BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 041762
(287 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q9C9P4|KASC2_ARATH 3-oxoacyl-[acyl-carrier-protein] synthase II, chloroplastic
OS=Arabidopsis thaliana GN=KAS2 PE=1 SV=1
Length = 541
Score = 347 bits (890), Expect = 5e-95, Method: Compositional matrix adjust.
Identities = 172/306 (56%), Positives = 213/306 (69%), Gaps = 33/306 (10%)
Query: 11 AKSEKVAPEVKRRVVVTGLGAVTPLGDDAHLFYTKLLEGVSGISQIEGFDCSELPTRIAG 70
A K P +RRVVVTG+G T LG D H FY LL+G SGISQIE FDCSE PTRIAG
Sbjct: 119 AAVNKKPPTEQRRVVVTGMGVETSLGHDPHTFYENLLQGNSGISQIENFDCSEFPTRIAG 178
Query: 71 EIKTLSTDGLVPPKHAKRADNYLIYALIAGKKALADAGITEQVSGELNKNRCGVLIGTAM 130
EIK+ ST+G V PK +KR D +++Y L AGKKALAD G+T++V E +K +CGVLIG+AM
Sbjct: 179 EIKSFSTEGWVAPKLSKRMDKFMLYLLTAGKKALADGGVTDEVMAEFDKTKCGVLIGSAM 238
Query: 131 GSMRALKDGIDAIKISYKKMT--------------------------------CATGNCC 158
G M+ D I+A++ISYKKM CAT N C
Sbjct: 239 GGMKVFYDAIEALRISYKKMNPFCVPFATTNMGSAMLAMDLGWMGPNYSISTACATSNFC 298
Query: 159 ILTAANHIIEGDADMMLCGGSDGVIIPECIAGFIACNNLSRRNSDPTKASRPWDSDHDGF 218
IL +ANHII+G+AD+MLCGGSD VIIP + GF+AC LS+RN+DPTKASRPWD++ DGF
Sbjct: 299 ILNSANHIIKGEADVMLCGGSDAVIIPIGLGGFVACRALSQRNNDPTKASRPWDTNRDGF 358
Query: 219 VMGEGAGVMLLEELDHAKRRRANIYAEFKGGSSTY-AYHISEPRLNALGAMACMEKALTN 277
VMGEGAGV+LLEEL+HAK+R A IYAEF GGS T AYH++EP + G + C+E+AL +
Sbjct: 359 VMGEGAGVLLLEELEHAKKRGATIYAEFLGGSFTCDAYHMTEPHPDGAGVILCIERALAS 418
Query: 278 SGVSGE 283
+G+S E
Sbjct: 419 AGISKE 424
>sp|P52410|KASC1_ARATH 3-oxoacyl-[acyl-carrier-protein] synthase I, chloroplastic
OS=Arabidopsis thaliana GN=KAS1 PE=1 SV=2
Length = 473
Score = 241 bits (616), Expect = 3e-63, Method: Compositional matrix adjust.
Identities = 127/311 (40%), Positives = 187/311 (60%), Gaps = 36/311 (11%)
Query: 7 TAVSAKSEKVAPEVKRRVVVTGLGAVTPLGDDAHLFYTKLLEGVSGISQIEGFDCSELPT 66
+ VSA + P K+RVV+TG+G V+ G+D +Y KLL G SGIS I+ FD S+ PT
Sbjct: 48 STVSAPKRETDP--KKRVVITGMGLVSVFGNDVDAYYEKLLSGESGISLIDRFDASKFPT 105
Query: 67 RIAGEIKTLSTDGLVPPKHAKRADNYLIYALIAGKKALADAGITEQVSGELNKNRCGVLI 126
R G+I+ S++G + K+ +R D+ L Y ++AGKKAL A + ++K + GVL+
Sbjct: 106 RFGGQIRGFSSEGYIDGKNERRLDDCLKYCIVAGKKALESANLGGDKLNTIDKRKAGVLV 165
Query: 127 GTAMGSMRALKDGI-DAIKISYKKMT--------------------------------CA 153
GT MG + +G+ + I+ +++++ CA
Sbjct: 166 GTGMGGLTVFSEGVQNLIEKGHRRISPFFIPYAITNMGSALLAIDLGLMGPNYSISTACA 225
Query: 154 TGNCCILTAANHIIEGDADMMLCGGSDGVIIPECIAGFIACNNLSRRNSDPTKASRPWDS 213
T N C AANHI G+ADMM+ GG++ IIP + GF+AC LS+RN DP ASRPWD
Sbjct: 226 TSNYCFYAAANHIRRGEADMMIAGGTEAAIIPIGLGGFVACRALSQRNDDPQTASRPWDK 285
Query: 214 DHDGFVMGEGAGVMLLEELDHAKRRRANIYAEFKGGS-STYAYHISEPRLNALGAMACME 272
DGFVMGEGAGV+++E L+HA +R A I AE+ GG+ + A+H+++PR + LG +C+E
Sbjct: 286 ARDGFVMGEGAGVLVMESLEHAMKRGAPIVAEYLGGAVNCDAHHMTDPRADGLGVSSCIE 345
Query: 273 KALTNSGVSGE 283
+ L ++GVS E
Sbjct: 346 RCLEDAGVSPE 356
>sp|P23902|KASC1_HORVU 3-oxoacyl-[acyl-carrier-protein] synthase I, chloroplastic
OS=Hordeum vulgare GN=KAS12 PE=1 SV=1
Length = 462
Score = 229 bits (583), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 119/299 (39%), Positives = 178/299 (59%), Gaps = 36/299 (12%)
Query: 21 KRRVVVTGLGAVTPLGDDAHLFYTKLLEGVSGISQIEGFDCSELPTRIAGEIKTLSTDGL 80
++RVV+TG+G + G D FY +LL G SG+ I+ FD S PTR AG+I+ S++G
Sbjct: 47 RKRVVITGMGLASVFGSDVDTFYDRLLAGESGVGPIDRFDASSFPTRFAGQIRGFSSEGY 106
Query: 81 VPPKHAKRADNYLIYALIAGKKALADAGIT--EQVSGELNKNRCGVLIGTAMGSMRALKD 138
+ K+ +R D+ + Y +++GKKAL AG+ +L+ R GVL+GT MG + D
Sbjct: 107 IDGKNDRRLDDCIRYCILSGKKALESAGLGAGSDAHVKLDVGRAGVLVGTGMGGLSVFSD 166
Query: 139 GI-DAIKISYKKMT--------------------------------CATGNCCILTAANH 165
G+ + I+ Y+K++ CAT N C AANH
Sbjct: 167 GVQNLIEKGYRKISPFFIPYAITNMGSALLAIDVGFMGPNYSISTACATSNYCFYAAANH 226
Query: 166 IIEGDADMMLCGGSDGVIIPECIAGFIACNNLSRRNSDPTKASRPWDSDHDGFVMGEGAG 225
I G+AD+++ GG++ IIP + GF+AC LS+RN DP A RPWD + DGFVMGEGAG
Sbjct: 227 IRRGEADIIVAGGTEAAIIPIGLGGFVACRALSQRNDDPITACRPWDKERDGFVMGEGAG 286
Query: 226 VMLLEELDHAKRRRANIYAEFKGGS-STYAYHISEPRLNALGAMACMEKALTNSGVSGE 283
V+++E L+HA +R A I AE+ GG+ + AYH+++PR + LG +C+ +L ++GV+ E
Sbjct: 287 VLVMESLEHAMKRDAPIIAEYLGGAVNCDAYHMTDPRADGLGVSSCITMSLRDAGVAPE 345
>sp|Q9KQH9|FABF_VIBCH 3-oxoacyl-[acyl-carrier-protein] synthase 2 OS=Vibrio cholerae
serotype O1 (strain ATCC 39315 / El Tor Inaba N16961)
GN=fabF PE=3 SV=3
Length = 414
Score = 190 bits (482), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 116/297 (39%), Positives = 160/297 (53%), Gaps = 37/297 (12%)
Query: 21 KRRVVVTGLGAVTPLGDDAHLFYTKLLEGVSGISQIEGFDCSELPTRIAGEIKTLSTDGL 80
KRRVVVTG+G ++P+G+ + LL G SGI IE FD + TR AG +K +
Sbjct: 3 KRRVVVTGMGMLSPVGNTVESSWKALLAGQSGIVNIEHFDTTNFSTRFAGLVKGFDCEQY 62
Query: 81 VPPKHAKRADNYLIYALIAGKKALADAGITEQVSGELNKNRCGVLIGTAMGSMRALKDGI 140
+ K A++ D ++ Y + AG +AL D+G+ E N R GV IG+ +G + ++ G
Sbjct: 63 MSKKDARKMDLFIQYGIAAGIQALEDSGLEVN---EENAARIGVAIGSGIGGLELIETGH 119
Query: 141 DA-IKISYKKMT--------------------------------CATGNCCILTAANHII 167
A I+ +K++ C TG I AA I
Sbjct: 120 QALIEKGPRKVSPFFVPSTIVNMIAGNLSIMRGLRGPNIAISTACTTGLHNIGHAARMIA 179
Query: 168 EGDADMMLCGGSDGVIIPECIAGFIACNNLSRRNSDPTKASRPWDSDHDGFVMGEGAGVM 227
GDAD M+ GG++ P +AGF A LS RN +P KASRPWD D DGFV+G+GAG+M
Sbjct: 180 YGDADAMVAGGAEKASTPLGMAGFGAAKALSTRNDEPQKASRPWDKDRDGFVLGDGAGIM 239
Query: 228 LLEELDHAKRRRANIYAEFKG-GSSTYAYHISEPRLNALGAMACMEKALTNSGVSGE 283
+LEE +HAK R A IYAE G G S AYH++ P + G ME A+ ++GV+GE
Sbjct: 240 VLEEYEHAKARGAKIYAEVVGFGMSGDAYHMTSPSEDGSGGALAMEAAMRDAGVTGE 296
>sp|P73283|FABF_SYNY3 3-oxoacyl-[acyl-carrier-protein] synthase 2 OS=Synechocystis sp.
(strain PCC 6803 / Kazusa) GN=fabF PE=1 SV=1
Length = 416
Score = 184 bits (467), Expect = 6e-46, Method: Compositional matrix adjust.
Identities = 114/298 (38%), Positives = 158/298 (53%), Gaps = 37/298 (12%)
Query: 21 KRRVVVTGLGAVTPLGDDAHLFYTKLLEGVSGISQIEGFDCSELPTRIAGEIKTLSTDGL 80
K+RVVVTGLGA+TP+G+ ++ L+EG +GI I FD S+ R GE+K
Sbjct: 6 KKRVVVTGLGAITPIGNTLQDYWQGLMEGRNGIGPITRFDASDQACRFGGEVKDFDATQF 65
Query: 81 VPPKHAKRADNYLIYALIAGKKALADAGITEQVSGELNKNRCGVLIGTAMGSMRALKD-- 138
+ K AKR D + +A+ A ++A+ DA + V ELN + GVLIGT +G ++ L+D
Sbjct: 66 LDRKEAKRMDRFCHFAVCASQQAINDAKL---VINELNADEIGVLIGTGIGGLKVLEDQQ 122
Query: 139 -------------------------GIDAIKISYKK------MTCATGNCCILTAANHII 167
G+ AI + K CA G+ I A +
Sbjct: 123 TILLDKGPSRCSPFMIPMMIANMASGLTAINLGAKGPNNCTVTACAAGSNAIGDAFRLVQ 182
Query: 168 EGDADMMLCGGSDGVIIPECIAGFIACNNLSRRNSDPTKASRPWDSDHDGFVMGEGAGVM 227
G A M+CGG++ I P AGF + LS RN DP ASRP+D D DGFVMGEG+G++
Sbjct: 183 NGYAKAMICGGTEAAITPLSYAGFASARALSFRNDDPLHASRPFDKDRDGFVMGEGSGIL 242
Query: 228 LLEELDHAKRRRANIYAEFKGGSSTY-AYHISEPRLNALGAMACMEKALTNSGVSGEI 284
+LEEL+ A R A IY E G + T AYHI+ P + GA + AL +SG+ E+
Sbjct: 243 ILEELESALARGAKIYGEMVGYAMTCDAYHITAPVPDGRGATRAIAWALKDSGLKPEM 300
>sp|Q83E37|FABF_COXBU 3-oxoacyl-[acyl-carrier-protein] synthase 2 OS=Coxiella burnetii
(strain RSA 493 / Nine Mile phase I) GN=fabF PE=1 SV=1
Length = 414
Score = 184 bits (466), Expect = 9e-46, Method: Compositional matrix adjust.
Identities = 109/297 (36%), Positives = 154/297 (51%), Gaps = 37/297 (12%)
Query: 21 KRRVVVTGLGAVTPLGDDAHLFYTKLLEGVSGISQIEGFDCSELPTRIAGEIKTLSTDGL 80
KRRVV+TGLG V+PLG+ + LL G SG+ I FD S PT+IA E++ +
Sbjct: 3 KRRVVITGLGVVSPLGNKVSDMWQALLAGKSGVKPITRFDASSFPTQIAAEVRDFDPALV 62
Query: 81 VPPKHAKRADNYLIYALIAGKKALADAGITEQVSGELNKNRCGVLIGTAMGSMRALKDGI 140
+ K ++ D ++ +A+ + ++A D+G+ E N R GV IG+ +G M ++
Sbjct: 63 LDLKSIRKTDVFVQFAMESARQAWEDSGLEIN---ETNAPRVGVAIGSGIGGMPWIEKNY 119
Query: 141 DAIKISYKK---------------------------------MTCATGNCCILTAANHII 167
DA+ S + C TG I AA I
Sbjct: 120 DALLTSGPRKISPFFIPGAIINMASGMVSIKYDLKGPNISIVTACTTGLHNIGHAARMIA 179
Query: 168 EGDADMMLCGGSDGVIIPECIAGFIACNNLSRRNSDPTKASRPWDSDHDGFVMGEGAGVM 227
DAD M+ GG++ P I GF A LS RN +P KASRPWD DGFV+GEGA +
Sbjct: 180 HNDADAMIAGGTEMASTPLGIGGFAAVRALSTRNDEPEKASRPWDKGRDGFVLGEGAACV 239
Query: 228 LLEELDHAKRRRANIYAEFKG-GSSTYAYHISEPRLNALGAMACMEKALTNSGVSGE 283
++EEL+HAK+R A IYAE G G S AYH++ P A G CM+ +L ++G++ E
Sbjct: 240 VVEELEHAKKRNATIYAEIIGFGMSGDAYHMTRPDPEAEGFTTCMKNSLRDAGIAPE 296
>sp|P55338|FABF_VIBHA 3-oxoacyl-[acyl-carrier-protein] synthase 2 OS=Vibrio harveyi
GN=fabF PE=3 SV=2
Length = 415
Score = 181 bits (460), Expect = 5e-45, Method: Compositional matrix adjust.
