BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 041764
(175 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|4I8V|A Chain A, Human Cytochrome P450 1a1 In Complex With
Alpha-naphthoflavone
pdb|4I8V|B Chain B, Human Cytochrome P450 1a1 In Complex With
Alpha-naphthoflavone
pdb|4I8V|C Chain C, Human Cytochrome P450 1a1 In Complex With
Alpha-naphthoflavone
pdb|4I8V|D Chain D, Human Cytochrome P450 1a1 In Complex With
Alpha-naphthoflavone
Length = 491
Score = 62.4 bits (150), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 29/85 (34%), Positives = 48/85 (56%), Gaps = 1/85 (1%)
Query: 25 LQEKTRVLAKRLPPGPWKLPVLGNLHQLNGDSPHVSLQHLSNDYGPLMFLQLGSVPTLVI 84
+ +KT + PPGPW P++G++ L G +PH++L +S YG ++ +++GS P +V+
Sbjct: 1 MAKKTSSKGLKNPPGPWGWPLIGHMLTL-GKNPHLALSRMSQQYGDVLQIRIGSTPVVVL 59
Query: 85 SSADVAREIFRTHDLIFSGRPRSYA 109
S D R+ F GRP Y
Sbjct: 60 SGLDTIRQALVRQGDDFKGRPDLYT 84
>pdb|2HI4|A Chain A, Crystal Structure Of Human Microsomal P450 1a2 In Complex
With Alpha-Naphthoflavone
Length = 495
Score = 57.8 bits (138), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 28/74 (37%), Positives = 43/74 (58%), Gaps = 1/74 (1%)
Query: 37 PPGPWKLPVLGNLHQLNGDSPHVSLQHLSNDYGPLMFLQLGSVPTLVISSADVAREIFRT 96
PP PW P+LG++ L G +PH++L +S YG ++ +++GS P LV+S D R+
Sbjct: 18 PPEPWGWPLLGHVLTL-GKNPHLALSRMSQRYGDVLQIRIGSTPVLVLSRLDTIRQALVR 76
Query: 97 HDLIFSGRPRSYAA 110
F GRP Y +
Sbjct: 77 QGDDFKGRPDLYTS 90
>pdb|2Q6N|A Chain A, Structure Of Cytochrome P450 2b4 With Bound 1-(4-
Cholorophenyl)imidazole
pdb|2Q6N|B Chain B, Structure Of Cytochrome P450 2b4 With Bound 1-(4-
Cholorophenyl)imidazole
pdb|2Q6N|C Chain C, Structure Of Cytochrome P450 2b4 With Bound 1-(4-
Cholorophenyl)imidazole
pdb|2Q6N|D Chain D, Structure Of Cytochrome P450 2b4 With Bound 1-(4-
Cholorophenyl)imidazole
pdb|2Q6N|E Chain E, Structure Of Cytochrome P450 2b4 With Bound 1-(4-
Cholorophenyl)imidazole
pdb|2Q6N|F Chain F, Structure Of Cytochrome P450 2b4 With Bound 1-(4-
Cholorophenyl)imidazole
pdb|2Q6N|G Chain G, Structure Of Cytochrome P450 2b4 With Bound 1-(4-
Cholorophenyl)imidazole
Length = 478
Score = 57.4 bits (137), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 44/165 (26%), Positives = 75/165 (45%), Gaps = 31/165 (18%)
Query: 35 RLPPGPWKLPVLGNLHQLNGDSPHVSLQHLSNDYGPLMFLQLGSVPTLVISSADVARE-- 92
+LPPGP LPVLGNL Q++ S L YG + + LGS P +V+ D RE
Sbjct: 10 KLPPGPSPLPVLGNLLQMDRKGLLRSFLRLREKYGDVFTVYLGSRPVVVLCGTDAIREAL 69
Query: 93 ------------------IFRTHDLIFSGRPRSYAAKK----AVRKIVIMEILSSKRVQS 130
IF+ + +IF+ R A ++ +R + + +R+Q
Sbjct: 70 VDQAEAFSGRGKIAVVDPIFQGYGVIFANGERWRALRRFSLATMRDFGMGKRSVEERIQ- 128
Query: 131 FQAVRYEEVMLVLQFIAQSSTKPIDLSRLTLLLSNNIVCRVAFGQ 175
EE +++ + +S +D + L +++NI+C + FG+
Sbjct: 129 ------EEARCLVEELRKSKGALLDNTLLFHSITSNIICSIVFGK 167
>pdb|4H1N|A Chain A, Crystal Structure Of P450 2b4 F297a Mutant In Complex With
Anti- Platelet Drug Clopidogrel
Length = 479
Score = 57.4 bits (137), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 44/165 (26%), Positives = 75/165 (45%), Gaps = 31/165 (18%)
Query: 35 RLPPGPWKLPVLGNLHQLNGDSPHVSLQHLSNDYGPLMFLQLGSVPTLVISSADVARE-- 92
+LPPGP LPVLGNL Q++ S L YG + + LGS P +V+ D RE
Sbjct: 10 KLPPGPSPLPVLGNLLQMDRKGLLRSFLRLREKYGDVFTVYLGSRPVVVLCGTDAIREAL 69
Query: 93 ------------------IFRTHDLIFSGRPRSYAAKK----AVRKIVIMEILSSKRVQS 130
IF+ + +IF+ R A ++ +R + + +R+Q
Sbjct: 70 VDQAEAFSGRGKIAVVDPIFQGYGVIFANGERWRALRRFSLATMRDFGMGKRSVEERIQ- 128
Query: 131 FQAVRYEEVMLVLQFIAQSSTKPIDLSRLTLLLSNNIVCRVAFGQ 175
EE +++ + +S +D + L +++NI+C + FG+
Sbjct: 129 ------EEARCLVEELRKSKGALLDNTLLFHSITSNIICSIVFGK 167
>pdb|3TK3|A Chain A, Cytochrome P450 2b4 Mutant L437a In Complex With
4-(4-Chlorophenyl) Imidazole
pdb|3TK3|B Chain B, Cytochrome P450 2b4 Mutant L437a In Complex With
4-(4-Chlorophenyl) Imidazole
pdb|3TK3|C Chain C, Cytochrome P450 2b4 Mutant L437a In Complex With
4-(4-Chlorophenyl) Imidazole
pdb|3TK3|D Chain D, Cytochrome P450 2b4 Mutant L437a In Complex With
4-(4-Chlorophenyl) Imidazole
Length = 476
Score = 57.4 bits (137), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 44/165 (26%), Positives = 75/165 (45%), Gaps = 31/165 (18%)
Query: 35 RLPPGPWKLPVLGNLHQLNGDSPHVSLQHLSNDYGPLMFLQLGSVPTLVISSADVARE-- 92
+LPPGP LPVLGNL Q++ S L YG + + LGS P +V+ D RE
Sbjct: 10 KLPPGPSPLPVLGNLLQMDRKGLLRSFLRLREKYGDVFTVYLGSRPVVVLCGTDAIREAL 69
Query: 93 ------------------IFRTHDLIFSGRPRSYAAKK----AVRKIVIMEILSSKRVQS 130
IF+ + +IF+ R A ++ +R + + +R+Q
Sbjct: 70 VDQAEAFSGRGKIAVVDPIFQGYGVIFANGERWRALRRFSLATMRDFGMGKRSVEERIQ- 128
