGSLLAGRLGDR-IGRKKTLLLAVVLFLIGAIIIALAPSWYQLIVGRILTGLGVGGASVLAPVYI 167 (513)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHH-hhhHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHhccchhhhhhcchhhH
Confidence 456999999999999999999999999 9999999999999999999999999999999999999999999999999999
Q ss_pred EeeecCcchhhHHhHHHHHHHHHHHHHHHHHHhccCC--chHHHHHHHHHHHHHHHhHhheeecCCchHhhhcCCHHHHH
Q 041759 195 TEKVGTEWRGLVGILDSFFFTIGTLTLPAIAYTNRSS--SWTIIYLWTSIPTLVYSGLLYIFVSESPRWLFMQGRQEEAV 272 (525)
Q Consensus 195 ~~~~~~~~r~~~~~~~~~~~~~G~~l~~~l~~~~~~~--~wr~~f~~~~~~~~~~~~~~~~~lpesp~~~~~~~~~~~~~ 272 (525)
+|..|++.||...+..+....+|..++..+++...+. +||..+.+..+++++.. +..+++||+|+|+..+++.++++
T Consensus 168 sEiap~~~RG~l~~~~~l~~~~Gi~~~~~~~~~~~~~~~~Wr~~~~~~~i~~~~~~-~~~~~~pesp~~L~~~g~~~~a~ 246 (513)
T KOG0254|consen 168 SEIAPAHIRGTLVSLYQLFITIGILLGYCINYGTSKVYAGWRIPLGLALIPAVILA-LGMLFLPESPRWLIEKGRLEEAK 246 (513)
T ss_pred hhcCChhhhHHHHHHHHHHHHHHHHHHHHHhhhhccCCccHHHHHHHHHHHHHHHH-HHHHhCCCChHHHHHcCChHHHH
Confidence 9999999999999999999999999998888887654 89999999999999988 44899999999999999999999
Q ss_pred HHHHhhCCCcCCccchhhhhhhccCC-CCcccccccccchhhhhhhhcchhHHHHHHHHHHHHHH-----HHHHHhhhhh
Q 041759 273 EVIKSLSPIKDSNQLSLSLVSAVSFG-HEPAASSKESSFLSSIRELFVRRWALERTLALMVPGFG-----IGVVYYGMTL 346 (525)
Q Consensus 273 ~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~ 346 (525)
+.++++.. .++.+...+..+...+. .+....++ ...++++++ |..++.....+..... .+...|+.+.
T Consensus 247 ~~l~~l~g-~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~l~~-~~~~~~~~i~~~l~~fqq~tG~~~~~~Y~~~ 320 (513)
T KOG0254|consen 247 RSLKRLRG-LSPEDVEVELELLKIKLLVEAEVAEG----KASWGELFS-PKVRKRLIIGLLLQLFQQLTGINYVFYYSTT 320 (513)
T ss_pred HHHHHHhC-CCCcchHHHHHHHHHHHHHhhhcccc----cccHHHhcC-cchHHHHHHHHHHHHHHHHhCCceEEeehHH
Confidence 99998833 23333333332222110 00000000 012444554 4444444444433332 2334455555
Q ss_pred cccccCChh--HHHHHHHHHhcccccccCchhHHHHHHHHHhhcChhHHHHHHHHHHHHHHHHHHhccccc--------c
Q 041759 347 GIENLGFDI--YLGVVFNALLEIPNLASTIPSFFLTFFLIQKWNRKSSLLVLFIISGICSIMAVVANDISN--------A 416 (525)
Q Consensus 347 ~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~l~d~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~--------~ 416 (525)
+++..|.+. .......+...+ ++.+++.++.||+|||++++.+...+.++.+++........ .
T Consensus 321 if~~~g~~~~~~~~~~~~~~v~~-------~~t~~~~~lvd~~gRr~lll~s~~~m~~~~~~~~~~~~~~~~~~~~~~~~ 393 (513)
T KOG0254|consen 321 IFKSAGLKSDTFLASIILGVVNF-------LGTLVATYLVDRFGRRKLLLFGAAGMSICLVILAVVGVFALYYPNSSKGA 393 (513)
T ss_pred HHHhcCCCCchHHHHHHHHHHHH-------HHHHHHHHHHHHhccHHHHHHhHHHHHHHHHHHHHHHHHhccCCCcccch
Confidence 566666553 455555566555 88888899999999999999999999999888776532210 1
Q ss_pred chhHHHHHHHHHHHHHHHHHHHHHhhhccccCcchhhhhhHHHHHHHHHHHHHHHHHHhh--ccCchhHHHHHHHHHHHH
Q 041759 417 GKRMRIGLELASLFSAYIAYTVIFIYAIELFPTCVRNSATSIMRLAIIFAAIFSSVLVAA--GSNNEFVSYGVFGLVIIC 494 (525)
Q Consensus 417 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~r~~~~~~~~~~~~~g~~~~p~i~~~--~~~~~~~~~~~~~~~~~~ 494 (525)
.+......++.......+..++.+.+.+|.+|.+.|+.+.++....+++.+.+-...... ...+....|..++.++.+
T Consensus 394 ~~~~~~~~~~~v~~f~~g~g~v~w~~~sEifp~~~r~~~~s~~~~~n~~~~~~v~~~~~~~~~~~~~~~~f~~f~~~~~~ 473 (513)
T KOG0254|consen 394 GWLAIVFLCLFIFSFAIGWGPVPWVIVSEIFPLRLRSKGASLAVAVNWLWNFLISFFFPFITEALGIGGTFGYFGGICLL 473 (513)
T ss_pred hHHHHHHHHHHHHHHhcccccchhhhhhccCcHhHHhhhHHHHHHHHHHHHHHHHHHHHHHHHhccccchHHHHHHHHHH
Confidence 122222222233333333446788899999999999999999999998877655444332 111124444444444444
Q ss_pred HHH--HHHhccCCCCCCccchHHHhcc
Q 041759 495 CGF--FVICLPETRGSSLCDTIDQREH 519 (525)
Q Consensus 495 ~~~--~~~~~~~~~~~~~~~~~~~~~~ 519 (525)
... +++++||+|++++++.++..++
T Consensus 474 ~~~~fv~~~~pETkg~sleei~~~~~~ 500 (513)
T KOG0254|consen 474 SLIIFVFFFVPETKGLTLEEINELFEE 500 (513)
T ss_pred HHHHHheEEcccCCCCcHHHHHHHHHc
Confidence 443 5677899999999888775544
No 21
>PRK12307 putative sialic acid transporter; Provisional
Probab=100.00 E-value=2.5e-33 Score=280.26 Aligned_cols=355 Identities=17% Similarity=0.166 Sum_probs=261.9
Q ss_pred HHHHHHHHHHHHHHHHHHhhhcccCccccccCCCCCCCCCCCCCCCCCCceecCCCCccccceeeccccccchhhhhhhH
Q 041759 41 QAILVSLASLFDSQQSFISVYTEAEPTWHCLNNTTCSSASNICMFPKSSWAWDGNPTTTALTIISEWGLECSSAFIKGLP 120 (525)
Q Consensus 41 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~c~~~~~~~~~~~~p~~~~~~i~~~~~~~~~s~~~~g~~ 120 (525)
....+.++++.+.++.....+. .|.+++++|+ ++.+.+++
T Consensus 19 ~~~~~~~~~~~~~~~~~~~~~~-------------------------------------~~~i~~~~~~---s~~~~~~~ 58 (426)
T PRK12307 19 ALFSAWLGYVFDGFDFMLIFYI-------------------------------------MYLIKADLGL---TDMEGAFL 58 (426)
T ss_pred HHHHHHHHHHHHHhHHHHHHHH-------------------------------------HHHHHHHhCC---CHHHHHHH
Confidence 5677788888999999999888 9999999999 99999999
Q ss_pred HHHHHHHHHHhHHhhHhcccccCCchHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHhhcccchhhhhheeeEeeecC
Q 041759 121 AASHFTGCLLGIVFLATLADSSLGRKNLLFLSCLTMSVATSLTIFSNNLWIYSLLRFFSGISRATIGTCTIVLLTEKVGT 200 (525)
Q Consensus 121 ~s~~~lg~~~~~~~~G~l~dr~~Grk~~~~~~~~~~~i~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~ 200 (525)
.+++.+++.+++++.|+++|| +|||+++.++.++.+++.++.+++++++.++++|+++|++.+...+....++.|++|+
T Consensus 59 ~~~~~~~~~l~~~~~g~l~dr-~g~r~~l~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~g~g~~~~~~~~~~~~~~~~ 137 (426)
T PRK12307 59 ATAAFIGRPFGGALFGLLADK-FGRKPLMMWSIVAYSVGTGLSGLASGVIMLTLSRFIVGMGMAGEYACASTYAVESWPK 137 (426)
T ss_pred HHHHHHHHHHHHHHHHHHHHH-hCChHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHhhHHHHHHHHHHHhCCH
Confidence 999999999999999999999 9999999999999999999999999999999999999999999999999999999999
Q ss_pred cchhhHHhHHHHHHHHHHHHHHHH-HHhccCCchHHHHHHHHHHHHHHHhHhheeecCCchHhhhcCCHHHHHHHHHhhC
Q 041759 201 EWRGLVGILDSFFFTIGTLTLPAI-AYTNRSSSWTIIYLWTSIPTLVYSGLLYIFVSESPRWLFMQGRQEEAVEVIKSLS 279 (525)
Q Consensus 201 ~~r~~~~~~~~~~~~~G~~l~~~l-~~~~~~~~wr~~f~~~~~~~~~~~~~~~~~lpesp~~~~~~~~~~~~~~~~~~~~ 279 (525)
++|+++.++...+..+|.++++.+ +.+....+||+.|++..+..++.. ......||++++...+. +
T Consensus 138 ~~r~~~~~~~~~~~~lg~~~~~~l~~~l~~~~~w~~~f~i~~~~~~~~~-~~~~~~p~~~~~~~~~~---------~--- 204 (426)
T PRK12307 138 HLKSKASAFLVSGFGIGNIIAAYFMPSFAEAYGWRAAFFVGLLPVLLVI-YIRARAPESKEWEEAKL---------S--- 204 (426)
T ss_pred hHhhHhhhHHHHHHhHHHHHHHHHHHHHcccCCHHHHHHHHHHHHHHHH-HHHHHCCCChHHHHhhh---------h---
Confidence 999999999999999999999877 556667899999988655444333 33333455443211000 0
Q ss_pred CCcCCccchhhhhhhccCCCCcccccccccchhhhhhhhcchhHHHHHHHHHHHHHHH---HHHHhhhhhcccccCChhH
Q 041759 280 PIKDSNQLSLSLVSAVSFGHEPAASSKESSFLSSIRELFVRRWALERTLALMVPGFGI---GVVYYGMTLGIENLGFDIY 356 (525)
Q Consensus 280 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~ 356 (525)
. ++++ .+... ......++++++++.++............. ......+|.+.++.|.+..
T Consensus 205 ~-~~~~-------------~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~ 266 (426)
T PRK12307 205 G-KGKH-------------SQSAW----SVFSLSMKGLFNRAQFPLTLCVFIVLFSIFGANWPIFGLLPTYLAGEGFDTG 266 (426)
T ss_pred c-cccc-------------cccch----hhhhHHHHHHHhhchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHH
Confidence 0 0000 00000 000125667888877554333222222111 1233345666667788877
Q ss_pred HHHHHHHHhcccccccCchhHHHHHHHHHhhcChhHHHHHHHHHHHHHHHHHHhccccccchhHHHHHHHHHHH--HHHH
Q 041759 357 LGVVFNALLEIPNLASTIPSFFLTFFLIQKWNRKSSLLVLFIISGICSIMAVVANDISNAGKRMRIGLELASLF--SAYI 434 (525)
Q Consensus 357 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~d~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~ 434 (525)
..........+ +.+++.++.+++.||++||+.+..+.++..+..+.+...... .. . .+..++.+. ....
T Consensus 267 ~~~~~~~~~~~----~~~~g~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~-~-~~~~~~~~~~~~~~~ 337 (426)
T PRK12307 267 VVSNLMTAAAF----GTVLGNIVWGLCADRIGLKKTFSIGLLMSFLFIFPLFRIPQD---NY-L-LLGACLFGLMATNVG 337 (426)
T ss_pred HHHHHHHHHHH----HHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHccc---cH-H-HHHHHHHHHHHhccc
Confidence 77766666666 677999999999999999999888887776665544433322 12 1 112222222 1122
Q ss_pred HHHHHHhhhccccCcchhhhhhHHHHHHHHHHHHHHHHHHhh
Q 041759 435 AYTVIFIYAIELFPTCVRNSATSIMRLAIIFAAIFSSVLVAA 476 (525)
Q Consensus 435 ~~~~~~~~~~~~~p~~~r~~~~~~~~~~~~~g~~~~p~i~~~ 476 (525)
..+....++.|.+|++.|++++|+.+....+|+.++|.+.+.
T Consensus 338 ~~~~~~~~~~~~~p~~~~g~~~g~~~~~~~~~~~~gp~~~g~ 379 (426)
T PRK12307 338 VGGLVPKFLYDYFPLEVRGLGTGLIYNLAATSGTFNSMAATW 379 (426)
T ss_pred HhHHHHHHHHHhCcHHHHhhhhhHHHHHHhHHHHHHHHHHHH
Confidence 334566778899999999999999999999999999999985
No 22
>PRK11273 glpT sn-glycerol-3-phosphate transporter; Provisional
Probab=100.00 E-value=1.9e-32 Score=274.85 Aligned_cols=376 Identities=11% Similarity=0.029 Sum_probs=252.1
Q ss_pred ccceeeccccccchhhhhhhHHHHHHHHHHHhHHhhHhcccccCCchHHHHHHHHHHHHHHHHHHhhh----hHHHHHHH
Q 041759 100 ALTIISEWGLECSSAFIKGLPAASHFTGCLLGIVFLATLADSSLGRKNLLFLSCLTMSVATSLTIFSN----NLWIYSLL 175 (525)
Q Consensus 100 ~~~i~~~~~~~~~s~~~~g~~~s~~~lg~~~~~~~~G~l~dr~~Grk~~~~~~~~~~~i~~~~~~~~~----~~~~l~~~ 175 (525)
.|.+.++ |+ +..+.|++.+++.+++.++++++|+++|| +|||++++++.++.+++.+++++++ +++.+++.
T Consensus 52 ~p~l~~~-g~---s~~~~g~~~~~~~i~~~~~~~~~G~l~Dr-~g~k~~l~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~ 126 (452)
T PRK11273 52 MPYLVEQ-GF---SRGDLGFALSGISIAYGFSKFIMGSVSDR-SNPRVFLPAGLILAAAVMLFMGFVPWATSSIAVMFVL 126 (452)
T ss_pred hHHHHHc-CC---CHHHHHHHHHHHHHHHHHHHhhhhhhhhc-cCCchhHHHHHHHHHHHHHHHHhhhcccccHHHHHHH
Confidence 7888888 99 99999999999999999999999999999 9999999999999999999888763 78899999
Q ss_pred HHHHhhcccchhhhhheeeEeeecCcchhhHHhHHHHHHHHHHH-HHHHHH-HhccCCchHHHHHHHHHHHHHHHhHhhe
Q 041759 176 RFFSGISRATIGTCTIVLLTEKVGTEWRGLVGILDSFFFTIGTL-TLPAIA-YTNRSSSWTIIYLWTSIPTLVYSGLLYI 253 (525)
Q Consensus 176 r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~-l~~~l~-~~~~~~~wr~~f~~~~~~~~~~~~~~~~ 253 (525)
|++.|++.+...+.....+.|++|+++|++++++++.+.++|.. .+|+++ ......+||+.|++.+++.++..++..+
T Consensus 127 ~~l~gi~~g~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~l~~~~~~~~~gw~~~f~i~~~~~~~~~~l~~~ 206 (452)
T PRK11273 127 LFLCGWFQGMGWPPCGRTMVHWWSQKERGGIVSVWNCAHNVGGGLPPLLFLLGMAWFNDWHAALYMPAFAAILVALFAFA 206 (452)
T ss_pred HHHHHHHHhccchHHHHHHHHhCChHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999988888888889999999999999999999999874 466553 2323459999999998888777657777
Q ss_pred eecCCchHhhhcCCHHHHHHHHHhhCCCcCCccchhhhhhhccCCCCcccccccccchhh-hhhhhcchhHHHHHHHHHH
Q 041759 254 FVSESPRWLFMQGRQEEAVEVIKSLSPIKDSNQLSLSLVSAVSFGHEPAASSKESSFLSS-IRELFVRRWALERTLALMV 332 (525)
Q Consensus 254 ~lpesp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~l~~~~~~~~~~~~~~~ 332 (525)
++||+|+....+ +.++.+ + ..+. + ..+ .++ + ++ +.... .+.+++++.++...+..++
T Consensus 207 ~~~~~~~~~~~~-~~~~~~-------~-~~~~----~---~~~-~~~-~--~~--~~~~~~~~~~~~~~~~~~~~l~~~~ 264 (452)
T PRK11273 207 MMRDTPQSCGLP-PIEEYK-------N-DYPD----D---YNE-KHE-Q--EL--TAKQIFMQYVLPNKLLWYIAIANVF 264 (452)
T ss_pred HccCCHhhcCCC-Chhhhh-------h-cccc----c---ccc-ccC-C--Cc--cHHHHHHHHHHcChHHHHHHHHHHH
Confidence 788877531111 111000 0 0000 0 000 000 0 00 00111 2346778877766666555
Q ss_pred HHHHHHHHHhhhhhcccc-cCChhHHHHHHHHHhcccccccCchhHHHHHHHHHhh--cChhHHH-HHHHHHHHHHHHHH
Q 041759 333 PGFGIGVVYYGMTLGIEN-LGFDIYLGVVFNALLEIPNLASTIPSFFLTFFLIQKW--NRKSSLL-VLFIISGICSIMAV 408 (525)
Q Consensus 333 ~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~d~~--g~~~~~~-~~~~~~~~~~~~~~ 408 (525)
..........+.|.++++ .|++....+....+..+ +.+++.++.|+++||+ +||.... ....+..++.+++.
T Consensus 265 ~~~~~~~~~~~~P~~l~~~~g~s~~~~~~~~~~~~~----~~~~g~~~~G~l~dr~~~~r~~~~~~~~~~l~~~~~~~~~ 340 (452)
T PRK11273 265 VYLLRYGILDWSPTYLKEVKHFALDKSSWAYFLYEY----AGIPGTLLCGWMSDKVFRGNRGATGVFFMTLVTIATIVYW 340 (452)
T ss_pred HHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHH----HHHHHHHHHHHHHHHHccCCcchHHHHHHHHHHHHHHHHH
Confidence 555444444455666654 67887777666666555 6668999999999999 4444322 22222333333222
Q ss_pred HhccccccchhHHHHHHHHHHHHHHHHHHHHHhhhccccCcchhhhhhHHHHHHHHHHHHH-HHHHHhh--ccCchhHHH
Q 041759 409 VANDISNAGKRMRIGLELASLFSAYIAYTVIFIYAIELFPTCVRNSATSIMRLAIIFAAIF-SSVLVAA--GSNNEFVSY 485 (525)
Q Consensus 409 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~r~~~~~~~~~~~~~g~~~-~p~i~~~--~~~~~~~~~ 485 (525)
..... +.....+..+..+............+..|.+|++.||++.|+.+....+|+.+ +|.+.|. +..++...|
T Consensus 341 ~~~~~---~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~~~g~~~g~~~~~~~~g~~~~g~~v~g~l~~~~g~~~~f 417 (452)
T PRK11273 341 LNPAG---NPTVDMACMIVIGFLIYGPVMLIGLHALELAPKKAAGTAAGFTGLFGYLGGSVAASAIVGYTVDFFGWDGGF 417 (452)
T ss_pred Hhccc---ChHHHHHHHHHHHHHHHhHHHHHHHHHHHHcChhhhhhHHHHHHHHHHHHHHHhhhhhHHHHHHHhcchHHH
Confidence 22211 12222233333333332323334456779999999999999999988888654 7888874 333567777
Q ss_pred HHHHHHHHHHHHHHHhccCCCCCC
Q 041759 486 GVFGLVIICCGFFVICLPETRGSS 509 (525)
Q Consensus 486 ~~~~~~~~~~~~~~~~~~~~~~~~ 509 (525)
.+++++++++.+....+...++|+
T Consensus 418 ~~~~~~~~~~~~~~~~~~~~~~~~ 441 (452)
T PRK11273 418 MVMIGGSILAVILLIVVMIGEKRH 441 (452)
T ss_pred HHHHHHHHHHHHHHHHHhccccch
Confidence 777777777766655444333343
No 23
>PRK14995 methyl viologen resistance protein SmvA; Provisional
Probab=100.00 E-value=9.2e-33 Score=279.90 Aligned_cols=378 Identities=15% Similarity=0.019 Sum_probs=283.6
Q ss_pred HHHHHHHHHHHHHHHHHHhhhcccCccccccCCCCCCCCCCCCCCCCCCceecCCCCccccceeeccccccchhhhhhhH
Q 041759 41 QAILVSLASLFDSQQSFISVYTEAEPTWHCLNNTTCSSASNICMFPKSSWAWDGNPTTTALTIISEWGLECSSAFIKGLP 120 (525)
Q Consensus 41 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~c~~~~~~~~~~~~p~~~~~~i~~~~~~~~~s~~~~g~~ 120 (525)
.+..++++.++...|.++++.+ .|.+.+|+|. +..+.+|+
T Consensus 7 ~~~~~~~~~~~~~ld~tiv~~a-------------------------------------~p~i~~~l~~---s~~~~~~~ 46 (495)
T PRK14995 7 TLVIIVLVYIPVAIDATVLHVA-------------------------------------APTLSMTLGA---SGNELLWI 46 (495)
T ss_pred HHHHHHHHHHHHHHHHHHHHHH-------------------------------------HHHHHHHhCC---CHhHHHHH
Confidence 6788899999999999999999 9999999999 99999999
Q ss_pred HHHHHHHHHHhHHhhHhcccccCCchHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHhhcccchhhhhheeeEeee-c
Q 041759 121 AASHFTGCLLGIVFLATLADSSLGRKNLLFLSCLTMSVATSLTIFSNNLWIYSLLRFFSGISRATIGTCTIVLLTEKV-G 199 (525)
Q Consensus 121 ~s~~~lg~~~~~~~~G~l~dr~~Grk~~~~~~~~~~~i~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~-~ 199 (525)
.+.|.++..++++++|+++|| +|||++++++.++++++++++++++|++.++++|+++|+|.+...+.....+.+.+ |
T Consensus 47 ~~~~~l~~~~~~~~~G~l~D~-~Grk~~l~~~~~~~~~~~~~~~~a~~~~~li~~r~l~G~g~~~~~~~~~~~l~~~~~~ 125 (495)
T PRK14995 47 IDIYSLVMAGMVLPMGALGDR-IGFKRLLMLGGTLFGLASLAAAFSPTASWLIATRALLAIGAAMIVPATLAGIRATFTE 125 (495)
T ss_pred HHHHHHHHHHHHHHHHHHHHH-hccHHHHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCC
Confidence 999999999999999999999 99999999999999999999999999999999999999999998888887776665 6
Q ss_pred CcchhhHHhHHHHHHHHHHHHHHHH-HHhccCCchHHHHHHHHHHHHHHHhHhheeecCCchHhhhcCCHHHHHHHH---
Q 041759 200 TEWRGLVGILDSFFFTIGTLTLPAI-AYTNRSSSWTIIYLWTSIPTLVYSGLLYIFVSESPRWLFMQGRQEEAVEVI--- 275 (525)
Q Consensus 200 ~~~r~~~~~~~~~~~~~G~~l~~~l-~~~~~~~~wr~~f~~~~~~~~~~~~~~~~~lpesp~~~~~~~~~~~~~~~~--- 275 (525)
+++|+++++++.....+|.++||.+ +.+.+..+|||.|++...+.++..++..+++||.++.. +++.+......
T Consensus 126 ~~~r~~~~g~~~~~~~~g~~~gp~lgg~l~~~~gwr~~f~i~~~~~~~~~~l~~~~l~~~~~~~--~~~~d~~g~~~~~~ 203 (495)
T PRK14995 126 EKQRNMALGVWAAVGSGGAAFGPLVGGILLEHFYWGSVFLINVPIVLVVMGLTARYVPRQAGRR--DQPLNLGHALMLIV 203 (495)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCChHHHHHHHHHHHHHHHHHHHHhCCCCCCCC--CCCCChHhHHHHHH
Confidence 7999999999999999999999999 55557789999999998888777756667778765311 11111110000
Q ss_pred ------HhhCCC-cCCccchhhhh-----------hhccCCCCcccccccccchhhhhhhhcchhHHHHHHHHHHHHHHH
Q 041759 276 ------KSLSPI-KDSNQLSLSLV-----------SAVSFGHEPAASSKESSFLSSIRELFVRRWALERTLALMVPGFGI 337 (525)
Q Consensus 276 ------~~~~~~-~~~~~~~~~~~-----------~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~ 337 (525)
...... .+......... ....+... + ++ .-..+++++|.+....+..+......
T Consensus 204 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~f~~~e~~~-----~--~p-~~~~~lf~~~~~~~~~~~~~~~~~~~ 275 (495)
T PRK14995 204 AILLLVYSAKTALKGFLSLWVTSLTLLTGALLLGLFIRTQLAA-----S--RP-MIDMRLFTHRIILSGVVMAMTAMITL 275 (495)
T ss_pred HHHHHHHHHHhccccCCchHHHHHHHHHHHHHHHHHHHHHhcC-----C--CC-CcCHHHhCCcccHHHHHHHHHHHHHH
Confidence 000000 00000000000 00000000 0 00 11246788887665555555544444
Q ss_pred HHHHhhhhhcccc-cCChhHHHHHHHHHhcccccccCchhHHHHHHHHHhhcChhHHHHHHHHHHHHHHHHHHhcccccc
Q 041759 338 GVVYYGMTLGIEN-LGFDIYLGVVFNALLEIPNLASTIPSFFLTFFLIQKWNRKSSLLVLFIISGICSIMAVVANDISNA 416 (525)
Q Consensus 338 ~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~d~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 416 (525)
....+..|.+++. .|.++.+++.......+ +..++.++.|++.||+|+|+.+..+..+.+++.+++...... .
T Consensus 276 ~~~~~~~~~~lq~v~g~s~~~ag~~~~~~~~----~~~~~~~~~g~l~~r~g~~~~~~~g~~~~~~~~~~l~~~~~~--~ 349 (495)
T PRK14995 276 VGFELLMAQELQFVHGLSPLEAGMFMLPVMV----ASGFSGPIAGILVSRLGLRLVATGGMALSALSFYGLAMTDFS--T 349 (495)
T ss_pred HHHHHHHHHHHHHHcCCCHHHHHHHHHHHHH----HHHHHHHHHHHHHHHcCchHHHHHHHHHHHHHHHHHHHhcCC--C
Confidence 4444455655554 78898888888776666 777899999999999999999888888877777665544322 1
Q ss_pred chhHHHHHHHHHHHHHHHHHHHHHhhhccccCcchhhhhhHHHHHHHHHHHHHHHHHHh
Q 041759 417 GKRMRIGLELASLFSAYIAYTVIFIYAIELFPTCVRNSATSIMRLAIIFAAIFSSVLVA 475 (525)
Q Consensus 417 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~r~~~~~~~~~~~~~g~~~~p~i~~ 475 (525)
+........++.+++.+...+.....+.+..|++.++.+.++.+....+|+.+|+.+.+
T Consensus 350 ~~~~~~~~~~l~G~g~g~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~lG~~~G~ai~g 408 (495)
T PRK14995 350 QQWQAWGLMALLGFSAASALLASTSAIMAAAPPEKAAAAGAIETMAYELGAGLGIAIFG 408 (495)
T ss_pred chHHHHHHHHHHHHhHHHHHHHHHHHHHhcCCHHhcchHHHHHHHHHHHHHHHHHHHHH
Confidence 23344556777888888888888888889999999999999999999999998887776
No 24
>TIGR00890 2A0111 Oxalate/Formate Antiporter.
Probab=100.00 E-value=4.1e-33 Score=274.22 Aligned_cols=346 Identities=12% Similarity=0.049 Sum_probs=261.3
Q ss_pred ccceeeccccccchhhhhhhHHHHHHHHHHHhHHhhHhcccccCCchHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHH
Q 041759 100 ALTIISEWGLECSSAFIKGLPAASHFTGCLLGIVFLATLADSSLGRKNLLFLSCLTMSVATSLTIFSNNLWIYSLLRFFS 179 (525)
Q Consensus 100 ~~~i~~~~~~~~~s~~~~g~~~s~~~lg~~~~~~~~G~l~dr~~Grk~~~~~~~~~~~i~~~~~~~~~~~~~l~~~r~l~ 179 (525)
.|.+++++|+ +..+.|++.+++.++..+++++.|+++|| +|||+++.++.++.+++.+++++++|++.++++|++.
T Consensus 26 ~~~~~~~~~~---s~~~~g~~~s~~~~~~~~~~~~~G~l~d~-~G~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 101 (377)
T TIGR00890 26 APPLGRYFGV---GVTAVAIWFTLLLIGLAMSMPVGGLLADK-FGPRAVAMLGGILYGLGFTFYAIADSLAALYLTYGLA 101 (377)
T ss_pred HHHHHHHhCC---CHHHHHHHHHHHHHHHHHHhhhhHHHHHH-cCccchhHHhHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 8999999999 99999999999999999999999999999 9999999999999999999999999999999999999
Q ss_pred hhcccchhhhhheeeEeeecCcchhhHHhHHHHHHHHHHHHH-HHHHHhccCCchHHHHHHHHHHHHHHHhHhheeecCC
Q 041759 180 GISRATIGTCTIVLLTEKVGTEWRGLVGILDSFFFTIGTLTL-PAIAYTNRSSSWTIIYLWTSIPTLVYSGLLYIFVSES 258 (525)
Q Consensus 180 G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~l~-~~l~~~~~~~~wr~~f~~~~~~~~~~~~~~~~~lpes 258 (525)
|++.+...+.....+.+++| ++|+++.++...+.++|.+++ |+.+.+....+||+.|++.+++.++..+..+++++|+
T Consensus 102 g~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~~~~~~ 180 (377)
T TIGR00890 102 SAGVGIAYGIALNTAVKWFP-DKRGLASGIIIGGYGLGSFILSPLITSVINLEGVPAAFIYMGIIFLLVIVLGAFLIGYP 180 (377)
T ss_pred hHHHHHHHHhHHHHHHHHcC-cccHHHHHHHHHhcchhHhHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHHHHheecC
Confidence 99999888888888888886 579999999999999998874 4557777778999999999998888775666666654
Q ss_pred chHhhhcCCHHHHHHHHHhhCCCcCCccchhhhhhhccCCCCcccccccccchhhhhhhhcchhHHHHHHHHHHHHHHHH
Q 041759 259 PRWLFMQGRQEEAVEVIKSLSPIKDSNQLSLSLVSAVSFGHEPAASSKESSFLSSIRELFVRRWALERTLALMVPGFGIG 338 (525)
Q Consensus 259 p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~ 338 (525)
|+. +.+ + +++. ++ + ....++.++++.++...+..+.......
T Consensus 181 ~~~---~~~------------~-~~~~-------------~~----~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 222 (377)
T TIGR00890 181 PGQ---LIK------------T-NIEV-------------SV----K-----DYTVWEMLRTPQFWVLYLSFFLNAVSGL 222 (377)
T ss_pred chh---ccc------------c-Cccc-------------ch----h-----hhhHHHHHcCccHHHHHHHHHHHhHHHH
Confidence 320 000 0 0000 00 0 0234567777775554443333333222
Q ss_pred HHHhhhhhcccccCChhHHHHHHHHHhcccccccCchhHHHHHHHHHhhcChhHHHHHHHHHHHHHHHHHHhccccccch
Q 041759 339 VVYYGMTLGIENLGFDIYLGVVFNALLEIPNLASTIPSFFLTFFLIQKWNRKSSLLVLFIISGICSIMAVVANDISNAGK 418 (525)
Q Consensus 339 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~d~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 418 (525)
......+.+.++.+.+............+ +.+++.++.+++.||++||+.+.++..+..++.+++...+.. ..
T Consensus 223 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~~---~~ 295 (377)
T TIGR00890 223 LLIGLYKPYGQSLGLSDGFLVLAVSISSI----FNGGGRPFLGALSDKIGRQKTMSIVFGISAVGMAAMLFIPML---ND 295 (377)
T ss_pred HHHHHHHHHHHHcCCCHHHHHHHHHHHHH----HHHHHHHHHHHHHHHHhhhhhhhHHHHHHHHHHHHHHHcccc---hh
Confidence 22222344456677777666666666666 677999999999999999999998888888877766554432 11
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHhhhccccCcchhhhhhHHHHHHHHHHHHHHHHHHhh--ccCchhHHHHHHHHHHHHH
Q 041759 419 RMRIGLELASLFSAYIAYTVIFIYAIELFPTCVRNSATSIMRLAIIFAAIFSSVLVAA--GSNNEFVSYGVFGLVIICC 495 (525)
Q Consensus 419 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~r~~~~~~~~~~~~~g~~~~p~i~~~--~~~~~~~~~~~~~~~~~~~ 495 (525)
.......++.+++.+...+....+..|.+|+++|+++.|+.+....+|..++|.+.|. +..++...+.+.+++.+++
T Consensus 296 ~~~~~~~~~~g~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~~~~~~~g~l~~~~g~~~~f~~~~~~~~~~ 374 (377)
T TIGR00890 296 VLFLATVALVFFTWGGTISLFPSLVSDIFGPANSAANYGFLYTAKAVAGIFGGLIASHALTEIGFEYTFIVTGAFALTS 374 (377)
T ss_pred HHHHHHHHHHHHHhccchhccHHHHHHHhhhhhhhhHhHHHHHHHHHHHHHHHHHHHHHHhhhchhhHHHHHHHHHHHh
Confidence 2233344555666666666777889999999999999999999999999999999985 3345666666666655544
No 25
>TIGR00893 2A0114 d-galactonate transporter.
Probab=100.00 E-value=7.4e-33 Score=274.36 Aligned_cols=371 Identities=15% Similarity=0.148 Sum_probs=264.0
Q ss_pred ccceeeccccccchhhhhhhHHHHHHHHHHHhHHhhHhcccccCCchHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHH
Q 041759 100 ALTIISEWGLECSSAFIKGLPAASHFTGCLLGIVFLATLADSSLGRKNLLFLSCLTMSVATSLTIFSNNLWIYSLLRFFS 179 (525)
Q Consensus 100 ~~~i~~~~~~~~~s~~~~g~~~s~~~lg~~~~~~~~G~l~dr~~Grk~~~~~~~~~~~i~~~~~~~~~~~~~l~~~r~l~ 179 (525)
.|.+++++|+ +..+.|++.+++.++..+++++.|+++|| +|||+++.++.++.+++.++.++++|++.++++|++.
T Consensus 17 ~~~~~~~~g~---s~~~~~~~~~~~~~~~~~~~~~~g~l~d~-~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 92 (399)
T TIGR00893 17 APMLQEDLGL---SAAQYGYVFSAFSWGYVVGQFPGGWLLDR-FGARKTLAVFIVIWGVFTGLQAFAGAYVSLYILRVLL 92 (399)
T ss_pred HHHHHHhhCC---ChhhHHHHHHHHHHHHHHHHHhHHHHHHh-cCcceeeHHHHHHHHHHHHHHHHHcCHHHHHHHHHHH
Confidence 8899999999 99999999999999999999999999999 9999999999999999999999999999999999999
Q ss_pred hhcccchhhhhheeeEeeecCcchhhHHhHHHHHHHHHHHHHHHH-HHhccCCchHHHHHHHHHHHHHHHhHhheeecCC
Q 041759 180 GISRATIGTCTIVLLTEKVGTEWRGLVGILDSFFFTIGTLTLPAI-AYTNRSSSWTIIYLWTSIPTLVYSGLLYIFVSES 258 (525)
Q Consensus 180 G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~l~~~l-~~~~~~~~wr~~f~~~~~~~~~~~~~~~~~lpes 258 (525)
|++.+...+....++.|++|+++|++++++.+....+|.++++.+ +.+....+||+.|++.+++.++..++..++.||+
T Consensus 93 g~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 172 (399)
T TIGR00893 93 GAAEAPFFPGIILIVASWFPASERATAVSIFNSAQGLGGIIGGPLVGWILIHFSWQWAFIIEGVLGIIWGVLWLKFIPDP 172 (399)
T ss_pred HHHHHhhhhHHHHHHHHhCCHHHHHHHHHHHHHhchHHHHHHHHHHHHHHHhCCchHHHHHHHHHHHHHHHHhhheecCC
Confidence 999999999999999999999999999999999999999999988 4556778999999999888887775666677776
Q ss_pred chHhhhcCCHHHHHHHHHhhCCCcCCccchhhhhhhccCCCCcccccccccchhhhhhhhcchhHHHHHHHHHHHHHHHH
Q 041759 259 PRWLFMQGRQEEAVEVIKSLSPIKDSNQLSLSLVSAVSFGHEPAASSKESSFLSSIRELFVRRWALERTLALMVPGFGIG 338 (525)
Q Consensus 259 p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~ 338 (525)
|+... ..++++.....++. + . +. +.++.++.. ....++.+++|+++...+..+.......
T Consensus 173 ~~~~~-~~~~~~~~~~~~~~-~-~----------~~--~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 232 (399)
T TIGR00893 173 PQKAK-WLTEEEKYIVVGGL-L-A----------EQ--QGKGPSTPK-----KYQIKELLKDRRVWGLALGQFLVNIGLG 232 (399)
T ss_pred CCccc-cCCHHHHhhcchhh-c-c----------cc--ccccccCCC-----ccchHHHhcCHHHHHHHHHHHHHHhHHH
Confidence 53110 00111100000000 0 0 00 000000001 1356778888887666666555555555
Q ss_pred HHHhhhhhcc-cccCChhHHHHHHHHHhcccccccCchhHHHHHHHHHhhcChh--HHHHHHHH--HHHHHHHHHHhccc
Q 041759 339 VVYYGMTLGI-ENLGFDIYLGVVFNALLEIPNLASTIPSFFLTFFLIQKWNRKS--SLLVLFII--SGICSIMAVVANDI 413 (525)
Q Consensus 339 ~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~d~~g~~~--~~~~~~~~--~~~~~~~~~~~~~~ 413 (525)
......+.+. +..+.+....+.......+ +.+++.++.+++.||++||+ ........ ..+...+.......
T Consensus 233 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 308 (399)
T TIGR00893 233 FFLTWFPTYLVQERGLSILEAGFMASLPGI----VGFIGMILGGRLSDLLLRRGKSLVFARKTAIIAGLVLSLLMFATNY 308 (399)
T ss_pred HHHHHHHHHHHHHhcccHHHhhHHHHHHHH----HHHHHHHHHHHHHHHHhhcccchhHHHHHHHHHHHHHHHHHHHhcc
Confidence 5444555555 4477777777777666666 66689999999999999886 11111111 11111111111111
Q ss_pred cccchhHHHHHHHHHHHHHHHHHHHHHhhhccccCcchhhhhhHHHHHHHHHHHHHHHHHHhhc--cCc-hhHHHHHHHH
Q 041759 414 SNAGKRMRIGLELASLFSAYIAYTVIFIYAIELFPTCVRNSATSIMRLAIIFAAIFSSVLVAAG--SNN-EFVSYGVFGL 490 (525)
Q Consensus 414 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~r~~~~~~~~~~~~~g~~~~p~i~~~~--~~~-~~~~~~~~~~ 490 (525)
............+..++.+ ..+....+..|.+|++.|+++.|+.+....+|..++|.+.|.. ..+ +...+.+.++
T Consensus 309 -~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~g~~~~~~i~g~l~~~~g~~~~~~~~~~~ 386 (399)
T TIGR00893 309 -VNIPYAALALVALGFFGLG-AGAIGWALISDNAPGNIAGLTGGLINSLGNLGGIVGPIVIGAIAATTGSFAGALMVVAA 386 (399)
T ss_pred -chhHHHHHHHHHHHHhchh-hhhHHHHHHHhhcChhHHHHHHHHHHHHHHHhhhhhhHHhhhhccCCCchhHHHHHHHH
Confidence 0112223333333333333 6788899999999999999999999999999999999999852 234 5666666666
Q ss_pred HHHHHHHHHH
Q 041759 491 VIICCGFFVI 500 (525)
Q Consensus 491 ~~~~~~~~~~ 500 (525)
+.+++.+..+
T Consensus 387 ~~~~~~~~~~ 396 (399)
T TIGR00893 387 LALIGALSYL 396 (399)
T ss_pred HHHHHHHHHH
Confidence 6666555443
No 26
>PRK09705 cynX putative cyanate transporter; Provisional
Probab=100.00 E-value=1.9e-32 Score=269.67 Aligned_cols=350 Identities=11% Similarity=0.041 Sum_probs=256.1
Q ss_pred ccceeeccccccchhhhhhhHHHHHHHHHHHhHHhhHhcccccCCchHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHH
Q 041759 100 ALTIISEWGLECSSAFIKGLPAASHFTGCLLGIVFLATLADSSLGRKNLLFLSCLTMSVATSLTIFSNNLWIYSLLRFFS 179 (525)
Q Consensus 100 ~~~i~~~~~~~~~s~~~~g~~~s~~~lg~~~~~~~~G~l~dr~~Grk~~~~~~~~~~~i~~~~~~~~~~~~~l~~~r~l~ 179 (525)
+|.+++|+|+ |..+.|++.+.+.+++.+++++.|+++|| +|||+++..+..+++++.+++++++|++.++++|+++
T Consensus 32 lp~i~~~~~~---s~~~~g~~~s~~~~~~~l~~~~~g~l~dr-~G~r~~l~~~~~l~~~~~~~~~~a~~~~~ll~~r~l~ 107 (393)
T PRK09705 32 LPQLRQASGM---SFSVAALLTALPVVTMGGLALAGSWLHQH-VSERRSVAISLLLIAVGALMRELYPQSALLLSSALLG 107 (393)
T ss_pred HHHHHHHhCC---CHHHHHHHHHHHHHHHHHHhhhhHHHHHH-hCchHHHHHHHHHHHHHHHHHHHCcchHHHHHHHHHH
Confidence 8999999999 99999999999999999999999999999 9999999999999999999999999999999999999
Q ss_pred hhcccchhhhhheeeEeeecCcchhhHHhHHHHHHHHHHHHHHHHHHh-ccC-CchHHHHHHHHHHHHHHHhHhheeec-
Q 041759 180 GISRATIGTCTIVLLTEKVGTEWRGLVGILDSFFFTIGTLTLPAIAYT-NRS-SSWTIIYLWTSIPTLVYSGLLYIFVS- 256 (525)
Q Consensus 180 G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~l~~~l~~~-~~~-~~wr~~f~~~~~~~~~~~~~~~~~lp- 256 (525)
|++.+...+....++.+++| ++|+++++++..+...|..+++.++.. .+. .+||+.+.+.++..++.. +.++...
T Consensus 108 Gig~~~~~~~~~~~~~~~~~-~~~~~~~g~~~~~~~~g~~~g~~~~~~l~~~~~~w~~~~~~~~~~~~~~~-~~~~~~~~ 185 (393)
T PRK09705 108 GVGIGIIQAVMPSVIKRRFQ-QRTPLVMGLWSAALMGGGGLGAAITPWLVQHSETWYQTLAWWALPAVVAL-FAWWWQSA 185 (393)
T ss_pred HhHHHHHhhhhhHHHHHHcc-ccchhHHHHHHHHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHH-HHHHHHhc
Confidence 99999999998999999987 789999999999999999998888543 443 389998877666655443 3222221
Q ss_pred CCchHhhhcCCHHHHHHHHHhhCCCcCCccchhhhhhhccCCCCcccccccccchhhhhhhhcchhHHHHHHHHHHHHHH
Q 041759 257 ESPRWLFMQGRQEEAVEVIKSLSPIKDSNQLSLSLVSAVSFGHEPAASSKESSFLSSIRELFVRRWALERTLALMVPGFG 336 (525)
Q Consensus 257 esp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~ 336 (525)
+.|+ .+++ ++ ...++.+++++.+...+..++....
T Consensus 186 ~~~~---------------------~~~~-------------~~-----------~~~~~~l~~~~~~~l~~~~~~~~~~ 220 (393)
T PRK09705 186 REVA---------------------SSHK-------------TT-----------TTPVRVVFTPRAWTLGVYFGLINGG 220 (393)
T ss_pred CCCc---------------------cccC-------------CC-----------cCCcccccCHhHHHHHHHHHHHHHH
Confidence 1110 0000 00 0112334555544444433333333
Q ss_pred HHHHHhhhhhcccccCChhHHHHHHHHHhcccccccCchhHHHHHHHHHhhcChhHHHHHHHHHHHHHHHHHHhcccccc
Q 041759 337 IGVVYYGMTLGIENLGFDIYLGVVFNALLEIPNLASTIPSFFLTFFLIQKWNRKSSLLVLFIISGICSIMAVVANDISNA 416 (525)
Q Consensus 337 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~d~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 416 (525)
........|.++++.|.+....+...++..+ +.+++.++.+++.||++||+....+..+..++.+++...+..
T Consensus 221 ~~~~~~~lp~~l~~~g~s~~~ag~~~~~~~i----~~i~g~~~~g~l~~r~~~~~~~~~~~~l~~~~~~~~~~~~~~--- 293 (393)
T PRK09705 221 YASLIAWLPAFYIEIGASAQYSGSLLALMTL----GQAAGALLMPAMARHQDRRKLLMLALVLQLVGFCGFIWLPLQ--- 293 (393)
T ss_pred HHHHHHHHHHHHHHcCCChhhhhHHHHHHHH----HHHHHHHHHHHHHhhccchHHHHHHHHHHHHHHHHHHHccch---
Confidence 3334444455566688888888888877777 888999999999999999999888887777776655443332
Q ss_pred chhHHHHHHHHHHHHHHHHHHHHHhhhcccc-CcchhhhhhHHHHHHHHHHHHHHHHHHhhc--c-CchhHHHHHHHHHH
Q 041759 417 GKRMRIGLELASLFSAYIAYTVIFIYAIELF-PTCVRNSATSIMRLAIIFAAIFSSVLVAAG--S-NNEFVSYGVFGLVI 492 (525)
Q Consensus 417 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-p~~~r~~~~~~~~~~~~~g~~~~p~i~~~~--~-~~~~~~~~~~~~~~ 492 (525)
.. . ...++.+++.+..++.......+.. |++.+++..|+.+....+++.++|.+.|+. . .++...+.+.++++
T Consensus 294 ~~-~--~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~~~~~gp~~~G~l~~~~g~~~~~~~~~~~~~ 370 (393)
T PRK09705 294 LP-V--LWAMVCGLGLGGAFPLCLLLALDHSVQPAIAGKLVAFMQGIGFIIAGLAPWFSGVLRSISGNYLMDWAFHALCV 370 (393)
T ss_pred HH-H--HHHHHHHHhccchHHHHHHHHHhhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCchHHHHHHHHHH
Confidence 11 1 1233455666666676666666666 467889999999999999999999999852 1 23556666666655
Q ss_pred HHHHHH-HHhccCCCCCCc
Q 041759 493 ICCGFF-VICLPETRGSSL 510 (525)
Q Consensus 493 ~~~~~~-~~~~~~~~~~~~ 510 (525)
++..+. ..+.||++.|.+
T Consensus 371 ~~~~~~~~~~~~~~~~~~~ 389 (393)
T PRK09705 371 VGLMIITLRFAPARFPQLW 389 (393)
T ss_pred HHHHHHHHHhccccccchh
Confidence 555444 345577766543
No 27
>PF00083 Sugar_tr: Sugar (and other) transporter; InterPro: IPR005828 Recent genome-sequencing data and a wealth of biochemical and molecular genetic investigations have revealed the occurrence of dozens of families of primary and secondary transporters. Two such families have been found to occur ubiquitously in all classifications of living organisms. These are the ATP-binding cassette (ABC) superfamily and the major facilitator superfamily (MFS), also called the uniporter-symporter-antiporter family. While ABC family permeases are in general multicomponent primary active transporters, capable of transporting both small molecules and macromolecules in response to ATP hydrolysis the MFS transporters are single-polypeptide secondary carriers capable only of transporting small solutes in response to chemiosmotic ion gradients. Although well over 100 families of transporters have now been recognised and classified, the ABC superfamily and MFS account for nearly half of the solute transporters encoded within the genomes of microorganisms. They are also prevalent in higher organisms. The importance of these two families of transport systems to living organisms can therefore not be overestimated []. The MFS was originally believed to function primarily in the uptake of sugars but subsequent studies revealed that drug efflux systems, Krebs cycle metabolites, organophosphate:phosphate exchangers, oligosaccharide:H1 symport permeases, and bacterial aromatic acid permeases were all members of the MFS. These observations led to the probability that the MFS is far more widespread in nature and far more diverse in function than had been thought previously. 17 subgroups of the MFS have been identified []. Evidence suggests that the MFS permeases arose by a tandem intragenic duplication event in the early prokaryotes. This event generated a 2-transmembrane-spanner (TMS) protein topology from a primordial 6-TMS unit. Surprisingly, all currently recognised MFS permeases retain the two six-TMS units within a single polypeptide chain, although in 3 of the 17 MFS families, an additional two TMSs are found []. Moreover, the well-conserved MFS specific motif between TMS2 and TMS3 and the related but less well conserved motif between TMS8 and TMS9 [] prove to be a characteristic of virtually all of the more than 300 MFS proteins identified.; GO: 0022857 transmembrane transporter activity, 0055085 transmembrane transport, 0016021 integral to membrane
Probab=100.00 E-value=7.3e-39 Score=322.53 Aligned_cols=385 Identities=25% Similarity=0.399 Sum_probs=279.9
Q ss_pred hhhhhhhHHHHHHHHHHHhHHhhHhcccccCCchHHHHHHHHHHHHHHHHHHhhh---hHHHHHHHHHHHhhcccchhhh
Q 041759 113 SAFIKGLPAASHFTGCLLGIVFLATLADSSLGRKNLLFLSCLTMSVATSLTIFSN---NLWIYSLLRFFSGISRATIGTC 189 (525)
Q Consensus 113 s~~~~g~~~s~~~lg~~~~~~~~G~l~dr~~Grk~~~~~~~~~~~i~~~~~~~~~---~~~~l~~~r~l~G~~~~~~~~~ 189 (525)
+..+.+++.+...+|..+|+++.|+++|| +|||+.++++.++..+++++.++++ |++.++++|++.|++.|...+.
T Consensus 44 ~~~~~~~~~~~~~~g~~~G~~~~g~~~d~-~GRk~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~R~~~G~~~g~~~~~ 122 (451)
T PF00083_consen 44 SSLLSSLLTSSFFIGAIVGALIFGFLADR-YGRKPALIISALLMIIGSILIAFAPSYNNFWMLLIGRFLIGFGIGGAYVV 122 (451)
T ss_pred hHHHHHHHHHHHHhhhccccccccccccc-cccccccccccccccccccccccccccccccccccccccccccccccccc
Confidence 45678999999999999999999999999 9999999999999999999999999 9999999999999999999999
Q ss_pred hheeeEeeecCcchhhHHhHHHHHHHHHHHHHHHHHHhcc----CCchHHHHHHHHHHHHHHHhHhheeecCCchHhhhc
Q 041759 190 TIVLLTEKVGTEWRGLVGILDSFFFTIGTLTLPAIAYTNR----SSSWTIIYLWTSIPTLVYSGLLYIFVSESPRWLFMQ 265 (525)
Q Consensus 190 ~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~l~~~l~~~~~----~~~wr~~f~~~~~~~~~~~~~~~~~lpesp~~~~~~ 265 (525)
...++.|..|+++|++..++.+.+..+|.+++..++.... +.+||+.+.+.++++++.. +...++||||+|+..+
T Consensus 123 ~~~~~~E~~~~~~R~~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~Wr~~~~~~~~~~l~~~-~~~~~~pESP~wL~~~ 201 (451)
T PF00083_consen 123 SPIYISEIAPPKHRGFLSSLFQLFWALGILLASLIGYIVSYYSDNWGWRILLIFGAIPSLLVL-LLRFFLPESPRWLLSK 201 (451)
T ss_pred ccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccc-ccccccccccceeccc
Confidence 9999999999999999999999999999999988865442 2469999999999998877 7778999999999999
Q ss_pred CCHHHHHHHHHhhCCCcCCccchhhhhhhccCCCCcccccccccchhhhhhhhcchhHHHHHHHHHHHHHHH-----HHH
Q 041759 266 GRQEEAVEVIKSLSPIKDSNQLSLSLVSAVSFGHEPAASSKESSFLSSIRELFVRRWALERTLALMVPGFGI-----GVV 340 (525)
Q Consensus 266 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~-----~~~ 340 (525)
+|.+++++.+++..+ . +..+++..+..++.++.++++ ..++++++++..++..+..+...... ...
T Consensus 202 ~~~~~A~~~l~~~~~-~--~~~~~~~~~~~~~~~~~~~~~------~~~~~l~~~~~~~~~~~~~~~l~~~~~~~g~~~~ 272 (451)
T PF00083_consen 202 GRDEEAEKVLRKLRG-K--EIEDEEIEEIKAEKKESQESK------ASWRDLFRNKKYRKRLLIALLLQFFQQFSGINFI 272 (451)
T ss_pred ccccccccccccccc-c--ccccccccccccccccccccc------eeeeeccccccccccccccccccccccccccccc
Confidence 999999888877522 2 111111111111111111100 35667777755333444333333222 234
Q ss_pred HhhhhhcccccCChhH-HHHHHHHHhcccccccCchhHHHHHHHHHhhcChhHHHHHHHHHHHHHHHHH--Hhcccccc-
Q 041759 341 YYGMTLGIENLGFDIY-LGVVFNALLEIPNLASTIPSFFLTFFLIQKWNRKSSLLVLFIISGICSIMAV--VANDISNA- 416 (525)
Q Consensus 341 ~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~l~d~~g~~~~~~~~~~~~~~~~~~~~--~~~~~~~~- 416 (525)
.++.+.+.++.+.+.. ......++ ..+++.+++.++.||+|||++++.+..+++++.+.+. ........
T Consensus 273 ~~~~~~i~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~GRr~~~i~~~~~~~~~~~~~~~~~~~~~~~~~ 345 (451)
T PF00083_consen 273 FYYSPSIFENAGISNSFLATLILGL-------VNFLGTLLAIFLIDRFGRRKLLIIGLLLMAICSLILGIIFFLGVSSSS 345 (451)
T ss_pred ccccccccccccccccccccccccc-------cccccccccccccccccccccccccccccccccccccccccccccccc
Confidence 4455666666666655 22222222 3447777778999999999999999888888877664 11111010
Q ss_pred --chhHHHHHHHHHHHHHH-HHHHHHHhhhccccCcchhhhhhHHHHHHHHHHHHHHHHHHhhcc--CchhHHHHHHHHH
Q 041759 417 --GKRMRIGLELASLFSAY-IAYTVIFIYAIELFPTCVRNSATSIMRLAIIFAAIFSSVLVAAGS--NNEFVSYGVFGLV 491 (525)
Q Consensus 417 --~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~p~~~r~~~~~~~~~~~~~g~~~~p~i~~~~~--~~~~~~~~~~~~~ 491 (525)
.. ..+.+..+.....+ +..+..+.+..|.+|++.|+++.++....++++++++|.+..... .+....+.+++++
T Consensus 346 ~~~~-~~i~~~~l~~~~~~~g~~~~~~~~~~ElfPt~~R~~~~~~~~~~~~i~~~i~~~~~~~~~~~~~~~~~~~i~~~~ 424 (451)
T PF00083_consen 346 WWSI-LSIVFLALFFAFFSLGWGPLPWIYTAELFPTKVRSTGIGLSYAVGRIGGFIIPFLFPYLFNNLGGWGVFLIFAGV 424 (451)
T ss_pred cccc-ccceeeeeccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccchhhHHH
Confidence 12 22222222222222 344677789999999999999999999999999999888876422 2235566666666
Q ss_pred HHHHHH-HHHhccCCCCCCccchHHH
Q 041759 492 IICCGF-FVICLPETRGSSLCDTIDQ 516 (525)
Q Consensus 492 ~~~~~~-~~~~~~~~~~~~~~~~~~~ 516 (525)
+++..+ .++++||||+++++|.+++
T Consensus 425 ~~i~~i~~~~~lpET~g~~l~ei~~~ 450 (451)
T PF00083_consen 425 CLIAIIFVYFFLPETKGKTLEEIQEM 450 (451)
T ss_pred HHHHHhheeEEEeeCCCCCHHHHHhh
Confidence 555554 4577899999999887654
No 28
>TIGR00894 2A0114euk Na(+)-dependent inorganic phosphate cotransporter.
Probab=100.00 E-value=4e-32 Score=274.20 Aligned_cols=415 Identities=15% Similarity=0.112 Sum_probs=277.3
Q ss_pred HHHHHHHHHHHHHHHHHHhhhcccCccccccCCCCCCCCCCCCCCCCCCceecCCCCccccceeeccccccchhhhhhhH
Q 041759 41 QAILVSLASLFDSQQSFISVYTEAEPTWHCLNNTTCSSASNICMFPKSSWAWDGNPTTTALTIISEWGLECSSAFIKGLP 120 (525)
Q Consensus 41 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~c~~~~~~~~~~~~p~~~~~~i~~~~~~~~~s~~~~g~~ 120 (525)
+..++++++..+..|+.+.+.+.. |..+.++.+ +..|.. ..+|. ......|+++ +..+.|++
T Consensus 20 i~~~~~~~~~~~y~dr~~~~~a~~-----~~~~~~~~~-~~~~~~-------~~~~~--~~~~~~~~~~---s~~~~g~~ 81 (465)
T TIGR00894 20 LSFLLHICNVIIIAQRICLSLTMV-----AMVNKENST-DLACLS-------AENEL--DNIKNPNFKW---SGALQGLI 81 (465)
T ss_pred HHHHHHHHHHHHHHHHhhheEEEE-----EcccCCCCC-Cccccc-------ccccc--ccccCCCCCC---CHHHhhHH
Confidence 677788888889999999888721 111100000 011110 00111 2233448899 99999999
Q ss_pred HHHHHHHHHHhHHhhHhcccccCCchHHHHHHHHHHHHHHHHHHhh--hhHHHHHHHHHHHhhcccchhhhhheeeEeee
Q 041759 121 AASHFTGCLLGIVFLATLADSSLGRKNLLFLSCLTMSVATSLTIFS--NNLWIYSLLRFFSGISRATIGTCTIVLLTEKV 198 (525)
Q Consensus 121 ~s~~~lg~~~~~~~~G~l~dr~~Grk~~~~~~~~~~~i~~~~~~~~--~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~ 198 (525)
.+.+.+++.+++++.|+++|| +|||+++.++.++++++.+++.++ .+++.+++.|+++|++.+...+....++.|++
T Consensus 82 ~s~~~~~~~~~~~~~g~l~dr-~g~r~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~~~G~~~~~~~~~~~~~~~~~~ 160 (465)
T TIGR00894 82 LSSHFYGQIIIQIPVGYLAGK-YVFKWSIGIGMFLSSVISIVIPWAAGGGIALVVFCRVIQGLAQGSVSPATHKIIVKWA 160 (465)
T ss_pred HHHHHHHHHHHHcchHHHHHH-hCcchhhHHHHHHHHHHHHHHHHHHHcCchHHHHHHHHHHHhcccchhhHHHHHHhcC
Confidence 999999999999999999999 999999999999999998887554 56889999999999999999999999999999
Q ss_pred cCcchhhHHhHHHHHHHHHHHHHHHH-HHhccC-CchHHHHHHHHHHHHHHHhHhheeecCCchHhhhcCCHHHHHHHHH
Q 041759 199 GTEWRGLVGILDSFFFTIGTLTLPAI-AYTNRS-SSWTIIYLWTSIPTLVYSGLLYIFVSESPRWLFMQGRQEEAVEVIK 276 (525)
Q Consensus 199 ~~~~r~~~~~~~~~~~~~G~~l~~~l-~~~~~~-~~wr~~f~~~~~~~~~~~~~~~~~lpesp~~~~~~~~~~~~~~~~~ 276 (525)
|+++|++++++...+..+|.++++++ +.+... .+||+.|++.+++.++..++.+.+.+|+|+... +.++++. +..+
T Consensus 161 ~~~~r~~~~~~~~~~~~~g~~i~~~l~~~l~~~~~gw~~~f~i~~~~~~~~~~~~~~~~~~~p~~~~-~~~~~~~-~~i~ 238 (465)
T TIGR00894 161 PPKERSRLLGMSTSGFQLGTFIFLPISGWLCESWGGWPMIFYVFGIVGCAWSLLWFVFPADDPSIHP-CISKFEK-KYIN 238 (465)
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCeehhhhhHHHHHHHHHHHHHhcCCcccCC-CCCHHHH-HHHH
Confidence 99999999999999999999999988 555556 499999999999888877555556677764211 0011111 0000
Q ss_pred hhCCCcCCccchhhhhhhccCCCCcccccccccchhhhhhhhcchhHHHHHHHHHHHHHHHHHHHhhhhhcc-cccCChh
Q 041759 277 SLSPIKDSNQLSLSLVSAVSFGHEPAASSKESSFLSSIRELFVRRWALERTLALMVPGFGIGVVYYGMTLGI-ENLGFDI 355 (525)
Q Consensus 277 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~ 355 (525)
+. .+.++.+++. ...++++++++.++...+..+...........++|.++ +.+|.+.
T Consensus 239 ~~-----------------~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lp~~l~~~~g~s~ 296 (465)
T TIGR00894 239 SS-----------------LQGQKGSTRQ-----SLPIKAIPKSLPVWAIWFAIFGHFWLYTILPTYLPTFISWVLRVSG 296 (465)
T ss_pred hh-----------------cccccCCCCC-----CCCHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcCh
Confidence 00 0000000000 13578889998877766666555555544444455555 4578888
Q ss_pred HHHHHHHHHhcccccccCchhHHHHHHHHHhhcChhHH--------HHHHHHHHHHHHHHHHhccccccchhHHHHHHHH
Q 041759 356 YLGVVFNALLEIPNLASTIPSFFLTFFLIQKWNRKSSL--------LVLFIISGICSIMAVVANDISNAGKRMRIGLELA 427 (525)
Q Consensus 356 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~d~~g~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 427 (525)
...+...++..+ +.+++.++.|++.||+++|+.. ..+.........++...... .+....+++..+
T Consensus 297 ~~~g~~~~~~~~----~~~i~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~l 370 (465)
T TIGR00894 297 KENGLLSSLPYL----FAWLCSIFAGYLADFLKSSKTLSLTAARKIFNGIGGLGPGIFAYALPYLS--AAFYLTIIILTL 370 (465)
T ss_pred HHhHHHHHHHHH----HHHHHHHHHHHHHHHHHHcCCCcHHHHHHHHHHHHHHHHHHHHHHHHHcC--CchHHHHHHHHH
Confidence 888888777666 7779999999999997644211 11111111111111111111 112233334444
Q ss_pred HHHHHHHHHHHHHhhhccccCcchhhhhhHHHHHHHHHHHHHHHHHHhhcc-----CchhHHHHHHHHHHHHHHHHHHhc
Q 041759 428 SLFSAYIAYTVIFIYAIELFPTCVRNSATSIMRLAIIFAAIFSSVLVAAGS-----NNEFVSYGVFGLVIICCGFFVICL 502 (525)
Q Consensus 428 ~~~~~~~~~~~~~~~~~~~~p~~~r~~~~~~~~~~~~~g~~~~p~i~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~ 502 (525)
.+.+.+...+.......|..|+ .+|.+.++.+..+.+|++++|.+.|... ..+...|.+.+++.+++.++....
T Consensus 371 ~~~~~~~~~~~~~~~~~~~~~~-~~g~~~g~~~~~~~l~~~i~p~l~g~~~~~~~~~~~~~~f~~~~~~~~i~~i~~~~~ 449 (465)
T TIGR00894 371 ANAVSSGPLAGVLINSLDLAPR-FLGFIKGITGLPGFIGGLIASTLAGNILSQDSKNVWLIVFLIMAFVNILCVIFYLIF 449 (465)
T ss_pred HHHHhhhhhhhhhhchhhcChh-HHHHHHHHHHHHHHHHHHHHHHhhheeeCCCCchHHHHHHHHHHHHHHHHHHHeeee
Confidence 4444444455555566677776 7899999999999999999999998521 124566677777777766655544
Q ss_pred cCC
Q 041759 503 PET 505 (525)
Q Consensus 503 ~~~ 505 (525)
.+.
T Consensus 450 ~~~ 452 (465)
T TIGR00894 450 GSA 452 (465)
T ss_pred ecc
Confidence 433
No 29
>PRK15075 citrate-proton symporter; Provisional
Probab=100.00 E-value=1.7e-31 Score=266.81 Aligned_cols=348 Identities=14% Similarity=0.097 Sum_probs=236.0
Q ss_pred HHHHHHHHHHHHHHHHHHhhhcccCccccccCCCCCCCCCCCCCCCCCCceecCCCCccccceeeccccccchhhhhhhH
Q 041759 41 QAILVSLASLFDSQQSFISVYTEAEPTWHCLNNTTCSSASNICMFPKSSWAWDGNPTTTALTIISEWGLECSSAFIKGLP 120 (525)
Q Consensus 41 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~c~~~~~~~~~~~~p~~~~~~i~~~~~~~~~s~~~~g~~ 120 (525)
....++++++++.+|..++++. .|.+++|++. ++.+.+.+
T Consensus 16 ~~~~~~~~~~~~~~d~~~~~~~-------------------------------------~~~i~~~~~~---~~~~~~~~ 55 (434)
T PRK15075 16 AILRVTSGNFLEMFDFFLFGFY-------------------------------------ATAIAKTFFP---AGNEFASL 55 (434)
T ss_pred HHHHHHHHHHHHHHHHHHHHHH-------------------------------------HHHHHHHhCC---CCCchHHH
Confidence 5778888999999999999999 9999999998 77665543
Q ss_pred -HHHH-----HHHHHHhHHhhHhcccccCCchHHHHHHHHHHHHHHHHHHhhhhHH--------HHHHHHHHHhhcccch
Q 041759 121 -AASH-----FTGCLLGIVFLATLADSSLGRKNLLFLSCLTMSVATSLTIFSNNLW--------IYSLLRFFSGISRATI 186 (525)
Q Consensus 121 -~s~~-----~lg~~~~~~~~G~l~dr~~Grk~~~~~~~~~~~i~~~~~~~~~~~~--------~l~~~r~l~G~~~~~~ 186 (525)
.+.. .++..+++++.|+++|| +|||+.++.+.+++++++++++++++++ .++++|+++|++.+..
T Consensus 56 ~~~~~~~~~~~l~~~ig~~~~G~l~Dr-~Grr~~l~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~l~~~R~l~G~~~g~~ 134 (434)
T PRK15075 56 MLTFAVFGAGFLMRPLGAIVLGAYIDR-VGRRKGLIVTLSIMASGTLLIAFVPGYATIGLAAPLLVLLGRLLQGFSAGVE 134 (434)
T ss_pred HHHHHHHHHHHHHhhhHHHHHHHHhhh-hchHHHHHHHHHHHHHHHHHHHhCCcHHHHHHHHHHHHHHHHHHhhcccccc
Confidence 3332 22334789999999999 9999999999999999999999999987 4689999999999999
Q ss_pred hhhhheeeEeeecCcchhhHHhHHHHHHHHHHHHHHHHHHhc---------cCCchHHHHHHHHHHHHHHHhHhheeecC
Q 041759 187 GTCTIVLLTEKVGTEWRGLVGILDSFFFTIGTLTLPAIAYTN---------RSSSWTIIYLWTSIPTLVYSGLLYIFVSE 257 (525)
Q Consensus 187 ~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~l~~~l~~~~---------~~~~wr~~f~~~~~~~~~~~~~~~~~lpe 257 (525)
.+....+++|++|+++|++++++...+.++|..+++.++..+ ..+|||++|++..+...+.. ......||
T Consensus 135 ~~~~~~~~~e~~p~~~rg~~~~~~~~~~~~g~~~g~~~g~~l~~~~~~~~~~~~gWr~~f~~~~~~~~~~~-~~~~~~~e 213 (434)
T PRK15075 135 LGGVSVYLAEIATPGRKGFYTSWQSASQQVAVVFAALLGYLLNQWLSPAQMAEWGWRIPFLIGCLIVPFIF-LIRRSLEE 213 (434)
T ss_pred HHHHHHHHHhhCCcccchHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHHHHhccchHHHHHHHHHHHHHHH-HHHHhcCC
Confidence 999999999999999999999999988888888777765442 46799999997654432222 22223333
Q ss_pred CchHhhhcCCHHHHHHHHHhhCCCcCCccchhhhhhhccCCCCcccccccccchhhhhhhhcchhHHHHHHH-HHHHHHH
Q 041759 258 SPRWLFMQGRQEEAVEVIKSLSPIKDSNQLSLSLVSAVSFGHEPAASSKESSFLSSIRELFVRRWALERTLA-LMVPGFG 336 (525)
Q Consensus 258 sp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~-~~~~~~~ 336 (525)
++++.. + . + +. + .+ ..++...++++.+..... .+.....
T Consensus 214 ~~~~~~---------~----~-~-~~----------------~----~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~ 253 (434)
T PRK15075 214 TEEFLA---------R----K-H-RP----------------S----MR-----EIFRSLAANWRIVLAGMLMVAMTTVS 253 (434)
T ss_pred CHHHHH---------h----h-h-cc----------------c----cc-----cHHHHHHHhHHHHHHHHHHHHHHHHH
Confidence 321100 0 0 0 00 0 00 123333334332222111 1112222
Q ss_pred HHHHHhhhhhcccc-cCChhHHHHHHHHHhcccccccCchhHHHHHHHHHhhcChhHHHHHHHHHHHHHH-HHHHhcccc
Q 041759 337 IGVVYYGMTLGIEN-LGFDIYLGVVFNALLEIPNLASTIPSFFLTFFLIQKWNRKSSLLVLFIISGICSI-MAVVANDIS 414 (525)
Q Consensus 337 ~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~d~~g~~~~~~~~~~~~~~~~~-~~~~~~~~~ 414 (525)
.....+..|.++++ .|.+..+.........+ +.+++.++.|++.||+|||+.+..+..+..+... .+......
T Consensus 254 ~~~~~~~~p~~l~~~~g~~~~~~~~~~~~~~~----~~~~~~~~~g~l~Dr~g~r~~~~~~~~~~~~~~~~~~~~~~~~- 328 (434)
T PRK15075 254 FYLITVYTPTFGKTVLHLSAADSLLVTLCVGV----SNFIWLPIGGALSDRIGRRPVLIAFTVLAILTAYPALSWLVAA- 328 (434)
T ss_pred HHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHH----HHHHHHHHHHHHHHHhcchHHHHHHHHHHHHHHHHHHHHHHcC-
Confidence 33334445665554 78887766666555555 6668999999999999999988776555433222 11121111
Q ss_pred ccchhHHHHHHHHHHHHHHHHHHHHHhhhccccCcchhhhhhHHHHHHHH-HHHHHHHHHHhh
Q 041759 415 NAGKRMRIGLELASLFSAYIAYTVIFIYAIELFPTCVRNSATSIMRLAII-FAAIFSSVLVAA 476 (525)
Q Consensus 415 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~r~~~~~~~~~~~~-~g~~~~p~i~~~ 476 (525)
.+........++.+++.+...+..+.+..|.+|++.|+++.++.+.... +++.++|.+.+.
T Consensus 329 -~~~~~~~~~~~~~~~~~g~~~~~~~~~~~e~~p~~~rg~~~g~~~~~~~~~~g~~~p~~~g~ 390 (434)
T PRK15075 329 -PSFARMLAVELWLSFLYGSYNGAMVVALTEVMPAEVRTAGFSLAYSLATAIFGGFTPAISTW 390 (434)
T ss_pred -CchHHHHHHHHHHHHHHHHHHhhHHHHHHHHCCCCccchheeHHHHHHHHHHhhhHHHHHHH
Confidence 1122222333444455566666677888999999999999999766554 457788988874
No 30
>TIGR00891 2A0112 putative sialic acid transporter.
Probab=100.00 E-value=8.4e-32 Score=267.64 Aligned_cols=369 Identities=12% Similarity=0.087 Sum_probs=262.9
Q ss_pred HHHHHHHHHHHHHHHHHHHhhhcccCccccccCCCCCCCCCCCCCCCCCCceecCCCCccccceeeccccccchhhhhhh
Q 041759 40 EQAILVSLASLFDSQQSFISVYTEAEPTWHCLNNTTCSSASNICMFPKSSWAWDGNPTTTALTIISEWGLECSSAFIKGL 119 (525)
Q Consensus 40 ~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~c~~~~~~~~~~~~p~~~~~~i~~~~~~~~~s~~~~g~ 119 (525)
+.+..+.++++.+.++....+.. .|.+++++|+ +..+.|+
T Consensus 12 ~~~~~~~~~~~~~~~~~~~~~~~-------------------------------------~~~l~~~~~~---s~~~~g~ 51 (405)
T TIGR00891 12 NAFSAAWLGWLLDAFDFFLVALV-------------------------------------LAEVAGEFGL---TTVDAAS 51 (405)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHH-------------------------------------HHHHHHHhCC---ChhhHHH
Confidence 35778888999999999999999 9999999999 9999999
Q ss_pred HHHHHHHHHHHhHHhhHhcccccCCchHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHhhcccchhhhhheeeEeeec
Q 041759 120 PAASHFTGCLLGIVFLATLADSSLGRKNLLFLSCLTMSVATSLTIFSNNLWIYSLLRFFSGISRATIGTCTIVLLTEKVG 199 (525)
Q Consensus 120 ~~s~~~lg~~~~~~~~G~l~dr~~Grk~~~~~~~~~~~i~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~ 199 (525)
+.+++.++..+++++.|+++|| +|||++++++.++.+++.++++++++++.+++.|++.|++.+...+...+++.|++|
T Consensus 52 ~~~~~~~~~~~~~~~~G~l~Dr-~g~r~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~G~~~~~~~~~~~~~i~~~~~ 130 (405)
T TIGR00891 52 LISAALISRWFGALMFGLWGDR-YGRRLPMVTSIVLFSAGTLACGFAPGYITMFIARLVIGIGMGGEYGSSAAYVIESWP 130 (405)
T ss_pred HHHHHHHHHHHHHHHHHHHHHH-hccHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHhhhhhhhHHHHHHHHHhCC
Confidence 9999999999999999999999 999999999999999999999999999999999999999999999999999999999
Q ss_pred CcchhhHHhHHHHHHHHHHHHHHHHHH-hccCCc--hHHHHHHHHHHHHHHHhHhheeecCCchHhhhcCCHHHHHHHHH
Q 041759 200 TEWRGLVGILDSFFFTIGTLTLPAIAY-TNRSSS--WTIIYLWTSIPTLVYSGLLYIFVSESPRWLFMQGRQEEAVEVIK 276 (525)
Q Consensus 200 ~~~r~~~~~~~~~~~~~G~~l~~~l~~-~~~~~~--wr~~f~~~~~~~~~~~~~~~~~lpesp~~~~~~~~~~~~~~~~~ 276 (525)
+++|+++.++.+.+..+|.++++.++. +....+ ||+.|++.+++.++.. +....+||++++...+++.++.++..+
T Consensus 131 ~~~~~~~~~~~~~~~~~g~~~~~~l~~~l~~~~~~~w~~~f~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~ 209 (405)
T TIGR00891 131 KHLRNKASGLLISGYAVGAVVAAQVYSLVVPVWGDGWRALFFISILPIIFAL-WLRKNIPEAEDWKEKHAGKALVRTMVD 209 (405)
T ss_pred hhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHhcCccHHHHHHHHHHHHHHHH-HHHHhCCCChhHHHHhhhhhhhhhHHH
Confidence 999999999999999999999998844 444344 9999998777666655 556677887654322211111111111
Q ss_pred hhCCCcCCccchhhhhhhccCCCCcccccccccchhhhhhhhcchh--HHHHHHHHHHHHHHHHHHHhhhh-hcccccCC
Q 041759 277 SLSPIKDSNQLSLSLVSAVSFGHEPAASSKESSFLSSIRELFVRRW--ALERTLALMVPGFGIGVVYYGMT-LGIENLGF 353 (525)
Q Consensus 277 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~--~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~ 353 (525)
+..+ ++ +.. + ...++. ....++..+++. +........+............| ++.++.|.
T Consensus 210 ~~~~--~~-~~~----~------~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~ 271 (405)
T TIGR00891 210 ILYG--GE-HRI----A------NIVMTL-----AAAMVQSAGKRWPTFVYLVVLVLFANLYSHPIQDLLPTYLKADLGL 271 (405)
T ss_pred HHhc--cc-hhh----h------hhhhhh-----hHHhhhhhhhhhHHHHHHHHHHHHHHHHHhhhhhhhHHHHHHHhCC
Confidence 1100 00 000 0 000000 001111111111 00111111111111112222233 33445788
Q ss_pred hhHHHHHHHHHhcccccccCchhHHHHHHHHHhhcChhHHHHHHHHHHHHHHHHHHhccccccchhHHHHHHHHHHHHHH
Q 041759 354 DIYLGVVFNALLEIPNLASTIPSFFLTFFLIQKWNRKSSLLVLFIISGICSIMAVVANDISNAGKRMRIGLELASLFSAY 433 (525)
Q Consensus 354 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~d~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 433 (525)
+..+.+.+.+...+ +.+++.++.+++.||++||+.+.++..+..+........... .....+..++.+++..
T Consensus 272 s~~~~~~~~~~~~~----~~~~g~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~ 343 (405)
T TIGR00891 272 SPHTVANIVVFSNI----GAIVGGCVFGFLGDWLGRRKAYVCSLLAGQLLIIPVFAIGAN----VAVLGLGLFFQQMLVQ 343 (405)
T ss_pred CHHHHHHHHHHHHH----HHHHHHHHHHHHHHHhCchhhhHHHHHHHHHHHHHHHHhCCc----hHHHHHHHHHHHHHHc
Confidence 88887777777666 777999999999999999998888776654433332222222 2233344345555555
Q ss_pred HHHHHHHhhhccccCcchhhhhhHHHHHHHHHHHHHHHHHHhh
Q 041759 434 IAYTVIFIYAIELFPTCVRNSATSIMRLAIIFAAIFSSVLVAA 476 (525)
Q Consensus 434 ~~~~~~~~~~~~~~p~~~r~~~~~~~~~~~~~g~~~~p~i~~~ 476 (525)
..++....++.|.+|++.|++++|+.+....+|..++|.+.|.
T Consensus 344 ~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~~g~~~~g~ 386 (405)
T TIGR00891 344 GIWGILPKHLGEYFPTDQRAAGLGFTYQLGNLGGALAPIIGAL 386 (405)
T ss_pred cchhhHHHHHhhhCCcchhHHHhhHHHHHHHHHHHHHHHHHHH
Confidence 6667778889999999999999999999999999999999985
No 31
>TIGR00895 2A0115 benzoate transport.
Probab=100.00 E-value=7e-32 Score=267.52 Aligned_cols=375 Identities=20% Similarity=0.263 Sum_probs=272.7
Q ss_pred HHHHHHHHHHHHHHHHHHhhhcccCccccccCCCCCCCCCCCCCCCCCCceecCCCCccccceeeccccccchhhhhhhH
Q 041759 41 QAILVSLASLFDSQQSFISVYTEAEPTWHCLNNTTCSSASNICMFPKSSWAWDGNPTTTALTIISEWGLECSSAFIKGLP 120 (525)
Q Consensus 41 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~c~~~~~~~~~~~~p~~~~~~i~~~~~~~~~s~~~~g~~ 120 (525)
.+....+..+..+++.....+. .|.+.+++|. +..+.+++
T Consensus 18 ~~~~~~~~~~~~~~~~~~~~~~-------------------------------------~~~~~~~~~~---~~~~~~~~ 57 (398)
T TIGR00895 18 AIILSFLIMLMDGYDLAAMGFA-------------------------------------APAISAEWGL---DPVQLGFL 57 (398)
T ss_pred HHHHHHHHHHHHHHHHHHHHhh-------------------------------------HHHHhhccCC---CHHHHHHH
Confidence 4555666677777777777777 8999999999 99999999
Q ss_pred HHHHHHHHHHhHHhhHhcccccCCchHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHhhcccchhhhhheeeEeeecC
Q 041759 121 AASHFTGCLLGIVFLATLADSSLGRKNLLFLSCLTMSVATSLTIFSNNLWIYSLLRFFSGISRATIGTCTIVLLTEKVGT 200 (525)
Q Consensus 121 ~s~~~lg~~~~~~~~G~l~dr~~Grk~~~~~~~~~~~i~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~ 200 (525)
.+.+.++..+++++.|+++|| +|||+++..+.++.+++.++..++++++.+++.|++.|++.+...+...+++.|++|+
T Consensus 58 ~~~~~~~~~~~~~~~g~l~d~-~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~ 136 (398)
T TIGR00895 58 FSAGLIGMAFGALFFGPLADR-IGRKRVLLWSILLFSVFTLLCALATNVTQLLILRFLAGLGLGGLMPNLNALVSEYAPK 136 (398)
T ss_pred HHHHHHHHHHHHHHhHHHHHH-hhhHHHHHHHHHHHHHHHHHHHHccchHHHHHHHHHHhcccccchhhHHHHHHHHcCH
Confidence 999999999999999999999 9999999999999999999999999999999999999999999999999999999999
Q ss_pred cchhhHHhHHHHHHHHHHHHHHHH-HHhccCCchHHHHHHHHHHHHHHHhHhheeecCCchHhhhcCCHHHHHHHHHhhC
Q 041759 201 EWRGLVGILDSFFFTIGTLTLPAI-AYTNRSSSWTIIYLWTSIPTLVYSGLLYIFVSESPRWLFMQGRQEEAVEVIKSLS 279 (525)
Q Consensus 201 ~~r~~~~~~~~~~~~~G~~l~~~l-~~~~~~~~wr~~f~~~~~~~~~~~~~~~~~lpesp~~~~~~~~~~~~~~~~~~~~ 279 (525)
++|++++++...+..+|..+++.+ +.+....+||+.|++.++..++..++...++||++++...+ +.++..+..++..
T Consensus 137 ~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~ 215 (398)
T TIGR00895 137 RFRGTAVGLMFCGYPIGAAVGGFLAGWLIPVFGWRSLFYVGGIAPLLLLLLLMRFLPESIDFLVSK-RPETVRRIVNAIA 215 (398)
T ss_pred HhhchhHhhHhhHHHHHHHHHHHHHHHHhhcccceeehhhhhhHHHHHHHHHHHhCCCCChHHHhc-CHHHHHHHHHHHH
Confidence 999999999999999999999988 56667789999999987666666656777889988765433 3333222222221
Q ss_pred CCcCCccchhhhhhhccCCCCcccccccccchhhhhhhhcchhHHHHH---HHHHHHHHHHHHHHhhhhhcccccCChhH
Q 041759 280 PIKDSNQLSLSLVSAVSFGHEPAASSKESSFLSSIRELFVRRWALERT---LALMVPGFGIGVVYYGMTLGIENLGFDIY 356 (525)
Q Consensus 280 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 356 (525)
. ....+... +..+ +.++++ ......+.+++++..+... ...++............|++.++.+.+..
T Consensus 216 ~-~~~~~~~~---~~~~---~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~ 285 (398)
T TIGR00895 216 P-QMQAEAQS---ALPE---QKATQG---TKRSVFKALFQGKTARITVLLWLLYFMLLVGVYFLTNWLPKLMVELGFSLS 285 (398)
T ss_pred H-hccccccc---cccc---cccccc---hhhHHHHHHhcchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHH
Confidence 1 11000000 0000 000000 0011222333333222211 11112222223333445666777888887
Q ss_pred HHHHHHHHhcccccccCchhHHHHHHHHHhhcChhHHHHHHHHHHHHHHHHHHhccccccchhHHHHHHHHHHHHHHHHH
Q 041759 357 LGVVFNALLEIPNLASTIPSFFLTFFLIQKWNRKSSLLVLFIISGICSIMAVVANDISNAGKRMRIGLELASLFSAYIAY 436 (525)
Q Consensus 357 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~d~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 436 (525)
..+.......+ +.+++.++.+++.||+++|+.. .+..+..+...++...... ........++.+++.+...
T Consensus 286 ~~~~~~~~~~~----~~~~~~~~~~~l~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~g~~~~~~~ 356 (398)
T TIGR00895 286 LAATGGALFNF----GGVIGSIIFGWLADRLGPRVTA-LLLLLGAVFAVLVGSTLFS----PTLLLLLGAIAGFFVNGGQ 356 (398)
T ss_pred HHHHHHHHHHH----HHHHHHHHHHHHHhhcchHHHH-HHHHHHHHHHHHHHHHhhC----HHHHHHHHHHHHHHHHHHH
Confidence 77777777666 7779999999999999998444 3334444433333332222 2345666777888888888
Q ss_pred HHHHhhhccccCcchhhhhhHHHHHHHHHHHHHHHHHHhh
Q 041759 437 TVIFIYAIELFPTCVRNSATSIMRLAIIFAAIFSSVLVAA 476 (525)
Q Consensus 437 ~~~~~~~~~~~p~~~r~~~~~~~~~~~~~g~~~~p~i~~~ 476 (525)
+...++..|.+|++.|+++.|+.+....+|..++|.+.|.
T Consensus 357 ~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~g~~~~G~ 396 (398)
T TIGR00895 357 SGLYALMALFYPTAIRATGVGWAIGIGRLGAIIGPILAGY 396 (398)
T ss_pred HHHHHHHhhcCCHHHHHHHHHHHHHHHHHHHHHHHHhHHh
Confidence 9999999999999999999999999999999999999874
No 32
>PRK10213 nepI ribonucleoside transporter; Reviewed
Probab=100.00 E-value=1.1e-30 Score=257.11 Aligned_cols=336 Identities=11% Similarity=0.078 Sum_probs=249.6
Q ss_pred ccceeeccccccchhhhhhhHHHHHHHHHHHhHHhhHhcccccCCchHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHH
Q 041759 100 ALTIISEWGLECSSAFIKGLPAASHFTGCLLGIVFLATLADSSLGRKNLLFLSCLTMSVATSLTIFSNNLWIYSLLRFFS 179 (525)
Q Consensus 100 ~~~i~~~~~~~~~s~~~~g~~~s~~~lg~~~~~~~~G~l~dr~~Grk~~~~~~~~~~~i~~~~~~~~~~~~~l~~~r~l~ 179 (525)
+|++.+++|+ ++.+.|+..+++.++..+++++.|+++|| +|||++++.+.++.+++.++++++++++.+++.|+++
T Consensus 43 l~~~~~~~g~---s~~~~g~~~~~~~~~~~~~~~~~g~l~Dr-~grr~~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~ 118 (394)
T PRK10213 43 LTPMAQDLGI---SEGVAGQSVTVTAFVAMFASLFITQTIQA-TDRRYVVILFAVLLTLSCLLVSFANSFSLLLIGRACL 118 (394)
T ss_pred HHHHHHHcCC---CHHHHHHHHHHHHHHHHHHHHHHHHHhcc-cCcHHHHHHHHHHHHHHHHHHHHHChHHHHHHHHHHH
Confidence 7889999999 99999999999999999999999999999 9999999999999999999999999999999999999
Q ss_pred hhcccchhhhhheeeEeeecCcchhhHHhHHHHHHHHHHHHHHHHH-HhccCCchHHHHHHHHHHHHHHHhHhheeecCC
Q 041759 180 GISRATIGTCTIVLLTEKVGTEWRGLVGILDSFFFTIGTLTLPAIA-YTNRSSSWTIIYLWTSIPTLVYSGLLYIFVSES 258 (525)
Q Consensus 180 G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~l~~~l~-~~~~~~~wr~~f~~~~~~~~~~~~~~~~~lpes 258 (525)
|++.+...+...+++.|++|+++|+++.++...+.++|.+++|.++ .+.+.++||+.|++.+++.++..+.....+||+
T Consensus 119 G~~~g~~~~~~~~~i~~~~~~~~~~~a~~~~~~~~~~g~~ig~~l~~~l~~~~gw~~~f~~~~~l~~~~~l~~~~~~p~~ 198 (394)
T PRK10213 119 GLALGGFWAMSASLTMRLVPPRTVPKALSVIFGAVSIALVIAAPLGSFLGELIGWRNVFNAAAVMGVLCIFWIIKSLPSL 198 (394)
T ss_pred HHhhHHHHHHHHHHHHHHcCHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHHHHHHCCCC
Confidence 9999999999999999999999999999999999999999999995 455667999999998887776553444445664
Q ss_pred chHhhhcCCHHHHHHHHHhhCCCcCCccchhhhhhhccCCCCcccccccccchhhhhhhhcchhHHHHHHHHHHHHHHHH
Q 041759 259 PRWLFMQGRQEEAVEVIKSLSPIKDSNQLSLSLVSAVSFGHEPAASSKESSFLSSIRELFVRRWALERTLALMVPGFGIG 338 (525)
Q Consensus 259 p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~ 338 (525)
|+. + ++ . ....++.+++|.++...+..+.......
T Consensus 199 ~~~-----~-~~----------------------------------~-----~~~~~~~l~~~~~~~~~~~~~~~~~~~~ 233 (394)
T PRK10213 199 PGE-----P-SH----------------------------------Q-----KQNTFRLLQRPGVMAGMIAIFMSFAGQF 233 (394)
T ss_pred Ccc-----c-cc----------------------------------c-----hhHHHHHhcCHHHHHHHHHHHHHHHHHH
Confidence 310 0 00 0 0134467778876665444333333332
Q ss_pred -HHHhhhhhcccccCChhHHHHHHHHHhcccccccCchhHHHHHHHHHhhcChhHHHHHHHHHHHHHHHHHHhccccccc
Q 041759 339 -VVYYGMTLGIENLGFDIYLGVVFNALLEIPNLASTIPSFFLTFFLIQKWNRKSSLLVLFIISGICSIMAVVANDISNAG 417 (525)
Q Consensus 339 -~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~d~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 417 (525)
...+..|.+.+++|.+....+.......+ +.+++.++.+++.||.+ |+.+..+..+.....+++......
T Consensus 234 ~~~~~~~p~~~~~~g~s~~~~g~~~~~~~~----~~iig~~~~~~l~~r~~-~~~l~~~~~~~~~~~~~l~~~~~~---- 304 (394)
T PRK10213 234 AFFTYIRPVYMNLAGFGVDGLTLVLLSFGI----ASFVGTSLSSFILKRSV-KLALAGAPLVLAVSALVLTLWGSD---- 304 (394)
T ss_pred HHHHHHHHHHHHhcCCChhHHHHHHHHHHH----HHHHHHHHHHHHHhccc-hhHHHHHHHHHHHHHHHHHHHhhh----
Confidence 22344577777788888777776666666 67789999999999954 444444434333332232222222
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHhhhccccCcchhhhhhHHHHHHHHHHHHHHHHHHhh--ccCchhHHHHHHHHHHHH
Q 041759 418 KRMRIGLELASLFSAYIAYTVIFIYAIELFPTCVRNSATSIMRLAIIFAAIFSSVLVAA--GSNNEFVSYGVFGLVIIC 494 (525)
Q Consensus 418 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~r~~~~~~~~~~~~~g~~~~p~i~~~--~~~~~~~~~~~~~~~~~~ 494 (525)
.+......++.+++.+...+...+++.+..|+ .++...+.......+|..++|.+.|. +..+....+...+++.++
T Consensus 305 ~~~~~~~~~l~G~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~lg~~~G~~l~G~l~~~~g~~~~~~~~~~~~~~ 382 (394)
T PRK10213 305 KIVATGVAIIWGLTFALVPVGWSTWITRSLAD-QAEKAGSIQVAVIQLANTCGAAIGGYALDNIGLTSPLMLSGTLMLL 382 (394)
T ss_pred HHHHHHHHHHHHHHHHhhhHHHHHHHHHHCcc-cHHHHHHHHHHHHHHHHHHHHHHHHHHHhccChhhHHHHHHHHHHH
Confidence 23455566777788887778888788888874 45677777777888999999999995 333444455554444333
No 33
>PRK05122 major facilitator superfamily transporter; Provisional
Probab=100.00 E-value=5e-31 Score=261.19 Aligned_cols=347 Identities=16% Similarity=0.134 Sum_probs=247.4
Q ss_pred ccc-eeeccccccchhhhhhhHHHHHHHHHHHhHHhhHhcccccCCchHHHHHHHHHHHHHHHHHHhh--------hhHH
Q 041759 100 ALT-IISEWGLECSSAFIKGLPAASHFTGCLLGIVFLATLADSSLGRKNLLFLSCLTMSVATSLTIFS--------NNLW 170 (525)
Q Consensus 100 ~~~-i~~~~~~~~~s~~~~g~~~s~~~lg~~~~~~~~G~l~dr~~Grk~~~~~~~~~~~i~~~~~~~~--------~~~~ 170 (525)
+|. +++++|+ +..+.|++.+++.+++.+++++.|+++|| +|||++++.+.++.+++.+.+.++ .+++
T Consensus 38 l~~~i~~~~g~---s~~~~g~~~~~~~~~~~i~~~~~G~l~Dr-~g~r~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 113 (399)
T PRK05122 38 LPGYVHDQLGF---SAFLAGLVISLQYLATLLSRPHAGRYADT-LGPKKAVVFGLCGCALSGLLYLLAGLLAAWPVLSLL 113 (399)
T ss_pred HHHHHHHhcCc---cHHHHHHHHHHHHHHHHHhchhhHhHHhc-cCCcchHHHHHHHHHHHHHHHHHhhhhhccchhHHH
Confidence 665 6789999 99999999999999999999999999999 999999999999988877766543 2577
Q ss_pred HHHHHHHHHhhcccchhhhhheeeEeeecCcchhhHHhHHHHHHHHHHHHHHHHH-HhccCCchHHHHHHHHHHHHHHHh
Q 041759 171 IYSLLRFFSGISRATIGTCTIVLLTEKVGTEWRGLVGILDSFFFTIGTLTLPAIA-YTNRSSSWTIIYLWTSIPTLVYSG 249 (525)
Q Consensus 171 ~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~l~~~l~-~~~~~~~wr~~f~~~~~~~~~~~~ 249 (525)
.+++.|+++|++.+...+...+++.|++|+++|++++++...+..+|.++++.++ .+....|||+.+++.++..++..
T Consensus 114 ~l~~~r~l~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~g~~l~~~l~~~~g~~~~~~~~~~~~~~~~- 192 (399)
T PRK05122 114 LLLLGRLLLGIGESLAGTGSILWGIGRVGALHTGRVISWNGIATYGALAIGAPLGVLLYHWGGLAGLGLLIMLLALLGL- 192 (399)
T ss_pred HHHHHHHHHHhhHHhhcchHHHHHHhhcChhhhccchhhhhhhhhHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHH-
Confidence 8999999999999999999999999999999999999999999999999999984 55677899999888777665544
Q ss_pred HhheeecCCchHhhhcCCHHHHHHHHHhhCCCcCCccchhhhhhhccCCCCcccccccccchhhhhhhhcchhHHHHHHH
Q 041759 250 LLYIFVSESPRWLFMQGRQEEAVEVIKSLSPIKDSNQLSLSLVSAVSFGHEPAASSKESSFLSSIRELFVRRWALERTLA 329 (525)
Q Consensus 250 ~~~~~lpesp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~ 329 (525)
+.....|+++. ++.+ + .++++.+++ .+.....
T Consensus 193 ~~~~~~~~~~~-----~~~~------------------------------------~-----~~~~~~~~~--~~~~~~~ 224 (399)
T PRK05122 193 LLARPRPAVPP-----VKGE------------------------------------R-----LPFRRVLGR--VWPYGMG 224 (399)
T ss_pred HHHhcCCCCCC-----CCcc------------------------------------c-----hhHHHHHHH--HHHHHHH
Confidence 33322232210 0000 0 011222221 1111111
Q ss_pred HHHHHHHHHHHHhhhhhcccccCChhHHHHHHHHHhcccccccCchhHHHHHHHHHhhcChhHHHHHHHHHHHHHHHHHH
Q 041759 330 LMVPGFGIGVVYYGMTLGIENLGFDIYLGVVFNALLEIPNLASTIPSFFLTFFLIQKWNRKSSLLVLFIISGICSIMAVV 409 (525)
Q Consensus 330 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~d~~g~~~~~~~~~~~~~~~~~~~~~ 409 (525)
..+............+.+..+.+.+ ..........+ +.+++.++.+++.||+++|+.+..+..+..++.+++..
T Consensus 225 ~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~----~~~~~~~~~g~l~~r~~~~~~~~~~~~~~~~~~~~~~~ 298 (399)
T PRK05122 225 LALASIGFGTIATFITLYYAARGWD--GAALALTLFGV----AFVGARLLFGNLINRLGGLRVAIVSLLVEILGLLLLWL 298 (399)
T ss_pred HHHHHHHHHHHHHHHHHHHHHcccc--cchHHHHHHHH----HHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHH
Confidence 1122222222222334444444442 22223333333 55588899999999999999988888877777766655
Q ss_pred hccccccchhHHHHHHHHHHHHHHHHHHHHHhhhccccCcchhhhhhHHHHHHHHHHHHHHHHHHhh--ccCchhHHHHH
Q 041759 410 ANDISNAGKRMRIGLELASLFSAYIAYTVIFIYAIELFPTCVRNSATSIMRLAIIFAAIFSSVLVAA--GSNNEFVSYGV 487 (525)
Q Consensus 410 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~r~~~~~~~~~~~~~g~~~~p~i~~~--~~~~~~~~~~~ 487 (525)
..+. ...++..++.+++.+..++.......|..|++.|+++.++.+....+|..++|.+.|. ...++...+.+
T Consensus 299 ~~~~-----~~~~~~~~l~G~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~~~~~~g~l~~~~g~~~~~~~ 373 (399)
T PRK05122 299 APSP-----WMALIGAALTGFGFSLVFPALGVEAVKRVPPQNRGAALGAYSVFLDLSLGITGPLAGLVASWFGYPSIFLA 373 (399)
T ss_pred hccH-----HHHHHHHHHHHHhHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCHHHHHHH
Confidence 4332 3455566777777777777777778889999999999999999999999888888874 33456777777
Q ss_pred HHHHHHHHHHHHHhccCCCCCCc
Q 041759 488 FGLVIICCGFFVICLPETRGSSL 510 (525)
Q Consensus 488 ~~~~~~~~~~~~~~~~~~~~~~~ 510 (525)
.+++.+++.++.++++++++++.
T Consensus 374 ~~~~~~~~~~~~~~~~~~~~~~~ 396 (399)
T PRK05122 374 AALAALLGLALTWLLYRRAPRAV 396 (399)
T ss_pred HHHHHHHHHHHHHHhcccccccC
Confidence 77777777766666655554443
No 34
>KOG0252 consensus Inorganic phosphate transporter [Inorganic ion transport and metabolism]
Probab=100.00 E-value=7.5e-34 Score=262.82 Aligned_cols=423 Identities=19% Similarity=0.235 Sum_probs=300.1
Q ss_pred HHHHHHHHHHHHHHHHHHhhhcccCccccccCCCCCCCCCCCCCCCCCCceecCCCCccccceeecc--------ccccc
Q 041759 41 QAILVSLASLFDSQQSFISVYTEAEPTWHCLNNTTCSSASNICMFPKSSWAWDGNPTTTALTIISEW--------GLECS 112 (525)
Q Consensus 41 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~c~~~~~~~~~~~~p~~~~~~i~~~~--------~~~~~ 112 (525)
.+.+...+.++|++|.++++.+ .|-+...+ ++
T Consensus 42 ~i~iAG~GfftDsYDlF~I~lV-------------------------------------t~il~~lY~~~~~~~g~~--- 81 (538)
T KOG0252|consen 42 AIIIAGMGFFTDSYDLFSISLV-------------------------------------TKILGYLYYHGDESGGHY--- 81 (538)
T ss_pred HHHHhhhhhcccchhhhhHHHH-------------------------------------HHHHHHHhcCCCCCCCcC---
Confidence 6788889999999999998887 33332222 23
Q ss_pred hhhhhhhHHHHHHHHHHHhHHhhHhcccccCCchHHHHHHHHHHHHHHHHHHhhh-------hHHHHHHHHHHHhhcccc
Q 041759 113 SAFIKGLPAASHFTGCLLGIVFLATLADSSLGRKNLLFLSCLTMSVATSLTIFSN-------NLWIYSLLRFFSGISRAT 185 (525)
Q Consensus 113 s~~~~g~~~s~~~lg~~~~~~~~G~l~dr~~Grk~~~~~~~~~~~i~~~~~~~~~-------~~~~l~~~r~l~G~~~~~ 185 (525)
++...+.+..+..+|..+||++.|+++|| +|||+++...+++..+++++++++. -.+++.+.|++.|+|.|+
T Consensus 82 ps~i~~~Vn~~A~vGti~GQl~FG~lgD~-~GRK~vYG~~liImIi~t~~~~~s~~~~~~~~~m~~L~~~R~~LGiGIGG 160 (538)
T KOG0252|consen 82 PSGVLALVNAAALVGTIFGQLFFGWLGDK-FGRKKVYGKELIIMIICSALSGLSVGTTSPLGVMMTLCFFRFLLGIGIGG 160 (538)
T ss_pred CchHHHHHHHHHHHHHHHHHHHHHHHHhh-hcchhhhhHHHHHHHHHHHHhccCCCCCCCcchhhHHHHHHHHhhccccC
Confidence 56778899999999999999999999999 9999999999999999999888753 267899999999999999
Q ss_pred hhhhhheeeEeeecCcchhhHHhHHHHHHHHHHHHHHHHHHhcc----------------CCchHHHHHHHHHHHHHHHh
Q 041759 186 IGTCTIVLLTEKVGTEWRGLVGILDSFFFTIGTLTLPAIAYTNR----------------SSSWTIIYLWTSIPTLVYSG 249 (525)
Q Consensus 186 ~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~l~~~l~~~~~----------------~~~wr~~f~~~~~~~~~~~~ 249 (525)
-+|.+.+..+|...+++||...+..-+..+.|.+.|.+++.++. +.-||..+.+.++++++.+
T Consensus 161 DYPlSAtI~SE~an~~~RGa~iaavFa~Qg~GilaG~ivt~Iv~~~fe~~~~~~~~~~~ld~vWRl~~glg~vpa~~~l- 239 (538)
T KOG0252|consen 161 DYPLSATIMSESANKKTRGAFIAAVFAMQGFGILAGGIVALIVSAIFEKIFNGPSTYPHLDGVWRIIFGLGAVPALLVL- 239 (538)
T ss_pred CCcchHHHhhhhhhhccccceeEEEEEecchhHhhccHHHHHHHHHHhccCCCCCCchHHHHHHHHHHHHHHHHHHHHH-
Confidence 99999999999999999999999888888888887776654431 1349999999999999988
Q ss_pred HhheeecCCchHhhhcC-CHHHHHHHHHhhCCCcCCccchhhhhhhccCCCCcccccccccchhhhhhhhcchhHHHHHH
Q 041759 250 LLYIFVSESPRWLFMQG-RQEEAVEVIKSLSPIKDSNQLSLSLVSAVSFGHEPAASSKESSFLSSIRELFVRRWALERTL 328 (525)
Q Consensus 250 ~~~~~lpesp~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~ 328 (525)
...+.+|||+++-.... +.+.+. .+. +++.+......++. ....+.+......+...+..+ .-+.++
T Consensus 240 y~Rl~M~Et~~Y~al~~~~~~~a~---~d~-----~k~~~~~~~~~~~~---~~~~~~~~~~~~~F~~~f~~~-hg~~Ll 307 (538)
T KOG0252|consen 240 YFRLKMPETARYTALVSKKLKQAA---GDM-----KKVLSVDIEAESTA---ESDVPPPSNSFGLFSRLFLRW-HGKHLL 307 (538)
T ss_pred HhhhcCCcchhHHHHhhcCHhhhh---hcc-----ccccccccchhhcc---ccCCCCcccccchHHHHHHHH-HHHHHH
Confidence 88899999998753222 222222 111 11111100000000 000011111112344444444 346778
Q ss_pred HHHHHHHHHHHHHhhhhhccc----ccCChhHHHHH----HHHHh-cccccccCchhHHHHHHHHHhhcChhHHHHHHHH
Q 041759 329 ALMVPGFGIGVVYYGMTLGIE----NLGFDIYLGVV----FNALL-EIPNLASTIPSFFLTFFLIQKWNRKSSLLVLFII 399 (525)
Q Consensus 329 ~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~----~~~~~-~~~~~~~~~~~~~~~~~l~d~~g~~~~~~~~~~~ 399 (525)
.....|+.....+|...++.. .+|..+..... ..+.. .+....+.++|..+...++|++|||+..+.++.+
T Consensus 308 gt~~~WFllDiafy~~nL~~s~I~~~ig~~~~~~~~~~~~~vA~~~~iia~~~~vPGyw~tv~~id~iGRk~iq~~GF~~ 387 (538)
T KOG0252|consen 308 GTAGTWFLLDIAFYGQNLFQSVIFSAIGVIPSANTYHELFKVAEGNLIIAVCSTVPGYWFTVYFIDIIGRKYIQLMGFFI 387 (538)
T ss_pred HHHHHHHhhhhhhhccccHHHHHHHhhccCCCcchHHHHHHHHHHHHHHHHHccCCceeEEEEEeehhhhHHHHHhhHHH
Confidence 888888888877777655443 23332211111 11111 1111125557888999999999999999999999
Q ss_pred HHHHHHHHHHhccccccchhHHHHHHHHHHHHHHHHHHHHHhhhccccCcchhhhhhHHHHHHHHHHHHHHHHHHhhc--
Q 041759 400 SGICSIMAVVANDISNAGKRMRIGLELASLFSAYIAYTVIFIYAIELFPTCVRNSATSIMRLAIIFAAIFSSVLVAAG-- 477 (525)
Q Consensus 400 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~r~~~~~~~~~~~~~g~~~~p~i~~~~-- 477 (525)
+.+..+.+....+.........+...+...++..+.......+.+|.+|.+.|+++.|+....+-.|++++.......
T Consensus 388 ~~i~~~~~~~~y~~~~~~~Gf~v~y~l~~ff~NFGPn~ttfivpaE~FParvR~t~hGIsAA~GK~GAivg~~~F~~~t~ 467 (538)
T KOG0252|consen 388 MTIFFFVIAGPYNQLENTIGFVVLYSLTFFFGNFGPNATTFIVPAEIFPARVRSTCHGISAASGKAGAIVGAFGFLYLTD 467 (538)
T ss_pred HHHHHHHHcCCcccccccCceeehHHHHHHHHhcCCCceeEEeehhhchHHHhhhhhhHHHHhccchHHHHHHHhhHhhh
Confidence 999999888776631111112222222333333344456778889999999999999999999999999998888742
Q ss_pred -----cCchhHHHHHHHHHHHHHHHHHHhccCCCCCCccchHHHh
Q 041759 478 -----SNNEFVSYGVFGLVIICCGFFVICLPETRGSSLCDTIDQR 517 (525)
Q Consensus 478 -----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 517 (525)
..+....+++++++++++.++.+++||+++|++++..++.
T Consensus 468 ~~yp~~~g~~~v~~i~~~~~~~gi~~T~l~pEtk~~~leei~~e~ 512 (538)
T KOG0252|consen 468 HNYPPNIGVRNVFIILAGCMLLGILFTLLIPETKGKSLEEISNEE 512 (538)
T ss_pred ccCCccccchHHHHHHHHHHHHhHheeEEeecccccCHHHhcChh
Confidence 3356788999999999999999999999999988775443
No 35
>PRK10504 putative transporter; Provisional
Probab=100.00 E-value=4.9e-31 Score=267.02 Aligned_cols=376 Identities=13% Similarity=0.127 Sum_probs=279.0
Q ss_pred HHHHHHHHHHHHHHHHHHhhhcccCccccccCCCCCCCCCCCCCCCCCCceecCCCCccccceeeccccccchhhhhhhH
Q 041759 41 QAILVSLASLFDSQQSFISVYTEAEPTWHCLNNTTCSSASNICMFPKSSWAWDGNPTTTALTIISEWGLECSSAFIKGLP 120 (525)
Q Consensus 41 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~c~~~~~~~~~~~~p~~~~~~i~~~~~~~~~s~~~~g~~ 120 (525)
.+++++++.++..++....... .|.+.+++|. +..+.+++
T Consensus 11 ~~~~~~~~~~~~~~~~~~~~~~-------------------------------------~p~~~~~~g~---s~~~~~~~ 50 (471)
T PRK10504 11 QLWIVAFGFFMQSLDTTIVNTA-------------------------------------LPSMAQSLGE---SPLHMHMV 50 (471)
T ss_pred HHHHHHHHHHHHHHhHHHHHHH-------------------------------------HHHHHHHhCc---CHHHHHHH
Confidence 4667778888888888888878 8999999999 99999999
Q ss_pred HHHHHHHHHHhHHhhHhcccccCCchHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHhhcccchhhhhheeeEeeecC
Q 041759 121 AASHFTGCLLGIVFLATLADSSLGRKNLLFLSCLTMSVATSLTIFSNNLWIYSLLRFFSGISRATIGTCTIVLLTEKVGT 200 (525)
Q Consensus 121 ~s~~~lg~~~~~~~~G~l~dr~~Grk~~~~~~~~~~~i~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~ 200 (525)
.+.+.++..++.+++|+++|| +|||++++.+.++.+++.+++.++++++.++++|+++|++.+...+...+++.|++|+
T Consensus 51 ~~~~~~~~~~~~~~~g~l~d~-~g~r~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~g~~~~~~~~~~~~~~~~~~~~ 129 (471)
T PRK10504 51 IVSYVLTVAVMLPASGWLADR-VGVRNIFFTAIVLFTLGSLFCALSGTLNELLLARVLQGVGGAMMVPVGRLTVMKIVPR 129 (471)
T ss_pred HHHHHHHHHHHHHHHHHHHHH-hchHHHHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHhhhHHHHHHHHHHHHHHcCH
Confidence 999999999999999999999 9999999999999999999999999999999999999999999999999999999999
Q ss_pred cchhhHHhHHHHHHHHHHHHHHHH-HHhccCCchHHHHHHHHHHHHHHHhHhheeecCCchHhhhcCCHHHHHHHHH---
Q 041759 201 EWRGLVGILDSFFFTIGTLTLPAI-AYTNRSSSWTIIYLWTSIPTLVYSGLLYIFVSESPRWLFMQGRQEEAVEVIK--- 276 (525)
Q Consensus 201 ~~r~~~~~~~~~~~~~G~~l~~~l-~~~~~~~~wr~~f~~~~~~~~~~~~~~~~~lpesp~~~~~~~~~~~~~~~~~--- 276 (525)
++|+++.++.....++|..++|.+ +.+.+..+||+.|.+..+...+..++.....|+.+. .+.+.+.......
T Consensus 130 ~~~~~~~~~~~~~~~~g~~~g~~~~g~l~~~~gw~~~f~~~~~~~~l~~~~~~~~~~~~~~---~~~r~~~~~~~~~~~~ 206 (471)
T PRK10504 130 EQYMAAMTFVTLPGQVGPLLGPALGGLLVEYASWHWIFLINIPVGIIGAIATLMLMPNYTM---QTRRFDLSGFLLLAVG 206 (471)
T ss_pred HHHHHHHHHHHHHHHHHHHhhhHHHHHHHhhccHHHHHHHHHHHHHHHHHHHHHhCCCccc---cCCCCChHHHHHHHHH
Confidence 999999999999999999999998 556667899999999887777666455555555431 1111111110000
Q ss_pred ----h--hCCCcCCcc-chhhhh------------hhccCCCCcccccccccchhhhhhhhcchhHHHHHHHHHHHHHHH
Q 041759 277 ----S--LSPIKDSNQ-LSLSLV------------SAVSFGHEPAASSKESSFLSSIRELFVRRWALERTLALMVPGFGI 337 (525)
Q Consensus 277 ----~--~~~~~~~~~-~~~~~~------------~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~ 337 (525)
. ... .+... ...... ...++.... ++ ..+ .+++++|.++..+...++.....
T Consensus 207 ~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~-----~~~-~~l~~~~~~~~~l~~~~~~~~~~ 277 (471)
T PRK10504 207 MATLTLALDG-SKGLGLSPLAIAGLVAVGVVALLLYLLHARNNN--RA-----LFS-LKLFRTRTFSLGLAGSFAGRIGS 277 (471)
T ss_pred HHHHHHHHhc-CCcCCcchHHHHHHHHHHHHHHHHHHHHHhcCC--CC-----ccC-HHHhcccchHHHHHHHHHHHHHH
Confidence 0 000 00000 000000 000000000 00 012 24788888777666666666666
Q ss_pred HHHHhhhhhcccc-cCChhHHHHHHHHHhcccccccCchhHHHHHHHHHhhcChhHHHHHHHHHHHHHHHHHHhcccccc
Q 041759 338 GVVYYGMTLGIEN-LGFDIYLGVVFNALLEIPNLASTIPSFFLTFFLIQKWNRKSSLLVLFIISGICSIMAVVANDISNA 416 (525)
Q Consensus 338 ~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~d~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 416 (525)
....+..|++.+. .|.+....+.......+ +.+++.++.+++.||+|+|+.+..+..+..+...++.+.... .
T Consensus 278 ~~~~~~~~~~~~~~~g~~~~~~g~~~~~~~~----~~~~~~~~~~~l~~r~g~~~~~~~~~~~~~~~~~~~~~~~~~--~ 351 (471)
T PRK10504 278 GMLPFMTPVFLQIGLGFSPFHAGLMMIPMVL----GSMGMKRIVVQVVNRFGYRRVLVATTLGLALVSLLFMLVALL--G 351 (471)
T ss_pred HHHHHHHHHHHHHHcCCCHHHHHHHHHHHHH----HHHHHHHHHHHHHHHcCchHHHHHHHHHHHHHHHHHHhcccc--c
Confidence 6666667777764 78887777766655555 566777889999999999999998888887776666554322 1
Q ss_pred chhHHHHHHHHHHHHHHHHHHHHHhhhccccCcchhhhhhHHHHHHHHHHHHHHHHHHh
Q 041759 417 GKRMRIGLELASLFSAYIAYTVIFIYAIELFPTCVRNSATSIMRLAIIFAAIFSSVLVA 475 (525)
Q Consensus 417 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~r~~~~~~~~~~~~~g~~~~p~i~~ 475 (525)
+........++.+++.+..++....+..+..|++.++.+.++.++...+|..++|.+.|
T Consensus 352 ~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~g~~ig~~i~g 410 (471)
T PRK10504 352 WYYLLPFVLFLQGMVNSTRFSSMNTLTLKDLPDNLASSGNSLLSMIMQLSMSIGVTIAG 410 (471)
T ss_pred cHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCHHhccchHHHHHHHHHHHHHHHHHHHH
Confidence 12223334555567777777888888889999999999999999999999999988877
No 36
>TIGR00710 efflux_Bcr_CflA drug resistance transporter, Bcr/CflA subfamily. This subfamily of drug efflux proteins, a part of the major faciliator family, is predicted to have 12 membrane-spanning regions. Members with known activity include Bcr (bicyclomycin resistance protein) in E. coli, Flor (chloramphenicol and florfenicol resistance) in Salmonella typhimurium DT104, and CmlA (chloramphenicol resistance) in Pseudomonas sp. plasmid R1033.
Probab=100.00 E-value=1.4e-30 Score=257.02 Aligned_cols=345 Identities=18% Similarity=0.221 Sum_probs=256.8
Q ss_pred ccceeeccccccchhhhhhhHHHHHHHHHHHhHHhhHhcccccCCchHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHH
Q 041759 100 ALTIISEWGLECSSAFIKGLPAASHFTGCLLGIVFLATLADSSLGRKNLLFLSCLTMSVATSLTIFSNNLWIYSLLRFFS 179 (525)
Q Consensus 100 ~~~i~~~~~~~~~s~~~~g~~~s~~~lg~~~~~~~~G~l~dr~~Grk~~~~~~~~~~~i~~~~~~~~~~~~~l~~~r~l~ 179 (525)
.|.+.+++|. ++.+.+++.+++.++..+++++.|+++|| +|||+++..+.++.+++.++.+++++++.+++.|++.
T Consensus 28 ~p~~~~~~g~---s~~~~g~~~~~~~~~~~~~~~~~g~l~d~-~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 103 (385)
T TIGR00710 28 FPEIAADLST---PASIVQMTLTLYLLGFAAGQLLWGPLSDR-YGRRPVLLLGLFIFALSSLGLALSNNIETLLVLRFVQ 103 (385)
T ss_pred HHHHHHHhCC---CHHHHHHHHHHHHHHHHHHHHhhhhHHHh-cCChHHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHH
Confidence 8999999999 99999999999999999999999999999 9999999999999999999999999999999999999
Q ss_pred hhcccchhhhhheeeEeeecCcchhhHHhHHHHHHHHHHHHHHHHH-HhccCCchHHHHHHHHHHHHHHHhHhheeecCC
Q 041759 180 GISRATIGTCTIVLLTEKVGTEWRGLVGILDSFFFTIGTLTLPAIA-YTNRSSSWTIIYLWTSIPTLVYSGLLYIFVSES 258 (525)
Q Consensus 180 G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~l~~~l~-~~~~~~~wr~~f~~~~~~~~~~~~~~~~~lpes 258 (525)
|++.+...+...+++.|++|+++|+++.++.+....+|..+++.++ .+.+..+||+.|++.++..++..+..+++.||+
T Consensus 104 g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 183 (385)
T TIGR00710 104 AFGASAGSVISQALVRDIYPGEELSRIYSILMPVLALAPAVAPLLGGYILVWLSWHAIFAFLSLAGILLSALIFFILPET 183 (385)
T ss_pred HcchhHHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHhCCCC
Confidence 9999999999999999999999999999999999999999999884 455667999999998888777765555666775
Q ss_pred chHhhhcCCHHHHHHHHHhhCCCcCCccchhhhhhhccCCCCcccccccccchhhhhhhhcchhHHHHHHHHHHHHHHHH
Q 041759 259 PRWLFMQGRQEEAVEVIKSLSPIKDSNQLSLSLVSAVSFGHEPAASSKESSFLSSIRELFVRRWALERTLALMVPGFGIG 338 (525)
Q Consensus 259 p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~ 338 (525)
++. +++ ++.++ ....+++++++|+++...+...+......
T Consensus 184 ~~~---~~~-~~~~~------------------------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 223 (385)
T TIGR00710 184 LPY---EAR-IQIST------------------------------------YFETFLLLLKSKMFWGYALIYGASFGGFF 223 (385)
T ss_pred CCC---ccc-CCHHH------------------------------------HHHHHHHHHcCchhHHHHHHHHHHHHHHH
Confidence 421 000 00000 01245667788876655554444333333
Q ss_pred HHHhhhhhcc-cccCChhHHHHHHHHHhcccccccCchhHHHHHHHHHhhcChhHHHHHHHHHHHHHHHHHHhccccccc
Q 041759 339 VVYYGMTLGI-ENLGFDIYLGVVFNALLEIPNLASTIPSFFLTFFLIQKWNRKSSLLVLFIISGICSIMAVVANDISNAG 417 (525)
Q Consensus 339 ~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~d~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 417 (525)
......|.+. ++.|.++...+.......+ +.+++.++.+++.||+++|+.+..+..+..++.+++..........
T Consensus 224 ~~~~~~~~~~~~~~g~~~~~~g~~~~~~~~----~~~~~~~~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 299 (385)
T TIGR00710 224 AFFSGAPFVYIDIMGVSPSVFGLLFALNII----AMIFGGFLNGRFIKKWGAKSLLRMGLILFAVSAVLLEITAILGLGS 299 (385)
T ss_pred HHHHcChHHHHHHcCCCHHHHHHHHHHHHH----HHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHhccch
Confidence 3333345444 4678888877777776666 7779999999999999999988888777777666555432210012
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHhhhccccCcchhhhhhHHHHHHHHHHHHHHHHHHhhccCchhHHHHHHHHHHH
Q 041759 418 KRMRIGLELASLFSAYIAYTVIFIYAIELFPTCVRNSATSIMRLAIIFAAIFSSVLVAAGSNNEFVSYGVFGLVII 493 (525)
Q Consensus 418 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~r~~~~~~~~~~~~~g~~~~p~i~~~~~~~~~~~~~~~~~~~~ 493 (525)
+.......++.+++.+...+.......|..| +.++++.++.+.....++.+.+.+.+...+.....+..++....
T Consensus 300 ~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~-~~~g~~~~~~~~~~~~~g~i~~~~~~~~~~~~~~~~~~~~~~~~ 374 (385)
T TIGR00710 300 WAMIIGPMMFVGIGNSMISSIAMAYALEDFP-HVAGTASALFGTLRLVLGAIVGYLVSLIHGNTAWPMSLSCLVLA 374 (385)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhccCc-ccchHHHHHHHHHHHHHHHHHHHHHHhccccChHHHHHHHHHHH
Confidence 3334445566677777788888888888887 46899999988887654444444444433333444444444333
No 37
>PRK15402 multidrug efflux system translocase MdfA; Provisional
Probab=100.00 E-value=2e-30 Score=257.39 Aligned_cols=329 Identities=13% Similarity=0.093 Sum_probs=248.2
Q ss_pred ccceeeccccccchhhhhhhHHHHHHHHHHHhHHhhHhcccccCCchHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHH
Q 041759 100 ALTIISEWGLECSSAFIKGLPAASHFTGCLLGIVFLATLADSSLGRKNLLFLSCLTMSVATSLTIFSNNLWIYSLLRFFS 179 (525)
Q Consensus 100 ~~~i~~~~~~~~~s~~~~g~~~s~~~lg~~~~~~~~G~l~dr~~Grk~~~~~~~~~~~i~~~~~~~~~~~~~l~~~r~l~ 179 (525)
+|.+.+++|+ +..+.++..+.+.+++.+++++.|+++|| +|||++++++.++.+++.++..++++++.+++.|+++
T Consensus 36 ~~~~~~~~~~---s~~~~~~~~~~~~~~~~~~~~~~G~l~dr-~g~r~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~ 111 (406)
T PRK15402 36 MLAVVEDFNA---GAEWVPTSMTAYLAGGMFLQWLLGPLSDR-IGRRPVMLAGVAFFILTCLAILLAQSIEQFTLLRFLQ 111 (406)
T ss_pred hHHHHHHhCC---CHHHHHHHHHHHHHHHHHHHHHHHHHHHH-hCChHHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHH
Confidence 8899999999 99999999999999999999999999999 9999999999999999999999999999999999999
Q ss_pred hhcccchhhhhheeeEeeecCcchhhHHhHHHHHHHHHHHHHHHH-HHhccCCchHHHHHHHHHHHHHHHhHhheeecCC
Q 041759 180 GISRATIGTCTIVLLTEKVGTEWRGLVGILDSFFFTIGTLTLPAI-AYTNRSSSWTIIYLWTSIPTLVYSGLLYIFVSES 258 (525)
Q Consensus 180 G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~l~~~l-~~~~~~~~wr~~f~~~~~~~~~~~~~~~~~lpes 258 (525)
|++.+...+...+++.|++|+++|.+..++......+|..++|.+ +.+.+..+||+.|++.++..++..+..++.+||+
T Consensus 112 G~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~g~~i~~~l~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~ 191 (406)
T PRK15402 112 GIGLCFIGAVGYAAIQESFEEADAIKITALMANVALLAPLLGPLVGAALIHVLPWRGMFVLFAALAALSFFGLWRAMPET 191 (406)
T ss_pred HhHhhhHHHHHHHHHHHHhChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccCccHHHHHHHHHHHHHHHHHHHhCCCC
Confidence 999998888889999999999999999999988888999999988 4555667999999998888877764555566775
Q ss_pred chHhhhcCCHHHHHHHHHhhCCCcCCccchhhhhhhccCCCCcccccccccchhhhhhhhcchhHHHHHHHHHHHHHHHH
Q 041759 259 PRWLFMQGRQEEAVEVIKSLSPIKDSNQLSLSLVSAVSFGHEPAASSKESSFLSSIRELFVRRWALERTLALMVPGFGIG 338 (525)
Q Consensus 259 p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~ 338 (525)
++.. ++..+. ++ ...++++++++|.++...+...+......
T Consensus 192 ~~~~---~~~~~~----~~--------------------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 232 (406)
T PRK15402 192 AGRV---GEKLSL----KE--------------------------------LGRDYKLVLKNRRFVAGALALGLVSLPLL 232 (406)
T ss_pred Cccc---cccccH----HH--------------------------------HHHHHHHHHcCcHHHHHHHHHHHHHHHHH
Confidence 4210 000000 00 01356678888876655544443333222
Q ss_pred HHHhhhhhc-ccccCChhHHHHHHHHHhcccccccCchhHHHHHHHHHhhcChhHHHHHHHHHHHHHHHHHHhccccccc
Q 041759 339 VVYYGMTLG-IENLGFDIYLGVVFNALLEIPNLASTIPSFFLTFFLIQKWNRKSSLLVLFIISGICSIMAVVANDISNAG 417 (525)
Q Consensus 339 ~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~d~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 417 (525)
......|.+ .+.++.+....+.......+ +.+++.++.+++.||+++|+.+.++.++..++.+++..........
T Consensus 233 ~~~~~~p~~~~~~~g~~~~~~g~~~~~~~~----~~~~g~~~~g~l~~r~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~ 308 (406)
T PRK15402 233 AWIALSPVILISGEQLSSYEYGLLQVPVFG----ALIAGNLTLARLTSRRPLRSLIRMGLWPMVAGLLLAALATVISSHA 308 (406)
T ss_pred HHHHHhHHHHHHHhCCCHHHHHHHHHHHHH----HHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHccccc
Confidence 222223444 34577777666655444444 5668899999999999999999888887777766665543111112
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHhhhccccCcchhhhhhHHHHHHHHHHHHHHHHHHhh
Q 041759 418 KRMRIGLELASLFSAYIAYTVIFIYAIELFPTCVRNSATSIMRLAIIFAAIFSSVLVAA 476 (525)
Q Consensus 418 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~r~~~~~~~~~~~~~g~~~~p~i~~~ 476 (525)
+....+..++.+++.+...+......... +++.+++..+..+....+|..+++.+.+.
T Consensus 309 ~~~~~~~~~~~g~g~~~~~~~~~~~~~~~-~~~~~g~~~~~~~~~~~~~~~~g~~~~~~ 366 (406)
T PRK15402 309 YLWLTAGLSLYAFGIGLANAGLYRLTLFS-SDVSKGTVSAAMGMLSMLIFTVGIELSKH 366 (406)
T ss_pred HHHHHHHHHHHHHHHHHHhhhHHHHHhhh-ccccccHHHHHHHHHHHHHHHHHHHHHHh
Confidence 33455566667777776666555554443 34789999999999999999999999985
No 38
>PLN00028 nitrate transmembrane transporter; Provisional
Probab=100.00 E-value=2.6e-31 Score=267.55 Aligned_cols=355 Identities=13% Similarity=0.081 Sum_probs=243.2
Q ss_pred ccceeeccccccchhhhhhhHHHHHHHHHHHhHHhhHhcccccCCchHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHH
Q 041759 100 ALTIISEWGLECSSAFIKGLPAASHFTGCLLGIVFLATLADSSLGRKNLLFLSCLTMSVATSLTIFSNNLWIYSLLRFFS 179 (525)
Q Consensus 100 ~~~i~~~~~~~~~s~~~~g~~~s~~~lg~~~~~~~~G~l~dr~~Grk~~~~~~~~~~~i~~~~~~~~~~~~~l~~~r~l~ 179 (525)
.|.+.+|+|+ +..+.+++.+.+.+++.+++++.|+++|| +|||+++..+.++++++.++++++++++.+++.|++.
T Consensus 59 ~~~l~~~~gl---s~~~~g~~~~~~~~~~~~~~~~~G~l~dr-~G~r~~~~~~~~~~~~~~~~~~~~~s~~~l~~~r~l~ 134 (476)
T PLN00028 59 LPIIRDNLNL---TKSDIGNAGIASVSGSIFSRLAMGPVCDL-YGPRYGSAFLLMLTAPAVFCMSLVSSATGFIAVRFFI 134 (476)
T ss_pred HHHHHHHcCC---CHHHHHHHHHHHHHHHHHHHHHHHHHHHH-hCChHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHH
Confidence 8899999999 99999999999999999999999999999 9999999999999999999999999999999999999
Q ss_pred hhcccchhhhhheeeEeeecCcchhhHHhHHHHHHHHHHHHHHHHHH----hc-c-----CCchHHHHHHHHHHHHHHHh
Q 041759 180 GISRATIGTCTIVLLTEKVGTEWRGLVGILDSFFFTIGTLTLPAIAY----TN-R-----SSSWTIIYLWTSIPTLVYSG 249 (525)
Q Consensus 180 G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~l~~~l~~----~~-~-----~~~wr~~f~~~~~~~~~~~~ 249 (525)
|++.+... ....+++|++|+++|++++++.....++|..+++.+.. .+ . ..|||+.|++.+++.++..+
T Consensus 135 G~~~~~~~-~~~~~i~~~~~~~~rg~a~g~~~~~~~~g~~~~~~~~~~i~~~~~~~~~~~~~gWr~~f~i~g~l~l~~~l 213 (476)
T PLN00028 135 GFSLATFV-SCQYWMSTMFNGKIVGTANGIAAGWGNLGGGVTQLLMPLVFPLIKDAGAPSFTAWRIAFFVPGLLHIIMGI 213 (476)
T ss_pred HHHHHhhH-HHHHHHHHhcChhheeHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcchhhhHHHHHHHHHHHHHHHH
Confidence 99988643 45567899999999999999998777777766654422 11 1 24899999999998887774
Q ss_pred HhheeecCCchHhhhcCCHHHHHHHHHhhCCCcCCccchhhhhhhccCCCCcccccccccchhhhhhhhcchhHHHHHHH
Q 041759 250 LLYIFVSESPRWLFMQGRQEEAVEVIKSLSPIKDSNQLSLSLVSAVSFGHEPAASSKESSFLSSIRELFVRRWALERTLA 329 (525)
Q Consensus 250 ~~~~~lpesp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~ 329 (525)
+.+++.++.|+ ++.++.+ + ..+ .++ .+....+++.+++++.+...+.
T Consensus 214 ~~~~~~~~~p~-----~~~~~~~-------~-~~~-------------~~~-------~~~~~~~~~~~~~~~~~~~~~~ 260 (476)
T PLN00028 214 LVLTLGQDLPD-----GNYRELK-------K-SGT-------------MPK-------DSFSKVLRYGVTNYRTWILALT 260 (476)
T ss_pred HHHHHcCcCCC-----CchhhHH-------h-cCc-------------ccc-------ccHHHHHHHHHcCchhHHHHHH
Confidence 44443344332 1100000 0 000 000 0001245666777775544433
Q ss_pred HHHHHHHHHHHHhhhhhc-ccccCChhHHHHHHHHHhcccccccCchhHHHHHHHHHhhcChh-------HHHHHHHHHH
Q 041759 330 LMVPGFGIGVVYYGMTLG-IENLGFDIYLGVVFNALLEIPNLASTIPSFFLTFFLIQKWNRKS-------SLLVLFIISG 401 (525)
Q Consensus 330 ~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~d~~g~~~-------~~~~~~~~~~ 401 (525)
.+.............|.+ .++.|.+...++....+..+ +.+++.++.|+++||++||+ ...+...+.+
T Consensus 261 ~~~~~~~~~~~~~~~p~~l~~~~g~s~~~a~~~~~~~~~----~~~ig~~~~G~lsDr~~~r~~~~~r~~~~~~~~~l~~ 336 (476)
T PLN00028 261 YGYSFGVELTMDNIIAEYFYDRFGLSLETAGAIAASFGL----MNLFARPAGGYLSDVAARRFGMRGRLWALWIVQTLGG 336 (476)
T ss_pred HHHHHHHHHHHHhHHHHHHHHhcCCCHHHHHHHHHHHHH----HHHHHHhhhHHHHHHHHHhcCcchhHHHHHHHHHHHH
Confidence 322222222222223443 45578888888888777777 77799999999999998652 2222222222
Q ss_pred HHHHHHHHhccccccchhHHHHHHHHHHHHHHHHHHHHHhhhccccCcchhhhhhHHHHHHHHHHHHHHHHHHhhc-cCc
Q 041759 402 ICSIMAVVANDISNAGKRMRIGLELASLFSAYIAYTVIFIYAIELFPTCVRNSATSIMRLAIIFAAIFSSVLVAAG-SNN 480 (525)
Q Consensus 402 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~r~~~~~~~~~~~~~g~~~~p~i~~~~-~~~ 480 (525)
+..+++.... . .....+.+++.+++.+...+..+.+..+..| +.++++.|+.+..+.+|++++|.+.+.. ..+
T Consensus 337 i~~~~~~~~~-~----~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~-~~~g~~~g~~~~~g~lg~~i~~~l~~~~~~~~ 410 (476)
T PLN00028 337 VFCIWLGRAN-S----LGAAIVVMILFSIFVQAACGATFGIVPFVSR-RSLGVISGLTGAGGNVGAVLTQLLFFTGSSYS 410 (476)
T ss_pred HHHHHhcccc-h----HHHHHHHHHHHHHHHHHhhhhhcccCcccCh-hhchhhhhhhhccccHHHHHHHHHHHhcCCcc
Confidence 2222222111 1 2233444455555555566667777777655 6789999999988899999999887743 234
Q ss_pred hhHHHHHHHHHHHHHHHHHHhc
Q 041759 481 EFVSYGVFGLVIICCGFFVICL 502 (525)
Q Consensus 481 ~~~~~~~~~~~~~~~~~~~~~~ 502 (525)
+...|.+.+++.+++.++.+++
T Consensus 411 y~~~f~~~~~~~~i~~~~~~~~ 432 (476)
T PLN00028 411 TETGISLMGVMIIACTLPVAFI 432 (476)
T ss_pred HhhHHHHHHHHHHHHHHHHHhe
Confidence 6777888887777777766655
No 39
>PRK10489 enterobactin exporter EntS; Provisional
Probab=100.00 E-value=2.7e-31 Score=264.39 Aligned_cols=364 Identities=13% Similarity=0.051 Sum_probs=269.2
Q ss_pred ccceeeccccccchhhhhhhHHHHHHHHHHHhHHhhHhcccccCCchHHHHHHHHHHHHHHHHHHh-----hhhHHHHHH
Q 041759 100 ALTIISEWGLECSSAFIKGLPAASHFTGCLLGIVFLATLADSSLGRKNLLFLSCLTMSVATSLTIF-----SNNLWIYSL 174 (525)
Q Consensus 100 ~~~i~~~~~~~~~s~~~~g~~~s~~~lg~~~~~~~~G~l~dr~~Grk~~~~~~~~~~~i~~~~~~~-----~~~~~~l~~ 174 (525)
.|.+.++++. +..+.|++.+.+.++..+++++.|+++|| +|||+++..+.++.+++.++.+. .++++.+++
T Consensus 40 ~~~~~~~~~~---s~~~~g~~~~~~~l~~~~~~~~~G~l~dr-~g~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 115 (417)
T PRK10489 40 VPVQIQMMTG---STLQVGLSVTLTGGAMFIGLMVGGVLADR-YDRKKLILLARGTCGLGFIGLALNAFLPEPSLLAIYL 115 (417)
T ss_pred HHHHHHHHHC---CHHHHHHHHHHHHHHHHHHHHhhHHHhhh-cCCceEEEehHHHHHHHHHHHHHHHHcCCCcHHHHHH
Confidence 7778888888 99999999999999999999999999999 99999999988888877665542 567899999
Q ss_pred HHHHHhhcccchhhhhheeeEeeecCcchhhHHhHHHHHHHHHHHHHHHHH-HhccCCchHHHHHHHHHHHHHHHhHhhe
Q 041759 175 LRFFSGISRATIGTCTIVLLTEKVGTEWRGLVGILDSFFFTIGTLTLPAIA-YTNRSSSWTIIYLWTSIPTLVYSGLLYI 253 (525)
Q Consensus 175 ~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~l~~~l~-~~~~~~~wr~~f~~~~~~~~~~~~~~~~ 253 (525)
.|++.|++.+...+...+++.|+.|+++|+++.++.....++|.++||.++ .+....+|++.|++.++..++.. +..+
T Consensus 116 ~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~l~g~l~~~~~~~~~~~~~~~~~~~~~-~~~~ 194 (417)
T PRK10489 116 LGLWDGFFGSLGVTALLAATPALVGRENLMQAGAITMLTVRLGSVISPALGGLLIAAGGVAWNYGLAAAGTFITL-LPLL 194 (417)
T ss_pred HHHHHHHHHHHHHHHHhhhhhhccCHHHHHHHHHHHHHHHhHHHHhHHHHHHHHHHHHhhHHHHHHHHHHHHHHH-HHHH
Confidence 999999999988888899999999999999999999999999999999985 44556689999998887777666 5555
Q ss_pred eecCCchHhhhcCCHHHHHHHHHhhCCCcCCccchhhhhhhccCCCCcccccccccchhhhhhhhcchhHHHHHHHHHHH
Q 041759 254 FVSESPRWLFMQGRQEEAVEVIKSLSPIKDSNQLSLSLVSAVSFGHEPAASSKESSFLSSIRELFVRRWALERTLALMVP 333 (525)
Q Consensus 254 ~lpesp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~ 333 (525)
.+||+++. +++.++. .++ ....++.++++|.++...+..++.
T Consensus 195 ~l~~~~~~---~~~~~~~---~~~--------------------------------~~~~~~~~~~~~~~~~~~~~~~~~ 236 (417)
T PRK10489 195 RLPALPPP---PQPREHP---LRS--------------------------------LLAGFRFLLASPVVGGIALLGGLL 236 (417)
T ss_pred hCCCCCCC---Ccccccc---hHH--------------------------------HHHHHHHHHcChHHHHHHHHHHHH
Confidence 66765321 0000000 000 002455677777755544443333
Q ss_pred HHHHHHHHhhhhhcccc-cCChhHHHHHHHHHhcccccccCchhHHHHHHHHHhhcChhHHHHHHHHHHHHHHHHHHhcc
Q 041759 334 GFGIGVVYYGMTLGIEN-LGFDIYLGVVFNALLEIPNLASTIPSFFLTFFLIQKWNRKSSLLVLFIISGICSIMAVVAND 412 (525)
Q Consensus 334 ~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~d~~g~~~~~~~~~~~~~~~~~~~~~~~~ 412 (525)
.... ......|.+.++ .|.+....+.+.+...+ +.+++.++.+++.||.++++.+..+..+.+++.+++...++
T Consensus 237 ~~~~-~~~~~~p~~~~~~~g~~~~~~g~~~~~~~~----g~~ig~~~~~~l~~~~~~~~~l~~~~~~~~~~~~~~~~~~~ 311 (417)
T PRK10489 237 TMAS-AVRVLYPALADEVWQMGAAQIGLLYAAVPL----GAALGALTSGWLAHSARPGLLMLLSTLGSFLAVGLFGLMPM 311 (417)
T ss_pred HHHH-hHHHhhHHHHHhccCCChhHhHHHHHHHHH----HHHHHHHHHHHhhhccCcchHHHHHHHHHHHHHHHHHccch
Confidence 2222 223334555555 78888777777777666 77789999999999987777787777777766665544322
Q ss_pred ccccchhHHHHHHHHHHHHHHHHHHHHHhhhccccCcchhhhhhHHHHHHHHHHHHHHHHHHhh--ccCchhHHHHHHHH
Q 041759 413 ISNAGKRMRIGLELASLFSAYIAYTVIFIYAIELFPTCVRNSATSIMRLAIIFAAIFSSVLVAA--GSNNEFVSYGVFGL 490 (525)
Q Consensus 413 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~r~~~~~~~~~~~~~g~~~~p~i~~~--~~~~~~~~~~~~~~ 490 (525)
+....+..++.+++.+...+...++..|..|++.|+++.|+.+....+|..++|.+.|. ...+....+.+.++
T Consensus 312 -----~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~~~g~~~g~~~~~~~~g~~~g~~l~G~l~~~~g~~~~~~~~~~ 386 (417)
T PRK10489 312 -----WILAVLCLALFGYLSAISSLLQYTLLQTQTPDEMLGRINGLWTAQNVTGDAIGAALLGGLGAMMTPVASASASGF 386 (417)
T ss_pred -----HHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHhhhHhHHHHHHHHHHHHhchhhHHHHHHH
Confidence 33445566666677666667778899999999999999999999999999999999985 22345556665555
Q ss_pred HHHH-HHHHHHhccCCCCCCccchHHH
Q 041759 491 VIIC-CGFFVICLPETRGSSLCDTIDQ 516 (525)
Q Consensus 491 ~~~~-~~~~~~~~~~~~~~~~~~~~~~ 516 (525)
+.++ +.+....+++.|+++.+|.+++
T Consensus 387 ~~~~~~~~~~~~~~~~~~~~~~~~~~~ 413 (417)
T PRK10489 387 GLLIIGVLLLLVLGELRRFRQTPPEVD 413 (417)
T ss_pred HHHHHHHHHHHhcccccccccccccCC
Confidence 4444 4455566788887777666544
No 40
>PRK10091 MFS transport protein AraJ; Provisional
Probab=100.00 E-value=1.3e-30 Score=256.09 Aligned_cols=340 Identities=11% Similarity=0.050 Sum_probs=247.0
Q ss_pred ccceeeccccccchhhhhhhHHHHHHHHHHHhHHhhHhcccccCCchHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHH
Q 041759 100 ALTIISEWGLECSSAFIKGLPAASHFTGCLLGIVFLATLADSSLGRKNLLFLSCLTMSVATSLTIFSNNLWIYSLLRFFS 179 (525)
Q Consensus 100 ~~~i~~~~~~~~~s~~~~g~~~s~~~lg~~~~~~~~G~l~dr~~Grk~~~~~~~~~~~i~~~~~~~~~~~~~l~~~r~l~ 179 (525)
+|.+++|+|+ +..+.|++.+.+.+++.+++++.|+++|| +|||+++.++.++.+++.+++++++|++.+++.|++.
T Consensus 26 l~~~~~~~g~---s~~~~g~~~s~~~~~~~~~~~~~g~l~dr-~g~r~~~~~~~~~~~~~~~l~~~~~~~~~l~~~r~l~ 101 (382)
T PRK10091 26 LTELAHDVGI---SIPAAGHMISYYALGVVVGAPIIALFSSR-YSLKHILLFLVALCVIGNAMFTLSSSYLMLAIGRLVS 101 (382)
T ss_pred hHHHHHHcCC---CHHHHhHHHHHHHHHHHHHHHHHHHHHcc-CccHHHHHHHHHHHHHHHHHHHHhCcHHHHHHHHHHH
Confidence 8999999999 99999999999999999999999999999 9999999999999999999999999999999999999
Q ss_pred hhcccchhhhhheeeEeeecCcchhhHHhHHHHHHHHHHHHHHHHH-HhccCCchHHHHHHHHHHHHHHHhHhheeecCC
Q 041759 180 GISRATIGTCTIVLLTEKVGTEWRGLVGILDSFFFTIGTLTLPAIA-YTNRSSSWTIIYLWTSIPTLVYSGLLYIFVSES 258 (525)
Q Consensus 180 G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~l~~~l~-~~~~~~~wr~~f~~~~~~~~~~~~~~~~~lpes 258 (525)
|++.+...+....++.|++++++|++++++...+..+|..+++.++ .+....+||+.|++.+++.++..+..+.++||.
T Consensus 102 G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~l~~~l~~~~gwr~~f~~~~~~~~~~~~~~~~~lp~~ 181 (382)
T PRK10091 102 GFPHGAFFGVGAIVLSKIIKPGKVTAAVAGMVSGMTVANLLGIPLGTYLSQEFSWRYTFLLIAVFNIAVLASIYFWVPDI 181 (382)
T ss_pred HhhhHHHHHHHHHHHHHhCChHHhhHHHHHHHHHHHHHHHHhccHHHHHhhhccHHHHHHHHHHHHHHHHHHHHHhCCCC
Confidence 9999988888888899999999999999999999999999999884 455667999999999988777664555667774
Q ss_pred chHhhhcCCHHHHHHHHHhhCCCcCCccchhhhhhhccCCCCcccccccccchhhhhhhhcchhHHHHHHHHHHHHHHH-
Q 041759 259 PRWLFMQGRQEEAVEVIKSLSPIKDSNQLSLSLVSAVSFGHEPAASSKESSFLSSIRELFVRRWALERTLALMVPGFGI- 337 (525)
Q Consensus 259 p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~- 337 (525)
++ +.+. +. ....+.++++..+......++...+.
T Consensus 182 ~~----~~~~-~~----------------------------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~ 216 (382)
T PRK10091 182 RD----EAKG-GL----------------------------------------REQFHFLRSPAPWLIFAATMFGNAGVF 216 (382)
T ss_pred Cc----cccc-CH----------------------------------------HHHHHHhcChHHHHHHHHHHHHHHHHH
Confidence 31 0000 00 01112345555444333332222222
Q ss_pred HHHHhhhhhcccccCChhHHHHHHHHHhcccccccCchhHHHHHHHHHhhcChhHHHHHHHHHHHHHHHHHHhccccccc
Q 041759 338 GVVYYGMTLGIENLGFDIYLGVVFNALLEIPNLASTIPSFFLTFFLIQKWNRKSSLLVLFIISGICSIMAVVANDISNAG 417 (525)
Q Consensus 338 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~d~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 417 (525)
....+..+++.+..|.+....+.......+ +.+++.++.+++.||+++|+.+..+..+..++.+++...... .
T Consensus 217 ~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~----~~~ig~~~~g~l~~r~~~~~~~~~~~~~~~i~~~~~~~~~~~---~ 289 (382)
T PRK10091 217 AWFSYIKPYMMFISGFSETSMTFIMMLVGL----GMVLGNLLSGRLSGRYSPLRIAAVTDFIIVLALLMLFFFGGM---K 289 (382)
T ss_pred HHHHHHHHHHHHhcCCCHHHHHHHHHHHHH----HHHHHhHHHheeccccCchhHHHHHHHHHHHHHHHHHHHHhh---H
Confidence 222334455555578888888887777777 777999999999999999999988888777776655443332 1
Q ss_pred hhHHHHHHHHHHHHHHHHHHH-HHhhhccccCcchhhhhhHHHHHHHHHHHHHHHHHHhh--c-cCchhHHHHHHHHHHH
Q 041759 418 KRMRIGLELASLFSAYIAYTV-IFIYAIELFPTCVRNSATSIMRLAIIFAAIFSSVLVAA--G-SNNEFVSYGVFGLVII 493 (525)
Q Consensus 418 ~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~p~~~r~~~~~~~~~~~~~g~~~~p~i~~~--~-~~~~~~~~~~~~~~~~ 493 (525)
+ ...+..++.+.+.....+. ......+..|.+.++.+ ..+....+|..++|.+.|. + ..++...+.+.+++.+
T Consensus 290 ~-~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~g~~~Gp~~~G~l~~~~~~~~~~~~~~~~~~~ 366 (382)
T PRK10091 290 T-ASLIFAFICCAGLFALSAPLQILLLQNAKGGELLGAA--GGQIAFNLGSAIGAYCGGMMLTLGLAYNYVALPAALLSF 366 (382)
T ss_pred H-HHHHHHHHHHHHHHhhhHHHHHHHHHhCCcchHHHHH--HHHHHHHHHHHHHHHHhHHHHHcccCcchHHHHHHHHHH
Confidence 2 3333333444444333332 22344444455555544 3466778999999999985 2 2356666666666555
Q ss_pred HHHHH
Q 041759 494 CCGFF 498 (525)
Q Consensus 494 ~~~~~ 498 (525)
+....
T Consensus 367 ~~~~~ 371 (382)
T PRK10091 367 AAMSS 371 (382)
T ss_pred HHHHH
Confidence 54443
No 41
>TIGR00711 efflux_EmrB drug resistance transporter, EmrB/QacA subfamily. This subfamily of drug efflux proteins, a part of the major faciliator family, is predicted to have 14 potential membrane-spanning regions. Members with known activities include EmrB (multiple drug resistance efflux pump) in E. coli, FarB (antibacterial fatty acid resistance) in Neisseria gonorrhoeae, TcmA (tetracenomycin C resistance) in Streptomyces glaucescens, etc. In most cases, the efflux pump is described as having a second component encoded in the same operon, such as EmrA of E. coli.
Probab=100.00 E-value=4.4e-31 Score=268.78 Aligned_cols=380 Identities=13% Similarity=0.097 Sum_probs=285.7
Q ss_pred HHHHHHHHHHHHHHHHHHhhhcccCccccccCCCCCCCCCCCCCCCCCCceecCCCCccccceeeccccccchhhhhhhH
Q 041759 41 QAILVSLASLFDSQQSFISVYTEAEPTWHCLNNTTCSSASNICMFPKSSWAWDGNPTTTALTIISEWGLECSSAFIKGLP 120 (525)
Q Consensus 41 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~c~~~~~~~~~~~~p~~~~~~i~~~~~~~~~s~~~~g~~ 120 (525)
.+..++++.++..+|....+.. .|.+.+++|. +..+.+++
T Consensus 3 ~~~~~~~~~~~~~~~~~~~~~~-------------------------------------~p~~~~~~g~---s~~~~~~~ 42 (485)
T TIGR00711 3 LTIVLMLGTFMAVLDSTIVNVA-------------------------------------IPTIAGDLGS---SLSQVQWV 42 (485)
T ss_pred HHHHHHHHHHHHHHHHHHHHHH-------------------------------------HHHHHHhcCC---ChhhhhHH
Confidence 3567778899999999999988 9999999999 99999999
Q ss_pred HHHHHHHHHHhHHhhHhcccccCCchHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHhhcccchhhhhheeeEeeecC
Q 041759 121 AASHFTGCLLGIVFLATLADSSLGRKNLLFLSCLTMSVATSLTIFSNNLWIYSLLRFFSGISRATIGTCTIVLLTEKVGT 200 (525)
Q Consensus 121 ~s~~~lg~~~~~~~~G~l~dr~~Grk~~~~~~~~~~~i~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~ 200 (525)
.+.+.++..++.++.|+++|| +|||++++++.++++++.+++++++|++.++++|+++|++.+...+...+++.|++|+
T Consensus 43 ~~~~~~~~~~~~~~~g~l~dr-~g~r~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~G~~~~~~~~~~~~~i~~~~~~ 121 (485)
T TIGR00711 43 ITSYMLANAISIPLTGWLAKR-FGTRRLFLISTFAFTLGSLLCGVAPNLELMIIFRVIQGFGGGPLIPLSFSTLLNIYPP 121 (485)
T ss_pred HHHHHHHHHHHHHhHHHHHHH-hCcHHHHHHHHHHHHHHHHHHhCcCCHHHHHHHHHHHHhhhhhHHHHHHHHHHHHCCH
Confidence 999999999999999999999 9999999999999999999999999999999999999999999999999999999999
Q ss_pred cchhhHHhHHHHHHHHHHHHHHHH-HHhccCCchHHHHHHHHHHHHHHHhHhheeecCCchHhhhcCCHHHHHHHH----
Q 041759 201 EWRGLVGILDSFFFTIGTLTLPAI-AYTNRSSSWTIIYLWTSIPTLVYSGLLYIFVSESPRWLFMQGRQEEAVEVI---- 275 (525)
Q Consensus 201 ~~r~~~~~~~~~~~~~G~~l~~~l-~~~~~~~~wr~~f~~~~~~~~~~~~~~~~~lpesp~~~~~~~~~~~~~~~~---- 275 (525)
++|+++.+++..+..+|..++|.+ +.+.+..+||+.|++.+++.++..++..+++||+++. .+++.+......
T Consensus 122 ~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~~w~~~f~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~d~~g~~l~~~~ 199 (485)
T TIGR00711 122 EKRGRAMAIWGLTVLVAPALGPTLGGWIIENYHWRWIFLINVPIGIIVVVVAFFILPRDKPA--ASENFDFLGLLLLSVG 199 (485)
T ss_pred HHHHHHHHHHHHHHHHHhhhhhccHhHhccCcCceehhhhhhHHHHHHHHHHHHHcCCcccc--ccCCCcHHHHHHHHHH
Confidence 999999999999999999999998 5566778999999998888877765666667765421 111111111000
Q ss_pred -----HhhCCCc-CCccchhhhhh------------hccCCCCcccccccccchhhhhhhhcchhHHHHHHHHHHHHHHH
Q 041759 276 -----KSLSPIK-DSNQLSLSLVS------------AVSFGHEPAASSKESSFLSSIRELFVRRWALERTLALMVPGFGI 337 (525)
Q Consensus 276 -----~~~~~~~-~~~~~~~~~~~------------~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~ 337 (525)
....++. ++...+..... ...+..++ ++ ....++++++.++...+..++..+..
T Consensus 200 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~ 271 (485)
T TIGR00711 200 LGSLLYGLSEGPERGWFDSNEILILSITGLVAIIAFVVWELTDD---NP-----LVDLRLFKYRNFTIGCVYMSLLGLGL 271 (485)
T ss_pred HHHHHHHHhhCCCCCCCCchHHHHHHHHHHHHHHHHHHHHHcCC---CC-----ccCHHHHcCCChHHHHHHHHHHHHHH
Confidence 0000000 00000000000 00000000 00 11235778887776666666555555
Q ss_pred HHHHhhhhhcccc-cCChhHHHHHHHHHhcccccccCchhHHHHHHHHHhhcChhHHHHHHHHHHHHHHHHHHhcccccc
Q 041759 338 GVVYYGMTLGIEN-LGFDIYLGVVFNALLEIPNLASTIPSFFLTFFLIQKWNRKSSLLVLFIISGICSIMAVVANDISNA 416 (525)
Q Consensus 338 ~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~d~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 416 (525)
....+..|.++++ .|.+..+.+.......+ +.+++.++.+++.||++||+.+.++..+.+++..++.+.... ..
T Consensus 272 ~~~~~~~p~~~~~~~g~s~~~~g~~~~~~~~----~~~~~~~~~g~l~~r~~~~~~~~~g~~~~~~~~~~~~~~~~~-~~ 346 (485)
T TIGR00711 272 YGSFYLLPLYLQQVLGYTALQAGLHILPVGL----APMLSSPIAGRMGDKIDPRKLVTIGLILYAVGFYWRAFTFTP-DT 346 (485)
T ss_pred HHHHHHHHHHHHHhcCCCHHHHHHHHHHHHH----HHHHHHHHHHHHHhhcCcHHHHHHHHHHHHHHHHHHhccCCC-CC
Confidence 5555556666654 78888888877776666 777999999999999999999998888888777766532211 12
Q ss_pred chhHHHHHHHHHHHHHHHHHHHHHhhhccccCcchhhhhhHHHHHHHHHHHHHHHHHHhh
Q 041759 417 GKRMRIGLELASLFSAYIAYTVIFIYAIELFPTCVRNSATSIMRLAIIFAAIFSSVLVAA 476 (525)
Q Consensus 417 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~r~~~~~~~~~~~~~g~~~~p~i~~~ 476 (525)
+........++.+++.+..++.......+..|++.++++.++.+....+|+.+++.+.+.
T Consensus 347 ~~~~~~~~~~l~g~g~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~g~~ig~~i~g~ 406 (485)
T TIGR00711 347 PFLAIALPQFIRGFGMGCFFMPLTTIALSGLPPHKIARGSSLSNFTRQLGGSIGTALITT 406 (485)
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCHHHHhHHHHHHHHHHHHHHHHHHHHHHH
Confidence 233455566777788887777777777788999999999999999999999999998874
No 42
>PF07690 MFS_1: Major Facilitator Superfamily; InterPro: IPR011701 Among the different families of transporter, only two occur ubiquitously in all classifications of organisms. These are the ATP-Binding Cassette (ABC) superfamily and the Major Facilitator Superfamily (MFS). The MFS transporters are single-polypeptide secondary carriers capable only of transporting small solutes in response to chemiosmotic ion gradients [, ].; GO: 0055085 transmembrane transport, 0016021 integral to membrane; PDB: 2GFP_B 3O7P_A 3O7Q_A 1PW4_A.
Probab=100.00 E-value=1.2e-31 Score=261.30 Aligned_cols=329 Identities=21% Similarity=0.259 Sum_probs=250.3
Q ss_pred cc-ceeeccccccchhhhhhhHHHHHHHHHHHhHHhhHhcccccCCchHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHH
Q 041759 100 AL-TIISEWGLECSSAFIKGLPAASHFTGCLLGIVFLATLADSSLGRKNLLFLSCLTMSVATSLTIFSNNLWIYSLLRFF 178 (525)
Q Consensus 100 ~~-~i~~~~~~~~~s~~~~g~~~s~~~lg~~~~~~~~G~l~dr~~Grk~~~~~~~~~~~i~~~~~~~~~~~~~l~~~r~l 178 (525)
.| .+.+++|. +..+.+++.+++.++..+++++.|+++|| +|||+++.++.++.+++.++..+++|++.+++.|++
T Consensus 19 ~~~~~~~~~~~---s~~~~~~~~~~~~~~~~~~~~~~g~l~dr-~g~r~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 94 (352)
T PF07690_consen 19 LPLYLAEELGL---SPSQIGLLFSAFFLGSALFSPFAGYLSDR-FGRRRVLIIGLLLFALGSLLLAFASNFWLLLIARFL 94 (352)
T ss_dssp HH-HHHCCSTT---TSHCHHHHHHHHHHHHHHHHHHHHHHHHH-S-HHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHH
T ss_pred HHHHHHHccCC---CHHHHHHHHHHHHHHHHHHHHHHHHHHHH-cCCeeeEeehhhhhhhHHHHhhhhhhHHHHhhhccc
Confidence 77 89999999 99999999999999999999999999999 999999999999999997777777888899999999
Q ss_pred HhhcccchhhhhheeeEeeecCcchhhHHhHHHHHHHHHHHHHHHHHHh-ccCCchHHHHHHHHHHHHHHHhHhheeecC
Q 041759 179 SGISRATIGTCTIVLLTEKVGTEWRGLVGILDSFFFTIGTLTLPAIAYT-NRSSSWTIIYLWTSIPTLVYSGLLYIFVSE 257 (525)
Q Consensus 179 ~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~l~~~l~~~-~~~~~wr~~f~~~~~~~~~~~~~~~~~lpe 257 (525)
.|++.+...+...+++.|++|+++|++++++.+.+..+|.+++|.++.. ....+||+.|++.+++.++..++...++++
T Consensus 95 ~g~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~g~~~g~~l~~~l~~~~~~~~~~~~~~~~~~~~~il~~~~~~~ 174 (352)
T PF07690_consen 95 LGIGSGFFSPASNALIADWFPPEERGRAFGILSAGFSLGSILGPLLGGFLISYFGWRWAFLISAILSLIAAILFILFLPE 174 (352)
T ss_dssp HHHHHHHHHHHHHHHHHHCCCTCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHCHHCCHHHHHHHHHHHHHHHHHCCC--
T ss_pred cccccccccccccccccccchhhhhhhccccccchhhhhhhcccchhhhhhhccccccccccccchhhhhhhhHhhhhhh
Confidence 9999999999999999999999999999999999999999999999554 457799999999999999887544455555
Q ss_pred CchHhhhcCCHHHHHHHHHhhCCCcCCccchhhhhhhccCCCCcccccccccchhh-hhhhhcchhHHHHHHHHHHHHHH
Q 041759 258 SPRWLFMQGRQEEAVEVIKSLSPIKDSNQLSLSLVSAVSFGHEPAASSKESSFLSS-IRELFVRRWALERTLALMVPGFG 336 (525)
Q Consensus 258 sp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~l~~~~~~~~~~~~~~~~~~~ 336 (525)
+|+....+++.++ + +..+++ ..+ ++.++++|.++......+...+.
T Consensus 175 ~~~~~~~~~~~~~---------------~-------------~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~ 221 (352)
T PF07690_consen 175 PPPPRERESPKES---------------E-------------SKKPKP-----LKPGFKSLFKNPVLWILLIAFFLFFFV 221 (352)
T ss_dssp -STTTT--SSTTT---------------T---------------HHHC-----CCH-CTHHHHHHCCHHHHHHHHHHHHH
T ss_pred ccccccccccccc---------------c-------------cccccc-----cccccccccccchhhhhhhhhhHHHHH
Confidence 4321000000000 0 000000 012 55666666544233333333334
Q ss_pred HHHHHhhhhhc-ccccCCh-hHHHHHHHHHhcccccccCchhHHHHHHHHHhhcChhHHHHHHHHHHHHHHHHHHhcccc
Q 041759 337 IGVVYYGMTLG-IENLGFD-IYLGVVFNALLEIPNLASTIPSFFLTFFLIQKWNRKSSLLVLFIISGICSIMAVVANDIS 414 (525)
Q Consensus 337 ~~~~~~~~~~~-~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~d~~g~~~~~~~~~~~~~~~~~~~~~~~~~~ 414 (525)
........|.+ .+.++.+ ....+...+...+ +.+++.++.+++.||+++|+...+......+..+.+......
T Consensus 222 ~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~- 296 (352)
T PF07690_consen 222 FSGFSFFLPLYLQEVLGFSGPSQAGLLFSIFGI----VGIIGSLLAGRLSDRFGRRRRLLIAILLLILGALGLLLLPFS- 296 (352)
T ss_dssp HHHHHHHHHHHCCHHHHCCTHHHHHHHHHHHHH----HHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHCCSHHH-
T ss_pred HHHhhcccchhhhhccCCCHHHHHHHHHHHHHH----HHHHHHHHHHHHHHHcCcHHHHHHHHHHHHHHHHHHHHHHHh-
Confidence 44455555665 6667888 6777777777666 666789999999999999887777777766666655544332
Q ss_pred ccchhHHHHHHHHHHHHHHHHHHHHHhhhccccCcchhhhhhHHHHHHHHHHHHHHH
Q 041759 415 NAGKRMRIGLELASLFSAYIAYTVIFIYAIELFPTCVRNSATSIMRLAIIFAAIFSS 471 (525)
Q Consensus 415 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~r~~~~~~~~~~~~~g~~~~p 471 (525)
.+....+...++.+++.+...+....+..|..|++.++++.|+.+....+|..++|
T Consensus 297 -~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~~~~igP 352 (352)
T PF07690_consen 297 -SSPVWLIIALFLIGFGFGIVFPILFSLIQELVPPEYRGTAFGLFNSIGSLGGIIGP 352 (352)
T ss_dssp -CHHHHHHHHHHHHHHHHHHHCHHHHHHHHCCCHTCHHHHHHHHHHHHHHHHHHHHH
T ss_pred -hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHCC
Confidence 12334555677778888888999999999999999999999999999999999988
No 43
>TIGR00881 2A0104 phosphoglycerate transporter family protein.
Probab=100.00 E-value=2.3e-31 Score=262.04 Aligned_cols=345 Identities=16% Similarity=0.137 Sum_probs=247.1
Q ss_pred ccceeeccccccchhhhhhhHHHHHHHHHHHhHHhhHhcccccCCchHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHH
Q 041759 100 ALTIISEWGLECSSAFIKGLPAASHFTGCLLGIVFLATLADSSLGRKNLLFLSCLTMSVATSLTIFSNNLWIYSLLRFFS 179 (525)
Q Consensus 100 ~~~i~~~~~~~~~s~~~~g~~~s~~~lg~~~~~~~~G~l~dr~~Grk~~~~~~~~~~~i~~~~~~~~~~~~~l~~~r~l~ 179 (525)
.|.+++++|+ +..+.|++.+++.++..+++++.|+++|| +|||+++.++.++.+++.++.+++++++.+++.|++.
T Consensus 18 ~~~~~~~~g~---s~~~~g~~~~~~~~~~~~~~~~~g~l~dr-~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 93 (379)
T TIGR00881 18 MPYLVEEIGL---SKTDLGLLLSSFSIAYGISKFVMGSVSDR-SNPRVFLPIGLILCAIVNLFFGFSTSLWVMAALWALN 93 (379)
T ss_pred hHHHHHHhCC---CHhHHHHHHHHHHHHHHhhhhhhhHHHHh-hCCeehhHHHHHHHHHHHHHHHHhhhHHHHHHHHHHH
Confidence 8999999999 99999999999999999999999999999 9999999999999999999999999999999999999
Q ss_pred hhcccchhhhhheeeEeeecCcchhhHHhHHHHHHHHHHHHHH-HH-HHhccCCchHHHHHHHHHHHHHHHhHhheeecC
Q 041759 180 GISRATIGTCTIVLLTEKVGTEWRGLVGILDSFFFTIGTLTLP-AI-AYTNRSSSWTIIYLWTSIPTLVYSGLLYIFVSE 257 (525)
Q Consensus 180 G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~l~~-~l-~~~~~~~~wr~~f~~~~~~~~~~~~~~~~~lpe 257 (525)
|++.+...+...+++.|++|+++|+++.++.+.+..+|.++++ ++ +.+....+||+.|++.+++.++..++.+++.||
T Consensus 94 g~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 173 (379)
T TIGR00881 94 GIFQGMGWPPCGRTVTKWFSRSERGTWVSFWNCSHNVGGGLLPPLVLFGIAELYSWHWVFIVPGIIAIIVSLICFLLLRD 173 (379)
T ss_pred HhhccccCCchHHHHHHhcCHhhheeeEeehhccchhHHHHHHHHHHHHHHhcCCchhHHHHHHHHHHHHHHHHheeeCC
Confidence 9999999999999999999999999999999999999999999 45 444556799999999988887776577777888
Q ss_pred CchHhhhcCCHHHHHHHHHhhCCCcCCccchhhhhhhccCCCCcccccccccchhhhhhhhcchhHHHHHHHHHHHHHHH
Q 041759 258 SPRWLFMQGRQEEAVEVIKSLSPIKDSNQLSLSLVSAVSFGHEPAASSKESSFLSSIRELFVRRWALERTLALMVPGFGI 337 (525)
Q Consensus 258 sp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~ 337 (525)
+|+.. +..++ + +...+.. +..++.++ ++........++++++|.++...+..++.....
T Consensus 174 ~~~~~---~~~~~---------~-~~~~~~~----~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 232 (379)
T TIGR00881 174 SPQSC---GLPPA---------E-EMPNEEP----DGDAEKKE----EELTKKQIFLQYVLLNKVLWYISLGYVFVYVVR 232 (379)
T ss_pred Ccccc---ccCcc---------c-cCccccc----cccccccc----ccccchHHHHHHHHhcchHHHHHHHHHHHHHHH
Confidence 66321 00000 0 0000000 00000000 000011134567788887666655555555444
Q ss_pred HHHHhhhhhcc-cccCChhHHHHHHHHHhcccccccCchhHHHHHHHHHhhcC-hhHHH-HHHHH-HHHHHHHHHHhccc
Q 041759 338 GVVYYGMTLGI-ENLGFDIYLGVVFNALLEIPNLASTIPSFFLTFFLIQKWNR-KSSLL-VLFII-SGICSIMAVVANDI 413 (525)
Q Consensus 338 ~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~d~~g~-~~~~~-~~~~~-~~~~~~~~~~~~~~ 413 (525)
.......+.+. +..|.+....+.......+ +.+++.++.+++.||..+ |+... ..... ..++..........