Identities = 115/298 (38%), Positives = 157/298 (52%), Gaps = 41/298 (13%)
Query: 21 KRRVVVTGLGAVTPLGDDAHLFYTKLLEGVSGISQIEGFDCSELPTRIAGEIKTLSTDGL 80
KRRVVVTG+G ++P+G+ + LLEG SGI IE FD + TR AG +K
Sbjct: 3 KRRVVVTGMGMLSPVGNTVESSWKALLEGQSGIVNIEHFDATNFSTRFAGLVKDFDCTEY 62
Query: 81 VPPKHAKRADNYLIYALIAGKKALADAG--ITEQVSGELNKNRCGVLIGTAMGSMRALKD 138
+ K A++ D ++ Y + AG +AL D+G ITE+ N R GV IG+ +G + ++
Sbjct: 63 MSKKDARKMDLFIQYGIAAGIQALDDSGLEITEE-----NAARVGVAIGSGIGGLDLIEA 117
Query: 139 GIDAI------KIS---------------------------YKKMTCATGNCCILTAANH 165
G A+ K+S C TG I AA
Sbjct: 118 GHSALVEKGPRKVSPFFVPSTIVNMVAGNLSIMRGLRGPNIAISTACTTGLHNIGHAARM 177
Query: 166 IIEGDADMMLCGGSDGVIIPECIAGFIACNNLSRRNSDPTKASRPWDSDHDGFVMGEGAG 225
I GDA+ M+ GG++ P +AGF A LS RN +P KASRPWD DGFV+G+GAG
Sbjct: 178 IAYGDAEAMVAGGAEKASTPLGMAGFGAAKALSTRNDEPQKASRPWDKGRDGFVLGDGAG 237
Query: 226 VMLLEELDHAKRRRANIYAEFKG-GSSTYAYHISEPRLNALGAMACMEKALTNSGVSG 282
VM+LEE +HAK R A IYAE G G S AYH++ P + G ME A+ ++ ++G
Sbjct: 238 VMVLEEYEHAKARGAKIYAELVGFGMSGDAYHMTSPSEDGSGGALAMEAAMRDANITG 295
>sp|O34340|FABF_BACSU 3-oxoacyl-[acyl-carrier-protein] synthase 2 OS=Bacillus subtilis
(strain 168) GN=fabF PE=3 SV=1
Length = 413
Score = 175 bits (444), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 108/299 (36%), Positives = 160/299 (53%), Gaps = 42/299 (14%)
Query: 21 KRRVVVTGLGAVTPLGDDAHLFYTKLLEGVSGISQIEGFDCSELPTRIAGEIKTLSTDGL 80
K+RVVVTGLGA++PLG+D + + GVSGI I D E P ++A E+K + +
Sbjct: 3 KKRVVVTGLGALSPLGNDVDTSWNNAINGVSGIGPITRVDAEEYPAKVAAELKDFNVEDY 62
Query: 81 VPPKHAKRADNYLIYALIAGKKALADA--GITEQVSGELNKNRCGVLIGTAMGSMRALKD 138
+ K A++ D + YA++A K A+ DA IT++++ R GV +G+ +G + L+
Sbjct: 63 MDKKEARKMDRFTQYAVVAAKMAVEDADLNITDEIA-----PRVGVWVGSGIGGLETLES 117
Query: 139 GID---------------------------AIKISYKKMT------CATGNCCILTAANH 165
+ +I + K + CATG I A
Sbjct: 118 QFEIFLTKGPRRVSPFFVPMMIPDMATGQISIALGAKGVNSCTVTACATGTNSIGDAFKV 177
Query: 166 IIEGDADMMLCGGSDGVIIPECIAGFIACNNLSRRNSDPTKASRPWDSDHDGFVMGEGAG 225
I GDAD+M+ GG++ + AGF A LS N DP ASRP+D + DGFVMGEGAG
Sbjct: 178 IQRGDADVMVTGGTEAPLTRMSFAGFSANKALS-TNPDPKTASRPFDKNRDGFVMGEGAG 236
Query: 226 VMLLEELDHAKRRRANIYAEFKG-GSSTYAYHISEPRLNALGAMACMEKALTNSGVSGE 283
+++LEEL+HA R A IY E G GS+ AYHI+ P + G M++A+ ++G++ E
Sbjct: 237 IIVLEELEHALARGAKIYGEIVGYGSTGDAYHITAPAQDGEGGARAMQEAIKDAGIAPE 295
>sp|P56902|FABF_RHIME 3-oxoacyl-[acyl-carrier-protein] synthase 2 OS=Rhizobium meliloti
(strain 1021) GN=fabF PE=3 SV=2
Length = 421
Score = 159 bits (402), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 110/302 (36%), Positives = 163/302 (53%), Gaps = 44/302 (14%)
Query: 22 RRVVVTGLGAVTPLGDDAHLFYTKLLEGVSGISQIEGFDCSELPTRIA-------GEIKT 74
RRVV+TG G V+PLG + + +LL G + ++ F+ +LP +IA G T
Sbjct: 2 RRVVITGTGMVSPLGCGTEVSWARLLTGDNAARKVTEFEVEDLPAKIACRIPFGDGSDGT 61
Query: 75 LSTDGLVPPKHAKRADNYLIYALIAGKKALADAGITEQVSGELNKNRCGVLIGTAMGSMR 134
+ D + PK ++ D +++YA+ A ALADAG + + ++ GVLIG+ +G +
Sbjct: 62 FNADDWMEPKEQRKVDPFIVYAMAAADMALADAGWKPE--SDEDQISTGVLIGSGIGGLE 119
Query: 135 ALKDG-----------------------IDAIKISYKK----------MTCATGNCCILT 161
+ D + A ++S + C+TG I
Sbjct: 120 GIVDAGYTLRDKGPRRISPFFIPGRLINLAAGQVSIRHKLRGPNHSVVTACSTGAHAIGD 179
Query: 162 AANHIIEGDADMMLCGGSDGVIIPECIAGFIACNNLS-RRNSDPTKASRPWDSDHDGFVM 220
A+ I GDAD+M+ GG++ I +AGF AC LS + N +P KASRP+D+D DGFVM
Sbjct: 180 ASRLIALGDADVMVAGGTESPICRISLAGFAACKALSTQHNDNPEKASRPYDADRDGFVM 239
Query: 221 GEGAGVMLLEELDHAKRRRANIYAEFKG-GSSTYAYHISEPRLNALGAMACMEKALTNSG 279
GEGAG+++LEEL+HA+ R A IYAE G G S A+HI+ P + GA CM+ AL +G
Sbjct: 240 GEGAGIVVLEELEHARARGAKIYAEVIGYGLSGDAFHITAPSEDGEGAYRCMQMALKRAG 299
Query: 280 VS 281
V+
Sbjct: 300 VT 301
>sp|P0AAI8|FABF_SHIFL 3-oxoacyl-[acyl-carrier-protein] synthase 2 OS=Shigella flexneri
GN=fabF PE=3 SV=2
Length = 413
Score = 159 bits (402), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 101/272 (37%), Positives = 150/272 (55%), Gaps = 33/272 (12%)
Query: 21 KRRVVVTGLGAVTPLGDDAHLFYTKLLEGVSGISQIEGFDCSELPTRIAGEIKTLSTDGL 80
KRRVVVTGLG ++P+G+ + LL G SGIS I+ FD S T+ AG +K + + +
Sbjct: 3 KRRVVVTGLGMLSPVGNTVESTWKALLAGQSGISLIDHFDTSAYATKFAGLVKDFNCEDI 62
Query: 81 VPPKHAKRADNYLIYALIAGKKALADAG--ITEQ--------------VSGELNKNRCGV 124
+ K ++ D ++ Y ++AG +A+ D+G ITE+ G + +N +
Sbjct: 63 ISRKEQRKMDAFIQYGIVAGVQAMQDSGLEITEENATRIGAAIGSGIGGLGLIEENHTSL 122
Query: 125 LIG-----------TAMGSMRA----LKDGIDAIKISYKKMTCATGNCCILTAANHIIEG 169
+ G + + +M A + G+ IS C +G I AA I G
Sbjct: 123 MNGGPRKISPFFVPSTIVNMVAGHLTIMYGLRGPSISIAT-ACTSGVHNIGHAARIIAYG 181
Query: 170 DADMMLCGGSDGVIIPECIAGFIACNNLSRRNSDPTKASRPWDSDHDGFVMGEGAGVMLL 229
DAD+M+ GG++ P + GF A LS RN +P ASRPWD + DGFV+G+GAG+++L
Sbjct: 182 DADVMVAGGAEKASTPLGVGGFGAARALSTRNDNPQAASRPWDKERDGFVLGDGAGMLVL 241
Query: 230 EELDHAKRRRANIYAEFKG-GSSTYAYHISEP 260
EE +HAK+R A IYAE G G S+ AYH++ P
Sbjct: 242 EEYEHAKKRGAKIYAELVGFGMSSDAYHMTSP 273
>sp|P0AAI5|FABF_ECOLI 3-oxoacyl-[acyl-carrier-protein] synthase 2 OS=Escherichia coli
(strain K12) GN=fabF PE=1 SV=2
Length = 413
Score = 159 bits (402), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 101/272 (37%), Positives = 150/272 (55%), Gaps = 33/272 (12%)
Query: 21 KRRVVVTGLGAVTPLGDDAHLFYTKLLEGVSGISQIEGFDCSELPTRIAGEIKTLSTDGL 80
KRRVVVTGLG ++P+G+ + LL G SGIS I+ FD S T+ AG +K + + +
Sbjct: 3 KRRVVVTGLGMLSPVGNTVESTWKALLAGQSGISLIDHFDTSAYATKFAGLVKDFNCEDI 62
Query: 81 VPPKHAKRADNYLIYALIAGKKALADAG--ITEQ--------------VSGELNKNRCGV 124
+ K ++ D ++ Y ++AG +A+ D+G ITE+ G + +N +
Sbjct: 63 ISRKEQRKMDAFIQYGIVAGVQAMQDSGLEITEENATRIGAAIGSGIGGLGLIEENHTSL 122
Query: 125 LIG-----------TAMGSMRA----LKDGIDAIKISYKKMTCATGNCCILTAANHIIEG 169
+ G + + +M A + G+ IS C +G I AA I G
Sbjct: 123 MNGGPRKISPFFVPSTIVNMVAGHLTIMYGLRGPSISIAT-ACTSGVHNIGHAARIIAYG 181
Query: 170 DADMMLCGGSDGVIIPECIAGFIACNNLSRRNSDPTKASRPWDSDHDGFVMGEGAGVMLL 229
DAD+M+ GG++ P + GF A LS RN +P ASRPWD + DGFV+G+GAG+++L
Sbjct: 182 DADVMVAGGAEKASTPLGVGGFGAARALSTRNDNPQAASRPWDKERDGFVLGDGAGMLVL 241
Query: 230 EELDHAKRRRANIYAEFKG-GSSTYAYHISEP 260
EE +HAK+R A IYAE G G S+ AYH++ P
Sbjct: 242 EEYEHAKKRGAKIYAELVGFGMSSDAYHMTSP 273
>sp|P0AAI6|FABF_ECOL6 3-oxoacyl-[acyl-carrier-protein] synthase 2 OS=Escherichia coli
O6:H1 (strain CFT073 / ATCC 700928 / UPEC) GN=fabF PE=3
SV=2
Length = 413
Score = 159 bits (402), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 101/272 (37%), Positives = 150/272 (55%), Gaps = 33/272 (12%)
Query: 21 KRRVVVTGLGAVTPLGDDAHLFYTKLLEGVSGISQIEGFDCSELPTRIAGEIKTLSTDGL 80
KRRVVVTGLG ++P+G+ + LL G SGIS I+ FD S T+ AG +K + + +
Sbjct: 3 KRRVVVTGLGMLSPVGNTVESTWKALLAGQSGISLIDHFDTSAYATKFAGLVKDFNCEDI 62
Query: 81 VPPKHAKRADNYLIYALIAGKKALADAG--ITEQ--------------VSGELNKNRCGV 124
+ K ++ D ++ Y ++AG +A+ D+G ITE+ G + +N +
Sbjct: 63 ISRKEQRKMDAFIQYGIVAGVQAMQDSGLEITEENATRIGAAIGSGIGGLGLIEENHTSL 122
Query: 125 LIG-----------TAMGSMRA----LKDGIDAIKISYKKMTCATGNCCILTAANHIIEG 169
+ G + + +M A + G+ IS C +G I AA I G
Sbjct: 123 MNGGPRKISPFFVPSTIVNMVAGHLTIMYGLRGPSISIAT-ACTSGVHNIGHAARIIAYG 181
Query: 170 DADMMLCGGSDGVIIPECIAGFIACNNLSRRNSDPTKASRPWDSDHDGFVMGEGAGVMLL 229
DAD+M+ GG++ P + GF A LS RN +P ASRPWD + DGFV+G+GAG+++L
Sbjct: 182 DADVMVAGGAEKASTPLGVGGFGAARALSTRNDNPQAASRPWDKERDGFVLGDGAGMLVL 241
Query: 230 EELDHAKRRRANIYAEFKG-GSSTYAYHISEP 260
EE +HAK+R A IYAE G G S+ AYH++ P
Sbjct: 242 EEYEHAKKRGAKIYAELVGFGMSSDAYHMTSP 273
>sp|P0AAI7|FABF_ECO57 3-oxoacyl-[acyl-carrier-protein] synthase 2 OS=Escherichia coli
O157:H7 GN=fabF PE=3 SV=2
Length = 413
Score = 159 bits (402), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 101/272 (37%), Positives = 150/272 (55%), Gaps = 33/272 (12%)
Query: 21 KRRVVVTGLGAVTPLGDDAHLFYTKLLEGVSGISQIEGFDCSELPTRIAGEIKTLSTDGL 80
KRRVVVTGLG ++P+G+ + LL G SGIS I+ FD S T+ AG +K + + +
Sbjct: 3 KRRVVVTGLGMLSPVGNTVESTWKALLAGQSGISLIDHFDTSAYATKFAGLVKDFNCEDI 62
Query: 81 VPPKHAKRADNYLIYALIAGKKALADAG--ITEQ--------------VSGELNKNRCGV 124
+ K ++ D ++ Y ++AG +A+ D+G ITE+ G + +N +
Sbjct: 63 ISRKEQRKMDAFIQYGIVAGVQAMQDSGLEITEENATRIGAAIGSGIGGLGLIEENHTSL 122
Query: 125 LIG-----------TAMGSMRA----LKDGIDAIKISYKKMTCATGNCCILTAANHIIEG 169
+ G + + +M A + G+ IS C +G I AA I G
Sbjct: 123 MNGGPRKISPFFVPSTIVNMVAGHLTIMYGLRGPSISIAT-ACTSGVHNIGHAARIIAYG 181
Query: 170 DADMMLCGGSDGVIIPECIAGFIACNNLSRRNSDPTKASRPWDSDHDGFVMGEGAGVMLL 229
DAD+M+ GG++ P + GF A LS RN +P ASRPWD + DGFV+G+GAG+++L