Query: 131 FQAVRYEEVMLVLQFIAQSSTKPIDLSRLTLLLSNNIVCRVAFGQ 175
EE +++ + +S +D + L +++NI+C + FG+
Sbjct: 129 ------EEARCLVEELRKSKGALLDNTLLFHSITSNIICSIVFGK 167
>pdb|1SUO|A Chain A, Structure Of Mammalian Cytochrome P450 2b4 With Bound
4-(4- Chlorophenyl)imidazole
pdb|2BDM|A Chain A, Structure Of Cytochrome P450 2b4 With Bound Bifonazole
pdb|3G5N|A Chain A, Triple Ligand Occupancy Crystal Structure Of Cytochrome
P450 Complex With The Inhibitor
1-Biphenyl-4-Methyl-1h-Imidazole
pdb|3G5N|B Chain B, Triple Ligand Occupancy Crystal Structure Of Cytochrome
P450 Complex With The Inhibitor
1-Biphenyl-4-Methyl-1h-Imidazole
pdb|3G5N|C Chain C, Triple Ligand Occupancy Crystal Structure Of Cytochrome
P450 Complex With The Inhibitor
1-Biphenyl-4-Methyl-1h-Imidazole
pdb|3G5N|D Chain D, Triple Ligand Occupancy Crystal Structure Of Cytochrome
P450 Complex With The Inhibitor
1-Biphenyl-4-Methyl-1h-Imidazole
pdb|3G93|A Chain A, Single Ligand Occupancy Crystal Structure Of Cytochrome
P450 Complex With The Inhibitor
1-Biphenyl-4-Methyl-1h-Imidazole
pdb|3G93|B Chain B, Single Ligand Occupancy Crystal Structure Of Cytochrome
P450 Complex With The Inhibitor
1-Biphenyl-4-Methyl-1h-Imidazole
pdb|3G93|C Chain C, Single Ligand Occupancy Crystal Structure Of Cytochrome
P450 Complex With The Inhibitor
1-Biphenyl-4-Methyl-1h-Imidazole
pdb|3G93|D Chain D, Single Ligand Occupancy Crystal Structure Of Cytochrome
P450 Complex With The Inhibitor
1-Biphenyl-4-Methyl-1h-Imidazole
pdb|3KW4|A Chain A, Crystal Structure Of Cytochrome 2b4 In Complex With The
Anti-Platelet Drug Ticlopidine
pdb|3ME6|A Chain A, Crystal Structure Of Cytochrome 2b4 In Complex With The
Anti-Platelet Drug Clopidogrel
pdb|3ME6|B Chain B, Crystal Structure Of Cytochrome 2b4 In Complex With The
Anti-Platelet Drug Clopidogrel
pdb|3ME6|C Chain C, Crystal Structure Of Cytochrome 2b4 In Complex With The
Anti-Platelet Drug Clopidogrel
pdb|3ME6|D Chain D, Crystal Structure Of Cytochrome 2b4 In Complex With The
Anti-Platelet Drug Clopidogrel
pdb|3MVR|A Chain A, Crystal Structure Of Cytochrome P450 2b4-H226y In A Closed
Conformation
pdb|3MVR|B Chain B, Crystal Structure Of Cytochrome P450 2b4-H226y In A Closed
Conformation
pdb|3R1A|A Chain A, Closed Crystal Structure Of Cytochrome P450 2b4 Covalently
Bound To The Mechanism-Based Inactivator
Tert-Butylphenylacetylene
pdb|3R1A|B Chain B, Closed Crystal Structure Of Cytochrome P450 2b4 Covalently
Bound To The Mechanism-Based Inactivator
Tert-Butylphenylacetylene
pdb|3R1A|C Chain C, Closed Crystal Structure Of Cytochrome P450 2b4 Covalently
Bound To The Mechanism-Based Inactivator
Tert-Butylphenylacetylene
pdb|3R1A|D Chain D, Closed Crystal Structure Of Cytochrome P450 2b4 Covalently
Bound To The Mechanism-Based Inactivator
Tert-Butylphenylacetylene
pdb|3R1A|E Chain E, Closed Crystal Structure Of Cytochrome P450 2b4 Covalently
Bound To The Mechanism-Based Inactivator
Tert-Butylphenylacetylene
pdb|3R1A|F Chain F, Closed Crystal Structure Of Cytochrome P450 2b4 Covalently
Bound To The Mechanism-Based Inactivator
Tert-Butylphenylacetylene
pdb|3R1A|G Chain G, Closed Crystal Structure Of Cytochrome P450 2b4 Covalently
Bound To The Mechanism-Based Inactivator
Tert-Butylphenylacetylene
pdb|3R1A|H Chain H, Closed Crystal Structure Of Cytochrome P450 2b4 Covalently
Bound To The Mechanism-Based Inactivator
Tert-Butylphenylacetylene
pdb|3R1B|A Chain A, Open Crystal Structure Of Cytochrome P450 2b4 Covalently
Bound To The Mechanism-Based Inactivator
Tert-Butylphenylacetylene
pdb|3R1B|B Chain B, Open Crystal Structure Of Cytochrome P450 2b4 Covalently
Bound To The Mechanism-Based Inactivator
Tert-Butylphenylacetylene
pdb|3R1B|C Chain C, Open Crystal Structure Of Cytochrome P450 2b4 Covalently
Bound To The Mechanism-Based Inactivator
Tert-Butylphenylacetylene
pdb|3R1B|D Chain D, Open Crystal Structure Of Cytochrome P450 2b4 Covalently
Bound To The Mechanism-Based Inactivator
Tert-Butylphenylacetylene
pdb|3TMZ|A Chain A, Crystal Structure Of P450 2b4(H226y) In Complex With
Amlodipine
pdb|3UAS|A Chain A, Cytochrome P450 2b4 Covalently Bound To The
Mechanism-based Inactivator 9-ethynylphenanthrene
Length = 476
Score = 57.4 bits (137), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 44/165 (26%), Positives = 75/165 (45%), Gaps = 31/165 (18%)
Query: 35 RLPPGPWKLPVLGNLHQLNGDSPHVSLQHLSNDYGPLMFLQLGSVPTLVISSADVARE-- 92
+LPPGP LPVLGNL Q++ S L YG + + LGS P +V+ D RE