T Consensus 233 ~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~----~~~~~~~~~g~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 308 (379)
T TIGR00881 233 TGILDWSPLYLTQEKGFSKEKASWAFTLYEL----GGLVGTLLAGWLSDKLFNGRRGPLAVFFMALIIVSLLVYWLNPAA 308 (379)
T ss_pred HHHHHHHHHHHHHHhCCCHHHHHHHHHHHHH----HcchhHHHHHHHHHHHcCCcchHHHHHHHHHHHHHHHHHhcCcch
Confidence 43333444444 4578888887777777776 777999999999998643 33222 22111 11222221111111
Q ss_pred cccchhHHHHHHHHHHHHHHHHHHHHHhhhccccCcchhhhhhHHHHHHHHHHHHHHHHHHhh
Q 041759 414 SNAGKRMRIGLELASLFSAYIAYTVIFIYAIELFPTCVRNSATSIMRLAIIFAAIFSSVLVAA 476 (525)
Q Consensus 414 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~r~~~~~~~~~~~~~g~~~~p~i~~~ 476 (525)
+.....+..++.++......+....+..|..|++.|+++.|+.+....+|+.++|.+.|.
T Consensus 309 ---~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~~~~~~g~ 368 (379)
T TIGR00881 309 ---NPLMDLICLFALGFLVYGPQMLIGVIASELAPKKAAGTAAGFVGFFAYLGGILAGLPLGY 368 (379)
T ss_pred ---hHHHHHHHHHHHHHHHhhhhHHHHHHHHHhcCcchhHHHHHHHHHhhhhhhhhhhhhHHH
Confidence 122333444445554445555667788999999999999999999999999999999885
No 44
>PRK03893 putative sialic acid transporter; Provisional
Probab=100.00 E-value=1.4e-30 Score=265.70 Aligned_cols=396 Identities=13% Similarity=0.079 Sum_probs=263.1
Q ss_pred HHHHHHHHHHHHHHHHHHhhhcccCccccccCCCCCCCCCCCCCCCCCCceecCCCCccccceeeccccccchhhhhhhH
Q 041759 41 QAILVSLASLFDSQQSFISVYTEAEPTWHCLNNTTCSSASNICMFPKSSWAWDGNPTTTALTIISEWGLECSSAFIKGLP 120 (525)
Q Consensus 41 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~c~~~~~~~~~~~~p~~~~~~i~~~~~~~~~s~~~~g~~ 120 (525)
.+..++++.+++.++....... .|.+.+++|+ +..+.+++
T Consensus 21 ~~~~~~~~~~~~~~~~~~~~~~-------------------------------------~~~i~~~~~~---s~~~~~~~ 60 (496)
T PRK03893 21 AFSAAWLGYLLDGFDFVLITLV-------------------------------------LTEVQGEFGL---TTVQAASL 60 (496)
T ss_pred HHHHHHHHHHHHHHHHHHHHHH-------------------------------------HHHHHHHhCC---CHHHHHHH
Confidence 6778888899999999999888 8999999999 99999999
Q ss_pred HHHHHHHHHHhHHhhHhcccccCCchHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHhhcccchhhhhheeeEeeecC
Q 041759 121 AASHFTGCLLGIVFLATLADSSLGRKNLLFLSCLTMSVATSLTIFSNNLWIYSLLRFFSGISRATIGTCTIVLLTEKVGT 200 (525)
Q Consensus 121 ~s~~~lg~~~~~~~~G~l~dr~~Grk~~~~~~~~~~~i~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~ 200 (525)
.+.+.+++.+++++.|+++|| +|||++++.+.++.+++.++.++++|++.+++.|++.|++.+...+....++.|++|+
T Consensus 61 ~~~~~~~~~~~~~~~g~l~dr-~g~r~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~G~~~~~~~~~~~~~~~~~~~~ 139 (496)
T PRK03893 61 ISAAFISRWFGGLLLGAMGDR-YGRRLAMVISIVLFSVGTLACGFAPGYWTLFIARLVIGMGMAGEYGSSATYVIESWPK 139 (496)
T ss_pred HHHHHHHHHHHHHHHHHHHHH-hCcHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCH
Confidence 999999999999999999999 9999999999999999999999999999999999999999999999999999999999
Q ss_pred cchhhHHhHHHHHHHHHHHHHHHH-HHhccCCchHHHHHHHHHHHHHHHhHhheeecCCchHhhhcCCHHHHHHHHHhhC
Q 041759 201 EWRGLVGILDSFFFTIGTLTLPAI-AYTNRSSSWTIIYLWTSIPTLVYSGLLYIFVSESPRWLFMQGRQEEAVEVIKSLS 279 (525)
Q Consensus 201 ~~r~~~~~~~~~~~~~G~~l~~~l-~~~~~~~~wr~~f~~~~~~~~~~~~~~~~~lpesp~~~~~~~~~~~~~~~~~~~~ 279 (525)
++|+++.++...+..+|.++++.+ +.+....+||+.|++..+..++.. +....+||++++...+++.++.++..+...
T Consensus 140 ~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~w~~~f~~~~~~~~~~~-~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~ 218 (496)
T PRK03893 140 HLRNKASGFLISGFSIGAVVAAQVYSLVVPVWGWRALFFIGILPIIFAL-WLRKNLPEAEDWKEKHAGKAPVRTMVDILY 218 (496)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCHHHHHHHHHHHHHHHH-HHHHhCCCchhhhhhccccccchhHHHHHh
Confidence 999999999999999999999988 556677899999988655544433 445566776543221111100000000000
Q ss_pred CCcCCccchhhhhhhccCCCCcccccccccchhhh----------------hhhhcchhHHHHHHHHHHHHHHHH----H
Q 041759 280 PIKDSNQLSLSLVSAVSFGHEPAASSKESSFLSSI----------------RELFVRRWALERTLALMVPGFGIG----V 339 (525)
Q Consensus 280 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----------------~~l~~~~~~~~~~~~~~~~~~~~~----~ 339 (525)
+ .+.+ .............-...-.... ...+ ....+.++ +..........+... .
T Consensus 219 ~-~~~~-~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~ 293 (496)
T PRK03893 219 R-GEHR-IINILLTLAAAAALWFCFAGNL--QNAAIVAVLGLLCAAIFISFMVQSSGKR-WPTGVMLMVVVLFAFLYSWP 293 (496)
T ss_pred c-chhH-HHHHHHHHHHHHHHHHHHHhhh--cchhHHHHHHHHHHHHHHHHHHHhcccc-hhHHHHHHHHHHHHHhccch
Confidence 0 0000 0000000000000000000000 0000 00000000 000000000000000 1
Q ss_pred HHhhhhhcc-cccCChhHHHHHHHHHhcccccccCchhHHHHHHHHHhhcChhHHHHHHHHHHHHHHHHHHhccccccch
Q 041759 340 VYYGMTLGI-ENLGFDIYLGVVFNALLEIPNLASTIPSFFLTFFLIQKWNRKSSLLVLFIISGICSIMAVVANDISNAGK 418 (525)
Q Consensus 340 ~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~d~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 418 (525)
....+|.++ ++.|.+....+.+.+...+ +.+++.++.+++.||++||+.+..+..+..+..+.+...... .+
T Consensus 294 ~~~~lp~~l~~~~g~~~~~~g~~~~~~~~----~~~~g~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~~---~~ 366 (496)
T PRK03893 294 IQALLPTYLKTDLGYDPHTVANVLFFSGF----GAAVGCCVGGFLGDWLGTRKAYVCSLLISQLLIIPVFAIGGA---NV 366 (496)
T ss_pred HHHHHHHHHHhhcCCCHHHHHHHHHHHHH----HHHHHHHHHHHHHHHhcchHHHHHHHHHHHHHHHHHhhcccc---HH
Confidence 123346666 4788888888888877777 788999999999999999998888776666555443333222 12
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHhhhccccCcchhhhhhHHHHHHHHHHHHHHHHHHhh--ccCchhHHHHHHHH
Q 041759 419 RMRIGLELASLFSAYIAYTVIFIYAIELFPTCVRNSATSIMRLAIIFAAIFSSVLVAA--GSNNEFVSYGVFGL 490 (525)
Q Consensus 419 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~r~~~~~~~~~~~~~g~~~~p~i~~~--~~~~~~~~~~~~~~ 490 (525)
.......++.++......+....+..|.+|++.|++++|+.+....+|+.++|++.|. +..++...+...++
T Consensus 367 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~g~~lgp~l~g~l~~~~g~~~~~~~~~~ 440 (496)
T PRK03893 367 WVLGLLLFFQQMLGQGISGLLPKLIGGYFDTEQRAAGLGFTYNVGALGGALAPILGALIAQRLDLGTALASLSF 440 (496)
T ss_pred HHHHHHHHHHHHHhcccchhhHHHHHhhCCHHHhhcccchhhhhhhHHHHHHHHHHHHHhccCChHHHHHHHHH
Confidence 2222222222222233345666788899999999999999999999999999999985 33344445544443
No 45
>PRK03699 putative transporter; Provisional
Probab=100.00 E-value=3.1e-30 Score=254.50 Aligned_cols=368 Identities=15% Similarity=0.116 Sum_probs=269.2
Q ss_pred HHHHHHHHHHHHHHHHHHhhhcccCccccccCCCCCCCCCCCCCCCCCCceecCCCCccccceeeccccccchhhhhhhH
Q 041759 41 QAILVSLASLFDSQQSFISVYTEAEPTWHCLNNTTCSSASNICMFPKSSWAWDGNPTTTALTIISEWGLECSSAFIKGLP 120 (525)
Q Consensus 41 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~c~~~~~~~~~~~~p~~~~~~i~~~~~~~~~s~~~~g~~ 120 (525)
.....+++.+..+.+....+.. +|++++++|+ +..+.+++
T Consensus 8 ~~~~~~~~~~~~~~~~~~~g~~-------------------------------------~~~i~~~~~~---s~~~~g~~ 47 (394)
T PRK03699 8 LTWISFLSYALTGALVIVTGMV-------------------------------------MGPIAEYFNL---PVSSMSNT 47 (394)
T ss_pred HHHHHHHHHHHHHHHHHHHhhh-------------------------------------hHHHHHHhCC---CHHHHHHH
Confidence 5667777888888888888888 9999999999 99999999
Q ss_pred HHHHHHHHHHhHHhhHhcccccCCchHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHhhcccchhhhhheeeEeeecC
Q 041759 121 AASHFTGCLLGIVFLATLADSSLGRKNLLFLSCLTMSVATSLTIFSNNLWIYSLLRFFSGISRATIGTCTIVLLTEKVGT 200 (525)
Q Consensus 121 ~s~~~lg~~~~~~~~G~l~dr~~Grk~~~~~~~~~~~i~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~ 200 (525)
.+.+.+++.+++++.|++.|| +|||+++..+.++.+++.++.+++++++.+++.|+++|++.+...+....++.|++|+
T Consensus 48 ~s~~~~~~~i~~~~~g~l~dr-~g~r~~~~~~~~~~~i~~~l~~~~~~~~~~~~~~~l~G~~~g~~~~~~~~~i~~~~~~ 126 (394)
T PRK03699 48 FTFLNAGILISIFLNAWLMEI-IPLKRQLIFGFALMILAVAGLMFSHSLALFSIAMFVLGVVSGITMSIGTFLITHVYEG 126 (394)
T ss_pred HHHHHHHHHHHHHHHHHHHHH-hhHHHHHHHHHHHHHHHHHHHHHcchHHHHHHHHHHHHHhhHhhccchhHHhhhhccc
Confidence 999999999999999999999 9999999999999999999999999999999999999999998888889999999999
Q ss_pred cchhhHHhHHHHHHHHHHHHHHHH-HHhcc-CCchHHHHHHHHHHHHHHHhHhheeecCCchHhhhcCCHHHHHHHHHhh
Q 041759 201 EWRGLVGILDSFFFTIGTLTLPAI-AYTNR-SSSWTIIYLWTSIPTLVYSGLLYIFVSESPRWLFMQGRQEEAVEVIKSL 278 (525)
Q Consensus 201 ~~r~~~~~~~~~~~~~G~~l~~~l-~~~~~-~~~wr~~f~~~~~~~~~~~~~~~~~lpesp~~~~~~~~~~~~~~~~~~~ 278 (525)
++|++.++..+....+|..++|.+ +.++. ..+||+.|.+.+++.++..++.+ + ++.|+. + +.
T Consensus 127 ~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~gw~~~f~~~~~~~~~~~~~~~-~-~~~p~~---~-~~---------- 190 (394)
T PRK03699 127 KQRGSRLLFTDSFFSMAGMIFPIIAAYLLARSIEWYWVYACIGLVYVAIFILTL-F-SEFPAL---G-KH---------- 190 (394)
T ss_pred chHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccHHHHHHHHHHHHHHHHHHHH-h-cCCccc---c-cc----------
Confidence 999999999989999999888877 45443 57999999998887776652322 2 222210 0 00
Q ss_pred CCCcCCccchhhhhhhccCCCCcccccccccchhhhhhhhcchhHHHHHHHHHHHHHHHHHHHhhhhhcc-cccCChhHH
Q 041759 279 SPIKDSNQLSLSLVSAVSFGHEPAASSKESSFLSSIRELFVRRWALERTLALMVPGFGIGVVYYGMTLGI-ENLGFDIYL 357 (525)
Q Consensus 279 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~ 357 (525)
+ . + ++ ++ ..++.+ ++.++...+..++............|.++ +++|.+..+
T Consensus 191 -~-~-~-----------~~-~~------------~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~g~s~~~ 242 (394)
T PRK03699 191 -A-P-K-----------AD-KP------------VAKEKW-GIGVLFLAIAALLYILAQLTFISWVPEYAQKKFGMSLED 242 (394)
T ss_pred -C-c-c-----------cc-Cc------------cccccC-ChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCChHH
Confidence 0 0 0 00 00 000011 23323222222222223333334455555 557888888
Q ss_pred HHHHHHHhcccccccCchhHHHHHHHHHhhcChhHHHHHHHHHHHHHHHHHHhccccccchhHHHHHHHHHHHHHHHHHH
Q 041759 358 GVVFNALLEIPNLASTIPSFFLTFFLIQKWNRKSSLLVLFIISGICSIMAVVANDISNAGKRMRIGLELASLFSAYIAYT 437 (525)
Q Consensus 358 ~~~~~~~~~~~~~~~~~~~~~~~~~l~d~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 437 (525)
.+...+...+ +.+++.++.+++.||+++|+.+.....+..+...++....+. ....+..++.+++.+..++
T Consensus 243 ~~~~~~~~~~----~~~ig~~~~g~l~dr~~~~~~l~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~G~~~~~~~~ 313 (394)
T PRK03699 243 AGNLVSNFWM----AYMVGMWIFSFIVRFFDLQRILTVLAGLALVLMYLFVNTDDP-----SHLLYAILGLGFFSSAIYT 313 (394)
T ss_pred hhHHHHHHHH----HHHHHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHcCCc-----hHHHHHHHHHHHHHHHHHH
Confidence 8887777666 677999999999999999998887777666655554433322 2344456666777777778
Q ss_pred HHHhhhccccCcchhhhhhHHHHHHHHHHHHHHHHHHhh--ccCchhHHHHHHHHHHHHHHHHHHhcc
Q 041759 438 VIFIYAIELFPTCVRNSATSIMRLAIIFAAIFSSVLVAA--GSNNEFVSYGVFGLVIICCGFFVICLP 503 (525)
Q Consensus 438 ~~~~~~~~~~p~~~r~~~~~~~~~~~~~g~~~~p~i~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~ 503 (525)
...++..+..|.+ ++...+.......+|..++|.+.|. +..+....++..+++.+++.+.....+
T Consensus 314 ~~~~~~~~~~~~~-~~~~~g~~~~~~~~g~~i~p~~~G~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~ 380 (394)
T PRK03699 314 TIITLGSQQTKVA-SPKLVNFILTCGTIGTMLTFVVTSPIVAHFGLQAALLTANGLYAVVFVMCILLG 380 (394)
T ss_pred HHHHHHHHHccCC-CHHHHHHHHHhhhHHHHHHHHHHHHHHHHhCchhhhhhhHHHHHHHHHHHHHHH
Confidence 7777777777644 5677888888889999999999985 334566677666666666655444443
No 46
>TIGR00900 2A0121 H+ Antiporter protein.
Probab=99.98 E-value=2.1e-30 Score=253.79 Aligned_cols=329 Identities=12% Similarity=0.004 Sum_probs=257.9
Q ss_pred ccceeeccccccchhhhhhhHHHHHHHHHHHhHHhhHhcccccCCchHHHHHHHHHHHHHHHHHHhhh-----hHHHHHH
Q 041759 100 ALTIISEWGLECSSAFIKGLPAASHFTGCLLGIVFLATLADSSLGRKNLLFLSCLTMSVATSLTIFSN-----NLWIYSL 174 (525)
Q Consensus 100 ~~~i~~~~~~~~~s~~~~g~~~s~~~lg~~~~~~~~G~l~dr~~Grk~~~~~~~~~~~i~~~~~~~~~-----~~~~l~~ 174 (525)
+|.+..+++. +..+.|++.+++.++..+++++.|+++|| +|||++++.+.++.+++.++..+.+ +++.+++
T Consensus 22 ~~~~~~~~~~---s~~~~g~~~~~~~~~~~i~~~~~G~l~dr-~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 97 (365)
T TIGR00900 22 LPLYVLAGTG---SASVLSLAALAGMLPYVVLSPIAGALADR-YDRKKVMIGADLIRAVLVAVLPFVALLGGLNIWQVYV 97 (365)
T ss_pred HHHHHHHhhc---cHHHHHHHHHHHHHHHHHHHHhhhHHHHh-hchhHHHHHHHHHHHHHHHHHHHHHHcCCCcHHHHHH
Confidence 7888888998 99999999999999999999999999999 9999999999999999999888887 9999999
Q ss_pred HHHHHhhcccchhhhhheeeEeeecCcchhhHHhHHHHHHHHHHHHHHHH-HHhccCCchHHHHHHHHHHHHHHHhHhhe
Q 041759 175 LRFFSGISRATIGTCTIVLLTEKVGTEWRGLVGILDSFFFTIGTLTLPAI-AYTNRSSSWTIIYLWTSIPTLVYSGLLYI 253 (525)
Q Consensus 175 ~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~l~~~l-~~~~~~~~wr~~f~~~~~~~~~~~~~~~~ 253 (525)
.|++.|++.+...+...+++.|++|+++|+++.++.+.+..+|.+++|.+ +.+....+||+.|++.++..++..+..+.
T Consensus 98 ~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~l~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~ 177 (365)
T TIGR00900 98 LAGILAIAQAFFTPAYQAMLPDLVPEEQLTQANSLSQAVRSLFYIVGPGIGGLMYATLGIKWAIWVDAVGFAISALLIVS 177 (365)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHh
Confidence 99999999999999999999999999999999999999999999999998 44556679999999888776665523222
Q ss_pred e-ecCCchHhhhcCCHHHHHHHHHhhCCCcCCccchhhhhhhccCCCCcccccccccchhhhhhhhcchhHHHHHHHHHH
Q 041759 254 F-VSESPRWLFMQGRQEEAVEVIKSLSPIKDSNQLSLSLVSAVSFGHEPAASSKESSFLSSIRELFVRRWALERTLALMV 332 (525)
Q Consensus 254 ~-lpesp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~ 332 (525)
. .||.++ +++.+..++..++ ....++.++++|.++...+..++
T Consensus 178 ~~~~~~~~----~~~~~~~~~~~~~--------------------------------~~~~~~~~~~~~~~~~~~~~~~~ 221 (365)
T TIGR00900 178 VRIPELAA----SEIQALSNAVLRD--------------------------------TREGIKFVLKNPLLRTLLLLALL 221 (365)
T ss_pred cccccCCC----ccccccchhHHHH--------------------------------HHhHHHHHHcCcHHHHHHHHHHH
Confidence 2 232211 0000000000000 01356677888887666555555
Q ss_pred HHHHHHHHH-hhhhhcccc-cCChhHHHHHHHHHhcccccccCchhHHHHHHHHHhhcChhHHHHHHHHHHHHHHHHHHh
Q 041759 333 PGFGIGVVY-YGMTLGIEN-LGFDIYLGVVFNALLEIPNLASTIPSFFLTFFLIQKWNRKSSLLVLFIISGICSIMAVVA 410 (525)
Q Consensus 333 ~~~~~~~~~-~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~d~~g~~~~~~~~~~~~~~~~~~~~~~ 410 (525)
......... ...|++.++ ++.+....+.......+ +.+++.++.+++.||.+||+.+..+..+.+++...+...
T Consensus 222 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~ 297 (365)
T TIGR00900 222 FNLVFAPAIVALFPYVQSKYLGRGSTHYGWVLAAFGL----GALLGALLLGLLGRYFKRMALMTGAIFVIGLAILVVGLT 297 (365)
T ss_pred HHHHHHHHHHHHhHHHHHHHhCCchHHHHHHHHHHHH----HHHHHHHHHHHHHHHhchhHHHHHHHHHHHHHHHHHHhh
Confidence 544443333 555666655 78887777777776666 777899999999999999998888877777776666554
Q ss_pred ccccccchhHHHHHHHHHHHHHHHHHHHHHhhhccccCcchhhhhhHHHHHHHHHHHHHHHHHHhh
Q 041759 411 NDISNAGKRMRIGLELASLFSAYIAYTVIFIYAIELFPTCVRNSATSIMRLAIIFAAIFSSVLVAA 476 (525)
Q Consensus 411 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~r~~~~~~~~~~~~~g~~~~p~i~~~ 476 (525)
... .....+..++.+++.+...+...++..|..|++.|+++.|+.+....++..++|.+.|.
T Consensus 298 ~~~----~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~g~~~~g~ 359 (365)
T TIGR00900 298 PPN----FPLFLVLWFAIGVGYGPINVPQGTLLQRRVPAELLGRVFGAQFSLSHAAWPLGLILAGP 359 (365)
T ss_pred chh----HHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 321 33556677778888888888999999999999999999999999999999999999885
No 47
>TIGR00712 glpT glycerol-3-phosphate transporter. This model describes a very hydrophobic protein, predicted to span the membrane at least 8 times. The two members confirmed experimentally as glycerol-3-phosphate transporters, from E. coli and B. subtilis, share more than 50 % amino acid identity. Proteins of the hexose phosphate and phosphoglycerate transport systems are also quite similar.
Probab=99.98 E-value=2.4e-30 Score=258.73 Aligned_cols=397 Identities=12% Similarity=0.024 Sum_probs=261.3
Q ss_pred HHHHHHHHHHHHHHHHHHhhhcccCccccccCCCCCCCCCCCCCCCCCCceecCCCCccccceeeccccccchhhhhhhH
Q 041759 41 QAILVSLASLFDSQQSFISVYTEAEPTWHCLNNTTCSSASNICMFPKSSWAWDGNPTTTALTIISEWGLECSSAFIKGLP 120 (525)
Q Consensus 41 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~c~~~~~~~~~~~~p~~~~~~i~~~~~~~~~s~~~~g~~ 120 (525)
.+....+.+.....+.....+. .|.+++ +|+ +..+.+++
T Consensus 28 ~~~~~~~~~~~~~~~~~~~~~~-------------------------------------~p~~~~-~g~---s~~~~g~~ 66 (438)
T TIGR00712 28 VFLGIFFGYAAYYLVRKNFALA-------------------------------------MPYLVE-QGF---SKGELGFA 66 (438)
T ss_pred HHHHHHHHHHHHHHHhccHHhh-------------------------------------hHHHHH-cCC---CHhHhHHH
Confidence 4555566667777777777777 677775 599 99999999
Q ss_pred HHHHHHHHHHhHHhhHhcccccCCchHHHHHHHHHHHHHHHHHHhh----hhHHHHHHHHHHHhhcccchhhhhheeeEe
Q 041759 121 AASHFTGCLLGIVFLATLADSSLGRKNLLFLSCLTMSVATSLTIFS----NNLWIYSLLRFFSGISRATIGTCTIVLLTE 196 (525)
Q Consensus 121 ~s~~~lg~~~~~~~~G~l~dr~~Grk~~~~~~~~~~~i~~~~~~~~----~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~ 196 (525)
.+++.++..+++++.|+++|| +|||+++..+.++.+++.++.++. ++++.+.+.|++.|++.+...+....++.|
T Consensus 67 ~~~~~~~~~~~~~~~G~l~dr-~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~g~~~g~~~~~~~~~i~~ 145 (438)
T TIGR00712 67 LSAISIAYGFSKFIMGSVSDR-SNPRVFLPAGLILSAAVMLLMGFVPWATSSIAIMFVLLFLNGWFQGMGWPPCGRTMVH 145 (438)
T ss_pred HHHHHHHHHHhhhccchhhhc-cCCceehHHHHHHHHHHHHHHhccccccchHHHHHHHHHHHHHHhhcchHHHHHHHHH
Confidence 999999999999999999999 999999999999999998887764 467888899999999999988888889999
Q ss_pred eecCcchhhHHhHHHHHHHHHHHHHHHH-HHhcc-CCchHHHHHHHHHHHHHHHhHhheeecCCchHhhhcCCHHHHHHH
Q 041759 197 KVGTEWRGLVGILDSFFFTIGTLTLPAI-AYTNR-SSSWTIIYLWTSIPTLVYSGLLYIFVSESPRWLFMQGRQEEAVEV 274 (525)
Q Consensus 197 ~~~~~~r~~~~~~~~~~~~~G~~l~~~l-~~~~~-~~~wr~~f~~~~~~~~~~~~~~~~~lpesp~~~~~~~~~~~~~~~ 274 (525)
++|+++|++++++.+.+..+|..+++.+ +.... ..+||+.|++.+++.++..++.++++||+|+....+ +.++.
T Consensus 146 ~~~~~~rg~~~~~~~~~~~~g~~~~~~l~~~~~~~~~~w~~~f~~~~~~~~i~~~~~~~~~~~~~~~~~~~-~~~~~--- 221 (438)
T TIGR00712 146 WWSQSERGTIVSIWNCAHNIGGGIPPLLVLLGMAWFNDWHAALYFPAICAIIVALFAFAMMRDTPQSCGLP-PIEEY--- 221 (438)
T ss_pred hcCcccchhHHHHHHHHHHhHhHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHhccCCHHhcCCC-Cchhc---
Confidence 9999999999999999999999998766 44343 469999999999988887656677788876421000 00000
Q ss_pred HHhhCCCcCCccchhhhhhhccCCCCcccccccccchhhhhhhhcchhHHHHHHHHHHHHHHHHHHHhhhhhcccc-cCC
Q 041759 275 IKSLSPIKDSNQLSLSLVSAVSFGHEPAASSKESSFLSSIRELFVRRWALERTLALMVPGFGIGVVYYGMTLGIEN-LGF 353 (525)
Q Consensus 275 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~ 353 (525)
+++. +.+ ..++++.+.+.+ ....+.+++++.++...+..++............|.++++ .|.
T Consensus 222 -------~~~~--~~~----~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~g~ 284 (438)
T TIGR00712 222 -------RNDY--PDD----YNEKAEQELTAK----EIFMQYVLPNKLLWYIAIANVFVYLLRYGVLDWSPTYLKEVKHF 284 (438)
T ss_pred -------cccc--ccc----cccccccccchH----HHHHHHHccCchHHHHHHHHHHHHHHHHHHHHhHHHHHHHccCC
Confidence 0000 000 000000000000 0112346788877766555555544443344445665554 688
Q ss_pred hhHHHHHHHHHhcccccccCchhHHHHHHHHHhhcChhHHHHHHHHHHHH--HHHHHHhccccccchhHHHHHHHHHHHH
Q 041759 354 DIYLGVVFNALLEIPNLASTIPSFFLTFFLIQKWNRKSSLLVLFIISGIC--SIMAVVANDISNAGKRMRIGLELASLFS 431 (525)
Q Consensus 354 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~d~~g~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 431 (525)
+....+.......+ +.+++.++.+++.||+++++....+.....+. .++....... .+........+..+++
T Consensus 285 s~~~~~~~~~~~~~----~~~ig~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~g~~ 358 (438)
T TIGR00712 285 ALDKSSWAYFLYEY----AGIPGTLLCGWMSDKVFKGNRGATGVFFMTLVTIAVIVYWMNPA--GNPLVDMICMIVIGFL 358 (438)
T ss_pred ChhhHHHHHHHHHH----HHHHHHHHHHHHHHHhccCcccHHHHHHHHHHHHHHHHHHhcCC--CchHHHHHHHHHHHHH
Confidence 87777776666655 66689999999999996443222232222211 1111111111 1122222222333332
Q ss_pred HHHHHHHHHhhhccccCcchhhhhhHHHHHHHHHHH-HHHHHHHhh--ccCchhHHHHHHHHHHHHHHHH-HHhccCCC
Q 041759 432 AYIAYTVIFIYAIELFPTCVRNSATSIMRLAIIFAA-IFSSVLVAA--GSNNEFVSYGVFGLVIICCGFF-VICLPETR 506 (525)
Q Consensus 432 ~~~~~~~~~~~~~~~~p~~~r~~~~~~~~~~~~~g~-~~~p~i~~~--~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~ 506 (525)
.............|.+|++.|+++.|+.+....+|+ .++|.+.|. +..++...+.+.+++.+++.+. .+.++|.|
T Consensus 359 ~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~gg~~~gp~l~G~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~ 437 (438)
T TIGR00712 359 IYGPVMLIGLHALELAPKKAAGTAAGFTGLFGYLGGSVAASAIVGYTVDFFGWDGGFMVMIGGSILAVILLIVVMIGEK 437 (438)
T ss_pred HccHHHHHHHHHHHhcChhheeeehhhhchHHHhhhhhhcchhHHHHHHhccchHHHHHHHHHHHHHHHHHHHHHhhcc
Confidence 222222223467799999999999999998888774 688999884 3335667777666666555544 34445543
No 48
>PRK03633 putative MFS family transporter protein; Provisional
Probab=99.98 E-value=7.8e-30 Score=250.64 Aligned_cols=360 Identities=15% Similarity=0.143 Sum_probs=260.3
Q ss_pred HHHHHHHHHHHHHHHHHhhhcccCccccccCCCCCCCCCCCCCCCCCCceecCCCCccccceeeccccccchhhhhhhHH
Q 041759 42 AILVSLASLFDSQQSFISVYTEAEPTWHCLNNTTCSSASNICMFPKSSWAWDGNPTTTALTIISEWGLECSSAFIKGLPA 121 (525)
Q Consensus 42 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~c~~~~~~~~~~~~p~~~~~~i~~~~~~~~~s~~~~g~~~ 121 (525)
+..+.++.++........... +|.+.+++|+ |..+.|++.
T Consensus 8 ~~~~~~~~~~~~~~~~~~~~~-------------------------------------lp~~~~~~~~---s~~~~G~~~ 47 (381)
T PRK03633 8 VLLLLCGLLLLTLAIAVLNTL-------------------------------------VPLWLAQEHL---PTWQVGVVS 47 (381)
T ss_pred HHHHHHHHHHHHHhhhhHHHH-------------------------------------HHHHHHHcCC---CHHHHHHHH
Confidence 555667777777777777777 8999999999 999999999
Q ss_pred HHHHHHHHHhHHhhHhcccccCCchHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHhhcccchhhhhheeeEeeecCc
Q 041759 122 ASHFTGCLLGIVFLATLADSSLGRKNLLFLSCLTMSVATSLTIFSNNLWIYSLLRFFSGISRATIGTCTIVLLTEKVGTE 201 (525)
Q Consensus 122 s~~~lg~~~~~~~~G~l~dr~~Grk~~~~~~~~~~~i~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~ 201 (525)
+.+.++..+++++.|+++|| +|||+++..+.++.+++.+++++++|++.++++|+++|++.+...+...+.+.+..+++
T Consensus 48 s~~~l~~~~~~~~~g~l~dr-~g~k~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~G~~~~~~~~~~~~~~~~~~~~~ 126 (381)
T PRK03633 48 SSYFTGNLVGTLLAGYVIKR-IGFNRSYYLASLIFAAGCAGLGLMVGFWSWLAWRFVAGIGCAMIWVVVESALMCSGTSR 126 (381)
T ss_pred HHHHHHHHHHHHhHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHH
Confidence 99999999999999999999 99999999999999999999999999999999999999999988888887778888899
Q ss_pred chhhHHhHHHHHHHHHHHHHHHHHHhccCCchHHHHHHHHHHHHHHHhHhheeecCCchHhhhcCCHHHHHHHHHhhCCC
Q 041759 202 WRGLVGILDSFFFTIGTLTLPAIAYTNRSSSWTIIYLWTSIPTLVYSGLLYIFVSESPRWLFMQGRQEEAVEVIKSLSPI 281 (525)
Q Consensus 202 ~r~~~~~~~~~~~~~G~~l~~~l~~~~~~~~wr~~f~~~~~~~~~~~~~~~~~lpesp~~~~~~~~~~~~~~~~~~~~~~ 281 (525)
+|+++++++..+.++|..+||.++..+....++...+..+........+.....++++ + +
T Consensus 127 ~~~~~~~~~~~~~~~g~~~g~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~------------~- 186 (381)
T PRK03633 127 NRGRLLAAYMMVYYLGTVLGQLLVSKVSTELMSVLPWVTGLVLAAILPLLFTRILNQQ-------A------------E- 186 (381)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhcccccccchHHHHHHHHHHHHHHHHHhcccCCC-------C------------C-
Confidence 9999999999999999999999966554322222222222222211111111111110 0 0
Q ss_pred cCCccchhhhhhhccCCCCcccccccccchhhhhhhhcchhHHHHHHHHHHHHHHHHHHHhhhhhcccccCChhHHHHHH
Q 041759 282 KDSNQLSLSLVSAVSFGHEPAASSKESSFLSSIRELFVRRWALERTLALMVPGFGIGVVYYGMTLGIENLGFDIYLGVVF 361 (525)
Q Consensus 282 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 361 (525)
+ + ++ .+.++.+++|.++......+.........+..+|.+.++.|.+....+..
T Consensus 187 ~-----------------~----~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lp~~~~~~g~s~~~~g~~ 240 (381)
T PRK03633 187 N-----------------H----DS-----TSIWPMLKLRQARLGVNGCIISGIVLGSLYGLMPLYLNHQGMSDASIGFW 240 (381)
T ss_pred C-----------------C----CC-----CCHHHHHHhcchHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHH
Confidence 0 0 00 13445667776554333233333333444455677777778887777777
Q ss_pred HHHhcccccccCchhHHHHHHHHHhhcChhHHHHHHHHHHHHHHHHHHhccccccchhHHHHHHHHHHHHHHHHHHHHHh
Q 041759 362 NALLEIPNLASTIPSFFLTFFLIQKWNRKSSLLVLFIISGICSIMAVVANDISNAGKRMRIGLELASLFSAYIAYTVIFI 441 (525)
Q Consensus 362 ~~~~~~~~~~~~~~~~~~~~~l~d~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 441 (525)
.+...+ +.+++.+..+++.||+++|+.+..+..+..++.+.+. ... .......+.+.+.....|...+
T Consensus 241 ~~~~~~----~~~~~~~~~g~l~dr~~~~~~l~~~~~~~~~~~~~~~--~~~------~~~~~~~l~g~~~~~~~p~~~~ 308 (381)
T PRK03633 241 MALLVS----AGILGQWPIGRLADRFGRLLVLRVQVFVVILGSIAML--SQA------AMAPALFILGAAGFTLYPVAMA 308 (381)
T ss_pred HHHHHH----HHHHHHhhhHHHHHHcCcHHHHHHHHHHHHHHHHHHh--hhH------HHHHHHHHHHHHHHhHHHHHHH
Confidence 766666 7778999999999999999998888777776655443 111 1222334445555566788888
Q ss_pred hhccccCcchhhhhhHHHHHHHHHHHHHHHHHHhh--ccCchhHHHHHHHHHHHHHHHHHH
Q 041759 442 YAIELFPTCVRNSATSIMRLAIIFAAIFSSVLVAA--GSNNEFVSYGVFGLVIICCGFFVI 500 (525)
Q Consensus 442 ~~~~~~p~~~r~~~~~~~~~~~~~g~~~~p~i~~~--~~~~~~~~~~~~~~~~~~~~~~~~ 500 (525)
.+.|..|++.++...+..+....+|..++|.+.|+ +..+....|.+.+.+.++..+..+
T Consensus 309 ~~~~~~~~~~~~~~~~~~~~~~~lG~~igp~~~G~l~~~~g~~~~f~~~~~~~l~~~~~~~ 369 (381)
T PRK03633 309 WACEKVEHHELVAMNQALLLSYTVGSLLGPSFTAMLMQNYSDNLLFIMIASVSFIYLLMLL 369 (381)
T ss_pred HHHccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCccHHHHHHHHHHHHHHHHHH
Confidence 88899988887888888888889999999999995 334566677777666665544433
No 49
>KOG2533 consensus Permease of the major facilitator superfamily [Carbohydrate transport and metabolism]
Probab=99.98 E-value=2.5e-30 Score=253.92 Aligned_cols=364 Identities=15% Similarity=0.155 Sum_probs=275.0
Q ss_pred HHHHHHHHHHHHHHHHHHhhhcccCccccccCCCCCCCCCCCCCCCCCCceecCCCCccccceeeccccccchhhhhhhH
Q 041759 41 QAILVSLASLFDSQQSFISVYTEAEPTWHCLNNTTCSSASNICMFPKSSWAWDGNPTTTALTIISEWGLECSSAFIKGLP 120 (525)
Q Consensus 41 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~c~~~~~~~~~~~~p~~~~~~i~~~~~~~~~s~~~~g~~ 120 (525)
++..+++.++....|..+++.+ . ...+.+|.+. ...+.+.+
T Consensus 46 i~~~~~~~y~~~~~d~~si~~a----------------------------------~--l~g~~edl~~---~~~~l~~~ 86 (495)
T KOG2533|consen 46 ILPFLCYLYFHAYLDKSSIVNA----------------------------------S--LSGLKEDLKL---VGNQLGVL 86 (495)
T ss_pred HHHHHHHHHHHHhcchhcchhH----------------------------------H--HcCCccccch---hhhhhhhH
Confidence 7777888888889998888877 2 5668899999 99999999
Q ss_pred HHHHHHHHHHhHHhhHhcccccCCchHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHhhcccchhhhhheeeEeeecC
Q 041759 121 AASHFTGCLLGIVFLATLADSSLGRKNLLFLSCLTMSVATSLTIFSNNLWIYSLLRFFSGISRATIGTCTIVLLTEKVGT 200 (525)
Q Consensus 121 ~s~~~lg~~~~~~~~G~l~dr~~Grk~~~~~~~~~~~i~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~ 200 (525)
.++++++++++++++|.+.|| ++..+.+....+++++..++....+|++.+++.|++.|+..+..+|....+++.|+.+
T Consensus 87 ~t~F~v~Yii~~~p~~~L~~r-~~ls~~l~~~~~~w~~~~~~~~~~~s~~~~ialr~llGl~es~~wP~~~~~lg~wy~~ 165 (495)
T KOG2533|consen 87 DTVFYVGYIIGQFPSGLLGDR-FPLSKGLSVSGILWGLFGFLTAAVHSFPGLIALRFLLGLFESGGWPGVVAILGNWYGK 165 (495)
T ss_pred HHHHHHHHHHHHhhHHHHHHh-CChHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHhcccchHHHHHHHhhcCh
Confidence 999999999999999999999 9999999999999999998888899999999999999999999999999999999999
Q ss_pred cchhhHHhHHHHHHHHHHHHHHHHHHh-------ccCCchHHHHHHHHHHHHHHHhHhheeecCCch--HhhhcCCHHHH
Q 041759 201 EWRGLVGILDSFFFTIGTLTLPAIAYT-------NRSSSWTIIYLWTSIPTLVYSGLLYIFVSESPR--WLFMQGRQEEA 271 (525)
Q Consensus 201 ~~r~~~~~~~~~~~~~G~~l~~~l~~~-------~~~~~wr~~f~~~~~~~~~~~~~~~~~lpesp~--~~~~~~~~~~~ 271 (525)
++|++.++++.+..++|.++|.++++. ....||||.|++.+++.++..++.++++|+.|. |...+++.+-.
T Consensus 166 ~e~g~r~~~~~a~~~~g~i~ggliA~g~~~~~~~~~~~gW~~~FiI~G~i~~~~gi~~f~~lp~~P~~~~fl~~~ek~~~ 245 (495)
T KOG2533|consen 166 SERGLRMGIWYASASLGNIFGGLIAYGVFKLNGSGGLAGWRWLFIIEGVITLVLGIVVFFFLPDNPSKAWFLTDEEKELV 245 (495)
T ss_pred hhhhhhHHHHHHhcchhhHHHHHHHHHhhhhcCCCCcCCceeehhHHHHHHHHHHheEEEEecCChhhccccchHHHHHH
Confidence 999999999999999999999999776 346799999999999999999899999999986 22111111000
Q ss_pred HHHHHhhCCCcCCccchhhhhhhccCCCCcccccccccchhhhhhhhcchhHHHHHHHHHHHHHHHHHHHhhhhhcccc-
Q 041759 272 VEVIKSLSPIKDSNQLSLSLVSAVSFGHEPAASSKESSFLSSIRELFVRRWALERTLALMVPGFGIGVVYYGMTLGIEN- 350 (525)
Q Consensus 272 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~- 350 (525)
.++..+ .+..... ++ .....+++.+++|..|...+..++.........+.+|+++++
T Consensus 246 ---~~~~~~-~~~~~~~-------------~~-----~~~~~~~~a~~dp~vw~~~l~~~~~~lv~~~~~~~lpl~l~~~ 303 (495)
T KOG2533|consen 246 ---VERLRE-SPSGGIE-------------NK-----FKWKGFKEALKDPGVWPFSLCYFFLKLVNYGFSYWLPLYLKSN 303 (495)
T ss_pred ---HHHHHh-ccCCCcc-------------cc-----cCHHHHHHHHhchhHHHHHHHHHHHhhccccHHHHHHHHHHcC
Confidence 111100 0000000 00 112588999999998888888887777777677777888877
Q ss_pred cCChhHHHHHHHHHhcccccccCchhHHHHHHHHHh----hcChhHHHHHHHHHHHHH-HHHHHhccccccchhHHHHHH
Q 041759 351 LGFDIYLGVVFNALLEIPNLASTIPSFFLTFFLIQK----WNRKSSLLVLFIISGICS-IMAVVANDISNAGKRMRIGLE 425 (525)
Q Consensus 351 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~d~----~g~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~ 425 (525)
.+++..++..+.....+ +.+++.+++++++|| ..+|........+..+.. ..+...... .......
T Consensus 304 ~~~s~~~a~~ls~~~~~----~g~v~~i~ag~lsdr~~~~~~~~~~~~~~~~~~~~~g~~~l~~~~~~-----~~~~~~~ 374 (495)
T KOG2533|consen 304 GGYSELQANLLSTPYDV----GGIVGLILAGYLSDRLKTIFARRLLFIVFLCLYAIIGAISLLAAAVL-----PGAYGAF 374 (495)
T ss_pred CCcChHHhccccchHHh----hhHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHHhhccc-----hHHhHHH
Confidence 55777777766666655 888999999999999 556655555555554444 333333222 2344445
Q ss_pred HHHHHHHHHHHHHHHhhhccccCcchhhhh-hHHHHHHHHHHHHHHHHHHh
Q 041759 426 LASLFSAYIAYTVIFIYAIELFPTCVRNSA-TSIMRLAIIFAAIFSSVLVA 475 (525)
Q Consensus 426 ~~~~~~~~~~~~~~~~~~~~~~p~~~r~~~-~~~~~~~~~~g~~~~p~i~~ 475 (525)
+....+.....+.......+....+.|... .+........+++++|.+.-
T Consensus 375 ~~~~~~~~~~~~~~~~w~s~~~~g~~k~~~~~~~~i~~~~s~~~~~~~~~~ 425 (495)
T KOG2533|consen 375 LIGPYGLIATAIIALSWTSANLAGNTKALTTVSAIIDGTGSAGAISGQLFR 425 (495)
T ss_pred HhcchhhHHHHHHHHhhccccccchHHhHHHHhhhhcchhHHHHhhhhhcc
Confidence 555566666677778888877765554443 34444444666666665554
No 50
>PRK15034 nitrate/nitrite transport protein NarU; Provisional
Probab=99.98 E-value=1.2e-29 Score=246.89 Aligned_cols=349 Identities=9% Similarity=-0.001 Sum_probs=246.6
Q ss_pred ccceee-ccccccchhhhhhhHHHHHHHHHHHhHHhhHhcccccCCchHHHHHHHHHHHHHHHHHHhh-----hhHHHHH
Q 041759 100 ALTIIS-EWGLECSSAFIKGLPAASHFTGCLLGIVFLATLADSSLGRKNLLFLSCLTMSVATSLTIFS-----NNLWIYS 173 (525)
Q Consensus 100 ~~~i~~-~~~~~~~s~~~~g~~~s~~~lg~~~~~~~~G~l~dr~~Grk~~~~~~~~~~~i~~~~~~~~-----~~~~~l~ 173 (525)
.+.+.+ |+|+ |..|.+++.+++.+++.++.++.|++.|| +|.|+++.++.++.++.+++.+++ ++++.++
T Consensus 57 ~~~~~~~~~~l---s~~q~g~l~ai~~l~~al~rip~G~l~Dr-~G~R~v~~~~~ll~~i~~~~~~~a~~~~~~s~~~ll 132 (462)
T PRK15034 57 TVNLNKIGFNF---TTDQLFLLTALPSVSGALLRVPYSFMVPI-FGGRRWTVFSTAILIIPCVWLGIAVQNPNTPFGIFI 132 (462)
T ss_pred HHHhhhhhcCC---CHHHHHHHHHHHHHHHHHHHHHHHHHHHH-hCChHHHHHHHHHHHHHHHHHHHHHcccCCCHHHHH
Confidence 677765 8999 99999999999999999999999999999 999999999999999999999987 8999999
Q ss_pred HHHHHHhhcccchhhhhheeeEeeecCcchhhHHhHHHHHHHHHHHHHHHHHH------hcc-------------CCchH
Q 041759 174 LLRFFSGISRATIGTCTIVLLTEKVGTEWRGLVGILDSFFFTIGTLTLPAIAY------TNR-------------SSSWT 234 (525)
Q Consensus 174 ~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~l~~~l~~------~~~-------------~~~wr 234 (525)
+.|++.|++ +..++.....+++|+|+++||+++++.....++|..+++++.. +.. ..+||
T Consensus 133 i~r~l~Gig-g~~f~~~~~~vs~wfp~~~rG~A~Gi~~g~G~~G~~l~~~l~p~~i~~~l~~~~G~~~~~~~~g~~~~~~ 211 (462)
T PRK15034 133 VIALLCGFA-GANFASSMGNISFFFPKAKQGSALGINGGLGNLGVSVMQLVAPLVIFVPVFAFLGVNGVPQADGSVMSLA 211 (462)
T ss_pred HHHHHHHHH-HHhHHHHHHHHHHHCCHhHhHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHhccccccccccchHHHH
Confidence 999999998 6688999999999999999999999997666666655443321 111 23488
Q ss_pred HHHHHHHHHHHHHHhHhheeecCCchHhhhcCCHHHHHHHHHhhCCCcCCccchhhhhhhccCCCCcccccccccchhhh
Q 041759 235 IIYLWTSIPTLVYSGLLYIFVSESPRWLFMQGRQEEAVEVIKSLSPIKDSNQLSLSLVSAVSFGHEPAASSKESSFLSSI 314 (525)
Q Consensus 235 ~~f~~~~~~~~~~~~~~~~~lpesp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 314 (525)
.+.++..++.++..++.+++.++.|. .+. .....
T Consensus 212 ~~~~~~~~~~iv~~i~~~~~~~~~~~-----~~~-----------------------------------------~~~~~ 245 (462)
T PRK15034 212 NAAWIWVPLLAIATIAAWSGMNDIAS-----SRA-----------------------------------------SIADQ 245 (462)
T ss_pred HHHHHHHHHHHHHHHHHHHhCCCccc-----ccc-----------------------------------------CHHHH
Confidence 88888888887777555555544321 000 00245
Q ss_pred hhhhcchhHHHHHHHHHHHHHHHHHHHhhhhhcccccCChhHHHHHHHHHhcccccccCchhHHHHHHHHHhhcChhHHH
Q 041759 315 RELFVRRWALERTLALMVPGFGIGVVYYGMTLGIENLGFDIYLGVVFNALLEIPNLASTIPSFFLTFFLIQKWNRKSSLL 394 (525)
Q Consensus 315 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~d~~g~~~~~~ 394 (525)
++++|+|..|...+..+..+.......+.+|++.++ .++.........+..+ ...++++++|+++||+|+++++.
T Consensus 246 ~~vlk~~~~Wllslly~~tFG~fvg~s~~lp~~~~~-~~~~~~~l~~~~l~~l----~~~l~rplgG~LADRiG~~~vl~ 320 (462)
T PRK15034 246 LPVLQRLHLWLLSLLYLATFGSFIGFSAGFAMLAKT-QFPDVNILRLAFFGPF----IGAIARSVGGAISDKFGGVRVTL 320 (462)
T ss_pred HHHhCCCchhHHHHHHHHHHHHHHHHHHHHHHHHHH-HcChHHHHHHHHHHHH----HHHHHHHhhHHHHHhcCchHHHH
Confidence 678899987777666655554444445455665544 2221111111111122 34478899999999999999999
Q ss_pred HHHHHHHHHHHHHHHh-ccccccchhHHHHHHHHHHHHHHHHHHHHHhhhccccCc---------------------chh
Q 041759 395 VLFIISGICSIMAVVA-NDISNAGKRMRIGLELASLFSAYIAYTVIFIYAIELFPT---------------------CVR 452 (525)
Q Consensus 395 ~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~---------------------~~r 452 (525)
++++.+.+....+... +.....+.....+..+...++.+......+-++++.+|+ ++-
T Consensus 321 ~~~i~~~i~~~~~~l~lp~~~~~~~~~~~~~~~~l~~~~G~gngsvfk~ip~~f~~~~~~~~~~~~~~~~~~~~~~~~~~ 400 (462)
T PRK15034 321 INFIFMAIFSALLFLTLPGTGSGNFIAFYAVFMGLFLTAGLGSGSTFQMIAVIFRQITIYRVKMKGGSDEQAQREAVTET 400 (462)
T ss_pred HHHHHHHHHHHHHHHHhccccccHHHHHHHHHHHHHHHhcccchHHHHhhHHHHhhhhhhcccccccchhHHhhHHHHHH
Confidence 9888777766443332 221111233344444444455566666777777777774 145
Q ss_pred hhhhHHHHHHHHHHHHHHHHHHhhc---cCchhHHHHHHHHHHHHHHHHHHhccC
Q 041759 453 NSATSIMRLAIIFAAIFSSVLVAAG---SNNEFVSYGVFGLVIICCGFFVICLPE 504 (525)
Q Consensus 453 ~~~~~~~~~~~~~g~~~~p~i~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~ 504 (525)
|.+.|+....+.+|+++.|.+.|.. ..++...++.+.+..+++.++.++...
T Consensus 401 g~v~G~v~a~G~~Ggf~~p~~~g~~~~~~g~~~~~~~~~~~~~~~~~~~~w~~y~ 455 (462)
T PRK15034 401 AAALGFISAIGAVGGFFIPQAFGMSLNMTGSPVGAMKVFLIFYIVCVLLTWLVYG 455 (462)
T ss_pred HHHHHHHHHHHHcccchhhHHHHHHHHHcCCcHHHHHHHHHHHHHHHHHHHHHhc
Confidence 7888999999999999999888742 234666777777777777776655433
No 51
>PRK15403 multidrug efflux system protein MdtM; Provisional
Probab=99.98 E-value=1.2e-29 Score=250.96 Aligned_cols=345 Identities=13% Similarity=0.108 Sum_probs=240.8
Q ss_pred ccceeeccccccchhhhhhhHHHHHHHHHHHhHHhhHhcccccCCchHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHH
Q 041759 100 ALTIISEWGLECSSAFIKGLPAASHFTGCLLGIVFLATLADSSLGRKNLLFLSCLTMSVATSLTIFSNNLWIYSLLRFFS 179 (525)
Q Consensus 100 ~~~i~~~~~~~~~s~~~~g~~~s~~~lg~~~~~~~~G~l~dr~~Grk~~~~~~~~~~~i~~~~~~~~~~~~~l~~~r~l~ 179 (525)
+|.+.+++|. +..+.++..+++.+++.++++++|+++|| +|||++++.+.++++++++++++++|++.++++|+++
T Consensus 39 l~~i~~~~~~---~~~~~~~~~s~~~~~~~~~~~~~G~l~dr-~Grr~~l~~~~~~~~~~~~~~~~a~~~~~l~~~r~l~ 114 (413)
T PRK15403 39 IINVVRDFNA---DVSLAPASVSLYLAGGMALQWLLGPLSDR-IGRRPVLITGALIFTLACAATLFTTSMTQFLIARFIQ 114 (413)
T ss_pred HHHHHHHhCC---CHHHHHHHHHHHHHHHHHHHHhhhHHHHH-cCchHHHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHH
Confidence 8999999999 99999999999999999999999999999 9999999999999999999999999999999999999
Q ss_pred hhcccchhhhhheeeEeeecCcchhhHHhHHHHHHHHHHHHHHHHHH-hccCCchHHHHHHHHHHHHHHHhHhheeecCC
Q 041759 180 GISRATIGTCTIVLLTEKVGTEWRGLVGILDSFFFTIGTLTLPAIAY-TNRSSSWTIIYLWTSIPTLVYSGLLYIFVSES 258 (525)
Q Consensus 180 G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~l~~~l~~-~~~~~~wr~~f~~~~~~~~~~~~~~~~~lpes 258 (525)
|++.+...+....++.|++|+++|++++++...+..+|.++||+++. +.+..+||+.|++.+++.++..+..++.+||+
T Consensus 115 Gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~lg~~l~~~~gw~~~f~~~~~~~~i~~~~~~~~lp~~ 194 (413)
T PRK15403 115 GTSICFIATVGYVTVQEAFGQTKGIKLMAIITSIVLVAPIIGPLSGAALMHFVHWKVLFAIIAVMGLIAFVGLLLAMPET 194 (413)
T ss_pred HHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHhCCCC
Confidence 99998777777788999999999999999999999999999999965 44567999999999988887774555667886
Q ss_pred chHhhhcCCHHHHHHHHHhhCCCcCCccchhhhhhhccCCCCcccccccccchhhhhhhhcchhHHHHHHHHHHHHHHHH
Q 041759 259 PRWLFMQGRQEEAVEVIKSLSPIKDSNQLSLSLVSAVSFGHEPAASSKESSFLSSIRELFVRRWALERTLALMVPGFGIG 338 (525)
Q Consensus 259 p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~ 338 (525)
++. +++....+ ...+.+++++++|.++...+...+......
T Consensus 195 ~~~---~~~~~~~~------------------------------------~~~~~~~~ll~~~~~~~~~l~~~~~~~~~~ 235 (413)
T PRK15403 195 VKR---GAVPFSAK------------------------------------SVLRDFRNVFRNRLFLTGAATLSLSYIPMM 235 (413)
T ss_pred ccc---cCCCCChH------------------------------------HHHHHHHHHHcCHHHHHHHHHHHHHHHHHH
Confidence 420 00000000 001356778899987776665555444444
Q ss_pred HHHhhhhhcccc-cCChhHHHHHHHHHhcccccccCchhHHHHHHHHHhhcChhHHHHHHHHHHHHHHHHHHhc--cccc
Q 041759 339 VVYYGMTLGIEN-LGFDIYLGVVFNALLEIPNLASTIPSFFLTFFLIQKWNRKSSLLVLFIISGICSIMAVVAN--DISN 415 (525)
Q Consensus 339 ~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~d~~g~~~~~~~~~~~~~~~~~~~~~~~--~~~~ 415 (525)
......|.++++ .|.+....+........ +.+++..+.+++.++..+++.......+..++.+++.... ..
T Consensus 236 ~~~~~~P~~l~~~~g~s~~~~gl~~~~~~~----~~~i~~~l~~~~~~~~~~~~~~~~~~~~~~ig~~l~~~~~~~~~-- 309 (413)
T PRK15403 236 SWVAVSPVILIDAGGMTTSQFAWTQVPVFG----AVIVANAIVARFVKDPTEPRFIWRAVPIQLVGLALLIVGNLLWP-- 309 (413)
T ss_pred HHHHhChHHHHHhcCCCHHHHHHHHHHHHH----HHHHHHHHHHHHhccCCchhHHHHHHHHHHHHHHHHHHHHHHcc--
Confidence 444445666555 57887777766544444 4446666666665444443433222222222222222111 11
Q ss_pred cchhHHHHHHHHHHHHHHHHHHHHHhhhccccCcchhhhhhHHHHHHHHHHHHHHHHHHhhc-cCchhHHHHHHHHHHHH
Q 041759 416 AGKRMRIGLELASLFSAYIAYTVIFIYAIELFPTCVRNSATSIMRLAIIFAAIFSSVLVAAG-SNNEFVSYGVFGLVIIC 494 (525)
Q Consensus 416 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~r~~~~~~~~~~~~~g~~~~p~i~~~~-~~~~~~~~~~~~~~~~~ 494 (525)
..+...++..++.+++.+...+......-... ...+|++.++.+.....+...++...++. ..+....+...++++.+
T Consensus 310 ~~~~~~~~~~~l~~~G~~~~~p~~~~~al~~~-~~~~G~a~a~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~ 388 (413)
T PRK15403 310 HVWLWSVLGTSLYAFGIGLIFPTLFRFTLFSN-NLPKGTVSASLNMVILMVMAVSVEIGRWLWFNGGRLPFHLLAVVAGV 388 (413)
T ss_pred ccHHHHHHHHHHHHHHHHHHhHHHHHHHhccC-CCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHcCCchHHHHHHHHHHH
Confidence 12323455666677777777776664332222 22368888888888877777777777642 33455666555554443
No 52
>TIGR00892 2A0113 monocarboxylate transporter 1.
Probab=99.98 E-value=8.5e-31 Score=262.44 Aligned_cols=365 Identities=14% Similarity=0.052 Sum_probs=253.4
Q ss_pred ccceeeccccccchhhhhhhHHHHHHHHHHHhHHhhHhcccccCCchHHHHHHHHHHHHHHHHHHhhhhHHHHHH-HHHH
Q 041759 100 ALTIISEWGLECSSAFIKGLPAASHFTGCLLGIVFLATLADSSLGRKNLLFLSCLTMSVATSLTIFSNNLWIYSL-LRFF 178 (525)
Q Consensus 100 ~~~i~~~~~~~~~s~~~~g~~~s~~~lg~~~~~~~~G~l~dr~~Grk~~~~~~~~~~~i~~~~~~~~~~~~~l~~-~r~l 178 (525)
+|++.+++|+ +..+.+++.+.+.++..++.++.|+++|| +|||++++.+.++.++++++++++++++.+++ .|++
T Consensus 42 ~~~i~~~~g~---s~~~~~~~~s~~~~~~~~~~~~~G~l~dr-~g~r~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l 117 (455)
T TIGR00892 42 FKELQQIFQA---TYSETAWISSIMLAVLYAGGPISSILVNR-FGCRPVVIAGGLLASLGMILASFSSNVIELYLTAGFI 117 (455)
T ss_pred HHHHHHHhCc---chhHHHHHHHHHHHHHHHhhHHHHHHHHH-cCchHHHHhhHHHHHHHHHHHHHhhhHHHHHHHHHHH
Confidence 8899999999 99999999999999999999999999999 99999999999999999999999999998875 5799
Q ss_pred HhhcccchhhhhheeeEeeecCcchhhHHhHHHHHHHHHHHHHHHH-HHhccCCchHHHHHHHHHHHHHHHhHhheeecC
Q 041759 179 SGISRATIGTCTIVLLTEKVGTEWRGLVGILDSFFFTIGTLTLPAI-AYTNRSSSWTIIYLWTSIPTLVYSGLLYIFVSE 257 (525)
Q Consensus 179 ~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~l~~~l-~~~~~~~~wr~~f~~~~~~~~~~~~~~~~~lpe 257 (525)
.|++.+...+...+++.++++ ++|+++.++.+.+..+|..++|.+ +.+...+|||+.|++.+++.++..+..++..++
T Consensus 118 ~G~~~~~~~~~~~~~~~~~~~-~~r~~a~g~~~~~~~~g~~~~~~l~~~l~~~~gwr~~f~~~~~~~~~~~v~~~~~~~~ 196 (455)
T TIGR00892 118 TGLGLAFNFQPSLTMLGKYFY-RRRPLANGLAMAGSPVFLSTLAPLNQYLFESFGWRGSFLILGGLLLHCCVCGALMRPV 196 (455)
T ss_pred HHhcchhhhhHHHHHHHHHHH-hhHHHHHHHHHhcccHHHHHHHHHHHHHHHHhChHHHHHHHHHHHHHHHHHHHHhCCC
Confidence 999999777777788889886 789999999999999999999887 566677899999999998887665333333332
Q ss_pred CchHhhhcCCHHHHHHHHHhhCCCcCCccchhhhhhhccCCCCcccccccccchhhhhhhhcchhHHHHHHHHHHHHHHH
Q 041759 258 SPRWLFMQGRQEEAVEVIKSLSPIKDSNQLSLSLVSAVSFGHEPAASSKESSFLSSIRELFVRRWALERTLALMVPGFGI 337 (525)
Q Consensus 258 sp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~ 337 (525)
.+.. .+.+.++ + . ..+++...+ + .+.....++.+. ....+++++|.++......++...+.
T Consensus 197 ~~~~--~~~~~~~-~-------~-~~~~~~~~~------~-~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~l~~~~~ 257 (455)
T TIGR00892 197 GPSQ--RVSKSKS-K-------E-GLPPDGSTK------K-LSKKSTAEKINR-FLDFSLFTHRGFLVYLSGNVIMFLGF 257 (455)
T ss_pred Cccc--ccccccc-c-------c-cCCCCCccc------c-ccccchhhhhhh-hcchHHhcCchHHHHHHHHHHHHHHc
Confidence 2110 0000000 0 0 000000000 0 000000000000 01124778887665555544444444
Q ss_pred HHHHhhhhhcccccCChhHHHHHHHHHhcccccccCchhHHHHHHHHHhh--cChhHHHHHH--HHHHHHHHHHHHhccc
Q 041759 338 GVVYYGMTLGIENLGFDIYLGVVFNALLEIPNLASTIPSFFLTFFLIQKW--NRKSSLLVLF--IISGICSIMAVVANDI 413 (525)
Q Consensus 338 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~d~~--g~~~~~~~~~--~~~~~~~~~~~~~~~~ 413 (525)
......++.+.++.|.+....+...++..+ +.+++.++.+++.||. ++|+...++. ++.+++.++.....+
T Consensus 258 ~~~~~~l~~~~~~~g~s~~~~g~~~~~~~~----~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~l~~ll~~~~~~- 332 (455)
T TIGR00892 258 FAPIIFLVPYAKDKGVDEYEAAFLLSIIGF----VDIFARPSCGLIAGLKWIRPHVQYLFSFALLFNGLTHLLCALAGD- 332 (455)
T ss_pred cchHHHHHHHHHHcCCCHHHHHHHHHHHHH----HHHHHHHHHHHHhcccccCHHHHHHHHHHHHHHHHHHHHHHHhch-
Confidence 444444555566788888888888877777 7778888899999973 3343333322 222333333222222
Q ss_pred cccchhHHHHHHHHHHHHHHHHHHHHHhhhccccCcchhhhhhHHHHHHHHHHHHHHHHHHhhc--cC-chhHHHHHHHH
Q 041759 414 SNAGKRMRIGLELASLFSAYIAYTVIFIYAIELFPTCVRNSATSIMRLAIIFAAIFSSVLVAAG--SN-NEFVSYGVFGL 490 (525)
Q Consensus 414 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~r~~~~~~~~~~~~~g~~~~p~i~~~~--~~-~~~~~~~~~~~ 490 (525)
....++..++.+++.+...+...+++.|.+|+++++++.|+.+....+|++++|.+.|.. .. ++...|.+.++
T Consensus 333 ----~~~~~i~~~~~G~~~g~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~lg~~igp~i~G~l~~~~g~~~~~f~~~~~ 408 (455)
T TIGR00892 333 ----YTGLVIYCIFFGLSFGSVGALLFEVLMDLVGAQRFSSAVGLVTIVECCAVLIGPPLAGRLVDATKNYKYIFYASGS 408 (455)
T ss_pred ----HHHHHHHHHHHHHHhchHHHHHHHHHHHHhhHHHHhhHHhHHHHHHHHHHHccccceeeeehhcCCcchHHHHhhH
Confidence 334556677777888888888889999999999999999999999999999999999952 22 35566666666
Q ss_pred HHHHHHH
Q 041759 491 VIICCGF 497 (525)
Q Consensus 491 ~~~~~~~ 497 (525)
+.+++.+
T Consensus 409 ~~li~~~ 415 (455)
T TIGR00892 409 IVVSAGL 415 (455)
T ss_pred HHHHHHH
Confidence 5555443
No 53
>KOG2532 consensus Permease of the major facilitator superfamily [Carbohydrate transport and metabolism]
Probab=99.97 E-value=3.5e-30 Score=252.53 Aligned_cols=363 Identities=16% Similarity=0.176 Sum_probs=269.7
Q ss_pred eeccccccchhhhhhhHHHHHHHHHHHhHHhhHhcccccCCchHHHHHHHHHHHHHHHHHHhhh--hHHHHHHHHHHHhh
Q 041759 104 ISEWGLECSSAFIKGLPAASHFTGCLLGIVFLATLADSSLGRKNLLFLSCLTMSVATSLTIFSN--NLWIYSLLRFFSGI 181 (525)
Q Consensus 104 ~~~~~~~~~s~~~~g~~~s~~~lg~~~~~~~~G~l~dr~~Grk~~~~~~~~~~~i~~~~~~~~~--~~~~l~~~r~l~G~ 181 (525)
..++++ ++.+.|++.+.++.|+.+++++.|+++|| +|-|+++..+.++.++++++..++. +++.+++.|+++|+
T Consensus 65 ~~~~~w---s~~~k~~i~ss~~~G~i~~~iP~g~l~~k-~G~r~v~~~~~~~sa~~t~l~P~aa~~~~~~~~~~R~lqGl 140 (466)
T KOG2532|consen 65 AGEYDW---SSTEKGLIFSSFFWGYILGQIPGGYLADK-FGARRVFFISGLISALLTLLTPLAASIGFYLLLVLRFLQGL 140 (466)
T ss_pred CceecC---CHHHHHHHHHHHHHHHHHHHcCcHHHHHH-cCchHHHHHHHHHHHHHHHHHHHHHHhcchhhHHHHHHhHH
Confidence 678999 99999999999999999999999999999 9999999999999999999998874 56688999999999
Q ss_pred cccchhhhhheeeEeeecCcchhhHHhHHHHHHHHHHHHHHHH-HHhccC-CchHHHHHHHHHHHHHHHhHhheeecCCc
Q 041759 182 SRATIGTCTIVLLTEKVGTEWRGLVGILDSFFFTIGTLTLPAI-AYTNRS-SSWTIIYLWTSIPTLVYSGLLYIFVSESP 259 (525)
Q Consensus 182 ~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~l~~~l-~~~~~~-~~wr~~f~~~~~~~~~~~~~~~~~lpesp 259 (525)
+.|..+|....+.+.|.|++||++..++...+..+|.+++..+ |.+.+. .||+++|++.++.+++..++.+++..|+|
T Consensus 141 ~~g~~~pa~~~i~~~W~P~~Ers~~~ail~~g~q~g~v~~mp~sg~lc~s~~GW~sifY~~g~~g~i~~~~w~~~~~d~P 220 (466)
T KOG2532|consen 141 GQGVLFPAIGSILAKWAPPNERSTFIAILTAGSQLGTIITMPVSGLLCESSLGWPSIFYVFGIVGLIWFILWFLFYSDSP 220 (466)
T ss_pred HHhHHHhhhhceeeeECCHHHHHHHHHHHHHHHHHHHHHHHHhHHHHhccCCCCchHHHHHHHHHHHHHHHHHHHhcCCc
Confidence 9999999999999999999999999999999999999998766 777776 89999999999999999966666777877
Q ss_pred hHhhhcCCHHHHHHHHHhhCCCcCCccchhhhhhhccCCCCcccccccccchhhhhhhhcchhHHHHHHHHHHHHHHHHH
Q 041759 260 RWLFMQGRQEEAVEVIKSLSPIKDSNQLSLSLVSAVSFGHEPAASSKESSFLSSIRELFVRRWALERTLALMVPGFGIGV 339 (525)
Q Consensus 260 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~ 339 (525)
.. ++...+ +.++++.+ ...+...++ +...+++++++++.+|...+..+....+...
T Consensus 221 ~~---h~~is~--~El~~I~~----------------~k~~~~~~~---~~~vP~~~i~ts~~vwai~~~~f~~~~~~~~ 276 (466)
T KOG2532|consen 221 SK---HPNISE--KELKYIEK----------------GKSEAHVKK---KPPVPYKAILTSPPVWAIWISAFGGNWGFYL 276 (466)
T ss_pred cc---CCCCCH--HHHHHHHh----------------cccccccCC---CCCCCHHHHHcCHHHHHHHHHHHHHHHHHHH
Confidence 42 111100 11111100 000000000 0126899999999988777777666666655
Q ss_pred HHhhhhhccc-ccCChhHHHHHHHHHhcccccccCchhHHHHHHHHHhhcC---------hhHHHHHHHHHHHHHHHHHH
Q 041759 340 VYYGMTLGIE-NLGFDIYLGVVFNALLEIPNLASTIPSFFLTFFLIQKWNR---------KSSLLVLFIISGICSIMAVV 409 (525)
Q Consensus 340 ~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~d~~g~---------~~~~~~~~~~~~~~~~~~~~ 409 (525)
...+.|.|++ .++++...++.+.++..+ .+.+..+++|.++||+.+ |..-.++....+++++.+.+
T Consensus 277 l~~y~PtY~~~VL~f~v~~~G~~salP~l----~~~~~k~~~g~lsD~l~~~~ls~t~~rkifn~i~~~~~ai~l~~l~~ 352 (466)
T KOG2532|consen 277 LLTYLPTYLKEVLGFDVRETGFLSALPFL----AMAIVKFVAGQLSDRLTFRILSETTVRKIFNTIAFGGPAVFLLVLAF 352 (466)
T ss_pred HHHHhhHHHHHHhCCChhhhhHHHHHHHH----HHHHHHHHHHHHHHHHhhccCchHhHHHHHHhHHHHHHHHHHHeeee
Confidence 5555566665 489999999999999888 888999999999999855 23334566666666666666
Q ss_pred hccccccchhHHHHHHHHHHHHHHHHHHHHHhhhccccCcchhhhhhHHHHHHHHHHHHHHHHHHhhcc-C----chhHH
Q 041759 410 ANDISNAGKRMRIGLELASLFSAYIAYTVIFIYAIELFPTCVRNSATSIMRLAIIFAAIFSSVLVAAGS-N----NEFVS 484 (525)
Q Consensus 410 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~r~~~~~~~~~~~~~g~~~~p~i~~~~~-~----~~~~~ 484 (525)
.... +....++++.+.....+...+..+.-..+.. +++.+..+|+.+....+.++++|.+.+... . .+...
T Consensus 353 ~~~~---~~~~a~~~l~~~~~~~g~~~~Gf~~~~~~~a-pq~a~~l~g~~~~~~~~~~~~~P~~vg~~~~~~t~~eW~~V 428 (466)
T KOG2532|consen 353 TSDE---HRLLAVILLTIAIGLSGFNISGFYKNHQDIA-PQHAGFVMGIINFVGALAGFIAPLLVGIIVTDNTREEWRIV 428 (466)
T ss_pred cCCC---cchHHHHHHHHHHHHcccchhhhHhhhhhcc-chHHHHHHHHHHHHHHHHHHHHHHheeeEeCCCCHHHHHHH
Confidence 6554 1222333333322222333233333333334 456799999999999999999999999522 1 46677
Q ss_pred HHHHHHHHHHHHHHHHhc
Q 041759 485 YGVFGLVIICCGFFVICL 502 (525)
Q Consensus 485 ~~~~~~~~~~~~~~~~~~ 502 (525)
|.+.+++.+++.+++.+.
T Consensus 429 F~i~a~i~~~~~i~f~~f 446 (466)
T KOG2532|consen 429 FLIAAGILIVGNIIFLFF 446 (466)
T ss_pred HHHHHHHHHHhchheeEe
Confidence 888888887777665544
No 54
>PRK11102 bicyclomycin/multidrug efflux system; Provisional
Probab=99.97 E-value=1.2e-29 Score=249.41 Aligned_cols=357 Identities=18% Similarity=0.184 Sum_probs=250.9
Q ss_pred CCccccceeeccccccchhhhhhhHHHHHHHHHHHhHHhhHhcccccCCchHHHHHHHHHHHHHHHHHHhhhhHHHHHHH
Q 041759 96 PTTTALTIISEWGLECSSAFIKGLPAASHFTGCLLGIVFLATLADSSLGRKNLLFLSCLTMSVATSLTIFSNNLWIYSLL 175 (525)
Q Consensus 96 p~~~~~~i~~~~~~~~~s~~~~g~~~s~~~lg~~~~~~~~G~l~dr~~Grk~~~~~~~~~~~i~~~~~~~~~~~~~l~~~ 175 (525)
|. +|.+.+++|+ ++.+.+++.+++.++..+++++.|+++|| +|||+++..+.++.+++.+++.++++++.+++.
T Consensus 12 p~--~~~~~~~~~~---s~~~~~~~~~~~~~~~~~~~~~~g~l~d~-~g~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~ 85 (377)
T PRK11102 12 PA--LPVIAADFGV---SAGSVQMTLSAYILGFAIGQLFYGPMADS-FGRKPVILGGTLVFALAAVACALAQTIDQLIYM 85 (377)
T ss_pred cc--HHHHHHHhCC---CHHHHHHHHHHHHHHHHHHHHhhchHHhh-cCChHHHHHHHHHHHHHHHHHHHHccHHHHHHH
Confidence 55 8999999999 99999999999999999999999999999 999999999999999999999999999999999
Q ss_pred HHHHhhcccchhhhhheeeEeeecCcchhhHHhHHHHHHHHHHHHHHHHH-HhccCCchHHHHHHHHHHHHHHHhHhhee
Q 041759 176 RFFSGISRATIGTCTIVLLTEKVGTEWRGLVGILDSFFFTIGTLTLPAIA-YTNRSSSWTIIYLWTSIPTLVYSGLLYIF 254 (525)
Q Consensus 176 r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~l~~~l~-~~~~~~~wr~~f~~~~~~~~~~~~~~~~~ 254 (525)
|++.|++.+...+...+++.|++|+++|++++++.+.+..+|..++|.++ .+.+..+||+.|++.+++.++..++..++
T Consensus 86 ~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~ 165 (377)
T PRK11102 86 RFLHGLAAAAASVVINALMRDMFPKEEFSRMMSFVTLVMTIAPLLAPIIGGWLLVWFSWHAIFWVLALAAILAAALVFFF 165 (377)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcChHHHHHHHHHHHHHHHHHHHHh
Confidence 99999999999999999999999999999999999999999999999884 45566799999999888887776556666
Q ss_pred ecCCchHhhhcCCHHHHHHHHHhhCCCcCCccchhhhhhhccCCCCcccccccccchhhhhhhhcchhHHHHHHHHHHHH
Q 041759 255 VSESPRWLFMQGRQEEAVEVIKSLSPIKDSNQLSLSLVSAVSFGHEPAASSKESSFLSSIRELFVRRWALERTLALMVPG 334 (525)
Q Consensus 255 lpesp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~ 334 (525)
+||+++. ++ +++.+.+ +...+++++++++..+...+...+..
T Consensus 166 ~~~~~~~----~~--------------~~~~~~~--------------------~~~~~~~~~~~~~~~~~~~~~~~~~~ 207 (377)
T PRK11102 166 IPETLPK----ER--------------RQPFHLR--------------------TTIRNFASLFRHKRVLGYMLASGFSF 207 (377)
T ss_pred CCccCcc----cc--------------cCCCChH--------------------HHHHHHHHHHcChHHHHHHHHHHHHH
Confidence 7775320 00 0000000 00134566778877555444433333
Q ss_pred HHHHHHHhhhh-hcccccCChhHHHHHHHHHhcccccccCchhHHHHHHHHHhhcChhHHHHHHHHHHHHHHHHHHhccc
Q 041759 335 FGIGVVYYGMT-LGIENLGFDIYLGVVFNALLEIPNLASTIPSFFLTFFLIQKWNRKSSLLVLFIISGICSIMAVVANDI 413 (525)
Q Consensus 335 ~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~d~~g~~~~~~~~~~~~~~~~~~~~~~~~~ 413 (525)
..........+ ++.+..|.+..+.+.......+ +.+++.++.+++.||+|+|+.+..+..+..+..+.+......
T Consensus 208 ~~~~~~~~~~~~~~~~~~g~s~~~~g~~~~~~~~----~~~~~~~~~g~l~~r~g~~~~~~~~~~~~~~~~~~~~~~~~~ 283 (377)
T PRK11102 208 AGMFSFLTAGPFVYIELNGVSPQNFGYYFALNIV----FLFVMTIINSRFVRRVGALNMLRFGLWIQFIMGIWLVVSALL 283 (377)
T ss_pred HHHHHHHHcCHHHHHHHhCCCHHHHHHHHHHHHH----HHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 33322222223 4445578888887777776666 777899999999999999999888876654443333222111
Q ss_pred cccchhHHHHHHHHHHHHHHHHHHHHHhhhccccCcchhhhhhHHHHHHH-HHHHHHHHHHHhhccCchhHHHHHHHHHH
Q 041759 414 SNAGKRMRIGLELASLFSAYIAYTVIFIYAIELFPTCVRNSATSIMRLAI-IFAAIFSSVLVAAGSNNEFVSYGVFGLVI 492 (525)
Q Consensus 414 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~r~~~~~~~~~~~-~~g~~~~p~i~~~~~~~~~~~~~~~~~~~ 492 (525)
+ .+.....+...+...+.+...+.......|..| +.++++.++.+... .+|..+++++.+.........+...+++.
T Consensus 284 ~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~g~~~~~~~~~~~~~g~~~g~~~~~~~~~~~~~~~~~~~~~~ 361 (377)
T PRK11102 284 D-LGFWALVVGVAAFVGCVSMISSNAMAVILDEFP-HMAGTASSLAGTLRFGIGAIVGALLSLAPFTSAWPMVWSMAFCS 361 (377)
T ss_pred h-hhHHHHHHHHHHHHHHHHHhhHHHHHHHhcccc-ccchHHHHHHHHHHHHHHHHHHHHHHhccCCChHHHHHHHHHHH
Confidence 0 012222233333333344444455566777777 67899999887764 57777888776643333333333334444
Q ss_pred HHHHHHHHhc
Q 041759 493 ICCGFFVICL 502 (525)
Q Consensus 493 ~~~~~~~~~~ 502 (525)
+++.++.++.
T Consensus 362 ~~~~~~~~~~ 371 (377)
T PRK11102 362 ILSILFYLYA 371 (377)
T ss_pred HHHHHHHHHh
Confidence 4443333333
No 55
>PRK11043 putative transporter; Provisional
Probab=99.97 E-value=6e-29 Score=246.43 Aligned_cols=324 Identities=15% Similarity=0.146 Sum_probs=241.1
Q ss_pred ccceeeccccccchhhhhhhHHHHHHHHHHHhHHhhHhcccccCCchHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHH
Q 041759 100 ALTIISEWGLECSSAFIKGLPAASHFTGCLLGIVFLATLADSSLGRKNLLFLSCLTMSVATSLTIFSNNLWIYSLLRFFS 179 (525)
Q Consensus 100 ~~~i~~~~~~~~~s~~~~g~~~s~~~lg~~~~~~~~G~l~dr~~Grk~~~~~~~~~~~i~~~~~~~~~~~~~l~~~r~l~ 179 (525)
+|.+++++|+ ++.+.+++.+++.++..++++++|+++|| +|||+++..+.++.+++.+++.++++++.+++.|+++
T Consensus 29 ~~~i~~~~~~---s~~~~g~~~s~~~~~~~~~~~~~g~l~dr-~g~r~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~ 104 (401)
T PRK11043 29 FKAIQADLQT---SASAVSASLSLFLAGFALGQLLWGPLSDR-YGRKPVLLAGLSLFALGSLGMLWVESAAQLLVLRFVQ 104 (401)
T ss_pred HHHHHHHHCC---CHHHHHHHHHHHHHHHHHHHHhhhhHHhh-cCCcHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHH
Confidence 7889999999 99999999999999999999999999999 9999999999999999999999999999999999999
Q ss_pred hhcccchhhhhheeeEeeecCcchhhHHhHHHHHHHHHHHHHHHH-HHhccCCchHHHHHHHHHHHHHHHhHhheeecCC
Q 041759 180 GISRATIGTCTIVLLTEKVGTEWRGLVGILDSFFFTIGTLTLPAI-AYTNRSSSWTIIYLWTSIPTLVYSGLLYIFVSES 258 (525)
Q Consensus 180 G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~l~~~l-~~~~~~~~wr~~f~~~~~~~~~~~~~~~~~lpes 258 (525)
|++.+...+...+++.|+++++++++..+.......+|..++|.+ +.+.+..+||+.|++.+++.++.. +..++++|+
T Consensus 105 G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~i~~~l~~~~g~~~~~~~~~~~~~~~~-~~~~~~~~~ 183 (401)
T PRK11043 105 AVGVCSAAVIWQALVIDRYPAQKANRVFATIMPLVALSPALAPLLGAWLLNHFGWQAIFATLFAITLLLI-LPTLRLKPS 183 (401)
T ss_pred HhhhHHHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCChHHHHHHHHHHHHHHH-HHHHHcCCC
Confidence 999988888888889999999999999999988899999999988 555567899999999888887776 334445543
Q ss_pred chHhhhcCCHHHHHHHHHhhCCCcCCccchhhhhhhccCCCCcccccccccchhhhhhhhcchhHHHHHHHHHHHHHHHH
Q 041759 259 PRWLFMQGRQEEAVEVIKSLSPIKDSNQLSLSLVSAVSFGHEPAASSKESSFLSSIRELFVRRWALERTLALMVPGFGIG 338 (525)
Q Consensus 259 p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~ 338 (525)
++ +++.++ + ..++++++++|.++...+..........
T Consensus 184 ~~----~~~~~~----------------------------------~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 220 (401)
T PRK11043 184 KK----ARKQSQ----------------------------------D-----ALTFKQLLKSKTYLGNVLIFAACSAAFF 220 (401)
T ss_pred CC----ccccch----------------------------------H-----HHHHHHHHcChhHHHHHHHHHHHHHHHH
Confidence 21 000000 0 0356677777776554443333332222
Q ss_pred HHHhhhhhcccccCChhHHHHHHHHHhcccccccCchhHHHHHHHHHhhcChhHHHHHHHHHHHHHHHHHHhccccccch
Q 041759 339 VVYYGMTLGIENLGFDIYLGVVFNALLEIPNLASTIPSFFLTFFLIQKWNRKSSLLVLFIISGICSIMAVVANDISNAGK 418 (525)
Q Consensus 339 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~d~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 418 (525)
......|.+.++.|.+....+.......+ +.+++.++.+++.||+++|+..........++.+.+.........++
T Consensus 221 ~~~~~~p~~~~~~g~s~~~~g~~~~~~~~----~~~~g~~~~~~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 296 (401)
T PRK11043 221 AWLTGSPFILEQMGYSPADIGLSYVPQTI----AFLVGGYGCRAALQKWGGEQLLPWLLVLFAVSVIAIWLASLLSHPSL 296 (401)
T ss_pred HHHHHhHHHHHHcCCCHHHHHHHHHHHHH----HHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHHhccCcH
Confidence 23334566667788887777665544444 55688889999999999888766555554444333222111000123
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHhhhccccCcchhhhhhHHHHHHHHHHHHHHHHHHhh
Q 041759 419 RMRIGLELASLFSAYIAYTVIFIYAIELFPTCVRNSATSIMRLAIIFAAIFSSVLVAA 476 (525)
Q Consensus 419 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~r~~~~~~~~~~~~~g~~~~p~i~~~ 476 (525)
....+...+.+++.+..++.......+..|+ .++++.|+.+.....++..++.+.+.
T Consensus 297 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~g~~~g~~~~~~~~~~~~~~~~~g~ 353 (401)
T PRK11043 297 VPLLIPFCVMAAANGAIYPIVVAQALRPFPQ-ATGKAAALQNTLQLGLCFLASLLVSA 353 (401)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhhhCcc-cChHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3344455566777778888887777777774 68999999999988888888888774
No 56
>TIGR00899 2A0120 sugar efflux transporter. This family of proteins is an efflux system for lactose, glucose, aromatic glucosides and galactosides, cellobiose, maltose, a-methyl glucoside and other sugar compounds. They are found in both gram-negative and gram-postitive bacteria.
Probab=99.97 E-value=1.7e-29 Score=248.40 Aligned_cols=347 Identities=16% Similarity=0.142 Sum_probs=250.0
Q ss_pred ccc-eeeccccccchhhhhhhHHHHHHHHHHHhHHhhHhcccccCCchHHHHH-HHHHHHHHHHHHHhhhhHHHHHHHHH
Q 041759 100 ALT-IISEWGLECSSAFIKGLPAASHFTGCLLGIVFLATLADSSLGRKNLLFL-SCLTMSVATSLTIFSNNLWIYSLLRF 177 (525)
Q Consensus 100 ~~~-i~~~~~~~~~s~~~~g~~~s~~~lg~~~~~~~~G~l~dr~~Grk~~~~~-~~~~~~i~~~~~~~~~~~~~l~~~r~ 177 (525)
+|. +++++|. +..+.|++.+++.++..+.+++.|+++|| +||||.++. +.++.+++.++.+++++++.+++.|+
T Consensus 20 l~~~l~~~~g~---s~~~~g~~~~~~~~~~~~~~~~~g~l~Dr-~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~ 95 (375)
T TIGR00899 20 LSLFLSEEVRA---RPAMIGLFYTGSAIVGIAVSQLLATRSDY-QGDRKGLILFCCLLAALACLLFAWNRNYFLLLVLGV 95 (375)
T ss_pred HHHHHHcccCC---CHHHHHHHHHHHHHHHHHHHHHHHHHHhc-cCCchHHHHHHHHHHHHHHHHHHhcchHHHHHHHHH
Confidence 554 6789999 99999999999999999999999999999 999887654 56666777888899999999999999
Q ss_pred HHhhcccchhhhhheeeEeeecCcchhhH--HhHHHHHHHHHHHHHHHH-HHhccCCchHHHHHHHHHHHHHHHhHhhee
Q 041759 178 FSGISRATIGTCTIVLLTEKVGTEWRGLV--GILDSFFFTIGTLTLPAI-AYTNRSSSWTIIYLWTSIPTLVYSGLLYIF 254 (525)
Q Consensus 178 l~G~~~~~~~~~~~~~i~~~~~~~~r~~~--~~~~~~~~~~G~~l~~~l-~~~~~~~~wr~~f~~~~~~~~~~~~~~~~~ 254 (525)
+.|.+.+...|...+++.|+.|+++|++. .+....+.++|.+++|.+ +.+.+..+||+.|++.++..++..++.+++
T Consensus 96 ~~g~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~ig~~~~~~l~~~~~~~~~f~~~~~~~~~~~~~~~~~ 175 (375)
T TIGR00899 96 LLSSFASTANPQLFALAREHADRTGREAVMFSSVMRAQISLAWVIGPPLAFWLALGFGFTVMFLTAALAFVLCGVLVWLF 175 (375)
T ss_pred HHHhhhhhhHHHHHHHHHHHhhhcchhhHHHHHHHHHHHhHHHHHhhhHHHHHHHhcccHHHHHHHHHHHHHHHHHHHHh
Confidence 99988888888888888888887777654 577888889999999988 445567899999999998887776556666
Q ss_pred ecCCchHhhhcCCHHHHHHHHHhhCCCcCCccchhhhhhhccCCCCcccccccccchhhhhhhhcchhHHHHHHHHHHHH
Q 041759 255 VSESPRWLFMQGRQEEAVEVIKSLSPIKDSNQLSLSLVSAVSFGHEPAASSKESSFLSSIRELFVRRWALERTLALMVPG 334 (525)
Q Consensus 255 lpesp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~ 334 (525)
+||+|++. +.+ .+ + .+.++.+++++++......++.+
T Consensus 176 ~~~~~~~~----~~~------------~~----------------------~-----~~~~~~~~~~~~~~~~~~~~~~~ 212 (375)
T TIGR00899 176 LPSYPRGA----PGA------------LT----------------------R-----LEVRGLLASRDTRLLFVACTLMW 212 (375)
T ss_pred CCCcccCc----ccc------------cC----------------------c-----chhhhhhcCcchHHHHHHHHHHH
Confidence 88865310 000 00 0 12223455555444444343333
Q ss_pred HHHHHHHhhhhhcc-cccCChhHHHHHHHHHhcccccccCchhHHHHHHHHHhhcChhHHHHHHHHHHHHHHHHHHhccc
Q 041759 335 FGIGVVYYGMTLGI-ENLGFDIYLGVVFNALLEIPNLASTIPSFFLTFFLIQKWNRKSSLLVLFIISGICSIMAVVANDI 413 (525)
Q Consensus 335 ~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~d~~g~~~~~~~~~~~~~~~~~~~~~~~~~ 413 (525)
..........|.+. ++.|.+....+...+.... ..+++.++.+++.||++||+.+.++..+..+....+....+
T Consensus 213 ~~~~~~~~~~~~~~~~~~g~~~~~~g~~~~~~~~----~~~~~~~~~g~l~~r~g~~~~~~~~~~~~~~~~~~~~~~~~- 287 (375)
T TIGR00899 213 GCNILYIINMPLLIIHELGLPDKLAGLMMGTAAG----LEIPFMLLAGYLIKRFGKRRLMLLAALAGVAFYTGLAADNS- 287 (375)
T ss_pred HHHHHHHhhhHHHHHHHcCCCHHHHHHHHHHHHH----HHHHHHHhHHHHHHHhcchhHHHHHHHHHHHHHHHHHHHHH-
Confidence 33333333344444 5578777776666555444 44577889999999999999888777665555444333222
Q ss_pred cccchhHHHHHHHHHHHHHHHHHHHHHhhhccccCcchhhhhhHHHHHHHHHHHHHHHHHHhh--ccCchhHHHHHHHHH
Q 041759 414 SNAGKRMRIGLELASLFSAYIAYTVIFIYAIELFPTCVRNSATSIMRLAIIFAAIFSSVLVAA--GSNNEFVSYGVFGLV 491 (525)
Q Consensus 414 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~r~~~~~~~~~~~~~g~~~~p~i~~~--~~~~~~~~~~~~~~~ 491 (525)
.+...+..++.+++.+...+....+..|..|++ ++++.++.+....+|..++|.+.|. +..++...+.+.+++
T Consensus 288 ----~~~~~~~~~~~g~~~g~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~g~~~g~~~~g~~~~~~g~~~~~~~~~~~ 362 (375)
T TIGR00899 288 ----LWALLMLQLLNAIFIGILAGIGMLYFQDLMPGR-AGAATTLYTNTGRVGWIIAGSVGGILAERWSYHAVYWFAIVM 362 (375)
T ss_pred ----HHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcch-hhHHHHHHHHHHHHHHHHHHHHHHHHHHhccchhHHHHHHHH
Confidence 234445556667777777788888888988865 5799999999999999999999985 334566777777777
Q ss_pred HHHHHHHHHhcc
Q 041759 492 IICCGFFVICLP 503 (525)
Q Consensus 492 ~~~~~~~~~~~~ 503 (525)
.+++.++..+++
T Consensus 363 ~~~~~~~~~~~~ 374 (375)
T TIGR00899 363 LIVALFCLLLIK 374 (375)
T ss_pred HHHHHHHHheec
Confidence 777666665543
No 57
>PRK11195 lysophospholipid transporter LplT; Provisional
Probab=99.97 E-value=1.4e-29 Score=249.15 Aligned_cols=346 Identities=11% Similarity=0.014 Sum_probs=247.2
Q ss_pred ccceeeccccccchhhhhhhHHHHHHHHHHHhHHhhHhcccccCCchHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHH
Q 041759 100 ALTIISEWGLECSSAFIKGLPAASHFTGCLLGIVFLATLADSSLGRKNLLFLSCLTMSVATSLTIFSNNLWIYSLLRFFS 179 (525)
Q Consensus 100 ~~~i~~~~~~~~~s~~~~g~~~s~~~lg~~~~~~~~G~l~dr~~Grk~~~~~~~~~~~i~~~~~~~~~~~~~l~~~r~l~ 179 (525)
.+.+.+|++. +..+.+++.+.+.+++.++++++|+++|| +|||++++++.+++++++++++++.+. ++.|+++
T Consensus 26 ~~~~~~~~~~---s~~~~~~~~~~~~l~~~l~~~~~G~laDr-~grr~vl~~~~~~~~~~~~~~~~~~~~---~~~r~l~ 98 (393)
T PRK11195 26 AIALLKELHY---PDWSQPLLQMFFVLAYIVLAPFVGAFADS-FPKGRVMFIANGIKLLGCLLMLFGIHP---LLAYGLV 98 (393)
T ss_pred HHHHHHHcCC---cHHHHHHHHHHHHHHHHHHHhhhhHhhhc-cCCchhhHHHHHHHHHHHHHHHHHHHH---HHHHHHH
Confidence 5566789998 89999999999999999999999999999 999999999999999999888877664 7889999
Q ss_pred hhcccchhhhhheeeEeeecCcchhhHHhHHHHHHHHHHHHHHHHHHhccCCchHHHHHHHHHHHHHHHhHhheeecCCc
Q 041759 180 GISRATIGTCTIVLLTEKVGTEWRGLVGILDSFFFTIGTLTLPAIAYTNRSSSWTIIYLWTSIPTLVYSGLLYIFVSESP 259 (525)
Q Consensus 180 G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~l~~~l~~~~~~~~wr~~f~~~~~~~~~~~~~~~~~lpesp 259 (525)
|++.+...|...+++.|++|+++|+++.++.+....+|.++||.++..+.+..|+..+.+.+...++.. +..+.+||+|
T Consensus 99 G~~~a~~~pa~~a~i~~~~~~~~~~~a~~~~~~~~~~~~~~Gp~lgG~l~~~~~~~~~~i~~~~~~~~~-~~~~~l~~~~ 177 (393)
T PRK11195 99 GIGAAAYSPAKYGILTELLPGEKLVKANGWMEGSTIAAILLGTVLGGALADPHAEAALAVCALIYLLAA-LFNLFIPRLG 177 (393)
T ss_pred HHHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHhcCCCCc
Confidence 999999999999999999999999999999999999999999999666544568888777766655444 5566788865
Q ss_pred hHhhhcCCHHHHHHHHHhhCCCcCCccchhhhhhhccCCCCcccccccccchhhhhhhhcchhHHHHHHHHHHHHHHHHH
Q 041759 260 RWLFMQGRQEEAVEVIKSLSPIKDSNQLSLSLVSAVSFGHEPAASSKESSFLSSIRELFVRRWALERTLALMVPGFGIGV 339 (525)
Q Consensus 260 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~ 339 (525)
... ++++++.....+.. ....+.++++|.++..++...+.+.....
T Consensus 178 ~~~--~~~~~~~~~~~~~~--------------------------------~~~~~~l~~~~~~~~~~~~~~~~~~~~~~ 223 (393)
T PRK11195 178 ARR--PGQSWNPIALLRDF--------------------------------FHACRVLWRDKLGRFSLAGTTLFWGAGAT 223 (393)
T ss_pred ccc--cccCCCHHHHHHHH--------------------------------HHHHHHHHhCchhHHHHHHHHHHHHHHHH
Confidence 311 00000000000000 02345677777766555444444444444
Q ss_pred HHhhhhhccc-ccCChhHHHHHHHHHhcccccccCchhHHHHHHHHHhhcChhHHHHHHHHHHHHHHHHHHhccccccch
Q 041759 340 VYYGMTLGIE-NLGFDIYLGVVFNALLEIPNLASTIPSFFLTFFLIQKWNRKSSLLVLFIISGICSIMAVVANDISNAGK 418 (525)
Q Consensus 340 ~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~d~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 418 (525)
..+..+.+.+ .+|.++.+.+.......+ +.+++.++.+++.||.++++.+..+.. .++..+.+.... . +
T Consensus 224 ~~~~~~~~~~~~lg~s~~~~G~~~~~~~~----g~i~g~~~~~~l~~~~~~~~~~~~g~~-~~~~~~~~~~~~-~----~ 293 (393)
T PRK11195 224 LRFLVLAWAPVALGITLNQPAYLQAVVAI----GIAVGAGAAARLVTLETVLRVLPAGIL-MGLVVLLMALQH-S----L 293 (393)
T ss_pred HHHHHHHHHHHHcCCChhHHHHHHHHHHH----HHHHHHHHHHHHhcCCcccchHHHHHH-HHHHHHHHHHHh-H----H
Confidence 4444454444 368888888888777777 778999999999999888887777643 333333333222 1 3
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHhhhccccCcch-hhhhhHHHHHHHHHHHHHHHHHHhh-ccCchhHHHHHHHHHHHHHH
Q 041759 419 RMRIGLELASLFSAYIAYTVIFIYAIELFPTCV-RNSATSIMRLAIIFAAIFSSVLVAA-GSNNEFVSYGVFGLVIICCG 496 (525)
Q Consensus 419 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~-r~~~~~~~~~~~~~g~~~~p~i~~~-~~~~~~~~~~~~~~~~~~~~ 496 (525)
+...+..++.+++.+...+...+...+..|++. +|++.++.+....++..++..+.+. ...+....+.+.+...+++.
T Consensus 294 ~~~~~~~~~~G~~~g~~~~~~~~~~q~~~~~~~~~g~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 373 (393)
T PRK11195 294 LPAYPLLILIGALGGFFVVPMNALLQHRGHVLVGAGHSIAVQNFNENLAMLLMLGLYSLLVKLGVPVVAVIVGFGLLVAL 373 (393)
T ss_pred HHHHHHHHHHHHhhhhhhhhHHHHHHhhCcccccchhHHHHHhHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHH
Confidence 344455656677777766667777778766654 7999999999999999988888774 23344445554444444443
Q ss_pred H
Q 041759 497 F 497 (525)
Q Consensus 497 ~ 497 (525)
.
T Consensus 374 ~ 374 (393)
T PRK11195 374 A 374 (393)
T ss_pred H
Confidence 3
No 58
>TIGR00897 2A0118 polyol permease family. This family of proteins includes the ribitol and D-arabinitol transporters from Klebsiella pneumoniae and the alpha-ketoglutarate permease from Bacillus subtilis.
Probab=99.97 E-value=7e-29 Score=245.49 Aligned_cols=356 Identities=10% Similarity=0.015 Sum_probs=246.1
Q ss_pred ccceeeccccccchhhhhhhHHHHHHHHHHHhHHhhHhcccccCCchHHHHHHHHHHHHHHHHHH---h-hhhHHHHHHH
Q 041759 100 ALTIISEWGLECSSAFIKGLPAASHFTGCLLGIVFLATLADSSLGRKNLLFLSCLTMSVATSLTI---F-SNNLWIYSLL 175 (525)
Q Consensus 100 ~~~i~~~~~~~~~s~~~~g~~~s~~~lg~~~~~~~~G~l~dr~~Grk~~~~~~~~~~~i~~~~~~---~-~~~~~~l~~~ 175 (525)
.+.+.+|+|+ +..+.|++.+.+.++..+++++.|+++|| +|||+++..+.++.+++++++. + .++++.+++.
T Consensus 36 ~~~~~~~~g~---s~~~~g~~~~~~~~~~~i~~~~~g~l~dr-~g~k~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 111 (402)
T TIGR00897 36 LSPFLKALGL---SPQQSASAFTLYGIAAAISAWISGVVAEI-IGPLKTMMIGLLLWCVGHAAFIVFGLGHANYPLILLF 111 (402)
T ss_pred HHHHHHHhCC---CHHHhHHHHHHHHHHHHHHHHHHHHHHHH-cCcHHHHHHHHHHHHHHHHHHHHHhccCccHHHHHHH
Confidence 4556688999 99999999999999999999999999999 9999999999999998877653 3 3578899999
Q ss_pred HHHHhhcccchhhhhheeeEeeecCcchhhHHhHHHHHHHHHH-HHHHHHH-HhccCCchHHHHHHHHHHHHHHHhHhhe
Q 041759 176 RFFSGISRATIGTCTIVLLTEKVGTEWRGLVGILDSFFFTIGT-LTLPAIA-YTNRSSSWTIIYLWTSIPTLVYSGLLYI 253 (525)
Q Consensus 176 r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~-~l~~~l~-~~~~~~~wr~~f~~~~~~~~~~~~~~~~ 253 (525)
|++.|++.+...+...+++.+++|+++|++++++.+.+.++|. +++|.++ .+.+..||+..++......++..++..+
T Consensus 112 ~~i~G~g~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~~g~~~~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~ 191 (402)
T TIGR00897 112 YGIRGLGYPLFAYSFLVWVVYNTKQDNLSSAVGWFWAVYSIGIGVFGSYYSSYAIPAFGEMNTLWSALAFVLTGGVIALF 191 (402)
T ss_pred HHHHHcchHHHHhHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccccchHHHHHHHHHHHHHHHHHHHh
Confidence 9999999988888888888899999999999999999999997 5788884 5566678665555444333333323333
Q ss_pred eecCCchHhhhcCCHHHHHHHHHhhCCCcCCccchhhhhhhccCCCCcccccccccchhhhhhhhcchhHHHHHHHHHHH
Q 041759 254 FVSESPRWLFMQGRQEEAVEVIKSLSPIKDSNQLSLSLVSAVSFGHEPAASSKESSFLSSIRELFVRRWALERTLALMVP 333 (525)
Q Consensus 254 ~lpesp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~ 333 (525)
+.+|.++ +++.++ + + +.+ +....+++++++|.++...+..++.
T Consensus 192 ~~~~~~~----~~~~~~---------~--~----------------~~~------~~~~~~~~~~~~~~~~~~~~~~~~~ 234 (402)
T TIGR00897 192 SNKDIFT----PQHMQT---------R--E----------------KFS------ELGKAATILFTNPNVLLGGMVRIIN 234 (402)
T ss_pred ccCCCCC----cccccC---------C--c----------------chh------hHHHHHHHHHcChhHHHHHHHHHHH
Confidence 3444211 000000 0 0 000 0012456788888876655554444
Q ss_pred HHHHHHHHhhhhhcccccCChhHHHHHHHHHhcccccccCchhHHHHHHHHHhhcChhHHH-HHHHHHHHHHHHHHHhcc
Q 041759 334 GFGIGVVYYGMTLGIENLGFDIYLGVVFNALLEIPNLASTIPSFFLTFFLIQKWNRKSSLL-VLFIISGICSIMAVVAND 412 (525)
Q Consensus 334 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~d~~g~~~~~~-~~~~~~~~~~~~~~~~~~ 412 (525)
...........|.+.++.|.+........+...+ +.+++.++.|++.||++||+.+. .+.+...+..+.+...+.
T Consensus 235 ~~~~~~~~~~~p~~~~~~g~s~~~~~~~~~~~~~----~~~ig~~~~g~l~dr~~~~~~~~~~~~l~~~~~~~~l~~~~~ 310 (402)
T TIGR00897 235 TIGLFGFAVFLPMFVAELGFSTSEWLQIWGTFFF----TNIVFNVIFGIVGDKLGWMNTVRWFGGVGCGIFTLALYYIPQ 310 (402)
T ss_pred HHHHHHHHHHHHHHHHHcCCChhHHHHHHHHHHH----HHHHHHHHHHHHHHhhcchhHHHHHHHHHHHHHHHHHHHHHH
Confidence 4444444445677778888888777766666655 77799999999999999887664 333333333333332221
Q ss_pred ccccchhHHHHHHHHHHHHHHHHHHHHHhhhccccCcchhhhhhHHHHHHHHHHHHHHHHHHhh--ccCchhHHHHHHHH
Q 041759 413 ISNAGKRMRIGLELASLFSAYIAYTVIFIYAIELFPTCVRNSATSIMRLAIIFAAIFSSVLVAA--GSNNEFVSYGVFGL 490 (525)
Q Consensus 413 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~r~~~~~~~~~~~~~g~~~~p~i~~~--~~~~~~~~~~~~~~ 490 (525)
....+.....+..++.+++.+...+. .....|..| ++|+++.|+.+....+|+.++|.+.+. +..+....+++.++
T Consensus 311 ~~~~~~~~~~~~~~~~G~~~~~~~~~-~~~~~~~~~-~~~g~~~g~~~~~~~lg~~~gp~i~g~l~~~~g~~~~~~~~a~ 388 (402)
T TIGR00897 311 HFGHSFAVALIIAIALGIFLAGYVPL-AAVFPTLAP-KHKGAAMSVLNLSAGLSAFLAPAIAVLFIGFFGAIGVVWIFAA 388 (402)
T ss_pred ccCCcHHHHHHHHHHHHHHHHHHHHH-HHHHHhhCc-chhHHHHHHHHHHHHHHHHHHHHHHHHHHhhcchHHHHHHHHH
Confidence 10011233445555666665554443 445566655 579999999999999999999999984 33466777787777
Q ss_pred HHHHHHHHHHhc
Q 041759 491 VIICCGFFVICL 502 (525)
Q Consensus 491 ~~~~~~~~~~~~ 502 (525)
+.+++.++..++
T Consensus 389 ~~~i~~~~~~~~ 400 (402)
T TIGR00897 389 LYVVSAFLTAFI 400 (402)
T ss_pred HHHHHHHHHHHh
Confidence 777766665554
No 59
>PRK09874 drug efflux system protein MdtG; Provisional
Probab=99.97 E-value=2e-29 Score=250.82 Aligned_cols=347 Identities=14% Similarity=0.071 Sum_probs=250.1
Q ss_pred ccceeeccccccchhhh-----hhhHHHHHHHHHHHhHHhhHhcccccCCchHHHHHHHHHHHHHHHHHHhhhhHHHHHH
Q 041759 100 ALTIISEWGLECSSAFI-----KGLPAASHFTGCLLGIVFLATLADSSLGRKNLLFLSCLTMSVATSLTIFSNNLWIYSL 174 (525)
Q Consensus 100 ~~~i~~~~~~~~~s~~~-----~g~~~s~~~lg~~~~~~~~G~l~dr~~Grk~~~~~~~~~~~i~~~~~~~~~~~~~l~~ 174 (525)
+|.+.+++|+ +..+ .|++.+++.++..+++++.|+++|| +|||+++..+.++.+++.++..+.++++.+++
T Consensus 37 l~~~~~~~g~---~~~~~~~~~~g~~~~~~~~~~~~~~~~~g~l~dr-~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 112 (408)
T PRK09874 37 LPLYVEQLGV---TGHSALNMWSGLVFSITFLFSAIASPFWGGLADR-KGRKIMLLRSALGMGIVMVLMGLAQNIWQFLI 112 (408)
T ss_pred HHHHHHHhCC---ccchhHHHHHHHHHHHHHHHHHHHHHHHHHHhhh-hCcHHHHHHHHHHHHHHHHHHHHHhhHHHHHH
Confidence 7888899988 5443 5899999999999999999999999 99999999999999999999999999999999
Q ss_pred HHHHHhhcccchhhhhheeeEeeecCcchhhHHhHHHHHHHHHHHHHHHHH-HhccCCchHHHHHHHHHHHHHHHhHhhe
Q 041759 175 LRFFSGISRATIGTCTIVLLTEKVGTEWRGLVGILDSFFFTIGTLTLPAIA-YTNRSSSWTIIYLWTSIPTLVYSGLLYI 253 (525)
Q Consensus 175 ~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~l~~~l~-~~~~~~~wr~~f~~~~~~~~~~~~~~~~ 253 (525)
.|++.|++.+ ..+....++.|++|+++|+++.++...+..+|.+++|.++ .+.+..+||+.|++.+++.++..+...+
T Consensus 113 ~~~~~g~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~ 191 (408)
T PRK09874 113 LRALLGLLGG-FVPNANALIATQVPRNKSGWALGTLSTGGVSGALLGPLAGGLLADSYGLRPVFFITASVLFLCFLVTLF 191 (408)
T ss_pred HHHHHHHhhh-hHHhHHHHHHHhcCHhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999865 4677778888999999999999999999999999999884 4556679999999998888777655566
Q ss_pred eecCCchHhhhcCCHHHHHHHHHhhCCCcCCccchhhhhhhccCCCCcccccccccchhhhhhhhcchhHHHHHHH-HHH
Q 041759 254 FVSESPRWLFMQGRQEEAVEVIKSLSPIKDSNQLSLSLVSAVSFGHEPAASSKESSFLSSIRELFVRRWALERTLA-LMV 332 (525)
Q Consensus 254 ~lpesp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~-~~~ 332 (525)
++||+++. .++.++ .+ .....+.+++++.+..... .+.
T Consensus 192 ~~~~~~~~---~~~~~~-~~-------------------------------------~~~~~~~~~~~~~~~~~~~~~~~ 230 (408)
T PRK09874 192 CIRENFQP---VSKKEM-LH-------------------------------------MREVVTSLKNPKLVLSLFVTTLI 230 (408)
T ss_pred HhccCccc---ccchhh-hH-------------------------------------HHHHHHhCcCCchHHHHHHHHHH
Confidence 66664310 000000 00 0122234455554332222 222
Q ss_pred HHHHHHHHHhhhhhcccccCChhH----HHHHHHHHhcccccccCchhHHHHHHHHHhhcChhHHHHHHHHHHHHHHHHH
Q 041759 333 PGFGIGVVYYGMTLGIENLGFDIY----LGVVFNALLEIPNLASTIPSFFLTFFLIQKWNRKSSLLVLFIISGICSIMAV 408 (525)
Q Consensus 333 ~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~l~d~~g~~~~~~~~~~~~~~~~~~~~ 408 (525)
............+.+..+.+.+.. ..+.+.....+ +.+++.+..+++.||++||+.+..+..+..+..+...
T Consensus 231 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~l----~~~~~~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~ 306 (408)
T PRK09874 231 IQVATGSIAPILTLYVRELAGNVSNIAFISGMIASVPGV----AALLSAPRLGKLGDRIGPEKILITALIFSVLLLIPMS 306 (408)
T ss_pred HHHHHHHHHHHHHHHHHHHhccchHHHHHHHHHHHHHHH----HHHHHHHHHHHHHhccccchhHHHHHHHHHHHHHHHH
Confidence 222222222223333333222221 12223333333 5557888899999999999999888877776665554
Q ss_pred HhccccccchhHHHHHHHHHHHHHHHHHHHHHhhhccccCcchhhhhhHHHHHHHHHHHHHHHHHHhh--ccCchhHHHH
Q 041759 409 VANDISNAGKRMRIGLELASLFSAYIAYTVIFIYAIELFPTCVRNSATSIMRLAIIFAAIFSSVLVAA--GSNNEFVSYG 486 (525)
Q Consensus 409 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~r~~~~~~~~~~~~~g~~~~p~i~~~--~~~~~~~~~~ 486 (525)
..... ....+..++.+++.+...+...+...+..|++.+++.+++.+....+|..++|.+.|. ...++...|.
T Consensus 307 ~~~~~-----~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~g~~~gp~~~G~l~~~~g~~~~f~ 381 (408)
T PRK09874 307 FVQTP-----LQLGILRFLLGAADGALLPAVQTLLVYNSSNQIAGRIFSYNQSFRDIGNVTGPLMGAAISANYGFRAVFL 381 (408)
T ss_pred HhccH-----HHHHHHHHHHHhhhHhhHHHHHHHHHHhCCcccceeeehHHHHHHHHHHHhhHHHHHHHHhhcchhHHHH
Confidence 44322 3455566677788888888888888888999999999999999999999999999985 3346777888
Q ss_pred HHHHHHHHHHHHHHh
Q 041759 487 VFGLVIICCGFFVIC 501 (525)
Q Consensus 487 ~~~~~~~~~~~~~~~ 501 (525)
+.+++.+++.+..++
T Consensus 382 ~~~~~~l~~~~~~~~ 396 (408)
T PRK09874 382 VTAGVVLFNAVYSWN 396 (408)
T ss_pred HHHHHHHHHHHHHHH
Confidence 887777776665544
No 60
>PRK10133 L-fucose transporter; Provisional
Probab=99.97 E-value=7.7e-29 Score=246.44 Aligned_cols=343 Identities=13% Similarity=0.069 Sum_probs=252.1
Q ss_pred HHHHHHHHHHHHHHHHHhhhcccCccccccCCCCCCCCCCCCCCCCCCceecCCCCccccceeeccccccchhhhhhhHH
Q 041759 42 AILVSLASLFDSQQSFISVYTEAEPTWHCLNNTTCSSASNICMFPKSSWAWDGNPTTTALTIISEWGLECSSAFIKGLPA 121 (525)
Q Consensus 42 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~c~~~~~~~~~~~~p~~~~~~i~~~~~~~~~s~~~~g~~~ 121 (525)
+.++++.++..+++....... .|.+++++|+ ++.+.|++.
T Consensus 28 ~~~~~~~~~~~~~~~~~~~~~-------------------------------------~p~i~~~~~~---s~~~~gl~~ 67 (438)
T PRK10133 28 FALLCSLFFLWAVANNLNDIL-------------------------------------LPQFQQAFTL---TNFQAGLIQ 67 (438)
T ss_pred HHHHHHHHHHHHHHHHHHHHH-------------------------------------HHHHHHHhCC---CHHHHHHHH
Confidence 455666777888888888888 9999999999 999999999
Q ss_pred HHHHHHHHHhHHhhHhcccccCCchHHHHHHHHHHHHHHHHH---HhhhhHHHHHHHHHHHhhcccchhhhhheeeEeee
Q 041759 122 ASHFTGCLLGIVFLATLADSSLGRKNLLFLSCLTMSVATSLT---IFSNNLWIYSLLRFFSGISRATIGTCTIVLLTEKV 198 (525)
Q Consensus 122 s~~~lg~~~~~~~~G~l~dr~~Grk~~~~~~~~~~~i~~~~~---~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~ 198 (525)
+.+.+++.+++++.|+++|| +|||+++..+.++++++++++ .++++++.++++|+++|+|.|...+....++.|+.
T Consensus 68 ~~~~~g~~i~~~~~g~l~dr-~G~r~~l~~g~~~~~~~~~l~~~~~~a~~~~~ll~~r~l~G~g~g~~~~~~~~~v~~~~ 146 (438)
T PRK10133 68 SAFYFGYFIIPIPAGILMKK-LSYKAGIITGLFLYALGAALFWPAAEIMNYTLFLVGLFIIAAGLGCLETAANPFVTVLG 146 (438)
T ss_pred HHHHHHHHHHHHHHHHHHHH-hCcHHHHHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHhhHHHHHHHhC
Confidence 99999999999999999999 999999999999999999875 46789999999999999999999999999999987
Q ss_pred cCcchhhHHhHHHHHHHHHHHHHHHHHHhcc--C-------------------------CchHHHHHHHH-HHHHHHHhH
Q 041759 199 GTEWRGLVGILDSFFFTIGTLTLPAIAYTNR--S-------------------------SSWTIIYLWTS-IPTLVYSGL 250 (525)
Q Consensus 199 ~~~~r~~~~~~~~~~~~~G~~l~~~l~~~~~--~-------------------------~~wr~~f~~~~-~~~~~~~~~ 250 (525)
++++|.+.+++.+..+.+|..+++.++..+. . .+||++|+... +..++..++
T Consensus 147 ~~~~~~~~~s~~~~~~~~G~~~g~~~g~~l~~~~~~~~~~~~~~~l~~~~~~~w~~~~~~~w~~~f~~~~~v~~~~~~~~ 226 (438)
T PRK10133 147 PESSGHFRLNLAQTFNSFGAIIAVVFGQSLILSNVPHQSQDVLDKMTPEQLSAYKHSLVLSVQTPYMIIVAIVLLVALLI 226 (438)
T ss_pred ChhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcccchhhhhccChhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 7777777899999999999999998853211 0 25666665433 333333323
Q ss_pred hheeecCCchHhhhcCCHHHHHHHHHhhCCCcCCccchhhhhhhccCCCCcccccccccchhhhhhhhcchhHHHHHHHH
Q 041759 251 LYIFVSESPRWLFMQGRQEEAVEVIKSLSPIKDSNQLSLSLVSAVSFGHEPAASSKESSFLSSIRELFVRRWALERTLAL 330 (525)
Q Consensus 251 ~~~~lpesp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~ 330 (525)
....+||.+. + +.++ .+. .+.....++++++|.++...+..
T Consensus 227 ~~~~~p~~~~----~-~~~~-----------~~~-----------------------~~~~~~~~~ll~~~~~~~~~l~~ 267 (438)
T PRK10133 227 MLTKFPALQS----D-NHSD-----------AKQ-----------------------GSFSASLSRLARIRHWRWAVLAQ 267 (438)
T ss_pred HHhcCCCCCc----c-cccc-----------ccc-----------------------cchhhhHHHHHhCchHHHHHHHH
Confidence 2333444210 0 0000 000 00012456788888866555444
Q ss_pred HHHHHHHHHH-Hhhhhhccc-ccCChhHHHHHHHHHhcccccccCchhHHHHHHHHHhhcChhHHHHHHHHHHHHHHHHH
Q 041759 331 MVPGFGIGVV-YYGMTLGIE-NLGFDIYLGVVFNALLEIPNLASTIPSFFLTFFLIQKWNRKSSLLVLFIISGICSIMAV 408 (525)
Q Consensus 331 ~~~~~~~~~~-~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~d~~g~~~~~~~~~~~~~~~~~~~~ 408 (525)
++........ .|..+++.+ ..|.++...+.......+ +.++|+++.+++.||+++|+++..+..+..+.+++..
T Consensus 268 ~~~~~~~~~~~~~~~~~l~~~~~g~s~~~ag~~~~~~~~----~~~vG~~~~g~l~~r~g~~~~l~~~~~~~~~~~~~~~ 343 (438)
T PRK10133 268 FCYVGAQTACWSYLIRYAVEEIPGMTAGFAANYLTGTMV----CFFIGRFTGTWLISRFAPHKVLAAYALIAMALCLISA 343 (438)
T ss_pred HHHHHHHHHHHHHHHHHHhhhcCCCCHHHHHHHHHHHHH----HHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHH
Confidence 4433333322 233334343 578999888888887777 8889999999999999999998888777766665554
Q ss_pred HhccccccchhHHHHHHHHHHHHHHHHHHHHHhhhccccCcchhhhhhHHHHHHHHHHHHHHHHHHhh
Q 041759 409 VANDISNAGKRMRIGLELASLFSAYIAYTVIFIYAIELFPTCVRNSATSIMRLAIIFAAIFSSVLVAA 476 (525)
Q Consensus 409 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~r~~~~~~~~~~~~~g~~~~p~i~~~ 476 (525)
+.+.. .......+.+++.+..+|..++...+..|++ .+++.++... ..+|+.++|.+.|.
T Consensus 344 ~~~~~------~~~~~~~l~glg~~~i~P~~~s~a~~~~~~~-~~~as~l~~~-~~~g~~~~~~i~G~ 403 (438)
T PRK10133 344 FAGGH------VGLIALTLCSAFMSIQYPTIFSLGIKNLGQD-TKYGSSFIVM-TIIGGGIVTPVMGF 403 (438)
T ss_pred HcCCh------HHHHHHHHHHHHHHHHHHHHHHHHHcccchh-hccchhHHhH-HhccchHHHHHHHH
Confidence 43322 2345567788999999999999999998865 4677777753 55677788887774
No 61
>PRK12382 putative transporter; Provisional
Probab=99.97 E-value=9e-29 Score=244.39 Aligned_cols=338 Identities=13% Similarity=0.087 Sum_probs=237.9
Q ss_pred ccc-eeeccccccchhhhhhhHHHHHHHHHHHhHHhhHhcccccCCchHHHHHHHHHHHHHHHHHH--------hhhhHH
Q 041759 100 ALT-IISEWGLECSSAFIKGLPAASHFTGCLLGIVFLATLADSSLGRKNLLFLSCLTMSVATSLTI--------FSNNLW 170 (525)
Q Consensus 100 ~~~-i~~~~~~~~~s~~~~g~~~s~~~lg~~~~~~~~G~l~dr~~Grk~~~~~~~~~~~i~~~~~~--------~~~~~~ 170 (525)
+|. +++|+|+ +..+.|++.+++.+++.++++++|+++|| +|||++++.+.++..++.+... ..++++
T Consensus 38 l~~~l~~~lg~---s~~~~g~~~s~~~~~~~i~~~~~G~l~Dr-~g~r~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 113 (392)
T PRK12382 38 IPLFVHHDLGF---GNTMVGIAVGIQFLATVLTRGYAGRLADQ-YGAKRSALQGMLACGLAGLAYLLAAILPVSAPFKFA 113 (392)
T ss_pred hhHHHHHhcCC---cHHHHHHHHHHHHHHHHHHhhhhhHHHHh-hcchHHHHHHHHHHHHHHHHHHhhhccccchhHHHH
Confidence 554 6789999 99999999999999999999999999999 9999999999888777654322 136889
Q ss_pred HHHHHHHHHhhcccchhhhhheeeEeeecCcchhhHHhHHHHHHHHHHHHHHHHH-HhccCCchHHHHHHHHHHHHHHHh
Q 041759 171 IYSLLRFFSGISRATIGTCTIVLLTEKVGTEWRGLVGILDSFFFTIGTLTLPAIA-YTNRSSSWTIIYLWTSIPTLVYSG 249 (525)
Q Consensus 171 ~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~l~~~l~-~~~~~~~wr~~f~~~~~~~~~~~~ 249 (525)
.++++|+++|++.+...+...+++.|++|+++|++++++.+.+..+|.+++|+++ .+....|||+.+.+..+..++..
T Consensus 114 ~l~~~r~l~G~~~~~~~~~~~~~~~~~~~~~~r~~a~~~~~~~~~~g~~~g~~~~~~l~~~~g~~~~~~~~~~~~~~~~- 192 (392)
T PRK12382 114 LLVVGRLILGFGESQLLTGALTWGLGLVGPKHSGKVMSWNGMAMYGALAAGAPLGLLLHSHFGFAALALTTMVLPLLAW- 192 (392)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhhCCccccchhhhHHHHHHHHHHHHHHHHHHHHHhccChHHHHHHHHHHHHHHH-
Confidence 9999999999999988888888999999999999999999999999999999985 45566799998776655544433
Q ss_pred HhheeecCCchHhhhcCCHHHHHHHHHhhCCCcCCccchhhhhhhccCCCCcccccccccchhhhhhhhcchhHHHHHHH
Q 041759 250 LLYIFVSESPRWLFMQGRQEEAVEVIKSLSPIKDSNQLSLSLVSAVSFGHEPAASSKESSFLSSIRELFVRRWALERTLA 329 (525)
Q Consensus 250 ~~~~~lpesp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~ 329 (525)
......||.+. ++ + + + .+.++.++ ..+...+.
T Consensus 193 ~~~~~~~~~~~------~~-~---------~-~-----------------------------~~~~~~~~--~~~~~~~~ 224 (392)
T PRK12382 193 AFNGTVRKVPA------HA-G---------E-R-----------------------------PSLWSVVG--LIWKPGLG 224 (392)
T ss_pred HHHHhccCCCC------Cc-c---------c-C-----------------------------chHHHHHH--HHHHhHHH
Confidence 22222232210 00 0 0 0 01111111 01111111
Q ss_pred HHHHHHHHHHHHhhhhhcccccCChhHHHHHHHHHhcccccccCchhHHHHHHHHHhhcChhHHHHHHHHHHHHHHHHHH
Q 041759 330 LMVPGFGIGVVYYGMTLGIENLGFDIYLGVVFNALLEIPNLASTIPSFFLTFFLIQKWNRKSSLLVLFIISGICSIMAVV 409 (525)
Q Consensus 330 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~d~~g~~~~~~~~~~~~~~~~~~~~~ 409 (525)
.++............+.++++.+.+.. ........+ +.+++.++.+++.||+|+|+.+..+..+..++.+++..
T Consensus 225 ~~l~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~----~~~~~~~~~g~l~~r~g~~~~~~~~~~~~~~~~~~~~~ 298 (392)
T PRK12382 225 LALQGVGFAVIGTFVSLYFASKGWAMA--GFTLTAFGG----AFVLMRVLFGWMPDRFGGVKVAIVSLLVETVGLLLLWL 298 (392)
T ss_pred HHHHHHHHhHHHHHHHHHHHhcCCchh--HHHHHHHHH----HHHHHHHHHHHHHHhcCCCeehHHHHHHHHHHHHHHHH
Confidence 111122222222333444445454432 222222333 45588899999999999999998888888877766555
Q ss_pred hccccccchhHHHHHHHHHHHHHHHHHHHHHhhhccccCcchhhhhhHHHHHHHHHHHHHHHHHHhh--ccCchhHHHHH
Q 041759 410 ANDISNAGKRMRIGLELASLFSAYIAYTVIFIYAIELFPTCVRNSATSIMRLAIIFAAIFSSVLVAA--GSNNEFVSYGV 487 (525)
Q Consensus 410 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~r~~~~~~~~~~~~~g~~~~p~i~~~--~~~~~~~~~~~ 487 (525)
..+ .....+..++.+++.+...+.......|.+|+++|+++.|+.+....+|..++|.+.+. +..++...+.+
T Consensus 299 ~~~-----~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~ig~~~~g~l~~~~g~~~~~~~ 373 (392)
T PRK12382 299 APT-----AWVALAGAALTGAGCSLIFPALGVEVVKRVPSQVRGTALGGYAAFQDIAYGVSGPLAGMLATSFGYPSVFLA 373 (392)
T ss_pred ccc-----HHHHHHHHHHHHHHHHhHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCchHHHHH
Confidence 432 23445566667777777778777888899999999999999999999999999999985 33467777777
Q ss_pred HHHHHHHHHHHHHh
Q 041759 488 FGLVIICCGFFVIC 501 (525)
Q Consensus 488 ~~~~~~~~~~~~~~ 501 (525)
.+++.+++.++.+.
T Consensus 374 ~~~~~~~~~~~~~~ 387 (392)
T PRK12382 374 GAISAVLGIIVTIL 387 (392)
T ss_pred HHHHHHHHHHHHHh
Confidence 77777666655443
No 62
>PRK11652 emrD multidrug resistance protein D; Provisional
Probab=99.97 E-value=2.4e-28 Score=241.53 Aligned_cols=324 Identities=14% Similarity=0.100 Sum_probs=238.1
Q ss_pred ccceeeccccccchhhhhhhHHHHHHHHHHHhHHhhHhcccccCCchHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHH
Q 041759 100 ALTIISEWGLECSSAFIKGLPAASHFTGCLLGIVFLATLADSSLGRKNLLFLSCLTMSVATSLTIFSNNLWIYSLLRFFS 179 (525)
Q Consensus 100 ~~~i~~~~~~~~~s~~~~g~~~s~~~lg~~~~~~~~G~l~dr~~Grk~~~~~~~~~~~i~~~~~~~~~~~~~l~~~r~l~ 179 (525)
+|.+.+++|+ ++.+.+++.+++.++..+++++.|+++|| +|||+++.++.++.+++.++..++++++.+++.|++.
T Consensus 31 ~~~i~~~~~~---s~~~~~~~~~~~~~~~~~~~~~~G~l~Dr-~grr~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~ 106 (394)
T PRK11652 31 IADMARDLNV---REGAVQAVMAAYLLTYGLSQLFYGPLSDR-VGRRPVILVGMSIFILGTLVALFAHSLTVLIAASAIQ 106 (394)
T ss_pred HHHHHHHhCC---CHHHHHHHHHHHHHHHHHHHHhhhhHHHh-cCChHHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHH
Confidence 8899999999 99999999999999999999999999999 9999999999999999999999999999999999999
Q ss_pred hhcccchhhhhheeeEeeecCcchhhHHhHHHHHHHHHHHHHHHHH-HhccCCchHHHHHHHHHHHHHHHhHhheeecCC
Q 041759 180 GISRATIGTCTIVLLTEKVGTEWRGLVGILDSFFFTIGTLTLPAIA-YTNRSSSWTIIYLWTSIPTLVYSGLLYIFVSES 258 (525)
Q Consensus 180 G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~l~~~l~-~~~~~~~wr~~f~~~~~~~~~~~~~~~~~lpes 258 (525)
|++.+...+....+..|.+++++|+++.++.+.+..+|..++|.++ .+.+..+||+.|++.++..++..++..+++||+
T Consensus 107 g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~i~~~l~~~~g~~~~f~~~~~~~~~~~~~~~~~~~~~ 186 (394)
T PRK11652 107 GLGTGVGGVMARTLPRDLYEGTQLRHANSLLNMGILVSPLLAPLIGGLLTTLFGWRACYLFLLLLGAGVTFSMARWMPET 186 (394)
T ss_pred HhhhhHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccChHHHHHHHHHHHHHHHHHHHHhCCcc
Confidence 9999988888888889999999999999999999999999999884 455567999999998887776654555667776
Q ss_pred chHhhhcCCHHHHHHHHHhhCCCcCCccchhhhhhhccCCCCcccccccccchhhhhhhhcchhHHHHHHHHHHHHHHHH
Q 041759 259 PRWLFMQGRQEEAVEVIKSLSPIKDSNQLSLSLVSAVSFGHEPAASSKESSFLSSIRELFVRRWALERTLALMVPGFGIG 338 (525)
Q Consensus 259 p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~ 338 (525)
++. +++.++ . ...+++++++|.++...+..+.......
T Consensus 187 ~~~---~~~~~~-------~--------------------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 224 (394)
T PRK11652 187 RPA---DARRTR-------V--------------------------------LASYRTLLSNRRFNCYLLMLIGTLAGIA 224 (394)
T ss_pred Ccc---ccchhH-------H--------------------------------HHHHHHHHcChHHHHHHHHHHHHHHHHH
Confidence 421 000000 0 0356677788876655444433333333
Q ss_pred HHHhhhhhcccc-cCChhHHHHHHHHHhcccccccCchhHHHHHHHHHhhcChhHHHHHHHHHH-HHHHHHHHhcccccc
Q 041759 339 VVYYGMTLGIEN-LGFDIYLGVVFNALLEIPNLASTIPSFFLTFFLIQKWNRKSSLLVLFIISG-ICSIMAVVANDISNA 416 (525)
Q Consensus 339 ~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~d~~g~~~~~~~~~~~~~-~~~~~~~~~~~~~~~ 416 (525)
......+.+.++ +|.+....+.......+ +.+++.++.+++.||.+++........... +...........
T Consensus 225 ~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~----~~~~g~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--- 297 (394)
T PRK11652 225 VFEACSGVLMGAVLGLSSMTVSILFILPIP----AAFFGAWFAGRPNKRFSTLMWQSVICCLLAGLLMWIPGWFGVM--- 297 (394)
T ss_pred HHHHhChHHHHHHcCCCHHHHHHHHHHHHH----HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccc---
Confidence 333333444444 78787776666555444 666777888888888873332222222111 211111111111
Q ss_pred chhHHHHHHHHHHHHHHHHHHHHHhhhccccCcchhhhhhHHHHHHHHHHHHHHHHHHhhc
Q 041759 417 GKRMRIGLELASLFSAYIAYTVIFIYAIELFPTCVRNSATSIMRLAIIFAAIFSSVLVAAG 477 (525)
Q Consensus 417 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~r~~~~~~~~~~~~~g~~~~p~i~~~~ 477 (525)
.........++.+++.+...+...++..|..|+ .++++.++.+....+|..+++.+.+..
T Consensus 298 ~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~-~~g~~~~~~~~~~~lg~~~~~~~~~~~ 357 (394)
T PRK11652 298 NVWTLLVPAALFFFGAGMLFPLATSGAMEPFPY-LAGTAGALLGGLQNIGSGLAALLSAML 357 (394)
T ss_pred cHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccc-cchHHHHHHHHHHHHHHHHHHHHHHHc
Confidence 123445556677777788888888888898874 679999999999999999999998853
No 63
>PRK10473 multidrug efflux system protein MdtL; Provisional
Probab=99.97 E-value=2.6e-28 Score=241.08 Aligned_cols=321 Identities=15% Similarity=0.128 Sum_probs=230.1
Q ss_pred ccceeeccccccchhhhhhhHHHHHHHHHHHhHHhhHhcccccCCchHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHH
Q 041759 100 ALTIISEWGLECSSAFIKGLPAASHFTGCLLGIVFLATLADSSLGRKNLLFLSCLTMSVATSLTIFSNNLWIYSLLRFFS 179 (525)
Q Consensus 100 ~~~i~~~~~~~~~s~~~~g~~~s~~~lg~~~~~~~~G~l~dr~~Grk~~~~~~~~~~~i~~~~~~~~~~~~~l~~~r~l~ 179 (525)
+|.+.+++|. +..+.++..+.+.++..+++++.|+++|| +|||++++.+.++.+++.+++.++++++.+++.|+++
T Consensus 26 lp~~~~~~~~---s~~~~~~~~~~~~~~~~~~~~~~G~l~Dr-~g~r~~l~~~~~~~~i~~~~~~~~~~~~~~~~~~~l~ 101 (392)
T PRK10473 26 LPRIAADLNA---SEAQLHIAFSVYLAGMAAAMLFAGKIADR-SGRKPVAIPGAALFIIASLLCSLAETSSLFLAGRFLQ 101 (392)
T ss_pred HHHHHHHhCC---CHHHHHHHHHHHHHHHHHHHHhHhHHHHH-hCChHHHHHHHHHHHHHHHHHHHhCcHHHHHHHHHHH
Confidence 8999999999 99999999999999999999999999999 9999999999999999999999999999999999999
Q ss_pred hhcccchhhhhheeeEeeecCcchhhHHhHHHHHHHHHHHHHHHHHHh-ccCCchHHHHHHHHHHHHHHHhHhheeecCC
Q 041759 180 GISRATIGTCTIVLLTEKVGTEWRGLVGILDSFFFTIGTLTLPAIAYT-NRSSSWTIIYLWTSIPTLVYSGLLYIFVSES 258 (525)
Q Consensus 180 G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~l~~~l~~~-~~~~~wr~~f~~~~~~~~~~~~~~~~~lpes 258 (525)
|++.+...+...+++.|++|+++|+++.++.+....+|.+++|.++.. ....+||+.|++.++..++..++...++||+
T Consensus 102 g~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~i~~~~~~~i~~~l~~~~g~~~~~~~~~~~~~i~~~~~~~~~~~~ 181 (392)
T PRK10473 102 GIGAGCCYVVAFAILRDTLDDRRRAKVLSLLNGITCIIPVLAPVLGHLIMLKFPWQSLFYTMAAMGILVLLLSLFILKET 181 (392)
T ss_pred HhhhhHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcChHHHHHHHHHHHHHHHHHHHHHcCCC
Confidence 999999999999999999999999999999999999999999988554 4567999999999888877775656667775
Q ss_pred chHhhhcCCHHHHHHHHHhhCCCcCCccchhhhhhhccCCCCcccccccccchhhhhhhhcchhHHHHHHHHHHHHHHHH
Q 041759 259 PRWLFMQGRQEEAVEVIKSLSPIKDSNQLSLSLVSAVSFGHEPAASSKESSFLSSIRELFVRRWALERTLALMVPGFGIG 338 (525)
Q Consensus 259 p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~ 338 (525)
+.. +++.+ .+ . .+..++.++++.++...+...+......
T Consensus 182 ~~~---~~~~~---------------~~------------------~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 220 (392)
T PRK10473 182 RPA---RAPAA---------------SS------------------K-----PRENSESLLNRFFLSRLVITTLSVTVIL 220 (392)
T ss_pred CCc---ccCCc---------------cc------------------h-----HHHHHHHHhCHHHHHHHHHHHHHHHHHH
Confidence 320 00000 00 0 0233456677765554444333332222
Q ss_pred HHHhhhhhc-ccccCChhHHHHHHHHHhcccccccCchhHHHHHHHHHhhcChhHHHHHHHHHHHHHHHHHHhccccccc
Q 041759 339 VVYYGMTLG-IENLGFDIYLGVVFNALLEIPNLASTIPSFFLTFFLIQKWNRKSSLLVLFIISGICSIMAVVANDISNAG 417 (525)
Q Consensus 339 ~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~d~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 417 (525)
......+++ .+++|.+....+.......+ +.+++.++.+++.||+|||+.+.++..+..++.+.+......
T Consensus 221 ~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~----~~i~~~~~~~~l~~r~g~~~~~~~~~~~~~~~~~~~~~~~~~---- 292 (392)
T PRK10473 221 TFVNTSPVLLMEQMGFSRGEYAIIMALTAG----VSMTVSFSTPFALGIFKPRTLMLTSQVLFLAAGITLALSPSH---- 292 (392)
T ss_pred HHHHhCHHHHHHHcCCCHHHHHHHHHHHHH----HHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHH----
Confidence 222223333 34578887776666665555 666899999999999999999998888877777766655433
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHhhhccccCcchh-hhhhHHHHHHHHHHHHHHHHHHhh
Q 041759 418 KRMRIGLELASLFSAYIAYTVIFIYAIELFPTCVR-NSATSIMRLAIIFAAIFSSVLVAA 476 (525)
Q Consensus 418 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~r-~~~~~~~~~~~~~g~~~~p~i~~~ 476 (525)
+ .......+...+.+..++.. ...+..|.+.| +.+.++......+|..+++.+.+.
T Consensus 293 ~-~~~~~~~l~~~g~~~~~~~~--~~~~~~~~~~~~g~~~~~~~~~~~~g~~~~~~l~~~ 349 (392)
T PRK10473 293 A-VSLFGITLICAGFSVGFGVA--MSQALGPFSLRAGVASSTLGIAQVCGSSLWIWLAAV 349 (392)
T ss_pred H-HHHHHHHHHHHHHHHHhHHH--HHHHhccCcccccHHHHHHHHHHHHHHHHHHHHHHH
Confidence 2 22333333333333333333 22334444333 444444444445566666666653
No 64
>PRK10054 putative transporter; Provisional
Probab=99.97 E-value=2.1e-28 Score=240.90 Aligned_cols=341 Identities=12% Similarity=0.053 Sum_probs=249.0
Q ss_pred ccceeeccccccchhhhhhhHHHHHHHHHHHhHHhhHhcccccCCchHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHH
Q 041759 100 ALTIISEWGLECSSAFIKGLPAASHFTGCLLGIVFLATLADSSLGRKNLLFLSCLTMSVATSLTIFSNNLWIYSLLRFFS 179 (525)
Q Consensus 100 ~~~i~~~~~~~~~s~~~~g~~~s~~~lg~~~~~~~~G~l~dr~~Grk~~~~~~~~~~~i~~~~~~~~~~~~~l~~~r~l~ 179 (525)
.+.+++++|+ +..+.|++.+.+.++..+++++.|+++|| +|||++++++.++.+++.++.+++++++.++++|++.
T Consensus 31 ~~~l~~~~g~---s~~~~g~~~s~~~~~~~~~~~~~G~l~Dr-~g~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 106 (395)
T PRK10054 31 TIYLSRQYSL---SVDLIGYAMTIALTIGVVFSLGFGILADK-FDKKRYMLLAITAFASGFIAIPLVNNVTLVVLFFALI 106 (395)
T ss_pred HHHHHHHcCC---CHHHHHHHHHHHHHHHHHHHHHHHHHHhh-cCcchhHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHH
Confidence 4456788999 99999999999999999999999999999 9999999999999999999999999999999999999
Q ss_pred hhcccchhhhhheeeEeeecCcchhhHHhHHHHHHHHHHHHHHHHHHhccCCchHHHHHHHHHHHHHHHhHhheeecCCc
Q 041759 180 GISRATIGTCTIVLLTEKVGTEWRGLVGILDSFFFTIGTLTLPAIAYTNRSSSWTIIYLWTSIPTLVYSGLLYIFVSESP 259 (525)
Q Consensus 180 G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~l~~~l~~~~~~~~wr~~f~~~~~~~~~~~~~~~~~lpesp 259 (525)
|.+.+...+...++..|..|+++|+++.++.....++|.+++|.++..+...+||.+|++.++..++..++..+++||++
T Consensus 107 g~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~lg~~igp~l~~~l~~~g~~~~f~~~~~~~~i~~i~~~~~~~~~~ 186 (395)
T PRK10054 107 NCAYSVFSTVLKAWFADNLSSTSKTKIFSLNYTMLNIGWTVGPPLGTLLVMQSINLPFWLAAICSAFPLVFIQIWVQRSE 186 (395)
T ss_pred HHHHHHHHHHHHHHHHHhcCHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCcHHHHHHHHHHHHHHHHHHHHhccc
Confidence 98888888888899999999999999999999999999999999966554579999999988887776544555555532
Q ss_pred hHhhhcCCHHHHHHHHHhhCCCcCCccchhhhhhhccCCCCcccccccccchhhhhhhhcchhHHHHHHHHHHHHHHHHH
Q 041759 260 RWLFMQGRQEEAVEVIKSLSPIKDSNQLSLSLVSAVSFGHEPAASSKESSFLSSIRELFVRRWALERTLALMVPGFGIGV 339 (525)
Q Consensus 260 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~ 339 (525)
+ +++.++ ++ ..+.++.+++|.++...+..++.......
T Consensus 187 ~----~~~~~~-~~-------------------------------------~~~~~~~~~~~~~~~~~~~~~l~~~~~~~ 224 (395)
T PRK10054 187 K----AIATET-GS-------------------------------------VWSPSVLLQDKALLWFTCSGFLASFVSGA 224 (395)
T ss_pred c----ccccch-hh-------------------------------------hhhhhhhccCceehHHHHHHHHHHHHHHH
Confidence 1 000000 00 01234567777766655555444433322
Q ss_pred HHhhhhhcc---cccCChhHHHHHHHHHhcccccccCchhHHHHHHHHHhhcChhHHHHHHHHHHHHHHHHHHhcccccc
Q 041759 340 VYYGMTLGI---ENLGFDIYLGVVFNALLEIPNLASTIPSFFLTFFLIQKWNRKSSLLVLFIISGICSIMAVVANDISNA 416 (525)
Q Consensus 340 ~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~d~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 416 (525)
.....+.+. .+.+.+....+.......+ ..+......+++.||.++|+.+..+..+..++...+....+.
T Consensus 225 ~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~----~~~~~~~~~g~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~--- 297 (395)
T PRK10054 225 FASCISQYVMVVADSDFAEKVVAVVLPVNAA----MVVSLQYSVGRRLNAANIRPLMTAGTLCFVIGLVGFIFSGNS--- 297 (395)
T ss_pred hhhhHHHHHHHhcccchHHHHHHHHHHhhhh----heeeehhHHHHHHccCCchhHHHHHHHHHHHHHHHHHHcchH---
Confidence 111122222 3345555555555555444 555667788899999999999888887777777666543222
Q ss_pred chhHHHHHHHHHHHHHHHHHHHHHhhhccccCcchhhhhhHHHHHHHHHHHHHHHHHHhh--ccCchhHHHHHHHHHHHH
Q 041759 417 GKRMRIGLELASLFSAYIAYTVIFIYAIELFPTCVRNSATSIMRLAIIFAAIFSSVLVAA--GSNNEFVSYGVFGLVIIC 494 (525)
Q Consensus 417 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~r~~~~~~~~~~~~~g~~~~p~i~~~--~~~~~~~~~~~~~~~~~~ 494 (525)
+....+...+.+++.....|.....+.+..|++.++++.+..+ ...+|..++|.+.|. +..+....+.+.+.+..+
T Consensus 298 -~~~~~~~~~~~~~g~~~~~p~~~~~~~~~~p~~~~~~~~~~~~-~~~~G~~~Gp~~~G~l~~~~g~~~~~~~~~~~~~~ 375 (395)
T PRK10054 298 -LLLWGMSAAVFTVGEIIYAPGEYMLIDHIAPPGMKASYFSAQS-LGWLGAAINPLVSGVILTTLPPWSLFVILALAIVA 375 (395)
T ss_pred -HHHHHHHHHHHHHHHHHHHhhHHHHHHHhCCcccceehHhHHH-HHHHHHHHHHHHHHHHHHHcChhhHHHHHHHHHHH
Confidence 3344556677777777777888888999999999999988654 567899999999985 333455555554444433
Q ss_pred H
Q 041759 495 C 495 (525)
Q Consensus 495 ~ 495 (525)
+
T Consensus 376 ~ 376 (395)
T PRK10054 376 A 376 (395)
T ss_pred H
Confidence 3
No 65
>TIGR00883 2A0106 metabolite-proton symporter. This model represents the metabolite:H+ symport subfamily of the major facilitator superfamily (pfam00083), including citrate-H+ symporters, dicarboxylate:H+ symporters, the proline/glycine-betaine transporter ProP, etc.
Probab=99.97 E-value=9e-29 Score=244.87 Aligned_cols=329 Identities=19% Similarity=0.187 Sum_probs=226.7
Q ss_pred ccceeeccccccchhhhhhhHHHH-----HHHHHHHhHHhhHhcccccCCchHHHHHHHHHHHHHHHHHHhhhhHH----
Q 041759 100 ALTIISEWGLECSSAFIKGLPAAS-----HFTGCLLGIVFLATLADSSLGRKNLLFLSCLTMSVATSLTIFSNNLW---- 170 (525)
Q Consensus 100 ~~~i~~~~~~~~~s~~~~g~~~s~-----~~lg~~~~~~~~G~l~dr~~Grk~~~~~~~~~~~i~~~~~~~~~~~~---- 170 (525)
.+.+.+++.... ++.+.+++.+. ..++..+++++.|+++|| +|||+++.++.++.+++.++++++++++
T Consensus 16 ~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~i~~~~~G~l~dr-~g~r~~l~~~~~~~~~~~~~~~~~~~~~~~~~ 93 (394)
T TIGR00883 16 AVLVFHTFFPPS-GDPLVALLATFATFAAGFLARPLGAIVFGHFGDR-IGRKKTLVITLLMMGIGTLLIGLLPSYATIGI 93 (394)
T ss_pred HHHHHHHhcCCC-CChHHHHHHHHHHHHHHHHHhhhHHHHhhhhhhh-hhhHHHHHHHHHHHHHHHHHHhhCCChhhhHH
Confidence 555555543210 44555554433 334445789999999999 9999999999999999999999998875
Q ss_pred ----HHHHHHHHHhhcccchhhhhheeeEeeecCcchhhHHhHHHHHHHHHHHHHHHHHHhc---------cCCchHHHH
Q 041759 171 ----IYSLLRFFSGISRATIGTCTIVLLTEKVGTEWRGLVGILDSFFFTIGTLTLPAIAYTN---------RSSSWTIIY 237 (525)
Q Consensus 171 ----~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~l~~~l~~~~---------~~~~wr~~f 237 (525)
.+++.|+++|++.+...+....++.|++++++|++..++.+.+..+|.+++++++..+ ...+||+.|
T Consensus 94 ~~~~~~~~~r~l~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~G~~i~~~~~~~~~~~~~~~~~~~~~w~~~~ 173 (394)
T TIGR00883 94 WAPILLLLARLIQGFSLGGEWGGAALYLAEYAPPGKRGFYGSFQQVGAPVGLLLAALTVLLLSYLLGDDALLEWGWRIPF 173 (394)
T ss_pred HHHHHHHHHHHHHHhhccccccccHHHhhhcCCcccchHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHHHhhccchHHHH
Confidence 5889999999999999999999999999999999999999999999999998875432 357999999
Q ss_pred HHHHHHHHHHHhHhheeecCCchHhhhcCCHHHHHHHHHhhCCCcCCccchhhhhhhccCCCCcccccccccchhhhhhh
Q 041759 238 LWTSIPTLVYSGLLYIFVSESPRWLFMQGRQEEAVEVIKSLSPIKDSNQLSLSLVSAVSFGHEPAASSKESSFLSSIREL 317 (525)
Q Consensus 238 ~~~~~~~~~~~~~~~~~lpesp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 317 (525)
++.+++.++.. +....+||+|++...+ + + .+ + . ..+.++.
T Consensus 174 ~~~~~~~~~~~-~~~~~~~~~~~~~~~~-------~------~-~~-~-------------------~-----~~~~~~~ 213 (394)
T TIGR00883 174 LVSAVLVLIGL-YLRRNLEETPVFEKAQ-------E------K-HK-K-------------------K-----RGPIRET 213 (394)
T ss_pred HHHHHHHHHHH-HHHHhcCCChhHHHHH-------h------c-cc-c-------------------c-----cCCHHHH
Confidence 98887766655 4445566654321000 0 0 00 0 0 0234455
Q ss_pred hcchh--HHHHHHHHHHHHHHHHHHHhhhhhcc-cccCChhHHHHHHHHHhcccccccCchhHHHHHHHHHhhcChhHHH
Q 041759 318 FVRRW--ALERTLALMVPGFGIGVVYYGMTLGI-ENLGFDIYLGVVFNALLEIPNLASTIPSFFLTFFLIQKWNRKSSLL 394 (525)
Q Consensus 318 ~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~d~~g~~~~~~ 394 (525)
+++++ ++......+.............+.+. ++.+.+....+.......+ +.+++.++.+++.||+|||+.+.
T Consensus 214 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~----~~~~~~~~~g~l~dr~g~~~~~~ 289 (394)
T TIGR00883 214 LTKHRKPFLLGLGLVIATTTTFYLITTYLPTYLTQTLGLSANSALLVLMLSLI----LFFITIPLSGALSDRIGRRPVLI 289 (394)
T ss_pred HHhchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCChhHHHHHHHHHHH----HHHHHHHHHHHHHHHhchHHHHH
Confidence 55544 23323333333333333333445555 5577777777766666665 66688999999999999999877
Q ss_pred HHHHHHHHHH-HHHHHhccccccchhHHHHHHHHHHHHHHHHHHHHHhhhccccCcchhhhhhHHHH-HHHHHHHHHHHH
Q 041759 395 VLFIISGICS-IMAVVANDISNAGKRMRIGLELASLFSAYIAYTVIFIYAIELFPTCVRNSATSIMR-LAIIFAAIFSSV 472 (525)
Q Consensus 395 ~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~r~~~~~~~~-~~~~~g~~~~p~ 472 (525)
....+..+.. ..+...... .+........++.+++.+...+...++..|.+|++.|+++.++.. ....+|..++|.
T Consensus 290 ~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~g~~~~p~ 367 (394)
T TIGR00883 290 IFTVLAALLAVPLLMALLDS--GSFTLFFFLVLGLALIGGMYTGPMGSFLPELFPTEVRYTGASLAYNLAGAIFGGFAPY 367 (394)
T ss_pred HHHHHHHHHHHHHHHHHhcC--CchHHHHHHHHHHHHHHHHHhhhHHHHHHHhCCccceeeEeeehhHhHHHHHhhHHHH
Confidence 5555444333 222222111 123344455666677777788889999999999999999999854 445678889999
Q ss_pred HHhh
Q 041759 473 LVAA 476 (525)
Q Consensus 473 i~~~ 476 (525)
+.|.
T Consensus 368 ~~g~ 371 (394)
T TIGR00883 368 IAAA 371 (394)
T ss_pred HHHH
Confidence 9885
No 66
>KOG1330 consensus Sugar transporter/spinster transmembrane protein [Carbohydrate transport and metabolism]
Probab=99.97 E-value=2.1e-31 Score=247.96 Aligned_cols=359 Identities=16% Similarity=0.203 Sum_probs=249.4
Q ss_pred HHHHHHHHHHHHHHHHHHhhhcccCccccccCCCCCCCCCCCCCCCCCCceecCCCCccccceeeccccccchhhhhhhH
Q 041759 41 QAILVSLASLFDSQQSFISVYTEAEPTWHCLNNTTCSSASNICMFPKSSWAWDGNPTTTALTIISEWGLECSSAFIKGLP 120 (525)
Q Consensus 41 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~c~~~~~~~~~~~~p~~~~~~i~~~~~~~~~s~~~~g~~ 120 (525)
.+.++++..+++.+|...+..+ .+.+++.||+ +++..|++
T Consensus 34 ~l~il~~vnlmny~Dr~~iagv-------------------------------------~~~v~~~fni---~~s~~Gll 73 (493)
T KOG1330|consen 34 TLVILCLVNLMNYADRYTIAGV-------------------------------------LKEVQTYFNI---SDSELGLL 73 (493)
T ss_pred HHHHHHHHHHHHHhhhhhhhhh-------------------------------------hHHHHHhcCC---Cchhccch
Confidence 6888999999999999999999 9999999999 99999999
Q ss_pred HHHHHHHHHHhHHhhHhcccccCCchHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHhhcccchhhhhheeeEeeecC
Q 041759 121 AASHFTGCLLGIVFLATLADSSLGRKNLLFLSCLTMSVATSLTIFSNNLWIYSLLRFFSGISRATIGTCTIVLLTEKVGT 200 (525)
Q Consensus 121 ~s~~~lg~~~~~~~~G~l~dr~~Grk~~~~~~~~~~~i~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~ 200 (525)
.+.+.+.+.+++|++|+++|| |.||+++.+|.+++.++.++++++..||+++++|.+.|+|.+...|.++++++|.+|.
T Consensus 74 ~~vf~v~~~i~sPl~gyLadr-yNR~~v~~vG~~iW~~Av~~~~fs~~Fwq~~l~R~~vGiGeAs~~~ia~s~IaD~f~~ 152 (493)
T KOG1330|consen 74 QTVFIVVFMIASPLFGYLADR-YNRKRVIAVGIFIWTLAVFASGFSNHFWQVLLCRGFVGIGEASYSPIAPSLIADSFPD 152 (493)
T ss_pred hHHHHHHHHHHHHHHHHHHhh-cCcceEEeeHHHHHHHHHHHHHHHHHHHHHHHHHHHhccchhhhcccchhHhhhcCcc
Confidence 999999999999999999999 9999999999999999999999999999999999999999999999999999999999
Q ss_pred cchhhHHhHHHHHHHHHHHHHHHHHHhcc-C-CchHHHHHHHHHHHHHHHhHhheeecCCchHhhhcCCHHHHHHHHHhh
Q 041759 201 EWRGLVGILDSFFFTIGTLTLPAIAYTNR-S-SSWTIIYLWTSIPTLVYSGLLYIFVSESPRWLFMQGRQEEAVEVIKSL 278 (525)
Q Consensus 201 ~~r~~~~~~~~~~~~~G~~l~~~l~~~~~-~-~~wr~~f~~~~~~~~~~~~~~~~~lpesp~~~~~~~~~~~~~~~~~~~ 278 (525)
++|++++++++.+..+|..+|.+.+..+. . ..|||.|+..+++++++.++..++++|+++ +..++..
T Consensus 153 ~~Rs~~~~ify~~ipvGsglG~vvgs~va~~~~~Wr~af~~~avl~vi~~~L~~~f~~eP~r-----ga~~~~~------ 221 (493)
T KOG1330|consen 153 DKRSRVLGIFYFAIPVGSGLGYVVGSVVASLTFWWRWAFRGSAVLGVIVGLLVFLFVREPER-----GARDEVD------ 221 (493)
T ss_pred hhhhHHHHHhhhhcccccceeEEeeeeeccCccceEEEEEeehHHHHHHHHHHHhhccCccc-----ccccccc------
Confidence 99999999999999999999998865543 2 349999999999999999888888888653 1111100
Q ss_pred CCCcCCccchhhhhhhccCCCCcccccccccchhhhhhhhcchhHHHHHHHHHHHHHHHHHHHhhhh----hcccccCCh
Q 041759 279 SPIKDSNQLSLSLVSAVSFGHEPAASSKESSFLSSIRELFVRRWALERTLALMVPGFGIGVVYYGMT----LGIENLGFD 354 (525)
Q Consensus 279 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~ 354 (525)
+ .++. .+...+..++.+.+.+++.+....+......+..+...|..| ++.+-.+.+
T Consensus 222 -~-~~~~------------------~~~~ts~~kDl~~l~~~~v~v~~sl~~~a~~fv~Gs~sww~p~~~~~~~~~~~~~ 281 (493)
T KOG1330|consen 222 -G-ENKM------------------VKPFTSVWKDLKVLAKIKVFVLSSLGIIAAQFVIGSLSWWAPAFIYYSYELIGFD 281 (493)
T ss_pred -c-CCcC------------------CCCccchHHHHHHHHccCceeeehHHHHHHHHhccccchhhhhHHHHHHHHhCCc
Confidence 0 0000 000111123455566655544444444444443332222222 222224455
Q ss_pred hHHHHHHHHHhcccccccCchhHHHHHHHHHhh----cChhHH----HHHHHHHHHHHHHHHHhccccccchhHHHHHHH
Q 041759 355 IYLGVVFNALLEIPNLASTIPSFFLTFFLIQKW----NRKSSL----LVLFIISGICSIMAVVANDISNAGKRMRIGLEL 426 (525)
Q Consensus 355 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~d~~----g~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 426 (525)
......+.++... ++.+|.+++|.++||+ .+-... ..+.....++...+...+..........+++.+
T Consensus 282 ~~~~~ifg~vt~~----~G~lGvl~Ggiisd~~~~~~~~~~~~~~~q~~~~~g~~~s~~~L~~~~~~~~~s~~~~~il~~ 357 (493)
T KOG1330|consen 282 HNATLIFGGVTCA----GGSLGVLFGGIISDKLSRIFPNSGTLRASQLSAALGAPLSIPFLFLFPAFTSSSMIFGLILFL 357 (493)
T ss_pred cccchhhhhHHHh----hchhhheehHHHHHHHHHhcccccchhHHHHHHhhhhhHHHHHHHHHHhhhhHHHHHHHHHHH
Confidence 5555666666666 5556666777777774 321111 112222222222222222110011222233333
Q ss_pred HHHHHHHHHHHHHHhhhccccCcchhhhhhHHHHHHH-HHHHHHHHHHHh
Q 041759 427 ASLFSAYIAYTVIFIYAIELFPTCVRNSATSIMRLAI-IFAAIFSSVLVA 475 (525)
Q Consensus 427 ~~~~~~~~~~~~~~~~~~~~~p~~~r~~~~~~~~~~~-~~g~~~~p~i~~ 475 (525)
+.-......++...-+..|+.|++.|.++.++...+. .+|.+-+|++.|
T Consensus 358 ~g~~~~~~~~a~n~~i~l~vV~p~~Rt~a~a~~~~~~h~fgd~~~p~ivG 407 (493)
T KOG1330|consen 358 VGETISWFNWATNNPIFLEVVPPSRRTTAYALDTVFEHIFGDAASPYIVG 407 (493)
T ss_pred HHHHHHhcccccccceeeEecCcccccHHHHHHHHHHHHhccCCCcceeh
Confidence 3333333344566677889999999999999998776 455666676766
No 67
>PRK11646 multidrug resistance protein MdtH; Provisional
Probab=99.97 E-value=3.2e-28 Score=240.00 Aligned_cols=343 Identities=10% Similarity=0.060 Sum_probs=246.2
Q ss_pred ccceeeccccccchhhhhhhHHHHHHHHHHHhHHhhHhcccccCCchHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHH
Q 041759 100 ALTIISEWGLECSSAFIKGLPAASHFTGCLLGIVFLATLADSSLGRKNLLFLSCLTMSVATSLTIFSNNLWIYSLLRFFS 179 (525)
Q Consensus 100 ~~~i~~~~~~~~~s~~~~g~~~s~~~lg~~~~~~~~G~l~dr~~Grk~~~~~~~~~~~i~~~~~~~~~~~~~l~~~r~l~ 179 (525)
.+.+++++|+ +..+.|++.+.+.++..+.+++.|+++|| +|||+++..+.++.+++.+++.++++++.+++.|+++
T Consensus 34 ~~~~~~~~g~---s~~~~gl~~~~~~l~~~~~~~~~G~l~dr-~g~k~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~ 109 (400)
T PRK11646 34 SIRFVDQLGW---AAVMVGIALGLRQFIQQGLGIFGGAIADR-FGAKPMIVTGMLMRAAGFATMAIAHEPWLLWLSCILS 109 (400)
T ss_pred HHHHHHHhCC---cHHHHHHHHHHHHHHHHHHHhhhhHHHHH-hCchHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHH
Confidence 3456789999 99999999999999999999999999999 9999999999999999999999999999999999999
Q ss_pred hhcccchhhhhheeeEeeecCcchhhHHhHHHHHHHHHHHHHHHHHHhccCCchHHHHHHHHHHHHHHHhHhheeecCCc
Q 041759 180 GISRATIGTCTIVLLTEKVGTEWRGLVGILDSFFFTIGTLTLPAIAYTNRSSSWTIIYLWTSIPTLVYSGLLYIFVSESP 259 (525)
Q Consensus 180 G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~l~~~l~~~~~~~~wr~~f~~~~~~~~~~~~~~~~~lpesp 259 (525)
|++.+...+...+++.|++|+++|+++.++.....++|..+||.++..+..++||+.|++.++..++..++..+++||.+
T Consensus 110 g~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~g~~ig~~l~g~l~~~g~~~~f~~~~~~~~~~~i~~~~~~~~~~ 189 (400)
T PRK11646 110 GLGGTLFDPPRTALVIKLIRPHQRGRFFSLLMMQDSAGAVIGALLGSWLLQYDFRLVCATGAVLFVLAAAFNAWLLPAYK 189 (400)
T ss_pred HHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHhCCccc
Confidence 99999888999999999999999999999999999999999999955444789999999988877766534444555421
Q ss_pred hHhhhcCCHHHHHHHHHhhCCCcCCccchhhhhhhccCCCCcccccccccchhhhhhhhcchhHHHHHHHHHHHHHHHHH
Q 041759 260 RWLFMQGRQEEAVEVIKSLSPIKDSNQLSLSLVSAVSFGHEPAASSKESSFLSSIRELFVRRWALERTLALMVPGFGIGV 339 (525)
Q Consensus 260 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~ 339 (525)
. +++.++ . ..++++++++|.++...+..+........
T Consensus 190 ~----~~~~~~----------------------------------~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 226 (400)
T PRK11646 190 L----STVRTP----------------------------------V-----REGMTRVLRDKRFVTYVLTLTGYYMLAVQ 226 (400)
T ss_pred c----cccchh----------------------------------h-----HHHHHHHHcCchHHHHHHHHHHHHHHHHH
Confidence 0 000000 0 02456677787755443333222222222
Q ss_pred HHhhhhhcccccCChhHHHHHHHHHhcccccccCchhHHHHHHHH-HhhcChhHHHHHHHHHHHHHHHHHHhccccccch
Q 041759 340 VYYGMTLGIENLGFDIYLGVVFNALLEIPNLASTIPSFFLTFFLI-QKWNRKSSLLVLFIISGICSIMAVVANDISNAGK 418 (525)
Q Consensus 340 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~-d~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 418 (525)
.....|.+.++.+.++...+...+...+ +.+.+....+++. ||++.++.+..+..+.+++.+++...++.
T Consensus 227 ~~~~~p~~~~~~~~~~~~~g~l~~~~~~----~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~l~~~~~~----- 297 (400)
T PRK11646 227 VMLMLPIMVNDIAGSPSAVKWMYAIEAC----LSLTLLYPIARWSEKRFRLEHRLMAGLLIMSLSMFPIGMVSNL----- 297 (400)
T ss_pred HHHhhhhhHHhhcCCchHHHHHHHHHHH----HHHHHHHHHHHHHHHhcchhHHHHHHHHHHHHHHHHHHHhhhH-----
Confidence 2344577766655555555555544433 2223333344444 45666666677777777666655544332
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHhhhccccCcchhhhhhHHHHHHHHHHHHHHHHHHhhccC-----c-hhHHHHHHHHHH
Q 041759 419 RMRIGLELASLFSAYIAYTVIFIYAIELFPTCVRNSATSIMRLAIIFAAIFSSVLVAAGSN-----N-EFVSYGVFGLVI 492 (525)
Q Consensus 419 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~r~~~~~~~~~~~~~g~~~~p~i~~~~~~-----~-~~~~~~~~~~~~ 492 (525)
....+..++.+.+.+...|...+++.+..|++.|+++.|+.+....+|..++|.+.|...+ + ....+...+++.
T Consensus 298 ~~~~~~~~l~~~g~~~~~p~~~~~~~~~~p~~~~g~~~g~~~~~~~~g~~ig~~l~G~l~~~~~~~~~~~~~~~~~~~~~ 377 (400)
T PRK11646 298 QQLFTLICLFYIGSIIAEPARETLSASLADARARGSYMGFSRLGLALGGAIGYIGGGWLFDLGKALNQPELPWMMLGIIG 377 (400)
T ss_pred HHHHHHHHHHHHHHHHHHccHHHHHHhcCCcccchhhhhHHHHHHHHHHHhcccchHHHHHHHhhcCCcchHHHHHHHHH
Confidence 2344444556666667777888999999999999999999999999999999999985211 1 344555545555
Q ss_pred HHHHHH
Q 041759 493 ICCGFF 498 (525)
Q Consensus 493 ~~~~~~ 498 (525)
+++.+.
T Consensus 378 ~~~~~~ 383 (400)
T PRK11646 378 LITLLA 383 (400)
T ss_pred HHHHHH
Confidence 444443
No 68
>cd06174 MFS The Major Facilitator Superfamily (MFS) is a large and diverse group of secondary transporters that includes uniporters, symporters, and antiporters. MFS proteins facilitate the transport across cytoplasmic or internal membranes of a variety of substrates including ions, sugar phosphates, drugs, neurotransmitters, nucleosides, amino acids, and peptides. They do so using the electrochemical potential of the transported substrates. Uniporters transport a single substrate, while symporters and antiporters transport two substrates in the same or in opposite directions, respectively, across membranes. MFS proteins are typically 400 to 600 amino acids in length, and the majority contain 12 transmembrane alpha helices (TMs) connected by hydrophilic loops. The N- and C-terminal halves of these proteins display weak similarity and may be the result of a gene duplication/fusion event. Based on kinetic studies and the structures of a few bacterial superfamily members, GlpT (glycerol-3
Probab=99.97 E-value=4.6e-28 Score=235.85 Aligned_cols=324 Identities=21% Similarity=0.309 Sum_probs=268.2
Q ss_pred ccceeeccccccchhhhhhhHHHHHHHHHHHhHHhhHhcccccCCchHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHH
Q 041759 100 ALTIISEWGLECSSAFIKGLPAASHFTGCLLGIVFLATLADSSLGRKNLLFLSCLTMSVATSLTIFSNNLWIYSLLRFFS 179 (525)
Q Consensus 100 ~~~i~~~~~~~~~s~~~~g~~~s~~~lg~~~~~~~~G~l~dr~~Grk~~~~~~~~~~~i~~~~~~~~~~~~~l~~~r~l~ 179 (525)
.|.+.+++|. +..+.+++.+.+.++..+++++.|+++|| +|||+.+.++.++..++.++..+.++++.+++.|++.