Sbjct: 182 DADVMVAGGAEKASTPLGVGGFGAARALSTRNDNPQAASRPWDKERDGFVLGDGAGMLVL 241
Query: 230 EELDHAKRRRANIYAEFKG-GSSTYAYHISEP 260
EE +HAK+R A IYAE G G S+ AYH++ P
Sbjct: 242 EEYEHAKKRGAKIYAELVGFGMSSDAYHMTSP 273
>sp|Q8NXE1|FABF_STAAW 3-oxoacyl-[acyl-carrier-protein] synthase 2 OS=Staphylococcus
aureus (strain MW2) GN=fabF PE=1 SV=1
Length = 414
Score = 156 bits (394), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 99/303 (32%), Positives = 154/303 (50%), Gaps = 58/303 (19%)
Query: 22 RRVVVTGLGAVTPLGDDAHLFYTKLLEGVSGISQIEGFDCSELPTRIAGEIKTLSTDGLV 81
+RVV+TG+GA++P+G+D + L+GV+GI +I D +AGE+K + + +
Sbjct: 5 KRVVITGMGALSPIGNDVKTTWENALKGVNGIDKITRIDTEPYSVHLAGELKNFNIEDHI 64
Query: 82 PPKHAKRADNYLIYALIAGKKALADAGITEQVSGELNKN---RCGVLIGTAMGSMRALKD 138
K A+R D + YA++A ++A+ DA + ++N+N R GV IG+ +G
Sbjct: 65 DKKEARRMDRFTQYAIVAAREAVKDAQL------DINENTADRIGVWIGSGIG------- 111
Query: 139 GIDAIKISYKKM----------------------------------------TCATGNCC 158
G++ +I++K++ CATG
Sbjct: 112 GMETFEIAHKQLMDKGPRRVSPFFVPMLIPDMATGQVSIDLGAKGPNGATVTACATGTNS 171
Query: 159 ILTAANHIIEGDADMMLCGGSDGVIIPECIAGFIACNNLSRRNSDPTKASRPWDSDHDGF 218
I A + GDAD M+ GG++ I IAGF A LS N D A RP+ DGF
Sbjct: 172 IGEAFKIVQRGDADAMITGGTEAPITHMAIAGFSASRALST-NDDIETACRPFQEGRDGF 230
Query: 219 VMGEGAGVMLLEELDHAKRRRANIYAEFKG-GSSTYAYHISEPRLNALGAMACMEKALTN 277
VMGEGAG++++E L+ A+ R ANIYAE G G++ AYHI+ P G M+ A+ +
Sbjct: 231 VMGEGAGILVIESLESAQARGANIYAEIVGYGTTGDAYHITAPAPEGEGGSRAMQAAMDD 290
Query: 278 SGV 280
+G+
Sbjct: 291 AGI 293
>sp|Q6GAU2|FABF_STAAS 3-oxoacyl-[acyl-carrier-protein] synthase 2 OS=Staphylococcus
aureus (strain MSSA476) GN=fabF PE=3 SV=1
Length = 414
Score = 156 bits (394), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 99/303 (32%), Positives = 154/303 (50%), Gaps = 58/303 (19%)
Query: 22 RRVVVTGLGAVTPLGDDAHLFYTKLLEGVSGISQIEGFDCSELPTRIAGEIKTLSTDGLV 81
+RVV+TG+GA++P+G+D + L+GV+GI +I D +AGE+K + + +
Sbjct: 5 KRVVITGMGALSPIGNDVKTTWENALKGVNGIDKITRIDTEPYSVHLAGELKNFNIEDHI 64
Query: 82 PPKHAKRADNYLIYALIAGKKALADAGITEQVSGELNKN---RCGVLIGTAMGSMRALKD 138
K A+R D + YA++A ++A+ DA + ++N+N R GV IG+ +G
Sbjct: 65 DKKEARRMDRFTQYAIVAAREAVKDAQL------DINENTADRIGVWIGSGIG------- 111
Query: 139 GIDAIKISYKKM----------------------------------------TCATGNCC 158
G++ +I++K++ CATG
Sbjct: 112 GMETFEIAHKQLMDKGPRRVSPFFVPMLIPDMATGQVSIDLGAKGPNGATVTACATGTNS 171
Query: 159 ILTAANHIIEGDADMMLCGGSDGVIIPECIAGFIACNNLSRRNSDPTKASRPWDSDHDGF 218
I A + GDAD M+ GG++ I IAGF A LS N D A RP+ DGF
Sbjct: 172 IGEAFKIVQRGDADAMITGGTEAPITHMAIAGFSASRALST-NDDIETACRPFQEGRDGF 230
Query: 219 VMGEGAGVMLLEELDHAKRRRANIYAEFKG-GSSTYAYHISEPRLNALGAMACMEKALTN 277
VMGEGAG++++E L+ A+ R ANIYAE G G++ AYHI+ P G M+ A+ +
Sbjct: 231 VMGEGAGILVIESLESAQARGANIYAEIVGYGTTGDAYHITAPAPEGEGGSRAMQAAMDD 290
Query: 278 SGV 280
+G+
Sbjct: 291 AGI 293
>sp|Q5HHA1|FABF_STAAC 3-oxoacyl-[acyl-carrier-protein] synthase 2 OS=Staphylococcus
aureus (strain COL) GN=fabF PE=1 SV=1
Length = 414
Score = 156 bits (394), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 99/303 (32%), Positives = 154/303 (50%), Gaps = 58/303 (19%)
Query: 22 RRVVVTGLGAVTPLGDDAHLFYTKLLEGVSGISQIEGFDCSELPTRIAGEIKTLSTDGLV 81
+RVV+TG+GA++P+G+D + L+GV+GI +I D +AGE+K + + +
Sbjct: 5 KRVVITGMGALSPIGNDVKTTWENALKGVNGIDKITRIDTEPYSVHLAGELKNFNIEDHI 64
Query: 82 PPKHAKRADNYLIYALIAGKKALADAGITEQVSGELNKN---RCGVLIGTAMGSMRALKD 138
K A+R D + YA++A ++A+ DA + ++N+N R GV IG+ +G
Sbjct: 65 DKKEARRMDRFTQYAIVAAREAVKDAQL------DINENTADRIGVWIGSGIG------- 111
Query: 139 GIDAIKISYKKM----------------------------------------TCATGNCC 158
G++ +I++K++ CATG
Sbjct: 112 GMETFEIAHKQLMDKGPRRVSPFFVPMLIPDMATGQVSIDLGAKGPNGATVTACATGTNS 171
Query: 159 ILTAANHIIEGDADMMLCGGSDGVIIPECIAGFIACNNLSRRNSDPTKASRPWDSDHDGF 218
I A + GDAD M+ GG++ I IAGF A LS N D A RP+ DGF
Sbjct: 172 IGEAFKIVQRGDADAMITGGTEAPITHMAIAGFSASRALST-NDDIETACRPFQEGRDGF 230
Query: 219 VMGEGAGVMLLEELDHAKRRRANIYAEFKG-GSSTYAYHISEPRLNALGAMACMEKALTN 277
VMGEGAG++++E L+ A+ R ANIYAE G G++ AYHI+ P G M+ A+ +
Sbjct: 231 VMGEGAGILVIESLESAQARGANIYAEIVGYGTTGDAYHITAPAPEGEGGSRAMQAAMDD 290
Query: 278 SGV 280
+G+
Sbjct: 291 AGI 293
>sp|Q7A6F8|FABF_STAAN 3-oxoacyl-[acyl-carrier-protein] synthase 2 OS=Staphylococcus
aureus (strain N315) GN=fabF PE=1 SV=1
Length = 414
Score = 155 bits (392), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 99/304 (32%), Positives = 153/304 (50%), Gaps = 58/304 (19%)
Query: 21 KRRVVVTGLGAVTPLGDDAHLFYTKLLEGVSGISQIEGFDCSELPTRIAGEIKTLSTDGL 80
+RVV+TG+GA++P+G+D + L+GV+GI +I D +AGE+K + +
Sbjct: 4 NKRVVITGMGALSPIGNDVKTTWENALKGVNGIDKITRIDTEPYSVHLAGELKNFNIEDH 63
Query: 81 VPPKHAKRADNYLIYALIAGKKALADAGITEQVSGELNKN---RCGVLIGTAMGSMRALK 137
+ K A+R D + YA++A ++A+ DA + ++N N R GV IG+ +G
Sbjct: 64 IDKKEARRMDRFTQYAIVAAREAVKDAQL------DINDNTADRIGVWIGSGIG------ 111
Query: 138 DGIDAIKISYKKM----------------------------------------TCATGNC 157
G++ +I++K++ CATG
Sbjct: 112 -GMETFEIAHKQLMDKGPRRVSPFFVPMLIPDMATGQVSIDLGAKGPNGATVTACATGTN 170
Query: 158 CILTAANHIIEGDADMMLCGGSDGVIIPECIAGFIACNNLSRRNSDPTKASRPWDSDHDG 217
I A + GDAD M+ GG++ I IAGF A LS N D A RP+ DG
Sbjct: 171 SIGEAFKIVQRGDADAMITGGTEAPITHMAIAGFSASRALST-NDDIETACRPFQEGRDG 229
Query: 218 FVMGEGAGVMLLEELDHAKRRRANIYAEFKG-GSSTYAYHISEPRLNALGAMACMEKALT 276
FVMGEGAG++++E L+ A+ R ANIYAE G G++ AYHI+ P G M+ A+
Sbjct: 230 FVMGEGAGILVIESLESAQARGANIYAEIVGYGTTGDAYHITAPAPEGEGGSRAMQAAMD 289
Query: 277 NSGV 280
++G+
Sbjct: 290 DAGI 293
>sp|Q99VA6|FABF_STAAM 3-oxoacyl-[acyl-carrier-protein] synthase 2 OS=Staphylococcus
aureus (strain Mu50 / ATCC 700699) GN=fabF PE=1 SV=1
Length = 414
Score = 155 bits (392), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 99/304 (32%), Positives = 153/304 (50%), Gaps = 58/304 (19%)
Query: 21 KRRVVVTGLGAVTPLGDDAHLFYTKLLEGVSGISQIEGFDCSELPTRIAGEIKTLSTDGL 80
+RVV+TG+GA++P+G+D + L+GV+GI +I D +AGE+K + +
Sbjct: 4 NKRVVITGMGALSPIGNDVKTTWENALKGVNGIDKITRIDTEPYSVHLAGELKNFNIEDH 63
Query: 81 VPPKHAKRADNYLIYALIAGKKALADAGITEQVSGELNKN---RCGVLIGTAMGSMRALK 137
+ K A+R D + YA++A ++A+ DA + ++N N R GV IG+ +G
Sbjct: 64 IDKKEARRMDRFTQYAIVAAREAVKDAQL------DINDNTADRIGVWIGSGIG------ 111
Query: 138 DGIDAIKISYKKM----------------------------------------TCATGNC 157
G++ +I++K++ CATG
Sbjct: 112 -GMETFEIAHKQLMDKGPRRVSPFFVPMLIPDMATGQVSIDLGAKGPNGATVTACATGTN 170
Query: 158 CILTAANHIIEGDADMMLCGGSDGVIIPECIAGFIACNNLSRRNSDPTKASRPWDSDHDG 217
I A + GDAD M+ GG++ I IAGF A LS N D A RP+ DG
Sbjct: 171 SIGEAFKIVQRGDADAMITGGTEAPITHMAIAGFSASRALST-NDDIETACRPFQEGRDG 229
Query: 218 FVMGEGAGVMLLEELDHAKRRRANIYAEFKG-GSSTYAYHISEPRLNALGAMACMEKALT 276
FVMGEGAG++++E L+ A+ R ANIYAE G G++ AYHI+ P G M+ A+
Sbjct: 230 FVMGEGAGILVIESLESAQARGANIYAEIVGYGTTGDAYHITAPAPEGEGGSRAMQAAMD 289
Query: 277 NSGV 280
++G+
Sbjct: 290 DAGI 293
>sp|Q6GIA3|FABF_STAAR 3-oxoacyl-[acyl-carrier-protein] synthase 2 OS=Staphylococcus
aureus (strain MRSA252) GN=fabF PE=3 SV=1
Length = 414
Score = 155 bits (391), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 99/302 (32%), Positives = 153/302 (50%), Gaps = 58/302 (19%)
Query: 23 RVVVTGLGAVTPLGDDAHLFYTKLLEGVSGISQIEGFDCSELPTRIAGEIKTLSTDGLVP 82
RVV+TG+GA++P+G+D + L+GV+GI +I D +AGE+K + + +
Sbjct: 6 RVVITGMGALSPIGNDVKTTWENALKGVNGIDKITRIDTEPYSVHLAGELKNFNIEDHID 65
Query: 83 PKHAKRADNYLIYALIAGKKALADAGITEQVSGELNKN---RCGVLIGTAMGSMRALKDG 139
K A+R D + YA++A ++A+ DA + ++N+N R GV IG+ +G G
Sbjct: 66 KKEARRMDRFTQYAIVAAREAVKDAQL------DINENTADRIGVWIGSGIG-------G 112
Query: 140 IDAIKISYKKM----------------------------------------TCATGNCCI 159
++ +I++K++ CATG I
Sbjct: 113 METFEIAHKQLMDKGPRRVSPFFVPMLIPDMATGQVSIDLGAKGPNGATVTACATGTNSI 172
Query: 160 LTAANHIIEGDADMMLCGGSDGVIIPECIAGFIACNNLSRRNSDPTKASRPWDSDHDGFV 219
A + GDAD M+ GG++ I IAGF A LS N D A RP+ DGFV
Sbjct: 173 GEAFKIVQRGDADAMITGGTEAPITHMAIAGFSASRALST-NDDIETACRPFQEGRDGFV 231
Query: 220 MGEGAGVMLLEELDHAKRRRANIYAEFKG-GSSTYAYHISEPRLNALGAMACMEKALTNS 278
MGEGAG++++E L+ A+ R ANIYAE G G++ AYHI+ P G M+ A+ ++
Sbjct: 232 MGEGAGILVIESLESAQARGANIYAEIVGYGTTGDAYHITAPAPEGEGGSRAMQAAMDDA 291
Query: 279 GV 280
G+
Sbjct: 292 GI 293
>sp|Q5TKS0|FABF_STAAU 3-oxoacyl-[acyl-carrier-protein] synthase 2 (Fragment)
OS=Staphylococcus aureus GN=fabF PE=3 SV=1
Length = 403
Score = 150 bits (380), Expect = 8e-36, Method: Compositional matrix adjust.
