BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 041766
(387 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|3TL8|A Chain A, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|D Chain D, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|G Chain G, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|H Chain H, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
Length = 349
Score = 160 bits (404), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 103/299 (34%), Positives = 157/299 (52%), Gaps = 29/299 (9%)
Query: 75 QLPLFSFSSVSTATNKFSDANKLGEGGFGPVYKGVLKKGDEIAVKRLPGRSGQGLR-EMK 133
QL FS + A++ FS+ N LG GGFG VYKG L G +AVKRL QG + +
Sbjct: 24 QLKRFSLRELQVASDNFSNKNILGRGGFGKVYKGRLADGTLVAVKRLKEERXQGGELQFQ 83
Query: 134 NEASVIAKVQHKNLVRLLGCCIDKDEKILIYEYMPNKSLDFFLFD-PTKRMLLDWS---- 188
E +I+ H+NL+RL G C+ E++L+Y YM N S+ L + P + LDW
Sbjct: 84 TEVEMISMAVHRNLLRLRGFCMTPTERLLVYPYMANGSVASCLRERPESQPPLDWPKRQR 143
Query: 189 -ANYSSR-----------------LKVSNILLDKDINPKISDFGMARICGGNELQANTSR 230
A S+R +K +NILLD++ + DFG+A++ + +
Sbjct: 144 IALGSARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDXHVXXA- 202
Query: 231 IVGTYGYMSPEYAIQGIFSIKSDVFSFGVLLLEIVSGKKTTGFYR---TDSLTLLGYAWD 287
+ GT G+++PEY G S K+DVF +GV+LLE+++G++ R D + LL +
Sbjct: 203 VRGTIGHIAPEYLSTGKSSEKTDVFGYGVMLLELITGQRAFDLARLANDDDVMLLDWVKG 262
Query: 288 LWTSNRTLELIDPILEDEYSSKHMLLRYVNIALLCVQESADDRPTMNEVVSMLTDEAAA 346
L + L+D L+ Y + + + + +ALLC Q S +RP M+EVV ML + A
Sbjct: 263 LLKEKKLEALVDVDLQGNYKDEE-VEQLIQVALLCTQSSPMERPKMSEVVRMLEGDGLA 320
>pdb|3UIM|A Chain A, Structural Basis For The Impact Of Phosphorylation On
Plant Receptor- Like Kinase Bak1 Activation
pdb|3ULZ|A Chain A, Crystal Structure Of Apo Bak1
Length = 326
Score = 155 bits (393), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 101/299 (33%), Positives = 155/299 (51%), Gaps = 29/299 (9%)
Query: 75 QLPLFSFSSVSTATNKFSDANKLGEGGFGPVYKGVLKKGDEIAVKRLPGRSGQGLR-EMK 133
QL FS + A++ F + N LG GGFG VYKG L G +AVKRL QG + +
Sbjct: 16 QLKRFSLRELQVASDNFXNKNILGRGGFGKVYKGRLADGXLVAVKRLKEERTQGGELQFQ 75
Query: 134 NEASVIAKVQHKNLVRLLGCCIDKDEKILIYEYMPNKSLDFFLFD-PTKRMLLDWS---- 188
E +I+ H+NL+RL G C+ E++L+Y YM N S+ L + P + LDW
Sbjct: 76 TEVEMISMAVHRNLLRLRGFCMTPTERLLVYPYMANGSVASCLRERPESQPPLDWPKRQR 135
Query: 189 -ANYSSR-----------------LKVSNILLDKDINPKISDFGMARICGGNELQANTSR 230
A S+R +K +NILLD++ + DFG+A++ + +
Sbjct: 136 IALGSARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDXHVXXA- 194
Query: 231 IVGTYGYMSPEYAIQGIFSIKSDVFSFGVLLLEIVSGKKTTGFYR---TDSLTLLGYAWD 287
+ G G+++PEY G S K+DVF +GV+LLE+++G++ R D + LL +
Sbjct: 195 VRGXIGHIAPEYLSTGKSSEKTDVFGYGVMLLELITGQRAFDLARLANDDDVMLLDWVKG 254
Query: 288 LWTSNRTLELIDPILEDEYSSKHMLLRYVNIALLCVQESADDRPTMNEVVSMLTDEAAA 346
L + L+D L+ Y + + + + +ALLC Q S +RP M+EVV ML + A
Sbjct: 255 LLKEKKLEALVDVDLQGNYKDEE-VEQLIQVALLCTQSSPMERPKMSEVVRMLEGDGLA 312
>pdb|2NRY|A Chain A, Crystal Structure Of Irak-4
pdb|2NRY|B Chain B, Crystal Structure Of Irak-4
pdb|2NRY|C Chain C, Crystal Structure Of Irak-4
pdb|2NRY|D Chain D, Crystal Structure Of Irak-4
Length = 307
Score = 140 bits (354), Expect = 9e-34, Method: Compositional matrix adjust.
Identities = 102/297 (34%), Positives = 143/297 (48%), Gaps = 33/297 (11%)
Query: 79 FSFSSVSTATNKFSD------ANKLGEGGFGPVYKGVLKKGDEIAVKRLPGRSGQGLREM 132
FSF + TN F + NK+GEGGFG VYKG + +AVK+L E+
Sbjct: 15 FSFYELKNVTNNFDERPISVGGNKMGEGGFGVVYKGYVNN-TTVAVKKLAAMVDITTEEL 73
Query: 133 KN----EASVIAKVQHKNLVRLLGCCIDKDEKILIYEYMPNKSL--DFFLFDPTKRM--- 183
K E V+AK QH+NLV LLG D D+ L+Y YMPN SL D T +
Sbjct: 74 KQQFDQEIKVMAKCQHENLVELLGFSSDGDDLCLVYVYMPNGSLLDRLSCLDGTPPLSWH 133
Query: 184 --------------LLDWSANYSSRLKVSNILLDKDINPKISDFGMARICGGNELQANTS 229
L + + +K +NILLD+ KISDFG+AR S
Sbjct: 134 MRCKIAQGAANGINFLHENHHIHRDIKSANILLDEAFTAKISDFGLARASEKFAQTVMXS 193
Query: 230 RIVGTYGYMSPEYAIQGIFSIKSDVFSFGVLLLEIVSGKKTTGFYRTDSLTLLGYAWDLW 289
RIVGT YM+PE A++G + KSD++SFGV+LLEI++G +R L L
Sbjct: 194 RIVGTTAYMAPE-ALRGEITPKSDIYSFGVVLLEIITGLPAVDEHREPQLLLDIKEEIED 252
Query: 290 TSNRTLELIDPILEDEYSSKHMLLRYVNIALLCVQESADDRPTMNEVVSMLTDEAAA 346
+ ID + D S+ + ++A C+ E + RP + +V +L + A+
Sbjct: 253 EEKTIEDYIDKKMNDADSTS--VEAMYSVASQCLHEKKNKRPDIKKVQQLLQEMTAS 307
>pdb|2NRU|A Chain A, Crystal Structure Of Irak-4
pdb|2NRU|B Chain B, Crystal Structure Of Irak-4
pdb|2NRU|C Chain C, Crystal Structure Of Irak-4
pdb|2NRU|D Chain D, Crystal Structure Of Irak-4
Length = 307
Score = 139 bits (350), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 101/297 (34%), Positives = 142/297 (47%), Gaps = 33/297 (11%)
Query: 79 FSFSSVSTATNKFSD------ANKLGEGGFGPVYKGVLKKGDEIAVKRLPGRSGQGLREM 132
FSF + TN F + NK+GEGGFG VYKG + +AVK+L E+
Sbjct: 15 FSFYELKNVTNNFDERPISVGGNKMGEGGFGVVYKGYVNN-TTVAVKKLAAMVDITTEEL 73
Query: 133 KN----EASVIAKVQHKNLVRLLGCCIDKDEKILIYEYMPNKSL--DFFLFDPTKRM--- 183
K E V+AK QH+NLV LLG D D+ L+Y YMPN SL D T +
Sbjct: 74 KQQFDQEIKVMAKCQHENLVELLGFSSDGDDLCLVYVYMPNGSLLDRLSCLDGTPPLSWH 133
Query: 184 --------------LLDWSANYSSRLKVSNILLDKDINPKISDFGMARICGGNELQANTS 229
L + + +K +NILLD+ KISDFG+AR
Sbjct: 134 MRCKIAQGAANGINFLHENHHIHRDIKSANILLDEAFTAKISDFGLARASEKFAQTVMXX 193
Query: 230 RIVGTYGYMSPEYAIQGIFSIKSDVFSFGVLLLEIVSGKKTTGFYRTDSLTLLGYAWDLW 289
RIVGT YM+PE A++G + KSD++SFGV+LLEI++G +R L L
Sbjct: 194 RIVGTTAYMAPE-ALRGEITPKSDIYSFGVVLLEIITGLPAVDEHREPQLLLDIKEEIED 252
Query: 290 TSNRTLELIDPILEDEYSSKHMLLRYVNIALLCVQESADDRPTMNEVVSMLTDEAAA 346
+ ID + D S+ + ++A C+ E + RP + +V +L + A+
Sbjct: 253 EEKTIEDYIDKKMNDADSTS--VEAMYSVASQCLHEKKNKRPDIKKVQQLLQEMTAS 307
>pdb|2OIB|A Chain A, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|B Chain B, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|C Chain C, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|D Chain D, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIC|A Chain A, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|B Chain B, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|C Chain C, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|D Chain D, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OID|A Chain A, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|B Chain B, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|C Chain C, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|D Chain D, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
Length = 301
Score = 139 bits (349), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 101/297 (34%), Positives = 142/297 (47%), Gaps = 33/297 (11%)
Query: 79 FSFSSVSTATNKFSD------ANKLGEGGFGPVYKGVLKKGDEIAVKRLPGRSGQGLREM 132
FSF + TN F + NK+GEGGFG VYKG + +AVK+L E+
Sbjct: 9 FSFYELKNVTNNFDERPISVGGNKMGEGGFGVVYKGYVNN-TTVAVKKLAAMVDITTEEL 67
Query: 133 KN----EASVIAKVQHKNLVRLLGCCIDKDEKILIYEYMPNKSL--DFFLFDPTKRM--- 183
K E V+AK QH+NLV LLG D D+ L+Y YMPN SL D T +
Sbjct: 68 KQQFDQEIKVMAKCQHENLVELLGFSSDGDDLCLVYVYMPNGSLLDRLSCLDGTPPLSWH 127
Query: 184 --------------LLDWSANYSSRLKVSNILLDKDINPKISDFGMARICGGNELQANTS 229
L + + +K +NILLD+ KISDFG+AR
Sbjct: 128 MRCKIAQGAANGINFLHENHHIHRDIKSANILLDEAFTAKISDFGLARASEKFAQXVMXX 187
Query: 230 RIVGTYGYMSPEYAIQGIFSIKSDVFSFGVLLLEIVSGKKTTGFYRTDSLTLLGYAWDLW 289
RIVGT YM+PE A++G + KSD++SFGV+LLEI++G +R L L
Sbjct: 188 RIVGTTAYMAPE-ALRGEITPKSDIYSFGVVLLEIITGLPAVDEHREPQLLLDIKEEIED 246
Query: 290 TSNRTLELIDPILEDEYSSKHMLLRYVNIALLCVQESADDRPTMNEVVSMLTDEAAA 346
+ ID + D S+ + ++A C+ E + RP + +V +L + A+
Sbjct: 247 EEKTIEDYIDKKMNDADSTS--VEAMYSVASQCLHEKKNKRPDIKKVQQLLQEMTAS 301
>pdb|3HGK|A Chain A, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|B Chain B, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|C Chain C, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|D Chain D, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
Length = 327
Score = 138 bits (347), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 95/274 (34%), Positives = 151/274 (55%), Gaps = 26/274 (9%)
Query: 87 ATNKFSDANKLGEGGFGPVYKGVLKKGDEIAVKRLPGRSGQGLREMKNEASVIAKVQHKN 146
ATN F +G G FG VYKGVL+ G ++A+KR S QG+ E + E ++ +H +
Sbjct: 37 ATNNFDHKFLIGHGVFGKVYKGVLRDGAKVALKRRTPESSQGIEEFETEIETLSFCRHPH 96
Query: 147 LVRLLGCCIDKDEKILIYEYMPNKSLDFFLFD---PTKRM-----------------LLD 186
LV L+G C +++E ILIY+YM N +L L+ PT M L
Sbjct: 97 LVSLIGFCDERNEMILIYKYMENGNLKRHLYGSDLPTMSMSWEQRLEICIGAARGLHYLH 156
Query: 187 WSANYSSRLKVSNILLDKDINPKISDFGMARICGGNEL-QANTSRIV-GTYGYMSPEYAI 244
A +K NILLD++ PKI+DFG+++ G EL Q + +V GT GY+ PEY I
Sbjct: 157 TRAIIHRDVKSINILLDENFVPKITDFGISK--KGTELGQTHLXXVVKGTLGYIDPEYFI 214
Query: 245 QGIFSIKSDVFSFGVLLLEIVSGKKT-TGFYRTDSLTLLGYAWDLWTSNRTLELIDPILE 303
+G + KSDV+SFGV+L E++ + + + L +A + + + +++DP L
Sbjct: 215 KGRLTEKSDVYSFGVVLFEVLCARSAIVQSLPREMVNLAEWAVESHNNGQLEQIVDPNLA 274
Query: 304 DEYSSKHMLLRYVNIALLCVQESADDRPTMNEVV 337
D+ + L ++ + A+ C+ S++DRP+M +V+
Sbjct: 275 DKIRPES-LRKFGDTAVKCLALSSEDRPSMGDVL 307
>pdb|2QKW|B Chain B, Structural Basis For Activation Of Plant Immunity By
Bacterial Effector Protein Avrpto
Length = 321
Score = 138 bits (347), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 95/274 (34%), Positives = 151/274 (55%), Gaps = 26/274 (9%)
Query: 87 ATNKFSDANKLGEGGFGPVYKGVLKKGDEIAVKRLPGRSGQGLREMKNEASVIAKVQHKN 146
ATN F +G G FG VYKGVL+ G ++A+KR S QG+ E + E ++ +H +
Sbjct: 37 ATNNFDHKFLIGHGVFGKVYKGVLRDGAKVALKRRTPESSQGIEEFETEIETLSFCRHPH 96
Query: 147 LVRLLGCCIDKDEKILIYEYMPNKSLDFFLFD---PTKRM-----------------LLD 186
LV L+G C +++E ILIY+YM N +L L+ PT M L
Sbjct: 97 LVSLIGFCDERNEMILIYKYMENGNLKRHLYGSDLPTMSMSWEQRLEICIGAARGLHYLH 156
Query: 187 WSANYSSRLKVSNILLDKDINPKISDFGMARICGGNEL-QANTSRIV-GTYGYMSPEYAI 244
A +K NILLD++ PKI+DFG+++ G EL Q + +V GT GY+ PEY I
Sbjct: 157 TRAIIHRDVKSINILLDENFVPKITDFGISK--KGTELDQTHLXXVVKGTLGYIDPEYFI 214
Query: 245 QGIFSIKSDVFSFGVLLLEIVSGKKT-TGFYRTDSLTLLGYAWDLWTSNRTLELIDPILE 303
+G + KSDV+SFGV+L E++ + + + L +A + + + +++DP L
Sbjct: 215 KGRLTEKSDVYSFGVVLFEVLCARSAIVQSLPREMVNLAEWAVESHNNGQLEQIVDPNLA 274
Query: 304 DEYSSKHMLLRYVNIALLCVQESADDRPTMNEVV 337
D+ + L ++ + A+ C+ S++DRP+M +V+
Sbjct: 275 DKIRPES-LRKFGDTAVKCLALSSEDRPSMGDVL 307
>pdb|2O8Y|A Chain A, Apo Irak4 Kinase Domain
pdb|2O8Y|B Chain B, Apo Irak4 Kinase Domain
Length = 298
Score = 133 bits (334), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 100/297 (33%), Positives = 138/297 (46%), Gaps = 33/297 (11%)
Query: 79 FSFSSVSTATNKFSD------ANKLGEGGFGPVYKGVLKKGDEIAVKRLPGRSGQGLREM 132
FSF + TN F + NK GEGGFG VYKG + +AVK+L E+
Sbjct: 6 FSFYELKNVTNNFDERPISVGGNKXGEGGFGVVYKGYVNN-TTVAVKKLAAMVDITTEEL 64
Query: 133 KN----EASVIAKVQHKNLVRLLGCCIDKDEKILIYEYMPNKSL--DFFLFDPTKRM--- 183
K E V AK QH+NLV LLG D D+ L+Y Y PN SL D T +
Sbjct: 65 KQQFDQEIKVXAKCQHENLVELLGFSSDGDDLCLVYVYXPNGSLLDRLSCLDGTPPLSWH 124
Query: 184 --------------LLDWSANYSSRLKVSNILLDKDINPKISDFGMARICGGNELQANTS 229
L + + +K +NILLD+ KISDFG+AR S
Sbjct: 125 XRCKIAQGAANGINFLHENHHIHRDIKSANILLDEAFTAKISDFGLARASEKFAQXVXXS 184
Query: 230 RIVGTYGYMSPEYAIQGIFSIKSDVFSFGVLLLEIVSGKKTTGFYRTDSLTLLGYAWDLW 289
RIVGT Y +PE A++G + KSD++SFGV+LLEI++G +R L L
Sbjct: 185 RIVGTTAYXAPE-ALRGEITPKSDIYSFGVVLLEIITGLPAVDEHREPQLLLDIKEEIED 243
Query: 290 TSNRTLELIDPILEDEYSSKHMLLRYVNIALLCVQESADDRPTMNEVVSMLTDEAAA 346
+ ID D S+ + ++A C+ E + RP + +V +L + A+
Sbjct: 244 EEKTIEDYIDKKXNDADSTS--VEAXYSVASQCLHEKKNKRPDIKKVQQLLQEXTAS 298
>pdb|3A4O|X Chain X, Lyn Kinase Domain
Length = 286
Score = 99.4 bits (246), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 91/270 (33%), Positives = 130/270 (48%), Gaps = 45/270 (16%)
Query: 96 KLGEGGFGPVYKGVLKKGDEIAVKRL-PGR-SGQGLREMKNEASVIAKVQHKNLVRLLGC 153
+LG G FG V+ G ++AVK L PG S Q E EA+++ +QH LVRL
Sbjct: 20 RLGAGQFGEVWMGYYNNSTKVAVKTLKPGTMSVQAFLE---EANLMKTLQHDKLVRLYAV 76
Query: 154 CIDKDEKILIYEYMPNKSL-DFFLFDPTKRMLL----DWSA------------NYSSR-L 195
++ +I EYM SL DF D ++LL D+SA NY R L
Sbjct: 77 VTREEPIYIITEYMAKGSLLDFLKSDEGGKVLLPKLIDFSAQIAEGMAYIERKNYIHRDL 136
Query: 196 KVSNILLDKDINPKISDFGMARICGGNELQANTSRIVGTYGYMSPEYAIQGIFSIKSDVF 255
+ +N+L+ + + KI+DFG+AR+ NE A + +PE G F+IKSDV+
Sbjct: 137 RAANVLVSESLMCKIADFGLARVIEDNEYTAREGAKFPI-KWTAPEAINFGCFTIKSDVW 195
Query: 256 SFGVLLLEIVSGKKTTGFYRT--DSLTLLGYAWDL-WTSNRTLELIDPILEDEYSSKHML 312
SFG+LL EIV+ K RT D +T L + + N EL D
Sbjct: 196 SFGILLYEIVTYGKIPYPGRTNADVMTALSQGYRMPRVENCPDELYD------------- 242
Query: 313 LRYVNIALLCVQESADDRPTMNEVVSMLTD 342
I +C +E A++RPT + + S+L D
Sbjct: 243 -----IMKMCWKEKAEERPTFDYLQSVLDD 267
>pdb|2ZV7|A Chain A, Lyn Tyrosine Kinase Domain, Apo Form
pdb|2ZV8|A Chain A, Lyn Tyrosine Kinase Domain-Amp-Pnp Complex
pdb|2ZV9|A Chain A, Lyn Tyrosine Kinase Domain-Pp2 Complex
pdb|2ZVA|A Chain A, Lyn Tyrosine Kinase Domain-dasatinib Complex
Length = 279
Score = 96.3 bits (238), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 86/269 (31%), Positives = 133/269 (49%), Gaps = 43/269 (15%)
Query: 96 KLGEGGFGPVYKGVLKKGDEIAVKRL-PGR-SGQGLREMKNEASVIAKVQHKNLVRLLGC 153
KLG G FG V+ G ++AVK L PG S Q E EA+++ +QH LVRL
Sbjct: 19 KLGAGQFGEVWMGYYNNSTKVAVKTLKPGTMSVQAFLE---EANLMKTLQHDKLVRLYAV 75
Query: 154 CIDKDEKILIYEYMPNKSL-DFFLFDPTKRMLL----DWSA------------NYSSR-L 195
++ +I E+M SL DF D ++LL D+SA NY R L
Sbjct: 76 VTKEEPIYIITEFMAKGSLLDFLKSDEGGKVLLPKLIDFSAQIAEGMAYIERKNYIHRDL 135
Query: 196 KVSNILLDKDINPKISDFGMARICGGNELQANTSRIVGTYGYMSPEYAIQGIFSIKSDVF 255
+ +N+L+ + + KI+DFG+AR+ NE A + +PE G F+IKS+V+
Sbjct: 136 RAANVLVSESLMCKIADFGLARVIEDNEYTAREGAKFPI-KWTAPEAINFGCFTIKSNVW 194
Query: 256 SFGVLLLEIVSGKKTTGFYRT--DSLTLLGYAWDLWTSNRTLELIDPILEDEYSSKHMLL 313
SFG+LL EIV+ K RT D ++ L + + P +E+ + ++
Sbjct: 195 SFGILLYEIVTYGKIPYPGRTNADVMSALSQGYRM-----------PRMENCPDELYDIM 243
Query: 314 RYVNIALLCVQESADDRPTMNEVVSMLTD 342
+ +C +E A++RPT + + S+L D
Sbjct: 244 K------MCWKEKAEERPTFDYLQSVLDD 266
>pdb|2OFU|A Chain A, X-Ray Crystal Structure Of 2-Aminopyrimidine Carbamate 43
Bound To Lck
Length = 273
Score = 95.1 bits (235), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 84/267 (31%), Positives = 128/267 (47%), Gaps = 40/267 (14%)
Query: 96 KLGEGGFGPVYKGVLKKGDEIAVKRLPGRSGQGLREMKNEASVIAKVQHKNLVRLLGCCI 155
+LG G FG V+ G ++AVK L + EA+++ ++QH+ LVRL +
Sbjct: 22 RLGAGQFGEVWMGYYNGHTKVAVKSL-KQGSMSPDAFLAEANLMKQLQHQRLVRLYAV-V 79
Query: 156 DKDEKILIYEYMPNKSLDFFLFDP-----TKRMLLDWSA------------NYSSR-LKV 197
++ +I EYM N SL FL P T LLD +A NY R L+
Sbjct: 80 TQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERNYIHRDLRA 139
Query: 198 SNILLDKDINPKISDFGMARICGGNELQANTSRIVGTYGYMSPEYAIQGIFSIKSDVFSF 257
+NIL+ ++ KI+DFG+AR+ NE A + +PE G F+IKSDV+SF
Sbjct: 140 ANILVSDTLSCKIADFGLARLIEDNEXTAREGAKFPI-KWTAPEAINYGTFTIKSDVWSF 198
Query: 258 GVLLLEIVSGKKT--TGFYRTDSLTLLGYAWDLWTSNRTLELIDPILEDEYSSKHMLLRY 315
G+LL EIV+ + G + + L R ++ P ++ + L+R
Sbjct: 199 GILLTEIVTHGRIPYPGMTNPEVIQNL---------ERGYRMVRP--DNCPEELYQLMR- 246
Query: 316 VNIALLCVQESADDRPTMNEVVSMLTD 342
LC +E +DRPT + + S+L D
Sbjct: 247 -----LCWKERPEDRPTFDYLRSVLED 268
>pdb|3BYS|A Chain A, Co-Crystal Structure Of Lck And Aminopyrimidine Amide 10b
pdb|3BYU|A Chain A, Co-Crystal Structure Of Lck And Aminopyrimidine Reverse
Amide 23
Length = 277
Score = 95.1 bits (235), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 84/269 (31%), Positives = 128/269 (47%), Gaps = 40/269 (14%)
Query: 94 ANKLGEGGFGPVYKGVLKKGDEIAVKRLPGRSGQGLREMKNEASVIAKVQHKNLVRLLGC 153
+LG G FG V+ G ++AVK L + EA+++ ++QH+ LVRL
Sbjct: 24 VERLGAGQFGEVWMGYYNGHTKVAVKSL-KQGSMSPDAFLAEANLMKQLQHQRLVRLYAV 82
Query: 154 CIDKDEKILIYEYMPNKSLDFFLFDP-----TKRMLLDWSA------------NYSSR-L 195
+ ++ +I EYM N SL FL P T LLD +A NY R L
Sbjct: 83 -VTQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERNYIHRDL 141
Query: 196 KVSNILLDKDINPKISDFGMARICGGNELQANTSRIVGTYGYMSPEYAIQGIFSIKSDVF 255
+ +NIL+ ++ KI+DFG+AR+ NE A + +PE G F+IKSDV+
Sbjct: 142 RAANILVSDTLSCKIADFGLARLIEDNEYTAREGAKFPI-KWTAPEAINYGTFTIKSDVW 200
Query: 256 SFGVLLLEIVSGKKT--TGFYRTDSLTLLGYAWDLWTSNRTLELIDPILEDEYSSKHMLL 313
SFG+LL EIV+ + G + + L R ++ P ++ + L+
Sbjct: 201 SFGILLTEIVTHGRIPYPGMTNPEVIQNL---------ERGYRMVRP--DNCPEELYQLM 249
Query: 314 RYVNIALLCVQESADDRPTMNEVVSMLTD 342
R LC +E +DRPT + + S+L D
Sbjct: 250 R------LCWKERPEDRPTFDYLRSVLED 272
>pdb|2PL0|A Chain A, Lck Bound To Imatinib
Length = 289
Score = 95.1 bits (235), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 84/267 (31%), Positives = 128/267 (47%), Gaps = 40/267 (14%)
Query: 96 KLGEGGFGPVYKGVLKKGDEIAVKRLPGRSGQGLREMKNEASVIAKVQHKNLVRLLGCCI 155
+LG G FG V+ G ++AVK L + EA+++ ++QH+ LVRL +
Sbjct: 30 RLGAGQFGEVWMGYYNGHTKVAVKSL-KQGSMSPDAFLAEANLMKQLQHQRLVRLY-AVV 87
Query: 156 DKDEKILIYEYMPNKSLDFFLFDP-----TKRMLLDWSA------------NYSSR-LKV 197
++ +I EYM N SL FL P T LLD +A NY R L+
Sbjct: 88 TQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERNYIHRDLRA 147
Query: 198 SNILLDKDINPKISDFGMARICGGNELQANTSRIVGTYGYMSPEYAIQGIFSIKSDVFSF 257
+NIL+ ++ KI+DFG+AR+ NE A + +PE G F+IKSDV+SF
Sbjct: 148 ANILVSDTLSCKIADFGLARLIEDNEYTAREGAKFPI-KWTAPEAINYGTFTIKSDVWSF 206
Query: 258 GVLLLEIVSGKKT--TGFYRTDSLTLLGYAWDLWTSNRTLELIDPILEDEYSSKHMLLRY 315
G+LL EIV+ + G + + L R ++ P ++ + L+R
Sbjct: 207 GILLTEIVTHGRIPYPGMTNPEVIQNL---------ERGYRMVRP--DNCPEELYQLMR- 254
Query: 316 VNIALLCVQESADDRPTMNEVVSMLTD 342
LC +E +DRPT + + S+L D
Sbjct: 255 -----LCWKERPEDRPTFDYLRSVLED 276
>pdb|3KXZ|A Chain A, The Complex Crystal Structure Of Lck With A Probe Molecule
W259
Length = 287
Score = 95.1 bits (235), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 84/267 (31%), Positives = 128/267 (47%), Gaps = 40/267 (14%)
Query: 96 KLGEGGFGPVYKGVLKKGDEIAVKRLPGRSGQGLREMKNEASVIAKVQHKNLVRLLGCCI 155
+LG G FG V+ G ++AVK L + EA+++ ++QH+ LVRL +
Sbjct: 28 RLGAGQFGEVWMGYYNGHTKVAVKSL-KQGSMSPDAFLAEANLMKQLQHQRLVRLY-AVV 85
Query: 156 DKDEKILIYEYMPNKSLDFFLFDP-----TKRMLLDWSA------------NYSSR-LKV 197
++ +I EYM N SL FL P T LLD +A NY R L+
Sbjct: 86 TQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERNYIHRDLRA 145
Query: 198 SNILLDKDINPKISDFGMARICGGNELQANTSRIVGTYGYMSPEYAIQGIFSIKSDVFSF 257
+NIL+ ++ KI+DFG+AR+ NE A + +PE G F+IKSDV+SF
Sbjct: 146 ANILVSDTLSCKIADFGLARLIEDNEXTAREGAKFPI-KWTAPEAINYGTFTIKSDVWSF 204
Query: 258 GVLLLEIVSGKKT--TGFYRTDSLTLLGYAWDLWTSNRTLELIDPILEDEYSSKHMLLRY 315
G+LL EIV+ + G + + L R ++ P ++ + L+R
Sbjct: 205 GILLTEIVTHGRIPYPGMTNPEVIQNL---------ERGYRMVRP--DNCPEELYQLMR- 252
Query: 316 VNIALLCVQESADDRPTMNEVVSMLTD 342
LC +E +DRPT + + S+L D
Sbjct: 253 -----LCWKERPEDRPTFDYLRSVLED 274
>pdb|2OFV|A Chain A, Crystal Structure Of Aminoquinazoline 1 Bound To Lck
pdb|2OFV|B Chain B, Crystal Structure Of Aminoquinazoline 1 Bound To Lck
pdb|3B2W|A Chain A, Crystal Structure Of Pyrimidine Amide 11 Bound To Lck
Length = 277
Score = 95.1 bits (235), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 84/269 (31%), Positives = 128/269 (47%), Gaps = 40/269 (14%)
Query: 94 ANKLGEGGFGPVYKGVLKKGDEIAVKRLPGRSGQGLREMKNEASVIAKVQHKNLVRLLGC 153
+LG G FG V+ G ++AVK L + EA+++ ++QH+ LVRL
Sbjct: 23 VERLGAGQFGEVWMGYYNGHTKVAVKSL-KQGSMSPDAFLAEANLMKQLQHQRLVRLYAV 81
Query: 154 CIDKDEKILIYEYMPNKSLDFFLFDP-----TKRMLLDWSA------------NYSSR-L 195
+ ++ +I EYM N SL FL P T LLD +A NY R L
Sbjct: 82 -VTQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERNYIHRDL 140
Query: 196 KVSNILLDKDINPKISDFGMARICGGNELQANTSRIVGTYGYMSPEYAIQGIFSIKSDVF 255
+ +NIL+ ++ KI+DFG+AR+ NE A + +PE G F+IKSDV+
Sbjct: 141 RAANILVSDTLSCKIADFGLARLIEDNEYTAREGAKFPI-KWTAPEAINYGTFTIKSDVW 199
Query: 256 SFGVLLLEIVSGKKT--TGFYRTDSLTLLGYAWDLWTSNRTLELIDPILEDEYSSKHMLL 313
SFG+LL EIV+ + G + + L R ++ P ++ + L+
Sbjct: 200 SFGILLTEIVTHGRIPYPGMTNPEVIQNL---------ERGYRMVRP--DNCPEELYQLM 248
Query: 314 RYVNIALLCVQESADDRPTMNEVVSMLTD 342
R LC +E +DRPT + + S+L D
Sbjct: 249 R------LCWKERPEDRPTFDYLRSVLED 271
>pdb|3BYM|A Chain A, X-Ray Co-Crystal Structure Aminobenzimidazole Triazine 1
Bound To Lck
Length = 272
Score = 95.1 bits (235), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 84/267 (31%), Positives = 128/267 (47%), Gaps = 40/267 (14%)
Query: 96 KLGEGGFGPVYKGVLKKGDEIAVKRLPGRSGQGLREMKNEASVIAKVQHKNLVRLLGCCI 155
+LG G FG V+ G ++AVK L + EA+++ ++QH+ LVRL +
Sbjct: 21 RLGAGQFGEVWMGYYNGHTKVAVKSL-KQGSMSPDAFLAEANLMKQLQHQRLVRLYAV-V 78
Query: 156 DKDEKILIYEYMPNKSLDFFLFDP-----TKRMLLDWSA------------NYSSR-LKV 197
++ +I EYM N SL FL P T LLD +A NY R L+
Sbjct: 79 TQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERNYIHRDLRA 138
Query: 198 SNILLDKDINPKISDFGMARICGGNELQANTSRIVGTYGYMSPEYAIQGIFSIKSDVFSF 257
+NIL+ ++ KI+DFG+AR+ NE A + +PE G F+IKSDV+SF
Sbjct: 139 ANILVSDTLSCKIADFGLARLIEDNEXTAREGAKFPI-KWTAPEAINYGTFTIKSDVWSF 197
Query: 258 GVLLLEIVSGKKT--TGFYRTDSLTLLGYAWDLWTSNRTLELIDPILEDEYSSKHMLLRY 315
G+LL EIV+ + G + + L R ++ P ++ + L+R
Sbjct: 198 GILLTEIVTHGRIPYPGMTNPEVIQNL---------ERGYRMVRP--DNCPEELYQLMR- 245
Query: 316 VNIALLCVQESADDRPTMNEVVSMLTD 342
LC +E +DRPT + + S+L D
Sbjct: 246 -----LCWKERPEDRPTFDYLRSVLED 267
>pdb|1QPE|A Chain A, Structural Analysis Of The Lymphocyte-Specific Kinase Lck
In Complex With Non-Selective And Src Family Selective
Kinase Inhibitors
pdb|1QPJ|A Chain A, Crystal Structure Of The Lymphocyte-Specific Kinase Lck In
Complex With Staurosporine.
pdb|1QPC|A Chain A, Structural Analysis Of The Lymphocyte-Specific Kinase Lck
In Complex With Non-Selective And Src Family Selective
Kinase Inhibitors
Length = 279
Score = 95.1 bits (235), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 84/269 (31%), Positives = 128/269 (47%), Gaps = 40/269 (14%)
Query: 94 ANKLGEGGFGPVYKGVLKKGDEIAVKRLPGRSGQGLREMKNEASVIAKVQHKNLVRLLGC 153
+LG G FG V+ G ++AVK L + EA+++ ++QH+ LVRL
Sbjct: 18 VERLGAGQFGEVWMGYYNGHTKVAVKSL-KQGSMSPDAFLAEANLMKQLQHQRLVRLYAV 76
Query: 154 CIDKDEKILIYEYMPNKSLDFFLFDP-----TKRMLLDWSA------------NYSSR-L 195
+ ++ +I EYM N SL FL P T LLD +A NY R L
Sbjct: 77 -VTQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERNYIHRDL 135
Query: 196 KVSNILLDKDINPKISDFGMARICGGNELQANTSRIVGTYGYMSPEYAIQGIFSIKSDVF 255
+ +NIL+ ++ KI+DFG+AR+ NE A + +PE G F+IKSDV+
Sbjct: 136 RAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKFPI-KWTAPEAINYGTFTIKSDVW 194
Query: 256 SFGVLLLEIVSGKKT--TGFYRTDSLTLLGYAWDLWTSNRTLELIDPILEDEYSSKHMLL 313
SFG+LL EIV+ + G + + L R ++ P ++ + L+
Sbjct: 195 SFGILLTEIVTHGRIPYPGMTNPEVIQNL---------ERGYRMVRP--DNCPEELYQLM 243
Query: 314 RYVNIALLCVQESADDRPTMNEVVSMLTD 342
R LC +E +DRPT + + S+L D
Sbjct: 244 R------LCWKERPEDRPTFDYLRSVLED 266
>pdb|3KMM|A Chain A, Structure Of Human Lck Kinase With A Small Molecule
Inhibitor
Length = 288
Score = 95.1 bits (235), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 84/269 (31%), Positives = 128/269 (47%), Gaps = 40/269 (14%)
Query: 94 ANKLGEGGFGPVYKGVLKKGDEIAVKRLPGRSGQGLREMKNEASVIAKVQHKNLVRLLGC 153
+LG G FG V+ G ++AVK L + EA+++ ++QH+ LVRL
Sbjct: 27 VERLGAGQFGEVWMGYYNGHTKVAVKSL-KQGSMSPDAFLAEANLMKQLQHQRLVRLYAV 85
Query: 154 CIDKDEKILIYEYMPNKSLDFFLFDP-----TKRMLLDWSA------------NYSSR-L 195
+ ++ +I EYM N SL FL P T LLD +A NY R L
Sbjct: 86 -VTQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERNYIHRDL 144
Query: 196 KVSNILLDKDINPKISDFGMARICGGNELQANTSRIVGTYGYMSPEYAIQGIFSIKSDVF 255
+ +NIL+ ++ KI+DFG+AR+ NE A + +PE G F+IKSDV+
Sbjct: 145 RAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKFPI-KWTAPEAINYGTFTIKSDVW 203
Query: 256 SFGVLLLEIVSGKKT--TGFYRTDSLTLLGYAWDLWTSNRTLELIDPILEDEYSSKHMLL 313
SFG+LL EIV+ + G + + L R ++ P ++ + L+
Sbjct: 204 SFGILLTEIVTHGRIPYPGMTNPEVIQNL---------ERGYRMVRP--DNCPEELYQLM 252
Query: 314 RYVNIALLCVQESADDRPTMNEVVSMLTD 342
R LC +E +DRPT + + S+L D
Sbjct: 253 R------LCWKERPEDRPTFDYLRSVLED 275
>pdb|2ZM1|A Chain A, Crystal Structure Of Imidazo Pyrazin 1 Bound To The Kinase
Domain Of Human Lck, (Auto-Phosphorylated On Tyr394)
pdb|2ZM4|A Chain A, Crystal Structure Of Imidazo Quinoxaline 1 Bound To The
Kinase Domain Of Human Lck, Activated Form (Auto-
Phosphorylated On Tyr394)
pdb|2ZYB|A Chain A, Crystal Structure Of Phenylimidazo Pyrazin 2 Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AC1|A Chain A, Crystal Structure Of Pyrazin Derivative Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AC2|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC3|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC4|A Chain A, Crystal Structure Of Triazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC5|A Chain A, Crystal Structure Of Triazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC8|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3ACJ|A Chain A, Crystal Structure Of Imidazo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3ACK|A Chain A, Crystal Structure Of Pyrrolo Pyrazine Derivative Bound To
The Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AD4|A Chain A, Crystal Structure Of Methoxy Benzofuran Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AD5|A Chain A, Crystal Structure Of Triazolone Derivative Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AD6|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
Length = 285
Score = 95.1 bits (235), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 84/267 (31%), Positives = 128/267 (47%), Gaps = 40/267 (14%)
Query: 96 KLGEGGFGPVYKGVLKKGDEIAVKRLPGRSGQGLREMKNEASVIAKVQHKNLVRLLGCCI 155
+LG G FG V+ G ++AVK L + EA+++ ++QH+ LVRL +
Sbjct: 26 RLGAGQFGEVWMGYYNGHTKVAVKSL-KQGSMSPDAFLAEANLMKQLQHQRLVRLYAV-V 83
Query: 156 DKDEKILIYEYMPNKSLDFFLFDP-----TKRMLLDWSA------------NYSSR-LKV 197
++ +I EYM N SL FL P T LLD +A NY R L+
Sbjct: 84 TQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERNYIHRDLRA 143
Query: 198 SNILLDKDINPKISDFGMARICGGNELQANTSRIVGTYGYMSPEYAIQGIFSIKSDVFSF 257
+NIL+ ++ KI+DFG+AR+ NE A + +PE G F+IKSDV+SF
Sbjct: 144 ANILVSDTLSCKIADFGLARLIEDNEXTAREGAKFPI-KWTAPEAINYGTFTIKSDVWSF 202
Query: 258 GVLLLEIVSGKKT--TGFYRTDSLTLLGYAWDLWTSNRTLELIDPILEDEYSSKHMLLRY 315
G+LL EIV+ + G + + L R ++ P ++ + L+R
Sbjct: 203 GILLTEIVTHGRIPYPGMTNPEVIQNL---------ERGYRMVRP--DNCPEELYQLMR- 250
Query: 316 VNIALLCVQESADDRPTMNEVVSMLTD 342
LC +E +DRPT + + S+L D
Sbjct: 251 -----LCWKERPEDRPTFDYLRSVLED 272
>pdb|2OF2|A Chain A, Crystal Structure Of Furanopyrimidine 8 Bound To Lck
pdb|2OF4|A Chain A, Crystal Structure Of Furanopyrimidine 1 Bound To Lck
Length = 271
Score = 95.1 bits (235), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 84/267 (31%), Positives = 128/267 (47%), Gaps = 40/267 (14%)
Query: 96 KLGEGGFGPVYKGVLKKGDEIAVKRLPGRSGQGLREMKNEASVIAKVQHKNLVRLLGCCI 155
+LG G FG V+ G ++AVK L + EA+++ ++QH+ LVRL +
Sbjct: 20 RLGAGQFGEVWMGYYNGHTKVAVKSL-KQGSMSPDAFLAEANLMKQLQHQRLVRLYAV-V 77
Query: 156 DKDEKILIYEYMPNKSLDFFLFDP-----TKRMLLDWSA------------NYSSR-LKV 197
++ +I EYM N SL FL P T LLD +A NY R L+
Sbjct: 78 TQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERNYIHRDLRA 137
Query: 198 SNILLDKDINPKISDFGMARICGGNELQANTSRIVGTYGYMSPEYAIQGIFSIKSDVFSF 257
+NIL+ ++ KI+DFG+AR+ NE A + +PE G F+IKSDV+SF
Sbjct: 138 ANILVSDTLSCKIADFGLARLIEDNEYTAREGAKFPI-KWTAPEAINYGTFTIKSDVWSF 196
Query: 258 GVLLLEIVSGKKT--TGFYRTDSLTLLGYAWDLWTSNRTLELIDPILEDEYSSKHMLLRY 315
G+LL EIV+ + G + + L R ++ P ++ + L+R
Sbjct: 197 GILLTEIVTHGRIPYPGMTNPEVIQNL---------ERGYRMVRP--DNCPEELYQLMR- 244
Query: 316 VNIALLCVQESADDRPTMNEVVSMLTD 342
LC +E +DRPT + + S+L D
Sbjct: 245 -----LCWKERPEDRPTFDYLRSVLED 266
>pdb|3LCK|A Chain A, The Kinase Domain Of Human Lymphocyte Kinase (Lck),
Activated Form (Auto-Phosphorylated On Tyr394)
pdb|3BYO|A Chain A, X-Ray Co-Crystal Structure Of 2-Amino-6-Phenylpyrimido[5',
4':5,6]pyrimido[1,2-A]benzimidazol-5(6h)-One 25 Bound To
Lck
Length = 271
Score = 94.7 bits (234), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 84/267 (31%), Positives = 128/267 (47%), Gaps = 40/267 (14%)
Query: 96 KLGEGGFGPVYKGVLKKGDEIAVKRLPGRSGQGLREMKNEASVIAKVQHKNLVRLLGCCI 155
+LG G FG V+ G ++AVK L + EA+++ ++QH+ LVRL +
Sbjct: 20 RLGAGQFGEVWMGYYNGHTKVAVKSL-KQGSMSPDAFLAEANLMKQLQHQRLVRLYAV-V 77
Query: 156 DKDEKILIYEYMPNKSLDFFLFDP-----TKRMLLDWSA------------NYSSR-LKV 197
++ +I EYM N SL FL P T LLD +A NY R L+
Sbjct: 78 TQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERNYIHRDLRA 137
Query: 198 SNILLDKDINPKISDFGMARICGGNELQANTSRIVGTYGYMSPEYAIQGIFSIKSDVFSF 257
+NIL+ ++ KI+DFG+AR+ NE A + +PE G F+IKSDV+SF
Sbjct: 138 ANILVSDTLSCKIADFGLARLIEDNEXTAREGAKFPI-KWTAPEAINYGTFTIKSDVWSF 196
Query: 258 GVLLLEIVSGKKT--TGFYRTDSLTLLGYAWDLWTSNRTLELIDPILEDEYSSKHMLLRY 315
G+LL EIV+ + G + + L R ++ P ++ + L+R
Sbjct: 197 GILLTEIVTHGRIPYPGMTNPEVIQNL---------ERGYRMVRP--DNCPEELYQLMR- 244
Query: 316 VNIALLCVQESADDRPTMNEVVSMLTD 342
LC +E +DRPT + + S+L D
Sbjct: 245 -----LCWKERPEDRPTFDYLRSVLED 266
>pdb|3MPM|A Chain A, Lck Complexed With A Pyrazolopyrimidine
Length = 267
Score = 94.7 bits (234), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 84/267 (31%), Positives = 128/267 (47%), Gaps = 40/267 (14%)
Query: 96 KLGEGGFGPVYKGVLKKGDEIAVKRLPGRSGQGLREMKNEASVIAKVQHKNLVRLLGCCI 155
+LG G FG V+ G ++AVK L + EA+++ ++QH+ LVRL +
Sbjct: 16 RLGAGQFGEVWMGYYNGHTKVAVKSL-KQGSMSPDAFLAEANLMKQLQHQRLVRLYAV-V 73
Query: 156 DKDEKILIYEYMPNKSLDFFLFDP-----TKRMLLDWSA------------NYSSR-LKV 197
++ +I EYM N SL FL P T LLD +A NY R L+
Sbjct: 74 TQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERNYIHRNLRA 133
Query: 198 SNILLDKDINPKISDFGMARICGGNELQANTSRIVGTYGYMSPEYAIQGIFSIKSDVFSF 257
+NIL+ ++ KI+DFG+AR+ NE A + +PE G F+IKSDV+SF
Sbjct: 134 ANILVSDTLSCKIADFGLARLIEDNEYTAREGAKFPI-KWTAPEAINYGTFTIKSDVWSF 192
Query: 258 GVLLLEIVSGKKT--TGFYRTDSLTLLGYAWDLWTSNRTLELIDPILEDEYSSKHMLLRY 315
G+LL EIV+ + G + + L R ++ P ++ + L+R
Sbjct: 193 GILLTEIVTHGRIPYPGMTNPEVIQNL---------ERGYRMVRP--DNCPEELYQLMR- 240
Query: 316 VNIALLCVQESADDRPTMNEVVSMLTD 342
LC +E +DRPT + + S+L D
Sbjct: 241 -----LCWKERPEDRPTFDYLRSVLED 262
>pdb|2OG8|A Chain A, Crystal Structure Of Aminoquinazoline 36 Bound To Lck
pdb|2OG8|B Chain B, Crystal Structure Of Aminoquinazoline 36 Bound To Lck
Length = 265
Score = 94.7 bits (234), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 84/267 (31%), Positives = 128/267 (47%), Gaps = 40/267 (14%)
Query: 96 KLGEGGFGPVYKGVLKKGDEIAVKRLPGRSGQGLREMKNEASVIAKVQHKNLVRLLGCCI 155
+LG G FG V+ G ++AVK L + EA+++ ++QH+ LVRL +
Sbjct: 15 RLGAGQFGEVWMGYYNGHTKVAVKSL-KQGSMSPDAFLAEANLMKQLQHQRLVRLYAV-V 72
Query: 156 DKDEKILIYEYMPNKSLDFFLFDP-----TKRMLLDWSA------------NYSSR-LKV 197
++ +I EYM N SL FL P T LLD +A NY R L+
Sbjct: 73 TQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERNYIHRDLRA 132
Query: 198 SNILLDKDINPKISDFGMARICGGNELQANTSRIVGTYGYMSPEYAIQGIFSIKSDVFSF 257
+NIL+ ++ KI+DFG+AR+ NE A + +PE G F+IKSDV+SF
Sbjct: 133 ANILVSDTLSCKIADFGLARLIEDNEYTAREGAKFPI-KWTAPEAINYGTFTIKSDVWSF 191
Query: 258 GVLLLEIVSGKKT--TGFYRTDSLTLLGYAWDLWTSNRTLELIDPILEDEYSSKHMLLRY 315
G+LL EIV+ + G + + L R ++ P ++ + L+R
Sbjct: 192 GILLTEIVTHGRIPYPGMTNPEVIQNL---------ERGYRMVRP--DNCPEELYQLMR- 239
Query: 316 VNIALLCVQESADDRPTMNEVVSMLTD 342
LC +E +DRPT + + S+L D
Sbjct: 240 -----LCWKERPEDRPTFDYLRSVLED 261
>pdb|2DQ7|X Chain X, Crystal Structure Of Fyn Kinase Domain Complexed With
Staurosporine
Length = 283
Score = 90.1 bits (222), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 85/281 (30%), Positives = 131/281 (46%), Gaps = 44/281 (15%)
Query: 96 KLGEGGFGPVYKGVLKKGDEIAVKRL-PG-RSGQGLREMKNEASVIAKVQHKNLVRLLGC 153
+LG G FG V+ G ++A+K L PG S + E EA ++ K++H LV+L
Sbjct: 16 RLGNGQFGEVWMGTWNGNTKVAIKTLKPGTMSPESFLE---EAQIMKKLKHDKLVQLYAV 72
Query: 154 CIDKDEKILIYEYMPNKSLDFFLFDPTKRML-----LDWSA------------NYSSR-L 195
+ ++ ++ EYM SL FL D R L +D +A NY R L
Sbjct: 73 -VSEEPIYIVTEYMNKGSLLDFLKDGEGRALKLPNLVDMAAQVAAGMAYIERMNYIHRDL 131
Query: 196 KVSNILLDKDINPKISDFGMARICGGNELQANTSRIVGTYGYMSPEYAIQGIFSIKSDVF 255
+ +NIL+ + KI+DFG+AR+ NE A + +PE A+ G F+IKSDV+
Sbjct: 132 RSANILVGNGLICKIADFGLARLIEDNEXTARQGAKF-PIKWTAPEAALYGRFTIKSDVW 190
Query: 256 SFGVLLLEIVSGKKT--TGFYRTDSLTLLGYAWDLWTSNRTLELIDPILEDEYSSKHMLL 313
SFG+LL E+V+ + G + L + + + P +D S H L+
Sbjct: 191 SFGILLTELVTKGRVPYPGMNNREVLEQVERGYRM-----------PCPQDCPISLHELM 239
Query: 314 RYVNIALLCVQESADDRPTMNEVVSMLTDEAAALFPPKQPA 354
+ C ++ ++RPT + S L D A P QP
Sbjct: 240 ------IHCWKKDPEERPTFEYLQSFLEDYFTATEPQYQPG 274
>pdb|1QPD|A Chain A, Structural Analysis Of The Lymphocyte-specific Kinase Lck
In Complex With Non-selective And Src Family Selective
Kinase Inhibitors
Length = 279
Score = 89.0 bits (219), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 82/268 (30%), Positives = 126/268 (47%), Gaps = 40/268 (14%)
Query: 95 NKLGEGGFGPVYKGVLKKGDEIAVKRLPGRSGQGLREMKNEASVIAKVQHKNLVRLLGCC 154
+LG G G V+ G ++AVK L + EA+++ ++QH+ LVRL
Sbjct: 19 ERLGAGQAGEVWMGYYNGHTKVAVKSL-KQGSMSPDAFLAEANLMKQLQHQRLVRLYAV- 76
Query: 155 IDKDEKILIYEYMPNKSLDFFLFDP-----TKRMLLDWSA------------NYSSR-LK 196
+ ++ +I EYM N SL FL P T LLD +A NY R L+
Sbjct: 77 VTQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERNYIHRDLR 136
Query: 197 VSNILLDKDINPKISDFGMARICGGNELQANTSRIVGTYGYMSPEYAIQGIFSIKSDVFS 256
+NIL+ ++ KI+DFG+AR+ E A + +PE G F+IKSDV+S
Sbjct: 137 AANILVSDTLSCKIADFGLARLIEDAEXTAREGAKFPI-KWTAPEAINYGTFTIKSDVWS 195
Query: 257 FGVLLLEIVSGKKT--TGFYRTDSLTLLGYAWDLWTSNRTLELIDPILEDEYSSKHMLLR 314
FG+LL EIV+ + G + + L R ++ P ++ + L+R
Sbjct: 196 FGILLTEIVTHGRIPYPGMTNPEVIQNL---------ERGYRMVRP--DNCPEELYQLMR 244
Query: 315 YVNIALLCVQESADDRPTMNEVVSMLTD 342
LC +E +DRPT + + S+L D
Sbjct: 245 ------LCWKERPEDRPTFDYLRSVLED 266
>pdb|1FMK|A Chain A, Crystal Structure Of Human Tyrosine-Protein Kinase C-Src
pdb|2SRC|A Chain A, Crystal Structure Of Human Tyrosine-protein Kinase C-src,
In Complex With Amp-pnp
Length = 452
Score = 88.6 bits (218), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 79/280 (28%), Positives = 128/280 (45%), Gaps = 42/280 (15%)
Query: 96 KLGEGGFGPVYKGVLKKGDEIAVKRL-PGRSGQGLREMKNEASVIAKVQHKNLVRLLGCC 154
KLG+G FG V+ G +A+K L PG EA V+ K++H+ LV+L
Sbjct: 191 KLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSP--EAFLQEAQVMKKLRHEKLVQLYAV- 247
Query: 155 IDKDEKILIYEYMPNKSLDFFLFDPTKR-----MLLDWSA------------NYSSR-LK 196
+ ++ ++ EYM SL FL T + L+D +A NY R L+
Sbjct: 248 VSEEPIYIVTEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVERMNYVHRDLR 307
Query: 197 VSNILLDKDINPKISDFGMARICGGNELQANTSRIVGTYGYMSPEYAIQGIFSIKSDVFS 256
+NIL+ +++ K++DFG+AR+ NE A + +PE A+ G F+IKSDV+S
Sbjct: 308 AANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPI-KWTAPEAALYGRFTIKSDVWS 366
Query: 257 FGVLLLEIVSGKKT--TGFYRTDSLTLLGYAWDLWTSNRTLELIDPILEDEYSSKHMLLR 314
FG+LL E+ + + G + L + + + P + S H L+
Sbjct: 367 FGILLTELTTKGRVPYPGMVNREVLDQVERGYRM-----------PCPPECPESLHDLM- 414
Query: 315 YVNIALLCVQESADDRPTMNEVVSMLTDEAAALFPPKQPA 354
C ++ ++RPT + + L D + P QP
Sbjct: 415 -----CQCWRKEPEERPTFEYLQAFLEDYFTSTEPQXQPG 449
>pdb|2H8H|A Chain A, Src Kinase In Complex With A Quinazoline Inhibitor
Length = 535
Score = 88.2 bits (217), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 79/280 (28%), Positives = 128/280 (45%), Gaps = 42/280 (15%)
Query: 96 KLGEGGFGPVYKGVLKKGDEIAVKRL-PGRSGQGLREMKNEASVIAKVQHKNLVRLLGCC 154
KLG+G FG V+ G +A+K L PG EA V+ K++H+ LV+L
Sbjct: 274 KLGQGCFGEVWMGTWNGTTRVAIKTLKPGT--MSPEAFLQEAQVMKKLRHEKLVQLY-AV 330
Query: 155 IDKDEKILIYEYMPNKSLDFFLFDPTKR-----MLLDWSA------------NYSSR-LK 196
+ ++ ++ EYM SL FL T + L+D +A NY R L+
Sbjct: 331 VSEEPIYIVTEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVERMNYVHRDLR 390
Query: 197 VSNILLDKDINPKISDFGMARICGGNELQANTSRIVGTYGYMSPEYAIQGIFSIKSDVFS 256
+NIL+ +++ K++DFG+AR+ NE A + +PE A+ G F+IKSDV+S
Sbjct: 391 AANILVGENLVCKVADFGLARLIEDNEYTARQGAKF-PIKWTAPEAALYGRFTIKSDVWS 449
Query: 257 FGVLLLEIVSGKKT--TGFYRTDSLTLLGYAWDLWTSNRTLELIDPILEDEYSSKHMLLR 314
FG+LL E+ + + G + L + + + P + S H L+
Sbjct: 450 FGILLTELTTKGRVPYPGMVNREVLDQVERGYRM-----------PCPPECPESLHDLM- 497
Query: 315 YVNIALLCVQESADDRPTMNEVVSMLTDEAAALFPPKQPA 354
C ++ ++RPT + + L D + P QP
Sbjct: 498 -----CQCWRKEPEERPTFEYLQAFLEDYFTSTEPQXQPG 532
>pdb|1QCF|A Chain A, Crystal Structure Of Hck In Complex With A Src Family-
Selective Tyrosine Kinase Inhibitor
pdb|2C0I|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-420983
pdb|2C0I|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-420983
pdb|2C0O|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-770041
pdb|2C0O|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-770041
pdb|2C0T|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-641359
pdb|2C0T|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-641359
Length = 454
Score = 88.2 bits (217), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 95/341 (27%), Positives = 149/341 (43%), Gaps = 59/341 (17%)
Query: 26 FYCARRKPRSRGEDLMTLDLDLNLKANN---VNIELPVNSKQTKRSKKKEVDQLPLFSFS 82
FY + PRS L L +D K N+ + +P S + ++ +K+ ++P S
Sbjct: 136 FYIS---PRSTFSTLQEL-VDHYKKGNDGLCQKLSVPCMSSKPQKPWEKDAWEIPRESLK 191
Query: 83 SVSTATNKFSDANKLGEGGFGPVYKGVLKKGDEIAVKRL-PGRSGQGLREMKNEASVIAK 141
KLG G FG V+ K ++AVK + PG + EA+V+
Sbjct: 192 L----------EKKLGAGQFGEVWMATYNKHTKVAVKTMKPG--SMSVEAFLAEANVMKT 239
Query: 142 VQHKNLVRLLGCCIDKDEKILIYEYMPNKSL-DFFLFDPTKRM----LLDWSA------- 189
+QH LV+L + K+ +I E+M SL DF D + L+D+SA
Sbjct: 240 LQHDKLVKL-HAVVTKEPIYIITEFMAKGSLLDFLKSDEGSKQPLPKLIDFSAQIAEGMA 298
Query: 190 -----NYSSR-LKVSNILLDKDINPKISDFGMARICGGNELQANTSRIVGTYGYMSPEYA 243
NY R L+ +NIL+ + KI+DFG+AR+ NE A + +PE
Sbjct: 299 FIEQRNYIHRDLRAANILVSASLVCKIADFGLARVIEDNEYTAREGAKFPI-KWTAPEAI 357
Query: 244 IQGIFSIKSDVFSFGVLLLEIVSGKKT--TGFYRTDSLTLLGYAWDLWTSNRTLELIDPI 301
G F+IKSDV+SFG+LL+EIV+ + G + + L + + E +
Sbjct: 358 NFGSFTIKSDVWSFGILLMEIVTYGRIPYPGMSNPEVIRALERGYRMPRPENCPEEL--- 414
Query: 302 LEDEYSSKHMLLRYVNIALLCVQESADDRPTMNEVVSMLTD 342
NI + C + ++RPT + S+L D
Sbjct: 415 --------------YNIMMRCWKNRPEERPTFEYIQSVLDD 441
>pdb|1Y57|A Chain A, Structure Of Unphosphorylated C-Src In Complex With An
Inhibitor
Length = 452
Score = 87.8 bits (216), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 79/280 (28%), Positives = 128/280 (45%), Gaps = 42/280 (15%)
Query: 96 KLGEGGFGPVYKGVLKKGDEIAVKRL-PGRSGQGLREMKNEASVIAKVQHKNLVRLLGCC 154
KLG+G FG V+ G +A+K L PG EA V+ K++H+ LV+L
Sbjct: 191 KLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSP--EAFLQEAQVMKKLRHEKLVQLYAV- 247
Query: 155 IDKDEKILIYEYMPNKSLDFFLFDPTKR-----MLLDWSA------------NYSSR-LK 196
+ ++ ++ EYM SL FL T + L+D +A NY R L+
Sbjct: 248 VSEEPIYIVTEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVERMNYVHRDLR 307
Query: 197 VSNILLDKDINPKISDFGMARICGGNELQANTSRIVGTYGYMSPEYAIQGIFSIKSDVFS 256
+NIL+ +++ K++DFG+AR+ NE A + +PE A+ G F+IKSDV+S
Sbjct: 308 AANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPI-KWTAPEAALYGRFTIKSDVWS 366
Query: 257 FGVLLLEIVSGKKT--TGFYRTDSLTLLGYAWDLWTSNRTLELIDPILEDEYSSKHMLLR 314
FG+LL E+ + + G + L + + + P + S H L+
Sbjct: 367 FGILLTELTTKGRVPYPGMVNREVLDQVERGYRM-----------PCPPECPESLHDLM- 414
Query: 315 YVNIALLCVQESADDRPTMNEVVSMLTDEAAALFPPKQPA 354
C ++ ++RPT + + L D + P QP
Sbjct: 415 -----CQCWRKEPEERPTFEYLQAFLEDYFTSTEPQYQPG 449
>pdb|2HK5|A Chain A, Hck Kinase In Complex With Lck Targetted Inhibitor Pg-
1009247
Length = 270
Score = 87.8 bits (216), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 81/266 (30%), Positives = 124/266 (46%), Gaps = 38/266 (14%)
Query: 96 KLGEGGFGPVYKGVLKKGDEIAVKRL-PGRSGQGLREMKNEASVIAKVQHKNLVRLLGCC 154
KLG G FG V+ K ++AVK + PG + EA+V+ +QH LV+L
Sbjct: 22 KLGAGQFGEVWMATYNKHTKVAVKTMKPG--SMSVEAFLAEANVMKTLQHDKLVKL-HAV 78
Query: 155 IDKDEKILIYEYMPNKSL-DFFLFDPTKRM----LLDWSA------------NYSSR-LK 196
+ K+ +I E+M SL DF D + L+D+SA NY R L+
Sbjct: 79 VTKEPIYIITEFMAKGSLLDFLKSDEGSKQPLPKLIDFSAQIAEGMAFIEQRNYIHRDLR 138
Query: 197 VSNILLDKDINPKISDFGMARICGGNELQANTSRIVGTYGYMSPEYAIQGIFSIKSDVFS 256
+NIL+ + KI+DFG+AR+ NE A + +PE G F+IKSDV+S
Sbjct: 139 AANILVSASLVCKIADFGLARVIEDNEYTAREGAKFPI-KWTAPEAINFGSFTIKSDVWS 197
Query: 257 FGVLLLEIVSGKKTTGFYRTDSLTLLGYAWDLWTSNRTLELIDPILEDEYSSKHMLLRYV 316
FG+LL+EIV+ + ++ + R LE + E + +
Sbjct: 198 FGILLMEIVTYGRIPYPGMSNPEVI-----------RALERGYRMPRPENCPEELY---- 242
Query: 317 NIALLCVQESADDRPTMNEVVSMLTD 342