Sbjct: 10 KLPPGPSPLPVLGNLLQMDRKGLLRSFLRLREKYGDVFTVYLGSRPVVVLCGTDAIREAL 69
Query: 93 ------------------IFRTHDLIFSGRPRSYAAKK----AVRKIVIMEILSSKRVQS 130
IF+ + +IF+ R A ++ +R + + +R+Q
Sbjct: 70 VDQAEAFSGRGKIAVVDPIFQGYGVIFANGERWRALRRFSLATMRDFGMGKRSVEERIQ- 128
Query: 131 FQAVRYEEVMLVLQFIAQSSTKPIDLSRLTLLLSNNIVCRVAFGQ 175
EE +++ + +S +D + L +++NI+C + FG+
Sbjct: 129 ------EEARCLVEELRKSKGALLDNTLLFHSITSNIICSIVFGK 167
>pdb|1PO5|A Chain A, Structure Of Mammalian Cytochrome P450 2b4
Length = 476
Score = 57.0 bits (136), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 44/165 (26%), Positives = 75/165 (45%), Gaps = 31/165 (18%)
Query: 35 RLPPGPWKLPVLGNLHQLNGDSPHVSLQHLSNDYGPLMFLQLGSVPTLVISSADVARE-- 92
+LPPGP LPVLGNL Q++ S L YG + + LGS P +V+ D RE
Sbjct: 10 KLPPGPSPLPVLGNLLQMDRKGLLRSFLRLREKYGDVFTVYLGSRPVVVLCGTDAIREAL 69
Query: 93 ------------------IFRTHDLIFSGRPRSYAAKK----AVRKIVIMEILSSKRVQS 130
IF+ + +IF+ R A ++ +R + + +R+Q
Sbjct: 70 VDQAEAFSGRGKIAVVDPIFQGYGVIFANGERWRALRRFSLATMRDFGMGKRSVEERIQ- 128
Query: 131 FQAVRYEEVMLVLQFIAQSSTKPIDLSRLTLLLSNNIVCRVAFGQ 175
EE +++ + +S +D + L +++NI+C + FG+
Sbjct: 129 ------EEARCLVEELRKSKGALLDNTLLFHSITSNIICSIVFGK 167
>pdb|2PG5|A Chain A, Crystal Structure Of Human Microsomal P450 2a6 N297q
pdb|2PG5|B Chain B, Crystal Structure Of Human Microsomal P450 2a6 N297q
pdb|2PG5|C Chain C, Crystal Structure Of Human Microsomal P450 2a6 N297q
pdb|2PG5|D Chain D, Crystal Structure Of Human Microsomal P450 2a6 N297q
Length = 476
Score = 54.3 bits (129), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 28/70 (40%), Positives = 37/70 (52%)
Query: 35 RLPPGPWKLPVLGNLHQLNGDSPHVSLQHLSNDYGPLMFLQLGSVPTLVISSADVAREIF 94
+LPPGP LP +GN QLN + + SL +S YGP+ + LG +V+ D RE
Sbjct: 10 KLPPGPTPLPFIGNYLQLNTEQMYNSLMKISERYGPVFTIHLGPRRVVVLCGHDAVREAL 69
Query: 95 RTHDLIFSGR 104
FSGR
Sbjct: 70 VDQAEEFSGR 79
>pdb|2PG7|A Chain A, Crystal Structure Of Human Microsomal P450 2a6 N297qI300V
pdb|2PG7|B Chain B, Crystal Structure Of Human Microsomal P450 2a6 N297qI300V
pdb|2PG7|C Chain C, Crystal Structure Of Human Microsomal P450 2a6 N297qI300V
pdb|2PG7|D Chain D, Crystal Structure Of Human Microsomal P450 2a6 N297qI300V
Length = 476
Score = 54.3 bits (129), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 28/70 (40%), Positives = 37/70 (52%)
Query: 35 RLPPGPWKLPVLGNLHQLNGDSPHVSLQHLSNDYGPLMFLQLGSVPTLVISSADVAREIF 94
+LPPGP LP +GN QLN + + SL +S YGP+ + LG +V+ D RE
Sbjct: 10 KLPPGPTPLPFIGNYLQLNTEQMYNSLMKISERYGPVFTIHLGPRRVVVLCGHDAVREAL 69
Query: 95 RTHDLIFSGR 104
FSGR
Sbjct: 70 VDQAEEFSGR 79
>pdb|2PG6|A Chain A, Crystal Structure Of Human Microsomal P450 2a6 L240cN297Q
pdb|2PG6|B Chain B, Crystal Structure Of Human Microsomal P450 2a6 L240cN297Q
pdb|2PG6|C Chain C, Crystal Structure Of Human Microsomal P450 2a6 L240cN297Q
pdb|2PG6|D Chain D, Crystal Structure Of Human Microsomal P450 2a6 L240cN297Q
Length = 476
Score = 54.3 bits (129), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 28/70 (40%), Positives = 37/70 (52%)
Query: 35 RLPPGPWKLPVLGNLHQLNGDSPHVSLQHLSNDYGPLMFLQLGSVPTLVISSADVAREIF 94
+LPPGP LP +GN QLN + + SL +S YGP+ + LG +V+ D RE
Sbjct: 10 KLPPGPTPLPFIGNYLQLNTEQMYNSLMKISERYGPVFTIHLGPRRVVVLCGHDAVREAL 69
Query: 95 RTHDLIFSGR 104
FSGR
Sbjct: 70 VDQAEEFSGR 79
>pdb|1Z10|A Chain A, Crystal Structure Of Human Microsomal P450 2a6 With
Coumarin Bound
pdb|1Z10|B Chain B, Crystal Structure Of Human Microsomal P450 2a6 With
Coumarin Bound
pdb|1Z10|C Chain C, Crystal Structure Of Human Microsomal P450 2a6 With
Coumarin Bound
pdb|1Z10|D Chain D, Crystal Structure Of Human Microsomal P450 2a6 With
Coumarin Bound
pdb|1Z11|A Chain A, Crystal Structure Of Human Microsomal P450 2a6 With
Methoxsalen Bound
pdb|1Z11|B Chain B, Crystal Structure Of Human Microsomal P450 2a6 With
Methoxsalen Bound
pdb|1Z11|C Chain C, Crystal Structure Of Human Microsomal P450 2a6 With
Methoxsalen Bound
pdb|1Z11|D Chain D, Crystal Structure Of Human Microsomal P450 2a6 With
Methoxsalen Bound
pdb|2FDU|A Chain A, Microsomal P450 2a6 With The Inhibitor N,N-Dimethyl(5-
(Pyridin-3-Yl)furan-2-Yl)methanamine Bound
pdb|2FDU|B Chain B, Microsomal P450 2a6 With The Inhibitor N,N-Dimethyl(5-
(Pyridin-3-Yl)furan-2-Yl)methanamine Bound
pdb|2FDU|C Chain C, Microsomal P450 2a6 With The Inhibitor N,N-Dimethyl(5-
(Pyridin-3-Yl)furan-2-Yl)methanamine Bound
pdb|2FDU|D Chain D, Microsomal P450 2a6 With The Inhibitor N,N-Dimethyl(5-
(Pyridin-3-Yl)furan-2-Yl)methanamine Bound
pdb|2FDV|A Chain A, Microsomal P450 2a6 With The Inhibitor