Identities = 97/300 (32%), Positives = 151/300 (50%), Gaps = 58/300 (19%)
Query: 25 VVTGLGAVTPLGDDAHLFYTKLLEGVSGISQIEGFDCSELPTRIAGEIKTLSTDGLVPPK 84
V+TG+GA++P+G+D + L+GV+GI +I D +AGE+K + + + K
Sbjct: 1 VITGMGALSPIGNDVKTTWENALKGVNGIDKITRIDTEPYSVHLAGELKNFNIEDHIDKK 60
Query: 85 HAKRADNYLIYALIAGKKALADAGITEQVSGELNKN---RCGVLIGTAMGSMRALKDGID 141
A+R D + YA++A ++A+ DA + ++N+N R GV IG+ +G G++
Sbjct: 61 EARRMDRFTQYAIVAAREAVKDAQL------DINENTADRIGVWIGSGIG-------GME 107
Query: 142 AIKISYKKM----------------------------------------TCATGNCCILT 161
+I++K++ CATG I
Sbjct: 108 TFEIAHKQLMDKGPRRVSPFFVPMLIPDMATGQVSIDLGAKGPNGATVTACATGTNSIGE 167
Query: 162 AANHIIEGDADMMLCGGSDGVIIPECIAGFIACNNLSRRNSDPTKASRPWDSDHDGFVMG 221
A + GDAD M+ GG++ I IAGF A LS N D A RP+ DGFVMG
Sbjct: 168 AFKIVQRGDADAMITGGTEAPITHMAIAGFSASRALST-NDDIETACRPFQEGRDGFVMG 226
Query: 222 EGAGVMLLEELDHAKRRRANIYAEFKG-GSSTYAYHISEPRLNALGAMACMEKALTNSGV 280
EGAG++++E L+ A+ R ANIYAE G G++ AYHI+ P G M+ A+ ++G+
Sbjct: 227 EGAGILVIESLESAQARGANIYAEIVGYGTTGDAYHITAPAPEGEGGSRAMQAAMDDAGI 286
>sp|Q9NWU1|OXSM_HUMAN 3-oxoacyl-[acyl-carrier-protein] synthase, mitochondrial OS=Homo
sapiens GN=OXSM PE=1 SV=1
Length = 459
Score = 145 bits (367), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 106/304 (34%), Positives = 144/304 (47%), Gaps = 43/304 (14%)
Query: 20 VKRRVVVTGLGAVTPLGDDAHLFYTKLLEGVSGISQIEGFDCSELPTRIAGEIKTLSTDG 79
+ RRVV+TG+G VTPLG HL + +L+ G SGI + G + +P +A + S +G
Sbjct: 40 LHRRVVITGIGLVTPLGVGTHLVWDRLIGGESGIVSLVGEEYKSIPCSVAAYVPRGSDEG 99
Query: 80 ------LVPPKHAKRADNYLIYALIAGKKALADAGITEQVSGELNKNRCGVLIGTAMGSM 133
V K + I A+ A + A+ D+G Q E ++ GV IG M +
Sbjct: 100 QFNEQNFVSKSDIKSMSSPTIMAIGAAELAMKDSGWHPQ--SEADQVATGVAIGMGMIPL 157
Query: 134 RALKD-------------------------GIDAIKISYK--------KMTCATGNCCIL 160
+ + + I YK C TG +
Sbjct: 158 EVVSETALNFQTKGYNKVSPFFVPKILVNMAAGQVSIRYKLKGPNHAVSTACTTGAHAVG 217
Query: 161 TAANHIIEGDADMMLCGGSDGVIIPECIAGFIACNNLSRRNSDPTKASRPWDSDHDGFVM 220
+ I GDAD+M+ GG+D I P +AGF LS NSDP A RP+ DGFVM
Sbjct: 218 DSFRFIAHGDADVMVAGGTDSCISPLSLAGFSRARALS-TNSDPKLACRPFHPKRDGFVM 276
Query: 221 GEGAGVMLLEELDHAKRRRANIYAEFKG-GSSTYAYHISEPRLNALGAMACMEKALTNSG 279
GEGA V++LEE +HA +RRA IYAE G G S A HI+ P GA+ CM AL ++G
Sbjct: 277 GEGAAVLVLEEYEHAVQRRARIYAEVLGYGLSGDAGHITAPDPEGEGALRCMAAALKDAG 336
Query: 280 VSGE 283
V E
Sbjct: 337 VQPE 340
>sp|Q0VCA7|OXSM_BOVIN 3-oxoacyl-[acyl-carrier-protein] synthase, mitochondrial OS=Bos
taurus GN=OXSM PE=2 SV=1
Length = 460
Score = 144 bits (364), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 101/307 (32%), Positives = 142/307 (46%), Gaps = 43/307 (14%)
Query: 17 APEVKRRVVVTGLGAVTPLGDDAHLFYTKLLEGVSGISQIEGFDCSELPTRIAGEIK--- 73
AP ++RRVV+TG+G VTPLG L + +L+ G SGI + G + +P +A +
Sbjct: 38 APGLRRRVVITGIGLVTPLGVGTQLVWDRLVRGESGIVSLVGDEYQSIPCSVAAYVPRGC 97
Query: 74 ---TLSTDGLVPPKHAKRADNYLIYALIAGKKALADAGITEQVSGELNKNRCGVLIGTAM 130
+ VP K + A+ A + AL DAG Q E ++ GV IG M
Sbjct: 98 DEGQFNEQNFVPKSDTKSMSPPTVMAIAAAELALKDAGWHPQ--SEADQAATGVAIGMGM 155
Query: 131 GSMRALKDGIDAIKIS-YKKMT--------------------------------CATGNC 157
+ + + + Y K++ C TG
Sbjct: 156 VPLEVISETALTFQTKGYSKVSPFFVPKILVNMASGQVSIRHKLKGPNHAVSTACTTGAH 215
Query: 158 CILTAANHIIEGDADMMLCGGSDGVIIPECIAGFIACNNLSRRNSDPTKASRPWDSDHDG 217
+ + + GDAD+M+ GG+D I P +AGF LS N+DP A RP+ DG
Sbjct: 216 AVGDSFRFVAHGDADVMVAGGTDSCISPLSLAGFARARALS-TNTDPKSACRPFHPQRDG 274
Query: 218 FVMGEGAGVMLLEELDHAKRRRANIYAEFKG-GSSTYAYHISEPRLNALGAMACMEKALT 276
FVMGEGA V++LEE HA RR A +YAE G G S A HI+ P GA CM A+
Sbjct: 275 FVMGEGAAVLVLEEHRHALRRGARVYAEIVGYGLSGDAGHITAPDPGGEGAFRCMAAAVK 334
Query: 277 NSGVSGE 283
++G+ E
Sbjct: 335 DAGIQPE 341
>sp|Q9D404|OXSM_MOUSE 3-oxoacyl-[acyl-carrier-protein] synthase, mitochondrial OS=Mus
musculus GN=Oxsm PE=2 SV=1
Length = 459
Score = 141 bits (356), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 103/304 (33%), Positives = 144/304 (47%), Gaps = 43/304 (14%)
Query: 20 VKRRVVVTGLGAVTPLGDDAHLFYTKLLEGVSGISQIEGFDCSELPTRIAGEIK------ 73
++RRVV+TG+G VTPLG L + +LL G SGI + G + +P +A +
Sbjct: 40 LRRRVVITGIGLVTPLGVGTQLVWDRLLRGESGIVSVVGDEYKNIPCSVAAYVPRGPHEG 99
Query: 74 TLSTDGLVPPKHAKRADNYLIYALIAGKKALADAGITEQVSGELNKNRCGVLIGTAMGSM 133
+ + V AK + I A+ A + AL D+G + E ++ GV IG M +
Sbjct: 100 QFNEENFVSKSDAKSMSSSTIMAVGAAELALKDSGWHPKR--EADQVATGVAIGMGMVPL 157
Query: 134 RALKD-------------------------GIDAIKISYK--------KMTCATGNCCIL 160
+ + + I YK C TG +
Sbjct: 158 EVISETALLFQTKGYNKVSPFFVPKILINMAAGQVSIRYKLKGPNHSVSTACTTGAHAVG 217
Query: 161 TAANHIIEGDADMMLCGGSDGVIIPECIAGFIACNNLSRRNSDPTKASRPWDSDHDGFVM 220
+ I GDAD+M+ GG+D I P +AGF LS N DP A RP+ + DGFVM
Sbjct: 218 DSFRFIAHGDADVMVAGGTDSCISPLSLAGFSRARALS-SNPDPKLACRPFHPERDGFVM 276
Query: 221 GEGAGVMLLEELDHAKRRRANIYAEFKG-GSSTYAYHISEPRLNALGAMACMEKALTNSG 279
GEGA V++LEE +HA +R A IYAE G G S A HI+ P GA+ CM A+ ++G
Sbjct: 277 GEGAAVLVLEEHEHAVQRGARIYAEILGYGLSGDAGHITAPDPEGEGALRCMAAAVKDAG 336
Query: 280 VSGE 283
VS E
Sbjct: 337 VSPE 340
>sp|O94297|OXSM_SCHPO Putative 3-oxoacyl-[acyl-carrier-protein] synthase, mitochondrial
OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843)
GN=SPBC887.13c PE=3 SV=1
Length = 426
Score = 141 bits (355), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 101/302 (33%), Positives = 155/302 (51%), Gaps = 44/302 (14%)
Query: 22 RRVVVTGLGAVTPLGDDAHLFYTKLLEGVSGISQIEGF-DCSELPTRIAG------EIKT 74
+RVV+TGLGAVTPLG+ + L++G SGI ++GF + ++P+++AG E +
Sbjct: 2 KRVVITGLGAVTPLGNGVKTNWRNLIQGKSGIVSLKGFPEYEQIPSKVAGVIPRGKEKEE 61
Query: 75 LSTDGLVPPKHAKRADNYLIYALIAGKKALADAGITEQVSGELNKNRCGVLIGTAMGSM- 133
+ V + + AL + +AL DA + E K GV GT +G++
Sbjct: 62 WNVLDYVDQGKLREVATFTQLALTSAAEALKDARWID--IDEQEKLATGVCFGTGIGNLD 119
Query: 134 RALKDGIDAIKISYKKMT--------------------------------CATGNCCILT 161
AL + K +K++ CA G I
Sbjct: 120 DALNENGVLNKAGIRKVSPRVISKILINMPAGYISQRYGFTALNHTTTTACAAGCHAIGD 179
Query: 162 AANHIIEGDADMMLCGGSDGVIIPECIAGFIACNNLSRR-NSDPTKASRPWDSDHDGFVM 220
A N I G AD+++ GGS+ I P +AGF +LS + N +P ASRP+D++ DGFV+
Sbjct: 180 AFNFIKLGHADVIIAGGSESCINPLTVAGFSKARSLSTKFNDNPKAASRPFDANRDGFVI 239
Query: 221 GEGAGVMLLEELDHAKRRRANIYAEFKG-GSSTYAYHISEPRLNALGAMACMEKALTNSG 279
GEG+ ++LEEL+HAK R A+IYAE G G ++ +YHI+ P N A M+++L +G
Sbjct: 240 GEGSAALVLEELEHAKNRNAHIYAEIVGYGLASDSYHITAPNPNGDAAYYAMKRSLKQAG 299
Query: 280 VS 281
+S
Sbjct: 300 LS 301
>sp|Q8L3X9|KASM_ARATH 3-oxoacyl-[acyl-carrier-protein] synthase, mitochondrial
OS=Arabidopsis thaliana GN=KAS PE=1 SV=1
Length = 461
Score = 131 bits (330), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 105/309 (33%), Positives = 153/309 (49%), Gaps = 50/309 (16%)
Query: 22 RRVVVTGLGAVTPLGDDAHLFYTKLLEGVSGIS-------QIEGFD-------CSELPTR 67
RRVVVTGLG VTPLG + +L++G GI +++ FD +L ++
Sbjct: 31 RRVVVTGLGMVTPLGRGVETTWRRLIDGECGIRGLTLDDLKMKSFDEETKLYTFDQLSSK 90
Query: 68 IAGEIKTLSTDGLVPPK---HAKRADNYLIYALIAGKKALADAGI--TEQVSGELNKNR- 121
+A + S G ++K N++ YA+ A +AL DA TE+ E
Sbjct: 91 VAAFVPYGSNPGEFDEALWLNSKAVANFIGYAVCAADEALRDAEWLPTEEEEKERTGVSI 150
Query: 122 -------CGVLIGTAMGSMRALK---------------DGIDAIKISYKK------MTCA 153
C ++ + + L+ G ++K ++ CA
Sbjct: 151 GGGIGSICDIVEAAQLICEKRLRRLSPFFIPKILVNMASGHVSMKYGFQGPNHAAVTACA 210
Query: 154 TGNCCILTAANHIIEGDADMMLCGGSDGVIIPECIAGFIACNNLSRR-NSDPTKASRPWD 212
TG I A I GDAD+M+ GG++ I +AGF LS + NS P +ASRP+D
Sbjct: 211 TGAHSIGDATRMIQFGDADVMVAGGTESSIDALSVAGFSRSRALSTKFNSSPQEASRPFD 270
Query: 213 SDHDGFVMGEGAGVMLLEELDHAKRRRANIYAEFKG-GSSTYAYHISEPRLNALGAMACM 271
D DGFV+GEG+GV++LEE +HAKRR A IYAE G G S A+HI++P + GA+ M
Sbjct: 271 CDRDGFVIGEGSGVIVLEEYEHAKRRGAKIYAELCGYGMSGDAHHITQPPEDGKGAVLAM 330
Query: 272 EKALTNSGV 280
+AL SG+
Sbjct: 331 TRALRQSGL 339