NI + C + ++RPT + S+L D
Sbjct: 243 NIMMRCWKNRPEERPTFEYIQSVLDD 268
>pdb|1KSW|A Chain A, Structure Of Human C-Src Tyrosine Kinase (Thr338gly
Mutant) In Complex With N6-Benzyl Adp
Length = 452
Score = 87.4 bits (215), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 79/280 (28%), Positives = 128/280 (45%), Gaps = 42/280 (15%)
Query: 96 KLGEGGFGPVYKGVLKKGDEIAVKRL-PGRSGQGLREMKNEASVIAKVQHKNLVRLLGCC 154
KLG+G FG V+ G +A+K L PG EA V+ K++H+ LV+L
Sbjct: 191 KLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSP--EAFLQEAQVMKKLRHEKLVQLYAV- 247
Query: 155 IDKDEKILIYEYMPNKSLDFFLFDPTKR-----MLLDWSA------------NYSSR-LK 196
+ ++ ++ EYM SL FL T + L+D +A NY R L+
Sbjct: 248 VSEEPIYIVGEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVERMNYVHRDLR 307
Query: 197 VSNILLDKDINPKISDFGMARICGGNELQANTSRIVGTYGYMSPEYAIQGIFSIKSDVFS 256
+NIL+ +++ K++DFG+AR+ NE A + +PE A+ G F+IKSDV+S
Sbjct: 308 AANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPI-KWTAPEAALYGRFTIKSDVWS 366
Query: 257 FGVLLLEIVSGKKT--TGFYRTDSLTLLGYAWDLWTSNRTLELIDPILEDEYSSKHMLLR 314
FG+LL E+ + + G + L + + + P + S H L+
Sbjct: 367 FGILLTELTTKGRVPYPGMVNREVLDQVERGYRM-----------PCPPECPESLHDLM- 414
Query: 315 YVNIALLCVQESADDRPTMNEVVSMLTDEAAALFPPKQPA 354
C ++ ++RPT + + L D + P QP
Sbjct: 415 -----CQCWRKEPEERPTFEYLQAFLEDYFTSTEPQXQPG 449
>pdb|1YOJ|A Chain A, Crystal Structure Of Src Kinase Domain
pdb|1YOJ|B Chain B, Crystal Structure Of Src Kinase Domain
pdb|1YOM|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Purvalanol A
pdb|1YOM|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Purvalanol A
Length = 283
Score = 87.4 bits (215), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 80/280 (28%), Positives = 128/280 (45%), Gaps = 42/280 (15%)
Query: 96 KLGEGGFGPVYKGVLKKGDEIAVKRL-PGRSGQGLREMKNEASVIAKVQHKNLVRLLGCC 154
KLG+G FG V+ G +A+K L PG EA V+ K++H+ LV+L
Sbjct: 22 KLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSP--EAFLQEAQVMKKLRHEKLVQLYAV- 78
Query: 155 IDKDEKILIYEYMPNKSLDFFLFDPTKR-----MLLDWSA------------NYSSR-LK 196
+ ++ ++ EYM SL FL T + L+D SA NY R L+
Sbjct: 79 VSEEPIYIVTEYMNKGSLLDFLKGETGKYLRLPQLVDMSAQIASGMAYVERMNYVHRDLR 138
Query: 197 VSNILLDKDINPKISDFGMARICGGNELQANTSRIVGTYGYMSPEYAIQGIFSIKSDVFS 256
+NIL+ +++ K++DFG+AR+ NE A + +PE A+ G F+IKSDV+S
Sbjct: 139 AANILVGENLVCKVADFGLARLIEDNEWTARQGAKF-PIKWTAPEAALYGRFTIKSDVWS 197
Query: 257 FGVLLLEIVSGKKT--TGFYRTDSLTLLGYAWDLWTSNRTLELIDPILEDEYSSKHMLLR 314
FG+LL E+ + + G + L + + + P + S H L+
Sbjct: 198 FGILLTELTTKGRVPYPGMVNREVLDQVERGYRM-----------PCPPECPESLHDLM- 245
Query: 315 YVNIALLCVQESADDRPTMNEVVSMLTDEAAALFPPKQPA 354
C ++ ++RPT + + L D + P QP
Sbjct: 246 -----CQCWRKEPEERPTFEYLQAFLEDYFTSTEPQYQPG 280
>pdb|1YOL|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Cgp77675
pdb|1YOL|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Cgp77675
Length = 283
Score = 87.4 bits (215), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 80/280 (28%), Positives = 128/280 (45%), Gaps = 42/280 (15%)
Query: 96 KLGEGGFGPVYKGVLKKGDEIAVKRL-PGRSGQGLREMKNEASVIAKVQHKNLVRLLGCC 154
KLG+G FG V+ G +A+K L PG EA V+ K++H+ LV+L
Sbjct: 22 KLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSP--EAFLQEAQVMKKLRHEKLVQLYAV- 78
Query: 155 IDKDEKILIYEYMPNKSLDFFLFDPTKR-----MLLDWSA------------NYSSR-LK 196
+ ++ ++ EYM SL FL T + L+D SA NY R L+
Sbjct: 79 VSEEPIYIVTEYMNKGSLLDFLKGETGKYLRLPQLVDMSAQIASGMAYVERMNYVHRDLR 138
Query: 197 VSNILLDKDINPKISDFGMARICGGNELQANTSRIVGTYGYMSPEYAIQGIFSIKSDVFS 256
+NIL+ +++ K++DFG+AR+ NE A + +PE A+ G F+IKSDV+S
Sbjct: 139 AANILVGENLVCKVADFGLARLIEDNEYTARQGAKF-PIKWTAPEAALYGRFTIKSDVWS 197
Query: 257 FGVLLLEIVSGKKT--TGFYRTDSLTLLGYAWDLWTSNRTLELIDPILEDEYSSKHMLLR 314
FG+LL E+ + + G + L + + + P + S H L+
Sbjct: 198 FGILLTELTTKGRVPYPGMVNREVLDQVERGYRM-----------PCPPECPESLHDLM- 245
Query: 315 YVNIALLCVQESADDRPTMNEVVSMLTDEAAALFPPKQPA 354
C ++ ++RPT + + L D + P QP
Sbjct: 246 -----CQCWRKEPEERPTFEYLQAFLEDYFTSTEPQYQPG 280
>pdb|2BDF|A Chain A, Src Kinase In Complex With Inhibitor Ap23451
pdb|2BDF|B Chain B, Src Kinase In Complex With Inhibitor Ap23451
pdb|2BDJ|A Chain A, Src Kinase In Complex With Inhibitor Ap23464
Length = 279
Score = 86.7 bits (213), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 78/280 (27%), Positives = 128/280 (45%), Gaps = 42/280 (15%)
Query: 96 KLGEGGFGPVYKGVLKKGDEIAVKRL-PGRSGQGLREMKNEASVIAKVQHKNLVRLLGCC 154
KLG+G FG V+ G +A+K L PG EA V+ K++H+ LV+L
Sbjct: 18 KLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSP--EAFLQEAQVMKKLRHEKLVQLYAV- 74
Query: 155 IDKDEKILIYEYMPNKSLDFFLFDPTKR-----MLLDWSA------------NYSSR-LK 196
+ ++ ++ EYM SL FL T + L+D +A NY R L+
Sbjct: 75 VSEEPIYIVTEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVERMNYVHRDLR 134
Query: 197 VSNILLDKDINPKISDFGMARICGGNELQANTSRIVGTYGYMSPEYAIQGIFSIKSDVFS 256
+NIL+ +++ K++DFG+AR+ NE A + +PE A+ G F+IKSDV+S
Sbjct: 135 AANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPI-KWTAPEAALYGRFTIKSDVWS 193
Query: 257 FGVLLLEIVSGKKT--TGFYRTDSLTLLGYAWDLWTSNRTLELIDPILEDEYSSKHMLLR 314
FG+LL E+ + + G + L + + + P + S H
Sbjct: 194 FGILLTELTTKGRVPYPGMVNREVLDQVERGYRM-----------PCPPECPESLH---- 238
Query: 315 YVNIALLCVQESADDRPTMNEVVSMLTDEAAALFPPKQPA 354
++ C ++ ++RPT + + L D + P QP
Sbjct: 239 --DLMCQCWRKEPEERPTFEYLQAFLEDYFTSTEPQYQPG 276
>pdb|1YI6|A Chain A, C-Term Tail Segment Of Human Tyrosine Kinase (258-533)
pdb|1YI6|B Chain B, C-Term Tail Segment Of Human Tyrosine Kinase (258-533)
Length = 276
Score = 86.7 bits (213), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 79/280 (28%), Positives = 128/280 (45%), Gaps = 42/280 (15%)
Query: 96 KLGEGGFGPVYKGVLKKGDEIAVKRL-PGRSGQGLREMKNEASVIAKVQHKNLVRLLGCC 154
KLG+G FG V+ G +A+K L PG EA V+ K++H+ LV+L
Sbjct: 15 KLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSP--EAFLQEAQVMKKLRHEKLVQLYAV- 71
Query: 155 IDKDEKILIYEYMPNKSLDFFLFDPTKR-----MLLDWSA------------NYSSR-LK 196
+ ++ ++ EYM SL FL T + L+D +A NY R L+
Sbjct: 72 VSEEPIXIVTEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVERMNYVHRDLR 131
Query: 197 VSNILLDKDINPKISDFGMARICGGNELQANTSRIVGTYGYMSPEYAIQGIFSIKSDVFS 256
+NIL+ +++ K++DFG+AR+ NE A + +PE A+ G F+IKSDV+S
Sbjct: 132 AANILVGENLVCKVADFGLARLIEDNEXTARQGAKF-PIKWTAPEAALYGRFTIKSDVWS 190
Query: 257 FGVLLLEIVSGKKT--TGFYRTDSLTLLGYAWDLWTSNRTLELIDPILEDEYSSKHMLLR 314
FG+LL E+ + + G + L + + + P + S H L+
Sbjct: 191 FGILLTELTTKGRVPYPGMVNREVLDQVERGYRM-----------PCPPECPESLHDLM- 238
Query: 315 YVNIALLCVQESADDRPTMNEVVSMLTDEAAALFPPKQPA 354
C ++ ++RPT + + L D + P QP
Sbjct: 239 -----CQCWRKEPEERPTFEYLQAFLEDYFTSTEPQYQPG 273
>pdb|3OEZ|A Chain A, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain Complexed With Imatinib
pdb|3OEZ|B Chain B, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain Complexed With Imatinib
pdb|3OF0|A Chain A, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain
pdb|3OF0|B Chain B, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain
pdb|3QLF|A Chain A, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Pyrazolopyrimidine
5
pdb|3QLF|B Chain B, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Pyrazolopyrimidine
5
pdb|3QLG|A Chain A, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Dasatinib
pdb|3QLG|B Chain B, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Dasatinib
Length = 286
Score = 85.5 bits (210), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 78/280 (27%), Positives = 129/280 (46%), Gaps = 42/280 (15%)
Query: 96 KLGEGGFGPVYKGVLKKGDEIAVKRL-PGRSGQGLREMKNEASVIAKVQHKNLVRLLGCC 154
KLG+G FG V+ G +A+K L PG EA V+ K++H+ LV+L
Sbjct: 25 KLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSP--EAFLQEAQVMKKIRHEKLVQLYAV- 81
Query: 155 IDKDEKILIYEYMPNKSL-DFFLFDPTKRM----LLDWSA------------NYSSR-LK 196
+ ++ ++ EYM SL DF + K + L+D +A NY R L+
Sbjct: 82 VSEEPIYIVTEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVERMNYVHRDLR 141
Query: 197 VSNILLDKDINPKISDFGMARICGGNELQANTSRIVGTYGYMSPEYAIQGIFSIKSDVFS 256
+NIL+ +++ K++DFG+AR+ NE A + +PE A+ G F+IKSDV+S
Sbjct: 142 AANILVGENLVCKVADFGLARLIEDNEYTARQGAKF-PIKWTAPEAALYGRFTIKSDVWS 200
Query: 257 FGVLLLEIVSGKKT--TGFYRTDSLTLLGYAWDLWTSNRTLELIDPILEDEYSSKHMLLR 314
FG+LL E+ + + G + L + + + P + S H
Sbjct: 201 FGILLTELTTKGRVPYPGMVNREVLDQVERGYRM-----------PCPPECPESLH---- 245
Query: 315 YVNIALLCVQESADDRPTMNEVVSMLTDEAAALFPPKQPA 354
++ C ++ ++RPT + + L D + P QP
Sbjct: 246 --DLMCQCWRKDPEERPTFEYLQAFLEDYFTSTEPQYQPG 283
>pdb|3DQW|A Chain A, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|B Chain B, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|C Chain C, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|D Chain D, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
Length = 286
Score = 85.1 bits (209), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 78/280 (27%), Positives = 129/280 (46%), Gaps = 42/280 (15%)
Query: 96 KLGEGGFGPVYKGVLKKGDEIAVKRL-PGRSGQGLREMKNEASVIAKVQHKNLVRLLGCC 154
KLG+G FG V+ G +A+K L PG EA V+ K++H+ LV+L
Sbjct: 25 KLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSP--EAFLQEAQVMKKLRHEKLVQLYAV- 81
Query: 155 IDKDEKILIYEYMPNKSL-DFFLFDPTKRM----LLDWSA------------NYSSR-LK 196
+ ++ ++ EYM SL DF + K + L+D +A NY R L+
Sbjct: 82 VSEEPIYIVIEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVERMNYVHRDLR 141
Query: 197 VSNILLDKDINPKISDFGMARICGGNELQANTSRIVGTYGYMSPEYAIQGIFSIKSDVFS 256
+NIL+ +++ K++DFG+AR+ NE A + +PE A+ G F+IKSDV+S
Sbjct: 142 AANILVGENLVCKVADFGLARLIEDNEXTARQGAKF-PIKWTAPEAALYGRFTIKSDVWS 200
Query: 257 FGVLLLEIVSGKKT--TGFYRTDSLTLLGYAWDLWTSNRTLELIDPILEDEYSSKHMLLR 314
FG+LL E+ + + G + L + + + P + S H
Sbjct: 201 FGILLTELTTKGRVPYPGMVNREVLDQVERGYRM-----------PCPPECPESLH---- 245
Query: 315 YVNIALLCVQESADDRPTMNEVVSMLTDEAAALFPPKQPA 354
++ C ++ ++RPT + + L D + P QP
Sbjct: 246 --DLMCQCWRKDPEERPTFEYLQAFLEDYFTSTEPQYQPG 283
>pdb|3G6H|A Chain A, Src Thr338ile Inhibited In The Dfg-Asp-Out Conformation
pdb|3G6H|B Chain B, Src Thr338ile Inhibited In The Dfg-Asp-Out Conformation
Length = 286
Score = 85.1 bits (209), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 78/280 (27%), Positives = 129/280 (46%), Gaps = 42/280 (15%)
Query: 96 KLGEGGFGPVYKGVLKKGDEIAVKRL-PGRSGQGLREMKNEASVIAKVQHKNLVRLLGCC 154
KLG+G FG V+ G +A+K L PG EA V+ K++H+ LV+L
Sbjct: 25 KLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSP--EAFLQEAQVMKKLRHEKLVQLYAV- 81
Query: 155 IDKDEKILIYEYMPNKSL-DFFLFDPTKRM----LLDWSA------------NYSSR-LK 196
+ ++ ++ EYM SL DF + K + L+D +A NY R L+
Sbjct: 82 VSEEPIYIVIEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVERMNYVHRDLR 141
Query: 197 VSNILLDKDINPKISDFGMARICGGNELQANTSRIVGTYGYMSPEYAIQGIFSIKSDVFS 256
+NIL+ +++ K++DFG+AR+ NE A + +PE A+ G F+IKSDV+S
Sbjct: 142 AANILVGENLVCKVADFGLARLIEDNEYTARQGAKF-PIKWTAPEAALYGRFTIKSDVWS 200
Query: 257 FGVLLLEIVSGKKT--TGFYRTDSLTLLGYAWDLWTSNRTLELIDPILEDEYSSKHMLLR 314
FG+LL E+ + + G + L + + + P + S H
Sbjct: 201 FGILLTELTTKGRVPYPGMVNREVLDQVERGYRM-----------PCPPECPESLH---- 245
Query: 315 YVNIALLCVQESADDRPTMNEVVSMLTDEAAALFPPKQPA 354
++ C ++ ++RPT + + L D + P QP
Sbjct: 246 --DLMCQCWRKDPEERPTFEYLQAFLEDYFTSTEPQYQPG 283
>pdb|2PTK|A Chain A, Chicken Src Tyrosine Kinase
Length = 453
Score = 85.1 bits (209), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 78/280 (27%), Positives = 128/280 (45%), Gaps = 42/280 (15%)
Query: 96 KLGEGGFGPVYKGVLKKGDEIAVKRL-PGRSGQGLREMKNEASVIAKVQHKNLVRLLGCC 154
KLG+G FG V+ G +A+K L PG EA V+ K++H+ LV+L
Sbjct: 192 KLGQGCFGEVWMGTWNGTTRVAIKTLKPGNMSP--EAFLQEAQVMKKLRHEKLVQLYAV- 248
Query: 155 IDKDEKILIYEYMPNKSL-DFFLFDPTKRM----LLDWSA------------NYSSR-LK 196
+ ++ ++ EYM SL DF + K + L+D +A NY R L+
Sbjct: 249 VSEEPIYIVTEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVERMNYVHRDLR 308
Query: 197 VSNILLDKDINPKISDFGMARICGGNELQANTSRIVGTYGYMSPEYAIQGIFSIKSDVFS 256
+NIL+ +++ K++DFG+ R+ NE A + +PE A+ G F+IKSDV+S
Sbjct: 309 AANILVGENLVCKVADFGLGRLIEDNEYTARQGAKF-PIKWTAPEAALYGRFTIKSDVWS 367
Query: 257 FGVLLLEIVSGKKT--TGFYRTDSLTLLGYAWDLWTSNRTLELIDPILEDEYSSKHMLLR 314
FG+LL E+ + + G + L + + + P + S H L+
Sbjct: 368 FGILLTELTTKGRVPYPGMVNREVLDQVERGYRM-----------PCPPECPESLHDLM- 415
Query: 315 YVNIALLCVQESADDRPTMNEVVSMLTDEAAALFPPKQPA 354
C ++ ++RPT + + L D + P QP
Sbjct: 416 -----CQCWRKDPEERPTFEYLQAFLEDYFTSTEPQXQPG 450
>pdb|3U4W|A Chain A, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc4b
pdb|3U51|A Chain A, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc1
pdb|3U51|B Chain B, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc1
Length = 275
Score = 85.1 bits (209), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 78/280 (27%), Positives = 129/280 (46%), Gaps = 42/280 (15%)
Query: 96 KLGEGGFGPVYKGVLKKGDEIAVKRL-PGRSGQGLREMKNEASVIAKVQHKNLVRLLGCC 154
KLG+G FG V+ G +A+K L PG EA V+ K++H+ LV+L
Sbjct: 14 KLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSP--EAFLQEAQVMKKLRHEKLVQLYAV- 70
Query: 155 IDKDEKILIYEYMPNKSL-DFFLFDPTKRM----LLDWSA------------NYSSR-LK 196
+ ++ ++ EYM SL DF + K + L+D +A NY R L+
Sbjct: 71 VSEEPIYIVTEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVERMNYVHRDLR 130
Query: 197 VSNILLDKDINPKISDFGMARICGGNELQANTSRIVGTYGYMSPEYAIQGIFSIKSDVFS 256
+NIL+ +++ K++DFG+AR+ NE A + +PE A+ G F+IKSDV+S
Sbjct: 131 AANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPI-KWTAPEAALYGRFTIKSDVWS 189
Query: 257 FGVLLLEIVSGKKT--TGFYRTDSLTLLGYAWDLWTSNRTLELIDPILEDEYSSKHMLLR 314
FG+LL E+ + + G + L + + + P + S H
Sbjct: 190 FGILLTELTTKGRVPYPGMVNREVLDQVERGYRM-----------PCPPECPESLH---- 234
Query: 315 YVNIALLCVQESADDRPTMNEVVSMLTDEAAALFPPKQPA 354
++ C ++ ++RPT + + L D + P QP
Sbjct: 235 --DLMCQCWRKDPEERPTFEYLQAFLEDYFTSTEPQYQPG 272
>pdb|3GVU|A Chain A, The Crystal Structure Of Human Abl2 In Complex With
Gleevec
pdb|3HMI|A Chain A, The Crystal Structure Of Human Abl2 In Complex With
5-Amino-3-{[4-
(Aminosulfonyl)phenyl]amino}-N-(2,
6-Difluorophenyl)-1h-1,2,4- Triazole-1-Carbothioamide
pdb|2XYN|A Chain A, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
pdb|2XYN|B Chain B, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
pdb|2XYN|C Chain C, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
Length = 292
Score = 85.1 bits (209), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 64/191 (33%), Positives = 99/191 (51%), Gaps = 21/191 (10%)
Query: 95 NKLGEGGFGPVYKGVLKKGD-EIAVKRLPGRSGQGLREMKNEASVIAKVQHKNLVRLLGC 153
+KLG G +G VY GV KK +AVK L + + + E EA+V+ +++H NLV+LLG
Sbjct: 38 HKLGGGQYGEVYVGVWKKYSLTVAVKTLKEDTME-VEEFLKEAAVMKEIKHPNLVQLLGV 96
Query: 154 CIDKDEKILIYEYMPNKSLDFFLF-----DPTKRMLLDWSANYSSR-------------L 195
C + ++ EYMP +L +L + T +LL + SS L
Sbjct: 97 CTLEPPFYIVTEYMPYGNLLDYLRECNREEVTAVVLLYMATQISSAMEYLEKKNFIHRDL 156
Query: 196 KVSNILLDKDINPKISDFGMARICGGNELQANTSRIVGTYGYMSPEYAIQGIFSIKSDVF 255
N L+ ++ K++DFG++R+ G+ A+ + +PE FSIKSDV+
Sbjct: 157 AARNCLVGENHVVKVADFGLSRLMTGDTYTAHAGAKFPI-KWTAPESLAYNTFSIKSDVW 215
Query: 256 SFGVLLLEIVS 266
+FGVLL EI +
Sbjct: 216 AFGVLLWEIAT 226
>pdb|3SVV|A Chain A, Crystal Structure Of T338c C-Src Covalently Bound To
Vinylsulfonamide- Pyrazolopyrimidine 9
pdb|3SVV|B Chain B, Crystal Structure Of T338c C-Src Covalently Bound To
Vinylsulfonamide- Pyrazolopyrimidine 9
Length = 286
Score = 85.1 bits (209), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 78/280 (27%), Positives = 129/280 (46%), Gaps = 42/280 (15%)
Query: 96 KLGEGGFGPVYKGVLKKGDEIAVKRL-PGRSGQGLREMKNEASVIAKVQHKNLVRLLGCC 154
KLG+G FG V+ G +A+K L PG EA V+ K++H+ LV+L
Sbjct: 25 KLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSP--EAFLQEAQVMKKLRHEKLVQLYAV- 81
Query: 155 IDKDEKILIYEYMPNKSL-DFFLFDPTKRM----LLDWSA------------NYSSR-LK 196
+ ++ ++ EYM SL DF + K + L+D +A NY R L+
Sbjct: 82 VSEEPIYIVCEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVERMNYVHRDLR 141
Query: 197 VSNILLDKDINPKISDFGMARICGGNELQANTSRIVGTYGYMSPEYAIQGIFSIKSDVFS 256
+NIL+ +++ K++DFG+AR+ NE A + +PE A+ G F+IKSDV+S
Sbjct: 142 AANILVGENLVCKVADFGLARLIEDNEYTARQGAKF-PIKWTAPEAALYGRFTIKSDVWS 200
Query: 257 FGVLLLEIVSGKKT--TGFYRTDSLTLLGYAWDLWTSNRTLELIDPILEDEYSSKHMLLR 314
FG+LL E+ + + G + L + + + P + S H
Sbjct: 201 FGILLTELTTKGRVPYPGMVNREVLDQVERGYRM-----------PCPPECPESLH---- 245
Query: 315 YVNIALLCVQESADDRPTMNEVVSMLTDEAAALFPPKQPA 354
++ C ++ ++RPT + + L D + P QP
Sbjct: 246 --DLMCQCWRKDPEERPTFEYLQAFLEDYFTSTEPQYQPG 283
>pdb|3D7U|B Chain B, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3D7U|D Chain D, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 277
Score = 84.7 bits (208), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 78/280 (27%), Positives = 129/280 (46%), Gaps = 42/280 (15%)
Query: 96 KLGEGGFGPVYKGVLKKGDEIAVKRL-PGRSGQGLREMKNEASVIAKVQHKNLVRLLGCC 154
KLG+G FG V+ G +A+K L PG EA V+ K++H+ LV+L
Sbjct: 16 KLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSP--EAFLQEAQVMKKLRHEKLVQLYAV- 72
Query: 155 IDKDEKILIYEYMPNKSL-DFFLFDPTKRM----LLDWSA------------NYSSR-LK 196
+ ++ ++ EYM SL DF + K + L+D +A NY R L+
Sbjct: 73 VSEEPIYIVTEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVERMNYVHRDLR 132
Query: 197 VSNILLDKDINPKISDFGMARICGGNELQANTSRIVGTYGYMSPEYAIQGIFSIKSDVFS 256
+NIL+ +++ K++DFG+AR+ NE A + +PE A+ G F+IKSDV+S
Sbjct: 133 AANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPI-KWTAPEAALYGRFTIKSDVWS 191
Query: 257 FGVLLLEIVSGKKT--TGFYRTDSLTLLGYAWDLWTSNRTLELIDPILEDEYSSKHMLLR 314
FG+LL E+ + + G + L + + + P + S H
Sbjct: 192 FGILLTELTTKGRVPYPGMVNREVLDQVERGYRM-----------PCPPECPESLH---- 236
Query: 315 YVNIALLCVQESADDRPTMNEVVSMLTDEAAALFPPKQPA 354
++ C ++ ++RPT + + L D + P QP
Sbjct: 237 --DLMCQCWRKDPEERPTFEYLQAFLEDYFTSTEPQYQPG 274
>pdb|2OIQ|A Chain A, Crystal Structure Of Chicken C-Src Kinase Domain In
Complex With The Cancer Drug Imatinib.
pdb|2OIQ|B Chain B, Crystal Structure Of Chicken C-Src Kinase Domain In
Complex With The Cancer Drug Imatinib.
pdb|3D7T|B Chain B, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3DQX|A Chain A, Chicken C-Src Kinase Domain In Complex With Atpgs
pdb|3DQX|B Chain B, Chicken C-Src Kinase Domain In Complex With Atpgs
pdb|3EN4|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp121, A Multitargeted
Kinase Inhibitor
pdb|3EN4|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp121, A Multitargeted
Kinase Inhibitor
pdb|3EN5|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp494, A Multitargeted
Kinase Inhibitor
pdb|3EN5|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp494, A Multitargeted
Kinase Inhibitor
pdb|3EN6|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp102, A Multitargeted
Kinase Inhibitor
pdb|3EN6|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp102, A Multitargeted
Kinase Inhibitor
pdb|3EN7|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With S1, A Multitargeted Kinase
Inhibitor
pdb|3EN7|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With S1, A Multitargeted Kinase
Inhibitor
pdb|3EL7|A Chain A, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 3
pdb|3EL8|A Chain A, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 5
pdb|3EL8|B Chain B, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 5
pdb|3F6X|A Chain A, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|B Chain B, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|C Chain C, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|D Chain D, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3G6G|A Chain A, Equally Potent Inhibition Of C-Src And Abl By Compounds
That Recognize Inactive Kinase Conformations
pdb|3G6G|B Chain B, Equally Potent Inhibition Of C-Src And Abl By Compounds
That Recognize Inactive Kinase Conformations
pdb|4AGW|A Chain A, Discovery Of A Small Molecule Type Ii Inhibitor Of Wild-
Type And Gatekeeper Mutants Of Bcr-Abl, Pdgfralpha, Kit,
And Src Kinases
pdb|4AGW|B Chain B, Discovery Of A Small Molecule Type Ii Inhibitor Of Wild-
Type And Gatekeeper Mutants Of Bcr-Abl, Pdgfralpha, Kit,
And Src Kinases
pdb|3UQF|A Chain A, C-Src Kinase Domain In Complex With Bki Rm-1-89
pdb|3UQF|B Chain B, C-Src Kinase Domain In Complex With Bki Rm-1-89
pdb|3UQG|A Chain A, C-Src Kinase Domain In Complex With Bumpless Bki Analog
Uw1243
pdb|3UQG|B Chain B, C-Src Kinase Domain In Complex With Bumpless Bki Analog
Uw1243
pdb|4DGG|A Chain A, C-Src Kinase Domain In Complex With Rm-1-176
pdb|4DGG|B Chain B, C-Src Kinase Domain In Complex With Rm-1-176
Length = 286
Score = 84.7 bits (208), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 78/280 (27%), Positives = 129/280 (46%), Gaps = 42/280 (15%)
Query: 96 KLGEGGFGPVYKGVLKKGDEIAVKRL-PGRSGQGLREMKNEASVIAKVQHKNLVRLLGCC 154
KLG+G FG V+ G +A+K L PG EA V+ K++H+ LV+L
Sbjct: 25 KLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSP--EAFLQEAQVMKKLRHEKLVQLYAV- 81
Query: 155 IDKDEKILIYEYMPNKSL-DFFLFDPTKRM----LLDWSA------------NYSSR-LK 196
+ ++ ++ EYM SL DF + K + L+D +A NY R L+
Sbjct: 82 VSEEPIYIVTEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVERMNYVHRDLR 141
Query: 197 VSNILLDKDINPKISDFGMARICGGNELQANTSRIVGTYGYMSPEYAIQGIFSIKSDVFS 256
+NIL+ +++ K++DFG+AR+ NE A + +PE A+ G F+IKSDV+S
Sbjct: 142 AANILVGENLVCKVADFGLARLIEDNEYTARQGAKF-PIKWTAPEAALYGRFTIKSDVWS 200
Query: 257 FGVLLLEIVSGKKT--TGFYRTDSLTLLGYAWDLWTSNRTLELIDPILEDEYSSKHMLLR 314
FG+LL E+ + + G + L + + + P + S H
Sbjct: 201 FGILLTELTTKGRVPYPGMVNREVLDQVERGYRM-----------PCPPECPESLH---- 245
Query: 315 YVNIALLCVQESADDRPTMNEVVSMLTDEAAALFPPKQPA 354
++ C ++ ++RPT + + L D + P QP
Sbjct: 246 --DLMCQCWRKDPEERPTFEYLQAFLEDYFTSTEPQYQPG 283
>pdb|3GEQ|A Chain A, Structural Basis For The Chemical Rescue Of Src Kinase
Activity
pdb|3GEQ|B Chain B, Structural Basis For The Chemical Rescue Of Src Kinase
Activity
Length = 286
Score = 84.0 bits (206), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 78/280 (27%), Positives = 128/280 (45%), Gaps = 42/280 (15%)
Query: 96 KLGEGGFGPVYKGVLKKGDEIAVKRL-PGRSGQGLREMKNEASVIAKVQHKNLVRLLGCC 154
KLG+G FG V+ G +A+K L PG EA V+ K++H+ LV+L
Sbjct: 25 KLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSP--EAFLQEAQVMKKLRHEKLVQLYAV- 81
Query: 155 IDKDEKILIYEYMPNKSL-DFFLFDPTKRM----LLDWSA------------NYSSR-LK 196
+ ++ ++ EYM SL DF + K + L+D +A NY R L
Sbjct: 82 VSEEPIYIVTEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVERMNYVHRDLA 141
Query: 197 VSNILLDKDINPKISDFGMARICGGNELQANTSRIVGTYGYMSPEYAIQGIFSIKSDVFS 256
+NIL+ +++ K++DFG+AR+ NE A + +PE A+ G F+IKSDV+S
Sbjct: 142 AANILVGENLVCKVADFGLARLIEDNEYTARQGAKF-PIKWTAPEAALYGRFTIKSDVWS 200
Query: 257 FGVLLLEIVSGKKT--TGFYRTDSLTLLGYAWDLWTSNRTLELIDPILEDEYSSKHMLLR 314
FG+LL E+ + + G + L + + + P + S H
Sbjct: 201 FGILLTELTTKGRVPYPGMVNREVLDQVERGYRM-----------PCPPECPESLH---- 245
Query: 315 YVNIALLCVQESADDRPTMNEVVSMLTDEAAALFPPKQPA 354
++ C ++ ++RPT + + L D + P QP
Sbjct: 246 --DLMCQCWRKDPEERPTFEYLQAFLEDYFTSTEPQYQPG 283
>pdb|2QQ7|A Chain A, Crystal Structure Of Drug Resistant Src Kinase Domain With
Irreversible Inhibitor
pdb|2QQ7|B Chain B, Crystal Structure Of Drug Resistant Src Kinase Domain With
Irreversible Inhibitor
pdb|2QI8|A Chain A, Crystal Structure Of Drug Resistant Src Kinase Domain
pdb|2QI8|B Chain B, Crystal Structure Of Drug Resistant Src Kinase Domain
pdb|3F3W|A Chain A, Drug Resistant Csrc Kinase Domain In Complex With
Inhibitor Rl45 (Type Ii)
pdb|3F3W|B Chain B, Drug Resistant Csrc Kinase Domain In Complex With
Inhibitor Rl45 (Type Ii)
pdb|3LOK|A Chain A, Drug Resistant Csrc Kinase Domain In Complex With Covalent
Inhibitor Pd168393
pdb|3LOK|B Chain B, Drug Resistant Csrc Kinase Domain In Complex With Covalent
Inhibitor Pd168393
Length = 286
Score = 83.6 bits (205), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 77/280 (27%), Positives = 128/280 (45%), Gaps = 42/280 (15%)
Query: 96 KLGEGGFGPVYKGVLKKGDEIAVKRL-PGRSGQGLREMKNEASVIAKVQHKNLVRLLGCC 154
KLG+G FG V+ G +A+K L PG EA V+ K++H+ LV+L
Sbjct: 25 KLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSP--EAFLQEAQVMKKLRHEKLVQLYAV- 81
Query: 155 IDKDEKILIYEYMPNKSL-DFFLFDPTKRM----LLDWSA------------NYSSR-LK 196
+ ++ ++ EYM L DF + K + L+D +A NY R L+
Sbjct: 82 VSEEPIYIVMEYMSKGCLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVERMNYVHRDLR 141
Query: 197 VSNILLDKDINPKISDFGMARICGGNELQANTSRIVGTYGYMSPEYAIQGIFSIKSDVFS 256
+NIL+ +++ K++DFG+AR+ NE A + +PE A+ G F+IKSDV+S
Sbjct: 142 AANILVGENLVCKVADFGLARLIEDNEYTARQGAKF-PIKWTAPEAALYGRFTIKSDVWS 200
Query: 257 FGVLLLEIVSGKKT--TGFYRTDSLTLLGYAWDLWTSNRTLELIDPILEDEYSSKHMLLR 314
FG+LL E+ + + G + L + + + P + S H
Sbjct: 201 FGILLTELTTKGRVPYPGMVNREVLDQVERGYRM-----------PCPPECPESLH---- 245
Query: 315 YVNIALLCVQESADDRPTMNEVVSMLTDEAAALFPPKQPA 354
++ C ++ ++RPT + + L D + P QP
Sbjct: 246 --DLMCQCWRKDPEERPTFEYLQAFLEDYFTSTEPQYQPG 283
>pdb|2HWO|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor
pdb|2HWO|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor
pdb|2HWP|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor Pd168393
pdb|2HWP|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor Pd168393
pdb|2QLQ|A Chain A, Crystal Structure Of Src Kinase Domain With Covalent
Inhibitor Rl3
pdb|2QLQ|B Chain B, Crystal Structure Of Src Kinase Domain With Covalent
Inhibitor Rl3
pdb|3F3T|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl38 (Type
Iii)
pdb|3F3T|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl38 (Type
Iii)
pdb|3F3U|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl37 (Type
Iii)
pdb|3F3U|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl37 (Type
Iii)
pdb|3F3V|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl45 (Type
Ii)
pdb|3F3V|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl45 (Type
Ii)
pdb|3G5D|A Chain A, Kinase Domain Of Csrc In Complex With Dasatinib
pdb|3G5D|B Chain B, Kinase Domain Of Csrc In Complex With Dasatinib
pdb|3TZ7|A Chain A, Kinase Domain Of Csrc In Complex With Rl103
pdb|3TZ7|B Chain B, Kinase Domain Of Csrc In Complex With Rl103
pdb|3TZ8|A Chain A, Kinase Domain Of Csrc In Complex With Rl104
pdb|3TZ8|B Chain B, Kinase Domain Of Csrc In Complex With Rl104
pdb|3TZ9|A Chain A, Kinase Domain Of Csrc In Complex With Rl130
pdb|3TZ9|B Chain B, Kinase Domain Of Csrc In Complex With Rl130
Length = 286
Score = 83.6 bits (205), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 77/280 (27%), Positives = 128/280 (45%), Gaps = 42/280 (15%)
Query: 96 KLGEGGFGPVYKGVLKKGDEIAVKRL-PGRSGQGLREMKNEASVIAKVQHKNLVRLLGCC 154
KLG+G FG V+ G +A+K L PG EA V+ K++H+ LV+L
Sbjct: 25 KLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSP--EAFLQEAQVMKKLRHEKLVQLYAV- 81
Query: 155 IDKDEKILIYEYMPNKSL-DFFLFDPTKRM----LLDWSA------------NYSSR-LK 196
+ ++ ++ EYM L DF + K + L+D +A NY R L+
Sbjct: 82 VSEEPIYIVTEYMSKGCLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVERMNYVHRDLR 141
Query: 197 VSNILLDKDINPKISDFGMARICGGNELQANTSRIVGTYGYMSPEYAIQGIFSIKSDVFS 256
+NIL+ +++ K++DFG+AR+ NE A + +PE A+ G F+IKSDV+S
Sbjct: 142 AANILVGENLVCKVADFGLARLIEDNEYTARQGAKF-PIKWTAPEAALYGRFTIKSDVWS 200
Query: 257 FGVLLLEIVSGKKT--TGFYRTDSLTLLGYAWDLWTSNRTLELIDPILEDEYSSKHMLLR 314
FG+LL E+ + + G + L + + + P + S H
Sbjct: 201 FGILLTELTTKGRVPYPGMVNREVLDQVERGYRM-----------PCPPECPESLH---- 245
Query: 315 YVNIALLCVQESADDRPTMNEVVSMLTDEAAALFPPKQPA 354
++ C ++ ++RPT + + L D + P QP
Sbjct: 246 --DLMCQCWRKDPEERPTFEYLQAFLEDYFTSTEPQYQPG 283
>pdb|1AD5|A Chain A, Src Family Kinase Hck-Amp-Pnp Complex
pdb|1AD5|B Chain B, Src Family Kinase Hck-Amp-Pnp Complex
pdb|2HCK|A Chain A, Src Family Kinase Hck-Quercetin Complex
pdb|2HCK|B Chain B, Src Family Kinase Hck-Quercetin Complex
Length = 438
Score = 82.8 bits (203), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 92/341 (26%), Positives = 148/341 (43%), Gaps = 69/341 (20%)
Query: 26 FYCARRKPRSRGEDLMTLDLDLNLKANN---VNIELPVNSKQTKRSKKKEVDQLPLFSFS 82
FY + PRS L L +D K N+ + +P S + ++ +K+ ++P S
Sbjct: 130 FYIS---PRSTFSTLQEL-VDHYKKGNDGLCQKLSVPCMSSKPQKPWEKDAWEIPRESLK 185
Query: 83 SVSTATNKFSDANKLGEGGFGPVYKGVLKKGDEIAVKRL-PGRSGQGLREMKNEASVIAK 141
KLG G FG V+ K ++AVK + PG + EA+V+
Sbjct: 186 L----------EKKLGAGQFGEVWMATYNKHTKVAVKTMKPG--SMSVEAFLAEANVMKT 233
Query: 142 VQHKNLVRLLGCCIDKDEKILIYEYMPNKSL-DFFLFDPTKRM----LLDWSA------- 189
+QH LV+L + K+ +I E+M SL DF D + L+D+SA
Sbjct: 234 LQHDKLVKL-HAVVTKEPIYIITEFMAKGSLLDFLKSDEGSKQPLPKLIDFSAQIAEGMA 292
Query: 190 -----NYSSR-LKVSNILLDKDINPKISDFGMARICGGNELQANTSRIVGTYGYMSPEYA 243
NY R L+ +NIL+ + KI+DFG+AR+ ++ + +PE
Sbjct: 293 FIEQRNYIHRDLRAANILVSASLVCKIADFGLARVGAKFPIK-----------WTAPEAI 341
Query: 244 IQGIFSIKSDVFSFGVLLLEIVSGKKT--TGFYRTDSLTLLGYAWDLWTSNRTLELIDPI 301
G F+IKSDV+SFG+LL+EIV+ + G + + L + + E +
Sbjct: 342 NFGSFTIKSDVWSFGILLMEIVTYGRIPYPGMSNPEVIRALERGYRMPRPENCPEEL--- 398
Query: 302 LEDEYSSKHMLLRYVNIALLCVQESADDRPTMNEVVSMLTD 342
NI + C + ++RPT + S+L D
Sbjct: 399 --------------YNIMMRCWKNRPEERPTFEYIQSVLDD 425
>pdb|3DK6|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK6|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 293
Score = 82.4 bits (202), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 63/191 (32%), Positives = 100/191 (52%), Gaps = 21/191 (10%)
Query: 95 NKLGEGGFGPVYKGVLKKGD-EIAVKRLPGRSGQGLREMKNEASVIAKVQHKNLVRLLGC 153
+KLG G FG VY+GV KK +AVK L + + + E EA+V+ +++H NLV+LLG
Sbjct: 17 HKLGGGQFGEVYEGVWKKYSLTVAVKTLKEDTME-VEEFLKEAAVMKEIKHPNLVQLLGV 75
Query: 154 CIDKDEKILIYEYMPNKSLDFFLFDPTKR-----MLLDWSANYSSR-------------L 195
C + +I E+M +L +L + ++ +LL + SS L
Sbjct: 76 CTREPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKKNFIHRDL 135
Query: 196 KVSNILLDKDINPKISDFGMARICGGNELQANTSRIVGTYGYMSPEYAIQGIFSIKSDVF 255
N L+ ++ K++DFG++R+ G+ A+ + +PE FSIKSDV+
Sbjct: 136 AARNCLVGENHLVKVADFGLSRLMTGDTXTAHAGAKFPI-KWTAPESLAYNKFSIKSDVW 194
Query: 256 SFGVLLLEIVS 266
+FGVLL EI +
Sbjct: 195 AFGVLLWEIAT 205
>pdb|3QRJ|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain T315i
Mutant In Complex With Dcc-2036
pdb|3QRJ|B Chain B, The Crystal Structure Of Human Abl1 Kinase Domain T315i
Mutant In Complex With Dcc-2036
Length = 277
Score = 82.0 bits (201), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 62/191 (32%), Positives = 100/191 (52%), Gaps = 21/191 (10%)
Query: 95 NKLGEGGFGPVYKGVLKKGD-EIAVKRLPGRSGQGLREMKNEASVIAKVQHKNLVRLLGC 153
+KLG G +G VY+GV KK +AVK L + + + E EA+V+ +++H NLV+LLG
Sbjct: 24 HKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME-VEEFLKEAAVMKEIKHPNLVQLLGV 82
Query: 154 CIDKDEKILIYEYMPNKSLDFFLFDPTKR-----MLLDWSANYSSR-------------L 195
C + +I E+M +L +L + ++ +LL + SS L
Sbjct: 83 CTREPPFYIIIEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKKNFIHRDL 142
Query: 196 KVSNILLDKDINPKISDFGMARICGGNELQANTSRIVGTYGYMSPEYAIQGIFSIKSDVF 255
N L+ ++ K++DFG++R+ G+ A+ + +PE FSIKSDV+
Sbjct: 143 AARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPI-KWTAPESLAYNKFSIKSDVW 201
Query: 256 SFGVLLLEIVS 266
+FGVLL EI +
Sbjct: 202 AFGVLLWEIAT 212
>pdb|1OPK|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
Length = 495
Score = 82.0 bits (201), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 62/191 (32%), Positives = 100/191 (52%), Gaps = 21/191 (10%)
Query: 95 NKLGEGGFGPVYKGVLKKGD-EIAVKRLPGRSGQGLREMKNEASVIAKVQHKNLVRLLGC 153
+KLG G +G VY+GV KK +AVK L + + + E EA+V+ +++H NLV+LLG
Sbjct: 226 HKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME-VEEFLKEAAVMKEIKHPNLVQLLGV 284
Query: 154 CIDKDEKILIYEYMPNKSLDFFLFDPTKR-----MLLDWSANYSS-------------RL 195
C + +I E+M +L +L + ++ +LL + SS L
Sbjct: 285 CTREPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKKNFIHRNL 344
Query: 196 KVSNILLDKDINPKISDFGMARICGGNELQANTSRIVGTYGYMSPEYAIQGIFSIKSDVF 255
N L+ ++ K++DFG++R+ G+ A+ + +PE FSIKSDV+
Sbjct: 345 AARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPI-KWTAPESLAYNKFSIKSDVW 403
Query: 256 SFGVLLLEIVS 266
+FGVLL EI +
Sbjct: 404 AFGVLLWEIAT 414
>pdb|3QRI|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dcc- 2036
pdb|3QRI|B Chain B, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dcc- 2036
pdb|3QRK|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dp- 987
Length = 277
Score = 81.6 bits (200), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 62/191 (32%), Positives = 100/191 (52%), Gaps = 21/191 (10%)
Query: 95 NKLGEGGFGPVYKGVLKKGD-EIAVKRLPGRSGQGLREMKNEASVIAKVQHKNLVRLLGC 153
+KLG G +G VY+GV KK +AVK L + + + E EA+V+ +++H NLV+LLG
Sbjct: 24 HKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME-VEEFLKEAAVMKEIKHPNLVQLLGV 82
Query: 154 CIDKDEKILIYEYMPNKSLDFFLFDPTKR-----MLLDWSANYSSR-------------L 195
C + +I E+M +L +L + ++ +LL + SS L
Sbjct: 83 CTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKKNFIHRDL 142
Query: 196 KVSNILLDKDINPKISDFGMARICGGNELQANTSRIVGTYGYMSPEYAIQGIFSIKSDVF 255
N L+ ++ K++DFG++R+ G+ A+ + +PE FSIKSDV+
Sbjct: 143 AARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPI-KWTAPESLAYNKFSIKSDVW 201
Query: 256 SFGVLLLEIVS 266
+FGVLL EI +
Sbjct: 202 AFGVLLWEIAT 212
>pdb|2HYY|A Chain A, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|B Chain B, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|C Chain C, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|D Chain D, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HZ4|A Chain A, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
pdb|2HZ4|B Chain B, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
pdb|2HZ4|C Chain C, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
Length = 273
Score = 81.6 bits (200), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 62/191 (32%), Positives = 100/191 (52%), Gaps = 21/191 (10%)
Query: 95 NKLGEGGFGPVYKGVLKKGD-EIAVKRLPGRSGQGLREMKNEASVIAKVQHKNLVRLLGC 153
+KLG G +G VY+GV KK +AVK L + + + E EA+V+ +++H NLV+LLG
Sbjct: 19 HKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME-VEEFLKEAAVMKEIKHPNLVQLLGV 77
Query: 154 CIDKDEKILIYEYMPNKSLDFFLFDPTKR-----MLLDWSANYSSR-------------L 195
C + +I E+M +L +L + ++ +LL + SS L
Sbjct: 78 CTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKKNFIHRDL 137
Query: 196 KVSNILLDKDINPKISDFGMARICGGNELQANTSRIVGTYGYMSPEYAIQGIFSIKSDVF 255
N L+ ++ K++DFG++R+ G+ A+ + +PE FSIKSDV+
Sbjct: 138 AARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPI-KWTAPESLAYNKFSIKSDVW 196
Query: 256 SFGVLLLEIVS 266
+FGVLL EI +
Sbjct: 197 AFGVLLWEIAT 207
>pdb|3DK3|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK3|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 293
Score = 81.6 bits (200), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 62/191 (32%), Positives = 100/191 (52%), Gaps = 21/191 (10%)
Query: 95 NKLGEGGFGPVYKGVLKKGD-EIAVKRLPGRSGQGLREMKNEASVIAKVQHKNLVRLLGC 153
+KLG G +G VY+GV KK +AVK L + + + E EA+V+ +++H NLV+LLG
Sbjct: 17 HKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME-VEEFLKEAAVMKEIKHPNLVQLLGV 75
Query: 154 CIDKDEKILIYEYMPNKSLDFFLFDPTKR-----MLLDWSANYSSR-------------L 195
C + +I E+M +L +L + ++ +LL + SS L
Sbjct: 76 CTREPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKKNFIHRDL 135
Query: 196 KVSNILLDKDINPKISDFGMARICGGNELQANTSRIVGTYGYMSPEYAIQGIFSIKSDVF 255
N L+ ++ K++DFG++R+ G+ A+ + +PE FSIKSDV+
Sbjct: 136 AARNCLVGENHLVKVADFGLSRLMTGDTFTAHAGAKFPI-KWTAPESLAYNKFSIKSDVW 194
Query: 256 SFGVLLLEIVS 266
+FGVLL EI +
Sbjct: 195 AFGVLLWEIAT 205
>pdb|2HZI|A Chain A, Abl Kinase Domain In Complex With Pd180970
pdb|2HZI|B Chain B, Abl Kinase Domain In Complex With Pd180970
pdb|3CS9|A Chain A, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|B Chain B, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|C Chain C, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|D Chain D, Human Abl Kinase In Complex With Nilotinib
Length = 277
Score = 81.6 bits (200), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 62/191 (32%), Positives = 100/191 (52%), Gaps = 21/191 (10%)
Query: 95 NKLGEGGFGPVYKGVLKKGD-EIAVKRLPGRSGQGLREMKNEASVIAKVQHKNLVRLLGC 153
+KLG G +G VY+GV KK +AVK L + + + E EA+V+ +++H NLV+LLG
Sbjct: 23 HKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME-VEEFLKEAAVMKEIKHPNLVQLLGV 81
Query: 154 CIDKDEKILIYEYMPNKSLDFFLFDPTKR-----MLLDWSANYSSR-------------L 195
C + +I E+M +L +L + ++ +LL + SS L
Sbjct: 82 CTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKKNFIHRDL 141
Query: 196 KVSNILLDKDINPKISDFGMARICGGNELQANTSRIVGTYGYMSPEYAIQGIFSIKSDVF 255
N L+ ++ K++DFG++R+ G+ A+ + +PE FSIKSDV+
Sbjct: 142 AARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPI-KWTAPESLAYNKFSIKSDVW 200
Query: 256 SFGVLLLEIVS 266
+FGVLL EI +
Sbjct: 201 AFGVLLWEIAT 211
>pdb|3OY3|A Chain A, Crystal Structure Of Abl T315i Mutant Kinase Domain Bound
With A Dfg- Out Inhibitor Ap24589
pdb|3OY3|B Chain B, Crystal Structure Of Abl T315i Mutant Kinase Domain Bound
With A Dfg- Out Inhibitor Ap24589
Length = 284
Score = 81.6 bits (200), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 62/191 (32%), Positives = 100/191 (52%), Gaps = 21/191 (10%)
Query: 95 NKLGEGGFGPVYKGVLKKGD-EIAVKRLPGRSGQGLREMKNEASVIAKVQHKNLVRLLGC 153
+KLG G +G VY+GV KK +AVK L + + + E EA+V+ +++H NLV+LLG
Sbjct: 19 HKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME-VEEFLKEAAVMKEIKHPNLVQLLGV 77
Query: 154 CIDKDEKILIYEYMPNKSLDFFLFDPTKR-----MLLDWSANYSSR-------------L 195
C + +I E+M +L +L + ++ +LL + SS L
Sbjct: 78 CTREPPFYIIIEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKKNFIHRDL 137
Query: 196 KVSNILLDKDINPKISDFGMARICGGNELQANTSRIVGTYGYMSPEYAIQGIFSIKSDVF 255
N L+ ++ K++DFG++R+ G+ A+ + +PE FSIKSDV+
Sbjct: 138 AARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPI-KWTAPESLAYNKFSIKSDVW 196
Query: 256 SFGVLLLEIVS 266
+FGVLL EI +
Sbjct: 197 AFGVLLWEIAT 207
>pdb|2HZ0|A Chain A, Abl Kinase Domain In Complex With Nvp-Aeg082
pdb|2HZ0|B Chain B, Abl Kinase Domain In Complex With Nvp-Aeg082
Length = 270
Score = 81.6 bits (200), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 62/191 (32%), Positives = 100/191 (52%), Gaps = 21/191 (10%)
Query: 95 NKLGEGGFGPVYKGVLKKGD-EIAVKRLPGRSGQGLREMKNEASVIAKVQHKNLVRLLGC 153
+KLG G +G VY+GV KK +AVK L + + + E EA+V+ +++H NLV+LLG
Sbjct: 19 HKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME-VEEFLKEAAVMKEIKHPNLVQLLGV 77
Query: 154 CIDKDEKILIYEYMPNKSLDFFLFDPTKR-----MLLDWSANYSSR-------------L 195
C + +I E+M +L +L + ++ +LL + SS L
Sbjct: 78 CTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKKNFIHRDL 137
Query: 196 KVSNILLDKDINPKISDFGMARICGGNELQANTSRIVGTYGYMSPEYAIQGIFSIKSDVF 255
N L+ ++ K++DFG++R+ G+ A+ + +PE FSIKSDV+
Sbjct: 138 AARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPI-KWTAPESLAYNKFSIKSDVW 196
Query: 256 SFGVLLLEIVS 266
+FGVLL EI +
Sbjct: 197 AFGVLLWEIAT 207
>pdb|3DK7|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK7|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 277
Score = 81.6 bits (200), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 62/191 (32%), Positives = 100/191 (52%), Gaps = 21/191 (10%)
Query: 95 NKLGEGGFGPVYKGVLKKGD-EIAVKRLPGRSGQGLREMKNEASVIAKVQHKNLVRLLGC 153
+KLG G +G VY+GV KK +AVK L + + + E EA+V+ +++H NLV+LLG
Sbjct: 17 HKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME-VEEFLKEAAVMKEIKHPNLVQLLGV 75
Query: 154 CIDKDEKILIYEYMPNKSLDFFLFDPTKR-----MLLDWSANYSSR-------------L 195
C + +I E+M +L +L + ++ +LL + SS L
Sbjct: 76 CTREPPFYIIIEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKKNFIHRDL 135
Query: 196 KVSNILLDKDINPKISDFGMARICGGNELQANTSRIVGTYGYMSPEYAIQGIFSIKSDVF 255
N L+ ++ K++DFG++R+ G+ A+ + +PE FSIKSDV+
Sbjct: 136 AARNCLVGENHLVKVADFGLSRLMTGDTXTAHAGAKFPI-KWTAPESLAYNKFSIKSDVW 194
Query: 256 SFGVLLLEIVS 266
+FGVLL EI +
Sbjct: 195 AFGVLLWEIAT 205
>pdb|1FPU|A Chain A, Crystal Structure Of Abl Kinase Domain In Complex With A
Small Molecule Inhibitor
pdb|1FPU|B Chain B, Crystal Structure Of Abl Kinase Domain In Complex With A
Small Molecule Inhibitor
pdb|1IEP|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Sti-571.