N-Methyl(5-(Pyridin- 3-Yl)furan-2-Yl)methanamine Bound
pdb|2FDV|B Chain B, Microsomal P450 2a6 With The Inhibitor
N-Methyl(5-(Pyridin- 3-Yl)furan-2-Yl)methanamine Bound
pdb|2FDV|C Chain C, Microsomal P450 2a6 With The Inhibitor
N-Methyl(5-(Pyridin- 3-Yl)furan-2-Yl)methanamine Bound
pdb|2FDV|D Chain D, Microsomal P450 2a6 With The Inhibitor
N-Methyl(5-(Pyridin- 3-Yl)furan-2-Yl)methanamine Bound
pdb|2FDW|A Chain A, Crystal Structure Of Human Microsomal P450 2a6 With The
Inhibitor (5-(Pyridin-3-Yl)furan-2-Yl)methanamine Bound
pdb|2FDW|B Chain B, Crystal Structure Of Human Microsomal P450 2a6 With The
Inhibitor (5-(Pyridin-3-Yl)furan-2-Yl)methanamine Bound
pdb|2FDW|C Chain C, Crystal Structure Of Human Microsomal P450 2a6 With The
Inhibitor (5-(Pyridin-3-Yl)furan-2-Yl)methanamine Bound
pdb|2FDW|D Chain D, Crystal Structure Of Human Microsomal P450 2a6 With The
Inhibitor (5-(Pyridin-3-Yl)furan-2-Yl)methanamine Bound
pdb|2FDY|A Chain A, Microsomal P450 2a6 With The Inhibitor Adrithiol Bound
pdb|2FDY|B Chain B, Microsomal P450 2a6 With The Inhibitor Adrithiol Bound
pdb|2FDY|C Chain C, Microsomal P450 2a6 With The Inhibitor Adrithiol Bound
pdb|2FDY|D Chain D, Microsomal P450 2a6 With The Inhibitor Adrithiol Bound
pdb|3T3R|A Chain A, Human Cytochrome P450 2a6 In Complex With Pilocarpine
pdb|3T3R|B Chain B, Human Cytochrome P450 2a6 In Complex With Pilocarpine
pdb|3T3R|C Chain C, Human Cytochrome P450 2a6 In Complex With Pilocarpine
pdb|3T3R|D Chain D, Human Cytochrome P450 2a6 In Complex With Pilocarpine
pdb|4EJJ|A Chain A, Human Cytochrome P450 2a6 In Complex With Nicotine
pdb|4EJJ|B Chain B, Human Cytochrome P450 2a6 In Complex With Nicotine
pdb|4EJJ|C Chain C, Human Cytochrome P450 2a6 In Complex With Nicotine
pdb|4EJJ|D Chain D, Human Cytochrome P450 2a6 In Complex With Nicotine
Length = 476
Score = 54.3 bits (129), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 28/70 (40%), Positives = 37/70 (52%)
Query: 35 RLPPGPWKLPVLGNLHQLNGDSPHVSLQHLSNDYGPLMFLQLGSVPTLVISSADVAREIF 94
+LPPGP LP +GN QLN + + SL +S YGP+ + LG +V+ D RE
Sbjct: 10 KLPPGPTPLPFIGNYLQLNTEQMYNSLMKISERYGPVFTIHLGPRRVVVLCGHDAVREAL 69
Query: 95 RTHDLIFSGR 104
FSGR
Sbjct: 70 VDQAEEFSGR 79
>pdb|3EBS|A Chain A, Human Cytochrome P450 2a6 I208sI300FG301AS369G IN COMPLEX
With Phenacetin
pdb|3EBS|B Chain B, Human Cytochrome P450 2a6 I208sI300FG301AS369G IN COMPLEX
With Phenacetin
pdb|3EBS|C Chain C, Human Cytochrome P450 2a6 I208sI300FG301AS369G IN COMPLEX
With Phenacetin
pdb|3EBS|D Chain D, Human Cytochrome P450 2a6 I208sI300FG301AS369G IN COMPLEX
With Phenacetin
pdb|3T3Q|A Chain A, Human Cytochrome P450 2a6 I208sI300FG301AS369G IN COMPLEX
WITH Pilocarpine
pdb|3T3Q|B Chain B, Human Cytochrome P450 2a6 I208sI300FG301AS369G IN COMPLEX
WITH Pilocarpine
pdb|3T3Q|C Chain C, Human Cytochrome P450 2a6 I208sI300FG301AS369G IN COMPLEX
WITH Pilocarpine
pdb|3T3Q|D Chain D, Human Cytochrome P450 2a6 I208sI300FG301AS369G IN COMPLEX
WITH Pilocarpine
Length = 476
Score = 54.3 bits (129), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 28/70 (40%), Positives = 37/70 (52%)
Query: 35 RLPPGPWKLPVLGNLHQLNGDSPHVSLQHLSNDYGPLMFLQLGSVPTLVISSADVAREIF 94
+LPPGP LP +GN QLN + + SL +S YGP+ + LG +V+ D RE
Sbjct: 10 KLPPGPTPLPFIGNYLQLNTEQMYNSLMKISERYGPVFTIHLGPRRVVVLCGHDAVREAL 69
Query: 95 RTHDLIFSGR 104
FSGR
Sbjct: 70 VDQAEEFSGR 79
>pdb|1R9O|A Chain A, Crystal Structure Of P4502c9 With Flurbiprofen Bound
Length = 477
Score = 53.5 bits (127), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 44/168 (26%), Positives = 74/168 (44%), Gaps = 21/168 (12%)
Query: 25 LQEKTRVLAKRLPPGPWKLPVLGNLHQLNGDSPHVSLQHLSNDYGPLMFLQLGSVPTLVI 84
+ +KT +LPPGP LPV+GN+ Q+ SL +LS YGP+ L G P +V+
Sbjct: 1 MAKKTSSGRGKLPPGPTPLPVIGNILQIGIKDISKSLTNLSKVYGPVFTLYFGLKPIVVL 60
Query: 85 SSADVAREIFRTHDLIFSGR---PRSYAAK-------------KAVRKIVIMEILS---S 125
+ +E FSGR P + A K +R+ +M + +
Sbjct: 61 HGYEAVKEALIDLGEEFSGRGIFPLAERANRGFGIVFSNGKKWKEIRRFSLMTLRNFGMG 120
Query: 126 KRVQSFQAVRYEEVMLVLQFIAQSSTKPIDLSRLTLLLSNNIVCRVAF 173
KR S + EE +++ + ++ P D + + N++C + F
Sbjct: 121 KR--SIEDRVQEEARCLVEELRKTKASPCDPTFILGCAPCNVICSIIF 166
>pdb|4GQS|A Chain A, Structure Of Human Microsomal Cytochrome P450 (cyp) 2c19
pdb|4GQS|B Chain B, Structure Of Human Microsomal Cytochrome P450 (cyp) 2c19
pdb|4GQS|C Chain C, Structure Of Human Microsomal Cytochrome P450 (cyp) 2c19
pdb|4GQS|D Chain D, Structure Of Human Microsomal Cytochrome P450 (cyp) 2c19