>sp|Q02578|KAS1_STRCN Putative polyketide beta-ketoacyl synthase 1 OS=Streptomyces
cyaneus GN=curA PE=3 SV=1
Length = 422
Score = 126 bits (316), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 95/280 (33%), Positives = 135/280 (48%), Gaps = 45/280 (16%)
Query: 20 VKRRVVVTGLGAVTPLGDDAHLFYTKLLEGVSGISQIEGFDCSELPTRIAGEIKTLSTDG 79
+ RRV VTG+G V P G F+ L G + I FD L +RIA E
Sbjct: 1 MTRRVAVTGIGVVAPGGIGVPAFWDLLSSGRTATRGITLFDPEGLRSRIAAECDFDPLAH 60
Query: 80 LVPPKHAKRADNYLIYALIAGKKALADAGITEQVSGELNKNRCGVLIGTAMG-------- 131
+ P+ +RAD Y+ +AL+A +A+ D+GI G N R V +G+A+G
Sbjct: 61 GLDPELVERADRYIQFALVAADEAVTDSGID---FGTENPWRVAVSLGSAVGGTTRLEHD 117
Query: 132 ----SMRALKDGID------AIKISYKKMT---------------------CATGNCCIL 160
S R + +D + ++ T C +G +
Sbjct: 118 YVLVSERGQRWDVDHRAAEPELHRAFSPSTLAADVAERFGAQGPVQTVSTGCTSGLDAVG 177
Query: 161 TAANHIIEGDADMMLCGGSDGVIIPECIAGFIACNNLSRRNSDPTKASRPWDSDHDGFVM 220
A + I EG AD+ + G SD I P +A F A S N DP ASRP+D+ DGFVM
Sbjct: 178 YAFHTIEEGRADVCIAGASDSPISPITMACFDAIKATSPNNDDPEHASRPFDAHRDGFVM 237
Query: 221 GEGAGVMLLEELDHAKRRRANIYAEFKGGSSTY--AYHIS 258
GEGA V++LEEL+HA+ R A++Y E GG +T+ AYH++
Sbjct: 238 GEGAAVLVLEELEHARARGAHVYCEI-GGYATFGNAYHMT 276
>sp|P16540|KAS1_STRVN Granaticin polyketide putative beta-ketoacyl synthase 1
OS=Streptomyces violaceoruber GN=gra-orf1 PE=3 SV=1
Length = 421
Score = 125 bits (313), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 84/279 (30%), Positives = 133/279 (47%), Gaps = 43/279 (15%)
Query: 20 VKRRVVVTGLGAVTPLGDDAHLFYTKLLEGVSGISQIEGFDCSELPTRIAGEIKTLSTDG 79
+ RRVV+TG+G P G F+ L G + I FD S +RIAGEI +
Sbjct: 1 MTRRVVITGVGVRAPGGSGTKEFWDLLTAGRTATRPISFFDASPFRSRIAGEIDFDAVAE 60
Query: 80 LVPPKHAKRADNYLIYALIAGKKALADAGITEQVSGELNKNRCGVLIGTAMGSMRALKD- 138
P+ +R D +A+ + ALAD+G+ +G L+ +R GV +G+A+ S +L++
Sbjct: 61 GFSPREVRRMDRATQFAVACTRDALADSGLD---TGALDPSRIGVALGSAVASATSLENE 117
Query: 139 ----------------------------GIDAIKISYKKMT----------CATGNCCIL 160
G+ ++++ C +G +
Sbjct: 118 YLVMSDSGREWLVDPAHLSPMMFDYLSPGVMPAEVAWAAGAEGPVTMVSDGCTSGLDSVG 177
Query: 161 TAANHIIEGDADMMLCGGSDGVIIPECIAGFIACNNLSRRNSDPTKASRPWDSDHDGFVM 220
A EG AD+++ G +D + P +A F A + RN DP ASRP+D +GFV+
Sbjct: 178 YAVQGTREGSADVVVAGAADTPVSPIVVACFDAIKATTPRNDDPAHASRPFDGTRNGFVL 237
Query: 221 GEGAGVMLLEELDHAKRRRANIYAEFKG-GSSTYAYHIS 258
EGA + +LEE + A+RR A+IYAE G + + AYH++
Sbjct: 238 AEGAAMFVLEEYEAAQRRGAHIYAEVGGYATRSQAYHMT 276
>sp|P23155|KAS1_STRCO Putative polyketide beta-ketoacyl synthase 1 OS=Streptomyces
coelicolor (strain ATCC BAA-471 / A3(2) / M145)
GN=SCO5318 PE=3 SV=1
Length = 423
Score = 124 bits (310), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 90/282 (31%), Positives = 138/282 (48%), Gaps = 49/282 (17%)
Query: 20 VKRRVVVTGLGAVTPLGDDAHLFYTKLLEGVSGISQIEGFDCSELPTRIAGEIKTLSTDG 79
+RRV VTG+G V P G F+ L EG + +I FD S L ++IA E +D
Sbjct: 2 TRRRVAVTGIGVVAPGGIGTPQFWRLLSEGRTATRRISLFDPSGLRSQIAAECDFEPSDH 61
Query: 80 LVPPKHAKRADNYLIYALIAGKKALADAGITEQVSGELNKN---RCGVLIGTAMG----- 131
+ A+R D Y+ +AL+A +A+ DA + ++N+ R G +GTA+G
Sbjct: 62 GLGLATAQRCDRYVQFALVAASEAVRDANL------DMNREDPWRAGATLGTAVGGTTRL 115
Query: 132 -------SMRALKDGID------AIKISYKKMT---------------------CATGNC 157
S R + +D ++ ++ T C +G
Sbjct: 116 EHDYVLVSERGSRWDVDDRRSEPHLERAFTPATLSSAVAEEFGVRGPVQTVSTGCTSGLD 175
Query: 158 CILTAANHIIEGDADMMLCGGSDGVIIPECIAGFIACNNLSRRNSDPTKASRPWDSDHDG 217
+ A + + EG D+ L G +D I P +A F A S N DP ASRP+D+D +G
Sbjct: 176 AVGYAYHAVAEGRVDVCLAGAADSPISPITMACFDAIKATSPNNDDPAHASRPFDADRNG 235
Query: 218 FVMGEGAGVMLLEELDHAKRRRANIYAEFKGGSST-YAYHIS 258
FVMGEGA V++LE+L+HA+ R A++Y E G ++ AYH++
Sbjct: 236 FVMGEGAAVLVLEDLEHARARGADVYCEVSGYATFGNAYHMT 277
>sp|P16538|KAS1_STRGA Tetracenomycin C polyketide putative beta-ketoacyl synthase 1
OS=Streptomyces glaucescens GN=tcmK PE=3 SV=1
Length = 426
Score = 122 bits (306), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 86/278 (30%), Positives = 129/278 (46%), Gaps = 43/278 (15%)
Query: 21 KRRVVVTGLGAVTPLGDDAHLFYTKLLEGVSGISQIEGFDCSELPTRIAGEIKTLSTDGL 80
++RVV+TG+G P G F+ L G + I FD + +RIAGEI
Sbjct: 6 EKRVVITGIGVRAPGGAGTAAFWDLLTAGRTATRTISLFDAAPYRSRIAGEIDFDPIGEG 65
Query: 81 VPPKHAKRADNYLIYALIAGKKALADAGITEQVSGELNKNRCGVLIGTAMGSM------- 133
+ P+ A D A++ ++AL D+G+ +N R GV IGTA+G
Sbjct: 66 LSPRQASTYDRATQLAVVCAREALKDSGLDPAA---VNPERIGVSIGTAVGCTTGLDREY 122
Query: 134 --------RALKDGIDAIK------------------------ISYKKMTCATGNCCILT 161
R L D A++ ++ C +G +
Sbjct: 123 ARVSEGGSRWLVDHTLAVEQLFDYFVPTSICREVAWEAGAEGPVTVVSTGCTSGLDAVGY 182
Query: 162 AANHIIEGDADMMLCGGSDGVIIPECIAGFIACNNLSRRNSDPTKASRPWDSDHDGFVMG 221
I +G AD+++CG +D I P +A F A S N DP ASRP+D + DGFV+G
Sbjct: 183 GTELIRDGRADVVVCGATDAPISPITVACFDAIKATSANNDDPAHASRPFDRNRDGFVLG 242
Query: 222 EGAGVMLLEELDHAKRRRANIYAEFKG-GSSTYAYHIS 258
EG+ V +LEEL A+RR A+ YAE +G + + A+H++
Sbjct: 243 EGSAVFVLEELSAARRRGAHAYAEVRGFATRSNAFHMT 280
>sp|Q05356|KAS1_STRHA Putative polyketide beta-ketoacyl synthase 1 OS=Streptomyces
halstedii GN=sch1 PE=3 SV=1
Length = 422
Score = 119 bits (299), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 85/268 (31%), Positives = 128/268 (47%), Gaps = 42/268 (15%)
Query: 20 VKRRVVVTGLGAVTPLGDDAHLFYTKLLEGVSGISQIEGFDCSELPTRIAGEIKTLSTDG 79
+ RRVVVTG+G V P G A F+ L G + +I FD + L ++IA E +
Sbjct: 1 MSRRVVVTGIGVVAPGGIGAARFWDLLAGGRTATRRISLFDPARLRSQIAAECDFDPSAH 60
Query: 80 LVPPKHAKRADNYLIYALIAGKKALADAGITEQVSGELNKNRCGVLIGTAMGSMRALK-- 137
+ + +R D Y+ +AL+A +A+ DAG+ + + R G ++GTA+G L+
Sbjct: 61 GLDDETVRRCDRYVQFALVATAEAVRDAGLD---TTREDPWRMGAVLGTAVGGTTRLEHD 117
Query: 138 -----DGIDAIKISYKKMT--------------------------------CATGNCCIL 160
+G + +++ C +G +
Sbjct: 118 YVLVSEGGSRWDVDHRRAEPHLHRAFAPSTLASTVAETFGAQGPVQTVSTGCTSGLDAVG 177
Query: 161 TAANHIIEGDADMMLCGGSDGVIIPECIAGFIACNNLSRRNSDPTKASRPWDSDHDGFVM 220
A + I EG AD+ L G SD I P +A F A S N DP ASRP+D+ +GFVM
Sbjct: 178 YAYHAIAEGRADVCLAGASDSPISPITMACFDAIKATSPSNDDPEHASRPFDARRNGFVM 237
Query: 221 GEGAGVMLLEELDHAKRRRANIYAEFKG 248
GEG V++LEEL+HA+ R A++Y E G
Sbjct: 238 GEGGAVLVLEELEHARARGADVYCELAG 265
>sp|Q89AY4|FABB_BUCBP 3-oxoacyl-[acyl-carrier-protein] synthase 1 OS=Buchnera aphidicola
subsp. Baizongia pistaciae (strain Bp) GN=fabB PE=3 SV=1
Length = 407
Score = 117 bits (293), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 94/292 (32%), Positives = 146/292 (50%), Gaps = 41/292 (14%)
Query: 22 RRVVVTGLGAVTPLGDDAHLFYTKLLEGVSGISQIEGFDCSELPTRIAGEIKTLSTDGLV 81
+RVV+TGLG ++ +G++ T LLE SGIS + + S + + + G IK + +
Sbjct: 2 KRVVITGLGIISSIGNNKIEVLTSLLETKSGISFSKEMERSGMRSHVWGNIKLDNYQENI 61
Query: 82 PPKHAKRADNYLIYALIAGKKALADAGITEQVSGELNKNRCGVLIGTAMGSMRALKDGID 141
K + ++ IY+ ++ K+A+ DA +T ++ N R GV+IG++ GS R +G+
Sbjct: 62 DRKIFRFMNDASIYSYLSMKQAIEDAKLTSKMYQ--NNPRVGVIIGSSSGSPRCQINGVS 119
Query: 142 AIKIS-----------YKKMT-----------------------CATGNCCILTAANHII 167
IK + K MT CAT CI A I
Sbjct: 120 IIKKTKRLKSVSPYTVIKSMTSSISACLSTLFKIQGVNYSISSACATSAHCIGNAMELIQ 179
Query: 168 EGDADMMLCGGSDGVIIPECIAGFIACNNLSR-RNSDPTKASRPWDSDHDGFVMGEGAGV 226
G D++ GG + + E F + LS NS P +SR +D DGFV+ GAG+
Sbjct: 180 LGKQDLIFAGGGEE-LSWELACAFDSMGALSTMYNSQPILSSRVFDYYRDGFVISGGAGI 238
Query: 227 MLLEELDHAKRRRANIYAEFKG-GSSTYAYHISEPRLNALGAMACMEKALTN 277
+++EEL++A R A+IYAE G G+S+ Y++ P N GAM CM A++N
Sbjct: 239 LVVEELNYALSRSAHIYAEIVGYGTSSDGYNVVVPSGN--GAMRCMNIAMSN 288
>sp|P0A953|FABB_ECOLI 3-oxoacyl-[acyl-carrier-protein] synthase 1 OS=Escherichia coli
(strain K12) GN=fabB PE=1 SV=1
Length = 406
Score = 110 bits (275), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 90/290 (31%), Positives = 142/290 (48%), Gaps = 42/290 (14%)
Query: 22 RRVVVTGLGAVTPLGDDAHLFYTKLLEGVSGISQIEGFDCSELPTRIAGEIKTLSTDGLV 81