pdb|1IEP|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Sti-571.
pdb|1M52|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Pd173955
pdb|1M52|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Pd173955
pdb|1OPJ|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|1OPJ|B Chain B, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|2HZN|A Chain A, Abl Kinase Domain In Complex With Nvp-Afg210
pdb|3K5V|A Chain A, Structure Of Abl Kinase In Complex With Imatinib And Gnf-2
pdb|3K5V|B Chain B, Structure Of Abl Kinase In Complex With Imatinib And Gnf-2
pdb|3MS9|A Chain A, Abl Kinase In Complex With Imatinib And A Fragment (Frag1)
I Myristate Pocket
pdb|3MS9|B Chain B, Abl Kinase In Complex With Imatinib And A Fragment (Frag1)
I Myristate Pocket
pdb|3MSS|A Chain A, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|B Chain B, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|C Chain C, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|D Chain D, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
Length = 293
Score = 81.6 bits (200), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 62/191 (32%), Positives = 100/191 (52%), Gaps = 21/191 (10%)
Query: 95 NKLGEGGFGPVYKGVLKKGD-EIAVKRLPGRSGQGLREMKNEASVIAKVQHKNLVRLLGC 153
+KLG G +G VY+GV KK +AVK L + + + E EA+V+ +++H NLV+LLG
Sbjct: 24 HKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME-VEEFLKEAAVMKEIKHPNLVQLLGV 82
Query: 154 CIDKDEKILIYEYMPNKSLDFFLFDPTKR-----MLLDWSANYSSR-------------L 195
C + +I E+M +L +L + ++ +LL + SS L
Sbjct: 83 CTREPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKKNFIHRDL 142
Query: 196 KVSNILLDKDINPKISDFGMARICGGNELQANTSRIVGTYGYMSPEYAIQGIFSIKSDVF 255
N L+ ++ K++DFG++R+ G+ A+ + +PE FSIKSDV+
Sbjct: 143 AARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPI-KWTAPESLAYNKFSIKSDVW 201
Query: 256 SFGVLLLEIVS 266
+FGVLL EI +
Sbjct: 202 AFGVLLWEIAT 212
>pdb|1OPL|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|1OPL|B Chain B, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
Length = 537
Score = 81.3 bits (199), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 77/261 (29%), Positives = 124/261 (47%), Gaps = 36/261 (13%)
Query: 95 NKLGEGGFGPVYKGVLKKGD-EIAVKRLPGRSGQGLREMKNEASVIAKVQHKNLVRLLGC 153
+KLG G +G VY+GV KK +AVK L + + + E EA+V+ +++H NLV+LLG
Sbjct: 265 HKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME-VEEFLKEAAVMKEIKHPNLVQLLGV 323
Query: 154 CIDKDEKILIYEYMPNKSLDFFLFDPTKR-----MLLDWSANYSS-------------RL 195
C + +I E+M +L +L + ++ +LL + SS L
Sbjct: 324 CTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKKNFIHRNL 383
Query: 196 KVSNILLDKDINPKISDFGMARICGGNELQANTSRIVGTYGYMSPEYAIQGIFSIKSDVF 255
N L+ ++ K++DFG++R+ G+ A+ + +PE FSIKSDV+
Sbjct: 384 AARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPI-KWTAPESLAYNKFSIKSDVW 442
Query: 256 SFGVLLLEIVSGKKTTGFYRTDSLTLLGYAWDLWTSNRTLELIDPILEDEYSSKHMLLRY 315
+FGVLL EI T G + L ++L + +E + E Y L+R
Sbjct: 443 AFGVLLWEIA----TYGMSPYPGID-LSQVYELLEKDYRMERPEGCPEKVYE----LMR- 492
Query: 316 VNIALLCVQESADDRPTMNEV 336
C Q + DRP+ E+
Sbjct: 493 -----ACWQWNPSDRPSFAEI 508
>pdb|3OXZ|A Chain A, Crystal Structure Of Abl Kinase Domain Bound With A
Dfg-Out Inhibitor Ap24534
Length = 284
Score = 81.3 bits (199), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 62/191 (32%), Positives = 100/191 (52%), Gaps = 21/191 (10%)
Query: 95 NKLGEGGFGPVYKGVLKKGD-EIAVKRLPGRSGQGLREMKNEASVIAKVQHKNLVRLLGC 153
+KLG G +G VY+GV KK +AVK L + + + E EA+V+ +++H NLV+LLG
Sbjct: 19 HKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME-VEEFLKEAAVMKEIKHPNLVQLLGV 77
Query: 154 CIDKDEKILIYEYMPNKSLDFFLFDPTKR-----MLLDWSANYSSR-------------L 195
C + +I E+M +L +L + ++ +LL + SS L
Sbjct: 78 CTREPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKKNFIHRDL 137
Query: 196 KVSNILLDKDINPKISDFGMARICGGNELQANTSRIVGTYGYMSPEYAIQGIFSIKSDVF 255
N L+ ++ K++DFG++R+ G+ A+ + +PE FSIKSDV+
Sbjct: 138 AARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPI-KWTAPESLAYNKFSIKSDVW 196
Query: 256 SFGVLLLEIVS 266
+FGVLL EI +
Sbjct: 197 AFGVLLWEIAT 207
>pdb|2E2B|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Inno-406
pdb|2E2B|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Inno-406
Length = 293
Score = 81.3 bits (199), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 62/191 (32%), Positives = 100/191 (52%), Gaps = 21/191 (10%)
Query: 95 NKLGEGGFGPVYKGVLKKGD-EIAVKRLPGRSGQGLREMKNEASVIAKVQHKNLVRLLGC 153
+KLG G +G VY+GV KK +AVK L + + + E EA+V+ +++H NLV+LLG
Sbjct: 24 HKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME-VEEFLKEAAVMKEIKHPNLVQLLGV 82
Query: 154 CIDKDEKILIYEYMPNKSLDFFLFDPTKR-----MLLDWSANYSSR-------------L 195
C + +I E+M +L +L + ++ +LL + SS L
Sbjct: 83 CTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKKNFIHRDL 142
Query: 196 KVSNILLDKDINPKISDFGMARICGGNELQANTSRIVGTYGYMSPEYAIQGIFSIKSDVF 255
N L+ ++ K++DFG++R+ G+ A+ + +PE FSIKSDV+
Sbjct: 143 AARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPI-KWTAPESLAYNKFSIKSDVW 201
Query: 256 SFGVLLLEIVS 266
+FGVLL EI +
Sbjct: 202 AFGVLLWEIAT 212
>pdb|2GQG|A Chain A, X-Ray Crystal Structure Of Dasatinib (Bms-354825) Bound To
Activated Abl Kinase Domain
pdb|2GQG|B Chain B, X-Ray Crystal Structure Of Dasatinib (Bms-354825) Bound To
Activated Abl Kinase Domain
Length = 278
Score = 81.3 bits (199), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 62/191 (32%), Positives = 100/191 (52%), Gaps = 21/191 (10%)
Query: 95 NKLGEGGFGPVYKGVLKKGD-EIAVKRLPGRSGQGLREMKNEASVIAKVQHKNLVRLLGC 153
+KLG G +G VY+GV KK +AVK L + + + E EA+V+ +++H NLV+LLG
Sbjct: 24 HKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME-VEEFLKEAAVMKEIKHPNLVQLLGV 82
Query: 154 CIDKDEKILIYEYMPNKSLDFFLFDPTKR-----MLLDWSANYSSR-------------L 195
C + +I E+M +L +L + ++ +LL + SS L
Sbjct: 83 CTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKKNFIHRDL 142
Query: 196 KVSNILLDKDINPKISDFGMARICGGNELQANTSRIVGTYGYMSPEYAIQGIFSIKSDVF 255
N L+ ++ K++DFG++R+ G+ A+ + +PE FSIKSDV+
Sbjct: 143 AARNCLVGENHLVKVADFGLSRLMTGDTXTAHAGAKFPI-KWTAPESLAYNKFSIKSDVW 201
Query: 256 SFGVLLLEIVS 266
+FGVLL EI +
Sbjct: 202 AFGVLLWEIAT 212
>pdb|2FO0|A Chain A, Organization Of The Sh3-Sh2 Unit In Active And Inactive
Forms Of The C-Abl Tyrosine Kinase
Length = 495
Score = 81.3 bits (199), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 62/191 (32%), Positives = 100/191 (52%), Gaps = 21/191 (10%)
Query: 95 NKLGEGGFGPVYKGVLKKGD-EIAVKRLPGRSGQGLREMKNEASVIAKVQHKNLVRLLGC 153
+KLG G +G VY+GV KK +AVK L + + + E EA+V+ +++H NLV+LLG
Sbjct: 223 HKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME-VEEFLKEAAVMKEIKHPNLVQLLGV 281
Query: 154 CIDKDEKILIYEYMPNKSLDFFLFDPTKR-----MLLDWSANYSS-------------RL 195
C + +I E+M +L +L + ++ +LL + SS L
Sbjct: 282 CTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKKNFIHRNL 341
Query: 196 KVSNILLDKDINPKISDFGMARICGGNELQANTSRIVGTYGYMSPEYAIQGIFSIKSDVF 255
N L+ ++ K++DFG++R+ G+ A+ + +PE FSIKSDV+
Sbjct: 342 AARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPI-KWTAPESLAYNKFSIKSDVW 400
Query: 256 SFGVLLLEIVS 266
+FGVLL EI +
Sbjct: 401 AFGVLLWEIAT 411
>pdb|2Z60|A Chain A, Crystal Structure Of The T315i Mutant Of Abl Kinase Bound
With Ppy-A
pdb|3IK3|A Chain A, Ap24534, A Pan-Bcr-Abl Inhibitor For Chronic Myeloid
Leukemi Potently Inhibits The T315i Mutant And Overcomes
Mutation-B Resistance
pdb|3IK3|B Chain B, Ap24534, A Pan-Bcr-Abl Inhibitor For Chronic Myeloid
Leukemi Potently Inhibits The T315i Mutant And Overcomes
Mutation-B Resistance
Length = 288
Score = 81.3 bits (199), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 62/191 (32%), Positives = 100/191 (52%), Gaps = 21/191 (10%)
Query: 95 NKLGEGGFGPVYKGVLKKGD-EIAVKRLPGRSGQGLREMKNEASVIAKVQHKNLVRLLGC 153
+KLG G +G VY+GV KK +AVK L + + + E EA+V+ +++H NLV+LLG
Sbjct: 19 HKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME-VEEFLKEAAVMKEIKHPNLVQLLGV 77
Query: 154 CIDKDEKILIYEYMPNKSLDFFLFDPTKR-----MLLDWSANYSSR-------------L 195
C + +I E+M +L +L + ++ +LL + SS L
Sbjct: 78 CTREPPFYIIIEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKKNFIHRDL 137
Query: 196 KVSNILLDKDINPKISDFGMARICGGNELQANTSRIVGTYGYMSPEYAIQGIFSIKSDVF 255
N L+ ++ K++DFG++R+ G+ A+ + +PE FSIKSDV+
Sbjct: 138 AARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPI-KWTAPESLAYNKFSIKSDVW 196
Query: 256 SFGVLLLEIVS 266
+FGVLL EI +
Sbjct: 197 AFGVLLWEIAT 207
>pdb|2HIW|A Chain A, Crystal Structure Of Inactive Conformation Abl Kinase
Catalytic Domain Complexed With Type Ii Inhibitor
pdb|2HIW|B Chain B, Crystal Structure Of Inactive Conformation Abl Kinase
Catalytic Domain Complexed With Type Ii Inhibitor
Length = 287
Score = 81.3 bits (199), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 62/191 (32%), Positives = 100/191 (52%), Gaps = 21/191 (10%)
Query: 95 NKLGEGGFGPVYKGVLKKGD-EIAVKRLPGRSGQGLREMKNEASVIAKVQHKNLVRLLGC 153
+KLG G +G VY+GV KK +AVK L + + + E EA+V+ +++H NLV+LLG
Sbjct: 21 HKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME-VEEFLKEAAVMKEIKHPNLVQLLGV 79
Query: 154 CIDKDEKILIYEYMPNKSLDFFLFDPTKR-----MLLDWSANYSSR-------------L 195
C + +I E+M +L +L + ++ +LL + SS L
Sbjct: 80 CTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKKNFIHRDL 139
Query: 196 KVSNILLDKDINPKISDFGMARICGGNELQANTSRIVGTYGYMSPEYAIQGIFSIKSDVF 255
N L+ ++ K++DFG++R+ G+ A+ + +PE FSIKSDV+
Sbjct: 140 AARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPI-KWTAPESLAYNKFSIKSDVW 198
Query: 256 SFGVLLLEIVS 266
+FGVLL EI +
Sbjct: 199 AFGVLLWEIAT 209
>pdb|2G1T|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|C Chain C, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|D Chain D, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|3UE4|A Chain A, Structural And Spectroscopic Analysis Of The Kinase
Inhibitor Bosutinib Binding To The Abl Tyrosine Kinase
Domain
pdb|3UE4|B Chain B, Structural And Spectroscopic Analysis Of The Kinase
Inhibitor Bosutinib Binding To The Abl Tyrosine Kinase
Domain
Length = 287
Score = 81.3 bits (199), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 62/191 (32%), Positives = 100/191 (52%), Gaps = 21/191 (10%)
Query: 95 NKLGEGGFGPVYKGVLKKGD-EIAVKRLPGRSGQGLREMKNEASVIAKVQHKNLVRLLGC 153
+KLG G +G VY+GV KK +AVK L + + + E EA+V+ +++H NLV+LLG
Sbjct: 21 HKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME-VEEFLKEAAVMKEIKHPNLVQLLGV 79
Query: 154 CIDKDEKILIYEYMPNKSLDFFLFDPTKR-----MLLDWSANYSSR-------------L 195
C + +I E+M +L +L + ++ +LL + SS L
Sbjct: 80 CTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKKNFIHRDL 139
Query: 196 KVSNILLDKDINPKISDFGMARICGGNELQANTSRIVGTYGYMSPEYAIQGIFSIKSDVF 255
N L+ ++ K++DFG++R+ G+ A+ + +PE FSIKSDV+
Sbjct: 140 AARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPI-KWTAPESLAYNKFSIKSDVW 198
Query: 256 SFGVLLLEIVS 266
+FGVLL EI +
Sbjct: 199 AFGVLLWEIAT 209
>pdb|2V7A|A Chain A, Crystal Structure Of The T315i Abl Mutant In Complex With
The Inhibitor Pha-739358
pdb|2V7A|B Chain B, Crystal Structure Of The T315i Abl Mutant In Complex With
The Inhibitor Pha-739358
Length = 286
Score = 81.3 bits (199), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 62/191 (32%), Positives = 100/191 (52%), Gaps = 21/191 (10%)
Query: 95 NKLGEGGFGPVYKGVLKKGD-EIAVKRLPGRSGQGLREMKNEASVIAKVQHKNLVRLLGC 153
+KLG G +G VY+GV KK +AVK L + + + E EA+V+ +++H NLV+LLG
Sbjct: 20 HKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME-VEEFLKEAAVMKEIKHPNLVQLLGV 78
Query: 154 CIDKDEKILIYEYMPNKSLDFFLFDPTKR-----MLLDWSANYSSR-------------L 195
C + +I E+M +L +L + ++ +LL + SS L
Sbjct: 79 CTREPPFYIIIEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKKNFIHRDL 138
Query: 196 KVSNILLDKDINPKISDFGMARICGGNELQANTSRIVGTYGYMSPEYAIQGIFSIKSDVF 255
N L+ ++ K++DFG++R+ G+ A+ + +PE FSIKSDV+
Sbjct: 139 AARNCLVGENHLVKVADFGLSRLMTGDTXTAHAGAKFPI-KWTAPESLAYNKFSIKSDVW 197
Query: 256 SFGVLLLEIVS 266
+FGVLL EI +
Sbjct: 198 AFGVLLWEIAT 208
>pdb|2QOH|A Chain A, Crystal Structure Of Abl Kinase Bound With Ppy-a
pdb|2QOH|B Chain B, Crystal Structure Of Abl Kinase Bound With Ppy-a
pdb|3KF4|A Chain A, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KF4|B Chain B, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KFA|A Chain A, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KFA|B Chain B, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
Length = 288
Score = 81.3 bits (199), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 62/191 (32%), Positives = 100/191 (52%), Gaps = 21/191 (10%)
Query: 95 NKLGEGGFGPVYKGVLKKGD-EIAVKRLPGRSGQGLREMKNEASVIAKVQHKNLVRLLGC 153
+KLG G +G VY+GV KK +AVK L + + + E EA+V+ +++H NLV+LLG
Sbjct: 19 HKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME-VEEFLKEAAVMKEIKHPNLVQLLGV 77
Query: 154 CIDKDEKILIYEYMPNKSLDFFLFDPTKR-----MLLDWSANYSSR-------------L 195
C + +I E+M +L +L + ++ +LL + SS L
Sbjct: 78 CTREPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKKNFIHRDL 137
Query: 196 KVSNILLDKDINPKISDFGMARICGGNELQANTSRIVGTYGYMSPEYAIQGIFSIKSDVF 255
N L+ ++ K++DFG++R+ G+ A+ + +PE FSIKSDV+
Sbjct: 138 AARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPI-KWTAPESLAYNKFSIKSDVW 196
Query: 256 SFGVLLLEIVS 266
+FGVLL EI +
Sbjct: 197 AFGVLLWEIAT 207
>pdb|3PYY|A Chain A, Discovery And Characterization Of A Cell-Permeable,
Small-Molecule C- Abl Kinase Activator That Binds To The
Myristoyl Binding Site
pdb|3PYY|B Chain B, Discovery And Characterization Of A Cell-Permeable,
Small-Molecule C- Abl Kinase Activator That Binds To The
Myristoyl Binding Site
Length = 298
Score = 81.3 bits (199), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 62/191 (32%), Positives = 100/191 (52%), Gaps = 21/191 (10%)
Query: 95 NKLGEGGFGPVYKGVLKKGD-EIAVKRLPGRSGQGLREMKNEASVIAKVQHKNLVRLLGC 153
+KLG G +G VY+GV KK +AVK L + + + E EA+V+ +++H NLV+LLG
Sbjct: 32 HKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME-VEEFLKEAAVMKEIKHPNLVQLLGV 90
Query: 154 CIDKDEKILIYEYMPNKSLDFFLFDPTKR-----MLLDWSANYSSR-------------L 195
C + +I E+M +L +L + ++ +LL + SS L
Sbjct: 91 CTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKKNFIHRDL 150
Query: 196 KVSNILLDKDINPKISDFGMARICGGNELQANTSRIVGTYGYMSPEYAIQGIFSIKSDVF 255
N L+ ++ K++DFG++R+ G+ A+ + +PE FSIKSDV+
Sbjct: 151 AARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPI-KWTAPESLAYNKFSIKSDVW 209
Query: 256 SFGVLLLEIVS 266
+FGVLL EI +
Sbjct: 210 AFGVLLWEIAT 220
>pdb|2F4J|A Chain A, Structure Of The Kinase Domain Of An Imatinib-Resistant
Abl Mutant In Complex With The Aurora Kinase Inhibitor
Vx-680
Length = 287
Score = 79.7 bits (195), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 62/191 (32%), Positives = 99/191 (51%), Gaps = 21/191 (10%)
Query: 95 NKLGEGGFGPVYKGVLKKGD-EIAVKRLPGRSGQGLREMKNEASVIAKVQHKNLVRLLGC 153
+KLG G +G VY+GV KK +AVK L + + + E EA+V+ +++H NLV+LLG
Sbjct: 20 HKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME-VEEFLKEAAVMKEIKHPNLVQLLGV 78
Query: 154 CIDKDEKILIYEYMPNKSLDFFLFDPTKR-----MLLDWSANYSSR-------------L 195
C + +I E+M +L +L + ++ +LL + SS L
Sbjct: 79 CTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKKNFIHRDL 138
Query: 196 KVSNILLDKDINPKISDFGMARICGGNELQANTSRIVGTYGYMSPEYAIQGIFSIKSDVF 255
N L+ ++ K++DFG++R+ G+ A + +PE FSIKSDV+
Sbjct: 139 AARNCLVGENHLVKVADFGLSRLMTGDTYTAPAGAKFPI-KWTAPESLAYNKFSIKSDVW 197
Query: 256 SFGVLLLEIVS 266
+FGVLL EI +
Sbjct: 198 AFGVLLWEIAT 208
>pdb|2G2F|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2F|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2H|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2H|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2I|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2I|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
Length = 287
Score = 79.7 bits (195), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 62/191 (32%), Positives = 99/191 (51%), Gaps = 21/191 (10%)
Query: 95 NKLGEGGFGPVYKGVLKKGD-EIAVKRLPGRSGQGLREMKNEASVIAKVQHKNLVRLLGC 153
+KLG G +G VY+GV KK +AVK L + + + E EA+V+ +++H NLV+LLG
Sbjct: 21 HKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME-VEEFLKEAAVMKEIKHPNLVQLLGV 79
Query: 154 CIDKDEKILIYEYMPNKSLDFFLFDPTKR-----MLLDWSANYSSR-------------L 195
C + +I E+M +L +L + ++ +LL + SS L
Sbjct: 80 CTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKKNFIHRDL 139
Query: 196 KVSNILLDKDINPKISDFGMARICGGNELQANTSRIVGTYGYMSPEYAIQGIFSIKSDVF 255
N L+ ++ K++DFG++R+ G+ A + +PE FSIKSDV+
Sbjct: 140 AARNCLVGENHLVKVADFGLSRLMTGDTYTAPAGAKFPI-KWTAPESLAYNKFSIKSDVW 198
Query: 256 SFGVLLLEIVS 266
+FGVLL EI +
Sbjct: 199 AFGVLLWEIAT 209
>pdb|3DTC|A Chain A, Crystal Structure Of Mixed-Lineage Kinase Mlk1 Complexed
With Compound 16
Length = 271
Score = 78.2 bits (191), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 65/205 (31%), Positives = 99/205 (48%), Gaps = 41/205 (20%)
Query: 97 LGEGGFGPVYKGVLKKGDEIAVKRL---PGRS-GQGLREMKNEASVIAKVQHKNLVRLLG 152
+G GGFG VY+ GDE+AVK P Q + ++ EA + A ++H N++ L G
Sbjct: 15 IGIGGFGKVYRA-FWIGDEVAVKAARHDPDEDISQTIENVRQEAKLFAMLKHPNIIALRG 73
Query: 153 CCIDKDEKILIYEYMPNKSLDFFLFDPTKRM----LLDWSA------NY----------S 192
C+ + L+ E+ L+ L KR+ L++W+ NY
Sbjct: 74 VCLKEPNLCLVMEFARGGPLNRVL--SGKRIPPDILVNWAVQIARGMNYLHDEAIVPIIH 131
Query: 193 SRLKVSNILLDKDINP--------KISDFGMARICGGNELQANTS-RIVGTYGYMSPEYA 243
LK SNIL+ + + KI+DFG+AR E T G Y +M+PE
Sbjct: 132 RDLKSSNILILQKVENGDLSNKILKITDFGLAR-----EWHRTTKMSAAGAYAWMAPEVI 186
Query: 244 IQGIFSIKSDVFSFGVLLLEIVSGK 268
+FS SDV+S+GVLL E+++G+
Sbjct: 187 RASMFSKGSDVWSYGVLLWELLTGE 211
>pdb|3MIY|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Sunitinib
pdb|3MIY|B Chain B, X-Ray Crystal Structure Of Itk Complexed With Sunitinib
pdb|3MJ1|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Inhibitor
Ro5191614
pdb|3MJ2|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Inhibitor
Bms-509744
Length = 266
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 79/273 (28%), Positives = 124/273 (45%), Gaps = 42/273 (15%)
Query: 95 NKLGEGGFGPVYKGVLKKGDEIAVKRLPGRSGQGLRE-MKNEASVIAKVQHKNLVRLLGC 153
++G G FG V+ G D++A+K + R G E EA V+ K+ H LV+L G
Sbjct: 13 QEIGSGQFGLVHLGYWLNKDKVAIKTI--REGAMSEEDFIEEAEVMMKLSHPKLVQLYGV 70
Query: 154 CIDKDEKILIYEYMPNKSLDFFL----------------FDPTKRMLLDWSANYSSR-LK 196
C+++ L++E+M + L +L D + M A+ R L
Sbjct: 71 CLEQAPICLVFEFMEHGCLSDYLRTQRGLFAAETLLGMCLDVCEGMAYLEEASVIHRDLA 130
Query: 197 VSNILLDKDINPKISDFGMARICGGNELQANTSRIVGT---YGYMSPEYAIQGIFSIKSD 253
N L+ ++ K+SDFGM R ++ ++T GT + SPE +S KSD
Sbjct: 131 ARNCLVGENQVIKVSDFGMTRFVLDDQYTSST----GTKFPVKWASPEVFSFSRYSSKSD 186
Query: 254 VFSFGVLLLEIVSGKKTTGFYRTDSLTLLGYAWDLWTSNRTLELIDPILEDEYSSKHMLL 313
V+SFGVL+ E+ S K R++S + D+ T R L P L +S H+
Sbjct: 187 VWSFGVLMWEVFSEGKIPYENRSNSEVVE----DISTGFR---LYKPRL----ASTHVY- 234
Query: 314 RYVNIALLCVQESADDRPTMNEVVSMLTDEAAA 346
I C +E +DRP + ++ L AA+
Sbjct: 235 ---QIMNHCWKERPEDRPAFSRLLRQLAAIAAS 264
>pdb|2HEL|A Chain A, Crystal Structure Of A Mutant Epha4 Kinase Domain (Y742a)
Length = 306
Score = 76.6 bits (187), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 82/301 (27%), Positives = 136/301 (45%), Gaps = 61/301 (20%)
Query: 79 FSFSSVSTATNKFS---DAN------KLGEGGFGPVYKGVLKKGDE----IAVKRL-PGR 124
F+F + A +F+ DA+ +G G FG V G LK + +A+K L G
Sbjct: 10 FTFEDPNQAVREFAKEIDASCIKIEKVIGVGEFGEVCSGRLKVPGKREICVAIKTLKAGY 69
Query: 125 SGQGLREMKNEASVIAKVQHKNLVRLLGCCIDKDEKILIYEYMPNKSLDFFLFDPTKRM- 183
+ + R+ +EAS++ + H N++ L G ++I EYM N SLD FL R
Sbjct: 70 TDKQRRDFLSEASIMGQFDHPNIIHLEGVVTKCKPVMIITEYMENGSLDAFLRKNDGRFT 129
Query: 184 -----------------LLDWSANYSSRLKVSNILLDKDINPKISDFGMARICGGNELQA 226
L D SA + L NIL++ ++ K+SDFGM+R+ + A
Sbjct: 130 VIQLVGMLRGIGSGMKYLSDMSAVHRD-LAARNILVNSNLVCKVSDFGMSRVLEDDPEAA 188
Query: 227 NTSRIVGT-YGYMSPEYAIQGIFSIKSDVFSFGVLLLEIVS-GKKTTGFYRTDSLTLLGY 284
T+R + +PE F+ SDV+S+G+++ E++S G++
Sbjct: 189 YTTRGGKIPIRWTAPEAIAYRKFTSASDVWSYGIVMWEVMSYGERPY------------- 235
Query: 285 AWDLWTSNRTLELID-----PILEDEYSSKHMLLRYVNIALLCVQESADDRPTMNEVVSM 339
WD+ ++ ++ I+ P D + H L+ L C Q+ DRP ++V+M
Sbjct: 236 -WDM-SNQDVIKAIEEGYRLPPPMDCPIALHQLM------LDCWQKERSDRPKFGQIVNM 287
Query: 340 L 340
L
Sbjct: 288 L 288
>pdb|1SM2|A Chain A, Crystal Structure Of The Phosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SM2|B Chain B, Crystal Structure Of The Phosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNU|A Chain A, Crystal Structure Of The Unphosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNU|B Chain B, Crystal Structure Of The Unphosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNX|A Chain A, Crystal Structure Of Apo Interleukin-2 Tyrosine Kinase
Catalytic Domain
pdb|1SNX|B Chain B, Crystal Structure Of Apo Interleukin-2 Tyrosine Kinase
Catalytic Domain
Length = 264
Score = 75.9 bits (185), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 77/274 (28%), Positives = 124/274 (45%), Gaps = 42/274 (15%)
Query: 94 ANKLGEGGFGPVYKGVLKKGDEIAVKRLPGRSGQGLRE-MKNEASVIAKVQHKNLVRLLG 152
++G G FG V+ G D++A+K + R G E EA V+ K+ H LV+L G
Sbjct: 10 VQEIGSGQFGLVHLGYWLNKDKVAIKTI--REGAMSEEDFIEEAEVMMKLSHPKLVQLYG 67
Query: 153 CCIDKDEKILIYEYMPNKSLDFFL----------------FDPTKRM-LLDWSANYSSRL 195
C+++ L++E+M + L +L D + M L+ + L
Sbjct: 68 VCLEQAPICLVFEFMEHGCLSDYLRTQRGLFAAETLLGMCLDVCEGMAYLEEACVIHRDL 127
Query: 196 KVSNILLDKDINPKISDFGMARICGGNELQANTSRIVGT---YGYMSPEYAIQGIFSIKS 252
N L+ ++ K+SDFGM R ++ ++T GT + SPE +S KS
Sbjct: 128 AARNCLVGENQVIKVSDFGMTRFVLDDQYTSST----GTKFPVKWASPEVFSFSRYSSKS 183
Query: 253 DVFSFGVLLLEIVSGKKTTGFYRTDSLTLLGYAWDLWTSNRTLELIDPILEDEYSSKHML 312
DV+SFGVL+ E+ S K R++S + D+ T R L P L +S H+
Sbjct: 184 DVWSFGVLMWEVFSEGKIPYENRSNSEVVE----DISTGFR---LYKPRL----ASTHVY 232
Query: 313 LRYVNIALLCVQESADDRPTMNEVVSMLTDEAAA 346
I C +E +DRP + ++ L + A +
Sbjct: 233 ----QIMNHCWKERPEDRPAFSRLLRQLAEIAES 262
>pdb|3V5J|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 090
pdb|3V5J|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 090
pdb|3V5L|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|C Chain C, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|D Chain D, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V8T|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 477
pdb|3V8T|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 477
pdb|3V8W|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 469
pdb|3V8W|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 469
Length = 266
Score = 75.9 bits (185), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 77/274 (28%), Positives = 124/274 (45%), Gaps = 42/274 (15%)
Query: 94 ANKLGEGGFGPVYKGVLKKGDEIAVKRLPGRSGQGLRE-MKNEASVIAKVQHKNLVRLLG 152
++G G FG V+ G D++A+K + R G E EA V+ K+ H LV+L G
Sbjct: 12 VQEIGSGQFGLVHLGYWLNKDKVAIKTI--REGAMSEEDFIEEAEVMMKLSHPKLVQLYG 69
Query: 153 CCIDKDEKILIYEYMPNKSLDFFL----------------FDPTKRM-LLDWSANYSSRL 195
C+++ L++E+M + L +L D + M L+ + L
Sbjct: 70 VCLEQAPICLVFEFMEHGCLSDYLRTQRGLFAAETLLGMCLDVCEGMAYLEEACVIHRDL 129
Query: 196 KVSNILLDKDINPKISDFGMARICGGNELQANTSRIVGT---YGYMSPEYAIQGIFSIKS 252
N L+ ++ K+SDFGM R ++ ++T GT + SPE +S KS
Sbjct: 130 AARNCLVGENQVIKVSDFGMTRFVLDDQYTSST----GTKFPVKWASPEVFSFSRYSSKS 185
Query: 253 DVFSFGVLLLEIVSGKKTTGFYRTDSLTLLGYAWDLWTSNRTLELIDPILEDEYSSKHML 312
DV+SFGVL+ E+ S K R++S + D+ T R L P L +S H+
Sbjct: 186 DVWSFGVLMWEVFSEGKIPYENRSNSEVVE----DISTGFR---LYKPRL----ASTHVY 234
Query: 313 LRYVNIALLCVQESADDRPTMNEVVSMLTDEAAA 346
I C +E +DRP + ++ L + A +
Sbjct: 235 ----QIMNHCWKERPEDRPAFSRLLRQLAEIAES 264
>pdb|4HCT|A Chain A, Crystal Structure Of Itk In Complex With Compound 52
pdb|4HCU|A Chain A, Crystal Structure Of Itk In Complext With Compound 40
pdb|4HCV|A Chain A, Crystal Structure Of Itk In Complex With Compound 53
Length = 269
Score = 75.5 bits (184), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 77/274 (28%), Positives = 124/274 (45%), Gaps = 42/274 (15%)
Query: 94 ANKLGEGGFGPVYKGVLKKGDEIAVKRLPGRSGQGLRE-MKNEASVIAKVQHKNLVRLLG 152
++G G FG V+ G D++A+K + R G E EA V+ K+ H LV+L G
Sbjct: 15 VQEIGSGQFGLVHLGYWLNKDKVAIKTI--REGAMSEEDFIEEAEVMMKLSHPKLVQLYG 72
Query: 153 CCIDKDEKILIYEYMPNKSLDFFL----------------FDPTKRM-LLDWSANYSSRL 195
C+++ L++E+M + L +L D + M L+ + L
Sbjct: 73 VCLEQAPICLVFEFMEHGCLSDYLRTQRGLFAAETLLGMCLDVCEGMAYLEEACVIHRDL 132
Query: 196 KVSNILLDKDINPKISDFGMARICGGNELQANTSRIVGT---YGYMSPEYAIQGIFSIKS 252
N L+ ++ K+SDFGM R ++ ++T GT + SPE +S KS
Sbjct: 133 AARNCLVGENQVIKVSDFGMTRFVLDDQYTSST----GTKFPVKWASPEVFSFSRYSSKS 188
Query: 253 DVFSFGVLLLEIVSGKKTTGFYRTDSLTLLGYAWDLWTSNRTLELIDPILEDEYSSKHML 312
DV+SFGVL+ E+ S K R++S + D+ T R L P L +S H+
Sbjct: 189 DVWSFGVLMWEVFSEGKIPYENRSNSEVVE----DISTGFR---LYKPRL----ASTHVY 237
Query: 313 LRYVNIALLCVQESADDRPTMNEVVSMLTDEAAA 346
I C +E +DRP + ++ L + A +
Sbjct: 238 ----QIMNHCWRERPEDRPAFSRLLRQLAEIAES 267
>pdb|3DZQ|A Chain A, Human Epha3 Kinase Domain In Complex With Inhibitor
Awl-Ii- 38.3
pdb|4G2F|A Chain A, Human Epha3 Kinase Domain In Complex With Compound 7
pdb|4GK2|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 66
pdb|4GK3|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 87
pdb|4GK4|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 90
Length = 361
Score = 75.5 bits (184), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 85/312 (27%), Positives = 141/312 (45%), Gaps = 63/312 (20%)
Query: 58 LPVNSKQTKRSKKKEVDQLPLFSFSSVSTATNKFSDANKLGEGGFGPVYKGVLK----KG 113
+P S QT KE+D ATN S +G G FG V G LK K
Sbjct: 15 VPRGSTQTVHEFAKELD------------ATN-ISIDKVVGAGEFGEVCSGRLKLPSKKE 61
Query: 114 DEIAVKRLP-GRSGQGLREMKNEASVIAKVQHKNLVRLLGCCIDKDEKILIYEYMPNKSL 172
+A+K L G + + R+ EAS++ + H N++RL G +++ EYM N SL
Sbjct: 62 ISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSL 121
Query: 173 DFFLFDPTKR--------MLLDWSA--------NYSSR-LKVSNILLDKDINPKISDFGM 215
D FL + ML ++ Y R L NIL++ ++ K+SDFG+
Sbjct: 122 DSFLRKHDAQFTVIQLVGMLRGIASGMKYLSDMGYVHRDLAARNILINSNLVCKVSDFGL 181
Query: 216 ARICGGNELQANTSRIVGT-YGYMSPEYAIQGIFSIKSDVFSFGVLLLEIVS-GKKTTGF 273
+R+ + A T+R + SPE F+ SDV+S+G++L E++S G++
Sbjct: 182 SRVLEDDPEAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPY-- 239
Query: 274 YRTDSLTLLGYAWDLWTSNRTLELID-----PILEDEYSSKHMLLRYVNIALLCVQESAD 328
W++ ++ ++ +D P D ++ + L+ L C Q+ +
Sbjct: 240 ------------WEM-SNQDVIKAVDEGYRLPPPMDCPAALYQLM------LDCWQKDRN 280
Query: 329 DRPTMNEVVSML 340
+RP ++VS+L
Sbjct: 281 NRPKFEQIVSIL 292
>pdb|4AOJ|A Chain A, Human Trka In Complex With The Inhibitor Az-23
pdb|4AOJ|B Chain B, Human Trka In Complex With The Inhibitor Az-23
pdb|4AOJ|C Chain C, Human Trka In Complex With The Inhibitor Az-23
Length = 329
Score = 75.5 bits (184), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 73/292 (25%), Positives = 124/292 (42%), Gaps = 54/292 (18%)
Query: 96 KLGEGGFGPVY----KGVLKKGDE--IAVKRLPGRSGQGLREMKNEASVIAKVQHKNLVR 149
+LGEG FG V+ +L + D+ +AVK L S ++ + EA ++ +QH+++VR
Sbjct: 48 ELGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQREAELLTMLQHQHIVR 107
Query: 150 LLGCCIDKDEKILIYEYMPNKSLDFFL--FDPTKRMLLDW-------------------- 187
G C + ++++EYM + L+ FL P ++L
Sbjct: 108 FFGVCTEGRPLLMVFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAVASQV 167
Query: 188 --------SANYSSR-LKVSNILLDKDINPKISDFGMARICGGNELQANTSRIVGTYGYM 238
++ R L N L+ + + KI DFGM+R + R + +M
Sbjct: 168 AAGMVYLAGLHFVHRDLATRNCLVGQGLVVKIGDFGMSRDIYSTDYYRVGGRTMLPIRWM 227
Query: 239 SPEYAIQGIFSIKSDVFSFGVLLLEIVSGKKTTGFYRTDSLTLLGYAWDLWTSNRTLELI 298
PE + F+ +SDV+SFGV+L EI + K + +++ + D T R LE
Sbjct: 228 PPESILYRKFTTESDVWSFGVVLWEIFTYGKQPWYQLSNTEAI-----DCITQGRELERP 282
Query: 299 DPILEDEYSSKHMLLRYVNIALLCVQESADDRPTMNEVVSMLTDEAAALFPP 350
+ Y+ I C Q R ++ +V + L +A A PP
Sbjct: 283 RACPPEVYA----------IMRGCWQREPQQRHSIKDVHARL--QALAQAPP 322
>pdb|3BBT|B Chain B, Crystal Structure Of The Erbb4 Kinase In Complex With
Lapatinib
pdb|3BBT|D Chain D, Crystal Structure Of The Erbb4 Kinase In Complex With
Lapatinib
pdb|3BBW|B Chain B, Crystal Structure Of The Erbb4 Kinase In Its Inactive
Conformation
pdb|3BBW|A Chain A, Crystal Structure Of The Erbb4 Kinase In Its Inactive
Conformation
pdb|3BCE|A Chain A, Crystal Structure Of The Erbb4 Kinase
pdb|3BCE|B Chain B, Crystal Structure Of The Erbb4 Kinase
pdb|3BCE|C Chain C, Crystal Structure Of The Erbb4 Kinase
Length = 328
Score = 75.1 bits (183), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 59/202 (29%), Positives = 99/202 (49%), Gaps = 26/202 (12%)
Query: 97 LGEGGFGPVYKGVLKKGDE-----IAVKRLPGRSG-QGLREMKNEASVIAKVQHKNLVRL 150
LG G FG VYKG+ E +A+K L +G + E +EA ++A + H +LVRL
Sbjct: 23 LGSGAFGTVYKGIWVPEGETVKIPVAIKILNETTGPKANVEFMDEALIMASMDHPHLVRL 82
Query: 151 LGCCIDKDEKILIYEYMPNKSLDFFLFDPT----KRMLLDWSANYSS------------- 193
LG C+ + L+ + MP+ L ++ + ++LL+W +
Sbjct: 83 LGVCLSPTIQ-LVTQLMPHGCLLEYVHEHKDNIGSQLLLNWCVQIAKGMMYLEERRLVHR 141
Query: 194 RLKVSNILLDKDINPKISDFGMARICGGNELQANTSRIVGTYGYMSPEYAIQGIFSIKSD 253
L N+L+ + KI+DFG+AR+ G+E + N +M+ E F+ +SD
Sbjct: 142 DLAARNVLVKSPNHVKITDFGLARLLEGDEKEYNADGGKMPIKWMALECIHYRKFTHQSD 201
Query: 254 VFSFGVLLLEIVS--GKKTTGF 273
V+S+GV + E+++ GK G
Sbjct: 202 VWSYGVTIWELMTFGGKPYDGI 223
>pdb|4F0I|A Chain A, Crystal Structure Of Apo Trka
pdb|4F0I|B Chain B, Crystal Structure Of Apo Trka
Length = 300
Score = 75.1 bits (183), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 73/292 (25%), Positives = 124/292 (42%), Gaps = 54/292 (18%)
Query: 96 KLGEGGFGPVY----KGVLKKGDE--IAVKRLPGRSGQGLREMKNEASVIAKVQHKNLVR 149
+LGEG FG V+ +L + D+ +AVK L S ++ + EA ++ +QH+++VR
Sbjct: 19 ELGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQREAELLTMLQHQHIVR 78
Query: 150 LLGCCIDKDEKILIYEYMPNKSLDFFL--FDPTKRMLLDW-------------------- 187
G C + ++++EYM + L+ FL P ++L
Sbjct: 79 FFGVCTEGRPLLMVFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAVASQV 138
Query: 188 --------SANYSSR-LKVSNILLDKDINPKISDFGMARICGGNELQANTSRIVGTYGYM 238
++ R L N L+ + + KI DFGM+R + R + +M
Sbjct: 139 AAGMVYLAGLHFVHRDLATRNCLVGQGLVVKIGDFGMSRDIYSTDYYRVGGRTMLPIRWM 198
Query: 239 SPEYAIQGIFSIKSDVFSFGVLLLEIVSGKKTTGFYRTDSLTLLGYAWDLWTSNRTLELI 298
PE + F+ +SDV+SFGV+L EI + K + +++ + D T R LE
Sbjct: 199 PPESILYRKFTTESDVWSFGVVLWEIFTYGKQPWYQLSNTEAI-----DCITQGRELERP 253
Query: 299 DPILEDEYSSKHMLLRYVNIALLCVQESADDRPTMNEVVSMLTDEAAALFPP 350
+ Y+ I C Q R ++ +V + L +A A PP
Sbjct: 254 RACPPEVYA----------IMRGCWQREPQQRHSIKDVHARL--QALAQAPP 293
>pdb|4GT5|A Chain A, Crystal Structure Of The Inactive Trka Kinase Domain
Length = 306
Score = 75.1 bits (183), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 73/292 (25%), Positives = 124/292 (42%), Gaps = 54/292 (18%)
Query: 96 KLGEGGFGPVY----KGVLKKGDE--IAVKRLPGRSGQGLREMKNEASVIAKVQHKNLVR 149
+LGEG FG V+ +L + D+ +AVK L S ++ + EA ++ +QH+++VR
Sbjct: 25 ELGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQREAELLTMLQHQHIVR 84
Query: 150 LLGCCIDKDEKILIYEYMPNKSLDFFL--FDPTKRMLLDW-------------------- 187
G C + ++++EYM + L+ FL P ++L
Sbjct: 85 FFGVCTEGRPLLMVFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAVASQV 144
Query: 188 --------SANYSSR-LKVSNILLDKDINPKISDFGMARICGGNELQANTSRIVGTYGYM 238
++ R L N L+ + + KI DFGM+R + R + +M
Sbjct: 145 AAGMVYLAGLHFVHRDLATRNCLVGQGLVVKIGDFGMSRDIYSTDYYRVGGRTMLPIRWM 204
Query: 239 SPEYAIQGIFSIKSDVFSFGVLLLEIVSGKKTTGFYRTDSLTLLGYAWDLWTSNRTLELI 298
PE + F+ +SDV+SFGV+L EI + K + +++ + D T R LE
Sbjct: 205 PPESILYRKFTTESDVWSFGVVLWEIFTYGKQPWYQLSNTEAI-----DCITQGRELERP 259
Query: 299 DPILEDEYSSKHMLLRYVNIALLCVQESADDRPTMNEVVSMLTDEAAALFPP 350
+ Y+ I C Q R ++ +V + L +A A PP
Sbjct: 260 RACPPEVYA----------IMRGCWQREPQQRHSIKDVHARL--QALAQAPP 299
>pdb|3V5Q|A Chain A, Discovery Of A Selective Trk Inhibitor With Efficacy In
Rodent Cancer Tumor Models
pdb|3V5Q|B Chain B, Discovery Of A Selective Trk Inhibitor With Efficacy In
Rodent Cancer Tumor Models
Length = 297
Score = 74.7 bits (182), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 70/283 (24%), Positives = 118/283 (41%), Gaps = 53/283 (18%)
Query: 96 KLGEGGFGPVYKGVL------KKGDEIAVKRLPGRSGQGLREMKNEASVIAKVQHKNLVR 149
+LGEG FG V+ K +AVK L + ++ + EA ++ +QH+++V+
Sbjct: 22 ELGEGAFGKVFLAECYNLSPTKDKMLVAVKALKDPTLAARKDFQREAELLTNLQHEHIVK 81
Query: 150 LLGCCIDKDEKILIYEYMPNKSLDFFL--FDPTKRMLLDW-------------------- 187
G C D D I+++EYM + L+ FL P +L+D
Sbjct: 82 FYGVCGDGDPLIMVFEYMKHGDLNKFLRAHGPDAMILVDGQPRQAKGELGLSQMLHIASQ 141
Query: 188 ---------SANYSSR-LKVSNILLDKDINPKISDFGMARICGGNELQANTSRIVGTYGY 237
S ++ R L N L+ ++ KI DFGM+R + + +
Sbjct: 142 IASGMVYLASQHFVHRDLATRNCLVGANLLVKIGDFGMSRDVYSTDYYRVGGHTMLPIRW 201
Query: 238 MSPEYAIQGIFSIKSDVFSFGVLLLEIVSGKKTTGFYRTDSLTLLGYAWDLWTSNRTLEL 297
M PE + F+ +SDV+SFGV+L EI + K F +++ + + T R LE
Sbjct: 202 MPPESIMYRKFTTESDVWSFGVILWEIFTYGKQPWFQLSNTEVI-----ECITQGRVLER 256
Query: 298 IDPILEDEYSSKHMLLRYVNIALLCVQESADDRPTMNEVVSML 340
++ Y ++ L C Q R + E+ +L
Sbjct: 257 PRVCPKEVY----------DVMLGCWQREPQQRLNIKEIYKIL 289
>pdb|2R4B|A Chain A, Erbb4 Kinase Domain Complexed With A Thienopyrimidine
Inhibitor
pdb|2R4B|B Chain B, Erbb4 Kinase Domain Complexed With A Thienopyrimidine
Inhibitor
Length = 321
Score = 74.7 bits (182), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 59/202 (29%), Positives = 99/202 (49%), Gaps = 26/202 (12%)
Query: 97 LGEGGFGPVYKGVLKKGDE-----IAVKRLPGRSG-QGLREMKNEASVIAKVQHKNLVRL 150
LG G FG VYKG+ E +A+K L +G + E +EA ++A + H +LVRL
Sbjct: 46 LGSGAFGTVYKGIWVPEGETVKIPVAIKILNETTGPKANVEFMDEALIMASMDHPHLVRL 105
Query: 151 LGCCIDKDEKILIYEYMPNKSLDFFLFDPT----KRMLLDWSANYSS------------- 193
LG C+ + L+ + MP+ L ++ + ++LL+W +
Sbjct: 106 LGVCLSPTIQ-LVTQLMPHGCLLEYVHEHKDNIGSQLLLNWCVQIAKGMMYLEERRLVHR 164
Query: 194 RLKVSNILLDKDINPKISDFGMARICGGNELQANTSRIVGTYGYMSPEYAIQGIFSIKSD 253
L N+L+ + KI+DFG+AR+ G+E + N +M+ E F+ +SD
Sbjct: 165 DLAARNVLVKSPNHVKITDFGLARLLEGDEKEYNADGGKMPIKWMALECIHYRKFTHQSD 224
Query: 254 VFSFGVLLLEIVS--GKKTTGF 273
V+S+GV + E+++ GK G
Sbjct: 225 VWSYGVTIWELMTFGGKPYDGI 246
>pdb|2QOK|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:s768a Triple Mutant
Length = 373
Score = 74.7 bits (182), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 80/292 (27%), Positives = 135/292 (46%), Gaps = 51/292 (17%)
Query: 78 LFSFSSVSTATNKFSDANKLGEGGFGPVYKGVLK----KGDEIAVKRLP-GRSGQGLREM 132
+ F+ ATN S +G G FG V G LK K +A+K L G + + R+
Sbjct: 35 VHEFAKELDATN-ISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDF 93
Query: 133 KNEASVIAKVQHKNLVRLLGCCIDKDEKILIYEYMPNKSLDFFLFDPTKR--------ML 184
EAS++ + H N++RL G +++ EYM N SLD FL + ML
Sbjct: 94 LGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGML 153
Query: 185 LDWSA--------NYSSR-LKVSNILLDKDINPKISDFGMARICGGNELQANTSRIVGT- 234
++ Y R L NIL++ ++ K+SDFG+AR+ + A T+R
Sbjct: 154 RGIASGMKYLSDMGYVHRDLAARNILINSNLVCKVSDFGLARVLEDDPEAAYTTRGGKIP 213
Query: 235 YGYMSPEYAIQGIFSIKSDVFSFGVLLLEIVS-GKKTTGFYRTDSLTLLGYAWDLWTSNR 293
+ SPE F+ SDV+S+G++L E++S G++ W++ ++
Sbjct: 214 IRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPY--------------WEM-SNQD 258
Query: 294 TLELID-----PILEDEYSSKHMLLRYVNIALLCVQESADDRPTMNEVVSML 340
++ +D P D ++ + L+ L C Q+ ++RP ++VS+L
Sbjct: 259 VIKAVDEGYRLPPPMDCPAALYQLM------LDCWQKDRNNRPKFEQIVSIL 304
>pdb|1MQB|A Chain A, Crystal Structure Of Ephrin A2 (Epha2) Receptor Protein
Kinase
pdb|1MQB|B Chain B, Crystal Structure Of Ephrin A2 (Epha2) Receptor Protein
Kinase
Length = 333
Score = 74.7 bits (182), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 75/274 (27%), Positives = 128/274 (46%), Gaps = 51/274 (18%)
Query: 97 LGEGGFGPVYKGVLK-----KGDEIAVKRL-PGRSGQGLREMKNEASVIAKVQHKNLVRL 150
+G G FG VYKG+LK K +A+K L G + + + EA ++ + H N++RL
Sbjct: 52 IGAGEFGEVYKGMLKTSSGKKEVPVAIKTLKAGYTEKQRVDFLGEAGIMGQFSHHNIIRL 111
Query: 151 LGCCIDKDEKILIYEYMPNKSLDFFLFDPTKR--------MLLDWSA--------NYSSR 194
G ++I EYM N +LD FL + ML +A NY R
Sbjct: 112 EGVISKYKPMMIITEYMENGALDKFLREKDGEFSVLQLVGMLRGIAAGMKYLANMNYVHR 171
Query: 195 -LKVSNILLDKDINPKISDFGMARICGGN-ELQANTSRIVGTYGYMSPEYAIQGIFSIKS 252
L NIL++ ++ K+SDFG++R+ + E TS + +PE F+ S