T Consensus 22 ~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~g~~~d~-~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 97 (352)
T cd06174 22 LPLLAEDLGL---SASQAGLIVSAFSLGYALGSLLAGYLSDR-FGRRRVLLLGLLLFALGSLLLAFASSLWLLLVGRFLL 97 (352)
T ss_pred HHHHHHHcCC---CHHHHHHHHHHHHHHHHHHHHhHHHHHHH-hCCchhhHHHHHHHHHHHHHHHHhccHHHHHHHHHHH
Confidence 8888999999 99999999999999999999999999999 9999999999999999999999999999999999999
Q ss_pred hhcccchhhhhheeeEeeecCcchhhHHhHHHHHHHHHHHHHHHHH-HhccCCchHHHHHHHHHHHHHHHhHhheeecCC
Q 041759 180 GISRATIGTCTIVLLTEKVGTEWRGLVGILDSFFFTIGTLTLPAIA-YTNRSSSWTIIYLWTSIPTLVYSGLLYIFVSES 258 (525)
Q Consensus 180 G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~l~~~l~-~~~~~~~wr~~f~~~~~~~~~~~~~~~~~lpes 258 (525)
|++.+...+...+++.|++|+++|++.+++.+.+..+|..++|.++ .+.+..+||+.+++.+++.++.. +...+++
T Consensus 98 g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~-- 174 (352)
T cd06174 98 GLGGGALYPAAAALIAEWFPPKERGRALGLFSAGFGLGALLGPLLGGLLAESLGWRWLFLILAILGLLLA-LLLLFLL-- 174 (352)
T ss_pred HcccccccHhHHHHHHHhCCccchhhhhhHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHH-HHHHHHH--
Confidence 9999999999999999999999999999999999999999999984 45556689999999888887766 3322211
Q ss_pred chHhhhcCCHHHHHHHHHhhCCCcCCccchhhhhhhccCCCCcccccccccchhhhhhhhcchhHHHHHHHHHHHHHHHH
Q 041759 259 PRWLFMQGRQEEAVEVIKSLSPIKDSNQLSLSLVSAVSFGHEPAASSKESSFLSSIRELFVRRWALERTLALMVPGFGIG 338 (525)
Q Consensus 259 p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~ 338 (525)
|.++...+..+.......
T Consensus 175 --------------------------------------------------------------~~~~~~~~~~~~~~~~~~ 192 (352)
T cd06174 175 --------------------------------------------------------------RLLLLLALAFFLLSFGYY 192 (352)
T ss_pred --------------------------------------------------------------HHHHHHHHHHHHHHhHHH
Confidence 222333333444444444
Q ss_pred HHHhhhhhcccc-cCChhHHHHHHHHHhcccccccCchhHHHHHHHHHhhcChh-HHHHHHHHHHHHHHHHHHhcccccc
Q 041759 339 VVYYGMTLGIEN-LGFDIYLGVVFNALLEIPNLASTIPSFFLTFFLIQKWNRKS-SLLVLFIISGICSIMAVVANDISNA 416 (525)
Q Consensus 339 ~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~d~~g~~~-~~~~~~~~~~~~~~~~~~~~~~~~~ 416 (525)
......+.+.++ .+.+..+.+.......+ +.+++.++.+++.||++||+ .+..+..+..++.+......+
T Consensus 193 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~---- 264 (352)
T cd06174 193 GLLTYLPLYLQEVLGLSAAEAGLLLSLFGL----GGILGALLGGLLSDRLGRRRLLLLIGLLLAALGLLLLALAPS---- 264 (352)
T ss_pred HHHHHHHHHHHHhcCCCHHHHHHHHHHHHH----HHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHhcc----
Confidence 444445555555 37787777777777766 77799999999999999999 888888888888877766543
Q ss_pred chhHHHHHHHHHHHHHHHHHHHHHhhhccccCcchhhhhhHHHHHHHHHHHHHHHHHHhh--ccCchhHHHHHHHHHHHH
Q 041759 417 GKRMRIGLELASLFSAYIAYTVIFIYAIELFPTCVRNSATSIMRLAIIFAAIFSSVLVAA--GSNNEFVSYGVFGLVIIC 494 (525)
Q Consensus 417 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~r~~~~~~~~~~~~~g~~~~p~i~~~--~~~~~~~~~~~~~~~~~~ 494 (525)
+....+..++.+++.+...+....+..|..|+++|++..++.+....+|..++|.+.+. +..++...+.+.+++.++
T Consensus 265 -~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~g~l~~~~~~~~~~~~~~~~~~i 343 (352)
T cd06174 265 -LALLLVALLLLGFGLGFAFPALLTLASELAPPEARGTASGLFNTFGSLGGALGPLLAGLLLDTGGYGGVFLILAALALL 343 (352)
T ss_pred -HHHHHHHHHHHHHHHhccchhHHHHHHhhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccCcchHHHHHHHHHHH
Confidence 34566778888888888899999999999999999999999999999999999999985 345677778888777777
Q ss_pred HHHHHHh
Q 041759 495 CGFFVIC 501 (525)
Q Consensus 495 ~~~~~~~ 501 (525)
+.+..++
T Consensus 344 ~~i~~~~ 350 (352)
T cd06174 344 AALLLLL 350 (352)
T ss_pred HHHHhee
Confidence 6665543
No 69
>TIGR00885 fucP L-fucose:H+ symporter permease. This family describes the L-fucose permease in bacteria. L-fucose(6-deoxy-L-galactose) is a monosaccharide found in glycoproteins and cell wall polysaccharides. L-fucose is used in bacteria through an inducible pathway mediated by atleast four enzymes: a permease, isomerase, kinase and an aldolase which are encoded by fucP, fucI, fucK, fucA respectively. The fuc genes belong to a regulon comprising of four linked operons: fucO, fucA, fucPIK and fucR. The positive regulator is encoded by fucR, whose protein responds to fuculose-1-phosphate, which acts as an effector.
Probab=99.97 E-value=4.9e-28 Score=238.56 Aligned_cols=340 Identities=13% Similarity=0.022 Sum_probs=251.2
Q ss_pred HHHHHHHHHHHHHHHHHhhhcccCccccccCCCCCCCCCCCCCCCCCCceecCCCCccccceeeccccccchhhhhhhHH
Q 041759 42 AILVSLASLFDSQQSFISVYTEAEPTWHCLNNTTCSSASNICMFPKSSWAWDGNPTTTALTIISEWGLECSSAFIKGLPA 121 (525)
Q Consensus 42 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~c~~~~~~~~~~~~p~~~~~~i~~~~~~~~~s~~~~g~~~ 121 (525)
+.++++..+..++........ .|.+++++|+ +..+.|++.
T Consensus 5 ~~~~~~~f~~~G~~~~~~~~l-------------------------------------~~~~~~~~~~---s~~~~g~l~ 44 (410)
T TIGR00885 5 FALITSLFALWGFANDITNPM-------------------------------------VPQFQQAFTL---TAFQAALVQ 44 (410)
T ss_pred HHHHHHHHHHHHHHHHhHHHH-------------------------------------HHHHHHHhCC---CHHHHHHHH
Confidence 456667777777777777777 8999999999 999999999
Q ss_pred HHHHHHHHHhHHhhHhcccccCCchHHHHHHHHHHHHHHHHHHh---hhhHHHHHHHHHHHhhcccchhhhhheeeEeee
Q 041759 122 ASHFTGCLLGIVFLATLADSSLGRKNLLFLSCLTMSVATSLTIF---SNNLWIYSLLRFFSGISRATIGTCTIVLLTEKV 198 (525)
Q Consensus 122 s~~~lg~~~~~~~~G~l~dr~~Grk~~~~~~~~~~~i~~~~~~~---~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~ 198 (525)
+.+.+++.+++++.|++.|| +|||++++++.++++++.++... .++++.+++.|++.|+|.|...+....++.+..
T Consensus 45 s~~~~g~~i~~~~~g~l~~r-~G~r~~~~~g~~l~~~g~~l~~~~~~~~~~~~~l~~~~l~G~g~g~~~~~~~~~~~~~~ 123 (410)
T TIGR00885 45 SAFYGGYFIMAIPAAIFMKK-LSYKAGILLGLFLYALGAFLFWPAAEIMNYTLFLVGLFILTAGLGFLETAANPYILVMG 123 (410)
T ss_pred HHHHHHHHHHHHHHHHHHHH-hCchHHHHHHHHHHHHHHHHHHHHHhhccHHHHHHHHHHHHhhHHHHHhhhhHHHHHHC
Confidence 99999999999999999999 99999999999999999988654 368999999999999999999999999999999
Q ss_pred cCcchhhHHhHHHHHHHHHHHHHHHHHHhc-c--------------------------CCchHHHHHHHHHHHHHHHhHh
Q 041759 199 GTEWRGLVGILDSFFFTIGTLTLPAIAYTN-R--------------------------SSSWTIIYLWTSIPTLVYSGLL 251 (525)
Q Consensus 199 ~~~~r~~~~~~~~~~~~~G~~l~~~l~~~~-~--------------------------~~~wr~~f~~~~~~~~~~~~~~ 251 (525)
|+++|++.+++.+...++|..++|.++..+ . ..+||++|++.+++.++..++.
T Consensus 124 ~~~~~~~~~~~~~~~~~lG~~~g~~i~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~~fl~~a~~~~~~~~~~ 203 (410)
T TIGR00885 124 PESTATRRLNLAQSFNPFGSIIGMVVAQQLILSNLPHQSQDVLDKLSPEELSAIKHSDLASVQTPYMIIGAVVLAVALLI 203 (410)
T ss_pred CHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCccchhhhhhhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999999999999884432 1 1359999999888777665232
Q ss_pred h-eeecCCchHhhhcCCHHHHHHHHHhhCCCcCCccchhhhhhhccCCCCcccccccccchhhhhhhhcchhHHHHHHHH
Q 041759 252 Y-IFVSESPRWLFMQGRQEEAVEVIKSLSPIKDSNQLSLSLVSAVSFGHEPAASSKESSFLSSIRELFVRRWALERTLAL 330 (525)
Q Consensus 252 ~-~~lpesp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~ 330 (525)
. ..+||.++ ++ ++ + .. . ....++++|+|.++...+..
T Consensus 204 ~~~~~p~~~~-----~~-~~---------~------------------~~----~-----~~~~~~~~~~~~~~~~~l~~ 241 (410)
T TIGR00885 204 MLTKMPALNH-----SD-AK---------Q------------------IS----F-----SASLSRLARIRHYREGVIAQ 241 (410)
T ss_pred HHhcCCCCCc-----cc-cc---------c------------------cc----c-----hhhHHHHHhChhHHHHHHHH
Confidence 2 11332110 00 00 0 00 0 01344677888766655555
Q ss_pred HHHHHHHHHHHhhhhhccccc--CChhHHHHHHHHHhcccccccCchhHHHHHHHHHhhcChhHHHHHHHHHHHHHHHHH
Q 041759 331 MVPGFGIGVVYYGMTLGIENL--GFDIYLGVVFNALLEIPNLASTIPSFFLTFFLIQKWNRKSSLLVLFIISGICSIMAV 408 (525)
Q Consensus 331 ~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~d~~g~~~~~~~~~~~~~~~~~~~~ 408 (525)
++...........++.+.++. +.+........+.... +..+|+++++++.||+++|+.+.++..+..+..++..
T Consensus 242 f~yvg~e~~~~s~l~~y~~~~~~~~~~~~a~~~~~~~~~----~~~vGR~~~~~l~~r~~~~~~l~i~~~~~~~~~ll~~ 317 (410)
T TIGR00885 242 FFYVGVQIMCWTFIIQYAVRLIPGMTAGFAANYNIGAMV----IFFISRFIGTWLISYLAAHKVLMAYAIIGMALCLGSI 317 (410)
T ss_pred HHHHHHHHHHHHHHHHHHhhccCCCCHHHHHHHHHHHHH----HHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHH
Confidence 554444333333344444433 3333333323333223 4458999999999999999999888888888877777
Q ss_pred HhccccccchhHHHHHHHHHHHHHHHHHHHHHhhhccccCcchhhhhhHHHHHHHHHHHHHHHHHHhh
Q 041759 409 VANDISNAGKRMRIGLELASLFSAYIAYTVIFIYAIELFPTCVRNSATSIMRLAIIFAAIFSSVLVAA 476 (525)
Q Consensus 409 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~r~~~~~~~~~~~~~g~~~~p~i~~~ 476 (525)
..+.. .......+.+++.+..+|..++...+..+++.+..+.++... .+|+.+.|.+.|.
T Consensus 318 ~~~~~------~~~~~l~~~glf~s~~fp~i~sl~~~~~g~~~~~~s~~l~~~--~~Gga~~p~l~G~ 377 (410)
T TIGR00885 318 FAGGH------VGLYCLTLCSAFMSLMFPTIYGIALKGLGQDTKYGAAGLVMA--IIGGGIVPPLQGF 377 (410)
T ss_pred HcCCh------HHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhhhhHHHHHHH--HhccchHHHHHHH
Confidence 65443 335666677788889999999999999998765445554444 3899999999985
No 70
>PRK11010 ampG muropeptide transporter; Validated
Probab=99.96 E-value=2.6e-27 Score=238.84 Aligned_cols=356 Identities=13% Similarity=0.087 Sum_probs=249.5
Q ss_pred ccceeeccccccchhhhhhhHHHHHHHHHHHhHHhhHhcccccC-----CchHH-HHHHHHHHHHHHHHHHhh---hhHH
Q 041759 100 ALTIISEWGLECSSAFIKGLPAASHFTGCLLGIVFLATLADSSL-----GRKNL-LFLSCLTMSVATSLTIFS---NNLW 170 (525)
Q Consensus 100 ~~~i~~~~~~~~~s~~~~g~~~s~~~lg~~~~~~~~G~l~dr~~-----Grk~~-~~~~~~~~~i~~~~~~~~---~~~~ 170 (525)
+|...++.|. +..++|.+ +.....+ ++.+++|+++|| + |||+. ++.+.++.+++..+.++. ++++
T Consensus 35 l~~~l~~~g~---~~~~ig~~-~~~~~~~-~~~~l~gpl~Dr-~~~~~~Grrr~~ll~~~i~~~~~~~~~a~~~~~~~l~ 108 (491)
T PRK11010 35 LQAWMTVENI---DLKTIGFF-SLVGQAY-VFKFLWSPLMDR-YTPPFLGRRRGWLLATQLLLLVAIAAMGFLEPGTQLR 108 (491)
T ss_pred HHHHHHhCCC---CHHHHHHH-HHHHHHH-HHHHHHHHHHHc-ccccCCCCchHHHHHHHHHHHHHHHHHHHcCCcchHH
Confidence 7888888899 88889986 4444444 588999999999 9 99885 667777777777777775 4788
Q ss_pred HHHHHHHHHhhcccchhhhhheeeEeeecCcchhhHHhHHHHHHHHHHHHHHHHHH-hcc-CCchHHHHHHHHHHHHHHH
Q 041759 171 IYSLLRFFSGISRATIGTCTIVLLTEKVGTEWRGLVGILDSFFFTIGTLTLPAIAY-TNR-SSSWTIIYLWTSIPTLVYS 248 (525)
Q Consensus 171 ~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~l~~~l~~-~~~-~~~wr~~f~~~~~~~~~~~ 248 (525)
.+.+.|++.|++.+...+...+++.|++|+++|+++.++...+..+|.++++.++. +.+ ..|||..|++.+++.++..
T Consensus 109 ~l~~~~~l~~~~~a~~~i~~~a~~~~~~~~~~rg~~~~i~~~g~~lG~llg~~l~~~l~~~~~GWr~~f~i~a~l~ll~~ 188 (491)
T PRK11010 109 WLAALAVVIAFCSASQDIVFDAWKTDVLPAEERGAGAAISVLGYRLAMLVSGGLALWLADRYLGWQGMYWLMAALLIPCI 188 (491)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhcChhhhHHHHHHHHHHHHHHHHHHHHHHHHHHhcccCHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999988844 444 3699999999998877766
Q ss_pred hHhheeecCCchHhhhcCCHHHHHHHHHhhCCCcCCccchhhhhhhccCCCCcccccccccchhhhhhhhcchhHHHHHH
Q 041759 249 GLLYIFVSESPRWLFMQGRQEEAVEVIKSLSPIKDSNQLSLSLVSAVSFGHEPAASSKESSFLSSIRELFVRRWALERTL 328 (525)
Q Consensus 249 ~~~~~~lpesp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~ 328 (525)
+..+++||+++.. +++++.++ + ...+++++++++..+....
T Consensus 189 -l~~~~~~e~~~~~---~~~~~~~~---~--------------------------------~~~~l~~~~~~~~~~~~ll 229 (491)
T PRK11010 189 -IATLLAPEPTDTI---PVPKTLEQ---A--------------------------------VVAPLRDFFGRNNAWLILL 229 (491)
T ss_pred -HHHHhcCCCcccc---ccccchhh---h--------------------------------HHHHHHHHHcCcCHHHHHH
Confidence 4444578864210 00000000 0 0024566777776555444
Q ss_pred HHHHHHHHHHHH-HhhhhhcccccCChhHHHHHHHH-HhcccccccCchhHHHHHHHHHhhcChhHHHHHHHHHHHHHHH
Q 041759 329 ALMVPGFGIGVV-YYGMTLGIENLGFDIYLGVVFNA-LLEIPNLASTIPSFFLTFFLIQKWNRKSSLLVLFIISGICSIM 406 (525)
Q Consensus 329 ~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~l~d~~g~~~~~~~~~~~~~~~~~~ 406 (525)
..++........ .+..+++.++.|++....+.... ...+ +.++|.+++|++.||+++|+.+.++.++.++..+.
T Consensus 230 ~~~l~~~~~~~~~~~~~~~l~~~~G~s~~~~g~~~~~~g~i----~~iiG~ll~G~L~dr~g~~~~l~i~~~l~~l~~l~ 305 (491)
T PRK11010 230 LIVLYKLGDAFAMSLTTTFLIRGVGFDAGEVGLVNKTLGLL----ATIVGALYGGILMQRLSLFRALMIFGILQGVSNAG 305 (491)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHH----HHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHH
Confidence 444333333332 34445555668888888777653 4344 66699999999999999988877766655554433
Q ss_pred HHHhccccccchhHHHHHHHHHHHHHHHHHHHHHhhhccccCcchhhhhhHHHHHHHHHHHHHHHHHHhh--ccCchhHH
Q 041759 407 AVVANDISNAGKRMRIGLELASLFSAYIAYTVIFIYAIELFPTCVRNSATSIMRLAIIFAAIFSSVLVAA--GSNNEFVS 484 (525)
Q Consensus 407 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~r~~~~~~~~~~~~~g~~~~p~i~~~--~~~~~~~~ 484 (525)
+...... ..+........++..++.+...+..+++..+..+++.+++..++.+....+|..+++.+.|. +..++...
T Consensus 306 ~~~l~~~-~~~~~~l~~~~~l~~~~~g~~~~~~~a~~~~l~~~~~~~t~~gl~~s~~~lg~~~~~~~~G~l~~~~G~~~~ 384 (491)
T PRK11010 306 YWLLSIT-DKNLYSMGAAVFFENLCGGMGTAAFVALLMTLCNKSFSATQFALLSALSAVGRVYVGPVAGWFVEAHGWPTF 384 (491)
T ss_pred HHHHHhc-cccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHhChHHH
Confidence 3221111 01222333344444444555556677888888999899999999999999998877777774 33456677
Q ss_pred HHHHHHHHHHHHHHHHhccCC
Q 041759 485 YGVFGLVIICCGFFVICLPET 505 (525)
Q Consensus 485 ~~~~~~~~~~~~~~~~~~~~~ 505 (525)
|.+.+++.+++.+.....+++
T Consensus 385 f~~~~~~~l~~l~~~~~~~~~ 405 (491)
T PRK11010 385 YLFSVAAAVPGLLLLLVCRQT 405 (491)
T ss_pred HHHHHHHHHHHHHHHHHHHhc
Confidence 777777777776666555543
No 71
>COG2223 NarK Nitrate/nitrite transporter [Inorganic ion transport and metabolism]
Probab=99.96 E-value=6e-28 Score=223.54 Aligned_cols=353 Identities=14% Similarity=0.094 Sum_probs=274.9
Q ss_pred ccceeeccccccchhhhhhhHHHHHHHHHHHhHHhhHhcccccCCchHHHHHHHHHHHHHHHHHHhhh---hHHHHHHHH
Q 041759 100 ALTIISEWGLECSSAFIKGLPAASHFTGCLLGIVFLATLADSSLGRKNLLFLSCLTMSVATSLTIFSN---NLWIYSLLR 176 (525)
Q Consensus 100 ~~~i~~~~~~~~~s~~~~g~~~s~~~lg~~~~~~~~G~l~dr~~Grk~~~~~~~~~~~i~~~~~~~~~---~~~~l~~~r 176 (525)
.+.+++|+|+ |+.|.+++.++..+...+..++.|.+.|| ||.|++..++.++..+-.+..+++. ++|++++.+
T Consensus 37 ~~~i~~~~~L---S~~q~~ll~aiPil~GallRl~~g~l~dr-fGgR~~~~~s~~l~~IP~~~~~~a~~~~~~~~ll~~g 112 (417)
T COG2223 37 GVFIKSDFGL---SEGQKGLLVAIPILVGALLRLPYGFLTDR-FGGRKWTILSMLLLLIPCLGLAFAVTYPSTWQLLVIG 112 (417)
T ss_pred HhhhccccCC---CHHHHHHHHHHHHHHhHHHHHHHHhhhcc-cCchHHHHHHHHHHHHHHHHHHHHccCCchHHHHHHH
Confidence 7788899999 99999999999999999999999999999 9999999999999999999999985 455999999
Q ss_pred HHHhhcccchhhhhheeeEeeecCcchhhHHhHHHHHHHHHHHHHHHHHHh-ccCCc---hHHHHHHHHHHHHHHHhHhh
Q 041759 177 FFSGISRATIGTCTIVLLTEKVGTEWRGLVGILDSFFFTIGTLTLPAIAYT-NRSSS---WTIIYLWTSIPTLVYSGLLY 252 (525)
Q Consensus 177 ~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~l~~~l~~~-~~~~~---wr~~f~~~~~~~~~~~~~~~ 252 (525)
++.|++.+ .+.+...+++.++||+++|.++++.. ..++|..+..+++-. +...+ ||....+..+..++..+..+
T Consensus 113 ll~G~~Ga-sFav~m~~~s~~fP~~~qG~AlGI~g-~GN~G~av~q~~~P~v~~~~g~~~w~~~~~i~~~~l~v~~v~~~ 190 (417)
T COG2223 113 LLLGLAGA-SFAVGMPNASFFFPKEKQGLALGIAG-AGNLGVAVAQLVAPLVAVAFGFLAWRNVAGIYVVALAIAAVLAW 190 (417)
T ss_pred HHHhcccc-eehcccccccccCChhhhhHHHHHhc-cccccHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999977 78899999999999999999999999 888888776666432 23346 99999999988888887778
Q ss_pred eeecCCchHhhhcCCHHHHHHHHHhhCCCcCCccchhhhhhhccCCCCcccccccccchhhhhhhhcchhHHHHHHHHHH
Q 041759 253 IFVSESPRWLFMQGRQEEAVEVIKSLSPIKDSNQLSLSLVSAVSFGHEPAASSKESSFLSSIRELFVRRWALERTLALMV 332 (525)
Q Consensus 253 ~~lpesp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~ 332 (525)
+...|.|......++.. ...++.++++++.|...+..+.
T Consensus 191 ~~~~d~p~~r~~~~~~~-----------------------------------------~~~~~~v~~~~~~W~lsllY~~ 229 (417)
T COG2223 191 LGMNDVPEHRASVKPQL-----------------------------------------PAQLKAVFSNKDTWLLSLLYFA 229 (417)
T ss_pred HHhCCChhhhccccccc-----------------------------------------hhHHHHHhcCcchHHHHHHHHH
Confidence 87777663210000000 0246677888887776666555
Q ss_pred HHHHH-HHHHhhhhhcccccCChhHHHHHHHHHhcccccccCchhHHHHHHHHHhhcChhHHHHHHHHHHHHHHHHHHhc
Q 041759 333 PGFGI-GVVYYGMTLGIENLGFDIYLGVVFNALLEIPNLASTIPSFFLTFFLIQKWNRKSSLLVLFIISGICSIMAVVAN 411 (525)
Q Consensus 333 ~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~d~~g~~~~~~~~~~~~~~~~~~~~~~~ 411 (525)
..-+. .+..+...++..+++.+...++.......+ .+.+.++++|+++||+|.++++.+.+..++++..+.....
T Consensus 230 tFG~Fvgfs~~l~~~~~~~fg~~~~~Ag~~a~~f~~----~g~l~Rp~GG~LsDR~Gg~rv~~~~f~~~~~~~~~l~~~~ 305 (417)
T COG2223 230 TFGGFVGFSAYLPMYLVTQFGLSPVTAGLIAFLFPL----IGALARPLGGWLSDRIGGRRVTLAVFVGMALAAALLSLFL 305 (417)
T ss_pred HHHHHHHHHHHHHHHHHHhcCCChhhHHHHHHHHHH----HHHHHHhccchhhhhccchhHHHHHHHHHHHHHHHHHccc
Confidence 54443 344454455666789998888777777666 5558899999999999999999999999999988888775
Q ss_pred cccc--cchhHHHHHHHHHHHHHHHHHHHHHhhhccccCcchhhhhhHHHHHHHHHHHHHHHHHHhh---ccCchhHHHH
Q 041759 412 DISN--AGKRMRIGLELASLFSAYIAYTVIFIYAIELFPTCVRNSATSIMRLAIIFAAIFSSVLVAA---GSNNEFVSYG 486 (525)
Q Consensus 412 ~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~r~~~~~~~~~~~~~g~~~~p~i~~~---~~~~~~~~~~ 486 (525)
.... .+....+...+....+.+......+-+++..+|++ .|.+.|+....+.+|++.-|...+. ....+...|+
T Consensus 306 ~~~~~~~~~~~~~~~~l~l~~~~G~GnGsvfk~Ip~if~~~-~G~v~G~vga~G~lGGf~lp~~~g~~~~~tg~~~~~f~ 384 (417)
T COG2223 306 TGFGHGGSFVVFVAVFLALFVFAGLGNGSVFKMIPVIFPKE-TGAVTGIVGAIGGLGGFFLPLAFGVSLDLTGSYTGAFM 384 (417)
T ss_pred cccccCcchHHHHHHHHHHHHHhccCcchheeechHHHHhh-hhHHHHHHHHhccccccchhHHHHHHHHhcccHHHHHH
Confidence 3211 22334555566666777777778888888888875 5899999999999999999999884 2234677788
Q ss_pred HHHHHHHHHHHHHHhccC
Q 041759 487 VFGLVIICCGFFVICLPE 504 (525)
Q Consensus 487 ~~~~~~~~~~~~~~~~~~ 504 (525)
++..+.+++.+..+....
T Consensus 385 ~~~~~~~~a~v~~~~~y~ 402 (417)
T COG2223 385 LLLAFYLVALVLTWALYA 402 (417)
T ss_pred HHHHHHHHHHHHHHHHHH
Confidence 888887777776655533
No 72
>TIGR00886 2A0108 nitrite extrusion protein (nitrite facilitator).
Probab=99.96 E-value=2.8e-28 Score=238.86 Aligned_cols=327 Identities=15% Similarity=0.084 Sum_probs=227.1
Q ss_pred ccc-eeeccccccchhhhhhhHHHHHHHHHHHhHHhhHhcccccCCchHHHHHHHHHHHHHHHHHHhhh-hHHHHHHHHH
Q 041759 100 ALT-IISEWGLECSSAFIKGLPAASHFTGCLLGIVFLATLADSSLGRKNLLFLSCLTMSVATSLTIFSN-NLWIYSLLRF 177 (525)
Q Consensus 100 ~~~-i~~~~~~~~~s~~~~g~~~s~~~lg~~~~~~~~G~l~dr~~Grk~~~~~~~~~~~i~~~~~~~~~-~~~~l~~~r~ 177 (525)
.|. +++++|+ ++.+.+++.+++.+++.+++++.|+++|| +|||+.++++.++.+++.+++++++ +++.+++.|+
T Consensus 24 ~~~~~~~~~~~---s~~~~~~~~~~~~~~~~~~~~~~g~l~dr-~g~r~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~ 99 (366)
T TIGR00886 24 AVQMIKDDLGL---STAQLGNLVAVPVLAGAVLRIILGFLVDK-FGPRYTTTLSLLLLAIPCLWAGLAVQSYSVLLLLRL 99 (366)
T ss_pred hhHHHHHHhCC---CHHHhhHhhHHHHHHHHHHHHHHHHHHHH-hCchHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHH
Confidence 785 9999999 99999999999999999999999999999 9999999999999999999999999 9999999999
Q ss_pred HHhhcccchhhhhheeeEeeecCcchhhHHhHHHHHHHHHHHHHHHHHH-hcc----------CCchHHHH-HHHHHHHH
Q 041759 178 FSGISRATIGTCTIVLLTEKVGTEWRGLVGILDSFFFTIGTLTLPAIAY-TNR----------SSSWTIIY-LWTSIPTL 245 (525)
Q Consensus 178 l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~l~~~l~~-~~~----------~~~wr~~f-~~~~~~~~ 245 (525)
++|++.+. .+....++.|++|+++|+++.++...+.++|..+++.++. +.. ..+||+.| +..++..+
T Consensus 100 ~~g~~~~~-~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~i~~~l~~~~~~~~~~~~~~~w~~~~~~~~~~~~~ 178 (366)
T TIGR00886 100 FIGIAGGS-FASCMPWISFFFPKKIQGTALGLAAGWGNMGGGVAQFVMPPIIGSLIFGAGLPAHLAWGWAFVIVPAGILL 178 (366)
T ss_pred HHHHhchh-hHhHHHHHHHhcCHhhhhHHHHHHHHHhHHHHHHHHHHHHHHHHHHHhcccccccccccchhHHHHHHHHH
Confidence 99999664 5667888999999999999999998777777776665532 211 34899999 44455555
Q ss_pred HHHhHhheeecCCchHhhhcCCHHHHHHHHHhhCCCcCCccchhhhhhhccCCCCcccccccccchhhhhhhhcchhHHH
Q 041759 246 VYSGLLYIFVSESPRWLFMQGRQEEAVEVIKSLSPIKDSNQLSLSLVSAVSFGHEPAASSKESSFLSSIRELFVRRWALE 325 (525)
Q Consensus 246 ~~~~~~~~~lpesp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~ 325 (525)
+..++...+.+|+|+. +++++ +. + . .+.. ...+++ .....++.+++|+++.
T Consensus 179 ~~~~~~~~~~~~~~~~----~~~~~-~~---~--~-~~~~-------------~~~~~~-----~~~~~~~~~~~~~~~~ 229 (366)
T TIGR00886 179 LPALLIFFVGADTPPG----KPATG-KL---S--F-KGAR-------------WSVGTG-----ALGDQLKVFRDRHTWI 229 (366)
T ss_pred HHHHHHHHhcccCCcc----cccch-hc---c--c-cccc-------------ccccch-----hHHHHHHHHhccchhh
Confidence 5443555566776531 00000 00 0 0 0000 000000 0024556777777665
Q ss_pred HHHHHHHHHHHHHHHHhhhhhcc-cccCChhHHHHHHHHHhcccccccCchhHHHHHHHHHhhcChhHHHHHHHHHHHHH
Q 041759 326 RTLALMVPGFGIGVVYYGMTLGI-ENLGFDIYLGVVFNALLEIPNLASTIPSFFLTFFLIQKWNRKSSLLVLFIISGICS 404 (525)
Q Consensus 326 ~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~d~~g~~~~~~~~~~~~~~~~ 404 (525)
..+..+.............+.+. +.+|.+....+.......+ ..+++.++.+++.||+|+|+.+..+......+.
T Consensus 230 ~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~----~~~~~~~~~g~l~~r~g~~~~~~~~~~~~~~~~ 305 (366)
T TIGR00886 230 LALLYSVTFGSFLGVSSIFAMFFKDQFGLSKVTAGAYASLGGL----LGSLARPLGGAISDRLGGARKLLMSFLGVAMGA 305 (366)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHcCCcHHHHHHHHHHHHH----HHHHHhhccchHHHhhccchhHHHHHHHHHHHH
Confidence 55444443333333333344444 4468887777766666665 666889999999999999888877776666665
Q ss_pred HHHHHhccccccchhHHHHHHHHHHHHHHHHHHHHHhhhccccCcchhhhhhHHHHHHHHHH
Q 041759 405 IMAVVANDISNAGKRMRIGLELASLFSAYIAYTVIFIYAIELFPTCVRNSATSIMRLAIIFA 466 (525)
Q Consensus 405 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~r~~~~~~~~~~~~~g 466 (525)
.++...... +.+.....+...+..++.+...+..+....+..| +++|++.|+.+....+|
T Consensus 306 ~~~~~~~~~-~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~-~~~g~~~g~~~~~~~~g 365 (366)
T TIGR00886 306 FLVVLGLVS-PLSLAVFIVLFVALFFFSGAGNGSTFALVPHIFR-RATGAVSGLVGAIGNLG 365 (366)
T ss_pred HHHHhcCCC-cchHHHHHHHHHHHHHHhccccchhhhcchhhch-hhcccHHHHHHHhccCC
Confidence 555443221 0013334444555556666666777888888887 57899999988877654
No 73
>PRK15011 sugar efflux transporter B; Provisional
Probab=99.96 E-value=2.3e-26 Score=226.84 Aligned_cols=345 Identities=16% Similarity=0.166 Sum_probs=227.2
Q ss_pred cceeeccccccchhhhhhhHHHHHHH-HHHHhHHhhHhcccccCCchHHH-HHHHHHHHHHHHHHHhhhhHHHHHHHHHH
Q 041759 101 LTIISEWGLECSSAFIKGLPAASHFT-GCLLGIVFLATLADSSLGRKNLL-FLSCLTMSVATSLTIFSNNLWIYSLLRFF 178 (525)
Q Consensus 101 ~~i~~~~~~~~~s~~~~g~~~s~~~l-g~~~~~~~~G~l~dr~~Grk~~~-~~~~~~~~i~~~~~~~~~~~~~l~~~r~l 178 (525)
+.+++++|+ +..+.|++.+...+ +..++.++.|+ +|| +||||.+ ..+.++.+++.++.+++++++.+++.+.+
T Consensus 40 ~~l~~~~~~---s~~~~g~~~~~~~~~~~~~~~~~~~~-~dr-~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~ 114 (393)
T PRK15011 40 IFLTDEVHA---RPAMVGFFFTGSAVIGILVSQFLAGR-SDK-RGDRKSLIVFCCLLGVLACTLFAWNRNYFVLLFVGVF 114 (393)
T ss_pred HHHHhhcCC---CHHHHHHHHHHHHHHHHHHHHHHHHH-Hhc-ccchhHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHH
Confidence 346889999 99999999876544 66666666666 999 9999875 45666667888888899999988766655
Q ss_pred HhhcccchhhhhheeeEeeecCcch--hhHHhHHHHHHHHHHHHHHHHHHh-ccCCchHHHHHHHHHHHHHHHhHhheee
Q 041759 179 SGISRATIGTCTIVLLTEKVGTEWR--GLVGILDSFFFTIGTLTLPAIAYT-NRSSSWTIIYLWTSIPTLVYSGLLYIFV 255 (525)
Q Consensus 179 ~G~~~~~~~~~~~~~i~~~~~~~~r--~~~~~~~~~~~~~G~~l~~~l~~~-~~~~~wr~~f~~~~~~~~~~~~~~~~~l 255 (525)
.|...+...|....++.|+.++++| +...++.+.+.++|.+++|+++.. .+..|||..|++.++..++..++.++++
T Consensus 115 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg~~~g~~i~~~l~~~~gw~~~f~~~~~~~~~~~~~~~~~~ 194 (393)
T PRK15011 115 LSSFGSTANPQMFALAREHADKTGREAVMFSSFLRAQVSLAWVIGPPLAYALAMGFSFTVMYLSAAVAFIVCGVMVWLFL 194 (393)
T ss_pred HHHHHHhhHHHHHHHHHHHhhhccchHHHHHHHHHHHHHHHHHHhhHHHHHHHHhcChHHHHHHHHHHHHHHHHHHHhhc
Confidence 5555556778888888887776655 344578889999999999999554 4578999999999988887775667778
Q ss_pred cCCchHhhhcCCHHHHHHHHHhhCCCcCCccchhhhhhhccCCCCcccccccccchhhhhhhhcchhHHHHHHHHHHHHH
Q 041759 256 SESPRWLFMQGRQEEAVEVIKSLSPIKDSNQLSLSLVSAVSFGHEPAASSKESSFLSSIRELFVRRWALERTLALMVPGF 335 (525)
Q Consensus 256 pesp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~ 335 (525)
||.++. ++.+ + . +. ...++ +.+..+..+......+.
T Consensus 195 ~~~~~~----~~~~----------~-~--------------~~-------------~~~~~--~~~~~~~~~~~~~~~~~ 230 (393)
T PRK15011 195 PSMRKE----LPLA----------T-G--------------TL-------------EAPRR--NRRDTLLLFVICTLMWG 230 (393)
T ss_pred CccCCC----Cccc----------c-c--------------cc-------------ccccc--ccccHHHHHHHHHHHHH
Confidence 876420 0000 0 0 00 00000 01111222222222222
Q ss_pred HHHHHHhhhhhcc-cccCChhHHHHHHHHHhcccccccCchhHHHHHHHHHhhcChhHHHHHHHHHHHHHHHHHHhcccc
Q 041759 336 GIGVVYYGMTLGI-ENLGFDIYLGVVFNALLEIPNLASTIPSFFLTFFLIQKWNRKSSLLVLFIISGICSIMAVVANDIS 414 (525)
Q Consensus 336 ~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~d~~g~~~~~~~~~~~~~~~~~~~~~~~~~~ 414 (525)
.........|.+. ++++.+....+.+.+...+ +.+++.++.|++.||++||+.+..+.....+......... .
T Consensus 231 ~~~~~~~~~p~~l~~~~~~~~~~~g~~~~~~~~----~~i~~~~~~G~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~-~- 304 (393)
T PRK15011 231 TNSLYIINMPLFIINELHLPEKLAGVMMGTAAG----LEIPTMLIAGYFAKRLGKRFLMRVAAVAGVCFYAGMLMAH-S- 304 (393)
T ss_pred HHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHH----HHHHHHHHHHHHHHHhChHHHHHHHHHHHHHHHHHHHHHh-h-
Confidence 2222223345444 4578887777666655444 5567889999999999999987776655554443332222 2
Q ss_pred ccchhHHHHHHHHHHHHHHHHHHHHHhhhccccCcchhhhhhHHHHHHHHHHHHHHHHHHhh--ccCchhHHHHHHHHHH
Q 041759 415 NAGKRMRIGLELASLFSAYIAYTVIFIYAIELFPTCVRNSATSIMRLAIIFAAIFSSVLVAA--GSNNEFVSYGVFGLVI 492 (525)
Q Consensus 415 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~r~~~~~~~~~~~~~g~~~~p~i~~~--~~~~~~~~~~~~~~~~ 492 (525)
.....+..++.+++.+...+....+..|..|+ .++++.++.+....+|..++|.+.|. +..++...+.+.+++.
T Consensus 305 ---~~~~l~~~~l~~~~~g~~~~~~~~~~~~~~p~-~~g~~~~~~~~~~~lg~~~g~~l~G~i~~~~g~~~~~~~~~~~~ 380 (393)
T PRK15011 305 ---PAILLGLQLLNAIYIGILGGIGMLYFQDLMPG-QAGSATTLYTNTSRVGWIIAGSLAGIVAEIWNYHAVFWFALVMI 380 (393)
T ss_pred ---HHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCC-CcchHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHH
Confidence 22334444445555555556666777888886 48999999998889999999999985 3235566666666666
Q ss_pred HHHHHHHHhccC
Q 041759 493 ICCGFFVICLPE 504 (525)
Q Consensus 493 ~~~~~~~~~~~~ 504 (525)
+++.+..+..||
T Consensus 381 ~~~~~~~~~~~~ 392 (393)
T PRK15011 381 IATLFCLLRIKD 392 (393)
T ss_pred HHHHHHHHhhcC
Confidence 666666665543
No 74
>TIGR00902 2A0127 phenyl proprionate permease family protein. This family of proteins is involved in the uptake of 3-phenylpropionic acid. This uptake mechanism is for the metabolism of phenylpropanoid compounds and plays an important role in the natural degradative cycle of these aromatic molecules.
Probab=99.96 E-value=1e-26 Score=228.33 Aligned_cols=340 Identities=10% Similarity=-0.011 Sum_probs=254.0
Q ss_pred ccceeeccccccchhhhhhhHHHHHHHHHHHhHHhhHhcccccCCchHHH----HHHHHHHHHHHHHHHhhhhHHHHHHH
Q 041759 100 ALTIISEWGLECSSAFIKGLPAASHFTGCLLGIVFLATLADSSLGRKNLL----FLSCLTMSVATSLTIFSNNLWIYSLL 175 (525)
Q Consensus 100 ~~~i~~~~~~~~~s~~~~g~~~s~~~lg~~~~~~~~G~l~dr~~Grk~~~----~~~~~~~~i~~~~~~~~~~~~~l~~~ 175 (525)
+|.+.+++|+ +..++|++.+++.++..++++++|+++|| +|||+.. ..+..+..+ ....++++++.+++.
T Consensus 27 l~~~l~~~g~---s~~~ig~~~s~~~~~~~~~~~~~g~l~d~-~~~~~~~~~~~~~~~~l~~~--~~~~~~~~~~~l~~~ 100 (382)
T TIGR00902 27 FPAWLKGIGL---GEEMIGLLIGAALIARFAGGLFFAPLIKD-ANHIIIALRLLALASAIFAA--AFSAGAHNAWLLFIA 100 (382)
T ss_pred HHHHHHHcCC---CHHHHHHHHHHHHHHHHHHHHHHHHHHHh-cCcHHHHHHHHHHHHHHHHH--HHHHhhhhHHHHHHH
Confidence 7888999999 99999999999999999999999999999 9985433 222222222 244467899999999
Q ss_pred HHHHhhcccchhhhhheeeEeeecCcchhhHHhHHHHHHHHHHHHHHHH-HHhccCCchHHHHHHHHHHHHHHHhHhhee
Q 041759 176 RFFSGISRATIGTCTIVLLTEKVGTEWRGLVGILDSFFFTIGTLTLPAI-AYTNRSSSWTIIYLWTSIPTLVYSGLLYIF 254 (525)
Q Consensus 176 r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~l~~~l-~~~~~~~~wr~~f~~~~~~~~~~~~~~~~~ 254 (525)
|+++|.+.+...|...++..++ +++|++..+....+.++|.+++|.+ +.+.+.+|||..|++.++..++.. +.. .
T Consensus 101 ~~l~~~~~~~~~p~~~al~~~~--~~~~~~~~g~~~~~~slG~~~g~~l~g~l~~~~g~~~~f~~~~~~~~~~~-~~~-~ 176 (382)
T TIGR00902 101 IGLFALFFSAGMPIGDALANTW--QKQFGLDYGKVRLIGSAAFIIGSALFGGLIGMFDEQNILAILTAGLAFML-IGF-L 176 (382)
T ss_pred HHHHHHHHccchhHHHHHHHHH--HHHcCCCccHHHHHHHHHHHHHHHHHHHHHHHcChhHHHHHHHHHHHHHH-HHH-H
Confidence 9999999988888888887654 4778999999999999999999987 666677899999988766533333 333 2
Q ss_pred ecCCchHhhhcCCHHHHHHHHHhhCCCcCCccchhhhhhhccCCCCcccccccccchhhhhhhhcchhHHHHHHHHHHHH
Q 041759 255 VSESPRWLFMQGRQEEAVEVIKSLSPIKDSNQLSLSLVSAVSFGHEPAASSKESSFLSSIRELFVRRWALERTLALMVPG 334 (525)
Q Consensus 255 lpesp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~ 334 (525)
++|+++ ++++++ ++ +. ++ ..+.++++|+|+++...+..++..
T Consensus 177 ~~~~~~----~~~~~~------------~~------------~~-----~~-----~~~~~~~l~~~~~~~~l~~~~l~~ 218 (382)
T TIGR00902 177 IKPTIP----PKDAIP------------ED------------ES-----QG-----DSAFIALLKNPMNLRFLAAVCLIQ 218 (382)
T ss_pred cCCCCC----CCcccc------------cc------------cc-----cc-----chhHHHHHcChHHHHHHHHHHHHH
Confidence 333210 000000 00 00 00 035678899998877777666666
Q ss_pred HHHHHHHhhhhhcccccCChhHHHHHHHHHhcccccccCchhHHHHHHHHHhhcChhHHHHHHHHHHHHHHHHHHhcccc
Q 041759 335 FGIGVVYYGMTLGIENLGFDIYLGVVFNALLEIPNLASTIPSFFLTFFLIQKWNRKSSLLVLFIISGICSIMAVVANDIS 414 (525)
Q Consensus 335 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~d~~g~~~~~~~~~~~~~~~~~~~~~~~~~~ 414 (525)
......+...+.+.++.|.+....+...+...+ +.+++.++.+++.||+|+|+.+.++.++..+....+.+.++.
T Consensus 219 ~~~~~~~~~~~~~l~~~g~s~~~~g~l~~~~~~----~~i~~~~~~~~l~~r~g~~~~l~~~~~~~~~~~~~~~~~~~~- 293 (382)
T TIGR00902 219 GAHAAYYGFSAIYWQAAGISASATGLLWGIGVL----AEIIIFAFSNKLFQNCSARDLLLISAIACVGRWAIIGAIEAF- 293 (382)
T ss_pred HHHHHHHHHHHHHHHHCCCCHhHHHHHHHHHHH----HHHHHHHHhHHHHhhCCHHHHHHHHHHHHHHHHHHHHhHhhH-
Confidence 665555555566677789998888877776666 777889999999999999999999999999988877665443
Q ss_pred ccchhHHHHHHHHHHHHHHHHHHHHHhhhccccCcchhhhhhHHHHH-HHHHHHHHHHHHHhh--ccCchhHHHHHHHHH
Q 041759 415 NAGKRMRIGLELASLFSAYIAYTVIFIYAIELFPTCVRNSATSIMRL-AIIFAAIFSSVLVAA--GSNNEFVSYGVFGLV 491 (525)
Q Consensus 415 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~r~~~~~~~~~-~~~~g~~~~p~i~~~--~~~~~~~~~~~~~~~ 491 (525)
+..+...++.++..+...+....++.+. |++.+++++++.+. ...+|..++|.+.|. +..+ ...|...+++
T Consensus 294 ----~~~~~~q~l~g~~~~~~~~~~~~~i~~~-~~~~~~~~q~~~~~~~~g~g~~~g~~~~G~l~~~~g-~~~~~~~~~~ 367 (382)
T TIGR00902 294 ----PLIFLLQILHCGTFAVCHLAAMRYIAAQ-PGSEIAKLQALYNALAMGGLIAIFTAFAGFIYPTLG-AGTFVFMAII 367 (382)
T ss_pred ----HHHHHHHHHHHHHHHHHHHHHHHHHHhC-CHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcc-HHHHHHHHHH
Confidence 4566778888999999999999999988 99899999999864 457889999999985 2223 3556666666
Q ss_pred HHHHHHH
Q 041759 492 IICCGFF 498 (525)
Q Consensus 492 ~~~~~~~ 498 (525)
.+++.++
T Consensus 368 ~~~~~~~ 374 (382)
T TIGR00902 368 AAAAFFL 374 (382)
T ss_pred HHHHHHH
Confidence 6655444
No 75
>TIGR00896 CynX cyanate transporter. This family of proteins is involved in active transport of cyanate. The cyanate transporter in E.Coli is used to transport cyanate into the cell so it can be metabolized into ammonia and bicarbonate. This process is used to overcome the toxicity of environmental cyanate.
Probab=99.96 E-value=4.6e-27 Score=228.97 Aligned_cols=319 Identities=14% Similarity=0.095 Sum_probs=236.1
Q ss_pred CCccccceeeccccccchhhhhhhHHHHHHHHHHHhHHhhHhcccccCCchHHHHHHHHHHHHHHHHHHhhhhHHHHHHH
Q 041759 96 PTTTALTIISEWGLECSSAFIKGLPAASHFTGCLLGIVFLATLADSSLGRKNLLFLSCLTMSVATSLTIFSNNLWIYSLL 175 (525)
Q Consensus 96 p~~~~~~i~~~~~~~~~s~~~~g~~~s~~~lg~~~~~~~~G~l~dr~~Grk~~~~~~~~~~~i~~~~~~~~~~~~~l~~~ 175 (525)
|. +|.+++++|+ +..+.|++.+++.++..+++++.|+++|| +|||+++.++.++..++.+.. .+++++.+++.
T Consensus 21 ~~--lp~l~~~~~~---s~~~~g~~~s~~~~~~~~~~~~~g~l~dr-~g~r~~~~~~~~~~~~~~~~~-~~~~~~~l~~~ 93 (355)
T TIGR00896 21 PL--LPQIRSALGM---SFSVAGLLTALPVLCFAVLAPLAPWLARR-FGEERSVAAGLLLIAAGILIR-SAPGTALLFAG 93 (355)
T ss_pred cc--HHHHHHHhCC---CHHHHHHHHHHHHHHHHHHHHhHHHHHHH-hCchHHHHHHHHHHHHHHHHH-HhccHHHHHHH
Confidence 55 8999999999 99999999999999999999999999999 999999999999988888877 77899999999
Q ss_pred HHHHhhcccchhhhhheeeEeeecCcchhhHHhHHHHHHHHHHHHHHHHHH-hccCC--chHHHHHHHHHHHHHHHhHhh
Q 041759 176 RFFSGISRATIGTCTIVLLTEKVGTEWRGLVGILDSFFFTIGTLTLPAIAY-TNRSS--SWTIIYLWTSIPTLVYSGLLY 252 (525)
Q Consensus 176 r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~l~~~l~~-~~~~~--~wr~~f~~~~~~~~~~~~~~~ 252 (525)
|++.|++.+...+....++.|+++ ++|++++++.+.+..+|..+++.++. +.... +||+.|.+.++..++.. .
T Consensus 94 ~~~~g~g~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~g~~i~~~~~~~l~~~~~~~w~~~f~~~~~~~~~~~-~-- 169 (355)
T TIGR00896 94 TALIGVGIAIINVLLPSLIKRDFP-QRVGLMTGLYSMALMGGAALAAAATVPLAQHSGGHWQQALAWWALPALLAL-L-- 169 (355)
T ss_pred HHHHHHHHHHHhccchHHHHHhCc-chhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHHHH-H--
Confidence 999999999888888888888886 68999999999999999999988744 33332 49999987776554433 2
Q ss_pred eeecCCchHhhhcCCHHHHHHHHHhhCCCcCCccchhhhhhhccCCCCcccccccccchhhhhhhhcchhHHHHHHHHHH
Q 041759 253 IFVSESPRWLFMQGRQEEAVEVIKSLSPIKDSNQLSLSLVSAVSFGHEPAASSKESSFLSSIRELFVRRWALERTLALMV 332 (525)
Q Consensus 253 ~~lpesp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~ 332 (525)
.++|+.++ +. + .++. . .+ ...++++|+|..+...+...+
T Consensus 170 ~~~~~~~~------~~-----------~-~~~~--------------~----~~-----~~~~~~~~~~~~~~~~~~~~~ 208 (355)
T TIGR00896 170 AWIPQVRR------RV-----------A-ANQT--------------T----TR-----LTPVRIWRSPLAWQVTVFFGL 208 (355)
T ss_pred HHhhhhcc------cc-----------C-CCCC--------------C----CC-----CCCchhhcCHhHHHHHHHHHH
Confidence 22343211 00 0 0000 0 00 133456777776554444443
Q ss_pred HHHHHHHHHhhhhhcccccCChhHHHHHHHHHhcccccccCchhHHHHHHHHHhh-cChhHHHHHHHHHHHHHHHHHHhc
Q 041759 333 PGFGIGVVYYGMTLGIENLGFDIYLGVVFNALLEIPNLASTIPSFFLTFFLIQKW-NRKSSLLVLFIISGICSIMAVVAN 411 (525)
Q Consensus 333 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~d~~-g~~~~~~~~~~~~~~~~~~~~~~~ 411 (525)
...........+|.+.++.|.+....+...+...+ +.+++.++.+++.||+ +||+.+.++..+.+++.+.+.+..
T Consensus 209 ~~~~~~~~~~~lp~~~~~~g~~~~~~g~~~~~~~~----~~i~~~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~ 284 (355)
T TIGR00896 209 QSGLYYSLIGWLPAILISHGASAATAGSLLALMQL----AQAASALLIPALARRVKDQRGIVAVLAVLQLVGLCGLLFAP 284 (355)
T ss_pred HHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHH----HHHHHHHhHHHHHhhhccchHHHHHHHHHHHHHHHHHHHhh
Confidence 33333333444576677788888888888887777 8889999999999999 566666777777777666665544
Q ss_pred cccccchhHHHHHHHHHHHHHHHHHHHHHhhhcccc-CcchhhhhhHHHHHHHHHHHHHHHHHHhh
Q 041759 412 DISNAGKRMRIGLELASLFSAYIAYTVIFIYAIELF-PTCVRNSATSIMRLAIIFAAIFSSVLVAA 476 (525)
Q Consensus 412 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-p~~~r~~~~~~~~~~~~~g~~~~p~i~~~ 476 (525)
.. . . ....++.+++.+..++...+...+.. +++.++...++.+....++..++|.+.|.
T Consensus 285 ~~----~-~-~~~~~l~g~~~g~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~gp~~~G~ 344 (355)
T TIGR00896 285 MH----G-L-WAWALVLGLGQGGAFPLALTLIGLRSRQAAQAAALSAMAQSIGYLLAALGPLFVGV 344 (355)
T ss_pred hh----H-H-HHHHHHHHHhhhhHhHHHHHHHHHhccCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 33 2 1 12345667888887777666665444 45677888999898889999999999885
No 76
>TIGR00889 2A0110 nucleoside transporter. This family of proteins transports nucleosides at a high affinity. The transport mechanism is driven by proton motive force. This family includes nucleoside permease NupG and xanthosine permease from E.Coli.
Probab=99.95 E-value=2.6e-26 Score=227.27 Aligned_cols=354 Identities=10% Similarity=-0.002 Sum_probs=240.4
Q ss_pred ccceeeccccccchhhhhhhHHHHHHHHHHHhHHhhHhcccccCCc-hHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHH
Q 041759 100 ALTIISEWGLECSSAFIKGLPAASHFTGCLLGIVFLATLADSSLGR-KNLLFLSCLTMSVATSLTIFSNNLWIYSLLRFF 178 (525)
Q Consensus 100 ~~~i~~~~~~~~~s~~~~g~~~s~~~lg~~~~~~~~G~l~dr~~Gr-k~~~~~~~~~~~i~~~~~~~~~~~~~l~~~r~l 178 (525)
.+.+++++|+ +..++|++.+++.++..++++++|+++|| +|| |+++.++.++.+++..+..+.++++.+++.|++
T Consensus 26 ~~~l~~~~g~---s~~~iGl~~a~~~~~~~i~~~~~g~l~dr-~g~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 101 (418)
T TIGR00889 26 GSYMSKTLHF---SGAEIGWVYSSTGIAAILMPILVGIIADK-WLSAQKVYAVCHFAGALLLFFAAQVTTPAGMFPVLLA 101 (418)
T ss_pred HHHHHHhcCC---CHHHHHHHHHHHHHHHHHHHHHHHHHHHH-hcccHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHH
Confidence 5677788999 99999999999999999999999999999 965 778888888888888888899999999999999
Q ss_pred Hhhcccchhhhhheee----E----eeecCcchhhHHhHHHHHHHHHHHHHHHHHHhccC-CchHHHHHHHHHHHHHHHh
Q 041759 179 SGISRATIGTCTIVLL----T----EKVGTEWRGLVGILDSFFFTIGTLTLPAIAYTNRS-SSWTIIYLWTSIPTLVYSG 249 (525)
Q Consensus 179 ~G~~~~~~~~~~~~~i----~----~~~~~~~r~~~~~~~~~~~~~G~~l~~~l~~~~~~-~~wr~~f~~~~~~~~~~~~ 249 (525)
.|++.+...+...++. . |......|.|..+ .+|.+++|.++..+.. ..|+ +|++.++..++..
T Consensus 102 ~~~~~~~~~~~~~~l~~~~~~~~g~~~~~~~~~~r~~G------~lG~~ig~~l~g~l~~~~~~~-~f~~~~~~~~~~~- 173 (418)
T TIGR00889 102 NSLAYMPTIALTNSISYANLPQAGLDVVTDFPPIRVMG------TIGFIAAMWAVSLLDIELSNI-QLYITAGSSALLG- 173 (418)
T ss_pred HHHHHccHHHHHHHHHHHHHhhcCCCchhcCCCeeeeh------hHHHHHHHHHHHHhcccchhH-HHHHHHHHHHHHH-
Confidence 9998776666555432 1 2233334445444 3677777777544432 2354 4556666666555
Q ss_pred HhheeecCCchHhhhcCCHHHHHHHHHhhCCCcCCccchhhhhhhccCCCCcccccccccchhhhhhhhcchhHHHHHHH
Q 041759 250 LLYIFVSESPRWLFMQGRQEEAVEVIKSLSPIKDSNQLSLSLVSAVSFGHEPAASSKESSFLSSIRELFVRRWALERTLA 329 (525)
Q Consensus 250 ~~~~~lpesp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~ 329 (525)
+..+++||+|+- ++++++.. ++. . ..+.++++|+|.++..++.
T Consensus 174 ~~~~~~~e~~~~---~~~~~~~~---~~~--------------------------~-----~~~~~~~~k~~~~~~~~~~ 216 (418)
T TIGR00889 174 VFALTLPDIPVA---KSTAKMSI---KVM--------------------------L-----GLDAFILFKNKRMAIFFFF 216 (418)
T ss_pred HHHhcCCCCCCC---ccccccCH---HHH--------------------------h-----hhhHHHHhcCCCeeeHHHH
Confidence 445678886520 00000000 000 0 0134467788876665555
Q ss_pred HHHHHHHHHHHHhhhhhcccccCChh--------HHHHHHHHHhcccccccCchhHHHHHHHHHhhcChhHHHHHHHHHH
Q 041759 330 LMVPGFGIGVVYYGMTLGIENLGFDI--------YLGVVFNALLEIPNLASTIPSFFLTFFLIQKWNRKSSLLVLFIISG 401 (525)
Q Consensus 330 ~~~~~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~~~l~d~~g~~~~~~~~~~~~~ 401 (525)
.++........+...+.+.++.|.++ ...+...++..+ +.+++.++.+++.||+|+|+++.++.++..
T Consensus 217 ~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~g~~~~~~~i----~~i~~~~~~g~l~dr~g~r~~l~~~~~~~~ 292 (418)
T TIGR00889 217 SMLLGAPLQITNIFGNGFLHEFGRNPEFADSFVVKNASIWMSLSQF----SEIFFILTIPFFLKRFGIKKVMLLSLVAWA 292 (418)
T ss_pred HHHHHhHHHHHHHhHHHHHHHhcccccccchhhhhhHHHHHHHHHH----HHHHHHHHHHHHHHHhCcHHHHHHHHHHHH
Confidence 55544433333333354555555332 444555565555 666889999999999999999999999888
Q ss_pred HHHHHHHHhccccccchhHHHHHHHHHHHHHHHHHHHHHhhhccccCcchhhhhhHHHH-HHHHHHHHHHHHHHhh--cc
Q 041759 402 ICSIMAVVANDISNAGKRMRIGLELASLFSAYIAYTVIFIYAIELFPTCVRNSATSIMR-LAIIFAAIFSSVLVAA--GS 478 (525)
Q Consensus 402 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~r~~~~~~~~-~~~~~g~~~~p~i~~~--~~ 478 (525)
+...++...... ...+...++..++.+++.+...+....++.|.+|++.|++++|+.+ ....+|..++|.+.|. +.
T Consensus 293 v~~~l~~~~~~~-~~~~~~l~l~~~l~g~~~~~~~~~~~~~i~~~~p~~~~g~~~g~~~~~~~~lg~~iGp~l~G~l~~~ 371 (418)
T TIGR00889 293 LRFGFFAYGDPE-YFGYALLFLSMIVYGCAFDFFNISGSVFVEKEVPVHIRASAQGLFTLMCNGFGSLLGYILSGVMVEK 371 (418)
T ss_pred HHHHHHHHcCcc-hhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHH
Confidence 877666553221 0012334556677777777777888889999999999999999997 5678899999999984 21
Q ss_pred ------CchhHHHHHHHHHHHHHHHH-HHhccCCCC
Q 041759 479 ------NNEFVSYGVFGLVIICCGFF-VICLPETRG 507 (525)
Q Consensus 479 ------~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~ 507 (525)
.++...|.+.+++.+++.++ .++++|+++
T Consensus 372 ~g~~~~~~~~~~f~~~~~~~~i~~~l~~~~~~~~~~ 407 (418)
T TIGR00889 372 MFAYGTFDWQTMWLFFAGYIAILAVLFMIFFKYSHN 407 (418)
T ss_pred hccccCCchHHHHHHHHHHHHHHHHHHHHHhCCccc
Confidence 23566777777766665544 455566543
No 77
>KOG2504 consensus Monocarboxylate transporter [Carbohydrate transport and metabolism]
Probab=99.95 E-value=4.6e-27 Score=233.56 Aligned_cols=388 Identities=14% Similarity=0.124 Sum_probs=289.6
Q ss_pred cccceeeccccccchhhhhhhHHHHHHHHHHHhHHhhHhcccccCCchHHHHHHHHHHHHHHHHHHhhhhHHHHHHHH-H
Q 041759 99 TALTIISEWGLECSSAFIKGLPAASHFTGCLLGIVFLATLADSSLGRKNLLFLSCLTMSVATSLTIFSNNLWIYSLLR-F 177 (525)
Q Consensus 99 ~~~~i~~~~~~~~~s~~~~g~~~s~~~lg~~~~~~~~G~l~dr~~Grk~~~~~~~~~~~i~~~~~~~~~~~~~l~~~r-~ 177 (525)
+.+.++++|+- +..+++|+.++......+..++.+.+.|| +|.|++.+.|.++..+|.++.+|++++|++++.. +
T Consensus 68 ~~~~~~~~f~~---s~~~~~~i~sl~~~~~~~~gpl~s~l~~r-fg~R~v~i~G~~v~~~g~~lssF~~~i~~l~lt~gv 143 (509)
T KOG2504|consen 68 LFEELMDYFGS---SSSQIAWIGSLLLGVYLLAGPLVSALCNR-FGCRTVMIAGGLVAALGLLLSSFATSLWQLYLTFGV 143 (509)
T ss_pred hHHHHHHHhCC---CccHHHHHHHHHHHHHHHhccHHHHHHhh-cCchHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHH
Confidence 38899999999 89999999999999999999999999999 9999999999999999999999999999888877 8
Q ss_pred HHhhcccchhhhhheeeEeeecCcchhhHHhHHHHHHHHHHHHHHHH-HHhccCCchHHHHHHHHHHHHHHHhHhheeec
Q 041759 178 FSGISRATIGTCTIVLLTEKVGTEWRGLVGILDSFFFTIGTLTLPAI-AYTNRSSSWTIIYLWTSIPTLVYSGLLYIFVS 256 (525)
Q Consensus 178 l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~l~~~l-~~~~~~~~wr~~f~~~~~~~~~~~~~~~~~lp 256 (525)
+.|+|.|+.+.....++..++ +++|+.+.++...+.++|.++-|.+ .++++.+|||+.+++.+.+.+-..+.....-|
T Consensus 144 i~G~G~~~~~~paiviv~~YF-~kkR~lA~Gia~~GsG~G~~~~~~l~~~l~~~~G~r~~~l~~~~~~l~~~~~~~~~rp 222 (509)
T KOG2504|consen 144 IGGLGLGLIYLPAVVILGTYF-EKKRALATGIAVSGTGVGTVVFPPLLKYLLSKYGWRGALLIFGGISLNVLVAGALLRP 222 (509)
T ss_pred HhhccchhhhcchhhhhhhHh-HHHHHHHHhhhhccCCcceeeHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHcCC
Confidence 999999999999999999777 5779999999999999999886655 88889999999999999888777744455445
Q ss_pred CCchHhhhcCCHHHHHHHHHhhCC--------CcCCccchhhhh--hhccCCCCcccccccccchhhh----hhhhcchh
Q 041759 257 ESPRWLFMQGRQEEAVEVIKSLSP--------IKDSNQLSLSLV--SAVSFGHEPAASSKESSFLSSI----RELFVRRW 322 (525)
Q Consensus 257 esp~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~----~~l~~~~~ 322 (525)
.++... + +.++..+....... ....++.+.... ....+.++.+++.+........ .++++++.
T Consensus 223 ~~~~~~--~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~ll~~~~ 299 (509)
T KOG2504|consen 223 LSPPKK--P-NEEKDLRNSAASVESTPKPVELRISERDSGLKKLSLSNLATLKRGPDKWRNSPLQAFLSMLDLSLLKDPK 299 (509)
T ss_pred CCcCCC--c-hhhhhhccccccccccccccccccccCCCCCCcccccchhhhhhCCccccccchhhhhhhhhHHHHcCch
Confidence 443211 1 10000000000000 000000000000 0000000000000000001122 57889988
Q ss_pred HHHHHHHHHHHHHHHHHHHhhhhhcccccCChhHHHHHHHHHhcccccccCchhHHHHHHHHHhhc--ChhHHHHHHHHH
Q 041759 323 ALERTLALMVPGFGIGVVYYGMTLGIENLGFDIYLGVVFNALLEIPNLASTIPSFFLTFFLIQKWN--RKSSLLVLFIIS 400 (525)
Q Consensus 323 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~d~~g--~~~~~~~~~~~~ 400 (525)
++...+...+..++.......++.+.++.+.+......+.+..++ ..++++++.|++.|+.. ++....++.+..
T Consensus 300 fl~~~~~~~~~~~g~~~p~~~l~~~~~~~g~~~~~aa~l~Siigi----~~i~gRi~~G~laD~~~~~~~~~~~~~ll~~ 375 (509)
T KOG2504|consen 300 FLLLALSNLFAYLGFNVPFVYLPSYAKSLGLSSNDAAFLLSIIGV----SDIIGRIILGLLADKPGIRALVLFLLTLLIA 375 (509)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCChhhhHHHHHHHHH----hhhhhhhhhhhhcCccccchHHHHHHHHHHH
Confidence 777777777777777777888888888999999999999999988 88899999999999987 445556666666
Q ss_pred HHHHHHHHHhccccccchhHHHHHHHHHHHHHHHHHHHHHhhhccccCcchhhhhhHHHHHHHHHHHHHHHHHHhhc---
Q 041759 401 GICSIMAVVANDISNAGKRMRIGLELASLFSAYIAYTVIFIYAIELFPTCVRNSATSIMRLAIIFAAIFSSVLVAAG--- 477 (525)
Q Consensus 401 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~r~~~~~~~~~~~~~g~~~~p~i~~~~--- 477 (525)
+++.+.+...... ..++...++.+++.+.........+.|+.+.+.-..+.|+...+..++.+++|.+.|..
T Consensus 376 gl~~~~~p~~~~~-----~~l~~~~~~fG~~~g~~~~l~~~i~~~~~g~~~l~~a~Gl~l~~~gi~~l~gpPiag~~~d~ 450 (509)
T KOG2504|consen 376 GLARLFLPFATTY-----VGLIVFSILFGFCVGSFSSLTPVILVDLVGLEKLSNAYGLLLLFQGIGALVGPPIAGLLYDI 450 (509)
T ss_pred HHHHHHHHHhccH-----HHHHHHHHHHHHHHHHHHHHHHHHHHHHcChhhcchHHHHHHHHhHHHHHcCcccceeeeec
Confidence 6666555554443 57778888888998888888888999999999999999999999999999999999852
Q ss_pred cCchhHHHHHHHHHHHHHHHHHHhcc
Q 041759 478 SNNEFVSYGVFGLVIICCGFFVICLP 503 (525)
Q Consensus 478 ~~~~~~~~~~~~~~~~~~~~~~~~~~ 503 (525)
..++...|...+++.+++..+++..+
T Consensus 451 tg~Y~~~f~~~g~~~~~s~~~~~~~~ 476 (509)
T KOG2504|consen 451 TGNYDHAFYFCGLCFLLSAVLLLILR 476 (509)
T ss_pred cCCeeeehhhcChHHHHHHHHHHHhH
Confidence 23477888888888888877666555
No 78
>TIGR00792 gph sugar (Glycoside-Pentoside-Hexuronide) transporter. GPH:cation symporters catalyze uptake of sugars in symport with a monovalent cation (H+ or Na+). Members of this family includes transporters for melibiose, lactose, raffinose, glucuronides, pentosides and isoprimeverose. Mutants of two groups of these symporters (the melibiose permeases of enteric bacteria, and the lactose permease of Streptococcus thermophilus) have been isolated in which altered cation specificity is observed or in which sugar transport is uncoupled from cation symport (i.e., uniport is catalyzed). The various members of the family can use Na+, H+ or Li, Na+ or Li+, H+ or Li+, or only H+ as the symported cation. All of these proteins possess twelve putative transmembrane a-helical spanners.
Probab=99.95 E-value=1.3e-25 Score=225.33 Aligned_cols=327 Identities=13% Similarity=0.072 Sum_probs=236.9
Q ss_pred ccceeeccccccchhhhhhhHHHHHHHHHHHhHHhhHhcccc---cCCch-HHHHHHHHHHHHHHHHHHhhhh------H
Q 041759 100 ALTIISEWGLECSSAFIKGLPAASHFTGCLLGIVFLATLADS---SLGRK-NLLFLSCLTMSVATSLTIFSNN------L 169 (525)
Q Consensus 100 ~~~i~~~~~~~~~s~~~~g~~~s~~~lg~~~~~~~~G~l~dr---~~Grk-~~~~~~~~~~~i~~~~~~~~~~------~ 169 (525)
.+.+.+++|+ ++.++|++.++..+..++..++.|+++|| |+||| +.++++....+++.+++.+.++ .
T Consensus 23 ~~~~~~~~g~---s~~~~g~i~~~~~i~~~i~~p~~G~lsDr~~~r~Grrr~~i~~~~~~~~i~~~~~~~~~~~~~~~~~ 99 (437)
T TIGR00792 23 LFFYTDVLGL---SAAFVGTLFLVARILDAITDPIMGNIVDRTRTRWGKFRPWLLIGAIPFSIVLVLLFTTPDFSATGKL 99 (437)
T ss_pred HHHHHHccCC---CHHHHHHHHHHHHHHHHhccchheEeeecCCCCCCCcchhHHHhHHHHHHHHHHHHhCCCCCcchHH
Confidence 5677788999 99999999999999999999999999997 36874 4677888888888888877653 5
Q ss_pred HHHHHHHHHHhhcccchhhhhheeeEeeec-CcchhhHHhHHHHHHHHHHHHHHHH-HHhc-------cCCchHHHHHHH
Q 041759 170 WIYSLLRFFSGISRATIGTCTIVLLTEKVG-TEWRGLVGILDSFFFTIGTLTLPAI-AYTN-------RSSSWTIIYLWT 240 (525)
Q Consensus 170 ~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~-~~~r~~~~~~~~~~~~~G~~l~~~l-~~~~-------~~~~wr~~f~~~ 240 (525)
+.+++.+++.+++.+...+...++..|..+ +++|++..++.+.+..+|.++++.+ +.+. ...+||+.+.+.
T Consensus 100 ~~~~~~~~~~~~~~~~~~~~~~al~~~~~~~~~~R~~~~~~~~~~~~~g~~l~~~~~~~l~~~~~~~~~~~g~~~~~~i~ 179 (437)
T TIGR00792 100 VYAYITYILLGLFYSFVNIPYWSLVPAITLDPRERESLSTFRRFGATLGGLLVAVIVLPLVSYFGGGDDKFGWFMFALVL 179 (437)
T ss_pred HHHHHHHHHHHHHHHhhcccHhhCcccccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCcccccHHHHHHHH
Confidence 677888899999988888888888899874 6899999999988888887766544 2222 246899999999
Q ss_pred HHHHHHHHhHhheeecCCchHhhhcCCHHHHHHHHHhhCCCcCCccchhhhhhhccCCCCcccccccccchhhhhhhhcc
Q 041759 241 SIPTLVYSGLLYIFVSESPRWLFMQGRQEEAVEVIKSLSPIKDSNQLSLSLVSAVSFGHEPAASSKESSFLSSIRELFVR 320 (525)
Q Consensus 241 ~~~~~~~~~~~~~~lpesp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 320 (525)
+++.++..++.++++||+++. +.++ + ++ +.+....+++++++
T Consensus 180 ~~l~~~~~~~~~~~~~e~~~~-----~~~~---------~-~~-----------------------~~~~~~~~~~l~~~ 221 (437)
T TIGR00792 180 ALIGVVSLIICFFGTKERYSE-----IPKN---------I-EK-----------------------KLSLKQIFKALFKN 221 (437)
T ss_pred HHHHHHHHHHHHcCCEecCCC-----CCcc---------c-cc-----------------------CCCHHHHHHHHhCC
Confidence 998888775666777775310 0000 0 00 00001356778889
Q ss_pred hhHHHHHHHHHHHHHHHHHHHhhhhhcccccCChhHHHHHHHHHhcccccccCchhHHHHHHHHHhhcChhHHHHHHHHH
Q 041759 321 RWALERTLALMVPGFGIGVVYYGMTLGIENLGFDIYLGVVFNALLEIPNLASTIPSFFLTFFLIQKWNRKSSLLVLFIIS 400 (525)
Q Consensus 321 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~d~~g~~~~~~~~~~~~ 400 (525)
|.++...+..++............+++.+....+............+ +.+++.++.+++.||+|+|+.+.++..+.
T Consensus 222 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i----~~ii~~~~~~~l~~r~g~~~~~~~~~~~~ 297 (437)
T TIGR00792 222 DQLLILCLAYLFYNLAFNIKNGVQVYYFTYVLGDPELFSYMGSIAIV----AGLIGVLLFPRLVKKFGRKILFAGGILLM 297 (437)
T ss_pred HHHHHHHHHHHHHHHHHHHHcchhheeEeeecCChHHHHHHHHHHHH----HHHHHHHHHHHHHHHhCcHHHHHHHHHHH
Confidence 88776665555555544433333444444321233334444444444 66689999999999999999999998888
Q ss_pred HHHHHHHHHhccccccchhHHHHHHHHHHHHHHHHHHHHHhhhccccC-------cchhhhhhHHHHHHHHHHHHHHHHH
Q 041759 401 GICSIMAVVANDISNAGKRMRIGLELASLFSAYIAYTVIFIYAIELFP-------TCVRNSATSIMRLAIIFAAIFSSVL 473 (525)
Q Consensus 401 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p-------~~~r~~~~~~~~~~~~~g~~~~p~i 473 (525)
+++.+.+.+.... .....+..++.+++.+...+..+++.+|..+ ++.+|...|+.+....+|..+++.+
T Consensus 298 ~~~~~~~~~~~~~----~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~~~~g~~lg~~i 373 (437)
T TIGR00792 298 VLGYLIFFFAGSN----LPLILVLIILAGFGQNFVTGLVWALVADTVDYGEWKTGVRAEGLVYSVRTFVRKLGQALAGFL 373 (437)
T ss_pred HHHHHHHHHcchh----HHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhhhhcCccchHHHHHHHHHHHHHHHHHHHHH
Confidence 8777666554322 3345556677778888888888889888765 4567899999999999999999888
Q ss_pred Hh
Q 041759 474 VA 475 (525)
Q Consensus 474 ~~ 475 (525)
.|
T Consensus 374 ~g 375 (437)
T TIGR00792 374 VG 375 (437)
T ss_pred HH
Confidence 77
No 79
>PRK08633 2-acyl-glycerophospho-ethanolamine acyltransferase; Validated
Probab=99.95 E-value=6e-26 Score=254.61 Aligned_cols=332 Identities=14% Similarity=-0.013 Sum_probs=239.5
Q ss_pred cceeeccccccchhhhhhhHHHHHHHHHHHhHHhhHhcccccCCchHHHHHHHHHHHHHHHHHH---hhhhHHHHHHHHH
Q 041759 101 LTIISEWGLECSSAFIKGLPAASHFTGCLLGIVFLATLADSSLGRKNLLFLSCLTMSVATSLTI---FSNNLWIYSLLRF 177 (525)
Q Consensus 101 ~~i~~~~~~~~~s~~~~g~~~s~~~lg~~~~~~~~G~l~dr~~Grk~~~~~~~~~~~i~~~~~~---~~~~~~~l~~~r~ 177 (525)
+.+..+++.. ++....+++.+++.++++++++++|+++|| +|||++++++.++.+++.++.. .+++++.++++|+
T Consensus 34 ~~~~~~~~~~-~~~~~~~~~~~~~~l~~~l~~~~~G~l~Dr-~grk~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~ 111 (1146)
T PRK08633 34 NTLIKAYDGS-EQVILTAIVNALFLLPFLLLSSPAGFLADK-FSKNRVIRIVKLFEVGLTLLIVLAYYLGWFWLAFAVTF 111 (1146)
T ss_pred HHHHHHcCcc-cHHHHHHHHHHHHHHHHHHHhhhHhhhccc-ccHHHHHHHHHHHHHHHHHHHHHHHHHccHHHHHHHHH
Confidence 3344445541 145568999999999999999999999999 9999999998877666555443 4578999999999
Q ss_pred HHhhcccchhhhhheeeEeeecCcchhhHHhHHHHHHHHHHHHHHHHHHhc-cC---------CchHHHHHHHHHHHHHH
Q 041759 178 FSGISRATIGTCTIVLLTEKVGTEWRGLVGILDSFFFTIGTLTLPAIAYTN-RS---------SSWTIIYLWTSIPTLVY 247 (525)
Q Consensus 178 l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~l~~~l~~~~-~~---------~~wr~~f~~~~~~~~~~ 247 (525)
++|++.+...+...+++.|++|+++|++++++...+..+|.++|++++.++ .. .+|++.+.+..+...+.
T Consensus 112 l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~ig~~lg~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 191 (1146)
T PRK08633 112 LLGAQSAIYSPAKYGIIPELVGKENLSRANGLLEAFTIVAILAGTALFSFLFESVNGNTPSEILGRIAPAGLVLLAVAVL 191 (1146)
T ss_pred HHHHHHHhhchHHHhhhHHhcCcccchhhhhHHHHHHHHHHHHHHHHHHHHHHhhccccccccccchHHHHHHHHHHHHH
Confidence 999999999999999999999999999999999999999999999995544 32 24555554444444444
Q ss_pred HhHhheeecCCchHhhhcCCHHHHHHHHHhhCCCcCCccchhhhhhhccCCCCcccccccccchhhhhhhhcchhHHHHH
Q 041759 248 SGLLYIFVSESPRWLFMQGRQEEAVEVIKSLSPIKDSNQLSLSLVSAVSFGHEPAASSKESSFLSSIRELFVRRWALERT 327 (525)
Q Consensus 248 ~~~~~~~lpesp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~ 327 (525)
.++..+.+||+|.....+.+. +. .. ........++.+++++.++..+
T Consensus 192 ~~~~~~~~~~~~~~~~~~~~~-~~----------~~----------------------~~~~~~~~~~~l~~~~~~~~~~ 238 (1146)
T PRK08633 192 GLIFAYRLPKVPAAAPEVFDK-KK----------YL----------------------FPKLLWRNLKLLRSDRVLWLAI 238 (1146)
T ss_pred HHHHHhcCcCCCCCCcccccc-cc----------cc----------------------cHHHHHHHHHHHhcCcHHHHHH
Confidence 335556678765321100000 00 00 0000013566778888766655
Q ss_pred HHHHHHHHHHHHHHhhhhhc-ccccCChhH-HHHHHHHHhcccccccCchhHHHHHHHHHhhcChhHHHHHHHHHHHHHH
Q 041759 328 LALMVPGFGIGVVYYGMTLG-IENLGFDIY-LGVVFNALLEIPNLASTIPSFFLTFFLIQKWNRKSSLLVLFIISGICSI 405 (525)
Q Consensus 328 ~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~l~d~~g~~~~~~~~~~~~~~~~~ 405 (525)
+..++.++........++.+ ...+|.+.. ..+.+.+...+ +.+++.++.+++.||+++++.+.++.++.+++.+
T Consensus 239 ~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~~g~~~~~~~i----g~~~g~~~~g~l~~r~~~~~~~~~~~~~~~~~~~ 314 (1146)
T PRK08633 239 IGLSYFWFISQLAQANFPAYAKEVLGLDNTFQVQYLLAASAI----GIGIGSLLAGRLSGRHIELGLVPLGALGLALSLF 314 (1146)
T ss_pred HHHHHHHHHHHHHHHhhHHHHHHHhCCCcHHHHHHHHHHHHH----HHHHHHHHHHHHhCCceEccchhHHHHHHHHHHH
Confidence 55555544443333334444 455787777 67777766666 7779999999999999998888888887777776
Q ss_pred HHHHhccccccchhHHHHHHHHHHHHHHHHHHHHHhhhccccCcchhhhhhHHHHHHHHHHHHHHHHHHhh
Q 041759 406 MAVVANDISNAGKRMRIGLELASLFSAYIAYTVIFIYAIELFPTCVRNSATSIMRLAIIFAAIFSSVLVAA 476 (525)
Q Consensus 406 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~r~~~~~~~~~~~~~g~~~~p~i~~~ 476 (525)
++.+..+ ....++..++.+++.+...+...+++.+..|++.||+++|+.+++..+|.++++.+.+.
T Consensus 315 ~~~~~~~-----~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~~rg~~~~~~~~~~~lg~~~~~~~~~~ 380 (1146)
T PRK08633 315 LLPTAPS-----LASVLVLFFLFGFSAGLFIVPLNALIQFRAPEKELGKVLAANNFLQNVGMLLFLALTTL 380 (1146)
T ss_pred HHHHhhh-----HHHHHHHHHHHHHHHHHhhHHHHHHHhhcCCccchhhhhHHHHHHHHHHHHHHHHHHHH
Confidence 6665443 23555666777788787778888999999999999999999999999888777766653
No 80
>PRK11902 ampG muropeptide transporter; Reviewed
Probab=99.95 E-value=2.4e-25 Score=220.36 Aligned_cols=352 Identities=14% Similarity=0.113 Sum_probs=238.5
Q ss_pred ccceeeccccccchhhhhhhHHHHHHHHHHHhHHhhHhcccccC-----CchH-HHHHHHHHHHHHHHHHHhh---hhHH
Q 041759 100 ALTIISEWGLECSSAFIKGLPAASHFTGCLLGIVFLATLADSSL-----GRKN-LLFLSCLTMSVATSLTIFS---NNLW 170 (525)
Q Consensus 100 ~~~i~~~~~~~~~s~~~~g~~~s~~~lg~~~~~~~~G~l~dr~~-----Grk~-~~~~~~~~~~i~~~~~~~~---~~~~ 170 (525)
+|.+-++.|+ +..++|++..+... .+..+++|+++|| + |||| ++.++.++.+++..+.++. .+++
T Consensus 22 ~~~~l~~~g~---~~~~ig~~~~~~~~--~~~~~l~g~~~Dr-~~~~~~g~rr~~l~~~~~~~~l~~~~l~~~~~~~~~~ 95 (402)
T PRK11902 22 LQAWMTVEGL---DIQTIGFFSLVGQA--YIFKFLWAPLMDR-YTPPLLGRRRGWLLLTQVGLAASIAAMAFCPPHAALW 95 (402)
T ss_pred HHHHHHHcCC---CHHHHHHHHHHHHH--HHHHHHHHHHHHc-ccccCCCcchhHHHHHHHHHHHHHHHHHhcCccchHH
Confidence 8888888899 99999999777765 6899999999999 9 8875 7888888888888887776 4578
Q ss_pred HHHHHHHHHhhcccchhhhhheeeEeeecCcchhhHHhHHHHHHHHHHHHHHHHHH-hccC-CchHHHHHHHHHHHHHHH
Q 041759 171 IYSLLRFFSGISRATIGTCTIVLLTEKVGTEWRGLVGILDSFFFTIGTLTLPAIAY-TNRS-SSWTIIYLWTSIPTLVYS 248 (525)
Q Consensus 171 ~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~l~~~l~~-~~~~-~~wr~~f~~~~~~~~~~~ 248 (525)
.+++..++.++..+...+...+++.|+.|+++|+++.++...+..+|.++++.++. +... .|||..|++.++..++..
T Consensus 96 ~l~~~~~~~~~~~~~~~~~~~al~~~~~~~~~r~~~~~~~~~g~~~g~i~g~~l~~~l~~~~~gw~~~f~i~a~~~l~~~ 175 (402)
T PRK11902 96 PLAGLAVLVAFLSASQDIVFDAYSTDVLHPEERGAGAAVKVLGYRLAMLVSGGLALWLADRVLGWGNTYLLMAGLMLAGA 175 (402)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhcChhhhhHHHHHHHHHHHHHHHHHhHHHHHHHhcccCHHHHHHHHHHHHHHHH
Confidence 88888888899999999999999999999999999999999999999999888744 4443 499999999888877665
Q ss_pred hHhheeecCCchHhhhcCCHHHHHHHHHhhCCCcCCccchhhhhhhccCCCCcccccccccchhhhhhhhcchhHHHHHH
Q 041759 249 GLLYIFVSESPRWLFMQGRQEEAVEVIKSLSPIKDSNQLSLSLVSAVSFGHEPAASSKESSFLSSIRELFVRRWALERTL 328 (525)
Q Consensus 249 ~~~~~~lpesp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~ 328 (525)
+..+++||+++. +++.++.++ +. ...+++++++|.++..++
T Consensus 176 -l~~~~~~e~~~~---~~~~~~~~~---~~--------------------------------~~~~~~l~~~~~~~~~l~ 216 (402)
T PRK11902 176 -LTTLWAPEPEVP---ARPPRSLGE---AV--------------------------------VGPLRDFFSRRGAWALLL 216 (402)
T ss_pred -HHHHhcCCCccc---ccccchhHH---HH--------------------------------HHHHHHHHhCcCHHHHHH
Confidence 445567775431 000000000 00 135677889988666555
Q ss_pred HHHHHHHHHHHH-HhhhhhcccccCChhHHHHHHHHHhcccccccCchhHHHHHHHHHhhcChhHHHHHHHHHHHHHHHH
Q 041759 329 ALMVPGFGIGVV-YYGMTLGIENLGFDIYLGVVFNALLEIPNLASTIPSFFLTFFLIQKWNRKSSLLVLFIISGICSIMA 407 (525)
Q Consensus 329 ~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~d~~g~~~~~~~~~~~~~~~~~~~ 407 (525)
..++........ .+..+++.++.|.+....+...+.... ++.+++.++.+++.||+++|+.+..+..+..+..+.+
T Consensus 217 ~~~l~~~~~~~~~~~~~~~l~~~~G~~~~~~g~~~~~~~~---~~~i~g~~~~g~l~~r~g~~~~l~~~~~~~~l~~l~~ 293 (402)
T PRK11902 217 LIVLYKLGDAFAGSLSTTFLIRGAGFSAGEVGIVNKTLGL---AATIVGALAGGTLMVRLGLYRSLMLFGVLQAVSNLGY 293 (402)
T ss_pred HHHHHHhHHHHHHHHHHHHHHHhcCCCHHHHHHHHhHHHH---HHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHH
Confidence 544444333222 233455556688888777766543222 1355889999999999999998877776665554433
Q ss_pred HHhccccccchhHHHHHH----HHHHHHHHHHHHHHHhhhccccCcchhhhhhHHHHHHHHHHHHHHHHHHhh--ccCch
Q 041759 408 VVANDISNAGKRMRIGLE----LASLFSAYIAYTVIFIYAIELFPTCVRNSATSIMRLAIIFAAIFSSVLVAA--GSNNE 481 (525)
Q Consensus 408 ~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~p~~~r~~~~~~~~~~~~~g~~~~p~i~~~--~~~~~ 481 (525)
......+ .+........ +..++..+...+....++.+.+|.+.+ +..+....++..+++.+.|. +..++
T Consensus 294 ~~~~~~~-~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~l~~~~~~~~~G~l~~~~G~ 368 (402)
T PRK11902 294 WVLAVTP-KHLWTMALAIGIENLCGGMGTAAFVALLMALCNRSFSATQY----ALLSALASVGRVYVGPTSGYLVEAYGW 368 (402)
T ss_pred HHHHhcC-CcHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCcHHHH----HHHHHHHHHHHHHHHHHHHHHHHHhCh
Confidence 2211110 1122333333 234445555566777777777776554 44444455566544445553 34466
Q ss_pred hHHHHHHHHHHHHHHHHHHhccC
Q 041759 482 FVSYGVFGLVIICCGFFVICLPE 504 (525)
Q Consensus 482 ~~~~~~~~~~~~~~~~~~~~~~~ 504 (525)
...|.+.+++.+++.++.+..+.
T Consensus 369 ~~~f~~~~~~~~~~~~~~~~~~~ 391 (402)
T PRK11902 369 PGFYLMTVVIALPGLALLWLMRG 391 (402)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhh
Confidence 77777777777776665554443
No 81
>PRK11128 putative 3-phenylpropionic acid transporter; Provisional
Probab=99.95 E-value=1.6e-25 Score=220.09 Aligned_cols=339 Identities=12% Similarity=0.022 Sum_probs=239.6
Q ss_pred ccceeeccccccchhhhhhhHHHHHHHHHHHhHHhhHhcccccCCch----HHHHHHHHHHHHHHHHHHhhhhHHHHHHH
Q 041759 100 ALTIISEWGLECSSAFIKGLPAASHFTGCLLGIVFLATLADSSLGRK----NLLFLSCLTMSVATSLTIFSNNLWIYSLL 175 (525)
Q Consensus 100 ~~~i~~~~~~~~~s~~~~g~~~s~~~lg~~~~~~~~G~l~dr~~Grk----~~~~~~~~~~~i~~~~~~~~~~~~~l~~~ 175 (525)
+|.+.+|+|. |..++|++.+++.++..++++++|+++|| +||| +.+.++..+. .......++++|.+++.
T Consensus 27 l~~~l~~~g~---s~~~iG~~~~~~~l~~~l~~~~~g~l~dr-~g~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~l~i~ 100 (382)
T PRK11128 27 WSVWLKGQGY---TPETIGLLLGAGLVARFLGSLLIAPRVKD-PSQLIPALRLLALLTLLF--AVAFWFGAHSFWLLFVA 100 (382)
T ss_pred HHHHHHhcCC---CHHHHHHHHHHHHHHHHhhhHHHHHHHhh-hcchHHHHHHHHHHHHHH--HHHHHHhcccHHHHHHH
Confidence 7788899999 99999999999999999999999999999 9984 3333222222 22333446889999999
Q ss_pred HHHHhhcccchhhhhheeeEeeecCcchhhHHhHHHHHHHHHHHHHHHHHH-hccCCchHHHHHHHHHHHHHHHhHhhee
Q 041759 176 RFFSGISRATIGTCTIVLLTEKVGTEWRGLVGILDSFFFTIGTLTLPAIAY-TNRSSSWTIIYLWTSIPTLVYSGLLYIF 254 (525)
Q Consensus 176 r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~l~~~l~~-~~~~~~wr~~f~~~~~~~~~~~~~~~~~ 254 (525)
|++.|++.+...+...+++.++ +++|++..+....+.++|.++||+++. +.+.+|||..|++.++..++.. +..++
T Consensus 101 ~~l~g~~~~~~~~~~~a~~~~~--~~~~~~a~~~~~~~~~lg~~igp~lgg~l~~~~g~~~~f~~~~~~~~~~~-~~~~~ 177 (382)
T PRK11128 101 IGLFNLFFSPLVPLTDALANTW--QKQIGLDYGKVRLWGSIAFVIGSALTGKLVSWFGEQAILWILTAGVASML-LGQLL 177 (382)
T ss_pred HHHHHHHHcccccHHHHHHHHH--HhhccCCcchHHHHHHHHHHHHHHHHHHHHHHcChhHHHHHHHHHHHHHH-HHHHc
Confidence 9999999988888887777765 456888888899999999999999955 4566799999988876555544 33344
Q ss_pred ecCCchHhhhcCCHHHHHHHHHhhCCCcCCccchhhhhhhccCCCCcccccccccchhhhhhhhcchhHHHHHHHHHHHH
Q 041759 255 VSESPRWLFMQGRQEEAVEVIKSLSPIKDSNQLSLSLVSAVSFGHEPAASSKESSFLSSIRELFVRRWALERTLALMVPG 334 (525)
Q Consensus 255 lpesp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~ 334 (525)
.||.++ +++++ + +. + +. ..++++++|+|.++...+..++..
T Consensus 178 ~~~~~~----~~~~~------------~-------------~~-~----~~-----~~~~~~i~~~~~~~~~~~~~~l~~ 218 (382)
T PRK11128 178 RPTIMP----QGESR------------Q-------------QE-S----AG-----WPAWKALLKEPTVWRFLLCVSLLQ 218 (382)
T ss_pred cCCCCC----ccccc------------c-------------cc-c----cc-----cchHHHHHcChhHHHHHHHHHHHH
Confidence 454311 00000 0 00 0 00 136778999998777666666555
Q ss_pred HHHHHHHhhhhhcccccCChhHHHHHHHHHhcccccccCchhHHHHHHHHHhhcChhHHHHHHHHHHHHHHHHHHhcccc
Q 041759 335 FGIGVVYYGMTLGIENLGFDIYLGVVFNALLEIPNLASTIPSFFLTFFLIQKWNRKSSLLVLFIISGICSIMAVVANDIS 414 (525)
Q Consensus 335 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~d~~g~~~~~~~~~~~~~~~~~~~~~~~~~~ 414 (525)
......+...+.+.++.|.+....+...+...+ +.++..++.+++.||+++|+.+..+..+.++..+++...++
T Consensus 219 ~~~~~~~~~~~~~~~~~g~s~~~~g~~~~~~~~----~~~~~~~~~g~l~~r~~~~~~l~~~~~~~~~~~~~~~~~~~-- 292 (382)
T PRK11128 219 GSHAAYYGFSAIYWQAAGYSASTIGYLWSLGVV----AEVLIFAFSNRLFRRWSARDLLLLSAICGVVRWGLMGSTTA-- 292 (382)
T ss_pred HHhHhHHHHHHHHHHHCCCCHhHHHHHHHHHHH----HHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHhhhh--
Confidence 554444444455666788887777777666555 67788899999999999999999888888887766655433
Q ss_pred ccchhHHHHHHHHHHHHHHHHHHHHHhhhccccCcchhhhhhHHHHHH-HHHHHHHHHHHHhhc--cCchhHHHHHHHHH
Q 041759 415 NAGKRMRIGLELASLFSAYIAYTVIFIYAIELFPTCVRNSATSIMRLA-IIFAAIFSSVLVAAG--SNNEFVSYGVFGLV 491 (525)
Q Consensus 415 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~r~~~~~~~~~~-~~~g~~~~p~i~~~~--~~~~~~~~~~~~~~ 491 (525)
.+..++..++.+++.+...+....+..+. +++++++..+..+.. ..+|..++|.+.|.. ..+. ..+...+++
T Consensus 293 ---~~~~~~~~~l~g~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~g~~ig~~i~G~l~~~~g~-~~~~~~~~~ 367 (382)
T PRK11128 293 ---LPWLIVIQILHCGTFTVCHLAAMRYIAAR-PGSEVIRLQALYSALAMGGSIAIMTVLSGFLYQHLGA-GVFWVMALV 367 (382)
T ss_pred ---HHHHHHHHHHHHHHHHHHHHHHHHHHHHC-CHhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccH-HHHHHHHHH
Confidence 23556677777888887778777887776 455568888877644 466778999999853 2233 445555555
Q ss_pred HHHHHH
Q 041759 492 IICCGF 497 (525)
Q Consensus 492 ~~~~~~ 497 (525)
.+++.+
T Consensus 368 ~~~~~~ 373 (382)
T PRK11128 368 ALPALF 373 (382)
T ss_pred HHHHHH
Confidence 544433
No 82
>TIGR00901 2A0125 AmpG-related permease.
Probab=99.95 E-value=4.7e-26 Score=221.99 Aligned_cols=317 Identities=16% Similarity=0.116 Sum_probs=229.1
Q ss_pred ccceeeccccccchhhhhhhHHHHHHHHHHHhHHhhHhcccccC-----CchHH-HHHHHHHHHHHHHHHHhh---hhHH
Q 041759 100 ALTIISEWGLECSSAFIKGLPAASHFTGCLLGIVFLATLADSSL-----GRKNL-LFLSCLTMSVATSLTIFS---NNLW 170 (525)
Q Consensus 100 ~~~i~~~~~~~~~s~~~~g~~~s~~~lg~~~~~~~~G~l~dr~~-----Grk~~-~~~~~~~~~i~~~~~~~~---~~~~ 170 (525)
.|.+.+|+|+ |..++|+.... .+...+ .+++|+++|| + ||||. ++.+.++.++..++.++. .+.+
T Consensus 11 ~~~~~~~~g~---s~~~~g~~~~~-~~~~~~-~~~~g~~~Dr-~~~~~~Grr~~~l~~~~~~~~~~~~~l~~~~~~~~l~ 84 (356)
T TIGR00901 11 LPYWLRSKNV---SLKTIGFFSLV-GLPYSL-KFLWSPLVDT-VYLPFFGRRRSWLVLTQVLLLSLLLILSFLVPSTDLP 84 (356)
T ss_pred HHHHHHHcCC---CHHHHHHHHHH-HHHHHH-HHHHHHHHhc-ccCCCCCccHHHHHHHHHHHHHHHHHHHcCCcchhHH
Confidence 7899999999 99999999755 455555 8999999999 7 89886 567777888877777776 5677
Q ss_pred HHHHHHHHHhhcccchhhhhheeeEeeecCcchhhHHhHHHHHHHHHHHHHHHHH-HhccCCc--------hHHHHHHHH
Q 041759 171 IYSLLRFFSGISRATIGTCTIVLLTEKVGTEWRGLVGILDSFFFTIGTLTLPAIA-YTNRSSS--------WTIIYLWTS 241 (525)
Q Consensus 171 ~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~l~~~l~-~~~~~~~--------wr~~f~~~~ 241 (525)
.+.+..++.|++.+...+...+++.|++|+++|+++.++...+..+|.++++.++ .+....+ ||..|++.+
T Consensus 85 ~l~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~r~~~~~~~~~~~~~G~~~~~~l~~~l~~~~g~~~~~~~~wr~~f~i~a 164 (356)
T TIGR00901 85 LLAGLAFLIAFFSATQDIALDAWRLEILSDEELGYGSTIYIVGYRAGMLLSGSLALVLASPEFANTGLITLWGYIFFWTA 164 (356)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhCCHhhhchHHHHHHHHHHHHHHHHHHHHHHHhhhcccccccccccHHHHHHHH
Confidence 7888888889999989999999999999999999999999999999999999885 4445556 999999999
Q ss_pred HHHHHHHhHhheeecCCchHhhhcCCHHHHHHHHHhhCCCcCCccchhhhhhhccCCCCcccccccccchhhhhhhhcch
Q 041759 242 IPTLVYSGLLYIFVSESPRWLFMQGRQEEAVEVIKSLSPIKDSNQLSLSLVSAVSFGHEPAASSKESSFLSSIRELFVRR 321 (525)
Q Consensus 242 ~~~~~~~~~~~~~lpesp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~ 321 (525)
+..++..++.++..||+++. +++.++.++ +. ...++++++++
T Consensus 165 i~~l~~~~~~~~~~~e~~~~---~~~~~~~~~---~~--------------------------------~~~~~~~~~~~ 206 (356)
T TIGR00901 165 LLILPGLLVTLFLAKEPQED---ASVPKPLTQ---AV--------------------------------LKPIREFFQRK 206 (356)
T ss_pred HHHHHHHHHHHHhccCCCcc---cccchhHHH---HH--------------------------------HHHHHHHHHhc
Confidence 88877663444445664321 000000000 00 02455666666
Q ss_pred h---HHHHHHHHHHHHHHHHHHHhhhhhcccccCChhHHHHHHHHHhc-ccccccCchhHHHHHHHHHhhcChhHHHHHH
Q 041759 322 W---ALERTLALMVPGFGIGVVYYGMTLGIENLGFDIYLGVVFNALLE-IPNLASTIPSFFLTFFLIQKWNRKSSLLVLF 397 (525)
Q Consensus 322 ~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~l~d~~g~~~~~~~~~ 397 (525)
. .+...+..++............+.+.++.|.+..+.+....... + +.+++.++++++.||+|+|+.+..+.
T Consensus 207 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~~g~~~~~~~~~----~~~~g~~~~g~l~~r~g~~~~l~~~~ 282 (356)
T TIGR00901 207 NMIQALLLLLLIVLYKLGDSAATVLTTLFLLDMGFSKEEIALVAKINGLL----GAILGGLIGGIIMQPLNILYALLLFG 282 (356)
T ss_pred CchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHhHHHHHH----HHHHHHHHHHHHHhhhhHHHHHHHHH
Confidence 4 34344433444444444444556666668888877666555433 3 44588999999999999999988888
Q ss_pred HHHHHHHHHHHHhccccc------cchhHHHHHHHHHHHHHHHHHHHHHhhhccccCcchhhhhhHHHHHHHH
Q 041759 398 IISGICSIMAVVANDISN------AGKRMRIGLELASLFSAYIAYTVIFIYAIELFPTCVRNSATSIMRLAII 464 (525)
Q Consensus 398 ~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~r~~~~~~~~~~~~ 464 (525)
++.++...++.+...... .+........++.+++.+..++...++..|.+|+++||+.+|+.+...+
T Consensus 283 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~p~~~~g~~~g~~~~~~~ 355 (356)
T TIGR00901 283 IVQALTNAGFVWLASNGHHDGITFPHLLMLFLTITLEAVTGGLGTVAFVAFLSKLSNPKFGATQMALLSSLSA 355 (356)
T ss_pred HHHHHHHHHHHHHHhcCcccccccchHHHHHHHHHHHHHHhHHHHHHHHHHHHHhcCCCccHHHHHHHHHHHh
Confidence 887777665554321100 1123455566677888888999999999999999999999999887653
No 83
>PRK09528 lacY galactoside permease; Reviewed
Probab=99.94 E-value=1.7e-25 Score=222.93 Aligned_cols=351 Identities=15% Similarity=0.061 Sum_probs=222.0
Q ss_pred ccceeeccccccchhhhhhhHHHHHHHHHHHhHHhhHhcccccCCchHHHHHHHHHHHHHHHHHH---hhh-----hHHH
Q 041759 100 ALTIISEWGLECSSAFIKGLPAASHFTGCLLGIVFLATLADSSLGRKNLLFLSCLTMSVATSLTI---FSN-----NLWI 171 (525)
Q Consensus 100 ~~~i~~~~~~~~~s~~~~g~~~s~~~lg~~~~~~~~G~l~dr~~Grk~~~~~~~~~~~i~~~~~~---~~~-----~~~~ 171 (525)
...+++++|+ +..+.|++.+++.++..+++++.|+++|| +|||++++++..+.+++..... .++ .+..
T Consensus 34 ~~~l~~~~g~---s~~~~g~~~s~~~l~~~i~~~~~G~l~Dr-~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 109 (420)
T PRK09528 34 PIWLHDINGL---SGTDTGIIFSANSLFALLFQPLYGLISDK-LGLKKHLLWIISGLLVLFGPFFIYVFAPLLQYNILLG 109 (420)
T ss_pred HHHHHHhcCC---CHHHHHHHHHHHHHHHHHHHHHHHHHHHH-hCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3456667999 99999999999999999999999999999 9999999887666654433211 111 1111
Q ss_pred HHHHHHHHhhcccchhhhhheeeEeeec--CcchhhHHhHHHHHHHHHHHHHHHHHHhccCCchHHHHHHHHHHHHHHHh
Q 041759 172 YSLLRFFSGISRATIGTCTIVLLTEKVG--TEWRGLVGILDSFFFTIGTLTLPAIAYTNRSSSWTIIYLWTSIPTLVYSG 249 (525)
Q Consensus 172 l~~~r~l~G~~~~~~~~~~~~~i~~~~~--~~~r~~~~~~~~~~~~~G~~l~~~l~~~~~~~~wr~~f~~~~~~~~~~~~ 249 (525)
.++++++.|.+.....+. +.++.+ .+++++.++......++|..++|.++..+...+|+++|++.+++.++..+
T Consensus 110 ~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~g~~~g~~~~~~~~g~~i~~~~~g~l~~~~~~~~f~~~~~~~~~~~~ 185 (420)
T PRK09528 110 AIVGGIYLGFGFLAGAGA----IEAYIERVSRRSGFEYGRARMWGSLGWALCAFIAGILFNINPQINFWLGSGSALILLV 185 (420)
T ss_pred HHHHHHHhhhhhccchhh----hhhHHHHHHhhccccchhhHHhhhHHHHHHHHHHHHHHhcCchHhHHHHHHHHHHHHH
Confidence 233344444433333332 333333 34567788888889999999999986655556999999998888877663
Q ss_pred HhheeecCCchHhhhcCCHHHHHHHHHhhCCCcCCccchhhhhhhccCCCCcccccccccchhhhhhhhcchhHHHHHHH
Q 041759 250 LLYIFVSESPRWLFMQGRQEEAVEVIKSLSPIKDSNQLSLSLVSAVSFGHEPAASSKESSFLSSIRELFVRRWALERTLA 329 (525)
Q Consensus 250 ~~~~~lpesp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~ 329 (525)
+.++..+|.++. ++.+ + +++ ++.+ +......++.+|+|.++...+.
T Consensus 186 ~~~~~~~~~~~~-------~~~~-------~-~~~--------------~~~~-----~~~~~~~~~~l~~~~~~~l~l~ 231 (420)
T PRK09528 186 LLFFAKPDAPST-------AKVA-------N-ALG--------------ANAS-----AVSLKDALALLKLPKFWFLVLY 231 (420)
T ss_pred HHhcccccccch-------hhhc-------c-chh--------------cccc-----cccHHHHHHHccCCCeEeehHH
Confidence 444334443210 0000 0 000 0000 0001245567788875554443
Q ss_pred HHHHHHHHHHHHhhhhhccc----ccCChhHHHHHHHHHhcccccccCchhHHHHHHHHHhhcChhHHHHHHHHHHHHHH
Q 041759 330 LMVPGFGIGVVYYGMTLGIE----NLGFDIYLGVVFNALLEIPNLASTIPSFFLTFFLIQKWNRKSSLLVLFIISGICSI 405 (525)
Q Consensus 330 ~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~d~~g~~~~~~~~~~~~~~~~~ 405 (525)
.+.............+.+.. +.+.+....+.+.++..+ +.+++.++.+++.||+|+|+.+..+..+..+..+
T Consensus 232 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~----~~~~~~~~~g~l~dr~g~~~~~~~~~~l~~~~~~ 307 (420)
T PRK09528 232 VIGVACFYDVFDQQFPNFFASFFATPEQGTRVFGYLNSFQVF----LEALIMFFAPFIINRIGAKNALLLAGTIMAVRII 307 (420)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhccCcchHHHHHHHHHHHH----HHHHHHHHHHHHHHHhCcchhhHHHHHHHHHHHH
Confidence 33332222221111222222 224444445555555444 5558899999999999999999888888888777
Q ss_pred HHHHhccccccchhHHHHHHHHHHHHHHHHHHHHHhhhccccCcchhhhhhHH-HHHHHHHHHHHHHHHHhh--ccCchh
Q 041759 406 MAVVANDISNAGKRMRIGLELASLFSAYIAYTVIFIYAIELFPTCVRNSATSI-MRLAIIFAAIFSSVLVAA--GSNNEF 482 (525)
Q Consensus 406 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~r~~~~~~-~~~~~~~g~~~~p~i~~~--~~~~~~ 482 (525)
++.+..+. + ..+...++.+.+.+...+....+..|.+|++.+++..+. .++...+|.+++|.+.|. +..++.
T Consensus 308 l~~~~~~~----~-~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~lg~~ig~~~~G~l~~~~G~~ 382 (420)
T PRK09528 308 GSGFATGP----L-EVSILKLLHAFEVPFLLVGVFKYITLNFDVRLSATIYLVGFQFAKQLGAVFLSTLAGNLYDSIGFQ 382 (420)
T ss_pred HHHhcccH----H-HHHHHHHHHHHHHHHHHHHHHHHHHHHcCccceeeeeeehHHHHHHHHHHHHHHHHHHHHHhhCch
Confidence 76654433 3 445556666666666666677888899999998887765 566778999999999985 334667
Q ss_pred HHHHHHHHHHHHHHHHHHh
Q 041759 483 VSYGVFGLVIICCGFFVIC 501 (525)
Q Consensus 483 ~~~~~~~~~~~~~~~~~~~ 501 (525)
..|.+.+++.++..++.++
T Consensus 383 ~~f~~~~~~~~i~~~~~~~ 401 (420)
T PRK09528 383 GTYLILGGIVLLFTLISVF 401 (420)
T ss_pred HHHHHHHHHHHHHHHHHHH
Confidence 7787777776665554443
No 84
>PRK06814 acylglycerophosphoethanolamine acyltransferase; Provisional
Probab=99.94 E-value=3.5e-25 Score=247.47 Aligned_cols=332 Identities=13% Similarity=0.051 Sum_probs=238.3
Q ss_pred ceeeccccccchhhhhhhHHHHHHHHHHHhHHhhHhcccccCCchHHHHH---HHHHHHHHHHHHHhhhhHHHHHHHHHH
Q 041759 102 TIISEWGLECSSAFIKGLPAASHFTGCLLGIVFLATLADSSLGRKNLLFL---SCLTMSVATSLTIFSNNLWIYSLLRFF 178 (525)
Q Consensus 102 ~i~~~~~~~~~s~~~~g~~~s~~~lg~~~~~~~~G~l~dr~~Grk~~~~~---~~~~~~i~~~~~~~~~~~~~l~~~r~l 178 (525)
.+..+.+.. .....++..+++.++++++++++|+++|| +|||+++.. ..++..+..+.....+++++++++|++
T Consensus 41 ~~~~~~~~~--~~~~~~l~~~~~~l~~~l~~~~~G~laDr-~~rk~~~~~~~~~~~~~~~~~~~~~~~~s~~~l~~~~~l 117 (1140)
T PRK06814 41 GLSGALGAY--NNALVTLAGAVFILPFFIFSALAGQLADK-YDKAKLAKILKFAEIGIAALAIYGFHLNSVPLLFAALFL 117 (1140)
T ss_pred Hhccccccc--hHHHHHHHHHHHHHHHHHHhhhHHhhhhh-ccHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHH
Confidence 444444441 33567889999999999999999999999 999997643 223333333333445899999999999
Q ss_pred HhhcccchhhhhheeeEeeecCcchhhHHhHHHHHHHHHHHHHHHH-HHhccCCchHHHHHHHHHHHHHHHhHhheeecC
Q 041759 179 SGISRATIGTCTIVLLTEKVGTEWRGLVGILDSFFFTIGTLTLPAI-AYTNRSSSWTIIYLWTSIPTLVYSGLLYIFVSE 257 (525)
Q Consensus 179 ~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~l~~~l-~~~~~~~~wr~~f~~~~~~~~~~~~~~~~~lpe 257 (525)
+|++.+...|...+++.+++++++|++++++.+++.++|.++||++ +.+....+|++.|+..++..++.+ +..+++|+
T Consensus 118 ~gi~~a~~~p~~~a~l~~~~~~~~~~~a~~~~~~~~~ig~~igp~l~g~l~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~ 196 (1140)
T PRK06814 118 MGIHSALFGPIKYSILPDHLNKDELLGANALVEAGTFIAILLGTIIGGLATISGNFVILVALLMGIAVLGW-LASLFIPK 196 (1140)
T ss_pred HHHHHHhhchHHHHhhHhhcCccccchhhHHHHHHHHHHHHHHHHHHHHHHhccccHHHHHHHHHHHHHHH-HHHhhCCC
Confidence 9999999999999999999999999999999999999999999999 555677899999955555555544 56666776
Q ss_pred CchHhhhcCCHHHHHHHHHhhCCCcCCccchhhhhhhccCCCCcccccccccchhhhhhhhcchhHHHHHHHHHHHHHHH
Q 041759 258 SPRWLFMQGRQEEAVEVIKSLSPIKDSNQLSLSLVSAVSFGHEPAASSKESSFLSSIRELFVRRWALERTLALMVPGFGI 337 (525)
Q Consensus 258 sp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~ 337 (525)
++.- +.+.+......+. ....++.+.+++.++...+..++.++..
T Consensus 197 ~~~~---~~~~~~~~~~~~~--------------------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 241 (1140)
T PRK06814 197 TGNA---APDLKIDRNIIRS--------------------------------TITLLKYAKADKRIWLAILGISWFWLVG 241 (1140)
T ss_pred CCCC---CCCCeeccchHHH--------------------------------HHHHHHHHhcCchHHHHHHHHHHHHHHH
Confidence 5320 0000000000000 0135677888888777766666665555
Q ss_pred HHHHhhhhhccc-ccCChhHHHHHHHHHhcccccccCchhHHHHHHHHHhhcChhHHHHHHHHHHHHHHHHHHhccc---
Q 041759 338 GVVYYGMTLGIE-NLGFDIYLGVVFNALLEIPNLASTIPSFFLTFFLIQKWNRKSSLLVLFIISGICSIMAVVANDI--- 413 (525)
Q Consensus 338 ~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~d~~g~~~~~~~~~~~~~~~~~~~~~~~~~--- 413 (525)
......+|.+.. .+|.+....+.+.+...+ +.++|.++.+++.++..+++.+..+.++.++..+.+.+....
T Consensus 242 ~~~~~~~p~~~~~~~g~~~~~~g~~~~~~~~----g~~ig~~~~g~l~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~ 317 (1140)
T PRK06814 242 AVVLSQLPLLAKETLGGDENVATLFLAVFSV----GVAVGSFLASKLSEGRITLLYVPIGALLMGLFGLDLAFASSSVPA 317 (1140)
T ss_pred HHHHHHhHHHHHHHcCCchHHHHHHHHHHHH----HHHHHHHHHHHHhCCceeeeeehHHHHHHHHHHHHHHhccccccc
Confidence 444444555554 478888888888888777 888999999999988777766666655555554444332000
Q ss_pred ------------cccchhHHHHHHHHHHHHHHHHHHHHHhhhccccCcchhhhhhHHHHHHHHHHHHHHHHHHhh
Q 041759 414 ------------SNAGKRMRIGLELASLFSAYIAYTVIFIYAIELFPTCVRNSATSIMRLAIIFAAIFSSVLVAA 476 (525)
Q Consensus 414 ------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~r~~~~~~~~~~~~~g~~~~p~i~~~ 476 (525)
...+.+..++..++.+++.+...+...+++.+..|++.+|+++|+.++...+|..+++++.+.
T Consensus 318 ~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~~~G~v~g~~~~~~~~~~~ig~~~~g~ 392 (1140)
T PRK06814 318 EPAQLKSILVFLSKRHGWRILIDLFGLAAAGGLYIVPLFAALQAWANPAHRARVIAANNVLNAAFMVAGTIILAL 392 (1140)
T ss_pred ccccccchhhhhcccccHHHHHHHHHHHHHHHHhHHHHHHHHHhhCCcccceeeeHHHHHHHHHHHHHHHHHHHH
Confidence 001123455666677788888888889999999999999999999999999999999988874
No 85
>TIGR00882 2A0105 oligosaccharide:H+ symporter.
Probab=99.94 E-value=1.6e-24 Score=214.15 Aligned_cols=349 Identities=17% Similarity=0.069 Sum_probs=232.7
Q ss_pred ceeeccccccchhhhhhhHHHHHHHHHHHhHHhhHhcccccCCchHHHHHHHHHHHHHHHHHH---hh-----hhHHHHH
Q 041759 102 TIISEWGLECSSAFIKGLPAASHFTGCLLGIVFLATLADSSLGRKNLLFLSCLTMSVATSLTI---FS-----NNLWIYS 173 (525)
Q Consensus 102 ~i~~~~~~~~~s~~~~g~~~s~~~lg~~~~~~~~G~l~dr~~Grk~~~~~~~~~~~i~~~~~~---~~-----~~~~~l~ 173 (525)
.+.+++|+ +..+.|++.+++.++..+++++.|+++|| +|||+.++.+.+..+++..... +. +.+..++
T Consensus 28 ~~~~~~g~---s~~~~g~~~~~~~l~~~i~~~~~G~l~Dr-~grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 103 (396)
T TIGR00882 28 WLHDVNGL---SKTDTGIVFSCISLFSILFQPLFGLISDK-LGLKKHLLWIISGLLVLFAPFFIYVFGPLLQSNILVGAI 103 (396)
T ss_pred HHHHhcCC---CHHHHHHHHHHHHHHHHHHHHHHHHHHHH-hCcHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHH
Confidence 45667899 99999999999999999999999999999 9999999887776655443321 11 2334567
Q ss_pred HHHHHHhhcccchhhhhheeeEeeecCcchhhHHhHHHHHHHHHHHHHHHHHHhccCCchHHHHHHHHHHHHHHHhHhhe
Q 041759 174 LLRFFSGISRATIGTCTIVLLTEKVGTEWRGLVGILDSFFFTIGTLTLPAIAYTNRSSSWTIIYLWTSIPTLVYSGLLYI 253 (525)
Q Consensus 174 ~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~l~~~l~~~~~~~~wr~~f~~~~~~~~~~~~~~~~ 253 (525)
+.|++.|++.+...+....+..|.. +++++..+......++|.+++|.++..+...+||++|++.+++.++..++.+.
T Consensus 104 ~~~~~~g~~~~~~~~~~~~~~~~~~--~~~~~~~g~~~~~~~~g~~~g~~~~g~l~~~~~~~~f~~~~~~~~~~~~~~~~ 181 (396)
T TIGR00882 104 VGGLYLGFVFSAGAGAIEAYIEKVS--RNSNFEYGKARMFGCVGWALCASIAGILFSIDPQIVFWLGSGFALILMLLLMF 181 (396)
T ss_pred HHHHHHHHHhccchhhHHHHHHHhh--hhcccccchhhhhcccHHHHHHHHHhhhhccCchHHHHHHHHHHHHHHHHHHH
Confidence 7789999998888888777766643 33455677778888999999999977776779999999998888877634433
Q ss_pred eecCCchHhhhcCCHHHHHHHHHhhCCCcCCccchhhhhhhccCCCCcccccccccchhhhhhhhcchhHHHHHHHHHHH
Q 041759 254 FVSESPRWLFMQGRQEEAVEVIKSLSPIKDSNQLSLSLVSAVSFGHEPAASSKESSFLSSIRELFVRRWALERTLALMVP 333 (525)
Q Consensus 254 ~lpesp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~ 333 (525)
..||+|+. ++.++ . . ++ ++ ++++ ..+.++++|+|.++...+..+..
T Consensus 182 ~~~~~~~~-------~~~~~----~-~-~~---------------~~-~~~~-----~~~~~~~l~~~~~~~~~l~~~~~ 227 (396)
T TIGR00882 182 AKPKAPSS-------ATVAN----A-L-GA---------------NA-SAFS-----LKLALELFRQRKFWMFVLYVVGV 227 (396)
T ss_pred hCCCCchh-------hhhhc----c-c-cc---------------cc-CCCC-----HHHHHHHHcCCcHHHHHHHHHHH
Confidence 34443310 00000 0 0 00 00 0000 13567888888866555444433
Q ss_pred HHHHHHHHhhhhhccc----ccCChhHHHHHHHHHhcccccccCchhHHHHHHHHHhhcChhHHHHHHHHHHHHHHHHHH
Q 041759 334 GFGIGVVYYGMTLGIE----NLGFDIYLGVVFNALLEIPNLASTIPSFFLTFFLIQKWNRKSSLLVLFIISGICSIMAVV 409 (525)
Q Consensus 334 ~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~d~~g~~~~~~~~~~~~~~~~~~~~~ 409 (525)
...........+.+.+ +.+.+....+...++..+ ..+++.+..+++.||+|+|+.+.++..+.++...+...
T Consensus 228 ~~~~~~~~~~~~~y~~~~~~~~~~~~~~~g~~~~~~~i----~~~~~~~~~g~l~~r~g~~~~l~~~~~l~~l~~~~~~~ 303 (396)
T TIGR00882 228 ACVYDVFDQQFANFFTSFFATPQQGTRVFGYVTTMGEL----LNALIMFCAPLIINRIGAKNALLIAGTIMSVRIIGSSF 303 (396)
T ss_pred HHHHHHHHHHHHHHHHHhccccccchHHHHHHHHHHHH----HHHHHHHHHHHHHHHhccchhHHHHHHHHHHHHHHHHh
Confidence 3332222212233322 224444445555555444 55578889999999999999999888888877766554
Q ss_pred hccccccchhHHHHHHHHHHHHHHHHHHHHHhhhccccCcchhhhhhHH-HHHHHHHHHHHHHHHHhh--ccCchhHHHH
Q 041759 410 ANDISNAGKRMRIGLELASLFSAYIAYTVIFIYAIELFPTCVRNSATSI-MRLAIIFAAIFSSVLVAA--GSNNEFVSYG 486 (525)
Q Consensus 410 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~r~~~~~~-~~~~~~~g~~~~p~i~~~--~~~~~~~~~~ 486 (525)
..+. + ..++..++.+.+..........+..+..|++.+++..+. .+....+|+.++|.+.|+ +..++...|.
T Consensus 304 ~~~~----~-~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~at~~~~~~~~~~~lg~~~~~~l~G~l~~~~G~~~~f~ 378 (396)
T TIGR00882 304 ATTA----L-EVVILKMLHAFEVPFLLVGCFKYITSQFDVRLSATIYLIGFQFAKQLAMIFLSTLAGNMYDSIGFQGAYL 378 (396)
T ss_pred cCCh----H-HHHHHHHHHHHHHHHHHHHHHHHHHHhCCcceEEEeehHHHHHHHHHHHHHHHHhHHHHHHhcccHHHHH
Confidence 3333 3 345555566665555545556677777888888887766 567789999999999985 3346778888
Q ss_pred HHHHHHHHHHHHH
Q 041759 487 VFGLVIICCGFFV 499 (525)
Q Consensus 487 ~~~~~~~~~~~~~ 499 (525)
+.+++.++..++.
T Consensus 379 ~~~~~~~i~~~~~ 391 (396)
T TIGR00882 379 VLGCIVLLFTLIS 391 (396)
T ss_pred HHHHHHHHHHHHH
Confidence 8777776665543
No 86
>TIGR00806 rfc RFC reduced folate carrier. Proteins of the RFC family are so-far restricted to animals. RFC proteins possess 12 putative transmembrane a-helical spanners (TMSs) and evidence for a 12 TMS topology has been published for the human RFC. The RFC transporters appear to transport reduced folate by an energy-dependent, pH-dependent, Na+-independent mechanism. Folate:H+ symport, folate:OH- antiport and folate:anion antiport mechanisms have been proposed, but the energetic mechanism is not well defined.
Probab=99.94 E-value=3.2e-25 Score=211.27 Aligned_cols=352 Identities=12% Similarity=0.059 Sum_probs=227.2
Q ss_pred ccceeeccccccchhhh-hhhHHHHHHHHHHHhHHhhHhcccccCCchHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHH
Q 041759 100 ALTIISEWGLECSSAFI-KGLPAASHFTGCLLGIVFLATLADSSLGRKNLLFLSCLTMSVATSLTIFSNNLWIYSLLRFF 178 (525)
Q Consensus 100 ~~~i~~~~~~~~~s~~~-~g~~~s~~~lg~~~~~~~~G~l~dr~~Grk~~~~~~~~~~~i~~~~~~~~~~~~~l~~~r~l 178 (525)
.|.+.+|+|+ ++.+ .|.+.+++..+++++++++|+++|| +|.|+++.++.+.+++.+++.+++++++.+.+.|++
T Consensus 49 ~p~L~~elgl---T~~qv~G~I~s~F~ysYal~qIp~GlLaDr-lG~K~vL~l~~l~Wsl~t~L~~fa~Sl~~L~i~R~l 124 (511)
T TIGR00806 49 TPYLLTVLNF---TEETVTNEIIPVLPYSHLAVLVPVFLLTDY-LRYKPVLVLQALSFVCVWLLLLLGTSVWHMQLMEVF 124 (511)
T ss_pred HHHHHHHcCC---CHHHhcchHHHHHHHHHHHHHHHHHHHHHH-hCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 7899999999 9999 9999999999999999999999999 999999999999999999999999999999999999
Q ss_pred HhhcccchhhhhheeeEeeecCcchhhHHhHHHHHHHHHHHHHHHHHHhccCCchHHHHHHH--HHHHHHHHhHhheeec
Q 041759 179 SGISRATIGTCTIVLLTEKVGTEWRGLVGILDSFFFTIGTLTLPAIAYTNRSSSWTIIYLWT--SIPTLVYSGLLYIFVS 256 (525)
Q Consensus 179 ~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~l~~~l~~~~~~~~wr~~f~~~--~~~~~~~~~~~~~~lp 256 (525)
.|++.|... ....++..|+|+++|+++.++..++..+|.+++++++.++..+|||+.+.+. ...+..+.++..+++|
T Consensus 125 lGvaEA~~~-A~~syI~~WfP~kER~ratsi~~sg~~vG~~Ia~~L~qll~s~gWr~y~~Ln~Isl~s~~~a~~~a~~LP 203 (511)
T TIGR00806 125 YSVTMAARI-AYSSYIFSLVPPSRYQRAAAYSRAAVLLGVFLSSVLGQLLVTLGWISYSTLNIISLVFMTFSVFLALFLK 203 (511)
T ss_pred HHHHHHHHH-HHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCchhHHHHHHHHHHHHHHHHHHHHhCC
Confidence 999999998 9999999999999999999999999999999999885557778999855332 2223333336677888
Q ss_pred CCchHhhhcCCHHHHHHHHHhhCCCcCCccchhhhhhhccCCCCccccccc---ccchhhhhhhhcchhHHHHHHHHHHH
Q 041759 257 ESPRWLFMQGRQEEAVEVIKSLSPIKDSNQLSLSLVSAVSFGHEPAASSKE---SSFLSSIRELFVRRWALERTLALMVP 333 (525)
Q Consensus 257 esp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~l~~~~~~~~~~~~~~~~ 333 (525)
..++-+.-+++.+.......+. ++. .+.+. . +..+..+..+. ......+++..++|.+....+--.+.
T Consensus 204 ~~~~sl~f~~~~~~~~~~~~~~---~~~--~~~~~---~-~~~~~~~~~~~~~~~~l~~~~~~~y~n~~vl~WSlWwa~a 274 (511)
T TIGR00806 204 RPKRSLFFNRLEDVRGALPCEL---DQM--VPGPG---G-KLEDYLGTCRDSFLVRMLSELVTIYRNPQLLLWSLWWVFN 274 (511)
T ss_pred CCchhhhhcccccccccccccc---ccC--CCCCc---c-ccchhhhhhhhHHHHHHHHHHHHHhcCcchhhhhHHHHHH
Confidence 6554332222111000000000 000 00000 0 00000000000 11123455567777655544444444
Q ss_pred HHHHHHHHhhhhhcccccCCh-hHHHHHHHHHhcccccccCchhHHHHHHHHHhhcChhHHHHHHHHHHHHHHHHHHhcc
Q 041759 334 GFGIGVVYYGMTLGIENLGFD-IYLGVVFNALLEIPNLASTIPSFFLTFFLIQKWNRKSSLLVLFIISGICSIMAVVAND 412 (525)
Q Consensus 334 ~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~d~~g~~~~~~~~~~~~~~~~~~~~~~~~ 412 (525)
..+...+.++...+-++...+ ...++..-++..+ .+.+..+..|++-.++.+...+.++.....-+.+++.....
T Consensus 275 ~~g~~qv~~Y~Q~LW~~v~~~~~~yNG~veA~~tl----lga~~a~~ag~~~~~w~~~~~l~l~v~s~~~~gll~~m~~t 350 (511)
T TIGR00806 275 SAGYYLITYYVHTLWGTLDESLNKYNGAVDAASTL----LGAITSFIAGFVNIRWARWSKLLIAVVSAIQAGLVFWMSQS 350 (511)
T ss_pred hhHHHHHHHHHHHHHHHcCCCccccCCHHHHHHHH----HHHHHHHHHHhhcCCchhhHHHHHHHHHHHHHHHhhhhhcc
Confidence 444444333333322222111 1123333233222 33367777887755554433333333332222222222222
Q ss_pred ccccchhHHHHHHHHHHHHHHHHHHHHHhhhccccCcchhhhhhHHHHHHHHHHHHHHHH
Q 041759 413 ISNAGKRMRIGLELASLFSAYIAYTVIFIYAIELFPTCVRNSATSIMRLAIIFAAIFSSV 472 (525)
Q Consensus 413 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~r~~~~~~~~~~~~~g~~~~p~ 472 (525)
. +.+..++..+++...+....++...-++.....+.-|..+|+++++..+-+.+-.+
T Consensus 351 ~---~Iw~~Y~~yvlf~~~y~flitia~~~iA~~L~~~~~aLvFGiNtfvAl~LQtilT~ 407 (511)
T TIGR00806 351 H---DIWVLYVTYVLFRGIYQFLVPIATFQIASSLSKELCALVFGINTFVATALKTIITA 407 (511)
T ss_pred c---chHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccceEEEEecHHHHHHHHHHheEE
Confidence 1 24578888888888888888888888888877777799999998877555554433
No 87
>PF05977 MFS_3: Transmembrane secretion effector; InterPro: IPR010290 This family consists of the enterobactin exporter EntS proteins and putative permeases all belonging to the major facilitator superfamily. EntS exports the siderophore enterobactin out of the cell. The genetic locus entS was changed from ybdA so as to reflect its relevant biological function [].
Probab=99.93 E-value=7.4e-24 Score=211.77 Aligned_cols=341 Identities=16% Similarity=0.131 Sum_probs=258.5
Q ss_pred hhhhhhhHHHHHHHHHHHhHHhhHhcccccCCchHHHHHHHHHHHHHHHHHHhh-----hhHHHHHHHHHHHhhcccchh
Q 041759 113 SAFIKGLPAASHFTGCLLGIVFLATLADSSLGRKNLLFLSCLTMSVATSLTIFS-----NNLWIYSLLRFFSGISRATIG 187 (525)
Q Consensus 113 s~~~~g~~~s~~~lg~~~~~~~~G~l~dr~~Grk~~~~~~~~~~~i~~~~~~~~-----~~~~~l~~~r~l~G~~~~~~~ 187 (525)
|+...+++..+..+...+.++++|.++|| +.||++++.+.++.++..+..++. .+.|.+++.-++.|++.+...
T Consensus 43 S~~~valv~~a~~LP~~Llsl~aG~laDr-~drrrili~~~~~~~~~~~~L~~l~~~~~~~~~~Ll~~~fl~g~~~a~~~ 121 (524)
T PF05977_consen 43 SPLMVALVQAASTLPILLLSLFAGALADR-FDRRRILILSQLLRALVALLLAVLAFFGLLSPWLLLILTFLLGIGSAFFN 121 (524)
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHhhc-ccchHHHHHHHHHHHHHHHHHHHHHHhCcCCHHHHHHHHHHHHHHHHHHH
Confidence 88999999999999999999999999999 999999999998877665554432 478899999999999999999
Q ss_pred hhhheeeEeeecCcchhhHHhHHHHHHHHHHHHHHHHHH-hccCCchHHHHHHHHHHHHHHHhHhheeecCCchHhhhcC
Q 041759 188 TCTIVLLTEKVGTEWRGLVGILDSFFFTIGTLTLPAIAY-TNRSSSWTIIYLWTSIPTLVYSGLLYIFVSESPRWLFMQG 266 (525)
Q Consensus 188 ~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~l~~~l~~-~~~~~~wr~~f~~~~~~~~~~~~~~~~~lpesp~~~~~~~ 266 (525)
|...+++.|..|+++...+.++.+...++..++||.++. ++...|-.+.|.+.++..++.. ......+..+. ++
T Consensus 122 PA~~A~ip~lV~~~~L~~A~al~s~~~niar~iGPalgG~Lva~~G~~~~f~inalsfl~~i-~~l~~~~~~~~----~~ 196 (524)
T PF05977_consen 122 PAWQAIIPELVPKEDLPAANALNSISFNIARIIGPALGGILVAFFGAAAAFLINALSFLISI-LALLRWKPPPP----PS 196 (524)
T ss_pred HHHHHHHHHhccHhhHHHHHHHHHHHHHHHHhccchHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHcccccc----cc
Confidence 999999999999999999999999999999999999954 4556788889988887666655 33333322110 00
Q ss_pred CHHHHHHHHHhhCCCcCCccchhhhhhhccCCCCcccccccccchhhhhhhhcchhHHHHHHHHHHHHHHHHHHHhhhhh
Q 041759 267 RQEEAVEVIKSLSPIKDSNQLSLSLVSAVSFGHEPAASSKESSFLSSIRELFVRRWALERTLALMVPGFGIGVVYYGMTL 346 (525)
Q Consensus 267 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 346 (525)
+ ...++..+.+ ...++.+.++|.++..++..++..+........+|+
T Consensus 197 ~-~~~e~~~~~l--------------------------------~~G~ryv~~~~~l~~~l~~~~~~~l~~~a~~aLlPl 243 (524)
T PF05977_consen 197 S-LPRERFFSAL--------------------------------REGLRYVRSSPPLRSVLLRSFLFNLFASAVWALLPL 243 (524)
T ss_pred c-cchhhhhhhH--------------------------------HHHHHHHhcchHHHHHHHHHHHHHHhhhHHHHhhhH
Confidence 0 0000111111 135666677777665555455544444444445676
Q ss_pred ccc-ccCChhHHHHHHHHHhcccccccCchhHHHHHHHHHhhcChhHHHHHHHHHHHHHHHHHHhccccccchhHHHHHH
Q 041759 347 GIE-NLGFDIYLGVVFNALLEIPNLASTIPSFFLTFFLIQKWNRKSSLLVLFIISGICSIMAVVANDISNAGKRMRIGLE 425 (525)
Q Consensus 347 ~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~d~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 425 (525)
+.+ .++.+....+++.+..++ |+++|.++.+++.+|+++++++..+.++.+++.+.+.+..+. +...+..
T Consensus 244 ~a~~~l~~~a~~yGll~a~~gv----Gai~Gal~~~~l~~~~~~~~lv~~~~~~~a~~~~~lal~~~~-----~~~~~~l 314 (524)
T PF05977_consen 244 FARDVLGGGASGYGLLLAAFGV----GAILGALLLPRLRRRLSSRRLVLLASLLFALALLLLALSPSF-----WLALIAL 314 (524)
T ss_pred HHHHHhCCcHHHHHHHHHHHHH----HHHHHHHHHHHhhcccCcchhhHHHHHHHHHHHHHHhcchHH-----HHHHHHH
Confidence 664 478888888888888888 899999999999999999888888888888887777666544 3566677
Q ss_pred HHHHHHHHHHHHHHHhhhccccCcchhhhhhHHHHHHHHHHHHHHHHHHhh--ccCchhHHHHHHHHHHHHHHHHHHh
Q 041759 426 LASLFSAYIAYTVIFIYAIELFPTCVRNSATSIMRLAIIFAAIFSSVLVAA--GSNNEFVSYGVFGLVIICCGFFVIC 501 (525)
Q Consensus 426 ~~~~~~~~~~~~~~~~~~~~~~p~~~r~~~~~~~~~~~~~g~~~~p~i~~~--~~~~~~~~~~~~~~~~~~~~~~~~~ 501 (525)
++.|++.........+...+..|++.||+++++..+....+..+|.++.|. ...+....+.+.+++.+++.++...
T Consensus 315 ~l~G~~~~~~~~~~~t~~Q~~~P~~~~GRv~si~~~~~~g~~~lGsll~G~la~~~g~~~al~~a~~~lll~~~~~~~ 392 (524)
T PF05977_consen 315 FLAGAAWIIANSSLNTLVQLSVPDWVRGRVFSIYQMVFFGGMPLGSLLWGFLADHFGVRTALLIAGAALLLSALIALR 392 (524)
T ss_pred HHHHHHHHHHHHHHHHHHHHhCCHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHH
Confidence 778888888888888999999999999999999999998888888888885 3335555666666555555554433
No 88
>PRK10207 dipeptide/tripeptide permease B; Provisional
Probab=99.93 E-value=6.5e-24 Score=213.01 Aligned_cols=384 Identities=10% Similarity=0.003 Sum_probs=236.8
Q ss_pred ccceeeccccccchhhhhhhHHHHHHHHHHHhHHhhHhcccccCCchHHHHHHHHHHHHHHHHHHhhhhHHH-HHHHHHH
Q 041759 100 ALTIISEWGLECSSAFIKGLPAASHFTGCLLGIVFLATLADSSLGRKNLLFLSCLTMSVATSLTIFSNNLWI-YSLLRFF 178 (525)
Q Consensus 100 ~~~i~~~~~~~~~s~~~~g~~~s~~~lg~~~~~~~~G~l~dr~~Grk~~~~~~~~~~~i~~~~~~~~~~~~~-l~~~r~l 178 (525)
...+++++|+ +..+.+++.+.+.....+..+++|+++||++||||+++++.+++++++++++++.+... ++++|++
T Consensus 38 ~~yl~~~lg~---~~~~a~~i~~~~~~~~~~~~~~~G~laDr~~G~r~~~~~g~~~~~~g~~~~~~~~~~~~ll~~~~~l 114 (489)
T PRK10207 38 AVFFVKQLGF---SQEQAFITFGAFAALVYGLISIGGYVGDHLLGTKRTIVLGAIVLAIGYFMTGMSLLKPDLIFIALGT 114 (489)
T ss_pred HHHHHHHcCC---CHHHHHHHHHHHHHHHHHHHhhHHHhhhhccchHHHHHHHHHHHHHHHHHHHHhccchhHHHHHHHH
Confidence 4456778999 99999999999998888889999999997479999999999999999999999876554 5589999
Q ss_pred HhhcccchhhhhheeeEeeecCc--chhhHHhHHHHHHHHHHHHHHHH-HHhccCCchHHHHHHHHHHHHHHHhHhheee
Q 041759 179 SGISRATIGTCTIVLLTEKVGTE--WRGLVGILDSFFFTIGTLTLPAI-AYTNRSSSWTIIYLWTSIPTLVYSGLLYIFV 255 (525)
Q Consensus 179 ~G~~~~~~~~~~~~~i~~~~~~~--~r~~~~~~~~~~~~~G~~l~~~l-~~~~~~~~wr~~f~~~~~~~~~~~~~~~~~l 255 (525)
+|+|.|...+...+++.|.+|++ +|+++++++..+.++|.++||.+ +++.+..|||+.|++.++..++.. +.+.+.
T Consensus 115 ~~ig~g~~~~~~~~li~~~~p~~~~~~~~~~~~~~~~~nig~~~g~~l~g~l~~~~gw~~~F~i~~i~~~~~~-~~~~~~ 193 (489)
T PRK10207 115 IAVGNGLFKANPASLLSKCYPPKDPRLDGAFTLFYMSINIGSLISLSLAPVIADKFGYSVTYNLCGAGLIIAL-LVYFAC 193 (489)
T ss_pred HHhccccccCCHHHHHHHhcCCCchhhhcchhHHHHHHHHHHHHHHHHHHHHHHhhChHHHHHHHHHHHHHHH-HHHHHc
Confidence 99999999999999999999876 45778999999999999999988 566667899999998755333333 333333
Q ss_pred cCCchHhh--hcCCHHHHHHHHH----------hhCCCcCCccchhhhhhhc---cCCCCcccccccccchhhhhhhhcc
Q 041759 256 SESPRWLF--MQGRQEEAVEVIK----------SLSPIKDSNQLSLSLVSAV---SFGHEPAASSKESSFLSSIRELFVR 320 (525)
Q Consensus 256 pesp~~~~--~~~~~~~~~~~~~----------~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~l~~~ 320 (525)
++..+... .+++..+...... ......+............ ....-.. +++ ...+++|+
T Consensus 194 ~~~~~~~~~~~~~~~~d~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~f~~-~~~------~~~~~~r~ 266 (489)
T PRK10207 194 RGMVKDIGSEPDHKPMSFSKLLLVLLGSVVMIFVCAWLMHNVEVANLVLIVLSIVVTIIFFR-EAF------KLDKTGRN 266 (489)
T ss_pred chhhcccCCCCCccchhhhhHHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHH-HHh------cCCHHHHH
Confidence 32211000 0000000000000 0000000000000000000 0000000 000 00123444
Q ss_pred hhHHHHHHH--HHHHHHHHHHHHhhhhhcccc-c-----CCh--hHHHHHHHHHhcccccccCchhHHHHHHHHHhhcCh
Q 041759 321 RWALERTLA--LMVPGFGIGVVYYGMTLGIEN-L-----GFD--IYLGVVFNALLEIPNLASTIPSFFLTFFLIQKWNRK 390 (525)
Q Consensus 321 ~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~-~-----~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~d~~g~~ 390 (525)
+.+....+. ..+.+.......+.++.+.++ . |.. +.....+..+. .++..++.+++.||+++|
T Consensus 267 r~~~~~~l~~~~~~f~~~~~q~~~~l~l~~~~~~~~~~~G~~i~~~~~~~~n~~~-------iii~~pl~~~l~~rl~~r 339 (489)
T PRK10207 267 KMFVAFVLMLEAVVFYILYAQMPTSLNFFAINNVHHEILGFSINPVSFQALNPFW-------VVVASPILAGIYTHLGSK 339 (489)
T ss_pred HHHHHHHHHHHHHHHHHHHHHcccHHHHHHHHhccccccceEECHHHHHhHhHHH-------HHHHHHHHHHHHHHHhhC
Confidence 432221111 222223333333444444432 2 211 22222222232 336777788999999988
Q ss_pred hH-------HHHHHHHHHHHHHHHH-----HhccccccchhHHHHHHHHHHHHHHHHHHHHHhhhccccCcchhhhhhHH
Q 041759 391 SS-------LLVLFIISGICSIMAV-----VANDISNAGKRMRIGLELASLFSAYIAYTVIFIYAIELFPTCVRNSATSI 458 (525)
Q Consensus 391 ~~-------~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~r~~~~~~ 458 (525)
+. +.+++++.+++++.+. ........+.++.+...++.+++.....+...+++.+..|++.++.++|+
T Consensus 340 ~~~~~~~~k~~~G~~l~~~~~~~~~~~~~~~~~~~~~~s~~~~i~~~~l~g~Ge~~~~~~g~~~~~~~aP~~~~g~~~g~ 419 (489)
T PRK10207 340 GKDLSMPMKFTLGMFLCSLGFLTAAAAGMWFADAQGLTSPWFIVLVYLFQSLGELFISALGLAMIAALVPQHLMGFILGM 419 (489)
T ss_pred CCCCCcHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCccCHHHHHHHHHHHHHHHHHHhHHHHHHHHHhChHHHHHHHHHH
Confidence 63 6677777776665432 11111112344566788888999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHhhcc-----------C-chhHHHHHHHHHHHHHHHHHHh
Q 041759 459 MRLAIIFAAIFSSVLVAAGS-----------N-NEFVSYGVFGLVIICCGFFVIC 501 (525)
Q Consensus 459 ~~~~~~~g~~~~p~i~~~~~-----------~-~~~~~~~~~~~~~~~~~~~~~~ 501 (525)
.+....+|+.++..+..... . .+...|...++..+++.++.+.
T Consensus 420 ~~l~~~ig~~lg~~l~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~v~~~~ 474 (489)
T PRK10207 420 WFLTQAAAFLLGGYVATFTAVPDNITDPLETLPVYTNVFGKIGLVTLGVAVVMAL 474 (489)
T ss_pred HHHHHHHHHHHHHHHHHHhccccccccchhhhhhHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999998887775210 1 1345566666555555444433
No 89
>COG0738 FucP Fucose permease [Carbohydrate transport and metabolism]
Probab=99.93 E-value=6.6e-24 Score=195.31 Aligned_cols=319 Identities=14% Similarity=0.101 Sum_probs=251.7
Q ss_pred ccceeeccccccchhhhhhhHHHHHHHHHHHhHHhhHhcccccCCchHHHHHHHHHHHHHHHHHH---hhhhHHHHHHHH
Q 041759 100 ALTIISEWGLECSSAFIKGLPAASHFTGCLLGIVFLATLADSSLGRKNLLFLSCLTMSVATSLTI---FSNNLWIYSLLR 176 (525)
Q Consensus 100 ~~~i~~~~~~~~~s~~~~g~~~s~~~lg~~~~~~~~G~l~dr~~Grk~~~~~~~~~~~i~~~~~~---~~~~~~~l~~~r 176 (525)
.|.+++.|++ +..+.+++...++.|+.+++++.|++.+| +|+|+.+++|+.++++++.+.. -..++..++++-
T Consensus 36 ip~l~~~f~l---s~~~a~liqfaff~gYf~~~lpa~~~~kk-~gyk~gi~lgL~l~avg~~lF~pAa~~~~y~~FL~~l 111 (422)
T COG0738 36 IPHLKEVFDL---TYFEASLIQFAFFGGYFIMSLPAGLLIKK-LGYKAGIVLGLLLYAVGAALFWPAASSKSYGFFLVAL 111 (422)
T ss_pred HHHHHHHhCc---cHHHHHHHHHHHHHHHHHHhccHHHHHHH-hhhHHHHHHHHHHHHHHHHHHhhhhhhhhHHHHHHHH
Confidence 8999999999 99999999999999999999999999999 9999999999999999999885 457899999999
Q ss_pred HHHhhcccchhhhhheeeEeeecCcchhhHHhHHHHHHHHHHHHHHHHH-Hhcc-------------------CCchHHH
Q 041759 177 FFSGISRATIGTCTIVLLTEKVGTEWRGLVGILDSFFFTIGTLTLPAIA-YTNR-------------------SSSWTII 236 (525)
Q Consensus 177 ~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~l~~~l~-~~~~-------------------~~~wr~~ 236 (525)
++.|.|.+...+.+..+++...++++..+.+++.+.++++|.+++|+++ +++. ...|+++
T Consensus 112 Fila~Gi~~LetaaNp~v~~lg~~~~a~~rlnl~q~fn~lGa~~gp~~g~~lils~~~~~~~~~~~~~~~~~~~~~v~~p 191 (422)
T COG0738 112 FILASGIGLLETAANPYVTLLGKPESAAFRLNLAQAFNGLGAILGPLLGSSLILSGVALTMSAAQILAIKGADASSVQFP 191 (422)
T ss_pred HHHHhhhHHHHhccchHHHHhCCchhHHHHHHHHHHhhhhHHHHHHHHHHHHHHhhhhhccCHHHHHHHHHHHHHhhhhH
Confidence 9999999999999999999999998899999999999999999999984 4332 1247888
Q ss_pred HHHHHHHHHHHHhHhheee--cCCchHhhhcCCHHHHHHHHHhhCCCcCCccchhhhhhhccCCCCcccccccccchhhh
Q 041759 237 YLWTSIPTLVYSGLLYIFV--SESPRWLFMQGRQEEAVEVIKSLSPIKDSNQLSLSLVSAVSFGHEPAASSKESSFLSSI 314 (525)
Q Consensus 237 f~~~~~~~~~~~~~~~~~l--pesp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 314 (525)
|...+...+++. +..... |+.+. ..+++ . ++ + +...
T Consensus 192 Yl~~~~~lvll~-v~~~~~k~p~~~~-----~~~~~------------------------------~---~~--~-~~~~ 229 (422)
T COG0738 192 YLILAGLLVLLA-VLILLSKLPDLQV-----AAPSL------------------------------G---AS--G-SAGL 229 (422)
T ss_pred HHHHHHHHHHHH-HHHHhccCCcCCc-----ccccc------------------------------c---cc--c-cchH
Confidence 888777776666 333222 22110 00000 0 00 0 0146
Q ss_pred hhhhcchhHHHHHHHHHHHHHHHHHHHhhhhhcccc-cCChhHHHHHHHHHhcccccccCchhHHHHHHHHHhhcChhHH
Q 041759 315 RELFVRRWALERTLALMVPGFGIGVVYYGMTLGIEN-LGFDIYLGVVFNALLEIPNLASTIPSFFLTFFLIQKWNRKSSL 393 (525)
Q Consensus 315 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~d~~g~~~~~ 393 (525)
.+++++|.++...+..++...........++.+..+ .|.+..++....+.... +.++|++++.++.+|+...+.+
T Consensus 230 ~~l~~~~~~~~gvl~~FlYVG~Eva~gsfl~~y~~~~~g~~~~~aa~~~s~~~~----~~~vGRFig~~lm~~~~~~k~L 305 (422)
T COG0738 230 SSLFQNKHLRLGVLAIFLYVGAEVAIGSFLVSYLEELLGLNEQQAAYYLSFFWV----GFMVGRFIGSALMSRIKPEKYL 305 (422)
T ss_pred HHHHhChHHHHHHHHHHHHHhHHHHHHHHHHHHHHhcCCccHHHHHHHHHHHHH----HHHHHHHHHHHHHHHhCHHHHH
Confidence 688999987777666666555544444444444444 78888888888887777 8889999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHhccccccchhHHHHHHHHHHHHHHHHHHHHHhhhccccCcchhhhhhHHHHHHHHHHHHHHHHH
Q 041759 394 LVLFIISGICSIMAVVANDISNAGKRMRIGLELASLFSAYIAYTVIFIYAIELFPTCVRNSATSIMRLAIIFAAIFSSVL 473 (525)
Q Consensus 394 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~r~~~~~~~~~~~~~g~~~~p~i 473 (525)
.+..++..+.++...+..+. +.+...++.+++.+..+|..++...+..| ++ ....|.......+|+.+.|.+
T Consensus 306 af~a~~~ill~~~~~l~~g~------v~~~~l~~ig~F~simfPTIfslal~~l~-~~-ts~~s~~l~maivGGAiiP~l 377 (422)
T COG0738 306 AFYALIAILLLLAVALIGGV------VALYALFLIGLFNSIMFPTIFSLALKNLG-EH-TSVGSGLLVMAIVGGAIIPPL 377 (422)
T ss_pred HHHHHHHHHHHHHHHHhcCh------HHHHHHHHHHHHhHHHHHHHHHHHHhccC-cc-ccccceeeeeheecchHHHHH
Confidence 98888888877777777665 56667778889999999999999999999 33 344444455667888899999
Q ss_pred Hhh
Q 041759 474 VAA 476 (525)
Q Consensus 474 ~~~ 476 (525)
.|+
T Consensus 378 ~G~ 380 (422)
T COG0738 378 QGV 380 (422)
T ss_pred HHH
Confidence 986
No 90
>KOG2615 consensus Permease of the major facilitator superfamily [General function prediction only]
Probab=99.93 E-value=2.7e-24 Score=195.07 Aligned_cols=325 Identities=16% Similarity=0.119 Sum_probs=216.8
Q ss_pred hhhhhhhHHHHHHHHHHHhHHhhHhcccccCCchHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHhhcccchhhhhhe
Q 041759 113 SAFIKGLPAASHFTGCLLGIVFLATLADSSLGRKNLLFLSCLTMSVATSLTIFSNNLWIYSLLRFFSGISRATIGTCTIV 192 (525)
Q Consensus 113 s~~~~g~~~s~~~lg~~~~~~~~G~l~dr~~Grk~~~~~~~~~~~i~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~ 192 (525)
+....|.+.|.|++++++.++.+|.++|| +|||++++++++..++..++.+++.|+..++++|++.|+..| ...+..+
T Consensus 66 ~~~yaGflGSsF~ilQ~~sS~~~G~~SD~-yGRkpvll~c~~~va~s~ll~~~S~~F~afv~aR~l~Gi~kg-nl~v~rA 143 (451)
T KOG2615|consen 66 SVFYAGFLGSSFSILQFISSPLWGCLSDR-YGRKPVLLACLIGVALSYLLWALSRNFAAFVLARFLGGIFKG-NLSVIRA 143 (451)
T ss_pred cchhhhhHhhHHHHHHHHhhhhhhhhhhh-hCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhccC-chHHHHH
Confidence 67789999999999999999999999999 999999999999999999999999999777778999999998 5677899
Q ss_pred eeEeeecCcchhhHHhHHHHHHHHHHHHHHHHHHhccCCc---hHHHH----HHHHHHHHHHHhHhheeecCCchHhhhc
Q 041759 193 LLTEKVGTEWRGLVGILDSFFFTIGTLTLPAIAYTNRSSS---WTIIY----LWTSIPTLVYSGLLYIFVSESPRWLFMQ 265 (525)
Q Consensus 193 ~i~~~~~~~~r~~~~~~~~~~~~~G~~l~~~l~~~~~~~~---wr~~f----~~~~~~~~~~~~~~~~~lpesp~~~~~~ 265 (525)
+++|.+++++|++.++..+..+++|.++||.+|..+..+. =+.+| ++..++.........+++|||-.. +
T Consensus 144 iisdV~sek~r~l~ms~v~~a~~lGfilGPmIGgyla~f~~~~g~~p~alP~~~v~i~a~~~v~~~~~~lpETL~~---r 220 (451)
T KOG2615|consen 144 IISDVVSEKYRPLGMSLVGTAFGLGFILGPMIGGYLAQFSSISGSYPFALPCLLVFILAAGDVTFFPWFLPETLPL---R 220 (451)
T ss_pred HHHhhcChhhccceeeeeehhhhcchhhcchhhhHHHhhHhhhccCchHHHHHHHHHHHHHHHHHHHHhCCccccc---h
Confidence 9999999999999999999999999999999966554311 11222 233333333222556788998421 1
Q ss_pred CCHHHHHHHHHhhCCCcCCccchhhhhhhccCCCCcccccccccchhhhhhhhcchhHHH-------HHHHHHHHHHHHH
Q 041759 266 GRQEEAVEVIKSLSPIKDSNQLSLSLVSAVSFGHEPAASSKESSFLSSIRELFVRRWALE-------RTLALMVPGFGIG 338 (525)
Q Consensus 266 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~-------~~~~~~~~~~~~~ 338 (525)
++.++.... .+..++..+..... . ..-....+|+.... ..+..+.......
T Consensus 221 k~~~~~~~~----------~~~~~~~~~~~~~~-~-----------~~~v~~lrn~p~~~~i~~~~i~~l~~~ly~~l~s 278 (451)
T KOG2615|consen 221 KRNDEHSTL----------QEAADDRLALLKFA-R-----------IFKVAALRNPPLLDFISVLRIFGLHYFLYLELFS 278 (451)
T ss_pred hhcccccch----------hhhhhhhhhhcchh-h-----------hhhhhhhcCccccchHHHHHHHHHHHHHHHHHHH
Confidence 111110000 00000000000000 0 00111233332211 1122222222222
Q ss_pred HHHhhhhhc-ccccCChhHHHHHHHHHhcccccccCchhHHHHHHHHHhhcC-----hhHHHHHHHHHHHHHHHHHHhcc
Q 041759 339 VVYYGMTLG-IENLGFDIYLGVVFNALLEIPNLASTIPSFFLTFFLIQKWNR-----KSSLLVLFIISGICSIMAVVAND 412 (525)
Q Consensus 339 ~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~d~~g~-----~~~~~~~~~~~~~~~~~~~~~~~ 412 (525)
...++...+ ...+|+++.+.+.+.+..++ .+.++.+.+..+..| +..+..+..++.-..+++.....
T Consensus 279 ~~~~t~~~l~~~rfg~ss~~~G~vl~~tGl-------~m~~~ql~~~~~l~~~~~~~~a~l~~~l~~~vP~~llls~~~~ 351 (451)
T KOG2615|consen 279 GLENTVLFLTHGRFGYSSMQQGKVLSTTGL-------LMLVIQLALVPILPRYKGNIKAVLLFSLLLIVPAFLLLSLART 351 (451)
T ss_pred HHHhhHHHhhcCccCCChhhheeeeehhhH-------HHHHHHHhccccccccccchhhHHHHHHHHHHHHHHHHhcccc
Confidence 222333333 35588888888877776666 555555555555433 33455555555555555555444
Q ss_pred ccccchhHHHHHHHHHHHHHHHHHHHHHhhhccccCcchhhhhhHHHHHHHHHHHHHHHHHHhh
Q 041759 413 ISNAGKRMRIGLELASLFSAYIAYTVIFIYAIELFPTCVRNSATSIMRLAIIFAAIFSSVLVAA 476 (525)
Q Consensus 413 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~r~~~~~~~~~~~~~g~~~~p~i~~~ 476 (525)
. ........+..+......+....+.....|.++||+.+|+....+.++.++||++.|.
T Consensus 352 ~-----~~l~~~s~l~sf~~A~~vt~Lt~Lv~~~~~~~qrG~~~Gi~~Sl~alaRaiGPlv~g~ 410 (451)
T KOG2615|consen 352 P-----VVLYLGSTLKSFSTASVVTCLTSLVHKYGPQSQRGTLNGIFRSLGALARAIGPLVSGV 410 (451)
T ss_pred c-----hhhhHHHHHHHHHHHHhhHHHHHHHHhcCCcccchHHHHHHHHHHHHHHHhhhhhhhe
Confidence 3 3566677777777777778889999999999999999999999999999999999984
No 91
>PTZ00207 hypothetical protein; Provisional
Probab=99.93 E-value=1.1e-23 Score=210.95 Aligned_cols=385 Identities=10% Similarity=0.012 Sum_probs=245.7
Q ss_pred ccceeeccccccchhhhhhhHHHHHHHHHHHhHHhhHhcccccCCchHHHHHHHHHHHHHHHHHHhh------hhHHHHH
Q 041759 100 ALTIISEWGLECSSAFIKGLPAASHFTGCLLGIVFLATLADSSLGRKNLLFLSCLTMSVATSLTIFS------NNLWIYS 173 (525)
Q Consensus 100 ~~~i~~~~~~~~~s~~~~g~~~s~~~lg~~~~~~~~G~l~dr~~Grk~~~~~~~~~~~i~~~~~~~~------~~~~~l~ 173 (525)
.+.+++++|+ +..+.+++.++. ....+++++.|++.|| +|||++++++.+++++++++++++ ++++.++
T Consensus 50 s~~L~~~lgl---s~~~l~~i~svg-~~~g~~~lp~G~L~Dr-~G~R~vllig~ll~~iG~ll~ala~~~~i~~s~~~l~ 124 (591)
T PTZ00207 50 SGAMQARYNL---TQRDLSTITTVG-IAVGYFLLPYSFIYDY-LGPRPIFVLSMTVFCLGTLLFALTFQEVIEGSVVRLS 124 (591)
T ss_pred HHHHHHHhCc---CHHHHHHHHHHH-HHHHHHHHHHHHHHHH-hCcHHHHHHHHHHHHHHHHHHHHHhcccccCcHHHHH
Confidence 6789999999 999999998874 4456678889999999 999999999999999999999997 6899999
Q ss_pred HHHHHHhhcccchhhhhheeeEeeecCcchhhHHhHHHHHHHHHHHH-HHHHHHhccCCchHHHHHHHHHHHHHHHhHhh
Q 041759 174 LLRFFSGISRATIGTCTIVLLTEKVGTEWRGLVGILDSFFFTIGTLT-LPAIAYTNRSSSWTIIYLWTSIPTLVYSGLLY 252 (525)
Q Consensus 174 ~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~l-~~~l~~~~~~~~wr~~f~~~~~~~~~~~~~~~ 252 (525)
+.|++.|+|.+...+.....+.+|+| ++||++.++...+.++|.++ +++...+.. .+|+..|++.+++.++..++.+
T Consensus 125 l~r~l~G~G~~~~~~~~~~~i~~~Fp-~~RG~a~Gi~~~~~gLGsaI~~~l~~~l~~-~~~~~~fl~l~vl~~vv~ll~~ 202 (591)
T PTZ00207 125 VYNGLMTLGCMLFDLGAVVTVLSVFP-SNRGAVVAIMKTFTGLGSAILGSIQLAFFS-DNTSAYFFFLMSFALVVGILAI 202 (591)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhCh-hhhHHHHHHHHHHHHHHHHHHHHHHHHHHH-HhHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999988888889999996 78999999999999999986 555544443 4799999998888888776666
Q ss_pred eeecCCc--hHhhhcCCHHHHHHHHHhhCCC-------------------------------------------------
Q 041759 253 IFVSESP--RWLFMQGRQEEAVEVIKSLSPI------------------------------------------------- 281 (525)
Q Consensus 253 ~~lpesp--~~~~~~~~~~~~~~~~~~~~~~------------------------------------------------- 281 (525)
.++++.| ++...+++.++.++..++..+.
T Consensus 203 ~~vr~p~~~~~~~~~~~~~~~~~~~~~~~~~~y~~q~~p~~~f~~~~~i~~~l~~yl~~~~~~~~~~~~~~~~~~~~~~v 282 (591)
T PTZ00207 203 VFMRLPPFHLTGYQEKHLDEEEKAQRLMRKGVYLKQKAPMWRFVYGFVILIILIVFLPLQGALVAYLKLGSNFKVGFAVT 282 (591)
T ss_pred hheeCCcchhhcccccCCCHHHHHHHhhhhhhhhhcCCCceehhhHHHHHHHHHHHHHHHHHHHHHhcccHHHHHHHHHH
Confidence 6665544 3332222111111111100000
Q ss_pred --------------------cCCc-cchhhhhhhcc---CCCCccc-----c-c-ccccchhhhhhhhcchhHHHHHHHH
Q 041759 282 --------------------KDSN-QLSLSLVSAVS---FGHEPAA-----S-S-KESSFLSSIRELFVRRWALERTLAL 330 (525)
Q Consensus 282 --------------------~~~~-~~~~~~~~~~~---~~~~~~~-----~-~-~~~~~~~~~~~l~~~~~~~~~~~~~ 330 (525)
.++. +.+.+..+..+ +..+.+. + + ...+...++++.+++..+|...+..
T Consensus 283 ~~~lll~~p~l~ip~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~~~~t~~q~l~~~d~Wll~~~~ 362 (591)
T PTZ00207 283 VIVLTVIFPFMAFPLTTFDGKRPHDDSDGKAKEHVEAGEEVSAAEDKVVETDVDYIAPQFQETFIEGLKTARLWCLLWSI 362 (591)
T ss_pred HHHHHHHHHHHhhhHHHhccCCcCCCccccccccccccccccccccccccccccCCCCCCcchHHHHHhchhHHHHHHHH
Confidence 0000 00000000000 0000000 0 0 0011123677777787777666555
Q ss_pred HHHHHHHHHHHhhhhhccccc-CChhHH--HHHHHHHhcccccccCchhHHHHHHHHHhhcC--------hhH-HHHHHH
Q 041759 331 MVPGFGIGVVYYGMTLGIENL-GFDIYL--GVVFNALLEIPNLASTIPSFFLTFFLIQKWNR--------KSS-LLVLFI 398 (525)
Q Consensus 331 ~~~~~~~~~~~~~~~~~~~~~-~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~l~d~~g~--------~~~-~~~~~~ 398 (525)
++.........+-+..+.+.+ |.+... ...+.++.++ ++.+|++.+|.+.....+ |.. +.+..+
T Consensus 363 ~cg~g~gl~~~~N~~qI~~sl~g~~~~~~~~~~~vsL~si----~~~~GRl~~g~~~~~~~~~~~~~r~prt~~l~~~~~ 438 (591)
T PTZ00207 363 FCCVGAHFVIIFNARFIYTALAGEAPDDALNTLLTVLNGV----GSAVGRLCMSYFEIWSQKRRAEDRVPITIALFIPSV 438 (591)
T ss_pred HHhhCchheeeecHHHHHHHhcCCCCCccceeeehhhhhH----HHHhhHHHHHHHHHHHHhhccccccchhHHHHHHHH
Confidence 544433333333334444555 442222 2225566666 555788888776622211 122 233333
Q ss_pred HHHHHHHHHHHhccccccchhHHHHHHHHHHHHHHHHHHHHHhhhccccCcchhhhhhHHHHHHHHHHHHHH-HHHHhh-
Q 041759 399 ISGICSIMAVVANDISNAGKRMRIGLELASLFSAYIAYTVIFIYAIELFPTCVRNSATSIMRLAIIFAAIFS-SVLVAA- 476 (525)
Q Consensus 399 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~r~~~~~~~~~~~~~g~~~~-p~i~~~- 476 (525)
+.+..+++..... ...+++..++.+++.|..+++....++|+|. ++-|+-.-+.....-+|+++. -.+.|.
T Consensus 439 -~~~~~lll~~~~p-----~~~L~~~~~lvg~~~G~~~~~~~~i~selFg-k~~g~~yN~~~~a~pigs~~~n~~l~G~~ 511 (591)
T PTZ00207 439 -CIITMLTLFLTLP-----KAALPLPYFIAAFANGFMAATIALVTRTIFA-KDPAKHYNFCFLGSVLSAIFLNRLLYGEW 511 (591)
T ss_pred -HHHHHHHHHHHCC-----ccHhHHHHHHHHHHhhHhHHHHHHHHHHHhc-cchHHHhhHHhHHHHHHHHHHHHHHHHHH
Confidence 5555444444422 1367888999999999999999999999999 776777777776666666654 334441
Q ss_pred -c-------------cCchhHHHHHHHHHHHHHHHHHHhc
Q 041759 477 -G-------------SNNEFVSYGVFGLVIICCGFFVICL 502 (525)
Q Consensus 477 -~-------------~~~~~~~~~~~~~~~~~~~~~~~~~ 502 (525)
+ ..-...+|.+++++++++.+....+
T Consensus 512 Yd~ea~k~~~~~C~G~~C~~~~~~v~~~~~~~g~~~s~~l 551 (591)
T PTZ00207 512 YTQQADKLGQDVCTERVCVVMPLAFLLGLSFLAFITSTYV 551 (591)
T ss_pred HHHHHhhCCCCeeCCceeeHhHHHHHHHHHHHHHHHHhhe
Confidence 0 1124578888888888887764443
No 92
>TIGR02718 sider_RhtX_FptX siderophore transporter, RhtX/FptX family. RhtX from Sinorhizobium meliloti 2011 and FptX from Pseudomonas aeruginosa appear to be single polypeptide transporters, from the major facilitator family (see pfam07690) for import of siderophores as a means to import iron. This function was suggested by proximity to siderophore biosynthesis genes and then confirmed by study of knockout and heterologous expression phenotypes.
Probab=99.92 E-value=2.8e-22 Score=197.82 Aligned_cols=370 Identities=9% Similarity=-0.040 Sum_probs=246.5
Q ss_pred HHHHHHHHHHHHHHHHHhhhcccCccccccCCCCCCCCCCCCCCCCCCceecCCCCccccceeeccccccchhhhhhhH-
Q 041759 42 AILVSLASLFDSQQSFISVYTEAEPTWHCLNNTTCSSASNICMFPKSSWAWDGNPTTTALTIISEWGLECSSAFIKGLP- 120 (525)
Q Consensus 42 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~c~~~~~~~~~~~~p~~~~~~i~~~~~~~~~s~~~~g~~- 120 (525)
.+.++..++..+......... +|.+.+|.|+ +..++|++
T Consensus 3 ~~~~~~ly~~~g~~~~~~~p~-------------------------------------lp~~l~~~g~---~~~~iGl~~ 42 (390)
T TIGR02718 3 VITLGLLYLSQGIPIGLAMDA-------------------------------------LPTLLREDGA---PLTALAFLP 42 (390)
T ss_pred HHHHHHHHHHHHhHHHHHHHH-------------------------------------HHHHHHHcCC---CHHHHHHHH
Confidence 345556677777777766666 8999999999 99999997
Q ss_pred -HHHHHHHHHHhHHhh-HhcccccCCchHHHHHHHHHH-HHHHHHHH---hhhh-HHHHHHHHHHHhhcccchhhhhhee
Q 041759 121 -AASHFTGCLLGIVFL-ATLADSSLGRKNLLFLSCLTM-SVATSLTI---FSNN-LWIYSLLRFFSGISRATIGTCTIVL 193 (525)
Q Consensus 121 -~s~~~lg~~~~~~~~-G~l~dr~~Grk~~~~~~~~~~-~i~~~~~~---~~~~-~~~l~~~r~l~G~~~~~~~~~~~~~ 193 (525)
.+.+.+...+.+++. ++..|| +||||.+++...+. ++.....+ ...+ ..+++..-++.++..+...+...++
T Consensus 43 ~~~l~~~~~~l~~p~~~~~~~~~-~g~r~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~d~~~d~~ 121 (390)
T TIGR02718 43 LVGLPWVVKFLWAPLVDNWWSWR-LGRRRSWVLPMQCLVSACLASLALVGPDVAGAGWAVGLLACASLASATQDIATDGM 121 (390)
T ss_pred HHHHHHHHHHHHHHHHhcccccc-CCcchhHHHHHHHHHHHHHHHHHcCCcchhhHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 467788888888888 447999 99999876655332 22222222 2222 3444555666777777788888888
Q ss_pred eEeeecCcchhhHHhHHHHHHHHHHHHHHHH-HHhccCCchHHHHHHHHHHHHHHHhHhheeecCCchHhhhcCCHHHHH
Q 041759 194 LTEKVGTEWRGLVGILDSFFFTIGTLTLPAI-AYTNRSSSWTIIYLWTSIPTLVYSGLLYIFVSESPRWLFMQGRQEEAV 272 (525)
Q Consensus 194 i~~~~~~~~r~~~~~~~~~~~~~G~~l~~~l-~~~~~~~~wr~~f~~~~~~~~~~~~~~~~~lpesp~~~~~~~~~~~~~ 272 (525)
..|..++++++...+....+..+|.++|+.. +++.+..|||..|++.+++.++..+..++..|++++ +++.++.