Length = 477
Score = 53.1 bits (126), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 43/167 (25%), Positives = 73/167 (43%), Gaps = 19/167 (11%)
Query: 25 LQEKTRVLAKRLPPGPWKLPVLGNLHQLNGDSPHVSLQHLSNDYGPLMFLQLGSVPTLVI 84
+ +KT +LPPGP LPV+GN+ Q++ SL +LS YGP+ L G +V+
Sbjct: 1 MAKKTSSGRGKLPPGPTPLPVIGNILQIDIKDVSKSLTNLSKIYGPVFTLYFGLERMVVL 60
Query: 85 SSADVAREIFRTHDLIFSGRPRSYAAKKAVRKIVIMEILSSKRVQ--------------- 129
+V +E FSGR A++A R I+ + KR +
Sbjct: 61 HGYEVVKEALIDLGEEFSGRGHFPLAERANRGFGIV-FSNGKRWKEIRRFSLMTLRNFGM 119
Query: 130 ---SFQAVRYEEVMLVLQFIAQSSTKPIDLSRLTLLLSNNIVCRVAF 173
S + EE +++ + ++ P D + + N++C + F
Sbjct: 120 GKRSIEDRVQEEARCLVEELRKTKASPCDPTFILGCAPCNVICSIIF 166
>pdb|1DT6|A Chain A, Structure Of Mammalian Cytochrome P450 2c5
pdb|1N6B|A Chain A, Microsomal Cytochrome P450 2c5/3lvdh Complex With A
Dimethyl Derivative Of Sulfaphenazole
pdb|1NR6|A Chain A, Microsomal Cytochrome P450 2c53LVDH COMPLEX WITH
DICLOFENAC
Length = 473
Score = 52.8 bits (125), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 38/158 (24%), Positives = 69/158 (43%), Gaps = 21/158 (13%)
Query: 35 RLPPGPWKLPVLGNLHQLNGDSPHVSLQHLSNDYGPLMFLQLGSVPTLVISSADVAREIF 94
+LPPGP P++GN+ Q++ SL S YGP+ + LG PT+V+ + +E
Sbjct: 10 KLPPGPTPFPIIGNILQIDAKDISKSLTKFSECYGPVFTVYLGMKPTVVLHGYEAVKEAL 69
Query: 95 RTHDLIFSGRP----------------RSYAAKKAVRKIVIMEILS---SKRVQSFQAVR 135
F+GR + K +R+ +M + + KR S +
Sbjct: 70 VDLGEEFAGRGSVPILEKVSKGLGIAFSNAKTWKEMRRFSLMTLRNFGMGKR--SIEDRI 127
Query: 136 YEEVMLVLQFIAQSSTKPIDLSRLTLLLSNNIVCRVAF 173
EE +++ + +++ P D + + N++C V F
Sbjct: 128 QEEARCLVEELRKTNASPCDPTFILGCAPCNVICSVIF 165
>pdb|2P85|A Chain A, Structure Of Human Lung Cytochrome P450 2a13 With Indole
Bound In Two Alternate Conformations
pdb|2P85|B Chain B, Structure Of Human Lung Cytochrome P450 2a13 With Indole
Bound In Two Alternate Conformations
pdb|2P85|C Chain C, Structure Of Human Lung Cytochrome P450 2a13 With Indole
Bound In Two Alternate Conformations
pdb|2P85|D Chain D, Structure Of Human Lung Cytochrome P450 2a13 With Indole
Bound In Two Alternate Conformations
pdb|2P85|E Chain E, Structure Of Human Lung Cytochrome P450 2a13 With Indole
Bound In Two Alternate Conformations
pdb|2P85|F Chain F, Structure Of Human Lung Cytochrome P450 2a13 With Indole
Bound In Two Alternate Conformations
pdb|3T3S|A Chain A, Human Cytochrome P450 2a13 In Complex With Pilocarpine
pdb|3T3S|B Chain B, Human Cytochrome P450 2a13 In Complex With Pilocarpine
pdb|3T3S|C Chain C, Human Cytochrome P450 2a13 In Complex With Pilocarpine
pdb|3T3S|D Chain D, Human Cytochrome P450 2a13 In Complex With Pilocarpine
pdb|3T3S|E Chain E, Human Cytochrome P450 2a13 In Complex With Pilocarpine
pdb|3T3S|F Chain F, Human Cytochrome P450 2a13 In Complex With Pilocarpine
pdb|3T3S|G Chain G, Human Cytochrome P450 2a13 In Complex With Pilocarpine
pdb|3T3S|H Chain H, Human Cytochrome P450 2a13 In Complex With Pilocarpine
pdb|4EJG|A Chain A, Human Cytochrome P450 2a13 In Complex With Nicotine
pdb|4EJG|B Chain B, Human Cytochrome P450 2a13 In Complex With Nicotine
pdb|4EJG|C Chain C, Human Cytochrome P450 2a13 In Complex With Nicotine
pdb|4EJG|D Chain D, Human Cytochrome P450 2a13 In Complex With Nicotine
pdb|4EJG|E Chain E, Human Cytochrome P450 2a13 In Complex With Nicotine
pdb|4EJG|F Chain F, Human Cytochrome P450 2a13 In Complex With Nicotine
pdb|4EJG|G Chain G, Human Cytochrome P450 2a13 In Complex With Nicotine
pdb|4EJG|H Chain H, Human Cytochrome P450 2a13 In Complex With Nicotine
pdb|4EJH|A Chain A, Human Cytochrome P450 2a13 In Complex With
4-(Methylnitrosamino)-1-(3- Pyridyl)-1-Butanone (Nnk)
pdb|4EJH|B Chain B, Human Cytochrome P450 2a13 In Complex With
4-(Methylnitrosamino)-1-(3- Pyridyl)-1-Butanone (Nnk)
pdb|4EJH|C Chain C, Human Cytochrome P450 2a13 In Complex With
4-(Methylnitrosamino)-1-(3- Pyridyl)-1-Butanone (Nnk)
pdb|4EJH|D Chain D, Human Cytochrome P450 2a13 In Complex With
4-(Methylnitrosamino)-1-(3- Pyridyl)-1-Butanone (Nnk)
pdb|4EJH|E Chain E, Human Cytochrome P450 2a13 In Complex With
4-(Methylnitrosamino)-1-(3- Pyridyl)-1-Butanone (Nnk)
pdb|4EJH|F Chain F, Human Cytochrome P450 2a13 In Complex With
4-(Methylnitrosamino)-1-(3- Pyridyl)-1-Butanone (Nnk)
pdb|4EJH|G Chain G, Human Cytochrome P450 2a13 In Complex With
4-(Methylnitrosamino)-1-(3- Pyridyl)-1-Butanone (Nnk)
pdb|4EJH|H Chain H, Human Cytochrome P450 2a13 In Complex With
4-(Methylnitrosamino)-1-(3- Pyridyl)-1-Butanone (Nnk)