Sbjct: 172 DLAARNILVNSNLVCKVSDFGLSRVLEDDPEATYTTSGGKIPIRWTAPEAISYRKFTSAS 231
Query: 253 DVFSFGVLLLEIVS-GKKTTGFYRTDSLTLLGYAWDLWTSNRTLELID-----PILEDEY 306
DV+SFG+++ E+++ G++ W+L +++ ++ I+ P D
Sbjct: 232 DVWSFGIVMWEVMTYGERPY--------------WEL-SNHEVMKAINDGFRLPTPMDCP 276
Query: 307 SSKHMLLRYVNIALLCVQESADDRPTMNEVVSML 340
S+ + L+ + C Q+ RP ++VS+L
Sbjct: 277 SAIYQLM------MQCWQQERARRPKFADIVSIL 304
>pdb|3QGW|A Chain A, Crystal Structure Of Itk Kinase Bound To An Inhibitor
pdb|3QGW|B Chain B, Crystal Structure Of Itk Kinase Bound To An Inhibitor
pdb|3QGY|A Chain A, Crystal Structure Of Itk Inhibitor Complex
pdb|3QGY|B Chain B, Crystal Structure Of Itk Inhibitor Complex
Length = 286
Score = 73.9 bits (180), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 75/273 (27%), Positives = 123/273 (45%), Gaps = 40/273 (14%)
Query: 94 ANKLGEGGFGPVYKGVLKKGDEIAVKRLPGRSGQGLREMKNEASVIAKVQHKNLVRLLGC 153
++G G FG V+ G D++A+K + S + EA V+ K+ H LV+L G
Sbjct: 32 VQEIGSGQFGLVHLGYWLNKDKVAIKTIKEGS-MSEDDFIEEAEVMMKLSHPKLVQLYGV 90
Query: 154 CIDKDEKILIYEYMPNKSLDFFL----------------FDPTKRM-LLDWSANYSSRLK 196
C+++ L++E+M + L +L D + M L+ + L
Sbjct: 91 CLEQAPICLVFEFMEHGCLSDYLRTQRGLFAAETLLGMCLDVCEGMAYLEEACVIHRDLA 150
Query: 197 VSNILLDKDINPKISDFGMARICGGNELQANTSRIVGT---YGYMSPEYAIQGIFSIKSD 253
N L+ ++ K+SDFGM R ++ ++T GT + SPE +S KSD
Sbjct: 151 ARNCLVGENQVIKVSDFGMTRFVLDDQYTSST----GTKFPVKWASPEVFSFSRYSSKSD 206
Query: 254 VFSFGVLLLEIVSGKKTTGFYRTDSLTLLGYAWDLWTSNRTLELIDPILEDEYSSKHMLL 313
V+SFGVL+ E+ S K R++S + D+ T R L P L +S H+
Sbjct: 207 VWSFGVLMWEVFSEGKIPYENRSNSEVVE----DISTGFR---LYKPRL----ASTHVY- 254
Query: 314 RYVNIALLCVQESADDRPTMNEVVSMLTDEAAA 346
I C +E +DRP + ++ L + A +
Sbjct: 255 ---QIMNHCWKERPEDRPAFSRLLRQLAEIAES 284
>pdb|3K54|A Chain A, Structures Of Human Bruton's Tyrosine Kinase In Active And
Inactive Conformations Suggests A Mechanism Of
Activation For Tec Family Kinases
Length = 283
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 78/266 (29%), Positives = 115/266 (43%), Gaps = 38/266 (14%)
Query: 96 KLGEGGFGPVYKGVLKKGDEIAVKRLPGRSGQGLREMKNEASVIAKVQHKNLVRLLGCCI 155
+LG G FG V G + ++A+K + S E EA V+ + H+ LV+L G C
Sbjct: 31 ELGTGQFGVVKYGKWRGQYDVAIKMIKEGS-MSEDEFIEEAKVMMNLSHEKLVQLYGVCT 89
Query: 156 DKDEKILIYEYMPNKSLDFFLFDPTKRM----LLDW------------SANYSSR-LKVS 198
+ +I EYM N L +L + R LL+ S + R L
Sbjct: 90 KQRPIFIITEYMANGCLLNYLREMRHRFQTQQLLEMCKDVCEAMEYLESKQFLHRDLAAR 149
Query: 199 NILLDKDINPKISDFGMARICGGNELQANTSRIVGTYG--YMSPEYAIQGIFSIKSDVFS 256
N L++ K+SDFG++R +E TS + + + PE + FS KSD+++
Sbjct: 150 NCLVNDQGVVKVSDFGLSRYVLDDE---ETSSVGSKFPVRWSPPEVLMYSKFSSKSDIWA 206
Query: 257 FGVLLLEIVSGKKTTGFYRTDSLTLLGYAWDLWTSNRTLELIDPILEDEYSSKHMLLRYV 316
FGVL+ EI S K T+S T A + L L P L E +
Sbjct: 207 FGVLMWEIYSLGKMPYERFTNSETAEHIA-------QGLRLYRPHLASE--------KVY 251
Query: 317 NIALLCVQESADDRPTMNEVVSMLTD 342
I C E AD+RPT ++S + D
Sbjct: 252 TIMYSCWHEKADERPTFKILLSNILD 277
>pdb|3T9T|A Chain A, Crystal Structure Of Btk Mutant (F435t,K596r) Complexed
With Imidazo[1,5-A]quinoxaline
Length = 267
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 77/274 (28%), Positives = 123/274 (44%), Gaps = 42/274 (15%)
Query: 94 ANKLGEGGFGPVYKGVLKKGDEIAVKRLPGRSGQGLRE-MKNEASVIAKVQHKNLVRLLG 152
++G G FG V+ G D++A+K + R G E EA V+ K+ H LV+L G
Sbjct: 13 VQEIGSGQFGLVHLGYWLNKDKVAIKTI--REGAMSEEDFIEEAEVMMKLSHPKLVQLYG 70
Query: 153 CCIDKDEKILIYEYMPNKSLDFFL----------------FDPTKRM-LLDWSANYSSRL 195
C+++ L+ E+M + L +L D + M L+ + L
Sbjct: 71 VCLEQAPICLVTEFMEHGCLSDYLRTQRGLFAAETLLGMCLDVCEGMAYLEEACVIHRDL 130
Query: 196 KVSNILLDKDINPKISDFGMARICGGNELQANTSRIVGT---YGYMSPEYAIQGIFSIKS 252
N L+ ++ K+SDFGM R ++ ++T GT + SPE +S KS
Sbjct: 131 AARNCLVGENQVIKVSDFGMTRFVLDDQYTSST----GTKFPVKWASPEVFSFSRYSSKS 186
Query: 253 DVFSFGVLLLEIVSGKKTTGFYRTDSLTLLGYAWDLWTSNRTLELIDPILEDEYSSKHML 312
DV+SFGVL+ E+ S K R++S + D+ T R L P L +S H+
Sbjct: 187 DVWSFGVLMWEVFSEGKIPYENRSNSEVVE----DISTGFR---LYKPRL----ASTHVY 235
Query: 313 LRYVNIALLCVQESADDRPTMNEVVSMLTDEAAA 346
I C +E +DRP + ++ L + A +
Sbjct: 236 ----QIMNHCWRERPEDRPAFSRLLRQLAEIAES 265
>pdb|3FXX|A Chain A, Human Epha3 Kinase And Juxtamembrane Region Bound To
Substrate Kqwdnye[ptyr]iw
pdb|3FY2|A Chain A, Human Epha3 Kinase And Juxtamembrane Region Bound To
Substrate Kqwdnyefiw
Length = 371
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 79/292 (27%), Positives = 135/292 (46%), Gaps = 51/292 (17%)
Query: 78 LFSFSSVSTATNKFSDANKLGEGGFGPVYKGVLK----KGDEIAVKRLP-GRSGQGLREM 132
+ F+ ATN S +G G FG V G LK K +A+K L G + + R+
Sbjct: 33 VHEFAKELDATN-ISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDF 91
Query: 133 KNEASVIAKVQHKNLVRLLGCCIDKDEKILIYEYMPNKSLDFFLFDPTKR--------ML 184
EAS++ + H N++RL G +++ EYM N SLD FL + ML
Sbjct: 92 LGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGML 151
Query: 185 LDWSA--------NYSSR-LKVSNILLDKDINPKISDFGMARICGGNELQANTSRIVGT- 234
++ Y R L NIL++ ++ K+SDFG++R+ + A T+R
Sbjct: 152 RGIASGMKYLSDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIP 211
Query: 235 YGYMSPEYAIQGIFSIKSDVFSFGVLLLEIVS-GKKTTGFYRTDSLTLLGYAWDLWTSNR 293
+ SPE F+ SDV+S+G++L E++S G++ W++ ++
Sbjct: 212 IRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERP--------------YWEM-SNQD 256
Query: 294 TLELID-----PILEDEYSSKHMLLRYVNIALLCVQESADDRPTMNEVVSML 340
++ +D P D ++ + L+ L C Q+ ++RP ++VS+L
Sbjct: 257 VIKAVDEGYRLPPPMDCPAALYQLM------LDCWQKDRNNRPKFEQIVSIL 302
>pdb|2QOF|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f Mutant
Length = 373
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 79/292 (27%), Positives = 135/292 (46%), Gaps = 51/292 (17%)
Query: 78 LFSFSSVSTATNKFSDANKLGEGGFGPVYKGVLK----KGDEIAVKRLP-GRSGQGLREM 132
+ F+ ATN S +G G FG V G LK K +A+K L G + + R+
Sbjct: 35 VHEFAKELDATN-ISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDF 93
Query: 133 KNEASVIAKVQHKNLVRLLGCCIDKDEKILIYEYMPNKSLDFFLFDPTKR--------ML 184
EAS++ + H N++RL G +++ EYM N SLD FL + ML
Sbjct: 94 LGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGML 153
Query: 185 LDWSA--------NYSSR-LKVSNILLDKDINPKISDFGMARICGGNELQANTSRIVGT- 234
++ Y R L NIL++ ++ K+SDFG++R+ + A T+R
Sbjct: 154 RGIASGMKYLSDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIP 213
Query: 235 YGYMSPEYAIQGIFSIKSDVFSFGVLLLEIVS-GKKTTGFYRTDSLTLLGYAWDLWTSNR 293
+ SPE F+ SDV+S+G++L E++S G++ W++ ++
Sbjct: 214 IRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERP--------------YWEM-SNQD 258
Query: 294 TLELID-----PILEDEYSSKHMLLRYVNIALLCVQESADDRPTMNEVVSML 340
++ +D P D ++ + L+ L C Q+ ++RP ++VS+L
Sbjct: 259 VIKAVDEGYRLPPPMDCPAALYQLM------LDCWQKDRNNRPKFEQIVSIL 304
>pdb|2QOD|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y602f Mutant
Length = 373
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 79/292 (27%), Positives = 135/292 (46%), Gaps = 51/292 (17%)
Query: 78 LFSFSSVSTATNKFSDANKLGEGGFGPVYKGVLK----KGDEIAVKRLP-GRSGQGLREM 132
+ F+ ATN S +G G FG V G LK K +A+K L G + + R+
Sbjct: 35 VHEFAKELDATN-ISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDF 93
Query: 133 KNEASVIAKVQHKNLVRLLGCCIDKDEKILIYEYMPNKSLDFFLFDPTKR--------ML 184
EAS++ + H N++RL G +++ EYM N SLD FL + ML
Sbjct: 94 LGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGML 153
Query: 185 LDWSA--------NYSSR-LKVSNILLDKDINPKISDFGMARICGGNELQANTSRIVGT- 234
++ Y R L NIL++ ++ K+SDFG++R+ + A T+R
Sbjct: 154 RGIASGMKYLSDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIP 213
Query: 235 YGYMSPEYAIQGIFSIKSDVFSFGVLLLEIVS-GKKTTGFYRTDSLTLLGYAWDLWTSNR 293
+ SPE F+ SDV+S+G++L E++S G++ W++ ++
Sbjct: 214 IRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERP--------------YWEM-SNQD 258
Query: 294 TLELID-----PILEDEYSSKHMLLRYVNIALLCVQESADDRPTMNEVVSML 340
++ +D P D ++ + L+ L C Q+ ++RP ++VS+L
Sbjct: 259 VIKAVDEGYRLPPPMDCPAALYQLM------LDCWQKDRNNRPKFEQIVSIL 304
>pdb|2GSF|A Chain A, The Human Epha3 Receptor Tyrosine Kinase And Juxtamembrane
Region
pdb|2QO2|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Dephosphorylated, Apo Structure
pdb|2QO9|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Phosphorylated, Amp-pnp Bound
Length = 373
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 79/292 (27%), Positives = 135/292 (46%), Gaps = 51/292 (17%)
Query: 78 LFSFSSVSTATNKFSDANKLGEGGFGPVYKGVLK----KGDEIAVKRLP-GRSGQGLREM 132
+ F+ ATN S +G G FG V G LK K +A+K L G + + R+
Sbjct: 35 VHEFAKELDATN-ISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDF 93
Query: 133 KNEASVIAKVQHKNLVRLLGCCIDKDEKILIYEYMPNKSLDFFLFDPTKR--------ML 184
EAS++ + H N++RL G +++ EYM N SLD FL + ML
Sbjct: 94 LGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGML 153
Query: 185 LDWSA--------NYSSR-LKVSNILLDKDINPKISDFGMARICGGNELQANTSRIVGT- 234
++ Y R L NIL++ ++ K+SDFG++R+ + A T+R
Sbjct: 154 RGIASGMKYLSDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIP 213
Query: 235 YGYMSPEYAIQGIFSIKSDVFSFGVLLLEIVS-GKKTTGFYRTDSLTLLGYAWDLWTSNR 293
+ SPE F+ SDV+S+G++L E++S G++ W++ ++
Sbjct: 214 IRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPY--------------WEM-SNQD 258
Query: 294 TLELID-----PILEDEYSSKHMLLRYVNIALLCVQESADDRPTMNEVVSML 340
++ +D P D ++ + L+ L C Q+ ++RP ++VS+L
Sbjct: 259 VIKAVDEGYRLPPPMDCPAALYQLM------LDCWQKDRNNRPKFEQIVSIL 304
>pdb|2QOC|A Chain A, Human Epha3 Kinase Domain, Phosphorylated, Amp-Pnp Bound
Structure
Length = 344
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 79/292 (27%), Positives = 135/292 (46%), Gaps = 51/292 (17%)
Query: 78 LFSFSSVSTATNKFSDANKLGEGGFGPVYKGVLK----KGDEIAVKRLP-GRSGQGLREM 132
+ F+ ATN S +G G FG V G LK K +A+K L G + + R+
Sbjct: 6 VHEFAKELDATN-ISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDF 64
Query: 133 KNEASVIAKVQHKNLVRLLGCCIDKDEKILIYEYMPNKSLDFFLFDPTKR--------ML 184
EAS++ + H N++RL G +++ EYM N SLD FL + ML
Sbjct: 65 LGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGML 124
Query: 185 LDWSA--------NYSSR-LKVSNILLDKDINPKISDFGMARICGGNELQANTSRIVGT- 234
++ Y R L NIL++ ++ K+SDFG++R+ + A T+R
Sbjct: 125 RGIASGMKYLSDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIP 184
Query: 235 YGYMSPEYAIQGIFSIKSDVFSFGVLLLEIVS-GKKTTGFYRTDSLTLLGYAWDLWTSNR 293
+ SPE F+ SDV+S+G++L E++S G++ W++ ++
Sbjct: 185 IRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPY--------------WEM-SNQD 229
Query: 294 TLELID-----PILEDEYSSKHMLLRYVNIALLCVQESADDRPTMNEVVSML 340
++ +D P D ++ + L+ L C Q+ ++RP ++VS+L
Sbjct: 230 VIKAVDEGYRLPPPMDCPAALYQLM------LDCWQKDRNNRPKFEQIVSIL 275
>pdb|3P08|A Chain A, Crystal Structure Of The Human Btk Kinase Domain
pdb|3P08|B Chain B, Crystal Structure Of The Human Btk Kinase Domain
Length = 267
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 78/266 (29%), Positives = 115/266 (43%), Gaps = 38/266 (14%)
Query: 96 KLGEGGFGPVYKGVLKKGDEIAVKRLPGRSGQGLREMKNEASVIAKVQHKNLVRLLGCCI 155
+LG G FG V G + ++A+K + S E EA V+ + H+ LV+L G C
Sbjct: 15 ELGTGQFGVVKYGKWRGQYDVAIKMIKEGS-MSEDEFIEEAKVMMNLSHEKLVQLYGVCT 73
Query: 156 DKDEKILIYEYMPNKSLDFFLFDPTKRM----LLDW------------SANYSSR-LKVS 198
+ +I EYM N L +L + R LL+ S + R L
Sbjct: 74 KQRPIFIITEYMANGCLLNYLREMRHRFQTQQLLEMCKDVCEAMEYLESKQFLHRDLAAR 133
Query: 199 NILLDKDINPKISDFGMARICGGNELQANTSRIVGTY--GYMSPEYAIQGIFSIKSDVFS 256
N L++ K+SDFG++R +E TS + + + PE + FS KSD+++
Sbjct: 134 NCLVNDQGVVKVSDFGLSRYVLDDEY---TSSVGSKFPVRWSPPEVLMYSKFSSKSDIWA 190
Query: 257 FGVLLLEIVSGKKTTGFYRTDSLTLLGYAWDLWTSNRTLELIDPILEDEYSSKHMLLRYV 316
FGVL+ EI S K T+S T A + L L P L E +
Sbjct: 191 FGVLMWEIYSLGKMPYERFTNSETAEHIA-------QGLRLYRPHLASE--------KVY 235
Query: 317 NIALLCVQESADDRPTMNEVVSMLTD 342
I C E AD+RPT ++S + D
Sbjct: 236 TIMYSCWHEKADERPTFKILLSNILD 261
>pdb|2QOI|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f:y602f
Double Mutant
Length = 373
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 79/292 (27%), Positives = 135/292 (46%), Gaps = 51/292 (17%)
Query: 78 LFSFSSVSTATNKFSDANKLGEGGFGPVYKGVLK----KGDEIAVKRLP-GRSGQGLREM 132
+ F+ ATN S +G G FG V G LK K +A+K L G + + R+
Sbjct: 35 VHEFAKELDATN-ISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDF 93
Query: 133 KNEASVIAKVQHKNLVRLLGCCIDKDEKILIYEYMPNKSLDFFLFDPTKR--------ML 184
EAS++ + H N++RL G +++ EYM N SLD FL + ML
Sbjct: 94 LGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGML 153
Query: 185 LDWSA--------NYSSR-LKVSNILLDKDINPKISDFGMARICGGNELQANTSRIVGT- 234
++ Y R L NIL++ ++ K+SDFG++R+ + A T+R
Sbjct: 154 RGIASGMKYLSDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIP 213
Query: 235 YGYMSPEYAIQGIFSIKSDVFSFGVLLLEIVS-GKKTTGFYRTDSLTLLGYAWDLWTSNR 293
+ SPE F+ SDV+S+G++L E++S G++ W++ ++
Sbjct: 214 IRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERP--------------YWEM-SNQD 258
Query: 294 TLELID-----PILEDEYSSKHMLLRYVNIALLCVQESADDRPTMNEVVSML 340
++ +D P D ++ + L+ L C Q+ ++RP ++VS+L
Sbjct: 259 VIKAVDEGYRLPPPMDCPAALYQLM------LDCWQKDRNNRPKFEQIVSIL 304
>pdb|3GEN|A Chain A, The 1.6 A Crystal Structure Of Human Bruton's Tyrosine
Kinase Bound To A Pyrrolopyrimidine-Containing Compound
Length = 283
Score = 73.2 bits (178), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 76/264 (28%), Positives = 113/264 (42%), Gaps = 34/264 (12%)
Query: 96 KLGEGGFGPVYKGVLKKGDEIAVKRLPGRSGQGLREMKNEASVIAKVQHKNLVRLLGCCI 155
+LG G FG V G + ++A+K + S E EA V+ + H+ LV+L G C
Sbjct: 31 ELGTGQFGVVKYGKWRGQYDVAIKMIKEGS-MSEDEFIEEAKVMMNLSHEKLVQLYGVCT 89
Query: 156 DKDEKILIYEYMPNKSLDFFLFDPTKRM----LLDW------------SANYSSR-LKVS 198
+ +I EYM N L +L + R LL+ S + R L
Sbjct: 90 KQRPIFIITEYMANGCLLNYLREMRHRFQTQQLLEMCKDVCEAMEYLESKQFLHRDLAAR 149
Query: 199 NILLDKDINPKISDFGMARICGGNELQANTSRIVGTYGYMSPEYAIQGIFSIKSDVFSFG 258
N L++ K+SDFG++R +E ++ + PE + FS KSD+++FG
Sbjct: 150 NCLVNDQGVVKVSDFGLSRYVLDDEYTSSVGSKFPV-RWSPPEVLMYSKFSSKSDIWAFG 208
Query: 259 VLLLEIVSGKKTTGFYRTDSLTLLGYAWDLWTSNRTLELIDPILEDEYSSKHMLLRYVNI 318
VL+ EI S K T+S T A + L L P L E + I
Sbjct: 209 VLMWEIYSLGKMPYERFTNSETAEHIA-------QGLRLYRPHLASE--------KVYTI 253
Query: 319 ALLCVQESADDRPTMNEVVSMLTD 342
C E AD+RPT ++S + D
Sbjct: 254 MYSCWHEKADERPTFKILLSNILD 277
>pdb|2Y6M|A Chain A, Crystal Structure Of Epha4 Kinase Domain
pdb|2Y6O|A Chain A, Crystal Structure Of Epha4 Kinase Domain In Complex With
Dasatinib
Length = 291
Score = 73.2 bits (178), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 77/275 (28%), Positives = 125/275 (45%), Gaps = 54/275 (19%)
Query: 97 LGEGGFGPVYKGVLKKGDE----IAVKRL-PGRSGQGLREMKNEASVIAKVQHKNLVRLL 151
+G G FG V G LK + +A+K L G + + R+ +EAS++ + H N++ L
Sbjct: 22 IGVGEFGEVCSGRLKVPGKREICVAIKTLKAGYTDKQRRDFLSEASIMGQFDHPNIIHLE 81
Query: 152 GCCIDKDEKILIYEYMPNKSLDFFLFDPTKRM------------------LLDWSANYSS 193
G ++I EYM N SLD FL R L D S Y
Sbjct: 82 GVVTKCKPVMIITEYMENGSLDAFLRKNDGRFTVIQLVGMLRGIGSGMKYLSDMS--YVH 139
Query: 194 R-LKVSNILLDKDINPKISDFGMARICGGNELQANTSRIVGT-YGYMSPEYAIQGIFSIK 251
R L NIL++ ++ K+SDFGM+R+ + A T+R + +PE F+
Sbjct: 140 RDLAARNILVNSNLVCKVSDFGMSRVLEDDPEAAYTTRGGKIPIRWTAPEAIAYRKFTSA 199
Query: 252 SDVFSFGVLLLEIVS-GKKTTGFYRTDSLTLLGYAWDLWTSNRTLELID-----PILEDE 305
SDV+S+G+++ E++S G++ WD+ ++ ++ I+ P D
Sbjct: 200 SDVWSYGIVMWEVMSYGERPY--------------WDM-SNQDVIKAIEEGYRLPPPMDC 244
Query: 306 YSSKHMLLRYVNIALLCVQESADDRPTMNEVVSML 340
+ H L+ L C Q+ DRP ++V+ML
Sbjct: 245 PIALHQLM------LDCWQKERSDRPKFGQIVNML 273
>pdb|4ASZ|A Chain A, Crystal Structure Of Apo Trkb Kinase Domain
pdb|4AT3|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Cpd5n
pdb|4AT4|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Ex429
pdb|4AT5|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Gw2580
Length = 299
Score = 73.2 bits (178), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 58/213 (27%), Positives = 98/213 (46%), Gaps = 35/213 (16%)
Query: 96 KLGEGGFGPVYKG----VLKKGDEI--AVKRLPGRSGQGLREMKNEASVIAKVQHKNLVR 149
+LGEG FG V+ + + D+I AVK L S ++ EA ++ +QH+++V+
Sbjct: 20 ELGEGAFGKVFLAECYNLCPEQDKILVAVKTLKDASDNARKDFHREAELLTNLQHEHIVK 79
Query: 150 LLGCCIDKDEKILIYEYMPNKSLDFFLF-------------DPTKR-------------- 182
G C++ D I+++EYM + L+ FL PT+
Sbjct: 80 FYGVCVEGDPLIMVFEYMKHGDLNKFLRAHGPDAVLMAEGNPPTELTQSQMLHIAQQIAA 139
Query: 183 -MLLDWSANYSSR-LKVSNILLDKDINPKISDFGMARICGGNELQANTSRIVGTYGYMSP 240
M+ S ++ R L N L+ +++ KI DFGM+R + + +M P
Sbjct: 140 GMVYLASQHFVHRDLATRNCLVGENLLVKIGDFGMSRDVYSTDYYRVGGHTMLPIRWMPP 199
Query: 241 EYAIQGIFSIKSDVFSFGVLLLEIVSGKKTTGF 273
E + F+ +SDV+S GV+L EI + K +
Sbjct: 200 ESIMYRKFTTESDVWSLGVVLWEIFTYGKQPWY 232
>pdb|3PIX|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-Isopropyl-7-
(4-Methyl-Piperazin-1-Yl)-4-(5-Methyl-2h-Pyrazol-3-
Ylamino)-2h- Phthalazin-1-One
pdb|3PIY|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With R406
pdb|3PIZ|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
(5-Amino-1-O-
Tolyl-1h-Pyrazol-4-Yl)-[3-(1-Methanesulfonyl-Piperidin-
4-Yl)-Phenyl]- Methanone
pdb|3PJ1|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
3-(2,6-Dichloro-
Phenyl)-7-[4-(2-Diethylamino-Ethoxy)-Phenylamino]-1-
Methyl-3,4- Dihydro-1h-Pyrimido[4,5-D]pyrimidin-2-One
pdb|3PJ2|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-[4-(2-
Diethylamino-Ethoxy)-Phenylamino]-6-(4-Fluoro-Phenoxy)-
8-Methyl-8h- Pyrido[2,3-D]pyrimidin-7-One
pdb|3PJ3|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-Methyl-5-[(E)-
(3-Phenyl-Acryloyl)amino]-N-(2-Phenyl-3h-Imidazo[4,
5-B]pyridin-6-Yl)- Benzamide
Length = 274
Score = 73.2 bits (178), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 76/264 (28%), Positives = 113/264 (42%), Gaps = 34/264 (12%)
Query: 96 KLGEGGFGPVYKGVLKKGDEIAVKRLPGRSGQGLREMKNEASVIAKVQHKNLVRLLGCCI 155
+LG G FG V G + ++A+K + S E EA V+ + H+ LV+L G C
Sbjct: 22 ELGTGQFGVVKYGKWRGQYDVAIKMIKEGS-MSEDEFIEEAKVMMNLSHEKLVQLYGVCT 80
Query: 156 DKDEKILIYEYMPNKSLDFFLFDPTKRM----LLDW------------SANYSSR-LKVS 198
+ +I EYM N L +L + R LL+ S + R L
Sbjct: 81 KQRPIFIITEYMANGCLLNYLREMRHRFQTQQLLEMCKDVCEAMEYLESKQFLHRDLAAR 140
Query: 199 NILLDKDINPKISDFGMARICGGNELQANTSRIVGTYGYMSPEYAIQGIFSIKSDVFSFG 258
N L++ K+SDFG++R +E ++ + PE + FS KSD+++FG
Sbjct: 141 NCLVNDQGVVKVSDFGLSRYVLDDEYTSSVGSKFPV-RWSPPEVLMYSKFSSKSDIWAFG 199
Query: 259 VLLLEIVSGKKTTGFYRTDSLTLLGYAWDLWTSNRTLELIDPILEDEYSSKHMLLRYVNI 318
VL+ EI S K T+S T A + L L P L E + I
Sbjct: 200 VLMWEIYSLGKMPYERFTNSETAEHIA-------QGLRLYRPHLASE--------KVYTI 244
Query: 319 ALLCVQESADDRPTMNEVVSMLTD 342
C E AD+RPT ++S + D
Sbjct: 245 MYSCWHEKADERPTFKILLSNILD 268
>pdb|1K2P|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase Domain
pdb|1K2P|B Chain B, Crystal Structure Of Bruton's Tyrosine Kinase Domain
Length = 263
Score = 73.2 bits (178), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 76/264 (28%), Positives = 113/264 (42%), Gaps = 34/264 (12%)
Query: 96 KLGEGGFGPVYKGVLKKGDEIAVKRLPGRSGQGLREMKNEASVIAKVQHKNLVRLLGCCI 155
+LG G FG V G + ++A+K + S E EA V+ + H+ LV+L G C
Sbjct: 11 ELGTGQFGVVKYGKWRGQYDVAIKMIKEGS-MSEDEFIEEAKVMMNLSHEKLVQLYGVCT 69
Query: 156 DKDEKILIYEYMPNKSLDFFLFDPTKRM----LLDW------------SANYSSR-LKVS 198
+ +I EYM N L +L + R LL+ S + R L
Sbjct: 70 KQRPIFIITEYMANGCLLNYLREMRHRFQTQQLLEMCKDVCEAMEYLESKQFLHRDLAAR 129
Query: 199 NILLDKDINPKISDFGMARICGGNELQANTSRIVGTYGYMSPEYAIQGIFSIKSDVFSFG 258
N L++ K+SDFG++R +E ++ + PE + FS KSD+++FG
Sbjct: 130 NCLVNDQGVVKVSDFGLSRYVLDDEYTSSVGSKFPV-RWSPPEVLMYSKFSSKSDIWAFG 188
Query: 259 VLLLEIVSGKKTTGFYRTDSLTLLGYAWDLWTSNRTLELIDPILEDEYSSKHMLLRYVNI 318
VL+ EI S K T+S T A + L L P L E + I
Sbjct: 189 VLMWEIYSLGKMPYERFTNSETAEHIA-------QGLRLYRPHLASE--------KVYTI 233
Query: 319 ALLCVQESADDRPTMNEVVSMLTD 342
C E AD+RPT ++S + D
Sbjct: 234 MYSCWHEKADERPTFKILLSNILD 257
>pdb|3OCS|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase In Complex
With Inhibitor Cgi1746
Length = 271
Score = 73.2 bits (178), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 76/264 (28%), Positives = 113/264 (42%), Gaps = 34/264 (12%)
Query: 96 KLGEGGFGPVYKGVLKKGDEIAVKRLPGRSGQGLREMKNEASVIAKVQHKNLVRLLGCCI 155
+LG G FG V G + ++A+K + S E EA V+ + H+ LV+L G C
Sbjct: 16 ELGTGQFGVVKYGKWRGQYDVAIKMIKEGS-MSEDEFIEEAKVMMNLSHEKLVQLYGVCT 74
Query: 156 DKDEKILIYEYMPNKSLDFFLFDPTKRM----LLDW------------SANYSSR-LKVS 198
+ +I EYM N L +L + R LL+ S + R L
Sbjct: 75 KQRPIFIITEYMANGCLLNYLREMRHRFQTQQLLEMCKDVCEAMEYLESKQFLHRDLAAR 134
Query: 199 NILLDKDINPKISDFGMARICGGNELQANTSRIVGTYGYMSPEYAIQGIFSIKSDVFSFG 258
N L++ K+SDFG++R +E ++ + PE + FS KSD+++FG
Sbjct: 135 NCLVNDQGVVKVSDFGLSRYVLDDEYTSSVGSKFPV-RWSPPEVLMYSKFSSKSDIWAFG 193
Query: 259 VLLLEIVSGKKTTGFYRTDSLTLLGYAWDLWTSNRTLELIDPILEDEYSSKHMLLRYVNI 318
VL+ EI S K T+S T A + L L P L E + I
Sbjct: 194 VLMWEIYSLGKMPYERFTNSETAEHIA-------QGLRLYRPHLASE--------KVYTI 238
Query: 319 ALLCVQESADDRPTMNEVVSMLTD 342
C E AD+RPT ++S + D
Sbjct: 239 MYSCWHEKADERPTFKILLSNILD 262
>pdb|2XYU|A Chain A, Crystal Structure Of Epha4 Kinase Domain In Complex With
Vuf 12058
Length = 285
Score = 72.8 bits (177), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 77/275 (28%), Positives = 125/275 (45%), Gaps = 54/275 (19%)
Query: 97 LGEGGFGPVYKGVLKKGDE----IAVKRL-PGRSGQGLREMKNEASVIAKVQHKNLVRLL 151
+G G FG V G LK + +A+K L G + + R+ +EAS++ + H N++ L
Sbjct: 16 IGVGEFGEVCSGRLKVPGKREICVAIKTLKAGYTDKQRRDFLSEASIMGQFDHPNIIHLE 75
Query: 152 GCCIDKDEKILIYEYMPNKSLDFFLFDPTKRM------------------LLDWSANYSS 193
G ++I EYM N SLD FL R L D S Y
Sbjct: 76 GVVTKCKPVMIITEYMENGSLDAFLRKNDGRFTVIQLVGMLRGIGSGMKYLSDMS--YVH 133
Query: 194 R-LKVSNILLDKDINPKISDFGMARICGGNELQANTSRIVGT-YGYMSPEYAIQGIFSIK 251
R L NIL++ ++ K+SDFGM+R+ + A T+R + +PE F+
Sbjct: 134 RDLAARNILVNSNLVCKVSDFGMSRVLEDDPEAAYTTRGGKIPIRWTAPEAIAYRKFTSA 193
Query: 252 SDVFSFGVLLLEIVS-GKKTTGFYRTDSLTLLGYAWDLWTSNRTLELID-----PILEDE 305
SDV+S+G+++ E++S G++ WD+ ++ ++ I+ P D
Sbjct: 194 SDVWSYGIVMWEVMSYGERPY--------------WDM-SNQDVIKAIEEGYRLPPPMDC 238
Query: 306 YSSKHMLLRYVNIALLCVQESADDRPTMNEVVSML 340
+ H L+ L C Q+ DRP ++V+ML
Sbjct: 239 PIALHQLM------LDCWQKERSDRPKFGQIVNML 267
>pdb|2QOL|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596:y602:s768g Triple Mutant
Length = 373
Score = 72.8 bits (177), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 79/292 (27%), Positives = 134/292 (45%), Gaps = 51/292 (17%)
Query: 78 LFSFSSVSTATNKFSDANKLGEGGFGPVYKGVLK----KGDEIAVKRLP-GRSGQGLREM 132
+ F+ ATN S +G G FG V G LK K +A+K L G + + R+
Sbjct: 35 VHEFAKELDATN-ISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDF 93
Query: 133 KNEASVIAKVQHKNLVRLLGCCIDKDEKILIYEYMPNKSLDFFLFDPTKR--------ML 184
EAS++ + H N++RL G +++ EYM N SLD FL + ML
Sbjct: 94 LGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGML 153
Query: 185 LDWSA--------NYSSR-LKVSNILLDKDINPKISDFGMARICGGNELQANTSRIVGT- 234
++ Y R L NIL++ ++ K+SDFG+ R+ + A T+R
Sbjct: 154 RGIASGMKYLSDMGYVHRDLAARNILINSNLVCKVSDFGLGRVLEDDPEAAYTTRGGKIP 213
Query: 235 YGYMSPEYAIQGIFSIKSDVFSFGVLLLEIVS-GKKTTGFYRTDSLTLLGYAWDLWTSNR 293
+ SPE F+ SDV+S+G++L E++S G++ W++ ++
Sbjct: 214 IRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERP--------------YWEM-SNQD 258
Query: 294 TLELID-----PILEDEYSSKHMLLRYVNIALLCVQESADDRPTMNEVVSML 340
++ +D P D ++ + L+ L C Q+ ++RP ++VS+L
Sbjct: 259 VIKAVDEGYRLPPPMDCPAALYQLM------LDCWQKDRNNRPKFEQIVSIL 304
>pdb|3OCT|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase Mutant V555r
In Complex With Dasatinib
Length = 265
Score = 72.8 bits (177), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 76/264 (28%), Positives = 113/264 (42%), Gaps = 34/264 (12%)
Query: 96 KLGEGGFGPVYKGVLKKGDEIAVKRLPGRSGQGLREMKNEASVIAKVQHKNLVRLLGCCI 155
+LG G FG V G + ++A+K + S E EA V+ + H+ LV+L G C
Sbjct: 16 ELGTGQFGVVKYGKWRGQYDVAIKMIKEGS-MSEDEFIEEAKVMMNLSHEKLVQLYGVCT 74
Query: 156 DKDEKILIYEYMPNKSLDFFLFDPTKRM----LLDW------------SANYSSR-LKVS 198
+ +I EYM N L +L + R LL+ S + R L
Sbjct: 75 KQRPIFIITEYMANGCLLNYLREMRHRFQTQQLLEMCKDVCEAMEYLESKQFLHRDLAAR 134
Query: 199 NILLDKDINPKISDFGMARICGGNELQANTSRIVGTYGYMSPEYAIQGIFSIKSDVFSFG 258
N L++ K+SDFG++R +E ++ + PE + FS KSD+++FG
Sbjct: 135 NCLVNDQGVVKVSDFGLSRYVLDDEYTSSRGSKFPV-RWSPPEVLMYSKFSSKSDIWAFG 193
Query: 259 VLLLEIVSGKKTTGFYRTDSLTLLGYAWDLWTSNRTLELIDPILEDEYSSKHMLLRYVNI 318
VL+ EI S K T+S T A + L L P L E + I
Sbjct: 194 VLMWEIYSLGKMPYERFTNSETAEHIA-------QGLRLYRPHLASE--------KVYTI 238
Query: 319 ALLCVQESADDRPTMNEVVSMLTD 342
C E AD+RPT ++S + D
Sbjct: 239 MYSCWHEKADERPTFKILLSNILD 262
>pdb|3BEL|A Chain A, X-Ray Structure Of Egfr In Complex With Oxime Inhibitor
pdb|2RGP|A Chain A, Structure Of Egfr In Complex With Hydrazone, A Potent Dual
Inhibitor
Length = 315
Score = 72.8 bits (177), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 57/201 (28%), Positives = 102/201 (50%), Gaps = 24/201 (11%)
Query: 89 NKFSDANKLGEGGFGPVYKGV-LKKGDEI----AVKRL-PGRSGQGLREMKNEASVIAKV 142
+F LG G FG VYKG+ + +G+++ A+K L S + +E+ +EA V+A V
Sbjct: 9 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASV 68
Query: 143 QHKNLVRLLGCCIDKDEKILIYEYMPNKSLDFFLFDPT----KRMLLDWSA------NY- 191
+ ++ RLLG C+ + LI + MP L ++ + + LL+W NY
Sbjct: 69 DNPHVCRLLGICLTSTVQ-LITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYL 127
Query: 192 ------SSRLKVSNILLDKDINPKISDFGMARICGGNELQANTSRIVGTYGYMSPEYAIQ 245
L N+L+ + KI+DFG+A++ G E + + +M+ E +
Sbjct: 128 EDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILH 187
Query: 246 GIFSIKSDVFSFGVLLLEIVS 266
I++ +SDV+S+GV + E+++
Sbjct: 188 RIYTHQSDVWSYGVTVWELMT 208
>pdb|2JIU|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Complex With Aee788
pdb|2JIU|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Complex With Aee788
Length = 328
Score = 72.8 bits (177), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 57/201 (28%), Positives = 102/201 (50%), Gaps = 24/201 (11%)
Query: 89 NKFSDANKLGEGGFGPVYKGV-LKKGDEI----AVKRL-PGRSGQGLREMKNEASVIAKV 142
+F LG G FG VYKG+ + +G+++ A+K L S + +E+ +EA V+A V
Sbjct: 16 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASV 75
Query: 143 QHKNLVRLLGCCIDKDEKILIYEYMPNKSLDFFLFDPT----KRMLLDWSA------NY- 191
+ ++ RLLG C+ + LI + MP L ++ + + LL+W NY
Sbjct: 76 DNPHVCRLLGICLTSTVQ-LIMQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYL 134
Query: 192 ------SSRLKVSNILLDKDINPKISDFGMARICGGNELQANTSRIVGTYGYMSPEYAIQ 245
L N+L+ + KI+DFG+A++ G E + + +M+ E +
Sbjct: 135 EDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILH 194
Query: 246 GIFSIKSDVFSFGVLLLEIVS 266
I++ +SDV+S+GV + E+++
Sbjct: 195 RIYTHQSDVWSYGVTVWELMT 215
>pdb|2JIT|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation
pdb|2JIT|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation
Length = 327
Score = 72.8 bits (177), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 57/201 (28%), Positives = 102/201 (50%), Gaps = 24/201 (11%)
Query: 89 NKFSDANKLGEGGFGPVYKGV-LKKGDEI----AVKRL-PGRSGQGLREMKNEASVIAKV 142
+F LG G FG VYKG+ + +G+++ A+K L S + +E+ +EA V+A V
Sbjct: 15 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASV 74
Query: 143 QHKNLVRLLGCCIDKDEKILIYEYMPNKSLDFFLFDPT----KRMLLDWSA------NY- 191
+ ++ RLLG C+ + LI + MP L ++ + + LL+W NY
Sbjct: 75 DNPHVCRLLGICLTSTVQ-LIMQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYL 133
Query: 192 ------SSRLKVSNILLDKDINPKISDFGMARICGGNELQANTSRIVGTYGYMSPEYAIQ 245
L N+L+ + KI+DFG+A++ G E + + +M+ E +
Sbjct: 134 EDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILH 193
Query: 246 GIFSIKSDVFSFGVLLLEIVS 266
I++ +SDV+S+GV + E+++
Sbjct: 194 RIYTHQSDVWSYGVTVWELMT 214
>pdb|2RFD|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFD|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|C Chain C, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|D Chain D, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
Length = 324
Score = 72.4 bits (176), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 57/201 (28%), Positives = 102/201 (50%), Gaps = 24/201 (11%)
Query: 89 NKFSDANKLGEGGFGPVYKGV-LKKGDEI----AVKRL-PGRSGQGLREMKNEASVIAKV 142
+F LG G FG VYKG+ + +G+++ A+K L S + +E+ +EA V+A V
Sbjct: 12 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASV 71
Query: 143 QHKNLVRLLGCCIDKDEKILIYEYMPNKSLDFFLFDPT----KRMLLDWSA------NY- 191
+ ++ RLLG C+ + LI + MP L ++ + + LL+W NY
Sbjct: 72 DNPHVCRLLGICLTSTVQ-LITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAEGMNYL 130
Query: 192 ------SSRLKVSNILLDKDINPKISDFGMARICGGNELQANTSRIVGTYGYMSPEYAIQ 245
L N+L+ + KI+DFG+A++ G E + + +M+ E +
Sbjct: 131 EDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILH 190
Query: 246 GIFSIKSDVFSFGVLLLEIVS 266
I++ +SDV+S+GV + E+++
Sbjct: 191 RIYTHQSDVWSYGVTVWELMT 211
>pdb|3IKA|A Chain A, Crystal Structure Of Egfr 696-1022 T790m Mutant Covalently
Binding To Wz4002
pdb|3IKA|B Chain B, Crystal Structure Of Egfr 696-1022 T790m Mutant Covalently
Binding To Wz4002
Length = 331
Score = 72.4 bits (176), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 57/201 (28%), Positives = 102/201 (50%), Gaps = 24/201 (11%)
Query: 89 NKFSDANKLGEGGFGPVYKGV-LKKGDEI----AVKRL-PGRSGQGLREMKNEASVIAKV 142
+F LG G FG VYKG+ + +G+++ A+K L S + +E+ +EA V+A V
Sbjct: 19 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASV 78
Query: 143 QHKNLVRLLGCCIDKDEKILIYEYMPNKSLDFFLFDPT----KRMLLDWSA------NY- 191
+ ++ RLLG C+ + LI + MP L ++ + + LL+W NY
Sbjct: 79 DNPHVCRLLGICLTSTVQ-LIMQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYL 137
Query: 192 ------SSRLKVSNILLDKDINPKISDFGMARICGGNELQANTSRIVGTYGYMSPEYAIQ 245
L N+L+ + KI+DFG+A++ G E + + +M+ E +
Sbjct: 138 EDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILH 197
Query: 246 GIFSIKSDVFSFGVLLLEIVS 266
I++ +SDV+S+GV + E+++
Sbjct: 198 RIYTHQSDVWSYGVTVWELMT 218
>pdb|2JIV|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Compex With Hki-272
pdb|2JIV|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Compex With Hki-272
Length = 328
Score = 72.4 bits (176), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 57/201 (28%), Positives = 102/201 (50%), Gaps = 24/201 (11%)
Query: 89 NKFSDANKLGEGGFGPVYKGV-LKKGDEI----AVKRL-PGRSGQGLREMKNEASVIAKV 142
+F LG G FG VYKG+ + +G+++ A+K L S + +E+ +EA V+A V
Sbjct: 16 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASV 75
Query: 143 QHKNLVRLLGCCIDKDEKILIYEYMPNKSLDFFLFDPT----KRMLLDWSA------NY- 191
+ ++ RLLG C+ + LI + MP L ++ + + LL+W NY
Sbjct: 76 DNPHVCRLLGICLTSTVQ-LIMQLMPFGXLLDYVREHKDNIGSQYLLNWCVQIAKGMNYL 134
Query: 192 ------SSRLKVSNILLDKDINPKISDFGMARICGGNELQANTSRIVGTYGYMSPEYAIQ 245
L N+L+ + KI+DFG+A++ G E + + +M+ E +
Sbjct: 135 EDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILH 194
Query: 246 GIFSIKSDVFSFGVLLLEIVS 266
I++ +SDV+S+GV + E+++
Sbjct: 195 RIYTHQSDVWSYGVTVWELMT 215
>pdb|1M14|A Chain A, Tyrosine Kinase Domain From Epidermal Growth Factor
Receptor
pdb|1M17|A Chain A, Epidermal Growth Factor Receptor Tyrosine Kinase Domain
With 4-Anilinoquinazoline Inhibitor Erlotinib
Length = 333
Score = 72.4 bits (176), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 57/201 (28%), Positives = 102/201 (50%), Gaps = 24/201 (11%)
Query: 89 NKFSDANKLGEGGFGPVYKGV-LKKGDEI----AVKRL-PGRSGQGLREMKNEASVIAKV 142
+F LG G FG VYKG+ + +G+++ A+K L S + +E+ +EA V+A V
Sbjct: 21 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASV 80
Query: 143 QHKNLVRLLGCCIDKDEKILIYEYMPNKSLDFFLFDPT----KRMLLDWSA------NY- 191
+ ++ RLLG C+ + LI + MP L ++ + + LL+W NY
Sbjct: 81 DNPHVCRLLGICLTSTVQ-LITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYL 139
Query: 192 ------SSRLKVSNILLDKDINPKISDFGMARICGGNELQANTSRIVGTYGYMSPEYAIQ 245
L N+L+ + KI+DFG+A++ G E + + +M+ E +
Sbjct: 140 EDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILH 199
Query: 246 GIFSIKSDVFSFGVLLLEIVS 266
I++ +SDV+S+GV + E+++
Sbjct: 200 RIYTHQSDVWSYGVTVWELMT 220
>pdb|4HJO|A Chain A, Crystal Structure Of The Inactive Egfr Tyrosine Kinase
Domain With Erlotinib
Length = 337
Score = 72.4 bits (176), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 57/201 (28%), Positives = 102/201 (50%), Gaps = 24/201 (11%)
Query: 89 NKFSDANKLGEGGFGPVYKGV-LKKGDEI----AVKRL-PGRSGQGLREMKNEASVIAKV 142
+F LG G FG VYKG+ + +G+++ A+K L S + +E+ +EA V+A V
Sbjct: 25 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASV 84
Query: 143 QHKNLVRLLGCCIDKDEKILIYEYMPNKSLDFFLFDPT----KRMLLDWSA------NY- 191
+ ++ RLLG C+ + LI + MP L ++ + + LL+W NY
Sbjct: 85 DNPHVCRLLGICLTSTVQ-LITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYL 143
Query: 192 ------SSRLKVSNILLDKDINPKISDFGMARICGGNELQANTSRIVGTYGYMSPEYAIQ 245
L N+L+ + KI+DFG+A++ G E + + +M+ E +
Sbjct: 144 EDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILH 203
Query: 246 GIFSIKSDVFSFGVLLLEIVS 266
I++ +SDV+S+GV + E+++
Sbjct: 204 RIYTHQSDVWSYGVTVWELMT 224
>pdb|4I24|A Chain A, Structure Of T790m Egfr Kinase Domain Co-crystallized With
Dacomitinib
pdb|4I24|B Chain B, Structure Of T790m Egfr Kinase Domain Co-crystallized With
Dacomitinib
Length = 329
Score = 72.4 bits (176), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 57/201 (28%), Positives = 102/201 (50%), Gaps = 24/201 (11%)
Query: 89 NKFSDANKLGEGGFGPVYKGV-LKKGDEI----AVKRL-PGRSGQGLREMKNEASVIAKV 142
+F LG G FG VYKG+ + +G+++ A+K L S + +E+ +EA V+A V
Sbjct: 17 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASV 76
Query: 143 QHKNLVRLLGCCIDKDEKILIYEYMPNKSLDFFLFDPT----KRMLLDWSA------NY- 191
+ ++ RLLG C+ + LI + MP L ++ + + LL+W NY
Sbjct: 77 DNPHVCRLLGICLTSTVQ-LIMQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYL 135
Query: 192 ------SSRLKVSNILLDKDINPKISDFGMARICGGNELQANTSRIVGTYGYMSPEYAIQ 245
L N+L+ + KI+DFG+A++ G E + + +M+ E +
Sbjct: 136 EDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILH 195
Query: 246 GIFSIKSDVFSFGVLLLEIVS 266
I++ +SDV+S+GV + E+++
Sbjct: 196 RIYTHQSDVWSYGVTVWELMT 216
>pdb|4G5P|A Chain A, Crystal Structure Of Egfr Kinase T790m In Complex With
Bibw2992
pdb|4G5P|B Chain B, Crystal Structure Of Egfr Kinase T790m In Complex With
Bibw2992
Length = 330
Score = 72.4 bits (176), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 57/201 (28%), Positives = 102/201 (50%), Gaps = 24/201 (11%)
Query: 89 NKFSDANKLGEGGFGPVYKGV-LKKGDEI----AVKRL-PGRSGQGLREMKNEASVIAKV 142
+F LG G FG VYKG+ + +G+++ A+K L S + +E+ +EA V+A V
Sbjct: 18 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASV 77
Query: 143 QHKNLVRLLGCCIDKDEKILIYEYMPNKSLDFFLFDPT----KRMLLDWSA------NY- 191
+ ++ RLLG C+ + LI + MP L ++ + + LL+W NY
Sbjct: 78 DNPHVCRLLGICLTSTVQ-LIMQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYL 136
Query: 192 ------SSRLKVSNILLDKDINPKISDFGMARICGGNELQANTSRIVGTYGYMSPEYAIQ 245
L N+L+ + KI+DFG+A++ G E + + +M+ E +
Sbjct: 137 EDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILH 196
Query: 246 GIFSIKSDVFSFGVLLLEIVS 266
I++ +SDV+S+GV + E+++
Sbjct: 197 RIYTHQSDVWSYGVTVWELMT 217
>pdb|2J5F|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With An
Irreversible Inhibitor 34-Jab
pdb|2ITW|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Afn941
pdb|2ITX|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Amp- Pnp
pdb|2ITY|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Iressa
pdb|2J6M|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Aee788
pdb|3POZ|A Chain A, Egfr Kinase Domain Complexed With Tak-285
Length = 327
Score = 72.4 bits (176), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 57/201 (28%), Positives = 102/201 (50%), Gaps = 24/201 (11%)
Query: 89 NKFSDANKLGEGGFGPVYKGV-LKKGDEI----AVKRL-PGRSGQGLREMKNEASVIAKV 142
+F LG G FG VYKG+ + +G+++ A+K L S + +E+ +EA V+A V
Sbjct: 15 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASV 74
Query: 143 QHKNLVRLLGCCIDKDEKILIYEYMPNKSLDFFLFDPT----KRMLLDWSA------NY- 191
+ ++ RLLG C+ + LI + MP L ++ + + LL+W NY
Sbjct: 75 DNPHVCRLLGICLTSTVQ-LITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYL 133
Query: 192 ------SSRLKVSNILLDKDINPKISDFGMARICGGNELQANTSRIVGTYGYMSPEYAIQ 245
L N+L+ + KI+DFG+A++ G E + + +M+ E +
Sbjct: 134 EDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILH 193
Query: 246 GIFSIKSDVFSFGVLLLEIVS 266
I++ +SDV+S+GV + E+++
Sbjct: 194 RIYTHQSDVWSYGVTVWELMT 214