T Consensus 122 ~~~~~~~~~~~~~~~~~~~g~~lG~~~g~~~~~~l~~~~gw~~~f~~~a~l~~~~~~~~~~~~~~~~~----~~~~~~~- 196 (390)
T TIGR02718 122 AAEHFNGRTLAKGNAVQIAGVMIGFFGGGAGTLVLFGKFGQRPAFLLVACVPLASLVCVLWLKDRAVA----SPEAPLA- 196 (390)
T ss_pred HHHhCCHhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHcCCCCcC----ccccchh-
Confidence 8888888888888888888889999998876 566677899999999998887766343333333221 0000000
Q ss_pred HHHHhhCCCcCCccchhhhhhhccCCCCcccccccccchhhhhhhhcchhHHHHHHHHHHHHHHHHHHHhhhhhcccccC
Q 041759 273 EVIKSLSPIKDSNQLSLSLVSAVSFGHEPAASSKESSFLSSIRELFVRRWALERTLALMVPGFGIGVVYYGMTLGIENLG 352 (525)
Q Consensus 273 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 352 (525)
+ ..++++++|+|..+......++........+...+.+..+.|
T Consensus 197 --------------------------------~-----~~~~~~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~~~l~~~G 239 (390)
T TIGR02718 197 --------------------------------R-----RASLFRFFRRPLAWSLLALALLSAMTAVSGFGLSKLYLVDAG 239 (390)
T ss_pred --------------------------------h-----HHHHHHHHcCcCHHHHHHHHHHHHHHHHHHHHHhhHHHHhcC
Confidence 0 025667888887666665555555544444444566667789
Q ss_pred ChhHHHHHHHHHhcccccccCchhHHHHHHHHHhhcChhHHHHHHHHHHHHHHHHHHhccc-cccchhHHHHHHHHHHHH
Q 041759 353 FDIYLGVVFNALLEIPNLASTIPSFFLTFFLIQKWNRKSSLLVLFIISGICSIMAVVANDI-SNAGKRMRIGLELASLFS 431 (525)
Q Consensus 353 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~d~~g~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~ 431 (525)
.+....+.......+ +..+++.++.+++.||+|+|+.+..+..+..+..+........ .............+.+++
T Consensus 240 ~s~~~ig~~~~~~~~---~~~~~g~~~~g~l~~r~g~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 316 (390)
T TIGR02718 240 WPLEWIGRLGMAGGA---VTVLLGCGGGAWLVRRAGLWRTFILGVGLAGSLALLWFAQAAFWLAPGIAVAWSCSAFGSLI 316 (390)
T ss_pred CCHHHHHHHHhHHHH---HHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHcccCCcHHHHHHHHHHHHHH
Confidence 998888777655432 1344678899999999999999888776653333322221111 001111223333444555
Q ss_pred HHHHHHHHHhhhccccCc-chhhhhhHHHHHHHHHHHHHHHHHHhh--ccCchhHHHHHHHHHHHHHHH
Q 041759 432 AYIAYTVIFIYAIELFPT-CVRNSATSIMRLAIIFAAIFSSVLVAA--GSNNEFVSYGVFGLVIICCGF 497 (525)
Q Consensus 432 ~~~~~~~~~~~~~~~~p~-~~r~~~~~~~~~~~~~g~~~~p~i~~~--~~~~~~~~~~~~~~~~~~~~~ 497 (525)
.+...+.......+..++ +.+++.+++.+....+|..++|.+.|. +..++...|...+++.+++.+
T Consensus 317 ~g~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~lg~~~g~~~~G~l~~~~G~~~~f~~~~~~~l~a~~ 385 (390)
T TIGR02718 317 TGITSVAIYTAFMRFAGDGDQAGTDVTAVQSTRDLGELIASSIAGYLTDRFGYAGGFLSGTVLAVLAIL 385 (390)
T ss_pred HHHHHHHHHHHHHHHhCcccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHH
Confidence 666667777776677665 788999999999999999999999985 223555666666665555444
No 93
>KOG3764 consensus Vesicular amine transporter [Intracellular trafficking, secretion, and vesicular transport]
Probab=99.92 E-value=1.9e-24 Score=197.18 Aligned_cols=337 Identities=17% Similarity=0.087 Sum_probs=238.0
Q ss_pred hhhhhhhHHHHHHHHHHHhHHhhHhcccccCCchHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHhhcccchhhhhhe
Q 041759 113 SAFIKGLPAASHFTGCLLGIVFLATLADSSLGRKNLLFLSCLTMSVATSLTIFSNNLWIYSLLRFFSGISRATIGTCTIV 192 (525)
Q Consensus 113 s~~~~g~~~s~~~lg~~~~~~~~G~l~dr~~Grk~~~~~~~~~~~i~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~ 192 (525)
++.++|++.+++.+.+++.+++.|.+.|| +|+|-.+++|++++..++++.++.++++.++++|.+||+|.+...+...+
T Consensus 104 e~~~iG~LFaskA~~qllvnp~~G~l~~~-iGy~ipm~~Gl~vmf~sTilFafg~sy~~l~vAR~LQgvgsA~~~tsgla 182 (464)
T KOG3764|consen 104 ENTQIGLLFASKALVQLLVNPFFGNLIDR-IGYKIPMVAGLFVMFLSTILFAFGNSYPMLFVARSLQGVGSAFADTSGLA 182 (464)
T ss_pred cccchhHHHHHHHHHHHHhcccchhhHHH-hccccHHHHHHHHHHHHHHHHHHcchhHHHHHHHHHhhhhHHHHHhhhHH
Confidence 78999999999999999999999999999 99999999999999999999999999999999999999999999999999
Q ss_pred eeEeeecC-cchhhHHhHHHHHHHHHHHHHHHHHHhc-cCCchHHHHHHHHHHHHHHHhHhheeecCCchHhhhcCCHHH
Q 041759 193 LLTEKVGT-EWRGLVGILDSFFFTIGTLTLPAIAYTN-RSSSWTIIYLWTSIPTLVYSGLLYIFVSESPRWLFMQGRQEE 270 (525)
Q Consensus 193 ~i~~~~~~-~~r~~~~~~~~~~~~~G~~l~~~l~~~~-~~~~wr~~f~~~~~~~~~~~~~~~~~lpesp~~~~~~~~~~~ 270 (525)
+++|.+|+ ++|++++|+.-.+.++|.++||.+|.++ +..|.+.+|++.+++.++-..+..+.++.+.. +.++
T Consensus 183 mlAd~f~~d~er~~vmGialgfislG~lvgPpfGGilYe~~Gk~aPFlVL~~v~Lld~~L~l~vi~p~~~------~~~~ 256 (464)
T KOG3764|consen 183 MLADVFPEDNERGSVMGIALGFISLGVLVGPPFGGILYEFAGKSAPFLVLAIVLLLDGALQLLVIEPTEM------DPDS 256 (464)
T ss_pred HHHHHcccchhhhHHHHHHHHHHhccceecCCcccchHhhcCCcCcHHHHHHHHHHHHHHHHheeCcccc------Cccc
Confidence 99999986 4689999999999999999999996655 56799999999999999988454444443210 0000
Q ss_pred HHHHHHhhCCCcCCccchhhhhhhccCCCCcccccccccchhhhhhhhcchhHHHHHHHHHHHHHHHHHHHhhhhhcccc
Q 041759 271 AVEVIKSLSPIKDSNQLSLSLVSAVSFGHEPAASSKESSFLSSIRELFVRRWALERTLALMVPGFGIGVVYYGMTLGIEN 350 (525)
Q Consensus 271 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 350 (525)
. + + ..++++++++|..+........+..+..+.--.++.|+.+
T Consensus 257 ~--------------~------------------~-----~~~~~~Ll~dP~I~~~agai~~~n~~lafLePtlslwm~e 299 (464)
T KOG3764|consen 257 T--------------E------------------Q-----GTPMWSLLMDPYILLIAGAITFSNSSLAFLEPTLSLWMLE 299 (464)
T ss_pred c--------------c------------------c-----CccHHHHHhCchHhhhhcchhhccchHHHhCcccHHHHHH
Confidence 0 0 0 0367889999985554444444444444444444554433
Q ss_pred -cCChhHHHHHHHHHhcccccccCchhHHHHHHHHHhhc--ChhHHHHHHHHHHHHHHHHHHhccccccchhHHHHHHHH
Q 041759 351 -LGFDIYLGVVFNALLEIPNLASTIPSFFLTFFLIQKWN--RKSSLLVLFIISGICSIMAVVANDISNAGKRMRIGLELA 427 (525)
Q Consensus 351 -~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~d~~g--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 427 (525)
+. .+ .+..++..++..+..+++..+.|.+.||++ |......+.+...++...+.+.... ...++-.+.
T Consensus 300 ~m~-~p---~w~~G~~fLp~~~~y~ig~~lfg~la~k~~~~~wl~~~~gl~~~G~~~~~iP~~~~~-----~~L~vp~~~ 370 (464)
T KOG3764|consen 300 TMF-TP---GWEVGLAFLPASLSYAIGTNLFGKLADKYPHLRWLLSLGGLATVGVSSGPIPFATSI-----AQLWVPNFG 370 (464)
T ss_pred hcc-CC---CcceeeeecccccchhccCchHHHHHHhcCchhHHHHHHHHHHHHHHhchhHhhhhH-----HHHhhhhHH
Confidence 33 21 222344555555677799999999999999 5444444555555444444444333 222333333
Q ss_pred HHHHHHHHHHHHHhhhccccC---cc---hhhhhhHHHHHHHHHHHHHHHHHHhh--ccCchhHHHHHHHHHHHHHHHHH
Q 041759 428 SLFSAYIAYTVIFIYAIELFP---TC---VRNSATSIMRLAIIFAAIFSSVLVAA--GSNNEFVSYGVFGLVIICCGFFV 499 (525)
Q Consensus 428 ~~~~~~~~~~~~~~~~~~~~p---~~---~r~~~~~~~~~~~~~g~~~~p~i~~~--~~~~~~~~~~~~~~~~~~~~~~~ 499 (525)
.+++.+...........++.. .+ ..|...++......+|..++|.+.|. ...+..+...++++..++...+.
T Consensus 371 l~~~i~~~dasl~P~l~~lvd~rh~s~~~vYGsVyaIad~a~sla~a~GP~~gg~iv~~iGF~wl~~iig~~n~iyapvl 450 (464)
T KOG3764|consen 371 LGFGIGLADASLIPTLGYLVDPRHVSGFNVYGSVYAIADAAFSLAYAIGPTFGGSLVEAIGFEWLMTIIGILNLIYAPVL 450 (464)
T ss_pred HHHHHHHHHHHHhhhhHHhcchhhccccceeeeHHHHHHHHHHHhhhccccccchheeehhHHHHHHHHHHHHHHHHHHH
Confidence 333333333322222222222 22 45788888888889999999999995 34466777777777777666544
Q ss_pred Hhc
Q 041759 500 ICL 502 (525)
Q Consensus 500 ~~~ 502 (525)
.++
T Consensus 451 ~ll 453 (464)
T KOG3764|consen 451 LLL 453 (464)
T ss_pred HHH
Confidence 433
No 94
>TIGR00924 yjdL_sub1_fam amino acid/peptide transporter (Peptide:H+ symporter), bacterial. The model describes proton-dependent oligopeptide transporters in bacteria. This model is restricted in its range in recognizing bacterial proton-dependent oligopeptide transporters, although they are found in yeast, plants and animals. They function by proton symport in a 1:1 stoichiometry, which is variable in different species. All of them are predicted to contain 12 transmembrane domains, for which limited experimental evidence exists.
Probab=99.92 E-value=1.9e-22 Score=202.50 Aligned_cols=372 Identities=9% Similarity=-0.009 Sum_probs=231.0
Q ss_pred cccccchhhhhhhHHHHHHHHHHHhHHhhHhcccccCCchHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHhhcccch
Q 041759 107 WGLECSSAFIKGLPAASHFTGCLLGIVFLATLADSSLGRKNLLFLSCLTMSVATSLTIFSNNLWIYSLLRFFSGISRATI 186 (525)
Q Consensus 107 ~~~~~~s~~~~g~~~s~~~lg~~~~~~~~G~l~dr~~Grk~~~~~~~~~~~i~~~~~~~~~~~~~l~~~r~l~G~~~~~~ 186 (525)
+|+ +..+.|++.+.+.++..++++++|+++||++|||+++.++.++.+++.++.+++++++.++++|++.|+|.|..
T Consensus 43 lg~---s~~~ag~~~~~~~~~~~~~~~~~G~laDr~~G~~~~l~~~~~~~~~g~~~~~~~~~~~~~~~~~~l~g~g~g~~ 119 (475)
T TIGR00924 43 LGF---SQEQAFIIFGAYSALVYLLTSVGWWFGDRVWGTKKTMVLGGIVLMLGHFMLAMSIYPDLIFYGLGTIAVGSGLF 119 (475)
T ss_pred CCC---CHHHHHHHHHHHHHHHHHHHhhHHHHHHhhcchHHHHHHHHHHHHHHHHHHHhcccHhHHHHHHHHHHhccccc
Confidence 899 99999999999999999999999999998349999999999999999999999999999999999999999999
Q ss_pred hhhhheeeEeeecCcc---hhhHHhHHHHHHHHHHHHHHHH-HHhccCCchHHHHHHHHHHHHHHHhHhheeec----CC
Q 041759 187 GTCTIVLLTEKVGTEW---RGLVGILDSFFFTIGTLTLPAI-AYTNRSSSWTIIYLWTSIPTLVYSGLLYIFVS----ES 258 (525)
Q Consensus 187 ~~~~~~~i~~~~~~~~---r~~~~~~~~~~~~~G~~l~~~l-~~~~~~~~wr~~f~~~~~~~~~~~~~~~~~lp----es 258 (525)
.+...++++|++|+++ |+++++++..+.++|.++||.+ +++.+..+||+.|.+.++..++.. +.+++.+ +.
T Consensus 120 ~~~~~~~~a~~~~~~~~~~r~~~~~~~~~~~niG~~ig~~l~g~l~~~~g~~~~f~~~~~~~~~~~-l~~~~~~~~~~~~ 198 (475)
T TIGR00924 120 KANPSSMVGKLYERGDMPRRDGGFTLFYMSINIGSFISPLLAGVIAENYGYHVGFNLAAVGMVIGL-LTFFAGRHMLRDI 198 (475)
T ss_pred cCCHHHHHHHhcCCCCcccccceehhHHHHHHHHHHHHHHHHHHHHHhcChHHHHHHHHHHHHHHH-HHHHHcccccccC
Confidence 9999999999998754 8889999999999999999998 555566799999999876555443 3333322 22
Q ss_pred chHhhhcCCHHHHHHHHHhh----------CCC-cCCccchhhhh----------hhccCCCCcccccccccchhhhhhh
Q 041759 259 PRWLFMQGRQEEAVEVIKSL----------SPI-KDSNQLSLSLV----------SAVSFGHEPAASSKESSFLSSIREL 317 (525)
Q Consensus 259 p~~~~~~~~~~~~~~~~~~~----------~~~-~~~~~~~~~~~----------~~~~~~~~~~~~~~~~~~~~~~~~l 317 (525)
|+. ..+.+.++.+...... ... ...+....... .......++ + ....+-
T Consensus 199 ~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~-----~~~~~~ 268 (475)
T TIGR00924 199 GSV-PDPLSGQGKTYGKLLLALLAALALVFFCAWLMHHVVIANILLMTVTLAVIIFFFRLAFKP----R-----LDAVAR 268 (475)
T ss_pred CCC-CCCcchhhhhhHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHHHhc----c-----CCHHHH
Confidence 210 0000011000000000 000 00000000000 000000000 0 000000
Q ss_pred hcchhHHHHHHHHHHHHHHHHHHHhhhhhcccc-cCCh-------hHHHHHHHHHhcccccccCchhHHHHHHHHHhhcC
Q 041759 318 FVRRWALERTLALMVPGFGIGVVYYGMTLGIEN-LGFD-------IYLGVVFNALLEIPNLASTIPSFFLTFFLIQKWNR 389 (525)
Q Consensus 318 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~d~~g~ 389 (525)
.|...+....+...+.+.........++.+.++ .+.+ ......+.++..+ +..++..++..|.+|
T Consensus 269 ~~~~~~l~l~~~~~~~~~~~~Q~~s~l~l~~~~~~~~~~~~~~ip~~~~~~~n~~~ii-------l~~p~~~~~~~~l~~ 341 (475)
T TIGR00924 269 NKMYAYIVLFLEAVVFWVLYAQMPTSLNFFADNNMHHEMLGMSVPVIWFQSLNPFWVV-------VGSPVLAMIWTRLGR 341 (475)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHhccccccceEECHHHHHhhhHHHHH-------HHHHHHHHHHHHHHh
Confidence 111111222222333333333333434443322 2211 2223333333322 444443333333333
Q ss_pred -----hhHH--HHHHHHHHHHHHHHHHh----ccccccchhHHHHHHHHHHHHHHHHHHHHHhhhccccCcchhhhhhHH
Q 041759 390 -----KSSL--LVLFIISGICSIMAVVA----NDISNAGKRMRIGLELASLFSAYIAYTVIFIYAIELFPTCVRNSATSI 458 (525)
Q Consensus 390 -----~~~~--~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~r~~~~~~ 458 (525)
+... .++.++.+++++.+.+. ......+.++.+...++.+++.....|...++..+..|++.||+.+|+
T Consensus 342 ~~~~~~~~~k~~~G~~l~~~~~~~~~~~~~~~~~~~~~s~~~~i~~~~~~~~ge~~~~p~~~~~~~~~aP~~~~g~~~g~ 421 (475)
T TIGR00924 342 KGKDPTTPLKFTLGMLFCGASFLTFAASIWFADAGGLTSPWFMVLIYLFQTLGELMISPLGLSWWTKIAPQRLMGQMLGM 421 (475)
T ss_pred CCCCCCcHHHHHHHHHHHHHHHHHHHHHHhhcCCCCccCHHHHHHHHHHHHHHHHHHhHHHHHHHHHhCCHHHHHHHHHH
Confidence 3333 67777777777666542 110012355778888899999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHhh--ccCchhHHHHHHHHHHHHHHHHH
Q 041759 459 MRLAIIFAAIFSSVLVAA--GSNNEFVSYGVFGLVIICCGFFV 499 (525)
Q Consensus 459 ~~~~~~~g~~~~p~i~~~--~~~~~~~~~~~~~~~~~~~~~~~ 499 (525)
......+|..+++.+... ...+....|...+++.++..++.
T Consensus 422 ~~l~~~~g~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 464 (475)
T TIGR00924 422 WFLAQAMGSLLGGYLATFGAVPQGVTGVFGKIGLVTLLVGVVM 464 (475)
T ss_pred HHHHHHHHHHHHHHHHHHHhcccchhhHHHHHHHHHHHHHHHH
Confidence 999999999999888774 22234555666665555544444
No 95
>TIGR00805 oat sodium-independent organic anion transporter. Proteins of the OAT family catalyze the Na+-independent facilitated transport of organic anions such as bromosulfobromophthalein and prostaglandins as well as conjugated and unconjugated bile acids (taurocholate and cholate, respectively). These transporters have been characterized in mammals, but homologues are present in C. elegans and A. thaliana. Some of the mammalian proteins exhibit a high degree of tissue specificity. For example, the rat OAT is found at high levels in liver and kidney and at lower levels in other tissues. These proteins possess 10-12 putative a-helical transmembrane spanners. They may catalyze electrogenic anion uniport or anion exchange.
Probab=99.91 E-value=4.9e-24 Score=219.72 Aligned_cols=282 Identities=15% Similarity=0.160 Sum_probs=204.0
Q ss_pred ccceeeccccccchhhhhhhHHHHHHHHHHHhHHhhHhcccccCCchHHHHHHHHHHHHHHHHHHhhh------------
Q 041759 100 ALTIISEWGLECSSAFIKGLPAASHFTGCLLGIVFLATLADSSLGRKNLLFLSCLTMSVATSLTIFSN------------ 167 (525)
Q Consensus 100 ~~~i~~~~~~~~~s~~~~g~~~s~~~lg~~~~~~~~G~l~dr~~Grk~~~~~~~~~~~i~~~~~~~~~------------ 167 (525)
+++++++|++ +..+.|++.+.+.++++++.++.|+++|| +|||+++.++.+++++++++.++.+
T Consensus 56 l~~iek~F~l---ss~~~G~i~s~~~i~~~~~~i~v~~~~~r-~~r~~~i~~g~ll~~lg~ll~alphf~~~~y~~~~~~ 131 (633)
T TIGR00805 56 LTTIERRFKL---STSSSGLINGSYEIGNLLLIIFVSYFGTK-LHRPIVIGIGCAIMGLGSFLLSLPHFLSGRYSYSTTV 131 (633)
T ss_pred chhhhhhhCC---CCCcceeeeehhhHHHHHHHHHHHHhhcc-cCcceEEEecHHHHHHHHHHHhChHHhcCCccccccc
Confidence 9999999999 99999999999999999999999999999 9999999999999999999998764
Q ss_pred ---------------------------------------hHHHHHHHHHHHhhcccchhhhhheeeEeeecCcchhhHHh
Q 041759 168 ---------------------------------------NLWIYSLLRFFSGISRATIGTCTIVLLTEKVGTEWRGLVGI 208 (525)
Q Consensus 168 ---------------------------------------~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~ 208 (525)
.+..++++|+++|+|.+...+...+++.|++|+++|+++++
T Consensus 132 ~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~l~GiG~~~~~~~~~~~i~d~~~~~~~~~~~~ 211 (633)
T TIGR00805 132 SSTGNLSSANSFLCMENLTQALRPTQCPSECQKQHKESLMWLLFLVSQLLRGIGATPIFPLGISYIDDFAKSKNSPLYIG 211 (633)
T ss_pred cccccccccccccccCCCCCCccccccccccccccCCCceehhhHHHHHHHhccCCcchhcCchhhhccCCccccHHHHH
Confidence 25678899999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHhcc-CC----------------------chHHHHHHHHHHHHHHHhHhheeecCC-chHhhh
Q 041759 209 LDSFFFTIGTLTLPAIAYTNR-SS----------------------SWTIIYLWTSIPTLVYSGLLYIFVSES-PRWLFM 264 (525)
Q Consensus 209 ~~~~~~~~G~~l~~~l~~~~~-~~----------------------~wr~~f~~~~~~~~~~~~~~~~~lpes-p~~~~~ 264 (525)
++..+..+|.++|++++..+. .+ .||..|++.+++.++.. +.++++|+. |+.. .
T Consensus 212 i~~~~~~iG~~lG~llgg~l~~~~~d~~~~~~~~~~l~~~dprWiGaWwl~Fli~g~l~~l~~-v~l~~~p~~lp~~~-~ 289 (633)
T TIGR00805 212 ILESIAVFGPAFGYLLGSFCLQIYVDTGSVNTEDVILTPTDPRWIGAWWIGFLICGGVALLTS-IPFFFFPKALPKEG-K 289 (633)
T ss_pred HHHHHHHhhhHHHHHHHHHHHhcccccccCCCCCCCCCCCCccHHHHHHHHHHHHHHHHHHHH-HHHHhCccccCCcc-c
Confidence 999999999999999854332 11 27788999888888877 444556653 2100 0
Q ss_pred cCCHHHHHHHHHhhCCCcCCccchhhhhhhccCCCCcccccccccchhhhhhhhcchhHHHHHHHHHHHHHHHHHHHhhh
Q 041759 265 QGRQEEAVEVIKSLSPIKDSNQLSLSLVSAVSFGHEPAASSKESSFLSSIRELFVRRWALERTLALMVPGFGIGVVYYGM 344 (525)
Q Consensus 265 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~ 344 (525)
+.+.+..++ . . .+..+ .+ ...+...+.++....+++++++|.++...+..++...........+
T Consensus 290 ~~~~~~~~~----~-~-~~~~~---------~~-~~~~~~~~~~~~~~~~~~Ll~n~~f~~~~l~~~~~~~~~~~~~~~l 353 (633)
T TIGR00805 290 RVNVDVHET----E-K-LEKSE---------DK-SRKKNSDITKDFPKIIKRLLCNPIYMLVILAQVIDSLAFNGYITFL 353 (633)
T ss_pred ccchhhhhh----h-c-ccccc---------cc-cchhhhhhHHHHHHHHHHHHcCcHHHHHHHHHHHHHHHHHHHHHHH
Confidence 000000000 0 0 00000 00 0000000001112357789999998877777777666665555556
Q ss_pred hhccc-ccCChhHHHHHHHHHhcccccccCchhHHHHHHHHHhhc--ChhHHHHHHHHHHHHHHH
Q 041759 345 TLGIE-NLGFDIYLGVVFNALLEIPNLASTIPSFFLTFFLIQKWN--RKSSLLVLFIISGICSIM 406 (525)
Q Consensus 345 ~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~d~~g--~~~~~~~~~~~~~~~~~~ 406 (525)
|.+++ ++|.+...++.+.+...+ .+.++|.+++|+++||++ .|+.+.++.++..++.++
T Consensus 354 P~yl~~~~g~s~~~ag~l~~~~~i---~~~~vG~~l~G~l~~r~~~~~~~~~~~~~~~~~~~~~~ 415 (633)
T TIGR00805 354 PKYLENQYGISSAEANFLIGVVNL---PAAGLGYLIGGFIMKKFKLNVKKAAYFAICLSTLSYLL 415 (633)
T ss_pred HHHHHHHcCCcHHHHHHHhhhhhh---hHHHHHHhhhhheeeeecccHHHHHHHHHHHHHHHHHH
Confidence 66655 589998888887766543 133578899999999987 456666666666666444
No 96
>COG2807 CynX Cyanate permease [Inorganic ion transport and metabolism]
Probab=99.90 E-value=1.5e-21 Score=177.00 Aligned_cols=340 Identities=16% Similarity=0.147 Sum_probs=264.9
Q ss_pred ccceeeccccccchhhhhhhHHHHHHHHHHHhHHhhHhcccccCCchHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHH
Q 041759 100 ALTIISEWGLECSSAFIKGLPAASHFTGCLLGIVFLATLADSSLGRKNLLFLSCLTMSVATSLTIFSNNLWIYSLLRFFS 179 (525)
Q Consensus 100 ~~~i~~~~~~~~~s~~~~g~~~s~~~lg~~~~~~~~G~l~dr~~Grk~~~~~~~~~~~i~~~~~~~~~~~~~l~~~r~l~ 179 (525)
++++++|+|+ |.+..|++.++..+...+.+++..+++.| +|.++.+..++++..+|.++-... +.+.++.+-.+.
T Consensus 35 L~~Ir~~~gl---s~s~aGlLTtLPll~fg~~ap~a~~Lar~-~g~er~l~~~Llli~~G~~iR~~~-~~~~L~~gt~l~ 109 (395)
T COG2807 35 LDEIRQDLGL---SFSVAGLLTTLPLLAFGLFAPAAPRLARR-FGEERSLFLALLLIAAGILIRSLG-GLPLLFLGTLLA 109 (395)
T ss_pred HHHHHHHhcc---cHHHHHHHHHHHHHHHHHHHhhhHHHHHH-HhhHHHHHHHHHHHHHHHHHHhcc-cHHHHHHHHHHH
Confidence 9999999999 99999999999999999999999999999 999999999999999999998887 888899999999
Q ss_pred hhcccchhhhhheeeEeeecCcchhhHHhHHHHHHHHHHHHHHHHHHhc-cC-CchHHHHHHHHHHHHHHHhHhheeecC
Q 041759 180 GISRATIGTCTIVLLTEKVGTEWRGLVGILDSFFFTIGTLTLPAIAYTN-RS-SSWTIIYLWTSIPTLVYSGLLYIFVSE 257 (525)
Q Consensus 180 G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~l~~~l~~~~-~~-~~wr~~f~~~~~~~~~~~~~~~~~lpe 257 (525)
|.|.+......++.+.+.+|++ -+..++++.+..++|..+++.++.-+ .+ .+||....+-+.++++.+ +.|+ |.
T Consensus 110 G~gIav~nVLLPslIK~~Fpk~-~~~mtglYs~sl~~~aaLaa~lavpla~~~~gW~~aL~~WAl~allAl-~~Wl--Pq 185 (395)
T COG2807 110 GAGIAVINVLLPSLIKRDFPKR-VGLMTGLYSTSLGAGAALAAALAVPLAQHSGGWRGALGFWALLALLAL-LIWL--PQ 185 (395)
T ss_pred HhhHHHHHHhhhHHHHhhcccc-hhhHHhHHHHHHHHHHHHHhhhhhHHHHhhccHHHHHHHHHHHHHHHH-HHHh--hh
Confidence 9999999999999999999754 69999999999999999988775433 22 379999999999999887 5543 32
Q ss_pred CchHhhhcCCHHHHHHHHHhhCCCcCCccchhhhhhhccCCCCcccccccccchhhhhhhhcchhHHHHHHHHHHHHHHH
Q 041759 258 SPRWLFMQGRQEEAVEVIKSLSPIKDSNQLSLSLVSAVSFGHEPAASSKESSFLSSIRELFVRRWALERTLALMVPGFGI 337 (525)
Q Consensus 258 sp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~ 337 (525)
.. |++.. + ... + ..+-..++|+|.-|...+..-+..+..
T Consensus 186 ~~-------r~~~~--------~-~~~--------------------~-----~~~~~~vw~~~~aW~vtLfmGlqS~~~ 224 (395)
T COG2807 186 AL-------REQAA--------S-IAT--------------------K-----LVSVRKVWRSPLAWQVTLFMGLQSLLY 224 (395)
T ss_pred cc-------ccccc--------c-ccc--------------------c-----cccccccccCchhHHHHHHHHhhHHHH
Confidence 11 11000 0 000 0 013345889998787777766666666
Q ss_pred HHHHhhhhhcccccCChhHHHHHHHHHhcccccccCchhHHHHHHHHHhh-cChhHHHHHHHHHHHHHHHHHHhcccccc
Q 041759 338 GVVYYGMTLGIENLGFDIYLGVVFNALLEIPNLASTIPSFFLTFFLIQKW-NRKSSLLVLFIISGICSIMAVVANDISNA 416 (525)
Q Consensus 338 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~d~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 416 (525)
....-.+|.++.+.|.+..+++.+.++..+ .+++..+....+.+|. ++|+..+....++.++.+.+.+.+..
T Consensus 225 Y~~~~WLP~ili~~G~sa~~aG~llsl~~l----~~~~~~ll~P~la~R~~n~r~~~~~~~~~~l~G~~G~~~~P~~--- 297 (395)
T COG2807 225 YIVIGWLPAILIDRGLSAAEAGSLLSLMQL----AQLPTALLIPLLARRSKNQRPLVVLALLLMLVGLVGLLLAPGQ--- 297 (395)
T ss_pred HHHHHHHHHHHHHcCCCHHHhhhHHHHHHH----HHHHHHHHHHHHHHHhcccchHHHHHHHHHHHHHHHHHHhhhh---
Confidence 666666688888999999999999999998 8889999999999975 56777777777778888877776665
Q ss_pred chhHHHHHHHHHHHHHHHHHHHHHhhhccccC-cchhhhhhHHHHHHHHHHHHHHHHHHhhc---cCchhHHHHHHHHHH
Q 041759 417 GKRMRIGLELASLFSAYIAYTVIFIYAIELFP-TCVRNSATSIMRLAIIFAAIFSSVLVAAG---SNNEFVSYGVFGLVI 492 (525)
Q Consensus 417 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p-~~~r~~~~~~~~~~~~~g~~~~p~i~~~~---~~~~~~~~~~~~~~~ 492 (525)
++ +...++.|++.+..++.....+....+ ++..+.-.|+.+.++++-+.++|++.|.. ..++...+..++.+.
T Consensus 298 ~~---~lw~~llG~G~G~~F~laL~li~~rs~~a~~Aa~LSgmaQg~GYllAa~GP~l~G~lhDa~gsw~~~~~~l~~~~ 374 (395)
T COG2807 298 LP---ILWALLLGLGQGGAFPLALTLILLRSSDAAIAAALSGMAQGVGYLLAAFGPWLFGFLHDATGSWSAPLVLLALAT 374 (395)
T ss_pred HH---HHHHHHHhCccchHHHHHHHHHHhhcCChHHHHHHHHHhhhhhHHHHhhhhhhHhHHHHhcCChHHHHHHHHHHH
Confidence 12 222578888989999988777776553 45556777888888899999999999952 234445555555544
Q ss_pred HHHHHHH
Q 041759 493 ICCGFFV 499 (525)
Q Consensus 493 ~~~~~~~ 499 (525)
++..+.-
T Consensus 375 i~m~i~G 381 (395)
T COG2807 375 LLMLIFG 381 (395)
T ss_pred HHHHHHH
Confidence 4444433
No 97
>PF06609 TRI12: Fungal trichothecene efflux pump (TRI12); InterPro: IPR010573 This family consists of several fungal specific trichothecene efflux pump proteins. Many of the genes involved in trichothecene toxin biosynthesis in Fusarium sporotrichioides are present within a gene cluster. It has been suggested that TRI12 may play a role in F. sporotrichioides self-protection against trichothecenes [].
Probab=99.90 E-value=2e-21 Score=193.31 Aligned_cols=358 Identities=15% Similarity=0.105 Sum_probs=218.7
Q ss_pred ccceeeccccccchhhhhhhHHHHHHHHHHHhHHhhHhcccccCCchHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHH
Q 041759 100 ALTIISEWGLECSSAFIKGLPAASHFTGCLLGIVFLATLADSSLGRKNLLFLSCLTMSVATSLTIFSNNLWIYSLLRFFS 179 (525)
Q Consensus 100 ~~~i~~~~~~~~~s~~~~g~~~s~~~lg~~~~~~~~G~l~dr~~Grk~~~~~~~~~~~i~~~~~~~~~~~~~l~~~r~l~ 179 (525)
++.+.+|+| +.....|+.+.+.++.+++.++.|+++|. ||||.+++.+.++..+|++.++.++|...++++..+.
T Consensus 67 l~~I~~diG----~~~~~~w~~~~~~l~~av~~~~~G~LSDl-fGRr~~~i~g~~l~vvG~Iv~atA~~~~~~iag~~l~ 141 (599)
T PF06609_consen 67 LPYINADIG----GSDNWSWFSTAWTLASAVSFPFVGRLSDL-FGRRYFFIIGSLLGVVGSIVCATAQNMNTFIAGMVLY 141 (599)
T ss_pred HHHHHHhcC----CCccchHHHHHHHHHHHHHHHhhHHHHHH-hcchHHHHHHHHHHHhHHHHhhcCCcHHHHHHHHHHH
Confidence 778888888 45778899999999999999999999999 9999999999999999999999999999999999999
Q ss_pred hhcccchhhhhheeeEeeecCcchhhHHhHHHHHHHHHHHHHHHHHH-hccCCchHHHHHHHHHHHHHHHhHhheeecCC
Q 041759 180 GISRATIGTCTIVLLTEKVGTEWRGLVGILDSFFFTIGTLTLPAIAY-TNRSSSWTIIYLWTSIPTLVYSGLLYIFVSES 258 (525)
Q Consensus 180 G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~l~~~l~~-~~~~~~wr~~f~~~~~~~~~~~~~~~~~lpes 258 (525)
|+|.|.... ....++|..|.|+|....++......+....++.++. +..+.+|||.|++.++...+.+++..++.. +
T Consensus 142 GvgaG~~~~-~~~~isEl~p~k~R~~~~~~~~~~~i~~~~~~~~ia~~~~~~~~WRw~~~~~~i~~~i~~vl~~~fY~-P 219 (599)
T PF06609_consen 142 GVGAGVQEL-AALAISELVPNKWRGLGLAIASIPFIITTWISPLIAQLFAAHSGWRWIFYIFIIWSGIALVLIFFFYF-P 219 (599)
T ss_pred HHhhHHHHH-HHHHHHHhcccchhhhHhHHHHHHHHhhhcccHHHHHHhccCCCcchHHHHHHHHHHHHHHHHHHHhC-C
Confidence 999886654 4555899999999988887777666566666777754 344669999999998887776644333332 2
Q ss_pred chHhhhcCCHHHHHHHHHhhC-------------------CCcCC-ccchhh-hhh-h--------ccCCCCcccccccc
Q 041759 259 PRWLFMQGRQEEAVEVIKSLS-------------------PIKDS-NQLSLS-LVS-A--------VSFGHEPAASSKES 308 (525)
Q Consensus 259 p~~~~~~~~~~~~~~~~~~~~-------------------~~~~~-~~~~~~-~~~-~--------~~~~~~~~~~~~~~ 308 (525)
|++...+++....++.++++. -+.+. .+.... ..- . ..---|.. .+.+
T Consensus 220 P~~~~~~~~~~s~~~~l~~lD~IG~~L~~~Gl~LfLlgl~wgG~~~~~W~Sa~VIa~lviG~~~Lv~F~~wE~~--~~~~ 297 (599)
T PF06609_consen 220 PPRAQLHGRKLSKREQLKELDWIGIFLFIAGLALFLLGLSWGGYPYYPWKSAHVIAPLVIGFVLLVAFVVWEWF--GAPK 297 (599)
T ss_pred CchhhhccccCcHHHHHHHhhHHHHHHHHHHHHHHHHHHhccCCCCCCCCCccchhhHHHHHHHHHHHHHhhhh--ccCC
Confidence 222111111111111111110 00000 000000 000 0 00000000 0000
Q ss_pred cchhhhhhhhcchhHHHH-HHHHHHHHHHH-HHHHhhhhhcccccCChh---HHHHHHHHHhcccccccCchhHHHHHHH
Q 041759 309 SFLSSIRELFVRRWALER-TLALMVPGFGI-GVVYYGMTLGIENLGFDI---YLGVVFNALLEIPNLASTIPSFFLTFFL 383 (525)
Q Consensus 309 ~~~~~~~~l~~~~~~~~~-~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~l 383 (525)
+ ..-..+++|+++.... +++.++..... ....++......-++-+. ...+.......+ +...|.++.+.+
T Consensus 298 ~-Pl~P~~Lf~~~r~~~~~lvi~fi~G~~~~s~~~l~p~~~~~vf~~d~~~~~~~~~~s~~~~f----g~~~g~~i~g~l 372 (599)
T PF06609_consen 298 D-PLFPHRLFKDRRGFAALLVISFISGMNFFSVNILWPQQVVNVFGSDPISITEIGWISSPVGF----GSCAGAVILGLL 372 (599)
T ss_pred C-CcCCHHHhccchHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCcccceeehhhhhHHH----HHHHHHHHHHHH
Confidence 0 0233467777542222 22222222111 111122121111222222 122222222333 555788888889
Q ss_pred HHhhcChhHH-HHHHHHHHHHHHHHHHhccccccchhHHHHHHHHHHHHHHHHHHHHHhhhccccCcchhhhhhHHHHHH
Q 041759 384 IQKWNRKSSL-LVLFIISGICSIMAVVANDISNAGKRMRIGLELASLFSAYIAYTVIFIYAIELFPTCVRNSATSIMRLA 462 (525)
Q Consensus 384 ~d~~g~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~r~~~~~~~~~~ 462 (525)
..+++|-|.. +++..++.+++.++...... +....+...++.+++.+.........+.-..|++.-+++.|+...+
T Consensus 373 ~~~ir~~Kw~li~~~~~~ta~~Gama~~~~~---n~~~~i~~~~l~g~giG~~~~~~~~~~ql~~p~~~ig~a~gL~~s~ 449 (599)
T PF06609_consen 373 FSKIRHIKWQLIFGSVLMTAFCGAMAAVRPD---NKNAAIAFLVLAGFGIGGILVPAIVIAQLIVPDEDIGTATGLTGSI 449 (599)
T ss_pred HHHccchhHHHHHHHHHHHHHHHHHHHccCC---CcchHHHHHHHHHHhHHHHHHHHHHeeEeeeCchHHHHHHHHHHHH
Confidence 9888765544 56665555554444443332 1223456677788888887777777788888999999999999999
Q ss_pred HHHHHHHHHHHH
Q 041759 463 IIFAAIFSSVLV 474 (525)
Q Consensus 463 ~~~g~~~~p~i~ 474 (525)
..+|+.++..+.
T Consensus 450 R~~GGsIg~aIy 461 (599)
T PF06609_consen 450 RSIGGSIGYAIY 461 (599)
T ss_pred HHHhhHHHHHHH
Confidence 988877765554
No 98
>PF11700 ATG22: Vacuole effluxer Atg22 like; InterPro: IPR024671 Autophagy is a major survival mechanism in which eukaryotes recycle cellular nutrients during stress conditions. Atg22, Avt3 and Avt4 are partially redundant vacuolar effluxers, which mediate the efflux of leucine and other amino acids resulting from autophagy []. This family also includes other transporter proteins.
Probab=99.89 E-value=3.6e-20 Score=183.46 Aligned_cols=359 Identities=15% Similarity=0.113 Sum_probs=256.7
Q ss_pred hhhhhhhHHHHHHHHHHHhHHhhHhcccccCCchHHH-HHHHHHHHHHHHHHHhh--hhHHHHHHHHHHHhhcccchhhh
Q 041759 113 SAFIKGLPAASHFTGCLLGIVFLATLADSSLGRKNLL-FLSCLTMSVATSLTIFS--NNLWIYSLLRFFSGISRATIGTC 189 (525)
Q Consensus 113 s~~~~g~~~s~~~lg~~~~~~~~G~l~dr~~Grk~~~-~~~~~~~~i~~~~~~~~--~~~~~l~~~r~l~G~~~~~~~~~ 189 (525)
..+..++..++..+..++..|+.|.++|+ -|+||.+ .+..++..+++.+..+. ++++...+.-++.-++.+.....
T Consensus 68 ~~s~~~~~~sis~l~~all~P~lGa~aD~-~~~Rk~~l~~~~~~~~~~~~~l~~v~~~~~~~~~~l~iia~v~~~~~~vf 146 (477)
T PF11700_consen 68 TSSLWLYANSISGLLQALLAPFLGAIADY-GGRRKRFLLIFTLLGVLATALLWFVSPGQWWLALVLFIIANVGYEASNVF 146 (477)
T ss_pred HhHHHHHHHHHHHHHHHHHHHHHHHHHcc-cccchHHHHHHHHHHHHHHHHHHHhCcchHHHHHHHHHHHHHHHHHHHHH
Confidence 56677889999999999999999999999 8876654 45556666677776664 34555566667777788888888
Q ss_pred hheeeEeeecCcch--------------------------hhHHhHHHHHHHHHHHHHHHHHHhc--c-------CCchH
Q 041759 190 TIVLLTEKVGTEWR--------------------------GLVGILDSFFFTIGTLTLPAIAYTN--R-------SSSWT 234 (525)
Q Consensus 190 ~~~~i~~~~~~~~r--------------------------~~~~~~~~~~~~~G~~l~~~l~~~~--~-------~~~wr 234 (525)
..+++.|..+++++ ++..+.-.....+|.++..++...+ . ..+-|
T Consensus 147 yna~LP~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vS~~G~a~Gy~G~~v~l~i~l~~~~~~~~~~~~~~~~r 226 (477)
T PF11700_consen 147 YNAYLPDLARPEPRVRAAREPSANGNISDSEYEAVDSLTRGRVSGLGWALGYIGGLVALLISLLLVISPGSTASNTWAIR 226 (477)
T ss_pred HHHHhHhhcCCChhhhhhhhhhccCCCChhhhhhHHHhhhchhHHHHHHHHHHHHHHHHHHHHHHHHcCCCccccchhhh
Confidence 89999999998888 8999888888888888877664332 1 23468
Q ss_pred HHHHHHHHHHHHHHhHhheeecCCchHhhhcCCHHHHHHHHHhhCCCcCCccchhhhhhhccCCCCcccccccccchhhh
Q 041759 235 IIYLWTSIPTLVYSGLLYIFVSESPRWLFMQGRQEEAVEVIKSLSPIKDSNQLSLSLVSAVSFGHEPAASSKESSFLSSI 314 (525)
Q Consensus 235 ~~f~~~~~~~~~~~~~~~~~lpesp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 314 (525)
..+.+.++..++..+...+++||.|+....++.........+++ ...+
T Consensus 227 ~~~~~~a~ww~vfsiP~~~~~~~~~~~~~~~~~~~~~~~g~~~l--------------------------------~~t~ 274 (477)
T PF11700_consen 227 VAFLIVALWWLVFSIPLFLWLPDRPGPRPLPSGSSYLRFGFKRL--------------------------------WRTF 274 (477)
T ss_pred HHHHHHHHHHHHHHHHHHHhCCCCCCCCCCCcchhHHHHHHHHH--------------------------------HHHH
Confidence 99999999988888788889998764111111111122222332 1356
Q ss_pred hhhhcchhHHHHHHHHHHHHHHHHHHHhhh-hhcccccCChhHHHHHHHHHhcccccccCchhHHHHHHHHHhhcCh--h
Q 041759 315 RELFVRRWALERTLALMVPGFGIGVVYYGM-TLGIENLGFDIYLGVVFNALLEIPNLASTIPSFFLTFFLIQKWNRK--S 391 (525)
Q Consensus 315 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~d~~g~~--~ 391 (525)
+++.+.|...+.++..++..-+.+...... .+..+++|++..+...+..+..+ .+++|.++.+++.||+|.| +
T Consensus 275 k~~~~~~~~~~fLia~~l~~dg~~ti~~~~~i~a~~~lg~s~~~l~~~~l~~~i----~a~~Ga~~~g~l~~r~g~k~~~ 350 (477)
T PF11700_consen 275 KEIRKLRQLFLFLIAYFLYSDGVNTIISFAGIYATEVLGMSTTQLIVFGLVVQI----VAIIGALLFGWLQDRFGPKTKR 350 (477)
T ss_pred HHHHhChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCcCHHHHHHHHHHHHH----HHHHHHHHHHHHHHHhCCchhH
Confidence 677777776666666555555554444333 34444789988877766666666 7779999999999999988 7
Q ss_pred HHHHHHHHHHHHHHHHHH--hccc-cccchhHHHHHHHHHHHHHHHHHHHHHhhhccccCcchhhhhhHHHHHHHHHHHH
Q 041759 392 SLLVLFIISGICSIMAVV--ANDI-SNAGKRMRIGLELASLFSAYIAYTVIFIYAIELFPTCVRNSATSIMRLAIIFAAI 468 (525)
Q Consensus 392 ~~~~~~~~~~~~~~~~~~--~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~r~~~~~~~~~~~~~g~~ 468 (525)
.+.++.....+..+.-.+ .+.. ...+.+..+++.++.|++.+..++..-++.+|+.|+++.+..+|+........++
T Consensus 351 ~l~~~l~~~~~i~~~g~~G~~~~~~g~~~~~~f~~~a~~~G~~~G~~qs~sRs~~~~LiP~g~e~efFgly~i~gk~ss~ 430 (477)
T PF11700_consen 351 TLLISLILWIIIPLYGLFGFWPSFFGLKSPWEFWVLAVLIGLFMGGIQSASRSLFSRLIPPGREAEFFGLYAITGKASSW 430 (477)
T ss_pred HHHHHHHHHHHHHHHHHHHhhhcccCcccHHHHHHHHHHHHHHhhhHHHHHHHHHHHhCCCchhhHHHHHHHHHHHHHHH
Confidence 777666665333332222 1111 0012346777888999999999999999999999999999999999999999999
Q ss_pred HHHHHHhh---ccCchhHHHHHHHHHHHHHHHHHHhccCCCCC
Q 041759 469 FSSVLVAA---GSNNEFVSYGVFGLVIICCGFFVICLPETRGS 508 (525)
Q Consensus 469 ~~p~i~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 508 (525)
++|++.|. ...+....+....++.+++.++.+.++..|.+
T Consensus 431 lGPll~g~i~~~tg~~r~g~~~l~~lf~~gl~ll~~v~~~~g~ 473 (477)
T PF11700_consen 431 LGPLLFGLITDATGSQRYGFLFLLVLFLIGLILLFFVDVEKGR 473 (477)
T ss_pred HHHHHHHHHHHHhCCchhHHHHHHHHHHHHHHHHhhccchhhh
Confidence 99999995 22345667777777777777777777654443
No 99
>PRK09669 putative symporter YagG; Provisional
Probab=99.89 E-value=7.1e-21 Score=190.84 Aligned_cols=325 Identities=13% Similarity=0.050 Sum_probs=219.2
Q ss_pred ccceeeccccccchhhhhhhHHHHHHHHHHHhHHhhHhcccc---cCCc-hHHHHHHHHHHHHHHHHHHhhhh------H
Q 041759 100 ALTIISEWGLECSSAFIKGLPAASHFTGCLLGIVFLATLADS---SLGR-KNLLFLSCLTMSVATSLTIFSNN------L 169 (525)
Q Consensus 100 ~~~i~~~~~~~~~s~~~~g~~~s~~~lg~~~~~~~~G~l~dr---~~Gr-k~~~~~~~~~~~i~~~~~~~~~~------~ 169 (525)
...+.+++|+ +..++|++.++..+..++..|+.|+++|| |+|| |+.++.+.+..+++.++....++ +
T Consensus 33 ~~~~t~~~gl---s~~~~g~i~~i~~i~dai~dp~~G~lsD~~~~r~Grrrp~il~~~~~~~i~~~l~f~~p~~~~~~~~ 109 (444)
T PRK09669 33 AYFYTDVFGL---SAAIMGTMFLVVRVLDAVTDPLMGALVDRTRTRHGQFRPYLLWFAIPFGVVCLLTFYTPDFGATGKI 109 (444)
T ss_pred HHHHHHhcCC---CHHHHHHHHHHHHHHHHcccceeeEeeecCCCCCCCcchhHHHHHHHHHHHHHHHHhCCCCCcchHH
Confidence 5566778999 99999999999999999999999999998 5787 45666787888777766555442 5
Q ss_pred HHHHHHHHHHhhcccchhhhhheeeEeeec-CcchhhHHhHHHHHHHHHHHHHHHH-----HHhc---cCCchHHHHHHH
Q 041759 170 WIYSLLRFFSGISRATIGTCTIVLLTEKVG-TEWRGLVGILDSFFFTIGTLTLPAI-----AYTN---RSSSWTIIYLWT 240 (525)
Q Consensus 170 ~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~-~~~r~~~~~~~~~~~~~G~~l~~~l-----~~~~---~~~~wr~~f~~~ 240 (525)
+++++..++.+.+.........++.+|+.+ +++|++..++...+..+|..+++.+ ..+- ...+|+..+.+.
T Consensus 110 ~~~~~~~~l~~~~~t~~~ip~~al~~~~t~~~~eR~~l~~~r~~~~~~G~~i~~~~~~pl~~~~~~~~~~~g~~~~~~i~ 189 (444)
T PRK09669 110 IYACVTYILLSLVYTAINVPYCAMPGAITNDPRERHSLQSWRFALSFIGGLIVSVIALPLVDILGKGDEQKGYFYAMMVM 189 (444)
T ss_pred HHHHHHHHHHHHHHHhhcchHHHhHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCchhhhHHHHHHHH
Confidence 667777777777777777777788999884 5889988888888888877776543 2221 135799988888
Q ss_pred HHHHHHHHhHhheeecCCchHhhhcCCHHHHHHHHHhhCCCcCCccchhhhhhhccCCCCcccccccccchhhhhhhhcc
Q 041759 241 SIPTLVYSGLLYIFVSESPRWLFMQGRQEEAVEVIKSLSPIKDSNQLSLSLVSAVSFGHEPAASSKESSFLSSIRELFVR 320 (525)
Q Consensus 241 ~~~~~~~~~~~~~~lpesp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 320 (525)
+++.++..++.++..+|.++ + + ++ + +.+....++.+++|
T Consensus 190 ~ii~~v~~~~~~~~~~e~~~----~-~-~~---------~--------------------------~~~~~~~~~~~~~n 228 (444)
T PRK09669 190 GLLGVVLFFCCFFMTKERYT----P-E-VD---------N--------------------------SSSVWKDLKLLLGN 228 (444)
T ss_pred HHHHHHHHHHHhCCeEEecC----C-C-Cc---------C--------------------------CCCHHHHHHHHhCC
Confidence 88887776455555555321 0 0 00 0 00011467788899
Q ss_pred hhHHHHHHHHHHHHHHHHHHHhhhhhcccccCChhHHHHHHHHHhcccccccCchhHHHHHHHHHhhcChhHHHHHHHHH
Q 041759 321 RWALERTLALMVPGFGIGVVYYGMTLGIENLGFDIYLGVVFNALLEIPNLASTIPSFFLTFFLIQKWNRKSSLLVLFIIS 400 (525)
Q Consensus 321 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~d~~g~~~~~~~~~~~~ 400 (525)
|.++..++..++.............++.+..-.+............+ ..+++.++.+++.||+|+|+.+..+..+.
T Consensus 229 ~~~~~l~~~~~~~~~~~~~~~~~~~y~~~~~~~~~~~~~~~~~~~~i----~~ii~~~~~~~l~~r~gk~~~~~~~~~~~ 304 (444)
T PRK09669 229 SQWRIMFIFNVVLLTAVVTRGGATLYYVNYVLLRPDLATLFLVTGMI----AGLFGALLSERLLGKFDRVRAFKWTIVAF 304 (444)
T ss_pred chHHHHHHHHHHHHHHHHHHhhhhheeeeeecCCHHHHHHHHHHHHH----HHHHHHHHHHHHHHHhChHHHHHHHHHHH
Confidence 98766655554444443332223333333322222222223332233 55578889999999999999998887666
Q ss_pred HHHHHHHHHhccccccchhHHHHHHHHHHHHHHHHHHHHHhhhccccC-------cchhhhhhHHHHHHHHHHHHHHHHH
Q 041759 401 GICSIMAVVANDISNAGKRMRIGLELASLFSAYIAYTVIFIYAIELFP-------TCVRNSATSIMRLAIIFAAIFSSVL 473 (525)
Q Consensus 401 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p-------~~~r~~~~~~~~~~~~~g~~~~p~i 473 (525)
.+..+.+...+.. +....++..++.+++.+...+..+++.+|..+ ++..|...+..+....+|..++|.+
T Consensus 305 ~~~~~~~~~~~~~---~~~~~~~~~~i~g~~~~~~~~~~~am~ad~~d~~e~~~G~r~~g~~~s~~~~~~klg~alg~~i 381 (444)
T PRK09669 305 VILSALIFFIPPS---NVWLIFALNILFNFIQNLTTPLQWSMFSDVVDYEEKRSGRRLDGLVFSTNLFAIKLGLAIGGAV 381 (444)
T ss_pred HHHHHHHHHhCcc---hHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhhhcCcCcchHHHHHHHHHHHHHHHHHHHH
Confidence 5544433333222 23355666778888888888999999998875 2334567788888888898888888
Q ss_pred Hh
Q 041759 474 VA 475 (525)
Q Consensus 474 ~~ 475 (525)
.|
T Consensus 382 ~g 383 (444)
T PRK09669 382 VG 383 (444)
T ss_pred HH
Confidence 76
No 100
>PRK09584 tppB putative tripeptide transporter permease; Reviewed
Probab=99.89 E-value=8.1e-21 Score=191.85 Aligned_cols=372 Identities=11% Similarity=0.061 Sum_probs=221.4
Q ss_pred ccceeeccccccchhhhhhhHHHHHHHHHHHhHHhhHhcccccC-CchHHHHHHHHHHHHHHHHHHhhh-hHHHHHHHHH
Q 041759 100 ALTIISEWGLECSSAFIKGLPAASHFTGCLLGIVFLATLADSSL-GRKNLLFLSCLTMSVATSLTIFSN-NLWIYSLLRF 177 (525)
Q Consensus 100 ~~~i~~~~~~~~~s~~~~g~~~s~~~lg~~~~~~~~G~l~dr~~-Grk~~~~~~~~~~~i~~~~~~~~~-~~~~l~~~r~ 177 (525)
...+++++|+ +..+.+++.+.+........+++|+++|| + |||++++++.++.+++.+++++++ +.+.+.++|+
T Consensus 45 ~~yl~~~lg~---s~~~a~~~~~~~~~~~~~~~~~~G~LaDr-~~G~r~~~~~g~~~~~ig~~l~~~~~~~~~~l~~~~~ 120 (500)
T PRK09584 45 AVYLVKQLGM---SEADSITLFSSFSALVYGLVAIGGWLGDK-VLGTKRVIMLGAIVLAIGYALVAWSGHDAGIVYMGMA 120 (500)
T ss_pred HHHHHHHcCC---CHHHHHHHHHHHHHHHHHHHHHHHHHHHh-ccchHHHHHHHHHHHHHHHHHHHHhcccHHHHHHHHH
Confidence 4456688999 88888988888877766677899999999 8 999999999999999999998874 5667788999
Q ss_pred HHhhcccchhhhhheeeEeeecCcc--hhhHHhHHHHHHHHHHHHHHHH-HHhccCCchHHHHHHHHHHHHHHH---hHh
Q 041759 178 FSGISRATIGTCTIVLLTEKVGTEW--RGLVGILDSFFFTIGTLTLPAI-AYTNRSSSWTIIYLWTSIPTLVYS---GLL 251 (525)
Q Consensus 178 l~G~~~~~~~~~~~~~i~~~~~~~~--r~~~~~~~~~~~~~G~~l~~~l-~~~~~~~~wr~~f~~~~~~~~~~~---~~~ 251 (525)
++|++.|...+...+++.|++|+++ |+.++++++.+.++|.++||.+ +++.+..|||+.|++.++..++.. +..
T Consensus 121 l~gig~g~~~~~~~~l~~~~f~~~~~~~~~~~~~~~~~~~iG~~~gp~i~g~l~~~~g~~~~F~i~~i~~~i~~i~~~~~ 200 (500)
T PRK09584 121 TIAVGNGLFKANPSSLLSTCYEKDDPRLDGAFTMYYMSINIGSFFSMLATPWLAAKYGWSVAFALSVVGMLITVVNFAFC 200 (500)
T ss_pred HHHHhhhcccCCHHHHHHHhcCCCchhhhhcchHHHHHHHHHHHHHHHHHHHHHHhhCHHHHHHHHHHHHHHHHHHHHHh
Confidence 9999999988988899999998643 4567888999999999999988 556677899999999876544433 122
Q ss_pred heeecCCchHhhhcCCHHHHHHHH-----------HhhCCCcCCccchhhhh------hhccCCCCcccccccccchhhh
Q 041759 252 YIFVSESPRWLFMQGRQEEAVEVI-----------KSLSPIKDSNQLSLSLV------SAVSFGHEPAASSKESSFLSSI 314 (525)
Q Consensus 252 ~~~lpesp~~~~~~~~~~~~~~~~-----------~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~ 314 (525)
...++|.++. ..+++.+...... ..... .+. +...... .......+ . ...
T Consensus 201 ~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~-~~~~~~~~~~~~~~~~~~~~~-~---------~~~ 267 (500)
T PRK09584 201 QRWVKQYGSK-PDFEPINYRKLLLTIVGVVALIAIATWLL-HNQ-EIARMALGVVALGIVVIFGKE-A---------FAM 267 (500)
T ss_pred HHHhccCCCC-CCccccchhhHHHHHHHHHHHHHHHHHHH-hcc-hHHHHHHHHHHHHHHHHHHHH-H---------hhc
Confidence 2233332100 0000001000000 00000 000 0000000 00000000 0 000
Q ss_pred hhhhcchhHHHHHHHHHHHHHHHHHHHhhhhhccc-----c-----cCC--hhHHHHHHHHHhcccccccCchhHHHH--
Q 041759 315 RELFVRRWALERTLALMVPGFGIGVVYYGMTLGIE-----N-----LGF--DIYLGVVFNALLEIPNLASTIPSFFLT-- 380 (525)
Q Consensus 315 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~-----~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~-- 380 (525)
.+.-+++. ... +..++........+...+..+. + .|. .......+.++..+ +..++.
T Consensus 268 ~~~~~~~~-~~~-~~~~~~~i~f~~~~~q~~~~l~~~~~~~~~~~~~g~~i~~~~~~s~n~i~ii-------l~~p~~~~ 338 (500)
T PRK09584 268 KGAARRKM-IVA-FILMLEAIIFFVLYSQMPTSLNFFAIRNVEHSILGIAVEPEQYQALNPFWIM-------IGSPILAA 338 (500)
T ss_pred CHHHHHHH-HHH-HHHHHHHHHHHHHHHHhccHHHHHHHHhccccccceEECHHHHHHHhHHHHH-------HHHHHHHH
Confidence 00111111 111 1111111111122222222211 1 121 12222233332222 444444
Q ss_pred --HHHHHhhcChhHHHHHHHHHHHHHHHHHHhcccc----ccchhHHHHHHHHHHHHHHHHHHHHHhhhccccCcchhhh
Q 041759 381 --FFLIQKWNRKSSLLVLFIISGICSIMAVVANDIS----NAGKRMRIGLELASLFSAYIAYTVIFIYAIELFPTCVRNS 454 (525)
Q Consensus 381 --~~l~d~~g~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~r~~ 454 (525)
+++.+|.+..+.+.+++++.+++++.+....... .-+.++.+...++.+++.....|...+++.+..|++.||+
T Consensus 339 ~~~~l~~r~~~~~~~~~G~~l~~l~f~~l~~~~~~~~~~~~vs~~~~~~~~~l~~~ge~~~~p~g~s~~~~~aP~~~rg~ 418 (500)
T PRK09584 339 IYNKMGDRLPMPHKFAIGMVLCSGAFLVLPLGAKFANDAGIVSVNWLIASYGLQSIGELMISGLGLAMVAQLVPQRLMGF 418 (500)
T ss_pred HHHHhCcCCCcHHHHHHHHHHHHHHHHHHHHHHHhcCCCCccCHHHHHHHHHHHHHHHHHHhHHHHHHHHHhCcHHHHHH
Confidence 4444444555778888999998888876653310 1123367778888899999999999999999999999999
Q ss_pred hhHHHHHHHHHHHHHHHHHHhhc------------cCchhHHHHHHHHHHHHHHH
Q 041759 455 ATSIMRLAIIFAAIFSSVLVAAG------------SNNEFVSYGVFGLVIICCGF 497 (525)
Q Consensus 455 ~~~~~~~~~~~g~~~~p~i~~~~------------~~~~~~~~~~~~~~~~~~~~ 497 (525)
.+|+......+|+.++..+.+.. ..+....|...++..++..+
T Consensus 419 ~~g~~~l~~a~g~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~a~ 473 (500)
T PRK09584 419 IMGSWFLTTAGAALIAGYVANLMAVPDNVTDPLMSLEVYGRVFLQIGIATAVIAV 473 (500)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhccccccccchhhhhhHHHHHHHHHHHHHHHHH
Confidence 99988877777777766665411 01245666666665554443
No 101
>TIGR01301 GPH_sucrose GPH family sucrose/H+ symporter. This model represents sucrose/proton symporters, found in plants, from the Glycoside-Pentoside-Hexuronide (GPH)/cation symporter family. These proteins are predicted to have 12 transmembrane domains. Members may export sucrose (e.g. SUT1, SUT4) from green parts to the phloem for long-distance transport or import sucrose (e.g SUT2) to sucrose sinks such as the tap root of the carrot.
Probab=99.89 E-value=4e-20 Score=181.77 Aligned_cols=377 Identities=15% Similarity=0.114 Sum_probs=243.3
Q ss_pred ccceeeccccccchhhhhhhHHHHHHHHHHHhHHhhHhcccc---cCCchHHHHHH-HHHHHHHHHHHHhhhhHH-----
Q 041759 100 ALTIISEWGLECSSAFIKGLPAASHFTGCLLGIVFLATLADS---SLGRKNLLFLS-CLTMSVATSLTIFSNNLW----- 170 (525)
Q Consensus 100 ~~~i~~~~~~~~~s~~~~g~~~s~~~lg~~~~~~~~G~l~dr---~~Grk~~~~~~-~~~~~i~~~~~~~~~~~~----- 170 (525)
.+.+.+++|+ +..+.+++..+..+..++.+++.|+++|| |+||||.++++ .+...++.++.+++++.+
T Consensus 27 l~~yl~~lg~---~~~~~~~i~~~~~l~~~i~~Pi~G~lSDr~~sr~GRRrp~il~g~~~~~~~l~ll~~~~~~~~~~~~ 103 (477)
T TIGR01301 27 LTPYVQELGI---PHAWASIIWLCGPLSGLLVQPLVGYLSDRCTSRFGRRRPFIAAGAALVAFAVILIGFAADIGHLFGD 103 (477)
T ss_pred HHHHHHHcCC---CHHHHHHHHHHHHHHHHHHHhHeeehhcCCCCCCCChHHHHHHHHHHHHHHHHHHHhCchhhhhccc
Confidence 4456788999 99999999999999999999999999993 39999988774 666667777777776643
Q ss_pred ------------HHHHHHHHHhhcccchhhhhheeeEeeecCcch--hhHHhHHHHHHHHHHHHHHHHHHhcc---C---
Q 041759 171 ------------IYSLLRFFSGISRATIGTCTIVLLTEKVGTEWR--GLVGILDSFFFTIGTLTLPAIAYTNR---S--- 230 (525)
Q Consensus 171 ------------~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r--~~~~~~~~~~~~~G~~l~~~l~~~~~---~--- 230 (525)
.++++-.+..++.....+...++++|.+|+++| +.+.++.+.+.++|.++|+.++.+.. .
T Consensus 104 ~~~~~~~~~~i~~~~i~~~lld~~~n~~~~p~rALiaDl~p~~~~~~~~a~~~~~~~~~lG~ilg~~~g~~~~~~~~~~~ 183 (477)
T TIGR01301 104 NLDKKTKPRAIIVFVVGFWILDVANNMLQGPCRAFLADLTGGDARRTRIANAYFSFFMAIGNVLGYAAGAYSGLYKIFPF 183 (477)
T ss_pred cccccchhHHHHHHHHHHHHHHHHHHHHHHHHHHhcccccCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHhccc
Confidence 333334455558888888899999999998765 57899999999999999999875431 0
Q ss_pred ----------CchHHHHHHHHHHHHHHHhHhheeecCCchHhhhcCCHHHHHHHHHhhCCCcCCccchhhhhhhccCCCC
Q 041759 231 ----------SSWTIIYLWTSIPTLVYSGLLYIFVSESPRWLFMQGRQEEAVEVIKSLSPIKDSNQLSLSLVSAVSFGHE 300 (525)
Q Consensus 231 ----------~~wr~~f~~~~~~~~~~~~~~~~~lpesp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 300 (525)
.+.|+.|++.++..++..++..+.++|.|.. .+++.++ + +..+ .++. +
T Consensus 184 ~~~~~~~~~~~~~~~~F~i~a~~l~i~~l~t~~~v~E~~~~--~~~~~~~--~---~~~~-~~~~--------------~ 241 (477)
T TIGR01301 184 TKTEACGVSCANLKSCFLIDIILLAILTYIALSAVKENPLI--GSDDFIN--S---EAAP-PSKH--------------G 241 (477)
T ss_pred ccccccccccchHHHHHHHHHHHHHHHHHHHeeeeeccCCC--ccccchh--h---hccc-cccc--------------c
Confidence 2678999999998888887888889996521 0000000 0 0000 0000 0
Q ss_pred cccccccccchhhhhhhhc-chhHHHHHHHHHHHHHHHHHHH-hhhhhcccc-cCCh-----hHHHHHH-HHHhcccccc
Q 041759 301 PAASSKESSFLSSIRELFV-RRWALERTLALMVPGFGIGVVY-YGMTLGIEN-LGFD-----IYLGVVF-NALLEIPNLA 371 (525)
Q Consensus 301 ~~~~~~~~~~~~~~~~l~~-~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~-~~~~-----~~~~~~~-~~~~~~~~~~ 371 (525)
. .+ ....-++.+.+ .+.+++..++.++.|++..... |..++.-++ ++.+ .++.+.- .....+.+.+
T Consensus 242 -~--~~--~~~~i~~~~~~mP~~m~~l~~vqffsW~a~f~~~~y~T~~vg~~v~~~~~~~~~~y~~gvr~G~~~l~~~s~ 316 (477)
T TIGR01301 242 -E--EA--FFGELFGAFKYLPRPVWILLLVTCLNWIAWFPFILFDTDWMGREVYGGSVNQGAKYDDGVRAGAFGLMLNSV 316 (477)
T ss_pred -h--hh--hHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHcCCCCcchhHHHHHHHHHHHHHHHHHH
Confidence 0 00 00011222222 2455667777777887654333 333332221 2211 1111100 0000011111
Q ss_pred cCchhHHHHHHHHHhhcC-hhHHHHHHHHHHHHHHHHHHhcccc----------------ccchhHHHHHHHHHHHHHHH
Q 041759 372 STIPSFFLTFFLIQKWNR-KSSLLVLFIISGICSIMAVVANDIS----------------NAGKRMRIGLELASLFSAYI 434 (525)
Q Consensus 372 ~~~~~~~~~~~l~d~~g~-~~~~~~~~~~~~~~~~~~~~~~~~~----------------~~~~~~~~~~~~~~~~~~~~ 434 (525)
...+.+++..++.+|+|+ |+...++.++.++++....+..... .......++...+.|+....
T Consensus 317 ~~~i~s~~l~~l~~~~g~~k~~~~~s~~~~~~~l~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~Gi~~A~ 396 (477)
T TIGR01301 317 VLGITSIGMEKLCRGWGAGKRLWGIVNIILAICLAATVLVTYVAKNSRYYDGDGESLPPPTGIKASALIVFAILGIPLAI 396 (477)
T ss_pred HHHHHHHHHHHHHHHhccchhHHHHHHHHHHHHHHHHHHHHhhhhccccccccccccCcchhhHHHHHHHHHHhhHHHHH
Confidence 222666778888999985 6777888888888877776544210 00024566777888888999
Q ss_pred HHHHHHhhhccccCc--chhhhhhHHHHHHHHHHHHHHHHHHhh----ccCchhHHHHHHHHHHHHHHHHH-HhccCCC
Q 041759 435 AYTVIFIYAIELFPT--CVRNSATSIMRLAIIFAAIFSSVLVAA----GSNNEFVSYGVFGLVIICCGFFV-ICLPETR 506 (525)
Q Consensus 435 ~~~~~~~~~~~~~p~--~~r~~~~~~~~~~~~~g~~~~p~i~~~----~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~ 506 (525)
.+.+.++++++..|+ +..|..+|+.|.+..+.+++..+..|. ...+....+.+.++..+++.++. +.+|+.+
T Consensus 397 ~~siPfal~s~~~~~~~~~~G~~mgilN~~I~lpQii~sl~~g~~~~~~g~~~~~~~~~~gv~~~~aa~~~~~~~~~~~ 475 (477)
T TIGR01301 397 TYSIPFALASIRSSNLGAGQGLSMGVLNLAIVIPQIIVSLGSGPWDQLFGGGNLPAFVVGAVAAFVSGLLALILLPRPR 475 (477)
T ss_pred HHHHhHHHHHHHccccCCCCcchhhHHHHHHHHHHHHHHHHHHHHHHHcCCCCeeHHHHHHHHHHHHHHHHHHhCCCCC
Confidence 999999999999995 455999999999998888877766553 22334556666666677766654 4456654
No 102
>PF03825 Nuc_H_symport: Nucleoside H+ symporter
Probab=99.88 E-value=3.3e-20 Score=180.37 Aligned_cols=324 Identities=17% Similarity=0.178 Sum_probs=236.5
Q ss_pred ccceeeccccccchhhhhhhHHHHHHHHHHHhHHhhHhcccccCC-chHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHH
Q 041759 100 ALTIISEWGLECSSAFIKGLPAASHFTGCLLGIVFLATLADSSLG-RKNLLFLSCLTMSVATSLTIFSNNLWIYSLLRFF 178 (525)
Q Consensus 100 ~~~i~~~~~~~~~s~~~~g~~~s~~~lg~~~~~~~~G~l~dr~~G-rk~~~~~~~~~~~i~~~~~~~~~~~~~l~~~r~l 178 (525)
++..-++.|+ |..|+|++.++..+...++++++|.++|| ++ +|+++.+..++.++..+.....++++.+++..++
T Consensus 25 ~~~~L~~~G~---s~~qIG~l~a~~~~~~i~~~~~~g~~aDr-~~~~~~~l~~~~l~~~~~~~~~~~~~~f~~~~~~~~l 100 (400)
T PF03825_consen 25 LPLYLESRGF---SGTQIGILLAVGPLARIVSPPFWGAIADR-FGSAKRILALLSLLSALALLLLAFSSSFWWLFVIMLL 100 (400)
T ss_pred HHHHHHhCCC---CHHHHHHHHHHHHHHHHHHHHHHHHHHhH-hhhHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHH
Confidence 6667788889 99999999999999999999999999999 76 5788888888888877777888899999988888
Q ss_pred HhhcccchhhhhheeeEeeecCcchhhHHhHHHHHHHHHHHHHHHH--HHhcc---CCchHHHHHHHHHHHHHHHhHhhe
Q 041759 179 SGISRATIGTCTIVLLTEKVGTEWRGLVGILDSFFFTIGTLTLPAI--AYTNR---SSSWTIIYLWTSIPTLVYSGLLYI 253 (525)
Q Consensus 179 ~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~l~~~l--~~~~~---~~~wr~~f~~~~~~~~~~~~~~~~ 253 (525)
..+......|...++..+... ++++-.+-.....++|.+++... ..... ..+..+.+++.+...++.. ...+
T Consensus 101 ~~~~~~p~~pl~dsi~~~~~~--~~~~~YG~iRlwGSiGf~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~ll~-~~~l 177 (400)
T PF03825_consen 101 FSFFFSPTMPLSDSIALSYLG--DRGKDYGRIRLWGSIGFIVAALAFGGLLGGYLGISGTSLIFYIAAILSLLLA-GFAL 177 (400)
T ss_pred HHHHHccHHHHHHHHHHHHcc--cccCCCCcchhhhhHHHHHHHHHHHHHHHhhhccccccHHHHHHHHHHHHHH-HHHH
Confidence 888888888888887776664 34445555666667777666432 11221 1233345666666555554 4455
Q ss_pred eecCCchHhhhcCCHHHHHHHHHhhCCCcCCccchhhhhhhccCCCCcccccccccchhhhhhhhcchhHHHHHHHHHHH
Q 041759 254 FVSESPRWLFMQGRQEEAVEVIKSLSPIKDSNQLSLSLVSAVSFGHEPAASSKESSFLSSIRELFVRRWALERTLALMVP 333 (525)
Q Consensus 254 ~lpesp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~ 333 (525)
.+|+.|. +++.++..+ +....+..+++|+|++...++..++.
T Consensus 178 ~lp~~~~----~~~~~~~~~----------------------------------~~~~~~~~~llk~~~~~~Fll~~~l~ 219 (400)
T PF03825_consen 178 FLPKTPP----KRSAKESVK----------------------------------KLLGLDALKLLKNPRFLVFLLAAFLI 219 (400)
T ss_pred hCCCCcc----ccccCCCcc----------------------------------cccchHHHHHhcCccHHHHHHHHHHH
Confidence 6777652 000000000 00002445789999988887877777
Q ss_pred HHHHHHHHhhhhhcccccC-ChhHHHHHHHHHhcccccccCchhHHHHHHHHHhhcChhHHHHHHHHHHHHHHHHHHhcc
Q 041759 334 GFGIGVVYYGMTLGIENLG-FDIYLGVVFNALLEIPNLASTIPSFFLTFFLIQKWNRKSSLLVLFIISGICSIMAVVAND 412 (525)
Q Consensus 334 ~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~d~~g~~~~~~~~~~~~~~~~~~~~~~~~ 412 (525)
.......+.+.+.++++.| .+....+...++..+ +-++..+..+++.+|+|.|+++.++.+..++=..++....+
T Consensus 220 ~~~~~~~~~f~~~yl~~~gg~~~~~~g~~~~l~~~----aEi~~f~~~~~~~~r~g~~~ll~~a~~~~~vR~~l~a~~~~ 295 (400)
T PF03825_consen 220 GISHAAYYTFFSIYLQELGGYSGSTIGILWALGVV----AEIPFFFFSGRFLKRFGIKWLLLLALVAYAVRWLLYAYFSD 295 (400)
T ss_pred HHHHHHHHHHHHHHHHHcccchhhHHHHHHHHHHH----HHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHhcC
Confidence 7777877777788888888 555555555554444 55588899999999999999999999999999988887743
Q ss_pred ccccchhHHHHH----HHHHHHHHHHHHHHHHhhhccccCcchhhhhhHHHHHHH-HHHHHHHHHHHhh
Q 041759 413 ISNAGKRMRIGL----ELASLFSAYIAYTVIFIYAIELFPTCVRNSATSIMRLAI-IFAAIFSSVLVAA 476 (525)
Q Consensus 413 ~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~p~~~r~~~~~~~~~~~-~~g~~~~p~i~~~ 476 (525)
+ ++..... ..+.+...+..+.....++.+..|++.|++++++.+... .+|..++.++.|.
T Consensus 296 ~----~~~~~~~~~l~q~lhG~tf~~~~~a~~~yi~~~~p~~~~at~Q~l~~~~~~Glg~~iG~~igG~ 360 (400)
T PF03825_consen 296 P----WPFIVALQLLGQLLHGLTFGLFHAASVRYIDRIAPPELRATAQGLYSALSFGLGGAIGSLIGGW 360 (400)
T ss_pred C----cHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHhCCccchHHHHHHHHHHHhhHHHHHHHHHHHH
Confidence 3 1222222 345788888888899999999999999999999988764 7888898888884
No 103
>TIGR00788 fbt folate/biopterin transporter. The only functionally characterized members of the family are from protozoa and include FT1, the major folate transporter in Leishmania, and BT1, the Leishmania biopterin/folate transporter. A related protein in Trypanosoma brucei, ESAGIO, shows weak folate/biopterin transport activity.
Probab=99.88 E-value=5.5e-21 Score=191.39 Aligned_cols=343 Identities=11% Similarity=0.022 Sum_probs=229.4
Q ss_pred ccceeeccccccchhhhhhhHHHHHHHHHHHhHHhhHhcccccCC-----chHHHHHHHHHHH-HHHHHHHhhhhHHHH-
Q 041759 100 ALTIISEWGLECSSAFIKGLPAASHFTGCLLGIVFLATLADSSLG-----RKNLLFLSCLTMS-VATSLTIFSNNLWIY- 172 (525)
Q Consensus 100 ~~~i~~~~~~~~~s~~~~g~~~s~~~lg~~~~~~~~G~l~dr~~G-----rk~~~~~~~~~~~-i~~~~~~~~~~~~~l- 172 (525)
.+.+++++|+ +..+++...+...+...+-.+ +|+++|| ++ ||+.++++.++.+ ++....+..++....
T Consensus 49 ~~~l~~~lg~---s~~~i~~~~sl~~lpw~~K~l-~g~l~D~-~~i~G~rRr~~l~~~~~l~~~~~~~~l~~~~~~~~~~ 123 (468)
T TIGR00788 49 SPMLTDDLGL---DGARYQRLVGLSSLGWALKPF-AGVMSDT-FPLFGYTKRWYLVLSGLLGSAILYGLLPGKVSSAKVA 123 (468)
T ss_pred hHHHHHhcCC---CHHHHHHHHHHHHHHHHHHHH-HHHHHHh-cCCCCccchHHHHHHHHHHHHHHHHhcccccchHHHH
Confidence 6777888999 999999999999999999776 9999999 97 7777888877763 443444444554444
Q ss_pred HHHHHHHhhcccchhhhhheeeEeeecCcchhhHHhHH---HHHHHHHHHHHHHH-HHhccCCchHHHHHHHHHHHHHHH
Q 041759 173 SLLRFFSGISRATIGTCTIVLLTEKVGTEWRGLVGILD---SFFFTIGTLTLPAI-AYTNRSSSWTIIYLWTSIPTLVYS 248 (525)
Q Consensus 173 ~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~---~~~~~~G~~l~~~l-~~~~~~~~wr~~f~~~~~~~~~~~ 248 (525)
.+.+++.+++.+...+...++..|..+ +++....+.. .....+|.++++.+ +.+.+..+||..|++.+.+.++..
T Consensus 124 ~~~~~l~~~~~a~~dv~~da~~~e~~~-~~~~~~~~~~s~~~~~~~~G~~vg~~l~G~l~~~~~~~~~f~~~a~l~ll~~ 202 (468)
T TIGR00788 124 AAFIFLAALAKALYDVLVDSLYSERIR-ESPSAGPSLVSWMWGASATGGLISSLLGGPLLDKTLTRILFLITAALLLLQL 202 (468)
T ss_pred HHHHHHHHHHHHHHHHhHHHHHhhhhh-cCCCcCCCeeeHHHHHHHHHHHHHHHHHHHHHHhcCcchHHHHHHHHHHHHH
Confidence 448899999999999999999999998 5554433333 33345899999888 455566799999999988888775
Q ss_pred hHhheeecCCchHhhhcCCHHHHHHHHHhhCCCcCCccchhhhhhhccCCCCcccccccccchhhhhhhhcchhHHHHHH
Q 041759 249 GLLYIFVSESPRWLFMQGRQEEAVEVIKSLSPIKDSNQLSLSLVSAVSFGHEPAASSKESSFLSSIRELFVRRWALERTL 328 (525)
Q Consensus 249 ~~~~~~lpesp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~ 328 (525)
+...+++|.+.....+.+.++... .... ..... +..++.....++.+++|..++.++
T Consensus 203 -~~~~~~~E~~~~~~~~~~~~~~~~-~~~~-----~~~~~----------------~~~~~~~~~l~~~l~~~~i~~~l~ 259 (468)
T TIGR00788 203 -FVSNLSKERRAFVRPRIGTYLEMN-MALL-----TLGVL----------------ANVKVQILGLRGAIQLLEIAKPLI 259 (468)
T ss_pred -HHHHhcccccccccccccccchhh-hhhh-----hhhHH----------------HHHHHHHHHHHHHHhcHHHHHHHH
Confidence 666777885310000000000000 0000 00000 000000124555677787666555
Q ss_pred HHHH-HHHHHHHHHhhhhhcccccCChhHHHHHHHHHhcccccccCchhHHHHHHHHHhhcChhHHHHHHHHHHHHHHHH
Q 041759 329 ALMV-PGFGIGVVYYGMTLGIENLGFDIYLGVVFNALLEIPNLASTIPSFFLTFFLIQKWNRKSSLLVLFIISGICSIMA 407 (525)
Q Consensus 329 ~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~d~~g~~~~~~~~~~~~~~~~~~~ 407 (525)
..++ .....+.......+.....|.++...+.......+ +.+++..+.+++.+|++.|+.+.++.++.+++.+..
T Consensus 260 fifl~~~~~~~~~~~~f~~~~~~lG~s~~~~G~~~~~~~v----~~i~g~~~~~~~~~~~~~r~~l~~~~~l~~~~~~~~ 335 (468)
T TIGR00788 260 FIFLSYANLPGASGSVFCATTQCLPGGPSFSGMSKVVGNL----GSLCGVGGYDRFLKTFPYRLLFGVTTLLYTLSSLFD 335 (468)
T ss_pred HHHHHHhhcCCCCceeEEEEcccCCCCcchhhhHHHHHHH----HHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHHhCc
Confidence 4444 22111111111012224578888888888777766 777999999999999999999999988888877554
Q ss_pred HHhccc----c-ccchhHHHHHHHHHHHHHHHHHHHHHhhhccccCcchhhhhhHHHHHHHHHHHHHHHHHHh
Q 041759 408 VVANDI----S-NAGKRMRIGLELASLFSAYIAYTVIFIYAIELFPTCVRNSATSIMRLAIIFAAIFSSVLVA 475 (525)
Q Consensus 408 ~~~~~~----~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~r~~~~~~~~~~~~~g~~~~p~i~~ 475 (525)
...... . -.+........++..++.+..+.....++.+..|++.+|+.+++.+.+.++|..+++.+.+
T Consensus 336 ~~l~~~~~~~~gi~~~~~~~~~~~l~~~~~g~~~~~~~~~~~~~~p~~~egt~~al~~s~~~lg~~v~~~~gg 408 (468)
T TIGR00788 336 LILVKRWNLAFGISDEVFVLGDSIIAEVLAQLKFMPFLVLLARLCPSGCESSVFALLASILHLGSSVSGFLGV 408 (468)
T ss_pred eeeeeccccccCCCCeeeeeehhHHHHHHHHHHHccHHHHHHHhCCCCceehHHHHHHHHHHHHHHHHHHHHH
Confidence 321100 0 0112234455667777777778888999999999999999999999999999999998776
No 104
>PRK10429 melibiose:sodium symporter; Provisional
Probab=99.88 E-value=4.9e-20 Score=185.90 Aligned_cols=333 Identities=9% Similarity=0.013 Sum_probs=220.6
Q ss_pred ccceeeccccccchhhhhhhHHHHHHHHHHHhHHhhHhcccc---cCCc-hHHHHHHHHHHHHHHHHHHhhh------hH
Q 041759 100 ALTIISEWGLECSSAFIKGLPAASHFTGCLLGIVFLATLADS---SLGR-KNLLFLSCLTMSVATSLTIFSN------NL 169 (525)
Q Consensus 100 ~~~i~~~~~~~~~s~~~~g~~~s~~~lg~~~~~~~~G~l~dr---~~Gr-k~~~~~~~~~~~i~~~~~~~~~------~~ 169 (525)
...+.+.+|+ +...+|.+..+..+.-++..|+.|+++|| |+|| |+.++++.+..+++.++....+ .+
T Consensus 30 ~~yyt~v~Gl---s~~~vg~i~~i~ri~dai~dp~~G~lsD~t~sr~Grrrp~il~g~i~~~i~~~llf~~p~~~~~~~~ 106 (473)
T PRK10429 30 MYYYTDVVGL---SVGLVGTLFLVARIWDAINDPIMGWIVNNTRSRWGKFKPWILIGTLANSVVLFLLFSAHLFEGTAQY 106 (473)
T ss_pred HHHHHHhcCC---CHHHHHHHHHHHHHHHHHhhchheeehhcCCCCCCCcchhHhhhhHHHHHHHHHHHcCCCCCccHHH
Confidence 4455667799 99999999999999999999999999994 2798 6677778888888866664432 24
Q ss_pred HHHHHHHHHHhhcccchhhhhheeeEeee-cCcchhhHHhHHHHHHHHHHHHHHHHHH-h---c----cCCchHHHHHHH
Q 041759 170 WIYSLLRFFSGISRATIGTCTIVLLTEKV-GTEWRGLVGILDSFFFTIGTLTLPAIAY-T---N----RSSSWTIIYLWT 240 (525)
Q Consensus 170 ~~l~~~r~l~G~~~~~~~~~~~~~i~~~~-~~~~r~~~~~~~~~~~~~G~~l~~~l~~-~---~----~~~~wr~~f~~~ 240 (525)
.++++..++.+++.....+...+++.|+. ++++|.+..++...+.++|..+.+.+.. + . ...+|+....+.
T Consensus 107 ~~~~~~~~l~~~~~t~~~ip~~al~~~lt~~~~eR~~l~~~~~~~~~ig~~~~~~~~~~~~~~~g~~~~~~g~~~~~~i~ 186 (473)
T PRK10429 107 VFVCVTYILWGMTYTIMDIPFWSLVPTLTLDKREREQLVPYPRFFASLAGFVTAGFTLPFVNYVGGGDRGFGFQMFTLVL 186 (473)
T ss_pred HHHHHHHHHHHHHHHHHcchHHhhhHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCchhhhHHHHHHHH
Confidence 46667777888888888888889999998 5899999999877777777555544321 1 1 123688887777
Q ss_pred HHHHHHHHhHhheeecCCchHhhhcCCHHHHHHHHHhhCCCcCCccchhhhhhhccCCCCcccccccccchhhhhhhhcc
Q 041759 241 SIPTLVYSGLLYIFVSESPRWLFMQGRQEEAVEVIKSLSPIKDSNQLSLSLVSAVSFGHEPAASSKESSFLSSIRELFVR 320 (525)
Q Consensus 241 ~~~~~~~~~~~~~~lpesp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 320 (525)
+++.++..++.++..+|.+.. ++.+. .. +++.+....++.+++|
T Consensus 187 ~~~~~~~~~~~~~~~~e~~~~----~~~~~-----------~~---------------------~~~~~~~~~~~~~~~n 230 (473)
T PRK10429 187 IAFFIVSTIITLRNVHEVYSS----DNQVS-----------AE---------------------GSHLTLKDIVALIYKN 230 (473)
T ss_pred HHHHHHHHHHHHcCceecCCc----ccccc-----------cc---------------------ccCCCHHHHHHHHhcC
Confidence 777776664556656664210 00000 00 0000011355667788
Q ss_pred hhHHHHHHHHHHHHHHHHHHHhhhhhcccccCChhHHHHHHHHHhcccccccCchhHHHHHHHHHhhcChhHHHHHHHHH
Q 041759 321 RWALERTLALMVPGFGIGVVYYGMTLGIENLGFDIYLGVVFNALLEIPNLASTIPSFFLTFFLIQKWNRKSSLLVLFIIS 400 (525)
Q Consensus 321 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~d~~g~~~~~~~~~~~~ 400 (525)
|.++..+...++............+++.+....+......+.....+ +.+++.++.+++.||+|+|+.+.++..+.
T Consensus 231 ~~~~~ll~~~~~~~~~~~~~~~~~~y~~~y~~~~~~~~~~~~~~~~i----~~ii~~~~~~~l~~r~gkk~~~~~~~~~~ 306 (473)
T PRK10429 231 DQLSCLLGMALAYNIASNIINGFAIYYFTYVIGDADLFPYYLSYAGA----ANLVTLILFPRLVKSLSRRILWAGASIFP 306 (473)
T ss_pred HHHHHHHHHHHHHHHHHHHHhhheeeEEEEECCCHHHHHHHHHHHHH----HHHHHHHHHHHHHHHcCcHHHHHHHHHHH
Confidence 87666666555555544444333445554433344444444443334 55688899999999999999998888776
Q ss_pred HHHHHHHHHhccccccchhHHHHHHHHHHHHHHHHHHHHHhhhccccC-------cchhhhhhHHHHHHHHHHHHHHHHH
Q 041759 401 GICSIMAVVANDISNAGKRMRIGLELASLFSAYIAYTVIFIYAIELFP-------TCVRNSATSIMRLAIIFAAIFSSVL 473 (525)
Q Consensus 401 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p-------~~~r~~~~~~~~~~~~~g~~~~p~i 473 (525)
.++.+.+.........+....++..++.+++.+..++..+++.+|..+ .+..|...|.......+|..+++.+
T Consensus 307 ~~~~~~~~~~~~~~~~~~~~~~i~~~l~g~~~~~~~~~~~am~ad~id~~e~~tG~R~~G~~~s~~~~~~K~~~al~~~i 386 (473)
T PRK10429 307 VLSCGVLLLMGLAAPHNALLIVIAGILLNIGTALFWVLQVIMVADTVDYGEYKLGIRCESIAYSVQTMVVKGGSAFAAFF 386 (473)
T ss_pred HHHHHHHHHHhccCchhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhhHhcCccchhHHHHHHHHHHHHHHHHHHHH
Confidence 655554433210001123345556667778888888888999999865 3344567788888888888888877
Q ss_pred Hh
Q 041759 474 VA 475 (525)
Q Consensus 474 ~~ 475 (525)
.|
T Consensus 387 ~g 388 (473)
T PRK10429 387 IG 388 (473)
T ss_pred HH
Confidence 76
No 105
>KOG4686 consensus Predicted sugar transporter [Carbohydrate transport and metabolism]
Probab=99.87 E-value=1.1e-21 Score=170.55 Aligned_cols=360 Identities=10% Similarity=0.006 Sum_probs=231.1
Q ss_pred ecCCCCccccceeeccccccchhhhhhhHHHHHHHHHHHhHHhhHhcccccCCchHHHHHHHHHHHHHHHHHH---hhhh
Q 041759 92 WDGNPTTTALTIISEWGLECSSAFIKGLPAASHFTGCLLGIVFLATLADSSLGRKNLLFLSCLTMSVATSLTI---FSNN 168 (525)
Q Consensus 92 ~~~~p~~~~~~i~~~~~~~~~s~~~~g~~~s~~~lg~~~~~~~~G~l~dr~~Grk~~~~~~~~~~~i~~~~~~---~~~~ 168 (525)
||. |.....+++.|.|+ +..+..++.++|...-.+.++++|++.||++|-|..-++-+....+|.+..+ ..+.
T Consensus 60 yd~-p~alq~~fk~d~ni---~~akftLlYsvYSwPNvVlcffgGflidr~fgir~gtii~~~fv~~GqliFa~Ggi~~a 135 (459)
T KOG4686|consen 60 YDA-PGALQIDFKLDSNI---EYAKFTLLYSVYSWPNVVLCFFGGFLIDRRFGIRLGTIILCIFVFLGQLIFAAGGISHA 135 (459)
T ss_pred cCC-chhhhhhhhccccc---ceeeeeeeeeeccCCCEEEeeecceeehhhhhhhHHHHHHHHHHHHHHHHHHhchHHHH
Confidence 444 55446778888888 8889999999999999999999999999989988776666666667776655 4689
Q ss_pred HHHHHHHHHHHhhcccchhhhhheeeEeeecCcchhhHHhHHHHHHHHHHHHHHHH-HHh-------ccCCchH-----H
Q 041759 169 LWIYSLLRFFSGISRATIGTCTIVLLTEKVGTEWRGLVGILDSFFFTIGTLTLPAI-AYT-------NRSSSWT-----I 235 (525)
Q Consensus 169 ~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~l~~~l-~~~-------~~~~~wr-----~ 235 (525)
+|.++++|++.|+|.-.....-..|+.-|+..|+.+.++++.....-+|..+-..+ .++ .+..+-. .
T Consensus 136 Fw~M~~GRF~FGIGgESlAVaQN~yav~wFKGKELn~vfGlqlSvAR~GstvNf~lm~~ly~~~~~~~~~~ghT~LG~~l 215 (459)
T KOG4686|consen 136 FWTMLAGRFLFGIGGESLAVAQNKYAVYWFKGKELNFVFGLQLSVARLGSTVNFLLMPFLYDTMGRMFPGVGHTLLGLWL 215 (459)
T ss_pred HHHHHhhheeeccCchhhhhhhcceeEEEecCccccchhhHHHHHHHhhceeeeeecHHHHHHHHHhcccchHHHHHHHH
Confidence 99999999999999988888888999999999999999999998888887653322 111 1111111 1
Q ss_pred HH-HHHHHHHHHHHhHhheeecCCchHhhhcCCHHHHHHHHHhhCCCcCCccchhhhhhhccCCCCcccccccccchhhh
Q 041759 236 IY-LWTSIPTLVYSGLLYIFVSESPRWLFMQGRQEEAVEVIKSLSPIKDSNQLSLSLVSAVSFGHEPAASSKESSFLSSI 314 (525)
Q Consensus 236 ~f-~~~~~~~~~~~~~~~~~lpesp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 314 (525)
.+ .......++.+ ... .-..+++++.+++. ++.... +++ -.-
T Consensus 216 ~~~~~tc~~slica-l~l------------g~~D~rAerilh~e---~g~~Ge------------~pk---------Ltd 258 (459)
T KOG4686|consen 216 CFEVKTCKQSLICA-LSL------------GLSDDRAERILHLE---EGFLGE------------EPK---------LTD 258 (459)
T ss_pred HHHHHHHHHHHHHH-HHh------------hhhhhHHHHHHhhh---cCcccC------------Ccc---------ccc
Confidence 11 11111122221 110 00112222222221 111000 000 000
Q ss_pred hhhhcchhHHHHHHHHHHHHHHHHHHHhh--hhhcccccCChhHHHHHHHHHhcccccccCchhHHHHHHHHHhhcChhH
Q 041759 315 RELFVRRWALERTLALMVPGFGIGVVYYG--MTLGIENLGFDIYLGVVFNALLEIPNLASTIPSFFLTFFLIQKWNRKSS 392 (525)
Q Consensus 315 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~d~~g~~~~ 392 (525)
..-++ |.+|...++++..+. ..+.++. ..++.+.+|.++..++.+.+.... -+.+..++.|.++||+|++..
T Consensus 259 v~~f~-ppfw~~~iicv~yyv-a~fPFi~lg~~fF~~rfGlS~~~a~~i~s~vy~----Isav~spvfg~i~Dk~G~n~~ 332 (459)
T KOG4686|consen 259 VNTFY-PPFWVLVIICVLYYV-AWFPFITLGPMFFQKRFGLSAVSAGNILSTVYG----ISAVLSPVFGAISDKYGFNLW 332 (459)
T ss_pred ccccC-ccHHHHHHHHHHHHH-HHHHHhhhhHHHHHHhhCCChhhccchhhhhhh----hhhhhhhhHHHhHhhhcceeh
Confidence 11122 334544444433333 3333333 245566799999888888887777 666788899999999999987
Q ss_pred HHHHHHHHHHHHHHHHHhccccccchhHHHHHHHHHHHHHHHHHHHHHhhhccccCcchhhhhhHHHHHHHHHHHHHHHH
Q 041759 393 LLVLFIISGICSIMAVVANDISNAGKRMRIGLELASLFSAYIAYTVIFIYAIELFPTCVRNSATSIMRLAIIFAAIFSSV 472 (525)
Q Consensus 393 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~r~~~~~~~~~~~~~g~~~~p~ 472 (525)
.+.+..+..+..-....+... ..+..+.+.|......-...|..++.+.|+++.|++.|+.+.+.++|-.+.|+
T Consensus 333 wv~~a~~~tl~~H~~l~Ft~l------sPy~~m~~lGLsysllAcslWP~va~~vpE~qLGTaygf~qsIqNLgla~i~I 406 (459)
T KOG4686|consen 333 WVASACILTLLGHSGLFFTFL------SPYTSMTFLGLSYSLLACSLWPCVASLVPEEQLGTAYGFIQSIQNLGLAFIPI 406 (459)
T ss_pred hHHHHHHHHHHHhhhHHhhhc------cHHHHHHHHhhhHHHHHHHHhhhhhhhCCHHHhcchHHHHHHHHhhhhhHHhh
Confidence 777666555443333332222 23445556666666665667888888999999999999999999999999999
Q ss_pred HHhhcc--C----chhHHHHHHHHHHHHHHHHHHhccC
Q 041759 473 LVAAGS--N----NEFVSYGVFGLVIICCGFFVICLPE 504 (525)
Q Consensus 473 i~~~~~--~----~~~~~~~~~~~~~~~~~~~~~~~~~ 504 (525)
+.|... . +....|++++.+.+....+.+++.+
T Consensus 407 iag~i~d~~g~y~~le~ffl~~~~~aL~svgil~~~N~ 444 (459)
T KOG4686|consen 407 IAGFIADGDGSYDNLEAFFLIIGLMALTSVGILFYLNK 444 (459)
T ss_pred hhheeecCCCchhhHHHHHHHHHHHHHHHHHHHhheec
Confidence 999521 1 2234455555555555555555533
No 106
>PRK09848 glucuronide transporter; Provisional
Probab=99.86 E-value=6.4e-19 Score=177.06 Aligned_cols=324 Identities=12% Similarity=0.043 Sum_probs=209.6
Q ss_pred ccceeeccccccchhhhhhhHHHHHHHHHHHhHHhhHhcccc---cCCchHHH-HHHHHHHHHHHHHHHh-----hh--h
Q 041759 100 ALTIISEWGLECSSAFIKGLPAASHFTGCLLGIVFLATLADS---SLGRKNLL-FLSCLTMSVATSLTIF-----SN--N 168 (525)
Q Consensus 100 ~~~i~~~~~~~~~s~~~~g~~~s~~~lg~~~~~~~~G~l~dr---~~Grk~~~-~~~~~~~~i~~~~~~~-----~~--~ 168 (525)
...+++.+|+ +..++|++.+...+..++..++.|+++|| |+||||.+ .++.+...+..++... ++ .
T Consensus 32 ~~y~~~~~gl---~~~~~g~~~~~~~~~~~~~~~~~G~l~Dr~~~~~Gr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 108 (448)
T PRK09848 32 LSYYTDVAGV---GAAAAGTMLLLVRVFDAFADVFAGRVVDSVNTRWGKFRPFLLFGTAPLMIFSVLVFWVPTDWSHSSK 108 (448)
T ss_pred HHHHHHHcCC---CHHHHHHHHHHHHHHHHHhhhhheeeeecCCCCCcCchHHHHHHHHHHHHHHHHHHhCcCCCCcchH
Confidence 4466677899 99999999999999999999999999999 23877754 5565555544444321 11 2
Q ss_pred HHHHHHHHHHHhhcccchhhhhheeeEeeecC-cchhhHHhHHHHHH-----HHHHHHHHHHHHhccC---CchHHHHHH
Q 041759 169 LWIYSLLRFFSGISRATIGTCTIVLLTEKVGT-EWRGLVGILDSFFF-----TIGTLTLPAIAYTNRS---SSWTIIYLW 239 (525)
Q Consensus 169 ~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~-~~r~~~~~~~~~~~-----~~G~~l~~~l~~~~~~---~~wr~~f~~ 239 (525)
.+.+++..++.+++.+...+...++..+...+ ++|.+..++-..+. .+|..++|+++..... .+|.....+
T Consensus 109 ~~~~~~~~~~~~~~~~~~~~~~~al~~~~~~~~~~r~~~~~~r~~~~~~~~~~~~~~~~p~i~~~~g~~~~~~~~~~~~~ 188 (448)
T PRK09848 109 VVYAYLTYMGLGLCYSLVNIPYGSLATAMTQQPQSRARLGAARGIAASLTFVCLAFLIGPSIKNSSPEEMVSVYHFWTIV 188 (448)
T ss_pred HHHHHHHHHHHHHHHHHhcccHhhhhhhhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCchhhhHHHHHHH
Confidence 34455566777888888887777777776654 67888776665443 3555666766544321 123222233
Q ss_pred HHHHHHHHHhHhheeecCCchHhhhcCCHHHHHHHHHhhCCCcCCccchhhhhhhccCCCCcccccccccchhhhhhhhc
Q 041759 240 TSIPTLVYSGLLYIFVSESPRWLFMQGRQEEAVEVIKSLSPIKDSNQLSLSLVSAVSFGHEPAASSKESSFLSSIRELFV 319 (525)
Q Consensus 240 ~~~~~~~~~~~~~~~lpesp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 319 (525)
.+++.++..++.....||++. + + .++ .+....++.+++
T Consensus 189 ~~v~~~~~~~~~~~~~~e~~~----~-~--------------~~~-----------------------~~~~~~~~~l~~ 226 (448)
T PRK09848 189 LAIAGMVLYFICFKSTRENVV----R-I--------------VAQ-----------------------PSLKISLQTLKR 226 (448)
T ss_pred HHHHHHHHHHHHHcCcEeccC----C-C--------------ccC-----------------------CCHHHHHHHHhC
Confidence 344444433344444555421 0 0 000 000135778899
Q ss_pred chhHHHHHHHHHHHHHHHHHHHhhhhhcccc-cCChhHHHHHHHHHhcccccccCchhHHHHHHHHHhhcChhHHHHHHH
Q 041759 320 RRWALERTLALMVPGFGIGVVYYGMTLGIEN-LGFDIYLGVVFNALLEIPNLASTIPSFFLTFFLIQKWNRKSSLLVLFI 398 (525)
Q Consensus 320 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~d~~g~~~~~~~~~~ 398 (525)
+|.++...+..++............+++.++ +|.+............+ +.+++.++.+++.||+|+|+.+.++.+
T Consensus 227 n~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~----~~~~~~~l~~~l~~r~g~~~~~~~g~~ 302 (448)
T PRK09848 227 NRPLFMLCIGALCVLISTFAVSASSLFYVRYVLNDTGLFTVLVLVQNLV----GTVASAPLVPGMVARIGKKNTFLIGAL 302 (448)
T ss_pred CchHHHHHHHHHHHHHHHHHHhhhheeeEeeecCChHHHHHHHHHHHHH----HHHHHHHHHHHHHHHhCcHHHHHHHHH
Confidence 9987776666666655555444455666554 56554443332222222 455788899999999999999999988
Q ss_pred HHHHHHHHHHHhccccccchhHHHHHHHHHHHHHHHHHHHHHhhhccccCcc-------hhhhhhHHHHHHHHHHHHHHH
Q 041759 399 ISGICSIMAVVANDISNAGKRMRIGLELASLFSAYIAYTVIFIYAIELFPTC-------VRNSATSIMRLAIIFAAIFSS 471 (525)
Q Consensus 399 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~-------~r~~~~~~~~~~~~~g~~~~p 471 (525)
+..++.+.+.+.+.. +.+...+..++.+++.+...+...++.+|..|.+ .+|...|+.+....+|..+++
T Consensus 303 ~~~i~~~~~~~~~~~---~~~~~~~~~~l~g~G~~~~~~~~~al~~~~~~~~~~~~g~r~~G~~~~~~~~~~klg~aig~ 379 (448)
T PRK09848 303 LGTCGYLLFFWVSVW---SLPVALVALAIASIGQGVTMTVMWALEADTVEYGEYLTGVRIEGLTYSLFSFTRKCGQAIGG 379 (448)
T ss_pred HHHHHHHHHHHcCch---hHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhHHhhCccchhHHHHHHHHHHHHHHHHHH
Confidence 888777666554322 2334455566778888888888888888887643 458888999999999998888
Q ss_pred HHHh
Q 041759 472 VLVA 475 (525)
Q Consensus 472 ~i~~ 475 (525)
.+.+
T Consensus 380 ~i~g 383 (448)
T PRK09848 380 SIPA 383 (448)
T ss_pred HHHH
Confidence 8776
No 107
>PRK11462 putative transporter; Provisional
Probab=99.84 E-value=2.2e-18 Score=172.55 Aligned_cols=324 Identities=8% Similarity=-0.020 Sum_probs=204.1
Q ss_pred ccceeeccccccchhhhhhhHHHHHHHHHHHhHHhhHhcccc---cCCchH-HHHHHHHHHHHHHHHHHhhhh------H
Q 041759 100 ALTIISEWGLECSSAFIKGLPAASHFTGCLLGIVFLATLADS---SLGRKN-LLFLSCLTMSVATSLTIFSNN------L 169 (525)
Q Consensus 100 ~~~i~~~~~~~~~s~~~~g~~~s~~~lg~~~~~~~~G~l~dr---~~Grk~-~~~~~~~~~~i~~~~~~~~~~------~ 169 (525)
...+.+.+|+ +...+|.+..+.-+--++..|+.|.++|| |+|||| .++++.+..+++.+++...++ .
T Consensus 33 ~~fyt~~~Gl---~~~~~g~i~~~~ri~Dai~Dp~~G~~~D~t~~r~Gr~rp~il~g~i~~~i~~~llf~~p~~s~~~~~ 109 (460)
T PRK11462 33 MFFYTDIFGI---PAGFVGTMFLVARALDAISDPCMGLLADRTRSRWGKFRPWVLFGALPFGIVCVLAYSTPDLSMNGKM 109 (460)
T ss_pred HHHHHHhhCC---CHHHHHHHHHHHHHHHHHHhhhheehhccCCCCCCCcchhHhHHHHHHHHHHHHHHhCCCCCcchHH
Confidence 3445567799 99999999999999999999999999997 589865 556677888888777655442 4
Q ss_pred HHHHHHHHHHhhcccchhhhhheeeEeeec-CcchhhHHhHHHHHHHHHHHHHHHHHH-hc---c----CCchHHHHHHH
Q 041759 170 WIYSLLRFFSGISRATIGTCTIVLLTEKVG-TEWRGLVGILDSFFFTIGTLTLPAIAY-TN---R----SSSWTIIYLWT 240 (525)
Q Consensus 170 ~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~-~~~r~~~~~~~~~~~~~G~~l~~~l~~-~~---~----~~~wr~~f~~~ 240 (525)
.++.+.-++..++.........++..|+.+ +++|++..++...+..+|..+++.+.. +. . ..+|+....+.
T Consensus 110 ~y~~~~~~~~~~~~t~~~ipy~al~~~lt~d~~eRt~l~s~r~~~~~iG~~~~~~~~~plv~~~g~~~~~~g~~~~~~i~ 189 (460)
T PRK11462 110 IYAAITYTLLTLLYTVVNIPYCALGGVITNDPTQRISLQSWRFVLATAGGMLSTVLMMPLVNLIGGDNKPLGFQGGIAVL 189 (460)
T ss_pred HHHHHHHHHHHHHHHHHhccHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCchhhhHHHHHHHH
Confidence 566777777888888888888889999887 689999999999999998877765522 11 1 13688888887
Q ss_pred HHHHHHHHhHhheeecCCchHhhhcCCHHHHHHHHHhhCCCcCCccchhhhhhhccCCCCcccccccccchhhhhhhhcc
Q 041759 241 SIPTLVYSGLLYIFVSESPRWLFMQGRQEEAVEVIKSLSPIKDSNQLSLSLVSAVSFGHEPAASSKESSFLSSIRELFVR 320 (525)
Q Consensus 241 ~~~~~~~~~~~~~~lpesp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 320 (525)
+++.++..++.+...+|.++. +.++ .+..+.++.+++|
T Consensus 190 ~ii~~i~~~i~~~~~kE~~~~-----~~~~-------------------------------------~~~~~~l~~~~~N 227 (460)
T PRK11462 190 SVVAFMMLAFCFFTTKERVEA-----PPTT-------------------------------------TSMREDLRDIWQN 227 (460)
T ss_pred HHHHHHHHHHHHhcceeccCC-----CccC-------------------------------------CCHHHHHHHHhCC
Confidence 877776664555555553210 0000 0001356677888
Q ss_pred hhHHHHHHHHHHHHHHHHHHHhhhhhcccccCChhHHHHHHHHHhcccccccCchhHHHHHHHHHhhcChhHHHHHHHHH
Q 041759 321 RWALERTLALMVPGFGIGVVYYGMTLGIENLGFDIYLGVVFNALLEIPNLASTIPSFFLTFFLIQKWNRKSSLLVLFIIS 400 (525)
Q Consensus 321 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~d~~g~~~~~~~~~~~~ 400 (525)
+.++......++.............++......+......+.....+ +.+++.++++++.||+++|+....+..+.
T Consensus 228 k~~~~l~~~~~~~~~~~~~~~~~~~y~~~y~~g~~~~~~~~l~~~~i----~~iig~~l~~~l~~r~gkk~~~~~~~~~~ 303 (460)
T PRK11462 228 DQWRIVGLLTIFNILAVCVRGGAMMYYVTWILGTPEVFVAFLTTYCV----GNLIGSALAKPLTDWKCKVTIFWWTNALL 303 (460)
T ss_pred hHHHHHHHHHHHHHHHHHHHHhHhhhhhhhhcCChHHHHHHHHHHHH----HHHHHHHHHHHHHHHhChHHHHHHHHHHH
Confidence 87655544433333332222222222222221122222233333333 55588899999999999998876555544
Q ss_pred HHHHHHHHHhccccccchhHHHHHHHHHHHHHHHHHHHHHhhhccccC-------cchhhhhhHHHHHHHHHHHHHHHHH
Q 041759 401 GICSIMAVVANDISNAGKRMRIGLELASLFSAYIAYTVIFIYAIELFP-------TCVRNSATSIMRLAIIFAAIFSSVL 473 (525)
Q Consensus 401 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p-------~~~r~~~~~~~~~~~~~g~~~~p~i 473 (525)
.+..+++.+.+.. +....++..++.+++.+...+..+++.+|..+ .+..|...+.......+|..+++.+
T Consensus 304 ~~~~~~~~~~~~~---~~~~~~~~~~l~g~~~~~~~~l~~~m~ad~~d~~e~~tG~r~~g~~~a~~~f~~Klg~alg~~i 380 (460)
T PRK11462 304 AVISLAMFFVPMQ---ASITMFVFIFVIGVLHQLVTPIQWVMMSDTVDYGEWCNGKRLTGISFAGTLFVLKLGLAFGGAL 380 (460)
T ss_pred HHHHHHHHHhchh---HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHhhhHHhcCCCchHHHHHHHHHHHHHHHHHHHHH
Confidence 4433333333322 12223334455566666666666777777755 2233444566556677777776666
Q ss_pred Hh
Q 041759 474 VA 475 (525)
Q Consensus 474 ~~ 475 (525)
.|
T Consensus 381 ~g 382 (460)
T PRK11462 381 IG 382 (460)
T ss_pred HH
Confidence 54
No 108
>COG2211 MelB Na+/melibiose symporter and related transporters [Carbohydrate transport and metabolism]
Probab=99.84 E-value=3.8e-18 Score=164.07 Aligned_cols=329 Identities=12% Similarity=0.059 Sum_probs=238.5
Q ss_pred ccceeeccccccchhhhhhhHHHHHHHHHHHhHHhhHhcccc---cCCc-hHHHHHHHHHHHHHHHHHHhhh------hH
Q 041759 100 ALTIISEWGLECSSAFIKGLPAASHFTGCLLGIVFLATLADS---SLGR-KNLLFLSCLTMSVATSLTIFSN------NL 169 (525)
Q Consensus 100 ~~~i~~~~~~~~~s~~~~g~~~s~~~lg~~~~~~~~G~l~dr---~~Gr-k~~~~~~~~~~~i~~~~~~~~~------~~ 169 (525)
+--..+.+|+ +...+|.+..+--+--++.-|+.|.+.|| |+|| |+.++.+.+.+++.+.++..++ +.
T Consensus 36 l~fYTdv~Gi---s~~~aG~iflv~RiiDAi~DP~~G~i~D~t~~r~GrfRP~lL~g~ip~~i~~~l~F~~p~~~~~~k~ 112 (467)
T COG2211 36 LFFYTDVFGL---SAALAGTIFLVARIIDAITDPIMGFIVDRTRSRWGRFRPWLLWGAIPFAIVAVLLFITPDFSMTGKL 112 (467)
T ss_pred HHHHhcccCC---cHHHHHHHHHHHHHHHHHhcchheeeecccccccccccHHHHHHhHHHHHHHHHHHcCCCcccCcch
Confidence 3345567889 99999999999999999999999999998 6998 5567778899999999888876 35
Q ss_pred HHHHHHHHHHhhcccchhhhhheeeEeeec-CcchhhHHhHHHHHHHHHHHHHHHH-----HHhcc---CCchHHHHHHH
Q 041759 170 WIYSLLRFFSGISRATIGTCTIVLLTEKVG-TEWRGLVGILDSFFFTIGTLTLPAI-----AYTNR---SSSWTIIYLWT 240 (525)
Q Consensus 170 ~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~-~~~r~~~~~~~~~~~~~G~~l~~~l-----~~~~~---~~~wr~~f~~~ 240 (525)
...++...+.+++......+..++..|+.+ ++||.+..++-+.+.++|.++...+ ..+-. ..||+..-.+.
T Consensus 113 ~ya~vtY~l~~l~YT~vniPy~al~~~iT~d~~ER~~l~s~R~~~~~~g~~l~~~~~~plv~~~g~~~~~~g~~~~~~~~ 192 (467)
T COG2211 113 IYALVTYMLLGLGYTLVNIPYGALGPEITQDPQERASLTSWRMVFASLGGLLVAVLFPPLVKLFGGGDKALGYQGTALVL 192 (467)
T ss_pred HHHHHHHHHHHHHHHheeCchhhcchhhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCcchhhHHHHHHHH
Confidence 677888899999999999999999999886 5899999999999999996654333 33322 45899999999
Q ss_pred HHHHHHHHhHhheeecCCchHhhhcCCHHHHHHHHHhhCCCcCCccchhhhhhhccCCCCcccccccccchhhhhhhhcc
Q 041759 241 SIPTLVYSGLLYIFVSESPRWLFMQGRQEEAVEVIKSLSPIKDSNQLSLSLVSAVSFGHEPAASSKESSFLSSIRELFVR 320 (525)
Q Consensus 241 ~~~~~~~~~~~~~~lpesp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 320 (525)
+++..+..+++++.++|.+.. +...+ + ..+++....+..+++|
T Consensus 193 ~vi~~i~~l~~~~~v~ER~~~---~~~~~-------------~---------------------~~~~~~~~~~~~~~~N 235 (467)
T COG2211 193 GVIGVILLLFCFFNVKERVVE---TQPTK-------------T---------------------GVKLKLKDSFLLIFKN 235 (467)
T ss_pred HHHHHHHHHHHHHHhhcccCc---cccCc-------------c---------------------cccccHHHHHHHHHcc
Confidence 988888887777777774320 00000 0 0000011345568889
Q ss_pred hhHHHHHHHHHHHHHHHHHHHhhhhhcccc-cCChhHHHHHHHHHhcccccccCchhHHHHHHHHHhhcChhHHHHHHHH
Q 041759 321 RWALERTLALMVPGFGIGVVYYGMTLGIEN-LGFDIYLGVVFNALLEIPNLASTIPSFFLTFFLIQKWNRKSSLLVLFII 399 (525)
Q Consensus 321 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~d~~g~~~~~~~~~~~ 399 (525)
+.++...+..++...+.+.......++.+. +|.+............. +.+++.++..++.+|+|+|+++.++.++
T Consensus 236 rp~~~~l~~~l~~~~~~~i~~s~~~yy~~y~lg~~~l~~~~~~~~~~~----~~l~~~~~~p~L~~~~gkk~~~~~~~~~ 311 (467)
T COG2211 236 RPLLLLLLMNLLLFIAFNIRGSIMVYYVTYVLGDPELFAYLLLLASGA----GLLIGLILWPRLVKKFGKKKLFLIGLLL 311 (467)
T ss_pred chHHHHHHHHHHHHHHHHHHhhhhheeEEEEcCChHHHHHHHHHHHHH----HHHHHHHhHHHHHHHhchHHHHHHHHHH
Confidence 887766665555554444443333444333 44444444444333333 4447789999999999999999999999
Q ss_pred HHHHHHHHHHhccccccchhHHHHHHHHHHHHHHHHHHHHHhhhccccC-------cchhhhhhHHHHHHHHHHHHHHHH
Q 041759 400 SGICSIMAVVANDISNAGKRMRIGLELASLFSAYIAYTVIFIYAIELFP-------TCVRNSATSIMRLAIIFAAIFSSV 472 (525)
Q Consensus 400 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p-------~~~r~~~~~~~~~~~~~g~~~~p~ 472 (525)
..++.+++.+.+.. +....++..++.+++.+...++.+++.+|..+ .+..|...+...++.-+|..++..
T Consensus 312 ~~i~~~~~~f~~~~---~~~l~~~~~~i~~~g~~~~~~l~wam~~d~vDyge~~TG~R~eGi~~s~~tF~~K~g~ala~~ 388 (467)
T COG2211 312 LAVGYLLLYFTPAG---SVVLIVVALIIAGVGTGIANPLPWAMVADTVDYGEWKTGVRREGIVYSGMTFFRKLGLALAGF 388 (467)
T ss_pred HHHHHHHHHhhcCc---chHHHHHHHHHHHHHhhccccccHHHhcchhhHHHHHhCCCchhhHHHHHHHHHHHHHHHHHH
Confidence 99999998888743 34466667788889999999999999998854 334567778878777777776665
Q ss_pred HHh
Q 041759 473 LVA 475 (525)
Q Consensus 473 i~~ 475 (525)
+.|
T Consensus 389 ~~g 391 (467)
T COG2211 389 IPG 391 (467)
T ss_pred HHH
Confidence 554
No 109
>PF13347 MFS_2: MFS/sugar transport protein
Probab=99.84 E-value=2.2e-19 Score=179.12 Aligned_cols=326 Identities=15% Similarity=0.131 Sum_probs=241.4
Q ss_pred ccceeeccccccchhhhhhhHHHHHHHHHHHhHHhhHhcccc---cCCchH-HHHHHHHHHHHHHHHHHhh-h-------
Q 041759 100 ALTIISEWGLECSSAFIKGLPAASHFTGCLLGIVFLATLADS---SLGRKN-LLFLSCLTMSVATSLTIFS-N------- 167 (525)
Q Consensus 100 ~~~i~~~~~~~~~s~~~~g~~~s~~~lg~~~~~~~~G~l~dr---~~Grk~-~~~~~~~~~~i~~~~~~~~-~------- 167 (525)
.+-+.+.+++ ++...|++..+..+-.++..|+.|.++|| |+|||| .++++.+..+++.+++... +
T Consensus 25 ~~f~~~~~gl---~~~~~g~i~~~~~i~dai~dp~~G~~sDr~~tr~Grrrp~~l~g~i~~~~~~~llf~~~p~~~~~~~ 101 (428)
T PF13347_consen 25 LYFYTDVLGL---SPALAGLILLVGRIWDAITDPLIGYLSDRTRTRWGRRRPWILIGAILLALSFFLLFSPPPAGLSFTA 101 (428)
T ss_pred HHHHHHHcCC---CHHHHHHHHHHHHHhhhhcCCcEEEEEeeecccccccceEeehhhHHHHHHHHHhhccccchhhhhh
Confidence 4556677799 99999999999999999999999999993 399765 5567888888888887765 4
Q ss_pred hHHHHHHHHHHHhhcccchhhhhheeeEeeec-CcchhhHHhHHHHHHHHHHHHHHHH-HHhc---c-C---CchHHHHH
Q 041759 168 NLWIYSLLRFFSGISRATIGTCTIVLLTEKVG-TEWRGLVGILDSFFFTIGTLTLPAI-AYTN---R-S---SSWTIIYL 238 (525)
Q Consensus 168 ~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~-~~~r~~~~~~~~~~~~~G~~l~~~l-~~~~---~-~---~~wr~~f~ 238 (525)
...++.+..++..++.........++..|+.+ +++|.+..+.-..+..+|.++...+ ..+. . . .+|++...
T Consensus 102 ~~~~~~~~~~l~~~~~t~~~i~~~al~~~lt~~~~~R~~l~~~~~~~~~~g~~l~~~~~~~l~~~~g~~~~~~~~~~~~~ 181 (428)
T PF13347_consen 102 KLVWLFVFYILFDIAYTFVQIPYNALIPELTPDPDERTRLSSWRMIFSMIGSLLASFLAPILVSWFGGGDTSNGYRWMAL 181 (428)
T ss_pred HHHHHHHHHHHHHHhhhhccCchhhcCccccccHhhhhhHHHHHHHHHHHHHHHHHHHhhhhhhhhccCccchHHHHHHH
Confidence 23456777788899999999999999999998 4789999999999888888755544 2222 1 1 27999999
Q ss_pred HHHHHHHHHHhHhheeecCCchHhhhcCCHHHHHHHHHhhCCCcCCccchhhhhhhccCCCCcccccccccchhhhhhhh
Q 041759 239 WTSIPTLVYSGLLYIFVSESPRWLFMQGRQEEAVEVIKSLSPIKDSNQLSLSLVSAVSFGHEPAASSKESSFLSSIRELF 318 (525)
Q Consensus 239 ~~~~~~~~~~~~~~~~lpesp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 318 (525)
+.+++.++..++..+.++|.++ +.++. +++.+..+.++.++
T Consensus 182 v~~iv~~v~~~i~~~~~ke~~~------~~~~~---------------------------------~~~~~~~~~~~~~~ 222 (428)
T PF13347_consen 182 VLAIVGLVFFLITFFFVKERSV------EVTEQ---------------------------------EKKISLRDSLRSLF 222 (428)
T ss_pred HHHHHHHHHhhhhhheeeeccc------ccccc---------------------------------ccccccccchhhhc
Confidence 9999999888777777777210 00000 00001114678889
Q ss_pred cchhHHHHHHHHHHHHHHHHHHHhhhhhcccc-cCChhHHHHHHHHHhcccccccCchhHHHHHHHHHhhcChhHHHHHH
Q 041759 319 VRRWALERTLALMVPGFGIGVVYYGMTLGIEN-LGFDIYLGVVFNALLEIPNLASTIPSFFLTFFLIQKWNRKSSLLVLF 397 (525)
Q Consensus 319 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~d~~g~~~~~~~~~ 397 (525)
+||.++...+..++.+..........+++.+. .+.+ ...........+ +.+++.++.+++.||+|+|+.+..+.
T Consensus 223 ~nr~~~~l~~~~~~~~~~~~~~~~~~~y~~~~vl~~~-~~~~~~~~~~~~----~~~v~~~~~~~l~~r~gk~~~~~~~~ 297 (428)
T PF13347_consen 223 RNRPFRILLLAFFLQWLAFALMNTFLPYYFTYVLGNE-GLISIFMLIFFV----ASIVGSPLWGRLSKRFGKKKVYIIGL 297 (428)
T ss_pred ccchHHHHHHHHHHHHhhhhhhhhHHHHHHHHHhcCc-hhhHHHHHHHHH----HHHHHHHHHHHHHHHccceeehhhhH
Confidence 99987777776666666555444444444444 3333 333444444444 66689999999999999999999999
Q ss_pred HHHHHHHHHHHHhccccccchhHHHHHHHHHHHHHHHHHHHHHhhhccccCc-------chhhhhhHHHHHHHHHHHHHH
Q 041759 398 IISGICSIMAVVANDISNAGKRMRIGLELASLFSAYIAYTVIFIYAIELFPT-------CVRNSATSIMRLAIIFAAIFS 470 (525)
Q Consensus 398 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~-------~~r~~~~~~~~~~~~~g~~~~ 470 (525)
.+.+++.+.+.+.... +....++..++.+++.+..+...+++.+|..+. +..|..+|+.+....++..++
T Consensus 298 ~~~~~~~~~~~~~~~~---~~~~~~i~~~l~gi~~~~~~~~~~a~~ad~id~~e~~tg~r~~g~~~s~~~~~~k~~~~la 374 (428)
T PF13347_consen 298 LLAALGFLLLFFLGPG---SPWLVLILFILAGIGYGAFFVIPWAMLADVIDYDEWKTGRRREGMYFSVNSFFIKIGQGLA 374 (428)
T ss_pred HHHHHHHHHHHHHHhh---hHHHHHHHHHHhHhhhcccccccccccccchhhHHHhcCCCchHHHHHhhhhhhHHHHHHH
Confidence 9999998888777622 245778888889999999999999999998863 345788888888888888877
Q ss_pred HHHHh
Q 041759 471 SVLVA 475 (525)
Q Consensus 471 p~i~~ 475 (525)
+.+.+
T Consensus 375 ~~i~g 379 (428)
T PF13347_consen 375 GAIVG 379 (428)
T ss_pred HHHHH
Confidence 77665
No 110
>COG2270 Permeases of the major facilitator superfamily [General function prediction only]
Probab=99.83 E-value=2e-18 Score=160.53 Aligned_cols=352 Identities=15% Similarity=0.049 Sum_probs=257.7
Q ss_pred hhhhhhhHHHHHHHHHHHhHHhhHhcccccCCchHH-HHHHHHHHHHHHHHHHhhhh---HHHHHHHHHHHhhcccchhh
Q 041759 113 SAFIKGLPAASHFTGCLLGIVFLATLADSSLGRKNL-LFLSCLTMSVATSLTIFSNN---LWIYSLLRFFSGISRATIGT 188 (525)
Q Consensus 113 s~~~~g~~~s~~~lg~~~~~~~~G~l~dr~~Grk~~-~~~~~~~~~i~~~~~~~~~~---~~~l~~~r~l~G~~~~~~~~ 188 (525)
+....|...++..+-.++.+++.|.++|+ .|+||. +-+...+..++.++..++++ ++..++...+..++......
T Consensus 56 ~~a~~gy~~aia~llia~LapiLG~iaD~-~g~Rk~~~~~f~~i~i~~~~~L~~i~~~s~~~~~l~~~il~~i~~~~s~V 134 (438)
T COG2270 56 STAYWGYASAIAGLLIALLAPILGTIADY-PGPRKKFFGFFTAIGIISTFLLWFIPPGSYLLLLLLFLILASIGFEFSNV 134 (438)
T ss_pred hhhHHHHHHHHHHHHHHHHHHHhhhhhcc-CCCcchHHHHHHHHHHHHHHHHHHhCCCchHHHHHHHHHHHHHhcchhhe
Confidence 66788899999999999999999999999 996554 55556666666777777654 45556667888999998899
Q ss_pred hhheeeEeeecCcchhhHHhHHHHHHHHHHHHHHHHH--Hhc-----------------cCCchHHHHHHHHHHHHHHHh
Q 041759 189 CTIVLLTEKVGTEWRGLVGILDSFFFTIGTLTLPAIA--YTN-----------------RSSSWTIIYLWTSIPTLVYSG 249 (525)
Q Consensus 189 ~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~l~~~l~--~~~-----------------~~~~wr~~f~~~~~~~~~~~~ 249 (525)
...+++.+..++++-++..++-.....+|..+.-++. .+. ....=|..+.+.++..++..+
T Consensus 135 fyds~L~~~~~k~~~~riS~lg~~~gylgs~i~li~~~~~~~~~~~~~~~~~l~~l~~~~~~~~ri~~~l~A~W~li~~i 214 (438)
T COG2270 135 FYDSMLPRLTTKDNMGRISGLGWALGYLGSVILLIFVVLGFALGQQTGITIILLGLPPADGEDVRITGLLAALWWLLFAL 214 (438)
T ss_pred ehhhHhhhhcCccccCcccccccccccccchHHHHHHHHHHhcccccceeEEeeccCccccccchhHHHHHHHHHHHHHh
Confidence 9999999999998888887766665566665544332 111 124578889999998888887
Q ss_pred HhheeecCCchHhhhcCCHHHHHHHHHhhCCCcCCccchhhhhhhccCCCCcccccccccchhhhhhhhcchhHHHHHHH
Q 041759 250 LLYIFVSESPRWLFMQGRQEEAVEVIKSLSPIKDSNQLSLSLVSAVSFGHEPAASSKESSFLSSIRELFVRRWALERTLA 329 (525)
Q Consensus 250 ~~~~~lpesp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~ 329 (525)
..++.++|.++-. ........+..+++ +.+++++.+++++...++.
T Consensus 215 Pm~~~v~~~~~~~--~~~~~~l~~g~k~L--------------------------------~~t~k~i~~~~~i~~FLiA 260 (438)
T COG2270 215 PMILNVHDAEKIS--SPPPTALRNGFKEL--------------------------------KSTFKEIRGRKNLVLFLIA 260 (438)
T ss_pred HHHhccccccccc--ccchHHHHHHHHHH--------------------------------HHHHHHHhcccchHHHHHH
Confidence 8888888765310 01111112222222 1477888888887777776
Q ss_pred HHHHHHHHHHHHhhhhhc-ccccCChhHHHHHHHHHhcccccccCchhHHHHHHHHHhhcChhHHHHHHHHHHHHHHHHH
Q 041759 330 LMVPGFGIGVVYYGMTLG-IENLGFDIYLGVVFNALLEIPNLASTIPSFFLTFFLIQKWNRKSSLLVLFIISGICSIMAV 408 (525)
Q Consensus 330 ~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~d~~g~~~~~~~~~~~~~~~~~~~~ 408 (525)
.++..-+.+.....-..+ ...+|.+..+...+....++ .+++|.++.|++.||+|.|+++.++.++..+..+...
T Consensus 261 ~~~~~DGv~til~~~~~fg~~~~gls~~~lll~g~~~~v----vA~lg~ii~g~Ld~rfg~k~vl~~~lvi~~~~~~~~~ 336 (438)
T COG2270 261 RFFYIDGVNTILAMGGVFGAADLGLSSTELLLIGIALSV----VAALGAIIAGFLDERFGSKPVLMIGLVILSIAALYLI 336 (438)
T ss_pred HHHHHhhHHHHHHHHHHHHHHHcCccHHHHHHHHHHHHH----HHHHHHHHHHHHHHHhCCceeehHHHHHHHHHHHHHH
Confidence 666655554443333333 44788887776666666666 6669999999999999999999999888887777766
Q ss_pred HhccccccchhHHHHHHHHHHHHHHHHHHHHHhhhccccCcchhhhhhHHHHHHHHHHHHHHHHHHhh---ccCchhHHH
Q 041759 409 VANDISNAGKRMRIGLELASLFSAYIAYTVIFIYAIELFPTCVRNSATSIMRLAIIFAAIFSSVLVAA---GSNNEFVSY 485 (525)
Q Consensus 409 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~r~~~~~~~~~~~~~g~~~~p~i~~~---~~~~~~~~~ 485 (525)
+.... ....++.++.+...+..++..-++..++.|+++.++.+|+++..+..+++++|++.+. ..+.....+
T Consensus 337 ~~~~~-----~~f~i~gll~g~s~G~~qA~SRSy~~~lvp~~k~~~fFglyaltgra~S~~gp~lv~v~t~iTg~~r~g~ 411 (438)
T COG2270 337 FLEGE-----LDFWILGLLVGTSLGGAQASSRSYLARLVPKGKEGRFFGLYALTGRAASFLGPFLVAVITQITGSSRAGV 411 (438)
T ss_pred Hcccc-----HHHHHHHHHHHHhcchHHHHHHHHHHHhCCCccccceeehhhhhhhHHHHHHHHHHHHHHHHhcchhhHH
Confidence 65544 3566777888899999999999999999999999999999999999999999999984 223345556
Q ss_pred HHHHHHHHHHHHHHHhccCCCCC
Q 041759 486 GVFGLVIICCGFFVICLPETRGS 508 (525)
Q Consensus 486 ~~~~~~~~~~~~~~~~~~~~~~~ 508 (525)
..+.++..++.++.+.+|+.+++
T Consensus 412 ~~i~vll~iGl~~L~~v~~~~~~ 434 (438)
T COG2270 412 LSIIVLLLIGLLLLLRVKVPGRR 434 (438)
T ss_pred HHHHHHHHhhHhhEEeecCCCCc
Confidence 66666666777777777665443
No 111
>PRK15462 dipeptide/tripeptide permease D; Provisional
Probab=99.82 E-value=3.2e-17 Score=162.04 Aligned_cols=349 Identities=10% Similarity=-0.004 Sum_probs=206.4
Q ss_pred ceeeccccccchhhhhhhHHHHHHHHHHHhHHhhHhcccccC-CchHHHHHHHHHHHHHHHHHHhhh-hHHHHHHHHHHH
Q 041759 102 TIISEWGLECSSAFIKGLPAASHFTGCLLGIVFLATLADSSL-GRKNLLFLSCLTMSVATSLTIFSN-NLWIYSLLRFFS 179 (525)
Q Consensus 102 ~i~~~~~~~~~s~~~~g~~~s~~~lg~~~~~~~~G~l~dr~~-Grk~~~~~~~~~~~i~~~~~~~~~-~~~~l~~~r~l~ 179 (525)
.+.+++|+ ++.+.+.+.+.+.....++.+++|+++|| + ||||+++++.++.+++.++.+..+ +...+.++..+.
T Consensus 35 yL~~~lgl---s~~~a~~i~~~~~~~~~l~~ligG~LaDR-ilGrrr~iliG~il~~lg~lll~~~~~~~~~~~l~l~li 110 (493)
T PRK15462 35 YLTNQLKY---DDNHAYELFSAYCSLVYVTPILGGFLADK-VLGNRMAVMLGALLMAIGHVVLGASEIHPSFLYLSLAII 110 (493)
T ss_pred HHHHhcCC---CHHHHHHHHHHHHHHHHHHHHHHHHHHHH-ccCcHHHHHHHHHHHHHHHHHHHHhhcchhHHHHHHHHH
Confidence 34566899 99999999999999999999999999999 9 999999999999999988776543 223344444455
Q ss_pred hhcccchhhhhheeeEeeecCc--chhhHHhHHHHHHHHHHHHHHHH-HHhccCCchHHHHHHHHHHHHHHHhHhheeec
Q 041759 180 GISRATIGTCTIVLLTEKVGTE--WRGLVGILDSFFFTIGTLTLPAI-AYTNRSSSWTIIYLWTSIPTLVYSGLLYIFVS 256 (525)
Q Consensus 180 G~~~~~~~~~~~~~i~~~~~~~--~r~~~~~~~~~~~~~G~~l~~~l-~~~~~~~~wr~~f~~~~~~~~~~~~~~~~~lp 256 (525)
++|.|...+...++++|.+|++ +|...+++...+.++|..++|.+ +++....|||+.|.+.++..++.. +.+....
T Consensus 111 ~iG~G~~~~~~~alv~elfp~~~~~R~sgf~i~Y~~~nlG~~iap~l~g~L~~~~Gw~~~F~iaaigm~l~l-i~~~~~~ 189 (493)
T PRK15462 111 VCGYGLFKSNVSCLLGELYEPTDPRRDGGFSLMYAAGNVGSIIAPIACGYAQEEYSWAMGFGLAAVGMIAGL-VIFLCGN 189 (493)
T ss_pred HHhcccccccHHHHHHHHCCCCCccccceehHHHHHHHHHHHHHHHHHHHHHhhhChHHHHHHHHHHHHHHH-HHHHHhh
Confidence 5666666677778899999875 78999999999999999999998 566667899999998766444433 2222211
Q ss_pred CCc-hHhh-hcCCHHHHHHHH---------H----hhCCCcCCccchhhhhh---------h--ccCCCCcccccccccc
Q 041759 257 ESP-RWLF-MQGRQEEAVEVI---------K----SLSPIKDSNQLSLSLVS---------A--VSFGHEPAASSKESSF 310 (525)
Q Consensus 257 esp-~~~~-~~~~~~~~~~~~---------~----~~~~~~~~~~~~~~~~~---------~--~~~~~~~~~~~~~~~~ 310 (525)
+.. +... .+++.++.+... . -.....-..+......- . ....+ .+++
T Consensus 190 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~------ 262 (493)
T PRK15462 190 RHFTHTRGVNKKVLRATNFLLPNWGWLLVLLVATPALITVLFWKEWSVYALIVATIIGLGVLAKIYRKA-ENQK------ 262 (493)
T ss_pred hhhccCCCCCCCCchhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc-CCHH------
Confidence 110 0000 000000000000 0 00000000000000000 0 00000 0000
Q ss_pred hhhhhhhhcchh--HHHHHHHHHHHHHHHHHHHhhhhhcccc------cC--ChhHHHHHHHHHhcccccccCchhHHHH
Q 041759 311 LSSIRELFVRRW--ALERTLALMVPGFGIGVVYYGMTLGIEN------LG--FDIYLGVVFNALLEIPNLASTIPSFFLT 380 (525)
Q Consensus 311 ~~~~~~l~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 380 (525)
-|+|- +....+...+.|.........+.++.++ .| .++.+...++.+..+ +.+++.
T Consensus 263 -------er~r~~~~~~l~~~~~~Fw~~~~Q~~~sl~lfa~~~vd~~~~g~~ip~~~~qslNp~~ii-------~l~P~~ 328 (493)
T PRK15462 263 -------QRKELGLIVTLTFFSMLFWAFAQQGGSSISLYIDRFVNRDMFGYTVPTAMFQSINAFAVM-------LCGVFL 328 (493)
T ss_pred -------HHhhHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHhccchhcceeeCHHHHHhHhHHHHH-------HHHHHH
Confidence 00000 0111111122222222222333333322 12 334444445555444 666666
Q ss_pred HHHHHhhcC--hh-----HHHHHHHHHHHHHHHHHHhccc----cccchhHHHHHHHHHHHHHHHHHHHHHhhhccccCc
Q 041759 381 FFLIQKWNR--KS-----SLLVLFIISGICSIMAVVANDI----SNAGKRMRIGLELASLFSAYIAYTVIFIYAIELFPT 449 (525)
Q Consensus 381 ~~l~d~~g~--~~-----~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~ 449 (525)
.++-.|..| |. -+.+++++.+++++++.+.... ...+..+.+...++...+.....|+..++++++.|+
T Consensus 329 a~lw~~l~~~~~~~s~~~Kfa~g~~~~g~~f~~l~~~~~~~~~~~~~s~~wl~~~~~~~t~gEl~~sPvgls~~~~laP~ 408 (493)
T PRK15462 329 AWVVKESVAGNRTVRIWGKFALGLGLMSAGFCILTLSARWSAMYGHSSLPLMVLGLAVMGFAELFIDPVAMSQITRIEIP 408 (493)
T ss_pred HHHHHHHhcCCCCCCcHHHHHHHHHHHHHHHHHHHHHHhhcCCCCCcCHHHHHHHHHHHHHHHHHHChHHHHHHHHhChH
Confidence 666555522 21 2667888888887766543211 112344677788888899999999999999999999
Q ss_pred chhhhhhHHHHHHH-HHHHHHHHHHHhh
Q 041759 450 CVRNSATSIMRLAI-IFAAIFSSVLVAA 476 (525)
Q Consensus 450 ~~r~~~~~~~~~~~-~~g~~~~p~i~~~ 476 (525)
+.++..+|...... .+|..++..+.+.
T Consensus 409 ~~~g~~mg~w~l~~~~~~~~~~g~~~~~ 436 (493)
T PRK15462 409 GVTGVLTGIYMLLSGAIANYLAGVIADQ 436 (493)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999987644 6777777666653
No 112
>PF01306 LacY_symp: LacY proton/sugar symporter; InterPro: IPR022814 In bacteria there are a number of families of transport proteins, including symporters and antiporters, that mediate the intake of a variety of sugars with the concomitant uptake of hydrogen ions (proton symporters) []. The lacY family of Escherichia coli and Klebsiella pneumoniae are proton/beta-galactoside symporters, which, like most sugar transporters, are integral membrane proteins with 12 predicted transmembrane (TM) regions. Also similar to the lacY family are the rafinose (rafB) and sucrose (cscB) permeases from E. coli []. This entry also includes bacterial phenylproprionate permease.; PDB: 1PV7_B 1PV6_A 2Y5Y_B 2CFQ_A 2V8N_B 2CFP_A.
Probab=99.82 E-value=2.6e-18 Score=163.70 Aligned_cols=356 Identities=15% Similarity=0.103 Sum_probs=220.1
Q ss_pred ceeeccccccchhhhhhhHHHHHHHHHHHhHHhhHhcccccCCchHHHHHHHHH--HHHHHHHH-Hhh----hhHH-HHH
Q 041759 102 TIISEWGLECSSAFIKGLPAASHFTGCLLGIVFLATLADSSLGRKNLLFLSCLT--MSVATSLT-IFS----NNLW-IYS 173 (525)
Q Consensus 102 ~i~~~~~~~~~s~~~~g~~~s~~~lg~~~~~~~~G~l~dr~~Grk~~~~~~~~~--~~i~~~~~-~~~----~~~~-~l~ 173 (525)
-+.+.-|+ +..++|.+.++..+...+.+++.|.++|| +|.||-++..+.+ ...+.+.. .+. .|++ ..+
T Consensus 33 WL~~~~GL---s~~~iG~i~s~~~~~~l~~qp~~G~i~Dk-lg~kK~Ll~~i~~l~~l~~pff~~v~~pll~~n~~lg~i 108 (412)
T PF01306_consen 33 WLTQVAGL---SGTEIGIIFSAGSLFALLAQPVYGFISDK-LGLKKHLLWFIAILLLLFGPFFIYVFGPLLQSNFWLGAI 108 (412)
T ss_dssp HHHHHH------HHHHHHHHHHHHHHHHHTHHHHHHHHHH-CTTCSHHHHHHHHHHHTCHHHHHHTHHHHHHTT-HHHHH
T ss_pred HHccccCC---CHHHHHHHHHHHHHHHHHHHHhHHHhcch-hhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 33445899 99999999999999999999999999999 9966654433322 22222222 222 2332 333
Q ss_pred HHHHHHhhcccchhhhhheeeEeeecCcchhhHHhHHHHHHHHHHHHHHHHHHhccCCchHHHHHHHHHHHHHHHhHhhe
Q 041759 174 LLRFFSGISRATIGTCTIVLLTEKVGTEWRGLVGILDSFFFTIGTLTLPAIAYTNRSSSWTIIYLWTSIPTLVYSGLLYI 253 (525)
Q Consensus 174 ~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~l~~~l~~~~~~~~wr~~f~~~~~~~~~~~~~~~~ 253 (525)
++-+..|+......|+..+++.++. ++.+.=.|-..++.++|.+++..++..+-+.+-+..|++....+++..++..+
T Consensus 109 ig~i~l~~~f~~~~~~~Ea~~er~s--r~~~feYG~~R~wGSig~ai~s~~~G~L~~i~p~~~fwi~s~~~~il~lll~~ 186 (412)
T PF01306_consen 109 IGGIYLGLVFNAGVPLSEAYAERVS--RRNGFEYGRARMWGSIGFAIASLLAGILFNINPNIIFWIASAAAIILLLLLLL 186 (412)
T ss_dssp HTTTTTTTTTTTHHHHHHHHHHHHH--HHHSS-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHS
T ss_pred HHHHHHHHHHcccchHHHHHHHHHH--HHhcCCcchHHHHhhHHHHHHHHHhheeeeeCccHHHHHHHHHHHHHHHHHHH
Confidence 3444455555555666666555443 33344466677788888888887754443456778888877776666644444
Q ss_pred eecCCchHhhhcCCHHHHHHHHHhhCCCcCCccchhhhhhhccCCCCcccccccccchhhhhhhhcchhHHHHHHHHHHH
Q 041759 254 FVSESPRWLFMQGRQEEAVEVIKSLSPIKDSNQLSLSLVSAVSFGHEPAASSKESSFLSSIRELFVRRWALERTLALMVP 333 (525)
Q Consensus 254 ~lpesp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~ 333 (525)
.-|+.++.....+. . + .++++...+...+++|+|++|...+.....
T Consensus 187 ~~~~~~~~~~~~~~-----------------~----------------~-~~~~~~~~~~~~~l~k~~~fw~~~l~v~g~ 232 (412)
T PF01306_consen 187 LKPDVPPQAEVADA-----------------L----------------G-AKKDKVSLKDVLSLFKMRNFWFFVLFVIGV 232 (412)
T ss_dssp S---SSSSS-SSTT-----------------S----------------S-S------HHHHHHHTTSHHHHHHHHHHHHH
T ss_pred cCCcCchhhhhhcc-----------------c----------------c-cCCCCCcHHHHHHHhcchhHHHHHHHHHHH
Confidence 44443210000000 0 0 000000013567899999988766665555
Q ss_pred HHHHHHHHhhhhhcc----cccCChhHHHHHHHHHhcccccccCchhHHHHHHHHHhhcChhHHHHHHHHHHHHHHHHHH
Q 041759 334 GFGIGVVYYGMTLGI----ENLGFDIYLGVVFNALLEIPNLASTIPSFFLTFFLIQKWNRKSSLLVLFIISGICSIMAVV 409 (525)
Q Consensus 334 ~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~d~~g~~~~~~~~~~~~~~~~~~~~~ 409 (525)
...........+.+. ++.+.+....+.+.++..+ .-++...+.+++.+|+|.|+.++++..++.+-.....+
T Consensus 233 ~~~Y~vfdqqf~~y~~~~f~~~~~g~~~~G~l~s~~v~----~E~~~m~~~p~li~rig~k~~Lllag~i~~iRi~~~~~ 308 (412)
T PF01306_consen 233 AAIYDVFDQQFPIYFASFFQSAGQGNQMYGYLWSVQVF----LEALMMFFSPWLINRIGAKNLLLLAGVIMAIRIIGSGF 308 (412)
T ss_dssp HHHHHHHHHHHHHHHHHTSSSHHHHHHHHHHHHHHHHH----HHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHHHHhcccccChhHHhHHHHHHHH----HHHHHHHHHHHHHHhcChHhHHHHHHHHHHHHHHHHhh
Confidence 444443332233333 3333444445555554444 56688899999999999999999999999999888888
Q ss_pred hccccccchhHHHHHHHHHHHHHHHHHHHHHhhhccccCcchhhhhhHHH-HHHHHHHHHHHHHHHhh--ccCchhHHHH
Q 041759 410 ANDISNAGKRMRIGLELASLFSAYIAYTVIFIYAIELFPTCVRNSATSIM-RLAIIFAAIFSSVLVAA--GSNNEFVSYG 486 (525)
Q Consensus 410 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~r~~~~~~~-~~~~~~g~~~~p~i~~~--~~~~~~~~~~ 486 (525)
.++. +.....-.+-++-.........-|+.+.+|++..++...+. +....+|..+.+.+.|. +..+....|+
T Consensus 309 ~~~~-----~~i~~~klLH~~e~~l~lva~fkYI~~~fd~rlsAt~y~v~~~~~~~~~~~i~s~~~G~lyd~~G~~~tyl 383 (412)
T PF01306_consen 309 ATNP-----WVISLIKLLHALEFPLLLVAAFKYITAHFDKRLSATLYLVGFQFAKQIGIIILSPLAGYLYDRIGFQHTYL 383 (412)
T ss_dssp --SH-----HHHHHHHHHHHHHHHHHHHHHHHHHHHHS-GGGHHHHHHHHHTTTHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred hcch-----HHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHhHHHHHHHHHHHHHHHHHHHHHhhhHHhhHhhcCcHHHHH
Confidence 7665 46777778888888888888899999999999988888876 45568888888888884 4445566787
Q ss_pred HHHHHHHHHHHHH-HhccCCC
Q 041759 487 VFGLVIICCGFFV-ICLPETR 506 (525)
Q Consensus 487 ~~~~~~~~~~~~~-~~~~~~~ 506 (525)
+.+.+.+...++. +.+++.+
T Consensus 384 img~iv~~~~li~~f~l~~~~ 404 (412)
T PF01306_consen 384 IMGLIVLPFTLISAFTLKKDK 404 (412)
T ss_dssp HHHHHHHHHHHHHHHHS--SS
T ss_pred HHHHHHHHHHHHheeeecCCC
Confidence 7777766555544 4454433
No 113
>TIGR01272 gluP glucose/galactose transporter. Disruption of the loci leads to the total loss of glucose or galactose uptake in E.coli. Putative transporters in other bacterial species were isolated by functional complementation, which restored it functional activity.
Probab=99.78 E-value=3.5e-17 Score=154.86 Aligned_cols=271 Identities=12% Similarity=0.033 Sum_probs=183.9
Q ss_pred HhhhhHHHHHHHHHHHhhcccchhhhhheeeEeeecCcchhhHHhHHHHHHHHHHHHHHHHHH-hccC------------
Q 041759 164 IFSNNLWIYSLLRFFSGISRATIGTCTIVLLTEKVGTEWRGLVGILDSFFFTIGTLTLPAIAY-TNRS------------ 230 (525)
Q Consensus 164 ~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~l~~~l~~-~~~~------------ 230 (525)
+...+|+.++++-++.|.|.+...+....++++..+++++++.+++.+.++++|..++|+++. ++..
T Consensus 5 ~~~~~~~~~l~~~f~~g~G~~~lq~~~n~~v~~~~~~~~~~~~l~~~~~~~~~G~~~gP~i~~~~i~~~~~~~~~~~~~~ 84 (310)
T TIGR01272 5 ASQRYYVLFLGALFVLASGLTILQVAANPYVSILGPIETAASRLALTQAFNKLGTTVAPLFGGSLILSGAGDLSMQVATA 84 (310)
T ss_pred HHhhHHHHHHHHHHHHHhhHHHHHhhHHHHHHHHCCcchHHHHHHHHHHHhhhHHHHHHHHHHHHHhcCCcchhhhhhhh
Confidence 345789999999999999999999999999999999999999999999999999999999943 3311
Q ss_pred ----CchHHHHHHHHHHHHHHHhH-hheeecCCchHhhhcCCHHHHHHHHHhhCCCcCCccchhhhhhhccCCCCccccc
Q 041759 231 ----SSWTIIYLWTSIPTLVYSGL-LYIFVSESPRWLFMQGRQEEAVEVIKSLSPIKDSNQLSLSLVSAVSFGHEPAASS 305 (525)
Q Consensus 231 ----~~wr~~f~~~~~~~~~~~~~-~~~~lpesp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 305 (525)
.+|+++|++.+.+.++..++ .+.-+||.+. ++++ + .+ ++ + .
T Consensus 85 ~~~~~~~~~~yl~ia~~~~~~~i~~~~~~~p~~~~------~~~~--~--------~~---------------~~-~--~ 130 (310)
T TIGR01272 85 NAEAAKVHTPYLLLAGALAVLAIIFAFLPLPELQE------ADVA--R--------VS---------------SG-D--T 130 (310)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHccCCCCCc------cccc--c--------cc---------------cc-c--c
Confidence 37999999776665555422 2223344210 0000 0 00 00 0 0
Q ss_pred ccccchhhhhhhhcchhHHHHHHHHHHHHHHHHHHHhhhhhccc---ccCChhHHHHHHHHHhcccccccCchhHHHHHH
Q 041759 306 KESSFLSSIRELFVRRWALERTLALMVPGFGIGVVYYGMTLGIE---NLGFDIYLGVVFNALLEIPNLASTIPSFFLTFF 382 (525)
Q Consensus 306 ~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 382 (525)
...++++++|..+...+..++............+.++. .+|.+....+...+.... +.++|+++.++
T Consensus 131 ------~~~~~~~~~~~~~l~~~~~f~yvg~e~~~~~w~~~yl~~~~~~g~s~~~a~~~~s~~~~----~~~iGr~~~~~ 200 (310)
T TIGR01272 131 ------TQKTSAFQFTHLVLGALGIFVYVGAEVSAGSFLVNFLSDPHALGLPEDQAAHFTAYTWG----GAMVGRFIGSA 200 (310)
T ss_pred ------cchhhHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccCCCCHHHHHHHHHHHHH----HHHHHHHHHHH
Confidence 01123455665554433333333233233333344443 258888888888877777 88899999999
Q ss_pred HHHhhcChhHHHHHHHHHHHHHHHHHHhccccccchhHHHHHHHHHHHHHHHHHHHHHhhhccccCcchhhhhhHHHHHH
Q 041759 383 LIQKWNRKSSLLVLFIISGICSIMAVVANDISNAGKRMRIGLELASLFSAYIAYTVIFIYAIELFPTCVRNSATSIMRLA 462 (525)
Q Consensus 383 l~d~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~r~~~~~~~~~~ 462 (525)
+.||+++|+.+.++..+..++.++....... ......++.+++.+..+|...+...+..|++ .+++.++. ..
T Consensus 201 l~~r~g~~~~l~~~~~l~~~~~~l~~~~~~~------~~~~~~~l~g~~~s~i~P~~~s~a~~~~~~~-~~~asai~-~~ 272 (310)
T TIGR01272 201 VMPMISQGRYLAFNAFLAVLLSIGAALTHGY------VAMWFVLALGLFNSIMFPTIFSLALNALGRH-TSQGSGIL-CL 272 (310)
T ss_pred HHHHhCHHHHHHHHHHHHHHHHHHHHHcCCH------HHHHHHHHHHHHHHHHHHHHHHHHHhhhhhh-hhhhHHHH-HH
Confidence 9999999998888877777766544443222 2233555778999999999999999988865 35666664 56
Q ss_pred HHHHHHHHHHHHhh--ccCchhHHHH
Q 041759 463 IIFAAIFSSVLVAA--GSNNEFVSYG 486 (525)
Q Consensus 463 ~~~g~~~~p~i~~~--~~~~~~~~~~ 486 (525)
..+|+.+.|.+.|. +..+....++
T Consensus 273 ~~~Gg~i~P~l~G~lad~~g~~~a~~ 298 (310)
T TIGR01272 273 AIVGGAIVPLLQGSLADCLGIQLAFA 298 (310)
T ss_pred HHhcchHHHHHHHHHHHhccchHHHH
Confidence 78999999998885 3234445544
No 114
>KOG2563 consensus Permease of the major facilitator superfamily [General function prediction only]
Probab=99.76 E-value=6.4e-17 Score=151.28 Aligned_cols=323 Identities=11% Similarity=0.068 Sum_probs=210.5
Q ss_pred hhhhhhhHHHHHHHHHHHhHHhhHhcccccCCchHHHHHHHHHHHHHHHHHHhh------hhHH--HHHHHHHHHhhccc
Q 041759 113 SAFIKGLPAASHFTGCLLGIVFLATLADSSLGRKNLLFLSCLTMSVATSLTIFS------NNLW--IYSLLRFFSGISRA 184 (525)
Q Consensus 113 s~~~~g~~~s~~~lg~~~~~~~~G~l~dr~~Grk~~~~~~~~~~~i~~~~~~~~------~~~~--~l~~~r~l~G~~~~ 184 (525)
+....-|+.-+|++.+....+++-|+.|+ +|-|...+++..+..+|..+-..+ +.++ ....+..+.+.+.-
T Consensus 77 s~~~~~wlsmIym~v~vp~gf~~mw~ldk-~GLR~a~llgt~ln~iGa~Ir~iss~p~v~~~f~~~l~~~Gq~iaa~Aq~ 155 (480)
T KOG2563|consen 77 SSSAADWLSMIYMVVSVPFGFAAMWILDK-FGLRTALLLGTVLNGIGAWIRLISSLPFVPPLFRRPLTHTGQSIAAAAQP 155 (480)
T ss_pred chHHHHHHHHHHHHHHHHHhhHHHHhhcc-cchHHHHHHHHHHHHHHHHHhhhccCccccccchhhhhHHhHHHHHHhhh
Confidence 55667799999999999999999999999 999999999999999999987665 2345 67788888888877
Q ss_pred chhhhhheeeEeeecCcchhhHHhHHHHHHHHHHHHHHHHHHhcc-------CCchHH--HHHHHHHHHHHHHhHhheee
Q 041759 185 TIGTCTIVLLTEKVGTEWRGLVGILDSFFFTIGTLTLPAIAYTNR-------SSSWTI--IYLWTSIPTLVYSGLLYIFV 255 (525)
Q Consensus 185 ~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~l~~~l~~~~~-------~~~wr~--~f~~~~~~~~~~~~~~~~~l 255 (525)
.....-..+..-|+++++|..+..+-.++..+|.+++.++.-++- +..|.. .|+...++..+.+++..+..
T Consensus 156 Fim~lPskiA~~WF~~~qra~A~~~~v~~n~LGvavg~llppilV~~~~~~~~~~~~~~~~f~~~~~l~~l~l~l~~~~~ 235 (480)
T KOG2563|consen 156 FILGLPSKIAAVWFPPDQRAIATVLGVMGNPLGVAVGFLLPPILVPSSKDSEDNSWLFFTLFLGVECLAALLLALVLFVF 235 (480)
T ss_pred HhhccccHHHHhhCCcchhhhhhhHHHhcchHHHHHHhhccceecCCCCCcchhHHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 666665666778999999999999999999999998888855432 334655 45555555544443444444
Q ss_pred cCCchHhhhcCCHHHHHHHHHhhCCCcCCccchhhhhhhccCCCCcccccccccchhhhhhhhcchhHHHHHHHHHHHHH
Q 041759 256 SESPRWLFMQGRQEEAVEVIKSLSPIKDSNQLSLSLVSAVSFGHEPAASSKESSFLSSIRELFVRRWALERTLALMVPGF 335 (525)
Q Consensus 256 pesp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~ 335 (525)
++.|+.. ....+... . + .+...+.+++++++++...++...+...
T Consensus 236 ~~~P~tP---ps~s~~~~--------~-~-----------------------~~f~~si~~~~~n~~F~il~~~ygi~~g 280 (480)
T KOG2563|consen 236 TKKPPTP---PSASQAAL--------Q-D-----------------------ASFPKSIKSCFKNRQFIILAICYGIGLG 280 (480)
T ss_pred CCCCCCC---CchhHhhh--------h-c-----------------------CcHHHHHHHHHcCccHHHHHHHHhhhHH
Confidence 4433210 00000000 0 0 0012578889999875443333332222
Q ss_pred HHHHHHhhhhhcccccCChhHHHHHHHHHhcccccccCchhHHHHHHHHHhhcChh-HHHHHHHHHHHHHHHHHHhcccc
Q 041759 336 GIGVVYYGMTLGIENLGFDIYLGVVFNALLEIPNLASTIPSFFLTFFLIQKWNRKS-SLLVLFIISGICSIMAVVANDIS 414 (525)
Q Consensus 336 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~d~~g~~~-~~~~~~~~~~~~~~~~~~~~~~~ 414 (525)
.....+..+...+...|++...++....+..+ ++++++.++|.+.||.+.-+ ...+......++.+.+......
T Consensus 281 ~F~~l~~~l~~~l~~sgY~~~~aG~ig~l~iv----~Gmlga~~~gii~Dktk~fk~~~~v~~~~~~v~~~~l~~~t~~- 355 (480)
T KOG2563|consen 281 LFNSLSTLLNLALCPSGYEGVFAGYIGALMIV----AGMLGALASGIIADKTKKFKLTTLVLYLFALVGTLMLLTCTLF- 355 (480)
T ss_pred HHHHHHHHhhhccccccCCccccchhHHHHHH----HHHHHHHHHHhhhhhhhhHHHHHHHHHHHHHHHHHHHHHhhcc-
Confidence 22223333332233334444445555555555 66699999999999987644 3444444444442222222222
Q ss_pred ccchhHHHHHHHHHHHHHHHHHHHHHhhhccccCcchhhhhhHHHHHHHHHHHHHHHHHHhh
Q 041759 415 NAGKRMRIGLELASLFSAYIAYTVIFIYAIELFPTCVRNSATSIMRLAIIFAAIFSSVLVAA 476 (525)
Q Consensus 415 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~r~~~~~~~~~~~~~g~~~~p~i~~~ 476 (525)
..+.+..+....+.+++.....|+..-+..|..-+..-++..|+.+..+.+-+++-.++.+.
T Consensus 356 ~~~~viv~~t~~~~g~~~~~~~Pig~ElgvE~TyPv~E~tSsGll~~~gq~f~~~~~~~~~~ 417 (480)
T KOG2563|consen 356 LGDSVIVFTTCGLLGFFGTGYLPIGFELGVETTYPVAEGTSSGLLNLSGQIFGVILVFIMGI 417 (480)
T ss_pred CCceEehhhhHHHHHHhhcCCCCcceeeeeeeccccCCcccceeEEeehhHHHHHHHHHHHH
Confidence 12233566666777777788888888888888656666888999998888877777777763
No 115
>PF03209 PUCC: PUCC protein; InterPro: IPR004896 This protein is required for high-level transcription of the PUC operon. It is an integral membrane protein. The family includes other proteins form Rhodobacter eg. bacteriochlorophyll synthase.
Probab=99.71 E-value=5.4e-14 Score=131.76 Aligned_cols=326 Identities=14% Similarity=0.139 Sum_probs=229.0
Q ss_pred ceeeccccccchhhhhhhHHHHHHHHHHHhHHhhHhcccccCC-----chHH-HHHHHHHHHHHHHHHHhh-----h---
Q 041759 102 TIISEWGLECSSAFIKGLPAASHFTGCLLGIVFLATLADSSLG-----RKNL-LFLSCLTMSVATSLTIFS-----N--- 167 (525)
Q Consensus 102 ~i~~~~~~~~~s~~~~g~~~s~~~lg~~~~~~~~G~l~dr~~G-----rk~~-~~~~~~~~~i~~~~~~~~-----~--- 167 (525)
.+..|+++ .....+.+.+...+... ..+.+|+.+|+ .+ ||.. +..|.++...+..+..++ .
T Consensus 5 VMIvEL~v---pA~lv~~lval~~~~ap-~R~~~G~~SD~-~~s~~G~rRtPyI~~G~~~~~~g~~~ap~a~~~l~~~~~ 79 (403)
T PF03209_consen 5 VMIVELGV---PAWLVALLVALHYLVAP-LRVWFGHRSDT-HPSILGWRRTPYIWGGTLLQAGGLAIAPFALLLLAESGQ 79 (403)
T ss_pred hHHHHhcc---HHHHHHHHHHHHHHHHH-HHHHhcccccc-CcccCcCCchhhhHHHHHHHHHHHHHHHHHHHHHccccc
Confidence 46678999 89999999999888765 58889999999 77 6654 455777776666655543 2
Q ss_pred ----hH--H--HHHHHHHHHhhcccchhhhhheeeEeeecCcchhhHHhHHHHHHHHHHHHHHHH-HHhccCCchHHHHH
Q 041759 168 ----NL--W--IYSLLRFFSGISRATIGTCTIVLLTEKVGTEWRGLVGILDSFFFTIGTLTLPAI-AYTNRSSSWTIIYL 238 (525)
Q Consensus 168 ----~~--~--~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~l~~~l-~~~~~~~~wr~~f~ 238 (525)
+. + ...+.-.+.|+|.+...+...++++|..|+++|+++.++.....-+|.+++..+ +.++++++-.-..-
T Consensus 80 ~~~~~~~~g~~~a~l~F~l~G~G~~~s~T~~lALl~D~~~e~~R~~~v~ivw~Mli~G~iv~ai~~g~lL~~~s~~rL~~ 159 (403)
T PF03209_consen 80 QSSGPFWLGLALAALAFLLYGLGVHASGTSFLALLADLAPEERRPRVVAIVWVMLIVGIIVSAIVFGRLLDPFSPERLIQ 159 (403)
T ss_pred ccccccHHHHHHHHHHHHHHHhhHhHhHHHHHHHHHhcCCHhhhhhhHHHHHHHHHHHHHHHHHHHHHHccccCHHHHHH
Confidence 12 2 344556788999999999999999999999999999999999999999999887 77887665433332
Q ss_pred HH---HHHHHHHHhHhheeecCCchHhhhcCCHHHHHHHHHhhCCCcCCccchhhhhhhccCCCCcccccccccchhhhh
Q 041759 239 WT---SIPTLVYSGLLYIFVSESPRWLFMQGRQEEAVEVIKSLSPIKDSNQLSLSLVSAVSFGHEPAASSKESSFLSSIR 315 (525)
Q Consensus 239 ~~---~~~~~~~~~~~~~~lpesp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 315 (525)
+. ++..++.. +...+=.|.+. .+. . ..+++++.+....++
T Consensus 160 v~~~~a~i~~~l~-~ia~wg~E~r~-------~~~-----------~------------------~~~~~~~~~f~~a~~ 202 (403)
T PF03209_consen 160 VIQGVALIALLLN-LIALWGQEPRR-------SRR-----------A------------------AAAERPRPPFREAWR 202 (403)
T ss_pred HHHHHHHHHHHHH-HHHHHhcccCC-------ccc-----------c------------------cCCCCCCccHHHHHH
Confidence 22 22222222 11111122110 000 0 000001111124677
Q ss_pred hhhcchhHHHHHHHHHHHHHHHHHHHhhh-hhcccccCChhHHHHHHHHHhcccccccCchhHHHHHHHHH-hhcChhHH
Q 041759 316 ELFVRRWALERTLALMVPGFGIGVVYYGM-TLGIENLGFDIYLGVVFNALLEIPNLASTIPSFFLTFFLIQ-KWNRKSSL 393 (525)
Q Consensus 316 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~d-~~g~~~~~ 393 (525)
++..+|+.++.+...++..+..++..-.+ ||--+.+|++..++.-+++.... +.++|..+.+++.. |.++++..