+R V+TGLG V+ +G++ L EG SGI+ + S + + + G +K L T GL+
Sbjct: 2 KRAVITGLGIVSSIGNNQQEVLASLREGRSGITFSQELKDSGMRSHVWGNVK-LDTTGLI 60
Query: 82 PPKHAKRADNYLIYALIAGKKALADAGITEQVSGELNKNRCGVLIGTAMGSMRALKDGID 141
K + + IYA ++ ++A+ADAG++ + N R G++ G+ GS R G D
Sbjct: 61 DRKVVRFMSDASIYAFLSMEQAIADAGLSPEAY--QNNPRVGLIAGSGGGSPRFQVFGAD 118
Query: 142 AIK-----------ISYKKMT-----------------------CATGNCCILTAANHII 167
A++ + K M CAT CI A I
Sbjct: 119 AMRGPRGLKAVGPYVVTKAMASGVSACLATPFKIHGVNYSISSACATSAHCIGNAVEQIQ 178
Query: 168 EGDADMMLCGGSDGVIIPECIAGFIACNNLSRRNSD-PTKASRPWDSDHDGFVMGEGAGV 226
G D++ GG + + E F A LS + +D P KASR +D+ DGFV+ G G+
Sbjct: 179 LGKQDIVFAGGGE-ELCWEMACEFDAMGALSTKYNDTPEKASRTYDAHRDGFVIAGGGGM 237
Query: 227 MLLEELDHAKRRRANIYAEFKG-GSSTYAYHISEPRLNALGAMACMEKAL 275
+++EEL+HA R A+IYAE G G+++ + P + GA+ CM+ A+
Sbjct: 238 VVVEELEHALARGAHIYAEIVGYGATSDGADMVAP--SGEGAVRCMKMAM 285
>sp|P0A954|FABB_ECOL6 3-oxoacyl-[acyl-carrier-protein] synthase 1 OS=Escherichia coli
O6:H1 (strain CFT073 / ATCC 700928 / UPEC) GN=fabB PE=3
SV=1
Length = 406
Score = 110 bits (275), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 90/290 (31%), Positives = 142/290 (48%), Gaps = 42/290 (14%)
Query: 22 RRVVVTGLGAVTPLGDDAHLFYTKLLEGVSGISQIEGFDCSELPTRIAGEIKTLSTDGLV 81
+R V+TGLG V+ +G++ L EG SGI+ + S + + + G +K L T GL+
Sbjct: 2 KRAVITGLGIVSSIGNNQQEVLASLREGRSGITFSQELKDSGMRSHVWGNVK-LDTTGLI 60
Query: 82 PPKHAKRADNYLIYALIAGKKALADAGITEQVSGELNKNRCGVLIGTAMGSMRALKDGID 141
K + + IYA ++ ++A+ADAG++ + N R G++ G+ GS R G D
Sbjct: 61 DRKVVRFMSDASIYAFLSMEQAIADAGLSPEAY--QNNPRVGLIAGSGGGSPRFQVFGAD 118
Query: 142 AIK-----------ISYKKMT-----------------------CATGNCCILTAANHII 167
A++ + K M CAT CI A I
Sbjct: 119 AMRGPRGLKAVGPYVVTKAMASGVSACLATPFKIHGVNYSISSACATSAHCIGNAVEQIQ 178
Query: 168 EGDADMMLCGGSDGVIIPECIAGFIACNNLSRRNSD-PTKASRPWDSDHDGFVMGEGAGV 226
G D++ GG + + E F A LS + +D P KASR +D+ DGFV+ G G+
Sbjct: 179 LGKQDIVFAGGGE-ELCWEMACEFDAMGALSTKYNDTPEKASRTYDAHRDGFVIAGGGGM 237
Query: 227 MLLEELDHAKRRRANIYAEFKG-GSSTYAYHISEPRLNALGAMACMEKAL 275
+++EEL+HA R A+IYAE G G+++ + P + GA+ CM+ A+
Sbjct: 238 VVVEELEHALARGAHIYAEIVGYGATSDGADMVAP--SGEGAVRCMKMAM 285
>sp|Q02059|KASA_STRCO Actinorhodin polyketide putative beta-ketoacyl synthase 1
OS=Streptomyces coelicolor (strain ATCC BAA-471 / A3(2)
/ M145) GN=SCO5087 PE=1 SV=2
Length = 467
Score = 110 bits (275), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 81/279 (29%), Positives = 122/279 (43%), Gaps = 43/279 (15%)
Query: 20 VKRRVVVTGLGAVTPLGDDAHLFYTKLLEGVSGISQIEGFDCSELPTRIAGEIKTLSTDG 79
+KRRVV+TG+G P G+ F+ L G + +I FD S +++A E
Sbjct: 44 LKRRVVITGVGVRAPGGNGTRQFWELLTSGRTATRRISFFDPSPYRSQVAAEADFDPVAE 103
Query: 80 LVPPKHAKRADNYLIYALIAGKKALADAGITEQVSGELNKNRCGVLIGTAMGSMRALKDG 139
P+ R D +A+ ++A A +G+ L+ R GV +G+A+ + +L+
Sbjct: 104 GFGPRELDRMDRASQFAVACAREAFAASGLDPDT---LDPARVGVSLGSAVAAATSLERE 160
Query: 140 ------------IDAIKISYKKMT---------------------------CATGNCCIL 160
+DA +S C +G +
Sbjct: 161 YLLLSDSGRDWEVDAAWLSRHMFDYLVPSVMPAEVAWAVGAEGPVTMVSTGCTSGLDSVG 220
Query: 161 TAANHIIEGDADMMLCGGSDGVIIPECIAGFIACNNLSRRNSDPTKASRPWDSDHDGFVM 220
A I EG AD+M G +D I P +A F A + RN DP ASRP+D DGFV+
Sbjct: 221 NAVRAIEEGSADVMFAGAADTPITPIVVACFDAIRATTARNDDPEHASRPFDGTRDGFVL 280
Query: 221 GEGAGVMLLEELDHAKRRRANIYAEFKG-GSSTYAYHIS 258
EGA + +LE+ D A R A I+AE G + AYH++
Sbjct: 281 AEGAAMFVLEDYDSALARGARIHAEISGYATRCNAYHMT 319
>sp|P43710|FABB_HAEIN 3-oxoacyl-[acyl-carrier-protein] synthase 1 OS=Haemophilus
influenzae (strain ATCC 51907 / DSM 11121 / KW20 / Rd)
GN=fabB PE=3 SV=1
Length = 406
Score = 107 bits (266), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 87/295 (29%), Positives = 139/295 (47%), Gaps = 53/295 (17%)
Query: 22 RRVVVTGLGAVTPLGDDAHLFYTKLLEGVSGISQIEGFDCSELPTRIAGEIKTLSTDGLV 81
RR V+TG G ++ +G++ L G SGI + F + + +AG IK L
Sbjct: 2 RRTVITGFGIISSIGNNKEEVLASLKAGKSGIEVVPEFVEMNMRSHVAGTIK------LN 55
Query: 82 PPKHAKRADNYLI-----YALIAGKKALADAGITEQVSGELNKNRCGVLIGTAMGSMRAL 136
P +H R + YA ++ ++A+ DAG+TE +++ +R G++IG GS
Sbjct: 56 PSEHIDRKVFRFMGDAAAYAYLSMREAIEDAGLTED---QVSNDRTGLVIGAGTGSAHNQ 112
Query: 137 KDGIDAIK---------------------------------ISYKKMT-CATGNCCILTA 162
DA++ ++Y + CAT CI A
Sbjct: 113 LVACDAVRGPRGVKAIGPYAVTKTMASSVSACLATPYKIRGVNYSMSSACATSAHCIGHA 172
Query: 163 ANHIIEGDADMMLCGGSDGVIIPECIAGFIACNNLSRR-NSDPTKASRPWDSDHDGFVMG 221
I G D++ GG++ + EC F A +S + N P KASR +D++ DGFV+
Sbjct: 173 VELIQLGKQDVVFAGGAE-ELSWECATEFDAMGAVSTKYNETPEKASRAYDANRDGFVIA 231
Query: 222 EGAGVMLLEELDHAKRRRANIYAEFKG-GSSTYAYHISEPRLNALGAMACMEKAL 275
G V+++EEL+HA R A IYAE G G+++ Y + P + GA CM++A+
Sbjct: 232 GGGAVVVVEELEHALARGAKIYAEIVGYGATSDGYDMVAP--SGEGAERCMKQAM 284
>sp|P39525|CEM1_YEAST 3-oxoacyl-[acyl-carrier-protein] synthase homolog OS=Saccharomyces
cerevisiae (strain ATCC 204508 / S288c) GN=CEM1 PE=1
SV=1
Length = 442
Score = 106 bits (265), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 92/311 (29%), Positives = 147/311 (47%), Gaps = 60/311 (19%)
Query: 20 VKRRVVVTGLGAVTPLGDDAHLFYTKLLEGVSGISQI-------EGFDCSE--LPTRI-A 69
+ RRVV+TGLG VTPLG + LL +G++ I E + E +P+ I
Sbjct: 1 MSRRVVITGLGCVTPLGRSLSESWGNLLSSKNGLTPITSLPNYNEDYKLREKSIPSTITV 60
Query: 70 GEI-KTLSTDG------LVPPKHAKRADNYLIYALIAGKKALADAGITEQVSGELNKNRC 122
G+I + + L + +R +++ AL +AL +AG+ +N + C
Sbjct: 61 GKIPENFQNENSAINKLLFTSQDERRTSSFIKLALRTTYEALHNAGLLNPNDITINTSLC 120
Query: 123 -----GVLIGTAMGSMRALKD--------------------------GIDAIKISYKKMT 151
G LIG+ +GS++ + G +IK + + ++
Sbjct: 121 NLDHFGCLIGSGIGSIQDIYQTSLQFHNDNKRINPYFVPKILTNMAAGNVSIKFNLRGLS 180
Query: 152 ------CATGNCCILTAANHIIEGDADMMLCGGSDGVIIPECIAGFIACNNLSRRNSDPT 205
CATGN I A N I G D+ + G S+ + P +AGFI +++
Sbjct: 181 HSVSTACATGNNSIGDAFNFIRLGMQDICVAGASETSLHPLSLAGFIRAKSITTNG---- 236
Query: 206 KASRPWDSDHDGFVMGEGAGVMLLEELDHAKRRRANIYAEFKG-GSSTYAYHISEPRLNA 264
SRP+D+ GFV+GEG G++++E L+HA++R ANI +E G G S+ A HI+ P +
Sbjct: 237 -ISRPFDTQRSGFVLGEGCGMIVMESLEHAQKRNANIISELVGYGLSSDACHITSPPADG 295
Query: 265 LGAMACMEKAL 275
GA +E AL
Sbjct: 296 NGAKRAIEMAL 306
>sp|P63456|FAB2_MYCTU 3-oxoacyl-[acyl-carrier-protein] synthase 2 OS=Mycobacterium
tuberculosis GN=kasB PE=1 SV=1
Length = 417
Score = 102 bits (254), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 93/298 (31%), Positives = 132/298 (44%), Gaps = 49/298 (16%)
Query: 24 VVVTGLGAVTPLGDDAHLFYTKLLEGVSGISQ-----IEGFDCSELPTRIAGEIKTLSTD 78
VVVTG+ T L DA + LL+ SGI +E FD LP RI G + D
Sbjct: 13 VVVTGIAMTTALATDAETTWKLLLDRQSGIRTLDDPFVEEFD---LPVRIGGHLLE-EFD 68
Query: 79 GLVPPKHAKRADNYLIYALIAGKKALADAGITEQVSGELNKNRCGVLIGTAMGSMRALKD 138
+ +R + + ++ +AG S E++ NR V IGT +GS L
Sbjct: 69 HQLTRIELRRMGYLQRMSTVLSRRLWENAG-----SPEVDTNRLMVSIGTGLGSAEELVF 123
Query: 139 GIDAIK---------ISYKK--------------------MT----CATGNCCILTAANH 165
D ++ ++ +K MT CA+G I A
Sbjct: 124 SYDDMRARGMKAVSPLTVQKYMPNGAAAAVGLERHAKAGVMTPVSACASGAEAIARAWQQ 183
Query: 166 IIEGDADMMLCGGSDGVIIPECIAGFIACN-NLSRRNSDPTKASRPWDSDHDGFVMGEGA 224
I+ G+AD +CGG + I IAGF +S N DP A RP+D D DGFV GEG
Sbjct: 184 IVLGEADAAICGGVETRIEAVPIAGFAQMRIVMSTNNDDPAGACRPFDRDRDGFVFGEGG 243
Query: 225 GVMLLEELDHAKRRRANIYAEFKGGSSTY-AYHISEPRLNALGAMACMEKALTNSGVS 281
++L+E +HAK R ANI A G S T +H+ P N A + +A+ +G++
Sbjct: 244 ALLLIETEEHAKARGANILARIMGASITSDGFHMVAPDPNGERAGHAITRAIQLAGLA 301
>sp|P63457|FAB2_MYCBO 3-oxoacyl-[acyl-carrier-protein] synthase 2 OS=Mycobacterium bovis
(strain ATCC BAA-935 / AF2122/97) GN=kasB PE=3 SV=1
Length = 417
Score = 102 bits (254), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 93/298 (31%), Positives = 132/298 (44%), Gaps = 49/298 (16%)
Query: 24 VVVTGLGAVTPLGDDAHLFYTKLLEGVSGISQ-----IEGFDCSELPTRIAGEIKTLSTD 78
VVVTG+ T L DA + LL+ SGI +E FD LP RI G + D