>pdb|3LZB|A Chain A, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|B Chain B, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|C Chain C, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|D Chain D, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|E Chain E, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|F Chain F, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|G Chain G, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|H Chain H, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
Length = 327
Score = 72.4 bits (176), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 57/201 (28%), Positives = 102/201 (50%), Gaps = 24/201 (11%)
Query: 89 NKFSDANKLGEGGFGPVYKGV-LKKGDEI----AVKRL-PGRSGQGLREMKNEASVIAKV 142
+F LG G FG VYKG+ + +G+++ A+K L S + +E+ +EA V+A V
Sbjct: 15 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASV 74
Query: 143 QHKNLVRLLGCCIDKDEKILIYEYMPNKSLDFFLFDPT----KRMLLDWSA------NY- 191
+ ++ RLLG C+ + LI + MP L ++ + + LL+W NY
Sbjct: 75 DNPHVCRLLGICLTSTVQ-LITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYL 133
Query: 192 ------SSRLKVSNILLDKDINPKISDFGMARICGGNELQANTSRIVGTYGYMSPEYAIQ 245
L N+L+ + KI+DFG+A++ G E + + +M+ E +
Sbjct: 134 EDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILH 193
Query: 246 GIFSIKSDVFSFGVLLLEIVS 266
I++ +SDV+S+GV + E+++
Sbjct: 194 RIYTHQSDVWSYGVTVWELMT 214
>pdb|2J5E|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With An
Irreversible Inhibitor 13-Jab
Length = 327
Score = 72.4 bits (176), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 57/201 (28%), Positives = 102/201 (50%), Gaps = 24/201 (11%)
Query: 89 NKFSDANKLGEGGFGPVYKGV-LKKGDEI----AVKRL-PGRSGQGLREMKNEASVIAKV 142
+F LG G FG VYKG+ + +G+++ A+K L S + +E+ +EA V+A V
Sbjct: 15 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASV 74
Query: 143 QHKNLVRLLGCCIDKDEKILIYEYMPNKSLDFFLFDPT----KRMLLDWSA------NY- 191
+ ++ RLLG C+ + LI + MP L ++ + + LL+W NY
Sbjct: 75 DNPHVCRLLGICLTSTVQ-LITQLMPFGXLLDYVREHKDNIGSQYLLNWCVQIAKGMNYL 133
Query: 192 ------SSRLKVSNILLDKDINPKISDFGMARICGGNELQANTSRIVGTYGYMSPEYAIQ 245
L N+L+ + KI+DFG+A++ G E + + +M+ E +
Sbjct: 134 EDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILH 193
Query: 246 GIFSIKSDVFSFGVLLLEIVS 266
I++ +SDV+S+GV + E+++
Sbjct: 194 RIYTHQSDVWSYGVTVWELMT 214
>pdb|1XKK|A Chain A, Egfr Kinase Domain Complexed With A Quinazoline Inhibitor-
Gw572016
Length = 352
Score = 72.4 bits (176), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 57/201 (28%), Positives = 102/201 (50%), Gaps = 24/201 (11%)
Query: 89 NKFSDANKLGEGGFGPVYKGV-LKKGDEI----AVKRL-PGRSGQGLREMKNEASVIAKV 142
+F LG G FG VYKG+ + +G+++ A+K L S + +E+ +EA V+A V
Sbjct: 40 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASV 99
Query: 143 QHKNLVRLLGCCIDKDEKILIYEYMPNKSLDFFLFDPT----KRMLLDWSA------NY- 191
+ ++ RLLG C+ + LI + MP L ++ + + LL+W NY
Sbjct: 100 DNPHVCRLLGICLTSTVQ-LITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYL 158
Query: 192 ------SSRLKVSNILLDKDINPKISDFGMARICGGNELQANTSRIVGTYGYMSPEYAIQ 245
L N+L+ + KI+DFG+A++ G E + + +M+ E +
Sbjct: 159 EDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILH 218
Query: 246 GIFSIKSDVFSFGVLLLEIVS 266
I++ +SDV+S+GV + E+++
Sbjct: 219 RIYTHQSDVWSYGVTVWELMT 239
>pdb|2GS7|A Chain A, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|2GS7|B Chain B, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|A Chain A, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|B Chain B, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|C Chain C, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|D Chain D, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
Length = 330
Score = 72.0 bits (175), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 57/201 (28%), Positives = 102/201 (50%), Gaps = 24/201 (11%)
Query: 89 NKFSDANKLGEGGFGPVYKGV-LKKGDEI----AVKRL-PGRSGQGLREMKNEASVIAKV 142
+F LG G FG VYKG+ + +G+++ A+K L S + +E+ +EA V+A V
Sbjct: 18 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASV 77
Query: 143 QHKNLVRLLGCCIDKDEKILIYEYMPNKSLDFFLFDPT----KRMLLDWSA------NY- 191
+ ++ RLLG C+ + LI + MP L ++ + + LL+W NY
Sbjct: 78 DNPHVCRLLGICLTSTVQ-LITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYL 136
Query: 192 ------SSRLKVSNILLDKDINPKISDFGMARICGGNELQANTSRIVGTYGYMSPEYAIQ 245
L N+L+ + KI+DFG+A++ G E + + +M+ E +
Sbjct: 137 EDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILH 196
Query: 246 GIFSIKSDVFSFGVLLLEIVS 266
I++ +SDV+S+GV + E+++
Sbjct: 197 RIYTHQSDVWSYGVTVWELMT 217
>pdb|3VJO|A Chain A, Crystal Structure Of The Wild-Type Egfr Kinase Domain In
Complex With Amppnp
Length = 334
Score = 72.0 bits (175), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 57/201 (28%), Positives = 102/201 (50%), Gaps = 24/201 (11%)
Query: 89 NKFSDANKLGEGGFGPVYKGV-LKKGDEI----AVKRL-PGRSGQGLREMKNEASVIAKV 142
+F LG G FG VYKG+ + +G+++ A+K L S + +E+ +EA V+A V
Sbjct: 22 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASV 81
Query: 143 QHKNLVRLLGCCIDKDEKILIYEYMPNKSLDFFLFDPT----KRMLLDWSA------NY- 191
+ ++ RLLG C+ + LI + MP L ++ + + LL+W NY
Sbjct: 82 DNPHVCRLLGICLTSTVQ-LITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYL 140
Query: 192 ------SSRLKVSNILLDKDINPKISDFGMARICGGNELQANTSRIVGTYGYMSPEYAIQ 245
L N+L+ + KI+DFG+A++ G E + + +M+ E +
Sbjct: 141 EDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILH 200
Query: 246 GIFSIKSDVFSFGVLLLEIVS 266
I++ +SDV+S+GV + E+++
Sbjct: 201 RIYTHQSDVWSYGVTVWELMT 221
>pdb|2GS2|A Chain A, Crystal Structure Of The Active Egfr Kinase Domain
pdb|2GS6|A Chain A, Crystal Structure Of The Active Egfr Kinase Domain In
Complex With An Atp Analog-Peptide Conjugate
pdb|2RF9|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RF9|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|3W2S|A Chain A, Egfr Kinase Domain With Compound4
Length = 330
Score = 72.0 bits (175), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 57/201 (28%), Positives = 102/201 (50%), Gaps = 24/201 (11%)
Query: 89 NKFSDANKLGEGGFGPVYKGV-LKKGDEI----AVKRL-PGRSGQGLREMKNEASVIAKV 142
+F LG G FG VYKG+ + +G+++ A+K L S + +E+ +EA V+A V
Sbjct: 18 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASV 77
Query: 143 QHKNLVRLLGCCIDKDEKILIYEYMPNKSLDFFLFDPT----KRMLLDWSA------NY- 191
+ ++ RLLG C+ + LI + MP L ++ + + LL+W NY
Sbjct: 78 DNPHVCRLLGICLTSTVQ-LITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYL 136
Query: 192 ------SSRLKVSNILLDKDINPKISDFGMARICGGNELQANTSRIVGTYGYMSPEYAIQ 245
L N+L+ + KI+DFG+A++ G E + + +M+ E +
Sbjct: 137 EDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILH 196
Query: 246 GIFSIKSDVFSFGVLLLEIVS 266
I++ +SDV+S+GV + E+++
Sbjct: 197 RIYTHQSDVWSYGVTVWELMT 217
>pdb|4I23|A Chain A, Crystal Structure Of The Wild-type Egfr Kinase Domain In
Complex With Dacomitinib (soaked)
Length = 329
Score = 72.0 bits (175), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 57/201 (28%), Positives = 102/201 (50%), Gaps = 24/201 (11%)
Query: 89 NKFSDANKLGEGGFGPVYKGV-LKKGDEI----AVKRL-PGRSGQGLREMKNEASVIAKV 142
+F LG G FG VYKG+ + +G+++ A+K L S + +E+ +EA V+A V
Sbjct: 17 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASV 76
Query: 143 QHKNLVRLLGCCIDKDEKILIYEYMPNKSLDFFLFDPT----KRMLLDWSA------NY- 191
+ ++ RLLG C+ + LI + MP L ++ + + LL+W NY
Sbjct: 77 DNPHVCRLLGICLTSTVQ-LITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYL 135
Query: 192 ------SSRLKVSNILLDKDINPKISDFGMARICGGNELQANTSRIVGTYGYMSPEYAIQ 245
L N+L+ + KI+DFG+A++ G E + + +M+ E +
Sbjct: 136 EDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILH 195
Query: 246 GIFSIKSDVFSFGVLLLEIVS 266
I++ +SDV+S+GV + E+++
Sbjct: 196 RIYTHQSDVWSYGVTVWELMT 216
>pdb|3NYX|A Chain A, Non-Phosphorylated Tyk2 Jh1 Domain With
Quinoline-Thiadiazole- Thiophene Inhibitor
Length = 302
Score = 72.0 bits (175), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 70/230 (30%), Positives = 102/230 (44%), Gaps = 30/230 (13%)
Query: 97 LGEGGFG--------PVYKGVLKKGDEIAVKRLPGRSGQGLRE-MKNEASVIAKVQHKNL 147
LGEG FG P G G+ +AVK L G R K E ++ + H+++
Sbjct: 22 LGEGHFGKVSLYCYDPTNDGT---GEMVAVKALKADCGPQHRSGWKQEIDILRTLYHEHI 78
Query: 148 VRLLGCCIDKDEK--ILIYEYMPNKSLD--------------FFLFDPTKRMLLDWSANY 191
++ GCC D+ EK L+ EY+P SL F + M S +Y
Sbjct: 79 IKYKGCCEDQGEKSLQLVMEYVPLGSLRDYLPRHSIGLAQLLLFAQQICEGMAYLHSQHY 138
Query: 192 SSR-LKVSNILLDKDINPKISDFGMAR-ICGGNELQANTSRIVGTYGYMSPEYAIQGIFS 249
R L N+LLD D KI DFG+A+ + G+E + +PE + F
Sbjct: 139 IHRNLAARNVLLDNDRLVKIGDFGLAKAVPEGHEYYRVREDGDSPVFWYAPECLKEYKFY 198
Query: 250 IKSDVFSFGVLLLEIVSGKKTTGFYRTDSLTLLGYAWDLWTSNRTLELID 299
SDV+SFGV L E+++ ++ T L L+G A T R EL++
Sbjct: 199 YASDVWSFGVTLYELLTHCDSSQSPPTKFLELIGIAQGQMTVLRLTELLE 248
>pdb|2QOO|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:y742f Triple Mutant
Length = 373
Score = 72.0 bits (175), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 77/292 (26%), Positives = 134/292 (45%), Gaps = 51/292 (17%)
Query: 78 LFSFSSVSTATNKFSDANKLGEGGFGPVYKGVLK----KGDEIAVKRLP-GRSGQGLREM 132
+ F+ ATN S +G G FG V G LK K +A+K L G + + R+
Sbjct: 35 VHEFAKELDATN-ISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDF 93
Query: 133 KNEASVIAKVQHKNLVRLLGCCIDKDEKILIYEYMPNKSLDFFLFDPTKRM----LLDWS 188
EAS++ + H N++RL G +++ EYM N SLD FL + L+
Sbjct: 94 LGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGML 153
Query: 189 ANYSSRLK-------------VSNILLDKDINPKISDFGMARICGGNELQANTSRIVGT- 234
+S +K NIL++ ++ K+SDFG++R+ + A T+R
Sbjct: 154 RGIASGMKYLSDMGFVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIP 213
Query: 235 YGYMSPEYAIQGIFSIKSDVFSFGVLLLEIVS-GKKTTGFYRTDSLTLLGYAWDLWTSNR 293
+ SPE F+ SDV+S+G++L E++S G++ W++ ++
Sbjct: 214 IRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERP--------------YWEM-SNQD 258
Query: 294 TLELID-----PILEDEYSSKHMLLRYVNIALLCVQESADDRPTMNEVVSML 340
++ +D P D ++ + L+ L C Q+ ++RP ++VS+L
Sbjct: 259 VIKAVDEGYRLPPPMDCPAALYQLM------LDCWQKDRNNRPKFEQIVSIL 304
>pdb|4G5J|A Chain A, Crystal Structure Of Egfr Kinase In Complex With Bibw2992
Length = 330
Score = 72.0 bits (175), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 57/201 (28%), Positives = 102/201 (50%), Gaps = 24/201 (11%)
Query: 89 NKFSDANKLGEGGFGPVYKGV-LKKGDEI----AVKRL-PGRSGQGLREMKNEASVIAKV 142
+F LG G FG VYKG+ + +G+++ A+K L S + +E+ +EA V+A V
Sbjct: 18 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASV 77
Query: 143 QHKNLVRLLGCCIDKDEKILIYEYMPNKSLDFFLFDPT----KRMLLDWSA------NY- 191
+ ++ RLLG C+ + LI + MP L ++ + + LL+W NY
Sbjct: 78 DNPHVCRLLGICLTSTVQ-LITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYL 136
Query: 192 ------SSRLKVSNILLDKDINPKISDFGMARICGGNELQANTSRIVGTYGYMSPEYAIQ 245
L N+L+ + KI+DFG+A++ G E + + +M+ E +
Sbjct: 137 EDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILH 196
Query: 246 GIFSIKSDVFSFGVLLLEIVS 266
I++ +SDV+S+GV + E+++
Sbjct: 197 RIYTHQSDVWSYGVTVWELMT 217
>pdb|4FOB|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 1
pdb|4FOC|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 2
Length = 353
Score = 72.0 bits (175), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 72/264 (27%), Positives = 112/264 (42%), Gaps = 49/264 (18%)
Query: 48 NLKANNVNIELPVNSKQTKRSKKKEVDQLPLFSFSSVSTATNKFSDANK--------LGE 99
L+A + ++ P R+ D P +SF+ +++ + + + LG
Sbjct: 8 ELQAMQMELQSPEYKLSKLRTSTIMTDYNPNYSFAGKTSSISDLKEVPRKNITLIRGLGH 67
Query: 100 GGFGPVYKGVLKKGD------EIAVKRLPGR-SGQGLREMKNEASVIAKVQHKNLVRLLG 152
G FG VY+G + ++AVK LP S Q + EA +I+K H+N+VR +G
Sbjct: 68 GAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVRCIG 127
Query: 153 CCIDKDEKILIYEYMPNKSLDFFLFDPTKRMLLDWSANYSSRLKVS------------NI 200
+ + ++ E M L FL + R S L V+ N
Sbjct: 128 VSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEENH 187
Query: 201 LLDKDIN--------------PKISDFGMARICGGNELQANTSRIVGT----YGYMSPEY 242
+ +DI KI DFGMAR + +A+ R G +M PE
Sbjct: 188 FIHRDIAARNCLLTCPGPGRVAKIGDFGMAR----DIYRASYYRKGGCAMLPVKWMPPEA 243
Query: 243 AIQGIFSIKSDVFSFGVLLLEIVS 266
++GIF+ K+D +SFGVLL EI S
Sbjct: 244 FMEGIFTSKTDTWSFGVLLWEIFS 267
>pdb|2VWU|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWV|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWW|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWX|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWY|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWZ|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VX0|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VX1|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2X9F|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2XVD|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|4BB4|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
Length = 302
Score = 72.0 bits (175), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 74/277 (26%), Positives = 125/277 (45%), Gaps = 56/277 (20%)
Query: 97 LGEGGFGPVYKGVLK----KGDEIAVKRLPG-RSGQGLREMKNEASVIAKVQHKNLVRLL 151
+G G FG V +G LK K +A+K L G + + RE +EAS++ + +H N++RL
Sbjct: 24 IGAGEFGEVCRGRLKAPGKKESCVAIKTLKGGYTERQRREFLSEASIMGQFEHPNIIRLE 83
Query: 152 GCCIDKDEKILIYEYMPNKSLDFFL------------------FDPTKRMLLDWSANYSS 193
G + +++ E+M N +LD FL R L + S Y
Sbjct: 84 GVVTNSMPVMILTEFMENGALDSFLRLNDGQFTVIQLVGMLRGIASGMRYLAEMS--YVH 141
Query: 194 R-LKVSNILLDKDINPKISDFGMARICGGNELQANTSRIVG---TYGYMSPEYAIQGIFS 249
R L NIL++ ++ K+SDFG++R N + +G + +PE F+
Sbjct: 142 RDLAARNILVNSNLVCKVSDFGLSRFLEENSSDPTETSSLGGKIPIRWTAPEAIAFRKFT 201
Query: 250 IKSDVFSFGVLLLEIVS-GKKTTGFYRTDSLTLLGYAWDLWTSNRTLELID-----PILE 303
SD +S+G+++ E++S G++ WD+ ++ + I+ P
Sbjct: 202 SASDAWSYGIVMWEVMSFGERPY--------------WDM-SNQDVINAIEQDYRLPPPP 246
Query: 304 DEYSSKHMLLRYVNIALLCVQESADDRPTMNEVVSML 340
D +S H L+ L C Q+ + RP +VVS L
Sbjct: 247 DCPTSLHQLM------LDCWQKDRNARPRFPQVVSAL 277
>pdb|3W2O|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Tak-285
pdb|3W2P|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Compound 2
pdb|3W2Q|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Hki-272
pdb|3W2R|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Compound 4
Length = 331
Score = 71.2 bits (173), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 57/201 (28%), Positives = 101/201 (50%), Gaps = 24/201 (11%)
Query: 89 NKFSDANKLGEGGFGPVYKGV-LKKGDEI----AVKRL-PGRSGQGLREMKNEASVIAKV 142
+F LG G FG VYKG+ + +G+++ A+K L S + +E+ +EA V+A V
Sbjct: 19 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASV 78
Query: 143 QHKNLVRLLGCCIDKDEKILIYEYMPNKSLDFFLFDPT----KRMLLDWSA------NY- 191
+ ++ RLLG C+ + LI + MP L ++ + + LL+W NY
Sbjct: 79 DNPHVCRLLGICLTSTVQ-LIMQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYL 137
Query: 192 ------SSRLKVSNILLDKDINPKISDFGMARICGGNELQANTSRIVGTYGYMSPEYAIQ 245
L N+L+ + KI+DFG A++ G E + + +M+ E +
Sbjct: 138 EDRRLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGGKVPIKWMALESILH 197
Query: 246 GIFSIKSDVFSFGVLLLEIVS 266
I++ +SDV+S+GV + E+++
Sbjct: 198 RIYTHQSDVWSYGVTVWELMT 218
>pdb|3P86|A Chain A, Crystal Structure Of Ctr1 Kinase Domain Mutant D676n In
Complex With Staurosporine
pdb|3P86|B Chain B, Crystal Structure Of Ctr1 Kinase Domain Mutant D676n In
Complex With Staurosporine
Length = 309
Score = 71.2 bits (173), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 55/200 (27%), Positives = 94/200 (47%), Gaps = 26/200 (13%)
Query: 96 KLGEGGFGPVYKGVLKKGDEIAVKRLPGRSGQGLR--EMKNEASVIAKVQHKNLVRLLGC 153
K+G G FG V++ G ++AVK L + R E E +++ +++H N+V +G
Sbjct: 44 KIGAGSFGTVHRAEWH-GSDVAVKILMEQDFHAERVNEFLREVAIMKRLRHPNIVLFMGA 102
Query: 154 CIDKDEKILIYEYMPNKSLDFFL--------FDPTKRMLLDWSA----NY---------S 192
++ EY+ SL L D +R+ + + NY
Sbjct: 103 VTQPPNLSIVTEYLSRGSLYRLLHKSGAREQLDERRRLSMAYDVAKGMNYLHNRNPPIVH 162
Query: 193 SRLKVSNILLDKDINPKISDFGMARICGGNELQANTSRIVGTYGYMSPEYAIQGIFSIKS 252
LK N+L+DK K+ DFG++R+ L + ++ GT +M+PE + KS
Sbjct: 163 RNLKSPNLLVDKKYTVKVCDFGLSRLKASTFLSSKSA--AGTPEWMAPEVLRDEPSNEKS 220
Query: 253 DVFSFGVLLLEIVSGKKTTG 272
DV+SFGV+L E+ + ++ G
Sbjct: 221 DVYSFGVILWELATLQQPWG 240
>pdb|1RQQ|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With The Sh2 Domain Of Aps
pdb|1RQQ|B Chain B, Crystal Structure Of The Insulin Receptor Kinase In
Complex With The Sh2 Domain Of Aps
pdb|2AUH|A Chain A, Crystal Structure Of The Grb14 Bps Region In Complex With
The Insulin Receptor Tyrosine Kinase
pdb|2B4S|B Chain B, Crystal Structure Of A Complex Between Ptp1b And The
Insulin Receptor Tyrosine Kinase
pdb|2B4S|D Chain D, Crystal Structure Of A Complex Between Ptp1b And The
Insulin Receptor Tyrosine Kinase
pdb|3BU3|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Peptide
pdb|3BU5|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Peptide And Atp
pdb|3BU6|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Phosphopeptide
Length = 306
Score = 71.2 bits (173), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 74/287 (25%), Positives = 122/287 (42%), Gaps = 48/287 (16%)
Query: 96 KLGEGGFGPVYKGVLK---KGD---EIAVKRLPGRSGQGLR-EMKNEASVIAKVQHKNLV 148
+LG+G FG VY+G + KG+ +AVK + + R E NEASV+ ++V
Sbjct: 24 ELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVV 83
Query: 149 RLLGCCIDKDEKILIYEYMPNKSLDFFLFD-------------PTKRMLLDWSANYSS-- 193
RLLG +++ E M + L +L PT + ++ +A +
Sbjct: 84 RLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGM 143
Query: 194 -----------RLKVSNILLDKDINPKISDFGMARICGGNELQANTSRIVGTYGYMSPEY 242
L N ++ D KI DFGM R + + + +M+PE
Sbjct: 144 AYLNAKKFVHRDLAARNCMVAHDFTVKIGDFGMTRDIXETDXXRKGGKGLLPVRWMAPES 203
Query: 243 AIQGIFSIKSDVFSFGVLLLEIVSGKKTTGFYRTDSLTLLGYAWDLWTSNRTLELIDPIL 302
G+F+ SD++SFGV+L EI S + + + +L + D L+ D
Sbjct: 204 LKDGVFTTSSDMWSFGVVLWEITSLAEQP-YQGLSNEQVLKFVMD----GGYLDQPDNCP 258
Query: 303 EDEYSSKHMLLRYVNIALLCVQESADDRPTMNEVVSMLTDEAAALFP 349
E R ++ +C Q + + RPT E+V++L D+ FP
Sbjct: 259 E----------RVTDLMRMCWQFNPNMRPTFLEIVNLLKDDLHPSFP 295
>pdb|2R2P|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 5 (Epha5)
Length = 295
Score = 71.2 bits (173), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 74/273 (27%), Positives = 127/273 (46%), Gaps = 50/273 (18%)
Query: 97 LGEGGFGPVYKGVLK----KGDEIAVKRLP-GRSGQGLREMKNEASVIAKVQHKNLVRLL 151
+G G FG V G LK + +A+K L G + + R+ EAS++ + H N++ L
Sbjct: 30 IGAGEFGEVCSGRLKLPGKRELPVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIHLE 89
Query: 152 GCCIDKDEKILIYEYMPNKSLDFFLFDPTKR--------MLLDWSA--------NYSSR- 194
G +++ EYM N SLD FL + ML SA Y R
Sbjct: 90 GVVTKSKPVMIVTEYMENGSLDTFLKKNDGQFTVIQLVGMLRGISAGMKYLSDMGYVHRD 149
Query: 195 LKVSNILLDKDINPKISDFGMARICGGNELQANTSRIVGT-YGYMSPEYAIQGIFSIKSD 253
L NIL++ ++ K+SDFG++R+ + A T+R + +PE F+ SD
Sbjct: 150 LAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTAPEAIAFRKFTSASD 209
Query: 254 VFSFGVLLLEIVS-GKKTTGFYRTDSLTLLGYAWDLWTSNRTLELID-----PILEDEYS 307
V+S+G+++ E+VS G++ W++ T+ ++ ++ P D +
Sbjct: 210 VWSYGIVMWEVVSYGERPY--------------WEM-TNQDVIKAVEEGYRLPSPMDCPA 254
Query: 308 SKHMLLRYVNIALLCVQESADDRPTMNEVVSML 340
+ + L+ L C Q+ + RP +E+V+ML
Sbjct: 255 ALYQLM------LDCWQKERNSRPKFDEIVNML 281
>pdb|4I1Z|A Chain A, Crystal Structure Of The Monomeric (v948r) Form Of The
Gefitinib/erlotinib Resistant Egfr Kinase Domain
L858r+t790m
pdb|4I22|A Chain A, Structure Of The Monomeric (v948r)gefitinib/erlotinib
Resistant Double Mutant (l858r+t790m) Egfr Kinase Domain
Co-crystallized With Gefitinib
Length = 329
Score = 71.2 bits (173), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 57/201 (28%), Positives = 101/201 (50%), Gaps = 24/201 (11%)
Query: 89 NKFSDANKLGEGGFGPVYKGV-LKKGDEI----AVKRL-PGRSGQGLREMKNEASVIAKV 142
+F LG G FG VYKG+ + +G+++ A+K L S + +E+ +EA V+A V
Sbjct: 17 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASV 76
Query: 143 QHKNLVRLLGCCIDKDEKILIYEYMPNKSLDFFLFDPT----KRMLLDWSA------NY- 191
+ ++ RLLG C+ + LI + MP L ++ + + LL+W NY
Sbjct: 77 DNPHVCRLLGICLTSTVQ-LIMQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYL 135
Query: 192 ------SSRLKVSNILLDKDINPKISDFGMARICGGNELQANTSRIVGTYGYMSPEYAIQ 245
L N+L+ + KI+DFG A++ G E + + +M+ E +
Sbjct: 136 EDRRLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGGKVPIKWMALESILH 195
Query: 246 GIFSIKSDVFSFGVLLLEIVS 266
I++ +SDV+S+GV + E+++
Sbjct: 196 RIYTHQSDVWSYGVTVWELMT 216
>pdb|4I21|A Chain A, Crystal Structure Of L858r + T790m Egfr Kinase Domain In
Complex With Mig6 Peptide
pdb|4I21|B Chain B, Crystal Structure Of L858r + T790m Egfr Kinase Domain In
Complex With Mig6 Peptide
Length = 329
Score = 71.2 bits (173), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 57/201 (28%), Positives = 101/201 (50%), Gaps = 24/201 (11%)
Query: 89 NKFSDANKLGEGGFGPVYKGV-LKKGDEI----AVKRL-PGRSGQGLREMKNEASVIAKV 142
+F LG G FG VYKG+ + +G+++ A+K L S + +E+ +EA V+A V
Sbjct: 17 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASV 76
Query: 143 QHKNLVRLLGCCIDKDEKILIYEYMPNKSLDFFLFDPT----KRMLLDWSA------NY- 191
+ ++ RLLG C+ + LI + MP L ++ + + LL+W NY
Sbjct: 77 DNPHVCRLLGICLTSTVQ-LIMQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYL 135
Query: 192 ------SSRLKVSNILLDKDINPKISDFGMARICGGNELQANTSRIVGTYGYMSPEYAIQ 245
L N+L+ + KI+DFG A++ G E + + +M+ E +
Sbjct: 136 EDRRLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGGKVPIKWMALESILH 195
Query: 246 GIFSIKSDVFSFGVLLLEIVS 266
I++ +SDV+S+GV + E+++
Sbjct: 196 RIYTHQSDVWSYGVTVWELMT 216
>pdb|4GT4|A Chain A, Structure Of Unliganded, Inactive Ror2 Kinase Domain
pdb|4GT4|B Chain B, Structure Of Unliganded, Inactive Ror2 Kinase Domain
Length = 308
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 75/255 (29%), Positives = 125/255 (49%), Gaps = 63/255 (24%)
Query: 56 IELPVNSKQTKRSKKKEVDQLPLFSFSSVSTATNKFSDANKLGEGGFGPVYKGVL----- 110
+E+P+ + Q K++K KE+ S S+V +F + +LGE FG VYKG L
Sbjct: 7 MEMPLIN-QHKQAKLKEI------SLSAV-----RFME--ELGEDRFGKVYKGHLFGPAP 52
Query: 111 -KKGDEIAVKRLPGRSGQGLRE-MKNEASVIAKVQHKNLVRLLGCCIDKDEKI-LIYEYM 167
++ +A+K L ++ LRE ++EA + A++QH N+V LLG + KD+ + +I+ Y
Sbjct: 53 GEQTQAVAIKTLKDKAEGPLREEFRHEAMLRARLQHPNVVCLLG-VVTKDQPLSMIFSYC 111
Query: 168 PNKSLDFFLF-------------DPTKRMLLD-----------------WSANY--SSRL 195
+ L FL D T + L+ S+++ L
Sbjct: 112 SHGDLHEFLVMRSPHSDVGSTDDDRTVKSALEPPDFVHLVAQIAAGMEYLSSHHVVHKDL 171
Query: 196 KVSNILLDKDINPKISDFGMARICGGNELQANTSRIVGT----YGYMSPEYAIQGIFSIK 251
N+L+ +N KISD G+ R A+ +++G +M+PE + G FSI
Sbjct: 172 ATRNVLVYDKLNVKISDLGLFR----EVYAADYYKLLGNSLLPIRWMAPEAIMYGKFSID 227
Query: 252 SDVFSFGVLLLEIVS 266
SD++S+GV+L E+ S
Sbjct: 228 SDIWSYGVVLWEVFS 242
>pdb|3NZ0|A Chain A, Non-Phosphorylated Tyk2 Kinase With Cmp6
Length = 302
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 69/230 (30%), Positives = 102/230 (44%), Gaps = 30/230 (13%)
Query: 97 LGEGGFG--------PVYKGVLKKGDEIAVKRLPGRSGQGLRE-MKNEASVIAKVQHKNL 147
LGEG FG P G G+ +AVK L G R K E ++ + H+++
Sbjct: 22 LGEGHFGKVSLYCYDPTNDGT---GEMVAVKALKADCGPQHRSGWKQEIDILRTLYHEHI 78
Query: 148 VRLLGCCIDKDEK--ILIYEYMPNKSLD--------------FFLFDPTKRMLLDWSANY 191
++ GCC D+ EK L+ EY+P SL F + M + +Y
Sbjct: 79 IKYKGCCEDQGEKSLQLVMEYVPLGSLRDYLPRHSIGLAQLLLFAQQICEGMAYLHAQHY 138
Query: 192 SSR-LKVSNILLDKDINPKISDFGMAR-ICGGNELQANTSRIVGTYGYMSPEYAIQGIFS 249
R L N+LLD D KI DFG+A+ + G+E + +PE + F
Sbjct: 139 IHRNLAARNVLLDNDRLVKIGDFGLAKAVPEGHEYYRVREDGDSPVFWYAPECLKEYKFY 198
Query: 250 IKSDVFSFGVLLLEIVSGKKTTGFYRTDSLTLLGYAWDLWTSNRTLELID 299
SDV+SFGV L E+++ ++ T L L+G A T R EL++
Sbjct: 199 YASDVWSFGVTLYELLTHCDSSQSPPTKFLELIGIAQGQMTVLRLTELLE 248
>pdb|4AW5|A Chain A, Complex Of The Ephb4 Kinase Domain With An Oxindole
Inhibitor
Length = 291
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 74/277 (26%), Positives = 125/277 (45%), Gaps = 56/277 (20%)
Query: 97 LGEGGFGPVYKGVLK----KGDEIAVKRLPG-RSGQGLREMKNEASVIAKVQHKNLVRLL 151
+G G FG V +G LK K +A+K L G + + RE +EAS++ + +H N++RL
Sbjct: 22 IGAGEFGEVCRGRLKAPGKKESCVAIKTLKGGYTERQRREFLSEASIMGQFEHPNIIRLE 81
Query: 152 GCCIDKDEKILIYEYMPNKSLDFFL------------------FDPTKRMLLDWSANYSS 193
G + +++ E+M N +LD FL R L + S Y
Sbjct: 82 GVVTNSMPVMILTEFMENGALDSFLRLNDGQFTVIQLVGMLRGIASGMRYLAEMS--YVH 139
Query: 194 R-LKVSNILLDKDINPKISDFGMARICGGNELQANTSRIVG---TYGYMSPEYAIQGIFS 249
R L NIL++ ++ K+SDFG++R N + +G + +PE F+
Sbjct: 140 RDLAARNILVNSNLVCKVSDFGLSRFLEENSSDPTYTSSLGGKIPIRWTAPEAIAFRKFT 199
Query: 250 IKSDVFSFGVLLLEIVS-GKKTTGFYRTDSLTLLGYAWDLWTSNRTLELID-----PILE 303
SD +S+G+++ E++S G++ WD+ ++ + I+ P
Sbjct: 200 SASDAWSYGIVMWEVMSFGERPY--------------WDM-SNQDVINAIEQDYRLPPPP 244
Query: 304 DEYSSKHMLLRYVNIALLCVQESADDRPTMNEVVSML 340
D +S H L+ L C Q+ + RP +VVS L
Sbjct: 245 DCPTSLHQLM------LDCWQKDRNARPRFPQVVSAL 275
>pdb|2QON|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:y742a Triple Mutant
Length = 373
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 77/293 (26%), Positives = 132/293 (45%), Gaps = 53/293 (18%)
Query: 78 LFSFSSVSTATNKFSDANKLGEGGFGPVYKGVLK----KGDEIAVKRLP-GRSGQGLREM 132
+ F+ ATN S +G G FG V G LK K +A+K L G + + R+
Sbjct: 35 VHEFAKELDATN-ISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDF 93
Query: 133 KNEASVIAKVQHKNLVRLLGCCIDKDEKILIYEYMPNKSLDFFL---------------- 176
EAS++ + H N++RL G +++ E M N SLD FL
Sbjct: 94 LGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEXMENGSLDSFLRKHDAQFTVIQLVGML 153
Query: 177 --FDPTKRMLLDWSANYSSRLKVSNILLDKDINPKISDFGMARICGGNELQANTSRIVGT 234
+ L D A + L NIL++ ++ K+SDFG++R+ + A T+R
Sbjct: 154 RGIASGMKYLSDMGAVHRD-LAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKI 212
Query: 235 -YGYMSPEYAIQGIFSIKSDVFSFGVLLLEIVS-GKKTTGFYRTDSLTLLGYAWDLWTSN 292
+ SPE F+ SDV+S+G++L E++S G++ W++ ++
Sbjct: 213 PIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPY--------------WEM-SNQ 257
Query: 293 RTLELID-----PILEDEYSSKHMLLRYVNIALLCVQESADDRPTMNEVVSML 340
++ +D P D ++ + L+ L C Q+ ++RP ++VS+L
Sbjct: 258 DVIKAVDEGYRLPPPMDCPAALYQLM------LDCWQKDRNNRPKFEQIVSIL 304
>pdb|2ITT|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Aee788
pdb|2ITU|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Afn941
pdb|2ITV|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Amp-pnp
pdb|2ITZ|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Iressa
Length = 327
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 57/201 (28%), Positives = 101/201 (50%), Gaps = 24/201 (11%)
Query: 89 NKFSDANKLGEGGFGPVYKGV-LKKGDEI----AVKRL-PGRSGQGLREMKNEASVIAKV 142
+F LG G FG VYKG+ + +G+++ A+K L S + +E+ +EA V+A V
Sbjct: 15 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASV 74
Query: 143 QHKNLVRLLGCCIDKDEKILIYEYMPNKSLDFFLFDPT----KRMLLDWSA------NY- 191
+ ++ RLLG C+ + LI + MP L ++ + + LL+W NY
Sbjct: 75 DNPHVCRLLGICLTSTVQ-LITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYL 133
Query: 192 ------SSRLKVSNILLDKDINPKISDFGMARICGGNELQANTSRIVGTYGYMSPEYAIQ 245
L N+L+ + KI+DFG A++ G E + + +M+ E +
Sbjct: 134 EDRRLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGGKVPIKWMALESILH 193
Query: 246 GIFSIKSDVFSFGVLLLEIVS 266
I++ +SDV+S+GV + E+++
Sbjct: 194 RIYTHQSDVWSYGVTVWELMT 214
>pdb|3EKK|A Chain A, Insulin Receptor Kinase Complexed With An Inhibitor
pdb|3EKN|A Chain A, Insulin Receptor Kinase Complexed With An Inhibitor
Length = 307
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 74/287 (25%), Positives = 122/287 (42%), Gaps = 48/287 (16%)
Query: 96 KLGEGGFGPVYKGVLK---KGD---EIAVKRLPGRSGQGLR-EMKNEASVIAKVQHKNLV 148
+LG+G FG VY+G + KG+ +AVK + + R E NEASV+ ++V
Sbjct: 25 ELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVV 84
Query: 149 RLLGCCIDKDEKILIYEYMPNKSLDFFLFD-------------PTKRMLLDWSANYSS-- 193
RLLG +++ E M + L +L PT + ++ +A +
Sbjct: 85 RLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGM 144
Query: 194 -----------RLKVSNILLDKDINPKISDFGMARICGGNELQANTSRIVGTYGYMSPEY 242
L N ++ D KI DFGM R + + + +M+PE
Sbjct: 145 AYLNAKKFVHRNLAARNCMVAHDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMAPES 204
Query: 243 AIQGIFSIKSDVFSFGVLLLEIVSGKKTTGFYRTDSLTLLGYAWDLWTSNRTLELIDPIL 302
G+F+ SD++SFGV+L EI S + + + +L + D L+ D
Sbjct: 205 LKDGVFTTSSDMWSFGVVLWEITSLAEQP-YQGLSNEQVLKFVMD----GGYLDQPDNCP 259
Query: 303 EDEYSSKHMLLRYVNIALLCVQESADDRPTMNEVVSMLTDEAAALFP 349
E R ++ +C Q + + RPT E+V++L D+ FP
Sbjct: 260 E----------RVTDLMRMCWQFNPNMRPTFLEIVNLLKDDLHPSFP 296
>pdb|4I20|A Chain A, Crystal Structure Of Monomeric (v948r) Primary Oncogenic
Mutant L858r Egfr Kinase Domain
Length = 329
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 57/201 (28%), Positives = 101/201 (50%), Gaps = 24/201 (11%)
Query: 89 NKFSDANKLGEGGFGPVYKGV-LKKGDEI----AVKRL-PGRSGQGLREMKNEASVIAKV 142
+F LG G FG VYKG+ + +G+++ A+K L S + +E+ +EA V+A V
Sbjct: 17 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASV 76
Query: 143 QHKNLVRLLGCCIDKDEKILIYEYMPNKSLDFFLFDPT----KRMLLDWSA------NY- 191
+ ++ RLLG C+ + LI + MP L ++ + + LL+W NY
Sbjct: 77 DNPHVCRLLGICLTSTVQ-LITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYL 135
Query: 192 ------SSRLKVSNILLDKDINPKISDFGMARICGGNELQANTSRIVGTYGYMSPEYAIQ 245
L N+L+ + KI+DFG A++ G E + + +M+ E +
Sbjct: 136 EDRRLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGGKVPIKWMALESILH 195
Query: 246 GIFSIKSDVFSFGVLLLEIVS 266
I++ +SDV+S+GV + E+++
Sbjct: 196 RIYTHQSDVWSYGVTVWELMT 216
>pdb|1P14|A Chain A, Crystal Structure Of A Catalytic-Loop Mutant Of The
Insulin Receptor Tyrosine Kinase
Length = 306
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 74/287 (25%), Positives = 122/287 (42%), Gaps = 48/287 (16%)
Query: 96 KLGEGGFGPVYKGVLK---KGD---EIAVKRLPGRSGQGLR-EMKNEASVIAKVQHKNLV 148
+LG+G FG VY+G + KG+ +AVK + + R E NEASV+ ++V
Sbjct: 24 ELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVV 83
Query: 149 RLLGCCIDKDEKILIYEYMPNKSLDFFLFD-------------PTKRMLLDWSANYSS-- 193
RLLG +++ E M + L +L PT + ++ +A +
Sbjct: 84 RLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGM 143
Query: 194 -----------RLKVSNILLDKDINPKISDFGMARICGGNELQANTSRIVGTYGYMSPEY 242
L N ++ D KI DFGM R + + + +M+PE
Sbjct: 144 AYLNAKKFVHRNLAARNCMVAHDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMAPES 203
Query: 243 AIQGIFSIKSDVFSFGVLLLEIVSGKKTTGFYRTDSLTLLGYAWDLWTSNRTLELIDPIL 302
G+F+ SD++SFGV+L EI S + + + +L + D L+ D
Sbjct: 204 LKDGVFTTSSDMWSFGVVLWEITSLAEQP-YQGLSNEQVLKFVMD----GGYLDQPDNCP 258
Query: 303 EDEYSSKHMLLRYVNIALLCVQESADDRPTMNEVVSMLTDEAAALFP 349
E R ++ +C Q + + RPT E+V++L D+ FP
Sbjct: 259 E----------RVTDLMRMCWQFNPNMRPTFLEIVNLLKDDLHPSFP 295
>pdb|1K3A|A Chain A, Structure Of The Insulin-Like Growth Factor 1 Receptor
Kinase
Length = 299
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 78/307 (25%), Positives = 126/307 (41%), Gaps = 54/307 (17%)
Query: 86 TATNKFSDANKLGEGGFGPVYKGVLKK--GDE----IAVKRLPGRSGQGLR-EMKNEASV 138
A K + + +LG+G FG VY+GV K DE +A+K + + R E NEASV
Sbjct: 7 VAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASV 66
Query: 139 IAKVQHKNLVRLLGCCIDKDEKILIYEYMPNKSLDFFLFDPTKRM--------------- 183
+ + ++VRLLG ++I E M L +L M
Sbjct: 67 MKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMI 126
Query: 184 -----------LLDWSANYSSRLKVSNILLDKDINPKISDFGMARICGGNELQANTSRIV 232
L+ + L N ++ +D KI DFGM R + + +
Sbjct: 127 QMAGEIADGMAYLNANKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIXETDXXRKGGKGL 186
Query: 233 GTYGYMSPEYAIQGIFSIKSDVFSFGVLLLEIVSGKKTTGFYRTDSLTLLGYAWDLWTSN 292
+MSPE G+F+ SDV+SFGV+L EI TL + ++
Sbjct: 187 LPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIA--------------TLAEQPYQGLSNE 232
Query: 293 RTLELI--DPILEDEYSSKHMLLRYVNIALLCVQESADDRPTMNEVVSMLTDEAAALFPP 350
+ L + +L+ + MLL + +C Q + RP+ E++S + +E F
Sbjct: 233 QVLRFVMEGGLLDKPDNCPDMLLELMR---MCWQYNPKMRPSFLEIISSIKEEMEPGF-- 287
Query: 351 KQPAFSY 357
++ +F Y
Sbjct: 288 REVSFYY 294
>pdb|2EB3|A Chain A, Crystal Structure Of Mutated Egfr Kinase Domain (L858r) In
Complex With Amppnp
Length = 334
Score = 70.5 bits (171), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 57/201 (28%), Positives = 101/201 (50%), Gaps = 24/201 (11%)
Query: 89 NKFSDANKLGEGGFGPVYKGV-LKKGDEI----AVKRL-PGRSGQGLREMKNEASVIAKV 142
+F LG G FG VYKG+ + +G+++ A+K L S + +E+ +EA V+A V
Sbjct: 22 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASV 81
Query: 143 QHKNLVRLLGCCIDKDEKILIYEYMPNKSLDFFLFDPT----KRMLLDWSA------NY- 191
+ ++ RLLG C+ + LI + MP L ++ + + LL+W NY
Sbjct: 82 DNPHVCRLLGICLTSTVQ-LITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYL 140
Query: 192 ------SSRLKVSNILLDKDINPKISDFGMARICGGNELQANTSRIVGTYGYMSPEYAIQ 245
L N+L+ + KI+DFG A++ G E + + +M+ E +
Sbjct: 141 EDRRLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGGKVPIKWMALESILH 200
Query: 246 GIFSIKSDVFSFGVLLLEIVS 266
I++ +SDV+S+GV + E+++
Sbjct: 201 RIYTHQSDVWSYGVTVWELMT 221
>pdb|2Z8C|A Chain A, Phosphorylated Insulin Receptor Tyrosine Kinase In Complex
With (4-{[5-Carbamoyl-4-(3-Methylanilino)pyrimidin-2-
Yl]amino}phenyl)acetic Acid
Length = 303
Score = 70.5 bits (171), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 74/287 (25%), Positives = 121/287 (42%), Gaps = 48/287 (16%)
Query: 96 KLGEGGFGPVYKGVLK---KGD---EIAVKRLPGRSGQGLR-EMKNEASVIAKVQHKNLV 148
+LG+G FG VY+G + KG+ +AVK + + R E NEASV+ ++V
Sbjct: 21 ELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVV 80
Query: 149 RLLGCCIDKDEKILIYEYMPNKSLDFFLFD-------------PTKRMLLDWSANYSS-- 193
RLLG +++ E M + L +L PT + ++ +A +
Sbjct: 81 RLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGM 140
Query: 194 -----------RLKVSNILLDKDINPKISDFGMARICGGNELQANTSRIVGTYGYMSPEY 242
L N ++ D KI DFGM R + + + +M+PE
Sbjct: 141 AYLNAKKFVHRDLAARNCMVAHDFTVKIGDFGMTRDIXETDXXRKGGKGLLPVRWMAPES 200
Query: 243 AIQGIFSIKSDVFSFGVLLLEIVSGKKTTGFYRTDSLTLLGYAWDLWTSNRTLELIDPIL 302
G+F+ SD++SFGV+L EI S + + + +L + D L+ D
Sbjct: 201 LKDGVFTTSSDMWSFGVVLWEITSLAEQP-YQGLSNEQVLKFVMD----GGYLDQPDNCP 255
Query: 303 EDEYSSKHMLLRYVNIALLCVQESADDRPTMNEVVSMLTDEAAALFP 349
E R ++ +C Q + RPT E+V++L D+ FP
Sbjct: 256 E----------RVTDLMRMCWQFNPKMRPTFLEIVNLLKDDLHPSFP 292
>pdb|1IR3|A Chain A, Phosphorylated Insulin Receptor Tyrosine Kinase In Complex
With Peptide Substrate And Atp Analog
pdb|1GAG|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With A Bisubstrate Inhibitor
Length = 306
Score = 70.5 bits (171), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 74/287 (25%), Positives = 121/287 (42%), Gaps = 48/287 (16%)
Query: 96 KLGEGGFGPVYKGVLK---KGD---EIAVKRLPGRSGQGLR-EMKNEASVIAKVQHKNLV 148
+LG+G FG VY+G + KG+ +AVK + + R E NEASV+ ++V
Sbjct: 24 ELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVV 83
Query: 149 RLLGCCIDKDEKILIYEYMPNKSLDFFLFD-------------PTKRMLLDWSANYSS-- 193
RLLG +++ E M + L +L PT + ++ +A +
Sbjct: 84 RLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGM 143
Query: 194 -----------RLKVSNILLDKDINPKISDFGMARICGGNELQANTSRIVGTYGYMSPEY 242
L N ++ D KI DFGM R + + + +M+PE
Sbjct: 144 AYLNAKKFVHRDLAARNCMVAHDFTVKIGDFGMTRDIXETDXXRKGGKGLLPVRWMAPES 203
Query: 243 AIQGIFSIKSDVFSFGVLLLEIVSGKKTTGFYRTDSLTLLGYAWDLWTSNRTLELIDPIL 302
G+F+ SD++SFGV+L EI S + + + +L + D L+ D
Sbjct: 204 LKDGVFTTSSDMWSFGVVLWEITSLAEQP-YQGLSNEQVLKFVMD----GGYLDQPDNCP 258
Query: 303 EDEYSSKHMLLRYVNIALLCVQESADDRPTMNEVVSMLTDEAAALFP 349
E R ++ +C Q + RPT E+V++L D+ FP
Sbjct: 259 E----------RVTDLMRMCWQFNPKMRPTFLEIVNLLKDDLHPSFP 295
>pdb|3GOP|A Chain A, Crystal Structure Of The Egf Receptor Juxtamembrane And
Kinase Domains
Length = 361
Score = 70.5 bits (171), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 56/201 (27%), Positives = 101/201 (50%), Gaps = 24/201 (11%)
Query: 89 NKFSDANKLGEGGFGPVYKGV-LKKGDEI----AVKRL-PGRSGQGLREMKNEASVIAKV 142
+F LG G FG VYKG+ + +G+++ A+ L S + +E+ +EA V+A V
Sbjct: 49 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIMELREATSPKANKEILDEAYVMASV 108
Query: 143 QHKNLVRLLGCCIDKDEKILIYEYMPNKSLDFFLFDPT----KRMLLDWSA------NY- 191
+ ++ RLLG C+ + LI + MP L ++ + + LL+W NY
Sbjct: 109 DNPHVCRLLGICLTSTVQ-LITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYL 167
Query: 192 ------SSRLKVSNILLDKDINPKISDFGMARICGGNELQANTSRIVGTYGYMSPEYAIQ 245
L N+L+ + KI+DFG+A++ G E + + +M+ E +
Sbjct: 168 EDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILH 227
Query: 246 GIFSIKSDVFSFGVLLLEIVS 266
I++ +SDV+S+GV + E+++
Sbjct: 228 RIYTHQSDVWSYGVTVWELMT 248