T Consensus 203 ~~~~~~~a~~f~~fl~l~t~a~~~QD~iLEPygg~Vfgmsv~eTT~Lta~~~~----G~L~G~~~~g~~l~~~~~~~~~a 278 (403)
T PF03209_consen 203 QVWASPQARRFFVFLFLGTLAFFMQDVILEPYGGEVFGMSVGETTRLTAFWGG----GTLLGMLLAGFLLSRRLGKKRTA 278 (403)
T ss_pred HHHhCCChhHHHHHHHHHHHHHHhhHHHcCCchhHHcCCCHHHHHHHHHHHHH----HHHHHHHHHHHHhcCCCCchHHH
Confidence 88888887777777766666655555544 44445589999999999888888 88888888888776 67788888
Q ss_pred HHHHHHHHHHHHHHHHhccccccchhHHHHHHHHHHHHHHHHHHHHHhhhccccCcchhhhhhHHHHHHHHHHHHHHHHH
Q 041759 394 LVLFIISGICSIMAVVANDISNAGKRMRIGLELASLFSAYIAYTVIFIYAIELFPTCVRNSATSIMRLAIIFAAIFSSVL 473 (525)
Q Consensus 394 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~r~~~~~~~~~~~~~g~~~~p~i 473 (525)
.+++....+++.++...... .+.+.+....++.|++.+.......+...++.+++..|..+|.-...+.++..++.++
T Consensus 279 ~~G~~~~~~~f~lii~a~~~--~~~~~~~~~~~l~G~g~G~f~vgals~mM~lt~~~~aG~~mG~WGaaQA~A~Glg~~~ 356 (403)
T PF03209_consen 279 ALGCLLGALAFALIILAGPL--GSPWLFRPGVFLLGLGNGLFTVGALSLMMDLTSAGRAGLFMGAWGAAQAIARGLGTFL 356 (403)
T ss_pred HHHHHHHHHHHHHHHHHHhc--ccchHHHHHHHHHHHhhhHHHHHHHHHHHhCCCCcchhHHHHHHHHHHHHHHHHHHHH
Confidence 88888888888777665443 2234677788888899888888888888899888888999998888886666666555
Q ss_pred Hh
Q 041759 474 VA 475 (525)
Q Consensus 474 ~~ 475 (525)
.|
T Consensus 357 GG 358 (403)
T PF03209_consen 357 GG 358 (403)
T ss_pred HH
Confidence 54
No 116
>PF03137 OATP: Organic Anion Transporter Polypeptide (OATP) family; InterPro: IPR004156 This family consists of several eukaryotic Organic-Anion-Transporting Polypeptides (OATPs). Several have been identified mostly in human and rat. Different OATPs vary in tissue distribution and substrate specificity. Since the numbering of different OATPs in particular species was based originally on the order of discovery, similarly numbered OATPs in humans and rats did not necessarily correspond in function, tissue distribution and substrate specificity (in spite of the name, some OATPs also transport organic cations and neutral molecules) so a scheme of using digits for rat OATPs and letters for human ones was introduced []. Prostaglandin transporter (PGT) proteins are also considered to be OATP family members. In addition, the methotrexate transporter OATK is closely related to OATPs. This family also includes several predicted proteins from Caenorhabditis elegans and Drosophila melanogaster. This similarity was not previously noted. Note: Members of this family are described (in the UniProtKB/Swiss-Prot database) as belonging to the SLC21 family of transporters.; GO: 0005215 transporter activity, 0006810 transport, 0016020 membrane; PDB: 3MRR_P.
Probab=99.65 E-value=1.3e-17 Score=167.75 Aligned_cols=359 Identities=14% Similarity=0.170 Sum_probs=3.0
Q ss_pred ccceeeccccccchhhhhhhHHHHHHHHHHHhHHhhHhcccccCCchHHHHHHHHHHHHHHHHHHhhh------------
Q 041759 100 ALTIISEWGLECSSAFIKGLPAASHFTGCLLGIVFLATLADSSLGRKNLLFLSCLTMSVATSLTIFSN------------ 167 (525)
Q Consensus 100 ~~~i~~~~~~~~~s~~~~g~~~s~~~lg~~~~~~~~G~l~dr~~Grk~~~~~~~~~~~i~~~~~~~~~------------ 167 (525)
+++++++|++ +..+.|++.+.+-++..+..++..++++| ..|-|.+-+|.+++++|++++++-+
T Consensus 26 lttiErRF~l---~S~~~G~i~s~~di~~~~~~~~vsy~g~~-~hrprwig~g~~~~~~g~~l~~lPhf~~~~y~~~~~~ 101 (539)
T PF03137_consen 26 LTTIERRFGL---SSSQSGLISSSYDIGSLVVVLFVSYFGGR-GHRPRWIGIGALLMGLGSLLFALPHFLSGPYSYEEAS 101 (539)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred HHHHHHhcCC---CHHHHHHHHHHHHHHHHHHHHHHHHHhhh-cCCcceeeecHHHHHHHHHHHhccHhhcCCCcccccc
Confidence 8899999999 99999999999999999999999999999 7777888899999999999877510
Q ss_pred --------------------------------------hHHHHHHHHHHHhhcccchhhhhheeeEeeecCcchhhHHhH
Q 041759 168 --------------------------------------NLWIYSLLRFFSGISRATIGTCTIVLLTEKVGTEWRGLVGIL 209 (525)
Q Consensus 168 --------------------------------------~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~ 209 (525)
-++.++++.++.|+|....++...+|+-|..++++-+..+|+
T Consensus 102 ~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~gq~l~GiG~~pl~tLG~tYiDDnv~~~~splYiGi 181 (539)
T PF03137_consen 102 NSNGNSSISSNLCDSSSSSQASSDCQDCCSSSSSSLSGYFYVFILGQLLIGIGATPLYTLGITYIDDNVSKKNSPLYIGI 181 (539)
T ss_dssp --------------------------------------------------SSS---------------------------
T ss_pred ccccccccccccccccccccccCccccccccccccchHHHHHHHHHHHHHhccccCCccceeeeeccccccccCccchhh
Confidence 135788899999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHhcc---------C-------------C-chHHHHHHHHHHHHHHHhHhheeecCCchHhhhcC
Q 041759 210 DSFFFTIGTLTLPAIAYTNR---------S-------------S-SWTIIYLWTSIPTLVYSGLLYIFVSESPRWLFMQG 266 (525)
Q Consensus 210 ~~~~~~~G~~l~~~l~~~~~---------~-------------~-~wr~~f~~~~~~~~~~~~~~~~~lpesp~~~~~~~ 266 (525)
..+...+|.++|.+++.... . . .|..-|++.+++.++.. +..+++|+... .+.
T Consensus 182 ~~~~~~lGPa~Gf~lg~~~L~~yvD~~~~~~~~~~i~p~dp~WvGAWWLGfli~g~~~~l~a-ipl~~FPk~lp---~~~ 257 (539)
T PF03137_consen 182 LYAMSILGPALGFLLGSFCLRIYVDFPKVPPDGVGITPSDPRWVGAWWLGFLICGILLFLSA-IPLFFFPKKLP---GTS 257 (539)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred hhHHhhccHHHHHHHHHHHHhceeCCccccccCCCCCCCCccHHHHHHHHHHHHHHHHHHHH-HHHHcCCccCC---Ccc
Confidence 99999999999998865321 0 1 26667777788777777 55555665321 110
Q ss_pred CHHHHHHHHHhhCCCcCCccchhhhhhhccCCCCcccccccccchhhhhhhhcchhHHHHHHHHHHHHHHHHHHHhhhhh
Q 041759 267 RQEEAVEVIKSLSPIKDSNQLSLSLVSAVSFGHEPAASSKESSFLSSIRELFVRRWALERTLALMVPGFGIGVVYYGMTL 346 (525)
Q Consensus 267 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 346 (525)
+.++.++. ++ + +.++...+ +..+++......++.+......+++++||.+....+......+.......+.|-
T Consensus 258 ~~~~~~~~-~~--~-~~~~~~~~---~~~~~~~~~~~~~~~~df~~~l~~Ll~Np~f~~~~la~~~~~~~~~G~~tF~pK 330 (539)
T PF03137_consen 258 ERQEEKES-SE--R-KEEDSDKD---SFKDPKSKKSFGKSIKDFPKALKRLLTNPVFMCLILAGVFESFIVSGFATFLPK 330 (539)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred cccchhhh-hh--c-chhhhhhh---cccccccccchhhhhhhHHHHHHHHhcChHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 00000000 00 0 00000000 000000000001112223357788999998776666666655555444444444
Q ss_pred -cccccCChhHHHHHHHHHhcccccccCchhHHHHHHHHHhhc--ChhHHHHHHHHHHHHHHH---HHHhc--c------
Q 041759 347 -GIENLGFDIYLGVVFNALLEIPNLASTIPSFFLTFFLIQKWN--RKSSLLVLFIISGICSIM---AVVAN--D------ 412 (525)
Q Consensus 347 -~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~d~~g--~~~~~~~~~~~~~~~~~~---~~~~~--~------ 412 (525)
+-.+++.++..+..+.+...+| +.++|.+++|++.+|++ .|..+....++..++.+. ..+.. +
T Consensus 331 ylE~QF~~sas~A~~l~G~v~ip---~~~~G~llGG~ivkk~kl~~~~~~~~~~v~~~v~~~~~~~~~~~~C~~~~~aGv 407 (539)
T PF03137_consen 331 YLESQFGLSASQASLLTGIVSIP---GAALGILLGGYIVKKFKLSARGAAKFCIVVSIVSVILYSPLFFLGCPNPPIAGV 407 (539)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred HHHHHhCCCHHHHHHHHhhhhcc---hhheehheEEEEEEEecCcHHHHHHHHHHHHHHHHHHHHHHHeecCCCCceeee
Confidence 4455888988888888776663 45578889999999975 344444443333333322 11110 0
Q ss_pred ---c-------c--------------------------c--cchhHHHHHHHHHHHHHHHHHHHHHhhhccccCcchhhh
Q 041759 413 ---I-------S--------------------------N--AGKRMRIGLELASLFSAYIAYTVIFIYAIELFPTCVRNS 454 (525)
Q Consensus 413 ---~-------~--------------------------~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~r~~ 454 (525)
. . . ..+....+..++..+..+..........-..+|+++|+.
T Consensus 408 ~~~y~~~~~~~~~~~~~~~Cn~~~~~~~~~a~~G~C~~~C~~~~~~Fl~~~~~~~~~~~~~~~p~~~i~LR~V~~~~rs~ 487 (539)
T PF03137_consen 408 TVPYHNSTSSSPSCNLTCSCNSCCSSGNGSATPGKCPSDCCNKLIPFLILLFILSFFTFMSQVPSTLITLRCVPPEQRSF 487 (539)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred cCccccccCCCCCCCCCCCCCCccCCCcccccCCCcCcccccccHHHHHHHHHHHHHHHhcccchheeeeccCChhhcch
Confidence 0 0 0 011122223333333333333444555667889999999
Q ss_pred hhHHHHHHH-HHHHHHHHHHHhh
Q 041759 455 ATSIMRLAI-IFAAIFSSVLVAA 476 (525)
Q Consensus 455 ~~~~~~~~~-~~g~~~~p~i~~~ 476 (525)
+.|+...+. -+|.+-+|++.|.
T Consensus 488 AlGv~~~~~rllg~IPgPIifG~ 510 (539)
T PF03137_consen 488 ALGVQWLIIRLLGFIPGPIIFGA 510 (539)
T ss_dssp -----------------------
T ss_pred hhhHHHHHHHhhcCcchHHHHhH
Confidence 999998776 5677889999985
No 117
>COG3104 PTR2 Dipeptide/tripeptide permease [Amino acid transport and metabolism]
Probab=99.65 E-value=2.8e-14 Score=136.24 Aligned_cols=379 Identities=13% Similarity=0.051 Sum_probs=231.4
Q ss_pred ccceeeccccccchhhhhhhHHHHHHHHHHHhHHhhHhcccccCCchHHHHHHHHHHHHHHHHHHhhh--hHHHHHHHHH
Q 041759 100 ALTIISEWGLECSSAFIKGLPAASHFTGCLLGIVFLATLADSSLGRKNLLFLSCLTMSVATSLTIFSN--NLWIYSLLRF 177 (525)
Q Consensus 100 ~~~i~~~~~~~~~s~~~~g~~~s~~~lg~~~~~~~~G~l~dr~~Grk~~~~~~~~~~~i~~~~~~~~~--~~~~l~~~r~ 177 (525)
..+..+.+|+ ++.++.-+.+.|.--.=+..+++|+++||..|+|+++..|.++..+|-++.+.+. +...+.++-+
T Consensus 49 ~~~~~~gLg~---~~~~A~~l~~~y~slVY~t~i~GG~laDr~LG~~~tI~lGail~~iGh~~L~~~~~~~~~gl~i~L~ 125 (498)
T COG3104 49 YYQLGDGLGF---DETHATGLFSAYGSLVYLTPIIGGWLADRVLGTRRTIVLGAILMAIGHLVLAISSVSGPGGLYIGLA 125 (498)
T ss_pred HHhccccCCc---ChHhhHHHHHHHHHHHHHHHHHHHHHHHHhcchhHHHHHHHHHHHHHHHHHhccccccccHHHHHHH
Confidence 4444555778 8888777777777777778899999999988999999999999999999999984 7889999999
Q ss_pred HHhhcccchhhhhheeeEeeecC--cchhhHHhHHHHHHHHHHHHHHHH-HHhccCCchHHHHHHHHHHHHHHHhHhhee
Q 041759 178 FSGISRATIGTCTIVLLTEKVGT--EWRGLVGILDSFFFTIGTLTLPAI-AYTNRSSSWTIIYLWTSIPTLVYSGLLYIF 254 (525)
Q Consensus 178 l~G~~~~~~~~~~~~~i~~~~~~--~~r~~~~~~~~~~~~~G~~l~~~l-~~~~~~~~wr~~f~~~~~~~~~~~~~~~~~ 254 (525)
+.++|.|..=+...+++.|.+|+ .+|...++++.++.++|.+++|++ +++....||+..|...++-..+.+ +.+..
T Consensus 126 ~I~iG~Gl~K~NiS~llg~ly~~~DprrD~gFt~fY~~iNiGsl~~p~i~~~~~~~~g~~~gF~~aavGm~~gl-~~f~~ 204 (498)
T COG3104 126 LIIVGTGLFKPNISSLLGELYPKDDPRRDGGFTLFYMGINIGSLIAPIITGLLAINYGWHVGFGLAAVGMIIGL-VIFLL 204 (498)
T ss_pred HHHhccccccccHHHHHHHhcCCCCcccCCCccEEEEEeehHHHHHHHHHHHHHHhhCHHHHHHHHHHHHHHHH-HHHHH
Confidence 99999999999999999999985 357778999999999999999998 777788999999999888777666 33333
Q ss_pred ecC----CchHhhhcC-CHHHHHHHH----HhhCCC-----cCCccchhhhhhhccCCCCcccccccccchhhhhhhhc-
Q 041759 255 VSE----SPRWLFMQG-RQEEAVEVI----KSLSPI-----KDSNQLSLSLVSAVSFGHEPAASSKESSFLSSIRELFV- 319 (525)
Q Consensus 255 lpe----sp~~~~~~~-~~~~~~~~~----~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~- 319 (525)
.+. ++..-..+. +..+..... ...... .+.+..........-.... ..+.+.++
T Consensus 205 ~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~i~~~~-----------~~~~~~~~~ 273 (498)
T COG3104 205 GRRHVKGIGGVPDPNPLSFNFLLPVLGGLVVMILAALLTLLLNQNTFSGVLLVISILIAI-----------IYFAEAFRS 273 (498)
T ss_pred ccchhcCCCCCCCccchhhhhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-----------HHHHHHhcc
Confidence 332 110000000 000000000 000000 0000000000000000000 00000000
Q ss_pred -----ch-h---HHHHHHHHHHHHHHHHHHHhhhhhcc-----cc-c--CChhHHHHHHHHHhcccccccCchhHHHHHH
Q 041759 320 -----RR-W---ALERTLALMVPGFGIGVVYYGMTLGI-----EN-L--GFDIYLGVVFNALLEIPNLASTIPSFFLTFF 382 (525)
Q Consensus 320 -----~~-~---~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~-~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 382 (525)
.+ + ....++...+.|.........+..+. .+ + ..++.+...+..+.-+ +..++..+
T Consensus 274 ~~~~~er~r~~~~~~Lfl~~~iFW~~~~Q~~ssl~~~a~~~v~~~~~g~~vp~~~fQslNp~~Ii-------i~~pI~a~ 346 (498)
T COG3104 274 PKVFDERRRLLAAIPLFLFAVIFWALYEQMGSSLNLYADRNVNRQIFGFEVPPAWFQSLNPFFII-------LFSPILAA 346 (498)
T ss_pred CccHHHHHHHHHHHHHHHHHHHHHHHHHhccchHHHHHHHhhcccccceecCHHHHHhhCHHHHH-------HHHHHHHH
Confidence 00 0 11112222222222222222222222 11 1 2344444444444444 66666667
Q ss_pred HHHhhcCh-------hHHHHHHHHHHHHHHHHHHh----cc-ccccchhHHHHHHHHHHHHHHHHHHHHHhhhccccCcc
Q 041759 383 LIQKWNRK-------SSLLVLFIISGICSIMAVVA----ND-ISNAGKRMRIGLELASLFSAYIAYTVIFIYAIELFPTC 450 (525)
Q Consensus 383 l~d~~g~~-------~~~~~~~~~~~~~~~~~~~~----~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~ 450 (525)
+..|.+++ .-+.++..+++.+++++... .. ....+.++.+...++..++.-...|+..+++....|+.
T Consensus 347 l~~~l~~~~~~ps~~~KFalGl~l~g~~fl~l~~~~~~~~~~~~~~s~~~lil~y~l~s~gEL~iSpvGLs~~t~laP~~ 426 (498)
T COG3104 347 LWTKLGRGNKQPSTPIKFALGLILAGLGFLILLLAGIWFGGPSGLVSVWWLVLSYVLQSFGELFISPVGLSMVTKLAPPA 426 (498)
T ss_pred HHhHhhcCCCCCCcchHHHHHHHHHHHHHHHHHHHHHhhcCCCCCcCHHHHHHHHHHHHHHHHHhCHHHHHHHHHhChHH
Confidence 77674333 23456666666666666554 11 21234557788888999999999999999999999999
Q ss_pred hhhhhhHHHHHHHHHHHHHHHHHHhh--------ccCchhHHHHHHHHHHHHHHHHHH
Q 041759 451 VRNSATSIMRLAIIFAAIFSSVLVAA--------GSNNEFVSYGVFGLVIICCGFFVI 500 (525)
Q Consensus 451 ~r~~~~~~~~~~~~~g~~~~p~i~~~--------~~~~~~~~~~~~~~~~~~~~~~~~ 500 (525)
..+..++........|+.++..+.+. ........|+.++...++..+..+
T Consensus 427 ~~s~~ma~wfLt~a~~~~l~g~va~~~~~~~~~~~~~~~~~~F~~~g~v~i~~~~~~~ 484 (498)
T COG3104 427 LKSFIMAMWFLTVAAGQTLGGQVAGLTAVTDPAYTAFIEGRVFGTIGVVAIVIGILLL 484 (498)
T ss_pred HHHHHHHHHHHHHHHHHHhhceecccccccchhhhhhhhhhhHHHHHHHHHHHHHHHH
Confidence 99999998888888887777666652 112344556666666555444433
No 118
>KOG3626 consensus Organic anion transporter [Secondary metabolites biosynthesis, transport and catabolism]
Probab=99.64 E-value=9.1e-15 Score=146.86 Aligned_cols=303 Identities=17% Similarity=0.168 Sum_probs=211.7
Q ss_pred HHHHHHHHHHHHHHHHHHhhhcccCccccccCCCCCCCCCCCCCCCCCCceecCCCCccccceeeccccccchhhhhhhH
Q 041759 41 QAILVSLASLFDSQQSFISVYTEAEPTWHCLNNTTCSSASNICMFPKSSWAWDGNPTTTALTIISEWGLECSSAFIKGLP 120 (525)
Q Consensus 41 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~c~~~~~~~~~~~~p~~~~~~i~~~~~~~~~s~~~~g~~ 120 (525)
.+.++++..+..++....+... +..+.+.|++ +..+.|++
T Consensus 98 fl~~l~~~~~~q~l~~~y~~s~-------------------------------------IttiErRF~i---~Ss~sG~I 137 (735)
T KOG3626|consen 98 FLVLLSLAAFAQGLYVGYFNSV-------------------------------------ITTIERRFKI---SSSQSGLI 137 (735)
T ss_pred HHHHHHHHHHHHHhhhhhhhhh-------------------------------------hhhhhhhcCC---CCCcceeE
Confidence 5666666677777666555555 8899999999 99999999
Q ss_pred HHHHHHHHHHhHHhhHhcccccCCchHHHHHHHHHHHHHHHHHHhhh---------------------------------
Q 041759 121 AASHFTGCLLGIVFLATLADSSLGRKNLLFLSCLTMSVATSLTIFSN--------------------------------- 167 (525)
Q Consensus 121 ~s~~~lg~~~~~~~~G~l~dr~~Grk~~~~~~~~~~~i~~~~~~~~~--------------------------------- 167 (525)
.+.+=++..+...+..+++-| .-|-+.+-+|.+++++++++.++-+
T Consensus 138 ~s~~dig~~l~i~fVsYfG~r-~HrPr~Ig~G~~~m~lgsll~alPHf~~~~y~~~~~~~~~~~~~~~~~~s~~~~~~~~ 216 (735)
T KOG3626|consen 138 ASSYDIGNLLLIIFVSYFGSR-GHRPRWIGIGLVLMGLGSLLFALPHFFSGPYEYELEVIKQSVENPSSSLSFCCCNKST 216 (735)
T ss_pred eeecccchhhhhHhHHHhccc-cCccceeeechhHHHHHHHHHhChHHhcCcchhhhhhhhccccCCccccchhhccCCc
Confidence 999999999999999999999 7777888999999999999988720
Q ss_pred -------------------hHHHHHHHHHHHhhcccchhhhhheeeEeeecCcchhhHHhHHHHHHHHHHHHHHHHHHhc
Q 041759 168 -------------------NLWIYSLLRFFSGISRATIGTCTIVLLTEKVGTEWRGLVGILDSFFFTIGTLTLPAIAYTN 228 (525)
Q Consensus 168 -------------------~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~l~~~l~~~~ 228 (525)
-+..++++.++.|+|....++.+.+|+-|...+++-...+++..+...+|.++|.++|.+.
T Consensus 217 ~~~~~~~~~~~~~~~~~~~~~llff~~q~l~GIG~Tpi~tlGisYiDDnvk~~~SplYlgi~~~~~~lGPaiGfllgS~~ 296 (735)
T KOG3626|consen 217 NLCRPSPENSKREKESTSYPFLLFFLGQLLLGIGATPIFTLGISYIDDNVKKKNSPLYLGILYSMAILGPAIGFLLGSFC 296 (735)
T ss_pred cccCCCCCcccccccCCchhHHHHHHHHHHhhcCCCCCccCCCccccccccccCCcHHHHHHHHHHHhhhHHHHHHHHHH
Confidence 0226778889999999999999999999999999999999999999999999999996653
Q ss_pred c----C----------------CchHHHHHHHHHHHHHHHhHhheeecCCchHhhhcCCHHHHHHHHHhhCCCcCCccch
Q 041759 229 R----S----------------SSWTIIYLWTSIPTLVYSGLLYIFVSESPRWLFMQGRQEEAVEVIKSLSPIKDSNQLS 288 (525)
Q Consensus 229 ~----~----------------~~wr~~f~~~~~~~~~~~~~~~~~lpesp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 288 (525)
. + --|+.-|++.+.+.++.. +.++++|.... ...++.+.+ ..+.. +++.+
T Consensus 297 l~lYvD~~~~~~~it~~DPrWIGAWWlGFLi~g~~~~~~a-~p~f~fPk~lp---~~~~~~~~~-~~~~~---k~~~~-- 366 (735)
T KOG3626|consen 297 LKLYVDFGLSPIGITPTDPRWIGAWWLGFLICGALLLFSA-VPLFFFPKELP---KSQKRKRAR-DLHVL---KTESG-- 366 (735)
T ss_pred HHeeeccccCCCCCCCCCcchhhHHHHHHHHHHHHHHHHH-HHHHhCcccCc---cccccchhh-hhccc---ccccc--
Confidence 1 0 137777888888888888 55666665431 011110000 00000 00000
Q ss_pred hhhhhhccCCCCcccccccccchhhhhhhhcchhHHHHHHHHHHHHHHHHHHHhhhhhcc-cccCChhHHHHHHHHHhcc
Q 041759 289 LSLVSAVSFGHEPAASSKESSFLSSIRELFVRRWALERTLALMVPGFGIGVVYYGMTLGI-ENLGFDIYLGVVFNALLEI 367 (525)
Q Consensus 289 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~ 367 (525)
.+++.....++-+......+++++||.+...++...+-.........++|-++ +++|.+.+.+..+.+...+
T Consensus 367 -------~~~~~~~~~~~ikdfp~s~~~ll~N~if~~~~l~~~~~~~~~~G~~tFlPKyLE~Qfg~sas~An~l~G~i~v 439 (735)
T KOG3626|consen 367 -------GAKSDKTFGKKIKDFPKSIKRLLSNPIFMLVVLASVIESLAITGYITFLPKYLETQFGISASLANILTGSIGV 439 (735)
T ss_pred -------cccCCcchhhhHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHhhHHHhhHHHHHHHcCCCHHHHHHHhhhhhh
Confidence 00000000001112235788899999877666666665555544444455555 5589999999999888777
Q ss_pred cccccCchhHHHHHHHHHhhcC--hhHHHHHHHHHHHHH
Q 041759 368 PNLASTIPSFFLTFFLIQKWNR--KSSLLVLFIISGICS 404 (525)
Q Consensus 368 ~~~~~~~~~~~~~~~l~d~~g~--~~~~~~~~~~~~~~~ 404 (525)
|. ..+|.+++|++++|+.. |....+.++...+.+
T Consensus 440 p~---~~~Gi~lGG~iikkfkl~~r~~a~~~~~~~~l~l 475 (735)
T KOG3626|consen 440 PA---AAVGIFLGGLIIKKFKLSARGAAKFVIVCSVLSL 475 (735)
T ss_pred hh---hhhhhhccceeeeeecccHHHHHHHHHHHHHHHH
Confidence 43 34677899999999753 444444444433333
No 119
>KOG2325 consensus Predicted transporter/transmembrane protein [General function prediction only]
Probab=99.63 E-value=2.9e-15 Score=144.53 Aligned_cols=149 Identities=17% Similarity=0.163 Sum_probs=123.2
Q ss_pred ccccccchhhhhhhHHHHHHHHHHHhHHhhHhcccccCCc-hHHHHHHHHHHHHHHHHH-Hhh---h-hHHHHHHHHHHH
Q 041759 106 EWGLECSSAFIKGLPAASHFTGCLLGIVFLATLADSSLGR-KNLLFLSCLTMSVATSLT-IFS---N-NLWIYSLLRFFS 179 (525)
Q Consensus 106 ~~~~~~~s~~~~g~~~s~~~lg~~~~~~~~G~l~dr~~Gr-k~~~~~~~~~~~i~~~~~-~~~---~-~~~~l~~~r~l~ 179 (525)
|.+. +....|++.++..+|.+++++..|+...| .|+ |+.++.|.++..+|+++. ++. + ..+.++++|++.
T Consensus 65 D~~A---~~~ffG~viaa~slg~~i~~liF~~Ws~k-~~~~k~Pli~s~ii~~~g~llY~~l~~~~~~~~y~mL~~R~l~ 140 (488)
T KOG2325|consen 65 DPTA---TATFFGLVIAASSLGHAIFSLIFGIWSNK-TGSVKKPLIVSFLIAIIGNLLYLALAYVPNGVKYLMLVARILT 140 (488)
T ss_pred CCCC---CcchhhHHHHHHHHHHHhcchhhcccccc-cCCcccCHHHHHHHHHHHHHHHHHHHhcccchHHHHHHHHHHc
Confidence 3555 78899999999999999999999999999 876 888999999999999988 332 3 678999999999
Q ss_pred hhcccchhhhhheeeEeeecCcchhhHHhHHHHHHHHHHHHHHHHHHhcc---CC-----------chHHHHHHHHHHHH
Q 041759 180 GISRATIGTCTIVLLTEKVGTEWRGLVGILDSFFFTIGTLTLPAIAYTNR---SS-----------SWTIIYLWTSIPTL 245 (525)
Q Consensus 180 G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~l~~~l~~~~~---~~-----------~wr~~f~~~~~~~~ 245 (525)
|+|.| .....-+|+++-...++|.|+++....+..+|.++||.++.... +- -+..+-|+.+++.+
T Consensus 141 Gvg~~-n~a~lR~Y~a~~s~~~dR~rA~a~~~~~~vlg~ilGp~~q~~f~~Lg~~G~~i~~~~~~n~YTap~w~m~i~~i 219 (488)
T KOG2325|consen 141 GVGVG-NFAVLRAYIADASTVEDRPRAFAATSGGFVLGIILGPTIQLAFTPLGEKGFMILPGLIFNMYTAPAWLMAILWI 219 (488)
T ss_pred CcCcc-cHHHHHHHHHhccCccchHHHHHHhhhHHHHHHHHhHHHHHHHhhhcCCceEEcCcceEEecchHHHHHHHHHH
Confidence 99988 56778899999888899999999999988999999888754332 11 12346678888888
Q ss_pred HHHhHhheeecCCc
Q 041759 246 VYSGLLYIFVSESP 259 (525)
Q Consensus 246 ~~~~~~~~~lpesp 259 (525)
+..+++.++++|.+
T Consensus 220 ~~~v~i~~~f~E~~ 233 (488)
T KOG2325|consen 220 IYIVIILFFFKEVY 233 (488)
T ss_pred HHHHHHHhheeecc
Confidence 88877788888865
No 120
>PRK10642 proline/glycine betaine transporter; Provisional
Probab=99.61 E-value=6.9e-15 Score=149.35 Aligned_cols=171 Identities=13% Similarity=0.059 Sum_probs=128.9
Q ss_pred eeeccccccchhhhhhhHHHHHHHHHHHhHHhhHhcccccCCchHHHHHHHHHHHHHHHH---HHhhhhHHHHHHHHHHH
Q 041759 103 IISEWGLECSSAFIKGLPAASHFTGCLLGIVFLATLADSSLGRKNLLFLSCLTMSVATSL---TIFSNNLWIYSLLRFFS 179 (525)
Q Consensus 103 i~~~~~~~~~s~~~~g~~~s~~~lg~~~~~~~~G~l~dr~~Grk~~~~~~~~~~~i~~~~---~~~~~~~~~l~~~r~l~ 179 (525)
+++++|. +..+.++..+...++..++.++.|+++|| +|||+++.++.++..++.+. ...+++...++++|++.
T Consensus 277 l~~~~g~---s~~~~~~~~~~~~~~~~~~~~~~g~l~dr-~grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 352 (490)
T PRK10642 277 LSHNLHY---SEDHGVLIIIAIMIGMLFVQPVMGLLSDR-FGRRPFVILGSVALFVLAIPAFILINSNVIGLIFAGLLML 352 (490)
T ss_pred HHHhcCC---CHHHHHHHHHHHHHHHHHHHHHHHHHHHH-hccHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHH
Confidence 3456788 77778888888999999999999999999 99999988887654443332 22345677888899999
Q ss_pred hhcccchhhhhheeeEeeecCcchhhHHhHHHHHHHHHHHHHHHH-HHhccC-CchHHHHHHHHHHHHHHHhHhheeecC
Q 041759 180 GISRATIGTCTIVLLTEKVGTEWRGLVGILDSFFFTIGTLTLPAI-AYTNRS-SSWTIIYLWTSIPTLVYSGLLYIFVSE 257 (525)
Q Consensus 180 G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~l~~~l-~~~~~~-~~wr~~f~~~~~~~~~~~~~~~~~lpe 257 (525)
|++.+........++.|.+|++.|++.+++......++..++|.+ +++.+. .+|+.++++..+++++.. +..+++||
T Consensus 353 g~~~~~~~g~~~~~~~~~~p~~~Rg~~~g~~~~~~~~~g~~~p~i~g~l~~~~~~~~~~~~~~~~~~~i~~-~~~~~~pe 431 (490)
T PRK10642 353 AVILNCFTGVMASTLPAMFPTHIRYSALAAAFNISVLVAGLTPTLAAWLVESTQNLMMPAYYLMVVAVIGL-ITGVTMKE 431 (490)
T ss_pred HHHHHHHHHHHHHHHHHHCCCccchHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCchHHHHHHHHHHHHHH-HHHHHhcc
Confidence 988777777777788899999999999987433344445566655 665543 357877777777766666 55567799
Q ss_pred CchHhhhc-----CCHHHHHHHHHhh
Q 041759 258 SPRWLFMQ-----GRQEEAVEVIKSL 278 (525)
Q Consensus 258 sp~~~~~~-----~~~~~~~~~~~~~ 278 (525)
+|+|+.++ +|.+|+++.++++
T Consensus 432 s~~~~~~~~~~~~~~~~~a~~~l~~~ 457 (490)
T PRK10642 432 TANRPLKGATPAASDIQEAKEILVEH 457 (490)
T ss_pred ccCCCCCCccccccchhhHHHHhhcc
Confidence 99998755 8888888888877
No 121
>TIGR00880 2_A_01_02 Multidrug resistance protein.
Probab=99.59 E-value=4.7e-15 Score=123.48 Aligned_cols=137 Identities=23% Similarity=0.288 Sum_probs=122.0
Q ss_pred HHHHHHHHHHHhHHhhHhcccccCCchHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHhhcccchhhhhheeeEeeec
Q 041759 120 PAASHFTGCLLGIVFLATLADSSLGRKNLLFLSCLTMSVATSLTIFSNNLWIYSLLRFFSGISRATIGTCTIVLLTEKVG 199 (525)
Q Consensus 120 ~~s~~~lg~~~~~~~~G~l~dr~~Grk~~~~~~~~~~~i~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~ 199 (525)
+.+.+.++..+++++.|++.|| +|||+.+..+..+..++.+...+.++++.+.+.+++.|++.+...+....++.|..|
T Consensus 3 ~~~~~~~~~~~~~~~~g~~~d~-~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~ 81 (141)
T TIGR00880 3 LLAGYALGQLIYSPLSGLLTDR-FGRKPVLLVGLFIFVLSTAMFALSSNITVLIIARFLQGFGAAFALVAGAALIADIYP 81 (141)
T ss_pred EEEeehhHHHHHHhhHHHHHhh-cchhHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHhHHHHHHHHCC
Confidence 4456778899999999999999 999999999999999999999899999999999999999999999999999999999
Q ss_pred CcchhhHHhHHHHHHHHHHHHHHHH-HHhccCCchHHHHHHHHHHHHHHHhHhheeecC
Q 041759 200 TEWRGLVGILDSFFFTIGTLTLPAI-AYTNRSSSWTIIYLWTSIPTLVYSGLLYIFVSE 257 (525)
Q Consensus 200 ~~~r~~~~~~~~~~~~~G~~l~~~l-~~~~~~~~wr~~f~~~~~~~~~~~~~~~~~lpe 257 (525)
+++|++..++.+....+|..+++.+ +.+.+..+|++.+++.++..++..+..+++.||
T Consensus 82 ~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 140 (141)
T TIGR00880 82 PEERGVALGLMSAGIALGPLLGPPLGGVLAQFLGWRAPFLFLAILALAAFILLAFLLPE 140 (141)
T ss_pred hhhhhHHHHHHHHhHHHHHHHhHHhHHHHhcccchHHHHHHHHHHHHHHHHHHhhcCCC
Confidence 9999999999999999999999988 555566799999999888887777555555565
No 122
>PF03092 BT1: BT1 family; InterPro: IPR004324 Members of this family are transmembrane proteins. Several are Leishmania putative proteins that are thought to be pteridine transporters [, ]. This family also contains five putative Arabidopsis thaliana proteins of unknown function as well as two predicted prokaryotic proteins (from the cyanobacteria Synechocystis and Synechococcus).
Probab=99.56 E-value=2.2e-13 Score=134.75 Aligned_cols=373 Identities=14% Similarity=0.133 Sum_probs=223.7
Q ss_pred ccceeeccccccchhhhhhhHHHHHHHHHHHhHHhhHhcccccC-----CchHHHHHHHHHHHHHHHHHHhh----hhHH
Q 041759 100 ALTIISEWGLECSSAFIKGLPAASHFTGCLLGIVFLATLADSSL-----GRKNLLFLSCLTMSVATSLTIFS----NNLW 170 (525)
Q Consensus 100 ~~~i~~~~~~~~~s~~~~g~~~s~~~lg~~~~~~~~G~l~dr~~-----Grk~~~~~~~~~~~i~~~~~~~~----~~~~ 170 (525)
.+-+++++|+ ++.+.....++..+...+- ++.|.++|. + -||+.++++.++..++.+..+.. .+..
T Consensus 13 ~~~l~~~l~l---s~~~~~~~~~~~~lPw~~K-p~~g~lsD~-~pi~G~rr~~Y~~i~~~~~~~~~~~~~~~~~~~~s~~ 87 (433)
T PF03092_consen 13 YPFLKDDLGL---SPAQLQRLSSLASLPWSIK-PLYGLLSDS-FPIFGYRRKPYMIIGWLLGAVSALVLALLPASESSAA 87 (433)
T ss_pred HHHHHHHcCC---CHHHHHHHHHHHhCchHHh-hhHHhhccc-ccccCCcchHHHHHHHHHHHHHHHHHHhcccccchhh
Confidence 6778999999 9999999999998887755 568999998 5 35666777887776666655553 3567
Q ss_pred HHHHHHHHHhhcccchhhhhheeeEeeec--CcchhhHHhHHHHHHHHHHHHHHHH-HHhccCCchHHHHHHHHHHHHHH
Q 041759 171 IYSLLRFFSGISRATIGTCTIVLLTEKVG--TEWRGLVGILDSFFFTIGTLTLPAI-AYTNRSSSWTIIYLWTSIPTLVY 247 (525)
Q Consensus 171 ~l~~~r~l~G~~~~~~~~~~~~~i~~~~~--~~~r~~~~~~~~~~~~~G~~l~~~l-~~~~~~~~wr~~f~~~~~~~~~~ 247 (525)
...+.-++..+|.+.....+-+++.|... ++.||...+.......+|.+++..+ |.+....++|..|.+.+++.++.
T Consensus 88 ~~~~~l~la~~g~a~~DV~aDa~vvE~~~~~p~~~g~lqS~~~~~~~~G~lv~~~l~G~l~~~~~~~~~f~i~~~~~~l~ 167 (433)
T PF03092_consen 88 IAVVLLFLASFGYAFADVAADALVVELARREPESRGDLQSFVWGVRSVGSLVGSLLSGPLLDSFGPQGVFLISAALPLLM 167 (433)
T ss_pred hHHHHHHHHHHHHHHHHHhhhHHHHHHhhcCCchhHHHHHHHHHHHHHHHHHHHHhhhhhhhcCCCeEEehHHHHHHHHH
Confidence 77777888999999999999999999874 3447888888888999999999887 67777889999999988887777
Q ss_pred HhHhheeecCCchHhhhcCCHHHHHHHHHhhCCCcCCccchhhhhhhccCCCCcccccccccchhhhhhhhcchhHHHHH
Q 041759 248 SGLLYIFVSESPRWLFMQGRQEEAVEVIKSLSPIKDSNQLSLSLVSAVSFGHEPAASSKESSFLSSIRELFVRRWALERT 327 (525)
Q Consensus 248 ~~~~~~~lpesp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~ 327 (525)
.+...+..+|.+. + +.++... . . ++..+.... .-+......++.++.+..+...
T Consensus 168 ~~~~~~~~~e~~~----~-~~~~~~~----~-~-~~~~~~~~~---------------~~~~~~~~l~~~~~~~~i~~~~ 221 (433)
T PF03092_consen 168 LIVALFLLEERKV----R-PADEVFS----F-G-KEEVPCLFG---------------SFREQLSELWRALQQRAIWQPI 221 (433)
T ss_pred HHHHHHhhhhccc----c-ccchhhc----c-c-ccccchhhH---------------HHHHHHHHHHHHHhhhHHHHHH
Confidence 6455555554211 0 0000000 0 0 000000000 0000013566677777766655
Q ss_pred H-HHHHHHHHHHHHHh-hhhhcccccC---ChhHHHHHHHHHhcccccccCchhHHHHHHHHHhhcChhHHHHHHHHHHH
Q 041759 328 L-ALMVPGFGIGVVYY-GMTLGIENLG---FDIYLGVVFNALLEIPNLASTIPSFFLTFFLIQKWNRKSSLLVLFIISGI 402 (525)
Q Consensus 328 ~-~~~~~~~~~~~~~~-~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~d~~g~~~~~~~~~~~~~~ 402 (525)
+ ..++..+......- ...+.....+ +++...+....+..+ +.++|..+......+..-|+++..+.++..+
T Consensus 222 ~~~~~~~~~~~~~~~a~~fy~~~~~~~gp~fs~~f~~~~~~vg~~----~~l~g~~~y~~~~~~~~~R~~~~~t~~~~~~ 297 (433)
T PF03092_consen 222 LFFIFFFNLPPSISSASSFYFQTDALGGPHFSPSFYGTLSIVGSI----ASLLGILLYRKYFSNWSWRRIFVVTTLVSVL 297 (433)
T ss_pred HHHHHHHHhccCCCCccEEEEEeccccccccCHHHHHHHHHHHHH----HHHHHHHHHHHHHhCCCHHHHHHHHHHHHHH
Confidence 5 22222221111000 0011112233 565555544433333 4446666666655566667776666655554
Q ss_pred HHHHHHHh-cccc-----ccchhHHHHHHHHHHHHHHHHHHHHHhhhccccCcchhhhhhHHHHHHHHHHHHHHHHHHhh
Q 041759 403 CSIMAVVA-NDIS-----NAGKRMRIGLELASLFSAYIAYTVIFIYAIELFPTCVRNSATSIMRLAIIFAAIFSSVLVAA 476 (525)
Q Consensus 403 ~~~~~~~~-~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~r~~~~~~~~~~~~~g~~~~p~i~~~ 476 (525)
..+.-... ...+ .+.+ ..+.-.++........+-....+++|+.|+...|+.+++...+.++|..++..+...
T Consensus 298 ~~l~~~~lv~~~n~~~Gi~d~~-f~lgd~~l~~~~~~i~~mP~lvl~a~lcP~G~Egt~yall~s~~Nlg~~~s~~lg~~ 376 (433)
T PF03092_consen 298 ASLFDLLLVTRWNLDLGIPDQW-FALGDTILEEVIGMIAFMPSLVLAARLCPKGSEGTVYALLASFSNLGSSVSSTLGAF 376 (433)
T ss_pred HhcccEEEEEEEeeeeCcCCeE-EEEEhHHHHHHHHHHHHHHHHHHHHHHCCCCchHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 43322111 1000 0112 223334444455555555666788999999999999999999999988877766642
Q ss_pred -----c--c---CchhHHHHHHHHHHHHHHHHHHhccCCCCC
Q 041759 477 -----G--S---NNEFVSYGVFGLVIICCGFFVICLPETRGS 508 (525)
Q Consensus 477 -----~--~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 508 (525)
. . .+.....++..++.++...+..++|+.++.
T Consensus 377 l~~~~~vt~~~f~~l~~lili~~~~~ll~l~ll~lLp~~~~~ 418 (433)
T PF03092_consen 377 LMELFGVTRDDFSNLWLLILICSVIQLLPLPLLFLLPPQKRI 418 (433)
T ss_pred HHHHcCCCcccccchHHHHHHHHHHHHHHHHHHHHcCCCchh
Confidence 1 1 122333444455555555556667775543
No 123
>KOG2816 consensus Predicted transporter ADD1 (major facilitator superfamily) [General function prediction only]
Probab=99.56 E-value=2.4e-12 Score=126.42 Aligned_cols=312 Identities=17% Similarity=0.150 Sum_probs=206.3
Q ss_pred HHHHHHHHhHHhhHhcccccCCchHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHhhccc--chhhhhheeeEeeecC
Q 041759 123 SHFTGCLLGIVFLATLADSSLGRKNLLFLSCLTMSVATSLTIFSNNLWIYSLLRFFSGISRA--TIGTCTIVLLTEKVGT 200 (525)
Q Consensus 123 ~~~lg~~~~~~~~G~l~dr~~Grk~~~~~~~~~~~i~~~~~~~~~~~~~l~~~r~l~G~~~~--~~~~~~~~~i~~~~~~ 200 (525)
...+...+.++..|.++|| +|||..+.+..+...+..+...+.. |++++ +.|+..+ .......++++|....
T Consensus 70 ~~~~~~~i~s~~iG~lSD~-~grk~~L~~~~~~~~l~~~~~~~~~--~~~~~---~~~l~g~~~~~~s~~~a~vadis~~ 143 (463)
T KOG2816|consen 70 TAGLLTLISSPLIGALSDR-YGRKVVLLLPLFGTILPALCLLFQG--YWFFL---LLGLSGGFSAIFSVGFAYVADISSE 143 (463)
T ss_pred hhHHHHHHHHhhhHHhhhh-hhhhhhHHHHHHHHHHhHHHHHHHH--HHHhh---hcccccchhhhhhhhhhheeeccch
Confidence 4466778888999999999 9999999999999988888887766 33433 4444333 3556677889999999
Q ss_pred cchhhHHhHHHHHHHHHHHHHHHH-HHhccCCchHHHHHHHHHHHHHHHhHhheeecCCchHhhhcCCHHHHHHHHHhhC
Q 041759 201 EWRGLVGILDSFFFTIGTLTLPAI-AYTNRSSSWTIIYLWTSIPTLVYSGLLYIFVSESPRWLFMQGRQEEAVEVIKSLS 279 (525)
Q Consensus 201 ~~r~~~~~~~~~~~~~G~~l~~~l-~~~~~~~~wr~~f~~~~~~~~~~~~~~~~~lpesp~~~~~~~~~~~~~~~~~~~~ 279 (525)
++|....++.......+..++|.+ ++.....|.-..|.+..+..++..+...+++||+-.. +++.+ ...++..
T Consensus 144 ~~R~~~~gll~~~~~~~~~~~p~~~~~~~~~~~~a~~f~ia~~~~~~~~~y~~~~l~Esl~~---~~~~~---~~~~~~~ 217 (463)
T KOG2816|consen 144 EERSSSIGLLSGTFGAGLVIGPALGGYLVKFLGIALVFLIAAASGILSLLYMLLFLPESLQE---KERSD---ATLRELT 217 (463)
T ss_pred hHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHhhccccccCc---ccccc---ccccccC
Confidence 999999999999999999999998 5555667888899999999999888888999997421 11100 0000000
Q ss_pred CCcCCccchhhhhhhccCCCCcccccccccchhhhhhhhcchhHHHHHHHHHHHHHHHHHHHh-hhhhcc-cccCChhHH
Q 041759 280 PIKDSNQLSLSLVSAVSFGHEPAASSKESSFLSSIRELFVRRWALERTLALMVPGFGIGVVYY-GMTLGI-ENLGFDIYL 357 (525)
Q Consensus 280 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~-~~~~~~~~~ 357 (525)
.+........ + ........-.+|..+......++.......... ..++++ ..++++...
T Consensus 218 ~~~~~~~~~~----------~---------~~~~~~~~~~~r~~l~l~l~~~~~~~~~~~~~~~~~~~yl~~~f~w~~~~ 278 (463)
T KOG2816|consen 218 PGSLDSSHVA----------D---------AFQSLTKVGPDRLLLLLLLVAFLSSLPEAGGASDVLLLYLKAKFGWNKKE 278 (463)
T ss_pred CCcccchhhh----------h---------hhhhhcccCCCccchHHHHHHHHHHHHHhcCceeEEEEEEeeecCcCHHH
Confidence 0000000000 0 000111111112111112222221111111111 123333 347888887
Q ss_pred HHHHHHHhcccccccCchhHHHHH-HHHHhhcChhHHHHHHHHHHHHHHHHHHhccccccchhHHHHHHHHHHHHHHHHH
Q 041759 358 GVVFNALLEIPNLASTIPSFFLTF-FLIQKWNRKSSLLVLFIISGICSIMAVVANDISNAGKRMRIGLELASLFSAYIAY 436 (525)
Q Consensus 358 ~~~~~~~~~~~~~~~~~~~~~~~~-~l~d~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 436 (525)
.+.+.+...+ ...++.++.. .+...++.|+....|...-.+..+.+.+.... | ..+ .............
T Consensus 279 ~s~~~~~~~~----~~~i~~l~~~~~l~~~l~~~~~i~lGl~~~~~~~~~~af~~~~----w-~~~-~~~v~~~~~~~~~ 348 (463)
T KOG2816|consen 279 FSDLLSLVSI----LGIISQLLLLPLLSSILGEKRLISLGLLSEFLQLLLFAFATET----W-MMF-AAGVVVALAGIVF 348 (463)
T ss_pred HHHHHHHHHH----HHHHHHHHHHHHHHHHHhhhhHhhHHHHHHHHHHHHHHHhccc----h-hhh-HHHHHHHhhcchh
Confidence 7766666665 3335555555 67777888888889999889998888887766 3 333 3333445556777
Q ss_pred HHHHhhhccccCcchhhhhhHHHHHHHHHHHHHHHHHHh
Q 041759 437 TVIFIYAIELFPTCVRNSATSIMRLAIIFAAIFSSVLVA 475 (525)
Q Consensus 437 ~~~~~~~~~~~p~~~r~~~~~~~~~~~~~g~~~~p~i~~ 475 (525)
+...++.+...+++.+|+++++...+..+.++++|.+.+
T Consensus 349 pa~~s~~s~~v~~~e~g~v~~~is~i~~l~~~~~~~~~~ 387 (463)
T KOG2816|consen 349 PAIRAFASILVSPEEQGKVFGIISGIEGLSGVVSPALYG 387 (463)
T ss_pred HHHHhHHHhhcccccccchhhHHHHHHHHhhhhhHHHHH
Confidence 888899999999999999999999999999999998887
No 124
>PRK09528 lacY galactoside permease; Reviewed
Probab=99.47 E-value=3e-13 Score=134.93 Aligned_cols=145 Identities=15% Similarity=0.139 Sum_probs=125.4
Q ss_pred hhhhhhhHHHHHHHHHHHhHHhhHhcccccCCchHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHhhcccchhhhhhe
Q 041759 113 SAFIKGLPAASHFTGCLLGIVFLATLADSSLGRKNLLFLSCLTMSVATSLTIFSNNLWIYSLLRFFSGISRATIGTCTIV 192 (525)
Q Consensus 113 s~~~~g~~~s~~~lg~~~~~~~~G~l~dr~~Grk~~~~~~~~~~~i~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~ 192 (525)
+..+.|++.++..++..++.+++|++.|| +|||+.+..+.++.+++.++.+++++.+.+++.+++.|++.+...+....
T Consensus 260 ~~~~~g~~~~~~~~~~~~~~~~~g~l~dr-~g~~~~~~~~~~l~~~~~~l~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~ 338 (420)
T PRK09528 260 GTRVFGYLNSFQVFLEALIMFFAPFIINR-IGAKNALLLAGTIMAVRIIGSGFATGPLEVSILKLLHAFEVPFLLVGVFK 338 (420)
T ss_pred chHHHHHHHHHHHHHHHHHHHHHHHHHHH-hCcchhhHHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 66788999999999999999999999999 99999999999999999999999999999999999999999888888888
Q ss_pred eeEeeecCcchhhHHhH-HHHHHHHHHHHHHHH-HHhccCCchHHHHHHHHHHHHHHHhHhheeecCC
Q 041759 193 LLTEKVGTEWRGLVGIL-DSFFFTIGTLTLPAI-AYTNRSSSWTIIYLWTSIPTLVYSGLLYIFVSES 258 (525)
Q Consensus 193 ~i~~~~~~~~r~~~~~~-~~~~~~~G~~l~~~l-~~~~~~~~wr~~f~~~~~~~~~~~~~~~~~lpes 258 (525)
++.|.+|++.|+...+. ++....+|.++++.+ +.+.+..|||..|.+.+++.++..++.++.+++.
T Consensus 339 ~~~~~~~~~~~a~~~~~~~~~~~~lg~~ig~~~~G~l~~~~G~~~~f~~~~~~~~i~~~~~~~~~~~~ 406 (420)
T PRK09528 339 YITLNFDVRLSATIYLVGFQFAKQLGAVFLSTLAGNLYDSIGFQGTYLILGGIVLLFTLISVFTLSGD 406 (420)
T ss_pred HHHHHcCccceeeeeeehHHHHHHHHHHHHHHHHHHHHHhhCchHHHHHHHHHHHHHHHHHHHHhcCC
Confidence 99999999988887655 677788999999888 6777778999999998888877664555555543
No 125
>TIGR00889 2A0110 nucleoside transporter. This family of proteins transports nucleosides at a high affinity. The transport mechanism is driven by proton motive force. This family includes nucleoside permease NupG and xanthosine permease from E.Coli.
Probab=99.47 E-value=2.1e-13 Score=135.30 Aligned_cols=145 Identities=13% Similarity=0.125 Sum_probs=124.6
Q ss_pred hhhhhhHHHHHHHHHHHhHHhhHhcccccCCchHHHHHHHHHHHHHHHHHHhhh----hHHHHHHHHHHHhhcccchhhh
Q 041759 114 AFIKGLPAASHFTGCLLGIVFLATLADSSLGRKNLLFLSCLTMSVATSLTIFSN----NLWIYSLLRFFSGISRATIGTC 189 (525)
Q Consensus 114 ~~~~g~~~s~~~lg~~~~~~~~G~l~dr~~Grk~~~~~~~~~~~i~~~~~~~~~----~~~~l~~~r~l~G~~~~~~~~~ 189 (525)
....+...++..++..++.++.|+++|| +|||+++.++.++.+++..+..... +++.+++.+++.|++.+...+.
T Consensus 250 ~~~~g~~~~~~~i~~i~~~~~~g~l~dr-~g~r~~l~~~~~~~~v~~~l~~~~~~~~~~~~~l~l~~~l~g~~~~~~~~~ 328 (418)
T TIGR00889 250 VKNASIWMSLSQFSEIFFILTIPFFLKR-FGIKKVMLLSLVAWALRFGFFAYGDPEYFGYALLFLSMIVYGCAFDFFNIS 328 (418)
T ss_pred hhhHHHHHHHHHHHHHHHHHHHHHHHHH-hCcHHHHHHHHHHHHHHHHHHHHcCcchhhHHHHHHHHHHHHHHHHHHHHH
Confidence 4677999999999999999999999999 9999999999999988877766632 3466788899999999988888
Q ss_pred hheeeEeeecCcchhhHHhHHH-HHHHHHHHHHHHHH-HhccC------CchHHHHHHHHHHHHHHHhHhheeecCCc
Q 041759 190 TIVLLTEKVGTEWRGLVGILDS-FFFTIGTLTLPAIA-YTNRS------SSWTIIYLWTSIPTLVYSGLLYIFVSESP 259 (525)
Q Consensus 190 ~~~~i~~~~~~~~r~~~~~~~~-~~~~~G~~l~~~l~-~~~~~------~~wr~~f~~~~~~~~~~~~~~~~~lpesp 259 (525)
...++.|++|+++|+++.++.+ ...++|.++||.++ .+.+. +||+.+|.+.+++.++..++.++++||+.
T Consensus 329 ~~~~i~~~~p~~~~g~~~g~~~~~~~~lg~~iGp~l~G~l~~~~g~~~~~~~~~~f~~~~~~~~i~~~l~~~~~~~~~ 406 (418)
T TIGR00889 329 GSVFVEKEVPVHIRASAQGLFTLMCNGFGSLLGYILSGVMVEKMFAYGTFDWQTMWLFFAGYIAILAVLFMIFFKYSH 406 (418)
T ss_pred HHHHHHHHCCHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHhccccCCchHHHHHHHHHHHHHHHHHHHHHhCCcc
Confidence 8999999999999999999997 67889999999984 44443 57999999999988888877788888763
No 126
>PF01770 Folate_carrier: Reduced folate carrier; InterPro: IPR002666 The reduced folate carrier (a transmembrane glycoprotein) transports reduced folate into mammalian cells via the carrier mediated mechanism (as opposed to the receptor mediated mechanism) it also transports cytotoxic folate analogues used in chemotherapy [], such as methotrexate (MTX). Mammalian cells have an absolute requirement for exogenous folates which are needed for growth, and biosynthesis of macromolecules [].; GO: 0005542 folic acid binding, 0008518 reduced folate carrier activity, 0006810 transport, 0016020 membrane
Probab=99.45 E-value=2e-11 Score=116.10 Aligned_cols=346 Identities=11% Similarity=0.050 Sum_probs=210.9
Q ss_pred cceeec-cccccchhhhhh-hHHHHHHHHHHHhHHhhHhcccccCCchHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHH
Q 041759 101 LTIISE-WGLECSSAFIKG-LPAASHFTGCLLGIVFLATLADSSLGRKNLLFLSCLTMSVATSLTIFSNNLWIYSLLRFF 178 (525)
Q Consensus 101 ~~i~~~-~~~~~~s~~~~g-~~~s~~~lg~~~~~~~~G~l~dr~~Grk~~~~~~~~~~~i~~~~~~~~~~~~~l~~~r~l 178 (525)
|.+.+. .|+ +..|+. -+.-+..-.++...++...+.|. .|.|++++++.+...+..++..+.++.+.+-+..+.
T Consensus 28 ~yL~~~~kn~---T~~qv~~~i~Pv~tYSyl~~l~~vflltd~-l~Ykpviil~~~~~i~t~~lll~~~sv~~mq~~q~~ 103 (412)
T PF01770_consen 28 PYLTGPDKNF---TEEQVNNEIYPVWTYSYLAFLLPVFLLTDY-LRYKPVIILQALSYIITWLLLLFGTSVLAMQLMQFF 103 (412)
T ss_pred HHHcCCccCC---CHHHHHHhhhhHHHHHHHHHHHHHHHHHHH-hhhhHHHHHHHHHHHHHHHHHHHHCcHHHHHHHHHH
Confidence 344443 677 666554 56666777788888999999999 999999999999999999999999999999999999
Q ss_pred HhhcccchhhhhheeeEeeecCcchhhHHhHHHHHHHHHHHHHHHHHHhcc---CCchHHHHHHHHHHHHHHHhHhheee
Q 041759 179 SGISRATIGTCTIVLLTEKVGTEWRGLVGILDSFFFTIGTLTLPAIAYTNR---SSSWTIIYLWTSIPTLVYSGLLYIFV 255 (525)
Q Consensus 179 ~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~l~~~l~~~~~---~~~wr~~f~~~~~~~~~~~~~~~~~l 255 (525)
.|++.+. ..+..+|+-...|+++-.++.+...++.-+|..++.++|-++. ..+.+.++.+......+.+ +..+++
T Consensus 104 yg~~~a~-evay~sYiys~v~~~~yq~vts~~raa~l~g~~~s~~lgQllvs~~~~sy~~L~~isl~~~~~a~-~~~~fL 181 (412)
T PF01770_consen 104 YGLATAA-EVAYYSYIYSVVDKEHYQKVTSYTRAATLVGRFISSLLGQLLVSFGGVSYFQLNYISLASVSLAL-LIALFL 181 (412)
T ss_pred HHHHHHH-HHHHHHHheeecCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHH-HHHHHc
Confidence 9999984 7778899988899988899999999999999888888876543 4466777666665555555 566778
Q ss_pred cCCchHhhhcCCHHHHHHHHHhhCCCcCCccchhhhhhhc-cCCCCcc-ccccc----ccchhhhhhhhcchhHHHHHHH
Q 041759 256 SESPRWLFMQGRQEEAVEVIKSLSPIKDSNQLSLSLVSAV-SFGHEPA-ASSKE----SSFLSSIRELFVRRWALERTLA 329 (525)
Q Consensus 256 pesp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~-~~~~~----~~~~~~~~~l~~~~~~~~~~~~ 329 (525)
|..++-..-+++.++... .. +.+.+..++..+.. +..++++ ...+. ......+++..++|.+++..+.
T Consensus 182 P~~~~S~~f~r~~~~~~~-~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~y~~~~ll~WSlW 255 (412)
T PF01770_consen 182 PMPKRSLFFHRKPPAEQD-AN-----ESESDKMNESPESSSSTEKSPSTESSSRKSVLRLLWKDFKSCYSNPRLLLWSLW 255 (412)
T ss_pred CCCCcccceeccCccccc-cc-----cccccccccccccccccccCcccccchHHHHHHHHHHHHHHHhcCchHHHHHHH
Confidence 876542222222111000 00 00000000000000 0000000 00000 1112345666778876665555
Q ss_pred HHHHHHHHHHHHhhhhhccccc---CChhHHHHHHHHHhcccccccCchhHHHHHHHHHhhcChhHHHHHHHHH--HHHH
Q 041759 330 LMVPGFGIGVVYYGMTLGIENL---GFDIYLGVVFNALLEIPNLASTIPSFFLTFFLIQKWNRKSSLLVLFIIS--GICS 404 (525)
Q Consensus 330 ~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~d~~g~~~~~~~~~~~~--~~~~ 404 (525)
-.+...+...+.++...+.++. +.....++..-+...+ .+.++.+..|++..++.+..-+.++.... +..+
T Consensus 256 Wa~atcgy~qv~nYvQ~LW~~v~~~~~~~vYNG~VeA~~tl----lgA~~al~~g~v~~~w~~~~~l~l~~~S~l~a~~L 331 (412)
T PF01770_consen 256 WAFATCGYYQVINYVQSLWDTVPPSDNESVYNGAVEAASTL----LGAIAALLAGYVKVNWDRWGELALGVFSLLQAGLL 331 (412)
T ss_pred HHHHHhHHHHHHHHHHHHHHhcCCCCCCcccchHHHHHHHH----HHHHHHHHHhHhhcchHHHHHHHHHHHHHHHHHHH
Confidence 5555555544443333333332 2223334444444444 34467777888766666554444433333 3333
Q ss_pred HHHHHhccccccchhHHHHHHHHHHHHHHHHHHHHHhhhccccCcchhhhhhHHHHHHHHHHH
Q 041759 405 IMAVVANDISNAGKRMRIGLELASLFSAYIAYTVIFIYAIELFPTCVRNSATSIMRLAIIFAA 467 (525)
Q Consensus 405 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~r~~~~~~~~~~~~~g~ 467 (525)
+++....+ .+..++..++.........++...-++.....+.-|..+|+++++..+-+
T Consensus 332 ~lm~~t~~-----Iwv~Y~~yIif~~~y~fliTiA~~qIA~~l~~e~yaLVFGiNtf~Al~LQ 389 (412)
T PF01770_consen 332 FLMSFTGN-----IWVCYAGYIIFRSLYMFLITIASFQIAKNLSEERYALVFGINTFVALVLQ 389 (412)
T ss_pred HHHHHhhH-----HHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccceeeeeeeHHHHHHHHH
Confidence 33333322 34677777777777777777777777766667777888888776654433
No 127
>TIGR01299 synapt_SV2 synaptic vesicle protein SV2. This model describes a tightly conserved subfamily of the larger family of sugar (and other) transporters described by pfam model pfam00083. Members of this subfamily include closely related forms SV2A and SV2B of synaptic vesicle protein from vertebrates and a more distantly related homolog (below trusted cutoff) from Drosophila melanogaster. Members are predicted to have two sets of six transmembrane helices.
Probab=99.43 E-value=4.5e-13 Score=139.23 Aligned_cols=141 Identities=16% Similarity=-0.001 Sum_probs=121.8
Q ss_pred hhhHHHHHHHHHHHhHHhhHhcccccCCchHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHhhcccchhhhhheeeEe
Q 041759 117 KGLPAASHFTGCLLGIVFLATLADSSLGRKNLLFLSCLTMSVATSLTIFSNNLWIYSLLRFFSGISRATIGTCTIVLLTE 196 (525)
Q Consensus 117 ~g~~~s~~~lg~~~~~~~~G~l~dr~~Grk~~~~~~~~~~~i~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~ 196 (525)
..+...+..++.+++.++.|+++|| +|||++++++.++.+++.++.+++++...+++.+++.|++.++..+...++++|
T Consensus 597 ~~~~~~l~~l~~i~G~il~g~L~Dr-~GRr~~l~~~~~lsai~~ll~~~~~s~~~ll~~~~l~g~~~~~~~~~~~a~~aE 675 (742)
T TIGR01299 597 IYFVNFLGTLAVLPGNIVSALLMDK-IGRLRMLAGSMVLSCISCFFLSFGNSESAMIALLCLFGGLSIAAWNALDVLTVE 675 (742)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHH-hCCHHHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 4556677889999999999999999 999999999999999999999999988889999999999888889999999999
Q ss_pred eecCcchhhHHhHHHHHHHHHHHHHHHHHHhccCCchHHHHHHHHHHHHHHHhHhheeecCCc
Q 041759 197 KVGTEWRGLVGILDSFFFTIGTLTLPAIAYTNRSSSWTIIYLWTSIPTLVYSGLLYIFVSESP 259 (525)
Q Consensus 197 ~~~~~~r~~~~~~~~~~~~~G~~l~~~l~~~~~~~~wr~~f~~~~~~~~~~~~~~~~~lpesp 259 (525)
++|.+.|++++++..+...+|.+++|+++..+...+...+|++.++..++.. ++..++||+.
T Consensus 676 l~Pt~~Rgta~Gi~~~~~rlGaiigp~i~g~L~~~~~~~pf~i~a~~lll~~-ll~~~LPET~ 737 (742)
T TIGR01299 676 LYPSDKRATAFGFLNALCKAAAVLGILIFGSFVGITKAAPILFASAALACGG-LLALKLPDTR 737 (742)
T ss_pred HcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHH-HHHHhCCCCc
Confidence 9999999999999999999999999998543333356678888877777766 5555679874
No 128
>PRK15011 sugar efflux transporter B; Provisional
Probab=99.42 E-value=1.8e-12 Score=128.00 Aligned_cols=150 Identities=11% Similarity=0.140 Sum_probs=122.7
Q ss_pred ceeeccccccchhhhhhhHHHHHHHHHHHhHHhhHhcccccCCchHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHhh
Q 041759 102 TIISEWGLECSSAFIKGLPAASHFTGCLLGIVFLATLADSSLGRKNLLFLSCLTMSVATSLTIFSNNLWIYSLLRFFSGI 181 (525)
Q Consensus 102 ~i~~~~~~~~~s~~~~g~~~s~~~lg~~~~~~~~G~l~dr~~Grk~~~~~~~~~~~i~~~~~~~~~~~~~l~~~r~l~G~ 181 (525)
.+++++|+ +..+.+++.+...++..++.++.|+++|| +|||+.+..+.+...+......+.++.+.+++.+++.++
T Consensus 242 ~l~~~~~~---~~~~~g~~~~~~~~~~i~~~~~~G~l~dr-~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~ 317 (393)
T PRK15011 242 FIINELHL---PEKLAGVMMGTAAGLEIPTMLIAGYFAKR-LGKRFLMRVAAVAGVCFYAGMLMAHSPAILLGLQLLNAI 317 (393)
T ss_pred HHHHHcCC---CHHHHHHHHHHHHHHHHHHHHHHHHHHHH-hChHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHH
Confidence 34567888 88899998888888888899999999999 999998888777666665555667788888889999988
Q ss_pred cccchhhhhheeeEeeecCcchhhHHhHHHHHHHHHHHHHHHH-HHhccCCchHHHHHHHHHHHHHHHhHhheeecC
Q 041759 182 SRATIGTCTIVLLTEKVGTEWRGLVGILDSFFFTIGTLTLPAI-AYTNRSSSWTIIYLWTSIPTLVYSGLLYIFVSE 257 (525)
Q Consensus 182 ~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~l~~~l-~~~~~~~~wr~~f~~~~~~~~~~~~~~~~~lpe 257 (525)
+.+...+....+..|..|+ +|+++.++++....+|..+++.+ +.+.+..+|+..|++.+++.++.. +..+++||
T Consensus 318 ~~g~~~~~~~~~~~~~~p~-~~g~~~~~~~~~~~lg~~~g~~l~G~i~~~~g~~~~~~~~~~~~~~~~-~~~~~~~~ 392 (393)
T PRK15011 318 YIGILGGIGMLYFQDLMPG-QAGSATTLYTNTSRVGWIIAGSLAGIVAEIWNYHAVFWFALVMIIATL-FCLLRIKD 392 (393)
T ss_pred HHHHHHHHHHHHHHHhCCC-CcchHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHH-HHHHhhcC
Confidence 8887777777778888875 59999999999999999999998 555566799999998888887776 55555554
No 129
>TIGR00890 2A0111 Oxalate/Formate Antiporter.
Probab=99.41 E-value=1.5e-12 Score=127.88 Aligned_cols=145 Identities=13% Similarity=-0.008 Sum_probs=124.1
Q ss_pred ccceeeccccccchhhhhhhHHHHHHHHHHHhHHhhHhcccccCCchHHHHHHHHHHHHHHHHHHhhhhH--HHHHHHHH
Q 041759 100 ALTIISEWGLECSSAFIKGLPAASHFTGCLLGIVFLATLADSSLGRKNLLFLSCLTMSVATSLTIFSNNL--WIYSLLRF 177 (525)
Q Consensus 100 ~~~i~~~~~~~~~s~~~~g~~~s~~~lg~~~~~~~~G~l~dr~~Grk~~~~~~~~~~~i~~~~~~~~~~~--~~l~~~r~ 177 (525)
.+.+.++++. +..+.+++.+.+.++..++.++.|+++|| +|||+.+.++.++.+++.++..+.++. ..+++..+
T Consensus 228 ~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~g~l~dr-~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 303 (377)
T TIGR00890 228 YKPYGQSLGL---SDGFLVLAVSISSIFNGGGRPFLGALSDK-IGRQKTMSIVFGISAVGMAAMLFIPMLNDVLFLATVA 303 (377)
T ss_pred HHHHHHHcCC---CHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HhhhhhhhHHHHHHHHHHHHHHHcccchhHHHHHHHH
Confidence 3445577888 88889999999999999999999999999 999999999999999888887776643 34556678
Q ss_pred HHhhcccchhhhhheeeEeeecCcchhhHHhHHHHHHHHHHHHHHHH-HHhccCCchHHHHHHHHHHHHHHH
Q 041759 178 FSGISRATIGTCTIVLLTEKVGTEWRGLVGILDSFFFTIGTLTLPAI-AYTNRSSSWTIIYLWTSIPTLVYS 248 (525)
Q Consensus 178 l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~l~~~l-~~~~~~~~wr~~f~~~~~~~~~~~ 248 (525)
+.|++.+...+..+.++.|.+|+++|+++.++.+....+|..++|.+ +.+.+..||++.|.+.+++.++..
T Consensus 304 ~~g~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~~~~~~~g~l~~~~g~~~~f~~~~~~~~~~~ 375 (377)
T TIGR00890 304 LVFFTWGGTISLFPSLVSDIFGPANSAANYGFLYTAKAVAGIFGGLIASHALTEIGFEYTFIVTGAFALTSL 375 (377)
T ss_pred HHHHHhccchhccHHHHHHHhhhhhhhhHhHHHHHHHHHHHHHHHHHHHHHHhhhchhhHHHHHHHHHHHhc
Confidence 88998888888888889999999999999999999999999999988 666677899999999887777654
No 130
>cd06174 MFS The Major Facilitator Superfamily (MFS) is a large and diverse group of secondary transporters that includes uniporters, symporters, and antiporters. MFS proteins facilitate the transport across cytoplasmic or internal membranes of a variety of substrates including ions, sugar phosphates, drugs, neurotransmitters, nucleosides, amino acids, and peptides. They do so using the electrochemical potential of the transported substrates. Uniporters transport a single substrate, while symporters and antiporters transport two substrates in the same or in opposite directions, respectively, across membranes. MFS proteins are typically 400 to 600 amino acids in length, and the majority contain 12 transmembrane alpha helices (TMs) connected by hydrophilic loops. The N- and C-terminal halves of these proteins display weak similarity and may be the result of a gene duplication/fusion event. Based on kinetic studies and the structures of a few bacterial superfamily members, GlpT (glycerol-3
Probab=99.38 E-value=5e-12 Score=122.86 Aligned_cols=145 Identities=22% Similarity=0.239 Sum_probs=133.8
Q ss_pred ccceeecc-ccccchhhhhhhHHHHHHHHHHHhHHhhHhcccccCCchH-HHHHHHHHHHHHHHHHHhhhhHHHHHHHHH
Q 041759 100 ALTIISEW-GLECSSAFIKGLPAASHFTGCLLGIVFLATLADSSLGRKN-LLFLSCLTMSVATSLTIFSNNLWIYSLLRF 177 (525)
Q Consensus 100 ~~~i~~~~-~~~~~s~~~~g~~~s~~~lg~~~~~~~~G~l~dr~~Grk~-~~~~~~~~~~i~~~~~~~~~~~~~l~~~r~ 177 (525)
.|.+.++. |. ++.+.++..+...++..++.++.|++.|| +|||+ .+..+.++..++.++..+.++.+.+.+..+
T Consensus 198 ~~~~~~~~~~~---~~~~~~~~~~~~~~~~~i~~~~~~~~~~~-~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~ 273 (352)
T cd06174 198 LPLYLQEVLGL---SAAEAGLLLSLFGLGGILGALLGGLLSDR-LGRRRLLLLIGLLLAALGLLLLALAPSLALLLVALL 273 (352)
T ss_pred HHHHHHHhcCC---CHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHhhhHHHHHHHHHHHHHHHHHHHhccHHHHHHHHH
Confidence 45555554 88 89999999999999999999999999999 99999 999999999999999999999999999999
Q ss_pred HHhhcccchhhhhheeeEeeecCcchhhHHhHHHHHHHHHHHHHHHH-HHhccCCchHHHHHHHHHHHHHHH
Q 041759 178 FSGISRATIGTCTIVLLTEKVGTEWRGLVGILDSFFFTIGTLTLPAI-AYTNRSSSWTIIYLWTSIPTLVYS 248 (525)
Q Consensus 178 l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~l~~~l-~~~~~~~~wr~~f~~~~~~~~~~~ 248 (525)
+.|++.+...+...+++.|..|+++|++.+++.+....+|..+++.+ +.+.+..+|++.+.+.+++.++..
T Consensus 274 ~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~g~l~~~~~~~~~~~~~~~~~~i~~ 345 (352)
T cd06174 274 LLGFGLGFAFPALLTLASELAPPEARGTASGLFNTFGSLGGALGPLLAGLLLDTGGYGGVFLILAALALLAA 345 (352)
T ss_pred HHHHHHhccchhHHHHHHhhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccCcchHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999988 566667899999999999988877
No 131
>PRK05122 major facilitator superfamily transporter; Provisional
Probab=99.36 E-value=1.2e-11 Score=122.65 Aligned_cols=135 Identities=14% Similarity=0.132 Sum_probs=117.8
Q ss_pred hhhHHHHHHHHHHHhHHhhHhcccccCCchHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHhhcccchhhhhheeeEe
Q 041759 117 KGLPAASHFTGCLLGIVFLATLADSSLGRKNLLFLSCLTMSVATSLTIFSNNLWIYSLLRFFSGISRATIGTCTIVLLTE 196 (525)
Q Consensus 117 ~g~~~s~~~lg~~~~~~~~G~l~dr~~Grk~~~~~~~~~~~i~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~ 196 (525)
.++..+.+.++..++.++.|++.|| +|||+.+..+..+.+++.++..+.++.+.+++.+++.|++.+...+.....+.|
T Consensus 251 ~~~~~~~~~~~~~~~~~~~g~l~~r-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~G~~~~~~~~~~~~~~~~ 329 (399)
T PRK05122 251 AALALTLFGVAFVGARLLFGNLINR-LGGLRVAIVSLLVEILGLLLLWLAPSPWMALIGAALTGFGFSLVFPALGVEAVK 329 (399)
T ss_pred chHHHHHHHHHHHHHHHHHHHHHHH-hccHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHhHHHHHHHHHHHHHH
Confidence 4566778889999999999999999 999999999999889888888888898888999999999999888887777888
Q ss_pred eecCcchhhHHhHHHHHHHHHHHHHHHH-HHhccCCchHHHHHHHHHHHHHHHhHhh
Q 041759 197 KVGTEWRGLVGILDSFFFTIGTLTLPAI-AYTNRSSSWTIIYLWTSIPTLVYSGLLY 252 (525)
Q Consensus 197 ~~~~~~r~~~~~~~~~~~~~G~~l~~~l-~~~~~~~~wr~~f~~~~~~~~~~~~~~~ 252 (525)
..|+++|+++.++++....+|..+++.+ +.+.+..||++.|++.++..++..++.+
T Consensus 330 ~~~~~~~g~~~g~~~~~~~~g~~~~~~~~g~l~~~~g~~~~~~~~~~~~~~~~~~~~ 386 (399)
T PRK05122 330 RVPPQNRGAALGAYSVFLDLSLGITGPLAGLVASWFGYPSIFLAAALAALLGLALTW 386 (399)
T ss_pred hCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999887766 6676778999999998888877763433
No 132
>TIGR00899 2A0120 sugar efflux transporter. This family of proteins is an efflux system for lactose, glucose, aromatic glucosides and galactosides, cellobiose, maltose, a-methyl glucoside and other sugar compounds. They are found in both gram-negative and gram-postitive bacteria.
Probab=99.35 E-value=1.6e-11 Score=120.73 Aligned_cols=149 Identities=15% Similarity=0.238 Sum_probs=124.0
Q ss_pred eeeccccccchhhhhhhHHHHHHHHHHHhHHhhHhcccccCCchHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHhhc
Q 041759 103 IISEWGLECSSAFIKGLPAASHFTGCLLGIVFLATLADSSLGRKNLLFLSCLTMSVATSLTIFSNNLWIYSLLRFFSGIS 182 (525)
Q Consensus 103 i~~~~~~~~~s~~~~g~~~s~~~lg~~~~~~~~G~l~dr~~Grk~~~~~~~~~~~i~~~~~~~~~~~~~l~~~r~l~G~~ 182 (525)
+.+++|. ++.+.+++.+...+...++.++.|++.|| +|||+++.++.++..+..+...+.++.+.+++.+++.|++
T Consensus 226 ~~~~~g~---~~~~~g~~~~~~~~~~~~~~~~~g~l~~r-~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~ 301 (375)
T TIGR00899 226 IIHELGL---PDKLAGLMMGTAAGLEIPFMLLAGYLIKR-FGKRRLMLLAALAGVAFYTGLAADNSLWALLMLQLLNAIF 301 (375)
T ss_pred HHHHcCC---CHHHHHHHHHHHHHHHHHHHHhHHHHHHH-hcchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3567888 88899998888877888889999999999 9999999888877776666666778888888899999999
Q ss_pred ccchhhhhheeeEeeecCcchhhHHhHHHHHHHHHHHHHHHH-HHhccCCchHHHHHHHHHHHHHHHhHhheeecC
Q 041759 183 RATIGTCTIVLLTEKVGTEWRGLVGILDSFFFTIGTLTLPAI-AYTNRSSSWTIIYLWTSIPTLVYSGLLYIFVSE 257 (525)
Q Consensus 183 ~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~l~~~l-~~~~~~~~wr~~f~~~~~~~~~~~~~~~~~lpe 257 (525)
.+...+....++.|..|+ +++++.++.+....+|..++|.+ +.+.+..||+..|++.++..++.. +...+++|
T Consensus 302 ~g~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~g~~~g~~~~g~~~~~~g~~~~~~~~~~~~~~~~-~~~~~~~~ 375 (375)
T TIGR00899 302 IGILAGIGMLYFQDLMPG-RAGAATTLYTNTGRVGWIIAGSVGGILAERWSYHAVYWFAIVMLIVAL-FCLLLIKD 375 (375)
T ss_pred HHHHHHHHHHHHHHhCcc-hhhHHHHHHHHHHHHHHHHHHHHHHHHHHhccchhHHHHHHHHHHHHH-HHHheecC
Confidence 998888888888898875 56799999999999999999988 556677799999999998887777 44455543
No 133
>PRK12382 putative transporter; Provisional
Probab=99.35 E-value=9.4e-12 Score=123.04 Aligned_cols=136 Identities=15% Similarity=0.125 Sum_probs=119.4
Q ss_pred hhhHHHHHHHHHHHhHHhhHhcccccCCchHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHhhcccchhhhhheeeEe
Q 041759 117 KGLPAASHFTGCLLGIVFLATLADSSLGRKNLLFLSCLTMSVATSLTIFSNNLWIYSLLRFFSGISRATIGTCTIVLLTE 196 (525)
Q Consensus 117 ~g~~~s~~~lg~~~~~~~~G~l~dr~~Grk~~~~~~~~~~~i~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~ 196 (525)
.++..+.+.++..+++++.|++.|| +|||+.+..+..+.+++.++..+.++.+.+++.+++.|++.+...+...+.+.|
T Consensus 251 ~~~~~~~~~~~~~~~~~~~g~l~~r-~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~ 329 (392)
T PRK12382 251 AGFTLTAFGGAFVLMRVLFGWMPDR-FGGVKVAIVSLLVETVGLLLLWLAPTAWVALAGAALTGAGCSLIFPALGVEVVK 329 (392)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHh-cCCCeehHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHhHHHHHHHHHHH
Confidence 4566677888889999999999999 999999999999999998888888888888899999999999888888888889
Q ss_pred eecCcchhhHHhHHHHHHHHHHHHHHHH-HHhccCCchHHHHHHHHHHHHHHHhHhhe
Q 041759 197 KVGTEWRGLVGILDSFFFTIGTLTLPAI-AYTNRSSSWTIIYLWTSIPTLVYSGLLYI 253 (525)
Q Consensus 197 ~~~~~~r~~~~~~~~~~~~~G~~l~~~l-~~~~~~~~wr~~f~~~~~~~~~~~~~~~~ 253 (525)
.+|+++|+++.++++....+|..++|.+ +.+.+..||++.|.+.++..++..++.++
T Consensus 330 ~~~~~~~g~~~g~~~~~~~~g~~ig~~~~g~l~~~~g~~~~~~~~~~~~~~~~~~~~~ 387 (392)
T PRK12382 330 RVPSQVRGTALGGYAAFQDIAYGVSGPLAGMLATSFGYPSVFLAGAISAVLGIIVTIL 387 (392)
T ss_pred hcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCchHHHHHHHHHHHHHHHHHHh
Confidence 9999999999999999999999999988 66677789999999998888777644443
No 134
>PRK10489 enterobactin exporter EntS; Provisional
Probab=99.32 E-value=3e-11 Score=120.49 Aligned_cols=189 Identities=14% Similarity=0.080 Sum_probs=138.1
Q ss_pred hhhhhhcchhHHHHHHHHHHHHHHHHHHHhhhhhcccccCChhHHHHHHHHHhcccccccCchhHHHHHHHHHhhcChhH
Q 041759 313 SIRELFVRRWALERTLALMVPGFGIGVVYYGMTLGIENLGFDIYLGVVFNALLEIPNLASTIPSFFLTFFLIQKWNRKSS 392 (525)
Q Consensus 313 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~d~~g~~~~ 392 (525)
+++.+.+++.++..++..++..+........+|.+.++.+.+..+.+...+...+ +.+++.++.|++.||+|||+.
T Consensus 9 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~~~~~l----~~~~~~~~~G~l~dr~g~~~~ 84 (417)
T PRK10489 9 DLSLLKTHPAFRAVFIARFISIFGLGLLGVAVPVQIQMMTGSTLQVGLSVTLTGG----AMFIGLMVGGVLADRYDRKKL 84 (417)
T ss_pred HHHHHHhCCChhhHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHH----HHHHHHHhhHHHhhhcCCceE
Confidence 4555667787777666666777777777777888888888888888888887777 777899999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHhccccccchhHHHHHHHHHHHHHHHHHHHHHhhhccccCcchhhhhhHHHHHHHHHHHHHHHH
Q 041759 393 LLVLFIISGICSIMAVVANDISNAGKRMRIGLELASLFSAYIAYTVIFIYAIELFPTCVRNSATSIMRLAIIFAAIFSSV 472 (525)
Q Consensus 393 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~r~~~~~~~~~~~~~g~~~~p~ 472 (525)
+..+..+.+++.+.+.........+.....+..++.+++.+...+....+..|..|+++|+++.++.+....+|..++|.
T Consensus 85 l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~ 164 (417)
T PRK10489 85 ILLARGTCGLGFIGLALNAFLPEPSLLAIYLLGLWDGFFGSLGVTALLAATPALVGRENLMQAGAITMLTVRLGSVISPA 164 (417)
T ss_pred EEehHHHHHHHHHHHHHHHHcCCCcHHHHHHHHHHHHHHHHHHHHHHhhhhhhccCHHHHHHHHHHHHHHHhHHHHhHHH
Confidence 98887777766655432110000123355556666677777777888889999999999999999999999999999999
Q ss_pred HHhh--ccCchhHHHHHHHHHHHHHHHHHHhccCC
Q 041759 473 LVAA--GSNNEFVSYGVFGLVIICCGFFVICLPET 505 (525)
Q Consensus 473 i~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 505 (525)
+.+. ...++.+.+.+.++..++..++.+.+|+.
T Consensus 165 l~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 199 (417)
T PRK10489 165 LGGLLIAAGGVAWNYGLAAAGTFITLLPLLRLPAL 199 (417)
T ss_pred HHHHHHHHHhhHHHHHHHHHHHHHHHHHHHhCCCC
Confidence 9884 22345566666666555555555566654
No 135
>TIGR00892 2A0113 monocarboxylate transporter 1.
Probab=99.30 E-value=1.3e-11 Score=124.13 Aligned_cols=145 Identities=10% Similarity=0.061 Sum_probs=119.6
Q ss_pred ccceeeccccccchhhhhhhHHHHHHHHHHHhHHhhHhcccccC--CchHHHHH--HHHHHHHHHHHHHhhhhHHHHHHH
Q 041759 100 ALTIISEWGLECSSAFIKGLPAASHFTGCLLGIVFLATLADSSL--GRKNLLFL--SCLTMSVATSLTIFSNNLWIYSLL 175 (525)
Q Consensus 100 ~~~i~~~~~~~~~s~~~~g~~~s~~~lg~~~~~~~~G~l~dr~~--Grk~~~~~--~~~~~~i~~~~~~~~~~~~~l~~~ 175 (525)
+|.+.+++|. +..+.+++.++..++..+++++.|+++|| . ++|+...+ +.++.+++.++..+.++++.+++.
T Consensus 264 l~~~~~~~g~---s~~~~g~~~~~~~~~~~~~~~~~g~l~d~-~~~~~~~~~~~~~~~~~~~l~~ll~~~~~~~~~~~i~ 339 (455)
T TIGR00892 264 LVPYAKDKGV---DEYEAAFLLSIIGFVDIFARPSCGLIAGL-KWIRPHVQYLFSFALLFNGLTHLLCALAGDYTGLVIY 339 (455)
T ss_pred HHHHHHHcCC---CHHHHHHHHHHHHHHHHHHHHHHHHHhcc-cccCHHHHHHHHHHHHHHHHHHHHHHHhchHHHHHHH
Confidence 4556677888 99999999999999999999999999997 4 33433333 344445556666778899999999
Q ss_pred HHHHhhcccchhhhhheeeEeeecCcchhhHHhHHHHHHHHHHHHHHHH-HHhccCC-chHHHHHHHHHHHHHHH
Q 041759 176 RFFSGISRATIGTCTIVLLTEKVGTEWRGLVGILDSFFFTIGTLTLPAI-AYTNRSS-SWTIIYLWTSIPTLVYS 248 (525)
Q Consensus 176 r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~l~~~l-~~~~~~~-~wr~~f~~~~~~~~~~~ 248 (525)
+++.|++.+...+...+++.|.+|++++++..++++....+|.++||.+ +.+.+.. +|++.|++.+++.++..
T Consensus 340 ~~~~G~~~g~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~lg~~igp~i~G~l~~~~g~~~~~f~~~~~~~li~~ 414 (455)
T TIGR00892 340 CIFFGLSFGSVGALLFEVLMDLVGAQRFSSAVGLVTIVECCAVLIGPPLAGRLVDATKNYKYIFYASGSIVVSAG 414 (455)
T ss_pred HHHHHHHhchHHHHHHHHHHHHhhHHHHhhHHhHHHHHHHHHHHccccceeeeehhcCCcchHHHHhhHHHHHHH
Confidence 9999999999999999999999999999999999999999999999998 4455555 59999999888776655
No 136
>TIGR00900 2A0121 H+ Antiporter protein.
Probab=99.29 E-value=6.2e-11 Score=115.89 Aligned_cols=170 Identities=8% Similarity=-0.047 Sum_probs=129.1
Q ss_pred HHHHHHHHHHHHHHhhhhhcccccCChhHHHHHHHHHhcccccccCchhHHHHHHHHHhhcChhHHHHHHHHHHHHHHHH
Q 041759 328 LALMVPGFGIGVVYYGMTLGIENLGFDIYLGVVFNALLEIPNLASTIPSFFLTFFLIQKWNRKSSLLVLFIISGICSIMA 407 (525)
Q Consensus 328 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~d~~g~~~~~~~~~~~~~~~~~~~ 407 (525)
...++..+........+|.+..+.+.+..+.+...+...+ +.+++.++.|++.||+|||+.+..+..+..++.++.
T Consensus 6 ~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~~~~~~----~~~i~~~~~G~l~dr~g~r~~~~~~~~~~~~~~~~~ 81 (365)
T TIGR00900 6 AAQLISLIGTAITQVALPLYVLAGTGSASVLSLAALAGML----PYVVLSPIAGALADRYDRKKVMIGADLIRAVLVAVL 81 (365)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhccHHHHHHHHHHHHH----HHHHHHHhhhHHHHhhchhHHHHHHHHHHHHHHHHH
Confidence 3444455555666667777888888888888888887777 777899999999999999999999988887777766
Q ss_pred HHhccccccchhHHHHHHHHHHHHHHHHHHHHHhhhccccCcchhhhhhHHHHHHHHHHHHHHHHHHhh--ccCchhHHH
Q 041759 408 VVANDISNAGKRMRIGLELASLFSAYIAYTVIFIYAIELFPTCVRNSATSIMRLAIIFAAIFSSVLVAA--GSNNEFVSY 485 (525)
Q Consensus 408 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~r~~~~~~~~~~~~~g~~~~p~i~~~--~~~~~~~~~ 485 (525)
.........+....++..++.+++.+...+...++..|.+|+++|++..++.+....+|.+++|.+.+. ...++...+
T Consensus 82 ~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~l~~~l~~~~g~~~~~ 161 (365)
T TIGR00900 82 PFVALLGGLNIWQVYVLAGILAIAQAFFTPAYQAMLPDLVPEEQLTQANSLSQAVRSLFYIVGPGIGGLMYATLGIKWAI 161 (365)
T ss_pred HHHHHcCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHhhHHHHH
Confidence 665421111244666777788888888889999999999999999999999999999999999999874 233456666
Q ss_pred HHHHHHHHHHHHHHHh
Q 041759 486 GVFGLVIICCGFFVIC 501 (525)
Q Consensus 486 ~~~~~~~~~~~~~~~~ 501 (525)
.+.++..++..++.+.
T Consensus 162 ~~~~~~~~~~~~~~~~ 177 (365)
T TIGR00900 162 WVDAVGFAISALLIVS 177 (365)
T ss_pred HHHHHHHHHHHHHHHh
Confidence 6666555555444433
No 137
>PRK03545 putative arabinose transporter; Provisional
Probab=99.29 E-value=8.3e-11 Score=116.14 Aligned_cols=149 Identities=19% Similarity=0.109 Sum_probs=119.5
Q ss_pred cceeeccccccchhhhhhhHHHHHHHHHHHhHHhhHhcccccCCchHHHHHHHHHHHHHH-HHHHhhhhHHHHHHHHHHH
Q 041759 101 LTIISEWGLECSSAFIKGLPAASHFTGCLLGIVFLATLADSSLGRKNLLFLSCLTMSVAT-SLTIFSNNLWIYSLLRFFS 179 (525)
Q Consensus 101 ~~i~~~~~~~~~s~~~~g~~~s~~~lg~~~~~~~~G~l~dr~~Grk~~~~~~~~~~~i~~-~~~~~~~~~~~l~~~r~l~ 179 (525)
|.+++++|. +..+.+++.+.+.++..+++++.|+++|| +|||++. .+..+..++. ++..+.++.+.+++..++.
T Consensus 230 ~~l~~~~g~---s~~~~~~~~~~~~~~~~~g~~~~g~l~dr-~~~~~~~-~~~~~~~~~~~~l~~~~~~~~~~~~~~~l~ 304 (390)
T PRK03545 230 PFVQQVAGL---SENFATLLLLLFGGAGIIGSVLFSRLGNR-HPSGFLL-IAIALLLVCLLLLLPAANSEWHLSVLSIFW 304 (390)
T ss_pred HHHHHhcCC---CccHHHHHHHHHHHHHHHHHHHHHHHhhc-cchhHHH-HHHHHHHHHHHHHHHHhchHHHHHHHHHHH
Confidence 344556788 88899999999999999999999999999 9988754 4444444443 3345567888888899999
Q ss_pred hhcccchhhhhheeeEeeecCcchhhHHhHHHHHHHHHHHHHHHH-HHhccCCchHHHHHHHHHHHHHHHhHhheee
Q 041759 180 GISRATIGTCTIVLLTEKVGTEWRGLVGILDSFFFTIGTLTLPAI-AYTNRSSSWTIIYLWTSIPTLVYSGLLYIFV 255 (525)
Q Consensus 180 G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~l~~~l-~~~~~~~~wr~~f~~~~~~~~~~~~~~~~~l 255 (525)
|++.+...+...+.+.+..| ++|++++++++....+|..+||++ +.+.+..|++..|++.+++.++..+..+...
T Consensus 305 g~~~~~~~~~~~~~~~~~~~-~~~~~~~g~~~~~~~~g~~~G~~~~G~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~ 380 (390)
T PRK03545 305 GIAIMCIGLAMQVKVLKLAP-DATDVAMALFSGIFNIGIGAGALLGNQVSLHLGLSSIGYVGAALALAALVWSILIF 380 (390)
T ss_pred HHHHhcchHHHHHHHHHhCC-CcHHHHHHHHHHHHHHHHHHHHHHHHHHHhccChhHHHHHHHHHHHHHHHHHHHHc
Confidence 99988777777777778766 688999999999999999999998 6677889999999999988887774554443
No 138
>TIGR00902 2A0127 phenyl proprionate permease family protein. This family of proteins is involved in the uptake of 3-phenylpropionic acid. This uptake mechanism is for the metabolism of phenylpropanoid compounds and plays an important role in the natural degradative cycle of these aromatic molecules.
Probab=99.29 E-value=5.9e-11 Score=116.73 Aligned_cols=143 Identities=11% Similarity=0.032 Sum_probs=125.7
Q ss_pred ccceeeccccccchhhhhhhHHHHHHHHHHHhHHhhHhcccccCCchHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHH
Q 041759 100 ALTIISEWGLECSSAFIKGLPAASHFTGCLLGIVFLATLADSSLGRKNLLFLSCLTMSVATSLTIFSNNLWIYSLLRFFS 179 (525)
Q Consensus 100 ~~~i~~~~~~~~~s~~~~g~~~s~~~lg~~~~~~~~G~l~dr~~Grk~~~~~~~~~~~i~~~~~~~~~~~~~l~~~r~l~ 179 (525)
.|...+|+|. +..+.|++.+...++..++.++.|++.|| +|+|+.+.++.++.++..++.+++++.+.+++.++++
T Consensus 228 ~~~~l~~~g~---s~~~~g~l~~~~~~~~i~~~~~~~~l~~r-~g~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~q~l~ 303 (382)
T TIGR00902 228 SAIYWQAAGI---SASATGLLWGIGVLAEIIIFAFSNKLFQN-CSARDLLLISAIACVGRWAIIGAIEAFPLIFLLQILH 303 (382)
T ss_pred HHHHHHHCCC---CHhHHHHHHHHHHHHHHHHHHHhHHHHhh-CCHHHHHHHHHHHHHHHHHHHHhHhhHHHHHHHHHHH
Confidence 3444467899 99999999999999999999999999999 9999999999999999999999999999999999999
Q ss_pred hhcccchhhhhheeeEeeecCcchhhHHhHHH-HHHHHHHHHHHHH-HHhccCCchHHHHHHHHHHHHHHH
Q 041759 180 GISRATIGTCTIVLLTEKVGTEWRGLVGILDS-FFFTIGTLTLPAI-AYTNRSSSWTIIYLWTSIPTLVYS 248 (525)
Q Consensus 180 G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~-~~~~~G~~l~~~l-~~~~~~~~wr~~f~~~~~~~~~~~ 248 (525)
|++.+...+....++.+. |+++|++..++++ ...++|.++++.+ |.+.+..|+ ..|++.++++++..
T Consensus 304 g~~~~~~~~~~~~~i~~~-~~~~~~~~q~~~~~~~~g~g~~~g~~~~G~l~~~~g~-~~~~~~~~~~~~~~ 372 (382)
T TIGR00902 304 CGTFAVCHLAAMRYIAAQ-PGSEIAKLQALYNALAMGGLIAIFTAFAGFIYPTLGA-GTFVFMAIIAAAAF 372 (382)
T ss_pred HHHHHHHHHHHHHHHHhC-CHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccH-HHHHHHHHHHHHHH
Confidence 999999999999999988 8899999999876 5778999999999 555566676 66777777776654
No 139
>PRK10054 putative transporter; Provisional
Probab=99.29 E-value=1.6e-10 Score=114.08 Aligned_cols=173 Identities=10% Similarity=0.006 Sum_probs=125.1
Q ss_pred HHHHHHHHHHHHHHHHHHhhhhhcc-cccCChhHHHHHHHHHhcccccccCchhHHHHHHHHHhhcChhHHHHHHHHHHH
Q 041759 324 LERTLALMVPGFGIGVVYYGMTLGI-ENLGFDIYLGVVFNALLEIPNLASTIPSFFLTFFLIQKWNRKSSLLVLFIISGI 402 (525)
Q Consensus 324 ~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~d~~g~~~~~~~~~~~~~~ 402 (525)
+...+..++...+.......++.++ +++|.+..+.+...+...+ +.+++.++.|+++||+|||+.+.++.++..+
T Consensus 10 ~~l~~~~~~~~~g~~~~~~~l~~~l~~~~g~s~~~~g~~~s~~~~----~~~~~~~~~G~l~Dr~g~k~~~~~~~~~~~~ 85 (395)
T PRK10054 10 SALLASSLLLTIGRGATLPFMTIYLSRQYSLSVDLIGYAMTIALT----IGVVFSLGFGILADKFDKKRYMLLAITAFAS 85 (395)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHH----HHHHHHHHHHHHHhhcCcchhHHHHHHHHHH
Confidence 4444445555555555555555544 5689999998888887777 6778899999999999999999998888888
Q ss_pred HHHHHHHhccccccchhHHHHHHHHHHHHHHHHHHHHHhhhccccCcchhhhhhHHHHHHHHHHHHHHHHHHhh-ccCch
Q 041759 403 CSIMAVVANDISNAGKRMRIGLELASLFSAYIAYTVIFIYAIELFPTCVRNSATSIMRLAIIFAAIFSSVLVAA-GSNNE 481 (525)
Q Consensus 403 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~r~~~~~~~~~~~~~g~~~~p~i~~~-~~~~~ 481 (525)
+.+++.+.++. + ..++...+.+.+.+...+....+..|..|++.|+++.++.+....+|..++|.+.+. ...++
T Consensus 86 ~~~~~~~~~~~----~-~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~lg~~igp~l~~~l~~~g~ 160 (395)
T PRK10054 86 GFIAIPLVNNV----T-LVVLFFALINCAYSVFSTVLKAWFADNLSSTSKTKIFSLNYTMLNIGWTVGPPLGTLLVMQSI 160 (395)
T ss_pred HHHHHHHHhHH----H-HHHHHHHHHHHHHHHHHHHHHHHHHHhcCHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcc
Confidence 77776665443 2 333344445555556667788899999999999999999999999999999999885 23356
Q ss_pred hHHHHHHHHHHHHHHHHH-HhccCC
Q 041759 482 FVSYGVFGLVIICCGFFV-ICLPET 505 (525)
Q Consensus 482 ~~~~~~~~~~~~~~~~~~-~~~~~~ 505 (525)
...|.+.+++.++..++. +++++.
T Consensus 161 ~~~f~~~~~~~~i~~i~~~~~~~~~ 185 (395)
T PRK10054 161 NLPFWLAAICSAFPLVFIQIWVQRS 185 (395)
T ss_pred CcHHHHHHHHHHHHHHHHHHHHhcc
Confidence 667777766666654433 334443
No 140
>PRK09874 drug efflux system protein MdtG; Provisional
Probab=99.28 E-value=2.9e-11 Score=120.26 Aligned_cols=137 Identities=20% Similarity=0.234 Sum_probs=120.4
Q ss_pred hhhhHHHHHHHHHHHhHHhhHhcccccCCchHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHhhcccchhhhhheeeE
Q 041759 116 IKGLPAASHFTGCLLGIVFLATLADSSLGRKNLLFLSCLTMSVATSLTIFSNNLWIYSLLRFFSGISRATIGTCTIVLLT 195 (525)
Q Consensus 116 ~~g~~~s~~~lg~~~~~~~~G~l~dr~~Grk~~~~~~~~~~~i~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~ 195 (525)
..+.+.+++.++..++.++.|+++|| +|||+.+..+..+.+++.+...+.++.+.+++.+++.|++.+...+...+++.
T Consensus 259 ~~g~~~~~~~l~~~~~~~~~g~l~dr-~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~ 337 (408)
T PRK09874 259 ISGMIASVPGVAALLSAPRLGKLGDR-IGPEKILITALIFSVLLLIPMSFVQTPLQLGILRFLLGAADGALLPAVQTLLV 337 (408)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhc-cccchhHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHhhhHhhHHHHHHHHH
Confidence 45677778888999999999999999 99999999999888888888888888899999999999999999998888888
Q ss_pred eeecCcchhhHHhHHHHHHHHHHHHHHHH-HHhccCCchHHHHHHHHHHHHHHHhHhhe
Q 041759 196 EKVGTEWRGLVGILDSFFFTIGTLTLPAI-AYTNRSSSWTIIYLWTSIPTLVYSGLLYI 253 (525)
Q Consensus 196 ~~~~~~~r~~~~~~~~~~~~~G~~l~~~l-~~~~~~~~wr~~f~~~~~~~~~~~~~~~~ 253 (525)
+..|+++|++.+++.+....+|..+||.+ +.+.+..||++.|++.+++.++..+..++
T Consensus 338 ~~~~~~~~g~~~~~~~~~~~~g~~~gp~~~G~l~~~~g~~~~f~~~~~~~l~~~~~~~~ 396 (408)
T PRK09874 338 YNSSNQIAGRIFSYNQSFRDIGNVTGPLMGAAISANYGFRAVFLVTAGVVLFNAVYSWN 396 (408)
T ss_pred HhCCcccceeeehHHHHHHHHHHHhhHHHHHHHHhhcchhHHHHHHHHHHHHHHHHHHH
Confidence 88899999999999999999999999999 55667789999999999888887744443
No 141
>PRK11551 putative 3-hydroxyphenylpropionic transporter MhpT; Provisional
Probab=99.27 E-value=4.1e-11 Score=119.14 Aligned_cols=145 Identities=17% Similarity=0.066 Sum_probs=122.2
Q ss_pred ccceeeccccccchhhhhhhHHHHHHHHHHHhHHhhHhcccccCCchHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHH
Q 041759 100 ALTIISEWGLECSSAFIKGLPAASHFTGCLLGIVFLATLADSSLGRKNLLFLSCLTMSVATSLTIFSNNLWIYSLLRFFS 179 (525)
Q Consensus 100 ~~~i~~~~~~~~~s~~~~g~~~s~~~lg~~~~~~~~G~l~dr~~Grk~~~~~~~~~~~i~~~~~~~~~~~~~l~~~r~l~ 179 (525)
.|.+.++.|. +..+.+++.+.+.++..++.++.|+++|| +|||+.+..+.+..+++.++..+.++.+.+.+..++.
T Consensus 243 ~p~~~~~~g~---s~~~~~~~~~~~~~~~~~~~~~~g~l~dr-~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 318 (406)
T PRK11551 243 LPSLLVGQGL---SRSQAGLVQIAFNIGGALGSLLIGALMDR-LRPRRVVLLIYAGILASLAALAAAPSFAGMLLAGFAA 318 (406)
T ss_pred HHHHHHhCCC---ChhhhhHHHHHHHHHHHHHHHHHHHHHHH-HhHHHHHHHHHHHHHHHHHHHHhcCcHHHHHHHHHHH
Confidence 4556667788 88999999999999999999999999999 9999999888777777777777778888888888899
Q ss_pred hhcccchhhhhheeeEeeecCcchhhHHhHHHHHHHHHHHHHHHH-HHhccC-CchHHHHHHHHHHHHHHH
Q 041759 180 GISRATIGTCTIVLLTEKVGTEWRGLVGILDSFFFTIGTLTLPAI-AYTNRS-SSWTIIYLWTSIPTLVYS 248 (525)
Q Consensus 180 G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~l~~~l-~~~~~~-~~wr~~f~~~~~~~~~~~ 248 (525)
|++.+...+...+++.|.+|+++|++..++.+....+|..++|.+ +.+.+. .+|...++......++..
T Consensus 319 g~~~~~~~~~~~~~~~~~~p~~~~g~~~g~~~~~~~~g~~~g~~~~g~l~~~~~~~~~~~~~~~~~~~~~~ 389 (406)
T PRK11551 319 GLFVVGGQSVLYALAPLFYPTQVRGTGVGAAVAVGRLGSMAGPLLAGQLLALGRSTVGVIGASIPVILVAA 389 (406)
T ss_pred HHHHHhHHHHHHHHHHHHcchhhhhhhhhHHHHhhhHHHHHHhhhHhhhhccCCchHHHHHHHHHHHHHHH
Confidence 998888888888999999999999999999999999999999998 454443 356666766666655555
No 142
>PF05631 DUF791: Protein of unknown function (DUF791); InterPro: IPR008509 This family consists of several eukaryotic proteins of unknown function.
Probab=99.26 E-value=3e-10 Score=105.14 Aligned_cols=151 Identities=19% Similarity=0.167 Sum_probs=110.5
Q ss_pred ceeeccccccchhhhhhhHHHHHHHHHHHhHHhhHhcccccCCchHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHhh
Q 041759 102 TIISEWGLECSSAFIKGLPAASHFTGCLLGIVFLATLADSSLGRKNLLFLSCLTMSVATSLTIFSNNLWIYSLLRFFSGI 181 (525)
Q Consensus 102 ~i~~~~~~~~~s~~~~g~~~s~~~lg~~~~~~~~G~l~dr~~Grk~~~~~~~~~~~i~~~~~~~~~~~~~l~~~r~l~G~ 181 (525)
.+.+++|. ++.+++.+....+...++...+.|.++|| +|||+.-++.+++.+++++. -..++++.++++|++.|+
T Consensus 59 ~LY~~yg~---~~~qIa~Lf~~Gf~Ss~i~g~~~G~laD~-~Grk~~cl~~cily~~scl~-k~~~~~~~L~~GRvlgGi 133 (354)
T PF05631_consen 59 ALYESYGF---SEHQIAILFVAGFASSAIFGTFVGSLADR-YGRKKACLLFCILYSLSCLT-KHSSNYPVLLLGRVLGGI 133 (354)
T ss_pred HHHHHcCC---CHHHHHHHHHHHHHHHHHHHHHHHHHHHh-cCchHHHHHHHHHHHHHHHH-HhccccHHHHHHHHHHHH
Confidence 34468999 99999999999999999999999999999 99999999999999999964 455899999999999999
Q ss_pred cccchhhhhheee-Eee----ecCcchhhHHhHHH-HHHHHHHHHHHHHHHh-ccC--CchHHHHHHHHHHHHHHHhHhh
Q 041759 182 SRATIGTCTIVLL-TEK----VGTEWRGLVGILDS-FFFTIGTLTLPAIAYT-NRS--SSWTIIYLWTSIPTLVYSGLLY 252 (525)
Q Consensus 182 ~~~~~~~~~~~~i-~~~----~~~~~r~~~~~~~~-~~~~~G~~l~~~l~~~-~~~--~~wr~~f~~~~~~~~~~~~~~~ 252 (525)
+......+..++. .|. +|++..+..++... ...++-.+++.+++-. .+. .|-..+|....++.++..+++.
T Consensus 134 aTSLLfS~FEsW~V~Eh~~~g~~~~~L~~tF~~~tf~~n~~vAI~aGv~a~~l~~~~~~g~vaPF~~a~~~l~~~~~~I~ 213 (354)
T PF05631_consen 134 ATSLLFSAFESWMVHEHNKRGFPQEWLSDTFSLATFFGNGVVAIGAGVVANVLADWFGFGPVAPFDAAIVLLAVAAVLIL 213 (354)
T ss_pred HHHHHHHHHHHHHHHHHHHcCCChHHHHHHHHHHHHHHhHHHHHHHhHHHHHHHHHhCCCCcchHHHHHHHHHHHHHHHH
Confidence 9999999888764 343 23333344444333 2233333444444433 332 3457888888877777764444
Q ss_pred eeecC
Q 041759 253 IFVSE 257 (525)
Q Consensus 253 ~~lpe 257 (525)
..-+|
T Consensus 214 ~~W~E 218 (354)
T PF05631_consen 214 KTWPE 218 (354)
T ss_pred hcccc
Confidence 43444
No 143
>PF07690 MFS_1: Major Facilitator Superfamily; InterPro: IPR011701 Among the different families of transporter, only two occur ubiquitously in all classifications of organisms. These are the ATP-Binding Cassette (ABC) superfamily and the Major Facilitator Superfamily (MFS). The MFS transporters are single-polypeptide secondary carriers capable only of transporting small solutes in response to chemiosmotic ion gradients [, ].; GO: 0055085 transmembrane transport, 0016021 integral to membrane; PDB: 2GFP_B 3O7P_A 3O7Q_A 1PW4_A.
Probab=99.26 E-value=1.7e-10 Score=112.26 Aligned_cols=159 Identities=11% Similarity=0.139 Sum_probs=126.5
Q ss_pred HHHHHHHHHHHhhhh-hcccccCChhHHHHHHHHHhcccccccCchhHHHHHHHHHhhcChhHHHHHHHHHHHHHHHHHH
Q 041759 331 MVPGFGIGVVYYGMT-LGIENLGFDIYLGVVFNALLEIPNLASTIPSFFLTFFLIQKWNRKSSLLVLFIISGICSIMAVV 409 (525)
Q Consensus 331 ~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~d~~g~~~~~~~~~~~~~~~~~~~~~ 409 (525)
++..+.........+ .+.+++|.+..+.+...+...+ +..++.++.|++.||+|||+.+.++.++.+++.++..+
T Consensus 6 ~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~----~~~~~~~~~g~l~dr~g~r~~l~~~~~~~~~~~~~~~~ 81 (352)
T PF07690_consen 6 FLSGFGFSIISPALPLYLAEELGLSPSQIGLLFSAFFL----GSALFSPFAGYLSDRFGRRRVLIIGLLLFALGSLLLAF 81 (352)
T ss_dssp HHHHHHHHHHHHHHH-HHHCCSTTTSHCHHHHHHHHHH----HHHHHHHHHHHHHHHS-HHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHccCCCHHHHHHHHHHHHH----HHHHHHHHHHHHHHHcCCeeeEeehhhhhhhHHHHhhh
Confidence 333444444555556 6678889888888888887777 77799999999999999999999999999988555544
Q ss_pred hccccccchhHHHHHHHHHHHHHHHHHHHHHhhhccccCcchhhhhhHHHHHHHHHHHHHHHHHHhhcc--CchhHHHHH
Q 041759 410 ANDISNAGKRMRIGLELASLFSAYIAYTVIFIYAIELFPTCVRNSATSIMRLAIIFAAIFSSVLVAAGS--NNEFVSYGV 487 (525)
Q Consensus 410 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~r~~~~~~~~~~~~~g~~~~p~i~~~~~--~~~~~~~~~ 487 (525)
..+. + ..++..++.+++.+...+....++.|.+|+++|+++.++......+|..++|.+.+... .++...+.+
T Consensus 82 ~~~~----~-~~~~~~~l~g~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~g~~~g~~l~~~l~~~~~~~~~~~~ 156 (352)
T PF07690_consen 82 ASNF----W-LLLIARFLLGIGSGFFSPASNALIADWFPPEERGRAFGILSAGFSLGSILGPLLGGFLISYFGWRWAFLI 156 (352)
T ss_dssp HCCH----H-HHHHHHHHHHHHHHHHHHHHHHHHHHCCCTCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHCHHCCHHHH
T ss_pred hhhH----H-HHhhhccccccccccccccccccccccchhhhhhhccccccchhhhhhhcccchhhhhhhcccccccccc
Confidence 3332 4 77888889999999999999999999999999999999999999999999999998533 346667888
Q ss_pred HHHHHHHHHHH
Q 041759 488 FGLVIICCGFF 498 (525)
Q Consensus 488 ~~~~~~~~~~~ 498 (525)
.+++.++..++
T Consensus 157 ~~~~~~~~~il 167 (352)
T PF07690_consen 157 SAILSLIAAIL 167 (352)
T ss_dssp HHHHHHHHHHH
T ss_pred ccchhhhhhhh
Confidence 87777776653
No 144
>PRK03633 putative MFS family transporter protein; Provisional
Probab=99.24 E-value=1.4e-10 Score=114.21 Aligned_cols=142 Identities=18% Similarity=0.183 Sum_probs=116.9
Q ss_pred ccceeeccccccchhhhhhhHHHHHHHHHHHhHHhhHhcccccCCchHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHH
Q 041759 100 ALTIISEWGLECSSAFIKGLPAASHFTGCLLGIVFLATLADSSLGRKNLLFLSCLTMSVATSLTIFSNNLWIYSLLRFFS 179 (525)
Q Consensus 100 ~~~i~~~~~~~~~s~~~~g~~~s~~~lg~~~~~~~~G~l~dr~~Grk~~~~~~~~~~~i~~~~~~~~~~~~~l~~~r~l~ 179 (525)
+|.+.++.|. +..+.|+..+...++..+++++.|++.|| +|||+++..+.++.+++.+... . .......+++.
T Consensus 223 lp~~~~~~g~---s~~~~g~~~~~~~~~~~~~~~~~g~l~dr-~~~~~~l~~~~~~~~~~~~~~~--~-~~~~~~~~~l~ 295 (381)
T PRK03633 223 MPLYLNHQGM---SDASIGFWMALLVSAGILGQWPIGRLADR-FGRLLVLRVQVFVVILGSIAML--S-QAAMAPALFIL 295 (381)
T ss_pred HHHHHHHcCC---CHHHHHHHHHHHHHHHHHHHhhhHHHHHH-cCcHHHHHHHHHHHHHHHHHHh--h-hHHHHHHHHHH
Confidence 3445556688 88899999999999999999999999999 9999999988888877665443 2 23444567788
Q ss_pred hhcccchhhhhheeeEeeecCcchhhHHhHHHHHHHHHHHHHHHH-HHhccCCchHHHHHHHHHHHHHHH
Q 041759 180 GISRATIGTCTIVLLTEKVGTEWRGLVGILDSFFFTIGTLTLPAI-AYTNRSSSWTIIYLWTSIPTLVYS 248 (525)
Q Consensus 180 G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~l~~~l-~~~~~~~~wr~~f~~~~~~~~~~~ 248 (525)
|++.....|...+++.|..|+++++...+.+....++|.++||.+ +.+.+..+|++.|.+.+...++..
T Consensus 296 g~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~lG~~igp~~~G~l~~~~g~~~~f~~~~~~~l~~~ 365 (381)
T PRK03633 296 GAAGFTLYPVAMAWACEKVEHHELVAMNQALLLSYTVGSLLGPSFTAMLMQNYSDNLLFIMIASVSFIYL 365 (381)
T ss_pred HHHHHhHHHHHHHHHHccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCccHHHHHHHHHHHHHH
Confidence 888777889998989999988888888888888999999999988 666677899999999888887665
No 145
>TIGR00879 SP MFS transporter, sugar porter (SP) family. This model represent the sugar porter subfamily of the major facilitator superfamily (pfam00083)
Probab=99.24 E-value=4.9e-11 Score=121.28 Aligned_cols=156 Identities=13% Similarity=0.063 Sum_probs=122.0
Q ss_pred ccceeeccccccchhhhhhhHHHHHHHHHHHhHHhhHhcccccCCchHHHHHHHHHHHHHHHHHHhh-----h------h
Q 041759 100 ALTIISEWGLECSSAFIKGLPAASHFTGCLLGIVFLATLADSSLGRKNLLFLSCLTMSVATSLTIFS-----N------N 168 (525)
Q Consensus 100 ~~~i~~~~~~~~~s~~~~g~~~s~~~lg~~~~~~~~G~l~dr~~Grk~~~~~~~~~~~i~~~~~~~~-----~------~ 168 (525)
.|.+.+++|. +..+.++......++..++.++.|+++|| +|||+.+.++.++.+++.++.++. + +
T Consensus 307 ~~~~~~~~g~---~~~~~~~~~~~~~~~~~~~~~~~g~l~d~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 382 (481)
T TIGR00879 307 SPTIFENAGV---STDHAFLVSIIVGAVNFAFTFVAIFLVDR-FGRRPLLLIGAAGMAICLFVLGILGASFVTGSSKSSG 382 (481)
T ss_pred HHHHHHHcCC---CchHHHHHHHHHHHHHHHHHHHHHHHHHH-hcchHHHHHHHHHHHHHHHHHHHHhhcccCCcccchh
Confidence 5667778888 77888999999999999999999999999 999999999988888877776621 1 2
Q ss_pred HHHHHHHHHHHhhcccchhhhhheeeEeeecCcchhhHHhHHHHHHHHHHHHHHHH-HHhccCCchHHHHHHHHHHHHHH
Q 041759 169 LWIYSLLRFFSGISRATIGTCTIVLLTEKVGTEWRGLVGILDSFFFTIGTLTLPAI-AYTNRSSSWTIIYLWTSIPTLVY 247 (525)
Q Consensus 169 ~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~l~~~l-~~~~~~~~wr~~f~~~~~~~~~~ 247 (525)
...+....++.+.......+....++.|.+|+++|+++.++.+....+|.+++|.+ +.+.+..+|++.|++.++++++.
T Consensus 383 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~lg~~i~~~~~~~~~~~~~~~~~f~~~~~~~~~~ 462 (481)
T TIGR00879 383 NVAIVFILLFIAFFAMGWGPVPWVIVSEIFPLSLRPKGISIAVAANWLANFIVGFLFPTMLESIGVGGVFIFFGGLNVLG 462 (481)
T ss_pred HHHHHHHHHHHHHHHccccCeehhhhhccCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCccceehhHHHHHHHH
Confidence 33333333333332233446666778999999999999999999999999999987 66666779999999999888887
Q ss_pred HhHhheeecCCc
Q 041759 248 SGLLYIFVSESP 259 (525)
Q Consensus 248 ~~~~~~~lpesp 259 (525)
.++..++.||++
T Consensus 463 ~i~~~~~~~~~~ 474 (481)
T TIGR00879 463 LIFVYFFLPETK 474 (481)
T ss_pred HHHHheecccCC
Confidence 766667778754
No 146
>PRK10077 xylE D-xylose transporter XylE; Provisional
Probab=99.23 E-value=1.1e-10 Score=118.66 Aligned_cols=156 Identities=19% Similarity=0.078 Sum_probs=118.4
Q ss_pred ccceeeccccccchhhhhhhHHHHHHHHHHHhHHhhHhcccccCCchHHHHHHHHHHHHHHHHHHhhh--hH--HHHHHH
Q 041759 100 ALTIISEWGLECSSAFIKGLPAASHFTGCLLGIVFLATLADSSLGRKNLLFLSCLTMSVATSLTIFSN--NL--WIYSLL 175 (525)
Q Consensus 100 ~~~i~~~~~~~~~s~~~~g~~~s~~~lg~~~~~~~~G~l~dr~~Grk~~~~~~~~~~~i~~~~~~~~~--~~--~~l~~~ 175 (525)
.|.+.+++|. +....++......++..++.++.|+++|| +|||++++.+.++.+++.++.+... +. .....+
T Consensus 294 ~p~i~~~~g~---~~~~~~~~~~~~~~~~~i~~~~~g~l~dr-~g~r~~~i~~~~~~~v~~~~l~~~~~~~~~~~~~~~~ 369 (479)
T PRK10077 294 APEIFKTLGA---STDIALLQTIIVGVINLTFTVLAIMTVDK-FGRKPLQIIGALGMAIGMFSLGTAFYTQAPGIVALLS 369 (479)
T ss_pred HHHHHHHcCC---CCchHHHHHHHHHHHHHHHHHHHHHHHHH-hcChHHHHHhHHHHHHHHHHHHHHHhcCcccHHHHHH
Confidence 5777778888 76667777777888899999999999999 9999999999999988887765432 21 122333
Q ss_pred HHHHhhcccc-hhhhhheeeEeeecCcchhhHHhHHHHHHHHHHHHHHHHH-------HhccCCchHHHHHHHHHHHHHH
Q 041759 176 RFFSGISRAT-IGTCTIVLLTEKVGTEWRGLVGILDSFFFTIGTLTLPAIA-------YTNRSSSWTIIYLWTSIPTLVY 247 (525)
Q Consensus 176 r~l~G~~~~~-~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~l~~~l~-------~~~~~~~wr~~f~~~~~~~~~~ 247 (525)
.++.+++.+. ..+....++.|.+|+++|++++++......+|.++++.+. +..+..+|++.|++.++..++.
T Consensus 370 ~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~g~~~~~~~~g~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 449 (479)
T PRK10077 370 MLFYVAAFAMSWGPVCWVLLSEIFPNAIRGKALAIAVAAQWIANYFVSWTFPMMDKNSWLVAHFHNGFSYWIYGCMGVLA 449 (479)
T ss_pred HHHHHHHHhccccchhHHHhHhhCChhHHHHHHHHHHHHHHHHHHHHHHHhHHHHhccchhhhccCccHHHHHHHHHHHH
Confidence 4444444433 2366788899999999999999999999999998876552 2234678999999988887777
Q ss_pred HhHhheeecCCc
Q 041759 248 SGLLYIFVSESP 259 (525)
Q Consensus 248 ~~~~~~~lpesp 259 (525)
.++.+++.||+.
T Consensus 450 ~~~~~~~~~e~~ 461 (479)
T PRK10077 450 ALFMWKFVPETK 461 (479)
T ss_pred HHHHHhccccCC
Confidence 756667788864
No 147
>TIGR02332 HpaX 4-hydroxyphenylacetate permease. This protein is a part of the Major Facilitator Superfamily (Pfam family pfam07690). Member of this family are found in a number of proteobacterial genomes, but only in the context of having genes for 4-hydroxyphenylacetate (4-HPA) degradation. The protein is characterized by Prieto, et al. (PubMed:9315705) as 4-hydroxyphenylacetate permease in E. coli, where 3-HPA and 3,4-dihydroxyphenylacetate are shown to competitively inhibit 4-HPA transport and therefore also interact specificially.
Probab=99.23 E-value=3.8e-10 Score=112.07 Aligned_cols=159 Identities=12% Similarity=0.080 Sum_probs=127.1
Q ss_pred HHhhhhhcccccCChhHHHHHHHHHhcccccccCchhHHHHHHHHHhhcChhHHHHHHHHHHHHHHHHHHhccccccchh
Q 041759 340 VYYGMTLGIENLGFDIYLGVVFNALLEIPNLASTIPSFFLTFFLIQKWNRKSSLLVLFIISGICSIMAVVANDISNAGKR 419 (525)
Q Consensus 340 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~d~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 419 (525)
..+..+.+.++++.+..+.+...+...+ +..++.+..|++.||+|||+++..+.++..++.++..+.++. .
T Consensus 27 ~~~~~~~l~~~~~~s~~~~g~~~s~~~~----~~~~~~~~~g~l~dr~G~r~~~~~~~~~~~~~~~~~~~~~~~-----~ 97 (412)
T TIGR02332 27 IGFAGLTMGKDLGLSATMFGLAATLFYA----AYVICGIPSNIMLAIIGARRWIAGIMVLWGIASTATMFATGP-----E 97 (412)
T ss_pred HHHHHHhhHhhcCCCHHHHHHHHHHHHH----HHHHHHhhHHHHHHHhChHHHHHHHHHHHHHHHHHHHHhcCH-----H
Confidence 3445566778899999998888888877 777899999999999999999999999999888888775444 4
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhhccccCcchhhhhhHHHHHHHHHHHHHHHHHHhhc--------cCchhHHHHHHHHH
Q 041759 420 MRIGLELASLFSAYIAYTVIFIYAIELFPTCVRNSATSIMRLAIIFAAIFSSVLVAAG--------SNNEFVSYGVFGLV 491 (525)
Q Consensus 420 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~r~~~~~~~~~~~~~g~~~~p~i~~~~--------~~~~~~~~~~~~~~ 491 (525)
..++.-++.+++.+...+....++.|.+|+++|+++.++.+....+|..++|.+.+.. ..++...|.+.++.
T Consensus 98 ~l~~~r~l~G~~~~~~~~~~~~~~~~~~~~~~rg~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~~~~gwr~~f~~~~~~ 177 (412)
T TIGR02332 98 SLYLLRILVGIAEAGFLPGILLYLTFWFPAYFRARANALFMIAMPVTMALGLILSGYILALDGLMALKGWQWLFLLEGFP 177 (412)
T ss_pred HHHHHHHHHHHHHhhHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCCccchhHHHHHHHHH
Confidence 5667778888998888888888999999999999999999999999999999887742 13677788777666
Q ss_pred HHHHHH-HHHhccCCCC
Q 041759 492 IICCGF-FVICLPETRG 507 (525)
Q Consensus 492 ~~~~~~-~~~~~~~~~~ 507 (525)
.++..+ ..+++||+++
T Consensus 178 ~l~~~~~~~~~~~~~p~ 194 (412)
T TIGR02332 178 SVILGVMTWFWLDDSPD 194 (412)
T ss_pred HHHHHHHHhhccCCCcc
Confidence 555443 4455676553
No 148
>KOG3762 consensus Predicted transporter [General function prediction only]
Probab=99.23 E-value=4.5e-10 Score=107.87 Aligned_cols=177 Identities=17% Similarity=0.195 Sum_probs=135.7
Q ss_pred hhhhcchhHHHHHHHHHHHHHHHHHHHhhhhhcccccCChhHHHHHHHHHhcccccccCchhHHHHHHHHHhhcChhHHH
Q 041759 315 RELFVRRWALERTLALMVPGFGIGVVYYGMTLGIENLGFDIYLGVVFNALLEIPNLASTIPSFFLTFFLIQKWNRKSSLL 394 (525)
Q Consensus 315 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~d~~g~~~~~~ 394 (525)
.+++.++.....++..++..++...+++.+-..+++++......+ ...+.+.++-++..++.+++++|+|+-+++.
T Consensus 365 ~~~~~s~~~llff~~av~mG~g~~lv~tFLfWHled~~~~~~LfG----v~~a~~~~gEI~~~ffs~klI~kiGHv~v~~ 440 (618)
T KOG3762|consen 365 GKVFASPHILLFFFVAVVMGAGVGLVFTFLFWHLEDLGGIKTLFG----VVSALCHAGEILFYFFSFKLIEKIGHVNVMY 440 (618)
T ss_pred HHHhcCCCEEehhHHHHHHHHHHHHHHHHHHHHHhhcCCcceeee----ehhhhhccchHHHHHHHHHHHHHhcccceee
Confidence 356777776666666666677777777777777788775544443 3333334477899999999999999999999
Q ss_pred HHHHHHHHHHHHHHHhccccccchhHHHHHHHHHHHHHHHHHHHHHhhhccccCcchhhhhhHHHHHHH-HHHHHHHHHH
Q 041759 395 VLFIISGICSIMAVVANDISNAGKRMRIGLELASLFSAYIAYTVIFIYAIELFPTCVRNSATSIMRLAI-IFAAIFSSVL 473 (525)
Q Consensus 395 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~r~~~~~~~~~~~-~~g~~~~p~i 473 (525)
+++.+..+-++.+....+. |..+..-++.+...+..|....+|+....|++.++++.++..... .+|-.+|.++
T Consensus 441 lgLa~~~~Rf~~~S~L~n~-----W~vLPieilqgit~aliWaa~~sY~s~vaPp~l~at~Q~l~~g~f~GlG~g~GslI 515 (618)
T KOG3762|consen 441 LGLACNVGRFLYYSYLQNP-----WMVLPIEILQGITHALIWAAIISYASHVAPPGLRATAQGLLQGIFHGLGKGLGSLI 515 (618)
T ss_pred ehhhHHHHHHHHHHHhcCc-----hheeeHHHHHHHHHHHHHHHHHHHHHhhCCCcchHHHHHHHHHHhcccCcchhhhh
Confidence 9999999888888777655 477788899999999999999999999999999999999998776 6666677777
Q ss_pred Hhh--ccCchhHHHHHHHHHHHHHHHHHH
Q 041759 474 VAA--GSNNEFVSYGVFGLVIICCGFFVI 500 (525)
Q Consensus 474 ~~~--~~~~~~~~~~~~~~~~~~~~~~~~ 500 (525)
.|. ...+....|.++++.+++..++..
T Consensus 516 GG~~v~~fg~~ttf~~~giAcl~~l~~~~ 544 (618)
T KOG3762|consen 516 GGFVVERFGARTTFRIFGIACLVTLALFI 544 (618)
T ss_pred hhhhheeehhHHHHHHHHHHHHHHHHHHH
Confidence 763 334667778887777766555443
No 149
>PRK10473 multidrug efflux system protein MdtL; Provisional
Probab=99.23 E-value=5.7e-10 Score=110.30 Aligned_cols=167 Identities=13% Similarity=0.048 Sum_probs=126.1
Q ss_pred HHHHHHHHHHhhhhhcccccCChhHHHHHHHHHhcccccccCchhHHHHHHHHHhhcChhHHHHHHHHHHHHHHHHHHhc
Q 041759 332 VPGFGIGVVYYGMTLGIENLGFDIYLGVVFNALLEIPNLASTIPSFFLTFFLIQKWNRKSSLLVLFIISGICSIMAVVAN 411 (525)
Q Consensus 332 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~d~~g~~~~~~~~~~~~~~~~~~~~~~~ 411 (525)
....+.......+|.+.+++|.+....+...+...+ +.+++.++.|+++||+|||+.+..+..+..++.++....+
T Consensus 14 ~~~~~~~~~~~~lp~~~~~~~~s~~~~~~~~~~~~~----~~~~~~~~~G~l~Dr~g~r~~l~~~~~~~~i~~~~~~~~~ 89 (392)
T PRK10473 14 LYPAGIDMYLVGLPRIAADLNASEAQLHIAFSVYLA----GMAAAMLFAGKIADRSGRKPVAIPGAALFIIASLLCSLAE 89 (392)
T ss_pred HHHHHHHHHhhhHHHHHHHhCCCHHHHHHHHHHHHH----HHHHHHHhHhHHHHHhCChHHHHHHHHHHHHHHHHHHHhC
Confidence 333344444456677788889988888877777776 7778899999999999999999999988888887776654
Q ss_pred cccccchhHHHHHHHHHHHHHHHHHHHHHhhhccccCcchhhhhhHHHHHHHHHHHHHHHHHHhh--ccCchhHHHHHHH
Q 041759 412 DISNAGKRMRIGLELASLFSAYIAYTVIFIYAIELFPTCVRNSATSIMRLAIIFAAIFSSVLVAA--GSNNEFVSYGVFG 489 (525)
Q Consensus 412 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~r~~~~~~~~~~~~~g~~~~p~i~~~--~~~~~~~~~~~~~ 489 (525)
+. ...++..++.+++.+..++....++.|.+|+++|+++.++.+....++..++|.+.+. ...++...+.+.+
T Consensus 90 ~~-----~~~~~~~~l~g~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~i~~~~~~~i~~~l~~~~g~~~~~~~~~ 164 (392)
T PRK10473 90 TS-----SLFLAGRFLQGIGAGCCYVVAFAILRDTLDDRRRAKVLSLLNGITCIIPVLAPVLGHLIMLKFPWQSLFYTMA 164 (392)
T ss_pred cH-----HHHHHHHHHHHhhhhHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcChHHHHHHHH
Confidence 33 3455566677777777788889999999999999999999999999999999988874 2345666677776
Q ss_pred HHHHHHHHH-HHhccCCCC
Q 041759 490 LVIICCGFF-VICLPETRG 507 (525)
Q Consensus 490 ~~~~~~~~~-~~~~~~~~~ 507 (525)
++.++..++ .+.++|+++
T Consensus 165 ~~~~i~~~~~~~~~~~~~~ 183 (392)
T PRK10473 165 AMGILVLLLSLFILKETRP 183 (392)
T ss_pred HHHHHHHHHHHHHcCCCCC
Confidence 665555443 345566543
No 150
>KOG3098 consensus Uncharacterized conserved protein [Function unknown]
Probab=99.22 E-value=6.1e-09 Score=101.02 Aligned_cols=311 Identities=13% Similarity=0.067 Sum_probs=189.5
Q ss_pred HHHHHHHHHHhHHhhHhcccccCCchHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHhhcccchhhhhheeeEeeecC
Q 041759 121 AASHFTGCLLGIVFLATLADSSLGRKNLLFLSCLTMSVATSLTIFSNNLWIYSLLRFFSGISRATIGTCTIVLLTEKVGT 200 (525)
Q Consensus 121 ~s~~~lg~~~~~~~~G~l~dr~~Grk~~~~~~~~~~~i~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~ 200 (525)
.++.+....+++++.+.+.|+ .|.|..+.++...+..-.+...+ .|-+.+++.-.+.|+|.+..+..--.|++|..++
T Consensus 56 ~aiiY~~ftv~~l~~psiv~~-i~~K~~lv~ga~~y~~f~~gfl~-~N~y~~yfssallG~Gaallw~GqG~ylt~~st~ 133 (461)
T KOG3098|consen 56 QAIIYAFFTVSCLFAPSIVNF-LGPKWALVIGATCYAAFPLGFLF-PNSYYLYFSSALLGFGAALLWTGQGGYLTSNSTR 133 (461)
T ss_pred HHHHHHHHHHHHHhhHHHHHH-hhHHHHHHHHhHHHHHHHHHHHh-cchHHHHHHHHHhhhhHHheecccceehhhcCCh
Confidence 677788888999999999999 99999999999999887776655 5677888999999999999999999999999999
Q ss_pred cchhhHHhHHHHHHHHHHHHHHHHHHhcc---------CCch--------------HHHHHHHHHHHHHHHhHhheeecC
Q 041759 201 EWRGLVGILDSFFFTIGTLTLPAIAYTNR---------SSSW--------------TIIYLWTSIPTLVYSGLLYIFVSE 257 (525)
Q Consensus 201 ~~r~~~~~~~~~~~~~G~~l~~~l~~~~~---------~~~w--------------r~~f~~~~~~~~~~~~~~~~~lpe 257 (525)
+.+.+-.++.......+.++|..+-.... ..+- +..+.+...+..+.. +...+.|.
T Consensus 134 ~tie~Nisi~Wai~~~~li~Ggi~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~v~~~~~~l~~-i~~~~~p~ 212 (461)
T KOG3098|consen 134 ETIERNISIFWAIGQSSLIIGGIILFIYFQFSSSSAIITDGTRRLVFEVLFIDFEIKVLFGVLLAISVLSI-INFDFLPS 212 (461)
T ss_pred hhHHHHHHHHHHHHHHHHHhhhHhheeeeEecccccccccchhhhhcchhhhhHHHHHHHHHHHHHHHHHh-hheeecCc
Confidence 99999999999999999998876633321 1111 111111111111211 22223332
Q ss_pred CchHhhhcCCHHHHHHHHHhhCCCcCCccchhhhhhhccCCCCcccccccccchhhhhhhhcchhHHHHHHHHHHHHHHH
Q 041759 258 SPRWLFMQGRQEEAVEVIKSLSPIKDSNQLSLSLVSAVSFGHEPAASSKESSFLSSIRELFVRRWALERTLALMVPGFGI 337 (525)
Q Consensus 258 sp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~ 337 (525)
.. . ..+.+. . +... ........+++++|+........+..++..
T Consensus 213 ~~-~------~~~~~~--------~-~~~~--------------------~~~l~~~~~l~~~~~ml~L~~~f~~tG~~~ 256 (461)
T KOG3098|consen 213 KD-V------VNCKSS--------S-ETSF--------------------SELLKLTFKLLKTPKMLLLFPFFFYTGLET 256 (461)
T ss_pred cc-h------hhhhhh--------c-cccH--------------------HHHHHHHHHHhcCHhHHHHHHHHHHHHHHH
Confidence 11 0 000000 0 0000 000123445667776444444333333322
Q ss_pred HHHHhhhhhcc--c-ccCCh-hHHHHHHHHHhcccccccCchhHHHHHHHHHh---hcChhHHHHHHHHHHHHHHHHHHh
Q 041759 338 GVVYYGMTLGI--E-NLGFD-IYLGVVFNALLEIPNLASTIPSFFLTFFLIQK---WNRKSSLLVLFIISGICSIMAVVA 410 (525)
Q Consensus 338 ~~~~~~~~~~~--~-~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~d~---~g~~~~~~~~~~~~~~~~~~~~~~ 410 (525)
.+..-..|..+ . ..+.+ ....++..-..++ +.+.+....+.+.+| +|+++.+.++..+..+..++....
T Consensus 257 Sf~~~iypt~i~ft~~~~~n~~~~~ai~~~~~g~----g~v~~g~~~~~l~~rir~fg~~~~~~~~~~~~~~~~~li~l~ 332 (461)
T KOG3098|consen 257 SFWISIYPTCISFTRKLGSNTTYLIAIYSIGIGL----GEVIGGLDFSILSKRIRGFGRKPTVLIGIIIHLIGFLLIHLS 332 (461)
T ss_pred HHHHhccchhhhhhhhccCcchhHHHHHHHHHhH----HHHHHHHHHHHHhhhhhhcccCcchhHHHHHHHHHHHHHhcc
Confidence 22111112111 1 22222 2222222222223 555777777777765 578888888888777777666544
Q ss_pred cccc-------------ccchhHHHHHHHHHHHHHHHHHHHHHhhhccccCcchhhhhhHHHHHHHHHHHHHHHHHHh
Q 041759 411 NDIS-------------NAGKRMRIGLELASLFSAYIAYTVIFIYAIELFPTCVRNSATSIMRLAIIFAAIFSSVLVA 475 (525)
Q Consensus 411 ~~~~-------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~r~~~~~~~~~~~~~g~~~~p~i~~ 475 (525)
.... +.......+..++.|++-.......+.++...+| +.|..+.++...-..+++.++-+...
T Consensus 333 ~p~dap~~~t~~~~~~~~~~~~~~~ii~~l~G~~D~~~~t~~~~ii~~~~~-~~~~~~fsi~kfyq~~~s~v~~f~~~ 409 (461)
T KOG3098|consen 333 FPNDAPLRPTDSPPLLFTPSYYLALIIGFLLGFGDACFNTQRYVIIALLYP-DDRAQAFSLFKFYQSVASCVAFFFSP 409 (461)
T ss_pred ccccCCCCCCcccccccccchhHHHHHHHHHhhHHHHHHHHHHHHHHHHhc-CchHHHHHHHHHHHHHHHHHHhhhhh
Confidence 2210 1123466777778888888888888889999985 55788888877777666665544443
No 151
>PRK09556 uhpT sugar phosphate antiporter; Reviewed
Probab=99.22 E-value=9.1e-11 Score=118.62 Aligned_cols=143 Identities=14% Similarity=0.052 Sum_probs=109.7
Q ss_pred ceeeccccccchhhhhhhHHHHHHHHHHHhHHhhHhcccccCCchHHHHHHHHHHHHHHHH--HHhhhhHHHHHHHHHHH
Q 041759 102 TIISEWGLECSSAFIKGLPAASHFTGCLLGIVFLATLADSSLGRKNLLFLSCLTMSVATSL--TIFSNNLWIYSLLRFFS 179 (525)
Q Consensus 102 ~i~~~~~~~~~s~~~~g~~~s~~~lg~~~~~~~~G~l~dr~~Grk~~~~~~~~~~~i~~~~--~~~~~~~~~l~~~r~l~ 179 (525)
.+++++|+ +..+.++..+.+.++..++.+++|+++|| +|||+.+.....+..++..+ ....++.+.+.+.+++.
T Consensus 284 yl~~~~g~---s~~~a~~~~~~~~~~~~ig~~~~G~lsDr-~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 359 (467)
T PRK09556 284 YAFQELGF---SKEDAINTFTLFEIGALVGSLLWGWLSDL-ANGRRALVACIALALIIFTLGVYQHATSEYMYLASLFAL 359 (467)
T ss_pred HHHHccCC---CHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HCCCchHHHHHHHHHHHHHHHHHHhcCcHHHHHHHHHHH
Confidence 45577899 99999999999999999999999999999 99998776655444443322 22345677777888888
Q ss_pred hhcccchhhhhheeeEeeecCcchhhHHhHHHHHHHH-HHHHHHHH-HHhcc------------CCchHHHHHHHHHHHH
Q 041759 180 GISRATIGTCTIVLLTEKVGTEWRGLVGILDSFFFTI-GTLTLPAI-AYTNR------------SSSWTIIYLWTSIPTL 245 (525)
Q Consensus 180 G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~-G~~l~~~l-~~~~~------------~~~wr~~f~~~~~~~~ 245 (525)
|++.............|.+|++.|+++.++.+....+ |..++|.+ |.+.+ ..+|+..|++..+..+
T Consensus 360 G~~~~~~~~~~~~~~~~~~p~~~~g~a~gi~~~~g~l~g~~~~~~~~G~i~~~~~~g~~~~~~~~~~~~~~f~~~~~~~~ 439 (467)
T PRK09556 360 GFLVFGPQLLIGVAAVGFVPKKAIGVANGIKGTFAYLFGDSFAKVGLGMIADPTKNGTPIFGYTLTGWAGTFAALDIAAI 439 (467)
T ss_pred HHHHhhHHHHHHHHHHhhcchhhHHHHHHHHHHHHHHHhHHHHhhhHHHHhcccccccccccccccChHHHHHHHHHHHH
Confidence 8654433333335566999999999999999988886 76788776 77777 5689999988877777
Q ss_pred HHH
Q 041759 246 VYS 248 (525)
Q Consensus 246 ~~~ 248 (525)
+..
T Consensus 440 ~~~ 442 (467)
T PRK09556 440 GCI 442 (467)
T ss_pred HHH
Confidence 665
No 152
>PRK11663 regulatory protein UhpC; Provisional
Probab=99.22 E-value=3.7e-10 Score=113.08 Aligned_cols=156 Identities=15% Similarity=0.089 Sum_probs=122.3
Q ss_pred HhhhhhcccccCChhHHHHHHHHHhcccccccCchhHHHHHHHHHhhcChhHHHHHHHHHHHHHHHHHHhccccccchhH
Q 041759 341 YYGMTLGIENLGFDIYLGVVFNALLEIPNLASTIPSFFLTFFLIQKWNRKSSLLVLFIISGICSIMAVVANDISNAGKRM 420 (525)
Q Consensus 341 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~d~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 420 (525)
....|.+.+++|.+..+.+.+.+...+ +..++.++.|++.||+|||+.+.++.++.+++.++..+..+. ..
T Consensus 43 ~~~~~~~~~~~g~s~~~~g~~~~~~~~----~~~~~~~~~G~l~dr~g~r~~~~~~~~~~~~~~~~~~~~~~~-----~~ 113 (434)
T PRK11663 43 NAAMPEMLADLGLSRSDIGLLATLFYI----TYGVSKFVSGIVSDRSNARYFMGIGLIATGIINILFGFSSSL-----WA 113 (434)
T ss_pred HHhhHHHHHhcCCCHHHHHHHHHHHHH----HHHHHHhhhhHHHhhcCCchhHHHHHHHHHHHHHHHHHHhHH-----HH
Confidence 445677788899998888888887777 777899999999999999999999999998888877665443 34
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhhccccCcchhhhhhHHHHHHHHHHHHHHHHHHhh--ccCchhHHHHHHHHHHHHHHH-
Q 041759 421 RIGLELASLFSAYIAYTVIFIYAIELFPTCVRNSATSIMRLAIIFAAIFSSVLVAA--GSNNEFVSYGVFGLVIICCGF- 497 (525)
Q Consensus 421 ~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~r~~~~~~~~~~~~~g~~~~p~i~~~--~~~~~~~~~~~~~~~~~~~~~- 497 (525)
..+..++.+++.+..++....++.|.+|+++|++++++.+....+|..++|.+.+. ...++...|.+.+++.++..+
T Consensus 114 l~~~~~l~g~~~g~~~~~~~~~~~~~~~~~~rg~~~~~~~~~~~~g~~~~~~~~~~l~~~~gw~~~f~~~~i~~~~~~~~ 193 (434)
T PRK11663 114 FALLWVLNAFFQGWGWPVCAKLLTAWYSRTERGGWWAIWNTAHNVGGALIPLVVGAIALHYGWRYGMMIAGIIAIVVGLF 193 (434)
T ss_pred HHHHHHHHHHHHHccchHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHH
Confidence 45555667777777788888999999999999999999999999999999988874 334667777776665554433
Q ss_pred HHHhccCC
Q 041759 498 FVICLPET 505 (525)
Q Consensus 498 ~~~~~~~~ 505 (525)
..++++|+
T Consensus 194 ~~~~~~~~ 201 (434)
T PRK11663 194 LCWRLRDK 201 (434)
T ss_pred HHHHcCCC
Confidence 33445543
No 153
>PRK10213 nepI ribonucleoside transporter; Reviewed
Probab=99.21 E-value=1e-09 Score=108.21 Aligned_cols=153 Identities=12% Similarity=0.107 Sum_probs=121.6
Q ss_pred hhhcccccCChhHHHHHHHHHhcccccccCchhHHHHHHHHHhhcChhHHHHHHHHHHHHHHHHHHhccccccchhHHHH
Q 041759 344 MTLGIENLGFDIYLGVVFNALLEIPNLASTIPSFFLTFFLIQKWNRKSSLLVLFIISGICSIMAVVANDISNAGKRMRIG 423 (525)
Q Consensus 344 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~d~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 423 (525)
+|.+.+++|.+..+.+...+...+ +..++.++.|++.||+|||+.+..+.++.+++.++..+.++. +..++
T Consensus 43 l~~~~~~~g~s~~~~g~~~~~~~~----~~~~~~~~~g~l~Dr~grr~~~~~~~~~~~~~~~~~~~~~~~-----~~l~~ 113 (394)
T PRK10213 43 LTPMAQDLGISEGVAGQSVTVTAF----VAMFASLFITQTIQATDRRYVVILFAVLLTLSCLLVSFANSF-----SLLLI 113 (394)
T ss_pred HHHHHHHcCCCHHHHHHHHHHHHH----HHHHHHHHHHHHhcccCcHHHHHHHHHHHHHHHHHHHHHChH-----HHHHH
Confidence 455667889998888887777776 777899999999999999999999999999888777665433 46677
Q ss_pred HHHHHHHHHHHHHHHHHhhhccccCcchhhhhhHHHHHHHHHHHHHHHHHHhh--ccCchhHHHHHHHHHHHHHHHHH-H
Q 041759 424 LELASLFSAYIAYTVIFIYAIELFPTCVRNSATSIMRLAIIFAAIFSSVLVAA--GSNNEFVSYGVFGLVIICCGFFV-I 500 (525)
Q Consensus 424 ~~~~~~~~~~~~~~~~~~~~~~~~p~~~r~~~~~~~~~~~~~g~~~~p~i~~~--~~~~~~~~~~~~~~~~~~~~~~~-~ 500 (525)
..++.+++.+...+....++.|.+|+++|+.+.++......+|..++|.+.+. ...++...|.+.+++.++..+.. .
T Consensus 114 ~r~l~G~~~g~~~~~~~~~i~~~~~~~~~~~a~~~~~~~~~~g~~ig~~l~~~l~~~~gw~~~f~~~~~l~~~~~l~~~~ 193 (394)
T PRK10213 114 GRACLGLALGGFWAMSASLTMRLVPPRTVPKALSVIFGAVSIALVIAAPLGSFLGELIGWRNVFNAAAVMGVLCIFWIIK 193 (394)
T ss_pred HHHHHHHhhHHHHHHHHHHHHHHcCHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHHHHH
Confidence 77888888888889999999999999999999999999999999999999884 23456677777666555444333 3
Q ss_pred hccCC
Q 041759 501 CLPET 505 (525)
Q Consensus 501 ~~~~~ 505 (525)
..||.
T Consensus 194 ~~p~~ 198 (394)
T PRK10213 194 SLPSL 198 (394)
T ss_pred HCCCC
Confidence 34554
No 154
>TIGR00710 efflux_Bcr_CflA drug resistance transporter, Bcr/CflA subfamily. This subfamily of drug efflux proteins, a part of the major faciliator family, is predicted to have 12 membrane-spanning regions. Members with known activity include Bcr (bicyclomycin resistance protein) in E. coli, Flor (chloramphenicol and florfenicol resistance) in Salmonella typhimurium DT104, and CmlA (chloramphenicol resistance) in Pseudomonas sp. plasmid R1033.
Probab=99.21 E-value=3.9e-10 Score=111.20 Aligned_cols=159 Identities=16% Similarity=0.125 Sum_probs=125.0
Q ss_pred HHhhhhhcccccCChhHHHHHHHHHhcccccccCchhHHHHHHHHHhhcChhHHHHHHHHHHHHHHHHHHhccccccchh
Q 041759 340 VYYGMTLGIENLGFDIYLGVVFNALLEIPNLASTIPSFFLTFFLIQKWNRKSSLLVLFIISGICSIMAVVANDISNAGKR 419 (525)
Q Consensus 340 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~d~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 419 (525)
.....|.+.+++|.+..+.+...+...+ +.+++.++.|++.||+|||+.+..+..+..++.+.....++. .
T Consensus 24 ~~~~~p~~~~~~g~s~~~~g~~~~~~~~----~~~~~~~~~g~l~d~~g~r~~~~~~~~~~~~~~~~~~~~~~~-----~ 94 (385)
T TIGR00710 24 YLPAFPEIAADLSTPASIVQMTLTLYLL----GFAAGQLLWGPLSDRYGRRPVLLLGLFIFALSSLGLALSNNI-----E 94 (385)
T ss_pred hcccHHHHHHHhCCCHHHHHHHHHHHHH----HHHHHHHhhhhHHHhcCChHHHHHHHHHHHHHHHHHHHHccH-----H
Confidence 3334567778889998888888887777 777999999999999999999999998888888877665443 4
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhhccccCcchhhhhhHHHHHHHHHHHHHHHHHHhh--ccCchhHHHHHHHHHHHHHHH
Q 041759 420 MRIGLELASLFSAYIAYTVIFIYAIELFPTCVRNSATSIMRLAIIFAAIFSSVLVAA--GSNNEFVSYGVFGLVIICCGF 497 (525)
Q Consensus 420 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~r~~~~~~~~~~~~~g~~~~p~i~~~--~~~~~~~~~~~~~~~~~~~~~ 497 (525)
...+..++.+++.+...+....++.|.+|+++|+++.++.+....+|..++|.+.+. ...++...+.+.+++.++..+
T Consensus 95 ~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~l~~~~~~~~~~~~~~~~~~~~~~ 174 (385)
T TIGR00710 95 TLLVLRFVQAFGASAGSVISQALVRDIYPGEELSRIYSILMPVLALAPAVAPLLGGYILVWLSWHAIFAFLSLAGILLSA 174 (385)
T ss_pred HHHHHHHHHHcchhHHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHH
Confidence 566677788888888888999999999999999999999999999999999998884 334566667776666655554
Q ss_pred HH-HhccCCCC
Q 041759 498 FV-ICLPETRG 507 (525)
Q Consensus 498 ~~-~~~~~~~~ 507 (525)
.. +..||+++
T Consensus 175 ~~~~~~~~~~~ 185 (385)
T TIGR00710 175 LIFFILPETLP 185 (385)
T ss_pred HHHHhCCCCCC
Confidence 43 44555443
No 155
>PRK11195 lysophospholipid transporter LplT; Provisional
Probab=99.21 E-value=3.7e-10 Score=111.39 Aligned_cols=172 Identities=11% Similarity=0.061 Sum_probs=120.0
Q ss_pred hHHHHHHHHHHHHHHHHHHHhhhhhcccccCChhHHHHHHHHHhcccccccCchhHHHHHHHHHhhcChhHHHHHHHHHH
Q 041759 322 WALERTLALMVPGFGIGVVYYGMTLGIENLGFDIYLGVVFNALLEIPNLASTIPSFFLTFFLIQKWNRKSSLLVLFIISG 401 (525)
Q Consensus 322 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~d~~g~~~~~~~~~~~~~ 401 (525)
+++...+..++..++........+....+.+.+....+...+...+ ...+..++.|++.||+|||+++.++..+..
T Consensus 4 ~f~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~l----~~~l~~~~~G~laDr~grr~vl~~~~~~~~ 79 (393)
T PRK11195 4 GFYAIMAAQFFSALADNALLFAAIALLKELHYPDWSQPLLQMFFVL----AYIVLAPFVGAFADSFPKGRVMFIANGIKL 79 (393)
T ss_pred cHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCcHHHHHHHHHHHHH----HHHHHHhhhhHhhhccCCchhhHHHHHHHH
Confidence 3444444444444444444444455567777777777777666666 666889999999999999999999998887
Q ss_pred HHHHHHHHhccccccchhHHHHHHHHHHHHHHHHHHHHHhhhccccCcchhhhhhHHHHHHHHHHHHHHHHHHhhc-cCc
Q 041759 402 ICSIMAVVANDISNAGKRMRIGLELASLFSAYIAYTVIFIYAIELFPTCVRNSATSIMRLAIIFAAIFSSVLVAAG-SNN 480 (525)
Q Consensus 402 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~r~~~~~~~~~~~~~g~~~~p~i~~~~-~~~ 480 (525)
++.+.+.... . . ++..++.+++.+...|...+++.|.+|+++|+++.++......+|.+++|.+.|.. ...
T Consensus 80 ~~~~~~~~~~-~----~---~~~r~l~G~~~a~~~pa~~a~i~~~~~~~~~~~a~~~~~~~~~~~~~~Gp~lgG~l~~~~ 151 (393)
T PRK11195 80 LGCLLMLFGI-H----P---LLAYGLVGIGAAAYSPAKYGILTELLPGEKLVKANGWMEGSTIAAILLGTVLGGALADPH 151 (393)
T ss_pred HHHHHHHHHH-H----H---HHHHHHHHHHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 7766654432 1 1 34456778888889999999999999999999999999999999999999999853 222
Q ss_pred hhHHHHHHHHHHHHHHHHHHhccCC
Q 041759 481 EFVSYGVFGLVIICCGFFVICLPET 505 (525)
Q Consensus 481 ~~~~~~~~~~~~~~~~~~~~~~~~~ 505 (525)
+...+.+.+.+.+++.+..+.+||.
T Consensus 152 ~~~~~~i~~~~~~~~~~~~~~l~~~ 176 (393)
T PRK11195 152 AEAALAVCALIYLLAALFNLFIPRL 176 (393)
T ss_pred HHHHHHHHHHHHHHHHHHHhcCCCC
Confidence 3333333333333333444556654
No 156
>TIGR00893 2A0114 d-galactonate transporter.
Probab=99.21 E-value=3e-10 Score=112.32 Aligned_cols=158 Identities=16% Similarity=0.169 Sum_probs=126.2
Q ss_pred HHHhhhhhcccccCChhHHHHHHHHHhcccccccCchhHHHHHHHHHhhcChhHHHHHHHHHHHHHHHHHHhccccccch
Q 041759 339 VVYYGMTLGIENLGFDIYLGVVFNALLEIPNLASTIPSFFLTFFLIQKWNRKSSLLVLFIISGICSIMAVVANDISNAGK 418 (525)
Q Consensus 339 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~d~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 418 (525)
......|.+.+++|.+..+.+.+.+...+ +..++.++.|++.||+|||+.+..+.++..++..+..+..+.
T Consensus 12 ~~~~~~~~~~~~~g~s~~~~~~~~~~~~~----~~~~~~~~~g~l~d~~g~r~~~~~~~~~~~~~~~~~~~~~~~----- 82 (399)
T TIGR00893 12 NLSFAAPMLQEDLGLSAAQYGYVFSAFSW----GYVVGQFPGGWLLDRFGARKTLAVFIVIWGVFTGLQAFAGAY----- 82 (399)
T ss_pred hhhHhHHHHHHhhCCChhhHHHHHHHHHH----HHHHHHHhHHHHHHhcCcceeeHHHHHHHHHHHHHHHHHcCH-----
Confidence 33444567777889998888888888777 777999999999999999999999998888888877766543
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHhhhccccCcchhhhhhHHHHHHHHHHHHHHHHHHhh--ccCchhHHHHHHHHHHHHHH
Q 041759 419 RMRIGLELASLFSAYIAYTVIFIYAIELFPTCVRNSATSIMRLAIIFAAIFSSVLVAA--GSNNEFVSYGVFGLVIICCG 496 (525)
Q Consensus 419 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~r~~~~~~~~~~~~~g~~~~p~i~~~--~~~~~~~~~~~~~~~~~~~~ 496 (525)
...++..++.+++.+...+....++.|.+|+++|+++.++.+....+|..++|.+.+. ...++...+.+.+++.++..
T Consensus 83 ~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~ 162 (399)
T TIGR00893 83 VSLYILRVLLGAAEAPFFPGIILIVASWFPASERATAVSIFNSAQGLGGIIGGPLVGWILIHFSWQWAFIIEGVLGIIWG 162 (399)
T ss_pred HHHHHHHHHHHHHHHhhhhHHHHHHHHhCCHHHHHHHHHHHHHhchHHHHHHHHHHHHHHHhCCchHHHHHHHHHHHHHH
Confidence 4667777888888888889999999999999999999999999999999999998874 33456677777766665555
Q ss_pred HHHH-hccCC
Q 041759 497 FFVI-CLPET 505 (525)
Q Consensus 497 ~~~~-~~~~~ 505 (525)
++.+ ..+++
T Consensus 163 ~~~~~~~~~~ 172 (399)
T TIGR00893 163 VLWLKFIPDP 172 (399)
T ss_pred HHhhheecCC
Confidence 4433 34443
No 157
>TIGR00891 2A0112 putative sialic acid transporter.
Probab=99.21 E-value=5.1e-10 Score=111.18 Aligned_cols=156 Identities=13% Similarity=0.065 Sum_probs=120.2
Q ss_pred HhhhhhcccccCChhHHHHHHHHHhcccccccCchhHHHHHHHHHhhcChhHHHHHHHHHHHHHHHHHHhccccccchhH
Q 041759 341 YYGMTLGIENLGFDIYLGVVFNALLEIPNLASTIPSFFLTFFLIQKWNRKSSLLVLFIISGICSIMAVVANDISNAGKRM 420 (525)
Q Consensus 341 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~d~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 420 (525)
....+.+.+++|.+..+.+...+...+ +..++.++.|++.||+|||+.+..+.++..++.++..+..+. ..
T Consensus 32 ~~~~~~l~~~~~~s~~~~g~~~~~~~~----~~~~~~~~~G~l~Dr~g~r~~~~~~~~~~~~~~~~~~~~~~~-----~~ 102 (405)
T TIGR00891 32 ALVLAEVAGEFGLTTVDAASLISAALI----SRWFGALMFGLWGDRYGRRLPMVTSIVLFSAGTLACGFAPGY-----IT 102 (405)
T ss_pred HHHHHHHHHHhCCChhhHHHHHHHHHH----HHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHhccH-----HH
Confidence 344466667789998888888887777 777999999999999999999999988888887777665443 45
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhhccccCcchhhhhhHHHHHHHHHHHHHHHHHHhhc--cC--chhHHHHHHHHHHHHHH
Q 041759 421 RIGLELASLFSAYIAYTVIFIYAIELFPTCVRNSATSIMRLAIIFAAIFSSVLVAAG--SN--NEFVSYGVFGLVIICCG 496 (525)
Q Consensus 421 ~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~r~~~~~~~~~~~~~g~~~~p~i~~~~--~~--~~~~~~~~~~~~~~~~~ 496 (525)
.++..++.+++.+..++...+++.|.+|+++|+++.++.+....+|..++|.+.+.. .. ++...+.+.++..++..
T Consensus 103 l~~~~~l~G~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~g~~~~~~l~~~l~~~~~~~w~~~f~~~~~~~~~~~ 182 (405)
T TIGR00891 103 MFIARLVIGIGMGGEYGSSAAYVIESWPKHLRNKASGLLISGYAVGAVVAAQVYSLVVPVWGDGWRALFFISILPIIFAL 182 (405)
T ss_pred HHHHHHHHHhhhhhhhHHHHHHHHHhCChhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHhcCccHHHHHHHHHHHHHHHH
Confidence 667778888888888899999999999999999999999999999999999887741 12 24555555444444444
Q ss_pred HHHHhccCC
Q 041759 497 FFVICLPET 505 (525)
Q Consensus 497 ~~~~~~~~~ 505 (525)
+.....||+
T Consensus 183 ~~~~~~~~~ 191 (405)
T TIGR00891 183 WLRKNIPEA 191 (405)
T ss_pred HHHHhCCCC
Confidence 444455664
No 158
>TIGR00897 2A0118 polyol permease family. This family of proteins includes the ribitol and D-arabinitol transporters from Klebsiella pneumoniae and the alpha-ketoglutarate permease from Bacillus subtilis.
Probab=99.21 E-value=1.9e-10 Score=114.05 Aligned_cols=143 Identities=13% Similarity=0.043 Sum_probs=112.0
Q ss_pred ccceeeccccccchhhhhhhHHHHHHHHHHHhHHhhHhcccccCCchHHHH-HHHHHHHHHHHHHHh-----hhhHHHHH
Q 041759 100 ALTIISEWGLECSSAFIKGLPAASHFTGCLLGIVFLATLADSSLGRKNLLF-LSCLTMSVATSLTIF-----SNNLWIYS 173 (525)
Q Consensus 100 ~~~i~~~~~~~~~s~~~~g~~~s~~~lg~~~~~~~~G~l~dr~~Grk~~~~-~~~~~~~i~~~~~~~-----~~~~~~l~ 173 (525)
.|.+.+++|. +..+.+++.+...++..++.++.|+++|| +|||+.+. .+.+..+++.+...+ .++.+.++
T Consensus 245 ~p~~~~~~g~---s~~~~~~~~~~~~~~~~ig~~~~g~l~dr-~~~~~~~~~~~~l~~~~~~~~l~~~~~~~~~~~~~~~ 320 (402)
T TIGR00897 245 LPMFVAELGF---STSEWLQIWGTFFFTNIVFNVIFGIVGDK-LGWMNTVRWFGGVGCGIFTLALYYIPQHFGHSFAVAL 320 (402)
T ss_pred HHHHHHHcCC---ChhHHHHHHHHHHHHHHHHHHHHHHHHHh-hcchhHHHHHHHHHHHHHHHHHHHHHHccCCcHHHHH
Confidence 5666677898 88889999999999999999999999999 99988764 333334443333322 24677778
Q ss_pred HHHHHHhhcccchhhhhheeeEeeecCcchhhHHhHHHHHHHHHHHHHHHH-HHhccCCchHHHHHHHHHHHHHHH
Q 041759 174 LLRFFSGISRATIGTCTIVLLTEKVGTEWRGLVGILDSFFFTIGTLTLPAI-AYTNRSSSWTIIYLWTSIPTLVYS 248 (525)
Q Consensus 174 ~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~l~~~l-~~~~~~~~wr~~f~~~~~~~~~~~ 248 (525)
+..++.|++.+...+. ...+.|.. +++|+++.++.+....+|..++|.+ +.+.+..||+..+++.++..++..
T Consensus 321 ~~~~~~G~~~~~~~~~-~~~~~~~~-~~~~g~~~g~~~~~~~lg~~~gp~i~g~l~~~~g~~~~~~~~a~~~~i~~ 394 (402)
T TIGR00897 321 IIAIALGIFLAGYVPL-AAVFPTLA-PKHKGAAMSVLNLSAGLSAFLAPAIAVLFIGFFGAIGVVWIFAALYVVSA 394 (402)
T ss_pred HHHHHHHHHHHHHHHH-HHHHHhhC-cchhHHHHHHHHHHHHHHHHHHHHHHHHHHhhcchHHHHHHHHHHHHHHH
Confidence 8889999988876543 44556754 5689999999999999999999988 677777899999999988877766
No 159
>PRK10091 MFS transport protein AraJ; Provisional
Probab=99.20 E-value=8.5e-10 Score=108.58 Aligned_cols=172 Identities=14% Similarity=0.046 Sum_probs=130.7
Q ss_pred HHHHHHHHHHHHHHHHhhhhhcccccCChhHHHHHHHHHhcccccccCchhHHHHHHHHHhhcChhHHHHHHHHHHHHHH
Q 041759 326 RTLALMVPGFGIGVVYYGMTLGIENLGFDIYLGVVFNALLEIPNLASTIPSFFLTFFLIQKWNRKSSLLVLFIISGICSI 405 (525)
Q Consensus 326 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~d~~g~~~~~~~~~~~~~~~~~ 405 (525)
.....+............+|.+.+++|.+....+...+...+ +.+++.++.|++.||+|||+.+..+..+.+++.+
T Consensus 8 ~~~~~~~~~~~~~~~~~~l~~~~~~~g~s~~~~g~~~s~~~~----~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~ 83 (382)
T PRK10091 8 LALGTFGLGMAEFGIMGVLTELAHDVGISIPAAGHMISYYAL----GVVVGAPIIALFSSRYSLKHILLFLVALCVIGNA 83 (382)
T ss_pred HHHHHHHHHhhHHHHHhChHHHHHHcCCCHHHHhHHHHHHHH----HHHHHHHHHHHHHccCccHHHHHHHHHHHHHHHH
Confidence 333334444444444455677778899998888888888877 8889999999999999999999999999998888
Q ss_pred HHHHhccccccchhHHHHHHHHHHHHHHHHHHHHHhhhccccCcchhhhhhHHHHHHHHHHHHHHHHHHhh--ccCchhH
Q 041759 406 MAVVANDISNAGKRMRIGLELASLFSAYIAYTVIFIYAIELFPTCVRNSATSIMRLAIIFAAIFSSVLVAA--GSNNEFV 483 (525)
Q Consensus 406 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~r~~~~~~~~~~~~~g~~~~p~i~~~--~~~~~~~ 483 (525)
+..+.++. +..++..++.+++.+...+....+..|.+|+++|+.++++......+|..++|.+.+. ...++..