Sbjct: 13 VVVTGIAMTTALATDAETTWKLLLDRQSGIRTLDDPFVEEFD---LPVRIGGHLLE-EFD 68
Query: 79 GLVPPKHAKRADNYLIYALIAGKKALADAGITEQVSGELNKNRCGVLIGTAMGSMRALKD 138
+ +R + + ++ +AG S E++ NR V IGT +GS L
Sbjct: 69 HQLTRIELRRMGYLQRMSTVLSRRLWENAG-----SPEVDTNRLMVSIGTGLGSAEELVF 123
Query: 139 GIDAIK---------ISYKK--------------------MT----CATGNCCILTAANH 165
D ++ ++ +K MT CA+G I A
Sbjct: 124 SYDDMRARGMKAVSPLTVQKYMPNGAAAAVGLERHAKAGVMTPVSACASGAEAIARAWQQ 183
Query: 166 IIEGDADMMLCGGSDGVIIPECIAGFIACN-NLSRRNSDPTKASRPWDSDHDGFVMGEGA 224
I+ G+AD +CGG + I IAGF +S N DP A RP+D D DGFV GEG
Sbjct: 184 IVLGEADAAICGGVETRIEAVPIAGFAQMRIVMSTNNDDPAGACRPFDRDRDGFVFGEGG 243
Query: 225 GVMLLEELDHAKRRRANIYAEFKGGSSTY-AYHISEPRLNALGAMACMEKALTNSGVS 281
++L+E +HAK R ANI A G S T +H+ P N A + +A+ +G++
Sbjct: 244 ALLLIETEEHAKARGANILARIMGASITSDGFHMVAPDPNGERAGHAITRAIQLAGLA 301
>sp|P43678|KAS1_STRRM Oxytetracycline polyketide putative beta-ketoacyl synthase 1
OS=Streptomyces rimosus PE=3 SV=2
Length = 425
Score = 102 bits (253), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 72/249 (28%), Positives = 108/249 (43%), Gaps = 43/249 (17%)
Query: 22 RRVVVTGLGAVTPLGDDAHLFYTKLLEGVSGISQIEGFDCSELPTRIAGEIKTLSTDGLV 81
RRVV+TG+G V P F+ L G + I FD S +++A E +
Sbjct: 8 RRVVITGIGVVAPGDVGTKPFWEMLTAGRTATRPISSFDASPFRSQVAAECDFDPAAEGL 67
Query: 82 PPKHAKRADNYLIYALIAGKKALADAGITEQVSGELNKNRCGVLIGTAMGSMRALK---- 137
+ + D + +A +A ++ALAD+G+T GE + R GV+ GTA G +L
Sbjct: 68 SQRQVRAWDRTMQFAYVAAREALADSGVT----GEADPLRTGVMAGTACGMTMSLDREYA 123
Query: 138 -----------DGIDAIKISYKKMT------------------------CATGNCCILTA 162
D + Y C +G + A
Sbjct: 124 VVSDEGRLWQVDDAHGVPYLYDYFVPSSMAAEIAWLAEAEGPAGVVSAGCTSGIDVLTHA 183
Query: 163 ANHIIEGDADMMLCGGSDGVIIPECIAGFIACNNLSRRNSDPTKASRPWDSDHDGFVMGE 222
A+ + +G A++M+ G SD I P +A F A + RN +P ASRP+D +GFV+GE
Sbjct: 184 ADLVRDGAAEVMVAGASDAAISPITVACFDAIKATTPRNDEPETASRPFDRTRNGFVLGE 243
Query: 223 GAGVMLLEE 231
GA +LEE
Sbjct: 244 GAAFFVLEE 252
>sp|P41175|KAS1_STRCM Putative polyketide beta-ketoacyl synthase 1 OS=Streptomyces
cinnamonensis PE=3 SV=1
Length = 420
Score = 100 bits (250), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 80/282 (28%), Positives = 127/282 (45%), Gaps = 53/282 (18%)
Query: 21 KRRVVVTGLGAVTPLGDDAHLFYTKLLEGVSGISQIEGFDCSELPTRIAGEIKTLSTDGL 80
+RRV +TG+ + P G F+ L EG + I FD + +++A E +
Sbjct: 3 QRRVAITGIEVLAPGGLGRKEFWQLLSEGRTATRGITFFDPAPFRSKVAAEADFCGLENG 62
Query: 81 VPPKHAKRADNYLIYALIAGKKALADAGITEQVSGEL---NKNRCGVLIGTAMGS----- 132
+ P+ +R D +A++ + A+ D+G EL +R GV++G+A+G+
Sbjct: 63 LSPQEVRRMDRAAQFAVVTAR-AVEDSG------AELAAHPPHRIGVVVGSAVGATMGLD 115
Query: 133 --MRALKDG--IDAIKISYK------------------------------KMTCATGNCC 158
R + DG +D + Y C +G
Sbjct: 116 NEYRVVSDGGRLDLVDHRYAVPHLYNYLVPSSFAAEVAWAVGAEGPSTVVSTGCTSGIDA 175
Query: 159 ILTAANHIIEGDADMMLCGGSDGVIIP-ECIAGFIACNNLSRRNSDPTKASRPWDSDHDG 217
+ A + EG D+M+ G D I P C+ A + R+ P ASRP+DS +G
Sbjct: 176 VGIAVELVREGSVDVMVAGAVDAPISPIPCV--LDAIKATTPRHDAPATASRPFDSTRNG 233
Query: 218 FVMGEGAGVMLLEELDHAKRRRANIYAEFKG-GSSTYAYHIS 258
FV+GEGA +LEEL A+RR A+IYAE G + + AYH++
Sbjct: 234 FVLGEGAAFFVLEELHSARRRGAHIYAEIAGYATRSNAYHMT 275
>sp|O69473|FAB2_MYCLE 3-oxoacyl-[acyl-carrier-protein] synthase 2 OS=Mycobacterium leprae
(strain TN) GN=kasB PE=3 SV=2
Length = 420
Score = 100 bits (249), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 91/295 (30%), Positives = 131/295 (44%), Gaps = 43/295 (14%)
Query: 24 VVVTGLGAVTPLGDDAHLFYTKLLEGVSGISQIEGFDCSE--LPTRIAGEIKTLSTDGLV 81
VVVTG+ T L DA + LL+ SGI ++ E LP RI G + D +
Sbjct: 16 VVVTGIAMTTALATDAETTWKLLLDNQSGIRMLDDPFIEEFNLPVRIGGHLLE-EFDHQL 74
Query: 82 PPKHAKRADNYLIYALIAGKKALADAGITEQVSGELNKNRCGVLIGTAMGSMRALKDGID 141
+R + + ++ +AG S E++ NR V IGT +GS L D
Sbjct: 75 TRVELRRMGYLQRMSTVLSRRLWENAG-----SPEVDTNRLMVSIGTGLGSAEELVFSYD 129
Query: 142 AIK---------ISYKK--------------------MT----CATGNCCILTAANHIIE 168
++ ++ +K MT CA+G+ I A I+
Sbjct: 130 DMRARGMKAVSPLAVQKYMPNGAAAAVGLEHHAKAGVMTPVSACASGSEAIAHAWQQIVL 189
Query: 169 GDADMMLCGGSDGVIIPECIAGFIACN-NLSRRNSDPTKASRPWDSDHDGFVMGEGAGVM 227
G+AD +CGG + I IAGF +S +N +P A RP+D D DGFV GE +M
Sbjct: 190 GEADSAICGGVETKIEAVPIAGFSQMRIVMSTKNDNPAGACRPFDRDRDGFVFGEAGALM 249
Query: 228 LLEELDHAKRRRANIYAEFKGGSSTY-AYHISEPRLNALGAMACMEKALTNSGVS 281
L+E D AK R ANI A G S T +H+ P N A + +A+ +G+S
Sbjct: 250 LIETEDSAKARSANILARIMGASITSDGFHMVAPDPNGERAGHAIARAVHLAGLS 304
>sp|P04683|NODE_RHILV Nodulation protein E OS=Rhizobium leguminosarum bv. viciae GN=nodE
PE=3 SV=2
Length = 403
Score = 100 bits (248), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 91/305 (29%), Positives = 136/305 (44%), Gaps = 60/305 (19%)
Query: 20 VKRRVVVTGLGAVTPLGDDAHLFYTKLLEGVSGISQIEGFDCSELPTRIAGEIKTLSTDG 79
+ RRVV+TGLG + LG DA +T++ EG S I I + EL I EIK L
Sbjct: 1 MDRRVVITGLGGLCGLGTDASSIWTEMREGRSAIGPISNSEIHELKGMIGTEIKVLPQHD 60
Query: 80 LVPPKHAKRADNYLIYALIAGKKALADAGITEQVSGELNKNRCGVLIGTAMGSMRALKDG 139
+ K D + + A++A K+A+ AG++ E N +R G +G G G
Sbjct: 61 -IDRKQLISMDRFSLLAVLAAKQAMLQAGLS---CNEGNAHRFGATVGVGFG-------G 109
Query: 140 IDAIKISYKKM----------------------------------------TCATGNCCI 159
DA + +Y+ + CA+ N I
Sbjct: 110 WDATEKAYRTLLLGGATRTELFTGVKAMPSAAACQVSMNLGLRGPVFGATSACASANHAI 169
Query: 160 LTAANHIIEGDADMMLCGGSDGVIIPECIAGFIACNNLSRRNSDPTKASRPWDSDHDGFV 219
+A + I G AD+ML GGSD ++ + + A L+ RP+ +D G V
Sbjct: 170 ASAVDQIKLGRADVMLAGGSDAPLVWIVLKAWEAMRVLA------PDTCRPFSADRKGLV 223
Query: 220 MGEGAGVMLLEELDHAKRRRANIYAEFKG-GSSTYAYHISEPRLNALGAMACMEKALTNS 278
+GEGAG+ +LE +HA R A + AE G G S AYHI+ P ++ G A M L ++
Sbjct: 224 LGEGAGMAVLESYEHAAARGATMLAEVAGIGLSADAYHIAAPAVH--GPEAAMRACLVDA 281
Query: 279 GVSGE 283
++ E
Sbjct: 282 SLNAE 286
>sp|P72331|NODE_RHIS3 Nodulation protein E OS=Rhizobium sp. (strain N33) GN=nodE PE=3
SV=1
Length = 402
Score = 98.2 bits (243), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 88/303 (29%), Positives = 134/303 (44%), Gaps = 60/303 (19%)
Query: 20 VKRRVVVTGLGAVTPLGDDAHLFYTKLLEGVSGISQIEGFDCSELPTRIAGEIKTLSTDG 79
+ RRVV+TG+G + LG DA + ++ EG S I I + L I EIKTL
Sbjct: 1 MDRRVVITGIGGLCGLGTDAPSIWKEMREGRSAIGPIVTSELHGLTGTIGAEIKTLPEHD 60
Query: 80 LVPPKHAKRADNYLIYALIAGKKALADAGITEQVSGELNKNRCGVLIGTAMGSMRALKDG 139
+ K D + + A++A ++A+ AG++ E N R G ++G GS G
Sbjct: 61 -IDRKQLVTMDRFSLLAVLAAREAMRQAGLS---CDERNAYRFGAIVGVG-GS------G 109
Query: 140 IDAIKISYKKM----------------------------------------TCATGNCCI 159
+AI+ SY+ + CA+ N I
Sbjct: 110 WEAIEASYRALLLNGARRAGVMDVPKAMPSAAAGQVSMSLGLRGPVFGVTSACASANHAI 169
Query: 160 LTAANHIIEGDADMMLCGGSDGVIIPECIAGFIACNNLSRRNSDPTKASRPWDSDHDGFV 219
+A + I G AD+ML GGSD + + + A ++ RP+ SD G V
Sbjct: 170 ASAVDQIRCGRADVMLAGGSDAPFVFCVVKAWEAMRVIA------PDTCRPFSSDRRGLV 223
Query: 220 MGEGAGVMLLEELDHAKRRRANIYAEFKG-GSSTYAYHISEPRLNALGAMACMEKALTNS 278
+GEGAG+ +LE +HA R A I AE G G S A+++ P + G A M L ++
Sbjct: 224 LGEGAGMAVLESYEHATARGATIIAEIAGIGLSADAFNLVSPAVE--GPEAAMRACLADA 281
Query: 279 GVS 281
G++
Sbjct: 282 GLN 284
>sp|Q9CBS7|FAB1_MYCLE 3-oxoacyl-[acyl-carrier-protein] synthase 1 OS=Mycobacterium leprae
(strain TN) GN=kasA PE=3 SV=1
Length = 416
Score = 96.3 bits (238), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 81/277 (29%), Positives = 122/277 (44%), Gaps = 42/277 (15%)
Query: 43 YTKLLEGVSGISQIEG--FDCSELPTRIAGEIKTLSTDGLVPPKHAKRADNYLIYALIAG 100
+ LL G SGI +E +LP +I G +K D H R D + +
Sbjct: 33 WKGLLAGESGIHVLEDEYITKWDLPVKIGGHLKE-PVD-----SHMSRLDLRRMSYVQRM 86
Query: 101 KKALADAGITEQVSGELNKNRCGVLIGTAMGSMRALKDGIDAIKISYKK----------- 149
K L+ S E++ +R V++GT +G + + D + +
Sbjct: 87 SKLLSGRLWESTGSPEVDPDRFTVVVGTGLGGAERIVESYDLMNAGGPRKVSPLAVQMIM 146
Query: 150 ------------------MT----CATGNCCILTAANHIIEGDADMMLCGGSDGVIIPEC 187