>pdb|4FNW|A Chain A, Crystal Structure Of The Apo F1174l Anaplastic Lymphoma
Kinase Catalytic Domain
Length = 327
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 69/245 (28%), Positives = 106/245 (43%), Gaps = 49/245 (20%)
Query: 67 RSKKKEVDQLPLFSFSSVSTATNKFSDANK--------LGEGGFGPVYKGVLKKGD---- 114
R+ D P +SF+ +++ + + + LG G FG VY+G +
Sbjct: 1 RTSTIMTDYNPNYSFAGKTSSISDLKEVPRKNITLIRGLGHGAFGEVYEGQVSGMPNDPS 60
Query: 115 --EIAVKRLPGR-SGQGLREMKNEASVIAKVQHKNLVRLLGCCIDKDEKILIYEYMPNKS 171
++AVK LP S Q + EA +I+K+ H+N+VR +G + + ++ E M
Sbjct: 61 PLQVAVKTLPEVCSEQDELDFLMEALIISKLNHQNIVRCIGVSLQSLPRFILLELMAGGD 120
Query: 172 LDFFLFDPTKRMLLDWSANYSSRLKVS------------NILLDKDIN------------ 207
L FL + R S L V+ N + +DI
Sbjct: 121 LKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEENHFIHRDIAARNCLLTCPGPG 180
Query: 208 --PKISDFGMARICGGNELQANTSRIVGT----YGYMSPEYAIQGIFSIKSDVFSFGVLL 261
KI DFGMAR + +A+ R G +M PE ++GIF+ K+D +SFGVLL
Sbjct: 181 RVAKIGDFGMAR----DIYRASYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLL 236
Query: 262 LEIVS 266
EI S
Sbjct: 237 WEIFS 241
>pdb|2QO7|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Dephosphorylated, Amp-Pnp Bound
pdb|2QOQ|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Base, Amp-Pnp
Bound Structure
Length = 373
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 78/292 (26%), Positives = 134/292 (45%), Gaps = 51/292 (17%)
Query: 78 LFSFSSVSTATNKFSDANKLGEGGFGPVYKGVLK----KGDEIAVKRLP-GRSGQGLREM 132
+ F+ ATN S +G G FG V G LK K +A+K L G + + R+
Sbjct: 35 VHEFAKELDATN-ISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDF 93
Query: 133 KNEASVIAKVQHKNLVRLLGCCIDKDEKILIYEYMPNKSLDFFLFDPTKR--------ML 184
EAS++ + H N++RL G +++ E M N SLD FL + ML
Sbjct: 94 LGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEXMENGSLDSFLRKHDAQFTVIQLVGML 153
Query: 185 LDWSA--------NYSSR-LKVSNILLDKDINPKISDFGMARICGGNELQANTSRIVGT- 234
++ Y R L NIL++ ++ K+SDFG++R+ + A T+R
Sbjct: 154 RGIASGMKYLSDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIP 213
Query: 235 YGYMSPEYAIQGIFSIKSDVFSFGVLLLEIVS-GKKTTGFYRTDSLTLLGYAWDLWTSNR 293
+ SPE F+ SDV+S+G++L E++S G++ W++ ++
Sbjct: 214 IRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPY--------------WEM-SNQD 258
Query: 294 TLELID-----PILEDEYSSKHMLLRYVNIALLCVQESADDRPTMNEVVSML 340
++ +D P D ++ + L+ L C Q+ ++RP ++VS+L
Sbjct: 259 VIKAVDEGYRLPPPMDCPAALYQLM------LDCWQKDRNNRPKFEQIVSIL 304
>pdb|2QOB|A Chain A, Human Epha3 Kinase Domain, Base Structure
Length = 344
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 78/292 (26%), Positives = 134/292 (45%), Gaps = 51/292 (17%)
Query: 78 LFSFSSVSTATNKFSDANKLGEGGFGPVYKGVLK----KGDEIAVKRLP-GRSGQGLREM 132
+ F+ ATN S +G G FG V G LK K +A+K L G + + R+
Sbjct: 6 VHEFAKELDATN-ISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDF 64
Query: 133 KNEASVIAKVQHKNLVRLLGCCIDKDEKILIYEYMPNKSLDFFLFDPTKR--------ML 184
EAS++ + H N++RL G +++ E M N SLD FL + ML
Sbjct: 65 LGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEXMENGSLDSFLRKHDAQFTVIQLVGML 124
Query: 185 LDWSA--------NYSSR-LKVSNILLDKDINPKISDFGMARICGGNELQANTSRIVGT- 234
++ Y R L NIL++ ++ K+SDFG++R+ + A T+R
Sbjct: 125 RGIASGMKYLSDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIP 184
Query: 235 YGYMSPEYAIQGIFSIKSDVFSFGVLLLEIVS-GKKTTGFYRTDSLTLLGYAWDLWTSNR 293
+ SPE F+ SDV+S+G++L E++S G++ W++ ++
Sbjct: 185 IRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPY--------------WEM-SNQD 229
Query: 294 TLELID-----PILEDEYSSKHMLLRYVNIALLCVQESADDRPTMNEVVSML 340
++ +D P D ++ + L+ L C Q+ ++RP ++VS+L
Sbjct: 230 VIKAVDEGYRLPPPMDCPAALYQLM------LDCWQKDRNNRPKFEQIVSIL 275
>pdb|2W1I|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1I|B Chain B, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 326
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 59/201 (29%), Positives = 96/201 (47%), Gaps = 33/201 (16%)
Query: 95 NKLGEGGFGPV----YKGVLKK-GDEIAVKRLPGRSGQGLREMKNEASVIAKVQHKNLVR 149
+LG+G FG V Y + G+ +AVK+L + + LR+ + E ++ +QH N+V+
Sbjct: 47 QQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVK 106
Query: 150 LLGCCIDKDEK--ILIYEYMPNKSLDFFLFDPTKRM----LLDWSAN------------Y 191
G C + LI EY+P SL +L +R+ LL +++ Y
Sbjct: 107 YKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYLGTKRY 166
Query: 192 SSR-LKVSNILLDKDINPKISDFGMARICGGNELQANTSRIVGTYG-----YMSPEYAIQ 245
R L NIL++ + KI DFG+ ++ Q V G + +PE +
Sbjct: 167 IHRDLATRNILVENENRVKIGDFGLTKVLP----QDKEXXKVKEPGESPIFWYAPESLTE 222
Query: 246 GIFSIKSDVFSFGVLLLEIVS 266
FS+ SDV+SFGV+L E+ +
Sbjct: 223 SKFSVASDVWSFGVVLYELFT 243
>pdb|2ITN|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Amp-Pnp
pdb|2ITO|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Iressa
pdb|2ITP|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Aee788
pdb|2ITQ|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Afn941
Length = 327
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 56/201 (27%), Positives = 101/201 (50%), Gaps = 24/201 (11%)
Query: 89 NKFSDANKLGEGGFGPVYKGV-LKKGDEI----AVKRL-PGRSGQGLREMKNEASVIAKV 142
+F L G FG VYKG+ + +G+++ A+K L S + +E+ +EA V+A V
Sbjct: 15 TEFKKIKVLSSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASV 74
Query: 143 QHKNLVRLLGCCIDKDEKILIYEYMPNKSLDFFLFDPT----KRMLLDWSA------NY- 191
+ ++ RLLG C+ + LI + MP L ++ + + LL+W NY
Sbjct: 75 DNPHVCRLLGICLTSTVQ-LITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYL 133
Query: 192 ------SSRLKVSNILLDKDINPKISDFGMARICGGNELQANTSRIVGTYGYMSPEYAIQ 245
L N+L+ + KI+DFG+A++ G E + + +M+ E +
Sbjct: 134 EDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILH 193
Query: 246 GIFSIKSDVFSFGVLLLEIVS 266
I++ +SDV+S+GV + E+++
Sbjct: 194 RIYTHQSDVWSYGVTVWELMT 214
>pdb|3UG1|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN The Apo Form
pdb|3UG2|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN Complex With Gefitinib
pdb|3VJN|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN Complex With Amppnp
Length = 334
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 56/201 (27%), Positives = 101/201 (50%), Gaps = 24/201 (11%)
Query: 89 NKFSDANKLGEGGFGPVYKGV-LKKGDEI----AVKRL-PGRSGQGLREMKNEASVIAKV 142
+F L G FG VYKG+ + +G+++ A+K L S + +E+ +EA V+A V
Sbjct: 22 TEFKKIKVLSSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASV 81
Query: 143 QHKNLVRLLGCCIDKDEKILIYEYMPNKSLDFFLFDPT----KRMLLDWSA------NY- 191
+ ++ RLLG C+ + LI + MP L ++ + + LL+W NY
Sbjct: 82 DNPHVCRLLGICLTSTVQ-LIMQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYL 140
Query: 192 ------SSRLKVSNILLDKDINPKISDFGMARICGGNELQANTSRIVGTYGYMSPEYAIQ 245
L N+L+ + KI+DFG+A++ G E + + +M+ E +
Sbjct: 141 EDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILH 200
Query: 246 GIFSIKSDVFSFGVLLLEIVS 266
I++ +SDV+S+GV + E+++
Sbjct: 201 RIYTHQSDVWSYGVTVWELMT 221
>pdb|2XA4|A Chain A, Inhibitors Of Jak2 Kinase Domain
pdb|2XA4|B Chain B, Inhibitors Of Jak2 Kinase Domain
Length = 298
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 59/201 (29%), Positives = 96/201 (47%), Gaps = 33/201 (16%)
Query: 95 NKLGEGGFGPV----YKGVLKK-GDEIAVKRLPGRSGQGLREMKNEASVIAKVQHKNLVR 149
+LG+G FG V Y + G+ +AVK+L + + LR+ + E ++ +QH N+V+
Sbjct: 19 QQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVK 78
Query: 150 LLGCCIDKDEK--ILIYEYMPNKSLDFFLFDPTKRM----LLDWSAN------------Y 191
G C + LI EY+P SL +L +R+ LL +++ Y
Sbjct: 79 YKGVCYSAGRRNLKLIMEYLPYGSLRDYLQAHAERIDHIKLLQYTSQICKGMEYLGTKRY 138
Query: 192 SSR-LKVSNILLDKDINPKISDFGMARICGGNELQANTSRIVGTYG-----YMSPEYAIQ 245
R L NIL++ + KI DFG+ ++ Q V G + +PE +
Sbjct: 139 IHRDLATRNILVENENRVKIGDFGLTKVLP----QDKEXXKVKEPGESPIFWYAPESLTE 194
Query: 246 GIFSIKSDVFSFGVLLLEIVS 266
FS+ SDV+SFGV+L E+ +
Sbjct: 195 SKFSVASDVWSFGVVLYELFT 215
>pdb|3E62|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
pdb|3E63|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
pdb|3E64|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
Length = 293
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 59/201 (29%), Positives = 96/201 (47%), Gaps = 33/201 (16%)
Query: 95 NKLGEGGFGPV----YKGVLKK-GDEIAVKRLPGRSGQGLREMKNEASVIAKVQHKNLVR 149
+LG+G FG V Y + G+ +AVK+L + + LR+ + E ++ +QH N+V+
Sbjct: 15 QQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVK 74
Query: 150 LLGCCIDKDEK--ILIYEYMPNKSLDFFLFDPTKRM----LLDWSAN------------Y 191
G C + LI EY+P SL +L +R+ LL +++ Y
Sbjct: 75 YKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYLGTKRY 134
Query: 192 SSR-LKVSNILLDKDINPKISDFGMARICGGNELQANTSRIVGTYG-----YMSPEYAIQ 245
R L NIL++ + KI DFG+ ++ Q V G + +PE +
Sbjct: 135 IHRDLATRNILVENENRVKIGDFGLTKVLP----QDKEXXKVKEPGESPIFWYAPESLTE 190
Query: 246 GIFSIKSDVFSFGVLLLEIVS 266
FS+ SDV+SFGV+L E+ +
Sbjct: 191 SKFSVASDVWSFGVVLYELFT 211
>pdb|3TJC|A Chain A, Co-Crystal Structure Of Jak2 With Thienopyridine 8
pdb|3TJC|B Chain B, Co-Crystal Structure Of Jak2 With Thienopyridine 8
pdb|3TJD|A Chain A, Co-Crystal Structure Of Jak2 With Thienopyridine 19
pdb|3TJD|B Chain B, Co-Crystal Structure Of Jak2 With Thienopyridine 19
Length = 298
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 59/201 (29%), Positives = 96/201 (47%), Gaps = 33/201 (16%)
Query: 95 NKLGEGGFGPV----YKGVLKK-GDEIAVKRLPGRSGQGLREMKNEASVIAKVQHKNLVR 149
+LG+G FG V Y + G+ +AVK+L + + LR+ + E ++ +QH N+V+
Sbjct: 19 QQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVK 78
Query: 150 LLGCCIDKDEK--ILIYEYMPNKSLDFFLFDPTKRM----LLDWSAN------------Y 191
G C + LI EY+P SL +L +R+ LL +++ Y
Sbjct: 79 YKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYLGTKRY 138
Query: 192 SSR-LKVSNILLDKDINPKISDFGMARICGGNELQANTSRIVGTYG-----YMSPEYAIQ 245
R L NIL++ + KI DFG+ ++ Q V G + +PE +
Sbjct: 139 IHRDLATRNILVENENRVKIGDFGLTKVLP----QDKEXXKVKEPGESPIFWYAPESLTE 194
Query: 246 GIFSIKSDVFSFGVLLLEIVS 266
FS+ SDV+SFGV+L E+ +
Sbjct: 195 SKFSVASDVWSFGVVLYELFT 215
>pdb|3D7T|A Chain A, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 269
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 59/191 (30%), Positives = 99/191 (51%), Gaps = 31/191 (16%)
Query: 97 LGEGGFGPVYKGVLKKGDEIAVKRLPGRSGQGLREMKNEASVIAKVQHKNLVRLLGCCID 156
+G+G FG V G + G+++AVK + ++ + EASV+ +++H NLV+LLG ++
Sbjct: 20 IGKGEFGDVMLGDYR-GNKVAVKCI--KNDATAQAFLAEASVMTQLRHSNLVQLLGVIVE 76
Query: 157 KDEKI-LIYEYMPNKSL-DF----------------FLFDPTKRMLLDWSANYSSR-LKV 197
+ + ++ EYM SL D+ F D + M N+ R L
Sbjct: 77 EKGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLEGNNFVHRDLAA 136
Query: 198 SNILLDKDINPKISDFGMARICGGNELQANTSRIVGT--YGYMSPEYAIQGIFSIKSDVF 255
N+L+ +D K+SDFG+ + +A++++ G + +PE + FS KSDV+
Sbjct: 137 RNVLVSEDNVAKVSDFGLTK-------EASSTQDTGKLPVKWTAPEALREAAFSTKSDVW 189
Query: 256 SFGVLLLEIVS 266
SFG+LL EI S
Sbjct: 190 SFGILLWEIYS 200
>pdb|4HGE|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 8
pdb|4HGE|B Chain B, Jak2 Kinase (Jh1 Domain) In Complex With Compound 8
Length = 300
Score = 69.7 bits (169), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 59/201 (29%), Positives = 96/201 (47%), Gaps = 33/201 (16%)
Query: 95 NKLGEGGFGPV----YKGVLKK-GDEIAVKRLPGRSGQGLREMKNEASVIAKVQHKNLVR 149
+LG+G FG V Y + G+ +AVK+L + + LR+ + E ++ +QH N+V+
Sbjct: 21 QQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVK 80
Query: 150 LLGCCIDKDEK--ILIYEYMPNKSLDFFLFDPTKRM----LLDWSAN------------Y 191
G C + LI EY+P SL +L +R+ LL +++ Y
Sbjct: 81 YKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYLGTKRY 140
Query: 192 SSR-LKVSNILLDKDINPKISDFGMARICGGNELQANTSRIVGTYG-----YMSPEYAIQ 245
R L NIL++ + KI DFG+ ++ Q V G + +PE +
Sbjct: 141 IHRDLATRNILVENENRVKIGDFGLTKVLP----QDKEXXKVKEPGESPIFWYAPESLTE 196
Query: 246 GIFSIKSDVFSFGVLLLEIVS 266
FS+ SDV+SFGV+L E+ +
Sbjct: 197 SKFSVASDVWSFGVVLYELFT 217
>pdb|4DCE|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With A Piperidine-Carboxamide Inhibitor
pdb|4DCE|B Chain B, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With A Piperidine-Carboxamide Inhibitor
pdb|4FOD|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 36
Length = 333
Score = 69.7 bits (169), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 69/245 (28%), Positives = 105/245 (42%), Gaps = 49/245 (20%)
Query: 67 RSKKKEVDQLPLFSFSSVSTATNKFSDANK--------LGEGGFGPVYKGVLKKGD---- 114
R+ D P +SF+ +++ + + + LG G FG VY+G +
Sbjct: 7 RTSTIMTDYNPNYSFAGKTSSISDLKEVPRKNITLIRGLGHGAFGEVYEGQVSGMPNDPS 66
Query: 115 --EIAVKRLPGR-SGQGLREMKNEASVIAKVQHKNLVRLLGCCIDKDEKILIYEYMPNKS 171
++AVK LP S Q + EA +I+K H+N+VR +G + + ++ E M
Sbjct: 67 PLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVRCIGVSLQSLPRFILLELMAGGD 126
Query: 172 LDFFLFDPTKRMLLDWSANYSSRLKVS------------NILLDKDIN------------ 207
L FL + R S L V+ N + +DI
Sbjct: 127 LKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEENHFIHRDIAARNCLLTCPGPG 186
Query: 208 --PKISDFGMARICGGNELQANTSRIVGT----YGYMSPEYAIQGIFSIKSDVFSFGVLL 261
KI DFGMAR + +A+ R G +M PE ++GIF+ K+D +SFGVLL
Sbjct: 187 RVAKIGDFGMAR----DIYRASYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLL 242
Query: 262 LEIVS 266
EI S
Sbjct: 243 WEIFS 247
>pdb|3Q32|A Chain A, Structure Of Janus Kinase 2 With A Pyrrolotriazine
Inhibitor
pdb|3Q32|B Chain B, Structure Of Janus Kinase 2 With A Pyrrolotriazine
Inhibitor
Length = 301
Score = 69.7 bits (169), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 59/201 (29%), Positives = 96/201 (47%), Gaps = 33/201 (16%)
Query: 95 NKLGEGGFGPV----YKGVLKK-GDEIAVKRLPGRSGQGLREMKNEASVIAKVQHKNLVR 149
+LG+G FG V Y + G+ +AVK+L + + LR+ + E ++ +QH N+V+
Sbjct: 16 QQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVK 75
Query: 150 LLGCCIDKDEK--ILIYEYMPNKSLDFFLFDPTKRM----LLDWSAN------------Y 191
G C + LI EY+P SL +L +R+ LL +++ Y
Sbjct: 76 YKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYLGTKRY 135
Query: 192 SSR-LKVSNILLDKDINPKISDFGMARICGGNELQANTSRIVGTYG-----YMSPEYAIQ 245
R L NIL++ + KI DFG+ ++ Q V G + +PE +
Sbjct: 136 IHRDLATRNILVENENRVKIGDFGLTKVLP----QDKEXXKVKEPGESPIFWYAPESLTE 191
Query: 246 GIFSIKSDVFSFGVLLLEIVS 266
FS+ SDV+SFGV+L E+ +
Sbjct: 192 SKFSVASDVWSFGVVLYELFT 212
>pdb|2EB2|A Chain A, Crystal Structure Of Mutated Egfr Kinase Domain (G719s)
Length = 334
Score = 69.7 bits (169), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 56/201 (27%), Positives = 101/201 (50%), Gaps = 24/201 (11%)
Query: 89 NKFSDANKLGEGGFGPVYKGV-LKKGDEI----AVKRL-PGRSGQGLREMKNEASVIAKV 142
+F L G FG VYKG+ + +G+++ A+K L S + +E+ +EA V+A V
Sbjct: 22 TEFKKIKVLSSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASV 81
Query: 143 QHKNLVRLLGCCIDKDEKILIYEYMPNKSLDFFLFDPT----KRMLLDWSA------NY- 191
+ ++ RLLG C+ + LI + MP L ++ + + LL+W NY
Sbjct: 82 DNPHVCRLLGICLTSTVQ-LITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYL 140
Query: 192 ------SSRLKVSNILLDKDINPKISDFGMARICGGNELQANTSRIVGTYGYMSPEYAIQ 245
L N+L+ + KI+DFG+A++ G E + + +M+ E +
Sbjct: 141 EDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILH 200
Query: 246 GIFSIKSDVFSFGVLLLEIVS 266
I++ +SDV+S+GV + E+++
Sbjct: 201 RIYTHQSDVWSYGVTVWELMT 221
>pdb|2B7A|A Chain A, The Structural Basis Of Janus Kinase 2 Inhibition By A
Potent And Specific Pan-Janus Kinase Inhibitor
pdb|2B7A|B Chain B, The Structural Basis Of Janus Kinase 2 Inhibition By A
Potent And Specific Pan-Janus Kinase Inhibitor
pdb|3FUP|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
pdb|3FUP|B Chain B, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
Length = 293
Score = 69.7 bits (169), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 59/201 (29%), Positives = 96/201 (47%), Gaps = 33/201 (16%)
Query: 95 NKLGEGGFGPV----YKGVLKK-GDEIAVKRLPGRSGQGLREMKNEASVIAKVQHKNLVR 149
+LG+G FG V Y + G+ +AVK+L + + LR+ + E ++ +QH N+V+
Sbjct: 14 QQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVK 73
Query: 150 LLGCCIDKDEK--ILIYEYMPNKSLDFFLFDPTKRM----LLDWSAN------------Y 191
G C + LI EY+P SL +L +R+ LL +++ Y
Sbjct: 74 YKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYLGTKRY 133
Query: 192 SSR-LKVSNILLDKDINPKISDFGMARICGGNELQANTSRIVGTYG-----YMSPEYAIQ 245
R L NIL++ + KI DFG+ ++ Q V G + +PE +
Sbjct: 134 IHRDLATRNILVENENRVKIGDFGLTKVLP----QDKEXXKVKEPGESPIFWYAPESLTE 189
Query: 246 GIFSIKSDVFSFGVLLLEIVS 266
FS+ SDV+SFGV+L E+ +
Sbjct: 190 SKFSVASDVWSFGVVLYELFT 210
>pdb|4E4M|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|B Chain B, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|D Chain D, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|E Chain E, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4F08|A Chain A, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
pdb|4F08|B Chain B, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
pdb|4F09|A Chain A, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
Length = 302
Score = 69.7 bits (169), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 59/201 (29%), Positives = 96/201 (47%), Gaps = 33/201 (16%)
Query: 95 NKLGEGGFGPV----YKGVLKK-GDEIAVKRLPGRSGQGLREMKNEASVIAKVQHKNLVR 149
+LG+G FG V Y + G+ +AVK+L + + LR+ + E ++ +QH N+V+
Sbjct: 23 QQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVK 82
Query: 150 LLGCCIDKDEK--ILIYEYMPNKSLDFFLFDPTKRM----LLDWSAN------------Y 191
G C + LI EY+P SL +L +R+ LL +++ Y
Sbjct: 83 YKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYLGTKRY 142
Query: 192 SSR-LKVSNILLDKDINPKISDFGMARICGGNELQANTSRIVGTYG-----YMSPEYAIQ 245
R L NIL++ + KI DFG+ ++ Q V G + +PE +
Sbjct: 143 IHRDLATRNILVENENRVKIGDFGLTKVLP----QDKEXXKVKEPGESPIFWYAPESLTE 198
Query: 246 GIFSIKSDVFSFGVLLLEIVS 266
FS+ SDV+SFGV+L E+ +
Sbjct: 199 SKFSVASDVWSFGVVLYELFT 219
>pdb|4AQC|A Chain A, Triazolopyridine-Based Inhibitor Of Janus Kinase 2
pdb|4AQC|B Chain B, Triazolopyridine-Based Inhibitor Of Janus Kinase 2
Length = 301
Score = 69.7 bits (169), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 59/201 (29%), Positives = 96/201 (47%), Gaps = 33/201 (16%)
Query: 95 NKLGEGGFGPV----YKGVLKK-GDEIAVKRLPGRSGQGLREMKNEASVIAKVQHKNLVR 149
+LG+G FG V Y + G+ +AVK+L + + LR+ + E ++ +QH N+V+
Sbjct: 22 QQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVK 81
Query: 150 LLGCCIDKDEK--ILIYEYMPNKSLDFFLFDPTKRM----LLDWSAN------------Y 191
G C + LI EY+P SL +L +R+ LL +++ Y
Sbjct: 82 YKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYLGTKRY 141
Query: 192 SSR-LKVSNILLDKDINPKISDFGMARICGGNELQANTSRIVGTYG-----YMSPEYAIQ 245
R L NIL++ + KI DFG+ ++ Q V G + +PE +
Sbjct: 142 IHRDLATRNILVENENRVKIGDFGLTKVLP----QDKEXXKVKEPGESPIFWYAPESLTE 197
Query: 246 GIFSIKSDVFSFGVLLLEIVS 266
FS+ SDV+SFGV+L E+ +
Sbjct: 198 SKFSVASDVWSFGVVLYELFT 218
>pdb|3RVG|A Chain A, Crystals Structure Of Jak2 With A
1-Amino-5h-Pyrido[4,3-B]indol-4- Carboxamide Inhibitor
Length = 303
Score = 69.7 bits (169), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 59/201 (29%), Positives = 96/201 (47%), Gaps = 33/201 (16%)
Query: 95 NKLGEGGFGPV----YKGVLKK-GDEIAVKRLPGRSGQGLREMKNEASVIAKVQHKNLVR 149
+LG+G FG V Y + G+ +AVK+L + + LR+ + E ++ +QH N+V+
Sbjct: 20 QQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVK 79
Query: 150 LLGCCIDKDEK--ILIYEYMPNKSLDFFLFDPTKRM----LLDWSAN------------Y 191
G C + LI EY+P SL +L +R+ LL +++ Y
Sbjct: 80 YKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYLGTKRY 139
Query: 192 SSR-LKVSNILLDKDINPKISDFGMARICGGNELQANTSRIVGTYG-----YMSPEYAIQ 245
R L NIL++ + KI DFG+ ++ Q V G + +PE +
Sbjct: 140 IHRDLATRNILVENENRVKIGDFGLTKVLP----QDKEXXKVKEPGESPIFWYAPESLTE 195
Query: 246 GIFSIKSDVFSFGVLLLEIVS 266
FS+ SDV+SFGV+L E+ +
Sbjct: 196 SKFSVASDVWSFGVVLYELFT 216
>pdb|3PPZ|A Chain A, Crystal Structure Of Ctr1 Kinase Domain In Complex With
Staurosporine
pdb|3PPZ|B Chain B, Crystal Structure Of Ctr1 Kinase Domain In Complex With
Staurosporine
Length = 309
Score = 69.7 bits (169), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 55/200 (27%), Positives = 93/200 (46%), Gaps = 26/200 (13%)
Query: 96 KLGEGGFGPVYKGVLKKGDEIAVKRLPGRSGQGLR--EMKNEASVIAKVQHKNLVRLLGC 153
K+G G FG V++ G ++AVK L + R E E +++ +++H N+V +G
Sbjct: 44 KIGAGSFGTVHRAEWH-GSDVAVKILMEQDFHAERVNEFLREVAIMKRLRHPNIVLFMGA 102
Query: 154 CIDKDEKILIYEYMPNKSLDFFL--------FDPTKRMLLDWSA----NY---------S 192
++ EY+ SL L D +R+ + + NY
Sbjct: 103 VTQPPNLSIVTEYLSRGSLYRLLHKSGAREQLDERRRLSMAYDVAKGMNYLHNRNPPIVH 162
Query: 193 SRLKVSNILLDKDINPKISDFGMARICGGNELQANTSRIVGTYGYMSPEYAIQGIFSIKS 252
LK N+L+DK K+ DFG++R+ L + + GT +M+PE + KS
Sbjct: 163 RDLKSPNLLVDKKYTVKVCDFGLSRLKASXFLXSKXA--AGTPEWMAPEVLRDEPSNEKS 220
Query: 253 DVFSFGVLLLEIVSGKKTTG 272
DV+SFGV+L E+ + ++ G
Sbjct: 221 DVYSFGVILWELATLQQPWG 240
>pdb|3LPB|A Chain A, Crystal Structure Of Jak2 Complexed With A Potent
2,8-Diaryl Quinoxaline Inhibitor
pdb|3LPB|B Chain B, Crystal Structure Of Jak2 Complexed With A Potent
2,8-Diaryl Quinoxaline Inhibitor
pdb|3KRR|A Chain A, Crystal Structure Of Jak2 Complexed With A Potent
Quinoxaline Atp Site Inhibitor
Length = 295
Score = 69.7 bits (169), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 59/201 (29%), Positives = 96/201 (47%), Gaps = 33/201 (16%)
Query: 95 NKLGEGGFGPV----YKGVLKK-GDEIAVKRLPGRSGQGLREMKNEASVIAKVQHKNLVR 149
+LG+G FG V Y + G+ +AVK+L + + LR+ + E ++ +QH N+V+
Sbjct: 16 QQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVK 75
Query: 150 LLGCCIDKDEK--ILIYEYMPNKSLDFFLFDPTKRM----LLDWSAN------------Y 191
G C + LI EY+P SL +L +R+ LL +++ Y
Sbjct: 76 YKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYLGTKRY 135
Query: 192 SSR-LKVSNILLDKDINPKISDFGMARICGGNELQANTSRIVGTYG-----YMSPEYAIQ 245
R L NIL++ + KI DFG+ ++ Q V G + +PE +
Sbjct: 136 IHRDLATRNILVENENRVKIGDFGLTKVLP----QDKEXXKVKEPGESPIFWYAPESLTE 191
Query: 246 GIFSIKSDVFSFGVLLLEIVS 266
FS+ SDV+SFGV+L E+ +
Sbjct: 192 SKFSVASDVWSFGVVLYELFT 212
>pdb|4E1Z|A Chain A, Structure Of Mouse Tyk-2 Complexed To A 3-Aminoindazole
Inhibitor
Length = 291
Score = 69.7 bits (169), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 68/230 (29%), Positives = 101/230 (43%), Gaps = 30/230 (13%)
Query: 97 LGEGGFG--------PVYKGVLKKGDEIAVKRLPGRSGQGLRE-MKNEASVIAKVQHKNL 147
LGEG FG P G G+ +AVK L G LR + E ++ + H+++
Sbjct: 17 LGEGHFGKVSLYCYDPTNDGT---GEMVAVKALKEGCGPQLRSGWQREIEILRTLYHEHI 73
Query: 148 VRLLGCCIDKDEK--ILIYEYMPNKSLD--------------FFLFDPTKRMLLDWSANY 191
V+ GCC D+ EK L+ EY+P SL F + M + +Y
Sbjct: 74 VKYKGCCEDQGEKSVQLVMEYVPLGSLRDYLPRHCVGLAQLLLFAQQICEGMAYLHAQHY 133
Query: 192 SSR-LKVSNILLDKDINPKISDFGMAR-ICGGNELQANTSRIVGTYGYMSPEYAIQGIFS 249
R L N+LLD D KI DFG+A+ + G+E + +PE + F
Sbjct: 134 IHRALAARNVLLDNDRLVKIGDFGLAKAVPEGHEYYRVREDGDSPVFWYAPECLKECKFY 193
Query: 250 IKSDVFSFGVLLLEIVSGKKTTGFYRTDSLTLLGYAWDLWTSNRTLELID 299
SDV+SFGV L E+++ + T L+G+ T R EL++
Sbjct: 194 YASDVWSFGVTLYELLTYCDSNQSPHTKFTELIGHTQGQMTVLRLTELLE 243
>pdb|4FNZ|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Piperidine-Carboxamide Inhibitor 2
Length = 327
Score = 69.7 bits (169), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 69/245 (28%), Positives = 105/245 (42%), Gaps = 49/245 (20%)
Query: 67 RSKKKEVDQLPLFSFSSVSTATNKFSDANK--------LGEGGFGPVYKGVLKKGD---- 114
R+ D P +SF+ +++ + + + LG G FG VY+G +
Sbjct: 1 RTSTIMTDYNPNYSFAGKTSSISDLKEVPRKNITLIRGLGHGAFGEVYEGQVSGMPNDPS 60
Query: 115 --EIAVKRLPGR-SGQGLREMKNEASVIAKVQHKNLVRLLGCCIDKDEKILIYEYMPNKS 171
++AVK LP S Q + EA +I+K H+N+VR +G + + ++ E M
Sbjct: 61 PLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVRCIGVSLQSLPRFILLELMAGGD 120
Query: 172 LDFFLFDPTKRMLLDWSANYSSRLKVS------------NILLDKDIN------------ 207
L FL + R S L V+ N + +DI
Sbjct: 121 LKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEENHFIHRDIAARNCLLTCPGPG 180
Query: 208 --PKISDFGMARICGGNELQANTSRIVGT----YGYMSPEYAIQGIFSIKSDVFSFGVLL 261
KI DFGMAR + +A+ R G +M PE ++GIF+ K+D +SFGVLL
Sbjct: 181 RVAKIGDFGMAR----DIYRASYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLL 236
Query: 262 LEIVS 266
EI S
Sbjct: 237 WEIFS 241
>pdb|4E20|A Chain A, Structure Of Mouse Tyk-2 Complexed To A 3-Aminoindazole
Inhibitor
Length = 290
Score = 69.3 bits (168), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 68/230 (29%), Positives = 101/230 (43%), Gaps = 30/230 (13%)
Query: 97 LGEGGFG--------PVYKGVLKKGDEIAVKRLPGRSGQGLRE-MKNEASVIAKVQHKNL 147
LGEG FG P G G+ +AVK L G LR + E ++ + H+++
Sbjct: 16 LGEGHFGKVSLYCYDPTNDGT---GEMVAVKALKEGCGPQLRSGWQREIEILRTLYHEHI 72
Query: 148 VRLLGCCIDKDEK--ILIYEYMPNKSLD--------------FFLFDPTKRMLLDWSANY 191
V+ GCC D+ EK L+ EY+P SL F + M + +Y
Sbjct: 73 VKYKGCCEDQGEKSVQLVMEYVPLGSLRDYLPRHCVGLAQLLLFAQQICEGMAYLHAQHY 132
Query: 192 SSR-LKVSNILLDKDINPKISDFGMAR-ICGGNELQANTSRIVGTYGYMSPEYAIQGIFS 249
R L N+LLD D KI DFG+A+ + G+E + +PE + F
Sbjct: 133 IHRALAARNVLLDNDRLVKIGDFGLAKAVPEGHEYYRVREDGDSPVFWYAPECLKECKFY 192
Query: 250 IKSDVFSFGVLLLEIVSGKKTTGFYRTDSLTLLGYAWDLWTSNRTLELID 299
SDV+SFGV L E+++ + T L+G+ T R EL++
Sbjct: 193 YASDVWSFGVTLYELLTYCDSNQSPHTKFTELIGHTQGQMTVLRLTELLE 242
>pdb|3JY9|A Chain A, Janus Kinase 2 Inhibitors
Length = 311
Score = 69.3 bits (168), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 59/201 (29%), Positives = 96/201 (47%), Gaps = 33/201 (16%)
Query: 95 NKLGEGGFGPV----YKGVLKK-GDEIAVKRLPGRSGQGLREMKNEASVIAKVQHKNLVR 149
+LG+G FG V Y + G+ +AVK+L + + LR+ + E ++ +QH N+V+
Sbjct: 34 QQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVK 93
Query: 150 LLGCCIDKDEK--ILIYEYMPNKSLDFFLFDPTKRM----LLDWSAN------------Y 191
G C + LI EY+P SL +L +R+ LL +++ Y
Sbjct: 94 YKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYLGTKRY 153
Query: 192 SSR-LKVSNILLDKDINPKISDFGMARICGGNELQANTSRIVGTYG-----YMSPEYAIQ 245
R L NIL++ + KI DFG+ ++ Q V G + +PE +
Sbjct: 154 IHRDLATRNILVENENRVKIGDFGLTKVLP----QDKEXXKVKEPGESPIFWYAPESLTE 209
Query: 246 GIFSIKSDVFSFGVLLLEIVS 266
FS+ SDV+SFGV+L E+ +
Sbjct: 210 SKFSVASDVWSFGVVLYELFT 230
>pdb|4BBE|A Chain A, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|B Chain B, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|C Chain C, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|D Chain D, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|A Chain A, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|B Chain B, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|C Chain C, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|D Chain D, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
Length = 298
Score = 69.3 bits (168), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 58/201 (28%), Positives = 98/201 (48%), Gaps = 33/201 (16%)
Query: 95 NKLGEGGFGPV----YKGVLKK-GDEIAVKRLPGRSGQGLREMKNEASVIAKVQHKNLVR 149
+LG+G FG V Y + G+ +AVK+L + + LR+ + E ++ +QH N+V+
Sbjct: 17 QQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVK 76
Query: 150 LLGCCIDKDEK--ILIYEYMPNKSLDFFLFDPTKRM----LLDWSAN------------Y 191
G C + LI EY+P SL +L +R+ LL +++ Y
Sbjct: 77 YKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYLGTKRY 136
Query: 192 SSR-LKVSNILLDKDINPKISDFGMARICGGNE-----LQANTSRIVGTYGYMSPEYAIQ 245
R L NIL++ + KI DFG+ ++ ++ + S I + +PE +
Sbjct: 137 IHRNLATRNILVENENRVKIGDFGLTKVLPQDKEYYKVKEPGESPIF----WYAPESLTE 192
Query: 246 GIFSIKSDVFSFGVLLLEIVS 266
FS+ SDV+SFGV+L E+ +
Sbjct: 193 SKFSVASDVWSFGVVLYELFT 213
>pdb|2ZM3|A Chain A, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|B Chain B, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|C Chain C, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|D Chain D, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|3F5P|A Chain A, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|B Chain B, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|C Chain C, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|D Chain D, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|E Chain E, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|F Chain F, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|G Chain G, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|H Chain H, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|I Chain I, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|J Chain J, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|K Chain K, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|M Chain M, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|L Chain L, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|R Chain R, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|S Chain S, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|T Chain T, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
Length = 308
Score = 69.3 bits (168), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 77/307 (25%), Positives = 125/307 (40%), Gaps = 54/307 (17%)
Query: 86 TATNKFSDANKLGEGGFGPVYKGVLKK--GDE----IAVKRLPGRSGQGLR-EMKNEASV 138
A K + + +LG+G FG VY+GV K DE +A+K + + R E NEASV
Sbjct: 16 VAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASV 75
Query: 139 IAKVQHKNLVRLLGCCIDKDEKILIYEYMPNKSLDFFLFDPTKRM--------------- 183
+ + ++VRLLG ++I E M L +L M
Sbjct: 76 MKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMI 135
Query: 184 -----------LLDWSANYSSRLKVSNILLDKDINPKISDFGMARICGGNELQANTSRIV 232
L+ + L N ++ +D KI DFGM R + + +
Sbjct: 136 QMAGEIADGMAYLNANKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIXETDXXRKGGKGL 195
Query: 233 GTYGYMSPEYAIQGIFSIKSDVFSFGVLLLEIVSGKKTTGFYRTDSLTLLGYAWDLWTSN 292
+MSPE G+F+ SDV+SFGV+L EI TL + ++
Sbjct: 196 LPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIA--------------TLAEQPYQGLSNE 241
Query: 293 RTLELI--DPILEDEYSSKHMLLRYVNIALLCVQESADDRPTMNEVVSMLTDEAAALFPP 350
+ L + +L+ + ML + +C Q + RP+ E++S + +E F
Sbjct: 242 QVLRFVMEGGLLDKPDNCPDMLFELMR---MCWQYNPKMRPSFLEIISSIKEEMEPGF-- 296
Query: 351 KQPAFSY 357
++ +F Y
Sbjct: 297 REVSFYY 303
>pdb|1IRK|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Human Insulin Receptor
Length = 306
Score = 69.3 bits (168), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 74/287 (25%), Positives = 121/287 (42%), Gaps = 48/287 (16%)
Query: 96 KLGEGGFGPVYKGVLK---KGD---EIAVKRLPGRSGQGLR-EMKNEASVIAKVQHKNLV 148
+LG+G FG VY+G + KG+ +AVK + + R E NEASV+ ++V
Sbjct: 24 ELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVV 83
Query: 149 RLLGCCIDKDEKILIYEYMPNKSLDFFLFD-------------PTKRMLLDWSANYSS-- 193
RLLG +++ E M + L +L PT + ++ +A +
Sbjct: 84 RLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGM 143
Query: 194 -----------RLKVSNILLDKDINPKISDFGMARICGGNELQANTSRIVGTYGYMSPEY 242
L N ++ D KI DFGM R + + + +M+PE
Sbjct: 144 AYLNAKKFVHRDLAARNCMVAHDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMAPES 203
Query: 243 AIQGIFSIKSDVFSFGVLLLEIVSGKKTTGFYRTDSLTLLGYAWDLWTSNRTLELIDPIL 302
G+F+ SD++SFGV+L EI S + + + +L + D L+ D
Sbjct: 204 LKDGVFTTSSDMWSFGVVLWEITSLAEQP-YQGLSNEQVLKFVMD----GGYLDQPDNCP 258
Query: 303 EDEYSSKHMLLRYVNIALLCVQESADDRPTMNEVVSMLTDEAAALFP 349
E R ++ +C Q + RPT E+V++L D+ FP
Sbjct: 259 E----------RVTDLMRMCWQFNPKMRPTFLEIVNLLKDDLHPSFP 295
>pdb|3IO7|A Chain A, 2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Selective
Inhibitors Of Jak2
pdb|3IOK|A Chain A, 2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Selective
Inhibitors Of Jak2
pdb|3KCK|A Chain A, A Novel Chemotype Of Kinase Inhibitors
Length = 313
Score = 69.3 bits (168), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 59/201 (29%), Positives = 96/201 (47%), Gaps = 33/201 (16%)
Query: 95 NKLGEGGFGPV----YKGVLKK-GDEIAVKRLPGRSGQGLREMKNEASVIAKVQHKNLVR 149
+LG+G FG V Y + G+ +AVK+L + + LR+ + E ++ +QH N+V+
Sbjct: 34 QQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVK 93
Query: 150 LLGCCIDKDEK--ILIYEYMPNKSLDFFLFDPTKRM----LLDWSAN------------Y 191
G C + LI EY+P SL +L +R+ LL +++ Y
Sbjct: 94 YKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYLGTKRY 153
Query: 192 SSR-LKVSNILLDKDINPKISDFGMARICGGNELQANTSRIVGTYG-----YMSPEYAIQ 245
R L NIL++ + KI DFG+ ++ Q V G + +PE +
Sbjct: 154 IHRDLATRNILVENENRVKIGDFGLTKVLP----QDKEXXKVKEPGESPIFWYAPESLTE 209
Query: 246 GIFSIKSDVFSFGVLLLEIVS 266
FS+ SDV+SFGV+L E+ +
Sbjct: 210 SKFSVASDVWSFGVVLYELFT 230
>pdb|3ETA|A Chain A, Kinase Domain Of Insulin Receptor Complexed With A Pyrrolo
Pyridine Inhibitor
pdb|3ETA|B Chain B, Kinase Domain Of Insulin Receptor Complexed With A Pyrrolo
Pyridine Inhibitor
Length = 317
Score = 69.3 bits (168), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 74/287 (25%), Positives = 121/287 (42%), Gaps = 48/287 (16%)
Query: 96 KLGEGGFGPVYKGVLK---KGD---EIAVKRLPGRSGQGLR-EMKNEASVIAKVQHKNLV 148
+LG+G FG VY+G + KG+ +AVK + + R E NEASV+ ++V
Sbjct: 23 ELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVV 82
Query: 149 RLLGCCIDKDEKILIYEYMPNKSLDFFLFD-------------PTKRMLLDWSANYSS-- 193
RLLG +++ E M + L +L PT + ++ +A +
Sbjct: 83 RLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGM 142
Query: 194 -----------RLKVSNILLDKDINPKISDFGMARICGGNELQANTSRIVGTYGYMSPEY 242
L N ++ D KI DFGM R + + + +M+PE
Sbjct: 143 AYLNAKKFVHRDLAARNCMVAHDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMAPES 202
Query: 243 AIQGIFSIKSDVFSFGVLLLEIVSGKKTTGFYRTDSLTLLGYAWDLWTSNRTLELIDPIL 302
G+F+ SD++SFGV+L EI S + + + +L + D L+ D
Sbjct: 203 LKDGVFTTSSDMWSFGVVLWEITSLAEQP-YQGLSNEQVLKFVMD----GGYLDQPDNCP 257
Query: 303 EDEYSSKHMLLRYVNIALLCVQESADDRPTMNEVVSMLTDEAAALFP 349
E R ++ +C Q + RPT E+V++L D+ FP
Sbjct: 258 E----------RVTDLMRMCWQFNPKMRPTFLEIVNLLKDDLHPSFP 294
>pdb|3UGC|A Chain A, Structural Basis Of Jak2 Inhibition By The Type Ii
Inhibtor Nvp-Bbt594
Length = 295
Score = 69.3 bits (168), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 58/201 (28%), Positives = 98/201 (48%), Gaps = 33/201 (16%)
Query: 95 NKLGEGGFGPV----YKGVLKK-GDEIAVKRLPGRSGQGLREMKNEASVIAKVQHKNLVR 149
+LG+G FG V Y + G+ +AVK+L + + LR+ + E ++ +QH N+V+
Sbjct: 16 QQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVK 75
Query: 150 LLGCCIDKDEK--ILIYEYMPNKSLDFFLFDPTKRM----LLDWSAN------------Y 191
G C + LI EY+P SL +L +R+ LL +++ Y
Sbjct: 76 YKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYLGTKRY 135
Query: 192 SSR-LKVSNILLDKDINPKISDFGMARICGGNE-----LQANTSRIVGTYGYMSPEYAIQ 245
R L NIL++ + KI DFG+ ++ ++ + S I + +PE +
Sbjct: 136 IHRDLATRNILVENENRVKIGDFGLTKVLPQDKEFFKVKEPGESPIF----WYAPESLTE 191
Query: 246 GIFSIKSDVFSFGVLLLEIVS 266
FS+ SDV+SFGV+L E+ +
Sbjct: 192 SKFSVASDVWSFGVVLYELFT 212
>pdb|3Q96|A Chain A, B-Raf Kinase Domain In Complex With A
Tetrahydronaphthalene Inhibitor
pdb|3Q96|B Chain B, B-Raf Kinase Domain In Complex With A
Tetrahydronaphthalene Inhibitor
Length = 282
Score = 69.3 bits (168), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 57/201 (28%), Positives = 99/201 (49%), Gaps = 33/201 (16%)
Query: 94 ANKLGEGGFGPVYKGVLKKGDEIAVKRL--PGRSGQGLREMKNEASVIAKVQHKNLVRLL 151
++G G FG VYKG K ++AVK L + Q L+ KNE V+ K +H N++ +
Sbjct: 15 GQRIGSGSFGTVYKG--KWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFM 72
Query: 152 GCCIDKDEKILIYEYMPNKSLDFFL------FDPTKRM-----------LLDWSANYSSR 194
G K + ++ ++ SL L F+ K + L +
Sbjct: 73 GYS-TKPQLAIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGMDYLHAKSIIHRD 131
Query: 195 LKVSNILLDKDINPKISDFGMA----RICGGNELQANTSRIVGTYGYMSPE---YAIQGI 247
LK +NI L +D+ KI DFG+A R G ++ + ++ G+ +M+PE +
Sbjct: 132 LKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFE----QLSGSILWMAPEVIRMQDKNP 187
Query: 248 FSIKSDVFSFGVLLLEIVSGK 268
+S +SDV++FG++L E+++G+
Sbjct: 188 YSFQSDVYAFGIVLYELMTGQ 208
>pdb|2FB8|A Chain A, Structure Of The B-Raf Kinase Domain Bound To Sb-590885
pdb|2FB8|B Chain B, Structure Of The B-Raf Kinase Domain Bound To Sb-590885
Length = 281
Score = 69.3 bits (168), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 57/201 (28%), Positives = 99/201 (49%), Gaps = 33/201 (16%)
Query: 94 ANKLGEGGFGPVYKGVLKKGDEIAVKRL--PGRSGQGLREMKNEASVIAKVQHKNLVRLL 151
++G G FG VYKG K ++AVK L + Q L+ KNE V+ K +H N++ +
Sbjct: 18 GQRIGSGSFGTVYKG--KWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFM 75
Query: 152 GCCIDKDEKILIYEYMPNKSLDFFL------FDPTKRM-----------LLDWSANYSSR 194
G K + ++ ++ SL L F+ K + L +
Sbjct: 76 GYST-KPQLAIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGMDYLHAKSIIHRD 134
Query: 195 LKVSNILLDKDINPKISDFGMA----RICGGNELQANTSRIVGTYGYMSPE---YAIQGI 247