pdb|4EJI|A Chain A, Human Cytochrome P450 2a13 In Complex With Two Molecules
Of 4- (Methylnitrosamino)-1-(3-Puridyl)-1-Butanone
Length = 476
Score = 52.8 bits (125), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 27/70 (38%), Positives = 37/70 (52%)
Query: 35 RLPPGPWKLPVLGNLHQLNGDSPHVSLQHLSNDYGPLMFLQLGSVPTLVISSADVAREIF 94
+LPPGP LP +GN QLN + + SL +S YGP+ + LG +V+ D +E
Sbjct: 10 KLPPGPTPLPFIGNYLQLNTEQMYNSLMKISERYGPVFTIHLGPRRVVVLCGHDAVKEAL 69
Query: 95 RTHDLIFSGR 104
FSGR
Sbjct: 70 VDQAEEFSGR 79
>pdb|1PQ2|A Chain A, Crystal Structure Of Human Drug Metabolizing Cytochrome
P450 2c8
pdb|1PQ2|B Chain B, Crystal Structure Of Human Drug Metabolizing Cytochrome
P450 2c8
pdb|2NNH|A Chain A, Cyp2c8dh Complexed With 2 Molecules Of 9-Cis Retinoic Acid
pdb|2NNH|B Chain B, Cyp2c8dh Complexed With 2 Molecules Of 9-Cis Retinoic Acid
pdb|2NNI|A Chain A, Cyp2c8dh Complexed With Montelukast
pdb|2NNJ|A Chain A, Cyp2c8dh Complexed With Felodipine
pdb|2VN0|A Chain A, Cyp2c8dh Complexed With Troglitazone
Length = 476
Score = 52.0 bits (123), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 36/157 (22%), Positives = 68/157 (43%), Gaps = 19/157 (12%)
Query: 35 RLPPGPWKLPVLGNLHQLNGDSPHVSLQHLSNDYGPLMFLQLGSVPTLVISSADVAREIF 94
+LPPGP LP++GN+ Q++ S + S YGP+ + G P +V + +E
Sbjct: 10 KLPPGPTPLPIIGNMLQIDVKDICKSFTNFSKVYGPVFTVYFGMNPIVVFHGYEAVKEAL 69
Query: 95 RTHDLIFSGRPRSYAAKKAVRKIVIMEILSSKRVQ------------------SFQAVRY 136
+ FSGR S +++ + + I+ + KR + S +
Sbjct: 70 IDNGEEFSGRGNSPISQRITKGLGIIS-SNGKRWKEIRRFSLTTLRNFGMGKRSIEDRVQ 128
Query: 137 EEVMLVLQFIAQSSTKPIDLSRLTLLLSNNIVCRVAF 173
EE +++ + ++ P D + + N++C V F
Sbjct: 129 EEAHCLVEELRKTKASPCDPTFILGCAPCNVICSVVF 165
>pdb|1OG2|A Chain A, Structure Of Human Cytochrome P450 Cyp2c9
pdb|1OG2|B Chain B, Structure Of Human Cytochrome P450 Cyp2c9
pdb|1OG5|A Chain A, Structure Of Human Cytochrome P450 Cyp2c9
pdb|1OG5|B Chain B, Structure Of Human Cytochrome P450 Cyp2c9
Length = 475
Score = 50.8 bits (120), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 42/163 (25%), Positives = 71/163 (43%), Gaps = 21/163 (12%)
Query: 30 RVLAKRLPPGPWKLPVLGNLHQLNGDSPHVSLQHLSNDYGPLMFLQLGSVPTLVISSADV 89
+ +K PPGP LPV+GN+ Q+ SL +LS YGP+ L G P +V+ +
Sbjct: 4 KTSSKGRPPGPTPLPVIGNILQIGIKDISKSLTNLSKVYGPVFTLYFGLKPIVVLHGYEA 63
Query: 90 AREIFRTHDLIFSGR---PRSYAAK-------------KAVRKIVIMEILS---SKRVQS 130
+E FSGR P + A K +R+ +M + + KR S
Sbjct: 64 VKEALIDLGEEFSGRGIFPLAERANRGFGIVFSNGKKWKEIRRFSLMTLRNFGMGKR--S 121
Query: 131 FQAVRYEEVMLVLQFIAQSSTKPIDLSRLTLLLSNNIVCRVAF 173
+ EE +++ + ++ P D + + N++C + F
Sbjct: 122 IEDRVQEEARCLVEELRKTKASPCDPTFILGCAPCNVICSIIF 164
>pdb|3E4E|A Chain A, Human Cytochrome P450 2e1 In Complex With The Inhibitor 4-
Methylpyrazole
pdb|3E4E|B Chain B, Human Cytochrome P450 2e1 In Complex With The Inhibitor 4-
Methylpyrazole
pdb|3E6I|A Chain A, Human Cytochrome P450 2e1 In Complex With The Inhibitor
Indazole
pdb|3E6I|B Chain B, Human Cytochrome P450 2e1 In Complex With The Inhibitor
Indazole
pdb|3GPH|A Chain A, Human Cytochrome P450 2e1 In Complex With
Omega-Imidazolyl-Decanoic Acid
pdb|3GPH|B Chain B, Human Cytochrome P450 2e1 In Complex With
Omega-Imidazolyl-Decanoic Acid
pdb|3KOH|A Chain A, Cytochrome P450 2e1 With Omega-Imidazolyl Octanoic Acid
pdb|3KOH|B Chain B, Cytochrome P450 2e1 With Omega-Imidazolyl Octanoic Acid
pdb|3LC4|A Chain A, Human Cytochrome P450 2e1 In Complex With
Omega-Imidazolyl-Dodecanoic Acid
pdb|3LC4|B Chain B, Human Cytochrome P450 2e1 In Complex With
Omega-Imidazolyl-Dodecanoic Acid
pdb|3T3Z|A Chain A, Human Cytochrome P450 2e1 In Complex With Pilocarpine
pdb|3T3Z|B Chain B, Human Cytochrome P450 2e1 In Complex With Pilocarpine
pdb|3T3Z|C Chain C, Human Cytochrome P450 2e1 In Complex With Pilocarpine
pdb|3T3Z|D Chain D, Human Cytochrome P450 2e1 In Complex With Pilocarpine
Length = 476
Score = 47.4 bits (111), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 37/155 (23%), Positives = 69/155 (44%), Gaps = 16/155 (10%)
Query: 35 RLPPGPWKLPVLGNLHQLNGDSPHVSLQHLSNDYGPLMFLQLGSVPTLVISSADVAREIF 94
+LPPGP+ LP++GNL QL + S L+ +GP+ L +GS +V+ +E
Sbjct: 10 KLPPGPFPLPIIGNLFQLELKNIPKSFTRLAQRFGPVFTLYVGSQRMVVMHGYKAVKEAL 69
Query: 95 RTHDLIFSGR---PRSYAAK------------KAVRKIVIMEILSSKRVQSFQAVRYE-E 138
+ FSGR P +A + K +R+ + + + + R + E
Sbjct: 70 LDYKDEFSGRGDLPAFHAHRDRGIIFNNGPTWKDIRRFSLTTLRNYGMGKQGNESRIQRE 129
Query: 139 VMLVLQFIAQSSTKPIDLSRLTLLLSNNIVCRVAF 173
+L+ + ++ +P D + L N++ + F
Sbjct: 130 AHFLLEALRKTQGQPFDPTFLIGCAPCNVIADILF 164