T Consensus 84 l~~~~~~~-----~~l~~~r~l~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~l~~~l~~~~gwr~ 158 (382)
T PRK10091 84 MFTLSSSY-----LMLAIGRLVSGFPHGAFFGVGAIVLSKIIKPGKVTAAVAGMVSGMTVANLLGIPLGTYLSQEFSWRY 158 (382)
T ss_pred HHHHhCcH-----HHHHHHHHHHHhhhHHHHHHHHHHHHHhCChHHhhHHHHHHHHHHHHHHHHhccHHHHHhhhccHHH
Confidence 77766543 4566677888888888778888888999999999999999988889999999888774 2345677
Q ss_pred HHHHHHHHHHHHHHH-HHhccCCC
Q 041759 484 SYGVFGLVIICCGFF-VICLPETR 506 (525)
Q Consensus 484 ~~~~~~~~~~~~~~~-~~~~~~~~ 506 (525)
.|.+.+++.++..+. .+++||.+
T Consensus 159 ~f~~~~~~~~~~~~~~~~~lp~~~ 182 (382)
T PRK10091 159 TFLLIAVFNIAVLASIYFWVPDIR 182 (382)
T ss_pred HHHHHHHHHHHHHHHHHHhCCCCC
Confidence 777777665554443 34566643
No 160
>PRK03699 putative transporter; Provisional
Probab=99.20 E-value=7.8e-11 Score=116.43 Aligned_cols=151 Identities=13% Similarity=0.018 Sum_probs=123.0
Q ss_pred cccee-eccccccchhhhhhhHHHHHHHHHHHhHHhhHhcccccCCchHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHH
Q 041759 100 ALTII-SEWGLECSSAFIKGLPAASHFTGCLLGIVFLATLADSSLGRKNLLFLSCLTMSVATSLTIFSNNLWIYSLLRFF 178 (525)
Q Consensus 100 ~~~i~-~~~~~~~~s~~~~g~~~s~~~lg~~~~~~~~G~l~dr~~Grk~~~~~~~~~~~i~~~~~~~~~~~~~l~~~r~l 178 (525)
.|.+. +++|+ +..+.+++.+.+.++..++.++.|+++|| +|||+.+.....+..+..++....++.+.+.+..++
T Consensus 228 ~p~~l~~~~g~---s~~~~~~~~~~~~~~~~ig~~~~g~l~dr-~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 303 (394)
T PRK03699 228 VPEYAQKKFGM---SLEDAGNLVSNFWMAYMVGMWIFSFIVRF-FDLQRILTVLAGLALVLMYLFVNTDDPSHLLYAILG 303 (394)
T ss_pred HHHHHHHHcCC---ChHHhhHHHHHHHHHHHHHHHHHHHHHHH-hchhhHHHHHHHHHHHHHHHHHHcCCchHHHHHHHH
Confidence 34444 67899 99999999999999999999999999999 999999988887777777777777788777788889
Q ss_pred HhhcccchhhhhheeeEeeecCcchhhHHhHHHHHHHHHHHHHHHH-HHhccCCchHHHHHHHHHHHHHHHhHhheeec
Q 041759 179 SGISRATIGTCTIVLLTEKVGTEWRGLVGILDSFFFTIGTLTLPAI-AYTNRSSSWTIIYLWTSIPTLVYSGLLYIFVS 256 (525)
Q Consensus 179 ~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~l~~~l-~~~~~~~~wr~~f~~~~~~~~~~~~~~~~~lp 256 (525)
.|++.+...+...++..|..| +++++..+.......+|..++|.+ +.+.+..||+..+++.+++.++.. +....++
T Consensus 304 ~G~~~~~~~~~~~~~~~~~~~-~~~~~~~g~~~~~~~~g~~i~p~~~G~l~~~~g~~~~~~~~~~~~~~~~-~~~~~~~ 380 (394)
T PRK03699 304 LGFFSSAIYTTIITLGSQQTK-VASPKLVNFILTCGTIGTMLTFVVTSPIVAHFGLQAALLTANGLYAVVF-VMCILLG 380 (394)
T ss_pred HHHHHHHHHHHHHHHHHHHcc-CCCHHHHHHHHHhhhHHHHHHHHHHHHHHHHhCchhhhhhhHHHHHHHH-HHHHHHH
Confidence 999888788877777777665 446777888888889999999988 666677899999998888877776 4344444
No 161
>TIGR00924 yjdL_sub1_fam amino acid/peptide transporter (Peptide:H+ symporter), bacterial. The model describes proton-dependent oligopeptide transporters in bacteria. This model is restricted in its range in recognizing bacterial proton-dependent oligopeptide transporters, although they are found in yeast, plants and animals. They function by proton symport in a 1:1 stoichiometry, which is variable in different species. All of them are predicted to contain 12 transmembrane domains, for which limited experimental evidence exists.
Probab=99.19 E-value=3.1e-10 Score=114.41 Aligned_cols=160 Identities=9% Similarity=0.029 Sum_probs=120.2
Q ss_pred HHHHHHHHhhhhhcccc---cCChhHHHHHHHHHhcccccccCchhHHHHHHHHHh-hcChhHHHHHHHHHHHHHHHHHH
Q 041759 334 GFGIGVVYYGMTLGIEN---LGFDIYLGVVFNALLEIPNLASTIPSFFLTFFLIQK-WNRKSSLLVLFIISGICSIMAVV 409 (525)
Q Consensus 334 ~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~d~-~g~~~~~~~~~~~~~~~~~~~~~ 409 (525)
.++.......++.++.+ +|.+..+.+...+...+ +..++.+++|+++|| +|||+.+.++.++.+++.+++.+
T Consensus 23 ~~~~~~~~~~L~~yl~~~~~lg~s~~~ag~~~~~~~~----~~~~~~~~~G~laDr~~G~~~~l~~~~~~~~~g~~~~~~ 98 (475)
T TIGR00924 23 RFSYYGMQGILAVYLVQQAGLGFSQEQAFIIFGAYSA----LVYLLTSVGWWFGDRVWGTKKTMVLGGIVLMLGHFMLAM 98 (475)
T ss_pred HHHHHHHHHHHHHHHHhCCCCCCCHHHHHHHHHHHHH----HHHHHHhhHHHHHHhhcchHHHHHHHHHHHHHHHHHHHh
Confidence 34444444555666543 78898888888888777 777999999999999 89999999999999998887776
Q ss_pred hccccccchhHHHHHHHHHHHHHHHHHHHHHhhhccccCcch---hhhhhHHHHHHHHHHHHHHHHHHhhc--cCchhHH
Q 041759 410 ANDISNAGKRMRIGLELASLFSAYIAYTVIFIYAIELFPTCV---RNSATSIMRLAIIFAAIFSSVLVAAG--SNNEFVS 484 (525)
Q Consensus 410 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~---r~~~~~~~~~~~~~g~~~~p~i~~~~--~~~~~~~ 484 (525)
..+. ....+...+.+++.+...+...+++.+.+|++. |+++.++.+...++|..++|.+.+.. ..++...
T Consensus 99 ~~~~-----~~~~~~~~l~g~g~g~~~~~~~~~~a~~~~~~~~~~r~~~~~~~~~~~niG~~ig~~l~g~l~~~~g~~~~ 173 (475)
T TIGR00924 99 SIYP-----DLIFYGLGTIAVGSGLFKANPSSMVGKLYERGDMPRRDGGFTLFYMSINIGSFISPLLAGVIAENYGYHVG 173 (475)
T ss_pred cccH-----hHHHHHHHHHHhccccccCCHHHHHHHhcCCCCcccccceehhHHHHHHHHHHHHHHHHHHHHHhcChHHH
Confidence 5433 244455556677777777888889999988653 88899999999999999999998852 3356777
Q ss_pred HHHHHHHHHHHHHHHHhc
Q 041759 485 YGVFGLVIICCGFFVICL 502 (525)
Q Consensus 485 ~~~~~~~~~~~~~~~~~~ 502 (525)
|.+.++..+++.+..++.
T Consensus 174 f~~~~~~~~~~~l~~~~~ 191 (475)
T TIGR00924 174 FNLAAVGMVIGLLTFFAG 191 (475)
T ss_pred HHHHHHHHHHHHHHHHHc
Confidence 777666555554444443
No 162
>PRK12307 putative sialic acid transporter; Provisional
Probab=99.19 E-value=6.4e-10 Score=111.32 Aligned_cols=142 Identities=15% Similarity=0.143 Sum_probs=115.6
Q ss_pred HHHHhhhhhcccccCChhHHHHHHHHHhcccccccCchhHHHHHHHHHhhcChhHHHHHHHHHHHHHHHHHHhccccccc
Q 041759 338 GVVYYGMTLGIENLGFDIYLGVVFNALLEIPNLASTIPSFFLTFFLIQKWNRKSSLLVLFIISGICSIMAVVANDISNAG 417 (525)
Q Consensus 338 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~d~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 417 (525)
....+..+.+.+++|.+..+.+...+...+ +..++.++.|++.||+|||+++..+.++.+++.++..+..+.
T Consensus 35 ~~~~~~~~~i~~~~~~s~~~~~~~~~~~~~----~~~l~~~~~g~l~dr~g~r~~l~~~~~~~~~~~~~~~~~~~~---- 106 (426)
T PRK12307 35 MLIFYIMYLIKADLGLTDMEGAFLATAAFI----GRPFGGALFGLLADKFGRKPLMMWSIVAYSVGTGLSGLASGV---- 106 (426)
T ss_pred HHHHHHHHHHHHHhCCCHHHHHHHHHHHHH----HHHHHHHHHHHHHHHhCChHHHHHHHHHHHHHHHHHHHHhHH----
Confidence 344555677778889998888888877777 777999999999999999999999999999988877766543
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHhhhccccCcchhhhhhHHHHHHHHHHHHHHHHHHhh--ccCchhHHHHHH
Q 041759 418 KRMRIGLELASLFSAYIAYTVIFIYAIELFPTCVRNSATSIMRLAIIFAAIFSSVLVAA--GSNNEFVSYGVF 488 (525)
Q Consensus 418 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~r~~~~~~~~~~~~~g~~~~p~i~~~--~~~~~~~~~~~~ 488 (525)
...++.-++.+++.+..++....++.|.+|++.|+++.++......+|.+++|.+.+. ...++...+.+.
T Consensus 107 -~~l~~~r~l~G~g~g~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~lg~~~~~~l~~~l~~~~~w~~~f~i~ 178 (426)
T PRK12307 107 -IMLTLSRFIVGMGMAGEYACASTYAVESWPKHLKSKASAFLVSGFGIGNIIAAYFMPSFAEAYGWRAAFFVG 178 (426)
T ss_pred -HHHHHHHHHHHHHHhhHHHHHHHHHHHhCCHhHhhHhhhHHHHHHhHHHHHHHHHHHHHcccCCHHHHHHHH
Confidence 4667777888888888889999999999999999999999999889999999888764 223455566553
No 163
>TIGR00883 2A0106 metabolite-proton symporter. This model represents the metabolite:H+ symport subfamily of the major facilitator superfamily (pfam00083), including citrate-H+ symporters, dicarboxylate:H+ symporters, the proline/glycine-betaine transporter ProP, etc.
Probab=99.19 E-value=1.2e-10 Score=115.01 Aligned_cols=139 Identities=19% Similarity=0.129 Sum_probs=109.7
Q ss_pred eeeccccccchhhhhhhHHHHHHHHHHHhHHhhHhcccccCCchHHHHHHHHHHHHHH--HHHHh--hhhHHHHHHHHHH
Q 041759 103 IISEWGLECSSAFIKGLPAASHFTGCLLGIVFLATLADSSLGRKNLLFLSCLTMSVAT--SLTIF--SNNLWIYSLLRFF 178 (525)
Q Consensus 103 i~~~~~~~~~s~~~~g~~~s~~~lg~~~~~~~~G~l~dr~~Grk~~~~~~~~~~~i~~--~~~~~--~~~~~~l~~~r~l 178 (525)
+++++|. +..+.+...+...++..++.++.|+++|| +|||+.+..+..+..+.. +...+ .++.+.+++..++
T Consensus 246 ~~~~~g~---~~~~~~~~~~~~~~~~~~~~~~~g~l~dr-~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 321 (394)
T TIGR00883 246 LTQTLGL---SANSALLVLMLSLILFFITIPLSGALSDR-IGRRPVLIIFTVLAALLAVPLLMALLDSGSFTLFFFLVLG 321 (394)
T ss_pred HHHhcCC---ChhHHHHHHHHHHHHHHHHHHHHHHHHHH-hchHHHHHHHHHHHHHHHHHHHHHHhcCCchHHHHHHHHH
Confidence 3467888 88899999999999999999999999999 999998776555444333 22222 2467777888899
Q ss_pred HhhcccchhhhhheeeEeeecCcchhhHHhH-HHHHHHHHHHHHHHH-HHhccCCc-hHHHHHHHHHHHH
Q 041759 179 SGISRATIGTCTIVLLTEKVGTEWRGLVGIL-DSFFFTIGTLTLPAI-AYTNRSSS-WTIIYLWTSIPTL 245 (525)
Q Consensus 179 ~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~-~~~~~~~G~~l~~~l-~~~~~~~~-wr~~f~~~~~~~~ 245 (525)
.|++.+...+...+++.|.+|+++|+++.++ .+.+..+|..++|.+ +.+.+..| |++.++...+..+
T Consensus 322 ~g~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~g~~~~p~~~g~l~~~~g~~~~~~~~~~~~~l 391 (394)
T TIGR00883 322 LALIGGMYTGPMGSFLPELFPTEVRYTGASLAYNLAGAIFGGFAPYIAAALVAMTGDWYAIGYYLAALAL 391 (394)
T ss_pred HHHHHHHHhhhHHHHHHHhCCccceeeEeeehhHhHHHHHhhHHHHHHHHHHHHcCcchhHHHHHHHHHH
Confidence 9999988999999999999999999999987 456677888899988 55556566 8887777665544
No 164
>PRK09705 cynX putative cyanate transporter; Provisional
Probab=99.19 E-value=2.5e-10 Score=112.65 Aligned_cols=154 Identities=15% Similarity=0.076 Sum_probs=119.5
Q ss_pred ccceeeccccccchhhhhhhHHHHHHHHHHHhHHhhHhcccccCCchHHHHHHHHHHHHHHHHHHhhh-hHHHHHHHHHH
Q 041759 100 ALTIISEWGLECSSAFIKGLPAASHFTGCLLGIVFLATLADSSLGRKNLLFLSCLTMSVATSLTIFSN-NLWIYSLLRFF 178 (525)
Q Consensus 100 ~~~i~~~~~~~~~s~~~~g~~~s~~~lg~~~~~~~~G~l~dr~~Grk~~~~~~~~~~~i~~~~~~~~~-~~~~l~~~r~l 178 (525)
.|.+.+++|. +..+.|...+.+.++..++.++.|++.|| +|||+.+..+..+..++.++....+ +...+ .-++
T Consensus 228 lp~~l~~~g~---s~~~ag~~~~~~~i~~i~g~~~~g~l~~r-~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~--~~~l 301 (393)
T PRK09705 228 LPAFYIEIGA---SAQYSGSLLALMTLGQAAGALLMPAMARH-QDRRKLLMLALVLQLVGFCGFIWLPLQLPVL--WAMV 301 (393)
T ss_pred HHHHHHHcCC---ChhhhhHHHHHHHHHHHHHHHHHHHHHhh-ccchHHHHHHHHHHHHHHHHHHHccchHHHH--HHHH
Confidence 4445556888 99999999999999999999999999999 9999999988888777766554333 32222 2346
Q ss_pred HhhcccchhhhhheeeEeeec-CcchhhHHhHHHHHHHHHHHHHHHH-HHhccCC-chHHHHHHHHHHHHHHHhHhheee
Q 041759 179 SGISRATIGTCTIVLLTEKVG-TEWRGLVGILDSFFFTIGTLTLPAI-AYTNRSS-SWTIIYLWTSIPTLVYSGLLYIFV 255 (525)
Q Consensus 179 ~G~~~~~~~~~~~~~i~~~~~-~~~r~~~~~~~~~~~~~G~~l~~~l-~~~~~~~-~wr~~f~~~~~~~~~~~~~~~~~l 255 (525)
.|++.+...+.......+..+ +++|++..++.+....++..++|.+ +++.+.. +|+..|.+.++..++..+....+.
T Consensus 302 ~g~g~g~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~~~~~gp~~~G~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~ 381 (393)
T PRK09705 302 CGLGLGGAFPLCLLLALDHSVQPAIAGKLVAFMQGIGFIIAGLAPWFSGVLRSISGNYLMDWAFHALCVVGLMIITLRFA 381 (393)
T ss_pred HHHhccchHHHHHHHHHhhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCchHHHHHHHHHHHHHHHHHHHhc
Confidence 688888777877766666664 5789999999999999999999988 5665544 488888888877777775667777
Q ss_pred cCCc
Q 041759 256 SESP 259 (525)
Q Consensus 256 pesp 259 (525)
||++
T Consensus 382 ~~~~ 385 (393)
T PRK09705 382 PARF 385 (393)
T ss_pred cccc
Confidence 8764
No 165
>COG2814 AraJ Arabinose efflux permease [Carbohydrate transport and metabolism]
Probab=99.17 E-value=1.7e-09 Score=102.56 Aligned_cols=155 Identities=12% Similarity=0.074 Sum_probs=133.8
Q ss_pred HHhhhhhcccccCChhHHHHHHHHHhcccccccCchhHHHHHHHHHhhcChhHHHHHHHHHHHHHHHHHHhccccccchh
Q 041759 340 VYYGMTLGIENLGFDIYLGVVFNALLEIPNLASTIPSFFLTFFLIQKWNRKSSLLVLFIISGICSIMAVVANDISNAGKR 419 (525)
Q Consensus 340 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~d~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 419 (525)
..-.+|...++++.+...++...+...+ +..++.++...+.+|+.||++++....+..++.++..+.++. .
T Consensus 32 ~~gLLp~iA~dl~vs~~~aG~lis~yAl----~~ai~ap~l~~lt~r~~Rr~lLl~~l~lFi~~n~l~alAp~f-----~ 102 (394)
T COG2814 32 PVGLLPPIAADLGVSEGAAGQLITAYAL----GVALGAPLLALLTGRLERRRLLLGLLALFIVSNLLSALAPSF-----A 102 (394)
T ss_pred HHhchHHHHHHcCCCHHHHHHHHHHHHH----HHHHHHHHHHHHHcccchHHHHHHHHHHHHHHHHHHHHhccH-----H
Confidence 3344577778899999999999998888 888999999999999999999999999999999999998776 5
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhhccccCcchhhhhhHHHHHHHHHHHHHHHHHHhh--ccCchhHHHHHHHHHHHHHHH
Q 041759 420 MRIGLELASLFSAYIAYTVIFIYAIELFPTCVRNSATSIMRLAIIFAAIFSSVLVAA--GSNNEFVSYGVFGLVIICCGF 497 (525)
Q Consensus 420 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~r~~~~~~~~~~~~~g~~~~p~i~~~--~~~~~~~~~~~~~~~~~~~~~ 497 (525)
...+.-++.++..+..+++....+.++.|+++|++++++...-..++.++|..+..+ +..++...|+..+++.++..+
T Consensus 103 ~Ll~aR~~~g~a~G~f~~i~~~~a~~lvpp~~~~~Aiaiv~~G~tlA~v~GvPLGt~ig~~~GWR~~F~~ia~l~ll~~~ 182 (394)
T COG2814 103 VLLLARALAGLAHGVFWSIAAALAARLVPPGKRGRALALVFTGLTLATVLGVPLGTFLGQLFGWRATFLAIAVLALLALL 182 (394)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHcCccchhhHHHHHHHHHHHHHHHhccHHHHHHHHhhHHHHHHHHHHHHHHHHH
Confidence 788899999999999999999999999999999999999999888888887766654 334688889988888887765
Q ss_pred H-HHhcc
Q 041759 498 F-VICLP 503 (525)
Q Consensus 498 ~-~~~~~ 503 (525)
. ...+|
T Consensus 183 ~~~~~lP 189 (394)
T COG2814 183 LLWKLLP 189 (394)
T ss_pred HHHHhCC
Confidence 4 45567
No 166
>COG2271 UhpC Sugar phosphate permease [Carbohydrate transport and metabolism]
Probab=99.16 E-value=2.9e-10 Score=106.47 Aligned_cols=154 Identities=14% Similarity=0.075 Sum_probs=131.8
Q ss_pred hhhhhcccccCChhHHHHHHHHHhcccccccCchhHHHHHHHHHhhcChhHHHHHHHHHHHHHHHHHHhccccccchhHH
Q 041759 342 YGMTLGIENLGFDIYLGVVFNALLEIPNLASTIPSFFLTFFLIQKWNRKSSLLVLFIISGICSIMAVVANDISNAGKRMR 421 (525)
Q Consensus 342 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~d~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 421 (525)
...|.+.++.+++..+.+.+.+...+ ..-++.++.|.++||.+.|+.+.++++++++..+++++.+.. ..+
T Consensus 50 ~a~p~l~e~~~lsk~~lG~i~s~f~i----~YG~sKf~~G~~sDr~npr~fm~~gLilsai~nil~Gfs~s~-----~~~ 120 (448)
T COG2271 50 LAMPALIEDGGLSKTQLGILGSAFSI----TYGVSKFVMGVLSDRSNPRYFMAFGLILSAIVNILFGFSPSL-----FLF 120 (448)
T ss_pred hccHHHHHhcCCCHHHHHHHHHHHHH----HHHHHHHHhhhhcccCCCceeehHHHHHHHHHHHHHhhhhHH-----HHH
Confidence 44477778888999999999888888 777999999999999999999999999999999999988754 578
Q ss_pred HHHHHHHHHHHHHHHHHHHhhhccccCcchhhhhhHHHHHHHHHHHHHHHHHH--hh--ccCchhHHHHHHHHHHHHHHH
Q 041759 422 IGLELASLFSAYIAYTVIFIYAIELFPTCVRNSATSIMRLAIIFAAIFSSVLV--AA--GSNNEFVSYGVFGLVIICCGF 497 (525)
Q Consensus 422 ~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~r~~~~~~~~~~~~~g~~~~p~i~--~~--~~~~~~~~~~~~~~~~~~~~~ 497 (525)
.++..+.+.+.+..+|.....+..-+|++.||+..++-++..++|+.+.|.+. +. ...++...|++-+++.++..+
T Consensus 121 ~~l~~lng~fQg~Gwpp~~~~i~~Wfsr~eRG~~~siWn~shNiGGal~~~~~~la~~~~~~~w~~~f~~pgiiaiival 200 (448)
T COG2271 121 AVLWVLNGWFQGMGWPPCARTITHWFSRKERGTWWSIWNTSHNIGGALAPLVALLAFFAFHGGWRAAFYFPGIIAIIVAL 200 (448)
T ss_pred HHHHHHHHHHhcCCCcHHHHHHHHHcCccccCceEEEehhhhhcccchHHHHHHHHHHHhccchhHHHHHHHHHHHHHHH
Confidence 88999999999999999999999999999999999999999999999888888 53 333677888888887776665
Q ss_pred HH-HhccC
Q 041759 498 FV-ICLPE 504 (525)
Q Consensus 498 ~~-~~~~~ 504 (525)
+. +.+++
T Consensus 201 ~~~~~~rd 208 (448)
T COG2271 201 ILLFLLRD 208 (448)
T ss_pred HHHHHhCC
Confidence 44 44443
No 167
>PRK11646 multidrug resistance protein MdtH; Provisional
Probab=99.16 E-value=2.4e-09 Score=105.85 Aligned_cols=170 Identities=11% Similarity=0.064 Sum_probs=126.0
Q ss_pred HHHHHHHHHHHHHHHHhhhhhc-ccccCChhHHHHHHHHHhcccccccCchhHHHHHHHHHhhcChhHHHHHHHHHHHHH
Q 041759 326 RTLALMVPGFGIGVVYYGMTLG-IENLGFDIYLGVVFNALLEIPNLASTIPSFFLTFFLIQKWNRKSSLLVLFIISGICS 404 (525)
Q Consensus 326 ~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~d~~g~~~~~~~~~~~~~~~~ 404 (525)
.+...++...+....+..++.+ .++.|.+....+...+...+ ...+..++.|+++||+|||+.+..+..+..++.
T Consensus 15 ~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~gl~~~~~~l----~~~~~~~~~G~l~dr~g~k~~l~~~~~~~~~~~ 90 (400)
T PRK11646 15 LLIDNMLVVLGFFVVFPLISIRFVDQLGWAAVMVGIALGLRQF----IQQGLGIFGGAIADRFGAKPMIVTGMLMRAAGF 90 (400)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhCCcHHHHHHHHHHHHH----HHHHHHhhhhHHHHHhCchHHHHHHHHHHHHHH
Confidence 3444445555555555455544 46789999998888887666 555778899999999999999999999999988
Q ss_pred HHHHHhccccccchhHHHHHHHHHHHHHHHHHHHHHhhhccccCcchhhhhhHHHHHHHHHHHHHHHHHHhh-ccCchhH
Q 041759 405 IMAVVANDISNAGKRMRIGLELASLFSAYIAYTVIFIYAIELFPTCVRNSATSIMRLAIIFAAIFSSVLVAA-GSNNEFV 483 (525)
Q Consensus 405 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~r~~~~~~~~~~~~~g~~~~p~i~~~-~~~~~~~ 483 (525)
+.+...++ ++..++..++.+++.+...+...+++.+.+|+++|+++.|+.+....+|..++|.+.+. ...++..
T Consensus 91 ~~~~~~~~-----~~~l~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~g~~ig~~l~g~l~~~g~~~ 165 (400)
T PRK11646 91 ATMAIAHE-----PWLLWLSCILSGLGGTLFDPPRTALVIKLIRPHQRGRFFSLLMMQDSAGAVIGALLGSWLLQYDFRL 165 (400)
T ss_pred HHHHHhcc-----HHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHH
Confidence 88766543 33556666777777777778888899999999999999999999999999999999884 2334556
Q ss_pred HHHHHHHHHHHHHHH-HHhccC
Q 041759 484 SYGVFGLVIICCGFF-VICLPE 504 (525)
Q Consensus 484 ~~~~~~~~~~~~~~~-~~~~~~ 504 (525)
.|++.+++.++..++ .+..|+
T Consensus 166 ~f~~~~~~~~~~~i~~~~~~~~ 187 (400)
T PRK11646 166 VCATGAVLFVLAAAFNAWLLPA 187 (400)
T ss_pred HHHHHHHHHHHHHHHHHHhCCc
Confidence 666666555554433 344454
No 168
>TIGR00895 2A0115 benzoate transport.
Probab=99.16 E-value=7.2e-10 Score=109.78 Aligned_cols=158 Identities=14% Similarity=0.057 Sum_probs=121.7
Q ss_pred HHHhhhhhcccccCChhHHHHHHHHHhcccccccCchhHHHHHHHHHhhcChhHHHHHHHHHHHHHHHHHHhccccccch
Q 041759 339 VVYYGMTLGIENLGFDIYLGVVFNALLEIPNLASTIPSFFLTFFLIQKWNRKSSLLVLFIISGICSIMAVVANDISNAGK 418 (525)
Q Consensus 339 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~d~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 418 (525)
...+..|.+.+++|.+....+.+.+...+ +.+++.++.+++.||+|||+.+..+..+..++.++.....+.
T Consensus 35 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~~~~~~~~~~~~~----- 105 (398)
T TIGR00895 35 AMGFAAPAISAEWGLDPVQLGFLFSAGLI----GMAFGALFFGPLADRIGRKRVLLWSILLFSVFTLLCALATNV----- 105 (398)
T ss_pred HHHhhHHHHhhccCCCHHHHHHHHHHHHH----HHHHHHHHhHHHHHHhhhHHHHHHHHHHHHHHHHHHHHccch-----
Confidence 34455677788889988888887777776 777999999999999999999999988888887776665433
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHhhhccccCcchhhhhhHHHHHHHHHHHHHHHHHHhh--ccCchhHHHHHHHHHHHHHH
Q 041759 419 RMRIGLELASLFSAYIAYTVIFIYAIELFPTCVRNSATSIMRLAIIFAAIFSSVLVAA--GSNNEFVSYGVFGLVIICCG 496 (525)
Q Consensus 419 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~r~~~~~~~~~~~~~g~~~~p~i~~~--~~~~~~~~~~~~~~~~~~~~ 496 (525)
...++..++.+++.+...+...++..|.+|++.|+++.++......+|..++|.+.+. ...++...+.+.+++.++..
T Consensus 106 ~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~g~~~~~~~~~~~~~~~~ 185 (398)
T TIGR00895 106 TQLLILRFLAGLGLGGLMPNLNALVSEYAPKRFRGTAVGLMFCGYPIGAAVGGFLAGWLIPVFGWRSLFYVGGIAPLLLL 185 (398)
T ss_pred HHHHHHHHHHhcccccchhhHHHHHHHHcCHHhhchhHhhHhhHHHHHHHHHHHHHHHHhhcccceeehhhhhhHHHHHH
Confidence 4566677778888888889999999999999999999999999999999999998874 23345556666654444333
Q ss_pred -HHHHhccCC
Q 041759 497 -FFVICLPET 505 (525)
Q Consensus 497 -~~~~~~~~~ 505 (525)
+..++++++
T Consensus 186 ~~~~~~~~~~ 195 (398)
T TIGR00895 186 LLLMRFLPES 195 (398)
T ss_pred HHHHHhCCCC
Confidence 334455554
No 169
>PLN00028 nitrate transmembrane transporter; Provisional
Probab=99.16 E-value=2.4e-09 Score=108.26 Aligned_cols=151 Identities=13% Similarity=0.012 Sum_probs=106.9
Q ss_pred hhhhcccccCChhHHHHHHHHHhcccccccCchhHHHHHHHHHhhcChhHHHHHHHHHHHHHHHHHHhccccccchhHHH
Q 041759 343 GMTLGIENLGFDIYLGVVFNALLEIPNLASTIPSFFLTFFLIQKWNRKSSLLVLFIISGICSIMAVVANDISNAGKRMRI 422 (525)
Q Consensus 343 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~d~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 422 (525)
..+.+.+++|.+..+.+...+...+ +..++.++.|++.||+|||+++..+.++.+++.++..+..+. ...+
T Consensus 58 ~~~~l~~~~gls~~~~g~~~~~~~~----~~~~~~~~~G~l~dr~G~r~~~~~~~~~~~~~~~~~~~~~s~-----~~l~ 128 (476)
T PLN00028 58 LLPIIRDNLNLTKSDIGNAGIASVS----GSIFSRLAMGPVCDLYGPRYGSAFLLMLTAPAVFCMSLVSSA-----TGFI 128 (476)
T ss_pred HHHHHHHHcCCCHHHHHHHHHHHHH----HHHHHHHHHHHHHHHhCChHHHHHHHHHHHHHHHHHHHhcCH-----HHHH
Confidence 3456677889888877776666555 777899999999999999999999888888877766665433 3444
Q ss_pred HHHHHHHHHHHHHHHHHHhhhccccCcchhhhhhHHHHHHHHHHHHHHHHHHhh-----c------cCchhHHHHHHHHH
Q 041759 423 GLELASLFSAYIAYTVIFIYAIELFPTCVRNSATSIMRLAIIFAAIFSSVLVAA-----G------SNNEFVSYGVFGLV 491 (525)
Q Consensus 423 ~~~~~~~~~~~~~~~~~~~~~~~~~p~~~r~~~~~~~~~~~~~g~~~~p~i~~~-----~------~~~~~~~~~~~~~~ 491 (525)
+..++.+++.+.. .....++.|.+|++.|+++.|+.+....+|..+++.+.+. . ..++...|.+.+++
T Consensus 129 ~~r~l~G~~~~~~-~~~~~~i~~~~~~~~rg~a~g~~~~~~~~g~~~~~~~~~~i~~~~~~~~~~~~~gWr~~f~i~g~l 207 (476)
T PLN00028 129 AVRFFIGFSLATF-VSCQYWMSTMFNGKIVGTANGIAAGWGNLGGGVTQLLMPLVFPLIKDAGAPSFTAWRIAFFVPGLL 207 (476)
T ss_pred HHHHHHHHHHHhh-HHHHHHHHHhcChhheeHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcchhhhHHHHHHHHHH
Confidence 5556666665543 3345578899999999999999987777776665544431 1 12567788887777
Q ss_pred HHHHHHHHHhcc
Q 041759 492 IICCGFFVICLP 503 (525)
Q Consensus 492 ~~~~~~~~~~~~ 503 (525)
.++..++.++++
T Consensus 208 ~l~~~l~~~~~~ 219 (476)
T PLN00028 208 HIIMGILVLTLG 219 (476)
T ss_pred HHHHHHHHHHHc
Confidence 766655544443
No 170
>PRK10504 putative transporter; Provisional
Probab=99.14 E-value=2.1e-09 Score=109.04 Aligned_cols=155 Identities=8% Similarity=-0.008 Sum_probs=120.5
Q ss_pred HHHHHHhhhhhcccccCChhHHHHHHHHHhcccccccCchhHHHHHHHHHhhcChhHHHHHHHHHHHHHHHHHHhccccc
Q 041759 336 GIGVVYYGMTLGIENLGFDIYLGVVFNALLEIPNLASTIPSFFLTFFLIQKWNRKSSLLVLFIISGICSIMAVVANDISN 415 (525)
Q Consensus 336 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~d~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~ 415 (525)
.........|.+.+++|.+....+...+...+ +..++.++.|++.||+|||+.+..+..+..++.+......+
T Consensus 25 ~~~~~~~~~p~~~~~~g~s~~~~~~~~~~~~~----~~~~~~~~~g~l~d~~g~r~~~~~~~~~~~~~~~~~~~~~~--- 97 (471)
T PRK10504 25 DTTIVNTALPSMAQSLGESPLHMHMVIVSYVL----TVAVMLPASGWLADRVGVRNIFFTAIVLFTLGSLFCALSGT--- 97 (471)
T ss_pred hHHHHHHHHHHHHHHhCcCHHHHHHHHHHHHH----HHHHHHHHHHHHHHHhchHHHHHHHHHHHHHHHHHHHHhCC---
Confidence 33445556788888899998887777666666 66688999999999999999999888888777766555432
Q ss_pred cchhHHHHHHHHHHHHHHHHHHHHHhhhccccCcchhhhhhHHHHHHHHHHHHHHHHHHhh--ccCchhHHHHHHHHHHH
Q 041759 416 AGKRMRIGLELASLFSAYIAYTVIFIYAIELFPTCVRNSATSIMRLAIIFAAIFSSVLVAA--GSNNEFVSYGVFGLVII 493 (525)
Q Consensus 416 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~r~~~~~~~~~~~~~g~~~~p~i~~~--~~~~~~~~~~~~~~~~~ 493 (525)
....++..++.+++.+...+....++.|.+|++.|+++.++.+....+|..++|.+.+. ...++.+.|.+...+..
T Consensus 98 --~~~l~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~g~l~~~~gw~~~f~~~~~~~~ 175 (471)
T PRK10504 98 --LNELLLARVLQGVGGAMMVPVGRLTVMKIVPREQYMAAMTFVTLPGQVGPLLGPALGGLLVEYASWHWIFLINIPVGI 175 (471)
T ss_pred --HHHHHHHHHHHHhhhHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHhhccHHHHHHHHHHHHH
Confidence 34566777888888888888999999999999999999999999999999999999884 33456667776665555
Q ss_pred HHHHHH
Q 041759 494 CCGFFV 499 (525)
Q Consensus 494 ~~~~~~ 499 (525)
+..+..
T Consensus 176 l~~~~~ 181 (471)
T PRK10504 176 IGAIAT 181 (471)
T ss_pred HHHHHH
Confidence 554443
No 171
>PRK15462 dipeptide/tripeptide permease D; Provisional
Probab=99.14 E-value=1.2e-09 Score=108.53 Aligned_cols=153 Identities=11% Similarity=0.030 Sum_probs=109.2
Q ss_pred HHhhhhhcc-cccCChhHHHHHHHHHhcccccccCchhHHHHHHHHHhh-cChhHHHHHHHHHHHHHHHHHHhccccccc
Q 041759 340 VYYGMTLGI-ENLGFDIYLGVVFNALLEIPNLASTIPSFFLTFFLIQKW-NRKSSLLVLFIISGICSIMAVVANDISNAG 417 (525)
Q Consensus 340 ~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~d~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 417 (525)
....++.++ +++|.+...+..+.+.... ...++.+++|+++||+ |||+.+.++.++..++.+++......
T Consensus 28 ~~~~L~~yL~~~lgls~~~a~~i~~~~~~----~~~l~~ligG~LaDRilGrrr~iliG~il~~lg~lll~~~~~~---- 99 (493)
T PRK15462 28 MRALLILYLTNQLKYDDNHAYELFSAYCS----LVYVTPILGGFLADKVLGNRMAVMLGALLMAIGHVVLGASEIH---- 99 (493)
T ss_pred HHHHHHHHHHHhcCCCHHHHHHHHHHHHH----HHHHHHHHHHHHHHHccCcHHHHHHHHHHHHHHHHHHHHhhcc----
Confidence 333445554 4578888888877777666 6668899999999999 99999999999988887665532211
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHhhhccccCcc--hhhhhhHHHHHHHHHHHHHHHHHHhhc--cCchhHHHHHHHHHHH
Q 041759 418 KRMRIGLELASLFSAYIAYTVIFIYAIELFPTC--VRNSATSIMRLAIIFAAIFSSVLVAAG--SNNEFVSYGVFGLVII 493 (525)
Q Consensus 418 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~--~r~~~~~~~~~~~~~g~~~~p~i~~~~--~~~~~~~~~~~~~~~~ 493 (525)
.....+...+..++.+...+...++..|.+|++ .|.++.++.+...++|+.++|.+.++. ..++...|.+.++..+
T Consensus 100 ~~~~~l~l~li~iG~G~~~~~~~alv~elfp~~~~~R~sgf~i~Y~~~nlG~~iap~l~g~L~~~~Gw~~~F~iaaigm~ 179 (493)
T PRK15462 100 PSFLYLSLAIIVCGYGLFKSNVSCLLGELYEPTDPRRDGGFSLMYAAGNVGSIIAPIACGYAQEEYSWAMGFGLAAVGMI 179 (493)
T ss_pred hhHHHHHHHHHHHhcccccccHHHHHHHHCCCCCccccceehHHHHHHHHHHHHHHHHHHHHHhhhChHHHHHHHHHHHH
Confidence 112233333344555555566778899999875 689999999999999999999999963 3466777777665555
Q ss_pred HHHHHHH
Q 041759 494 CCGFFVI 500 (525)
Q Consensus 494 ~~~~~~~ 500 (525)
++.+.++
T Consensus 180 l~li~~~ 186 (493)
T PRK15462 180 AGLVIFL 186 (493)
T ss_pred HHHHHHH
Confidence 5544443
No 172
>PF05977 MFS_3: Transmembrane secretion effector; InterPro: IPR010290 This family consists of the enterobactin exporter EntS proteins and putative permeases all belonging to the major facilitator superfamily. EntS exports the siderophore enterobactin out of the cell. The genetic locus entS was changed from ybdA so as to reflect its relevant biological function [].
Probab=99.14 E-value=1.7e-09 Score=108.95 Aligned_cols=183 Identities=10% Similarity=0.053 Sum_probs=136.8
Q ss_pred hhhcchhHHHHHHHHHHHHHHHHHHHhhhhhcccccCChhHHHHHHHHHhcccccccCchhHHHHHHHHHhhcChhHHHH
Q 041759 316 ELFVRRWALERTLALMVPGFGIGVVYYGMTLGIENLGFDIYLGVVFNALLEIPNLASTIPSFFLTFFLIQKWNRKSSLLV 395 (525)
Q Consensus 316 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~d~~g~~~~~~~ 395 (525)
..+|+|.++.......+..++..+.....+.+..+...++...+++.....+ -.++.++++|.++||++||++++.
T Consensus 5 aplr~~~Fr~lw~a~~iS~lG~~~~~va~~wlv~~lt~S~~~valv~~a~~L----P~~Llsl~aG~laDr~drrrili~ 80 (524)
T PF05977_consen 5 APLRNRNFRRLWIAQLISNLGDWMQTVALAWLVTQLTGSPLMVALVQAASTL----PILLLSLFAGALADRFDRRRILIL 80 (524)
T ss_pred ccccCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHH----HHHHHHHHHHHHhhcccchHHHHH
Confidence 3477888888777777787777777666676666666677777666666555 444788899999999999999999
Q ss_pred HHHHHHHHHHHHHHhccccccchhHHHHHHHHHHHHHHHHHHHHHhhhccccCcchhhhhhHHHHHHHHHHHHHHHHHHh
Q 041759 396 LFIISGICSIMAVVANDISNAGKRMRIGLELASLFSAYIAYTVIFIYAIELFPTCVRNSATSIMRLAIIFAAIFSSVLVA 475 (525)
Q Consensus 396 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~r~~~~~~~~~~~~~g~~~~p~i~~ 475 (525)
+-++.++..+++.+.......+.+.++++.++.+++.....|...+++.|++|+++...+.++.....++..++||.+.|
T Consensus 81 ~~~~~~~~~~~L~~l~~~~~~~~~~Ll~~~fl~g~~~a~~~PA~~A~ip~lV~~~~L~~A~al~s~~~niar~iGPalgG 160 (524)
T PF05977_consen 81 SQLLRALVALLLAVLAFFGLLSPWLLLILTFLLGIGSAFFNPAWQAIIPELVPKEDLPAANALNSISFNIARIIGPALGG 160 (524)
T ss_pred HHHHHHHHHHHHHHHHHhCcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccHhhHHHHHHHHHHHHHHHHhccchHHH
Confidence 88887766555544322211234567788888889989999999999999999999999999999999999999999998
Q ss_pred h--ccCchhHHHHHHHHHHHHHHHHHHhc
Q 041759 476 A--GSNNEFVSYGVFGLVIICCGFFVICL 502 (525)
Q Consensus 476 ~--~~~~~~~~~~~~~~~~~~~~~~~~~~ 502 (525)
. ...+....|.+-++..++..+.....
T Consensus 161 ~Lva~~G~~~~f~inalsfl~~i~~l~~~ 189 (524)
T PF05977_consen 161 ILVAFFGAAAAFLINALSFLISILALLRW 189 (524)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHc
Confidence 4 33455666666665555544444444
No 173
>TIGR00792 gph sugar (Glycoside-Pentoside-Hexuronide) transporter. GPH:cation symporters catalyze uptake of sugars in symport with a monovalent cation (H+ or Na+). Members of this family includes transporters for melibiose, lactose, raffinose, glucuronides, pentosides and isoprimeverose. Mutants of two groups of these symporters (the melibiose permeases of enteric bacteria, and the lactose permease of Streptococcus thermophilus) have been isolated in which altered cation specificity is observed or in which sugar transport is uncoupled from cation symport (i.e., uniport is catalyzed). The various members of the family can use Na+, H+ or Li, Na+ or Li+, H+ or Li+, or only H+ as the symported cation. All of these proteins possess twelve putative transmembrane a-helical spanners.
Probab=99.14 E-value=2.6e-09 Score=107.34 Aligned_cols=120 Identities=18% Similarity=0.248 Sum_probs=99.8
Q ss_pred hhhhhhhHHHHHHHHHHHhHHhhHhcccccCCchHHHHHHHHHHHHHHHHHHhh-hhHHHHHHHHHHHhhcccchhhhhh
Q 041759 113 SAFIKGLPAASHFTGCLLGIVFLATLADSSLGRKNLLFLSCLTMSVATSLTIFS-NNLWIYSLLRFFSGISRATIGTCTI 191 (525)
Q Consensus 113 s~~~~g~~~s~~~lg~~~~~~~~G~l~dr~~Grk~~~~~~~~~~~i~~~~~~~~-~~~~~l~~~r~l~G~~~~~~~~~~~ 191 (525)
+..+.+++.+...++..++.+++|+++|| +|||+++.++.++.+++.++..+. ++.+.+++..++.|++.+...+...
T Consensus 255 ~~~~~~~~~~~~~i~~ii~~~~~~~l~~r-~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~ 333 (437)
T TIGR00792 255 DPELFSYMGSIAIVAGLIGVLLFPRLVKK-FGRKILFAGGILLMVLGYLIFFFAGSNLPLILVLIILAGFGQNFVTGLVW 333 (437)
T ss_pred ChHHHHHHHHHHHHHHHHHHHHHHHHHHH-hCcHHHHHHHHHHHHHHHHHHHHcchhHHHHHHHHHHHHHHHHHHHHHHH
Confidence 34567778888899999999999999999 999999999998888888777665 4667778888999999999999989
Q ss_pred eeeEeeec-------CcchhhHHhHHHHHHHHHHHHHHHH-HHhccCCch
Q 041759 192 VLLTEKVG-------TEWRGLVGILDSFFFTIGTLTLPAI-AYTNRSSSW 233 (525)
Q Consensus 192 ~~i~~~~~-------~~~r~~~~~~~~~~~~~G~~l~~~l-~~~~~~~~w 233 (525)
++++|..+ ++.+|...++.+....+|..+++.+ +.+++..||
T Consensus 334 ~~~~~~~~~~~~~~~~~~~G~~~~~~~~~~~~g~~lg~~i~g~ll~~~G~ 383 (437)
T TIGR00792 334 ALVADTVDYGEWKTGVRAEGLVYSVRTFVRKLGQALAGFLVGLILGIIGY 383 (437)
T ss_pred HHHhhhhhhhhhhcCccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCC
Confidence 99888765 4567999999999999999999887 555443333
No 174
>PRK11128 putative 3-phenylpropionic acid transporter; Provisional
Probab=99.13 E-value=8.9e-10 Score=108.42 Aligned_cols=140 Identities=12% Similarity=0.019 Sum_probs=116.5
Q ss_pred eeeccccccchhhhhhhHHHHHHHHHHHhHHhhHhcccccCCchHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHhhc
Q 041759 103 IISEWGLECSSAFIKGLPAASHFTGCLLGIVFLATLADSSLGRKNLLFLSCLTMSVATSLTIFSNNLWIYSLLRFFSGIS 182 (525)
Q Consensus 103 i~~~~~~~~~s~~~~g~~~s~~~lg~~~~~~~~G~l~dr~~Grk~~~~~~~~~~~i~~~~~~~~~~~~~l~~~r~l~G~~ 182 (525)
+.+|.|. +..+.|.+.+...++..+..++.|++.|| +|+|+.+..+.++.+++.++.+++++.+.+++..++.|++
T Consensus 231 ~~~~~g~---s~~~~g~~~~~~~~~~~~~~~~~g~l~~r-~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~ 306 (382)
T PRK11128 231 YWQAAGY---SASTIGYLWSLGVVAEVLIFAFSNRLFRR-WSARDLLLLSAICGVVRWGLMGSTTALPWLIVIQILHCGT 306 (382)
T ss_pred HHHHCCC---CHhHHHHHHHHHHHHHHHHHHHHHHHHHH-CCHHHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHH
Confidence 3356888 88899999999999999999999999999 9999999999999999888888899999999999999999
Q ss_pred ccchhhhhheeeEeeecCcchhhHHhHHH-HHHHHHHHHHHHH-HHhccCCchHHHHHHHHHHHHHHH
Q 041759 183 RATIGTCTIVLLTEKVGTEWRGLVGILDS-FFFTIGTLTLPAI-AYTNRSSSWTIIYLWTSIPTLVYS 248 (525)
Q Consensus 183 ~~~~~~~~~~~i~~~~~~~~r~~~~~~~~-~~~~~G~~l~~~l-~~~~~~~~wr~~f~~~~~~~~~~~ 248 (525)
.+...+....++.+. +++++++..+..+ ....+|..+||.+ |.+.+..|+ ..|+..+++.++.+
T Consensus 307 ~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~g~~ig~~i~G~l~~~~g~-~~~~~~~~~~~~~~ 372 (382)
T PRK11128 307 FTVCHLAAMRYIAAR-PGSEVIRLQALYSALAMGGSIAIMTVLSGFLYQHLGA-GVFWVMALVALPAL 372 (382)
T ss_pred HHHHHHHHHHHHHHC-CHhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccH-HHHHHHHHHHHHHH
Confidence 998888888888886 5566788888776 5567788899988 555566677 46666666665544
No 175
>PRK09952 shikimate transporter; Provisional
Probab=99.13 E-value=9.7e-10 Score=110.09 Aligned_cols=152 Identities=16% Similarity=0.166 Sum_probs=109.6
Q ss_pred ceeeccccccchhhhhhhHHHHHHHHHHHhHHhhHhcccccCCchHHHHHHHHHHHHHHHHHHh---h-hhHHHHHHHHH
Q 041759 102 TIISEWGLECSSAFIKGLPAASHFTGCLLGIVFLATLADSSLGRKNLLFLSCLTMSVATSLTIF---S-NNLWIYSLLRF 177 (525)
Q Consensus 102 ~i~~~~~~~~~s~~~~g~~~s~~~lg~~~~~~~~G~l~dr~~Grk~~~~~~~~~~~i~~~~~~~---~-~~~~~l~~~r~ 177 (525)
.+++++|. +......+.....+...++.++.|+++|| +|||+++..+.++..++.+.... . ++.+.+++..+
T Consensus 276 y~~~~~g~---s~~~~~~~~~~~g~~~~i~~~~~g~l~Dr-~grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 351 (438)
T PRK09952 276 YSTQNLGL---PRELFLNIGLLVGGLSCLTIPCFAWLADR-FGRRRVYITGALIGTLSAFPFFMALEAQSIFWIVFFSIM 351 (438)
T ss_pred HHHHhcCC---CHHHHHHHHHHHHHHHHHHHHHHHHHHHH-hCchHHHHHHHHHHHHHHHHHHHHHHcCChHHHHHHHHH
Confidence 34566777 66655555666667778888999999999 99999988887766555433322 2 23455555667
Q ss_pred HHhhcccchhhhhheeeEeeecCcchhhHHhHHH-HHHHHHHHHHHHH-HHhcc--CCchHHHHHHHHHHHHHHHhHhhe
Q 041759 178 FSGISRATIGTCTIVLLTEKVGTEWRGLVGILDS-FFFTIGTLTLPAI-AYTNR--SSSWTIIYLWTSIPTLVYSGLLYI 253 (525)
Q Consensus 178 l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~-~~~~~G~~l~~~l-~~~~~--~~~wr~~f~~~~~~~~~~~~~~~~ 253 (525)
+.|++.+...+...+++.|.+|.+.|+...++.. .+..+|..++|.+ +.+.+ ..+|+..+...++..++.. +..+
T Consensus 352 l~~~~~~~~~~~~~~~~~e~~p~~~r~tg~g~~~~~~~~lgg~~~p~i~g~l~~~~~~~~~~~~~~~~~~~~i~~-v~~~ 430 (438)
T PRK09952 352 LANIAHDMVVCVQQPMFTEMFGASYRYSGAGVGYQVASVVGGGFTPFIAAALVTYFGGSWHSVAIYLLAGCLISA-MTAL 430 (438)
T ss_pred HHHHHHHHHHHHHHHHHHHHCCcchhHHHHhHHHHHHHHHHHHHHHHHHHHHHHhcCCCchHHHHHHHHHHHHHH-HHHH
Confidence 7788888888888899999999999988888744 4455888888987 55544 2358888888777777766 4445
Q ss_pred eecCC
Q 041759 254 FVSES 258 (525)
Q Consensus 254 ~lpes 258 (525)
.++|+
T Consensus 431 ~~~~~ 435 (438)
T PRK09952 431 LMKDN 435 (438)
T ss_pred Hcccc
Confidence 55653
No 176
>PRK11043 putative transporter; Provisional
Probab=99.13 E-value=4.2e-09 Score=104.45 Aligned_cols=152 Identities=11% Similarity=0.017 Sum_probs=115.7
Q ss_pred hhcccccCChhHHHHHHHHHhcccccccCchhHHHHHHHHHhhcChhHHHHHHHHHHHHHHHHHHhccccccchhHHHHH
Q 041759 345 TLGIENLGFDIYLGVVFNALLEIPNLASTIPSFFLTFFLIQKWNRKSSLLVLFIISGICSIMAVVANDISNAGKRMRIGL 424 (525)
Q Consensus 345 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~d~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 424 (525)
+.+.++++.+..+.+...+...+ +..++.++.|+++||+|||+.+..+..+..++.++.....+. ....+.
T Consensus 30 ~~i~~~~~~s~~~~g~~~s~~~~----~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~~~~~~~-----~~l~~~ 100 (401)
T PRK11043 30 KAIQADLQTSASAVSASLSLFLA----GFALGQLLWGPLSDRYGRKPVLLAGLSLFALGSLGMLWVESA-----AQLLVL 100 (401)
T ss_pred HHHHHHHCCCHHHHHHHHHHHHH----HHHHHHHhhhhHHhhcCCcHHHHHHHHHHHHHHHHHHHhcCH-----HHHHHH
Confidence 34566788898888888888877 777999999999999999999999988888777776665433 345555
Q ss_pred HHHHHHHHHHHHHHHHhhhccccCcchhhhhhHHHHHHHHHHHHHHHHHHhh--ccCchhHHHHHHHHHHHHHHHHHHhc
Q 041759 425 ELASLFSAYIAYTVIFIYAIELFPTCVRNSATSIMRLAIIFAAIFSSVLVAA--GSNNEFVSYGVFGLVIICCGFFVICL 502 (525)
Q Consensus 425 ~~~~~~~~~~~~~~~~~~~~~~~p~~~r~~~~~~~~~~~~~g~~~~p~i~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~ 502 (525)
.++.+++.+...+....+..|.+|++.++...+..+....++..++|.+.+. ...++...+.+.+++.++..+..+++
T Consensus 101 ~~l~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~i~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~ 180 (401)
T PRK11043 101 RFVQAVGVCSAAVIWQALVIDRYPAQKANRVFATIMPLVALSPALAPLLGAWLLNHFGWQAIFATLFAITLLLILPTLRL 180 (401)
T ss_pred HHHHHhhhHHHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCChHHHHHHHHHHHHHHHHHHHHc
Confidence 6666677666667777888999999888888888888888899999998874 33456677777766666655555555
Q ss_pred cCC
Q 041759 503 PET 505 (525)
Q Consensus 503 ~~~ 505 (525)
++.
T Consensus 181 ~~~ 183 (401)
T PRK11043 181 KPS 183 (401)
T ss_pred CCC
Confidence 443
No 177
>TIGR00711 efflux_EmrB drug resistance transporter, EmrB/QacA subfamily. This subfamily of drug efflux proteins, a part of the major faciliator family, is predicted to have 14 potential membrane-spanning regions. Members with known activities include EmrB (multiple drug resistance efflux pump) in E. coli, FarB (antibacterial fatty acid resistance) in Neisseria gonorrhoeae, TcmA (tetracenomycin C resistance) in Streptomyces glaucescens, etc. In most cases, the efflux pump is described as having a second component encoded in the same operon, such as EmrA of E. coli.
Probab=99.12 E-value=1.3e-09 Score=111.22 Aligned_cols=162 Identities=15% Similarity=0.118 Sum_probs=127.0
Q ss_pred HHHHHHHhhhhhcccccCChhHHHHHHHHHhcccccccCchhHHHHHHHHHhhcChhHHHHHHHHHHHHHHHHHHhcccc
Q 041759 335 FGIGVVYYGMTLGIENLGFDIYLGVVFNALLEIPNLASTIPSFFLTFFLIQKWNRKSSLLVLFIISGICSIMAVVANDIS 414 (525)
Q Consensus 335 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~d~~g~~~~~~~~~~~~~~~~~~~~~~~~~~ 414 (525)
+.........|.+.+++|.+....+...+...+ +.+++.++.|++.||+|||+.+.++..+..++.++.....+
T Consensus 16 ~~~~~~~~~~p~~~~~~g~s~~~~~~~~~~~~~----~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~~~~~~-- 89 (485)
T TIGR00711 16 LDSTIVNVAIPTIAGDLGSSLSQVQWVITSYML----ANAISIPLTGWLAKRFGTRRLFLISTFAFTLGSLLCGVAPN-- 89 (485)
T ss_pred HHHHHHHHHHHHHHHhcCCChhhhhHHHHHHHH----HHHHHHHhHHHHHHHhCcHHHHHHHHHHHHHHHHHHhCcCC--
Confidence 334555566788888899888887777777777 77799999999999999999999999998888887766543
Q ss_pred ccchhHHHHHHHHHHHHHHHHHHHHHhhhccccCcchhhhhhHHHHHHHHHHHHHHHHHHhh--ccCchhHHHHHHHHHH
Q 041759 415 NAGKRMRIGLELASLFSAYIAYTVIFIYAIELFPTCVRNSATSIMRLAIIFAAIFSSVLVAA--GSNNEFVSYGVFGLVI 492 (525)
Q Consensus 415 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~r~~~~~~~~~~~~~g~~~~p~i~~~--~~~~~~~~~~~~~~~~ 492 (525)
....++..++.+++.+...+...+++.|.+|++.|+++.++......+|..++|.+.+. ...++.+.|++.+.+.
T Consensus 90 ---~~~l~~~~~~~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~~w~~~f~~~~~~~ 166 (485)
T TIGR00711 90 ---LELMIIFRVIQGFGGGPLIPLSFSTLLNIYPPEKRGRAMAIWGLTVLVAPALGPTLGGWIIENYHWRWIFLINVPIG 166 (485)
T ss_pred ---HHHHHHHHHHHHhhhhhHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHhhhhhccHhHhccCcCceehhhhhhHHH
Confidence 34667777888888888889999999999999999999999999999999999999885 3345566666665555
Q ss_pred HHHHHH-HHhccCC
Q 041759 493 ICCGFF-VICLPET 505 (525)
Q Consensus 493 ~~~~~~-~~~~~~~ 505 (525)
++..++ .++.++.
T Consensus 167 ~~~~~~~~~~~~~~ 180 (485)
T TIGR00711 167 IIVVVVAFFILPRD 180 (485)
T ss_pred HHHHHHHHHHcCCc
Confidence 544443 3444543
No 178
>TIGR00885 fucP L-fucose:H+ symporter permease. This family describes the L-fucose permease in bacteria. L-fucose(6-deoxy-L-galactose) is a monosaccharide found in glycoproteins and cell wall polysaccharides. L-fucose is used in bacteria through an inducible pathway mediated by atleast four enzymes: a permease, isomerase, kinase and an aldolase which are encoded by fucP, fucI, fucK, fucA respectively. The fuc genes belong to a regulon comprising of four linked operons: fucO, fucA, fucPIK and fucR. The positive regulator is encoded by fucR, whose protein responds to fuculose-1-phosphate, which acts as an effector.
Probab=99.11 E-value=3.6e-09 Score=104.74 Aligned_cols=133 Identities=8% Similarity=0.019 Sum_probs=110.2
Q ss_pred HHHHHhhhhhcccccCChhHHHHHHHHHhcccccccCchhHHHHHHHHHhhcChhHHHHHHHHHHHHHHHHHHhcccccc
Q 041759 337 IGVVYYGMTLGIENLGFDIYLGVVFNALLEIPNLASTIPSFFLTFFLIQKWNRKSSLLVLFIISGICSIMAVVANDISNA 416 (525)
Q Consensus 337 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~d~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 416 (525)
.+...-..|.+.++++.+..+.+.+.+...+ +..++.+..+++.||+|||+.+.++..+.+++.++....... .
T Consensus 19 ~~~~~~l~~~~~~~~~~s~~~~g~l~s~~~~----g~~i~~~~~g~l~~r~G~r~~~~~g~~l~~~g~~l~~~~~~~--~ 92 (410)
T TIGR00885 19 NDITNPMVPQFQQAFTLTAFQAALVQSAFYG----GYFIMAIPAAIFMKKLSYKAGILLGLFLYALGAFLFWPAAEI--M 92 (410)
T ss_pred HHhHHHHHHHHHHHhCCCHHHHHHHHHHHHH----HHHHHHHHHHHHHHHhCchHHHHHHHHHHHHHHHHHHHHHhh--c
Confidence 3444455677788899999898888888777 888999999999999999999999999999988776544321 1
Q ss_pred chhHHHHHHHHHHHHHHHHHHHHHhhhccccCcchhhhhhHHHHHHHHHHHHHHHHHHh
Q 041759 417 GKRMRIGLELASLFSAYIAYTVIFIYAIELFPTCVRNSATSIMRLAIIFAAIFSSVLVA 475 (525)
Q Consensus 417 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~r~~~~~~~~~~~~~g~~~~p~i~~ 475 (525)
++...++..++.+++.+...+....++.+..|+++|++..++.+....+|..++|.+.+
T Consensus 93 ~~~~~l~~~~l~G~g~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lG~~~g~~i~~ 151 (410)
T TIGR00885 93 NYTLFLVGLFILTAGLGFLETAANPYILVMGPESTATRRLNLAQSFNPFGSIIGMVVAQ 151 (410)
T ss_pred cHHHHHHHHHHHHhhHHHHHhhhhHHHHHHCCHhHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 34566777788889989988888889999999999999999999999999999988876
No 179
>PRK15403 multidrug efflux system protein MdtM; Provisional
Probab=99.11 E-value=3.7e-09 Score=104.98 Aligned_cols=154 Identities=14% Similarity=0.102 Sum_probs=119.1
Q ss_pred hhhcccccCChhHHHHHHHHHhcccccccCchhHHHHHHHHHhhcChhHHHHHHHHHHHHHHHHHHhccccccchhHHHH
Q 041759 344 MTLGIENLGFDIYLGVVFNALLEIPNLASTIPSFFLTFFLIQKWNRKSSLLVLFIISGICSIMAVVANDISNAGKRMRIG 423 (525)
Q Consensus 344 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~d~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 423 (525)
+|...++++.+........+...+ +..++.++.|+++||+|||+++..+..+..++.++.....+. ...++
T Consensus 39 l~~i~~~~~~~~~~~~~~~s~~~~----~~~~~~~~~G~l~dr~Grr~~l~~~~~~~~~~~~~~~~a~~~-----~~l~~ 109 (413)
T PRK15403 39 IINVVRDFNADVSLAPASVSLYLA----GGMALQWLLGPLSDRIGRRPVLITGALIFTLACAATLFTTSM-----TQFLI 109 (413)
T ss_pred HHHHHHHhCCCHHHHHHHHHHHHH----HHHHHHHhhhHHHHHcCchHHHHHHHHHHHHHHHHHHHcCCH-----HHHHH
Confidence 344556778888888888887777 777899999999999999999999988888887777665433 45566
Q ss_pred HHHHHHHHHHHHHHHHHhhhccccCcchhhhhhHHHHHHHHHHHHHHHHHHhh--ccCchhHHHHHHHHHHHHHHHH-HH
Q 041759 424 LELASLFSAYIAYTVIFIYAIELFPTCVRNSATSIMRLAIIFAAIFSSVLVAA--GSNNEFVSYGVFGLVIICCGFF-VI 500 (525)
Q Consensus 424 ~~~~~~~~~~~~~~~~~~~~~~~~p~~~r~~~~~~~~~~~~~g~~~~p~i~~~--~~~~~~~~~~~~~~~~~~~~~~-~~ 500 (525)
.-++.+++.+...+....+..|.+|++.+++.+++.+....+|..++|.+.+. ...++...|.+.+++.+++.+. .+
T Consensus 110 ~r~l~Gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~lg~~l~~~~gw~~~f~~~~~~~~i~~~~~~~ 189 (413)
T PRK15403 110 ARFIQGTSICFIATVGYVTVQEAFGQTKGIKLMAIITSIVLVAPIIGPLSGAALMHFVHWKVLFAIIAVMGLIAFVGLLL 189 (413)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHH
Confidence 66777777666566677888899999999999999999999999999998874 2336777888777776666554 34
Q ss_pred hccCCC
Q 041759 501 CLPETR 506 (525)
Q Consensus 501 ~~~~~~ 506 (525)
.+||++
T Consensus 190 ~lp~~~ 195 (413)
T PRK15403 190 AMPETV 195 (413)
T ss_pred hCCCCc
Confidence 467754
No 180
>PRK03893 putative sialic acid transporter; Provisional
Probab=99.11 E-value=2.9e-09 Score=108.90 Aligned_cols=141 Identities=12% Similarity=0.072 Sum_probs=113.8
Q ss_pred HHHhhhhhcccccCChhHHHHHHHHHhcccccccCchhHHHHHHHHHhhcChhHHHHHHHHHHHHHHHHHHhccccccch
Q 041759 339 VVYYGMTLGIENLGFDIYLGVVFNALLEIPNLASTIPSFFLTFFLIQKWNRKSSLLVLFIISGICSIMAVVANDISNAGK 418 (525)
Q Consensus 339 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~d~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 418 (525)
......+.+.+++|.+....+...+...+ +.+++.++.|++.||+|||+.+..+.++.+++.++..+..+.
T Consensus 38 ~~~~~~~~i~~~~~~s~~~~~~~~~~~~~----~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~~~~~~~----- 108 (496)
T PRK03893 38 LITLVLTEVQGEFGLTTVQAASLISAAFI----SRWFGGLLLGAMGDRYGRRLAMVISIVLFSVGTLACGFAPGY----- 108 (496)
T ss_pred HHHHHHHHHHHHhCCCHHHHHHHHHHHHH----HHHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHHhHH-----
Confidence 33444567777889998888888877777 777999999999999999999999998888888877765443
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHhhhccccCcchhhhhhHHHHHHHHHHHHHHHHHHhh--ccCchhHHHHHH
Q 041759 419 RMRIGLELASLFSAYIAYTVIFIYAIELFPTCVRNSATSIMRLAIIFAAIFSSVLVAA--GSNNEFVSYGVF 488 (525)
Q Consensus 419 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~r~~~~~~~~~~~~~g~~~~p~i~~~--~~~~~~~~~~~~ 488 (525)
...++..++.+++.+..++....++.|.+|++.|+.+.++......+|..++|.+.+. ...++...|.+.
T Consensus 109 ~~l~~~~~l~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~w~~~f~~~ 180 (496)
T PRK03893 109 WTLFIARLVIGMGMAGEYGSSATYVIESWPKHLRNKASGFLISGFSIGAVVAAQVYSLVVPVWGWRALFFIG 180 (496)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCHHHHHHHH
Confidence 4566677788888888888889999999999999999999999999999999998874 233455555543
No 181
>PRK11273 glpT sn-glycerol-3-phosphate transporter; Provisional
Probab=99.11 E-value=1.2e-09 Score=110.03 Aligned_cols=145 Identities=12% Similarity=0.011 Sum_probs=100.2
Q ss_pred ccc-eeeccccccchhhhhhhHHHHHHHHHHHhHHhhHhcccccC--CchHHH-HHHHHHHHHHHHHHHh--hhhHHHHH
Q 041759 100 ALT-IISEWGLECSSAFIKGLPAASHFTGCLLGIVFLATLADSSL--GRKNLL-FLSCLTMSVATSLTIF--SNNLWIYS 173 (525)
Q Consensus 100 ~~~-i~~~~~~~~~s~~~~g~~~s~~~lg~~~~~~~~G~l~dr~~--Grk~~~-~~~~~~~~i~~~~~~~--~~~~~~l~ 173 (525)
+|. +++++|. +..+.++....+.++..++.++.|+++|| + |||+.. .....+..++.++..+ ..+.+...
T Consensus 276 ~P~~l~~~~g~---s~~~~~~~~~~~~~~~~~g~~~~G~l~dr-~~~~r~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~ 351 (452)
T PRK11273 276 SPTYLKEVKHF---ALDKSSWAYFLYEYAGIPGTLLCGWMSDK-VFRGNRGATGVFFMTLVTIATIVYWLNPAGNPTVDM 351 (452)
T ss_pred HHHHHHHhcCC---CHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HccCCcchHHHHHHHHHHHHHHHHHHhcccChHHHH
Confidence 344 4455788 88889999999999999999999999999 8 555432 2222333333333222 23455555
Q ss_pred HHHHHHhhcccchhhhhheeeEeeecCcchhhHHhHHHHHHHHHHHH-HHHH-HHhccCCchHHHHHHHHHHHHHHH
Q 041759 174 LLRFFSGISRATIGTCTIVLLTEKVGTEWRGLVGILDSFFFTIGTLT-LPAI-AYTNRSSSWTIIYLWTSIPTLVYS 248 (525)
Q Consensus 174 ~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~l-~~~l-~~~~~~~~wr~~f~~~~~~~~~~~ 248 (525)
+..++.|.+..........+..|.+|++.||++.++.+....+|..+ +|.+ +.+.+..||+..|++.++.+++..
T Consensus 352 ~~~~~~g~~~~~~~~~~~~~~~~~~p~~~~g~~~g~~~~~~~~g~~~~g~~v~g~l~~~~g~~~~f~~~~~~~~~~~ 428 (452)
T PRK11273 352 ACMIVIGFLIYGPVMLIGLHALELAPKKAAGTAAGFTGLFGYLGGSVAASAIVGYTVDFFGWDGGFMVMIGGSILAV 428 (452)
T ss_pred HHHHHHHHHHHhHHHHHHHHHHHHcChhhhhhHHHHHHHHHHHHHHHhhhhhHHHHHHHhcchHHHHHHHHHHHHHH
Confidence 55566665443323333345679999999999999999888887654 7776 677777899999998887777665
No 182
>TIGR00882 2A0105 oligosaccharide:H+ symporter.
Probab=99.10 E-value=8.7e-10 Score=109.12 Aligned_cols=137 Identities=13% Similarity=0.130 Sum_probs=116.4
Q ss_pred hhhhhhhHHHHHHHHHHHhHHhhHhcccccCCchHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHhhcccchhhhhhe
Q 041759 113 SAFIKGLPAASHFTGCLLGIVFLATLADSSLGRKNLLFLSCLTMSVATSLTIFSNNLWIYSLLRFFSGISRATIGTCTIV 192 (525)
Q Consensus 113 s~~~~g~~~s~~~lg~~~~~~~~G~l~dr~~Grk~~~~~~~~~~~i~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~ 192 (525)
+....|.+.++..+...++.++.|++.|| +|||+.+.++.++.+++..+...+++.+.+++.+++.|++.+........
T Consensus 252 ~~~~~g~~~~~~~i~~~~~~~~~g~l~~r-~g~~~~l~~~~~l~~l~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~ 330 (396)
T TIGR00882 252 GTRVFGYVTTMGELLNALIMFCAPLIINR-IGAKNALLIAGTIMSVRIIGSSFATTALEVVILKMLHAFEVPFLLVGCFK 330 (396)
T ss_pred chHHHHHHHHHHHHHHHHHHHHHHHHHHH-hccchhHHHHHHHHHHHHHHHHhcCChHHHHHHHHHHHHHHHHHHHHHHH
Confidence 55677889999999999999999999999 99999999999999998888788899999999999999998766666666
Q ss_pred eeEeeecCcchhhHHhH-HHHHHHHHHHHHHHH-HHhccCCchHHHHHHHHHHHHHHHhH
Q 041759 193 LLTEKVGTEWRGLVGIL-DSFFFTIGTLTLPAI-AYTNRSSSWTIIYLWTSIPTLVYSGL 250 (525)
Q Consensus 193 ~i~~~~~~~~r~~~~~~-~~~~~~~G~~l~~~l-~~~~~~~~wr~~f~~~~~~~~~~~~~ 250 (525)
++.+..+++.++...+. .+....+|.++++.+ |.+.+..||+..|.+.++..++..++
T Consensus 331 ~~~~~~~~~~~at~~~~~~~~~~~lg~~~~~~l~G~l~~~~G~~~~f~~~~~~~~i~~~~ 390 (396)
T TIGR00882 331 YITSQFDVRLSATIYLIGFQFAKQLAMIFLSTLAGNMYDSIGFQGAYLVLGCIVLLFTLI 390 (396)
T ss_pred HHHHhCCcceEEEeehHHHHHHHHHHHHHHHHhHHHHHHhcccHHHHHHHHHHHHHHHHH
Confidence 77777787777776665 678889999999988 66667789999999998888777633
No 183
>TIGR00712 glpT glycerol-3-phosphate transporter. This model describes a very hydrophobic protein, predicted to span the membrane at least 8 times. The two members confirmed experimentally as glycerol-3-phosphate transporters, from E. coli and B. subtilis, share more than 50 % amino acid identity. Proteins of the hexose phosphate and phosphoglycerate transport systems are also quite similar.
Probab=99.09 E-value=2.1e-09 Score=107.87 Aligned_cols=157 Identities=13% Similarity=0.021 Sum_probs=114.9
Q ss_pred hhhhcccccCChhHHHHHHHHHhcccccccCchhHHHHHHHHHhhcChhHHHHHHHHHHHHHHHHHHhccccccchhHHH
Q 041759 343 GMTLGIENLGFDIYLGVVFNALLEIPNLASTIPSFFLTFFLIQKWNRKSSLLVLFIISGICSIMAVVANDISNAGKRMRI 422 (525)
Q Consensus 343 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~d~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 422 (525)
..|++.+ .|.+..+.+...+...+ +..++.++.|++.||+|||+.+..+.++.+++.++....+.. ..+.....
T Consensus 49 ~~p~~~~-~g~s~~~~g~~~~~~~~----~~~~~~~~~G~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~l~ 122 (438)
T TIGR00712 49 AMPYLVE-QGFSKGELGFALSAISI----AYGFSKFIMGSVSDRSNPRVFLPAGLILSAAVMLLMGFVPWA-TSSIAIMF 122 (438)
T ss_pred hhHHHHH-cCCCHhHhHHHHHHHHH----HHHHhhhccchhhhccCCceehHHHHHHHHHHHHHHhccccc-cchHHHHH
Confidence 3455444 58888888888887777 777899999999999999999999888888887766554321 01233444
Q ss_pred HHHHHHHHHHHHHHHHHHhhhccccCcchhhhhhHHHHHHHHHHHHHHHHHHhh--c-cCchhHHHHHHHHHHHHHHH-H
Q 041759 423 GLELASLFSAYIAYTVIFIYAIELFPTCVRNSATSIMRLAIIFAAIFSSVLVAA--G-SNNEFVSYGVFGLVIICCGF-F 498 (525)
Q Consensus 423 ~~~~~~~~~~~~~~~~~~~~~~~~~p~~~r~~~~~~~~~~~~~g~~~~p~i~~~--~-~~~~~~~~~~~~~~~~~~~~-~ 498 (525)
+..++.+++.+..++.....+.|.+|+++|++++++.+....+|+.++|.+.+. . ..++...|++.+++.++..+ .
T Consensus 123 ~~~~l~g~~~g~~~~~~~~~i~~~~~~~~rg~~~~~~~~~~~~g~~~~~~l~~~~~~~~~~w~~~f~~~~~~~~i~~~~~ 202 (438)
T TIGR00712 123 VLLFLNGWFQGMGWPPCGRTMVHWWSQSERGTIVSIWNCAHNIGGGIPPLLVLLGMAWFNDWHAALYFPAICAIIVALFA 202 (438)
T ss_pred HHHHHHHHHhhcchHHHHHHHHHhcCcccchhHHHHHHHHHHhHhHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHH
Confidence 556667777777778788888999999999999999999999999888876652 2 23566777777776665443 3
Q ss_pred HHhccCC
Q 041759 499 VICLPET 505 (525)
Q Consensus 499 ~~~~~~~ 505 (525)
.++++|.
T Consensus 203 ~~~~~~~ 209 (438)
T TIGR00712 203 FAMMRDT 209 (438)
T ss_pred HHhccCC
Confidence 4445553
No 184
>TIGR00881 2A0104 phosphoglycerate transporter family protein.
Probab=99.09 E-value=4.2e-10 Score=110.59 Aligned_cols=156 Identities=12% Similarity=0.039 Sum_probs=121.0
Q ss_pred HHhhhhhcccccCChhHHHHHHHHHhcccccccCchhHHHHHHHHHhhcChhHHHHHHHHHHHHHHHHHHhccccccchh
Q 041759 340 VYYGMTLGIENLGFDIYLGVVFNALLEIPNLASTIPSFFLTFFLIQKWNRKSSLLVLFIISGICSIMAVVANDISNAGKR 419 (525)
Q Consensus 340 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~d~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 419 (525)
.....|.+.+++|.+..+.+.+.+...+ +..++.++.|+++||+|||+.+..+.++..++.++..+..+. .
T Consensus 14 ~~~~~~~~~~~~g~s~~~~g~~~~~~~~----~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~~~~~~~-----~ 84 (379)
T TIGR00881 14 FALAMPYLVEEIGLSKTDLGLLLSSFSI----AYGISKFVMGSVSDRSNPRVFLPIGLILCAIVNLFFGFSTSL-----W 84 (379)
T ss_pred hhhhhHHHHHHhCCCHhHHHHHHHHHHH----HHHhhhhhhhHHHHhhCCeehhHHHHHHHHHHHHHHHHhhhH-----H
Confidence 3444577777889998888888888777 777899999999999999999999999998888887776543 4
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhhccccCcchhhhhhHHHHHHHHHHHHHHHH-HHhh--ccCchhHHHHHHHHHHHHHH
Q 041759 420 MRIGLELASLFSAYIAYTVIFIYAIELFPTCVRNSATSIMRLAIIFAAIFSSV-LVAA--GSNNEFVSYGVFGLVIICCG 496 (525)
Q Consensus 420 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~r~~~~~~~~~~~~~g~~~~p~-i~~~--~~~~~~~~~~~~~~~~~~~~ 496 (525)
..++..++.+++.+...+...+++.|.+|+++|+++.++.+....+|..++|. +.+. ...++...+.+.+++.++..
T Consensus 85 ~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 164 (379)
T TIGR00881 85 VMAALWALNGIFQGMGWPPCGRTVTKWFSRSERGTWVSFWNCSHNVGGGLLPPLVLFGIAELYSWHWVFIVPGIIAIIVS 164 (379)
T ss_pred HHHHHHHHHHhhccccCCchHHHHHHhcCHhhheeeEeehhccchhHHHHHHHHHHHHHHhcCCchhHHHHHHHHHHHHH
Confidence 56667777788888888899999999999999999999999999999999994 4432 23345566766666555544
Q ss_pred HH-HHhccC
Q 041759 497 FF-VICLPE 504 (525)
Q Consensus 497 ~~-~~~~~~ 504 (525)
++ .++.++
T Consensus 165 ~~~~~~~~~ 173 (379)
T TIGR00881 165 LICFLLLRD 173 (379)
T ss_pred HHHheeeCC
Confidence 33 334444
No 185
>PRK14995 methyl viologen resistance protein SmvA; Provisional
Probab=99.09 E-value=6.3e-09 Score=105.94 Aligned_cols=159 Identities=11% Similarity=-0.047 Sum_probs=122.5
Q ss_pred HHHHhhhhhcccccCChhHHHHHHHHHhcccccccCchhHHHHHHHHHhhcChhHHHHHHHHHHHHHHHHHHhccccccc
Q 041759 338 GVVYYGMTLGIENLGFDIYLGVVFNALLEIPNLASTIPSFFLTFFLIQKWNRKSSLLVLFIISGICSIMAVVANDISNAG 417 (525)
Q Consensus 338 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~d~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 417 (525)
......+|.+.+++|.+..+.....+...+ +...+.+..|+++||+|||+.+.++..+..++.++....++.
T Consensus 23 tiv~~a~p~i~~~l~~s~~~~~~~~~~~~l----~~~~~~~~~G~l~D~~Grk~~l~~~~~~~~~~~~~~~~a~~~---- 94 (495)
T PRK14995 23 TVLHVAAPTLSMTLGASGNELLWIIDIYSL----VMAGMVLPMGALGDRIGFKRLLMLGGTLFGLASLAAAFSPTA---- 94 (495)
T ss_pred HHHHHHHHHHHHHhCCCHhHHHHHHHHHHH----HHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHcCCH----
Confidence 455566788888888888777777776666 666788899999999999999999999999998888776544
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHhhhcccc-CcchhhhhhHHHHHHHHHHHHHHHHHHhh--ccCchhHHHHHHHHHHHH
Q 041759 418 KRMRIGLELASLFSAYIAYTVIFIYAIELF-PTCVRNSATSIMRLAIIFAAIFSSVLVAA--GSNNEFVSYGVFGLVIIC 494 (525)
Q Consensus 418 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-p~~~r~~~~~~~~~~~~~g~~~~p~i~~~--~~~~~~~~~~~~~~~~~~ 494 (525)
...++.-++.+++.+...+.....+.+.+ |+++|+++.|+......+|..++|.+.+. ...++.+.|++...+.++
T Consensus 95 -~~li~~r~l~G~g~~~~~~~~~~~l~~~~~~~~~r~~~~g~~~~~~~~g~~~gp~lgg~l~~~~gwr~~f~i~~~~~~~ 173 (495)
T PRK14995 95 -SWLIATRALLAIGAAMIVPATLAGIRATFTEEKQRNMALGVWAAVGSGGAAFGPLVGGILLEHFYWGSVFLINVPIVLV 173 (495)
T ss_pred -HHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCChHHHHHHHHHHHHH
Confidence 45666777888888887777777666655 77899999999999999999999999985 334567777776655555
Q ss_pred HHHH-HHhccCC
Q 041759 495 CGFF-VICLPET 505 (525)
Q Consensus 495 ~~~~-~~~~~~~ 505 (525)
..++ .+++|+.
T Consensus 174 ~~~l~~~~l~~~ 185 (495)
T PRK14995 174 VMGLTARYVPRQ 185 (495)
T ss_pred HHHHHHHhCCCC
Confidence 5443 3445554
No 186
>PRK15402 multidrug efflux system translocase MdfA; Provisional
Probab=99.08 E-value=5.4e-09 Score=103.88 Aligned_cols=155 Identities=15% Similarity=0.053 Sum_probs=117.3
Q ss_pred hhhhcccccCChhHHHHHHHHHhcccccccCchhHHHHHHHHHhhcChhHHHHHHHHHHHHHHHHHHhccccccchhHHH
Q 041759 343 GMTLGIENLGFDIYLGVVFNALLEIPNLASTIPSFFLTFFLIQKWNRKSSLLVLFIISGICSIMAVVANDISNAGKRMRI 422 (525)
Q Consensus 343 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~d~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 422 (525)
.++.+.++++.+....+...+...+ +..++.++.|+++||+|||+.+.++..+..++.+......+. ...+
T Consensus 35 ~~~~~~~~~~~s~~~~~~~~~~~~~----~~~~~~~~~G~l~dr~g~r~~l~~~~~~~~~~~~~~~~~~~~-----~~l~ 105 (406)
T PRK15402 35 GMLAVVEDFNAGAEWVPTSMTAYLA----GGMFLQWLLGPLSDRIGRRPVMLAGVAFFILTCLAILLAQSI-----EQFT 105 (406)
T ss_pred chHHHHHHhCCCHHHHHHHHHHHHH----HHHHHHHHHHHHHHHhCChHHHHHHHHHHHHHHHHHHHHccH-----HHHH
Confidence 3455667788888888777777777 777899999999999999999999988888887776665433 3555
Q ss_pred HHHHHHHHHHHHHHHHHHhhhccccCcchhhhhhHHHHHHHHHHHHHHHHHHhh--ccCchhHHHHHHHHHHHHHHHHH-
Q 041759 423 GLELASLFSAYIAYTVIFIYAIELFPTCVRNSATSIMRLAIIFAAIFSSVLVAA--GSNNEFVSYGVFGLVIICCGFFV- 499 (525)
Q Consensus 423 ~~~~~~~~~~~~~~~~~~~~~~~~~p~~~r~~~~~~~~~~~~~g~~~~p~i~~~--~~~~~~~~~~~~~~~~~~~~~~~- 499 (525)
+..++.+.+.+...+.......|.+|++.|.+..++......++..++|.+.+. ...++...+.+.+++.++..+..
T Consensus 106 ~~~~l~G~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~g~~i~~~l~~~~~w~~~~~~~~~~~~~~~~~~~ 185 (406)
T PRK15402 106 LLRFLQGIGLCFIGAVGYAAIQESFEEADAIKITALMANVALLAPLLGPLVGAALIHVLPWRGMFVLFAALAALSFFGLW 185 (406)
T ss_pred HHHHHHHhHhhhHHHHHHHHHHHHhChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccCccHHHHHHHHHHHHHHHHHH
Confidence 666777777777777888889999999999999998888888888899988774 33456677777776666555433
Q ss_pred HhccCCC
Q 041759 500 ICLPETR 506 (525)
Q Consensus 500 ~~~~~~~ 506 (525)
+..||++
T Consensus 186 ~~~~~~~ 192 (406)
T PRK15402 186 RAMPETA 192 (406)
T ss_pred HhCCCCC
Confidence 4456554
No 187
>PRK15034 nitrate/nitrite transport protein NarU; Provisional
Probab=99.07 E-value=1.4e-08 Score=99.88 Aligned_cols=115 Identities=15% Similarity=0.028 Sum_probs=90.4
Q ss_pred ccCChhHHHHHHHHHhcccccccCchhHHHHHHHHHhhcChhHHHHHHHHHHHHHHHHHHhccccccchhHHHHHHHHHH
Q 041759 350 NLGFDIYLGVVFNALLEIPNLASTIPSFFLTFFLIQKWNRKSSLLVLFIISGICSIMAVVANDISNAGKRMRIGLELASL 429 (525)
Q Consensus 350 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~d~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 429 (525)
+++++..+.+.+.++..+ +..++++..|++.||+|.|+++.++.++..+..+...+......+++...++..++.+
T Consensus 64 ~~~ls~~q~g~l~ai~~l----~~al~rip~G~l~Dr~G~R~v~~~~~ll~~i~~~~~~~a~~~~~~s~~~lli~r~l~G 139 (462)
T PRK15034 64 GFNFTTDQLFLLTALPSV----SGALLRVPYSFMVPIFGGRRWTVFSTAILIIPCVWLGIAVQNPNTPFGIFIVIALLCG 139 (462)
T ss_pred hcCCCHHHHHHHHHHHHH----HHHHHHHHHHHHHHHhCChHHHHHHHHHHHHHHHHHHHHHcccCCCHHHHHHHHHHHH
Confidence 688998888888887777 6667888889999999999999999999888888777652111123456777777777
Q ss_pred HHHHHHHHHHHhhhccccCcchhhhhhHHHHHHHHHHHHH
Q 041759 430 FSAYIAYTVIFIYAIELFPTCVRNSATSIMRLAIIFAAIF 469 (525)
Q Consensus 430 ~~~~~~~~~~~~~~~~~~p~~~r~~~~~~~~~~~~~g~~~ 469 (525)
++ +..++.....+++.+|+++||++.|+....+++|..+
T Consensus 140 ig-g~~f~~~~~~vs~wfp~~~rG~A~Gi~~g~G~~G~~l 178 (462)
T PRK15034 140 FA-GANFASSMGNISFFFPKAKQGSALGINGGLGNLGVSV 178 (462)
T ss_pred HH-HHhHHHHHHHHHHHCCHhHhHHHHHHHHHHHhhHHHH
Confidence 76 6788888899999999999999999997666555543
No 188
>TIGR00898 2A0119 cation transport protein.
Probab=99.07 E-value=1.4e-09 Score=111.33 Aligned_cols=135 Identities=19% Similarity=0.118 Sum_probs=111.6
Q ss_pred HHHHHHHHHhHHhhHhcccccCCchHHHHHHHHHHHHHHHHHHhhhhH--HHHHHHHHHHhhcccchhhhhheeeEeeec
Q 041759 122 ASHFTGCLLGIVFLATLADSSLGRKNLLFLSCLTMSVATSLTIFSNNL--WIYSLLRFFSGISRATIGTCTIVLLTEKVG 199 (525)
Q Consensus 122 s~~~lg~~~~~~~~G~l~dr~~Grk~~~~~~~~~~~i~~~~~~~~~~~--~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~ 199 (525)
....+....+.++.+++.|| +|||+.+.++.++.+++.++..+.++. +..++.-++.+++.+...+....+..|.+|
T Consensus 362 ~~~~~~~i~~~~~~~~l~dr-~grr~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p 440 (505)
T TIGR00898 362 FISGLVELPAKLITLLLIDR-LGRRYTMAASLLLAGVALLLLLFVPVDLYFLRTALAVLGKFGITSAFQMVYLYTAELYP 440 (505)
T ss_pred HHHHHHHHHHHHHHHHHHHH-hCCHHHHHHHHHHHHHHHHHHHHcCCCchHHHHHHHHHHHHHHHHHHHHHHHHhccccc
Confidence 44556777888999999999 999999999999999988888776543 555666677777777788888999999999
Q ss_pred CcchhhHHhHHHHHHHHHHHHHHHHHHhccCCchHHHHHHHHHHHHHHHhHhheeecCCc
Q 041759 200 TEWRGLVGILDSFFFTIGTLTLPAIAYTNRSSSWTIIYLWTSIPTLVYSGLLYIFVSESP 259 (525)
Q Consensus 200 ~~~r~~~~~~~~~~~~~G~~l~~~l~~~~~~~~wr~~f~~~~~~~~~~~~~~~~~lpesp 259 (525)
.+.|++++++.+....+|.+++|.+.. +...++..++++.++..++.. +..+++||+.
T Consensus 441 ~~~r~~~~g~~~~~~~ig~~i~p~i~~-~~~~~~~~~~~~~~~~~~~~~-~~~~~lpet~ 498 (505)
T TIGR00898 441 TVVRNLGVGVCSTMARVGSIISPFLVY-LGEKWLFLPLVLFGGLALLAG-ILTLFLPETK 498 (505)
T ss_pred HHHHhhhHhHHHHHHHHHHHHHhHHHH-HHHHHHhhHHHHHHHHHHHHH-HHHHcCcCCC
Confidence 999999999999999999999999866 555577788888888887776 5566788864
No 189
>PRK11102 bicyclomycin/multidrug efflux system; Provisional
Probab=99.07 E-value=3e-09 Score=104.64 Aligned_cols=155 Identities=14% Similarity=0.122 Sum_probs=122.3
Q ss_pred hhhhhcccccCChhHHHHHHHHHhcccccccCchhHHHHHHHHHhhcChhHHHHHHHHHHHHHHHHHHhccccccchhHH
Q 041759 342 YGMTLGIENLGFDIYLGVVFNALLEIPNLASTIPSFFLTFFLIQKWNRKSSLLVLFIISGICSIMAVVANDISNAGKRMR 421 (525)
Q Consensus 342 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~d~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 421 (525)
-.+|.+.+++|.+..+.+...+...+ +..++.++.|++.||+|||+.+..+.++..++.++.....+. ...
T Consensus 12 p~~~~~~~~~~~s~~~~~~~~~~~~~----~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~i~~~~~~~~~~~-----~~~ 82 (377)
T PRK11102 12 PALPVIAADFGVSAGSVQMTLSAYIL----GFAIGQLFYGPMADSFGRKPVILGGTLVFALAAVACALAQTI-----DQL 82 (377)
T ss_pred ccHHHHHHHhCCCHHHHHHHHHHHHH----HHHHHHHhhchHHhhcCChHHHHHHHHHHHHHHHHHHHHccH-----HHH
Confidence 34466677888998888888887777 777999999999999999999999999988888887765443 355
Q ss_pred HHHHHHHHHHHHHHHHHHHhhhccccCcchhhhhhHHHHHHHHHHHHHHHHHHhh--ccCchhHHHHHHHHHHHHHHHH-
Q 041759 422 IGLELASLFSAYIAYTVIFIYAIELFPTCVRNSATSIMRLAIIFAAIFSSVLVAA--GSNNEFVSYGVFGLVIICCGFF- 498 (525)
Q Consensus 422 ~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~r~~~~~~~~~~~~~g~~~~p~i~~~--~~~~~~~~~~~~~~~~~~~~~~- 498 (525)
.+..++.+++.+...+....++.|.+|+++|+++.++.+....+|..++|.+.+. ...++...+.+.+++.++..+.
T Consensus 83 ~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~ 162 (377)
T PRK11102 83 IYMRFLHGLAAAAASVVINALMRDMFPKEEFSRMMSFVTLVMTIAPLLAPIIGGWLLVWFSWHAIFWVLALAAILAAALV 162 (377)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcChHHHHHHHHHHHHHHHHHH
Confidence 6667777888888888888999999999999999999999999999999998874 2235566777766666555443
Q ss_pred HHhccCC
Q 041759 499 VICLPET 505 (525)
Q Consensus 499 ~~~~~~~ 505 (525)
.+.++|+
T Consensus 163 ~~~~~~~ 169 (377)
T PRK11102 163 FFFIPET 169 (377)
T ss_pred HHhCCcc
Confidence 3455654
No 190
>PRK11652 emrD multidrug resistance protein D; Provisional
Probab=99.05 E-value=1.3e-08 Score=100.71 Aligned_cols=154 Identities=14% Similarity=0.092 Sum_probs=116.9
Q ss_pred hhhcccccCChhHHHHHHHHHhcccccccCchhHHHHHHHHHhhcChhHHHHHHHHHHHHHHHHHHhccccccchhHHHH
Q 041759 344 MTLGIENLGFDIYLGVVFNALLEIPNLASTIPSFFLTFFLIQKWNRKSSLLVLFIISGICSIMAVVANDISNAGKRMRIG 423 (525)
Q Consensus 344 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~d~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 423 (525)
+|.+.++++.+....+...+...+ +.+++.++.|+++||+|||+.+..+..+..++.++....++. ...++
T Consensus 31 ~~~i~~~~~~s~~~~~~~~~~~~~----~~~~~~~~~G~l~Dr~grr~~~~~~~~~~~~~~~~~~~~~~~-----~~l~~ 101 (394)
T PRK11652 31 IADMARDLNVREGAVQAVMAAYLL----TYGLSQLFYGPLSDRVGRRPVILVGMSIFILGTLVALFAHSL-----TVLIA 101 (394)
T ss_pred HHHHHHHhCCCHHHHHHHHHHHHH----HHHHHHHhhhhHHHhcCChHHHHHHHHHHHHHHHHHHHHccH-----HHHHH
Confidence 466778889998888888887777 777899999999999999999999988888887776654333 35566
Q ss_pred HHHHHHHHHHHHHHHHHhhhccccCcchhhhhhHHHHHHHHHHHHHHHHHHhh--ccCchhHHHHHHHHHHHHHHH-HHH
Q 041759 424 LELASLFSAYIAYTVIFIYAIELFPTCVRNSATSIMRLAIIFAAIFSSVLVAA--GSNNEFVSYGVFGLVIICCGF-FVI 500 (525)
Q Consensus 424 ~~~~~~~~~~~~~~~~~~~~~~~~p~~~r~~~~~~~~~~~~~g~~~~p~i~~~--~~~~~~~~~~~~~~~~~~~~~-~~~ 500 (525)
..++.+++.+...+....+..|.++.+.++.+.++.+....++..++|.+.+. ...++...+.+.++..++..+ ..+
T Consensus 102 ~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~i~~~l~~~~g~~~~f~~~~~~~~~~~~~~~~ 181 (394)
T PRK11652 102 ASAIQGLGTGVGGVMARTLPRDLYEGTQLRHANSLLNMGILVSPLLAPLIGGLLTTLFGWRACYLFLLLLGAGVTFSMAR 181 (394)
T ss_pred HHHHHHhhhhHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccChHHHHHHHHHHHHHHHHHHHH
Confidence 66777777777677777888898998889999999888888899999988874 233566677766655544433 344
Q ss_pred hccCCC
Q 041759 501 CLPETR 506 (525)
Q Consensus 501 ~~~~~~ 506 (525)
+.||++
T Consensus 182 ~~~~~~ 187 (394)
T PRK11652 182 WMPETR 187 (394)
T ss_pred hCCccC
Confidence 556643
No 191
>PRK09584 tppB putative tripeptide transporter permease; Reviewed
Probab=99.04 E-value=6.2e-09 Score=105.68 Aligned_cols=173 Identities=9% Similarity=-0.044 Sum_probs=113.2
Q ss_pred hhhcchh-HHHHHHHHHHHHHHHHHHHhhhhhc-ccccCChhHHHHHHHHHhcccccccCchhHHHHHHHHHh-hcChhH
Q 041759 316 ELFVRRW-ALERTLALMVPGFGIGVVYYGMTLG-IENLGFDIYLGVVFNALLEIPNLASTIPSFFLTFFLIQK-WNRKSS 392 (525)
Q Consensus 316 ~l~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~d~-~g~~~~ 392 (525)
+.+++|+ ++......+...++.......++.+ .+++|.+........+.... ......+++|++.|| +|||+.
T Consensus 15 ~~~~~p~~~~~~~~~~~~~~~~~y~~~~~l~~yl~~~lg~s~~~a~~~~~~~~~----~~~~~~~~~G~LaDr~~G~r~~ 90 (500)
T PRK09584 15 NAFKQPKAFYLIFSIELWERFGYYGLQGIMAVYLVKQLGMSEADSITLFSSFSA----LVYGLVAIGGWLGDKVLGTKRV 90 (500)
T ss_pred hhhcCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHH----HHHHHHHHHHHHHHhccchHHH
Confidence 4456664 3333333344444433333334444 46688887766655544333 222344688999999 599999
Q ss_pred HHHHHHHHHHHHHHHHHhccccccchhHHHHHHHHHHHHHHHHHHHHHhhhccccCcch--hhhhhHHHHHHHHHHHHHH
Q 041759 393 LLVLFIISGICSIMAVVANDISNAGKRMRIGLELASLFSAYIAYTVIFIYAIELFPTCV--RNSATSIMRLAIIFAAIFS 470 (525)
Q Consensus 393 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~--r~~~~~~~~~~~~~g~~~~ 470 (525)
+.++.++..++..++.+.... +....+...+.+++.+...+...++..|.+|++. |..+.++.+...++|..++
T Consensus 91 ~~~g~~~~~ig~~l~~~~~~~----~~~l~~~~~l~gig~g~~~~~~~~l~~~~f~~~~~~~~~~~~~~~~~~~iG~~~g 166 (500)
T PRK09584 91 IMLGAIVLAIGYALVAWSGHD----AGIVYMGMATIAVGNGLFKANPSSLLSTCYEKDDPRLDGAFTMYYMSINIGSFFS 166 (500)
T ss_pred HHHHHHHHHHHHHHHHHhccc----HHHHHHHHHHHHHhhhcccCCHHHHHHHhcCCCchhhhhcchHHHHHHHHHHHHH
Confidence 999999998887777664332 2234445566677777777788889999998643 4467888888899999999
Q ss_pred HHHHhh--ccCchhHHHHHHHHHHHHHH
Q 041759 471 SVLVAA--GSNNEFVSYGVFGLVIICCG 496 (525)
Q Consensus 471 p~i~~~--~~~~~~~~~~~~~~~~~~~~ 496 (525)
|.+.++ ...++...|.+.++..+++.
T Consensus 167 p~i~g~l~~~~g~~~~F~i~~i~~~i~~ 194 (500)
T PRK09584 167 MLATPWLAAKYGWSVAFALSVVGMLITV 194 (500)
T ss_pred HHHHHHHHHhhCHHHHHHHHHHHHHHHH
Confidence 999985 33466777777665444443
No 192
>TIGR00886 2A0108 nitrite extrusion protein (nitrite facilitator).
Probab=99.04 E-value=7.6e-09 Score=101.29 Aligned_cols=124 Identities=11% Similarity=0.064 Sum_probs=96.1
Q ss_pred hhhh-hcccccCChhHHHHHHHHHhcccccccCchhHHHHHHHHHhhcChhHHHHHHHHHHHHHHHHHHhc-cccccchh
Q 041759 342 YGMT-LGIENLGFDIYLGVVFNALLEIPNLASTIPSFFLTFFLIQKWNRKSSLLVLFIISGICSIMAVVAN-DISNAGKR 419 (525)
Q Consensus 342 ~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~d~~g~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~ 419 (525)
...| ++.+++|.+....+...+...+ +.+++.++.|++.||+|||+.+.++.++..++.++..+.. +. .
T Consensus 22 ~~~~~~~~~~~~~s~~~~~~~~~~~~~----~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~i~~~~~~~~~~~~-----~ 92 (366)
T TIGR00886 22 PLAVQMIKDDLGLSTAQLGNLVAVPVL----AGAVLRIILGFLVDKFGPRYTTTLSLLLLAIPCLWAGLAVQSY-----S 92 (366)
T ss_pred HhhhHHHHHHhCCCHHHhhHhhHHHHH----HHHHHHHHHHHHHHHhCchHHHHHHHHHHHHHHHHHHHHhhhH-----H
Confidence 3345 3567789999888888888777 8889999999999999999999999999999888877765 33 3
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhhccccCcchhhhhhHHHHHHHHHHHHHHHHHHh
Q 041759 420 MRIGLELASLFSAYIAYTVIFIYAIELFPTCVRNSATSIMRLAIIFAAIFSSVLVA 475 (525)
Q Consensus 420 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~r~~~~~~~~~~~~~g~~~~p~i~~ 475 (525)
..++..++.+++.+ .++....++.|.+|+++|+.+.++......+|..+++.+.+
T Consensus 93 ~~~~~~~~~g~~~~-~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~i~~ 147 (366)
T TIGR00886 93 VLLLLRLFIGIAGG-SFASCMPWISFFFPKKIQGTALGLAAGWGNMGGGVAQFVMP 147 (366)
T ss_pred HHHHHHHHHHHhch-hhHhHHHHHHHhcCHhhhhHHHHHHHHHhHHHHHHHHHHHH
Confidence 45555666666643 44566788999999999999999988777666666555543
No 193
>PF11700 ATG22: Vacuole effluxer Atg22 like; InterPro: IPR024671 Autophagy is a major survival mechanism in which eukaryotes recycle cellular nutrients during stress conditions. Atg22, Avt3 and Avt4 are partially redundant vacuolar effluxers, which mediate the efflux of leucine and other amino acids resulting from autophagy []. This family also includes other transporter proteins.
Probab=99.04 E-value=3.9e-09 Score=105.23 Aligned_cols=152 Identities=15% Similarity=0.168 Sum_probs=130.7
Q ss_pred cceeeccccccchhhhhhhHHHHHHHHHHHhHHhhHhcccccCCch--HHHHHHHHHHHHHHHHHHh--------hhhHH
Q 041759 101 LTIISEWGLECSSAFIKGLPAASHFTGCLLGIVFLATLADSSLGRK--NLLFLSCLTMSVATSLTIF--------SNNLW 170 (525)
Q Consensus 101 ~~i~~~~~~~~~s~~~~g~~~s~~~lg~~~~~~~~G~l~dr~~Grk--~~~~~~~~~~~i~~~~~~~--------~~~~~ 170 (525)
..-++++|+ +..+...+.-+..+...+|++++|++.|| +|.| ++++++++++.+..+...+ .++-+
T Consensus 306 i~a~~~lg~---s~~~l~~~~l~~~i~a~~Ga~~~g~l~~r-~g~k~~~~l~~~l~~~~~i~~~g~~G~~~~~~g~~~~~ 381 (477)
T PF11700_consen 306 IYATEVLGM---STTQLIVFGLVVQIVAIIGALLFGWLQDR-FGPKTKRTLLISLILWIIIPLYGLFGFWPSFFGLKSPW 381 (477)
T ss_pred HHHHHhcCc---CHHHHHHHHHHHHHHHHHHHHHHHHHHHH-hCCchhHHHHHHHHHHHHHHHHHHHHhhhcccCcccHH
Confidence 344568999 99999999999999999999999999999 9999 8999999888776666666 67888
Q ss_pred HHHHHHHHHhhcccchhhhhheeeEeeecCcchhhHHhHHHHHHHHHHHHHHHH-HHhccCC-chHHHHHHHHHHHHHHH
Q 041759 171 IYSLLRFFSGISRATIGTCTIVLLTEKVGTEWRGLVGILDSFFFTIGTLTLPAI-AYTNRSS-SWTIIYLWTSIPTLVYS 248 (525)
Q Consensus 171 ~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~l~~~l-~~~~~~~-~wr~~f~~~~~~~~~~~ 248 (525)
.+.+.-++.|+..|...+...++.+|+.|+++.+..+|++....-....+||++ +.+.+.. +-|+.+....++.++.+
T Consensus 382 ~f~~~a~~~G~~~G~~qs~sRs~~~~LiP~g~e~efFgly~i~gk~ss~lGPll~g~i~~~tg~~r~g~~~l~~lf~~gl 461 (477)
T PF11700_consen 382 EFWVLAVLIGLFMGGIQSASRSLFSRLIPPGREAEFFGLYAITGKASSWLGPLLFGLITDATGSQRYGFLFLLVLFLIGL 461 (477)
T ss_pred HHHHHHHHHHHHhhhHHHHHHHHHHHhCCCchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCchhHHHHHHHHHHHHH
Confidence 999999999999999999999999999999999999999999999999999998 5555433 58888888888887777
Q ss_pred hHhheeecC
Q 041759 249 GLLYIFVSE 257 (525)
Q Consensus 249 ~~~~~~lpe 257 (525)
++..+++.
T Consensus 462 -~ll~~v~~ 469 (477)
T PF11700_consen 462 -ILLFFVDV 469 (477)
T ss_pred -HHHhhccc
Confidence 44455554
No 194
>PF02487 CLN3: CLN3 protein; InterPro: IPR003492 Batten's disease, the juvenile variant of neuronal ceroid lipofuscionosis (NCL), is a recessively inherited disorder affecting children of 5-10 years of age. The disease is characterised by progressive loss of vision, seizures and psychomotor disturbances. Biochemically, the disease is characterised by lysosomal accumulation of hydrophobic material, mainly ATP synthase subunit C, largely in the brain but also in other tissues. The disease is fatal within a decade []. Mutations in the CLN3 gene are believed to cause Batten's disease []. The CLN3 gene, with a predicted 438-residue product, maps to chromosome p16p12.1. The gene contains at least 15 exons spanning 15kb and is highly conserved in mammals []. A 1.02kb deletion in the CLN3 gene, occurring in either one or both alleles, is found in 85% of Batten disease chromosomes causing a frameshift generating a predicted translated product of 181 amino acid residues [, ]. 22 other mutations, including deletions, insertions and point mutations, have been reported. It has been suggested that such mutations result in severely truncated CLN3 proteins, or affect its structure/conformation [, ]. CLN3 proteins, which are believed to associate in complexes, are heavily glycosylated lysosomal membrane proteins [], containing complex Asn-linked oligosaccharides []. Extensive glycosylation is important for the stability of these lysosomal proteins in the highly hydrolytic lysosomal lumen. Lysosomal sequestration of active lysosomal enzymes, transport of degraded molecules from the lysosomes, and fusion and fission between lysosomes and other organelles. The CLN3 protein is a 43kDa, highly hydrophobic, multi-transmembrane (TM), phosphorylated protein []. Hydrophobicity analysis predicts 6-9 TM segments, suggesting that CLN3 is a TM protein that may function as a chaperone or signal transducer. The majority of putative phosphorylation sites are found in the N-terminal domain, encompassing 150 residues []. Phosphorylation is believed to be important for membrane compartment interaction, in the formation of functional complexes, and in regulation and interactions with other proteins []. CLN3 contains several motifs that may undergo lipid post-translational modifications (PTMs). PTMs contribute to targeting and anchoring of modified proteins to distinct biological membranes []. There are three general classes of lipid modification: N-terminal myristoylation, C-terminal prenylation, and palmitoylation of cysteine residues. Such modifications are believed to be a common form of PTM occurring in 0.5% of all cellular proteins, including brain tissue []. The C terminus of the CLN3 contains various lipid modification sites: C435, target for prenylation; G419, target for myristoylation; and C414, target for palmitoylation []. Prenylation results in protein hydrophobicity, influences interaction with upstream regulatory proteins and downstream effectors, facilitates protein-protein interaction (multisubunit assembly) and promotes anchoring to membrane lipids. The prenylation motif, Cys-A-A-X, is highly conserved within CLN3 protein sequences of different species []. Species with known CLN3 protein homologues include: Homo sapiens, Canis familiaris, Mus musculus, Saccharomyces cerevisiae and Drosophila melanogaster.; GO: 0016020 membrane
Probab=99.03 E-value=7.6e-08 Score=91.94 Aligned_cols=324 Identities=14% Similarity=0.064 Sum_probs=174.1
Q ss_pred hhhHHHHHHHHHHHhHHhhHhcccccCCchHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHhhcccchhhhhheeeEe
Q 041759 117 KGLPAASHFTGCLLGIVFLATLADSSLGRKNLLFLSCLTMSVATSLTIFSNNLWIYSLLRFFSGISRATIGTCTIVLLTE 196 (525)
Q Consensus 117 ~g~~~s~~~lg~~~~~~~~G~l~dr~~Grk~~~~~~~~~~~i~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~ 196 (525)
.+.+.-+-.+...+.-+.+.++.+| +..+.=+.+..++..++.++.++++|.+.=+++-++.+++.|........+..
T Consensus 61 t~~Vlladi~P~l~~Kl~aP~fi~~-v~y~~Ri~~~~~l~~~g~l~va~~~~v~~~l~Gv~las~ssg~GE~tfL~lt~- 138 (402)
T PF02487_consen 61 TGAVLLADILPSLLVKLIAPFFIHR-VPYWIRILICVALSAAGMLLVAFSPSVWVRLLGVVLASLSSGLGEVTFLSLTH- 138 (402)
T ss_pred chHHHHHHHHHHHHHHHHhHhhhhh-ccchHHHHHHHHHHHHHHhheeeccchhHHHHHHHHHhhhhhhhHHHHHHHHH-
Confidence 4555555666677777778888898 87665566677788889999999999999999999999999998888888754
Q ss_pred eecCcchhhHHhHHHHHHHHHHHHHHHHHHhcc--CCchHHHHHHHHHHHHHHHhHhheeecCCchHhhhcCCHHHHHHH
Q 041759 197 KVGTEWRGLVGILDSFFFTIGTLTLPAIAYTNR--SSSWTIIYLWTSIPTLVYSGLLYIFVSESPRWLFMQGRQEEAVEV 274 (525)
Q Consensus 197 ~~~~~~r~~~~~~~~~~~~~G~~l~~~l~~~~~--~~~wr~~f~~~~~~~~~~~~~~~~~lpesp~~~~~~~~~~~~~~~ 274 (525)
.+++ ...+-+..+.+.+.++|+..-..+. ..+-|..+++..++.++..+..++.+|.++.. ...++.
T Consensus 139 ~y~~----~~l~~wssGTG~aGl~Ga~~y~~lT~~g~s~~~tll~~~~lp~~~~~~~f~~L~~~~~~----~~~~~~--- 207 (402)
T PF02487_consen 139 FYGK----SSLSAWSSGTGGAGLVGALYYLGLTTLGLSPRTTLLIMLVLPAIFLLSYFFLLPSPPTN----RPYQES--- 207 (402)
T ss_pred hcCc----cccccccCCcChhhHHHHHHHHHHHHhCcCHHHHHHHHHHHHHHHHHHHHHhhcccccc----CCCccc---
Confidence 4543 3578888899999999887744333 33457788888877766663444455543210 000000
Q ss_pred HHhhCCCcCCccchhhhhhhccCCCCcccccccccchhhhhhhhc-chhHHHHHHHHHHHHHHHHHHHhhh--hhccccc
Q 041759 275 IKSLSPIKDSNQLSLSLVSAVSFGHEPAASSKESSFLSSIRELFV-RRWALERTLALMVPGFGIGVVYYGM--TLGIENL 351 (525)
Q Consensus 275 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~-~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~ 351 (525)
+...+..++..+.+.+..+.+...+ ..+++-++ -+.+.+.++-.+..++.-.....++ ....+..
T Consensus 208 -------~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~k~~~~k~Ll~ymiPL~lVY~aEY~InqGv~~tl~fp~~ 275 (402)
T PF02487_consen 208 -------ESEDEAEDDLLESETSESKPDSSSK-----LSFKEKLKRLKPLLWYMIPLFLVYFAEYFINQGVAPTLLFPNS 275 (402)
T ss_pred -------CCCCcccccccccccccccccccch-----hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhchHHHhcCCcc
Confidence 0000000000000000000000000 12222111 1111122222222333322222222 1111221
Q ss_pred CChhH-HHHHHHHHhcccccccCchhHHHHHHHHHhhcChhHHHH--HHHHHHHHHHHHHHhccccccchhHHHHHHHHH
Q 041759 352 GFDIY-LGVVFNALLEIPNLASTIPSFFLTFFLIQKWNRKSSLLV--LFIISGICSIMAVVANDISNAGKRMRIGLELAS 428 (525)
Q Consensus 352 ~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~l~d~~g~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 428 (525)
..+.. .........++ |.+++.--...+.-|++.+. ...+..+.+++-.+.... .+.+..++.++..
T Consensus 276 ~~~~r~~Y~~Y~~~YQ~--------GVFISRSS~~~~rir~lwils~LQ~~nl~~~~l~s~~~fi--psi~ivf~lif~e 345 (402)
T PF02487_consen 276 FFSPRDQYRWYQLLYQL--------GVFISRSSLPFFRIRRLWILSLLQVINLVFLLLQSWYRFI--PSIWIVFVLIFYE 345 (402)
T ss_pred CCCHHHHHHHHHHHHHH--------HHhhhhcceeeeehhhHHHHHHHHHHHHHHHHHHHHHHHh--hHHHHHHHHHHHH
Confidence 22222 22222222232 22222211122222333222 222222222222222111 1234666778888
Q ss_pred HHHHHHHHHHHHhhhccccCcchhhhhhHHHHHHHHHHHHHHHHHHh
Q 041759 429 LFSAYIAYTVIFIYAIELFPTCVRNSATSIMRLAIIFAAIFSSVLVA 475 (525)
Q Consensus 429 ~~~~~~~~~~~~~~~~~~~p~~~r~~~~~~~~~~~~~g~~~~p~i~~ 475 (525)
|+..|..+...+..+.|..|+++|..++|.......+|..++.++.-
T Consensus 346 GLlGGa~YVNtF~~I~~~~~~~~REFslg~vsvsds~GI~lAgll~l 392 (402)
T PF02487_consen 346 GLLGGASYVNTFYRISEEVPPEDREFSLGAVSVSDSLGILLAGLLGL 392 (402)
T ss_pred HHhhhHHHHHHHHHHHhcCCHHHHHHHHHHHHHHhhHHHHHHHHHHH
Confidence 88888888888888888899999999999999888888887776653
No 195
>TIGR00880 2_A_01_02 Multidrug resistance protein.
Probab=99.01 E-value=1.1e-08 Score=84.71 Aligned_cols=125 Identities=16% Similarity=0.165 Sum_probs=98.1
Q ss_pred cCchhHHHHHHHHHhhcChhHHHHHHHHHHHHHHHHHHhccccccchhHHHHHHHHHHHHHHHHHHHHHhhhccccCcch
Q 041759 372 STIPSFFLTFFLIQKWNRKSSLLVLFIISGICSIMAVVANDISNAGKRMRIGLELASLFSAYIAYTVIFIYAIELFPTCV 451 (525)
Q Consensus 372 ~~~~~~~~~~~l~d~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~ 451 (525)
+.+++.++.+++.||+|||+.+..+.....++.+......+. ....+..++.+++.+...+....+..|.+|++.
T Consensus 10 ~~~~~~~~~g~~~d~~g~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~ 84 (141)
T TIGR00880 10 GQLIYSPLSGLLTDRFGRKPVLLVGLFIFVLSTAMFALSSNI-----TVLIIARFLQGFGAAFALVAGAALIADIYPPEE 84 (141)
T ss_pred HHHHHHhhHHHHHhhcchhHHHHHHHHHHHHHHHHHHHhccH-----HHHHHHHHHHHHHHHHHHHhHHHHHHHHCChhh
Confidence 566888999999999999999998888888777766554333 355666778888888888899999999999999
Q ss_pred hhhhhHHHHHHHHHHHHHHHHHHhhc--cCchhHHHHHHHHHHHHHHHHHHh
Q 041759 452 RNSATSIMRLAIIFAAIFSSVLVAAG--SNNEFVSYGVFGLVIICCGFFVIC 501 (525)
Q Consensus 452 r~~~~~~~~~~~~~g~~~~p~i~~~~--~~~~~~~~~~~~~~~~~~~~~~~~ 501 (525)
|+++.++.+....+|..++|.+.+.. ..++...+.+.+.+.++..+..++
T Consensus 85 ~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 136 (141)
T TIGR00880 85 RGVALGLMSAGIALGPLLGPPLGGVLAQFLGWRAPFLFLAILALAAFILLAF 136 (141)
T ss_pred hhHHHHHHHHhHHHHHHHhHHhHHHHhcccchHHHHHHHHHHHHHHHHHHhh
Confidence 99999999999999999999998853 234556666666666655554433
No 196
>TIGR00887 2A0109 phosphate:H+ symporter. This model represents the phosphate uptake symporter subfamily of the major facilitator superfamily (pfam00083).
Probab=99.00 E-value=8.6e-09 Score=105.27 Aligned_cols=149 Identities=14% Similarity=0.064 Sum_probs=110.4
Q ss_pred ChhHHHHHHHHHhcccccccCchhHHHHHHHHHhhcChhHHHHHHHHHHHHHHHHHHhccccc-cchhHHHHHHHHHHHH
Q 041759 353 FDIYLGVVFNALLEIPNLASTIPSFFLTFFLIQKWNRKSSLLVLFIISGICSIMAVVANDISN-AGKRMRIGLELASLFS 431 (525)
Q Consensus 353 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~d~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~ 431 (525)
.+....+.+.+...+ +.+++.++.+++.||+|||+.+.++.++..++.++......... .+....++.-++.+++
T Consensus 53 ~~~~~~~~~~~~~~i----g~~ig~~~~g~l~d~~Grr~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~r~l~G~~ 128 (502)
T TIGR00887 53 LPSSVSAAVNGSASI----GTLAGQLFFGWLADKLGRKRVYGMELIIMIIATVASGLSPGSSPKSVMATLCFWRFWLGVG 128 (502)
T ss_pred chHHHHHHHHHHHHH----HHHHHHHHHHHHHHhhccHHHHHHHHHHHHHHHHHHHHccCcccchHHHHHHHHHHHHHHH
Confidence 344445566666666 78899999999999999999999998888888777666543200 0134677788888999
Q ss_pred HHHHHHHHHhhhccccCcchhhhhhHHHHHHHHHHHHHHHHHHhh-----c--------------------cCchhHHHH
Q 041759 432 AYIAYTVIFIYAIELFPTCVRNSATSIMRLAIIFAAIFSSVLVAA-----G--------------------SNNEFVSYG 486 (525)
Q Consensus 432 ~~~~~~~~~~~~~~~~p~~~r~~~~~~~~~~~~~g~~~~p~i~~~-----~--------------------~~~~~~~~~ 486 (525)
.+..++....+..|.+|++.|+++.++.+....+|..+++.+... . ..++...+.
T Consensus 129 ~g~~~~~~~~~~~e~~p~~~Rg~~~~~~~~~~~~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~WR~~~~ 208 (502)
T TIGR00887 129 IGGDYPLSAIITSEFATKKWRGAMMAAVFAMQGFGILAGAIVALIVLAGFKHSLEAAADEASCTGSCVPAVDYMWRILIG 208 (502)
T ss_pred HhhhhHHHHHHHHHhcChhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccccccccccccccccchhcccHHHHHH
Confidence 999999999999999999999999999999998988888776542 1 113555555
Q ss_pred HHHHHHHHHHHHHHhccCC
Q 041759 487 VFGLVIICCGFFVICLPET 505 (525)
Q Consensus 487 ~~~~~~~~~~~~~~~~~~~ 505 (525)
+.++..++..+..+++||+
T Consensus 209 ~~~ip~~i~~~~~~~lpES 227 (502)
T TIGR00887 209 FGAVPALLALYFRLTIPET 227 (502)
T ss_pred HHHHHHHHHHHHHHhCCCC
Confidence 5554555555555677876
No 197
>PRK11010 ampG muropeptide transporter; Validated
Probab=99.00 E-value=3.3e-09 Score=107.50 Aligned_cols=152 Identities=16% Similarity=0.219 Sum_probs=114.8
Q ss_pred cceeeccccccchhhhhhhHHH-HHHHHHHHhHHhhHhcccccCCchHHHHHHHHHHHHHHHHH---Hhh-hhHHHHHHH
Q 041759 101 LTIISEWGLECSSAFIKGLPAA-SHFTGCLLGIVFLATLADSSLGRKNLLFLSCLTMSVATSLT---IFS-NNLWIYSLL 175 (525)
Q Consensus 101 ~~i~~~~~~~~~s~~~~g~~~s-~~~lg~~~~~~~~G~l~dr~~Grk~~~~~~~~~~~i~~~~~---~~~-~~~~~l~~~ 175 (525)
|.+.+++|. +..+.+++.. ...++..++.++.|+++|| +|||+.+.++.++.+++.+.. +.. ++.+.+.+.
T Consensus 247 ~~l~~~~G~---s~~~~g~~~~~~g~i~~iiG~ll~G~L~dr-~g~~~~l~i~~~l~~l~~l~~~~l~~~~~~~~~l~~~ 322 (491)
T PRK11010 247 TFLIRGVGF---DAGEVGLVNKTLGLLATIVGALYGGILMQR-LSLFRALMIFGILQGVSNAGYWLLSITDKNLYSMGAA 322 (491)
T ss_pred HHHHHhcCC---CHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HhHHHHHHHHHHHHHHHHHHHHHHHhccccHHHHHHH
Confidence 344567899 9999999874 6678999999999999999 999998877666555544332 232 455555556
Q ss_pred HHHHhhcccchhhhhheeeEeeecCcchhhHHhHHHHHHHHHHHHHHHH-HHhccCCchHHHHHHHHHHHHHHHhHhhee
Q 041759 176 RFFSGISRATIGTCTIVLLTEKVGTEWRGLVGILDSFFFTIGTLTLPAI-AYTNRSSSWTIIYLWTSIPTLVYSGLLYIF 254 (525)
Q Consensus 176 r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~l~~~l-~~~~~~~~wr~~f~~~~~~~~~~~~~~~~~ 254 (525)
-++..+..|...+...++..+..+++.+++..++.+....+|..+++.+ |.+.+..||+..|.+.++.+++.. +....
T Consensus 323 ~~l~~~~~g~~~~~~~a~~~~l~~~~~~~t~~gl~~s~~~lg~~~~~~~~G~l~~~~G~~~~f~~~~~~~l~~l-~~~~~ 401 (491)
T PRK11010 323 VFFENLCGGMGTAAFVALLMTLCNKSFSATQFALLSALSAVGRVYVGPVAGWFVEAHGWPTFYLFSVAAAVPGL-LLLLV 401 (491)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHcCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHhChHHHHHHHHHHHHHHH-HHHHH
Confidence 6666655565566667778888899999999999999999998865555 777777899999999888888876 44444
Q ss_pred ecC
Q 041759 255 VSE 257 (525)
Q Consensus 255 lpe 257 (525)
+++
T Consensus 402 ~~~ 404 (491)
T PRK11010 402 CRQ 404 (491)
T ss_pred HHh
Confidence 444
No 198
>TIGR00903 2A0129 major facilitator 4 family protein. This family of proteins are uncharacterized proteins from archaea. This family includes proteins from Archaeoglobus fulgidus and Aeropyrum pernix.
Probab=98.98 E-value=1.9e-08 Score=97.95 Aligned_cols=155 Identities=10% Similarity=-0.009 Sum_probs=112.0
Q ss_pred hhhhhcccccCChhHHHHHHHHHhcccccccCchhHHHHHHHHHhhcChhHHHHHHHHHHHHHHHHHHhccccccchhHH
Q 041759 342 YGMTLGIENLGFDIYLGVVFNALLEIPNLASTIPSFFLTFFLIQKWNRKSSLLVLFIISGICSIMAVVANDISNAGKRMR 421 (525)
Q Consensus 342 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~d~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 421 (525)
..+|.+.++++.+..+.+.+.+...+ +..++.+..|++.||+|||+++.........+.. ....... +...
T Consensus 12 ~~lp~i~~~~~~s~~~~g~~~s~~~~----g~~i~~~~~G~l~Dr~grr~~~~~~~~~~~~~~~-~~~~~~~----~~~l 82 (368)
T TIGR00903 12 PVLSLVAEDIDVSKEELGLLAITYPA----AFLALTIPSGLLLDRAFKRWFLFGSLATFAAAAG-RLLDPFN----YEWL 82 (368)
T ss_pred hhHHHHHHHhCcCHHHHHHHHHHHHH----HHHHHHHHHHHHHHHccchHHHHHHHHHHHHHHH-HHHHhcc----HHHH
Confidence 44577778889998888888887777 7779999999999999999876655444433322 2222122 4567
Q ss_pred HHHHHHHHHHHHHHHHHHHhhhccccCcchhhhhhHHHHHHHHHHHHHHHHHHhh--ccCchhHHHHHHHHHHHHHHH-H
Q 041759 422 IGLELASLFSAYIAYTVIFIYAIELFPTCVRNSATSIMRLAIIFAAIFSSVLVAA--GSNNEFVSYGVFGLVIICCGF-F 498 (525)
Q Consensus 422 ~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~r~~~~~~~~~~~~~g~~~~p~i~~~--~~~~~~~~~~~~~~~~~~~~~-~ 498 (525)
++.-++.+++.+. .........|.+|+++|++++++.+....+|..++|.+.+. ...++...|.+.+++.++..+ .
T Consensus 83 ~~~R~l~G~g~~~-~~~~~~~~~~~~~~~~r~~a~~~~~~~~~lG~~l~~~~~~~l~~~~gWr~~f~~~~~l~~~~~~~~ 161 (368)
T TIGR00903 83 LACQLLAALGQPF-LLNAFAPAASQIREERRDLVISLLSFAMYLGIIFALAAGLKIYTAGGLQLLIIPIAAVAAAGIILV 161 (368)
T ss_pred HHHHHHHHhHhHH-HHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccchHHHHHHHHHHHHHHHHHH
Confidence 7777778888775 44555566899999999999999999999999999888774 344677777776776655544 4
Q ss_pred HHhccCCC
Q 041759 499 VICLPETR 506 (525)
Q Consensus 499 ~~~~~~~~ 506 (525)
.+++||..
T Consensus 162 ~~~lp~~p 169 (368)
T TIGR00903 162 LAALPALP 169 (368)
T ss_pred HHHcCCCC
Confidence 45567643
No 199
>PRK10207 dipeptide/tripeptide permease B; Provisional
Probab=98.97 E-value=1.2e-08 Score=102.94 Aligned_cols=150 Identities=11% Similarity=0.041 Sum_probs=107.3
Q ss_pred hhcccccCChhHHHHHHHHHhcccccccCchhHHHHHHHHHh-hcChhHHHHHHHHHHHHHHHHHHhccccccchhHHHH
Q 041759 345 TLGIENLGFDIYLGVVFNALLEIPNLASTIPSFFLTFFLIQK-WNRKSSLLVLFIISGICSIMAVVANDISNAGKRMRIG 423 (525)
Q Consensus 345 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~d~-~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 423 (525)
.+..+++|.+......+.+.... ......+++|+++|| +|||+++.++.++..++.+.+.+.... ....++
T Consensus 39 ~yl~~~lg~~~~~a~~i~~~~~~----~~~~~~~~~G~laDr~~G~r~~~~~g~~~~~~g~~~~~~~~~~----~~ll~~ 110 (489)
T PRK10207 39 VFFVKQLGFSQEQAFITFGAFAA----LVYGLISIGGYVGDHLLGTKRTIVLGAIVLAIGYFMTGMSLLK----PDLIFI 110 (489)
T ss_pred HHHHHHcCCCHHHHHHHHHHHHH----HHHHHHhhHHHhhhhccchHHHHHHHHHHHHHHHHHHHHhccc----hhHHHH
Confidence 33445688887777666655544 333566789999999 999999999999999998888775443 223445
Q ss_pred HHHHHHHHHHHHHHHHHhhhccccCcc--hhhhhhHHHHHHHHHHHHHHHHHHhh--ccCchhHHHHHHHHHHHHHHHHH
Q 041759 424 LELASLFSAYIAYTVIFIYAIELFPTC--VRNSATSIMRLAIIFAAIFSSVLVAA--GSNNEFVSYGVFGLVIICCGFFV 499 (525)
Q Consensus 424 ~~~~~~~~~~~~~~~~~~~~~~~~p~~--~r~~~~~~~~~~~~~g~~~~p~i~~~--~~~~~~~~~~~~~~~~~~~~~~~ 499 (525)
...+.+.+.+...+...+++.|.+|++ .|+.++++.+...++|..++|.+.++ ...++.+.|.+.++..+++.+.+
T Consensus 111 ~~~l~~ig~g~~~~~~~~li~~~~p~~~~~~~~~~~~~~~~~nig~~~g~~l~g~l~~~~gw~~~F~i~~i~~~~~~~~~ 190 (489)
T PRK10207 111 ALGTIAVGNGLFKANPASLLSKCYPPKDPRLDGAFTLFYMSINIGSLISLSLAPVIADKFGYSVTYNLCGAGLIIALLVY 190 (489)
T ss_pred HHHHHHhccccccCCHHHHHHHhcCCCchhhhcchhHHHHHHHHHHHHHHHHHHHHHHhhChHHHHHHHHHHHHHHHHHH
Confidence 566667777778888889999999877 45778899999999999999988885 23356666766554444444333
Q ss_pred Hhc
Q 041759 500 ICL 502 (525)
Q Consensus 500 ~~~ 502 (525)
...
T Consensus 191 ~~~ 193 (489)
T PRK10207 191 FAC 193 (489)
T ss_pred HHc
Confidence 333
No 200
>PRK10406 alpha-ketoglutarate transporter; Provisional
Probab=98.96 E-value=2.8e-08 Score=99.46 Aligned_cols=134 Identities=13% Similarity=0.055 Sum_probs=98.4
Q ss_pred cCchhHHHHHHHHHhhcChhHHHHHHHHHHHHHHHHHHhccccc---cchhHHHHHHHHHHHHHHHHHHHHHhhhccccC
Q 041759 372 STIPSFFLTFFLIQKWNRKSSLLVLFIISGICSIMAVVANDISN---AGKRMRIGLELASLFSAYIAYTVIFIYAIELFP 448 (525)
Q Consensus 372 ~~~~~~~~~~~l~d~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p 448 (525)
+..+|.++.|++.||+|||+.+..+..+.+++.++..+.++... ......+++-++.|++.+..++...+++.|.+|
T Consensus 75 ~~~ig~~~~G~l~Dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~R~l~G~g~g~~~~~~~~~i~e~~p 154 (432)
T PRK10406 75 MRPIGGWLFGRIADKHGRKKSMLISVCMMCFGSLVIACLPGYETIGTWAPALLLLARLFQGLSVGGEYGTSATYMSEVAV 154 (432)
T ss_pred HHHHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHHHHhhcCCchhHHHHHHHHHHHHHHHHHhhhhhhHhhHHHHHHHhCC
Confidence 66689999999999999999999999999999888877654300 011245667778888888899999999999999
Q ss_pred cchhhhhhHHHHHHHHHHHHHHHHHHhh----------ccCchhHHHHHHHHHHHHHHHHHHhccCC
Q 041759 449 TCVRNSATSIMRLAIIFAAIFSSVLVAA----------GSNNEFVSYGVFGLVIICCGFFVICLPET 505 (525)
Q Consensus 449 ~~~r~~~~~~~~~~~~~g~~~~p~i~~~----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 505 (525)
+++|+...++.......|.++++.+... ...++...|.+.++..++..++...++|.
T Consensus 155 ~~~rg~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~~gWr~~F~i~~~~~ll~~~~~~~~~e~ 221 (432)
T PRK10406 155 EGRKGFYASFQYVTLIGGQLLALLVVVVLQQTLEDAELREWGWRIPFALGAVLAVVALWLRRQLDET 221 (432)
T ss_pred CCcccHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHHHHhccchHHHHHHHHHHHHHHHHHHhcCCCC
Confidence 9999999888877767776666654331 13466777776665555443333334443
No 201
>TIGR02718 sider_RhtX_FptX siderophore transporter, RhtX/FptX family. RhtX from Sinorhizobium meliloti 2011 and FptX from Pseudomonas aeruginosa appear to be single polypeptide transporters, from the major facilitator family (see pfam07690) for import of siderophores as a means to import iron. This function was suggested by proximity to siderophore biosynthesis genes and then confirmed by study of knockout and heterologous expression phenotypes.
Probab=98.95 E-value=9.4e-09 Score=101.53 Aligned_cols=144 Identities=13% Similarity=0.005 Sum_probs=109.0
Q ss_pred cceeeccccccchhhhhhhHHHHHH-HHHHHhHHhhHhcccccCCchHHHHHHHHHHHHHHHHHHh------hhhHHHHH
Q 041759 101 LTIISEWGLECSSAFIKGLPAASHF-TGCLLGIVFLATLADSSLGRKNLLFLSCLTMSVATSLTIF------SNNLWIYS 173 (525)
Q Consensus 101 ~~i~~~~~~~~~s~~~~g~~~s~~~-lg~~~~~~~~G~l~dr~~Grk~~~~~~~~~~~i~~~~~~~------~~~~~~l~ 173 (525)
+.+.+|.|+ +..++|++..... .+..++.++.|++.|| +|+|+.+..+..+.++..+.... .++.+.+.
T Consensus 232 ~~~l~~~G~---s~~~ig~~~~~~~~~~~~~g~~~~g~l~~r-~g~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 307 (390)
T TIGR02718 232 KLYLVDAGW---PLEWIGRLGMAGGAVTVLLGCGGGAWLVRR-AGLWRTFILGVGLAGSLALLWFAQAAFWLAPGIAVAW 307 (390)
T ss_pred hHHHHhcCC---CHHHHHHHHhHHHHHHHHHHHHHHHHHHHH-hhHHHHHHHHHHHHHHHHHHHHHHHHcccCCcHHHHH
Confidence 344456799 9999999988876 4667788999999999 99999998877766443333221 12334445
Q ss_pred HHHHHHhhcccchhhhhheeeEeeecC-cchhhHHhHHHHHHHHHHHHHHHH-HHhccCCchHHHHHHHHHHHHHHH
Q 041759 174 LLRFFSGISRATIGTCTIVLLTEKVGT-EWRGLVGILDSFFFTIGTLTLPAI-AYTNRSSSWTIIYLWTSIPTLVYS 248 (525)
Q Consensus 174 ~~r~l~G~~~~~~~~~~~~~i~~~~~~-~~r~~~~~~~~~~~~~G~~l~~~l-~~~~~~~~wr~~f~~~~~~~~~~~ 248 (525)
...++.+++.+...+...+.+.+..++ +++++.+++.+...++|..++|.+ +.+.+..||+..|++.+++.++..
T Consensus 308 ~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~lg~~~g~~~~G~l~~~~G~~~~f~~~~~~~l~a~ 384 (390)
T TIGR02718 308 SCSAFGSLITGITSVAIYTAFMRFAGDGDQAGTDVTAVQSTRDLGELIASSIAGYLTDRFGYAGGFLSGTVLAVLAI 384 (390)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhCcccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHH
Confidence 555666777777777777776676765 889999999999999999999998 566666799999998887777655
No 202
>TIGR00894 2A0114euk Na(+)-dependent inorganic phosphate cotransporter.
Probab=98.94 E-value=7e-09 Score=105.02 Aligned_cols=145 Identities=13% Similarity=0.028 Sum_probs=115.3
Q ss_pred ccCChhHHHHHHHHHhcccccccCchhHHHHHHHHHhhcChhHHHHHHHHHHHHHHHHHHhccccccchhHHHHHHHHHH
Q 041759 350 NLGFDIYLGVVFNALLEIPNLASTIPSFFLTFFLIQKWNRKSSLLVLFIISGICSIMAVVANDISNAGKRMRIGLELASL 429 (525)
Q Consensus 350 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~d~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 429 (525)
+++.+....+.+.+...+ +.+++.++.|++.||+|+|+.+..+.++..++.++..+.... +....++.-++.|
T Consensus 70 ~~~~s~~~~g~~~s~~~~----~~~~~~~~~g~l~dr~g~r~~l~~~~~~~~~~~~~~~~~~~~---~~~~l~~~r~~~G 142 (465)
T TIGR00894 70 NFKWSGALQGLILSSHFY----GQIIIQIPVGYLAGKYVFKWSIGIGMFLSSVISIVIPWAAGG---GIALVVFCRVIQG 142 (465)
T ss_pred CCCCCHHHhhHHHHHHHH----HHHHHHcchHHHHHHhCcchhhHHHHHHHHHHHHHHHHHHHc---CchHHHHHHHHHH
Confidence 567777787877777777 777999999999999999999999988888777766543222 1345677778888
Q ss_pred HHHHHHHHHHHhhhccccCcchhhhhhHHHHHHHHHHHHHHHHHHhh--cc-CchhHHHHHHHHHHHHHHHHHHh
Q 041759 430 FSAYIAYTVIFIYAIELFPTCVRNSATSIMRLAIIFAAIFSSVLVAA--GS-NNEFVSYGVFGLVIICCGFFVIC 501 (525)
Q Consensus 430 ~~~~~~~~~~~~~~~~~~p~~~r~~~~~~~~~~~~~g~~~~p~i~~~--~~-~~~~~~~~~~~~~~~~~~~~~~~ 501 (525)
++.+..++....++.|.+|++.|+++.++......+|..++|.+.+. .. .++...|.+.+++.++..++.+.
T Consensus 143 ~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~i~~~l~~~l~~~~~gw~~~f~i~~~~~~~~~~~~~~ 217 (465)
T TIGR00894 143 LAQGSVSPATHKIIVKWAPPKERSRLLGMSTSGFQLGTFIFLPISGWLCESWGGWPMIFYVFGIVGCAWSLLWFV 217 (465)
T ss_pred HhcccchhhHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCeehhhhhHHHHHHHHHHHH
Confidence 99899999999999999999999999999999999999999998874 23 25677777777766655554444
No 203
>TIGR00806 rfc RFC reduced folate carrier. Proteins of the RFC family are so-far restricted to animals. RFC proteins possess 12 putative transmembrane a-helical spanners (TMSs) and evidence for a 12 TMS topology has been published for the human RFC. The RFC transporters appear to transport reduced folate by an energy-dependent, pH-dependent, Na+-independent mechanism. Folate:H+ symport, folate:OH- antiport and folate:anion antiport mechanisms have been proposed, but the energetic mechanism is not well defined.
Probab=98.94 E-value=5.1e-08 Score=94.45 Aligned_cols=154 Identities=14% Similarity=0.081 Sum_probs=123.3
Q ss_pred HhhhhhcccccCChhHH-HHHHHHHhcccccccCchhHHHHHHHHHhhcChhHHHHHHHHHHHHHHHHHHhccccccchh
Q 041759 341 YYGMTLGIENLGFDIYL-GVVFNALLEIPNLASTIPSFFLTFFLIQKWNRKSSLLVLFIISGICSIMAVVANDISNAGKR 419 (525)
Q Consensus 341 ~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~l~d~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 419 (525)
.+..|++.+++|++..+ .+.+.+.... +..+..+.+|++.||+|.|+++.++.+...+..++.++.... .
T Consensus 46 s~a~p~L~~elglT~~qv~G~I~s~F~y----sYal~qIp~GlLaDrlG~K~vL~l~~l~Wsl~t~L~~fa~Sl-----~ 116 (511)
T TIGR00806 46 SFITPYLLTVLNFTEETVTNEIIPVLPY----SHLAVLVPVFLLTDYLRYKPVLVLQALSFVCVWLLLLLGTSV-----W 116 (511)
T ss_pred HHHHHHHHHHcCCCHHHhcchHHHHHHH----HHHHHHHHHHHHHHHhCchHHHHHHHHHHHHHHHHHHHHHHH-----H
Confidence 34557777789999888 8888888888 788999999999999999999999999999999988886544 5
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhhccccCcchhhhhhHHHHHHHHHHHHHHHHHHhhc-cCc---hhHHHHHHHHHHHHH
Q 041759 420 MRIGLELASLFSAYIAYTVIFIYAIELFPTCVRNSATSIMRLAIIFAAIFSSVLVAAG-SNN---EFVSYGVFGLVIICC 495 (525)
Q Consensus 420 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~r~~~~~~~~~~~~~g~~~~p~i~~~~-~~~---~~~~~~~~~~~~~~~ 495 (525)
.+.+.-++.|++.+..+ ....++...+|++.|+++.|+.+....+|.++++.+.++. ..+ +.....+-.....++
T Consensus 117 ~L~i~R~llGvaEA~~~-A~~syI~~WfP~kER~ratsi~~sg~~vG~~Ia~~L~qll~s~gWr~y~~Ln~Isl~s~~~a 195 (511)
T TIGR00806 117 HMQLMEVFYSVTMAARI-AYSSYIFSLVPPSRYQRAAAYSRAAVLLGVFLSSVLGQLLVTLGWISYSTLNIISLVFMTFS 195 (511)
T ss_pred HHHHHHHHHHHHHHHHH-HHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCchhHHHHHHHHHHHHHHH
Confidence 77888899999999998 9999999999999999999999999999999988887741 112 222223333344455
Q ss_pred HHHHHhccC
Q 041759 496 GFFVICLPE 504 (525)
Q Consensus 496 ~~~~~~~~~ 504 (525)
.++.+++|.
T Consensus 196 ~~~a~~LP~ 204 (511)
T TIGR00806 196 VFLALFLKR 204 (511)
T ss_pred HHHHHhCCC
Confidence 566677764
No 204
>PRK08633 2-acyl-glycerophospho-ethanolamine acyltransferase; Validated
Probab=98.93 E-value=5.2e-09 Score=118.32 Aligned_cols=142 Identities=18% Similarity=0.103 Sum_probs=121.2
Q ss_pred ceeeccccccchhh-hhhhHHHHHHHHHHHhHHhhHhcccccCCchHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHh
Q 041759 102 TIISEWGLECSSAF-IKGLPAASHFTGCLLGIVFLATLADSSLGRKNLLFLSCLTMSVATSLTIFSNNLWIYSLLRFFSG 180 (525)
Q Consensus 102 ~i~~~~~~~~~s~~-~~g~~~s~~~lg~~~~~~~~G~l~dr~~Grk~~~~~~~~~~~i~~~~~~~~~~~~~l~~~r~l~G 180 (525)
.+.+++|+ +.. +.|++.+...++.++++++.|+++|| +++|+++.++.++.+++.++..+..+.+.++++.++.|
T Consensus 258 ~~~~~~g~---s~~~~~g~~~~~~~ig~~~g~~~~g~l~~r-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g 333 (1146)
T PRK08633 258 YAKEVLGL---DNTFQVQYLLAASAIGIGIGSLLAGRLSGR-HIELGLVPLGALGLALSLFLLPTAPSLASVLVLFFLFG 333 (1146)
T ss_pred HHHHHhCC---CcHHHHHHHHHHHHHHHHHHHHHHHHHhCC-ceEccchhHHHHHHHHHHHHHHHhhhHHHHHHHHHHHH
Confidence 44566888 888 99999999999999999999999999 99999999999989888888888889999999999999
Q ss_pred hcccchhhhhheeeEeeecCcchhhHHhHHHHHHHHHHHHHHHHHHhcc--CCchHHHHHHHHHHHHHH
Q 041759 181 ISRATIGTCTIVLLTEKVGTEWRGLVGILDSFFFTIGTLTLPAIAYTNR--SSSWTIIYLWTSIPTLVY 247 (525)
Q Consensus 181 ~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~l~~~l~~~~~--~~~wr~~f~~~~~~~~~~ 247 (525)
++.+...+...+++.+..|+++||+++++.+....+|.++++.++.++. ..++...|++.+.+.++.
T Consensus 334 ~~~~~~~~~~~~~~~~~~p~~~rg~~~~~~~~~~~lg~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~ 402 (1146)
T PRK08633 334 FSAGLFIVPLNALIQFRAPEKELGKVLAANNFLQNVGMLLFLALTTLFSGLGLSPAGLFYLIALVTLIG 402 (1146)
T ss_pred HHHHHhhHHHHHHHhhcCCccchhhhhHHHHHHHHHHHHHHHHHHHHHHHhccCHHHHHHHHHHHHHHH
Confidence 9999998999999999999999999999999999999988887765543 245666666655554443
No 205
>PF01306 LacY_symp: LacY proton/sugar symporter; InterPro: IPR022814 In bacteria there are a number of families of transport proteins, including symporters and antiporters, that mediate the intake of a variety of sugars with the concomitant uptake of hydrogen ions (proton symporters) []. The lacY family of Escherichia coli and Klebsiella pneumoniae are proton/beta-galactoside symporters, which, like most sugar transporters, are integral membrane proteins with 12 predicted transmembrane (TM) regions. Also similar to the lacY family are the rafinose (rafB) and sucrose (cscB) permeases from E. coli []. This entry also includes bacterial phenylproprionate permease.; PDB: 1PV7_B 1PV6_A 2Y5Y_B 2CFQ_A 2V8N_B 2CFP_A.
Probab=98.92 E-value=1e-08 Score=98.54 Aligned_cols=145 Identities=17% Similarity=0.258 Sum_probs=124.4
Q ss_pred hhhhhhhHHHHHHHHHHHhHHhhHhcccccCCchHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHhhcccchhhhhhe
Q 041759 113 SAFIKGLPAASHFTGCLLGIVFLATLADSSLGRKNLLFLSCLTMSVATSLTIFSNNLWIYSLLRFFSGISRATIGTCTIV 192 (525)
Q Consensus 113 s~~~~g~~~s~~~lg~~~~~~~~G~l~dr~~Grk~~~~~~~~~~~i~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~ 192 (525)
++...|.+.+...+.-++...+..++.+| +|.|+.++++.++..+=.++++++++.+.+.+.+.+.|+-.+........
T Consensus 257 g~~~~G~l~s~~v~~E~~~m~~~p~li~r-ig~k~~Lllag~i~~iRi~~~~~~~~~~~i~~~klLH~~e~~l~lva~fk 335 (412)
T PF01306_consen 257 GNQMYGYLWSVQVFLEALMMFFSPWLINR-IGAKNLLLLAGVIMAIRIIGSGFATNPWVISLIKLLHALEFPLLLVAAFK 335 (412)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHH-H-HHHHHHHHHHHHHHHHHHHHT--SHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred ChhHHhHHHHHHHHHHHHHHHHHHHHHHh-cChHhHHHHHHHHHHHHHHHHhhhcchHHHHHHHHHHHHHHHHHHHHHHH
Confidence 67789999999999999999999999999 99999999999999999999999999999999999999999999999999
Q ss_pred eeEeeecCcchhhHHhH-HHHHHHHHHHHHHHH-HHhccCCchHHHHHHHHHHHHHHHhHhheeecCC
Q 041759 193 LLTEKVGTEWRGLVGIL-DSFFFTIGTLTLPAI-AYTNRSSSWTIIYLWTSIPTLVYSGLLYIFVSES 258 (525)
Q Consensus 193 ~i~~~~~~~~r~~~~~~-~~~~~~~G~~l~~~l-~~~~~~~~wr~~f~~~~~~~~~~~~~~~~~lpes 258 (525)
|+++.+|+|..++...+ .+.+.++|.++.+.+ |.+-+..|.+..|++.+.+.+...++..+.+++.
T Consensus 336 YI~~~fd~rlsAt~y~v~~~~~~~~~~~i~s~~~G~lyd~~G~~~tylimg~iv~~~~li~~f~l~~~ 403 (412)
T PF01306_consen 336 YITAHFDKRLSATLYLVGFQFAKQIGIIILSPLAGYLYDRIGFQHTYLIMGLIVLPFTLISAFTLKKD 403 (412)
T ss_dssp HHHHHS-GGGHHHHHHHHHTTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHS--S
T ss_pred HHHHhCCHhHHHHHHHHHHHHHHHHHHHHHhhhHHhhHhhcCcHHHHHHHHHHHHHHHHHheeeecCC
Confidence 99999998887777766 467888888886666 7777888999999999998888776767666653
No 206
>PRK15075 citrate-proton symporter; Provisional
Probab=98.92 E-value=1e-08 Score=102.78 Aligned_cols=131 Identities=16% Similarity=0.047 Sum_probs=92.2
Q ss_pred ccce-eeccccccchhhhhhhHHHHHHHHHHHhHHhhHhcccccCCchHHHHHHHHHHHHHHHH-H---HhhhhHHHHHH
Q 041759 100 ALTI-ISEWGLECSSAFIKGLPAASHFTGCLLGIVFLATLADSSLGRKNLLFLSCLTMSVATSL-T---IFSNNLWIYSL 174 (525)
Q Consensus 100 ~~~i-~~~~~~~~~s~~~~g~~~s~~~lg~~~~~~~~G~l~dr~~Grk~~~~~~~~~~~i~~~~-~---~~~~~~~~l~~ 174 (525)
.|.+ ++.+|+ +..+.++....+.++..++.++.|+++|| +|||++++.+.++..+..+. . ...+++..+.+
T Consensus 261 ~p~~l~~~~g~---~~~~~~~~~~~~~~~~~~~~~~~g~l~Dr-~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 336 (434)
T PRK15075 261 TPTFGKTVLHL---SAADSLLVTLCVGVSNFIWLPIGGALSDR-IGRRPVLIAFTVLAILTAYPALSWLVAAPSFARMLA 336 (434)
T ss_pred HHHHHHHhcCC---CHHHHHHHHHHHHHHHHHHHHHHHHHHHH-hcchHHHHHHHHHHHHHHHHHHHHHHcCCchHHHHH
Confidence 3444 344788 88888999899999999999999999999 99999888765544332211 1 11234444555
Q ss_pred HHHHHhhcccchhhhhheeeEeeecCcchhhHHhHHH-HHHHHHHHHHHHH-HHhccCCchH
Q 041759 175 LRFFSGISRATIGTCTIVLLTEKVGTEWRGLVGILDS-FFFTIGTLTLPAI-AYTNRSSSWT 234 (525)
Q Consensus 175 ~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~-~~~~~G~~l~~~l-~~~~~~~~wr 234 (525)
..++.|++.+...+....++.|.+|++.|+...++.. .+..++..++|.+ +.+.+..|++
T Consensus 337 ~~~~~~~~~g~~~~~~~~~~~e~~p~~~rg~~~g~~~~~~~~~~g~~~p~~~g~i~~~~g~~ 398 (434)
T PRK15075 337 VELWLSFLYGSYNGAMVVALTEVMPAEVRTAGFSLAYSLATAIFGGFTPAISTWLIHVTGDK 398 (434)
T ss_pred HHHHHHHHHHHHHhhHHHHHHHHCCCCccchheeHHHHHHHHHHhhhHHHHHHHHHHhcCCc
Confidence 5566667776666666778899999999999999854 4444556667776 6666656653
No 207
>KOG2615 consensus Permease of the major facilitator superfamily [General function prediction only]
Probab=98.91 E-value=5.8e-09 Score=96.15 Aligned_cols=115 Identities=14% Similarity=0.108 Sum_probs=90.6
Q ss_pred CChhHHHHHHHHHhcccccccCchhHHHHHHHHHhhcChhHHHHHHHHHHHHHHHHHHhccccccchhHHHHHHHHHHHH
Q 041759 352 GFDIYLGVVFNALLEIPNLASTIPSFFLTFFLIQKWNRKSSLLVLFIISGICSIMAVVANDISNAGKRMRIGLELASLFS 431 (525)
Q Consensus 352 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~d~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 431 (525)
+.+....+++.+.+.+ .+.+.+...|.++||+|||.++..|.+..+++.++.+...+. ...+..-++.|..
T Consensus 64 ~~~~~yaGflGSsF~i----lQ~~sS~~~G~~SD~yGRkpvll~c~~~va~s~ll~~~S~~F-----~afv~aR~l~Gi~ 134 (451)
T KOG2615|consen 64 GASVFYAGFLGSSFSI----LQFISSPLWGCLSDRYGRKPVLLACLIGVALSYLLWALSRNF-----AAFVLARFLGGIF 134 (451)
T ss_pred cccchhhhhHhhHHHH----HHHHhhhhhhhhhhhhCchHHHHHHHHHHHHHHHHHHHHHHH-----HHHHHHHHhhhhc
Confidence 3345556666666666 777999999999999999999999999999977776665433 2233334555554
Q ss_pred HHHHHHHHHhhhccccCcchhhhhhHHHHHHHHHHHHHHHHHHhh
Q 041759 432 AYIAYTVIFIYAIELFPTCVRNSATSIMRLAIIFAAIFSSVLVAA 476 (525)
Q Consensus 432 ~~~~~~~~~~~~~~~~p~~~r~~~~~~~~~~~~~g~~~~p~i~~~ 476 (525)
.+ ..++..++++|++++++|+.+++...+...+|.++||.+.|+
T Consensus 135 kg-nl~v~rAiisdV~sek~r~l~ms~v~~a~~lGfilGPmIGgy 178 (451)
T KOG2615|consen 135 KG-NLSVIRAIISDVVSEKYRPLGMSLVGTAFGLGFILGPMIGGY 178 (451)
T ss_pred cC-chHHHHHHHHhhcChhhccceeeeeehhhhcchhhcchhhhH
Confidence 43 347888999999999999999999999999999999999995
No 208
>PRK10133 L-fucose transporter; Provisional
Probab=98.91 E-value=7.9e-08 Score=96.09 Aligned_cols=132 Identities=9% Similarity=-0.016 Sum_probs=106.5
Q ss_pred HHHHhhhhhcccccCChhHHHHHHHHHhcccccccCchhHHHHHHHHHhhcChhHHHHHHHHHHHHHHHHHHhccccccc
Q 041759 338 GVVYYGMTLGIENLGFDIYLGVVFNALLEIPNLASTIPSFFLTFFLIQKWNRKSSLLVLFIISGICSIMAVVANDISNAG 417 (525)
Q Consensus 338 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~d~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 417 (525)
.......|.+.++++.+..+.+...+...+ +..++.++.|++.||+|||+++..+..+..++.++....... .+
T Consensus 43 ~~~~~~~p~i~~~~~~s~~~~gl~~~~~~~----g~~i~~~~~g~l~dr~G~r~~l~~g~~~~~~~~~l~~~~~~a--~~ 116 (438)
T PRK10133 43 NLNDILLPQFQQAFTLTNFQAGLIQSAFYF----GYFIIPIPAGILMKKLSYKAGIITGLFLYALGAALFWPAAEI--MN 116 (438)
T ss_pred HHHHHHHHHHHHHhCCCHHHHHHHHHHHHH----HHHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHHHhc--CC
Confidence 445556677777899999999888888777 888999999999999999999999999999988775322111 12
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHhhhccccCcchhhhhhHHHHHHHHHHHHHHHHHHh
Q 041759 418 KRMRIGLELASLFSAYIAYTVIFIYAIELFPTCVRNSATSIMRLAIIFAAIFSSVLVA 475 (525)
Q Consensus 418 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~r~~~~~~~~~~~~~g~~~~p~i~~ 475 (525)
+...++..++.+++.+...+....++.+..|++.|+..+++.+....+|..++|.+.+
T Consensus 117 ~~~ll~~r~l~G~g~g~~~~~~~~~v~~~~~~~~~~~~~s~~~~~~~~G~~~g~~~g~ 174 (438)
T PRK10133 117 YTLFLVGLFIIAAGLGCLETAANPFVTVLGPESSGHFRLNLAQTFNSFGAIIAVVFGQ 174 (438)
T ss_pred HHHHHHHHHHHHHHHHHHHhhHHHHHHHhCChhhHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 4567778888889999998888888888877776666788999998999999888765
No 209
>PF06813 Nodulin-like: Nodulin-like; InterPro: IPR010658 This entry represents a conserved region within plant nodulin-like proteins and a number of uncharacterised proteins.
Probab=98.90 E-value=9.4e-09 Score=92.26 Aligned_cols=154 Identities=19% Similarity=0.258 Sum_probs=119.6
Q ss_pred cccceeeccccccchhhhhhhHHHHHHHHHHHhHHhhHhcccccCCchHHHHHHHHHHHHHHHHHHhh-------hhHHH
Q 041759 99 TALTIISEWGLECSSAFIKGLPAASHFTGCLLGIVFLATLADSSLGRKNLLFLSCLTMSVATSLTIFS-------NNLWI 171 (525)
Q Consensus 99 ~~~~i~~~~~~~~~s~~~~g~~~s~~~lg~~~~~~~~G~l~dr~~Grk~~~~~~~~~~~i~~~~~~~~-------~~~~~ 171 (525)
|-|++++.+|+ ++.|...+.+.-.+|..+| ++.|.+.|+ +|+|.++.+|.+...+|..+...+ .++|.
T Consensus 24 yS~~Lk~~l~~---sq~~l~~l~~~~~~G~~~G-~~~G~l~d~-~gp~~~l~iG~~~~~~GY~~~~l~~~~~i~~~~~~~ 98 (250)
T PF06813_consen 24 YSPQLKSRLGY---SQSQLNTLSTAGDIGSYFG-ILAGLLYDR-FGPWVVLLIGAVLGFVGYGLLWLAVSGRIPSLPVWL 98 (250)
T ss_pred hhHHHHHHhCC---CHHHHHHHHHHHHHHhhcc-HHHHHHHHh-cchHHHHHHHHHHHHHHHHHHHHHHhCccCccchHH
Confidence 37899999999 9999999999999999875 889999999 999999999999999998887654 46788
Q ss_pred HHHHHHHHhhcccchhhhhheeeEeeecCcchhhHHhHHHHHHHHHHHHHHHH-HHhccCCchHHHHHHHHHHHHHHHhH
Q 041759 172 YSLLRFFSGISRATIGTCTIVLLTEKVGTEWRGLVGILDSFFFTIGTLTLPAI-AYTNRSSSWTIIYLWTSIPTLVYSGL 250 (525)
Q Consensus 172 l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~l~~~l-~~~~~~~~wr~~f~~~~~~~~~~~~~ 250 (525)
+.+..++.|.+.+.....+.....+.+| ++||.+.++.-...+++..+-..+ ..+..+..-+..+.....+.++.+ +
T Consensus 99 ~~~~~~l~~~s~~~~~ta~lvt~~~NFP-~~RG~vvgilk~~~GLSaai~t~i~~~~f~~~~~~fll~la~~~~~v~l-~ 176 (250)
T PF06813_consen 99 MCLFLFLGGNSSCWFNTASLVTCVRNFP-RSRGTVVGILKGFFGLSAAIFTQIYSAFFGDDPSSFLLFLAVLPAVVCL-V 176 (250)
T ss_pred HHHHHHHHcccHHHhhhHHHHHHHHhCc-cccCceehhhhHHHHhHHHHHHHHHHHHcCCChHHHHHHHHHHHHHHHH-H
Confidence 8888899988877666666666667787 579999999999999998886665 445554334444444444444444 5
Q ss_pred hheeecCCc
Q 041759 251 LYIFVSESP 259 (525)
Q Consensus 251 ~~~~lpesp 259 (525)
...+++..|
T Consensus 177 ~~~~vr~~~ 185 (250)
T PF06813_consen 177 AMFFVRPVP 185 (250)
T ss_pred HhhheeccC
Confidence 555555443
No 210
>TIGR01272 gluP glucose/galactose transporter. Disruption of the loci leads to the total loss of glucose or galactose uptake in E.coli. Putative transporters in other bacterial species were isolated by functional complementation, which restored it functional activity.
Probab=98.90 E-value=2.6e-08 Score=94.49 Aligned_cols=133 Identities=9% Similarity=0.078 Sum_probs=105.4
Q ss_pred ccccccchhhhhhhHHHHHHHHHHHhHHhhHhcccccCCchHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHhhcccc
Q 041759 106 EWGLECSSAFIKGLPAASHFTGCLLGIVFLATLADSSLGRKNLLFLSCLTMSVATSLTIFSNNLWIYSLLRFFSGISRAT 185 (525)
Q Consensus 106 ~~~~~~~s~~~~g~~~s~~~lg~~~~~~~~G~l~dr~~Grk~~~~~~~~~~~i~~~~~~~~~~~~~l~~~r~l~G~~~~~ 185 (525)
.+|+ ++.+.++..+.+..+..+|.++.+++.|| +|+|+++.++..+..++.++....++... ..+-++.|++.+.
T Consensus 172 ~~g~---s~~~a~~~~s~~~~~~~iGr~~~~~l~~r-~g~~~~l~~~~~l~~~~~~l~~~~~~~~~-~~~~~l~g~~~s~ 246 (310)
T TIGR01272 172 ALGL---PEDQAAHFTAYTWGGAMVGRFIGSAVMPM-ISQGRYLAFNAFLAVLLSIGAALTHGYVA-MWFVLALGLFNSI 246 (310)
T ss_pred cCCC---CHHHHHHHHHHHHHHHHHHHHHHHHHHHH-hCHHHHHHHHHHHHHHHHHHHHHcCCHHH-HHHHHHHHHHHHH
Confidence 4688 89999999999999999999999999999 99999998888888887766666554433 3455688999999
Q ss_pred hhhhhheeeEeeecCcchhhHHhHHHHHHHHHHHHHHHH-HHhccCCchHHHHHHHHHHHH
Q 041759 186 IGTCTIVLLTEKVGTEWRGLVGILDSFFFTIGTLTLPAI-AYTNRSSSWTIIYLWTSIPTL 245 (525)
Q Consensus 186 ~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~l~~~l-~~~~~~~~wr~~f~~~~~~~~ 245 (525)
.+|...+...+..|++ .+.+.++. ....+|.++.|.+ |.+.+..|.+..|++..+..+
T Consensus 247 i~P~~~s~a~~~~~~~-~~~asai~-~~~~~Gg~i~P~l~G~lad~~g~~~a~~v~~~~~~ 305 (310)
T TIGR01272 247 MFPTIFSLALNALGRH-TSQGSGIL-CLAIVGGAIVPLLQGSLADCLGIQLAFALPVPCYL 305 (310)
T ss_pred HHHHHHHHHHhhhhhh-hhhhHHHH-HHHHhcchHHHHHHHHHHHhccchHHHHHHHHHHH
Confidence 9999998888877654 45666665 4566888888875 777787888888875544433
No 211
>KOG1330 consensus Sugar transporter/spinster transmembrane protein [Carbohydrate transport and metabolism]
Probab=98.90 E-value=7e-10 Score=105.02 Aligned_cols=174 Identities=11% Similarity=0.023 Sum_probs=127.9
Q ss_pred HHHHHHHHHHHHHHHHhhhhhccc----ccCChhHHHHHHHHHhcccccccCchhHHHHHHHHHhhcChhHHHHHHHHHH
Q 041759 326 RTLALMVPGFGIGVVYYGMTLGIE----NLGFDIYLGVVFNALLEIPNLASTIPSFFLTFFLIQKWNRKSSLLVLFIISG 401 (525)
Q Consensus 326 ~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~d~~g~~~~~~~~~~~~~ 401 (525)
..++.++......+--|.++-..+ .++.+....+++.....+ ...+++++.|++.||++|++++.+|..+-.
T Consensus 34 ~l~il~~vnlmny~Dr~~iagv~~~v~~~fni~~s~~Gll~~vf~v----~~~i~sPl~gyLadryNR~~v~~vG~~iW~ 109 (493)
T KOG1330|consen 34 TLVILCLVNLMNYADRYTIAGVLKEVQTYFNISDSELGLLQTVFIV----VFMIASPLFGYLADRYNRKRVIAVGIFIWT 109 (493)
T ss_pred HHHHHHHHHHHHHhhhhhhhhhhHHHHHhcCCCchhccchhHHHHH----HHHHHHHHHHHHHhhcCcceEEeeHHHHHH
Confidence 344444444444333344433332 256666666666666666 666999999999999999999999999999
Q ss_pred HHHHHHHHhccccccchhHHHHHHHHHHHHHHHHHHHHHhhhccccCcchhhhhhHHHHHHHHHHHHHHHHHHhh---cc
Q 041759 402 ICSIMAVVANDISNAGKRMRIGLELASLFSAYIAYTVIFIYAIELFPTCVRNSATSIMRLAIIFAAIFSSVLVAA---GS 478 (525)
Q Consensus 402 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~r~~~~~~~~~~~~~g~~~~p~i~~~---~~ 478 (525)
++.+...+.... +...++-.+.|.+.....|+..++++|.+|.++|++++++.+....+|..+|-..... ..
T Consensus 110 ~Av~~~~fs~~F-----wq~~l~R~~vGiGeAs~~~ia~s~IaD~f~~~~Rs~~~~ify~~ipvGsglG~vvgs~va~~~ 184 (493)
T KOG1330|consen 110 LAVFASGFSNHF-----WQVLLCRGFVGIGEASYSPIAPSLIADSFPDDKRSRVLGIFYFAIPVGSGLGYVVGSVVASLT 184 (493)
T ss_pred HHHHHHHHHHHH-----HHHHHHHHHhccchhhhcccchhHhhhcCcchhhhHHHHHhhhhcccccceeEEeeeeeccCc
Confidence 999988887444 5778888899999999999999999999999999999999999988777665444432 22
Q ss_pred CchhHHHHHHHHHHHHHHHHH-HhccCCCCC
Q 041759 479 NNEFVSYGVFGLVIICCGFFV-ICLPETRGS 508 (525)
Q Consensus 479 ~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~ 508 (525)
.++.+.|...+++.++..++. ++.+|.+++
T Consensus 185 ~~Wr~af~~~avl~vi~~~L~~~f~~eP~rg 215 (493)
T KOG1330|consen 185 FWWRWAFRGSAVLGVIVGLLVFLFVREPERG 215 (493)
T ss_pred cceEEEEEeehHHHHHHHHHHHhhccCcccc
Confidence 336778888888877776654 444555443
No 212
>PRK11902 ampG muropeptide transporter; Reviewed
Probab=98.90 E-value=1.2e-07 Score=93.97 Aligned_cols=164 Identities=15% Similarity=0.091 Sum_probs=118.8
Q ss_pred HHHHHHHhhhhhcccccCChhHHHHHHHHHhcccccccCchhHHHHHHHHHhh-----cChh-HHHHHHHHHHHHHHHHH
Q 041759 335 FGIGVVYYGMTLGIENLGFDIYLGVVFNALLEIPNLASTIPSFFLTFFLIQKW-----NRKS-SLLVLFIISGICSIMAV 408 (525)
Q Consensus 335 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~d~~-----g~~~-~~~~~~~~~~~~~~~~~ 408 (525)
...++....+|.++++.|.+..+.+.+..+... .+..++.|+++||+ |||+ .+.++..+.+++...+.
T Consensus 13 ~~~~~~~~~~~~~l~~~g~~~~~ig~~~~~~~~------~~~~~l~g~~~Dr~~~~~~g~rr~~l~~~~~~~~l~~~~l~ 86 (402)
T PRK11902 13 LPLALTSGTLQAWMTVEGLDIQTIGFFSLVGQA------YIFKFLWAPLMDRYTPPLLGRRRGWLLLTQVGLAASIAAMA 86 (402)
T ss_pred hhHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHH------HHHHHHHHHHHHcccccCCCcchhHHHHHHHHHHHHHHHHH
Confidence 344566677899999999999988877544332 27889999999999 7765 67777888877777766
Q ss_pred HhccccccchhHHHHHHHHHHHHHHHHHHHHHhhhccccCcchhhhhhHHHHHHHHHHHHHHHHHHhh-cc--CchhHHH
Q 041759 409 VANDISNAGKRMRIGLELASLFSAYIAYTVIFIYAIELFPTCVRNSATSIMRLAIIFAAIFSSVLVAA-GS--NNEFVSY 485 (525)
Q Consensus 409 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~r~~~~~~~~~~~~~g~~~~p~i~~~-~~--~~~~~~~ 485 (525)
+.... .+.+...+..++.+++.....+...+++.|..|+++|+++.++......+|.++++.+.+. .. .++...|
T Consensus 87 ~~~~~--~~~~~l~~~~~~~~~~~~~~~~~~~al~~~~~~~~~r~~~~~~~~~g~~~g~i~g~~l~~~l~~~~~gw~~~f 164 (402)
T PRK11902 87 FCPPH--AALWPLAGLAVLVAFLSASQDIVFDAYSTDVLHPEERGAGAAVKVLGYRLAMLVSGGLALWLADRVLGWGNTY 164 (402)
T ss_pred hcCcc--chHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcChhhhhHHHHHHHHHHHHHHHHHhHHHHHHHhcccCHHHHH
Confidence 65332 1233445454555666777778889999999999999999999998888898888877663 22 2567778
Q ss_pred HHHHHHHHHHHHHHHhccCCC
Q 041759 486 GVFGLVIICCGFFVICLPETR 506 (525)
Q Consensus 486 ~~~~~~~~~~~~~~~~~~~~~ 506 (525)
.+.+++.++..+..+..+|++
T Consensus 165 ~i~a~~~l~~~l~~~~~~e~~ 185 (402)
T PRK11902 165 LLMAGLMLAGALTTLWAPEPE 185 (402)
T ss_pred HHHHHHHHHHHHHHHhcCCCc
Confidence 777776666555555566543
No 213
>KOG2504 consensus Monocarboxylate transporter [Carbohydrate transport and metabolism]
Probab=98.88 E-value=7.3e-09 Score=103.91 Aligned_cols=152 Identities=20% Similarity=0.221 Sum_probs=135.0
Q ss_pred ccceeeccccccchhhhhhhHHHHHHHHHHHhHHhhHhcccccCC--chHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHH
Q 041759 100 ALTIISEWGLECSSAFIKGLPAASHFTGCLLGIVFLATLADSSLG--RKNLLFLSCLTMSVATSLTIFSNNLWIYSLLRF 177 (525)
Q Consensus 100 ~~~i~~~~~~~~~s~~~~g~~~s~~~lg~~~~~~~~G~l~dr~~G--rk~~~~~~~~~~~i~~~~~~~~~~~~~l~~~r~ 177 (525)
+|...++.+. ++.+.+.+.++..+.-.++.++.|+++|+ .. ++.+..+++++.+++.+.+++.++++.++..-+
T Consensus 321 l~~~~~~~g~---~~~~aa~l~Siigi~~i~gRi~~G~laD~-~~~~~~~~~~~~ll~~gl~~~~~p~~~~~~~l~~~~~ 396 (509)
T KOG2504|consen 321 LPSYAKSLGL---SSNDAAFLLSIIGVSDIIGRIILGLLADK-PGIRALVLFLLTLLIAGLARLFLPFATTYVGLIVFSI 396 (509)
T ss_pred HHHHHhhcCC---ChhhhHHHHHHHHHhhhhhhhhhhhhcCc-cccchHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHH
Confidence 8888999999 99999999999999999999999999999 77 455677888888999999999999999999999
Q ss_pred HHhhcccchhhhhheeeEeeecCcchhhHHhHHHHHHHHHHHHHHHH-HHhccCCc-hHHHHHHHHHHHHHHHhHhheee
Q 041759 178 FSGISRATIGTCTIVLLTEKVGTEWRGLVGILDSFFFTIGTLTLPAI-AYTNRSSS-WTIIYLWTSIPTLVYSGLLYIFV 255 (525)
Q Consensus 178 l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~l~~~l-~~~~~~~~-wr~~f~~~~~~~~~~~~~~~~~l 255 (525)
+.|+..|.........+.|+.+.++-..+.|+...+.+++.++||.+ +.+.+..+ |...|+..++..++.. ..++..