MT C++G+ I A II GDAD+ +CGG +G I
Sbjct: 147 PNGAAATVGLQLGACAGVMTPVSACSSGSEAIAHAWRQIIMGDADVAVCGGVEGPIEALP 206
Query: 188 IAGFIACNNLSRRNSDPTKASRPWDSDHDGFVMGEGAGVMLLEELDHAKRRRANIYAEFK 247
IA F +S RN DP ASRP+D + DGFV GE +ML+E +HAK R A A
Sbjct: 207 IAAFSMMRAMSTRNDDPEGASRPFDKNRDGFVFGEAGALMLIETEEHAKARGAKPLARLL 266
Query: 248 G-GSSTYAYHISEPRLNALGAMACMEKALTNSGVSGE 283
G G ++ A+H+ P + + A M ++L +G+S +
Sbjct: 267 GAGITSDAFHMVAPAADGVRAGRAMTRSLELAGLSAK 303
>sp|P04684|NODE_RHILT Nodulation protein E OS=Rhizobium leguminosarum bv. trifolii
GN=nodE PE=3 SV=2
Length = 401
Score = 95.9 bits (237), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 90/293 (30%), Positives = 133/293 (45%), Gaps = 46/293 (15%)
Query: 20 VKRRVVVTGLGAVTPLGDDAHLFYTKLLEGVSGISQIEGFDCSELPTRIAGEIKTLSTDG 79
+ RRVV+TG+G + LG +A + ++ EG S IS I D +L + EIK +
Sbjct: 1 MDRRVVITGIGGLCGLGTNAASIWKEMREGPSAISPIITTDLYDLEGTVGLEIKAIPEHD 60
Query: 80 LVPPKHAKRADNYLIYALIAGKKALADAGITEQVSGELNKNRCGVLIG-------TAMGS 132
+P K D + + A+IA +A+ AG++ E N +R G +G T +
Sbjct: 61 -IPRKQLVSMDRFSLLAVIAATEAMKQAGLS---CDEQNAHRFGAAMGLGGPGWDTIEET 116
Query: 133 MRA-LKDGIDAIKI--SYKKM-----------------------TCATGNCCILTAANHI 166
R+ L DG+ +I + K M CA GN I +A + I
Sbjct: 117 YRSILLDGVTRARIFTAPKGMPSAAAGHVSIFLGLRGPVFGVTSACAAGNHAIASAVDQI 176
Query: 167 IEGDADMMLCGGSDGVIIPECIAGFIACNNLSRRNSDPTKASRPWDSDHDGFVMGEGAGV 226
G AD+ML GGSD + + + A L+ RP+ +D G V+GEGAG+
Sbjct: 177 RLGRADVMLAGGSDAPLTWGVLKSWEALRVLA------PDTCRPFSADRKGVVLGEGAGM 230
Query: 227 MLLEELDHAKRRRANIYAEFKG-GSSTYAYHISEPRLNALGAMACMEKALTNS 278
+LE +HA R A + AE G G S AY I P + G A M L ++
Sbjct: 231 AVLESYEHAAARGATMLAEVAGIGLSGDAYDIVMPSIE--GPEAAMRSCLADA 281
>sp|P63454|FAB1_MYCTU 3-oxoacyl-[acyl-carrier-protein] synthase 1 OS=Mycobacterium
tuberculosis GN=kasA PE=1 SV=1
Length = 416
Score = 95.5 bits (236), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 52/131 (39%), Positives = 76/131 (58%), Gaps = 1/131 (0%)
Query: 152 CATGNCCILTAANHIIEGDADMMLCGGSDGVIIPECIAGFIACNNLSRRNSDPTKASRPW 211
C++G+ I A I+ GDAD+ +CGG +G I IA F +S RN +P +ASRP+
Sbjct: 171 CSSGSEAIAHAWRQIVMGDADVAVCGGVEGPIEALPIAAFSMMRAMSTRNDEPERASRPF 230
Query: 212 DSDHDGFVMGEGAGVMLLEELDHAKRRRANIYAEFKG-GSSTYAYHISEPRLNALGAMAC 270
D D DGFV GE +ML+E +HAK R A A G G ++ A+H+ P + + A
Sbjct: 231 DKDRDGFVFGEAGALMLIETEEHAKARGAKPLARLLGAGITSDAFHMVAPAADGVRAGRA 290
Query: 271 MEKALTNSGVS 281
M ++L +G+S
Sbjct: 291 MTRSLELAGLS 301
>sp|P63455|FAB1_MYCBO 3-oxoacyl-[acyl-carrier-protein] synthase 1 OS=Mycobacterium bovis
(strain ATCC BAA-935 / AF2122/97) GN=kasA PE=3 SV=1
Length = 416
Score = 95.5 bits (236), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 52/131 (39%), Positives = 76/131 (58%), Gaps = 1/131 (0%)
Query: 152 CATGNCCILTAANHIIEGDADMMLCGGSDGVIIPECIAGFIACNNLSRRNSDPTKASRPW 211
C++G+ I A I+ GDAD+ +CGG +G I IA F +S RN +P +ASRP+
Sbjct: 171 CSSGSEAIAHAWRQIVMGDADVAVCGGVEGPIEALPIAAFSMMRAMSTRNDEPERASRPF 230
Query: 212 DSDHDGFVMGEGAGVMLLEELDHAKRRRANIYAEFKG-GSSTYAYHISEPRLNALGAMAC 270
D D DGFV GE +ML+E +HAK R A A G G ++ A+H+ P + + A
Sbjct: 231 DKDRDGFVFGEAGALMLIETEEHAKARGAKPLARLLGAGITSDAFHMVAPAADGVRAGRA 290
Query: 271 MEKALTNSGVS 281
M ++L +G+S
Sbjct: 291 MTRSLELAGLS 301
>sp|P06230|NODE_RHIME Nodulation protein E OS=Rhizobium meliloti (strain 1021) GN=nodE
PE=3 SV=1
Length = 402
Score = 93.2 bits (230), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 83/305 (27%), Positives = 131/305 (42%), Gaps = 60/305 (19%)
Query: 20 VKRRVVVTGLGAVTPLGDDAHLFYTKLLEGVSGISQIEGFDCSELPTRIAGEIKTLSTDG 79
+ RRVV+TG+G + LG D + + EG S I + + L + E+K L D
Sbjct: 1 MDRRVVITGMGGLCGLGTDTTSIWKWMREGRSAIGPLLNTELHGLKGIVGAEVKALP-DH 59
Query: 80 LVPPKHAKRADNYLIYALIAGKKALADAGITEQVSGELNKNRCGVLIGTAMGSMRALKDG 139
+ K D + A+IA +A+ AG++ E N R G +G +G G
Sbjct: 60 NIDRKQLVSMDRISVLAVIAAHEAMRQAGLS---CNEGNALRFGATVGVGLG-------G 109
Query: 140 IDAIKISYKKM----------------------------------------TCATGNCCI 159
DA + +Y+ + C++ N I
Sbjct: 110 WDATEKAYRTLLVDGGTRTEIFTGVKAMPSAAACQVSMSLGLRGPVFGVTSACSSANHAI 169
Query: 160 LTAANHIIEGDADMMLCGGSDGVIIPECIAGFIACNNLSRRNSDPTKASRPWDSDHDGFV 219
+A + I G AD+ML GGSD ++ + + A L+ RP+ + G V
Sbjct: 170 ASAVDQIKCGRADVMLAGGSDAPLVWIVLKAWEAMRALA------PDTCRPFSAGRKGVV 223
Query: 220 MGEGAGVMLLEELDHAKRRRANIYAEFKG-GSSTYAYHISEPRLNALGAMACMEKALTNS 278
+GEGAG+ +LE +HA R A I AE G G S A+HI+ P ++ G + M L ++
Sbjct: 224 LGEGAGMAVLESYEHATARGATILAEVAGVGLSADAFHITAPAVH--GPESAMRACLADA 281
Query: 279 GVSGE 283
G++ E
Sbjct: 282 GLNAE 286
>sp|P57193|FABB_BUCAI 3-oxoacyl-[acyl-carrier-protein] synthase 1 OS=Buchnera aphidicola
subsp. Acyrthosiphon pisum (strain APS) GN=fabB PE=3
SV=1
Length = 406
Score = 91.3 bits (225), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 80/268 (29%), Positives = 125/268 (46%), Gaps = 42/268 (15%)
Query: 22 RRVVVTGLGAVTPLGDDAHLFYTKLLEGVSGISQIEGFDCSELPTRIAGEIKTLSTDGLV 81
RRVV+TG+G V+ +G++ L +GVSGI E + + + G IK L + ++
Sbjct: 2 RRVVITGIGIVSSIGNNKKEVLASLYKGVSGIVSSEEMKKLGMRSAVWGNIK-LESINII 60
Query: 82 PPKHAKRADNYLIYALIAGKKALADAGITEQVSGELNKN-RCGVLIGTAMG--------- 131
K ++ +N Y+ +A +A+ DA I + KN R G++ G+
Sbjct: 61 TQKLSRFMNNASRYSFVAMMEAIKDAKIDREY---YQKNPRVGLISGSGCSFSKNTLTSD 117
Query: 132 -----------------SMRALKDGIDAIKISYKKM---------TCATGNCCILTAANH 165
+++ + GI A + K+ CAT CI A
Sbjct: 118 IHLMKNKHISKGISPYLAVKTMPSGISACLSTLFKIYGVTYSISSACATSAHCIGNAFEL 177
Query: 166 IIEGDADMMLCGGSDGVIIPECIAGFIACNNLSR-RNSDPTKASRPWDSDHDGFVMGEGA 224
I G D++ GG + + + E F A LS N+DP KASR +D DGFV+ GA
Sbjct: 178 IQFGRQDLIFAGGGEEISL-ELAMQFDAMRALSTCFNNDPKKASRVYDVYRDGFVISGGA 236
Query: 225 GVMLLEELDHAKRRRANIYAEFKGGSST 252
G++++EEL+ A R A IYAE G ++T
Sbjct: 237 GMLVIEELNSALSRSAYIYAEIIGYAAT 264
>sp|P06231|NOE4_RHIML Nodulation protein E OS=Rhizobium meliloti GN=nodE PE=3 SV=1
Length = 401
Score = 87.4 bits (215), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 83/297 (27%), Positives = 126/297 (42%), Gaps = 45/297 (15%)
Query: 20 VKRRVVVTGLGAVTPLGDDAHLFYTKLLEGVSGISQIEGFDCSELPTRIAGEIKTLSTDG 79
+ RRVV+TG+G + LG D + S I + + L + EIK L D
Sbjct: 1 MDRRVVITGMGGLCGLGTDTTSIWKWSARRRSAIGPVLNTELHGLKGIVGAEIKALP-DH 59
Query: 80 LVPPKHAKRADNYLIYALIAGKKALADAGITEQVSGELNKNRCGVLIGTAMGSMRALKD- 138
+ K D + A+IA +A+ AG++ E N R G +G +G A +
Sbjct: 60 NIDRKQLVSMDRISVLAVIAAHEAMRQAGLS---CNEGNALRFGATVGVGLGGWDATEKA 116
Query: 139 --------GIDAIKISYKKM-----------------------TCATGNCCILTAANHII 167
G I K M C++ N I +A + I
Sbjct: 117 YRPSLSTGGRTEIFTGVKAMPSAAACQVSMSLGLRGPVFGVTSACSSANHAIASAVDQIK 176
Query: 168 EGDADMMLCGGSDGVIIPECIAGFIACNNLSRRNSDPTKASRPWDSDHDGFVMGEGAGVM 227
G AD+ML GGSD ++ + + A L+ RP+ + G V+GEGAG+
Sbjct: 177 CGRADVMLAGGSDAPLVWIVLKAWEAMRALA------PDTCRPFSAGRKGVVLGEGAGMA 230
Query: 228 LLEELDHAKRRRANIYAEFKG-GSSTYAYHISEPRLNALGAMACMEKALTNSGVSGE 283
+LE +HA R A I AE G G S A+HI+ P ++ G + M L ++G++ E
Sbjct: 231 VLESYEHATARGATILAEVAGVGLSADAFHITAPAVH--GPESAMRACLADAGLNAE 285
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.317 0.134 0.393
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 107,558,171
Number of Sequences: 539616
Number of extensions: 4591845
Number of successful extensions: 10988
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 130
Number of HSP's successfully gapped in prelim test: 35
Number of HSP's that attempted gapping in prelim test: 10652
Number of HSP's gapped (non-prelim): 256
length of query: 287
length of database: 191,569,459
effective HSP length: 116
effective length of query: 171
effective length of database: 128,974,003
effective search space: 22054554513
effective search space used: 22054554513
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 60 (27.7 bits)