>pdb|3PM0|A Chain A, Structural Characterization Of The Complex Between Alpha-
Naphthoflavone And Human Cytochrome P450 1b1 (Cyp1b1)
Length = 507
Score = 44.7 bits (104), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 25/82 (30%), Positives = 44/82 (53%), Gaps = 2/82 (2%)
Query: 33 AKRLPPGPWKLPVLGNLHQLNGDSPHVSLQHLSNDYGPLMFLQLGSVPTLVISSADVARE 92
+K PPGP+ P++GN + G + H+S L+ YG + ++LGS P +V++ +
Sbjct: 7 SKGKPPGPFAWPLIGNAAAV-GQAAHLSFARLARRYGDVFQIRLGSCPIVVLNGERAIHQ 65
Query: 93 IFRTHDLIFSGRPRSYAAKKAV 114
F+ RP S+A+ + V
Sbjct: 66 ALVQQGSAFADRP-SFASFRVV 86
>pdb|3CZH|A Chain A, Crystal Structure Of Cyp2r1 In Complex With Vitamin D2
pdb|3CZH|B Chain B, Crystal Structure Of Cyp2r1 In Complex With Vitamin D2
Length = 481
Score = 40.4 bits (93), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 37/148 (25%), Positives = 59/148 (39%), Gaps = 20/148 (13%)
Query: 48 NLHQLNGDS--PHVSLQHLSNDYGPLMFLQLGSVPTLVISSADVAREIFRTHDLIFSGRP 105
N++ L S PHV ++ S YG + L LG + T+V++ DV +E IF+ RP
Sbjct: 25 NIYSLAASSELPHVYMRKQSQVYGEIFSLDLGGISTVVLNGYDVVKECLVHQSEIFADRP 84
Query: 106 ---------------RSYAAKKAV--RKIVIMEILSSKRVQ-SFQAVRYEEVMLVLQFIA 147
S + V R++ + Q SF++ EE I
Sbjct: 85 CLPLFMKMTKMGGLLNSRYGRGWVDHRRLAVNSFRYFGYGQKSFESKILEETKFFNDAIE 144
Query: 148 QSSTKPIDLSRLTLLLSNNIVCRVAFGQ 175
+P D +L +NI + FG+
Sbjct: 145 TYKGRPFDFKQLITNAVSNITNLIIFGE 172
>pdb|3C6G|A Chain A, Crystal Structure Of Cyp2r1 In Complex With Vitamin D3
pdb|3C6G|B Chain B, Crystal Structure Of Cyp2r1 In Complex With Vitamin D3
pdb|3DL9|A Chain A, Crystal Structure Of Cyp2r1 In Complex With
1-Alpha-Hydroxy- Vitamin D2
pdb|3DL9|B Chain B, Crystal Structure Of Cyp2r1 In Complex With
1-Alpha-Hydroxy- Vitamin D2
Length = 479
Score = 40.4 bits (93), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 37/148 (25%), Positives = 59/148 (39%), Gaps = 20/148 (13%)
Query: 48 NLHQLNGDS--PHVSLQHLSNDYGPLMFLQLGSVPTLVISSADVAREIFRTHDLIFSGRP 105
N++ L S PHV ++ S YG + L LG + T+V++ DV +E IF+ RP
Sbjct: 25 NIYSLAASSELPHVYMRKQSQVYGEIFSLDLGGISTVVLNGYDVVKECLVHQSEIFADRP 84
Query: 106 ---------------RSYAAKKAV--RKIVIMEILSSKRVQ-SFQAVRYEEVMLVLQFIA 147
S + V R++ + Q SF++ EE I
Sbjct: 85 CLPLFMKMTKMGGLLNSRYGRGWVDHRRLAVNSFRYFGYGQKSFESKILEETKFFNDAIE 144
Query: 148 QSSTKPIDLSRLTLLLSNNIVCRVAFGQ 175
+P D +L +NI + FG+
Sbjct: 145 TYKGRPFDFKQLITNAVSNITNLIIFGE 172
>pdb|3RUK|A Chain A, Human Cytochrome P450 Cyp17a1 In Complex With Abiraterone
pdb|3RUK|B Chain B, Human Cytochrome P450 Cyp17a1 In Complex With Abiraterone
pdb|3RUK|C Chain C, Human Cytochrome P450 Cyp17a1 In Complex With Abiraterone
pdb|3RUK|D Chain D, Human Cytochrome P450 Cyp17a1 In Complex With Abiraterone
pdb|3SWZ|A Chain A, Human Cytochrome P450 17a1 In Complex With Tok-001
pdb|3SWZ|B Chain B, Human Cytochrome P450 17a1 In Complex With Tok-001
pdb|3SWZ|C Chain C, Human Cytochrome P450 17a1 In Complex With Tok-001
pdb|3SWZ|D Chain D, Human Cytochrome P450 17a1 In Complex With Tok-001
Length = 494
Score = 33.9 bits (76), Expect = 0.052, Method: Compositional matrix adjust.
Identities = 26/135 (19%), Positives = 56/135 (41%), Gaps = 19/135 (14%)
Query: 58 HVSLQHLSNDYGPLMFLQLGSVPTLVISSADVAREIFRTHDLIFSGRPR----------- 106
H + L YGP+ +++G+ T+++ +A+E+ FSGRP+
Sbjct: 32 HNNFFKLQKKYGPIYSVRMGTKTTVIVGHHQLAKEVLIKKGKDFSGRPQMATLDIASNNR 91
Query: 107 -------SYAAKKAVRKIVIMEI-LSSKRVQSFQAVRYEEVMLVLQFIAQSSTKPIDLSR 158
S A + R++ + L Q + + +E+ + +A + + ID+S
Sbjct: 92 KGIAFADSGAHWQLHRRLAMATFALFKDGDQKLEKIICQEISTLCDMLATHNGQSIDISF 151
Query: 159 LTLLLSNNIVCRVAF 173
+ N++ + F
Sbjct: 152 PVFVAVTNVISLICF 166
>pdb|3K9V|A Chain A, Crystal Structure Of Rat Mitochondrial P450 24a1 S57d In
Complex With Chaps
pdb|3K9V|B Chain B, Crystal Structure Of Rat Mitochondrial P450 24a1 S57d In
Complex With Chaps
pdb|3K9Y|A Chain A, Crystal Structure Of Rat Mitochondrial P450 24a1 S57d In
Complex With Cymal-5
pdb|3K9Y|B Chain B, Crystal Structure Of Rat Mitochondrial P450 24a1 S57d In
Complex With Cymal-5
Length = 482
Score = 31.2 bits (69), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 29/106 (27%), Positives = 49/106 (46%), Gaps = 17/106 (16%)
Query: 38 PGPWKLPVLGNLHQL---NG-DSPHVSLQHLSNDYGPLMFLQLGSVPTLVISSADVAREI 93
PGP P+LG+L ++ G H +L YG + ++LGS ++ + S + +
Sbjct: 27 PGPTNWPLLGSLLEIFWKGGLKKQHDTLAEYHKKYGQIFRMKLGSFDSVHLGSPSLLEAL 86
Query: 94 FRTHDLIFSGRPRSYAAK--KAVRK-------IVIMEILSSKRVQS 130
+RT S P+ K KA R ++I+E +RV+S
Sbjct: 87 YRTE----SAHPQRLEIKPWKAYRDHRNEAYGLMILEGQEWQRVRS 128
>pdb|3QZ1|A Chain A, Crystal Structure Of Bovine Steroid Of 21-Hydroxylase