T Consensus 397 ~fG~~~g~~~~l~~~i~~~~~g~~~l~~a~Gl~l~~~gi~~l~gpPiag~~~d~tg~Y~~~f~~~g~~~~~s~-~~~~~~ 475 (509)
T KOG2504|consen 397 LFGFCVGSFSSLTPVILVDLVGLEKLSNAYGLLLLFQGIGALVGPPIAGLLYDITGNYDHAFYFCGLCFLLSA-VLLLIL 475 (509)
T ss_pred HHHHHHHHHHHHHHHHHHHHcChhhcchHHHHHHHHhHHHHHcCcccceeeeeccCCeeeehhhcChHHHHHH-HHHHHh
Confidence 99999999888888899999999999999999999999999999988 54444444 9999999999888887 566555
Q ss_pred c
Q 041759 256 S 256 (525)
Q Consensus 256 p 256 (525)
|
T Consensus 476 ~ 476 (509)
T KOG2504|consen 476 R 476 (509)
T ss_pred H
Confidence 5
No 214
>COG2270 Permeases of the major facilitator superfamily [General function prediction only]
Probab=98.87 E-value=1.9e-08 Score=94.62 Aligned_cols=150 Identities=19% Similarity=0.143 Sum_probs=131.3
Q ss_pred eeccccccchhhhhhhHHHHHHHHHHHhHHhhHhcccccCCchHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHhhcc
Q 041759 104 ISEWGLECSSAFIKGLPAASHFTGCLLGIVFLATLADSSLGRKNLLFLSCLTMSVATSLTIFSNNLWIYSLLRFFSGISR 183 (525)
Q Consensus 104 ~~~~~~~~~s~~~~g~~~s~~~lg~~~~~~~~G~l~dr~~Grk~~~~~~~~~~~i~~~~~~~~~~~~~l~~~r~l~G~~~ 183 (525)
+.++|+ +..+..++.....+.+++|++++|+|.|| +|.|+++.+++++..+.++...+...-..+.+.-.+.|...
T Consensus 280 ~~~~gl---s~~~lll~g~~~~vvA~lg~ii~g~Ld~r-fg~k~vl~~~lvi~~~~~~~~~~~~~~~~f~i~gll~g~s~ 355 (438)
T COG2270 280 AADLGL---SSTELLLIGIALSVVAALGAIIAGFLDER-FGSKPVLMIGLVILSIAALYLIFLEGELDFWILGLLVGTSL 355 (438)
T ss_pred HHHcCc---cHHHHHHHHHHHHHHHHHHHHHHHHHHHH-hCCceeehHHHHHHHHHHHHHHHccccHHHHHHHHHHHHhc
Confidence 348999 99999999999999999999999999999 99999999999999999998888877777888889999999
Q ss_pred cchhhhhheeeEeeecCcchhhHHhHHHHHHHHHHHHHHHH-HHhcc-CCchHHHHHHHHHHHHHHHhHhheeecCC
Q 041759 184 ATIGTCTIVLLTEKVGTEWRGLVGILDSFFFTIGTLTLPAI-AYTNR-SSSWTIIYLWTSIPTLVYSGLLYIFVSES 258 (525)
Q Consensus 184 ~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~l~~~l-~~~~~-~~~wr~~f~~~~~~~~~~~~~~~~~lpes 258 (525)
|..+..+-+|..+..|+++-++.+++++...-.+..+||.+ +.+.. ..+-|.-+....++.++.+ +....+|+.
T Consensus 356 G~~qA~SRSy~~~lvp~~k~~~fFglyaltgra~S~~gp~lv~v~t~iTg~~r~g~~~i~vll~iGl-~~L~~v~~~ 431 (438)
T COG2270 356 GGAQASSRSYLARLVPKGKEGRFFGLYALTGRAASFLGPFLVAVITQITGSSRAGVLSIIVLLLIGL-LLLLRVKVP 431 (438)
T ss_pred chHHHHHHHHHHHhCCCccccceeehhhhhhhHHHHHHHHHHHHHHHHhcchhhHHHHHHHHHHhhH-hhEEeecCC
Confidence 99999999999999999999999999999999999999988 54432 3467777777777766666 666666653
No 215
>KOG0569 consensus Permease of the major facilitator superfamily [Carbohydrate transport and metabolism]
Probab=98.86 E-value=2.8e-08 Score=97.44 Aligned_cols=155 Identities=19% Similarity=0.161 Sum_probs=115.3
Q ss_pred ccceeeccccccchhhhhhhHHHHHHHHHHHhHHhhHhcccccCCchHHHHHHHHHHHHHHHHHHhh---hhHH------
Q 041759 100 ALTIISEWGLECSSAFIKGLPAASHFTGCLLGIVFLATLADSSLGRKNLLFLSCLTMSVATSLTIFS---NNLW------ 170 (525)
Q Consensus 100 ~~~i~~~~~~~~~s~~~~g~~~s~~~lg~~~~~~~~G~l~dr~~Grk~~~~~~~~~~~i~~~~~~~~---~~~~------ 170 (525)
...+-++-|+ +..+..+......+...++.+++..+.|| +|||+.++++..+..+..+++... .+..
T Consensus 293 st~i~~~aG~---~~~~a~~an~~~g~v~~~~t~~~~~lid~-~gRRpLll~~~~~~~~~~~~~~~~~~l~~~~~~~~~y 368 (485)
T KOG0569|consen 293 STSIFKTAGF---TPEEAQYANLGIGIVNLLSTLVSPFLIDR-LGRRPLLLISLSLMAVALLLMSIALFLSNSFGSWLSY 368 (485)
T ss_pred HHHHHHHcCC---CHHHHHHHHHHHHHHHHHHHHHHHHHHHh-cCCcHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHH
Confidence 4567777888 88899999999999999999999999999 999999999999998888776653 1111
Q ss_pred HHHHHHHHHhhcccc-hhhhhheeeEeeecCcchhhHHhHHHHHHHHHHHHHHHH-HHhccCCchHHHHHHHHHHHHHHH
Q 041759 171 IYSLLRFFSGISRAT-IGTCTIVLLTEKVGTEWRGLVGILDSFFFTIGTLTLPAI-AYTNRSSSWTIIYLWTSIPTLVYS 248 (525)
Q Consensus 171 ~l~~~r~l~G~~~~~-~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~l~~~l-~~~~~~~~wr~~f~~~~~~~~~~~ 248 (525)
..+++.++..++.+. .-|...-+.+|.+|++.|..++++.....-+..++-... -.+-...|- +.|++..+++++..
T Consensus 369 ~~i~~~~~~~~~f~~G~gpi~~fi~aELf~~~~R~aa~s~~~~~~w~~~fiv~~~fp~l~~~~g~-~~filF~i~~~~~~ 447 (485)
T KOG0569|consen 369 LCIAAIFLFIISFAIGPGPIPWFIGAELFPQSARSAAQSVATAVNWLSNFIVGFAFPPLQNVIGP-YVFILFVIPLAIFL 447 (485)
T ss_pred HHHHHHHHHHHhhhcCCCchhHHHHHHhCCccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcc-hhhHHHHHHHHHHH
Confidence 123333333333322 356777788999999999999998888777777654433 222222233 77888888888888
Q ss_pred hHhheeecCCc
Q 041759 249 GLLYIFVSESP 259 (525)
Q Consensus 249 ~~~~~~lpesp 259 (525)
+..++.+|||.
T Consensus 448 i~~~~~lPETk 458 (485)
T KOG0569|consen 448 IYLYRYLPETK 458 (485)
T ss_pred HHHHHhCcccC
Confidence 78999999984
No 216
>KOG4332 consensus Predicted sugar transporter [Carbohydrate transport and metabolism]
Probab=98.86 E-value=8.4e-08 Score=84.04 Aligned_cols=347 Identities=13% Similarity=0.094 Sum_probs=179.9
Q ss_pred ccceeeccccccchhhhhhhHHHHHHHHHHHhHHhhHhcccccCCchHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHH
Q 041759 100 ALTIISEWGLECSSAFIKGLPAASHFTGCLLGIVFLATLADSSLGRKNLLFLSCLTMSVATSLTIFSNNLWIYSLLRFFS 179 (525)
Q Consensus 100 ~~~i~~~~~~~~~s~~~~g~~~s~~~lg~~~~~~~~G~l~dr~~Grk~~~~~~~~~~~i~~~~~~~~~~~~~l~~~r~l~ 179 (525)
.-.+.+.++. .+.++|.+.-...-...+...+.|-++|+ -|||+.-+.-++.++++++ +-.++.|-.++++|++-
T Consensus 60 vYyLYstYgF---gkG~IgqLfiaGfgSsmLFGtivgSLaDk-qGRKracvtycitYiLsCi-TKhSpqYkVLmVGR~LG 134 (454)
T KOG4332|consen 60 VYYLYSTYGF---GKGDIGQLFIAGFGSSMLFGTIVGSLADK-QGRKRACVTYCITYILSCI-TKHSPQYKVLMVGRVLG 134 (454)
T ss_pred eeeeehhcCc---cCCccceeeecccchHHHHHHHHHHHHhh-hccccceeeehHHHHHHHH-hhcCCceEEEeehhhhh
Confidence 4456677888 88888888887777788888899999999 9999965544444444332 33467888999999999
Q ss_pred hhcccchhhhhhee-eEeeecCcchhhHHhHHH--------HHHHHHHHHHHHHHHhc-c--CCchHHHHHHHHHHHHHH
Q 041759 180 GISRATIGTCTIVL-LTEKVGTEWRGLVGILDS--------FFFTIGTLTLPAIAYTN-R--SSSWTIIYLWTSIPTLVY 247 (525)
Q Consensus 180 G~~~~~~~~~~~~~-i~~~~~~~~r~~~~~~~~--------~~~~~G~~l~~~l~~~~-~--~~~wr~~f~~~~~~~~~~ 247 (525)
|++.+..+....++ +.|.-+ +|+.-.-+.. .+..+-.+++.+.+-.+ + ..|--.+|-..+.+..+.
T Consensus 135 GiaTsLLFSaFEsWliaEHne--kr~FeqqWls~TFskA~ffgNglvAiiaGlfgn~lvd~~slGPVAPFdAAacfLaig 212 (454)
T KOG4332|consen 135 GIATSLLFSAFESWLIAEHNE--KRGFEQQWLSVTFSKAVFFGNGLVAIIAGLFGNLLVDTFSLGPVAPFDAAACFLAIG 212 (454)
T ss_pred hHHHHHHHHHHHHHHHHHhhh--ccCChHhhhhHHHHHHHHhhccHHHHHHHHHHHHHHHHhccCCCCchHHHHHHHHHH
Confidence 99999888887775 455442 2332221211 12222222333332222 1 234445554444433333
Q ss_pred HhHhheeecCCchHhhhcCCHHHHHHHHHhhCCCcCCccchhhhhhhccCCCCcccccccccchhhhhhhhcchhHHHHH
Q 041759 248 SGLLYIFVSESPRWLFMQGRQEEAVEVIKSLSPIKDSNQLSLSLVSAVSFGHEPAASSKESSFLSSIRELFVRRWALERT 327 (525)
Q Consensus 248 ~~~~~~~lpesp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~ 327 (525)
..+..- .|-..-+++.+.++.+++. + ...+.+..+++ ..
T Consensus 213 mAvil~------~W~ENygdps~~kdlltqf-~-------------------------------gaa~aiaSD~k---i~ 251 (454)
T KOG4332|consen 213 MAVILS------SWSENYGDPSENKDLLTQF-K-------------------------------GAARAIASDEK---IA 251 (454)
T ss_pred HHHHHh------hhhhccCChhhhHHHHHHh-h-------------------------------HhHHHHhcchH---HH
Confidence 212211 1222223333333333332 1 23344455543 22
Q ss_pred HHHHHHHHHHHHHHhhhhhcccccCChhHH--HHHHHHHhcccccccCchhHHHHHHHHHhhcCh--hHHHHHHHHHHHH
Q 041759 328 LALMVPGFGIGVVYYGMTLGIENLGFDIYL--GVVFNALLEIPNLASTIPSFFLTFFLIQKWNRK--SSLLVLFIISGIC 403 (525)
Q Consensus 328 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~l~d~~g~~--~~~~~~~~~~~~~ 403 (525)
+...+-...-+..+...-.|.+.+..++.. -+++.+-..+ ++++|+-+..++..|-..| ..+.+.+.+....
T Consensus 252 LLG~iqsLFE~smytFVFLWTPaLspn~e~iPhGfiFatFMl----ASmLGSSla~Rl~s~s~~~ve~ymqivf~vs~a~ 327 (454)
T KOG4332|consen 252 LLGAIQSLFEGSMYTFVFLWTPALSPNDEEIPHGFIFATFML----ASMLGSSLASRLLSRSSPKVESYMQIVFLVSIAA 327 (454)
T ss_pred HHHHHHHHHhhhhheeeeeecccCCCCcccCCchhHHHHHHH----HHHHhhHHHHHHHhcCCcccchHHHHHHHHHHHH
Confidence 333333333333333333344433322111 2333333333 3445655555555443322 3344444444443
Q ss_pred HHHHHHhc--cccccchhHHHHHHHHHHHHHHHHHHHHHhhhccccCcchhhhhhHHHHHHHHHHHHHHHHHHhhcc--C
Q 041759 404 SIMAVVAN--DISNAGKRMRIGLELASLFSAYIAYTVIFIYAIELFPTCVRNSATSIMRLAIIFAAIFSSVLVAAGS--N 479 (525)
Q Consensus 404 ~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~r~~~~~~~~~~~~~g~~~~p~i~~~~~--~ 479 (525)
+.+..... ...+.+....++..+++-.+.+..||...-+-.+..|.+.|++.+-+...--++-.-++-+...... .
T Consensus 328 l~Lpilt~~vsP~kes~~~s~i~F~~~E~cvGlfwPSimkmRsqyIPEearstimNfFRvPLnifvClvLynlh~~~~p~ 407 (454)
T KOG4332|consen 328 LLLPILTSSVSPSKESPSESLIGFCLFEACVGLFWPSIMKMRSQYIPEEARSTIMNFFRVPLNIFVCLVLYNLHVDAFPT 407 (454)
T ss_pred HHHHHHHhccCCCcCCchHHHHHHHHHHHHHhhcchHHHHHHHhhCCHHHHhhhhhheechhhHhhhhhheecccccCcc
Confidence 33332221 2212334445666777778889999999999999999999988776554433222222222211111 1
Q ss_pred chhHHHHHHHHHHHHHHHH
Q 041759 480 NEFVSYGVFGLVIICCGFF 498 (525)
Q Consensus 480 ~~~~~~~~~~~~~~~~~~~ 498 (525)
+....|.++.+...++.+.
T Consensus 408 ~tr~mf~icS~~~~~a~i~ 426 (454)
T KOG4332|consen 408 TTRNMFGICSAFLFVASIL 426 (454)
T ss_pred ccchhhhhhHHHHHHHHHH
Confidence 2345666666666655443
No 217
>KOG0253 consensus Synaptic vesicle transporter SV2 (major facilitator superfamily) [General function prediction only]
Probab=98.85 E-value=1.4e-08 Score=93.18 Aligned_cols=129 Identities=18% Similarity=0.114 Sum_probs=97.0
Q ss_pred HHHHHHhHHhhHhcccccCCchHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHhhcccchhhhhheeeEeeecCcchh
Q 041759 125 FTGCLLGIVFLATLADSSLGRKNLLFLSCLTMSVATSLTIFSNNLWIYSLLRFFSGISRATIGTCTIVLLTEKVGTEWRG 204 (525)
Q Consensus 125 ~lg~~~~~~~~G~l~dr~~Grk~~~~~~~~~~~i~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~ 204 (525)
.+.-.-|.++.+++.|| +|||+.|-...+++++..++.....+-....+.-+..-+...+.+.+.+.|..|.+|.+-|+
T Consensus 391 slaefPGlLIt~~iver-lGRKkTMal~l~~f~iflfll~~c~~rn~~tvllf~arafisg~fqvaYvYtPEVyPTavRa 469 (528)
T KOG0253|consen 391 SLAEFPGLLITGVIVER-LGRKKTMALSLILFGIFLFLLTTCKTRNAYTVLLFTARAFISGAFQVAYVYTPEVYPTAVRA 469 (528)
T ss_pred HHhhCCchhHHHHHHHH-hcchhHHHHHHHHHHHHHHHHHHhcCcchhHHHHHHHHHHHhchheEEEEecCcccchhhhh
Confidence 34556677899999999 99999999999999999998877654333333333333334445667889999999999999
Q ss_pred hHHhHHHHHHHHHHHHHHHHHHhccCCchHHHHHHHHHHHHHHHhHhheeec
Q 041759 205 LVGILDSFFFTIGTLTLPAIAYTNRSSSWTIIYLWTSIPTLVYSGLLYIFVS 256 (525)
Q Consensus 205 ~~~~~~~~~~~~G~~l~~~l~~~~~~~~wr~~f~~~~~~~~~~~~~~~~~lp 256 (525)
...|.-+...-+|.++.|+++... +..-..+..+.+..+++.. +...++|
T Consensus 470 tgvGtcSsmaRIggI~~p~iA~~~-e~s~sl~i~vy~~~~ilag-IavcffP 519 (528)
T KOG0253|consen 470 TGVGTCSSMARIGGIFSPVIAMRA-ELSTSLPIFVYGALFILAG-IAVCFFP 519 (528)
T ss_pred cchhhhhhHHhhhhhhhhHHHHHh-ccceeehHHHHHHHHHHHH-HHheeee
Confidence 999999999999999999998433 3344455566666666666 5556666
No 218
>PF06963 FPN1: Ferroportin1 (FPN1); InterPro: IPR009716 This entry represents the solute carrier family 40 member 1 family of proteins, also known as Ferroportin 1. It is thought to be involved in iron export from duodenal epithelial cells and also in transfer of iron between maternal and fetal circulation. This family of proteins is known to be localised in the basolateral membrane of polarized epithelial cells [].; GO: 0005381 iron ion transmembrane transporter activity, 0034755 iron ion transmembrane transport, 0016021 integral to membrane
Probab=98.85 E-value=2.3e-06 Score=83.56 Aligned_cols=336 Identities=13% Similarity=0.056 Sum_probs=177.7
Q ss_pred hhHHHHHHHHHHHhHHhhHhcccccCCchHHHHHHHHHHHHHHHHHH------hh--h-----h--HHHHHHHHHHHhhc
Q 041759 118 GLPAASHFTGCLLGIVFLATLADSSLGRKNLLFLSCLTMSVATSLTI------FS--N-----N--LWIYSLLRFFSGIS 182 (525)
Q Consensus 118 g~~~s~~~lg~~~~~~~~G~l~dr~~Grk~~~~~~~~~~~i~~~~~~------~~--~-----~--~~~l~~~r~l~G~~ 182 (525)
+...-.-.+...+.++..|.+.|| ..|++++..+++..-++..+.+ +. . + ...+++.-.+.|.-
T Consensus 41 siygl~~~~~~~~f~~~vG~~iD~-~~Rl~~~~~~l~~Qn~sv~~s~~~~~~l~~~~~~~~~~~~~~~~l~~~~~~~~~i 119 (432)
T PF06963_consen 41 SIYGLVRSLSAILFGPWVGRWIDR-SPRLKVIRTSLVVQNLSVAASCALFLLLLSYPSSSSQSSWLFIALFALLILLGAI 119 (432)
T ss_pred HHHHHHHHHHHHHhhHHHHHHHhC-CcchhhHHHHHHHHHHHHHHHHHHHHHHHhCCccccccchHHHHHHHHHHHHHHH
Confidence 333444455667778889999999 9999988877765433322221 11 1 1 11222222222222
Q ss_pred ccch-hhhhheeeEeeec------CcchhhHHhHHHHHHHHHHHHHHHH-HHhccCCchHHHHHHHHHHHHHHHhHhhee
Q 041759 183 RATI-GTCTIVLLTEKVG------TEWRGLVGILDSFFFTIGTLTLPAI-AYTNRSSSWTIIYLWTSIPTLVYSGLLYIF 254 (525)
Q Consensus 183 ~~~~-~~~~~~~i~~~~~------~~~r~~~~~~~~~~~~~G~~l~~~l-~~~~~~~~wr~~f~~~~~~~~~~~~~~~~~ 254 (525)
.-.. .....+.=.||.. ++.+.+..+...-.=.+-.+++|++ |.+....+.+....+.+...++..++=+++
T Consensus 120 ~~Las~~~~iavERDWVvvi~~~~~~~La~~NA~mRRIDL~ckllaPl~vG~l~t~~s~~~~~~~i~~~N~~S~~vEy~~ 199 (432)
T PF06963_consen 120 ERLASIANTIAVERDWVVVIAGGDPGALARMNATMRRIDLFCKLLAPLFVGLLMTFASPVIAAIFIAGWNLASVFVEYFL 199 (432)
T ss_pred HHHHHhhhhheeccchhhhhcCCChhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCHHHHHHHHHHHHHHHHHHHHHH
Confidence 2211 1222222345542 3344455555555556678889988 666666788888877777777766443433
Q ss_pred ec----CCchHhhhcCCHHHHHHHHHhhCCCcCCccchhhhhhhccCCCCcc--cc--cccccchhhhhhhhcchhHHHH
Q 041759 255 VS----ESPRWLFMQGRQEEAVEVIKSLSPIKDSNQLSLSLVSAVSFGHEPA--AS--SKESSFLSSIRELFVRRWALER 326 (525)
Q Consensus 255 lp----esp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~--~~~~~~~~~~~~l~~~~~~~~~ 326 (525)
+. ..|. +..+++.++. +.+.+++ +..++.++.. ++ +.-.+....++..+++|.+...
T Consensus 200 l~~VY~~~P~-L~~~~~~~~~------------~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~w~~Y~~q~vflas 264 (432)
T PF06963_consen 200 LARVYNSVPA-LAVKKRSSES------------ESSSDEE--SSSESSSDPSILKRLWNPLRTIIRGWRTYFRQPVFLAS 264 (432)
T ss_pred HHHHHHhChH-hcCCCCCccc------------ccccccc--ccccccchhhHHHHHHHHHHHHhccHHHHHhCHHHHHH
Confidence 32 1121 0000000000 0000000 0000000000 00 0000011345566666654443
Q ss_pred HHHHHHHHHHHHHHHhhhhhcccccCChhHHHHHHHHHhcccccccCchhHHHHHHHHHhhcChhHHHHHHHHHHHHHHH
Q 041759 327 TLALMVPGFGIGVVYYGMTLGIENLGFDIYLGVVFNALLEIPNLASTIPSFFLTFFLIQKWNRKSSLLVLFIISGICSIM 406 (525)
Q Consensus 327 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~d~~g~~~~~~~~~~~~~~~~~~ 406 (525)
+-..++.....++ ...+.-|+...|++....+..-++..+ .++.|+++..++.+|+|..+.-.++...-..++.+
T Consensus 265 ~alalLY~TVLsf-~~lmt~yl~~~G~s~~~igi~R~~gav----~Gl~gT~~~p~l~~riGlvr~G~~~l~~q~~~L~~ 339 (432)
T PF06963_consen 265 FALALLYFTVLSF-GGLMTAYLKSQGYSPSVIGIFRGLGAV----FGLLGTWVYPWLMKRIGLVRAGLWSLWWQWVCLAL 339 (432)
T ss_pred HHHHHHHHHHhcC-cHHHHHHHHHCCCCHHHHHHHHHHHHH----HHHHHHHHHHHHHHHhcchhhHHHHHHHHHHHHHH
Confidence 3333333222222 222233455559998888888777777 77799999999999999888777776654433332
Q ss_pred HH---Hhcccc--ccchhHHHHHHHHHHHHHHHHHHHHHhhhccccCcchhhhhhHHHHHHHHHHHHHHHHHH
Q 041759 407 AV---VANDIS--NAGKRMRIGLELASLFSAYIAYTVIFIYAIELFPTCVRNSATSIMRLAIIFAAIFSSVLV 474 (525)
Q Consensus 407 ~~---~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~r~~~~~~~~~~~~~g~~~~p~i~ 474 (525)
.. +.+..+ ..+...++....+..+|.=..--...-+..|..|+++||+..|+-+...++...+.-.+.
T Consensus 340 ~v~~~~~~~~~~~~~s~~~l~~gi~~SR~GLW~fDL~~~qi~Qe~V~~~~Rg~v~gvq~sl~~lf~ll~~~~~ 412 (432)
T PF06963_consen 340 CVVSFWAPGSPFSSISAYLLLGGIALSRIGLWSFDLAVTQIMQENVPESERGAVSGVQNSLQSLFELLSFVLT 412 (432)
T ss_pred HHHHHhcCCCCchhhHHHHHHHHHHHHHHHHHhhhHHHHHhhcccCCHHHhhHHHHHHHHHHHHHHHHHHHHH
Confidence 22 222220 112223444445555555455556777889999999999999999998887776655444
No 219
>TIGR00805 oat sodium-independent organic anion transporter. Proteins of the OAT family catalyze the Na+-independent facilitated transport of organic anions such as bromosulfobromophthalein and prostaglandins as well as conjugated and unconjugated bile acids (taurocholate and cholate, respectively). These transporters have been characterized in mammals, but homologues are present in C. elegans and A. thaliana. Some of the mammalian proteins exhibit a high degree of tissue specificity. For example, the rat OAT is found at high levels in liver and kidney and at lower levels in other tissues. These proteins possess 10-12 putative a-helical transmembrane spanners. They may catalyze electrogenic anion uniport or anion exchange.
Probab=98.84 E-value=1.4e-08 Score=105.61 Aligned_cols=131 Identities=12% Similarity=0.074 Sum_probs=107.6
Q ss_pred hhhhhcccccCChhHHHHHHHHHhcccccccCchhHHHHHHHHHhhcChhHHHHHHHHHHHHHHHHHHhccc--------
Q 041759 342 YGMTLGIENLGFDIYLGVVFNALLEIPNLASTIPSFFLTFFLIQKWNRKSSLLVLFIISGICSIMAVVANDI-------- 413 (525)
Q Consensus 342 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~d~~g~~~~~~~~~~~~~~~~~~~~~~~~~-------- 413 (525)
..++.+.++++.+..+.+.+.+...+ +.+++.++.+++.||.+||+++.++.++.+++.++..+....
T Consensus 54 ~~l~~iek~F~lss~~~G~i~s~~~i----~~~~~~i~v~~~~~r~~r~~~i~~g~ll~~lg~ll~alphf~~~~y~~~~ 129 (633)
T TIGR00805 54 SSLTTIERRFKLSTSSSGLINGSYEI----GNLLLIIFVSYFGTKLHRPIVIGIGCAIMGLGSFLLSLPHFLSGRYSYST 129 (633)
T ss_pred hhchhhhhhhCCCCCcceeeeehhhH----HHHHHHHHHHHhhcccCcceEEEecHHHHHHHHHHHhChHHhcCCccccc
Confidence 34466667788888888888888777 888999999999999999999999999999998887654200
Q ss_pred ------------------c--------------------ccchhHHHHHHHHHHHHHHHHHHHHHhhhccccCcchhhhh
Q 041759 414 ------------------S--------------------NAGKRMRIGLELASLFSAYIAYTVIFIYAIELFPTCVRNSA 455 (525)
Q Consensus 414 ------------------~--------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~r~~~ 455 (525)
. ...+..+++.-++.|++.+..++...+++.|.+|++.|+..
T Consensus 130 ~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~l~GiG~~~~~~~~~~~i~d~~~~~~~~~~ 209 (633)
T TIGR00805 130 TVSSTGNLSSANSFLCMENLTQALRPTQCPSECQKQHKESLMWLLFLVSQLLRGIGATPIFPLGISYIDDFAKSKNSPLY 209 (633)
T ss_pred cccccccccccccccccCCCCCCccccccccccccccCCCceehhhHHHHHHHhccCCcchhcCchhhhccCCccccHHH
Confidence 0 01234566778888888888889999999999999999999
Q ss_pred hHHHHHHHHHHHHHHHHHHhh
Q 041759 456 TSIMRLAIIFAAIFSSVLVAA 476 (525)
Q Consensus 456 ~~~~~~~~~~g~~~~p~i~~~ 476 (525)
.++.+....+|..+++++.+.
T Consensus 210 ~~i~~~~~~iG~~lG~llgg~ 230 (633)
T TIGR00805 210 IGILESIAVFGPAFGYLLGSF 230 (633)
T ss_pred HHHHHHHHHhhhHHHHHHHHH
Confidence 999999999999999888773
No 220
>PRK10429 melibiose:sodium symporter; Provisional
Probab=98.84 E-value=1.8e-07 Score=94.76 Aligned_cols=115 Identities=10% Similarity=0.119 Sum_probs=91.7
Q ss_pred hhhhhhhHHHHHHHHHHHhHHhhHhcccccCCchHHHHHHHHHHHHHHHHHHh-----hhhHHHHHHHHHHHhhcccchh
Q 041759 113 SAFIKGLPAASHFTGCLLGIVFLATLADSSLGRKNLLFLSCLTMSVATSLTIF-----SNNLWIYSLLRFFSGISRATIG 187 (525)
Q Consensus 113 s~~~~g~~~s~~~lg~~~~~~~~G~l~dr~~Grk~~~~~~~~~~~i~~~~~~~-----~~~~~~l~~~r~l~G~~~~~~~ 187 (525)
+....+++.+...++..++.+++++++|| +|+|+.+.++.++..++.+...+ .++.+.+++.-++.|++.+...
T Consensus 264 ~~~~~~~~~~~~~i~~ii~~~~~~~l~~r-~gkk~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~g~~~~~~~ 342 (473)
T PRK10429 264 DADLFPYYLSYAGAANLVTLILFPRLVKS-LSRRILWAGASIFPVLSCGVLLLMGLAAPHNALLIVIAGILLNIGTALFW 342 (473)
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHHHH-cCcHHHHHHHHHHHHHHHHHHHHHhccCchhHHHHHHHHHHHHHHHHHHH
Confidence 44566777777778999999999999999 99999999888877766655432 3456777778889999999999
Q ss_pred hhhheeeEeeec-------CcchhhHHhHHHHHHHHHHHHHHHH-HHhc
Q 041759 188 TCTIVLLTEKVG-------TEWRGLVGILDSFFFTIGTLTLPAI-AYTN 228 (525)
Q Consensus 188 ~~~~~~i~~~~~-------~~~r~~~~~~~~~~~~~G~~l~~~l-~~~~ 228 (525)
+...++++|..+ +++.|..++......-+|..+++.+ +.++
T Consensus 343 ~~~~am~ad~id~~e~~tG~R~~G~~~s~~~~~~K~~~al~~~i~g~~l 391 (473)
T PRK10429 343 VLQVIMVADTVDYGEYKLGIRCESIAYSVQTMVVKGGSAFAAFFIGVVL 391 (473)
T ss_pred HHHHHHHhhhhhhhhHhcCccchhHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 999999999865 3445668899999999999998877 4444
No 221
>PRK09848 glucuronide transporter; Provisional
Probab=98.84 E-value=1.3e-07 Score=95.26 Aligned_cols=121 Identities=17% Similarity=0.147 Sum_probs=98.0
Q ss_pred eeccccccchhhhhhhHHHHHHHHHHHhHHhhHhcccccCCchHHHHHHHHHHHHHHHHHHhhh--hHHHHHHHHHHHhh
Q 041759 104 ISEWGLECSSAFIKGLPAASHFTGCLLGIVFLATLADSSLGRKNLLFLSCLTMSVATSLTIFSN--NLWIYSLLRFFSGI 181 (525)
Q Consensus 104 ~~~~~~~~~s~~~~g~~~s~~~lg~~~~~~~~G~l~dr~~Grk~~~~~~~~~~~i~~~~~~~~~--~~~~l~~~r~l~G~ 181 (525)
++.+|. ++...++......++..++.++.+++.|| +|+|+++.++.++.+++.++..+.+ +++.+++..++.|+
T Consensus 256 ~~~~g~---~~~~~~~~~~~~~~~~~~~~~l~~~l~~r-~g~~~~~~~g~~~~~i~~~~~~~~~~~~~~~~~~~~~l~g~ 331 (448)
T PRK09848 256 RYVLND---TGLFTVLVLVQNLVGTVASAPLVPGMVAR-IGKKNTFLIGALLGTCGYLLFFWVSVWSLPVALVALAIASI 331 (448)
T ss_pred eeecCC---hHHHHHHHHHHHHHHHHHHHHHHHHHHHH-hCcHHHHHHHHHHHHHHHHHHHHcCchhHHHHHHHHHHHHH
Confidence 445666 66555555555577888899999999999 9999999999999888887777653 67777788889999
Q ss_pred cccchhhhhheeeEeeecCc-------chhhHHhHHHHHHHHHHHHHHHH-HHhc
Q 041759 182 SRATIGTCTIVLLTEKVGTE-------WRGLVGILDSFFFTIGTLTLPAI-AYTN 228 (525)
Q Consensus 182 ~~~~~~~~~~~~i~~~~~~~-------~r~~~~~~~~~~~~~G~~l~~~l-~~~~ 228 (525)
|.+...+...++.+|..+.+ ++|...+..+....+|..+|+.+ +.++
T Consensus 332 G~~~~~~~~~al~~~~~~~~~~~~g~r~~G~~~~~~~~~~klg~aig~~i~g~~l 386 (448)
T PRK09848 332 GQGVTMTVMWALEADTVEYGEYLTGVRIEGLTYSLFSFTRKCGQAIGGSIPAFIL 386 (448)
T ss_pred HHHHHHHHHHHHHHHhhhhhHHhhCccchhHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999988887643 45888999999999999998877 4443
No 222
>TIGR00769 AAA ADP/ATP carrier protein family. These proteins are members of the ATP:ADP Antiporter (AAA) Family (TC 2.A.12), which consists of nucleotide transporters that have 12 GES predicted transmembrane regions. One protein from Rickettsia prowazekii functions to take up ATP from the eukaryotic cell cytoplasm into the bacterium in exchange for ADP. Five AAA family paralogues are encoded within the genome of R. prowazekii. This organism transports UMP and GMP but not CMP, and it seems likely that one or more of the AAA family paralogues are responsible. The genome of Chlamydia trachomatis encodes two AAA family members, Npt1 and Npt2, which catalyse ATP/ADP exchange and GTP, CTP, ATP and UTP uptake probably employing a proton symport mechanism. Two homologous adenylate translocators of Arabidopsis thaliana are postulated to be localized to the intracellular plastid membrane where they function as ATP importers.
Probab=98.84 E-value=2.8e-05 Score=76.96 Aligned_cols=272 Identities=11% Similarity=0.091 Sum_probs=154.6
Q ss_pred ccceeeccccccc--hhhhhhhHHHHHHHHHHHh-HHhhHhcccccCCchHHHHHHHHHHHHHHHHHHhh----h-----
Q 041759 100 ALTIISEWGLECS--SAFIKGLPAASHFTGCLLG-IVFLATLADSSLGRKNLLFLSCLTMSVATSLTIFS----N----- 167 (525)
Q Consensus 100 ~~~i~~~~~~~~~--s~~~~g~~~s~~~lg~~~~-~~~~G~l~dr~~Grk~~~~~~~~~~~i~~~~~~~~----~----- 167 (525)
+-++++.+.+... +...+.++-+...+..++. .++.+++++| ++|++++-+....+....++.++. +
T Consensus 26 LR~lKD~lvv~~~~~gae~i~fLk~~~~lp~~~~~~~ly~~l~~~-~~~~~lf~~~~~~F~~~f~lF~~vl~p~~~~~~p 104 (472)
T TIGR00769 26 LRDTKDTLVVTAKGSGAEIIPFLKTWVVVPMAVIFMLIYTKLSNI-LSKEALFYTVISPFLGFFALFAFVIYPLSDLLHP 104 (472)
T ss_pred HHhhhhheeecccCCchhhHHHHHHHHHHHHHHHHHHHHHHHHhc-CCHHHhHHHHHHHHHHHHHHHHHHHhcchhhcCC
Confidence 4455666655211 3457888888888877777 8899999999 999999888777777666665554 1
Q ss_pred ----------------------hHHHHHHHHHHHhhcccchhh-hhheeeEeeecCcchhhHHhHHHHHHHHHHHHHHHH
Q 041759 168 ----------------------NLWIYSLLRFFSGISRATIGT-CTIVLLTEKVGTEWRGLVGILDSFFFTIGTLTLPAI 224 (525)
Q Consensus 168 ----------------------~~~~l~~~r~l~G~~~~~~~~-~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~l~~~l 224 (525)
+.|...+..+...+-...... ....+..|.++.++-.|..+++..+.++|.++++.+
T Consensus 105 ~~~~~~~~~~~~~~~~~~i~~~~~W~~~~FYv~~elw~~~vvS~lFW~fandi~t~~qakRfy~l~~~ganlg~i~sg~~ 184 (472)
T TIGR00769 105 TALADKLLSLLPPGFMGFIAILRIWSFALFYVMAELWGSVVLSLLFWGFANQITTIDEAKRFYALFGLGANVALIFSGRT 184 (472)
T ss_pred cHHHHHHHhhcchhhHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 133444445555555555554 677889999999999999999999999999999877
Q ss_pred -HHhc--------cCCchH----HHHHHHHHHHHHHHhHhheeecCCchHhhhcCCHHHHHHHHHhhCCCcCCccchhhh
Q 041759 225 -AYTN--------RSSSWT----IIYLWTSIPTLVYSGLLYIFVSESPRWLFMQGRQEEAVEVIKSLSPIKDSNQLSLSL 291 (525)
Q Consensus 225 -~~~~--------~~~~wr----~~f~~~~~~~~~~~~~~~~~lpesp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 291 (525)
.++. ....|. ..+.+.++..++.. .+..++.+.. . .++...+.+
T Consensus 185 ~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~~~~~~~~-~~~~~l~~~~-----~----------------~~~~~~~~~- 241 (472)
T TIGR00769 185 IKYFSKLRASLGPGVDGWHVSLKNLMVIVICSGLAII-LLYWWVNRNV-----L----------------TDPRSYNPA- 241 (472)
T ss_pred HHHHHHhhhccccccChHHHHHHHHHHHHHHHHHHHH-HHHHHHHhcc-----c----------------CCccccchh-
Confidence 4433 112342 23344444444333 3332221100 0 000000000
Q ss_pred hhhccCCCCcccccccccchhhhhhhhcchhHHHHHHHHHHHHHHHHHHHhhhhhcccccCChhHHHHHHHHHhcccccc
Q 041759 292 VSAVSFGHEPAASSKESSFLSSIRELFVRRWALERTLALMVPGFGIGVVYYGMTLGIENLGFDIYLGVVFNALLEIPNLA 371 (525)
Q Consensus 292 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 371 (525)
++.++++++.+...+++.++++|.++...+...+.....+..++..--...+...++..-....+-......+
T Consensus 242 -------~~~~k~k~k~~~~es~k~i~~S~yL~~ia~~vi~y~~~~nlve~~~k~~v~~~~p~~~~~~~f~g~~~~~~gi 314 (472)
T TIGR00769 242 -------LKEKKVKPKMSTMESLKFLVSSPYILDLALLVIAYGISINLVEVTWKSKLKAQYPSPNEYSAFMGDFSTWTGV 314 (472)
T ss_pred -------hccccCCCCCCHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHH
Confidence 0001111123334678889999987766666666666666555443322323222222211111111111111
Q ss_pred cCchhHHHHHHHHHhhcChhHHHHHHHHHHH
Q 041759 372 STIPSFFLTFFLIQKWNRKSSLLVLFIISGI 402 (525)
Q Consensus 372 ~~~~~~~~~~~l~d~~g~~~~~~~~~~~~~~ 402 (525)
..++..++.+++.+|+|-+....+.-++..+
T Consensus 315 ~tl~~~l~~~~l~~~~Gw~~~a~i~Pii~li 345 (472)
T TIGR00769 315 VSVTMMLLSGNVIRKYGWLTAALITPLVMLL 345 (472)
T ss_pred HHHHHHHHHHHHHHHhhHHHHHHHHHHHHHH
Confidence 3335566668999999987666554444433
No 223
>PRK06814 acylglycerophosphoethanolamine acyltransferase; Provisional
Probab=98.82 E-value=2e-08 Score=113.19 Aligned_cols=142 Identities=13% Similarity=0.028 Sum_probs=115.2
Q ss_pred eeeccccccchhhhhhhHHHHHHHHHHHhHHhhHhcccccCCchHHHHHHHHHHHHHHHHHHhh----------------
Q 041759 103 IISEWGLECSSAFIKGLPAASHFTGCLLGIVFLATLADSSLGRKNLLFLSCLTMSVATSLTIFS---------------- 166 (525)
Q Consensus 103 i~~~~~~~~~s~~~~g~~~s~~~lg~~~~~~~~G~l~dr~~Grk~~~~~~~~~~~i~~~~~~~~---------------- 166 (525)
+++.+|. +..+.|++.+.+.+|.++++++.|+++|+ .++++.+..+.++.+++.+..++.
T Consensus 252 ~~~~~g~---~~~~~g~~~~~~~~g~~ig~~~~g~l~~~-~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~ 327 (1140)
T PRK06814 252 AKETLGG---DENVATLFLAVFSVGVAVGSFLASKLSEG-RITLLYVPIGALLMGLFGLDLAFASSSVPAEPAQLKSILV 327 (1140)
T ss_pred HHHHcCC---chHHHHHHHHHHHHHHHHHHHHHHHHhCC-ceeeeeehHHHHHHHHHHHHHHhcccccccccccccchhh
Confidence 3455788 89999999999999999999999999998 887777766666666655544443
Q ss_pred ----hhHHHHHHHHHHHhhcccchhhhhheeeEeeecCcchhhHHhHHHHHHHHHHHHHHHHHHhc--cCCchHHHHHHH
Q 041759 167 ----NNLWIYSLLRFFSGISRATIGTCTIVLLTEKVGTEWRGLVGILDSFFFTIGTLTLPAIAYTN--RSSSWTIIYLWT 240 (525)
Q Consensus 167 ----~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~l~~~l~~~~--~~~~wr~~f~~~ 240 (525)
++.+.+++..++.|++.+...+...+++.+.+|++.||++++..++...+|..+++++...+ ...++...+++.
T Consensus 328 ~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~~~G~v~g~~~~~~~~~~~ig~~~~g~l~~~~~~~~~~~~~~ 407 (1140)
T PRK06814 328 FLSKRHGWRILIDLFGLAAAGGLYIVPLFAALQAWANPAHRARVIAANNVLNAAFMVAGTIILALLQALGFSIPWIILFI 407 (1140)
T ss_pred hhcccccHHHHHHHHHHHHHHHHhHHHHHHHHHhhCCcccceeeeHHHHHHHHHHHHHHHHHHHHHHHhccCHHHHHHHH
Confidence 67788889999999999999999999999999999999999999999999999999884433 245677777665
Q ss_pred HHHHHHHH
Q 041759 241 SIPTLVYS 248 (525)
Q Consensus 241 ~~~~~~~~ 248 (525)
++..++..
T Consensus 408 ~~~~~~~~ 415 (1140)
T PRK06814 408 ALANLIVA 415 (1140)
T ss_pred HHHHHHHH
Confidence 55444433
No 224
>PTZ00207 hypothetical protein; Provisional
Probab=98.81 E-value=1.7e-07 Score=95.12 Aligned_cols=148 Identities=7% Similarity=0.003 Sum_probs=104.3
Q ss_pred hhcccccCChhHHHHHHHHHhcccccccCchhHHHHHHHHHhhcChhHHHHHHHHHHHHHHHHHHhccc-cccchhHHHH
Q 041759 345 TLGIENLGFDIYLGVVFNALLEIPNLASTIPSFFLTFFLIQKWNRKSSLLVLFIISGICSIMAVVANDI-SNAGKRMRIG 423 (525)
Q Consensus 345 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~d~~g~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~ 423 (525)
+.+.+++|.+..+.+.+.++... .+ .+.++.|++.||+|+|+++.++.++..++.++..+.... ...+.+.+.+
T Consensus 51 ~~L~~~lgls~~~l~~i~svg~~----~g-~~~lp~G~L~Dr~G~R~vllig~ll~~iG~ll~ala~~~~i~~s~~~l~l 125 (591)
T PTZ00207 51 GAMQARYNLTQRDLSTITTVGIA----VG-YFLLPYSFIYDYLGPRPIFVLSMTVFCLGTLLFALTFQEVIEGSVVRLSV 125 (591)
T ss_pred HHHHHHhCcCHHHHHHHHHHHHH----HH-HHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHHhcccccCcHHHHHH
Confidence 55566788887776666554322 11 355578999999999999999999999999888775221 0012345566
Q ss_pred HHHHHHHHHHHHHHHHHhhhccccCcchhhhhhHHHHHHHHHHHHH-HHHHHhhccCchhHHHHHHHHHHHHHHHH
Q 041759 424 LELASLFSAYIAYTVIFIYAIELFPTCVRNSATSIMRLAIIFAAIF-SSVLVAAGSNNEFVSYGVFGLVIICCGFF 498 (525)
Q Consensus 424 ~~~~~~~~~~~~~~~~~~~~~~~~p~~~r~~~~~~~~~~~~~g~~~-~p~i~~~~~~~~~~~~~~~~~~~~~~~~~ 498 (525)
..++.+++.+..++.....+.+.+| ++||.+.|+......+|+.+ +|+..++...+....+++.+++.++..++
T Consensus 126 ~r~l~G~G~~~~~~~~~~~i~~~Fp-~~RG~a~Gi~~~~~gLGsaI~~~l~~~l~~~~~~~~fl~l~vl~~vv~ll 200 (591)
T PTZ00207 126 YNGLMTLGCMLFDLGAVVTVLSVFP-SNRGAVVAIMKTFTGLGSAILGSIQLAFFSDNTSAYFFFLMSFALVVGIL 200 (591)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhCh-hhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHH
Confidence 6777778777777777778888887 67899999999999999874 55555543334556666666666555443
No 225
>PF03825 Nuc_H_symport: Nucleoside H+ symporter
Probab=98.80 E-value=1e-07 Score=93.22 Aligned_cols=152 Identities=18% Similarity=0.194 Sum_probs=121.3
Q ss_pred eeeccc-cccchhhhhhhHHHHHHHHHHHhHHhhHhcccccCCchHHHHHHHHHHHHHHHHHHhh-hhHHHHHH----HH
Q 041759 103 IISEWG-LECSSAFIKGLPAASHFTGCLLGIVFLATLADSSLGRKNLLFLSCLTMSVATSLTIFS-NNLWIYSL----LR 176 (525)
Q Consensus 103 i~~~~~-~~~~s~~~~g~~~s~~~lg~~~~~~~~G~l~dr~~Grk~~~~~~~~~~~i~~~~~~~~-~~~~~l~~----~r 176 (525)
.-+|.| . +....+.+.++..++-...-...+++..| +|.|+++.++.+.+++=..+.+.. ++.+...+ ..
T Consensus 233 yl~~~gg~---~~~~~g~~~~l~~~aEi~~f~~~~~~~~r-~g~~~ll~~a~~~~~vR~~l~a~~~~~~~~~~~~~~l~q 308 (400)
T PF03825_consen 233 YLQELGGY---SGSTIGILWALGVVAEIPFFFFSGRFLKR-FGIKWLLLLALVAYAVRWLLYAYFSDPWPFIVALQLLGQ 308 (400)
T ss_pred HHHHcccc---hhhHHHHHHHHHHHHHHHHHHHHHHHHHh-cCHHHHHHHHHHHHHHHHHHHHHhcCCcHHHHHHHHHHH
Confidence 345555 6 66777888888888888888999999999 999999999999999998888887 55444333 34
Q ss_pred HHHhhcccchhhhhheeeEeeecCcchhhHHhHHHH-HHHHHHHHHHHH-HHhccC------CchHHHHHHHHHHHHHHH
Q 041759 177 FFSGISRATIGTCTIVLLTEKVGTEWRGLVGILDSF-FFTIGTLTLPAI-AYTNRS------SSWTIIYLWTSIPTLVYS 248 (525)
Q Consensus 177 ~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~-~~~~G~~l~~~l-~~~~~~------~~wr~~f~~~~~~~~~~~ 248 (525)
.++|+..+..+.....|+.+..|++.|+++.+++.. ..++|.++|..+ |++.+. +.|...+.+.+++.++..
T Consensus 309 ~lhG~tf~~~~~a~~~yi~~~~p~~~~at~Q~l~~~~~~Glg~~iG~~igG~l~~~~g~~~~~~~~~~~~v~a~~~~~~~ 388 (400)
T PF03825_consen 309 LLHGLTFGLFHAASVRYIDRIAPPELRATAQGLYSALSFGLGGAIGSLIGGWLYDAFGARGMFDWSAVFLVFAVMALVIL 388 (400)
T ss_pred hhhhHHHHHHHHHHHHHHHHhCCccchHHHHHHHHHHHhhHHHHHHHHHHHHHHHHhcchhhhhHHHHHHHHHHHHHHHH
Confidence 579999999999999999999999999999998876 468999999988 444443 346667777888777777
Q ss_pred hHhheeecCC
Q 041759 249 GLLYIFVSES 258 (525)
Q Consensus 249 ~~~~~~lpes 258 (525)
++.+++.+|+
T Consensus 389 ~~f~~~fk~~ 398 (400)
T PF03825_consen 389 VLFVILFKPK 398 (400)
T ss_pred HHHHhhccCC
Confidence 6666666653
No 226
>KOG3810 consensus Micronutrient transporters (folate transporter family) [Coenzyme transport and metabolism]
Probab=98.80 E-value=4.6e-08 Score=88.92 Aligned_cols=358 Identities=14% Similarity=0.085 Sum_probs=208.7
Q ss_pred HHHHHHHHHHHhHHhhHhcccccCCchHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHhhcccchhhhhheeeEeeec
Q 041759 120 PAASHFTGCLLGIVFLATLADSSLGRKNLLFLSCLTMSVATSLTIFSNNLWIYSLLRFFSGISRATIGTCTIVLLTEKVG 199 (525)
Q Consensus 120 ~~s~~~lg~~~~~~~~G~l~dr~~Grk~~~~~~~~~~~i~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~ 199 (525)
+.-+..-.+++.-++.=.+.|. .-.|+++++-.+...+...+..+.++.+.+=+.-+..|...+ ....-++|+-+..+
T Consensus 47 vyPvwTYSYLv~LvpvFlLTD~-lrYKPvivlq~ls~v~~w~~lv~g~sV~~mQvlE~FyG~~tA-aEIAYysYIYs~Vd 124 (433)
T KOG3810|consen 47 VYPVWTYSYLVGLVPVFLLTDY-LRYKPVVVLQALSGVPVWIMLVFGPSVKAMQVLEFFYGPATA-AEIAYYSYIYSKVD 124 (433)
T ss_pred cccchhHHHHHHHHHHHHHhhh-hhcceeeeeeccchhHHHHHHHhcCCchheeeehhhcChHHH-HHHhhhheeeeecC
Confidence 3344445566666777788998 888999998888888888888999999999999999999887 56778899999999
Q ss_pred CcchhhHHhHHHHHHHHHHHHHHHHHHhcc---CCchHHHHHHHHHHHHHHHhHhheeecCCchHhhhcCCHHHHHHHHH
Q 041759 200 TEWRGLVGILDSFFFTIGTLTLPAIAYTNR---SSSWTIIYLWTSIPTLVYSGLLYIFVSESPRWLFMQGRQEEAVEVIK 276 (525)
Q Consensus 200 ~~~r~~~~~~~~~~~~~G~~l~~~l~~~~~---~~~wr~~f~~~~~~~~~~~~~~~~~lpesp~~~~~~~~~~~~~~~~~ 276 (525)
++++.++.+...++.-.|-.+|..++-++. ..+++.+-.+......+.. ...+++|..++.+..+.++++. ...
T Consensus 125 ~~~Yqrvt~y~RaA~L~g~~~g~vlaQlLvs~~~~sy~~LN~ISL~~~~ia~-~~A~fLP~v~rSl~f~~~~~~~--~v~ 201 (433)
T KOG3810|consen 125 PEMYKRVTGYCRAAFLVGKFVGSVLAQLLVSLETLSYTTLNYISLAEVTIAV-LLALFLPRVKRSLYFHRLEDKI--SVG 201 (433)
T ss_pred HHHHHHHHHHhHHHHHHHhHHHhHHHHHHhhhcccchhhhchhhHHHHHHHH-HHHhhCCCCchhhhhhcccccc--eec
Confidence 999999999999998888888888866543 3345555555544444444 6667787765433222222210 000
Q ss_pred hhCCCcCCccchhhhhhhccCCCCcc-cccccccchhhhhhhhcchhHHHHHHHHHHHHHHHHHHHhhhhhcccccCCh-
Q 041759 277 SLSPIKDSNQLSLSLVSAVSFGHEPA-ASSKESSFLSSIRELFVRRWALERTLALMVPGFGIGVVYYGMTLGIENLGFD- 354 (525)
Q Consensus 277 ~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~- 354 (525)
+. ++...+.+..+ .+..-......+.+..++|..+...+-..+...+...+.++...+-++..-+
T Consensus 202 ~~-------------e~~~~~~~~~~~l~~~~~~l~~~l~~~y~np~ll~WSlWwAl~scg~~QV~nY~Q~LW~~~~~~~ 268 (433)
T KOG3810|consen 202 DL-------------EEMNPQASYMSYLRGAFVLLWRDLQECYSNPRLLKWSLWWALASCGYYQVTNYTQILWKEVAPNP 268 (433)
T ss_pred cc-------------hhcCccchhhHHHHHHHHHHHHHHHHHhcCchhhhhHHHHHHhhchhHHHHHHHHHHHHhhCCCc
Confidence 00 00000000000 0000001123455667788766555544444444443333333333332111
Q ss_pred -hHHHHHHHHHhcccccccCchhHHHHHHHHHhhcChhHHHHHHHHHHHHHHHHHHhccccccchhHHHHHHHHHHHHHH
Q 041759 355 -IYLGVVFNALLEIPNLASTIPSFFLTFFLIQKWNRKSSLLVLFIISGICSIMAVVANDISNAGKRMRIGLELASLFSAY 433 (525)
Q Consensus 355 -~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~d~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 433 (525)
...++..-++..+ .++++.+..|.+--.+.|+.-++++......+.+++...... +.++.++..+++.....
T Consensus 269 ~~vyNG~veAv~tl----LGa~~~~~~g~l~i~w~r~g~~ll~~~s~~~agllf~m~~t~---~Iw~~Ya~yvlfr~~y~ 341 (433)
T KOG3810|consen 269 ANVYNGAVEAVSTL----LGAIAALAAGYLNINWNRWGDLLLAVGSAVQAGLLFIMAQTQ---HIWVCYAGYVLFRVIYQ 341 (433)
T ss_pred hhhhcCHHHHHHHH----HHHHHHHHHHheeeccchhhHHHHHHHHHHhhhhhhhhhccc---ceehhhhhHHHHHhhHh
Confidence 1112222222222 444777888887766666543333333222222222222222 24577777778777777
Q ss_pred HHHHHHHhhhccccCcchhhhhhHHHHHHHHHHHHHHHHHH----hhc------cCchhHHHHHHHHHHHHHHHHHHhc
Q 041759 434 IAYTVIFIYAIELFPTCVRNSATSIMRLAIIFAAIFSSVLV----AAG------SNNEFVSYGVFGLVIICCGFFVICL 502 (525)
Q Consensus 434 ~~~~~~~~~~~~~~p~~~r~~~~~~~~~~~~~g~~~~p~i~----~~~------~~~~~~~~~~~~~~~~~~~~~~~~~ 502 (525)
...++....+++....+.-|..+|++.++.-+-..+-.++. |.. ..-+...|.+++++.++...+....
T Consensus 342 l~itiA~~~iA~nL~~e~~gLvFGiNTFvAl~lQsilT~iVvd~~g~~L~ir~Q~~~Y~~Yf~v~~~i~~~~~~~~~~~ 420 (433)
T KOG3810|consen 342 LTITIATFQIARNLSSELFGLVFGINTFVALILQSILTLIVVDDRGLGLDIRTQFVVYSSYFIVLGVIFLIGFGIEYLM 420 (433)
T ss_pred hhhhHHHHHHHHhhhhhhheeeeehHHHHHHHHHHhheEEEEcccccCCCcceeEEEEeehHHHHHHHHHHHHHHHHHH
Confidence 77777777777777777788889988876654444333332 110 0124456777787777776554433
No 227
>TIGR00901 2A0125 AmpG-related permease.
Probab=98.79 E-value=2.4e-07 Score=90.31 Aligned_cols=159 Identities=11% Similarity=0.026 Sum_probs=108.3
Q ss_pred HHHhhhhhcccccCChhHHHHHHHHHhcccccccCchhHHHHHHHHHhh-----cChhHH-HHHHHHHHHHHHHHHHhcc
Q 041759 339 VVYYGMTLGIENLGFDIYLGVVFNALLEIPNLASTIPSFFLTFFLIQKW-----NRKSSL-LVLFIISGICSIMAVVAND 412 (525)
Q Consensus 339 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~d~~-----g~~~~~-~~~~~~~~~~~~~~~~~~~ 412 (525)
......|.+.++.|.+..+.+..... .+ ...+ .++.|+++||+ |||+.+ ..+.++.++....+.+...
T Consensus 6 ~~~~~~~~~~~~~g~s~~~~g~~~~~-~~----~~~~-~~~~g~~~Dr~~~~~~Grr~~~l~~~~~~~~~~~~~l~~~~~ 79 (356)
T TIGR00901 6 LVGNTLPYWLRSKNVSLKTIGFFSLV-GL----PYSL-KFLWSPLVDTVYLPFFGRRRSWLVLTQVLLLSLLLILSFLVP 79 (356)
T ss_pred hHHhHHHHHHHHcCCCHHHHHHHHHH-HH----HHHH-HHHHHHHHhcccCCCCCccHHHHHHHHHHHHHHHHHHHcCCc
Confidence 34455678888899998887777533 22 1113 78999999998 788864 5666666666555555433
Q ss_pred ccccchhHHHHHHHHHHHHHHHHHHHHHhhhccccCcchhhhhhHHHHHHHHHHHHHHHHHHhh--ccCc--------hh
Q 041759 413 ISNAGKRMRIGLELASLFSAYIAYTVIFIYAIELFPTCVRNSATSIMRLAIIFAAIFSSVLVAA--GSNN--------EF 482 (525)
Q Consensus 413 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~r~~~~~~~~~~~~~g~~~~p~i~~~--~~~~--------~~ 482 (525)
. .+........++.+++.....+...+++.|.+|+++|+.+.++......+|.+++|.+.+. ...+ +.
T Consensus 80 ~--~~l~~l~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~r~~~~~~~~~~~~~G~~~~~~l~~~l~~~~g~~~~~~~~wr 157 (356)
T TIGR00901 80 S--TDLPLLAGLAFLIAFFSATQDIALDAWRLEILSDEELGYGSTIYIVGYRAGMLLSGSLALVLASPEFANTGLITLWG 157 (356)
T ss_pred c--hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHhhhchHHHHHHHHHHHHHHHHHHHHHHHhhhcccccccccccH
Confidence 2 1222344445555666666677888999999999999999999999999999999988863 1223 56
Q ss_pred HHHHHHHHHHHHHHHHHHh-ccCC
Q 041759 483 VSYGVFGLVIICCGFFVIC-LPET 505 (525)
Q Consensus 483 ~~~~~~~~~~~~~~~~~~~-~~~~ 505 (525)
..|.+.+++.++..+..++ .+|.
T Consensus 158 ~~f~i~ai~~l~~~~~~~~~~~e~ 181 (356)
T TIGR00901 158 YIFFWTALLILPGLLVTLFLAKEP 181 (356)
T ss_pred HHHHHHHHHHHHHHHHHHHhccCC
Confidence 6777777666655544443 4554
No 228
>KOG3764 consensus Vesicular amine transporter [Intracellular trafficking, secretion, and vesicular transport]
Probab=98.79 E-value=1.6e-08 Score=93.96 Aligned_cols=144 Identities=13% Similarity=0.045 Sum_probs=124.2
Q ss_pred CChhHHHHHHHHHhcccccccCchhHHHHHHHHHhhcChhHHHHHHHHHHHHHHHHHHhccccccchhHHHHHHHHHHHH
Q 041759 352 GFDIYLGVVFNALLEIPNLASTIPSFFLTFFLIQKWNRKSSLLVLFIISGICSIMAVVANDISNAGKRMRIGLELASLFS 431 (525)
Q Consensus 352 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~d~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 431 (525)
+......+.+.+...+ .+++..++.|.++||+|+|..+++|+.++..+.+++.+.... ...++.-.+.+.+
T Consensus 102 ~~e~~~iG~LFaskA~----~qllvnp~~G~l~~~iGy~ipm~~Gl~vmf~sTilFafg~sy-----~~l~vAR~LQgvg 172 (464)
T KOG3764|consen 102 DRENTQIGLLFASKAL----VQLLVNPFFGNLIDRIGYKIPMVAGLFVMFLSTILFAFGNSY-----PMLFVARSLQGVG 172 (464)
T ss_pred cccccchhHHHHHHHH----HHHHhcccchhhHHHhccccHHHHHHHHHHHHHHHHHHcchh-----HHHHHHHHHhhhh
Confidence 3445566777777766 677899999999999999999999999999999999887766 4778888999999
Q ss_pred HHHHHHHHHhhhccccCcch-hhhhhHHHHHHHHHHHHHHHHHHhh--ccCchhHHHHHHHHHHHHHHHHHHhccC
Q 041759 432 AYIAYTVIFIYAIELFPTCV-RNSATSIMRLAIIFAAIFSSVLVAA--GSNNEFVSYGVFGLVIICCGFFVICLPE 504 (525)
Q Consensus 432 ~~~~~~~~~~~~~~~~p~~~-r~~~~~~~~~~~~~g~~~~p~i~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 504 (525)
.........+++++.+|++. |++++|+.-.+..+|-+++|.+.|. ...|...+|.++++++++...+-+++-+
T Consensus 173 sA~~~tsglamlAd~f~~d~er~~vmGialgfislG~lvgPpfGGilYe~~Gk~aPFlVL~~v~Lld~~L~l~vi~ 248 (464)
T KOG3764|consen 173 SAFADTSGLAMLADVFPEDNERGSVMGIALGFISLGVLVGPPFGGILYEFAGKSAPFLVLAIVLLLDGALQLLVIE 248 (464)
T ss_pred HHHHHhhhHHHHHHHcccchhhhHHHHHHHHHHhccceecCCcccchHhhcCCcCcHHHHHHHHHHHHHHHHheeC
Confidence 99999999999999999875 6999999999999999999999994 5568899999999999998887766643
No 229
>COG0477 ProP Permeases of the major facilitator superfamily [Carbohydrate transport and metabolism / Amino acid transport and metabolism / Inorganic ion transport and metabolism / General function prediction only]
Probab=98.77 E-value=6.6e-08 Score=91.95 Aligned_cols=144 Identities=24% Similarity=0.336 Sum_probs=117.0
Q ss_pred ccceeeccccccchh--hhhhhHHHHHHHHHHHhHHhhHhcccccCCchHHHHHHHHHHHHHHHHHHhhhh--HHHHHHH
Q 041759 100 ALTIISEWGLECSSA--FIKGLPAASHFTGCLLGIVFLATLADSSLGRKNLLFLSCLTMSVATSLTIFSNN--LWIYSLL 175 (525)
Q Consensus 100 ~~~i~~~~~~~~~s~--~~~g~~~s~~~lg~~~~~~~~G~l~dr~~Grk~~~~~~~~~~~i~~~~~~~~~~--~~~l~~~ 175 (525)
.+.+..+++. +. ...++..+.+.++..+++++.|.++|| +|||+.+..+.....++.++.++..+ .+.+++.
T Consensus 25 ~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~-~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 100 (338)
T COG0477 25 LPLLLSTLSL---SSGRLLYGLLLSAFFLGYAIGSLLAGPLGDR-YGRRKVLIIGLLLFLLGTLLLALAPNVGLALLLIL 100 (338)
T ss_pred HHHHHHHcCC---CchhHHHHHHHHHHHHHHHHHhhhhhhcccc-ccchHHHHHHHHHHHHHHHHHHhCccchHHHHHHH
Confidence 5555566655 44 578999999999999999999999999 99999888888776777777777766 9999999
Q ss_pred HHHHhhcccchhhhhheeeEeeecC-cchhhHHhHHHH-HHHHHHHHHHHHHHhcc---CCchHHHHHHHHHHHHHH
Q 041759 176 RFFSGISRATIGTCTIVLLTEKVGT-EWRGLVGILDSF-FFTIGTLTLPAIAYTNR---SSSWTIIYLWTSIPTLVY 247 (525)
Q Consensus 176 r~l~G~~~~~~~~~~~~~i~~~~~~-~~r~~~~~~~~~-~~~~G~~l~~~l~~~~~---~~~wr~~f~~~~~~~~~~ 247 (525)
|+++|++.+...+...+++.|+.|+ ++|+...+.... ...+|.++++.++..+. ..+||+.|.+........
T Consensus 101 ~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 177 (338)
T COG0477 101 RLLQGLGGGGLLPVASALLSEWFPEATERGLAVGLVTLGAGALGLALGPLLAGLLLGALLWGWRAAFLLAALLGLLL 177 (338)
T ss_pred HHHHHhhhHHHHHHHHHHHHHhcCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcchHHHHHHHHHHHHHH
Confidence 9999999999999999999999987 678888888888 57888888886654433 358999776666655443
No 230
>COG2223 NarK Nitrate/nitrite transporter [Inorganic ion transport and metabolism]
Probab=98.77 E-value=1.8e-07 Score=88.23 Aligned_cols=148 Identities=11% Similarity=0.019 Sum_probs=108.4
Q ss_pred hhcccccCChhHHHHHHHHHhcccccccCchhHHHHHHHHHhhcChhHHHHHHHHHHHHHHHHHHhccccccchhHHHHH
Q 041759 345 TLGIENLGFDIYLGVVFNALLEIPNLASTIPSFFLTFFLIQKWNRKSSLLVLFIISGICSIMAVVANDISNAGKRMRIGL 424 (525)
Q Consensus 345 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~d~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 424 (525)
+.+-++++++..+..++.+...+ ...+.++..|.+.||+|.|++..++.++..+-.+.+.+....+ +.+..+++
T Consensus 38 ~~i~~~~~LS~~q~~ll~aiPil----~GallRl~~g~l~drfGgR~~~~~s~~l~~IP~~~~~~a~~~~--~~~~ll~~ 111 (417)
T COG2223 38 VFIKSDFGLSEGQKGLLVAIPIL----VGALLRLPYGFLTDRFGGRKWTILSMLLLLIPCLGLAFAVTYP--STWQLLVI 111 (417)
T ss_pred hhhccccCCCHHHHHHHHHHHHH----HhHHHHHHHHhhhcccCchHHHHHHHHHHHHHHHHHHHHccCC--chHHHHHH
Confidence 34447799999999999888777 7778999999999999999999999999999999888887662 12234444
Q ss_pred HHHHHHHHHHHHHHHHhhhccccCcchhhhhhHHHHHHHHHHHH----HHHHHHhhccC-chhHHHHHHHHHHHHHHHHH
Q 041759 425 ELASLFSAYIAYTVIFIYAIELFPTCVRNSATSIMRLAIIFAAI----FSSVLVAAGSN-NEFVSYGVFGLVIICCGFFV 499 (525)
Q Consensus 425 ~~~~~~~~~~~~~~~~~~~~~~~p~~~r~~~~~~~~~~~~~g~~----~~p~i~~~~~~-~~~~~~~~~~~~~~~~~~~~ 499 (525)
.++.+++ +..+.....++++.+|++++|.+.|+.. .+++|.. ++|.+...... .+.....++....++..+..
T Consensus 112 gll~G~~-GasFav~m~~~s~~fP~~~qG~AlGI~g-~GN~G~av~q~~~P~v~~~~g~~~w~~~~~i~~~~l~v~~v~~ 189 (417)
T COG2223 112 GLLLGLA-GASFAVGMPNASFFFPKEKQGLALGIAG-AGNLGVAVAQLVAPLVAVAFGFLAWRNVAGIYVVALAIAAVLA 189 (417)
T ss_pred HHHHhcc-cceehcccccccccCChhhhhHHHHHhc-cccccHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHH
Confidence 4444443 6667888899999999999999999998 7766654 56666653321 24444455555555544443
Q ss_pred H
Q 041759 500 I 500 (525)
Q Consensus 500 ~ 500 (525)
+
T Consensus 190 ~ 190 (417)
T COG2223 190 W 190 (417)
T ss_pred H
Confidence 3
No 231
>TIGR00896 CynX cyanate transporter. This family of proteins is involved in active transport of cyanate. The cyanate transporter in E.Coli is used to transport cyanate into the cell so it can be metabolized into ammonia and bicarbonate. This process is used to overcome the toxicity of environmental cyanate.
Probab=98.75 E-value=6.9e-08 Score=94.06 Aligned_cols=125 Identities=10% Similarity=0.071 Sum_probs=97.9
Q ss_pred ccceeeccccccchhhhhhhHHHHHHHHHHHhHHhhHhcccccC-CchHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHH
Q 041759 100 ALTIISEWGLECSSAFIKGLPAASHFTGCLLGIVFLATLADSSL-GRKNLLFLSCLTMSVATSLTIFSNNLWIYSLLRFF 178 (525)
Q Consensus 100 ~~~i~~~~~~~~~s~~~~g~~~s~~~lg~~~~~~~~G~l~dr~~-Grk~~~~~~~~~~~i~~~~~~~~~~~~~l~~~r~l 178 (525)
+|.+.++.|. +..+.+.+.+.+.++..++.++.|++.|| + +||+.+.++.++.+++.+...+.++..... .-++
T Consensus 220 lp~~~~~~g~---~~~~~g~~~~~~~~~~i~~~~~~g~l~dr-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~l 294 (355)
T TIGR00896 220 LPAILISHGA---SAATAGSLLALMQLAQAASALLIPALARR-VKDQRGIVAVLAVLQLVGLCGLLFAPMHGLWA-WALV 294 (355)
T ss_pred HHHHHHHcCC---CHHHHHHHHHHHHHHHHHHHHhHHHHHhh-hccchHHHHHHHHHHHHHHHHHHHhhhhHHHH-HHHH
Confidence 4455566788 88999999999999999999999999999 9 567777788888888877777665433322 4578
Q ss_pred HhhcccchhhhhheeeEeeec-CcchhhHHhHHHHHHHHHHHHHHHH-HHhcc
Q 041759 179 SGISRATIGTCTIVLLTEKVG-TEWRGLVGILDSFFFTIGTLTLPAI-AYTNR 229 (525)
Q Consensus 179 ~G~~~~~~~~~~~~~i~~~~~-~~~r~~~~~~~~~~~~~G~~l~~~l-~~~~~ 229 (525)
.|++.+...+...+.+.+..+ +++++...++.+....+|..++|.+ +.+.+
T Consensus 295 ~g~~~g~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~gp~~~G~l~~ 347 (355)
T TIGR00896 295 LGLGQGGAFPLALTLIGLRSRQAAQAAALSAMAQSIGYLLAALGPLFVGVLHD 347 (355)
T ss_pred HHHhhhhHhHHHHHHHHHhccCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 899999888887777665444 5667888898888888888999987 55554
No 232
>TIGR01301 GPH_sucrose GPH family sucrose/H+ symporter. This model represents sucrose/proton symporters, found in plants, from the Glycoside-Pentoside-Hexuronide (GPH)/cation symporter family. These proteins are predicted to have 12 transmembrane domains. Members may export sucrose (e.g. SUT1, SUT4) from green parts to the phloem for long-distance transport or import sucrose (e.g SUT2) to sucrose sinks such as the tap root of the carrot.
Probab=98.75 E-value=4.5e-07 Score=90.07 Aligned_cols=168 Identities=11% Similarity=0.069 Sum_probs=111.0
Q ss_pred HHHHHHHhhhhhcccccCChhHHHHHHHHHhcccccccCchhHHHHHHHHH----hhcChhHHHHH-HHHHHHHHHHHHH
Q 041759 335 FGIGVVYYGMTLGIENLGFDIYLGVVFNALLEIPNLASTIPSFFLTFFLIQ----KWNRKSSLLVL-FIISGICSIMAVV 409 (525)
Q Consensus 335 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~d----~~g~~~~~~~~-~~~~~~~~~~~~~ 409 (525)
++.......++.+++++|.+......+.....+ ..++..++.|+++| |+|||+.+++. .....++++++.+
T Consensus 18 ~~~~l~~~~l~~yl~~lg~~~~~~~~i~~~~~l----~~~i~~Pi~G~lSDr~~sr~GRRrp~il~g~~~~~~~l~ll~~ 93 (477)
T TIGR01301 18 FGWALQLSLLTPYVQELGIPHAWASIIWLCGPL----SGLLVQPLVGYLSDRCTSRFGRRRPFIAAGAALVAFAVILIGF 93 (477)
T ss_pred HHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHH----HHHHHHhHeeehhcCCCCCCCChHHHHHHHHHHHHHHHHHHHh
Confidence 344444444566778899998888888777776 77788999999999 59999988775 5555555555555
Q ss_pred hcccc--------cc--ch--hHHHHHHHHHHHHHHHHHHHHHhhhccccCcchh--hhhhHHHHHHHHHHHHHHHHHHh
Q 041759 410 ANDIS--------NA--GK--RMRIGLELASLFSAYIAYTVIFIYAIELFPTCVR--NSATSIMRLAIIFAAIFSSVLVA 475 (525)
Q Consensus 410 ~~~~~--------~~--~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~r--~~~~~~~~~~~~~g~~~~p~i~~ 475 (525)
..... .. .+ ...++...+..++.....+...++++|..|+++| +.+.++.+....+|+++++.+.+
T Consensus 94 ~~~~~~~~~~~~~~~~~~~~i~~~~i~~~lld~~~n~~~~p~rALiaDl~p~~~~~~~~a~~~~~~~~~lG~ilg~~~g~ 173 (477)
T TIGR01301 94 AADIGHLFGDNLDKKTKPRAIIVFVVGFWILDVANNMLQGPCRAFLADLTGGDARRTRIANAYFSFFMAIGNVLGYAAGA 173 (477)
T ss_pred CchhhhhccccccccchhHHHHHHHHHHHHHHHHHHHHHHHHHHhcccccCchhHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 43210 00 01 1223333344556666777788999999998865 57888888888999999988876
Q ss_pred hcc-----------------CchhHHHHHHHHHHHHHHHHH-HhccCCC
Q 041759 476 AGS-----------------NNEFVSYGVFGLVIICCGFFV-ICLPETR 506 (525)
Q Consensus 476 ~~~-----------------~~~~~~~~~~~~~~~~~~~~~-~~~~~~~ 506 (525)
... .+....|.+.+++.+++.++. +..+|..
T Consensus 174 ~~~~~~~~~~~~~~~~~~~~~~~~~~F~i~a~~l~i~~l~t~~~v~E~~ 222 (477)
T TIGR01301 174 YSGLYKIFPFTKTEACGVSCANLKSCFLIDIILLAILTYIALSAVKENP 222 (477)
T ss_pred HHhHHHhcccccccccccccchHHHHHHHHHHHHHHHHHHHeeeeeccC
Confidence 421 033456666666665555443 4456643
No 233
>TIGR00926 2A1704 Peptide:H+ symporter (also transports b-lactam antibiotics, the antitumor agent, bestatin, and various protease inhibitors).
Probab=98.75 E-value=7.6e-07 Score=92.07 Aligned_cols=147 Identities=14% Similarity=0.135 Sum_probs=118.0
Q ss_pred ceeeccccccchhhhhhhHHHHHHHHHHHhHHhhHhcccccCCchHHHHHHHHHHHHHHHHHHhhh--------hHHHHH
Q 041759 102 TIISEWGLECSSAFIKGLPAASHFTGCLLGIVFLATLADSSLGRKNLLFLSCLTMSVATSLTIFSN--------NLWIYS 173 (525)
Q Consensus 102 ~i~~~~~~~~~s~~~~g~~~s~~~lg~~~~~~~~G~l~dr~~Grk~~~~~~~~~~~i~~~~~~~~~--------~~~~l~ 173 (525)
.+.+.+|. +......+...+....-+..+++|+++|+++||++.+.++.++..+|.++.+++. .....+
T Consensus 13 Yl~~~lg~---~~~~A~~i~~~f~~l~yl~pilGg~iAD~~lG~~~tIl~~~ii~~lG~~llai~a~~~~~~~~~~~~~l 89 (654)
T TIGR00926 13 YFLNFLGF---SESTSTVLFHTFTYLCYLTPLIGAIIADGWLGKFKTILYLSIVYVVGHALLSFGAIPSSGHPLHDLLDL 89 (654)
T ss_pred HHHHHcCC---cHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHhccCcccccchHHHHHH
Confidence 44556788 8888888888888888888899999999989999999999999999998887642 123466
Q ss_pred HHHHHHhhcccchhhhhheeeEeeecCc---chhhHHhHHHHHHHHHHHHHHHH-HHhcc-------CCchHHHHHHHHH
Q 041759 174 LLRFFSGISRATIGTCTIVLLTEKVGTE---WRGLVGILDSFFFTIGTLTLPAI-AYTNR-------SSSWTIIYLWTSI 242 (525)
Q Consensus 174 ~~r~l~G~~~~~~~~~~~~~i~~~~~~~---~r~~~~~~~~~~~~~G~~l~~~l-~~~~~-------~~~wr~~f~~~~~ 242 (525)
++-.+..+|.|++-+...+...|-++++ +|...+.++..+.++|.++++.+ .++-. ..+|...|.+.++
T Consensus 90 ~gLaLia~G~GgiKp~vsaf~gdqf~~~~~~~~~s~F~~fY~~iNiGSlis~~i~~~l~~~~~~fg~~~~~~~aF~i~~i 169 (654)
T TIGR00926 90 LGLALIALGTGGIKPCVSAFGGDQFEERQLSLRSRFFSFFYFAINAGSLISTIITPILRGDVGCFGCQDCYPLAFGVPAI 169 (654)
T ss_pred HHHHHHHhhccccccCchhhhHhhcCccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcccccCcchHHHHHHHHH
Confidence 7888899999999999999999988754 36677888899999999998877 44432 2369999999988
Q ss_pred HHHHHHhHh
Q 041759 243 PTLVYSGLL 251 (525)
Q Consensus 243 ~~~~~~~~~ 251 (525)
..++.+++.
T Consensus 170 ~m~ia~lvf 178 (654)
T TIGR00926 170 LMILALIVF 178 (654)
T ss_pred HHHHHHHHH
Confidence 888777443
No 234
>KOG0255 consensus Synaptic vesicle transporter SVOP and related transporters (major facilitator superfamily) [General function prediction only]
Probab=98.75 E-value=6.7e-08 Score=99.32 Aligned_cols=146 Identities=16% Similarity=0.063 Sum_probs=118.2
Q ss_pred cCChhHHHHHHHHHhcccccccCchhHHHHHHHHHhhcChhHHHHHHHHHHHHHHHHHHhccccccchhHHHHHHHHHHH
Q 041759 351 LGFDIYLGVVFNALLEIPNLASTIPSFFLTFFLIQKWNRKSSLLVLFIISGICSIMAVVANDISNAGKRMRIGLELASLF 430 (525)
Q Consensus 351 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~d~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 430 (525)
...+........++..+ |.++|.++.|.++||+|||+++.++.++..++.+...+..+. ....++-++.|+
T Consensus 113 ~c~~~~~~~~~~s~~~~----G~~vG~~i~g~lsD~~GRk~~~~~~~~~~~i~~~~~a~a~~~-----~~~~~~Rfl~G~ 183 (521)
T KOG0255|consen 113 VCDSSTLVALGQSLFFL----GVLVGSLIFGPLSDRFGRKPVLLVSLLLFIIFGILTAFAPNY-----WMFLIFRFLSGF 183 (521)
T ss_pred eeCcHhHHHHHHHHHHH----HHHHHHhhheehHhhcccHHHHHHHHHHHHHHHHHHHHhCcH-----HHHHHHHHHHHh
Confidence 34455555566666666 777999999999999999999999999999999887777665 578889999999
Q ss_pred HHHHHHHHHHhhhccccCcchhhhhhHHHHHHHHHHHHHHHHHHhhccCchhHHHHHHHHHHHHHHHHHHhccCCC
Q 041759 431 SAYIAYTVIFIYAIELFPTCVRNSATSIMRLAIIFAAIFSSVLVAAGSNNEFVSYGVFGLVIICCGFFVICLPETR 506 (525)
Q Consensus 431 ~~~~~~~~~~~~~~~~~p~~~r~~~~~~~~~~~~~g~~~~p~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 506 (525)
+.+........+..|.++++.|+.+..+ ......++.++|.+.++...++.+.+++..+..++..++.++.+|.+
T Consensus 184 ~~~~~~~~~~~~~~E~~~~~~R~~~~~~-~~~~~~~~~~~~~~~a~~~~~Wr~~~~~~~~~~~~~~~~~~l~~Es~ 258 (521)
T KOG0255|consen 184 FGSGPLTVGFGLVAEIVSPKQRGLALTL-GGFFFVGGLMLPAGAAYITRDWRWLFWIISIPSGLFLLLWFLPPESP 258 (521)
T ss_pred hccchhHHhHhhheeecCcchhhHHHHH-HHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHccCcCh
Confidence 9999999999999999999999999999 77788888888888876555677777777776666655545454643
No 235
>PRK09669 putative symporter YagG; Provisional
Probab=98.71 E-value=5.9e-07 Score=90.36 Aligned_cols=112 Identities=15% Similarity=0.250 Sum_probs=87.6
Q ss_pred hhhhHHHHHHHHHHHhHHhhHhcccccCCchHHHHHHHHHHHHHHHHHHh--hhhHHHHHHHHHHHhhcccchhhhhhee
Q 041759 116 IKGLPAASHFTGCLLGIVFLATLADSSLGRKNLLFLSCLTMSVATSLTIF--SNNLWIYSLLRFFSGISRATIGTCTIVL 193 (525)
Q Consensus 116 ~~g~~~s~~~lg~~~~~~~~G~l~dr~~Grk~~~~~~~~~~~i~~~~~~~--~~~~~~l~~~r~l~G~~~~~~~~~~~~~ 193 (525)
..+.+.....++..++.+++++++|| +|+|+.+..+.++.++..+...+ .++.+.+++..++.|++.+...+...++
T Consensus 265 ~~~~~~~~~~i~~ii~~~~~~~l~~r-~gk~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~am 343 (444)
T PRK09669 265 LATLFLVTGMIAGLFGALLSERLLGK-FDRVRAFKWTIVAFVILSALIFFIPPSNVWLIFALNILFNFIQNLTTPLQWSM 343 (444)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHH-hChHHHHHHHHHHHHHHHHHHHHhCcchHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 44556667778888999999999999 99999999888776654443333 3577778888899999999999999999
Q ss_pred eEeeec-------CcchhhHHhHHHHHHHHHHHHHHHH-HHhc
Q 041759 194 LTEKVG-------TEWRGLVGILDSFFFTIGTLTLPAI-AYTN 228 (525)
Q Consensus 194 i~~~~~-------~~~r~~~~~~~~~~~~~G~~l~~~l-~~~~ 228 (525)
++|..+ ++..|...+..+....+|..+|+.+ +.++
T Consensus 344 ~ad~~d~~e~~~G~r~~g~~~s~~~~~~klg~alg~~i~g~ll 386 (444)
T PRK09669 344 FSDVVDYEEKRSGRRLDGLVFSTNLFAIKLGLAIGGAVVGWIL 386 (444)
T ss_pred HHhhhhhhhhhcCcCcchHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 998875 2334667888888889999998877 4444
No 236
>KOG2532 consensus Permease of the major facilitator superfamily [Carbohydrate transport and metabolism]
Probab=98.69 E-value=3.7e-07 Score=90.56 Aligned_cols=146 Identities=13% Similarity=0.106 Sum_probs=125.4
Q ss_pred ccCChhHHHHHHHHHhcccccccCchhHHHHHHHHHhhcChhHHHHHHHHHHHHHHHHHHhccccccchhHHHHHHHHHH
Q 041759 350 NLGFDIYLGVVFNALLEIPNLASTIPSFFLTFFLIQKWNRKSSLLVLFIISGICSIMAVVANDISNAGKRMRIGLELASL 429 (525)
Q Consensus 350 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~d~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 429 (525)
++.++..+.+.+.+.... |.+++.+.++++.||+|-|+++..+.++.+++.++..+.... +....+++-++.|
T Consensus 67 ~~~ws~~~k~~i~ss~~~----G~i~~~iP~g~l~~k~G~r~v~~~~~~~sa~~t~l~P~aa~~---~~~~~~~~R~lqG 139 (466)
T KOG2532|consen 67 EYDWSSTEKGLIFSSFFW----GYILGQIPGGYLADKFGARRVFFISGLISALLTLLTPLAASI---GFYLLLVLRFLQG 139 (466)
T ss_pred eecCCHHHHHHHHHHHHH----HHHHHHcCcHHHHHHcCchHHHHHHHHHHHHHHHHHHHHHHh---cchhhHHHHHHhH
Confidence 456778888888888888 888999999999999999999999999999999999988765 2336688889999
Q ss_pred HHHHHHHHHHHhhhccccCcchhhhhhHHHHHHHHHHHHHHHHHHhh--c-cCchhHHHHHHHHHHHHHHHHHHhc
Q 041759 430 FSAYIAYTVIFIYAIELFPTCVRNSATSIMRLAIIFAAIFSSVLVAA--G-SNNEFVSYGVFGLVIICCGFFVICL 502 (525)
Q Consensus 430 ~~~~~~~~~~~~~~~~~~p~~~r~~~~~~~~~~~~~g~~~~p~i~~~--~-~~~~~~~~~~~~~~~~~~~~~~~~~ 502 (525)
++.+..+|....+...-.|++.|++..++......+|.+++-.+.|. . ..|+...|++.+++.++..++++++
T Consensus 140 l~~g~~~pa~~~i~~~W~P~~Ers~~~ail~~g~q~g~v~~mp~sg~lc~s~~GW~sifY~~g~~g~i~~~~w~~~ 215 (466)
T KOG2532|consen 140 LGQGVLFPAIGSILAKWAPPNERSTFIAILTAGSQLGTIITMPVSGLLCESSLGWPSIFYVFGIVGLIWFILWFLF 215 (466)
T ss_pred HHHhHHHhhhhceeeeECCHHHHHHHHHHHHHHHHHHHHHHHHhHHHHhccCCCCchHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999887777764 2 3678899999998888777665444
No 237
>PF13347 MFS_2: MFS/sugar transport protein
Probab=98.69 E-value=2.2e-07 Score=92.92 Aligned_cols=114 Identities=18% Similarity=0.302 Sum_probs=101.2
Q ss_pred hhhhhhHHHHHHHHHHHhHHhhHhcccccCCchHHHHHHHHHHHHHHHHHHhhh--hHHHHHHHHHHHhhcccchhhhhh
Q 041759 114 AFIKGLPAASHFTGCLLGIVFLATLADSSLGRKNLLFLSCLTMSVATSLTIFSN--NLWIYSLLRFFSGISRATIGTCTI 191 (525)
Q Consensus 114 ~~~~g~~~s~~~lg~~~~~~~~G~l~dr~~Grk~~~~~~~~~~~i~~~~~~~~~--~~~~l~~~r~l~G~~~~~~~~~~~ 191 (525)
+...+.+..+..++..++.+++++++|| +|+|+++..+.++.+++.++..+.+ |.+.+++.-++.|++.+...+...
T Consensus 259 ~~~~~~~~~~~~~~~~v~~~~~~~l~~r-~gk~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~gi~~~~~~~~~~ 337 (428)
T PF13347_consen 259 EGLISIFMLIFFVASIVGSPLWGRLSKR-FGKKKVYIIGLLLAALGFLLLFFLGPGSPWLVLILFILAGIGYGAFFVIPW 337 (428)
T ss_pred chhhHHHHHHHHHHHHHHHHHHHHHHHH-ccceeehhhhHHHHHHHHHHHHHHHhhhHHHHHHHHHHhHhhhcccccccc
Confidence 3567888889999999999999999999 9999999999999999999988886 999999999999999999999999
Q ss_pred eeeEeeecC-------cchhhHHhHHHHHHHHHHHHHHHH-HHhc
Q 041759 192 VLLTEKVGT-------EWRGLVGILDSFFFTIGTLTLPAI-AYTN 228 (525)
Q Consensus 192 ~~i~~~~~~-------~~r~~~~~~~~~~~~~G~~l~~~l-~~~~ 228 (525)
++++|..+. ++.|...+.++...-+|..+++.+ +.++
T Consensus 338 a~~ad~id~~e~~tg~r~~g~~~s~~~~~~k~~~~la~~i~g~~l 382 (428)
T PF13347_consen 338 AMLADVIDYDEWKTGRRREGMYFSVNSFFIKIGQGLAGAIVGLLL 382 (428)
T ss_pred cccccchhhHHHhcCCCchHHHHHhhhhhhHHHHHHHHHHHHHHH
Confidence 999998873 445888999999999999988876 4443
No 238
>COG3104 PTR2 Dipeptide/tripeptide permease [Amino acid transport and metabolism]
Probab=98.66 E-value=7.6e-08 Score=92.76 Aligned_cols=145 Identities=11% Similarity=0.078 Sum_probs=113.1
Q ss_pred cCChhHHHHHHHHHhcccccccCchhHHHHHHHHHhh-cChhHHHHHHHHHHHHHHHHHHhc-cccccchhHHHHHHHHH
Q 041759 351 LGFDIYLGVVFNALLEIPNLASTIPSFFLTFFLIQKW-NRKSSLLVLFIISGICSIMAVVAN-DISNAGKRMRIGLELAS 428 (525)
Q Consensus 351 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~d~~-g~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~ 428 (525)
+|++...+..+.+.... ..-+..+++||++||+ |+|+.+..+.+++.++.+++.... .. ....++.+.+.
T Consensus 56 Lg~~~~~A~~l~~~y~s----lVY~t~i~GG~laDr~LG~~~tI~lGail~~iGh~~L~~~~~~~----~~gl~i~L~~I 127 (498)
T COG3104 56 LGFDETHATGLFSAYGS----LVYLTPIIGGWLADRVLGTRRTIVLGAILMAIGHLVLAISSVSG----PGGLYIGLALI 127 (498)
T ss_pred CCcChHhhHHHHHHHHH----HHHHHHHHHHHHHHHhcchhHHHHHHHHHHHHHHHHHhcccccc----ccHHHHHHHHH
Confidence 55887777666655544 3335778899999995 999999999999999999998874 22 23566666677
Q ss_pred HHHHHHHHHHHHhhhccccCcc--hhhhhhHHHHHHHHHHHHHHHHHHhh--ccCchhHHHHHHHHHHHHHHHHHHhcc
Q 041759 429 LFSAYIAYTVIFIYAIELFPTC--VRNSATSIMRLAIIFAAIFSSVLVAA--GSNNEFVSYGVFGLVIICCGFFVICLP 503 (525)
Q Consensus 429 ~~~~~~~~~~~~~~~~~~~p~~--~r~~~~~~~~~~~~~g~~~~p~i~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~ 503 (525)
..+.|..=+....++.|.+|++ .|..++++.++..++|++++|++.++ ...++...|...++...++.+.++..+
T Consensus 128 ~iG~Gl~K~NiS~llg~ly~~~DprrD~gFt~fY~~iNiGsl~~p~i~~~~~~~~g~~~gF~~aavGm~~gl~~f~~~~ 206 (498)
T COG3104 128 IVGTGLFKPNISSLLGELYPKDDPRRDGGFTLFYMGINIGSLIAPIITGLLAINYGWHVGFGLAAVGMIIGLVIFLLGR 206 (498)
T ss_pred HhccccccccHHHHHHHhcCCCCcccCCCccEEEEEeehHHHHHHHHHHHHHHhhCHHHHHHHHHHHHHHHHHHHHHcc
Confidence 7888888888999999999764 36677777788889999999999985 445678888888888888877766654
No 239
>KOG0637 consensus Sucrose transporter and related proteins [Carbohydrate transport and metabolism]
Probab=98.65 E-value=2e-08 Score=95.09 Aligned_cols=125 Identities=14% Similarity=0.166 Sum_probs=98.5
Q ss_pred ccceeeccccccchhhhhhhHHHHHHHHHHHhHHhhHhcccc---cCCchHHHH-HHHHHHHHHHHHHHhhhhHH-----
Q 041759 100 ALTIISEWGLECSSAFIKGLPAASHFTGCLLGIVFLATLADS---SLGRKNLLF-LSCLTMSVATSLTIFSNNLW----- 170 (525)
Q Consensus 100 ~~~i~~~~~~~~~s~~~~g~~~s~~~lg~~~~~~~~G~l~dr---~~Grk~~~~-~~~~~~~i~~~~~~~~~~~~----- 170 (525)
.+++.+++|+ +....+.+--...+...+.+++.|..+|| ||||||.++ .+.+...++.++..++.++.
T Consensus 55 ~tPyl~~lGv---phk~~S~iw~~gPi~G~~vQP~vG~~SDrc~sr~GRRRPfI~~~s~~i~~~l~Lig~aaDig~~lgd 131 (498)
T KOG0637|consen 55 LTPYLQSLGV---PHKWSSIIWLCGPLSGLLVQPLVGSASDRCTSRYGRRRPFILAGSLLIAVSLFLIGYAADIGLLLGD 131 (498)
T ss_pred ccHHHHHcCC---CcccccccccccccccceecccccccccccccccccccchHHHhhHHHHHHHhhhhhHhhhhHHhcC
Confidence 6778888999 78888888888888889999999999998 799877655 46666677777777765433
Q ss_pred ------------HHHHHHHHHhhcccchhhhhheeeEeeecCcchhh-HHhHHHHHHHHHHHHHHHHHHh
Q 041759 171 ------------IYSLLRFFSGISRATIGTCTIVLLTEKVGTEWRGL-VGILDSFFFTIGTLTLPAIAYT 227 (525)
Q Consensus 171 ------------~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~-~~~~~~~~~~~G~~l~~~l~~~ 227 (525)
.++++--+.=++.......+-+++.|...++++.+ +.+++..+.++|.++|..++..
T Consensus 132 ~~~~~~~~rai~~~~lg~~LLD~A~n~~qgp~ra~L~Dl~~~d~~~~~Ans~f~~f~avGnvLGY~~g~y 201 (498)
T KOG0637|consen 132 NERKPVKPRAIVLFILGFWLLDVANNTLQGPCRALLADLARGDAKKTRANSVFSFFMAVGNVLGYALGSY 201 (498)
T ss_pred CcccccchHHHHHHHHHhHHHHhhhhhhhhhHHHHHHHhccChhhhhccchhHHHHHHhcceeeeecccc
Confidence 34444455555666778888999999998776666 9999999999999999888653
No 240
>COG0738 FucP Fucose permease [Carbohydrate transport and metabolism]
Probab=98.60 E-value=1.5e-06 Score=81.64 Aligned_cols=132 Identities=9% Similarity=-0.062 Sum_probs=110.5
Q ss_pred HHHHhhhhhcccccCChhHHHHHHHHHhcccccccCchhHHHHHHHHHhhcChhHHHHHHHHHHHHHHHHHHhccccccc
Q 041759 338 GVVYYGMTLGIENLGFDIYLGVVFNALLEIPNLASTIPSFFLTFFLIQKWNRKSSLLVLFIISGICSIMAVVANDISNAG 417 (525)
Q Consensus 338 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~d~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 417 (525)
....-.+|.+.+.++.+..+++.+...... +..++.+..+++.+|+|.|+-++.++.++++++.++.-.... ..
T Consensus 30 ~l~diLip~l~~~f~ls~~~a~liqfaff~----gYf~~~lpa~~~~kk~gyk~gi~lgL~l~avg~~lF~pAa~~--~~ 103 (422)
T COG0738 30 CLNDILIPHLKEVFDLTYFEASLIQFAFFG----GYFIMSLPAGLLIKKLGYKAGIVLGLLLYAVGAALFWPAASS--KS 103 (422)
T ss_pred hcchhhHHHHHHHhCccHHHHHHHHHHHHH----HHHHHhccHHHHHHHhhhHHHHHHHHHHHHHHHHHHhhhhhh--hh
Confidence 344555677777788888888877766666 667888899999999999999999999999999998765544 24
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHhhhccccCcchhhhhhHHHHHHHHHHHHHHHHHHh
Q 041759 418 KRMRIGLELASLFSAYIAYTVIFIYAIELFPTCVRNSATSIMRLAIIFAAIFSSVLVA 475 (525)
Q Consensus 418 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~r~~~~~~~~~~~~~g~~~~p~i~~ 475 (525)
+...+...++.+.+.+........++..+.|++....-+.+.+.++.+|++++|++.+
T Consensus 104 y~~FL~~lFila~Gi~~LetaaNp~v~~lg~~~~a~~rlnl~q~fn~lGa~~gp~~g~ 161 (422)
T COG0738 104 YGFFLVALFILASGIGLLETAANPYVTLLGKPESAAFRLNLAQAFNGLGAILGPLLGS 161 (422)
T ss_pred HHHHHHHHHHHHhhhHHHHhccchHHHHhCCchhHHHHHHHHHHhhhhHHHHHHHHHH
Confidence 5567777788888888888899999999999888888899999999999999999987
No 241
>PF06609 TRI12: Fungal trichothecene efflux pump (TRI12); InterPro: IPR010573 This family consists of several fungal specific trichothecene efflux pump proteins. Many of the genes involved in trichothecene toxin biosynthesis in Fusarium sporotrichioides are present within a gene cluster. It has been suggested that TRI12 may play a role in F. sporotrichioides self-protection against trichothecenes [].
Probab=98.59 E-value=7.3e-07 Score=90.03 Aligned_cols=144 Identities=13% Similarity=0.084 Sum_probs=99.3
Q ss_pred hhhcccccCChhHHHHHHHHHhcccccccCchhHHHHHHHHHhhcChhHHHHHHHHHHHHHHHHHHhccccccchhHHHH
Q 041759 344 MTLGIENLGFDIYLGVVFNALLEIPNLASTIPSFFLTFFLIQKWNRKSSLLVLFIISGICSIMAVVANDISNAGKRMRIG 423 (525)
Q Consensus 344 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~d~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 423 (525)
+++...++|.+..... +.....+ +..++.++.|+++|.+|||..++.+.++..++.++.....+. ...+.
T Consensus 67 l~~I~~diG~~~~~~w-~~~~~~l----~~av~~~~~G~LSDlfGRr~~~i~g~~l~vvG~Iv~atA~~~-----~~~ia 136 (599)
T PF06609_consen 67 LPYINADIGGSDNWSW-FSTAWTL----ASAVSFPFVGRLSDLFGRRYFFIIGSLLGVVGSIVCATAQNM-----NTFIA 136 (599)
T ss_pred HHHHHHhcCCCccchH-HHHHHHH----HHHHHHHhhHHHHHHhcchHHHHHHHHHHHhHHHHhhcCCcH-----HHHHH
Confidence 3555666776543332 2222333 455788899999999999999999999999999988776554 45667
Q ss_pred HHHHHHHHHHHHHHHHHhhhccccCcchhhhhhHHHHHHHHHHHHHHHHHHhh--ccCchhHHHHHHHHHHHHHHHH
Q 041759 424 LELASLFSAYIAYTVIFIYAIELFPTCVRNSATSIMRLAIIFAAIFSSVLVAA--GSNNEFVSYGVFGLVIICCGFF 498 (525)
Q Consensus 424 ~~~~~~~~~~~~~~~~~~~~~~~~p~~~r~~~~~~~~~~~~~g~~~~p~i~~~--~~~~~~~~~~~~~~~~~~~~~~ 498 (525)
...+.+++.+... .....++|+.|.+.|..+.++...........+|.+... ...++.+.|++.++...++.++
T Consensus 137 g~~l~GvgaG~~~-~~~~~isEl~p~k~R~~~~~~~~~~~i~~~~~~~~ia~~~~~~~~WRw~~~~~~i~~~i~~vl 212 (599)
T PF06609_consen 137 GMVLYGVGAGVQE-LAALAISELVPNKWRGLGLAIASIPFIITTWISPLIAQLFAAHSGWRWIFYIFIIWSGIALVL 212 (599)
T ss_pred HHHHHHHhhHHHH-HHHHHHHHhcccchhhhHhHHHHHHHHhhhcccHHHHHHhccCCCcchHHHHHHHHHHHHHHH
Confidence 7777777765554 455668999999999887776665554445566777652 2345677777776665555543
No 242
>PF13000 Acatn: Acetyl-coenzyme A transporter 1; InterPro: IPR024371 Acetyl-coenzyme A transporter 1 (also known as acatn) is a multipass transmembrane protein that appears to promote 9-O-acetylation in gangliosides [, ]. This entry represents acatn and its homologues.; GO: 0008521 acetyl-CoA transporter activity, 0016021 integral to membrane
Probab=98.55 E-value=1.3e-05 Score=77.53 Aligned_cols=270 Identities=11% Similarity=0.055 Sum_probs=134.0
Q ss_pred hcccchhhhhheeeEeeecCcchhhHHhHHHHHHHHHHHHHHHHHHhccC--------------Cc---hHHHHHHHHHH
Q 041759 181 ISRATIGTCTIVLLTEKVGTEWRGLVGILDSFFFTIGTLTLPAIAYTNRS--------------SS---WTIIYLWTSIP 243 (525)
Q Consensus 181 ~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~l~~~l~~~~~~--------------~~---wr~~f~~~~~~ 243 (525)
+-++.-..+.-.+.-.+..+++++.+..-...+.++|..++..+-..+.+ .| -..-..+.+..
T Consensus 130 fl~ATQDIAVDGWALT~Ls~~n~~~ASTcqtvG~~~Gyfls~tvFlalns~~f~Nky~r~~p~~~glvtl~~yl~fwg~~ 209 (544)
T PF13000_consen 130 FLCATQDIAVDGWALTMLSPENVGYASTCQTVGQTAGYFLSFTVFLALNSPDFCNKYLRSTPSDEGLVTLSGYLKFWGWV 209 (544)
T ss_pred HHHccCCceeehhhhhhcChhhcchHHHHHHhHhhhhHHHHHHHHHhhCCHHHHHHhcccCCCCCCeeeHHHHHHHHHHH
Confidence 33343444444555556677888888888888888888776654222211 11 12223344555
Q ss_pred HHHHHhHhheeecCCchHhhhcCCHHHHHHHHHhhCCCcCCccchhhhhhhccCC-CCcccccccccchhhhhhhhcchh
Q 041759 244 TLVYSGLLYIFVSESPRWLFMQGRQEEAVEVIKSLSPIKDSNQLSLSLVSAVSFG-HEPAASSKESSFLSSIRELFVRRW 322 (525)
Q Consensus 244 ~~~~~~~~~~~lpesp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~l~~~~~ 322 (525)
.++..+...++-+|.|.-- ...+.+... . .+++..+.+ .+..++. ...++...-+.....+.+++|-|+
T Consensus 210 ~l~~T~~v~~~k~E~~~~~-~~~~~~~~~-------~-~~~~~~~~~-~~~~~~~~~~~~~~~~i~~~Y~~l~~ilkLp~ 279 (544)
T PF13000_consen 210 FLIVTILVAFFKKEKPHSE-SLPKIEPIN-------K-SDGKSKEIS-IEYDESDVISTEEILSIKDVYKSLWKILKLPN 279 (544)
T ss_pred HHHHHHHHheEeecccccc-cCccccccc-------c-ccccccccc-eecccccccchhhhhhHHHHHHHHHHHHcCch
Confidence 5555545566666654210 000000000 0 000000000 0000000 000000011122345667788888
Q ss_pred HHHHHHHHHHHHHHHHHHHhhhhhcccccCChhHHHHHHHHHhcccccccCchhHHHHHHHHHhh--cChh---------
Q 041759 323 ALERTLALMVPGFGIGVVYYGMTLGIENLGFDIYLGVVFNALLEIPNLASTIPSFFLTFFLIQKW--NRKS--------- 391 (525)
Q Consensus 323 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~d~~--g~~~--------- 391 (525)
.+...++.+..-.+.....-...+-+-+.|++....+.+. +..+ +..++.++++-|+ |+++
T Consensus 280 V~~li~ilL~~KigF~a~da~T~LKLlEkG~~KE~LAl~~-li~~-------P~qii~~~~~~Kws~g~~P~~~~~~~l~ 351 (544)
T PF13000_consen 280 VQTLIIILLTAKIGFQANDAVTSLKLLEKGLSKEDLALLV-LIDF-------PFQIILPYYIGKWSAGSPPLDVDNKALP 351 (544)
T ss_pred HHHHHHHHHHHHhccccchhhhHHHHHHcCCCHHHhHHHH-HHhh-------hHHHHHHHHhhhhhcCCCcccccccccc
Confidence 7766666555555544444444555556787766555443 4445 6677777777775 2331
Q ss_pred --------------------HHHHHHHHHHHHH----HHHHHhccccc---cchhHHHHHHHHHHHHHHHHHHHHHhhhc
Q 041759 392 --------------------SLLVLFIISGICS----IMAVVANDISN---AGKRMRIGLELASLFSAYIAYTVIFIYAI 444 (525)
Q Consensus 392 --------------------~~~~~~~~~~~~~----~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 444 (525)
....++..-.+.. .+....+.... .-+...++..++..+.....+....++-+
T Consensus 352 ~~~~~~~~~~~l~g~~g~L~~Wl~af~gRL~~a~l~~~iV~~fP~~g~v~~~Yf~lvI~~~~l~sf~stvmFVai~AFha 431 (544)
T PF13000_consen 352 NFSRANKIIRLLVGDAGALRPWLWAFWGRLVAALLAQLIVYFFPSDGPVPTYYFLLVIIQHVLSSFMSTVMFVAIMAFHA 431 (544)
T ss_pred ccccccchhhhhhccchhhHHHHHHHHHHHHHHHHHHheEEeCCCCCCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 1111221111111 11111221100 11223344445555556666677788888
Q ss_pred cccCcchhhhhhHHHHHHHHHHHH
Q 041759 445 ELFPTCVRNSATSIMRLAIIFAAI 468 (525)
Q Consensus 445 ~~~p~~~r~~~~~~~~~~~~~g~~ 468 (525)
.+.++..-|+.|.+.|++.++|+-
T Consensus 432 rISDP~IGGTYMTLLNTvSNLGGt 455 (544)
T PF13000_consen 432 RISDPAIGGTYMTLLNTVSNLGGT 455 (544)
T ss_pred hccCcccchHHHHHHHHHHhcCCC
Confidence 999999999999999999999865
No 243
>KOG4686 consensus Predicted sugar transporter [Carbohydrate transport and metabolism]
Probab=98.55 E-value=3.5e-07 Score=80.99 Aligned_cols=141 Identities=15% Similarity=0.073 Sum_probs=105.1
Q ss_pred ceeeccccccchhhhhhhHHHHHHHHHHHhHHhhHhcccccCCchHHHHHHHHHHH-HHHHHHHhhhhHHHHHHHHHHHh
Q 041759 102 TIISEWGLECSSAFIKGLPAASHFTGCLLGIVFLATLADSSLGRKNLLFLSCLTMS-VATSLTIFSNNLWIYSLLRFFSG 180 (525)
Q Consensus 102 ~i~~~~~~~~~s~~~~g~~~s~~~lg~~~~~~~~G~l~dr~~Grk~~~~~~~~~~~-i~~~~~~~~~~~~~l~~~r~l~G 180 (525)
-+++.||+ |+...+.+.+.-..-.++.+++.|.++|| +|++...+.+..+.. ++-.+..| +++.=.++..+.|
T Consensus 290 fF~~rfGl---S~~~a~~i~s~vy~Isav~spvfg~i~Dk-~G~n~~wv~~a~~~tl~~H~~l~F--t~lsPy~~m~~lG 363 (459)
T KOG4686|consen 290 FFQKRFGL---SAVSAGNILSTVYGISAVLSPVFGAISDK-YGFNLWWVASACILTLLGHSGLFF--TFLSPYTSMTFLG 363 (459)
T ss_pred HHHHhhCC---ChhhccchhhhhhhhhhhhhhhHHHhHhh-hcceehhHHHHHHHHHHHhhhHHh--hhccHHHHHHHHh
Confidence 57889999 99999999999888889999999999999 999988777555443 33333333 3444456777888
Q ss_pred hcccchhhhhheeeEeeecCcchhhHHhHHHHHHHHHHHHHHHHHHhc-cC---CchHHHHHH-HHHHHHHHH
Q 041759 181 ISRATIGTCTIVLLTEKVGTEWRGLVGILDSFFFTIGTLTLPAIAYTN-RS---SSWTIIYLW-TSIPTLVYS 248 (525)
Q Consensus 181 ~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~l~~~l~~~~-~~---~~wr~~f~~-~~~~~~~~~ 248 (525)
++...........++...|+++.|.+.+..+...++|..+.|+++.++ +. +.|--+|.+ .+.+++...
T Consensus 364 LsysllAcslWP~va~~vpE~qLGTaygf~qsIqNLgla~i~Iiag~i~d~~g~y~~le~ffl~~~~~aL~sv 436 (459)
T KOG4686|consen 364 LSYSLLACSLWPCVASLVPEEQLGTAYGFIQSIQNLGLAFIPIIAGFIADGDGSYDNLEAFFLIIGLMALTSV 436 (459)
T ss_pred hhHHHHHHHHhhhhhhhCCHHHhcchHHHHHHHHhhhhhHHhhhhheeecCCCchhhHHHHHHHHHHHHHHHH
Confidence 887766665667778888999999999999999999999999996554 32 335445544 444444444
No 244
>KOG0254 consensus Predicted transporter (major facilitator superfamily) [General function prediction only]
Probab=98.52 E-value=1.2e-06 Score=89.64 Aligned_cols=138 Identities=17% Similarity=0.198 Sum_probs=111.3
Q ss_pred HHHHHHhcccccccCchhHHHHHHHHHhhcChhHHHHHHHHHHHHHHHHHHhccccccchhHHHHHHHHHHHHHHHHHHH
Q 041759 359 VVFNALLEIPNLASTIPSFFLTFFLIQKWNRKSSLLVLFIISGICSIMAVVANDISNAGKRMRIGLELASLFSAYIAYTV 438 (525)
Q Consensus 359 ~~~~~~~~~~~~~~~~~~~~~~~~l~d~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 438 (525)
..+.+...+ +..++.++.|+++|++|||+.+.++.+...++.++.....+. ..+.+.-++.|++.+....+
T Consensus 92 s~~~s~~~l----ga~~g~l~~g~l~d~~GRk~~l~~~~~~~~iG~ii~~~a~~~-----~~l~~GR~l~G~g~G~~~~~ 162 (513)
T KOG0254|consen 92 GLLTSILNL----GALVGSLLAGRLGDRIGRKKTLLLAVVLFLIGAIIIALAPSW-----YQLIVGRILTGLGVGGASVL 162 (513)
T ss_pred HHHHHHHHH----HHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHhhhH-----HHHHHHHHHhccchhhhhhc
Confidence 566666666 777999999999999999999999999999999999888754 57888999999999999999
Q ss_pred HHhhhccccCcchhhhhhHHHHHHHHHHHHHHHHHHhhcc---CchhHHHHHHHHHHHHHHHHHHhccCC
Q 041759 439 IFIYAIELFPTCVRNSATSIMRLAIIFAAIFSSVLVAAGS---NNEFVSYGVFGLVIICCGFFVICLPET 505 (525)
Q Consensus 439 ~~~~~~~~~p~~~r~~~~~~~~~~~~~g~~~~p~i~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~ 505 (525)
...+.+|..|++.||...+..+....+|..++-.+..... .++...+.+..+.+++..+..+++||+
T Consensus 163 ~piy~sEiap~~~RG~l~~~~~l~~~~Gi~~~~~~~~~~~~~~~~Wr~~~~~~~i~~~~~~~~~~~~pes 232 (513)
T KOG0254|consen 163 APVYISEIAPAHIRGTLVSLYQLFITIGILLGYCINYGTSKVYAGWRIPLGLALIPAVILALGMLFLPES 232 (513)
T ss_pred chhhHhhcCChhhhHHHHHHHHHHHHHHHHHHHHHhhhhccCCccHHHHHHHHHHHHHHHHHHHHhCCCC
Confidence 9999999999999999999999988888888833333222 245566666666666555556666764
No 245
>COG2211 MelB Na+/melibiose symporter and related transporters [Carbohydrate transport and metabolism]
Probab=98.46 E-value=1.8e-05 Score=77.21 Aligned_cols=115 Identities=17% Similarity=0.301 Sum_probs=96.5
Q ss_pred hhhhhhhHHHHHHHHHHHhHHhhHhcccccCCchHHHHHHHHHHHHHHHHHHhhh--hHHHHHHHHHHHhhcccchhhhh
Q 041759 113 SAFIKGLPAASHFTGCLLGIVFLATLADSSLGRKNLLFLSCLTMSVATSLTIFSN--NLWIYSLLRFFSGISRATIGTCT 190 (525)
Q Consensus 113 s~~~~g~~~s~~~lg~~~~~~~~G~l~dr~~Grk~~~~~~~~~~~i~~~~~~~~~--~~~~l~~~r~l~G~~~~~~~~~~ 190 (525)
++.+..+.......+.+++.+++.++.+| +|+|+++.++.++..++.++..+.+ +.+.+++..++.++|.+...+..
T Consensus 270 ~~l~~~~~~~~~~~~~l~~~~~~p~L~~~-~gkk~~~~~~~~~~~i~~~~~~f~~~~~~~l~~~~~~i~~~g~~~~~~l~ 348 (467)
T COG2211 270 PELFAYLLLLASGAGLLIGLILWPRLVKK-FGKKKLFLIGLLLLAVGYLLLYFTPAGSVVLIVVALIIAGVGTGIANPLP 348 (467)
T ss_pred hHHHHHHHHHHHHHHHHHHHHhHHHHHHH-hchHHHHHHHHHHHHHHHHHHHhhcCcchHHHHHHHHHHHHHhhcccccc
Confidence 66677778888888888889999999999 9999999999999999999988875 78899999999999999999999
Q ss_pred heeeEeeec-------CcchhhHHhHHHHHHHHHHHHHHHH-HHhc
Q 041759 191 IVLLTEKVG-------TEWRGLVGILDSFFFTIGTLTLPAI-AYTN 228 (525)
Q Consensus 191 ~~~i~~~~~-------~~~r~~~~~~~~~~~~~G~~l~~~l-~~~~ 228 (525)
.++++|..+ .+.-|...+....+.=+|.+++..+ ++.+
T Consensus 349 wam~~d~vDyge~~TG~R~eGi~~s~~tF~~K~g~ala~~~~g~~L 394 (467)
T COG2211 349 WAMVADTVDYGEWKTGVRREGIVYSGMTFFRKLGLALAGFIPGWIL 394 (467)
T ss_pred HHHhcchhhHHHHHhCCCchhhHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 999988764 2344677777777777888887655 5544
No 246
>KOG3574 consensus Acetyl-CoA transporter [Inorganic ion transport and metabolism]
Probab=98.45 E-value=1.9e-05 Score=73.26 Aligned_cols=339 Identities=10% Similarity=0.018 Sum_probs=182.4
Q ss_pred HHHHHHHHHHHHHHHHHHhhhcccCccccccCCCCCCCCCCCCCCCCCCceecCCCCccccceeeccccccchhhhhhhH
Q 041759 41 QAILVSLASLFDSQQSFISVYTEAEPTWHCLNNTTCSSASNICMFPKSSWAWDGNPTTTALTIISEWGLECSSAFIKGLP 120 (525)
Q Consensus 41 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~c~~~~~~~~~~~~p~~~~~~i~~~~~~~~~s~~~~g~~ 120 (525)
.+..+.+.+...+....... + .|-+-+.=|+ |..+.+..
T Consensus 32 ~illLl~LYllQGiP~GL~~-~-------------------------------------iP~lL~ak~v---Syt~~a~f 70 (510)
T KOG3574|consen 32 SILLLLFLYLLQGIPLGLIG-A-------------------------------------IPLLLQAKGV---SYTSQAIF 70 (510)
T ss_pred hHHHHHHHHHHcCCchhHhh-h-------------------------------------hHHHhcCCCc---chhhhhhh
Confidence 45555666777777777766 5 5666666666 66666654
Q ss_pred HHHHHHHHHHhHHhhHhccc-----ccCCchHHHHH-HHHHHHHHHHHHHhh-----------hhHHHHHHHHHHHhhcc
Q 041759 121 AASHFTGCLLGIVFLATLAD-----SSLGRKNLLFL-SCLTMSVATSLTIFS-----------NNLWIYSLLRFFSGISR 183 (525)
Q Consensus 121 ~s~~~lg~~~~~~~~G~l~d-----r~~Grk~~~~~-~~~~~~i~~~~~~~~-----------~~~~~l~~~r~l~G~~~ 183 (525)
.-++. - ..--+.+.++.| | +||||..++ +..+.+...++.+.- ++...+....++.-+.+
T Consensus 71 S~ay~-P-~sLKllWaPiVDs~y~k~-~GrrksWvvp~q~llG~~mllLs~~v~~~~g~ng~~p~v~~lt~~f~LLnfla 147 (510)
T KOG3574|consen 71 SFAYW-P-FSLKLLWAPIVDSVYSKR-FGRRKSWVVPCQYLLGLFMLLLSYLVDRGLGGNGGLPNVVALTLLFLLLNFLA 147 (510)
T ss_pred hhhhh-H-HHHHHHHHhhhHHHHHHh-hccccceeeehHHHHHHHHHHHhhCCCcccccCCCCcchHHHHHHHHHHHHHH
Confidence 33321 1 122457888888 8 999987654 444444444444331 23334444556666677
Q ss_pred cchhhhhheeeEeeecCcchhhHHhHHHHHHHHHHHHHHHHHHhccC--------CchH---------HHHHHHHHHHHH
Q 041759 184 ATIGTCTIVLLTEKVGTEWRGLVGILDSFFFTIGTLTLPAIAYTNRS--------SSWT---------IIYLWTSIPTLV 246 (525)
Q Consensus 184 ~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~l~~~l~~~~~~--------~~wr---------~~f~~~~~~~~~ 246 (525)
+......-.+.-.+..+++-|.+......+.+.|.+++..+-..+.. .+|. .-.++.+.+.++
T Consensus 148 AtQDIAVDgwALtmLs~e~lgyaST~q~Vg~~~GyfL~~~ifLaL~s~dF~N~y~rs~P~~~g~ItL~gy~~fwg~~~~v 227 (510)
T KOG3574|consen 148 ATQDIAVDGWALTMLSRENLGYASTCQSVGQTAGYFLGNVVFLALESPDFCNTYLRSIPLDQGFITLAGYLWFWGALFIV 227 (510)
T ss_pred hhhhhhhhHHHHHhcCHhhcCchhHHHHHHHhhhHHhhcceeeEecChhhhhHHHhcCcCccceEEhhHHHHHHHHHHHH
Confidence 76777777777777788888888888888888888877654211110 1111 122333333333
Q ss_pred HHhHhheeecCCchHhhhcCCHHHHHHHHHhhCCCcCCccchhhhhhhccCCCCcccccccccchhhhhhhhcchhHHHH
Q 041759 247 YSGLLYIFVSESPRWLFMQGRQEEAVEVIKSLSPIKDSNQLSLSLVSAVSFGHEPAASSKESSFLSSIRELFVRRWALER 326 (525)
Q Consensus 247 ~~~~~~~~lpesp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~ 326 (525)
...+..++-+|.+ ++..+ ++..+.. ..++.++++++-|..+..
T Consensus 228 at~Lv~~~kke~~--------~~~~~---------e~~~~i~--------------------~~yk~l~~vLklk~v~~l 270 (510)
T KOG3574|consen 228 ATTLVALLKKEND--------ESVDE---------ELELGIH--------------------ESYKLLRDVLKLKSVRWL 270 (510)
T ss_pred HHHHHHHhcCCCc--------hhhhh---------hhhcCHH--------------------HHHHHHHHHHcCccHHHH
Confidence 3312222222211 11000 0000000 001356777887776666
Q ss_pred HHHHHHHHHHHHHHHhhhhhcccccCChhHHHHHHHHHhcccccccCchhHHHHHHHHHhhc--ChhHH------HHHHH
Q 041759 327 TLALMVPGFGIGVVYYGMTLGIENLGFDIYLGVVFNALLEIPNLASTIPSFFLTFFLIQKWN--RKSSL------LVLFI 398 (525)
Q Consensus 327 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~d~~g--~~~~~------~~~~~ 398 (525)
..+....-++........+.-+-+.|.+...-+.+. + ..++..+..++..-|+. +|++. ..=..
T Consensus 271 a~i~lt~K~gf~a~da~t~LkLle~Gv~ke~Lal~~-v-------~~~plqI~l~~~~gk~ta~~~pl~~~lka~~~R~~ 342 (510)
T KOG3574|consen 271 AGILLTGKLGFQAADALTSLKLLEHGVPKEELALIA-V-------PLVPLQIALPLYIGKWTAGPRPLNVFLKAVPYRLG 342 (510)
T ss_pred HHHHHHHHHHhhhhhhccchHHHHcCCChhHheeee-e-------ehhhHHHhhhhhheeecCCCCcchHHHHhhhHHHH
Confidence 555555555554444445666667788766654433 2 23356666666655542 22211 11111
Q ss_pred HHHHHHHHHHHhccccc-------cchhHHHHHHHHHHHHHHHHHHHHHhhhccccCcchhhhhhHHHHHHHHHHHH
Q 041759 399 ISGICSIMAVVANDISN-------AGKRMRIGLELASLFSAYIAYTVIFIYAIELFPTCVRNSATSIMRLAIIFAAI 468 (525)
Q Consensus 399 ~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~r~~~~~~~~~~~~~g~~ 468 (525)
......++..+.+.... ......+....+........+....+..+++.++...|+.+.+.++..++|+-
T Consensus 343 ~~~~~t~Lv~~~~~~~~~~G~~~~~~~il~i~~y~~~~~~~ts~fv~~maf~aqisdp~iggTymTlLNTLsnLGg~ 419 (510)
T KOG3574|consen 343 GGLVQTALVWWTPTLGHSDGTFPRGYYILLITSYAFHQVFVTSMFVSGMAFHAQISDPAIGGTYMTLLNTLSNLGGN 419 (510)
T ss_pred HHHHHHHHHhhhcccccCCCceeechHHHHHHHHHHhhhHHHHHHHHHHHHHhhcCCcccCccHHHHHHHHHHhcCC
Confidence 22222222222222110 01112222234444555556667778889999999999999999999988865
No 247
>TIGR00788 fbt folate/biopterin transporter. The only functionally characterized members of the family are from protozoa and include FT1, the major folate transporter in Leishmania, and BT1, the Leishmania biopterin/folate transporter. A related protein in Trypanosoma brucei, ESAGIO, shows weak folate/biopterin transport activity.
Probab=98.43 E-value=5.5e-07 Score=90.73 Aligned_cols=148 Identities=11% Similarity=0.032 Sum_probs=116.4
Q ss_pred eccccccchhhhhhhHHHHHHHHHHHhHHhhHhcccccCCchHHHHHHHHHHHHHHHHHHhh----------hhHHHHHH
Q 041759 105 SEWGLECSSAFIKGLPAASHFTGCLLGIVFLATLADSSLGRKNLLFLSCLTMSVATSLTIFS----------NNLWIYSL 174 (525)
Q Consensus 105 ~~~~~~~~s~~~~g~~~s~~~lg~~~~~~~~G~l~dr~~Grk~~~~~~~~~~~i~~~~~~~~----------~~~~~l~~ 174 (525)
+++|. ++.+.|++.....++..++....+++.+| ++.|+++.++.++.+++.+..... ++.+.++.
T Consensus 281 ~~lG~---s~~~~G~~~~~~~v~~i~g~~~~~~~~~~-~~~r~~l~~~~~l~~~~~~~~~~l~~~~~~~~gi~~~~~~~~ 356 (468)
T TIGR00788 281 QCLPG---GPSFSGMSKVVGNLGSLCGVGGYDRFLKT-FPYRLLFGVTTLLYTLSSLFDLILVKRWNLAFGISDEVFVLG 356 (468)
T ss_pred ccCCC---CcchhhhHHHHHHHHHHHHHHHHHHHHhh-CCHHHHHHHHHHHHHHHHhCceeeeeccccccCCCCeeeeee
Confidence 46788 99999999999999999999999999999 999999999999999888654311 34445666
Q ss_pred HHHHHhhcccchhhhhheeeEeeecCcchhhHHhHHHHHHHHHHHHHHHHHHhc-c-------CCchHHHHHH-HHHHHH
Q 041759 175 LRFFSGISRATIGTCTIVLLTEKVGTEWRGLVGILDSFFFTIGTLTLPAIAYTN-R-------SSSWTIIYLW-TSIPTL 245 (525)
Q Consensus 175 ~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~l~~~l~~~~-~-------~~~wr~~f~~-~~~~~~ 245 (525)
.-++.+++.+........++.+.+|++.++...++.+...++|..+++.++..+ . +++.++...+ ..+..+
T Consensus 357 ~~~l~~~~~g~~~~~~~~~~~~~~p~~~egt~~al~~s~~~lg~~v~~~~gg~l~~~~g~~~~~~~~~~~~i~i~~~~~l 436 (468)
T TIGR00788 357 DSIIAEVLAQLKFMPFLVLLARLCPSGCESSVFALLASILHLGSSVSGFLGVLLMETIGITCDNSNNLWLLILGHSLAPL 436 (468)
T ss_pred hhHHHHHHHHHHHccHHHHHHHhCCCCceehHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCcccccchHHHHHHHHHHHH
Confidence 678899999999999999999999999999999999999999999999875543 2 2333443333 333334
Q ss_pred HHHhHhheeecC
Q 041759 246 VYSGLLYIFVSE 257 (525)
Q Consensus 246 ~~~~~~~~~lpe 257 (525)
+.. ....++|+
T Consensus 437 ~~l-~~~~llP~ 447 (468)
T TIGR00788 437 LPL-PLLHLLPR 447 (468)
T ss_pred HHH-HHHHhCCC
Confidence 444 44457785
No 248
>PF06779 DUF1228: Protein of unknown function (DUF1228); InterPro: IPR010645 This entry represents the N terminus of several putative bacterial membrane proteins, which may be sugar transporters. Note that many members are hypothetical proteins.
Probab=98.42 E-value=3.1e-07 Score=66.45 Aligned_cols=73 Identities=22% Similarity=0.387 Sum_probs=67.6
Q ss_pred CCCccccceeeccccccchhhhhhhHHHHHHHHHHHhHHhhHhcccccCCchHHHHHHHHHHHHHHHHHHhhhhHHHHH
Q 041759 95 NPTTTALTIISEWGLECSSAFIKGLPAASHFTGCLLGIVFLATLADSSLGRKNLLFLSCLTMSVATSLTIFSNNLWIYS 173 (525)
Q Consensus 95 ~p~~~~~~i~~~~~~~~~s~~~~g~~~s~~~lg~~~~~~~~G~l~dr~~Grk~~~~~~~~~~~i~~~~~~~~~~~~~l~ 173 (525)
+|. +|.+++|.++ |..+.|++.+..++||++|++...++.++ ..+++.+..+++...+..+.+++.++.+.+.
T Consensus 12 Tpl--LP~M~~~~~l---s~~~ag~lasaNy~GYL~GAl~~~~~~~~-~~~~~~~~~~l~~~~~~~~~ma~~~~~~~w~ 84 (85)
T PF06779_consen 12 TPL--LPLMQADGGL---SLSQAGWLASANYLGYLVGALLASRLPRH-SRPRRLLRAGLLLTVLSTAAMALTHSFWLWS 84 (85)
T ss_pred HhH--hHHHHHhcCC---CHHHHHHHHHHHHHHHHHHHHHHHHHHhc-ccHHHHHHHHHHHHHHHHHHHHHHhchHHHh
Confidence 366 9999999999 99999999999999999999999999998 8889999999999999999999998877653
No 249
>PF06813 Nodulin-like: Nodulin-like; InterPro: IPR010658 This entry represents a conserved region within plant nodulin-like proteins and a number of uncharacterised proteins.
Probab=98.39 E-value=1e-05 Score=72.86 Aligned_cols=152 Identities=11% Similarity=0.027 Sum_probs=100.4
Q ss_pred hhcccccCChhHHHHHHHHHhcccccccCchhHHHHHHHHHhhcChhHHHHHHHHHHHHHHHHHHhcccc--ccchhHHH
Q 041759 345 TLGIENLGFDIYLGVVFNALLEIPNLASTIPSFFLTFFLIQKWNRKSSLLVLFIISGICSIMAVVANDIS--NAGKRMRI 422 (525)
Q Consensus 345 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~d~~g~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~ 422 (525)
+.+.+.+|++..+...+.....+ |..+| ++.|.+.|++|++.++.++.....++..++....... ..+.+...
T Consensus 26 ~~Lk~~l~~sq~~l~~l~~~~~~----G~~~G-~~~G~l~d~~gp~~~l~iG~~~~~~GY~~~~l~~~~~i~~~~~~~~~ 100 (250)
T PF06813_consen 26 PQLKSRLGYSQSQLNTLSTAGDI----GSYFG-ILAGLLYDRFGPWVVLLIGAVLGFVGYGLLWLAVSGRIPSLPVWLMC 100 (250)
T ss_pred HHHHHHhCCCHHHHHHHHHHHHH----Hhhcc-HHHHHHHHhcchHHHHHHHHHHHHHHHHHHHHHHhCccCccchHHHH
Confidence 45556689998888888877777 66554 7889999999999999999999999998887654331 11233444
Q ss_pred HHHHHHHHHHHHHHHHHHhhhccccCcchhhhhhHHHHHHHHHHHHHHHHHHh-hccCchhHHHHHHHHHHH-HHHHHHH
Q 041759 423 GLELASLFSAYIAYTVIFIYAIELFPTCVRNSATSIMRLAIIFAAIFSSVLVA-AGSNNEFVSYGVFGLVII-CCGFFVI 500 (525)
Q Consensus 423 ~~~~~~~~~~~~~~~~~~~~~~~~~p~~~r~~~~~~~~~~~~~g~~~~p~i~~-~~~~~~~~~~~~~~~~~~-~~~~~~~ 500 (525)
+..++.+.+.............+.+|. +||++.|+.-....+++.+...+.. ....+....+.+.+.... ++.+..+
T Consensus 101 ~~~~l~~~s~~~~~ta~lvt~~~NFP~-~RG~vvgilk~~~GLSaai~t~i~~~~f~~~~~~fll~la~~~~~v~l~~~~ 179 (250)
T PF06813_consen 101 LFLFLGGNSSCWFNTASLVTCVRNFPR-SRGTVVGILKGFFGLSAAIFTQIYSAFFGDDPSSFLLFLAVLPAVVCLVAMF 179 (250)
T ss_pred HHHHHHcccHHHhhhHHHHHHHHhCcc-ccCceehhhhHHHHhHHHHHHHHHHHHcCCChHHHHHHHHHHHHHHHHHHhh
Confidence 444444444444444555556678885 7999999999999988887776665 322233333444444333 3333334
Q ss_pred hc
Q 041759 501 CL 502 (525)
Q Consensus 501 ~~ 502 (525)
++
T Consensus 180 ~v 181 (250)
T PF06813_consen 180 FV 181 (250)
T ss_pred he
Confidence 44
No 250
>PRK11462 putative transporter; Provisional
Probab=98.38 E-value=1.4e-05 Score=80.48 Aligned_cols=109 Identities=14% Similarity=0.159 Sum_probs=74.8
Q ss_pred hhhhhHHHHHHHHHHHhHHhhHhcccccCCchHHHHHHHHHHHHHHHHHHhhh--hHHHHHHHHHHHhhcccchhhhhhe
Q 041759 115 FIKGLPAASHFTGCLLGIVFLATLADSSLGRKNLLFLSCLTMSVATSLTIFSN--NLWIYSLLRFFSGISRATIGTCTIV 192 (525)
Q Consensus 115 ~~~g~~~s~~~lg~~~~~~~~G~l~dr~~Grk~~~~~~~~~~~i~~~~~~~~~--~~~~l~~~r~l~G~~~~~~~~~~~~ 192 (525)
...+.+...+.++..++.+++++++|| +|+|+++..+..+.++..++..+.+ +.+.+++.-++.|++.+...+...+
T Consensus 263 ~~~~~~l~~~~i~~iig~~l~~~l~~r-~gkk~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~l~~~ 341 (460)
T PRK11462 263 EVFVAFLTTYCVGNLIGSALAKPLTDW-KCKVTIFWWTNALLAVISLAMFFVPMQASITMFVFIFVIGVLHQLVTPIQWV 341 (460)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHH-hChHHHHHHHHHHHHHHHHHHHHhchhHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 345667788889999999999999999 9999987766555544444433332 2334455556778887777776677
Q ss_pred eeEeeec-------CcchhhHHhHHHHHHHHHHHHHHHH
Q 041759 193 LLTEKVG-------TEWRGLVGILDSFFFTIGTLTLPAI 224 (525)
Q Consensus 193 ~i~~~~~-------~~~r~~~~~~~~~~~~~G~~l~~~l 224 (525)
+++|..+ +++.|...+......-+|..+++.+
T Consensus 342 m~ad~~d~~e~~tG~r~~g~~~a~~~f~~Klg~alg~~i 380 (460)
T PRK11462 342 MMSDTVDYGEWCNGKRLTGISFAGTLFVLKLGLAFGGAL 380 (460)
T ss_pred HHHHhHhhhHHhcCCCchHHHHHHHHHHHHHHHHHHHHH
Confidence 7777665 3333555677677777787777766
No 251
>TIGR00939 2a57 Equilibrative Nucleoside Transporter (ENT).
Probab=98.35 E-value=0.00014 Score=71.90 Aligned_cols=56 Identities=20% Similarity=0.096 Sum_probs=44.1
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHhhhccccCcchhhhhhHHHHHHHHHHHHHHHHHH
Q 041759 419 RMRIGLELASLFSAYIAYTVIFIYAIELFPTCVRNSATSIMRLAIIFAAIFSSVLV 474 (525)
Q Consensus 419 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~r~~~~~~~~~~~~~g~~~~p~i~ 474 (525)
+..++..++.++..|...+....+.++..++++|..+..+....-.+|-.+|..+.
T Consensus 373 ~~~~~~~~l~gltnGy~~s~~m~~~p~~v~~~e~e~aG~~~~~~l~~Gl~~Gs~l~ 428 (437)
T TIGR00939 373 AYFIILMLLFGFSNGYLGSLSMCLAPRQVDPHEREVAGALMVIFLLVGLALGAVLS 428 (437)
T ss_pred HHHHHHHHHHHHhhhHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 35667788888888888888899999999888888887777777777766666553
No 252
>KOG2533 consensus Permease of the major facilitator superfamily [Carbohydrate transport and metabolism]
Probab=98.32 E-value=1.3e-05 Score=80.03 Aligned_cols=149 Identities=14% Similarity=0.128 Sum_probs=112.5
Q ss_pred cccCChhHHHHHHHHHhcccccccCchhHHHHHHHHHhhcChhHHHHHHHHHHHHHHHHHHhccccccchhHHHHHHHHH
Q 041759 349 ENLGFDIYLGVVFNALLEIPNLASTIPSFFLTFFLIQKWNRKSSLLVLFIISGICSIMAVVANDISNAGKRMRIGLELAS 428 (525)
Q Consensus 349 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~d~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 428 (525)
++.+......+.+.++..+ +.+++.+.++.+.||++..+.+....++..+..++-....+ ....++.-++.
T Consensus 74 edl~~~~~~l~~~~t~F~v----~Yii~~~p~~~L~~r~~ls~~l~~~~~~w~~~~~~~~~~~s-----~~~~ialr~ll 144 (495)
T KOG2533|consen 74 EDLKLVGNQLGVLDTVFYV----GYIIGQFPSGLLGDRFPLSKGLSVSGILWGLFGFLTAAVHS-----FPGLIALRFLL 144 (495)
T ss_pred cccchhhhhhhhHHHHHHH----HHHHHHhhHHHHHHhCChHHHHHHHHHHHHHHHHHHHHHhh-----hHHHHHHHHHH
Confidence 3445555555555566666 67799999999999999666655555555444444433333 34778889999
Q ss_pred HHHHHHHHHHHHhhhccccCcchhhhhhHHHHHHHHHHHHHHHHHHhh--------ccCchhHHHHHHHHHHHHHHHH-H
Q 041759 429 LFSAYIAYTVIFIYAIELFPTCVRNSATSIMRLAIIFAAIFSSVLVAA--------GSNNEFVSYGVFGLVIICCGFF-V 499 (525)
Q Consensus 429 ~~~~~~~~~~~~~~~~~~~p~~~r~~~~~~~~~~~~~g~~~~p~i~~~--------~~~~~~~~~~~~~~~~~~~~~~-~ 499 (525)
|++.+..+|....++..-+.++.|+..+|+.+....+|+++++++... ...++.+.|++-+++.++..++ .
T Consensus 145 Gl~es~~wP~~~~~lg~wy~~~e~g~r~~~~~a~~~~g~i~ggliA~g~~~~~~~~~~~gW~~~FiI~G~i~~~~gi~~f 224 (495)
T KOG2533|consen 145 GLFESGGWPGVVAILGNWYGKSERGLRMGIWYASASLGNIFGGLIAYGVFKLNGSGGLAGWRWLFIIEGVITLVLGIVVF 224 (495)
T ss_pred HHHhcccchHHHHHHHhhcChhhhhhhHHHHHHhcchhhHHHHHHHHHhhhhcCCCCcCCceeehhHHHHHHHHHHheEE
Confidence 999999999999999999999999999999999999999999888753 3457889999999888877654 4
Q ss_pred HhccCCC
Q 041759 500 ICLPETR 506 (525)
Q Consensus 500 ~~~~~~~ 506 (525)
+++|+..
T Consensus 225 ~~lp~~P 231 (495)
T KOG2533|consen 225 FFLPDNP 231 (495)
T ss_pred EEecCCh
Confidence 5566543
No 253
>KOG0252 consensus Inorganic phosphate transporter [Inorganic ion transport and metabolism]
Probab=98.31 E-value=2.4e-06 Score=81.24 Aligned_cols=127 Identities=17% Similarity=0.181 Sum_probs=99.8
Q ss_pred HHHhHHhhHhcccccCCchHHHHHHHHHHHHHHHHHHhhhhH----H----HHHHHHHHHhhcccchhhhhheeeEeeec
Q 041759 128 CLLGIVFLATLADSSLGRKNLLFLSCLTMSVATSLTIFSNNL----W----IYSLLRFFSGISRATIGTCTIVLLTEKVG 199 (525)
Q Consensus 128 ~~~~~~~~G~l~dr~~Grk~~~~~~~~~~~i~~~~~~~~~~~----~----~l~~~r~l~G~~~~~~~~~~~~~i~~~~~ 199 (525)
++-|-.+...+.|+ .|||++.+.+.+++.+..+..+...|. . .+.+..++.-+| .......+-+|.+|
T Consensus 361 ~vPGyw~tv~~id~-iGRk~iq~~GF~~~~i~~~~~~~~y~~~~~~~Gf~v~y~l~~ff~NFG---Pn~ttfivpaE~FP 436 (538)
T KOG0252|consen 361 TVPGYWFTVYFIDI-IGRKYIQLMGFFIMTIFFFVIAGPYNQLENTIGFVVLYSLTFFFGNFG---PNATTFIVPAEIFP 436 (538)
T ss_pred cCCceeEEEEEeeh-hhhHHHHHhhHHHHHHHHHHHcCCcccccccCceeehHHHHHHHHhcC---CCceeEEeehhhch
Confidence 33466778889999 999999999999999999998887661 1 222333333333 22344456689999
Q ss_pred CcchhhHHhHHHHHHHHHHHHHHHH-HHhcc-----CCchHHHHHHHHHHHHHHHhHhheeecCCc
Q 041759 200 TEWRGLVGILDSFFFTIGTLTLPAI-AYTNR-----SSSWTIIYLWTSIPTLVYSGLLYIFVSESP 259 (525)
Q Consensus 200 ~~~r~~~~~~~~~~~~~G~~l~~~l-~~~~~-----~~~wr~~f~~~~~~~~~~~~~~~~~lpesp 259 (525)
.+.|+..-++..+..-+|.++|... .+... ..+.|+.|++.+...++.. +..+++|||.
T Consensus 437 arvR~t~hGIsAA~GK~GAivg~~~F~~~t~~~yp~~~g~~~v~~i~~~~~~~gi-~~T~l~pEtk 501 (538)
T KOG0252|consen 437 ARVRSTCHGISAASGKAGAIVGAFGFLYLTDHNYPPNIGVRNVFIILAGCMLLGI-LFTLLIPETK 501 (538)
T ss_pred HHHhhhhhhHHHHhccchHHHHHHHhhHhhhccCCccccchHHHHHHHHHHHHhH-heeEEeeccc
Confidence 9999999999999999999998866 66665 6789999999999999888 8888899985
No 254
>COG2807 CynX Cyanate permease [Inorganic ion transport and metabolism]
Probab=98.25 E-value=1.7e-05 Score=73.51 Aligned_cols=149 Identities=15% Similarity=0.112 Sum_probs=115.1
Q ss_pred ccceeeccccccchhhhhhhHHHHHHHHHHHhHHhhHhcccccCCchHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHH
Q 041759 100 ALTIISEWGLECSSAFIKGLPAASHFTGCLLGIVFLATLADSSLGRKNLLFLSCLTMSVATSLTIFSNNLWIYSLLRFFS 179 (525)
Q Consensus 100 ~~~i~~~~~~~~~s~~~~g~~~s~~~lg~~~~~~~~G~l~dr~~Grk~~~~~~~~~~~i~~~~~~~~~~~~~l~~~r~l~ 179 (525)
+|.+-.|-|+ |..+.|++.+...+..+..++....+++|+-.+|+..+....++.++.+.+.+.+....+.- -++.
T Consensus 231 LP~ili~~G~---sa~~aG~llsl~~l~~~~~~ll~P~la~R~~n~r~~~~~~~~~~l~G~~G~~~~P~~~~~lw-~~ll 306 (395)
T COG2807 231 LPAILIDRGL---SAAEAGSLLSLMQLAQLPTALLIPLLARRSKNQRPLVVLALLLMLVGLVGLLLAPGQLPILW-ALLL 306 (395)
T ss_pred HHHHHHHcCC---CHHHhhhHHHHHHHHHHHHHHHHHHHHHHhcccchHHHHHHHHHHHHHHHHHHhhhhHHHHH-HHHH
Confidence 6889999999 99999999999999999999999999997456788888888888888888878765433333 4999
Q ss_pred hhcccchhhhhheeeEeeecC-cchhhHHhHHHHHHHHHHHHHHHH-HHhcc-CCchHHHHHHHHHHHHHHHhHhh
Q 041759 180 GISRATIGTCTIVLLTEKVGT-EWRGLVGILDSFFFTIGTLTLPAI-AYTNR-SSSWTIIYLWTSIPTLVYSGLLY 252 (525)
Q Consensus 180 G~~~~~~~~~~~~~i~~~~~~-~~r~~~~~~~~~~~~~G~~l~~~l-~~~~~-~~~wr~~f~~~~~~~~~~~~~~~ 252 (525)
|+|.|..++.+...+.+..++ ++-++..++.+....+=..+||.+ |++-+ ..+|+......+...++..+..+
T Consensus 307 G~G~G~~F~laL~li~~rs~~a~~Aa~LSgmaQg~GYllAa~GP~l~G~lhDa~gsw~~~~~~l~~~~i~m~i~Gl 382 (395)
T COG2807 307 GLGQGGAFPLALTLILLRSSDAAIAAALSGMAQGVGYLLAAFGPWLFGFLHDATGSWSAPLVLLALATLLMLIFGL 382 (395)
T ss_pred hCccchHHHHHHHHHHhhcCChHHHHHHHHHhhhhhHHHHhhhhhhHhHHHHhcCChHHHHHHHHHHHHHHHHHHh
Confidence 999999999999999887764 344444555555544445567777 44433 45899998888877777664444
No 255
>PF03209 PUCC: PUCC protein; InterPro: IPR004896 This protein is required for high-level transcription of the PUC operon. It is an integral membrane protein. The family includes other proteins form Rhodobacter eg. bacteriochlorophyll synthase.
Probab=98.23 E-value=0.00013 Score=69.43 Aligned_cols=145 Identities=17% Similarity=0.170 Sum_probs=121.2
Q ss_pred cceeeccccccchhhhhhhHHHHHHHHHHHhHHhhHhcccccCCchHHHHHHHHHHHHHHHHHHhh---hhHHHHHHHHH
Q 041759 101 LTIISEWGLECSSAFIKGLPAASHFTGCLLGIVFLATLADSSLGRKNLLFLSCLTMSVATSLTIFS---NNLWIYSLLRF 177 (525)
Q Consensus 101 ~~i~~~~~~~~~s~~~~g~~~s~~~lg~~~~~~~~G~l~dr~~Grk~~~~~~~~~~~i~~~~~~~~---~~~~~l~~~r~ 177 (525)
|.=.+-||+ +..+..-+...+..|.+++....|++..|+.++|+...+++.+.+++..+..++ .+.+.+...-+
T Consensus 233 Pygg~Vfgm---sv~eTT~Lta~~~~G~L~G~~~~g~~l~~~~~~~~~a~~G~~~~~~~f~lii~a~~~~~~~~~~~~~~ 309 (403)
T PF03209_consen 233 PYGGEVFGM---SVGETTRLTAFWGGGTLLGMLLAGFLLSRRLGKKRTAALGCLLGALAFALIILAGPLGSPWLFRPGVF 309 (403)
T ss_pred CchhHHcCC---CHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCchHHHHHHHHHHHHHHHHHHHHHhcccchHHHHHHH
Confidence 334567899 999999999999999999999999998854888888888888888777665544 67889999999
Q ss_pred HHhhcccchhhhhheeeEeeecCcchhhHHhHHHHHHHHHHHHHHHHHHhc-----------cCCchHHHHHHHHHHHHH
Q 041759 178 FSGISRATIGTCTIVLLTEKVGTEWRGLVGILDSFFFTIGTLTLPAIAYTN-----------RSSSWTIIYLWTSIPTLV 246 (525)
Q Consensus 178 l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~l~~~l~~~~-----------~~~~wr~~f~~~~~~~~~ 246 (525)
+.|++.|.......+...|...+++.|..++.+.....++..++..++..+ ...+|-.+|.+.++..++
T Consensus 310 l~G~g~G~f~vgals~mM~lt~~~~aG~~mG~WGaaQA~A~Glg~~~GG~~~D~~~~~~~~~~~~aY~~VF~lEa~ll~~ 389 (403)
T PF03209_consen 310 LLGLGNGLFTVGALSLMMDLTSAGRAGLFMGAWGAAQAIARGLGTFLGGALRDLVRALFGNSPALAYGVVFALEAVLLLA 389 (403)
T ss_pred HHHHhhhHHHHHHHHHHHhCCCCcchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCcchHHHHHHHHHHHHHHH
Confidence 999999999999999999999999999999999999988888888775432 124577788877777766
Q ss_pred HH
Q 041759 247 YS 248 (525)
Q Consensus 247 ~~ 248 (525)
..
T Consensus 390 a~ 391 (403)
T PF03209_consen 390 AL 391 (403)
T ss_pred HH
Confidence 66
No 256
>PF03219 TLC: TLC ATP/ADP transporter; InterPro: IPR004667 These proteins are members of the ATP:ADP Antiporter (AAA) family, which consists of nucleotide transporters that have 12 GES predicted transmembrane regions. One protein from Rickettsia prowazekii functions to take up ATP from the eukaryotic cell cytoplasm into the bacterium in exchange for ADP. Five AAA family paralogues are encoded within the genome of R. prowazekii. This organism transports UMP and GMP but not CMP, and it seems likely that one or more of the AAA family paralogues are responsible. The genome of Chlamydia trachomatis encodes two AAA family members, Npt1 and Npt2, which catalyse ATP/ADP exchange and GTP, CTP, ATP and UTP uptake probably employing a proton symport mechanism. Two homologous adenylate translocators of Arabidopsis thaliana are postulated to be localized to the intracellular plastid membrane where they function as ATP importers.; GO: 0005471 ATP:ADP antiporter activity, 0005524 ATP binding, 0006810 transport, 0016021 integral to membrane
Probab=98.19 E-value=0.0033 Score=62.85 Aligned_cols=110 Identities=15% Similarity=0.113 Sum_probs=73.7
Q ss_pred hhhhhhHHHHHHH-HHHHhHHhhHhcccccCCchHHHHHHHHHHHHHHHHHHhh---------h----------------
Q 041759 114 AFIKGLPAASHFT-GCLLGIVFLATLADSSLGRKNLLFLSCLTMSVATSLTIFS---------N---------------- 167 (525)
Q Consensus 114 ~~~~g~~~s~~~l-g~~~~~~~~G~l~dr~~Grk~~~~~~~~~~~i~~~~~~~~---------~---------------- 167 (525)
...+..+-....+ +..+......+++++ ++|.+++-+....+.....+.++. +
T Consensus 57 ae~I~flK~~~vlP~a~~f~~~y~kl~n~-~s~~~lFy~~~~~F~~fF~~f~~vlyP~~~~lhp~~~~~~~~~~~~~~~~ 135 (491)
T PF03219_consen 57 AEVIPFLKVWGVLPVAILFTILYSKLSNR-LSREKLFYIIIIPFLGFFALFAFVLYPNRDILHPDAFADKLLAILPPGFK 135 (491)
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHhc-CCHHHHHHHHHHHHHHHHHHHHHHHhhchhhcCCCHHHHHhhhhccchHH
Confidence 3455555554444 445557788999999 999998887776666555555442 0
Q ss_pred ------hHHHHHHHHHHHhhcccchhh-hhheeeEeeecCcchhhHHhHHHHHHHHHHHHHHHH
Q 041759 168 ------NLWIYSLLRFFSGISRATIGT-CTIVLLTEKVGTEWRGLVGILDSFFFTIGTLTLPAI 224 (525)
Q Consensus 168 ------~~~~l~~~r~l~G~~~~~~~~-~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~l~~~l 224 (525)
+.|.+.+..++.-+-...... ....+..|.++.+|-.|..+++..+.++|.+++..+
T Consensus 136 ~~i~~~~~Wt~slfYv~aElwgsvvlSlLFW~fAN~itt~~eAKRfYpl~g~ganigli~sG~~ 199 (491)
T PF03219_consen 136 GFIAMFRNWTFSLFYVMAELWGSVVLSLLFWGFANEITTVEEAKRFYPLFGLGANIGLIFSGQL 199 (491)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 122333333333333333333 456788999999999999999999999999997766
No 257
>PF00083 Sugar_tr: Sugar (and other) transporter; InterPro: IPR005828 Recent genome-sequencing data and a wealth of biochemical and molecular genetic investigations have revealed the occurrence of dozens of families of primary and secondary transporters. Two such families have been found to occur ubiquitously in all classifications of living organisms. These are the ATP-binding cassette (ABC) superfamily and the major facilitator superfamily (MFS), also called the uniporter-symporter-antiporter family. While ABC family permeases are in general multicomponent primary active transporters, capable of transporting both small molecules and macromolecules in response to ATP hydrolysis the MFS transporters are single-polypeptide secondary carriers capable only of transporting small solutes in response to chemiosmotic ion gradients. Although well over 100 families of transporters have now been recognised and classified, the ABC superfamily and MFS account for nearly half of the solute transporters encoded within the genomes of microorganisms. They are also prevalent in higher organisms. The importance of these two families of transport systems to living organisms can therefore not be overestimated []. The MFS was originally believed to function primarily in the uptake of sugars but subsequent studies revealed that drug efflux systems, Krebs cycle metabolites, organophosphate:phosphate exchangers, oligosaccharide:H1 symport permeases, and bacterial aromatic acid permeases were all members of the MFS. These observations led to the probability that the MFS is far more widespread in nature and far more diverse in function than had been thought previously. 17 subgroups of the MFS have been identified []. Evidence suggests that the MFS permeases arose by a tandem intragenic duplication event in the early prokaryotes. This event generated a 2-transmembrane-spanner (TMS) protein topology from a primordial 6-TMS unit. Surprisingly, all currently recognised MFS permeases retain the two six-TMS units within a single polypeptide chain, although in 3 of the 17 MFS families, an additional two TMSs are found []. Moreover, the well-conserved MFS specific motif between TMS2 and TMS3 and the related but less well conserved motif between TMS8 and TMS9 [] prove to be a characteristic of virtually all of the more than 300 MFS proteins identified.; GO: 0022857 transmembrane transporter activity, 0055085 transmembrane transport, 0016021 integral to membrane
Probab=98.11 E-value=5.8e-08 Score=97.97 Aligned_cols=144 Identities=19% Similarity=0.168 Sum_probs=107.6
Q ss_pred HHHHHHHHHhcccccccCchhHHHHHHHHHhhcChhHHHHHHHHHHHHHHHHHHhccccccchhHHHHHHHHHHHHHHHH
Q 041759 356 YLGVVFNALLEIPNLASTIPSFFLTFFLIQKWNRKSSLLVLFIISGICSIMAVVANDISNAGKRMRIGLELASLFSAYIA 435 (525)
Q Consensus 356 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~d~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 435 (525)
.......+...+ +.++|.++.|++.||+|||+.+.++..+..++.++..+.+.. .++....+.-++.|++.+..
T Consensus 46 ~~~~~~~~~~~~----g~~~G~~~~g~~~d~~GRk~~~~~~~~~~~i~~~~~~~~~~~--~~~~~~~~~R~~~G~~~g~~ 119 (451)
T PF00083_consen 46 LLSSLLTSSFFI----GAIVGALIFGFLADRYGRKPALIISALLMIIGSILIAFAPSY--NNFWMLLIGRFLIGFGIGGA 119 (451)
T ss_pred HHHHHHHHHHHh----hhcccccccccccccccccccccccccccccccccccccccc--cccccccccccccccccccc
Confidence 345556666666 888999999999999999999999999999999888887722 12346777888899999999
Q ss_pred HHHHHhhhccccCcchhhhhhHHHHHHHHHHHHHHHHHHhhc----c-CchhHHHHHHHHHHHHHHHHHHhccCC
Q 041759 436 YTVIFIYAIELFPTCVRNSATSIMRLAIIFAAIFSSVLVAAG----S-NNEFVSYGVFGLVIICCGFFVICLPET 505 (525)
Q Consensus 436 ~~~~~~~~~~~~p~~~r~~~~~~~~~~~~~g~~~~p~i~~~~----~-~~~~~~~~~~~~~~~~~~~~~~~~~~~ 505 (525)
.+....++.|..|++.|+...++.+....+|..++..+.... . ..+...+.+.++..++..+..+++||+
T Consensus 120 ~~~~~~~~~E~~~~~~R~~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~Wr~~~~~~~~~~l~~~~~~~~~pES 194 (451)
T PF00083_consen 120 YVVSPIYISEIAPPKHRGFLSSLFQLFWALGILLASLIGYIVSYYSDNWGWRILLIFGAIPSLLVLLLRFFLPES 194 (451)
T ss_pred ccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccc
Confidence 999999999999999999999999888888877776664321 1 123344444444444444445556654
No 258
>PF05978 UNC-93: Ion channel regulatory protein UNC-93; InterPro: IPR010291 The proteins in this family are represented by UNC-93 from Caenorhabditis elegans. UNC-93 colocalizes with SUP-10 and SUP-9 within muscle cells. Genetic studies suggest that these three proteins forms complex that coordinates muscle contraction. The function of UNC-93 is not known but is most likely an ion channel regulatory protein [].
Probab=98.11 E-value=1.8e-05 Score=65.56 Aligned_cols=107 Identities=16% Similarity=0.102 Sum_probs=91.5
Q ss_pred hHHHHHHHHHHHhHHhhHhcccccCCchHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHhhcccchhhhhheeeEeee
Q 041759 119 LPAASHFTGCLLGIVFLATLADSSLGRKNLLFLSCLTMSVATSLTIFSNNLWIYSLLRFFSGISRATIGTCTIVLLTEKV 198 (525)
Q Consensus 119 ~~~s~~~lg~~~~~~~~G~l~dr~~Grk~~~~~~~~~~~i~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~ 198 (525)
.-.++.+....+++++.+.+.++ +|.|+.+++|.+.+.+-.... +-++.+.++.+-++.|++.+..++....++.+..
T Consensus 41 ~slai~Y~~~~~s~l~~P~iv~~-lg~K~sm~lg~~~y~~y~~~~-~~~~~~~l~~~s~l~G~~~a~lW~aqg~ylt~~s 118 (156)
T PF05978_consen 41 YSLAILYGSFAISCLFAPSIVNK-LGPKWSMILGSLGYAIYIASF-FYPNSYTLYPASALLGFGAALLWTAQGTYLTSYS 118 (156)
T ss_pred HHHHHHHHHHHHHHHhHHHHHHH-HhhHHHHHHHHHHHHHHHHHH-HhhhHHHHHHHHHHHhhhhHHhhHhhhHHHHHcC
Confidence 34466667777888888999999 999999999999988655443 4577889999999999999999999999999999
Q ss_pred cCcchhhHHhHHHHHHHHHHHHHHHHHHh
Q 041759 199 GTEWRGLVGILDSFFFTIGTLTLPAIAYT 227 (525)
Q Consensus 199 ~~~~r~~~~~~~~~~~~~G~~l~~~l~~~ 227 (525)
++++|++-.+++......+.++|.++.++
T Consensus 119 ~~~~~~~~~~ifw~i~~~s~i~G~~~~~~ 147 (156)
T PF05978_consen 119 TEETIGRNTGIFWAIFQSSLIFGNLFLFF 147 (156)
T ss_pred CHHHHhhHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999888898888877554
No 259
>KOG3762 consensus Predicted transporter [General function prediction only]
Probab=98.10 E-value=1.9e-06 Score=83.49 Aligned_cols=135 Identities=18% Similarity=0.161 Sum_probs=116.3
Q ss_pred hhhhhhhHHHHHHHHHHHhHHhhHhcccccCCchHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHhhcccchhhhhhe
Q 041759 113 SAFIKGLPAASHFTGCLLGIVFLATLADSSLGRKNLLFLSCLTMSVATSLTIFSNNLWIYSLLRFFSGISRATIGTCTIV 192 (525)
Q Consensus 113 s~~~~g~~~s~~~lg~~~~~~~~G~l~dr~~Grk~~~~~~~~~~~i~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~ 192 (525)
.+...|.....-..|-.+.-++.+++..| +|+-+++.+++.+..+=.+..++.+|.|+.+-.-+++|+..+.++....+
T Consensus 404 ~~~LfGv~~a~~~~gEI~~~ffs~klI~k-iGHv~v~~lgLa~~~~Rf~~~S~L~n~W~vLPieilqgit~aliWaa~~s 482 (618)
T KOG3762|consen 404 IKTLFGVVSALCHAGEILFYFFSFKLIEK-IGHVNVMYLGLACNVGRFLYYSYLQNPWMVLPIEILQGITHALIWAAIIS 482 (618)
T ss_pred cceeeeehhhhhccchHHHHHHHHHHHHH-hcccceeeehhhHHHHHHHHHHHhcCchheeeHHHHHHHHHHHHHHHHHH
Confidence 55556666666667777778889999999 99999999999999999999999999999999999999999999999999
Q ss_pred eeEeeecCcchhhHHhHHHH-HHHHHHHHHHHHH-HhccCCchHHHHHHHHHHHHHHH
Q 041759 193 LLTEKVGTEWRGLVGILDSF-FFTIGTLTLPAIA-YTNRSSSWTIIYLWTSIPTLVYS 248 (525)
Q Consensus 193 ~i~~~~~~~~r~~~~~~~~~-~~~~G~~l~~~l~-~~~~~~~wr~~f~~~~~~~~~~~ 248 (525)
|+++..|++-|..+.++.+. ..++|--+|.++| .....++=|..|.+.++.+++.+
T Consensus 483 Y~s~vaPp~l~at~Q~l~~g~f~GlG~g~GslIGG~~v~~fg~~ttf~~~giAcl~~l 540 (618)
T KOG3762|consen 483 YASHVAPPGLRATAQGLLQGIFHGLGKGLGSLIGGFVVERFGARTTFRIFGIACLVTL 540 (618)
T ss_pred HHHhhCCCcchHHHHHHHHHHhcccCcchhhhhhhhhheeehhHHHHHHHHHHHHHHH
Confidence 99999999999999888765 4477888888884 45567788999988888887766
No 260
>KOG2325 consensus Predicted transporter/transmembrane protein [General function prediction only]
Probab=98.05 E-value=4e-05 Score=75.12 Aligned_cols=155 Identities=12% Similarity=0.055 Sum_probs=105.0
Q ss_pred cccc--cCChhHHHHHHHHHhcccccccCchhHHHHHHHHHhhcC-hhHHHHHHHHHHHHHHHHHHhccccccchhHHHH
Q 041759 347 GIEN--LGFDIYLGVVFNALLEIPNLASTIPSFFLTFFLIQKWNR-KSSLLVLFIISGICSIMAVVANDISNAGKRMRIG 423 (525)
Q Consensus 347 ~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~d~~g~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 423 (525)
++++ .+.+..-.+.+.+...+ +..++.++.++...|.+. |+.++.+.+++.++.+++......++...+++++
T Consensus 60 Yl~~lD~~A~~~ffG~viaa~sl----g~~i~~liF~~Ws~k~~~~k~Pli~s~ii~~~g~llY~~l~~~~~~~~y~mL~ 135 (488)
T KOG2325|consen 60 YLQKLDPTATATFFGLVIAASSL----GHAIFSLIFGIWSNKTGSVKKPLIVSFLIAIIGNLLYLALAYVPNGVKYLMLV 135 (488)
T ss_pred hhhhcCCCCCcchhhHHHHHHHH----HHHhcchhhcccccccCCcccCHHHHHHHHHHHHHHHHHHHhcccchHHHHHH
Confidence 3444 55566667777787777 888999999999999876 8889999999999999885554443323446666
Q ss_pred HHHHHHHHHHHHHHHHHhhhccccCcchhhhhhHHHHHHHHHHHHHHHHHH----hhccC-----------chhHHHHHH
Q 041759 424 LELASLFSAYIAYTVIFIYAIELFPTCVRNSATSIMRLAIIFAAIFSSVLV----AAGSN-----------NEFVSYGVF 488 (525)
Q Consensus 424 ~~~~~~~~~~~~~~~~~~~~~~~~p~~~r~~~~~~~~~~~~~g~~~~p~i~----~~~~~-----------~~~~~~~~~ 488 (525)
.-++.|++.+. ....-.|+++..-.+.|.++++.......+|.++||.+. ++... -+..+-++.
T Consensus 136 ~R~l~Gvg~~n-~a~lR~Y~a~~s~~~dR~rA~a~~~~~~vlg~ilGp~~q~~f~~Lg~~G~~i~~~~~~n~YTap~w~m 214 (488)
T KOG2325|consen 136 ARILTGVGVGN-FAVLRAYIADASTVEDRPRAFAATSGGFVLGIILGPTIQLAFTPLGEKGFMILPGLIFNMYTAPAWLM 214 (488)
T ss_pred HHHHcCcCccc-HHHHHHHHHhccCccchHHHHHHhhhHHHHHHHHhHHHHHHHhhhcCCceEEcCcceEEecchHHHHH
Confidence 77777666444 367778888877667788888877776666666666554 32211 134455666
Q ss_pred HHHHHHHHHH-HHhccCCC
Q 041759 489 GLVIICCGFF-VICLPETR 506 (525)
Q Consensus 489 ~~~~~~~~~~-~~~~~~~~ 506 (525)
+++.++..++ .++++|..
T Consensus 215 ~i~~i~~~v~i~~~f~E~~ 233 (488)
T KOG2325|consen 215 AILWIIYIVIILFFFKEVY 233 (488)
T ss_pred HHHHHHHHHHHHhheeecc
Confidence 6666666554 34455543
No 261
>COG3202 ATP/ADP translocase [Energy production and conversion]
Probab=97.99 E-value=0.0079 Score=58.63 Aligned_cols=127 Identities=12% Similarity=0.022 Sum_probs=87.0
Q ss_pred ccceeeccccccchhhhhhhHHHHHHH-HHHHhHHhhHhcccccCCchHHHHHHHHHHHHHHHHHHhh---------hh-
Q 041759 100 ALTIISEWGLECSSAFIKGLPAASHFT-GCLLGIVFLATLADSSLGRKNLLFLSCLTMSVATSLTIFS---------NN- 168 (525)
Q Consensus 100 ~~~i~~~~~~~~~s~~~~g~~~s~~~l-g~~~~~~~~G~l~dr~~Grk~~~~~~~~~~~i~~~~~~~~---------~~- 168 (525)
+-.+++.+.+....+..+.++-+...+ ++.+..++.+++.++ ..|.+++-+.+..+....+++++. ++
T Consensus 46 lR~lKDslvv~~~gae~I~FlK~~~vlP~avif~~iy~kl~~~-lt~~~vF~~~~~~F~~fF~LFa~Vi~P~~~~~hp~~ 124 (509)
T COG3202 46 LRSLKDSLVVTRQGAESISFLKTWGVLPSAVIFTIIYQKLLNI-LTREKVFYIILGFFLGFFALFAFVIYPYKDILHPDP 124 (509)
T ss_pred HHHhhhheEeecCcchhhHHHHHHHhchHHHHHHHHHHHHHhh-cCHHHHHHHHHHHHHHHHHHHHHHHhccccccCCCH
Confidence 344556665543367778888888888 788889999999999 999999888777777777666653 11
Q ss_pred ----------------------HHHHHHHHHHHhhcccchhh-hhheeeEeeecCcchhhHHhHHHHHHHHHHHHHHHHH
Q 041759 169 ----------------------LWIYSLLRFFSGISRATIGT-CTIVLLTEKVGTEWRGLVGILDSFFFTIGTLTLPAIA 225 (525)
Q Consensus 169 ----------------------~~~l~~~r~l~G~~~~~~~~-~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~l~~~l~ 225 (525)
.|...+..++.=+=...+.. .......|.+..+|-.|..++++.+.+++..++..+.