LK +NI L +D+ KI DFG+A R G ++ + ++ G+ +M+PE +
Sbjct: 135 LKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFE----QLSGSILWMAPEVIRMQDKNP 190
Query: 248 FSIKSDVFSFGVLLLEIVSGK 268
+S +SDV++FG++L E+++G+
Sbjct: 191 YSFQSDVYAFGIVLYELMTGQ 211
>pdb|4H58|A Chain A, Braf In Complex With Compound 3
pdb|4H58|B Chain B, Braf In Complex With Compound 3
pdb|4H58|C Chain C, Braf In Complex With Compound 3
Length = 275
Score = 69.3 bits (168), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 55/197 (27%), Positives = 95/197 (48%), Gaps = 25/197 (12%)
Query: 94 ANKLGEGGFGPVYKGVLKKGDEIAVKRL--PGRSGQGLREMKNEASVIAKVQHKNLVRLL 151
++G G FG VYKG K ++AVK L + Q L+ KNE V+ K +H N++ +
Sbjct: 13 GQRIGSGSFGTVYKG--KWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFM 70
Query: 152 GCCIDKDEKILIYEYMPNKSLDFFL------FDPTKRM-----------LLDWSANYSSR 194
G K + ++ ++ SL L F+ K + L +
Sbjct: 71 GYST-KPQLAIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGMDYLHAKSIIHRD 129
Query: 195 LKVSNILLDKDINPKISDFGMARICGGNELQANTSRIVGTYGYMSPE---YAIQGIFSIK 251
LK +NI L +D+ KI DFG+A + ++ G+ +M+PE + +S +
Sbjct: 130 LKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPYSFQ 189
Query: 252 SDVFSFGVLLLEIVSGK 268
SDV++FG++L E+++G+
Sbjct: 190 SDVYAFGIVLYELMTGQ 206
>pdb|2HEN|A Chain A, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|B Chain B, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|C Chain C, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|D Chain D, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
Length = 286
Score = 69.3 bits (168), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 73/275 (26%), Positives = 124/275 (45%), Gaps = 52/275 (18%)
Query: 97 LGEGGFGPVYKGVLKKGDE----IAVKRL-PGRSGQGLREMKNEASVIAKVQHKNLVRLL 151
+G G FG V G LK + +A+K L G + + R+ +EAS++ + H N++ L
Sbjct: 15 IGAGEFGEVCSGHLKLPGKREIFVAIKTLKSGYTEKQRRDFLSEASIMGQFDHPNVIHLE 74
Query: 152 GCCIDKDEKILIYEYMPNKSLDFFLFDPTKR--------MLLDWSA--------NYSSR- 194
G ++I E+M N SLD FL + ML +A NY R
Sbjct: 75 GVVTKSTPVMIITEFMENGSLDSFLRQNDGQFTVIQLVGMLRGIAAGMKYLADMNYVHRA 134
Query: 195 LKVSNILLDKDINPKISDFGMARICGGNELQANTSRIVG---TYGYMSPEYAIQGIFSIK 251
L NIL++ ++ K+SDFG++R + + +G + +PE F+
Sbjct: 135 LAARNILVNSNLVCKVSDFGLSRFLEDDTSDPTYTSALGGKIPIRWTAPEAIQYRKFTSA 194
Query: 252 SDVFSFGVLLLEIVS-GKKTTGFYRTDSLTLLGYAWDLWTSNRTLELID-----PILEDE 305
SDV+S+G+++ E++S G++ WD+ T+ + I+ P D
Sbjct: 195 SDVWSYGIVMWEVMSYGERPY--------------WDM-TNQDVINAIEQDYRLPPPMDC 239
Query: 306 YSSKHMLLRYVNIALLCVQESADDRPTMNEVVSML 340
S+ H L+ L C Q+ + RP ++V+ L
Sbjct: 240 PSALHQLM------LDCWQKDRNHRPKFGQIVNTL 268
>pdb|4DBN|A Chain A, Crystal Structure Of The Kinase Domain Of Human B-Raf With
A [1, 3]thiazolo[5,4-B]pyridine Derivative
pdb|4DBN|B Chain B, Crystal Structure Of The Kinase Domain Of Human B-Raf With
A [1, 3]thiazolo[5,4-B]pyridine Derivative
Length = 284
Score = 69.3 bits (168), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 57/201 (28%), Positives = 99/201 (49%), Gaps = 33/201 (16%)
Query: 94 ANKLGEGGFGPVYKGVLKKGDEIAVKRL--PGRSGQGLREMKNEASVIAKVQHKNLVRLL 151
++G G FG VYKG K ++AVK L + Q L+ KNE V+ K +H N++ +
Sbjct: 18 GQRIGSGSFGTVYKG--KWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFM 75
Query: 152 GCCIDKDEKILIYEYMPNKSLDFFL------FDPTKRM-----------LLDWSANYSSR 194
G K + ++ ++ SL L F+ K + L +
Sbjct: 76 GYST-KPQLAIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGMDYLHAKSIIHRD 134
Query: 195 LKVSNILLDKDINPKISDFGMA----RICGGNELQANTSRIVGTYGYMSPE---YAIQGI 247
LK +NI L +D+ KI DFG+A R G ++ + ++ G+ +M+PE +
Sbjct: 135 LKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFE----QLSGSILWMAPEVIRMQDKNP 190
Query: 248 FSIKSDVFSFGVLLLEIVSGK 268
+S +SDV++FG++L E+++G+
Sbjct: 191 YSFQSDVYAFGIVLYELMTGQ 211
>pdb|3IDP|A Chain A, B-Raf V600e Kinase Domain In Complex With An
Aminoisoquinoline Inhibitor
pdb|3IDP|B Chain B, B-Raf V600e Kinase Domain In Complex With An
Aminoisoquinoline Inhibitor
Length = 300
Score = 68.9 bits (167), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 58/203 (28%), Positives = 101/203 (49%), Gaps = 37/203 (18%)
Query: 94 ANKLGEGGFGPVYKGVLKKGDEIAVKRL--PGRSGQGLREMKNEASVIAKVQHKNLVRLL 151
++G G FG VYKG K ++AVK L + Q L+ KNE V+ K +H N++ +
Sbjct: 33 GQRIGSGSFGTVYKG--KWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFM 90
Query: 152 GCCIDKDEKILIYEYMPNKSLDFFL------FDPTKRMLLDWSANYSS------------ 193
G K + ++ ++ SL L F+ K L+D + +
Sbjct: 91 GYST-KPQLAIVTQWCEGSSLYHHLHIIETKFEMIK--LIDIARQTAQGMDYLHAKSIIH 147
Query: 194 -RLKVSNILLDKDINPKISDFGMA----RICGGNELQANTSRIVGTYGYMSPE---YAIQ 245
LK +NI L +D+ KI DFG+A R G ++ + ++ G+ +M+PE +
Sbjct: 148 RDLKSNNIFLHEDLTVKIGDFGLATEKSRWSGSHQFE----QLSGSILWMAPEVIRMQDK 203
Query: 246 GIFSIKSDVFSFGVLLLEIVSGK 268
+S +SDV++FG++L E+++G+
Sbjct: 204 NPYSFQSDVYAFGIVLYELMTGQ 226
>pdb|2OO8|X Chain X, Synthesis, Structural Analysis, And Sar Studies Of
Triazine Derivatives As Potent, Selective Tie-2
Inhibitors
pdb|2OSC|A Chain A, Synthesis, Structural Analysis, And Sar Studies Of
Triazine Derivatives As Potent, Selective Tie-2
Inhibitors
pdb|2P4I|A Chain A, Evolution Of A Highly Selective And Potent
2-(Pyridin-2-Yl)- 1,3,5-Triazine Tie-2 Kinase Inhibitor
pdb|2P4I|B Chain B, Evolution Of A Highly Selective And Potent
2-(Pyridin-2-Yl)- 1,3,5-Triazine Tie-2 Kinase Inhibitor
pdb|3L8P|A Chain A, Crystal Structure Of Cytoplasmic Kinase Domain Of Tie2
Complexed With Inhibitor Cep11207
Length = 317
Score = 68.9 bits (167), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 65/214 (30%), Positives = 101/214 (47%), Gaps = 42/214 (19%)
Query: 90 KFSDANKLGEGGFGPVYKGVLKKGD---EIAVKRLPGRSGQG-LREMKNEASVIAKV-QH 144
KF D +GEG FG V K +KK + A+KR+ + + R+ E V+ K+ H
Sbjct: 18 KFQDV--IGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHH 75
Query: 145 KNLVRLLGCCIDKDEKILIYEYMPNKSLDFFL-------FDP------------TKRMLL 185
N++ LLG C + L EY P+ +L FL DP + + LL
Sbjct: 76 PNIINLLGACEHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLL 135
Query: 186 DWSA------NYSSR-------LKVSNILLDKDINPKISDFGMARICGGNELQANTSRIV 232
++A +Y S+ L NIL+ ++ KI+DFG++R G E+ +
Sbjct: 136 HFAADVARGMDYLSQKQFIHRDLAARNILVGENYVAKIADFGLSR---GQEVYVKKTMGR 192
Query: 233 GTYGYMSPEYAIQGIFSIKSDVFSFGVLLLEIVS 266
+M+ E +++ SDV+S+GVLL EIVS
Sbjct: 193 LPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVS 226
>pdb|1UWJ|A Chain A, The Complex Of Mutant V599e B-raf And Bay439006
pdb|1UWJ|B Chain B, The Complex Of Mutant V599e B-raf And Bay439006
Length = 276
Score = 68.9 bits (167), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 57/201 (28%), Positives = 99/201 (49%), Gaps = 33/201 (16%)
Query: 94 ANKLGEGGFGPVYKGVLKKGDEIAVKRL--PGRSGQGLREMKNEASVIAKVQHKNLVRLL 151
++G G FG VYKG K ++AVK L + Q L+ KNE V+ K +H N++ +
Sbjct: 13 GQRIGSGSFGTVYKG--KWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFM 70
Query: 152 GCCIDKDEKILIYEYMPNKSLDFFL------FDPTKRM-----------LLDWSANYSSR 194
G K + ++ ++ SL L F+ K + L +
Sbjct: 71 GYST-KPQLAIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGMDYLHAKSIIHRD 129
Query: 195 LKVSNILLDKDINPKISDFGMA----RICGGNELQANTSRIVGTYGYMSPE---YAIQGI 247
LK +NI L +D+ KI DFG+A R G ++ + ++ G+ +M+PE +
Sbjct: 130 LKSNNIFLHEDLTVKIGDFGLATEKSRWSGSHQFE----QLSGSILWMAPEVIRMQDKNP 185
Query: 248 FSIKSDVFSFGVLLLEIVSGK 268
+S +SDV++FG++L E+++G+
Sbjct: 186 YSFQSDVYAFGIVLYELMTGQ 206
>pdb|1JPA|A Chain A, Crystal Structure Of Unphosphorylated Ephb2 Receptor
Tyrosine Kinase And Juxtamembrane Region
pdb|1JPA|B Chain B, Crystal Structure Of Unphosphorylated Ephb2 Receptor
Tyrosine Kinase And Juxtamembrane Region
Length = 312
Score = 68.9 bits (167), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 73/275 (26%), Positives = 124/275 (45%), Gaps = 52/275 (18%)
Query: 97 LGEGGFGPVYKGVLKKGDE----IAVKRL-PGRSGQGLREMKNEASVIAKVQHKNLVRLL 151
+G G FG V G LK + +A+K L G + + R+ +EAS++ + H N++ L
Sbjct: 41 IGAGEFGEVCSGHLKLPGKREIFVAIKTLKSGYTEKQRRDFLSEASIMGQFDHPNVIHLE 100
Query: 152 GCCIDKDEKILIYEYMPNKSLDFFLFDPTKR--------MLLDWSA--------NYSSR- 194
G ++I E+M N SLD FL + ML +A NY R
Sbjct: 101 GVVTKSTPVMIITEFMENGSLDSFLRQNDGQFTVIQLVGMLRGIAAGMKYLADMNYVHRD 160
Query: 195 LKVSNILLDKDINPKISDFGMARICGGNELQANTSRIVG---TYGYMSPEYAIQGIFSIK 251
L NIL++ ++ K+SDFG++R + + +G + +PE F+
Sbjct: 161 LAARNILVNSNLVCKVSDFGLSRFLEDDTSDPTYTSALGGKIPIRWTAPEAIQYRKFTSA 220
Query: 252 SDVFSFGVLLLEIVS-GKKTTGFYRTDSLTLLGYAWDLWTSNRTLELID-----PILEDE 305
SDV+S+G+++ E++S G++ WD+ T+ + I+ P D
Sbjct: 221 SDVWSYGIVMWEVMSYGERPY--------------WDM-TNQDVINAIEQDYRLPPPMDC 265
Query: 306 YSSKHMLLRYVNIALLCVQESADDRPTMNEVVSML 340
S+ H L+ L C Q+ + RP ++V+ L
Sbjct: 266 PSALHQLM------LDCWQKDRNHRPKFGQIVNTL 294
>pdb|2WQB|A Chain A, Structure Of The Tie2 Kinase Domain In Complex With A
Thiazolopyrimidine Inhibitor
Length = 324
Score = 68.9 bits (167), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 65/214 (30%), Positives = 101/214 (47%), Gaps = 42/214 (19%)
Query: 90 KFSDANKLGEGGFGPVYKGVLKKGD---EIAVKRLPGRSGQG-LREMKNEASVIAKV-QH 144
KF D +GEG FG V K +KK + A+KR+ + + R+ E V+ K+ H
Sbjct: 25 KFQDV--IGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHH 82
Query: 145 KNLVRLLGCCIDKDEKILIYEYMPNKSLDFFL-------FDP------------TKRMLL 185
N++ LLG C + L EY P+ +L FL DP + + LL
Sbjct: 83 PNIINLLGACEHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLL 142
Query: 186 DWSA------NYSSR-------LKVSNILLDKDINPKISDFGMARICGGNELQANTSRIV 232
++A +Y S+ L NIL+ ++ KI+DFG++R G E+ +
Sbjct: 143 HFAADVARGMDYLSQKQFIHRNLAARNILVGENYVAKIADFGLSR---GQEVYVKKTMGR 199
Query: 233 GTYGYMSPEYAIQGIFSIKSDVFSFGVLLLEIVS 266
+M+ E +++ SDV+S+GVLL EIVS
Sbjct: 200 LPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVS 233
>pdb|1K9A|A Chain A, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|B Chain B, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|C Chain C, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|D Chain D, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|E Chain E, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|F Chain F, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
Length = 450
Score = 68.9 bits (167), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 59/191 (30%), Positives = 99/191 (51%), Gaps = 31/191 (16%)
Query: 97 LGEGGFGPVYKGVLKKGDEIAVKRLPGRSGQGLREMKNEASVIAKVQHKNLVRLLGCCID 156
+G+G FG V G + G+++AVK + ++ + EASV+ +++H NLV+LLG ++
Sbjct: 201 IGKGEFGDVMLGDYR-GNKVAVKCI--KNDATAQAFLAEASVMTQLRHSNLVQLLGVIVE 257
Query: 157 KDEKI-LIYEYMPNKSL-DF----------------FLFDPTKRMLLDWSANYSSR-LKV 197
+ + ++ EYM SL D+ F D + M N+ R L
Sbjct: 258 EKGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLEGNNFVHRDLAA 317
Query: 198 SNILLDKDINPKISDFGMARICGGNELQANTSRIVGT--YGYMSPEYAIQGIFSIKSDVF 255
N+L+ +D K+SDFG+ + +A++++ G + +PE + FS KSDV+
Sbjct: 318 RNVLVSEDNVAKVSDFGLTK-------EASSTQDTGKLPVKWTAPEALREKKFSTKSDVW 370
Query: 256 SFGVLLLEIVS 266
SFG+LL EI S
Sbjct: 371 SFGILLWEIYS 381
>pdb|1FVR|A Chain A, Tie2 Kinase Domain
pdb|1FVR|B Chain B, Tie2 Kinase Domain
Length = 327
Score = 68.9 bits (167), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 65/214 (30%), Positives = 101/214 (47%), Gaps = 42/214 (19%)
Query: 90 KFSDANKLGEGGFGPVYKGVLKKGD---EIAVKRLPGRSGQG-LREMKNEASVIAKV-QH 144
KF D +GEG FG V K +KK + A+KR+ + + R+ E V+ K+ H
Sbjct: 28 KFQDV--IGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHH 85
Query: 145 KNLVRLLGCCIDKDEKILIYEYMPNKSLDFFL-------FDP------------TKRMLL 185
N++ LLG C + L EY P+ +L FL DP + + LL
Sbjct: 86 PNIINLLGACEHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLL 145
Query: 186 DWSA------NYSSR-------LKVSNILLDKDINPKISDFGMARICGGNELQANTSRIV 232
++A +Y S+ L NIL+ ++ KI+DFG++R G E+ +
Sbjct: 146 HFAADVARGMDYLSQKQFIHRDLAARNILVGENYVAKIADFGLSR---GQEVYVKKTMGR 202
Query: 233 GTYGYMSPEYAIQGIFSIKSDVFSFGVLLLEIVS 266
+M+ E +++ SDV+S+GVLL EIVS
Sbjct: 203 LPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVS 236
>pdb|3SXR|A Chain A, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complex With Dasatinib
pdb|3SXR|B Chain B, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complex With Dasatinib
pdb|3SXS|A Chain A, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complexed With Pp2
Length = 268
Score = 68.9 bits (167), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 71/265 (26%), Positives = 110/265 (41%), Gaps = 42/265 (15%)
Query: 95 NKLGEGGFGPVYKGVLKKGDEIAVKRLPGRSGQGLREMKNEASVIAKVQHKNLVRLLGCC 154
+LG G FG V G K ++AVK + S E EA + K+ H LV+ G C
Sbjct: 14 KELGSGQFGVVKLGKWKGQYDVAVKMIKEGS-MSEDEFFQEAQTMMKLSHPKLVKFYGVC 72
Query: 155 IDKDEKILIYEYMPNKSLDFFL----------------FDPTKRMLLDWSANYSSR-LKV 197
+ ++ EY+ N L +L +D + M S + R L
Sbjct: 73 SKEYPIYIVTEYISNGCLLNYLRSHGKGLEPSQLLEMCYDVCEGMAFLESHQFIHRDLAA 132
Query: 198 SNILLDKDINPKISDFGMARICGGNELQANTSRIVGT---YGYMSPEYAIQGIFSIKSDV 254
N L+D+D+ K+SDFGM R ++ ++ VGT + +PE +S KSDV
Sbjct: 133 RNCLVDRDLCVKVSDFGMTRYVLDDQYVSS----VGTKFPVKWSAPEVFHYFKYSSKSDV 188
Query: 255 FSFGVLLLEIVS-GKKTTGFYRTDSLTLLGYAWDLWTSNRTLELIDPILEDEYSSKHMLL 313
++FG+L+ E+ S GK Y + L ++ L P L +
Sbjct: 189 WAFGILMWEVFSLGKMPYDLYTNSEVVL--------KVSQGHRLYRPHLASD-------- 232
Query: 314 RYVNIALLCVQESADDRPTMNEVVS 338
I C E + RPT +++S
Sbjct: 233 TIYQIMYSCWHELPEKRPTFQQLLS 257
>pdb|3II5|A Chain A, The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimidine
Inhibitor
pdb|3II5|B Chain B, The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimidine
Inhibitor
Length = 306
Score = 68.9 bits (167), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 58/203 (28%), Positives = 101/203 (49%), Gaps = 37/203 (18%)
Query: 94 ANKLGEGGFGPVYKGVLKKGDEIAVKRL--PGRSGQGLREMKNEASVIAKVQHKNLVRLL 151
++G G FG VYKG K ++AVK L + Q L+ KNE V+ K +H N++ +
Sbjct: 40 GQRIGSGSFGTVYKG--KWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFM 97
Query: 152 GCCIDKDEKILIYEYMPNKSLDFFL------FDPTKRMLLDWSANYSS------------ 193
G K + ++ ++ SL L F+ K L+D + +
Sbjct: 98 GYST-KPQLAIVTQWCEGSSLYHHLHIIETKFEMIK--LIDIARQTAQGMDYLHAKSIIH 154
Query: 194 -RLKVSNILLDKDINPKISDFGMA----RICGGNELQANTSRIVGTYGYMSPE---YAIQ 245
LK +NI L +D+ KI DFG+A R G ++ + ++ G+ +M+PE +
Sbjct: 155 RDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFE----QLSGSILWMAPEVIRMQDK 210
Query: 246 GIFSIKSDVFSFGVLLLEIVSGK 268
+S +SDV++FG++L E+++G+
Sbjct: 211 NPYSFQSDVYAFGIVLYELMTGQ 233
>pdb|2YJR|A Chain A, Structure Of F1174l Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 68.6 bits (166), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 64/207 (30%), Positives = 92/207 (44%), Gaps = 41/207 (19%)
Query: 97 LGEGGFGPVYKGVLKKGD------EIAVKRLPGR-SGQGLREMKNEASVIAKVQHKNLVR 149
LG G FG VY+G + ++AVK LP S Q + EA +I+K+ H+N+VR
Sbjct: 53 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKLNHQNIVR 112
Query: 150 LLGCCIDKDEKILIYEYMPNKSLDFFLFDPTKRMLLDWSANYSSRLKVS----------- 198
+G + + ++ E M L FL + R S L V+
Sbjct: 113 CIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLE 172
Query: 199 -NILLDKDIN--------------PKISDFGMARICGGNELQANTSRIVGT----YGYMS 239
N + +DI KI DFGMAR + +A+ R G +M
Sbjct: 173 ENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMAR----DIYRASYYRKGGCAMLPVKWMP 228
Query: 240 PEYAIQGIFSIKSDVFSFGVLLLEIVS 266
PE ++GIF+ K+D +SFGVLL EI S
Sbjct: 229 PEAFMEGIFTSKTDTWSFGVLLWEIFS 255
>pdb|3D4Q|A Chain A, Pyrazole-Based Inhibitors Of B-Raf Kinase
pdb|3D4Q|B Chain B, Pyrazole-Based Inhibitors Of B-Raf Kinase
pdb|3PSB|A Chain A, Furo[2,3-C]pyridine-Based Indanone Oximes As Potent And
Selective B- Raf Inhibitors
pdb|3PSB|B Chain B, Furo[2,3-C]pyridine-Based Indanone Oximes As Potent And
Selective B- Raf Inhibitors
pdb|3PPJ|A Chain A, Human B-Raf Kinase In Complex With A Furopyridine
Inhibitor
pdb|3PPJ|B Chain B, Human B-Raf Kinase In Complex With A Furopyridine
Inhibitor
pdb|3PPK|A Chain A, Human B-Raf Kinase In Complex With A Non-Oxime
Furopyridine Inhibitor
pdb|3PPK|B Chain B, Human B-Raf Kinase In Complex With A Non-Oxime
Furopyridine Inhibitor
pdb|3PRF|A Chain A, Crystal Structure Of Human B-Raf Kinase Domain In Complex
With A Non- Oxime Furopyridine Inhibitor
pdb|3PRF|B Chain B, Crystal Structure Of Human B-Raf Kinase Domain In Complex
With A Non- Oxime Furopyridine Inhibitor
pdb|3PRI|A Chain A, Crystal Structure Of Human B-Raf Kinase In Complex With A
Non-Oxime Furopyridine Inhibitor
pdb|3PRI|B Chain B, Crystal Structure Of Human B-Raf Kinase In Complex With A
Non-Oxime Furopyridine Inhibitor
pdb|3Q4C|A Chain A, Crystal Structure Of Wild Type Braf Kinase Domain In
Complex With Organometallic Inhibitor Cns292
pdb|3Q4C|B Chain B, Crystal Structure Of Wild Type Braf Kinase Domain In
Complex With Organometallic Inhibitor Cns292
pdb|3PSD|A Chain A, Non-Oxime Pyrazole Based Inhibitors Of B-Raf Kinase
pdb|3PSD|B Chain B, Non-Oxime Pyrazole Based Inhibitors Of B-Raf Kinase
pdb|3SKC|A Chain A, Human B-Raf Kinase In Complex With An Amide Linked
Pyrazolopyridine Inhibitor
pdb|3SKC|B Chain B, Human B-Raf Kinase In Complex With An Amide Linked
Pyrazolopyridine Inhibitor
pdb|3TV4|A Chain A, Human B-Raf Kinase Domain In Complex With An Bromopyridine
Benzamide Inhibitor
pdb|3TV4|B Chain B, Human B-Raf Kinase Domain In Complex With An Bromopyridine
Benzamide Inhibitor
pdb|3TV6|A Chain A, Human B-Raf Kinase Domain In Complex With A
Methoxypyrazolopyridinyl Benzamide Inhibitor
pdb|3TV6|B Chain B, Human B-Raf Kinase Domain In Complex With A
Methoxypyrazolopyridinyl Benzamide Inhibitor
pdb|4E26|A Chain A, Braf In Complex With An Organic Inhibitor 7898734
pdb|4E26|B Chain B, Braf In Complex With An Organic Inhibitor 7898734
pdb|4E4X|A Chain A, Crystal Structure Of B-Raf Kinase Domain In Complex With A
Dihydropyrido[2,3-D]pyrimidinone-Based Inhibitor
pdb|4E4X|B Chain B, Crystal Structure Of B-Raf Kinase Domain In Complex With A
Dihydropyrido[2,3-D]pyrimidinone-Based Inhibitor
pdb|4G9C|A Chain A, Human B-Raf Kinase Domain Bound To A Type Ii
Pyrazolopyridine Inhibitor
pdb|4G9C|B Chain B, Human B-Raf Kinase Domain Bound To A Type Ii
Pyrazolopyridine Inhibitor
Length = 307
Score = 68.6 bits (166), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 58/203 (28%), Positives = 101/203 (49%), Gaps = 37/203 (18%)
Query: 94 ANKLGEGGFGPVYKGVLKKGDEIAVKRL--PGRSGQGLREMKNEASVIAKVQHKNLVRLL 151
++G G FG VYKG K ++AVK L + Q L+ KNE V+ K +H N++ +
Sbjct: 41 GQRIGSGSFGTVYKG--KWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFM 98
Query: 152 GCCIDKDEKILIYEYMPNKSLDFFL------FDPTKRMLLDWSANYSS------------ 193
G K + ++ ++ SL L F+ K L+D + +
Sbjct: 99 GYST-KPQLAIVTQWCEGSSLYHHLHIIETKFEMIK--LIDIARQTAQGMDYLHAKSIIH 155
Query: 194 -RLKVSNILLDKDINPKISDFGMA----RICGGNELQANTSRIVGTYGYMSPE---YAIQ 245
LK +NI L +D+ KI DFG+A R G ++ + ++ G+ +M+PE +
Sbjct: 156 RDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFE----QLSGSILWMAPEVIRMQDK 211
Query: 246 GIFSIKSDVFSFGVLLLEIVSGK 268
+S +SDV++FG++L E+++G+
Sbjct: 212 NPYSFQSDVYAFGIVLYELMTGQ 234
>pdb|3ZZW|A Chain A, Crystal Structure Of The Kinase Domain Of Ror2
pdb|3ZZW|B Chain B, Crystal Structure Of The Kinase Domain Of Ror2
Length = 289
Score = 68.6 bits (166), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 66/227 (29%), Positives = 110/227 (48%), Gaps = 51/227 (22%)
Query: 84 VSTATNKFSDANKLGEGGFGPVYKGVL------KKGDEIAVKRLPGRSGQGLRE-MKNEA 136
+S + +F + +LGE FG VYKG L ++ +A+K L ++ LRE ++EA
Sbjct: 6 ISLSAVRFME--ELGEDRFGKVYKGHLFGPAPGEQTQAVAIKTLKDKAEGPLREEFRHEA 63
Query: 137 SVIAKVQHKNLVRLLGCCIDKDEKI-LIYEYMPNKSLDFFLF-------------DPTKR 182
+ A++QH N+V LLG + KD+ + +I+ Y + L FL D T +
Sbjct: 64 MLRARLQHPNVVCLLG-VVTKDQPLSMIFSYCSHGDLHEFLVMRSPHSDVGSTDDDRTVK 122
Query: 183 MLLD-----------------WSANY--SSRLKVSNILLDKDINPKISDFGMARICGGNE 223
L+ S+++ L N+L+ +N KISD G+ R
Sbjct: 123 SALEPPDFVHLVAQIAAGMEYLSSHHVVHKDLATRNVLVYDKLNVKISDLGLFR----EV 178
Query: 224 LQANTSRIVGT----YGYMSPEYAIQGIFSIKSDVFSFGVLLLEIVS 266
A+ +++G +M+PE + G FSI SD++S+GV+L E+ S
Sbjct: 179 YAADYYKLLGNSLLPIRWMAPEAIMYGKFSIDSDIWSYGVVLWEVFS 225
>pdb|3AOX|A Chain A, X-Ray Crystal Structure Of Human Anaplastic Lymphoma
Kinase In Complex With Ch5424802
Length = 344
Score = 68.6 bits (166), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 71/260 (27%), Positives = 112/260 (43%), Gaps = 53/260 (20%)
Query: 56 IELPVNSKQTKRSKKKE----VDQLPLFSFSSVSTATNKFSDANK--------LGEGGFG 103
+++ + S + K SK + D P + F+ +++ + + + LG G FG
Sbjct: 2 MQMELQSPEYKLSKLRTSTIMTDYNPNYCFAGKTSSISDLKEVPRKNITLIRGLGHGAFG 61
Query: 104 PVYKGVLKKGD------EIAVKRLPGR-SGQGLREMKNEASVIAKVQHKNLVRLLGCCID 156
VY+G + ++AVK LP S Q + EA +I+K H+N+VR +G +
Sbjct: 62 EVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVRCIGVSLQ 121
Query: 157 KDEKILIYEYMPNKSLDFFLFDPTKRMLLDWSANYSSRLKVS------------NILLDK 204
+ ++ E M L FL + R S L V+ N + +
Sbjct: 122 SLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEENHFIHR 181
Query: 205 DIN--------------PKISDFGMARICGGNELQANTSRIVGT----YGYMSPEYAIQG 246
DI KI DFGMAR + +A+ R G +M PE ++G
Sbjct: 182 DIAARNCLLTCPGPGRVAKIGDFGMAR----DIYRASYYRKGGCAMLPVKWMPPEAFMEG 237
Query: 247 IFSIKSDVFSFGVLLLEIVS 266
IF+ K+D +SFGVLL EI S
Sbjct: 238 IFTSKTDTWSFGVLLWEIFS 257
>pdb|4G9R|A Chain A, B-Raf V600e Kinase Domain Bound To A Type Ii
Dihydroquinazoline Inhibitor
pdb|4G9R|B Chain B, B-Raf V600e Kinase Domain Bound To A Type Ii
Dihydroquinazoline Inhibitor
Length = 307
Score = 68.6 bits (166), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 58/203 (28%), Positives = 101/203 (49%), Gaps = 37/203 (18%)
Query: 94 ANKLGEGGFGPVYKGVLKKGDEIAVKRL--PGRSGQGLREMKNEASVIAKVQHKNLVRLL 151
++G G FG VYKG K ++AVK L + Q L+ KNE V+ K +H N++ +
Sbjct: 41 GQRIGSGSFGTVYKG--KWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFM 98
Query: 152 GCCIDKDEKILIYEYMPNKSLDFFL------FDPTKRMLLDWSANYSS------------ 193
G K + ++ ++ SL L F+ K L+D + +
Sbjct: 99 GYST-KPQLAIVTQWCEGSSLYHHLHIIETKFEMIK--LIDIARQTAQGMDYLHAKSIIH 155
Query: 194 -RLKVSNILLDKDINPKISDFGMA----RICGGNELQANTSRIVGTYGYMSPE---YAIQ 245
LK +NI L +D+ KI DFG+A R G ++ + ++ G+ +M+PE +
Sbjct: 156 RDLKSNNIFLHEDLTVKIGDFGLATEKSRWSGSHQFE----QLSGSILWMAPEVIRMQDK 211
Query: 246 GIFSIKSDVFSFGVLLLEIVSGK 268
+S +SDV++FG++L E+++G+
Sbjct: 212 NPYSFQSDVYAFGIVLYELMTGQ 234
>pdb|1I44|A Chain A, Crystallographic Studies Of An Activation Loop Mutant Of
The Insulin Receptor Tyrosine Kinase
Length = 306
Score = 68.6 bits (166), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 74/287 (25%), Positives = 120/287 (41%), Gaps = 48/287 (16%)
Query: 96 KLGEGGFGPVYKGVLK---KGD---EIAVKRLPGRSGQGLR-EMKNEASVIAKVQHKNLV 148
+LG+G FG VY+G + KG+ +AVK + + R E NEASV+ ++V
Sbjct: 24 ELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVV 83
Query: 149 RLLGCCIDKDEKILIYEYMPNKSLDFFLFD-------------PTKRMLLDWSANYSS-- 193
RLLG +++ E M + L +L PT + ++ +A +
Sbjct: 84 RLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGM 143
Query: 194 -----------RLKVSNILLDKDINPKISDFGMARICGGNELQANTSRIVGTYGYMSPEY 242
L N ++ D KI DFGM R + + +M+PE
Sbjct: 144 AYLNAKKFVHRDLAARNCMVAHDFTVKIGDFGMTRDIYETAYYRKGGKGLLPVRWMAPES 203
Query: 243 AIQGIFSIKSDVFSFGVLLLEIVSGKKTTGFYRTDSLTLLGYAWDLWTSNRTLELIDPIL 302
G+F+ SD++SFGV+L EI S + + + +L + D L+ D
Sbjct: 204 LKDGVFTTSSDMWSFGVVLWEITSLAEQP-YQGLSNEQVLKFVMD----GGYLDQPDNCP 258
Query: 303 EDEYSSKHMLLRYVNIALLCVQESADDRPTMNEVVSMLTDEAAALFP 349
E R ++ +C Q + RPT E+V++L D+ FP
Sbjct: 259 E----------RVTDLMRMCWQFNPKMRPTFLEIVNLLKDDLHPSFP 295
>pdb|3D7U|A Chain A, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3D7U|C Chain C, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 263
Score = 68.6 bits (166), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 59/191 (30%), Positives = 99/191 (51%), Gaps = 31/191 (16%)
Query: 97 LGEGGFGPVYKGVLKKGDEIAVKRLPGRSGQGLREMKNEASVIAKVQHKNLVRLLGCCID 156
+G+G FG V G + G+++AVK + ++ + EASV+ +++H NLV+LLG ++
Sbjct: 14 IGKGEFGDVMLGDYR-GNKVAVKCI--KNDATAQAFLAEASVMTQLRHSNLVQLLGVIVE 70
Query: 157 KDEKI-LIYEYMPNKSL-DF----------------FLFDPTKRMLLDWSANYSSR-LKV 197
+ + ++ EYM SL D+ F D + M N+ R L
Sbjct: 71 EKGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLEGNNFVHRDLAA 130
Query: 198 SNILLDKDINPKISDFGMARICGGNELQANTSRIVGT--YGYMSPEYAIQGIFSIKSDVF 255
N+L+ +D K+SDFG+ + +A++++ G + +PE + FS KSDV+
Sbjct: 131 RNVLVSEDNVAKVSDFGLTK-------EASSTQDTGKLPVKWTAPEALREKKFSTKSDVW 183
Query: 256 SFGVLLLEIVS 266
SFG+LL EI S
Sbjct: 184 SFGILLWEIYS 194
>pdb|4E6D|A Chain A, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 7
pdb|4E6D|B Chain B, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 7
pdb|4E6Q|A Chain A, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 12
pdb|4E6Q|B Chain B, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 12
Length = 298
Score = 68.6 bits (166), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 58/200 (29%), Positives = 96/200 (48%), Gaps = 33/200 (16%)
Query: 96 KLGEGGFGPV----YKGVLKK-GDEIAVKRLPGRSGQGLREMKNEASVIAKVQHKNLVRL 150
+LG+G FG V Y + G+ +AVK+L + + LR+ + E ++ +QH N+V+
Sbjct: 20 QLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKY 79
Query: 151 LGCCIDKDEK--ILIYEYMPNKSLDFFLFDPTKRM----LLDWSAN------------YS 192
G C + LI E++P SL +L +R+ LL +++ Y
Sbjct: 80 KGVCYSAGRRNLKLIMEFLPYGSLREYLQKHKERIDHIKLLQYTSQICKGMEYLGTKRYI 139
Query: 193 SR-LKVSNILLDKDINPKISDFGMARICGGNELQANTSRIVGTYG-----YMSPEYAIQG 246
R L NIL++ + KI DFG+ ++ Q V G + +PE +
Sbjct: 140 HRDLATRNILVENENRVKIGDFGLTKVLP----QDKEXXKVKEPGESPIFWYAPESLTES 195
Query: 247 IFSIKSDVFSFGVLLLEIVS 266
FS+ SDV+SFGV+L E+ +
Sbjct: 196 KFSVASDVWSFGVVLYELFT 215
>pdb|3O23|A Chain A, Human Unphosphorylated Igf1-R Kinase Domain In Complex
With An Hydantoin Inhibitor
Length = 305
Score = 68.6 bits (166), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 77/307 (25%), Positives = 125/307 (40%), Gaps = 54/307 (17%)
Query: 86 TATNKFSDANKLGEGGFGPVYKGVLKK--GDE----IAVKRLPGRSGQGLR-EMKNEASV 138
A K + + +LG+G FG VY+GV K DE +A+K + + R E NEASV
Sbjct: 13 VAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASV 72
Query: 139 IAKVQHKNLVRLLGCCIDKDEKILIYEYMPNKSLDFFLFDPTKRM--------------- 183
+ + ++VRLLG ++I E M L +L M
Sbjct: 73 MKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMI 132
Query: 184 -----------LLDWSANYSSRLKVSNILLDKDINPKISDFGMARICGGNELQANTSRIV 232
L+ + L N ++ +D KI DFGM R + + +
Sbjct: 133 QMAGEIADGMAYLNANKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKGGKGL 192
Query: 233 GTYGYMSPEYAIQGIFSIKSDVFSFGVLLLEIVSGKKTTGFYRTDSLTLLGYAWDLWTSN 292
+MSPE G+F+ SDV+SFGV+L EI TL + ++
Sbjct: 193 LPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIA--------------TLAEQPYQGLSNE 238
Query: 293 RTLELI--DPILEDEYSSKHMLLRYVNIALLCVQESADDRPTMNEVVSMLTDEAAALFPP 350
+ L + +L+ + ML + +C Q + RP+ E++S + +E F
Sbjct: 239 QVLRFVMEGGLLDKPDNCPDMLFELMR---MCWQYNPKMRPSFLEIISSIKEEMEPGF-- 293
Query: 351 KQPAFSY 357
++ +F Y
Sbjct: 294 REVSFYY 300
>pdb|3D94|A Chain A, Crystal Structure Of The Insulin-Like Growth Factor-1
Receptor Kinase In Complex With Pqip
Length = 301
Score = 68.6 bits (166), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 78/307 (25%), Positives = 125/307 (40%), Gaps = 54/307 (17%)
Query: 86 TATNKFSDANKLGEGGFGPVYKGVLKK--GDE----IAVKRLPGRSGQGLR-EMKNEASV 138
A K + + +LG+G FG VY+GV K DE +A+K + + R E NEASV
Sbjct: 9 VAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASV 68
Query: 139 IAKVQHKNLVRLLGCCIDKDEKILIYEYMPNKSLDFFLFDPTKRM--------------- 183
+ + ++VRLLG ++I E M L +L M
Sbjct: 69 MKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMI 128
Query: 184 -----------LLDWSANYSSRLKVSNILLDKDINPKISDFGMARICGGNELQANTSRIV 232
L+ + L N + +D KI DFGM R + + +
Sbjct: 129 QMAGEIADGMAYLNANKFVHRDLAARNCXVAEDFTVKIGDFGMTRDIYETDYYRKGGKGL 188
Query: 233 GTYGYMSPEYAIQGIFSIKSDVFSFGVLLLEIVSGKKTTGFYRTDSLTLLGYAWDLWTSN 292
+MSPE G+F+ SDV+SFGV+L EI TL + ++
Sbjct: 189 LPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIA--------------TLAEQPYQGLSNE 234
Query: 293 RTLELI--DPILEDEYSSKHMLLRYVNIALLCVQESADDRPTMNEVVSMLTDEAAALFPP 350
+ L + +L+ + MLL + +C Q + RP+ E++S + +E F
Sbjct: 235 QVLRFVMEGGLLDKPDNCPDMLLELMR---MCWQYNPKMRPSFLEIISSIKEEMEPGF-- 289
Query: 351 KQPAFSY 357
++ +F Y
Sbjct: 290 REVSFYY 296
>pdb|1JQH|A Chain A, Igf-1 Receptor Kinase Domain
pdb|1JQH|B Chain B, Igf-1 Receptor Kinase Domain
pdb|1JQH|C Chain C, Igf-1 Receptor Kinase Domain
Length = 308
Score = 68.6 bits (166), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 77/307 (25%), Positives = 125/307 (40%), Gaps = 54/307 (17%)
Query: 86 TATNKFSDANKLGEGGFGPVYKGVLKK--GDE----IAVKRLPGRSGQGLR-EMKNEASV 138
A K + + +LG+G FG VY+GV K DE +A+K + + R E NEASV
Sbjct: 16 VAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASV 75
Query: 139 IAKVQHKNLVRLLGCCIDKDEKILIYEYMPNKSLDFFLFDPTKRM--------------- 183
+ + ++VRLLG ++I E M L +L M
Sbjct: 76 MKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMI 135
Query: 184 -----------LLDWSANYSSRLKVSNILLDKDINPKISDFGMARICGGNELQANTSRIV 232
L+ + L N ++ +D KI DFGM R + + +
Sbjct: 136 QMAGEIADGMAYLNANKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKGGKGL 195
Query: 233 GTYGYMSPEYAIQGIFSIKSDVFSFGVLLLEIVSGKKTTGFYRTDSLTLLGYAWDLWTSN 292
+MSPE G+F+ SDV+SFGV+L EI TL + ++
Sbjct: 196 LPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIA--------------TLAEQPYQGLSNE 241
Query: 293 RTLELI--DPILEDEYSSKHMLLRYVNIALLCVQESADDRPTMNEVVSMLTDEAAALFPP 350
+ L + +L+ + ML + +C Q + RP+ E++S + +E F
Sbjct: 242 QVLRFVMEGGLLDKPDNCPDMLFELMR---MCWQYNPKMRPSFLEIISSIKEEMEPGF-- 296
Query: 351 KQPAFSY 357
++ +F Y
Sbjct: 297 REVSFYY 303
>pdb|1BYG|A Chain A, Kinase Domain Of Human C-Terminal Src Kinase (Csk) In
Complex With Inhibitor Staurosporine
Length = 278
Score = 68.6 bits (166), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 59/191 (30%), Positives = 99/191 (51%), Gaps = 31/191 (16%)
Query: 97 LGEGGFGPVYKGVLKKGDEIAVKRLPGRSGQGLREMKNEASVIAKVQHKNLVRLLGCCID 156
+G+G FG V G + G+++AVK + ++ + EASV+ +++H NLV+LLG ++
Sbjct: 29 IGKGEFGDVMLGDYR-GNKVAVKCI--KNDATAQAFLAEASVMTQLRHSNLVQLLGVIVE 85
Query: 157 KDEKI-LIYEYMPNKSL-DF----------------FLFDPTKRMLLDWSANYSSR-LKV 197
+ + ++ EYM SL D+ F D + M N+ R L
Sbjct: 86 EKGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLEGNNFVHRDLAA 145
Query: 198 SNILLDKDINPKISDFGMARICGGNELQANTSRIVGT--YGYMSPEYAIQGIFSIKSDVF 255
N+L+ +D K+SDFG+ + +A++++ G + +PE + FS KSDV+
Sbjct: 146 RNVLVSEDNVAKVSDFGLTK-------EASSTQDTGKLPVKWTAPEALREKKFSTKSDVW 198
Query: 256 SFGVLLLEIVS 266
SFG+LL EI S
Sbjct: 199 SFGILLWEIYS 209
>pdb|3QQU|A Chain A, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|B Chain B, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|C Chain C, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|D Chain D, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
Length = 301
Score = 68.2 bits (165), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 77/307 (25%), Positives = 125/307 (40%), Gaps = 54/307 (17%)
Query: 86 TATNKFSDANKLGEGGFGPVYKGVLKK--GDE----IAVKRLPGRSGQGLR-EMKNEASV 138
A K + + +LG+G FG VY+GV K DE +A+K + + R E NEASV
Sbjct: 9 VAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASV 68
Query: 139 IAKVQHKNLVRLLGCCIDKDEKILIYEYMPNKSLDFFLFDPTKRM--------------- 183
+ + ++VRLLG ++I E M L +L M
Sbjct: 69 MKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMI 128
Query: 184 -----------LLDWSANYSSRLKVSNILLDKDINPKISDFGMARICGGNELQANTSRIV 232
L+ + L N ++ +D KI DFGM R + + +
Sbjct: 129 QMAGEIADGMAYLNANKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKGGKGL 188
Query: 233 GTYGYMSPEYAIQGIFSIKSDVFSFGVLLLEIVSGKKTTGFYRTDSLTLLGYAWDLWTSN 292
+MSPE G+F+ SDV+SFGV+L EI TL + ++
Sbjct: 189 LPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIA--------------TLAEQPYQGLSNE 234
Query: 293 RTLELI--DPILEDEYSSKHMLLRYVNIALLCVQESADDRPTMNEVVSMLTDEAAALFPP 350
+ L + +L+ + ML + +C Q + RP+ E++S + +E F
Sbjct: 235 QVLRFVMEGGLLDKPDNCPDMLFELMR---MCWQYNPKMRPSFLEIISSIKEEMEPGF-- 289
Query: 351 KQPAFSY 357
++ +F Y
Sbjct: 290 REVSFYY 296
>pdb|2OJ9|A Chain A, Structure Of Igf-1r Kinase Domain Complexed With A
Benzimidazole Inhibitor
pdb|3NW5|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (11b)
pdb|3NW6|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (11a)
pdb|3NW7|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (34)
Length = 307
Score = 68.2 bits (165), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 77/307 (25%), Positives = 125/307 (40%), Gaps = 54/307 (17%)
Query: 86 TATNKFSDANKLGEGGFGPVYKGVLKK--GDE----IAVKRLPGRSGQGLR-EMKNEASV 138
A K + + +LG+G FG VY+GV K DE +A+K + + R E NEASV
Sbjct: 15 VAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASV 74
Query: 139 IAKVQHKNLVRLLGCCIDKDEKILIYEYMPNKSLDFFLFDPTKRM--------------- 183
+ + ++VRLLG ++I E M L +L M
Sbjct: 75 MKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMI 134
Query: 184 -----------LLDWSANYSSRLKVSNILLDKDINPKISDFGMARICGGNELQANTSRIV 232
L+ + L N ++ +D KI DFGM R + + +
Sbjct: 135 QMAGEIADGMAYLNANKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKGGKGL 194
Query: 233 GTYGYMSPEYAIQGIFSIKSDVFSFGVLLLEIVSGKKTTGFYRTDSLTLLGYAWDLWTSN 292
+MSPE G+F+ SDV+SFGV+L EI TL + ++
Sbjct: 195 LPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIA--------------TLAEQPYQGLSNE 240
Query: 293 RTLELI--DPILEDEYSSKHMLLRYVNIALLCVQESADDRPTMNEVVSMLTDEAAALFPP 350
+ L + +L+ + ML + +C Q + RP+ E++S + +E F
Sbjct: 241 QVLRFVMEGGLLDKPDNCPDMLFELMR---MCWQYNPKMRPSFLEIISSIKEEMEPGF-- 295
Query: 351 KQPAFSY 357
++ +F Y
Sbjct: 296 REVSFYY 302
>pdb|3LVP|A Chain A, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|B Chain B, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|C Chain C, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|D Chain D, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
Length = 336
Score = 68.2 bits (165), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 77/307 (25%), Positives = 125/307 (40%), Gaps = 54/307 (17%)
Query: 86 TATNKFSDANKLGEGGFGPVYKGVLKK--GDE----IAVKRLPGRSGQGLR-EMKNEASV 138
A K + + +LG+G FG VY+GV K DE +A+K + + R E NEASV
Sbjct: 44 VAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASV 103
Query: 139 IAKVQHKNLVRLLGCCIDKDEKILIYEYMPNKSLDFFLFDPTKRM--------------- 183
+ + ++VRLLG ++I E M L +L M
Sbjct: 104 MKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMI 163
Query: 184 -----------LLDWSANYSSRLKVSNILLDKDINPKISDFGMARICGGNELQANTSRIV 232
L+ + L N ++ +D KI DFGM R + + +
Sbjct: 164 QMAGEIADGMAYLNANKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKGGKGL 223
Query: 233 GTYGYMSPEYAIQGIFSIKSDVFSFGVLLLEIVSGKKTTGFYRTDSLTLLGYAWDLWTSN 292
+MSPE G+F+ SDV+SFGV+L EI TL + ++
Sbjct: 224 LPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIA--------------TLAEQPYQGLSNE 269
Query: 293 RTLELI--DPILEDEYSSKHMLLRYVNIALLCVQESADDRPTMNEVVSMLTDEAAALFPP 350
+ L + +L+ + ML + +C Q + RP+ E++S + +E F
Sbjct: 270 QVLRFVMEGGLLDKPDNCPDMLFELMR---MCWQYNPKMRPSFLEIISSIKEEMEPGF-- 324
Query: 351 KQPAFSY 357
++ +F Y
Sbjct: 325 REVSFYY 331
>pdb|2YJS|A Chain A, Structure Of C1156y Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 68.2 bits (165), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 64/207 (30%), Positives = 91/207 (43%), Gaps = 41/207 (19%)
Query: 97 LGEGGFGPVYKGVLKKGD------EIAVKRLPG-RSGQGLREMKNEASVIAKVQHKNLVR 149
LG G FG VY+G + ++AVK LP S Q + EA +I+K H+N+VR
Sbjct: 53 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVYSEQDELDFLMEALIISKFNHQNIVR 112
Query: 150 LLGCCIDKDEKILIYEYMPNKSLDFFLFDPTKRMLLDWSANYSSRLKVS----------- 198
+G + + ++ E M L FL + R S L V+
Sbjct: 113 CIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLE 172
Query: 199 -NILLDKDIN--------------PKISDFGMARICGGNELQANTSRIVGT----YGYMS 239
N + +DI KI DFGMAR + +A+ R G +M
Sbjct: 173 ENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMAR----DIYRASYYRKGGCAMLPVKWMP 228
Query: 240 PEYAIQGIFSIKSDVFSFGVLLLEIVS 266
PE ++GIF+ K+D +SFGVLL EI S
Sbjct: 229 PEAFMEGIFTSKTDTWSFGVLLWEIFS 255
>pdb|1P4O|A Chain A, Structure Of Apo Unactivated Igf-1r Kinase Domain At 1.5a
Resolution.