(P450c21)
pdb|3QZ1|B Chain B, Crystal Structure Of Bovine Steroid Of 21-Hydroxylase
(P450c21)
pdb|3QZ1|C Chain C, Crystal Structure Of Bovine Steroid Of 21-Hydroxylase
(P450c21)
pdb|3QZ1|D Chain D, Crystal Structure Of Bovine Steroid Of 21-Hydroxylase
(P450c21)
Length = 496
Score = 29.3 bits (64), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 43/166 (25%), Positives = 67/166 (40%), Gaps = 37/166 (22%)
Query: 39 GPWKLP-------VLGNLHQLNGDSPHVSLQHLSNDYGPLMFLQLGSVPTLVISSADVAR 91
G WKL V G LH L + P + L L+ GP+ L+LG +V++S
Sbjct: 21 GRWKLRNLHLPPLVPGFLHLLQPNLP-IHLLSLTQKLGPVYRLRLGLQEVVVLNSKRTIE 79
Query: 92 EIFRTHDLIFSGRPR--SY--------------------AAKKAVRKIVIMEILSSKRVQ 129
E + F+GRP+ SY A KK R +++ SS
Sbjct: 80 EAMIRKWVDFAGRPQIPSYKLVSQRCQDISLGDYSLLWKAHKKLTRSALLLGTRSSMEPW 139
Query: 130 SFQAVR-YEEVMLVLQFIAQSSTKPIDLSRLTLLLSNNIVCRVAFG 174
Q + + E M V + P+ + + LL+ +I+C + FG
Sbjct: 140 VDQLTQEFCERMRV------QAGAPVTIQKEFSLLTCSIICYLTFG 179
>pdb|3IBD|A Chain A, Crystal Structure Of A Cytochrome P450 2b6 Genetic Variant
In Complex With The Inhibitor
4-(4-Chlorophenyl)imidazole
pdb|3QOA|A Chain A, Crystal Structure Of A Human Cytochrome P450 2b6
(Y226hK262R) IN Complex With The Inhibitor
4-Benzylpyridine.
pdb|3QU8|A Chain A, Crystal Structure Of A Human Cytochrome P450 2b6
(Y226hK262R) IN Complex With The Inhibitor
4-(4-Nitrobenzyl)pyridine.
pdb|3QU8|B Chain B, Crystal Structure Of A Human Cytochrome P450 2b6
(Y226hK262R) IN Complex With The Inhibitor
4-(4-Nitrobenzyl)pyridine.
pdb|3QU8|C Chain C, Crystal Structure Of A Human Cytochrome P450 2b6
(Y226hK262R) IN Complex With The Inhibitor
4-(4-Nitrobenzyl)pyridine.
pdb|3QU8|D Chain D, Crystal Structure Of A Human Cytochrome P450 2b6
(Y226hK262R) IN Complex With The Inhibitor
4-(4-Nitrobenzyl)pyridine.
pdb|3QU8|E Chain E, Crystal Structure Of A Human Cytochrome P450 2b6
(Y226hK262R) IN Complex With The Inhibitor
4-(4-Nitrobenzyl)pyridine.
pdb|3QU8|F Chain F, Crystal Structure Of A Human Cytochrome P450 2b6
(Y226hK262R) IN Complex With The Inhibitor
4-(4-Nitrobenzyl)pyridine.
pdb|3UA5|A Chain A, Crystal Structure Of P450 2b6 (Y226hK262R) IN COMPLEX WITH
TWO Molecules Of Amlodipine
pdb|3UA5|B Chain B, Crystal Structure Of P450 2b6 (Y226hK262R) IN COMPLEX WITH
TWO Molecules Of Amlodipine
Length = 476
Score = 28.9 bits (63), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 28/127 (22%), Positives = 51/127 (40%), Gaps = 21/127 (16%)
Query: 68 YGPLMFLQLGSVPTLVISSADVAREIFRTHDLIFSGRP---------RSYAA-------K 111
YG + + LG P +++ + RE FSGR R Y
Sbjct: 43 YGDVFTVHLGPRPVVMLCGVEAIREALVDKAEAFSGRGKIAMVDPFFRGYGVIFANGNRW 102
Query: 112 KAVRKIVIMEILS---SKRVQSFQAVRYEEVMLVLQFIAQSSTKPIDLSRLTLLLSNNIV 168
K +R+ + + KR S + EE +++ + +S +D + L ++ NI+
Sbjct: 103 KVLRRFSVTTMRDFGMGKR--SVEERIQEEAQCLIEELRKSKGALMDPTFLFQSITANII 160
Query: 169 CRVAFGQ 175
C + FG+
Sbjct: 161 CSIVFGK 167
>pdb|3QI8|B Chain B, Evolved Variant Of Cytochrome P450 (Bm3, Cyp102a1)
pdb|3QI8|A Chain A, Evolved Variant Of Cytochrome P450 (Bm3, Cyp102a1)
Length = 472
Score = 26.9 bits (58), Expect = 5.7, Method: Compositional matrix adjust.
Identities = 34/145 (23%), Positives = 61/145 (42%), Gaps = 21/145 (14%)
Query: 38 PGPWKLPVLGNLHQLNGDSPHVSLQHLSNDYGPLMFLQLGSVPTLVISSADVAREIFRT- 96
P P L NL LN D P +L ++++ G + + T ISS + +E
Sbjct: 7 PQPKTFGELKNLPLLNTDKPVQALMKIADELGEIFKFEAPGRVTRYISSQRLVKEACDES 66
Query: 97 -------------HDLIFSGRPRSYAAKKAVRKI--VIMEILSSKRVQSFQAVRYE-EVM 140
D G S+ +K +K +++ LS + ++ + A+ + V
Sbjct: 67 RFDKNLSQARKFVRDFAGDGLATSWTHEKNWKKARNILLPRLSQQAMKGYHAMMVDIAVQ 126
Query: 141 LVLQFIAQSSTK----PIDLSRLTL 161
LV ++ +S + P D++RLTL
Sbjct: 127 LVQKWERLNSDEHIEVPEDMTRLTL 151
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.326 0.138 0.392
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 4,131,442
Number of Sequences: 62578
Number of extensions: 142811
Number of successful extensions: 486
Number of sequences better than 100.0: 29
Number of HSP's better than 100.0 without gapping: 26
Number of HSP's successfully gapped in prelim test: 3
Number of HSP's that attempted gapping in prelim test: 443
Number of HSP's gapped (non-prelim): 32
length of query: 175
length of database: 14,973,337
effective HSP length: 92
effective length of query: 83
effective length of database: 9,216,161
effective search space: 764941363
effective search space used: 764941363
T: 11
A: 40
X1: 15 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.7 bits)
S2: 48 (23.1 bits)