T Consensus 125 ~~~~~~~~~~p~~l~~~ili~~~Ws~s~~Yi~aELWgslV~S~lFw~faNeitt~~eakRFy~lf~l~~ni~lllsg~~~ 204 (509)
T COG3202 125 EFSRDLFADLPMFLKWFILIVGEWSYSLFYIMAELWGSLVLSLLFWQFANEITTIEEAKRFYPLFGLGANISLLLSGEVT 204 (509)
T ss_pred HHHHHHHhhCCccceeeeEeecchHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHhhhhHHHHHHHHHHHHHHHHHHH
Confidence 12222222222222222222 3345567888888999999999999999999977664
Q ss_pred Hh
Q 041759 226 YT 227 (525)
Q Consensus 226 ~~ 227 (525)
..
T Consensus 205 ~~ 206 (509)
T COG3202 205 SW 206 (509)
T ss_pred HH
Confidence 33
No 262
>PF05631 DUF791: Protein of unknown function (DUF791); InterPro: IPR008509 This family consists of several eukaryotic proteins of unknown function.
Probab=97.89 E-value=0.001 Score=62.41 Aligned_cols=149 Identities=13% Similarity=0.123 Sum_probs=96.5
Q ss_pred cccCChhHHHHHHHHHhcccccccCchhHHHHHHHHHhhcChhHHHHHHHHHHHHHHHHHHhccccccchhHHHHHHHHH
Q 041759 349 ENLGFDIYLGVVFNALLEIPNLASTIPSFFLTFFLIQKWNRKSSLLVLFIISGICSIMAVVANDISNAGKRMRIGLELAS 428 (525)
Q Consensus 349 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~d~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 428 (525)
+++|++..+...+...... .+++...+.|.+.||+|||+..+...++..++++.-.. ++ ...+++.-++.
T Consensus 62 ~~yg~~~~qIa~Lf~~Gf~----Ss~i~g~~~G~laD~~Grk~~cl~~cily~~scl~k~~-~~-----~~~L~~GRvlg 131 (354)
T PF05631_consen 62 ESYGFSEHQIAILFVAGFA----SSAIFGTFVGSLADRYGRKKACLLFCILYSLSCLTKHS-SN-----YPVLLLGRVLG 131 (354)
T ss_pred HHcCCCHHHHHHHHHHHHH----HHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHhc-cc-----cHHHHHHHHHH
Confidence 5688888887777666555 66678888999999999999999999998888864332 22 34677777888
Q ss_pred HHHHHHHHHHHHhhhc-c----ccCcchhhhhhHHHH-HHHHHHHH----HHHHHHhhccCchhHHHHHHHHHHHHHHHH
Q 041759 429 LFSAYIAYTVIFIYAI-E----LFPTCVRNSATSIMR-LAIIFAAI----FSSVLVAAGSNNEFVSYGVFGLVIICCGFF 498 (525)
Q Consensus 429 ~~~~~~~~~~~~~~~~-~----~~p~~~r~~~~~~~~-~~~~~g~~----~~p~i~~~~~~~~~~~~~~~~~~~~~~~~~ 498 (525)
|+.....++..-++.. | -+|++..+...+... ..+.+-++ ++-.+......+...+|.....+.+++.++
T Consensus 132 GiaTSLLfS~FEsW~V~Eh~~~g~~~~~L~~tF~~~tf~~n~~vAI~aGv~a~~l~~~~~~g~vaPF~~a~~~l~~~~~~ 211 (354)
T PF05631_consen 132 GIATSLLFSAFESWMVHEHNKRGFPQEWLSDTFSLATFFGNGVVAIGAGVVANVLADWFGFGPVAPFDAAIVLLAVAAVL 211 (354)
T ss_pred HHHHHHHHHHHHHHHHHHHHHcCCChHHHHHHHHHHHHHHhHHHHHHHhHHHHHHHHHhCCCCcchHHHHHHHHHHHHHH
Confidence 8888887776655543 3 245554455554443 22233333 333333334445677888777777776665
Q ss_pred HHh-ccCCCC
Q 041759 499 VIC-LPETRG 507 (525)
Q Consensus 499 ~~~-~~~~~~ 507 (525)
... .+|+.+
T Consensus 212 I~~~W~ENyg 221 (354)
T PF05631_consen 212 ILKTWPENYG 221 (354)
T ss_pred HHhcccccCC
Confidence 443 355543
No 263
>KOG1237 consensus H+/oligopeptide symporter [Amino acid transport and metabolism]
Probab=97.89 E-value=0.0025 Score=65.11 Aligned_cols=146 Identities=14% Similarity=0.035 Sum_probs=112.5
Q ss_pred ccceeeccccccchhhhhhhHHHHHHHHHHHhHHhhHhcccccCCchHHHHHHHHHHHHHHHHHHhhhh-----------
Q 041759 100 ALTIISEWGLECSSAFIKGLPAASHFTGCLLGIVFLATLADSSLGRKNLLFLSCLTMSVATSLTIFSNN----------- 168 (525)
Q Consensus 100 ~~~i~~~~~~~~~s~~~~g~~~s~~~lg~~~~~~~~G~l~dr~~Grk~~~~~~~~~~~i~~~~~~~~~~----------- 168 (525)
...+..++|. +...+.-..+.+.-...+..+.+++++|-.+||-+++.++.++..+|..+..++..
T Consensus 61 v~ylt~~~~~---~~~~aa~~v~~f~G~~~~~~l~g~~laD~f~gry~tI~~~s~i~~~G~~~lt~~a~~~~l~p~~~~~ 137 (571)
T KOG1237|consen 61 VTYLTLELHA---SGGGAANNVNAFGGTQFLLPLLGAFLADSFLGRYFTINIGSLISLLGLFGLTLSAMIPALLPFMCKF 137 (571)
T ss_pred HHHHHHHhcc---chHHHHHHHHHHhhHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCccccC
Confidence 4455667777 66777778888888888888999999998679999999999998888665544321
Q ss_pred --------------HHHHHHHHHHHhhcccchhhhhheeeEeeec---Cc---chhhHHhHHHHHHHHHHHHHHHH-HHh
Q 041759 169 --------------LWIYSLLRFFSGISRATIGTCTIVLLTEKVG---TE---WRGLVGILDSFFFTIGTLTLPAI-AYT 227 (525)
Q Consensus 169 --------------~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~---~~---~r~~~~~~~~~~~~~G~~l~~~l-~~~ 227 (525)
...+..+.-+..+|.|+.-+...++-+|-++ ++ .+...+.++....++|..++..+ .+.
T Consensus 138 ~~~~~~c~~~s~~q~~~~~~~l~lia~G~gg~r~~~~~fGadQfd~~~~~~~~~~~~fFnW~yf~~~~g~l~a~t~~vyi 217 (571)
T KOG1237|consen 138 KPGGNVCESPSKLQLAVLYGALYLIALGAGGIRPCLLAFGADQFDELDPVEVKGIPSFFNWFYFSQNGGALLAQTVLVYI 217 (571)
T ss_pred CCCCCcccCcchHHHHHHHHHHHHheeccCCCCCcchhhcccccCccCcchhhCcccchhHHHHHHHHHHHHHHHHHHhh
Confidence 1256667778888999999999999999887 22 22356788888999999998777 444
Q ss_pred ccCCchHHHHHHHHHHHHHHH
Q 041759 228 NRSSSWTIIYLWTSIPTLVYS 248 (525)
Q Consensus 228 ~~~~~wr~~f~~~~~~~~~~~ 248 (525)
-++.+|.+-|.+..+..++..
T Consensus 218 q~~~~w~lgf~i~~~~~~lai 238 (571)
T KOG1237|consen 218 QDNVGWKLGFGIPTVLNALAI 238 (571)
T ss_pred hhcccceeeccHHHHHHHHHH
Confidence 467899999988877776665
No 264
>KOG1479 consensus Nucleoside transporter [Nucleotide transport and metabolism]
Probab=97.67 E-value=0.0031 Score=60.34 Aligned_cols=55 Identities=18% Similarity=0.121 Sum_probs=38.9
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHhhhccccCcchhhhhhHHHHHHHHHHHHHHHHH
Q 041759 419 RMRIGLELASLFSAYIAYTVIFIYAIELFPTCVRNSATSIMRLAIIFAAIFSSVL 473 (525)
Q Consensus 419 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~r~~~~~~~~~~~~~g~~~~p~i 473 (525)
++.++...+.++..|-..+....++++-+|++.+..+..+....-..|-..|..+
T Consensus 344 ~~~~~l~~~lglsnGYltsl~m~~aPk~v~~~e~e~aG~~m~~fl~~Gl~~G~~~ 398 (406)
T KOG1479|consen 344 GWFIFLMSLLGLSNGYLTSLIMMYAPKQVKPSEKEAAGNLMVFFLVGGLALGSLL 398 (406)
T ss_pred hHHHHHHHHHHhccchHhhheehhcCCCCChHHHHHHHHHHHHHHHHHHHHhhHH
Confidence 3667778888888888888889999999988876665555555445554444443
No 265
>PF12832 MFS_1_like: MFS_1 like family
Probab=97.57 E-value=0.00027 Score=50.91 Aligned_cols=53 Identities=25% Similarity=0.298 Sum_probs=47.0
Q ss_pred ccceeeccccccchhhhhhhHHHHHHHHHHHhHHhhHhcccccCCchHHHHHHHHHH
Q 041759 100 ALTIISEWGLECSSAFIKGLPAASHFTGCLLGIVFLATLADSSLGRKNLLFLSCLTM 156 (525)
Q Consensus 100 ~~~i~~~~~~~~~s~~~~g~~~s~~~lg~~~~~~~~G~l~dr~~Grk~~~~~~~~~~ 156 (525)
+|...++.|+ +..++|.+.++..+...++.+++|.++|| +|+++.++....+.
T Consensus 23 l~~~~~~~Gl---~~~~iGil~~i~~~~~~~~~pl~g~laDk-~~~~~~~l~~~~~~ 75 (77)
T PF12832_consen 23 LPLYLKQLGL---SPSQIGILSAIRPLIRFLAPPLWGFLADK-FGKRKVILLGSLFM 75 (77)
T ss_pred hhHhhhhcCC---CHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HCccHHHHHHHHHH
Confidence 6677778999 99999999999999999999999999999 99988777665543
No 266
>TIGR00926 2A1704 Peptide:H+ symporter (also transports b-lactam antibiotics, the antitumor agent, bestatin, and various protease inhibitors).
Probab=97.51 E-value=0.0015 Score=68.11 Aligned_cols=148 Identities=11% Similarity=0.077 Sum_probs=97.8
Q ss_pred ccCChhHHHHHHHHHhcccccccCchhHHHHHHHHHh-hcChhHHHHHHHHHHHHHHHHHHhccccc---cchhHHHHHH
Q 041759 350 NLGFDIYLGVVFNALLEIPNLASTIPSFFLTFFLIQK-WNRKSSLLVLFIISGICSIMAVVANDISN---AGKRMRIGLE 425 (525)
Q Consensus 350 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~d~-~g~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~ 425 (525)
.++.+...+..+...... ..-+..++++++.|+ +|+++.+.++.++..++.+++.+...... ......++.+
T Consensus 17 ~lg~~~~~A~~i~~~f~~----l~yl~pilGg~iAD~~lG~~~tIl~~~ii~~lG~~llai~a~~~~~~~~~~~~~l~gL 92 (654)
T TIGR00926 17 FLGFSESTSTVLFHTFTY----LCYLTPLIGAIIADGWLGKFKTILYLSIVYVVGHALLSFGAIPSSGHPLHDLLDLLGL 92 (654)
T ss_pred HcCCcHHHHHHHHHHHHH----HHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHhccCcccccchHHHHHHHHH
Confidence 356665555544444333 233566788889988 59999999999998888887766432210 1122345556
Q ss_pred HHHHHHHHHHHHHHHhhhccccCcc---hhhhhhHHHHHHHHHHHHHHHHHHhhcc---------CchhHHHHHHHHHHH
Q 041759 426 LASLFSAYIAYTVIFIYAIELFPTC---VRNSATSIMRLAIIFAAIFSSVLVAAGS---------NNEFVSYGVFGLVII 493 (525)
Q Consensus 426 ~~~~~~~~~~~~~~~~~~~~~~p~~---~r~~~~~~~~~~~~~g~~~~p~i~~~~~---------~~~~~~~~~~~~~~~ 493 (525)
.+...+.++.-+...+...|.++++ .+.....+.....++|+++++.+.++.. .++...|.+.+++.+
T Consensus 93 aLia~G~GgiKp~vsaf~gdqf~~~~~~~~~s~F~~fY~~iNiGSlis~~i~~~l~~~~~~fg~~~~~~~aF~i~~i~m~ 172 (654)
T TIGR00926 93 ALIALGTGGIKPCVSAFGGDQFEERQLSLRSRFFSFFYFAINAGSLISTIITPILRGDVGCFGCQDCYPLAFGVPAILMI 172 (654)
T ss_pred HHHHhhccccccCchhhhHhhcCccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcccccCcchHHHHHHHHHHHH
Confidence 6666777777788888888888653 3567777778888999998888876422 135667777777776
Q ss_pred HHHHHHHh
Q 041759 494 CCGFFVIC 501 (525)
Q Consensus 494 ~~~~~~~~ 501 (525)
++.++...
T Consensus 173 ia~lvf~~ 180 (654)
T TIGR00926 173 LALIVFMA 180 (654)
T ss_pred HHHHHHHH
Confidence 66655443
No 267
>TIGR00769 AAA ADP/ATP carrier protein family. These proteins are members of the ATP:ADP Antiporter (AAA) Family (TC 2.A.12), which consists of nucleotide transporters that have 12 GES predicted transmembrane regions. One protein from Rickettsia prowazekii functions to take up ATP from the eukaryotic cell cytoplasm into the bacterium in exchange for ADP. Five AAA family paralogues are encoded within the genome of R. prowazekii. This organism transports UMP and GMP but not CMP, and it seems likely that one or more of the AAA family paralogues are responsible. The genome of Chlamydia trachomatis encodes two AAA family members, Npt1 and Npt2, which catalyse ATP/ADP exchange and GTP, CTP, ATP and UTP uptake probably employing a proton symport mechanism. Two homologous adenylate translocators of Arabidopsis thaliana are postulated to be localized to the intracellular plastid membrane where they function as ATP importers.
Probab=97.41 E-value=0.021 Score=56.86 Aligned_cols=148 Identities=9% Similarity=-0.020 Sum_probs=89.7
Q ss_pred HHHHHHHHHHHHHHHHHhhhhhcccccCC-----hhHHHHHHHHHhcccccccCchhHHHHHHHHHhhcChhHHHHHHHH
Q 041759 325 ERTLALMVPGFGIGVVYYGMTLGIENLGF-----DIYLGVVFNALLEIPNLASTIPSFFLTFFLIQKWNRKSSLLVLFII 399 (525)
Q Consensus 325 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~d~~g~~~~~~~~~~~ 399 (525)
+.++......++..+.|+.+-..-+.+.. +......+-....+| ..++..++.+++++|++|++++.+....
T Consensus 7 ~k~~~~~l~fF~il~~Y~iLR~lKD~lvv~~~~~gae~i~fLk~~~~lp---~~~~~~~ly~~l~~~~~~~~lf~~~~~~ 83 (472)
T TIGR00769 7 KKFLPLFLMFFCILFNYTILRDTKDTLVVTAKGSGAEIIPFLKTWVVVP---MAVIFMLIYTKLSNILSKEALFYTVISP 83 (472)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhhhhheeecccCCchhhHHHHHHHHHHH---HHHHHHHHHHHHHhcCCHHHhHHHHHHH
Confidence 34455556666666777776555544433 223333333222221 1113367789999999999988776666
Q ss_pred HHHHHHHHHHh--ccccc-------------------------cchhHHHHHHHHHHHHHHHHHH-HHHhhhccccCcch
Q 041759 400 SGICSIMAVVA--NDISN-------------------------AGKRMRIGLELASLFSAYIAYT-VIFIYAIELFPTCV 451 (525)
Q Consensus 400 ~~~~~~~~~~~--~~~~~-------------------------~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~p~~~ 451 (525)
....++++.+. +.... .+| ...+..+..-.......+ +.|.+++|.+..++
T Consensus 84 F~~~f~lF~~vl~p~~~~~~p~~~~~~~~~~~~~~~~~~i~~~~~W-~~~~FYv~~elw~~~vvS~lFW~fandi~t~~q 162 (472)
T TIGR00769 84 FLGFFALFAFVIYPLSDLLHPTALADKLLSLLPPGFMGFIAILRIW-SFALFYVMAELWGSVVLSLLFWGFANQITTIDE 162 (472)
T ss_pred HHHHHHHHHHHHhcchhhcCCcHHHHHHHhhcchhhHHHHHHHhhh-hHHHHHHHHHHHHHHHHHHHHHHHHHhcCCHHH
Confidence 55555554443 11100 012 122223333333344444 78999999999999
Q ss_pred hhhhhHHHHHHHHHHHHHHHHHHhh
Q 041759 452 RNSATSIMRLAIIFAAIFSSVLVAA 476 (525)
Q Consensus 452 r~~~~~~~~~~~~~g~~~~p~i~~~ 476 (525)
..+-.++....+++|.+++|.+...
T Consensus 163 akRfy~l~~~ganlg~i~sg~~~~~ 187 (472)
T TIGR00769 163 AKRFYALFGLGANVALIFSGRTIKY 187 (472)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999987763
No 268
>PF05978 UNC-93: Ion channel regulatory protein UNC-93; InterPro: IPR010291 The proteins in this family are represented by UNC-93 from Caenorhabditis elegans. UNC-93 colocalizes with SUP-10 and SUP-9 within muscle cells. Genetic studies suggest that these three proteins forms complex that coordinates muscle contraction. The function of UNC-93 is not known but is most likely an ion channel regulatory protein [].
Probab=97.40 E-value=0.0052 Score=51.06 Aligned_cols=95 Identities=14% Similarity=0.035 Sum_probs=77.9
Q ss_pred hhHHHHHHHHHhhcChhHHHHHHHHHHHHHHHHHHhccccccchhHHHHHHHHHHHHHHHHHHHHHhhhccccCcchhhh
Q 041759 375 PSFFLTFFLIQKWNRKSSLLVLFIISGICSIMAVVANDISNAGKRMRIGLELASLFSAYIAYTVIFIYAIELFPTCVRNS 454 (525)
Q Consensus 375 ~~~~~~~~l~d~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~r~~ 454 (525)
++.++.+.+.+++|.|+.++++.+...+-....... + ++..+....+.|++.+..|...-.++.+...++.+++
T Consensus 52 ~s~l~~P~iv~~lg~K~sm~lg~~~y~~y~~~~~~~-~-----~~~l~~~s~l~G~~~a~lW~aqg~ylt~~s~~~~~~~ 125 (156)
T PF05978_consen 52 ISCLFAPSIVNKLGPKWSMILGSLGYAIYIASFFYP-N-----SYTLYPASALLGFGAALLWTAQGTYLTSYSTEETIGR 125 (156)
T ss_pred HHHHhHHHHHHHHhhHHHHHHHHHHHHHHHHHHHhh-h-----HHHHHHHHHHHhhhhHHhhHhhhHHHHHcCCHHHHhh
Confidence 677888999999999999999998888666554432 2 3477888889999999999999999999999999999
Q ss_pred hhHHHHHHHHHHHHHHHHHHh
Q 041759 455 ATSIMRLAIIFAAIFSSVLVA 475 (525)
Q Consensus 455 ~~~~~~~~~~~g~~~~p~i~~ 475 (525)
..++...+...+.++|.++.-
T Consensus 126 ~~~ifw~i~~~s~i~G~~~~~ 146 (156)
T PF05978_consen 126 NTGIFWAIFQSSLIFGNLFLF 146 (156)
T ss_pred HHHHHHHHHHHHHHHHHHHHH
Confidence 999888888777777766543
No 269
>KOG2816 consensus Predicted transporter ADD1 (major facilitator superfamily) [General function prediction only]
Probab=97.37 E-value=0.0034 Score=62.41 Aligned_cols=120 Identities=17% Similarity=0.119 Sum_probs=106.5
Q ss_pred ccceeeccccccchhhhhhhHHHHHHHHHHHhHHhhH-hcccccCCchHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHH
Q 041759 100 ALTIISEWGLECSSAFIKGLPAASHFTGCLLGIVFLA-TLADSSLGRKNLLFLSCLTMSVATSLTIFSNNLWIYSLLRFF 178 (525)
Q Consensus 100 ~~~i~~~~~~~~~s~~~~g~~~s~~~lg~~~~~~~~G-~l~dr~~Grk~~~~~~~~~~~i~~~~~~~~~~~~~l~~~r~l 178 (525)
.-.++..|++ ++.+.+...+.......+++++.. .+... +|-|+++.+|++...+..++.+++++.|+++....+
T Consensus 265 ~~yl~~~f~w---~~~~~s~~~~~~~~~~~i~~l~~~~~l~~~-l~~~~~i~lGl~~~~~~~~~~af~~~~w~~~~~~v~ 340 (463)
T KOG2816|consen 265 LLYLKAKFGW---NKKEFSDLLSLVSILGIISQLLLLPLLSSI-LGEKRLISLGLLSEFLQLLLFAFATETWMMFAAGVV 340 (463)
T ss_pred EEEEeeecCc---CHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HhhhhHhhHHHHHHHHHHHHHHHhccchhhhHHHHH
Confidence 3466778899 999999888888888888888877 66666 999999999999999999999999999999999988
Q ss_pred HhhcccchhhhhheeeEeeecCcchhhHHhHHHHHHHHHHHHHHHH
Q 041759 179 SGISRATIGTCTIVLLTEKVGTEWRGLVGILDSFFFTIGTLTLPAI 224 (525)
Q Consensus 179 ~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~l~~~l 224 (525)
.++... ..|...+.++.+.+++++|++.++......+..+++|.+
T Consensus 341 ~~~~~~-~~pa~~s~~s~~v~~~e~g~v~~~is~i~~l~~~~~~~~ 385 (463)
T KOG2816|consen 341 VALAGI-VFPAIRAFASILVSPEEQGKVFGIISGIEGLSGVVSPAL 385 (463)
T ss_pred HHhhcc-hhHHHHhHHHhhcccccccchhhHHHHHHHHhhhhhHHH
Confidence 887755 678888999999999999999999999999999998877
No 270
>KOG2563 consensus Permease of the major facilitator superfamily [General function prediction only]
Probab=97.30 E-value=0.0052 Score=59.18 Aligned_cols=102 Identities=15% Similarity=0.139 Sum_probs=64.7
Q ss_pred cCchhHHHHHHHHHhhcChhHHHHHHHHHHHHHHHHHHhccccc-cchh--HHHHHHHHHHHHHHHHHHHHHhhhccccC
Q 041759 372 STIPSFFLTFFLIQKWNRKSSLLVLFIISGICSIMAVVANDISN-AGKR--MRIGLELASLFSAYIAYTVIFIYAIELFP 448 (525)
Q Consensus 372 ~~~~~~~~~~~l~d~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~p 448 (525)
..++..+.+-|+.||+|.|....++..+.+++..+=.......- .... +......+.+........+..-+..--+|
T Consensus 91 v~vp~gf~~mw~ldk~GLR~a~llgt~ln~iGa~Ir~iss~p~v~~~f~~~l~~~Gq~iaa~Aq~Fim~lPskiA~~WF~ 170 (480)
T KOG2563|consen 91 VSVPFGFAAMWILDKFGLRTALLLGTVLNGIGAWIRLISSLPFVPPLFRRPLTHTGQSIAAAAQPFILGLPSKIAAVWFP 170 (480)
T ss_pred HHHHHhhHHHHhhcccchHHHHHHHHHHHHHHHHHhhhccCccccccchhhhhHHhHHHHHHhhhHhhccccHHHHhhCC
Confidence 44488888999999999999999999999998877665533311 1111 22223333333222222222233444589
Q ss_pred cchhhhhhHHHHHHHHHHHHHHHHH
Q 041759 449 TCVRNSATSIMRLAIIFAAIFSSVL 473 (525)
Q Consensus 449 ~~~r~~~~~~~~~~~~~g~~~~p~i 473 (525)
+++|+++..+..+.+.+|..++-++
T Consensus 171 ~~qra~A~~~~v~~n~LGvavg~ll 195 (480)
T KOG2563|consen 171 PDQRAIATVLGVMGNPLGVAVGFLL 195 (480)
T ss_pred cchhhhhhhHHHhcchHHHHHHhhc
Confidence 9999999998888876766655433
No 271
>PF03092 BT1: BT1 family; InterPro: IPR004324 Members of this family are transmembrane proteins. Several are Leishmania putative proteins that are thought to be pteridine transporters [, ]. This family also contains five putative Arabidopsis thaliana proteins of unknown function as well as two predicted prokaryotic proteins (from the cyanobacteria Synechocystis and Synechococcus).
Probab=97.28 E-value=0.0058 Score=60.93 Aligned_cols=154 Identities=13% Similarity=0.114 Sum_probs=101.6
Q ss_pred hhcccccCChhHHHHHHHHHhcccccccCchhHHHHHHHHHhh-----cChhHHHHHHHHHHHHHHHHHHhccccccchh
Q 041759 345 TLGIENLGFDIYLGVVFNALLEIPNLASTIPSFFLTFFLIQKW-----NRKSSLLVLFIISGICSIMAVVANDISNAGKR 419 (525)
Q Consensus 345 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~d~~-----g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 419 (525)
+++.+++|.++.+...+.++..+|- ...++.|.++|.+ .||.-++++.++..++.+.+...+.. ..+..
T Consensus 14 ~~l~~~l~ls~~~~~~~~~~~~lPw-----~~Kp~~g~lsD~~pi~G~rr~~Y~~i~~~~~~~~~~~~~~~~~~-~~s~~ 87 (433)
T PF03092_consen 14 PFLKDDLGLSPAQLQRLSSLASLPW-----SIKPLYGLLSDSFPIFGYRRKPYMIIGWLLGAVSALVLALLPAS-ESSAA 87 (433)
T ss_pred HHHHHHcCCCHHHHHHHHHHHhCch-----HHhhhHHhhcccccccCCcchHHHHHHHHHHHHHHHHHHhcccc-cchhh
Confidence 4555668999888887777776622 3567889999987 35556666777776666666665542 11233
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhhccccCcc--hhhhhhHHHHHHHHHHHHHHHHHHhh--ccCchhHHHHHHHHHHHHH
Q 041759 420 MRIGLELASLFSAYIAYTVIFIYAIELFPTC--VRNSATSIMRLAIIFAAIFSSVLVAA--GSNNEFVSYGVFGLVIICC 495 (525)
Q Consensus 420 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~--~r~~~~~~~~~~~~~g~~~~p~i~~~--~~~~~~~~~~~~~~~~~~~ 495 (525)
...++.++..++........-++..|....+ .++...+.......+|++++..+.|. ...+....|.+.+.+..+.
T Consensus 88 ~~~~~l~la~~g~a~~DV~aDa~vvE~~~~~p~~~g~lqS~~~~~~~~G~lv~~~l~G~l~~~~~~~~~f~i~~~~~~l~ 167 (433)
T PF03092_consen 88 IAVVLLFLASFGYAFADVAADALVVELARREPESRGDLQSFVWGVRSVGSLVGSLLSGPLLDSFGPQGVFLISAALPLLM 167 (433)
T ss_pred hHHHHHHHHHHHHHHHHHhhhHHHHHHhhcCCchhHHHHHHHHHHHHHHHHHHHHhhhhhhhcCCCeEEehHHHHHHHHH
Confidence 4455666666777777777777888876322 26777888888889999999888874 3344556666666666555
Q ss_pred HHHHHh-ccC
Q 041759 496 GFFVIC-LPE 504 (525)
Q Consensus 496 ~~~~~~-~~~ 504 (525)
.+..++ .+|
T Consensus 168 ~~~~~~~~~e 177 (433)
T PF03092_consen 168 LIVALFLLEE 177 (433)
T ss_pred HHHHHHhhhh
Confidence 544433 444
No 272
>PF12832 MFS_1_like: MFS_1 like family
Probab=97.22 E-value=0.0017 Score=46.77 Aligned_cols=65 Identities=17% Similarity=0.160 Sum_probs=52.4
Q ss_pred HHHHHHHHHHhhhhhcccccCChhHHHHHHHHHhcccccccCchhHHHHHHHHHhhcChhHHHHHHHHH
Q 041759 332 VPGFGIGVVYYGMTLGIENLGFDIYLGVVFNALLEIPNLASTIPSFFLTFFLIQKWNRKSSLLVLFIIS 400 (525)
Q Consensus 332 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~d~~g~~~~~~~~~~~~ 400 (525)
+...+.+..+-+++.+.++.|.+..+.+.+.++..+ ..+++.++.|+++||.++++.......++
T Consensus 11 ~~f~~~g~~~Pfl~~~~~~~Gl~~~~iGil~~i~~~----~~~~~~pl~g~laDk~~~~~~~l~~~~~~ 75 (77)
T PF12832_consen 11 FYFAALGCLYPFLPLYLKQLGLSPSQIGILSAIRPL----IRFLAPPLWGFLADKFGKRKVILLGSLFM 75 (77)
T ss_pred HHHHHHHHHHhhhhHhhhhcCCCHHHHHHHHHHHHH----HHHHHHHHHHHHHHHHCccHHHHHHHHHH
Confidence 334445555666788899999999999999998888 78899999999999999988777665543
No 273
>KOG3880 consensus Predicted small molecule transporter involved in cellular pH homeostasis (Batten disease protein in human) [General function prediction only]
Probab=97.11 E-value=0.0024 Score=57.92 Aligned_cols=134 Identities=15% Similarity=0.033 Sum_probs=86.8
Q ss_pred hhHHHHHHHHHHHhHHhhHhcccc-cCCchHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHhhcccchhhhhheeeEe
Q 041759 118 GLPAASHFTGCLLGIVFLATLADS-SLGRKNLLFLSCLTMSVATSLTIFSNNLWIYSLLRFFSGISRATIGTCTIVLLTE 196 (525)
Q Consensus 118 g~~~s~~~lg~~~~~~~~G~l~dr-~~Grk~~~~~~~~~~~i~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~ 196 (525)
|.+.-+-.+-.++..+.+..+.|| +||.|. .+..++.+.+.++.+++++.++-+.+-.+..++.|.......++-+.
T Consensus 65 g~VLLaDilPsL~iKl~~Pff~~rfpf~~Ri--~~~v~~sa~s~~lVafs~s~~~sL~GV~~aSissGlGEiTFL~lss~ 142 (409)
T KOG3880|consen 65 GAVLLADILPSLAIKLTAPFFIHRFPFGFRI--ALVVLLSALSFFLVAFSNSVPMSLLGVVFASISSGLGEITFLALSSR 142 (409)
T ss_pred chhhhhhhhHHHHHHHhchhhhhhcccchHH--HHHHHHHhcceEEEEeccchhHHHhhhhhhhhcCCcceeehhhhhcc
Confidence 444444555566666777778888 345554 44556677888889999999999999999999888766655554332
Q ss_pred eecCcchhhHHhHHHHHHHHHHHHHHHH-HHhcc--CCchHHHHHHHHHHHHHHHhHhheeecCC
Q 041759 197 KVGTEWRGLVGILDSFFFTIGTLTLPAI-AYTNR--SSSWTIIYLWTSIPTLVYSGLLYIFVSES 258 (525)
Q Consensus 197 ~~~~~~r~~~~~~~~~~~~~G~~l~~~l-~~~~~--~~~wr~~f~~~~~~~~~~~~~~~~~lpes 258 (525)
+.....+.++.+.+.+.++|..- +.+.+ +.+-|...++...+.++.++..++.++++
T Consensus 143 -----Y~~~~i~~WSSGTGgAGliGa~SYa~lT~~~~~spk~Tlli~l~lP~lfa~~yf~lL~~p 202 (409)
T KOG3880|consen 143 -----YPSIVIAGWSSGTGGAGLIGASSYAFLTSWANLSPKSTLLIMLFLPALFAFAYFFLLKSP 202 (409)
T ss_pred -----CCCceeccccCCCCcchhhhhhHHHHHhhhcCCChhhHHHHHHHHHHHHHHHHHheeCCC
Confidence 33345556666666666666654 22322 45677777777777766663555555443
No 274
>PF00854 PTR2: POT family; InterPro: IPR000109 This entry represents the POT (proton-dependent oligopeptide transport) family, which all appear to be proton dependent transporters. The transport of peptides into cells is a well-documented biological phenomenon which is accomplished by specific, energy-dependent transporters found in a number of organisms as diverse as bacteria and humans. The POT family of proteins is distinct from the ABC-type peptide transporters and was uncovered by sequence analyses of a number of recently discovered peptide transport proteins []. These proteins that seem to be mainly involved in the intake of small peptides with the concomitant uptake of a proton []. These integral membrane proteins are predicted to comprise twelve transmembrane regions.; GO: 0005215 transporter activity, 0006857 oligopeptide transport, 0016020 membrane; PDB: 4APS_A 2XUT_C.
Probab=97.06 E-value=0.0015 Score=64.06 Aligned_cols=105 Identities=13% Similarity=0.168 Sum_probs=84.9
Q ss_pred HHHHHHHHHHHHHHHHHHhhh---h------HHHHHHHHHHHhhcccchhhhhheeeEeeecCc---chhhHHhHHHHHH
Q 041759 147 NLLFLSCLTMSVATSLTIFSN---N------LWIYSLLRFFSGISRATIGTCTIVLLTEKVGTE---WRGLVGILDSFFF 214 (525)
Q Consensus 147 ~~~~~~~~~~~i~~~~~~~~~---~------~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~---~r~~~~~~~~~~~ 214 (525)
|++.++.++..+|.++..++. + .+.++++.++.++|.|+.-|...++++|-++++ +|.+.+.++..+.
T Consensus 2 ktI~~g~~~~~~G~~ll~l~~~~~~~~~~~~~~~~~~gL~lia~G~G~~K~ni~~~~~dq~~~~~~~~~~~~F~~fY~~i 81 (372)
T PF00854_consen 2 KTILLGSIVYLLGHVLLTLSAIPPSLPSGIQLGLFYIGLALIAVGTGGIKPNISPFGADQYDEDDDSRRDSFFNWFYWGI 81 (372)
T ss_dssp HHHHHHHHHHHHHHHH--HHHTSSSC------CHHHHHHHHHHHHHHCCHHHHHHHHHHCSSTTTTTHHHHHHHHHHHHH
T ss_pred HhhhHHHHHHHHHHHHhHHHHhcchhhhhHHHHHHHHHHHHHHhccccccccHHHHHHHHhcccchhhhhhhHHHHHHHH
Confidence 577888999999988855432 2 367899999999999999999999999998765 5667788999999
Q ss_pred HHHHHHHHHH-HHhccCCchHHHHHHHHHHHHHHHhHh
Q 041759 215 TIGTLTLPAI-AYTNRSSSWTIIYLWTSIPTLVYSGLL 251 (525)
Q Consensus 215 ~~G~~l~~~l-~~~~~~~~wr~~f~~~~~~~~~~~~~~ 251 (525)
++|..+++.+ +++-++.+|.+.|.+.++..++..+..
T Consensus 82 n~G~~~~~~~~~~i~~~~~~~~~f~i~~~~~~~~~~~f 119 (372)
T PF00854_consen 82 NIGSLFSPTLVPYIQQNYGWFLGFGIPAIGMLLALIVF 119 (372)
T ss_dssp HHHHHHHHHCCCHHHHCS-HHHHHHHHHHHHHHHHHHH
T ss_pred hhhhHhhcccchhhccccchhhhhhHHHHHHHHHHHHH
Confidence 9999999877 666678899999999998888776333
No 275
>PF02487 CLN3: CLN3 protein; InterPro: IPR003492 Batten's disease, the juvenile variant of neuronal ceroid lipofuscionosis (NCL), is a recessively inherited disorder affecting children of 5-10 years of age. The disease is characterised by progressive loss of vision, seizures and psychomotor disturbances. Biochemically, the disease is characterised by lysosomal accumulation of hydrophobic material, mainly ATP synthase subunit C, largely in the brain but also in other tissues. The disease is fatal within a decade []. Mutations in the CLN3 gene are believed to cause Batten's disease []. The CLN3 gene, with a predicted 438-residue product, maps to chromosome p16p12.1. The gene contains at least 15 exons spanning 15kb and is highly conserved in mammals []. A 1.02kb deletion in the CLN3 gene, occurring in either one or both alleles, is found in 85% of Batten disease chromosomes causing a frameshift generating a predicted translated product of 181 amino acid residues [, ]. 22 other mutations, including deletions, insertions and point mutations, have been reported. It has been suggested that such mutations result in severely truncated CLN3 proteins, or affect its structure/conformation [, ]. CLN3 proteins, which are believed to associate in complexes, are heavily glycosylated lysosomal membrane proteins [], containing complex Asn-linked oligosaccharides []. Extensive glycosylation is important for the stability of these lysosomal proteins in the highly hydrolytic lysosomal lumen. Lysosomal sequestration of active lysosomal enzymes, transport of degraded molecules from the lysosomes, and fusion and fission between lysosomes and other organelles. The CLN3 protein is a 43kDa, highly hydrophobic, multi-transmembrane (TM), phosphorylated protein []. Hydrophobicity analysis predicts 6-9 TM segments, suggesting that CLN3 is a TM protein that may function as a chaperone or signal transducer. The majority of putative phosphorylation sites are found in the N-terminal domain, encompassing 150 residues []. Phosphorylation is believed to be important for membrane compartment interaction, in the formation of functional complexes, and in regulation and interactions with other proteins []. CLN3 contains several motifs that may undergo lipid post-translational modifications (PTMs). PTMs contribute to targeting and anchoring of modified proteins to distinct biological membranes []. There are three general classes of lipid modification: N-terminal myristoylation, C-terminal prenylation, and palmitoylation of cysteine residues. Such modifications are believed to be a common form of PTM occurring in 0.5% of all cellular proteins, including brain tissue []. The C terminus of the CLN3 contains various lipid modification sites: C435, target for prenylation; G419, target for myristoylation; and C414, target for palmitoylation []. Prenylation results in protein hydrophobicity, influences interaction with upstream regulatory proteins and downstream effectors, facilitates protein-protein interaction (multisubunit assembly) and promotes anchoring to membrane lipids. The prenylation motif, Cys-A-A-X, is highly conserved within CLN3 protein sequences of different species []. Species with known CLN3 protein homologues include: Homo sapiens, Canis familiaris, Mus musculus, Saccharomyces cerevisiae and Drosophila melanogaster.; GO: 0016020 membrane
Probab=96.90 E-value=0.025 Score=54.77 Aligned_cols=112 Identities=19% Similarity=0.141 Sum_probs=82.7
Q ss_pred hhhhhhhHHHHHHHHHHHhHHhhHhcccccCCchHHHHHHHHHH-----HHHHHHHHhhhhHHHHHHHHHHHhhcccchh
Q 041759 113 SAFIKGLPAASHFTGCLLGIVFLATLADSSLGRKNLLFLSCLTM-----SVATSLTIFSNNLWIYSLLRFFSGISRATIG 187 (525)
Q Consensus 113 s~~~~g~~~s~~~lg~~~~~~~~G~l~dr~~Grk~~~~~~~~~~-----~i~~~~~~~~~~~~~l~~~r~l~G~~~~~~~ 187 (525)
...+..+....|.+|-.++.--...+ | + |++.+.+.+-. .+...+.-+.++.|..++.-+..|+..|..+
T Consensus 279 ~r~~Y~~Y~~~YQ~GVFISRSS~~~~--r-i--r~lwils~LQ~~nl~~~~l~s~~~fipsi~ivf~lif~eGLlGGa~Y 353 (402)
T PF02487_consen 279 PRDQYRWYQLLYQLGVFISRSSLPFF--R-I--RRLWILSLLQVINLVFLLLQSWYRFIPSIWIVFVLIFYEGLLGGASY 353 (402)
T ss_pred HHHHHHHHHHHHHHHHhhhhcceeee--e-h--hhHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHhhhHHH
Confidence 45677777888888877765433222 3 4 33333333222 1222233346889999999999999999999
Q ss_pred hhhheeeEeeecCcchhhHHhHHHHHHHHHHHHHHHHHHhcc
Q 041759 188 TCTIVLLTEKVGTEWRGLVGILDSFFFTIGTLTLPAIAYTNR 229 (525)
Q Consensus 188 ~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~l~~~l~~~~~ 229 (525)
.-....+.|-.++++|..+++....+-++|.+++.+++..++
T Consensus 354 VNtF~~I~~~~~~~~REFslg~vsvsds~GI~lAgll~l~le 395 (402)
T PF02487_consen 354 VNTFYRISEEVPPEDREFSLGAVSVSDSLGILLAGLLGLPLE 395 (402)
T ss_pred HHHHHHHHhcCCHHHHHHHHHHHHHHhhHHHHHHHHHHHHHH
Confidence 999999998899999999999999999999999999887654
No 276
>PF01733 Nucleoside_tran: Nucleoside transporter; InterPro: IPR002259 Delayed-early response (DER) gene products include growth progression factors and several unknown products of novel cDNAs. Murine and human cDNAs from one novel DER gene (DER12) have been characterised to identify its product and to examine its role in the growth response []. Both sequences encode a hydrophobic 36kDa protein that is predicted to contain 8 transmembrane (TM) domains. The protein has been localised to the nucleolus, where its concentration increases following mitogen stimulation []. Although the function of the protein is unknown, its identification as a nucleolar gene transcriptionally activated by growth factors implicates it as participating in the proliferative response []. Sequence analysis reveals the protein to share a high degree of similarity with the C-terminal portion of equilibrative nucleoside transporters. These proteins are integral membrane proteins which enable the movement of hydrophilic nucleosides and nucleoside analogs down their concentration gradients across cell membranes. ENT family members have been identified in humans, mice, fish, tunicates, slime molds, and bacteria []. ; GO: 0005337 nucleoside transmembrane transporter activity, 0006810 transport, 0016020 membrane; PDB: 1HXI_A.
Probab=96.86 E-value=0.00032 Score=66.47 Aligned_cols=54 Identities=28% Similarity=0.227 Sum_probs=3.6
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhhccccCcchhhhhhHHHHHHHHHHHHHHHHH
Q 041759 420 MRIGLELASLFSAYIAYTVIFIYAIELFPTCVRNSATSIMRLAIIFAAIFSSVL 473 (525)
Q Consensus 420 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~r~~~~~~~~~~~~~g~~~~p~i 473 (525)
..++..++.++..|-..+....+.++..+++.|..+..+....-.+|-.+|..+
T Consensus 250 ~~~i~~~l~g~TNGyl~tl~m~~~p~~v~~~e~e~aG~~~~~~L~~Gl~~Gs~l 303 (309)
T PF01733_consen 250 WFIILMLLFGFTNGYLSTLAMMYAPKSVSPEERELAGSVMSFFLSFGLFIGSVL 303 (309)
T ss_dssp -----------------HHHH---------------------------------
T ss_pred HHHHHHHHHHHccchhhhceeeeCCCcCCHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 556677788888888888899999999988888777776666666666555544
No 277
>PF06963 FPN1: Ferroportin1 (FPN1); InterPro: IPR009716 This entry represents the solute carrier family 40 member 1 family of proteins, also known as Ferroportin 1. It is thought to be involved in iron export from duodenal epithelial cells and also in transfer of iron between maternal and fetal circulation. This family of proteins is known to be localised in the basolateral membrane of polarized epithelial cells [].; GO: 0005381 iron ion transmembrane transporter activity, 0034755 iron ion transmembrane transport, 0016021 integral to membrane
Probab=96.84 E-value=0.025 Score=55.72 Aligned_cols=126 Identities=15% Similarity=0.050 Sum_probs=94.3
Q ss_pred ccceeeccccccchhhhhhhHHHHHHHHHHHhHHhhHhcccccCCchHHHHHHHHHHHHHHHHHHh---h---h----hH
Q 041759 100 ALTIISEWGLECSSAFIKGLPAASHFTGCLLGIVFLATLADSSLGRKNLLFLSCLTMSVATSLTIF---S---N----NL 169 (525)
Q Consensus 100 ~~~i~~~~~~~~~s~~~~g~~~s~~~lg~~~~~~~~G~l~dr~~Grk~~~~~~~~~~~i~~~~~~~---~---~----~~ 169 (525)
+......-|+ ++..+|..-+...+....+.+...++.+| +|..|.=++++....+...++.. . + +.
T Consensus 281 mt~yl~~~G~---s~~~igi~R~~gav~Gl~gT~~~p~l~~r-iGlvr~G~~~l~~q~~~L~~~v~~~~~~~~~~~~~s~ 356 (432)
T PF06963_consen 281 MTAYLKSQGY---SPSVIGIFRGLGAVFGLLGTWVYPWLMKR-IGLVRAGLWSLWWQWVCLALCVVSFWAPGSPFSSISA 356 (432)
T ss_pred HHHHHHHCCC---CHHHHHHHHHHHHHHHHHHHHHHHHHHHH-hcchhhHHHHHHHHHHHHHHHHHHHhcCCCCchhhHH
Confidence 3344444588 99999999999999999999999999999 99988877777655444333322 1 2 33
Q ss_pred HHHHHHHHHHhhcccchhhhhheeeEeeecCcchhhHHhHHHHHHHHHHHHHHHHHHhcc
Q 041759 170 WIYSLLRFFSGISRATIGTCTIVLLTEKVGTEWRGLVGILDSFFFTIGTLTLPAIAYTNR 229 (525)
Q Consensus 170 ~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~l~~~l~~~~~ 229 (525)
..++.+-++.=+|.=+......-++.|..|+++||...+.-....++-.++...++...+
T Consensus 357 ~~l~~gi~~SR~GLW~fDL~~~qi~Qe~V~~~~Rg~v~gvq~sl~~lf~ll~~~~~ii~~ 416 (432)
T PF06963_consen 357 YLLLGGIALSRIGLWSFDLAVTQIMQENVPESERGAVSGVQNSLQSLFELLSFVLTIIFP 416 (432)
T ss_pred HHHHHHHHHHHHHHHhhhHHHHHhhcccCCHHHhhHHHHHHHHHHHHHHHHHHHHHhccC
Confidence 444545555555555566677788999999999999999999999988888777766553
No 278
>PF07672 MFS_Mycoplasma: Mycoplasma MFS transporter; InterPro: IPR011699 These proteins share some similarity with members of the Major Facilitator Superfamily (MFS).
Probab=96.49 E-value=0.079 Score=47.48 Aligned_cols=50 Identities=14% Similarity=0.229 Sum_probs=35.4
Q ss_pred cchhhHHhHHHHHHHHHHHHHHHHHHhc------cCCchHHHHHHHHHHHHHHHhH
Q 041759 201 EWRGLVGILDSFFFTIGTLTLPAIAYTN------RSSSWTIIYLWTSIPTLVYSGL 250 (525)
Q Consensus 201 ~~r~~~~~~~~~~~~~G~~l~~~l~~~~------~~~~wr~~f~~~~~~~~~~~~~ 250 (525)
|+|+....+...+.++|.++.-+.-... ...+|++++.+.+++.++.+++
T Consensus 2 k~K~~~s~~n~~gf~iG~ii~~ipF~~~~~~~~~~~~~W~~I~si~~lL~~IpLIl 57 (267)
T PF07672_consen 2 KKKSILSQFNPWGFNIGTIIVNIPFLISSSVVIALTNNWQWILSIFILLIFIPLIL 57 (267)
T ss_pred CccceeeeeccccchhhHHHHHhhHHhcchHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 5678888888889999998754331111 1346999999999888877733
No 279
>COG0477 ProP Permeases of the major facilitator superfamily [Carbohydrate transport and metabolism / Amino acid transport and metabolism / Inorganic ion transport and metabolism / General function prediction only]
Probab=96.39 E-value=0.063 Score=50.41 Aligned_cols=112 Identities=16% Similarity=0.165 Sum_probs=75.1
Q ss_pred HHHHHHHHhcccccccCchhHHHHHHHHHhhcChhHHHHHHHHHHHHHHHHHHhccccccchhHHHHHHHHHHHHHHHHH
Q 041759 357 LGVVFNALLEIPNLASTIPSFFLTFFLIQKWNRKSSLLVLFIISGICSIMAVVANDISNAGKRMRIGLELASLFSAYIAY 436 (525)
Q Consensus 357 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~d~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 436 (525)
......+...+ +...+.++.|.+.||.|||+.+..+.....++.++..+.... ......+.....+++.+...
T Consensus 40 ~~~~~~~~~~~----~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~g~~~~~~~ 112 (338)
T COG0477 40 LYGLLLSAFFL----GYAIGSLLAGPLGDRYGRRKVLIIGLLLFLLGTLLLALAPNV---GLALLLILRLLQGLGGGGLL 112 (338)
T ss_pred HHHHHHHHHHH----HHHHHhhhhhhccccccchHHHHHHHHHHHHHHHHHHhCccc---hHHHHHHHHHHHHhhhHHHH
Confidence 34444444444 444666899999999999977777776544443444443331 12344445555677777888
Q ss_pred HHHHhhhccccCc-chhhhhhHHHHH-HHHHHHHHHHHHHh
Q 041759 437 TVIFIYAIELFPT-CVRNSATSIMRL-AIIFAAIFSSVLVA 475 (525)
Q Consensus 437 ~~~~~~~~~~~p~-~~r~~~~~~~~~-~~~~g~~~~p~i~~ 475 (525)
+....+..|..|. +.|+...+.... ...+|..++|.+.+
T Consensus 113 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 153 (338)
T COG0477 113 PVASALLSEWFPEATERGLAVGLVTLGAGALGLALGPLLAG 153 (338)
T ss_pred HHHHHHHHHhcCchhHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 8999999999997 567888887777 46777778876655
No 280
>PF03137 OATP: Organic Anion Transporter Polypeptide (OATP) family; InterPro: IPR004156 This family consists of several eukaryotic Organic-Anion-Transporting Polypeptides (OATPs). Several have been identified mostly in human and rat. Different OATPs vary in tissue distribution and substrate specificity. Since the numbering of different OATPs in particular species was based originally on the order of discovery, similarly numbered OATPs in humans and rats did not necessarily correspond in function, tissue distribution and substrate specificity (in spite of the name, some OATPs also transport organic cations and neutral molecules) so a scheme of using digits for rat OATPs and letters for human ones was introduced []. Prostaglandin transporter (PGT) proteins are also considered to be OATP family members. In addition, the methotrexate transporter OATK is closely related to OATPs. This family also includes several predicted proteins from Caenorhabditis elegans and Drosophila melanogaster. This similarity was not previously noted. Note: Members of this family are described (in the UniProtKB/Swiss-Prot database) as belonging to the SLC21 family of transporters.; GO: 0005215 transporter activity, 0006810 transport, 0016020 membrane; PDB: 3MRR_P.
Probab=96.38 E-value=0.00052 Score=69.93 Aligned_cols=130 Identities=12% Similarity=0.061 Sum_probs=2.4
Q ss_pred hhhhhcccccCChhHHHHHHHHHhcccccccCchhHHHHHHHHHhhcChhHHHHHHHHHHHHHHHHHHhcccc-------
Q 041759 342 YGMTLGIENLGFDIYLGVVFNALLEIPNLASTIPSFFLTFFLIQKWNRKSSLLVLFIISGICSIMAVVANDIS------- 414 (525)
Q Consensus 342 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~d~~g~~~~~~~~~~~~~~~~~~~~~~~~~~------- 414 (525)
..++.+-++++++..+++.+.+...+ +.++..++..++.+|..|-+++..+.++++++.+++.+.....
T Consensus 24 ~~lttiErRF~l~S~~~G~i~s~~di----~~~~~~~~vsy~g~~~hrprwig~g~~~~~~g~~l~~lPhf~~~~y~~~~ 99 (539)
T PF03137_consen 24 SSLTTIERRFGLSSSQSGLISSSYDI----GSLVVVLFVSYFGGRGHRPRWIGIGALLMGLGSLLFALPHFLSGPYSYEE 99 (539)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred HHHHHHHHhcCCCHHHHHHHHHHHHH----HHHHHHHHHHHHhhhcCCcceeeecHHHHHHHHHHHhccHhhcCCCcccc
Confidence 33456667789999999999998888 7777777778888888888888889888888887776431100
Q ss_pred --------------------------------------ccchhHHHHHHHHHHHHHHHHHHHHHhhhccccCcchhhhhh
Q 041759 415 --------------------------------------NAGKRMRIGLELASLFSAYIAYTVIFIYAIELFPTCVRNSAT 456 (525)
Q Consensus 415 --------------------------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~r~~~~ 456 (525)
...+..+++..++.|++....+++..+|+-|..+++.-+...
T Consensus 100 ~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~gq~l~GiG~~pl~tLG~tYiDDnv~~~~splYi 179 (539)
T PF03137_consen 100 ASNSNGNSSISSNLCDSSSSSQASSDCQDCCSSSSSSLSGYFYVFILGQLLIGIGATPLYTLGITYIDDNVSKKNSPLYI 179 (539)
T ss_dssp ----------------------------------------------------SSS-------------------------
T ss_pred ccccccccccccccccccccccccCccccccccccccchHHHHHHHHHHHHHhccccCCccceeeeeccccccccCccch
Confidence 001234556667777888888899999999999999988999
Q ss_pred HHHHHHHHHHHHHHHHHHh
Q 041759 457 SIMRLAIIFAAIFSSVLVA 475 (525)
Q Consensus 457 ~~~~~~~~~g~~~~p~i~~ 475 (525)
|+......+|-.+|-++.+
T Consensus 180 Gi~~~~~~lGPa~Gf~lg~ 198 (539)
T PF03137_consen 180 GILYAMSILGPALGFLLGS 198 (539)
T ss_dssp -------------------
T ss_pred hhhhHHhhccHHHHHHHHH
Confidence 9998888777666555543
No 281
>KOG3626 consensus Organic anion transporter [Secondary metabolites biosynthesis, transport and catabolism]
Probab=96.08 E-value=0.024 Score=58.76 Aligned_cols=160 Identities=9% Similarity=0.040 Sum_probs=114.9
Q ss_pred hhcccccCChhHHHHHHHHHhcccccccCchhHHHHHHHHHhhcChhHHHHHHHHHHHHHHHHHHhccc---c-------
Q 041759 345 TLGIENLGFDIYLGVVFNALLEIPNLASTIPSFFLTFFLIQKWNRKSSLLVLFIISGICSIMAVVANDI---S------- 414 (525)
Q Consensus 345 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~d~~g~~~~~~~~~~~~~~~~~~~~~~~~~---~------- 414 (525)
...-+.++++..+.+.+.+...+ +.++...+..+...|..|-+++-++.++++++.++..+.... +
T Consensus 121 ttiErRF~i~Ss~sG~I~s~~di----g~~l~i~fVsYfG~r~HrPr~Ig~G~~~m~lgsll~alPHf~~~~y~~~~~~~ 196 (735)
T KOG3626|consen 121 TTIERRFKISSSQSGLIASSYDI----GNLLLIIFVSYFGSRGHRPRWIGIGLVLMGLGSLLFALPHFFSGPYEYELEVI 196 (735)
T ss_pred hhhhhhcCCCCCcceeEeeeccc----chhhhhHhHHHhccccCccceeeechhHHHHHHHHHhChHHhcCcchhhhhhh
Confidence 33445578888888888888888 777777888888888888899999999998888877654100 0
Q ss_pred ----------------------------------c---cchhHHHHHHHHHHHHHHHHHHHHHhhhccccCcchhhhhhH
Q 041759 415 ----------------------------------N---AGKRMRIGLELASLFSAYIAYTVIFIYAIELFPTCVRNSATS 457 (525)
Q Consensus 415 ----------------------------------~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~r~~~~~ 457 (525)
. ..|.++++..++.|.+....+++..+|+-|...+++-....|
T Consensus 197 ~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~llff~~q~l~GIG~Tpi~tlGisYiDDnvk~~~SplYlg 276 (735)
T KOG3626|consen 197 KQSVENPSSSLSFCCCNKSTNLCRPSPENSKREKESTSYPFLLFFLGQLLLGIGATPIFTLGISYIDDNVKKKNSPLYLG 276 (735)
T ss_pred hccccCCccccchhhccCCccccCCCCCcccccccCCchhHHHHHHHHHHhhcCCCCCccCCCccccccccccCCcHHHH
Confidence 0 023355556666777777777888889999998888889999
Q ss_pred HHHHHHHHHHHHHHHHHhh------cc--C-------------chhHHHHHHHHHHHHHHHHHHhccCCCCC
Q 041759 458 IMRLAIIFAAIFSSVLVAA------GS--N-------------NEFVSYGVFGLVIICCGFFVICLPETRGS 508 (525)
Q Consensus 458 ~~~~~~~~g~~~~p~i~~~------~~--~-------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 508 (525)
+..++..+|-++|-++.++ +. . .++..|++.+.+.++.++.++++|+..++
T Consensus 277 i~~~~~~lGPaiGfllgS~~l~lYvD~~~~~~~it~~DPrWIGAWWlGFLi~g~~~~~~a~p~f~fPk~lp~ 348 (735)
T KOG3626|consen 277 ILYSMAILGPAIGFLLGSFCLKLYVDFGLSPIGITPTDPRWIGAWWLGFLICGALLLFSAVPLFFFPKELPK 348 (735)
T ss_pred HHHHHHHhhhHHHHHHHHHHHHeeeccccCCCCCCCCCcchhhHHHHHHHHHHHHHHHHHHHHHhCcccCcc
Confidence 9998887777766555542 11 0 14556777788888888878888765544
No 282
>KOG3098 consensus Uncharacterized conserved protein [Function unknown]
Probab=95.97 E-value=0.11 Score=51.39 Aligned_cols=110 Identities=15% Similarity=0.209 Sum_probs=84.5
Q ss_pred hhhhhhHHHHHHHHHHHhHHhhHhcccc--cCCchHHHHHHHHHHHHHHHHHHhh------------------hhHHHHH
Q 041759 114 AFIKGLPAASHFTGCLLGIVFLATLADS--SLGRKNLLFLSCLTMSVATSLTIFS------------------NNLWIYS 173 (525)
Q Consensus 114 ~~~~g~~~s~~~lg~~~~~~~~G~l~dr--~~Grk~~~~~~~~~~~i~~~~~~~~------------------~~~~~l~ 173 (525)
....++-.-...+|..+++.+.+.+.+| ++||++.+.++.++..++.++.-.. +++...+
T Consensus 278 ~~~~ai~~~~~g~g~v~~g~~~~~l~~rir~fg~~~~~~~~~~~~~~~~~li~l~~p~dap~~~t~~~~~~~~~~~~~~~ 357 (461)
T KOG3098|consen 278 TYLIAIYSIGIGLGEVIGGLDFSILSKRIRGFGRKPTVLIGIIIHLIGFLLIHLSFPNDAPLRPTDSPPLLFTPSYYLAL 357 (461)
T ss_pred hhHHHHHHHHHhHHHHHHHHHHHHHhhhhhhcccCcchhHHHHHHHHHHHHHhccccccCCCCCCcccccccccchhHHH
Confidence 3444444455556666667777778765 4999999999999988888876543 2466778
Q ss_pred HHHHHHhhcccchhhhhheeeEeeecCcchhhHHhHHHHHHHHHHHHHHHH
Q 041759 174 LLRFFSGISRATIGTCTIVLLTEKVGTEWRGLVGILDSFFFTIGTLTLPAI 224 (525)
Q Consensus 174 ~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~l~~~l 224 (525)
+.-++.|++-+......+.++.+.. +++|..+.++...-..++..++...
T Consensus 358 ii~~l~G~~D~~~~t~~~~ii~~~~-~~~~~~~fsi~kfyq~~~s~v~~f~ 407 (461)
T KOG3098|consen 358 IIGFLLGFGDACFNTQRYVIIALLY-PDDRAQAFSLFKFYQSVASCVAFFF 407 (461)
T ss_pred HHHHHHhhHHHHHHHHHHHHHHHHh-cCchHHHHHHHHHHHHHHHHHHhhh
Confidence 8889999999999999999999988 6778888888888877777765554
No 283
>PF01770 Folate_carrier: Reduced folate carrier; InterPro: IPR002666 The reduced folate carrier (a transmembrane glycoprotein) transports reduced folate into mammalian cells via the carrier mediated mechanism (as opposed to the receptor mediated mechanism) it also transports cytotoxic folate analogues used in chemotherapy [], such as methotrexate (MTX). Mammalian cells have an absolute requirement for exogenous folates which are needed for growth, and biosynthesis of macromolecules [].; GO: 0005542 folic acid binding, 0008518 reduced folate carrier activity, 0006810 transport, 0016020 membrane
Probab=95.88 E-value=0.67 Score=45.17 Aligned_cols=125 Identities=13% Similarity=0.090 Sum_probs=82.3
Q ss_pred hhHHHHHHHHHhhcChhHHHHHHHHHHHHHHHHHHhccccccchhHHHHHHHHHHHHHHHHHHHHHhhhccccCcchhhh
Q 041759 375 PSFFLTFFLIQKWNRKSSLLVLFIISGICSIMAVVANDISNAGKRMRIGLELASLFSAYIAYTVIFIYAIELFPTCVRNS 454 (525)
Q Consensus 375 ~~~~~~~~l~d~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~r~~ 454 (525)
+..+....+.|.++-|++++++.+...+...++.+.... ..+-+.-+..|..... -...++++-...|+++--+
T Consensus 56 ~~l~~vflltd~l~Ykpviil~~~~~i~t~~lll~~~sv-----~~mq~~q~~yg~~~a~-evay~sYiys~v~~~~yq~ 129 (412)
T PF01770_consen 56 AFLLPVFLLTDYLRYKPVIILQALSYIITWLLLLFGTSV-----LAMQLMQFFYGLATAA-EVAYYSYIYSVVDKEHYQK 129 (412)
T ss_pred HHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHCcH-----HHHHHHHHHHHHHHHH-HHHHHHHheeecCHHHHHH
Confidence 455666788999999999999998888888877776544 3444555555444333 3566677777888887788
Q ss_pred hhHHHHHHHHHHHHHHHHHHh----hccCchhHHHHHHHHHHHHHHHHHHhccCC
Q 041759 455 ATSIMRLAIIFAAIFSSVLVA----AGSNNEFVSYGVFGLVIICCGFFVICLPET 505 (525)
Q Consensus 455 ~~~~~~~~~~~g~~~~p~i~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 505 (525)
+.+.......+|.+++.+++- .....+.....+-.....++.++.+++|..
T Consensus 130 vts~~raa~l~g~~~s~~lgQllvs~~~~sy~~L~~isl~~~~~a~~~~~fLP~~ 184 (412)
T PF01770_consen 130 VTSYTRAATLVGRFISSLLGQLLVSFGGVSYFQLNYISLASVSLALLIALFLPMP 184 (412)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHcCCC
Confidence 888888777666665555544 344444444444444455555666677643
No 284
>PRK03612 spermidine synthase; Provisional
Probab=95.71 E-value=0.11 Score=52.94 Aligned_cols=136 Identities=10% Similarity=-0.018 Sum_probs=78.0
Q ss_pred cccccchhhhhhhHHHHHHHHHHHhHHhhHhcccccCCchHHHHHHHHH--HH-HHHHHH----HhhhhH-HHHHHHHHH
Q 041759 107 WGLECSSAFIKGLPAASHFTGCLLGIVFLATLADSSLGRKNLLFLSCLT--MS-VATSLT----IFSNNL-WIYSLLRFF 178 (525)
Q Consensus 107 ~~~~~~s~~~~g~~~s~~~lg~~~~~~~~G~l~dr~~Grk~~~~~~~~~--~~-i~~~~~----~~~~~~-~~l~~~r~l 178 (525)
+|- +....+.+.+++++|.++|+.++|++.++ .- ++...+-+.+ .+ ++..+. ++...+ ..++..-++
T Consensus 45 ~G~---s~~~~~~ii~~fl~glalGs~l~~~~~~~-~~-~~~~~~e~~i~l~~~~~~~ll~~~~~~~~~~~~~~~~~~~~ 119 (521)
T PRK03612 45 LGD---SVTQFSTVIGLMLFAMGVGALLSKYLLRD-AA-AGFVAVELLLALLGGLSALILYAAFAFQGLSRLLLYVLVLL 119 (521)
T ss_pred hCc---hHHHHHHHHHHHHHHHHHHHHHHHhhhhh-HH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 455 78888999999999999999999988754 33 3322222111 11 111111 111111 223344566
Q ss_pred HhhcccchhhhhheeeEeeecCcchhhHHhHHHHHHHHHHHHHHHH-HHh-ccCCchHHHHHHHHHHHHHHH
Q 041759 179 SGISRATIGTCTIVLLTEKVGTEWRGLVGILDSFFFTIGTLTLPAI-AYT-NRSSSWTIIYLWTSIPTLVYS 248 (525)
Q Consensus 179 ~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~l~~~l-~~~-~~~~~wr~~f~~~~~~~~~~~ 248 (525)
.|+..|+..|....+..+.. .++-++..+-......+|.++|.++ +.+ ++..|-....++.+.+.++..
T Consensus 120 ~~~l~G~~~Pl~~~~~~~~~-~~~~g~~~g~ly~~ntlGa~~G~l~~~~vLlp~lG~~~t~~~~a~l~~~~a 190 (521)
T PRK03612 120 IGLLIGMEIPLLMRILQRIR-DQHLGHNVATVLAADYLGALVGGLAFPFLLLPRLGLIRTAALTGSLNLLAA 190 (521)
T ss_pred HHHHHHHHHHHHHHHHHhcc-ccchhhhhhhhHhHHhHHHHHHHHHHHHHHHHhcchHHHHHHHHHHHHHHH
Confidence 78888888887776655432 2234566777777888888888877 333 334554444444444444433
No 285
>PF03219 TLC: TLC ATP/ADP transporter; InterPro: IPR004667 These proteins are members of the ATP:ADP Antiporter (AAA) family, which consists of nucleotide transporters that have 12 GES predicted transmembrane regions. One protein from Rickettsia prowazekii functions to take up ATP from the eukaryotic cell cytoplasm into the bacterium in exchange for ADP. Five AAA family paralogues are encoded within the genome of R. prowazekii. This organism transports UMP and GMP but not CMP, and it seems likely that one or more of the AAA family paralogues are responsible. The genome of Chlamydia trachomatis encodes two AAA family members, Npt1 and Npt2, which catalyse ATP/ADP exchange and GTP, CTP, ATP and UTP uptake probably employing a proton symport mechanism. Two homologous adenylate translocators of Arabidopsis thaliana are postulated to be localized to the intracellular plastid membrane where they function as ATP importers.; GO: 0005471 ATP:ADP antiporter activity, 0005524 ATP binding, 0006810 transport, 0016021 integral to membrane
Probab=95.69 E-value=1.8 Score=43.65 Aligned_cols=148 Identities=14% Similarity=0.028 Sum_probs=80.9
Q ss_pred HHHHHHHHHHHHHHHHHHhhhhhccccc---CChhHHHHHHHHHhcccccccCchhHHHHHHHHHhhcChhHHHHHHHHH
Q 041759 324 LERTLALMVPGFGIGVVYYGMTLGIENL---GFDIYLGVVFNALLEIPNLASTIPSFFLTFFLIQKWNRKSSLLVLFIIS 400 (525)
Q Consensus 324 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~d~~g~~~~~~~~~~~~ 400 (525)
++.++...+..++..+.+..+-..-+.+ ..++.....+=....+| +.++...+-.++.+++++.+++.+.....
T Consensus 23 ~~k~~~l~~m~f~i~f~y~~lR~~KD~lvvt~~gae~I~flK~~~vlP---~a~~f~~~y~kl~n~~s~~~lFy~~~~~F 99 (491)
T PF03219_consen 23 LKKFLPLALMFFFILFNYTILRDLKDTLVVTAQGAEVIPFLKVWGVLP---VAILFTILYSKLSNRLSREKLFYIIIIPF 99 (491)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhcCeEEEecCChhHHHHHHHHHHHH---HHHHHHHHHHHHHhcCCHHHHHHHHHHHH
Confidence 4455555566666666666553322221 11222222221111111 11255667788999999998887666555
Q ss_pred HHHHHHHHHh--cccc---c----------------------cchhHHHHHHHHHHHHHHHHHH-HHHhhhccccCcchh
Q 041759 401 GICSIMAVVA--NDIS---N----------------------AGKRMRIGLELASLFSAYIAYT-VIFIYAIELFPTCVR 452 (525)
Q Consensus 401 ~~~~~~~~~~--~~~~---~----------------------~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~p~~~r 452 (525)
.....++++. +... . .+| ...+..+..-.......+ ..|.++.|.++.++.
T Consensus 100 ~~fF~~f~~vlyP~~~~lhp~~~~~~~~~~~~~~~~~~i~~~~~W-t~slfYv~aElwgsvvlSlLFW~fAN~itt~~eA 178 (491)
T PF03219_consen 100 LGFFALFAFVLYPNRDILHPDAFADKLLAILPPGFKGFIAMFRNW-TFSLFYVMAELWGSVVLSLLFWGFANEITTVEEA 178 (491)
T ss_pred HHHHHHHHHHHhhchhhcCCCHHHHHhhhhccchHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHhcCCHHHH
Confidence 5555444443 1110 0 011 111111111111222233 568999999999998
Q ss_pred hhhhHHHHHHHHHHHHHHHHHHh
Q 041759 453 NSATSIMRLAIIFAAIFSSVLVA 475 (525)
Q Consensus 453 ~~~~~~~~~~~~~g~~~~p~i~~ 475 (525)
.+..++.....++|.++++.+..
T Consensus 179 KRfYpl~g~ganigli~sG~~~~ 201 (491)
T PF03219_consen 179 KRFYPLFGLGANIGLIFSGQLTS 201 (491)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999988877665
No 286
>KOG3097 consensus Predicted membrane protein [Function unknown]
Probab=95.68 E-value=0.42 Score=44.34 Aligned_cols=98 Identities=16% Similarity=0.121 Sum_probs=68.2
Q ss_pred HHHHHHhHHhhHhcccccCCchHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHhhcccchhhhhheeeEeeecC--cc
Q 041759 125 FTGCLLGIVFLATLADSSLGRKNLLFLSCLTMSVATSLTIFSNNLWIYSLLRFFSGISRATIGTCTIVLLTEKVGT--EW 202 (525)
Q Consensus 125 ~lg~~~~~~~~G~l~dr~~Grk~~~~~~~~~~~i~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~--~~ 202 (525)
.+......++.+.+..+ +|-|.++.++...+...-. .=+-+.+..++-.-.+.|++.+..+..--+|+++.-.+ ++
T Consensus 68 y~~l~~s~m~~~~~Ir~-~g~K~tm~lav~~Y~lyiA-~Nl~pr~~tlVPa~~~~G~aa~p~W~SkgtYlT~~g~~ya~~ 145 (390)
T KOG3097|consen 68 YLSLIDSSMFMPLLIRF-LGTKWTMVLAVFPYALYIA-ANLEPRYETLVPAGLVLGMAAGPIWASKGTYLTPMGQNYANQ 145 (390)
T ss_pred hHHHHHHHHHHHHHHHH-HhhHHHHHHHHHHHHHHHH-hhcchhHHhhccHHHhhccccccccccCcceecHHHHHHHHh
Confidence 34444555666688888 9999999988877664322 22336788899999999999999999988998876543 33
Q ss_pred h-------------hhHHhHHHHHHHHHHHHHHHH
Q 041759 203 R-------------GLVGILDSFFFTIGTLTLPAI 224 (525)
Q Consensus 203 r-------------~~~~~~~~~~~~~G~~l~~~l 224 (525)
| +..+.+++.+...|..+..++
T Consensus 146 ~~~q~~~~~~~~ffg~Ffii~~~~qv~gn~issli 180 (390)
T KOG3097|consen 146 RGEQAGDGMKVRFFGEFFIIFQCAQVWGNLISSLI 180 (390)
T ss_pred hhhhccCceeeeehhHHHHHHHHHHHHHHHHHHHH
Confidence 4 234555666666666655544
No 287
>PRK03612 spermidine synthase; Provisional
Probab=95.65 E-value=0.51 Score=48.24 Aligned_cols=121 Identities=10% Similarity=0.050 Sum_probs=59.5
Q ss_pred cCChhHHHHHHHHHhcccccccCchhHHHHHHHHHhhcChhHHHH-HH-HHHHHHHHHHHHhccccccchhHHHHHHHHH
Q 041759 351 LGFDIYLGVVFNALLEIPNLASTIPSFFLTFFLIQKWNRKSSLLV-LF-IISGICSIMAVVANDISNAGKRMRIGLELAS 428 (525)
Q Consensus 351 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~d~~g~~~~~~~-~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 428 (525)
+|.+......+.++... +..+|+.+++++.++..++....- .. ++..++..++..............+...++.
T Consensus 45 ~G~s~~~~~~ii~~fl~----glalGs~l~~~~~~~~~~~~~~~e~~i~l~~~~~~~ll~~~~~~~~~~~~~~~~~~~~~ 120 (521)
T PRK03612 45 LGDSVTQFSTVIGLMLF----AMGVGALLSKYLLRDAAAGFVAVELLLALLGGLSALILYAAFAFQGLSRLLLYVLVLLI 120 (521)
T ss_pred hCchHHHHHHHHHHHHH----HHHHHHHHHHhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 56666666666666655 555666666655433222211111 11 1111111111111110000112233444555
Q ss_pred HHHHHHHHHHHHhhhccccCcchhhhhhHHHHHHHHHHHHHHHHHHhh
Q 041759 429 LFSAYIAYTVIFIYAIELFPTCVRNSATSIMRLAIIFAAIFSSVLVAA 476 (525)
Q Consensus 429 ~~~~~~~~~~~~~~~~~~~p~~~r~~~~~~~~~~~~~g~~~~p~i~~~ 476 (525)
++..|...|...-+..+... +.-+...|-.+..+.+|+++|+++.++
T Consensus 121 ~~l~G~~~Pl~~~~~~~~~~-~~~g~~~g~ly~~ntlGa~~G~l~~~~ 167 (521)
T PRK03612 121 GLLIGMEIPLLMRILQRIRD-QHLGHNVATVLAADYLGALVGGLAFPF 167 (521)
T ss_pred HHHHHHHHHHHHHHHHhccc-cchhhhhhhhHhHHhHHHHHHHHHHHH
Confidence 67777777776665554322 123566777788888888888888773
No 288
>TIGR00939 2a57 Equilibrative Nucleoside Transporter (ENT).
Probab=95.47 E-value=0.67 Score=46.20 Aligned_cols=111 Identities=15% Similarity=0.104 Sum_probs=79.8
Q ss_pred hhhhHHHHHHHHHHHhHHhhHhcccccCCch--HHHHHH--HHHHHHHHHHHHh---------hhhHHHHHHHHHHHhhc
Q 041759 116 IKGLPAASHFTGCLLGIVFLATLADSSLGRK--NLLFLS--CLTMSVATSLTIF---------SNNLWIYSLLRFFSGIS 182 (525)
Q Consensus 116 ~~g~~~s~~~lg~~~~~~~~G~l~dr~~Grk--~~~~~~--~~~~~i~~~~~~~---------~~~~~~l~~~r~l~G~~ 182 (525)
..-++...|.+|-.+|..+..+.. . -++| .+++.+ =+++.-..++|.. -++-+..++..++.|+.
T Consensus 308 ~~~i~~~~fNvgD~vGR~~~~~~~-~-p~~~~~~l~i~s~~R~iFIPlf~lcn~~~~~~~p~~~~~d~~~~~~~~l~glt 385 (437)
T TIGR00939 308 YPIICFLLFNLFDWLGRSLTSKFM-W-PDEDSRWLPILSFLRVLFIPLFLLCNYPQRSRLPVFFPGDAYFIILMLLFGFS 385 (437)
T ss_pred HHHHHHHHHHHHHHHHhhhhheeE-e-eCCCccchHHHHHHHHHHHHHHHHhcCCccccCCeeecccHHHHHHHHHHHHh
Confidence 455777888888888888665431 1 1222 333222 2333333344432 24667778889999999
Q ss_pred ccchhhhhheeeEeeecCcchhhHHhHHHHHHHHHHHHHHHHHHhc
Q 041759 183 RATIGTCTIVLLTEKVGTEWRGLVGILDSFFFTIGTLTLPAIAYTN 228 (525)
Q Consensus 183 ~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~l~~~l~~~~ 228 (525)
.|-....+..+..+..++++|..+..+...+..+|..+|..++.++
T Consensus 386 nGy~~s~~m~~~p~~v~~~e~e~aG~~~~~~l~~Gl~~Gs~l~~~~ 431 (437)
T TIGR00939 386 NGYLGSLSMCLAPRQVDPHEREVAGALMVIFLLVGLALGAVLSFLF 431 (437)
T ss_pred hhHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999999999999999999998886654
No 289
>KOG0637 consensus Sucrose transporter and related proteins [Carbohydrate transport and metabolism]
Probab=95.33 E-value=0.044 Score=53.08 Aligned_cols=142 Identities=11% Similarity=0.024 Sum_probs=88.1
Q ss_pred HHHHHHHHHHHhhhhhcccccCChhHHHHHHHHHhcccccccCchhHHHHHHHHHh----hcChhHHHH-HHHHHHHHHH
Q 041759 331 MVPGFGIGVVYYGMTLGIENLGFDIYLGVVFNALLEIPNLASTIPSFFLTFFLIQK----WNRKSSLLV-LFIISGICSI 405 (525)
Q Consensus 331 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~d~----~g~~~~~~~-~~~~~~~~~~ 405 (525)
+...++...-..+.+.++++.|.+......+....-+ ..++..++.|..+|| +||||.++. +.....++++
T Consensus 42 ~Gvqf~wA~elsy~tPyl~~lGvphk~~S~iw~~gPi----~G~~vQP~vG~~SDrc~sr~GRRRPfI~~~s~~i~~~l~ 117 (498)
T KOG0637|consen 42 AGVQFGWALELSYLTPYLQSLGVPHKWSSIIWLCGPL----SGLLVQPLVGSASDRCTSRYGRRRPFILAGSLLIAVSLF 117 (498)
T ss_pred HHHHHHHHHHhccccHHHHHcCCCccccccccccccc----ccceecccccccccccccccccccchHHHhhHHHHHHHh
Confidence 3334444444455566677888887777666665555 555677788888887 677776654 5555666666
Q ss_pred HHHHhcccc------ccc----h--hHHHHHHHHHHHHHHHHHHHHHhhhccccCcchhhh-hhHHHHHHHHHHHHHHHH
Q 041759 406 MAVVANDIS------NAG----K--RMRIGLELASLFSAYIAYTVIFIYAIELFPTCVRNS-ATSIMRLAIIFAAIFSSV 472 (525)
Q Consensus 406 ~~~~~~~~~------~~~----~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~r~~-~~~~~~~~~~~g~~~~p~ 472 (525)
++++..... ... + ...++...+.-+.........-++..++...+.+.+ +++....+..+|+.++-.
T Consensus 118 Lig~aaDig~~lgd~~~~~~~~rai~~~~lg~~LLD~A~n~~qgp~ra~L~Dl~~~d~~~~~Ans~f~~f~avGnvLGY~ 197 (498)
T KOG0637|consen 118 LIGYAADIGLLLGDNERKPVKPRAIVLFILGFWLLDVANNTLQGPCRALLADLARGDAKKTRANSVFSFFMAVGNVLGYA 197 (498)
T ss_pred hhhhHhhhhHHhcCCcccccchHHHHHHHHHhHHHHhhhhhhhhhHHHHHHHhccChhhhhccchhHHHHHHhcceeeee
Confidence 666553211 011 1 112222233334444555677788899887777777 888888888888887766
Q ss_pred HHhh
Q 041759 473 LVAA 476 (525)
Q Consensus 473 i~~~ 476 (525)
+..+
T Consensus 198 ~g~y 201 (498)
T KOG0637|consen 198 LGSY 201 (498)
T ss_pred cccc
Confidence 6543
No 290
>PF00854 PTR2: POT family; InterPro: IPR000109 This entry represents the POT (proton-dependent oligopeptide transport) family, which all appear to be proton dependent transporters. The transport of peptides into cells is a well-documented biological phenomenon which is accomplished by specific, energy-dependent transporters found in a number of organisms as diverse as bacteria and humans. The POT family of proteins is distinct from the ABC-type peptide transporters and was uncovered by sequence analyses of a number of recently discovered peptide transport proteins []. These proteins that seem to be mainly involved in the intake of small peptides with the concomitant uptake of a proton []. These integral membrane proteins are predicted to comprise twelve transmembrane regions.; GO: 0005215 transporter activity, 0006857 oligopeptide transport, 0016020 membrane; PDB: 4APS_A 2XUT_C.
Probab=95.32 E-value=0.17 Score=49.60 Aligned_cols=112 Identities=11% Similarity=0.043 Sum_probs=79.2
Q ss_pred hHHHHHHHHHHHHHHHHHHhcccc----ccchhHHHHHHHHHHHHHHHHHHHHHhhhccccCcc---hhhhhhHHHHHHH
Q 041759 391 SSLLVLFIISGICSIMAVVANDIS----NAGKRMRIGLELASLFSAYIAYTVIFIYAIELFPTC---VRNSATSIMRLAI 463 (525)
Q Consensus 391 ~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~---~r~~~~~~~~~~~ 463 (525)
+.+.++.++..++.+++.+..... +......++.+.+.++|.|+.=|....+..|.++++ .|.+.....+...
T Consensus 2 ktI~~g~~~~~~G~~ll~l~~~~~~~~~~~~~~~~~~gL~lia~G~G~~K~ni~~~~~dq~~~~~~~~~~~~F~~fY~~i 81 (372)
T PF00854_consen 2 KTILLGSIVYLLGHVLLTLSAIPPSLPSGIQLGLFYIGLALIAVGTGGIKPNISPFGADQYDEDDDSRRDSFFNWFYWGI 81 (372)
T ss_dssp HHHHHHHHHHHHHHHH--HHHTSSSC------CHHHHHHHHHHHHHHCCHHHHHHHHHHCSSTTTTTHHHHHHHHHHHHH
T ss_pred HhhhHHHHHHHHHHHHhHHHHhcchhhhhHHHHHHHHHHHHHHhccccccccHHHHHHHHhcccchhhhhhhHHHHHHHH
Confidence 456778888888888855543321 112235677777888999999999999999998765 4556677777788
Q ss_pred HHHHHHHHHHHhh--ccCchhHHHHHHHHHHHHHHHHHHhc
Q 041759 464 IFAAIFSSVLVAA--GSNNEFVSYGVFGLVIICCGFFVICL 502 (525)
Q Consensus 464 ~~g~~~~p~i~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~ 502 (525)
++|+.+++.+.++ ...++...|.+.++..+++.+..+..
T Consensus 82 n~G~~~~~~~~~~i~~~~~~~~~f~i~~~~~~~~~~~f~~~ 122 (372)
T PF00854_consen 82 NIGSLFSPTLVPYIQQNYGWFLGFGIPAIGMLLALIVFLSG 122 (372)
T ss_dssp HHHHHHHHHCCCHHHHCS-HHHHHHHHHHHHHHHHHHHHCC
T ss_pred hhhhHhhcccchhhccccchhhhhhHHHHHHHHHHHHHHhC
Confidence 9999999888875 34678888888888777776655444
No 291
>KOG1479 consensus Nucleoside transporter [Nucleotide transport and metabolism]
Probab=94.73 E-value=0.22 Score=48.00 Aligned_cols=113 Identities=15% Similarity=0.109 Sum_probs=85.5
Q ss_pred hhhhhhhHHHH-HHHHHHHhHHhhHhcccccCCchHHHHHHHHH--HHHHHHHH------HhhhhHHHHHHHHHHHhhcc
Q 041759 113 SAFIKGLPAAS-HFTGCLLGIVFLATLADSSLGRKNLLFLSCLT--MSVATSLT------IFSNNLWIYSLLRFFSGISR 183 (525)
Q Consensus 113 s~~~~g~~~s~-~~lg~~~~~~~~G~l~dr~~Grk~~~~~~~~~--~~i~~~~~------~~~~~~~~l~~~r~l~G~~~ 183 (525)
+++..-++..+ |.+.-.+|.+.+.++-+. +||...+..+.= +.-...+| .+-.+-+++++.-.+.|+..
T Consensus 280 ~~~y~~~~~~l~fN~~d~vG~~~a~~~~~~--~~r~l~i~v~lR~lfiPlF~~cn~~~~~v~~~~~~~~~~l~~~lglsn 357 (406)
T KOG1479|consen 280 GDWYALLLVFLSFNVFDLIGSILAALLTWP--DPRKLTIPVLLRLLFIPLFLLCNYPPLPVVFESDGWFIFLMSLLGLSN 357 (406)
T ss_pred chhhHHHHHHHHhHHHHHhhhhhhhcccCC--CCceehHHHHHHHHHHHHHHHhccCCCCceecCchHHHHHHHHHHhcc
Confidence 45566666777 999999998888888776 566554443322 22222211 22357788899999999999
Q ss_pred cchhhhhheeeEeeecCcchhhHHhHHHHHHHHHHHHHHHHHHh
Q 041759 184 ATIGTCTIVLLTEKVGTEWRGLVGILDSFFFTIGTLTLPAIAYT 227 (525)
Q Consensus 184 ~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~l~~~l~~~ 227 (525)
|=.......+..+-.+++++..+..+.......|...|.+++++
T Consensus 358 GYltsl~m~~aPk~v~~~e~e~aG~~m~~fl~~Gl~~G~~~s~l 401 (406)
T KOG1479|consen 358 GYLTSLIMMYAPKQVKPSEKEAAGNLMVFFLVGGLALGSLLSWV 401 (406)
T ss_pred chHhhheehhcCCCCChHHHHHHHHHHHHHHHHHHHHhhHHHHH
Confidence 98888888899999999999999999999999999999888765
No 292
>PF06779 DUF1228: Protein of unknown function (DUF1228); InterPro: IPR010645 This entry represents the N terminus of several putative bacterial membrane proteins, which may be sugar transporters. Note that many members are hypothetical proteins.
Probab=94.63 E-value=0.09 Score=38.32 Aligned_cols=67 Identities=7% Similarity=0.030 Sum_probs=57.8
Q ss_pred hhhhcccccCChhHHHHHHHHHhcccccccCchhHHHHHHHHHhhcChhHHHHHHHHHHHHHHHHHHhccc
Q 041759 343 GMTLGIENLGFDIYLGVVFNALLEIPNLASTIPSFFLTFFLIQKWNRKSSLLVLFIISGICSIMAVVANDI 413 (525)
Q Consensus 343 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~d~~g~~~~~~~~~~~~~~~~~~~~~~~~~ 413 (525)
.+|...++.+++....+.+.+...+ |.++|.+...++.++.++++.+..+.+...+..+.+.+..+.
T Consensus 14 lLP~M~~~~~ls~~~ag~lasaNy~----GYL~GAl~~~~~~~~~~~~~~~~~~l~~~~~~~~~ma~~~~~ 80 (85)
T PF06779_consen 14 LLPLMQADGGLSLSQAGWLASANYL----GYLVGALLASRLPRHSRPRRLLRAGLLLTVLSTAAMALTHSF 80 (85)
T ss_pred HhHHHHHhcCCCHHHHHHHHHHHHH----HHHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHHHHHhch
Confidence 4588888999999999999888777 888999999999888888889999999999988888877655
No 293
>KOG2601 consensus Iron transporter [Inorganic ion transport and metabolism]
Probab=92.40 E-value=5.9 Score=37.87 Aligned_cols=40 Identities=13% Similarity=0.038 Sum_probs=31.2
Q ss_pred HHHHHHhhhccccCcchhhhhhHHHHHHHHHHHHHHHHHH
Q 041759 435 AYTVIFIYAIELFPTCVRNSATSIMRLAIIFAAIFSSVLV 474 (525)
Q Consensus 435 ~~~~~~~~~~~~~p~~~r~~~~~~~~~~~~~g~~~~p~i~ 474 (525)
.-....-...|..|+..|..+.|+.+..+..-.++.-++.
T Consensus 403 fDlAVtqimQe~VpEseR~vv~gvqnsL~~~ldll~~ilv 442 (503)
T KOG2601|consen 403 FDLAVTQIMQETVPESERCVVFGVQNSLNSALDLLKDILV 442 (503)
T ss_pred ccHHHHHHHHHhcchhhhhhhHhHHHHHHHHHHHHHHhEE
Confidence 3345666778999999999999999999877776655554
No 294
>COG3202 ATP/ADP translocase [Energy production and conversion]
Probab=92.33 E-value=9.5 Score=37.98 Aligned_cols=149 Identities=10% Similarity=-0.012 Sum_probs=81.1
Q ss_pred HHHHHHHHHHHHHHHHHHhhhhhcccccCC---hhHHHHHHHHHhcccccccCchhHHHHHHHHHhhcChhHHHHHHHHH
Q 041759 324 LERTLALMVPGFGIGVVYYGMTLGIENLGF---DIYLGVVFNALLEIPNLASTIPSFFLTFFLIQKWNRKSSLLVLFIIS 400 (525)
Q Consensus 324 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~d~~g~~~~~~~~~~~~ 400 (525)
+...+-..+..++..+.+..+-..-+.+.. ++.....+-...-+| ++++..++..++.+++.+.+++.......
T Consensus 26 ~~kflpl~Ll~f~I~~ny~~lR~lKDslvv~~~gae~I~FlK~~~vlP---~avif~~iy~kl~~~lt~~~vF~~~~~~F 102 (509)
T COG3202 26 LKKFLPLALLFFCILFNYNLLRSLKDSLVVTRQGAESISFLKTWGVLP---SAVIFTIIYQKLLNILTREKVFYIILGFF 102 (509)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhhheEeecCcchhhHHHHHHHhch---HHHHHHHHHHHHHhhcCHHHHHHHHHHHH
Confidence 344455555556666666655443333222 222222222222221 12256667777888888888776655555
Q ss_pred HHHHHHHHHhcccc------------------c----------cchhHHHHHHHHHHHHHHHHHH-HHHhhhccccCcch
Q 041759 401 GICSIMAVVANDIS------------------N----------AGKRMRIGLELASLFSAYIAYT-VIFIYAIELFPTCV 451 (525)
Q Consensus 401 ~~~~~~~~~~~~~~------------------~----------~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~p~~~ 451 (525)
...++++++.-.+. . +.| ...+..+..-.-.....+ +.+..+.|+...++
T Consensus 103 ~~fF~LFa~Vi~P~~~~~hp~~~~~~~~~~~~p~~l~~~ili~~~W-s~s~~Yi~aELWgslV~S~lFw~faNeitt~~e 181 (509)
T COG3202 103 LGFFALFAFVIYPYKDILHPDPEFSRDLFADLPMFLKWFILIVGEW-SYSLFYIMAELWGSLVLSLLFWQFANEITTIEE 181 (509)
T ss_pred HHHHHHHHHHHhccccccCCCHHHHHHHHhhCCccceeeeEeecch-HHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHH
Confidence 55544444332100 0 012 111222222222222233 67889999999999
Q ss_pred hhhhhHHHHHHHHHHHHHHHHHHhh
Q 041759 452 RNSATSIMRLAIIFAAIFSSVLVAA 476 (525)
Q Consensus 452 r~~~~~~~~~~~~~g~~~~p~i~~~ 476 (525)
..+-.++.+...+++.+++..+..+
T Consensus 182 akRFy~lf~l~~ni~lllsg~~~~~ 206 (509)
T COG3202 182 AKRFYPLFGLGANISLLLSGEVTSW 206 (509)
T ss_pred hhhhHHHHHHHHHHHHHHHHHHHHH
Confidence 8999999999999998887777653
No 295
>KOG4332 consensus Predicted sugar transporter [Carbohydrate transport and metabolism]
Probab=91.07 E-value=1.6 Score=39.39 Aligned_cols=131 Identities=12% Similarity=-0.012 Sum_probs=82.8
Q ss_pred hhhhHHHHHHHHHHHhHHhhHhcccccCCch--HHHHHHHHHHHHHHHHHHhh----h---hHHHHHHHHHHHhhcccch
Q 041759 116 IKGLPAASHFTGCLLGIVFLATLADSSLGRK--NLLFLSCLTMSVATSLTIFS----N---NLWIYSLLRFFSGISRATI 186 (525)
Q Consensus 116 ~~g~~~s~~~lg~~~~~~~~G~l~dr~~Grk--~~~~~~~~~~~i~~~~~~~~----~---~~~~l~~~r~l~G~~~~~~ 186 (525)
--|.+.+.++++..+|+-+..++..| -..| ..+.+..++.+....+.... + +...-+++.++.-.+.|..
T Consensus 283 PhGfiFatFMlASmLGSSla~Rl~s~-s~~~ve~ymqivf~vs~a~l~Lpilt~~vsP~kes~~~s~i~F~~~E~cvGlf 361 (454)
T KOG4332|consen 283 PHGFIFATFMLASMLGSSLASRLLSR-SSPKVESYMQIVFLVSIAALLLPILTSSVSPSKESPSESLIGFCLFEACVGLF 361 (454)
T ss_pred CchhHHHHHHHHHHHhhHHHHHHHhc-CCcccchHHHHHHHHHHHHHHHHHHHhccCCCcCCchHHHHHHHHHHHHHhhc
Confidence 35889999999999999999999888 4443 45556555555544443332 1 1222244555556677788
Q ss_pred hhhhheeeEeeecCcchhhHHhHHHHHHHHHHHHHHHHHHhc--cCCchHHHHHHHHHHHHHHH
Q 041759 187 GTCTIVLLTEKVGTEWRGLVGILDSFFFTIGTLTLPAIAYTN--RSSSWTIIYLWTSIPTLVYS 248 (525)
Q Consensus 187 ~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~l~~~l~~~~--~~~~wr~~f~~~~~~~~~~~ 248 (525)
+|....+=+++.|.+.|...+.++..--++=..++-.. .-. ...+-|..|-++.....+..
T Consensus 362 wPSimkmRsqyIPEearstimNfFRvPLnifvClvLyn-lh~~~~p~~tr~mf~icS~~~~~a~ 424 (454)
T KOG4332|consen 362 WPSIMKMRSQYIPEEARSTIMNFFRVPLNIFVCLVLYN-LHVDAFPTTTRNMFGICSAFLFVAS 424 (454)
T ss_pred chHHHHHHHhhCCHHHHhhhhhheechhhHhhhhhhee-cccccCccccchhhhhhHHHHHHHH
Confidence 99999988999999999888877654333222221111 001 12356677777776666554
No 296
>PF01733 Nucleoside_tran: Nucleoside transporter; InterPro: IPR002259 Delayed-early response (DER) gene products include growth progression factors and several unknown products of novel cDNAs. Murine and human cDNAs from one novel DER gene (DER12) have been characterised to identify its product and to examine its role in the growth response []. Both sequences encode a hydrophobic 36kDa protein that is predicted to contain 8 transmembrane (TM) domains. The protein has been localised to the nucleolus, where its concentration increases following mitogen stimulation []. Although the function of the protein is unknown, its identification as a nucleolar gene transcriptionally activated by growth factors implicates it as participating in the proliferative response []. Sequence analysis reveals the protein to share a high degree of similarity with the C-terminal portion of equilibrative nucleoside transporters. These proteins are integral membrane proteins which enable the movement of hydrophilic nucleosides and nucleoside analogs down their concentration gradients across cell membranes. ENT family members have been identified in humans, mice, fish, tunicates, slime molds, and bacteria []. ; GO: 0005337 nucleoside transmembrane transporter activity, 0006810 transport, 0016020 membrane; PDB: 1HXI_A.
Probab=88.74 E-value=0.14 Score=48.50 Aligned_cols=110 Identities=17% Similarity=0.191 Sum_probs=3.8
Q ss_pred hHHHHHHHHHHHhHHhhHhcccccCCchHHHHHHH--HHHHHHHHHH----------HhhhhHHHHHHHHHHHhhcccch
Q 041759 119 LPAASHFTGCLLGIVFLATLADSSLGRKNLLFLSC--LTMSVATSLT----------IFSNNLWIYSLLRFFSGISRATI 186 (525)
Q Consensus 119 ~~~s~~~lg~~~~~~~~G~l~dr~~Grk~~~~~~~--~~~~i~~~~~----------~~~~~~~~l~~~r~l~G~~~~~~ 186 (525)
.+..+|.++-.+|....++.-=+...+|.++..+. +++.-..+++ .+.+|-+..++.-++.|+..|-.
T Consensus 186 ~~fl~Fn~gD~iGR~l~~~~~~~~~~~~~l~~~s~~R~~fiPlf~~cn~~p~~~~~~~~~~~d~~~~i~~~l~g~TNGyl 265 (309)
T PF01733_consen 186 VLFLLFNLGDFIGRFLASWPRWPGPSPRWLWILSLLRFLFIPLFLLCNVQPRPRYLPVLFNSDAWFIILMLLFGFTNGYL 265 (309)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred HHHHHHHHHHHhcchhcceeEecccccccHHHHHHHHHHHHHHHHHHHhhcccccCCCcccchHHHHHHHHHHHHccchh
Confidence 45678889999988877764211012444333211 2222222222 12345677888899999999999
Q ss_pred hhhhheeeEeeecCcchhhHHhHHHHHHHHHHHHHHHHHHhc
Q 041759 187 GTCTIVLLTEKVGTEWRGLVGILDSFFFTIGTLTLPAIAYTN 228 (525)
Q Consensus 187 ~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~l~~~l~~~~ 228 (525)
......+..+..++++|..+..+...+..+|..+|..++.++
T Consensus 266 ~tl~m~~~p~~v~~~e~e~aG~~~~~~L~~Gl~~Gs~ls~~~ 307 (309)
T PF01733_consen 266 STLAMMYAPKSVSPEERELAGSVMSFFLSFGLFIGSVLSFLL 307 (309)
T ss_dssp -HHHH-------------------------------------
T ss_pred hhceeeeCCCcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 999999999999999999999999999999999998887654
No 297
>KOG3574 consensus Acetyl-CoA transporter [Inorganic ion transport and metabolism]
Probab=86.77 E-value=32 Score=33.36 Aligned_cols=127 Identities=13% Similarity=0.112 Sum_probs=58.2
Q ss_pred HHHHhhhhhcccccCChhHHHHHHHHHhcccccccCchhHHHHHHHHH-----hhcChhHHHH-HHHHHHHHHHHHHHhc
Q 041759 338 GVVYYGMTLGIENLGFDIYLGVVFNALLEIPNLASTIPSFFLTFFLIQ-----KWNRKSSLLV-LFIISGICSIMAVVAN 411 (525)
Q Consensus 338 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~d-----~~g~~~~~~~-~~~~~~~~~~~~~~~~ 411 (525)
+... .+|++++.-+.+....+.. ++..-|. .-.++...++| |+|||+..++ +..+.+..+..+....
T Consensus 48 GL~~-~iP~lL~ak~vSyt~~a~f-S~ay~P~-----sLKllWaPiVDs~y~k~~GrrksWvvp~q~llG~~mllLs~~v 120 (510)
T KOG3574|consen 48 GLIG-AIPLLLQAKGVSYTSQAIF-SFAYWPF-----SLKLLWAPIVDSVYSKRFGRRKSWVVPCQYLLGLFMLLLSYLV 120 (510)
T ss_pred hHhh-hhHHHhcCCCcchhhhhhh-hhhhhHH-----HHHHHHHhhhHHHHHHhhccccceeeehHHHHHHHHHHHhhCC
Confidence 4444 7799888766654332222 2222111 23456666777 8998875443 4444555555544432
Q ss_pred ccc----ccchhHHHH--HHHHHHHHHHHHHHHHHhhhccccCcchhhhhhHHHHHHHHHHHHHHH
Q 041759 412 DIS----NAGKRMRIG--LELASLFSAYIAYTVIFIYAIELFPTCVRNSATSIMRLAIIFAAIFSS 471 (525)
Q Consensus 412 ~~~----~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~p~~~r~~~~~~~~~~~~~g~~~~p 471 (525)
+.. ...+...+. ..++.-+....---..-.++..+..++.-|-+..........|.+++-
T Consensus 121 ~~~~g~ng~~p~v~~lt~~f~LLnflaAtQDIAVDgwALtmLs~e~lgyaST~q~Vg~~~GyfL~~ 186 (510)
T KOG3574|consen 121 DRGLGGNGGLPNVVALTLLFLLLNFLAATQDIAVDGWALTMLSRENLGYASTCQSVGQTAGYFLGN 186 (510)
T ss_pred CcccccCCCCcchHHHHHHHHHHHHHHhhhhhhhhHHHHHhcCHhhcCchhHHHHHHHhhhHHhhc
Confidence 210 011111111 222222222222224445555566666655554444444445554443
No 298
>KOG2881 consensus Predicted membrane protein [Function unknown]
Probab=83.92 E-value=17 Score=32.62 Aligned_cols=31 Identities=16% Similarity=0.097 Sum_probs=20.0
Q ss_pred HHHHHHHHhhcChhHHHHHHHHHHHHHHHHH
Q 041759 378 FLTFFLIQKWNRKSSLLVLFIISGICSIMAV 408 (525)
Q Consensus 378 ~~~~~l~d~~g~~~~~~~~~~~~~~~~~~~~ 408 (525)
+-+..++.|+..|++.+++.++..+..+...
T Consensus 258 igGk~lAskIS~rtVt~~ggi~Fi~Fgl~~i 288 (294)
T KOG2881|consen 258 IGGKYLASKISVRTVTLIGGILFIIFGLVYI 288 (294)
T ss_pred hhhHHHhhhheeEEEEEecchhHHHHHHHHH
Confidence 3344677888888877777666655544433
No 299
>KOG3880 consensus Predicted small molecule transporter involved in cellular pH homeostasis (Batten disease protein in human) [General function prediction only]
Probab=82.27 E-value=3.4 Score=38.33 Aligned_cols=113 Identities=14% Similarity=0.071 Sum_probs=77.4
Q ss_pred hhhhhhHHHHHHHHHHHhHHhhHhcccccCCch---HHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHhhcccchhhhh
Q 041759 114 AFIKGLPAASHFTGCLLGIVFLATLADSSLGRK---NLLFLSCLTMSVATSLTIFSNNLWIYSLLRFFSGISRATIGTCT 190 (525)
Q Consensus 114 ~~~~g~~~s~~~lg~~~~~~~~G~l~dr~~Grk---~~~~~~~~~~~i~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~ 190 (525)
+.|.-|....|.+|..++.-- ..+... ..- .++..-.+++.+...+..+.+++|..++.-+.-|+-.|..+.-.
T Consensus 287 ~sqYRwyqvlYQlGVFiSRSS-~~~~~~--p~l~~LailQ~vNl~ff~~~a~~~ftpsi~ivf~lI~~EGLlGGasYVNT 363 (409)
T KOG3880|consen 287 DSQYRWYQVLYQLGVFISRSS-INLFTM--PYLWLLAILQFVNLLFFLLQAWYWFTPSIWIVFALILFEGLLGGASYVNT 363 (409)
T ss_pred hhcchhhheeeeeeEEEEecc-ceEEec--hHHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHhhcCchHHHHH
Confidence 345667777777664433221 111111 100 11222334455555666778999999999999999988888877
Q ss_pred heeeEeeecCcchhhHHhHHHHHHHHHHHHHHHHHHhcc
Q 041759 191 IVLLTEKVGTEWRGLVGILDSFFFTIGTLTLPAIAYTNR 229 (525)
Q Consensus 191 ~~~i~~~~~~~~r~~~~~~~~~~~~~G~~l~~~l~~~~~ 229 (525)
.--+.+-.++++|-.+++....+-++|..++.+++.-+.
T Consensus 364 f~~i~~e~~pd~rEfamsavs~sDS~Gi~lA~~lalplh 402 (409)
T KOG3880|consen 364 FHNIHKETEPDVREFAMSAVSISDSIGIFLAGLLALPLH 402 (409)
T ss_pred HHHHhhcCCchHHHHhHhhheecchhhHHHHHHHhccch
Confidence 777777788899999999999999999999888876554
No 300
>KOG4830 consensus Predicted sugar transporter [Carbohydrate transport and metabolism]
Probab=82.08 E-value=0.45 Score=42.48 Aligned_cols=45 Identities=18% Similarity=0.244 Sum_probs=31.4
Q ss_pred cceeeccccccchhhhhhhHHHHHHHHHHHhHHhhHhcc---------cccCCchHHH
Q 041759 101 LTIISEWGLECSSAFIKGLPAASHFTGCLLGIVFLATLA---------DSSLGRKNLL 149 (525)
Q Consensus 101 ~~i~~~~~~~~~s~~~~g~~~s~~~lg~~~~~~~~G~l~---------dr~~Grk~~~ 149 (525)
--+.++.++ ++.....++-+..+.-++..++.|... || +|||+..
T Consensus 41 llfltqigl---sp~~~AmlML~GQVtda~st~ftGi~~d~nll~~~idr-~G~~~~w 94 (412)
T KOG4830|consen 41 LLFLTQIGL---SPSSRAMLMLIGQVTDAISTPFTGIFSDSNLLPACIDR-IGRRMSW 94 (412)
T ss_pred HHHHHHhcC---CcchhHHHHHhhHHHHHHhcccccccccccccHHHhhh-hcceeee
Confidence 345566677 777777777777777888888777544 46 8888753
No 301
>COG5336 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=76.77 E-value=8.9 Score=29.00 Aligned_cols=44 Identities=16% Similarity=0.167 Sum_probs=29.7
Q ss_pred hhhhhHHHHHHHHHHHhHHhhHhcccccCCchHHHHHHHHHHHH
Q 041759 115 FIKGLPAASHFTGCLLGIVFLATLADSSLGRKNLLFLSCLTMSV 158 (525)
Q Consensus 115 ~~~g~~~s~~~lg~~~~~~~~G~l~dr~~Grk~~~~~~~~~~~i 158 (525)
...+.-.++-+++..+.....||+.||.+|.++..++..++.+.
T Consensus 42 ~~~a~klssefIsGilVGa~iG~llD~~agTsPwglIv~lllGf 85 (116)
T COG5336 42 YAQAFKLSSEFISGILVGAGIGWLLDKFAGTSPWGLIVFLLLGF 85 (116)
T ss_pred hhhhHHHHHHHHHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHHH
Confidence 33445556777777777788899999955777766655544443
No 302
>PF07672 MFS_Mycoplasma: Mycoplasma MFS transporter; InterPro: IPR011699 These proteins share some similarity with members of the Major Facilitator Superfamily (MFS).
Probab=73.86 E-value=24 Score=32.09 Aligned_cols=106 Identities=15% Similarity=0.210 Sum_probs=61.1
Q ss_pred hhhhHHHHHHHHHHHhHHhhHhcccccCCchHHHH----HHHHHHHHHHHHHHh-h----hhHHHHHHHHHHHhhcccch
Q 041759 116 IKGLPAASHFTGCLLGIVFLATLADSSLGRKNLLF----LSCLTMSVATSLTIF-S----NNLWIYSLLRFFSGISRATI 186 (525)
Q Consensus 116 ~~g~~~s~~~lg~~~~~~~~G~l~dr~~Grk~~~~----~~~~~~~i~~~~~~~-~----~~~~~l~~~r~l~G~~~~~~ 186 (525)
......-++..|..+|.+..|+.....+-||+.+. .+.+++.++.+.... . .++..+++.-++.|+..=+.
T Consensus 142 ~~~~~~I~fv~g~~~G~~~ig~~nkt~~kRk~fi~~~~~~gi~~~~l~~~~~~~~g~~~~~~~~~f~I~~Fl~G~f~Wgi 221 (267)
T PF07672_consen 142 IIPIFQILFVAGYFLGPFTIGLWNKTNYKRKPFIHFIISLGIVFFVLSIVVVYFVGPGNAAGFAFFYIFGFLAGFFLWGI 221 (267)
T ss_pred hhHHHHHHHHHHHhhhceeeccchhhhhhhhhHHHHHHHHHHHHHHHHHHHHHHhCcchHHHHHHHHHHHHHHHHHHHhh
Confidence 34455566777777787888888775466776554 344555555554322 1 24667777888888776444
Q ss_pred hhhhheeeEeeecCcchhhHHhHHHHHHHHHHHHHH
Q 041759 187 GTCTIVLLTEKVGTEWRGLVGILDSFFFTIGTLTLP 222 (525)
Q Consensus 187 ~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~l~~ 222 (525)
.++....=.| ++...+.+..-.++..+++|.++-.
T Consensus 222 Q~ViL~lPhE-yK~~~pk~ig~~Fg~iWGfGY~~yT 256 (267)
T PF07672_consen 222 QGVILNLPHE-YKGYNPKKIGIQFGLIWGFGYIFYT 256 (267)
T ss_pred hHHHhcChhh-hcCCCcceehhHHHHHHHHHHHHHH
Confidence 4444433333 3333444455555666677766543
No 303
>COG5336 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=71.25 E-value=8.4 Score=29.13 Aligned_cols=32 Identities=16% Similarity=0.140 Sum_probs=18.9
Q ss_pred hhHHHHHHHHHhh-cChhHHHHHHHHHHHHHHH
Q 041759 375 PSFFLTFFLIQKW-NRKSSLLVLFIISGICSIM 406 (525)
Q Consensus 375 ~~~~~~~~l~d~~-g~~~~~~~~~~~~~~~~~~ 406 (525)
+.....||+.||+ |.+++.++.+++...+..+
T Consensus 57 lVGa~iG~llD~~agTsPwglIv~lllGf~AG~ 89 (116)
T COG5336 57 LVGAGIGWLLDKFAGTSPWGLIVFLLLGFGAGV 89 (116)
T ss_pred HHHHHHHHHHHHhcCCCcHHHHHHHHHHHHHHH
Confidence 3445668899996 6666655555544444333
No 304
>PF09527 ATPase_gene1: Putative F0F1-ATPase subunit (ATPase_gene1)
Probab=68.31 E-value=18 Score=23.75 Aligned_cols=38 Identities=21% Similarity=0.209 Sum_probs=25.6
Q ss_pred HHHHHHHHHhHHhhHhcccccCCchHHHHHHHHHHHHH
Q 041759 122 ASHFTGCLLGIVFLATLADSSLGRKNLLFLSCLTMSVA 159 (525)
Q Consensus 122 s~~~lg~~~~~~~~G~l~dr~~Grk~~~~~~~~~~~i~ 159 (525)
....++..+.....|+..|+++|.++...+..++.++.
T Consensus 7 g~~~~~~i~~g~~~G~~lD~~~~t~p~~~~~g~llG~~ 44 (55)
T PF09527_consen 7 GFTMAAPILVGFFLGYWLDKWFGTSPWFTLIGLLLGIA 44 (55)
T ss_pred HHHHHHHHHHHHHHHHHHHHHcCCChHHHHHHHHHHHH
Confidence 44555666677788999998788877666555554443
No 305
>TIGR02230 ATPase_gene1 F0F1-ATPase subunit, putative. This model represents a protein found encoded in F1F0-ATPase operons in several genomes, including Methanosarcina barkeri (archaeal) and Chlorobium tepidum (bacterial). It is a small protein (about 100 amino acids) with long hydrophic stretches and is presumed to be a subunit of the enzyme.
Probab=65.92 E-value=17 Score=27.42 Aligned_cols=36 Identities=17% Similarity=-0.045 Sum_probs=22.7
Q ss_pred HHHHHHHhHHhhHhcccccCCchHHHHHHHHHHHHH
Q 041759 124 HFTGCLLGIVFLATLADSSLGRKNLLFLSCLTMSVA 159 (525)
Q Consensus 124 ~~lg~~~~~~~~G~l~dr~~Grk~~~~~~~~~~~i~ 159 (525)
.++...+...+.|...|+++|-++.+.+.+++.+++
T Consensus 51 ~~v~pil~G~~lG~WLD~~~~t~~~~tl~~lllGv~ 86 (100)
T TIGR02230 51 SVAIPTLLGVAVGIWLDRHYPSPFSWTLTMLIVGVV 86 (100)
T ss_pred HHHHHHHHHHHHHHHHHhhcCCCcHHHHHHHHHHHH
Confidence 344445555677888887688777666555555443
No 306
>KOG1237 consensus H+/oligopeptide symporter [Amino acid transport and metabolism]
Probab=65.47 E-value=82 Score=32.81 Aligned_cols=126 Identities=11% Similarity=0.063 Sum_probs=73.2
Q ss_pred hhHHHHHHHHHhh-cChhHHHHHHHHHHHHHHHHHHhcccc-----------c-------c--chhHHHHHHHHHHHHHH
Q 041759 375 PSFFLTFFLIQKW-NRKSSLLVLFIISGICSIMAVVANDIS-----------N-------A--GKRMRIGLELASLFSAY 433 (525)
Q Consensus 375 ~~~~~~~~l~d~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~-----------~-------~--~~~~~~~~~~~~~~~~~ 433 (525)
...+++++++|.+ ||-+.+.++.++..++..++......+ . . ....++....+...+.+
T Consensus 88 ~~~l~g~~laD~f~gry~tI~~~s~i~~~G~~~lt~~a~~~~l~p~~~~~~~~~~~c~~~s~~q~~~~~~~l~lia~G~g 167 (571)
T KOG1237|consen 88 LLPLLGAFLADSFLGRYFTINIGSLISLLGLFGLTLSAMIPALLPFMCKFKPGGNVCESPSKLQLAVLYGALYLIALGAG 167 (571)
T ss_pred HHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCccccCCCCCCcccCcchHHHHHHHHHHHHheeccC
Confidence 4667888999985 888888888888777765555432110 0 0 01123333334444555
Q ss_pred HHHHHHHhhhccccCc----chhh--hhhHHHHHHHHHHHHHHHHHHhh--ccCchhHHHHHHHHHHHHHHHHHH
Q 041759 434 IAYTVIFIYAIELFPT----CVRN--SATSIMRLAIIFAAIFSSVLVAA--GSNNEFVSYGVFGLVIICCGFFVI 500 (525)
Q Consensus 434 ~~~~~~~~~~~~~~p~----~~r~--~~~~~~~~~~~~g~~~~p~i~~~--~~~~~~~~~~~~~~~~~~~~~~~~ 500 (525)
+.-+...++.+|-++. +.+. .-+.......++|.+++-.+.-+ ...++...|.+..++..++.++.+
T Consensus 168 g~r~~~~~fGadQfd~~~~~~~~~~~~fFnW~yf~~~~g~l~a~t~~vyiq~~~~w~lgf~i~~~~~~lai~iF~ 242 (571)
T KOG1237|consen 168 GIRPCLLAFGADQFDELDPVEVKGIPSFFNWFYFSQNGGALLAQTVLVYIQDNVGWKLGFGIPTVLNALAILIFL 242 (571)
T ss_pred CCCCcchhhcccccCccCcchhhCcccchhHHHHHHHHHHHHHHHHHHhhhhcccceeeccHHHHHHHHHHHHHH
Confidence 5566777787887772 2222 44455555557777766555543 344566667776666666555443
No 307
>PF06912 DUF1275: Protein of unknown function (DUF1275); InterPro: IPR010699 This family consists of several hypothetical bacterial proteins of around 200 residues in length. The function of this family is unknown although a few members are thought to be membrane proteins.
Probab=63.42 E-value=1e+02 Score=27.01 Aligned_cols=37 Identities=11% Similarity=0.135 Sum_probs=16.5
Q ss_pred HHHHHHHHHhHHhhHhc---ccccCCchHHHHHHHHHHHHH
Q 041759 122 ASHFTGCLLGIVFLATL---ADSSLGRKNLLFLSCLTMSVA 159 (525)
Q Consensus 122 s~~~lg~~~~~~~~G~l---~dr~~Grk~~~~~~~~~~~i~ 159 (525)
....++..+|....+.+ .++ ..+|+.....+.+..+.
T Consensus 53 ~~~i~~F~~G~~~~~~i~~~~~~-~~~~~~~~~~l~~~~~l 92 (209)
T PF06912_consen 53 LLAILSFILGAFLAGLIVRRSRR-RRRRRWYRILLLLEAIL 92 (209)
T ss_pred HHHHHHHHHHHHHHHHHHHhccc-cchhHHHHHHHHHHHHH
Confidence 33444445555555555 223 34444444444443333
No 308
>KOG3810 consensus Micronutrient transporters (folate transporter family) [Coenzyme transport and metabolism]
Probab=62.66 E-value=10 Score=35.94 Aligned_cols=99 Identities=13% Similarity=0.079 Sum_probs=73.0
Q ss_pred hhhhhhHHHHHHHHHHHhHHhhHhcccccCCchH--HHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHhhcccchhhhhh
Q 041759 114 AFIKGLPAASHFTGCLLGIVFLATLADSSLGRKN--LLFLSCLTMSVATSLTIFSNNLWIYSLLRFFSGISRATIGTCTI 191 (525)
Q Consensus 114 ~~~~g~~~s~~~lg~~~~~~~~G~l~dr~~Grk~--~~~~~~~~~~i~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~ 191 (525)
...-|..-++..+..+++.+..|.+--+ +.|.. .+.++.+..+...++++.+++.|...++.++.+.......+++.
T Consensus 270 ~vyNG~veAv~tlLGa~~~~~~g~l~i~-w~r~g~~ll~~~s~~~agllf~m~~t~~Iw~~Ya~yvlfr~~y~l~itiA~ 348 (433)
T KOG3810|consen 270 NVYNGAVEAVSTLLGAIAALAAGYLNIN-WNRWGDLLLAVGSAVQAGLLFIMAQTQHIWVCYAGYVLFRVIYQLTITIAT 348 (433)
T ss_pred hhhcCHHHHHHHHHHHHHHHHHHheeec-cchhhHHHHHHHHHHhhhhhhhhhcccceehhhhhHHHHHhhHhhhhhHHH
Confidence 3445667778888889999999999887 77653 44455555666666677788888888888777777777777777
Q ss_pred eeeEeeecCcchhhHHhHHHHH
Q 041759 192 VLLTEKVGTEWRGLVGILDSFF 213 (525)
Q Consensus 192 ~~i~~~~~~~~r~~~~~~~~~~ 213 (525)
.-+++....+.-|..+|+....
T Consensus 349 ~~iA~nL~~e~~gLvFGiNTFv 370 (433)
T KOG3810|consen 349 FQIARNLSSELFGLVFGINTFV 370 (433)
T ss_pred HHHHHhhhhhhheeeeehHHHH
Confidence 7777777777778888776543
No 309
>COG4262 Predicted spermidine synthase with an N-terminal membrane domain [General function prediction only]
Probab=62.01 E-value=70 Score=30.59 Aligned_cols=83 Identities=12% Similarity=0.082 Sum_probs=57.4
Q ss_pred hhhhhhhHHHHHHHHHHHhHHhhHhcccccCCchHHHHHHHHHHHHH-----HHHHHhh----hhHHHHHHHHHHHhhcc
Q 041759 113 SAFIKGLPAASHFTGCLLGIVFLATLADSSLGRKNLLFLSCLTMSVA-----TSLTIFS----NNLWIYSLLRFFSGISR 183 (525)
Q Consensus 113 s~~~~g~~~s~~~lg~~~~~~~~G~l~dr~~Grk~~~~~~~~~~~i~-----~~~~~~~----~~~~~l~~~r~l~G~~~ 183 (525)
+--+.+.+++.|...+.+|+...-++.|- --.-+.+..-+++..++ .+-..|+ ++-+.+.+.-++.|.-.
T Consensus 41 ~Ilq~S~Iia~yl~amGlGs~~sry~~dd-~~~~~Fv~vElllgligg~Sa~~ly~~FA~~~~~~~~Vly~lt~vIG~LV 119 (508)
T COG4262 41 GILQTSLIIAGYLAAMGLGSLLSRYVLDD-AALARFVDVELLLGLIGGVSAAALYLLFALESAPSRLVLYALTAVIGVLV 119 (508)
T ss_pred ceeehHHHHHHHHHHhchhhhhhccccCc-hHHHHHHHHHHHHHHhccchHHHHHHHHHhccchHHHHHHHHHHHHHHHH
Confidence 55678999999999999999999988886 33332222222222111 1111233 46788888999999999
Q ss_pred cchhhhhheeeEe
Q 041759 184 ATIGTCTIVLLTE 196 (525)
Q Consensus 184 ~~~~~~~~~~i~~ 196 (525)
|...|..+.++..
T Consensus 120 G~EiPL~mrml~~ 132 (508)
T COG4262 120 GAEIPLLMRMLQR 132 (508)
T ss_pred hcchHHHHHHHHH
Confidence 9999998887765
No 310
>PF11299 DUF3100: Protein of unknown function (DUF3100); InterPro: IPR021450 Some members in this family of proteins are annotated as membrane proteins however this cannot be confirmed. Currently no function is known.
Probab=52.70 E-value=6.6 Score=34.53 Aligned_cols=107 Identities=15% Similarity=0.152 Sum_probs=68.5
Q ss_pred ecCCCCccccceeeccccccchhhhhhhHHHHHHHHHHHhHHhhHhcccccCCchHHHHHHHHHHHHHHHHHHhhhhHHH
Q 041759 92 WDGNPTTTALTIISEWGLECSSAFIKGLPAASHFTGCLLGIVFLATLADSSLGRKNLLFLSCLTMSVATSLTIFSNNLWI 171 (525)
Q Consensus 92 ~~~~p~~~~~~i~~~~~~~~~s~~~~g~~~s~~~lg~~~~~~~~G~l~dr~~Grk~~~~~~~~~~~i~~~~~~~~~~~~~ 171 (525)
-+.+|. +.-+.+.||+ ++.+--=+.+.|.+|..+|.++.+.++.- +.. + +...
T Consensus 121 I~REp~--laiI~ekYGl---dSpEgrGVl~~Yi~GTvfGtiffsllas~-~a~-------------------~--~~fh 173 (241)
T PF11299_consen 121 IGREPN--LAIISEKYGL---DSPEGRGVLGVYIIGTVFGTIFFSLLASL-LAS-------------------L--GIFH 173 (241)
T ss_pred cccCcc--eeeeehhcCC---CCccccceEEEeeehhhHHHHHHHHHHHH-HHh-------------------c--cCCC
Confidence 334577 8889999999 66665556788888888888887776653 110 0 0001
Q ss_pred HHHHHHHHhhcccchhhhhheeeEeeecCcchhhHHhHHHHHHHHHHHHHHHHHH
Q 041759 172 YSLLRFFSGISRATIGTCTIVLLTEKVGTEWRGLVGILDSFFFTIGTLTLPAIAY 226 (525)
Q Consensus 172 l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~l~~~l~~ 226 (525)
=...-.-.|+|.|..+..+..-+.+.+| +......++-.+.+-+..+.|..+..
T Consensus 174 P~ALAMasGvGSgSMMaAa~~aL~~~~P-~~a~~i~A~AaaSNllt~~~G~Y~~i 227 (241)
T PF11299_consen 174 PYALAMASGVGSGSMMAAASGALAAAYP-EMADQILAFAAASNLLTSVTGLYMSI 227 (241)
T ss_pred HHHHHHHcCCcHHHHHHHHHHHHHHHCc-chHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 1122334588888888888887888886 44555666666666666666554433
No 311
>COG4262 Predicted spermidine synthase with an N-terminal membrane domain [General function prediction only]
Probab=52.37 E-value=2.3e+02 Score=27.39 Aligned_cols=28 Identities=4% Similarity=-0.117 Sum_probs=19.8
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHhhhcc
Q 041759 418 KRMRIGLELASLFSAYIAYTVIFIYAIE 445 (525)
Q Consensus 418 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 445 (525)
...+++...+.|...+.=.|..+.+...
T Consensus 105 ~~Vly~lt~vIG~LVG~EiPL~mrml~~ 132 (508)
T COG4262 105 RLVLYALTAVIGVLVGAEIPLLMRMLQR 132 (508)
T ss_pred HHHHHHHHHHHHHHHhcchHHHHHHHHH
Confidence 3466677777777777777877777665
No 312
>PF11947 DUF3464: Protein of unknown function (DUF3464); InterPro: IPR021855 This family of proteins are functionally uncharacterised. This protein is found in bacteria and eukaryotes. Proteins in this family are typically between 137 to 196 amino acids in length.
Probab=49.28 E-value=1.4e+02 Score=24.74 Aligned_cols=36 Identities=3% Similarity=-0.082 Sum_probs=27.5
Q ss_pred HHHHHHHhhhccccCcchhhhhhHHHHHHHHHHHHH
Q 041759 434 IAYTVIFIYAIELFPTCVRNSATSIMRLAIIFAAIF 469 (525)
Q Consensus 434 ~~~~~~~~~~~~~~p~~~r~~~~~~~~~~~~~g~~~ 469 (525)
+...+.|.+++...+++..|+..|+-.+-.+++.+.
T Consensus 110 gllGisYGilSaSWD~~r~GSllG~~e~~~N~~r~~ 145 (153)
T PF11947_consen 110 GLLGISYGILSASWDPEREGSLLGWEEFKRNWGRMW 145 (153)
T ss_pred HHHhhhhhhcccccCCCCCCCcccHHHHHHhHHHHH
Confidence 344677888888888888899999888877776543
No 313
>COG4769 Predicted membrane protein [Function unknown]
Probab=48.12 E-value=20 Score=29.66 Aligned_cols=53 Identities=15% Similarity=0.081 Sum_probs=37.1
Q ss_pred HHHHHHHHhHHhhHhcccccCCchHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHhhc
Q 041759 123 SHFTGCLLGIVFLATLADSSLGRKNLLFLSCLTMSVATSLTIFSNNLWIYSLLRFFSGIS 182 (525)
Q Consensus 123 ~~~lg~~~~~~~~G~l~dr~~Grk~~~~~~~~~~~i~~~~~~~~~~~~~l~~~r~l~G~~ 182 (525)
++.+..++.+...-++..+ +|+|..-.+|.- ...++.+|..++++.+++.|-.
T Consensus 81 l~sfaG~i~S~L~m~~l~~-f~~k~~S~lgiS------~mGaF~hNl~QLivas~Lv~~~ 133 (181)
T COG4769 81 LYSFAGAILSTLFMYFLYQ-FGPKYLSLLGIS------VMGAFTHNLGQLIVASFLVFTT 133 (181)
T ss_pred HHHHHHHHHHHHHHHHHHH-cCCceEeeeehh------hHHHHHHhHHHHHHHHHHHhcc
Confidence 3445555666667778888 998876554443 3446789999999999987643
No 314
>PF02990 EMP70: Endomembrane protein 70; InterPro: IPR004240 The transmembrane 9 superfamily protein (TM9SF) may function as a channel or small molecule transporter. Proteins in this group are endosomal integral membrane proteins.; GO: 0016021 integral to membrane
Probab=39.76 E-value=1.6e+02 Score=30.34 Aligned_cols=19 Identities=11% Similarity=0.200 Sum_probs=12.4
Q ss_pred cCchhHHHHHHHHHhhcCh
Q 041759 372 STIPSFFLTFFLIQKWNRK 390 (525)
Q Consensus 372 ~~~~~~~~~~~l~d~~g~~ 390 (525)
.+.+++..++++-..++.+
T Consensus 309 ~~~iaGy~S~~~yk~~~g~ 327 (521)
T PF02990_consen 309 TSFIAGYVSARLYKSFGGK 327 (521)
T ss_pred HhhHHHHHHHHHHHHcCCC
Confidence 3447777777777777543
No 315
>KOG3097 consensus Predicted membrane protein [Function unknown]
Probab=38.81 E-value=1.1e+02 Score=29.12 Aligned_cols=66 Identities=11% Similarity=0.010 Sum_probs=41.6
Q ss_pred hhHHHHHHHHHhhcChhHHHHHHHHHHHHHHHHHHhccccccchhHHHHHHHHHHHHHHHHHHHHHhhhccc
Q 041759 375 PSFFLTFFLIQKWNRKSSLLVLFIISGICSIMAVVANDISNAGKRMRIGLELASLFSAYIAYTVIFIYAIEL 446 (525)
Q Consensus 375 ~~~~~~~~l~d~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 446 (525)
...++.+.+++++|.|..+.++..........-.. ..+...+...+..|++.+..|..--+++++.
T Consensus 73 ~s~m~~~~~Ir~~g~K~tm~lav~~Y~lyiA~Nl~------pr~~tlVPa~~~~G~aa~p~W~SkgtYlT~~ 138 (390)
T KOG3097|consen 73 DSSMFMPLLIRFLGTKWTMVLAVFPYALYIAANLE------PRYETLVPAGLVLGMAAGPIWASKGTYLTPM 138 (390)
T ss_pred HHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHhhcc------hhHHhhccHHHhhccccccccccCcceecHH
Confidence 56666678999999998887776655544332211 1233556666777777777776555555544
No 316
>PF11947 DUF3464: Protein of unknown function (DUF3464); InterPro: IPR021855 This family of proteins are functionally uncharacterised. This protein is found in bacteria and eukaryotes. Proteins in this family are typically between 137 to 196 amino acids in length.
Probab=37.81 E-value=82 Score=26.04 Aligned_cols=50 Identities=14% Similarity=0.096 Sum_probs=31.4
Q ss_pred hHHHHHHHHHHHhhcccchhhhhheeeEeeecCcchhhHHhHHHHHHHHHHHH
Q 041759 168 NLWIYSLLRFFSGISRATIGTCTIVLLTEKVGTEWRGLVGILDSFFFTIGTLT 220 (525)
Q Consensus 168 ~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~l 220 (525)
++..+++.-.+.|+| ...+.+.+++--+++++.|..+|+-.+-.+++-+.
T Consensus 96 ~~~~~~~S~~~Fg~g---llGisYGilSaSWD~~r~GSllG~~e~~~N~~r~~ 145 (153)
T PF11947_consen 96 PWAVLLVSLVFFGLG---LLGISYGILSASWDPEREGSLLGWEEFKRNWGRMW 145 (153)
T ss_pred chHHHHHHHHHHHHH---HHhhhhhhcccccCCCCCCCcccHHHHHHhHHHHH
Confidence 344444444444444 23344555666677888899999988888877654
No 317
>PF06645 SPC12: Microsomal signal peptidase 12 kDa subunit (SPC12); InterPro: IPR009542 This family consists of several microsomal signal peptidase 12 kDa subunit proteins. Translocation of polypeptide chains across the endoplasmic reticulum (ER) membrane is triggered by signal sequences. Subsequently, signal recognition particle interacts with its membrane receptor and the ribosome-bound nascent chain is targeted to the ER where it is transferred into a protein-conducting channel. At some point, a second signal sequence recognition event takes place in the membrane and translocation of the nascent chain through the membrane occurs. The signal sequence of most secretory and membrane proteins is cleaved off at this stage. Cleavage occurs by the signal peptidase complex (SPC) as soon as the lumenal domain of the translocating polypeptide is large enough to expose its cleavage site to the enzyme. The signal peptidase complex is possibly also involved in proteolytic events in the ER membrane other than the processing of the signal sequence, for example the further digestion of the cleaved signal peptide or the degradation of membrane proteins. Mammalian signal peptidase is as a complex of five different polypeptide chains. This family represents the 12 kDa subunit (SPC12).; GO: 0008233 peptidase activity, 0006465 signal peptide processing, 0005787 signal peptidase complex, 0016021 integral to membrane
Probab=34.55 E-value=1.5e+02 Score=21.14 Aligned_cols=49 Identities=12% Similarity=0.240 Sum_probs=32.1
Q ss_pred HHhHHHHHHHHHHHHHHHHHHhccCCchHHHHHHHHHHHHHHHhHhheeecCCc
Q 041759 206 VGILDSFFFTIGTLTLPAIAYTNRSSSWTIIYLWTSIPTLVYSGLLYIFVSESP 259 (525)
Q Consensus 206 ~~~~~~~~~~~G~~l~~~l~~~~~~~~wr~~f~~~~~~~~~~~~~~~~~lpesp 259 (525)
+--+.+....++.+++-++|+... +.+..+++.++-.++.+ ...+|+=|
T Consensus 9 ae~l~~~il~~~~iisfi~Gy~~q--~~~~~~~~~~~g~~~~~---lv~vP~Wp 57 (76)
T PF06645_consen 9 AEKLMQYILIISAIISFIVGYITQ--SFSYTFYIYGAGVVLTL---LVVVPPWP 57 (76)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHH--HHHHHHHHHHHHHHHHH---hheeCCcH
Confidence 344566667778888888888887 77777776666555544 33456544
No 318
>TIGR02230 ATPase_gene1 F0F1-ATPase subunit, putative. This model represents a protein found encoded in F1F0-ATPase operons in several genomes, including Methanosarcina barkeri (archaeal) and Chlorobium tepidum (bacterial). It is a small protein (about 100 amino acids) with long hydrophic stretches and is presumed to be a subunit of the enzyme.
Probab=34.19 E-value=1.8e+02 Score=22.14 Aligned_cols=30 Identities=13% Similarity=0.214 Sum_probs=16.5
Q ss_pred hhHHHHHHHHHhhcChhHHHHHHHHHHHHH
Q 041759 375 PSFFLTFFLIQKWNRKSSLLVLFIISGICS 404 (525)
Q Consensus 375 ~~~~~~~~l~d~~g~~~~~~~~~~~~~~~~ 404 (525)
+|.+++-|+-++++....+.+.+++.+++.
T Consensus 58 ~G~~lG~WLD~~~~t~~~~tl~~lllGv~~ 87 (100)
T TIGR02230 58 LGVAVGIWLDRHYPSPFSWTLTMLIVGVVI 87 (100)
T ss_pred HHHHHHHHHHhhcCCCcHHHHHHHHHHHHH
Confidence 455555566666776655555544444443
No 319
>COG1268 BioY Uncharacterized conserved protein [General function prediction only]
Probab=33.19 E-value=1.2e+02 Score=25.96 Aligned_cols=23 Identities=13% Similarity=0.421 Sum_probs=19.5
Q ss_pred HHHHHHHHHhHHhhHhcccccCCc
Q 041759 122 ASHFTGCLLGIVFLATLADSSLGR 145 (525)
Q Consensus 122 s~~~lg~~~~~~~~G~l~dr~~Gr 145 (525)
.-|.+++.+++.+.|++.|| .-+
T Consensus 89 gGyL~gfi~aa~l~G~l~~k-~~~ 111 (184)
T COG1268 89 GGYLIGFIIAAFLIGLLAEK-IRK 111 (184)
T ss_pred hhHHHHHHHHHHHHHHHHHh-hhc
Confidence 56788889999999999999 654
No 320
>TIGR01666 YCCS hypothetical membrane protein, TIGR01666. This model represents a clade of sequences from gamma and beta proteobacteria. These proteins are 700 amino acids long and many have been annotated as putative membrane proteins. The gene from Salmonella has been annotated as a putative efflux transporter. The gene from E. coli has the name yccS.
Probab=33.16 E-value=3e+02 Score=29.62 Aligned_cols=54 Identities=19% Similarity=0.284 Sum_probs=36.6
Q ss_pred hhHhcccc---cCCchHHHHHHHHHHHHHHHHHHhh-hhHHHHHHHHHHHhhcccchh
Q 041759 134 FLATLADS---SLGRKNLLFLSCLTMSVATSLTIFS-NNLWIYSLLRFFSGISRATIG 187 (525)
Q Consensus 134 ~~G~l~dr---~~Grk~~~~~~~~~~~i~~~~~~~~-~~~~~l~~~r~l~G~~~~~~~ 187 (525)
+.+-++|. .-||.+-++++.+++.++++...+. +..|.+..+-++.+++.++..
T Consensus 42 ia~al~D~d~~~~~R~~~l~~t~~~f~i~sl~v~ll~~~p~lf~~~l~~~tf~~~mlg 99 (704)
T TIGR01666 42 IAAALVDLDDRLTGRLKNVIFTLICFSIASFSVELLFGKPWLFAVGLTVSTFGFIMLG 99 (704)
T ss_pred HhhccCCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHHHH
Confidence 44666775 2467777888888898888887765 445566666677777665443
No 321
>KOG2601 consensus Iron transporter [Inorganic ion transport and metabolism]
Probab=31.97 E-value=5.1e+02 Score=25.51 Aligned_cols=25 Identities=4% Similarity=-0.072 Sum_probs=17.6
Q ss_pred hhHHHHHHHHHhhcChhHHHHHHHH
Q 041759 375 PSFFLTFFLIQKWNRKSSLLVLFII 399 (525)
Q Consensus 375 ~~~~~~~~l~d~~g~~~~~~~~~~~ 399 (525)
+-..+.|...|+..|+|++.....+
T Consensus 78 vlg~ivGq~vDg~sr~Kvi~~~L~l 102 (503)
T KOG2601|consen 78 VLGPIVGQWVDGMSRVKVIQTWLLL 102 (503)
T ss_pred hhHHHHHHHhcchhHHHHHHHHHhh
Confidence 4555667788999998887665544
No 322
>PF06027 DUF914: Eukaryotic protein of unknown function (DUF914); InterPro: IPR009262 This family consists of several hypothetical proteins of unknown function. Some of the sequences in this family are annotated as putative membrane proteins.
Probab=31.64 E-value=4.7e+02 Score=25.08 Aligned_cols=18 Identities=22% Similarity=0.320 Sum_probs=7.3
Q ss_pred cchhHHHHHHHHHHHHHH
Q 041759 319 VRRWALERTLALMVPGFG 336 (525)
Q Consensus 319 ~~~~~~~~~~~~~~~~~~ 336 (525)
+.|..+...+...++..+
T Consensus 128 ~~ry~~~~~~gv~i~i~G 145 (334)
T PF06027_consen 128 KRRYSWFHILGVLICIAG 145 (334)
T ss_pred HhhhhHHHHHHHHHHHhh
Confidence 344334444444444333
No 323
>TIGR01667 YCCS_YHJK integral membrane protein, YccS/YhfK family. TMHMM on members of this model shows a consensus of 11 transmembrane helices separated into two clusters, an N-terminal cluster of 6 and a central cluster of 5. This would indicate two non-membrane domains one on each side of the membrane
Probab=29.26 E-value=4.3e+02 Score=28.52 Aligned_cols=56 Identities=21% Similarity=0.321 Sum_probs=38.0
Q ss_pred HhhHhcccc---cCCchHHHHHHHHHHHHHHHHHHhhh-hHHHHHHHHHHHhhcccchhh
Q 041759 133 VFLATLADS---SLGRKNLLFLSCLTMSVATSLTIFSN-NLWIYSLLRFFSGISRATIGT 188 (525)
Q Consensus 133 ~~~G~l~dr---~~Grk~~~~~~~~~~~i~~~~~~~~~-~~~~l~~~r~l~G~~~~~~~~ 188 (525)
.+.+-++|. .-||.+-++++.++++++++...+.. ..|.+...-++.+++.++...
T Consensus 41 ~ia~~l~D~~~~~~~R~~~l~it~~~f~i~sl~v~ll~~~p~~~~~~l~~~tf~~~mlga 100 (701)
T TIGR01667 41 IIAAGLDDLDDRLTGRLKNLIITLSCFSIASFLVQLLFPKPWLFPFLLTLLTFGFILLGA 100 (701)
T ss_pred hHhhccCCCCccHHHHHHHHHHHHHHHHHHHHHHHHHhcchHHHHHHHHHHHHHHHHHHH
Confidence 345566675 24567888899999999888887664 445666666777776665433
No 324
>PF03547 Mem_trans: Membrane transport protein; InterPro: IPR004776 This entry represents a mostly uncharacterised family of membrane transport proteins found in eukaryotes, bacteria and archaea. Most characterised members of this family are the PIN components of auxin efflux systems from plants. These carriers are saturable, auxin-specific, and localized to the basal ends of auxin transport-competent cells [, ]. Plants typically posses several of these proteins, each displaying a unique tissue-specific expression pattern. They are expressed in almost all plant tissues including vascular tissues and roots, and influence many processes including the establishment of embryonic polarity, plant growth, apical hook formation in seedlings and the photo- and gravitrophic responses. These plant proteins are typically 600-700 amino acyl residues long and exhibit 8-12 transmembrane segments.; GO: 0055085 transmembrane transport, 0016021 integral to membrane
Probab=28.84 E-value=4.9e+02 Score=25.31 Aligned_cols=14 Identities=14% Similarity=0.268 Sum_probs=8.5
Q ss_pred hhHHHHHHHHHhhc
Q 041759 375 PSFFLTFFLIQKWN 388 (525)
Q Consensus 375 ~~~~~~~~l~d~~g 388 (525)
+.....|++..|.+
T Consensus 10 ~~ii~~G~~~~~~~ 23 (385)
T PF03547_consen 10 FLIILLGYLLGRFG 23 (385)
T ss_pred HHHHHHHHHHHHhC
Confidence 44556667777654
No 325
>PTZ00370 STEVOR; Provisional
Probab=28.55 E-value=64 Score=29.56 Aligned_cols=23 Identities=17% Similarity=0.154 Sum_probs=12.1
Q ss_pred HHHHHHHHHHHHHhccCCCCCCc
Q 041759 488 FGLVIICCGFFVICLPETRGSSL 510 (525)
Q Consensus 488 ~~~~~~~~~~~~~~~~~~~~~~~ 510 (525)
+.++.++.++++.|+.++|++++
T Consensus 264 llil~vvliilYiwlyrrRK~sw 286 (296)
T PTZ00370 264 LLILAVVLIILYIWLYRRRKNSW 286 (296)
T ss_pred HHHHHHHHHHHHHHHHHhhcchh
Confidence 33344444456666666555554
No 326
>PF10785 NADH-u_ox-rdase: NADH-ubiquinone oxidoreductase complex I, 21 kDa subunit; InterPro: IPR019721 This domain is found in the N-terminal region of NADH-ubiquinone oxidoreductase 21kDa subunits from plants and fungi [].
Probab=28.26 E-value=2e+02 Score=21.15 Aligned_cols=39 Identities=8% Similarity=-0.098 Sum_probs=26.3
Q ss_pred HhHHhhHhcccccCCc-------hHHHHHHHHHHHHHHHHHHhhhhH
Q 041759 130 LGIVFLATLADSSLGR-------KNLLFLSCLTMSVATSLTIFSNNL 169 (525)
Q Consensus 130 ~~~~~~G~l~dr~~Gr-------k~~~~~~~~~~~i~~~~~~~~~~~ 169 (525)
.+.+..+++.+| .-+ ++.+.++.++...+.++++...|.
T Consensus 33 a~~p~~~~~~~~-~~~~~~~~~~~~~~~~a~~ig~~gGfl~ayqrS~ 78 (86)
T PF10785_consen 33 AASPPLGYYMER-SAPSRVGRGGGPAMRLAGAIGFFGGFLLAYQRSS 78 (86)
T ss_pred HHHHHHHHHHhc-ccccccccccchHHHHHHHHHHHHHHHHHHHHhh
Confidence 444555555555 333 788888888888888888876553
No 327
>PF02632 BioY: BioY family; InterPro: IPR003784 BioMNY proteins are considered to constitute tripartite biotin transporters in prokaryotes. One-third of the widespread bioY genes are linked to bioMN. Many bioY genes are located at loci encoding biotin biosynthesis, while others are unlinked to biotin metabolic or transport genes. BioY is a high-capacity transporter that is converted to a high-affinity system in the presence of BioMN. BioMNY-mediated biotin uptake is severely impaired by the replacement of the Walker A lysine residue in BioM, demonstrating the dependency of high-affinity transport on a functional ATPase [].
Probab=28.14 E-value=1.9e+02 Score=23.79 Aligned_cols=26 Identities=23% Similarity=0.372 Sum_probs=21.2
Q ss_pred HHHHHHHHHHhHHhhHhcccccCCchH
Q 041759 121 AASHFTGCLLGIVFLATLADSSLGRKN 147 (525)
Q Consensus 121 ~s~~~lg~~~~~~~~G~l~dr~~Grk~ 147 (525)
..-|.+|+.+.+.+.|++.+| ..+++
T Consensus 59 TgGyl~gf~~~a~i~g~~~~~-~~~~~ 84 (148)
T PF02632_consen 59 TGGYLLGFPLAALIIGLLAER-LKRSR 84 (148)
T ss_pred CChHHHHHHHHHHHHHHHHHh-ccccc
Confidence 355788888999999999999 77764
No 328
>PF12670 DUF3792: Protein of unknown function (DUF3792); InterPro: IPR023804 Members of this family of strongly hydrophobic putative transmembrane protein average about 125 amino acids in length and occur mostly, but not exclusively, in the Firmicutes. Members are quite diverse in sequence. Their function is unknown.
Probab=26.85 E-value=3.1e+02 Score=21.42 Aligned_cols=37 Identities=14% Similarity=0.028 Sum_probs=19.6
Q ss_pred ChhHHHHHHHHHhcccccccCchhHHHHHHHHHhhcChhHHHHH
Q 041759 353 FDIYLGVVFNALLEIPNLASTIPSFFLTFFLIQKWNRKSSLLVL 396 (525)
Q Consensus 353 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~d~~g~~~~~~~~ 396 (525)
.++...........+ ++.+++|+++-|..++|-+..+
T Consensus 34 ~~e~~~~~~~~~i~~-------ls~~~GG~~a~~~~~~kG~l~G 70 (116)
T PF12670_consen 34 LSESILPWLVVIIYI-------LSVFIGGFYAGRKAGSKGWLHG 70 (116)
T ss_pred CCHHHHHHHHHHHHH-------HHHHHHHHHHHHHHccchHHHH
Confidence 444444444444444 6777777776655444333333
No 329
>PF05297 Herpes_LMP1: Herpesvirus latent membrane protein 1 (LMP1); InterPro: IPR007961 This family consists of several latent membrane protein 1 or LMP1s mostly from Epstein-Barr virus (strain GD1) (HHV-4) (Human herpesvirus 4). LMP1 of HHV-4 is a 62-65 kDa plasma membrane protein possessing six membrane spanning regions, a short cytoplasmic N terminus and a long cytoplasmic carboxy tail of 200 amino acids. HHV-4 virus latent membrane protein 1 (LMP1) is essential for HHV-4 mediated transformation and has been associated with several cases of malignancies. HHV-4-like viruses in Macaca fascicularis (Cynomolgus monkeys) have been associated with high lymphoma rates in immunosuppressed monkeys [].; GO: 0019087 transformation of host cell by virus, 0016021 integral to membrane; PDB: 1CZY_E 1ZMS_B.
Probab=26.34 E-value=22 Score=32.19 Aligned_cols=22 Identities=9% Similarity=0.321 Sum_probs=0.0
Q ss_pred hHHHHHHHHHhhcChhHHHHHH
Q 041759 376 SFFLTFFLIQKWNRKSSLLVLF 397 (525)
Q Consensus 376 ~~~~~~~l~d~~g~~~~~~~~~ 397 (525)
+..+.-++.+++|....-+.++
T Consensus 121 ~vW~Ym~lLr~~GAs~WtiLaF 142 (381)
T PF05297_consen 121 GVWFYMWLLRELGASFWTILAF 142 (381)
T ss_dssp ----------------------
T ss_pred HHHHHHHHHHHhhhHHHHHHHH
Confidence 3344456777777655444433
No 330
>PF10183 ESSS: ESSS subunit of NADH:ubiquinone oxidoreductase (complex I) ; InterPro: IPR019329 NADH:ubiquinone oxidoreductase (complex I) (1.6.5.3 from EC) is a respiratory-chain enzyme that catalyses the transfer of two electrons from NADH to ubiquinone in a reaction that is associated with proton translocation across the membrane (NADH + ubiquinone = NAD+ + ubiquinol) []. Complex I is a major source of reactive oxygen species (ROS) that are predominantly formed by electron transfer from FMNH(2). Complex I is found in bacteria, cyanobacteria (as a NADH-plastoquinone oxidoreductase), archaea [], mitochondira, and in the hydrogenosome, a mitochondria-derived organelle. In general, the bacterial complex consists of 14 different subunits, while the mitochondrial complex contains homologues to these subunits in addition to approximately 31 additional proteins []. Mitochondrial complex I, which is located in the inner mitochondrial membrane, is the largest multimeric respiratory enzyme in the mitochondria, consisting of more than 40 subunits, one FMN co-factor and eight FeS clusters []. The assembly of mitochondrial complex I is an intricate process that requires the cooperation of the nuclear and mitochondrial genomes [, ]. Mitochondrial complex I can cycle between active and deactive forms that can be distinguished by the reactivity towards divalent cations and thiol-reactive agents. All redox prosthetic groups reside in the peripheral arm of the L-shaped structure. The NADH oxidation domain harbouring the FMN cofactor is connected via a chain of iron-sulphur clusters to the ubiquinone reduction site that is located in a large pocket formed by the PSST and 49kDa subunits of complex I []. This entry represents the ESSS subunit from mitochondrial NADH:ubiquinone oxidoreductase (complex I). It carries mitochondrial import sequences [].
Probab=26.08 E-value=74 Score=24.41 Aligned_cols=30 Identities=13% Similarity=0.527 Sum_probs=23.3
Q ss_pred CCchHHHHHHHHHHHHHHHhHhheeecCCc
Q 041759 230 SSSWTIIYLWTSIPTLVYSGLLYIFVSESP 259 (525)
Q Consensus 230 ~~~wr~~f~~~~~~~~~~~~~~~~~lpesp 259 (525)
..+|+.+|++...++++.+.+.+.+.||+.
T Consensus 56 ~e~we~~~f~~~~~~~v~~~~~~~y~PD~~ 85 (105)
T PF10183_consen 56 WEGWELPFFFGFSGSLVFGGVFLAYKPDTS 85 (105)
T ss_pred HhhhHHHHHHHHHHHHHHHHHHHHcCCCCC
Confidence 458999999877777777767777888864
No 331
>PF07456 Hpre_diP_synt_I: Heptaprenyl diphosphate synthase component I; InterPro: IPR010898 This family contains component I of bacterial heptaprenyl diphosphate synthase (2.5.1.30 from EC) (approximately 170 residues long). This is one of the two dissociable subunits that form the enzyme, both of which are required for the catalysis of the biosynthesis of the side chain of menaquinone-7 [].
Probab=25.30 E-value=1.7e+02 Score=24.19 Aligned_cols=51 Identities=10% Similarity=0.035 Sum_probs=34.4
Q ss_pred HHHHHHHHHHhHHhhHhcccccCCchHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHH
Q 041759 121 AASHFTGCLLGIVFLATLADSSLGRKNLLFLSCLTMSVATSLTIFSNNLWIYSLLRFF 178 (525)
Q Consensus 121 ~s~~~lg~~~~~~~~G~l~dr~~Grk~~~~~~~~~~~i~~~~~~~~~~~~~l~~~r~l 178 (525)
.-.+.++..+.+...-.+..| ..||+.=.++. ++..+.+||..+++++.++
T Consensus 67 ~f~~Sl~Ggl~S~~vM~ll~~-~~~~~~S~~gi------Si~Gai~HN~gQl~va~~i 117 (148)
T PF07456_consen 67 SFLFSLAGGLLSLLVMALLKK-LFKKKFSLIGI------SIAGAIAHNIGQLIVASLI 117 (148)
T ss_pred HHHHHHHHHHHHHHHHHHHHH-hCCCCccHHHH------HHHHHHHHHHHHHHHHHHH
Confidence 356777778888888888888 87766544433 2344566777777777765
No 332
>PRK02237 hypothetical protein; Provisional
Probab=24.80 E-value=1.8e+02 Score=22.38 Aligned_cols=51 Identities=10% Similarity=0.060 Sum_probs=38.8
Q ss_pred hhhhhHHHHHHHHHHHhHHhhHhcccccCCchHHHHHHHHHHHHHHHHHHhh
Q 041759 115 FIKGLPAASHFTGCLLGIVFLATLADSSLGRKNLLFLSCLTMSVATSLTIFS 166 (525)
Q Consensus 115 ~~~g~~~s~~~lg~~~~~~~~G~l~dr~~Grk~~~~~~~~~~~i~~~~~~~~ 166 (525)
+..|=+.++|.-.+.+.++.+++..|+ .-+-+.=.+|..+..+|..+..+.
T Consensus 56 ~~~GRvYAAYGGvyI~~Sl~W~w~vdg-~~Pd~~D~iGa~v~L~G~~iI~~~ 106 (109)
T PRK02237 56 AAFGRVYAAYGGVYVAGSLLWLWVVDG-VRPDRWDWIGAAICLVGMAVIMYA 106 (109)
T ss_pred hhhhhHHHHhhhHHHHHHHHHHHHhcC-cCCChhHHHhHHHHHHhHHHheec
Confidence 346778888988999999999999999 877666667777666666555443
No 333
>TIGR02185 Trep_Strep conserved hypothetical integral membrane protein TIGR02185. This family consists of strongly hydrophobic proteins about 190 amino acids in length with a strongly basic motif near the C-terminus. If is found in rather few species, but in paralogous families of 12 members in the oral pathogenic spirochaete Treponema denticola and 2 in Streptococcus pneumoniae R6.
Probab=23.98 E-value=4.2e+02 Score=22.92 Aligned_cols=56 Identities=11% Similarity=0.207 Sum_probs=38.2
Q ss_pred HHHHHHHHHhHHhhHhcccccCCchHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHhh
Q 041759 122 ASHFTGCLLGIVFLATLADSSLGRKNLLFLSCLTMSVATSLTIFSNNLWIYSLLRFFSGI 181 (525)
Q Consensus 122 s~~~lg~~~~~~~~G~l~dr~~Grk~~~~~~~~~~~i~~~~~~~~~~~~~l~~~r~l~G~ 181 (525)
....+...++.++.-.+..| .+|+-.+.+-.++.++..++ ..+.|...+.-++.|+
T Consensus 37 ~~p~i~al~~g~vyml~~~K-V~K~G~~~i~~~i~gl~~~~---~G~~~~~~~~~ii~gl 92 (189)
T TIGR02185 37 FSPGITAFLVGIIFFLMVAK-VPKRGVIFIFGILLGLLFFL---MGMYWPMIISSIIGGL 92 (189)
T ss_pred HHHHHHHHHHhHHHhhhhhh-cCCccHHHHHHHHHHHHHHH---HcccHHHHHHHHHHHH
Confidence 44566667778888888999 99998887777766664443 3345656666666664
No 334
>PRK10263 DNA translocase FtsK; Provisional
Probab=23.83 E-value=4.6e+02 Score=30.37 Aligned_cols=6 Identities=0% Similarity=0.168 Sum_probs=2.7
Q ss_pred HHhhhc
Q 041759 57 FISVYT 62 (525)
Q Consensus 57 ~~~~~~ 62 (525)
.+++|.
T Consensus 40 ALiSYs 45 (1355)
T PRK10263 40 ALLSFN 45 (1355)
T ss_pred HHHhCC
Confidence 344444
No 335
>PF01102 Glycophorin_A: Glycophorin A; InterPro: IPR001195 Proteins in this group are responsible for the molecular basis of the blood group antigens, surface markers on the outside of the red blood cell membrane. Most of these markers are proteins, but some are carbohydrates attached to lipids or proteins [Reid M.E., Lomas-Francis C. The Blood Group Antigen FactsBook Academic Press, London / San Diego, (1997)]. Glycophorin A (PAS-2) and glycophorin B (PAS-3) belong to the MNS blood group system and are associated with antigens that include M/N, S/s, U, He, Mi(a), M(c), Vw, Mur, M(g), Vr, M(e), Mt(a), St(a), Ri(a), Cl(a), Ny(a), Hut, Hil, M(v), Far, Mit, Dantu, Hop, Nob, En(a), ENKT, amongst others. Glycophorin A is the major sialoglycoprotein of the erythrocyte membrane []. Structurally, glycophorin A consists of an N-terminal extracellular domain, heavily glycosylated on serine and threonine residues, followed by a transmembrane region and a C-terminal cytoplasmic domain. Other glycophorins in this entry such as Glycophorin B and Glycophorin E represent minor sialoglycoproteins in the erythrocyte membrane.; GO: 0016021 integral to membrane; PDB: 2KPF_B 1AFO_B 2KPE_A.
Probab=23.54 E-value=65 Score=25.49 Aligned_cols=12 Identities=25% Similarity=0.493 Sum_probs=4.0
Q ss_pred HHHhccCCCCCC
Q 041759 498 FVICLPETRGSS 509 (525)
Q Consensus 498 ~~~~~~~~~~~~ 509 (525)
+++++++.++|.
T Consensus 84 i~y~irR~~Kk~ 95 (122)
T PF01102_consen 84 ISYCIRRLRKKS 95 (122)
T ss_dssp HHHHHHHHS---
T ss_pred HHHHHHHHhccC
Confidence 344444444443
No 336
>COG3086 RseC Positive regulator of sigma E activity [Signal transduction mechanisms]
Probab=23.26 E-value=4.2e+02 Score=21.71 Aligned_cols=65 Identities=18% Similarity=0.057 Sum_probs=37.1
Q ss_pred cCCCCccccceeeccccccchhhhhhhHHHHHHHHHHHhHHhhHhcccccCCchHH-HHHHHHHHHHHHHHH
Q 041759 93 DGNPTTTALTIISEWGLECSSAFIKGLPAASHFTGCLLGIVFLATLADSSLGRKNL-LFLSCLTMSVATSLT 163 (525)
Q Consensus 93 ~~~p~~~~~~i~~~~~~~~~s~~~~g~~~s~~~lg~~~~~~~~G~l~dr~~Grk~~-~~~~~~~~~i~~~~~ 163 (525)
..+|. -|.=+-+.|+ ++...=-...+.++.-+++.++...++|+ .++-.. .+++.++..+..++.
T Consensus 55 t~~pL--~~Gq~VeiGi---~EkslL~sA~LvYi~PL~~l~v~~~La~~-L~~~e~~~~~~~~lg~~l~fl~ 120 (150)
T COG3086 55 TDEPL--EPGQKVELGI---EEKSLLKSALLVYIFPLVGLFLGAILAQY-LFFSELIVIFGAFLGLALGFLL 120 (150)
T ss_pred cCCcC--CCCCEEEEcc---CcccHHHHHHHHHHHHHHHHHHHHHHHHH-HhhhhHHHHHHHHHHHHHHHHH
Confidence 34454 5555667788 43333333445556666777788888888 777544 444554444444433
No 337
>PF12805 FUSC-like: FUSC-like inner membrane protein yccS
Probab=23.25 E-value=3.6e+02 Score=25.08 Aligned_cols=37 Identities=14% Similarity=0.159 Sum_probs=21.9
Q ss_pred HHHHHHHHHHHHHHHhh-hhHHHHHHHHHHHhhcccch
Q 041759 150 FLSCLTMSVATSLTIFS-NNLWIYSLLRFFSGISRATI 186 (525)
Q Consensus 150 ~~~~~~~~i~~~~~~~~-~~~~~l~~~r~l~G~~~~~~ 186 (525)
+.+++++++++++..+. ++.|.+.+.-++.+++.++.
T Consensus 3 ~~~~~~~~~~s~~~~l~~~~~~l~~~~~~~~~F~~~ml 40 (284)
T PF12805_consen 3 IATLLCFALASLLVGLLFPYPWLLILVLALLTFFFGML 40 (284)
T ss_pred HHHHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHHHHH
Confidence 45555665555555544 55566666667777766644
No 338
>PF02694 UPF0060: Uncharacterised BCR, YnfA/UPF0060 family; InterPro: IPR003844 This entry describes integral membrane proteins of unknown function.; GO: 0016020 membrane
Probab=23.17 E-value=1.7e+02 Score=22.48 Aligned_cols=51 Identities=12% Similarity=0.094 Sum_probs=39.5
Q ss_pred hhhhhHHHHHHHHHHHhHHhhHhcccccCCchHHHHHHHHHHHHHHHHHHhh
Q 041759 115 FIKGLPAASHFTGCLLGIVFLATLADSSLGRKNLLFLSCLTMSVATSLTIFS 166 (525)
Q Consensus 115 ~~~g~~~s~~~lg~~~~~~~~G~l~dr~~Grk~~~~~~~~~~~i~~~~~~~~ 166 (525)
...|=+.++|.-.+.+.++.+++..|+ .-+.+.=.+|..+..+|.....+.
T Consensus 54 ~~fGRvYAAYGGvfI~~Sl~W~w~vdg-~~Pd~~D~iGa~i~L~G~~iI~~~ 104 (107)
T PF02694_consen 54 AAFGRVYAAYGGVFIVASLLWGWLVDG-VRPDRWDWIGAAICLVGVAIILFA 104 (107)
T ss_pred ccchhHHHHhhhhHHHHHHHHHhhhcC-cCCChHHHHhHHHHHHhHHheEec
Confidence 455777888888899999999999999 887777777777776666655443
No 339
>PF07760 DUF1616: Protein of unknown function (DUF1616); InterPro: IPR011674 This is a group of sequences from hypothetical archaeal proteins. The region in question is approximately 330 amino acid residues long.
Probab=22.53 E-value=2.7e+02 Score=26.04 Aligned_cols=58 Identities=10% Similarity=-0.078 Sum_probs=33.7
Q ss_pred HHHHHHHHhhcccchhhhhheeeEeeecCcchhhHHhHHHHHHHHHHHHHHHHHHhccC
Q 041759 172 YSLLRFFSGISRATIGTCTIVLLTEKVGTEWRGLVGILDSFFFTIGTLTLPAIAYTNRS 230 (525)
Q Consensus 172 l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~l~~~l~~~~~~ 230 (525)
--..|.+.|+-.- .+..+++++.-.+|++++--..--.....+++.++-|++|..+..
T Consensus 22 ~~~lr~~~g~~~v-lf~PGy~l~~~lfp~~~~l~~~er~~ls~glSi~~~~~~g~~l~~ 79 (287)
T PF07760_consen 22 IPPLRVILGFPFV-LFLPGYALVAALFPRKHDLDGIERLALSVGLSIAIVPLIGLLLNY 79 (287)
T ss_pred hhHHHHHHHHHHH-HHhccHHHHHHHccCcCCCcHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 4566777777653 345567777777875543322222334444555666777777654
No 340
>PF06123 CreD: Inner membrane protein CreD; InterPro: IPR010364 This family consists of several bacterial CreD or Cet inner membrane proteins. Dominant mutations of the cet gene of Escherichia coli result in tolerance to colicin E2 and increased amounts of an inner membrane protein with a Mr of 42,000. The cet gene is shown to be in the same operon as the phoM gene, which is required in a phoR background for expression of the structural gene for alkaline phosphatase, phoA. Although the Cet protein is not required for phoA expression, it has been suggested that the Cet protein has an enhancing effect on the transcription of phoA [].
Probab=22.05 E-value=8.1e+02 Score=24.54 Aligned_cols=21 Identities=24% Similarity=0.350 Sum_probs=13.1
Q ss_pred hhHHHHHHHHHhhcChhHHHH
Q 041759 375 PSFFLTFFLIQKWNRKSSLLV 395 (525)
Q Consensus 375 ~~~~~~~~l~d~~g~~~~~~~ 395 (525)
.-++++-++.+.++++++.-+
T Consensus 306 ~LTF~~fflfE~~~~~~iHpi 326 (430)
T PF06123_consen 306 GLTFLAFFLFELLSKLRIHPI 326 (430)
T ss_pred HHHHHHHHHHHHHhcCcccHH
Confidence 455566677777776665433
No 341
>PF11023 DUF2614: Protein of unknown function (DUF2614); InterPro: IPR020912 This entry describes proteins of unknown function, which are thought to be membrane proteins.; GO: 0005887 integral to plasma membrane
Probab=21.99 E-value=3.8e+02 Score=20.77 Aligned_cols=17 Identities=24% Similarity=0.385 Sum_probs=7.4
Q ss_pred HhhcChhHHHHHHHHHH
Q 041759 385 QKWNRKSSLLVLFIISG 401 (525)
Q Consensus 385 d~~g~~~~~~~~~~~~~ 401 (525)
.|+++-+.+.+.++..+
T Consensus 6 ~KiN~~R~~al~lif~g 22 (114)
T PF11023_consen 6 SKINKIRTFALSLIFIG 22 (114)
T ss_pred hHHHHHHHHHHHHHHHH
Confidence 34454444444443333
No 342
>TIGR00836 amt ammonium transporter. The mechanism of energy coupling, if any, to methyl-NH2 or NH3 uptake by the AmtB protein of E. coli is not entirely clear. NH4+ uniport driven by the pmf, energy independent NH3 facilitation, and NH4+/K+ antiport have been proposed as possible transport mechanisms. In Corynebacterium glutamicum and Arabidopsis thaliana, uptake via the Amt1 homologues of AmtB has been reported to be driven by the pmf.
Probab=21.58 E-value=8e+02 Score=24.32 Aligned_cols=31 Identities=10% Similarity=0.030 Sum_probs=15.1
Q ss_pred ccccCcchhhhhhHHHHHHHHHHHHHHHHHH
Q 041759 444 IELFPTCVRNSATSIMRLAIIFAAIFSSVLV 474 (525)
Q Consensus 444 ~~~~p~~~r~~~~~~~~~~~~~g~~~~p~i~ 474 (525)
.+..+-+..--+..+....+..|.+..+++.
T Consensus 301 ~~~~~iDD~~~~~~vHg~~Gi~G~i~~glfa 331 (403)
T TIGR00836 301 KKKLKIDDPLDAFAVHGVGGIWGLIATGLFA 331 (403)
T ss_pred HHHcCCCCCcccchhhhhhHHHHHHHHHHhc
Confidence 3333333333445555555555665555554
No 343
>PF13000 Acatn: Acetyl-coenzyme A transporter 1; InterPro: IPR024371 Acetyl-coenzyme A transporter 1 (also known as acatn) is a multipass transmembrane protein that appears to promote 9-O-acetylation in gangliosides [, ]. This entry represents acatn and its homologues.; GO: 0008521 acetyl-CoA transporter activity, 0016021 integral to membrane
Probab=20.42 E-value=9.5e+02 Score=24.72 Aligned_cols=49 Identities=8% Similarity=0.038 Sum_probs=39.3
Q ss_pred HHHHHHHHHhhcccchhhhhheeeEeeecCcchhhHHhHHHHHHHHHHH
Q 041759 171 IYSLLRFFSGISRATIGTCTIVLLTEKVGTEWRGLVGILDSFFFTIGTL 219 (525)
Q Consensus 171 ~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~ 219 (525)
.+++..++.-+..-..+....+.-+.+.+|..-|..|.+.++..++|.-
T Consensus 407 lvI~~~~l~sf~stvmFVai~AFharISDP~IGGTYMTLLNTvSNLGGt 455 (544)
T PF13000_consen 407 LVIIQHVLSSFMSTVMFVAIMAFHARISDPAIGGTYMTLLNTVSNLGGT 455 (544)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhhccCcccchHHHHHHHHHHhcCCC
Confidence 4444557777777777888888888889999999999999999888863
No 344
>PF08611 DUF1774: Fungal protein of unknown function (DUF1774); InterPro: IPR013920 This is a fungal protein of unknown function.
Probab=20.27 E-value=3.8e+02 Score=20.23 Aligned_cols=18 Identities=0% Similarity=0.060 Sum_probs=9.6
Q ss_pred hhHHHHHHHHHHHHHHHH
Q 041759 481 EFVSYGVFGLVIICCGFF 498 (525)
Q Consensus 481 ~~~~~~~~~~~~~~~~~~ 498 (525)
+--+|.+.+++.+.....
T Consensus 52 WIFAFvI~avlfv~sl~v 69 (97)
T PF08611_consen 52 WIFAFVIAAVLFVLSLVV 69 (97)
T ss_pred HHHHHHHHHHHHHHHHHH
Confidence 344556666655554443
Done!