pdb|1P4O|B Chain B, Structure Of Apo Unactivated Igf-1r Kinase Domain At 1.5a
Resolution
Length = 322
Score = 68.2 bits (165), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 76/307 (24%), Positives = 127/307 (41%), Gaps = 54/307 (17%)
Query: 86 TATNKFSDANKLGEGGFGPVYKGVLKK--GDE----IAVKRLPGRSGQGLR-EMKNEASV 138
A K + + +LG+G FG VY+GV K DE +A+K + + R E NEASV
Sbjct: 22 VAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASV 81
Query: 139 IAKVQHKNLVRLLGCCIDKDEKILIYEYMPNKSLDFFL-------------FDPTKRMLL 185
+ + ++VRLLG ++I E M L +L P+ ++
Sbjct: 82 MKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPAMANNPVLAPPSLSKMI 141
Query: 186 DWSANYSS-------------RLKVSNILLDKDINPKISDFGMARICGGNELQANTSRIV 232
+ + L N ++ +D KI DFGM R + + +
Sbjct: 142 QMAGEIADGMAYLNANKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKGGKGL 201
Query: 233 GTYGYMSPEYAIQGIFSIKSDVFSFGVLLLEIVSGKKTTGFYRTDSLTLLGYAWDLWTSN 292
+MSPE G+F+ SDV+SFGV+L EI TL + ++
Sbjct: 202 LPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIA--------------TLAEQPYQGLSNE 247
Query: 293 RTLELI--DPILEDEYSSKHMLLRYVNIALLCVQESADDRPTMNEVVSMLTDEAAALFPP 350
+ L + +L+ + ML + +C Q + RP+ E++S + +E F
Sbjct: 248 QVLRFVMEGGLLDKPDNCPDMLFELMR---MCWQYNPKMRPSFLEIISSIKEEMEPGF-- 302
Query: 351 KQPAFSY 357
++ +F Y
Sbjct: 303 REVSFYY 309
>pdb|3I81|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With Bms-754807
[1-(4-((5-Cyclopropyl-
1h-Pyrazol-3-Yl)amino)pyrrolo[2,1-F][1,2,
4]triazin-2-Yl)-N-
(6-Fluoro-3-Pyridinyl)-2-Methyl-L-Prolinamide]
Length = 315
Score = 68.2 bits (165), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 77/307 (25%), Positives = 125/307 (40%), Gaps = 54/307 (17%)
Query: 86 TATNKFSDANKLGEGGFGPVYKGVLKK--GDE----IAVKRLPGRSGQGLR-EMKNEASV 138
A K + + +LG+G FG VY+GV K DE +A+K + + R E NEASV
Sbjct: 15 VAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASV 74
Query: 139 IAKVQHKNLVRLLGCCIDKDEKILIYEYMPNKSLDFFLFDPTKRM--------------- 183
+ + ++VRLLG ++I E M L +L M
Sbjct: 75 MKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMI 134
Query: 184 -----------LLDWSANYSSRLKVSNILLDKDINPKISDFGMARICGGNELQANTSRIV 232
L+ + L N ++ +D KI DFGM R + + +
Sbjct: 135 QMAGEIADGMAYLNANKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKGGKGL 194
Query: 233 GTYGYMSPEYAIQGIFSIKSDVFSFGVLLLEIVSGKKTTGFYRTDSLTLLGYAWDLWTSN 292
+MSPE G+F+ SDV+SFGV+L EI TL + ++
Sbjct: 195 LPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIA--------------TLAEQPYQGLSNE 240
Query: 293 RTLELI--DPILEDEYSSKHMLLRYVNIALLCVQESADDRPTMNEVVSMLTDEAAALFPP 350
+ L + +L+ + ML + +C Q + RP+ E++S + +E F
Sbjct: 241 QVLRFVMEGGLLDKPDNCPDMLFELMR---MCWQYNPKMRPSFLEIISSIKEEMEPGF-- 295
Query: 351 KQPAFSY 357
++ +F Y
Sbjct: 296 REVSFYY 302
>pdb|1M7N|A Chain A, Crystal Structure Of Unactivated Apo Insulin-Like Growth
Factor-1 Receptor Kinase Domain
pdb|1M7N|B Chain B, Crystal Structure Of Unactivated Apo Insulin-Like Growth
Factor-1 Receptor Kinase Domain
Length = 322
Score = 68.2 bits (165), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 77/307 (25%), Positives = 125/307 (40%), Gaps = 54/307 (17%)
Query: 86 TATNKFSDANKLGEGGFGPVYKGVLKK--GDE----IAVKRLPGRSGQGLR-EMKNEASV 138
A K + + +LG+G FG VY+GV K DE +A+K + + R E NEASV
Sbjct: 22 VAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASV 81
Query: 139 IAKVQHKNLVRLLGCCIDKDEKILIYEYMPNKSLDFFLFDPTKRM--------------- 183
+ + ++VRLLG ++I E M L +L M
Sbjct: 82 MKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMI 141
Query: 184 -----------LLDWSANYSSRLKVSNILLDKDINPKISDFGMARICGGNELQANTSRIV 232
L+ + L N ++ +D KI DFGM R + + +
Sbjct: 142 QMAGEIADGMAYLNANKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKGGKGL 201
Query: 233 GTYGYMSPEYAIQGIFSIKSDVFSFGVLLLEIVSGKKTTGFYRTDSLTLLGYAWDLWTSN 292
+MSPE G+F+ SDV+SFGV+L EI TL + ++
Sbjct: 202 LPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIA--------------TLAEQPYQGLSNE 247
Query: 293 RTLELI--DPILEDEYSSKHMLLRYVNIALLCVQESADDRPTMNEVVSMLTDEAAALFPP 350
+ L + +L+ + ML + +C Q + RP+ E++S + +E F
Sbjct: 248 QVLRFVMEGGLLDKPDNCPDMLFELMR---MCWQYNPKMRPSFLEIISSIKEEMEPGF-- 302
Query: 351 KQPAFSY 357
++ +F Y
Sbjct: 303 REVSFYY 309
>pdb|3C4C|A Chain A, B-Raf Kinase In Complex With Plx4720
pdb|3C4C|B Chain B, B-Raf Kinase In Complex With Plx4720
Length = 280
Score = 68.2 bits (165), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 58/202 (28%), Positives = 99/202 (49%), Gaps = 35/202 (17%)
Query: 94 ANKLGEGGFGPVYKGVLKKGDEIAVKRL--PGRSGQGLREMKNEASVIAKVQHKNLVRLL 151
++G G FG VYKG K ++AVK L + Q L+ KNE V+ K +H N++ +
Sbjct: 17 GQRIGSGSFGTVYKG--KWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFM 74
Query: 152 GCCIDKDEKILIYEYMPNKSLDFFLFDPTKRM----LLDWSANYSSR------------- 194
G K + ++ ++ SL L + L+D A ++R
Sbjct: 75 GYST-KPQLAIVTQWCEGSSLYHHLHASETKFEMKKLID-IARQTARGMDYLHAKSIIHR 132
Query: 195 -LKVSNILLDKDINPKISDFGMA----RICGGNELQANTSRIVGTYGYMSPE---YAIQG 246
LK +NI L +D KI DFG+A R G ++ + ++ G+ +M+PE
Sbjct: 133 DLKSNNIFLHEDNTVKIGDFGLATVKSRWSGSHQFE----QLSGSILWMAPEVIRMQDSN 188
Query: 247 IFSIKSDVFSFGVLLLEIVSGK 268
+S +SDV++FG++L E+++G+
Sbjct: 189 PYSFQSDVYAFGIVLYELMTGQ 210
>pdb|3LW0|A Chain A, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|B Chain B, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|C Chain C, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|D Chain D, Igf-1rk In Complex With Ligand Msc1609119a-1
Length = 304
Score = 68.2 bits (165), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 76/307 (24%), Positives = 127/307 (41%), Gaps = 54/307 (17%)
Query: 86 TATNKFSDANKLGEGGFGPVYKGVLKK--GDE----IAVKRLPGRSGQGLR-EMKNEASV 138
A K + + +LG+G FG VY+GV K DE +A+K + + R E NEASV
Sbjct: 12 VAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASV 71
Query: 139 IAKVQHKNLVRLLGCCIDKDEKILIYEYMPNKSLDFFLFD-------------PTKRMLL 185
+ + ++VRLLG ++I E M L +L P+ ++
Sbjct: 72 MKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPAMANNPVLAPPSLSKMI 131
Query: 186 DWSANYSS-------------RLKVSNILLDKDINPKISDFGMARICGGNELQANTSRIV 232
+ + L N ++ +D KI DFGM R + + +
Sbjct: 132 QMAGEIADGMAYLNANKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKGGKGL 191
Query: 233 GTYGYMSPEYAIQGIFSIKSDVFSFGVLLLEIVSGKKTTGFYRTDSLTLLGYAWDLWTSN 292
+MSPE G+F+ SDV+SFGV+L EI TL + ++
Sbjct: 192 LPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIA--------------TLAEQPYQGLSNE 237
Query: 293 RTLELI--DPILEDEYSSKHMLLRYVNIALLCVQESADDRPTMNEVVSMLTDEAAALFPP 350
+ L + +L+ + ML + +C Q + RP+ E++S + +E F
Sbjct: 238 QVLRFVMEGGLLDKPDNCPDMLFELMR---MCWQYNPKMRPSFLEIISSIKEEMEPGF-- 292
Query: 351 KQPAFSY 357
++ +F Y
Sbjct: 293 REVSFYY 299
>pdb|2YHV|A Chain A, Structure Of L1196m Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 68.2 bits (165), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 64/207 (30%), Positives = 91/207 (43%), Gaps = 41/207 (19%)
Query: 97 LGEGGFGPVYKGVLKKGD------EIAVKRLPGR-SGQGLREMKNEASVIAKVQHKNLVR 149
LG G FG VY+G + ++AVK LP S Q + EA +I+K H+N+VR
Sbjct: 53 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVR 112
Query: 150 LLGCCIDKDEKILIYEYMPNKSLDFFLFDPTKRMLLDWSANYSSRLKVS----------- 198
+G + + ++ E M L FL + R S L V+
Sbjct: 113 CIGVSLQSLPRFILMELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLE 172
Query: 199 -NILLDKDIN--------------PKISDFGMARICGGNELQANTSRIVGT----YGYMS 239
N + +DI KI DFGMAR + +A+ R G +M
Sbjct: 173 ENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMAR----DIYRASYYRKGGCAMLPVKWMP 228
Query: 240 PEYAIQGIFSIKSDVFSFGVLLLEIVS 266
PE ++GIF+ K+D +SFGVLL EI S
Sbjct: 229 PEAFMEGIFTSKTDTWSFGVLLWEIFS 255
>pdb|2XP2|A Chain A, Structure Of The Human Anaplastic Lymphoma Kinase In
Complex With Crizotinib (Pf-02341066)
Length = 327
Score = 68.2 bits (165), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 64/207 (30%), Positives = 91/207 (43%), Gaps = 41/207 (19%)
Query: 97 LGEGGFGPVYKGVLKKGD------EIAVKRLPGR-SGQGLREMKNEASVIAKVQHKNLVR 149
LG G FG VY+G + ++AVK LP S Q + EA +I+K H+N+VR
Sbjct: 38 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVR 97
Query: 150 LLGCCIDKDEKILIYEYMPNKSLDFFLFDPTKRMLLDWSANYSSRLKVS----------- 198
+G + + ++ E M L FL + R S L V+
Sbjct: 98 CIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLE 157
Query: 199 -NILLDKDIN--------------PKISDFGMARICGGNELQANTSRIVGT----YGYMS 239
N + +DI KI DFGMAR + +A+ R G +M
Sbjct: 158 ENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMAR----DIYRASYYRKGGCAMLPVKWMP 213
Query: 240 PEYAIQGIFSIKSDVFSFGVLLLEIVS 266
PE ++GIF+ K+D +SFGVLL EI S
Sbjct: 214 PEAFMEGIFTSKTDTWSFGVLLWEIFS 240
>pdb|2YFX|A Chain A, Structure Of L1196m Mutant Anaplastic Lymphoma Kinase In
Complex With Crizotinib
Length = 327
Score = 68.2 bits (165), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 64/207 (30%), Positives = 91/207 (43%), Gaps = 41/207 (19%)
Query: 97 LGEGGFGPVYKGVLKKGD------EIAVKRLPGR-SGQGLREMKNEASVIAKVQHKNLVR 149
LG G FG VY+G + ++AVK LP S Q + EA +I+K H+N+VR
Sbjct: 38 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVR 97
Query: 150 LLGCCIDKDEKILIYEYMPNKSLDFFLFDPTKRMLLDWSANYSSRLKVS----------- 198
+G + + ++ E M L FL + R S L V+
Sbjct: 98 CIGVSLQSLPRFILMELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLE 157
Query: 199 -NILLDKDIN--------------PKISDFGMARICGGNELQANTSRIVGT----YGYMS 239
N + +DI KI DFGMAR + +A+ R G +M
Sbjct: 158 ENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMAR----DIYRASYYRKGGCAMLPVKWMP 213
Query: 240 PEYAIQGIFSIKSDVFSFGVLLLEIVS 266
PE ++GIF+ K+D +SFGVLL EI S
Sbjct: 214 PEAFMEGIFTSKTDTWSFGVLLWEIFS 240
>pdb|2XB7|A Chain A, Structure Of Human Anaplastic Lymphoma Kinase In Complex
With Nvp- Tae684
pdb|2XBA|A Chain A, Structure Of Human Anaplastic Lymphoma Kinase In Complex
With Pha-E429
Length = 315
Score = 68.2 bits (165), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 64/207 (30%), Positives = 91/207 (43%), Gaps = 41/207 (19%)
Query: 97 LGEGGFGPVYKGVLKKGD------EIAVKRLPGR-SGQGLREMKNEASVIAKVQHKNLVR 149
LG G FG VY+G + ++AVK LP S Q + EA +I+K H+N+VR
Sbjct: 30 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVR 89
Query: 150 LLGCCIDKDEKILIYEYMPNKSLDFFLFDPTKRMLLDWSANYSSRLKVS----------- 198
+G + + ++ E M L FL + R S L V+
Sbjct: 90 CIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLE 149
Query: 199 -NILLDKDIN--------------PKISDFGMARICGGNELQANTSRIVGT----YGYMS 239
N + +DI KI DFGMAR + +A+ R G +M
Sbjct: 150 ENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMAR----DIYRASYYRKGGCAMLPVKWMP 205
Query: 240 PEYAIQGIFSIKSDVFSFGVLLLEIVS 266
PE ++GIF+ K+D +SFGVLL EI S
Sbjct: 206 PEAFMEGIFTSKTDTWSFGVLLWEIFS 232
>pdb|3L9P|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
Length = 367
Score = 67.8 bits (164), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 64/207 (30%), Positives = 90/207 (43%), Gaps = 41/207 (19%)
Query: 97 LGEGGFGPVYKGVLKKGD------EIAVKRLPGR-SGQGLREMKNEASVIAKVQHKNLVR 149
LG G FG VY+G + ++AVK LP S Q + EA +I+K H+N+VR
Sbjct: 79 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVR 138
Query: 150 LLGCCIDKDEKILIYEYMPNKSLDFFLFDPTKRMLLDWSANYSSRLKVS----------- 198
+G + + ++ E M L FL + R S L V+
Sbjct: 139 CIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLE 198
Query: 199 -NILLDKDIN--------------PKISDFGMARICGGNELQANTSRIVGT----YGYMS 239
N + +DI KI DFGMAR + +A R G +M
Sbjct: 199 ENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMAR----DIYRAGYYRKGGCAMLPVKWMP 254
Query: 240 PEYAIQGIFSIKSDVFSFGVLLLEIVS 266
PE ++GIF+ K+D +SFGVLL EI S
Sbjct: 255 PEAFMEGIFTSKTDTWSFGVLLWEIFS 281
>pdb|4FNX|A Chain A, Crystal Structure Of The Apo R1275q Anaplastic Lymphoma
Kinase Catalytic Domain
pdb|4FNY|A Chain A, Crystal Structure Of The R1275q Anaplastic Lymphoma Kinase
Catalytic Domain In Complex With A Benzoxazole Inhibitor
Length = 327
Score = 67.8 bits (164), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 68/245 (27%), Positives = 105/245 (42%), Gaps = 49/245 (20%)
Query: 67 RSKKKEVDQLPLFSFSSVSTATNKFSDANK--------LGEGGFGPVYKGVLKKGD---- 114
R+ D P +SF+ +++ + + + LG G FG VY+G +
Sbjct: 1 RTSTIMTDYNPNYSFAGKTSSISDLKEVPRKNITLIRGLGHGAFGEVYEGQVSGMPNDPS 60
Query: 115 --EIAVKRLPGR-SGQGLREMKNEASVIAKVQHKNLVRLLGCCIDKDEKILIYEYMPNKS 171
++AVK LP S Q + EA +I+K H+N+VR +G + + ++ E M
Sbjct: 61 PLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVRCIGVSLQSLPRFILLELMAGGD 120
Query: 172 LDFFLFDPTKRMLLDWSANYSSRLKVS------------NILLDKDIN------------ 207
L FL + R S L V+ N + +DI
Sbjct: 121 LKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEENHFIHRDIAARNCLLTCPGPG 180
Query: 208 --PKISDFGMARICGGNELQANTSRIVGT----YGYMSPEYAIQGIFSIKSDVFSFGVLL 261
KI DFGMA+ + +A+ R G +M PE ++GIF+ K+D +SFGVLL
Sbjct: 181 RVAKIGDFGMAQ----DIYRASYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLL 236
Query: 262 LEIVS 266
EI S
Sbjct: 237 WEIFS 241
>pdb|3LCT|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
pdb|3LCS|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
Length = 344
Score = 67.8 bits (164), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 64/207 (30%), Positives = 90/207 (43%), Gaps = 41/207 (19%)
Query: 97 LGEGGFGPVYKGVLKKGD------EIAVKRLPGR-SGQGLREMKNEASVIAKVQHKNLVR 149
LG G FG VY+G + ++AVK LP S Q + EA +I+K H+N+VR
Sbjct: 56 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVR 115
Query: 150 LLGCCIDKDEKILIYEYMPNKSLDFFLFDPTKRMLLDWSANYSSRLKVS----------- 198
+G + + ++ E M L FL + R S L V+
Sbjct: 116 CIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLE 175
Query: 199 -NILLDKDIN--------------PKISDFGMARICGGNELQANTSRIVGT----YGYMS 239
N + +DI KI DFGMAR + +A R G +M
Sbjct: 176 ENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMAR----DIYRAGYYRKGGCAMLPVKWMP 231
Query: 240 PEYAIQGIFSIKSDVFSFGVLLLEIVS 266
PE ++GIF+ K+D +SFGVLL EI S
Sbjct: 232 PEAFMEGIFTSKTDTWSFGVLLWEIFS 258
>pdb|3KUL|B Chain B, Kinase Domain Of Human Ephrin Type-A Receptor 8 (Epha8)
Length = 325
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 59/199 (29%), Positives = 94/199 (47%), Gaps = 35/199 (17%)
Query: 97 LGEGGFGPVYKGVLKKGDE----IAVKRL-PGRSGQGLREMKNEASVIAKVQHKNLVRLL 151
+G G G V G L+ + +A+K L G + + R+ +EAS++ + H N++RL
Sbjct: 57 IGSGDSGEVCYGRLRVPGQRDVPVAIKALKAGYTERQRRDFLSEASIMGQFDHPNIIRLE 116
Query: 152 GCCIDKDEKILIYEYMPNKSLDFFL------------------FDPTKRMLLDWSANYSS 193
G +++ EYM N SLD FL R L D Y
Sbjct: 117 GVVTRGRLAMIVTEYMENGSLDTFLRTHDGQFTIMQLVGMLRGVGAGMRYLSD--LGYVH 174
Query: 194 R-LKVSNILLDKDINPKISDFGMARICGGNELQANTSRIVGTYG-----YMSPEYAIQGI 247
R L N+L+D ++ K+SDFG++R+ + A T+ T G + +PE
Sbjct: 175 RDLAARNVLVDSNLVCKVSDFGLSRVLEDDPDAAXTT----TGGKIPIRWTAPEAIAFRT 230
Query: 248 FSIKSDVFSFGVLLLEIVS 266
FS SDV+SFGV++ E+++
Sbjct: 231 FSSASDVWSFGVVMWEVLA 249
>pdb|4FK3|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx3203
pdb|4FK3|B Chain B, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx3203
Length = 292
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 58/202 (28%), Positives = 99/202 (49%), Gaps = 35/202 (17%)
Query: 94 ANKLGEGGFGPVYKGVLKKGDEIAVKRL--PGRSGQGLREMKNEASVIAKVQHKNLVRLL 151
++G G FG VYKG K ++AVK L + Q L+ KNE V+ K +H N++ +
Sbjct: 29 GQRIGSGSFGTVYKG--KWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFM 86
Query: 152 GCCIDKDEKILIYEYMPNKSLDFFLFDPTKRM----LLDWSANYSSR------------- 194
G K + ++ ++ SL L + L+D A ++R
Sbjct: 87 GYST-KPQLAIVTQWCEGSSLYHHLHASETKFEMKKLID-IARQTARGMDYLHAKSIIHR 144
Query: 195 -LKVSNILLDKDINPKISDFGMA----RICGGNELQANTSRIVGTYGYMSPE---YAIQG 246
LK +NI L +D KI DFG+A R G ++ + ++ G+ +M+PE
Sbjct: 145 DLKSNNIFLHEDNTVKIGDFGLATEKSRWSGSHQFE----QLSGSILWMAPEVIRMQDSN 200
Query: 247 IFSIKSDVFSFGVLLLEIVSGK 268
+S +SDV++FG++L E+++G+
Sbjct: 201 PYSFQSDVYAFGIVLYELMTGQ 222
>pdb|1UWH|A Chain A, The Complex Of Wild Type B-Raf And Bay439006
pdb|1UWH|B Chain B, The Complex Of Wild Type B-Raf And Bay439006
Length = 276
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 54/196 (27%), Positives = 93/196 (47%), Gaps = 23/196 (11%)
Query: 94 ANKLGEGGFGPVYKGVLKKGDEIAVKRL--PGRSGQGLREMKNEASVIAKVQHKNLVRLL 151
++G G FG VYKG K ++AVK L + Q L+ KNE V+ K +H N++ +
Sbjct: 13 GQRIGSGSFGTVYKG--KWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFM 70
Query: 152 GCCIDKDEKIL--------IYEYMPNKSLDFF---LFDPTKRM-----LLDWSANYSSRL 195
G I+ +Y ++ F L D ++ L + L
Sbjct: 71 GYSTAPQLAIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGMDYLHAKSIIHRDL 130
Query: 196 KVSNILLDKDINPKISDFGMARICGGNELQANTSRIVGTYGYMSPE---YAIQGIFSIKS 252
K +NI L +D+ KI DFG+A + ++ G+ +M+PE + +S +S
Sbjct: 131 KSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPYSFQS 190
Query: 253 DVFSFGVLLLEIVSGK 268
DV++FG++L E+++G+
Sbjct: 191 DVYAFGIVLYELMTGQ 206
>pdb|3KUL|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 8 (Epha8)
Length = 325
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 59/199 (29%), Positives = 94/199 (47%), Gaps = 35/199 (17%)
Query: 97 LGEGGFGPVYKGVLKKGDE----IAVKRL-PGRSGQGLREMKNEASVIAKVQHKNLVRLL 151
+G G G V G L+ + +A+K L G + + R+ +EAS++ + H N++RL
Sbjct: 57 IGSGDSGEVCYGRLRVPGQRDVPVAIKALKAGYTERQRRDFLSEASIMGQFDHPNIIRLE 116
Query: 152 GCCIDKDEKILIYEYMPNKSLDFFL------------------FDPTKRMLLDWSANYSS 193
G +++ EYM N SLD FL R L D Y
Sbjct: 117 GVVTRGRLAMIVTEYMENGSLDTFLRTHDGQFTIMQLVGMLRGVGAGMRYLSD--LGYVH 174
Query: 194 R-LKVSNILLDKDINPKISDFGMARICGGNELQANTSRIVGTYG-----YMSPEYAIQGI 247
R L N+L+D ++ K+SDFG++R+ + A T+ T G + +PE
Sbjct: 175 RDLAARNVLVDSNLVCKVSDFGLSRVLEDDPDAAYTT----TGGKIPIRWTAPEAIAFRT 230
Query: 248 FSIKSDVFSFGVLLLEIVS 266
FS SDV+SFGV++ E+++
Sbjct: 231 FSSASDVWSFGVVMWEVLA 249
>pdb|3LXN|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
pdb|3LXP|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
Length = 318
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 75/276 (27%), Positives = 117/276 (42%), Gaps = 41/276 (14%)
Query: 97 LGEGGFG--------PVYKGVLKKGDEIAVKRLPGRSGQGLRE-MKNEASVIAKVQHKNL 147
LGEG FG P G G+ +AVK L +G R K E ++ + H+++
Sbjct: 39 LGEGHFGKVSLYCYDPTNDGT---GEMVAVKALKADAGPQHRSGWKQEIDILRTLYHEHI 95
Query: 148 VRLLGCCIDKDEK--ILIYEYMPNKSLD--------------FFLFDPTKRMLLDWSANY 191
++ GCC D L+ EY+P SL F + M + +Y
Sbjct: 96 IKYKGCCEDAGAASLQLVMEYVPLGSLRDYLPRHSIGLAQLLLFAQQICEGMAYLHAQHY 155
Query: 192 SSR-LKVSNILLDKDINPKISDFGMAR-ICGGNELQANTSRIVGTYGYMSPEYAIQGIFS 249
R L N+LLD D KI DFG+A+ + G+E + +PE + F
Sbjct: 156 IHRDLAARNVLLDNDRLVKIGDFGLAKAVPEGHEXYRVREDGDSPVFWYAPECLKEYKFY 215
Query: 250 IKSDVFSFGVLLLEIVSGKKTTGFYRTDSLTLLGYAWDLWTSNRTLELID-----PILED 304
SDV+SFGV L E+++ ++ T L L+G A T R EL++ P +
Sbjct: 216 YASDVWSFGVTLYELLTHCDSSQSPPTKFLELIGIAQGQMTVLRLTELLERGERLPRPDK 275
Query: 305 EYSSKHMLLRYVNIALLCVQESADDRPTMNEVVSML 340
+ + L++ C + A RPT ++ +L
Sbjct: 276 CPAEVYHLMKN------CWETEASFRPTFENLIPIL 305
>pdb|3COM|A Chain A, Crystal Structure Of Mst1 Kinase
pdb|3COM|B Chain B, Crystal Structure Of Mst1 Kinase
Length = 314
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 52/196 (26%), Positives = 97/196 (49%), Gaps = 22/196 (11%)
Query: 91 FSDANKLGEGGFGPVYKGVLKK-GDEIAVKRLPGRSGQGLREMKNEASVIAKVQHKNLVR 149
F KLGEG +G VYK + K+ G +A+K++P S L+E+ E S++ + ++V+
Sbjct: 31 FDVLEKLGEGSYGSVYKAIHKETGQIVAIKQVPVESD--LQEIIKEISIMQQCDSPHVVK 88
Query: 150 LLGCCIDKDEKILIYEY-----------MPNKSLD----FFLFDPTKRML--LDWSANYS 192
G + ++ EY + NK+L + T + L L +
Sbjct: 89 YYGSYFKNTDLWIVMEYCGAGSVSDIIRLRNKTLTEDEIATILQSTLKGLEYLHFMRKIH 148
Query: 193 SRLKVSNILLDKDINPKISDFGMARICGGNELQANTSRIVGTYGYMSPEYAIQGIFSIKS 252
+K NILL+ + + K++DFG+A + A + ++GT +M+PE + ++ +
Sbjct: 149 RDIKAGNILLNTEGHAKLADFGVAGQL--TDXMAKRNXVIGTPFWMAPEVIQEIGYNCVA 206
Query: 253 DVFSFGVLLLEIVSGK 268
D++S G+ +E+ GK
Sbjct: 207 DIWSLGITAIEMAEGK 222
>pdb|3OG7|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx4032
pdb|3OG7|B Chain B, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx4032
Length = 289
Score = 65.9 bits (159), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 56/200 (28%), Positives = 95/200 (47%), Gaps = 31/200 (15%)
Query: 94 ANKLGEGGFGPVYKGVLKKGDEIAVKRL--PGRSGQGLREMKNEASVIAKVQHKNLVRLL 151
++G G FG VYKG K ++AVK L + Q L+ KNE V+ K +H N++ +
Sbjct: 29 GQRIGSGSFGTVYKG--KWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFM 86
Query: 152 GCCIDKDEKIL--------IYEYMPNKSLDFF---LFDPTKRM-----LLDWSANYSSRL 195
G I+ +Y ++ F L D ++ L + L
Sbjct: 87 GYSTAPQLAIVTQWCEGSSLYHHLHASETKFEMKKLIDIARQTARGMDYLHAKSIIHRDL 146
Query: 196 KVSNILLDKDINPKISDFGMA----RICGGNELQANTSRIVGTYGYMSPE---YAIQGIF 248
K +NI L +D KI DFG+A R G ++ + ++ G+ +M+PE +
Sbjct: 147 KSNNIFLHEDNTVKIGDFGLATEKSRWSGSHQFE----QLSGSILWMAPEVIRMQDSNPY 202
Query: 249 SIKSDVFSFGVLLLEIVSGK 268
S +SDV++FG++L E+++G+
Sbjct: 203 SFQSDVYAFGIVLYELMTGQ 222
>pdb|3OMV|A Chain A, Crystal Structure Of C-Raf (Raf-1)
pdb|3OMV|B Chain B, Crystal Structure Of C-Raf (Raf-1)
Length = 307
Score = 65.9 bits (159), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 52/199 (26%), Positives = 99/199 (49%), Gaps = 29/199 (14%)
Query: 94 ANKLGEGGFGPVYKGVLKKGDEIAVKRLPGRSGQGLREMKNEASVIAKVQHKNLVRLLGC 153
+ ++G G FG VYKG + + ++ + + + +NE +V+ K +H N++ +G
Sbjct: 41 STRIGSGSFGTVYKGKWHGDVAVKILKVVDPTPEQFQAFRNEVAVLRKTRHVNILLFMG- 99
Query: 154 CIDKDEKILIYEYMPNKSLD------------FFLFDPTKRML--LDW--SANYSSR-LK 196
+ KD ++ ++ SL F L D ++ +D+ + N R +K
Sbjct: 100 YMTKDNLAIVTQWCEGSSLYKHLHVQETKFQMFQLIDIARQTAQGMDYLHAKNIIHRDMK 159
Query: 197 VSNILLDKDINPKISDFGMA----RICGGNELQANTSRIVGTYGYMSPE---YAIQGIFS 249
+NI L + + KI DFG+A R G +++ T G+ +M+PE FS
Sbjct: 160 SNNIFLHEGLTVKIGDFGLATVKSRWSGSQQVEQPT----GSVLWMAPEVIRMQDNNPFS 215
Query: 250 IKSDVFSFGVLLLEIVSGK 268
+SDV+S+G++L E+++G+
Sbjct: 216 FQSDVYSYGIVLYELMTGE 234
>pdb|1R0P|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
The Microbial Alkaloid K-252a
pdb|1R1W|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met
Length = 312
Score = 65.5 bits (158), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 71/273 (26%), Positives = 119/273 (43%), Gaps = 46/273 (16%)
Query: 97 LGEGGFGPVYKGVLKKGD----EIAVKRLPGRSGQG-LREMKNEASVIAKVQHKNLVRLL 151
+G G FG VY G L D AVK L + G + + E ++ H N++ LL
Sbjct: 36 IGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLL 95
Query: 152 GCCIDKD-EKILIYEYMPNKSLDFFL----FDPTKRMLLDW------------SANYSSR 194
G C+ + +++ YM + L F+ +PT + L+ + S + R
Sbjct: 96 GICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKFLASKKFVHR 155
Query: 195 -LKVSNILLDKDINPKISDFGMARICGGNELQA--NTSRIVGTYGYMSPEYAIQGIFSIK 251
L N +LD+ K++DFG+AR E + N + +M+ E F+ K
Sbjct: 156 DLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMALESLQTQKFTTK 215
Query: 252 SDVFSFGVLLLEIVSGKKTTGFYRTDSLTLLGYAWDLWTSNRTLE---LIDPILEDEYSS 308
SDV+SFGVLL E+++ + + ++ + Y L R L+ DP+ E
Sbjct: 216 SDVWSFGVLLWELMT-RGAPPYPDVNTFDITVY---LLQGRRLLQPEYCPDPLYE----- 266
Query: 309 KHMLLRYVNIALLCVQESADDRPTMNEVVSMLT 341
+ L C A+ RP+ +E+VS ++
Sbjct: 267 ---------VMLKCWHPKAEMRPSFSELVSRIS 290
>pdb|3COK|A Chain A, Crystal Structure Of Plk4 Kinase
pdb|3COK|B Chain B, Crystal Structure Of Plk4 Kinase
Length = 278
Score = 65.5 bits (158), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 53/199 (26%), Positives = 95/199 (47%), Gaps = 23/199 (11%)
Query: 91 FSDANKLGEGGFGPVYKG-VLKKGDEIAVKRLPGRS---GQGLREMKNEASVIAKVQHKN 146
F N LG+G F VY+ + G E+A+K + ++ ++ ++NE + +++H +
Sbjct: 13 FKVGNLLGKGSFAGVYRAESIHTGLEVAIKMIDKKAMYKAGMVQRVQNEVKIHCQLKHPS 72
Query: 147 LVRLLGCCIDKDEKILIYE---------YMPNKSLDF-------FLFDPTKRMLLDWSAN 190
++ L D + L+ E Y+ N+ F F+ ML S
Sbjct: 73 ILELYNYFEDSNYVYLVLEMCHNGEMNRYLKNRVKPFSENEARHFMHQIITGMLYLHSHG 132
Query: 191 YSSR-LKVSNILLDKDINPKISDFGMARICGGNELQANTSRIVGTYGYMSPEYAIQGIFS 249
R L +SN+LL +++N KI+DFG+A + T + GT Y+SPE A +
Sbjct: 133 ILHRDLTLSNLLLTRNMNIKIADFGLATQLKMPHEKHYT--LCGTPNYISPEIATRSAHG 190
Query: 250 IKSDVFSFGVLLLEIVSGK 268
++SDV+S G + ++ G+
Sbjct: 191 LESDVWSLGCMFYTLLIGR 209
>pdb|3CTH|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Aminopyridine Based Inhibitor
pdb|3CTJ|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Aminopyridine Based Inhibitor
pdb|3CE3|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Pyrrolopyridinepyridone Based Inhibitor
pdb|3F82|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
N-
(4-(2-Amino-3-Chloropyridin-4-Yloxy)-3-Fluorophenyl)-4-
Ethoxy-1-(4-Fluorophenyl)-2-Oxo-1,2-Dihydropyridine-3-
Carboxamide
pdb|3L8V|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepat Growth Factor Receptor C-Met In Complex With A
Biarylamine Inhibitor
Length = 314
Score = 65.5 bits (158), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 69/273 (25%), Positives = 118/273 (43%), Gaps = 46/273 (16%)
Query: 97 LGEGGFGPVYKGVLKKGD----EIAVKRLPGRSGQG-LREMKNEASVIAKVQHKNLVRLL 151
+G G FG VY G L D AVK L + G + + E ++ H N++ LL
Sbjct: 38 IGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLL 97
Query: 152 GCCIDKD-EKILIYEYMPNKSLDFFL----FDPTKRMLLDWSANYSSRLK---------- 196
G C+ + +++ YM + L F+ +PT + L+ + + +K
Sbjct: 98 GICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKFLASKKFVHR 157
Query: 197 ---VSNILLDKDINPKISDFGMARICGGNELQA--NTSRIVGTYGYMSPEYAIQGIFSIK 251
N +LD+ K++DFG+AR E + N + +M+ E F+ K
Sbjct: 158 DLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMALESLQTQKFTTK 217
Query: 252 SDVFSFGVLLLEIVSGKKTTGFYRTDSLTLLGYAWDLWTSNRTLE---LIDPILEDEYSS 308
SDV+SFGVLL E+++ + + ++ + Y L R L+ DP+ E
Sbjct: 218 SDVWSFGVLLWELMT-RGAPPYPDVNTFDITVY---LLQGRRLLQPEYCPDPLYE----- 268
Query: 309 KHMLLRYVNIALLCVQESADDRPTMNEVVSMLT 341
+ L C A+ RP+ +E+VS ++
Sbjct: 269 ---------VMLKCWHPKAEMRPSFSELVSRIS 292
>pdb|3C1X|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Pyrrolotriazine Based Inhibitor
Length = 373
Score = 65.5 bits (158), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 68/270 (25%), Positives = 118/270 (43%), Gaps = 40/270 (14%)
Query: 97 LGEGGFGPVYKGVLKKGD----EIAVKRLPGRSGQG-LREMKNEASVIAKVQHKNLVRLL 151
+G G FG VY G L D AVK L + G + + E ++ H N++ LL
Sbjct: 97 IGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLL 156
Query: 152 GCCIDKD-EKILIYEYMPNKSLDFFL----FDPTKRMLLDWSANYSSRLK---------- 196
G C+ + +++ YM + L F+ +PT + L+ + + +K
Sbjct: 157 GICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKFLASKKFVHR 216
Query: 197 ---VSNILLDKDINPKISDFGMARICGGNELQA--NTSRIVGTYGYMSPEYAIQGIFSIK 251
N +LD+ K++DFG+AR E + N + +M+ E F+ K
Sbjct: 217 DLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMALESLQTQKFTTK 276
Query: 252 SDVFSFGVLLLEIVSGKKTTGFYRTDSLTLLGYAWDLWTSNRTLELIDPILEDEYSSKHM 311
SDV+SFGVLL E+++ + + ++ + Y L R +L+ EY +
Sbjct: 277 SDVWSFGVLLWELMT-RGAPPYPDVNTFDITVY---LLQGRR-------LLQPEYCPDPL 325
Query: 312 LLRYVNIALLCVQESADDRPTMNEVVSMLT 341
+ L C A+ RP+ +E+VS ++
Sbjct: 326 Y----EVMLKCWHPKAEMRPSFSELVSRIS 351
>pdb|3A4P|A Chain A, Human C-Met Kinase Domain Complexed With
6-Benzyloxyquinoline Inhibitor
Length = 319
Score = 65.5 bits (158), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 69/273 (25%), Positives = 118/273 (43%), Gaps = 46/273 (16%)
Query: 97 LGEGGFGPVYKGVLKKGD----EIAVKRLPGRSGQG-LREMKNEASVIAKVQHKNLVRLL 151
+G G FG VY G L D AVK L + G + + E ++ H N++ LL
Sbjct: 43 IGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLL 102
Query: 152 GCCIDKD-EKILIYEYMPNKSLDFFL----FDPTKRMLLDWSANYSSRLK---------- 196
G C+ + +++ YM + L F+ +PT + L+ + + +K
Sbjct: 103 GICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKFLASKKFVHR 162
Query: 197 ---VSNILLDKDINPKISDFGMARICGGNELQA--NTSRIVGTYGYMSPEYAIQGIFSIK 251
N +LD+ K++DFG+AR E + N + +M+ E F+ K
Sbjct: 163 DLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMALESLQTQKFTTK 222
Query: 252 SDVFSFGVLLLEIVSGKKTTGFYRTDSLTLLGYAWDLWTSNRTLE---LIDPILEDEYSS 308
SDV+SFGVLL E+++ + + ++ + Y L R L+ DP+ E
Sbjct: 223 SDVWSFGVLLWELMT-RGAPPYPDVNTFDITVY---LLQGRRLLQPEYCPDPLYE----- 273
Query: 309 KHMLLRYVNIALLCVQESADDRPTMNEVVSMLT 341
+ L C A+ RP+ +E+VS ++
Sbjct: 274 ---------VMLKCWHPKAEMRPSFSELVSRIS 297
>pdb|3QTI|A Chain A, C-Met Kinase In Complex With Nvp-Bvu972
pdb|3QTI|B Chain B, C-Met Kinase In Complex With Nvp-Bvu972
Length = 314
Score = 65.5 bits (158), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 69/273 (25%), Positives = 118/273 (43%), Gaps = 46/273 (16%)
Query: 97 LGEGGFGPVYKGVLKKGD----EIAVKRLPGRSGQG-LREMKNEASVIAKVQHKNLVRLL 151
+G G FG VY G L D AVK L + G + + E ++ H N++ LL
Sbjct: 38 IGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLL 97
Query: 152 GCCIDKD-EKILIYEYMPNKSLDFFL----FDPTKRMLLDWSANYSSRLK---------- 196
G C+ + +++ YM + L F+ +PT + L+ + + +K
Sbjct: 98 GICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKFLASKKFVHR 157
Query: 197 ---VSNILLDKDINPKISDFGMARICGGNELQA--NTSRIVGTYGYMSPEYAIQGIFSIK 251
N +LD+ K++DFG+AR E + N + +M+ E F+ K
Sbjct: 158 DLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMALESLQTQKFTTK 217
Query: 252 SDVFSFGVLLLEIVSGKKTTGFYRTDSLTLLGYAWDLWTSNRTLE---LIDPILEDEYSS 308
SDV+SFGVLL E+++ + + ++ + Y L R L+ DP+ E
Sbjct: 218 SDVWSFGVLLWELMT-RGAPPYPDVNTFDITVY---LLQGRRLLQPEYCPDPLYE----- 268
Query: 309 KHMLLRYVNIALLCVQESADDRPTMNEVVSMLT 341
+ L C A+ RP+ +E+VS ++
Sbjct: 269 ---------VMLKCWHPKAEMRPSFSELVSRIS 292
>pdb|3DKC|A Chain A, Sgx Clone 5698a65kfg1h1
pdb|3DKF|A Chain A, Sgx Clone 5698a65kfg1h1
Length = 317
Score = 65.5 bits (158), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 69/273 (25%), Positives = 118/273 (43%), Gaps = 46/273 (16%)
Query: 97 LGEGGFGPVYKGVLKKGD----EIAVKRLPGRSGQG-LREMKNEASVIAKVQHKNLVRLL 151
+G G FG VY G L D AVK L + G + + E ++ H N++ LL
Sbjct: 39 IGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLL 98
Query: 152 GCCIDKD-EKILIYEYMPNKSLDFFL----FDPTKRMLLDWSANYSSRLK---------- 196
G C+ + +++ YM + L F+ +PT + L+ + + +K
Sbjct: 99 GICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKFLASKKFVHR 158
Query: 197 ---VSNILLDKDINPKISDFGMARICGGNELQA--NTSRIVGTYGYMSPEYAIQGIFSIK 251
N +LD+ K++DFG+AR E + N + +M+ E F+ K
Sbjct: 159 DLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMALESLQTQKFTTK 218
Query: 252 SDVFSFGVLLLEIVSGKKTTGFYRTDSLTLLGYAWDLWTSNRTLE---LIDPILEDEYSS 308
SDV+SFGVLL E+++ + + ++ + Y L R L+ DP+ E
Sbjct: 219 SDVWSFGVLLWELMT-RGAPPYPDVNTFDITVY---LLQGRRLLQPEYCPDPLYE----- 269
Query: 309 KHMLLRYVNIALLCVQESADDRPTMNEVVSMLT 341
+ L C A+ RP+ +E+VS ++
Sbjct: 270 ---------VMLKCWHPKAEMRPSFSELVSRIS 293
>pdb|3DKG|A Chain A, Sgx Clone 5698a109kfg1h1
Length = 317
Score = 65.1 bits (157), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 69/273 (25%), Positives = 118/273 (43%), Gaps = 46/273 (16%)
Query: 97 LGEGGFGPVYKGVLKKGD----EIAVKRLPGRSGQG-LREMKNEASVIAKVQHKNLVRLL 151
+G G FG VY G L D AVK L + G + + E ++ H N++ LL
Sbjct: 39 IGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLL 98
Query: 152 GCCIDKD-EKILIYEYMPNKSLDFFL----FDPTKRMLLDWSANYSSRLK---------- 196
G C+ + +++ YM + L F+ +PT + L+ + + +K
Sbjct: 99 GICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKFLASKKFVHR 158
Query: 197 ---VSNILLDKDINPKISDFGMARICGGNELQA--NTSRIVGTYGYMSPEYAIQGIFSIK 251
N +LD+ K++DFG+AR E + N + +M+ E F+ K
Sbjct: 159 DLAARNCMLDEKFTVKVADFGLARDMLDKEFDSVHNKTGAKLPVKWMALESLQTQKFTTK 218
Query: 252 SDVFSFGVLLLEIVSGKKTTGFYRTDSLTLLGYAWDLWTSNRTLE---LIDPILEDEYSS 308
SDV+SFGVLL E+++ + + ++ + Y L R L+ DP+ E
Sbjct: 219 SDVWSFGVLLWELMT-RGAPPYPDVNTFDITVY---LLQGRRLLQPEYCPDPLYE----- 269
Query: 309 KHMLLRYVNIALLCVQESADDRPTMNEVVSMLT 341
+ L C A+ RP+ +E+VS ++
Sbjct: 270 ---------VMLKCWHPKAEMRPSFSELVSRIS 293
>pdb|2REI|A Chain A, Kinase Domain Of Human Ephrin Type-a Receptor 7 (epha7)
pdb|3DKO|A Chain A, Complex Between The Kinase Domain Of Human Ephrin Type-A
Receptor 7 (Epha7) And Inhibitor Alw-Ii-49-7
Length = 318
Score = 65.1 bits (157), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 70/280 (25%), Positives = 123/280 (43%), Gaps = 64/280 (22%)
Query: 97 LGEGGFGPVYKGVLK----KGDEIAVKRLP-GRSGQGLREMKNEASVIAKVQHKNLVRLL 151
+G G FG V G LK + +A+K L G + + R+ EAS++ + H N+V L
Sbjct: 51 IGAGEFGEVCSGRLKLPGKRDVAVAIKTLKVGYTEKQRRDFLCEASIMGQFDHPNVVHLE 110
Query: 152 GCCIDKDEKILIYEYMPNKSLDFFL------------------FDPTKRMLLDWSANYSS 193
G +++ E+M N +LD FL R L D Y
Sbjct: 111 GVVTRGKPVMIVIEFMENGALDAFLRKHDGQFTVIQLVGMLRGIAAGMRYLAD--MGYVH 168
Query: 194 R-LKVSNILLDKDINPKISDFGMARICGGNELQANTSRIVGTYG------YMSPEYAIQG 246
R L NIL++ ++ K+SDFG++R+ ++ + + T G + +PE
Sbjct: 169 RDLAARNILVNSNLVCKVSDFGLSRV-----IEDDPEAVYTTTGGKIPVRWTAPEAIQYR 223
Query: 247 IFSIKSDVFSFGVLLLEIVS-GKKTTGFYRTDSLTLLGYAWDLWTSNRTLELID-----P 300
F+ SDV+S+G+++ E++S G++ WD+ ++ ++ I+ P
Sbjct: 224 KFTSASDVWSYGIVMWEVMSYGERPY--------------WDM-SNQDVIKAIEEGYRLP 268
Query: 301 ILEDEYSSKHMLLRYVNIALLCVQESADDRPTMNEVVSML 340
D + H L+ L C Q+ +RP ++V +L
Sbjct: 269 APMDCPAGLHQLM------LDCWQKERAERPKFEQIVGIL 302
>pdb|1YHV|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Two Point
Mutations (K299r, T423e)
pdb|2HY8|1 Chain 1, Pak1 Complex With St2001
Length = 297
Score = 64.7 bits (156), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 54/208 (25%), Positives = 101/208 (48%), Gaps = 20/208 (9%)
Query: 78 LFSFSSVSTATNKFSDANKLGEGGFGPVYKGV-LKKGDEIAVKRLPGRSGQGLREMKNEA 136
L S SV K++ K+G+G G VY + + G E+A++++ + + NE
Sbjct: 9 LRSIVSVGDPKKKYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEI 68
Query: 137 SVIAKVQHKNLVRLLGCCIDKDEKILIYEYMPNKSLDFFLFDP----------TKRMLLD 186
V+ + ++ N+V L + DE ++ EY+ SL + + + L
Sbjct: 69 LVMRENKNPNIVNYLDSYLVGDELWVVMEYLAGGSLTDVVTETCMDEGQIAAVCRECLQA 128
Query: 187 WSANYSSR-----LKVSNILLDKDINPKISDFGM-ARICGGNELQANTSRIVGTYGYMSP 240
+S++ +K NILL D + K++DFG A+I Q+ S +VGT +M+P
Sbjct: 129 LEFLHSNQVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPE---QSKRSEMVGTPYWMAP 185
Query: 241 EYAIQGIFSIKSDVFSFGVLLLEIVSGK 268
E + + K D++S G++ +E++ G+
Sbjct: 186 EVVTRKAYGPKVDIWSLGIMAIEMIEGE 213
>pdb|3Q6W|A Chain A, Structure Of Dually-phosphorylated Met Receptor Kinase In
Complex With An Mk-2461 Analog With Specificity For The
Activated Receptor
pdb|3R7O|A Chain A, Structure Of Dually Phosphorylated C-Met Receptor Kinase
In Complex With An Mk-2461 Analog
Length = 307
Score = 64.7 bits (156), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 68/270 (25%), Positives = 118/270 (43%), Gaps = 40/270 (14%)
Query: 97 LGEGGFGPVYKGVLKKGD----EIAVKRLPGRSGQG-LREMKNEASVIAKVQHKNLVRLL 151
+G G FG VY G L D AVK L + G + + E ++ H N++ LL
Sbjct: 37 IGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLL 96
Query: 152 GCCIDKD-EKILIYEYMPNKSLDFFL----FDPTKRMLLDWSANYSSRLK---------- 196
G C+ + +++ YM + L F+ +PT + L+ + + +K
Sbjct: 97 GICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKYLASKKFVHR 156
Query: 197 ---VSNILLDKDINPKISDFGMARICGGNELQA--NTSRIVGTYGYMSPEYAIQGIFSIK 251
N +LD+ K++DFG+AR E + N + +M+ E F+ K
Sbjct: 157 DLAARNCMLDEKFTVKVADFGLARDMYDKEXXSVHNKTGAKLPVKWMALESLQTQKFTTK 216
Query: 252 SDVFSFGVLLLEIVSGKKTTGFYRTDSLTLLGYAWDLWTSNRTLELIDPILEDEYSSKHM 311
SDV+SFGVLL E+++ + + ++ + Y L R +L+ EY +
Sbjct: 217 SDVWSFGVLLWELMT-RGAPPYPDVNTFDITVY---LLQGRR-------LLQPEYCPDPL 265
Query: 312 LLRYVNIALLCVQESADDRPTMNEVVSMLT 341
+ L C A+ RP+ +E+VS ++
Sbjct: 266 Y----EVMLKCWHPKAEMRPSFSELVSRIS 291
>pdb|3I5N|A Chain A, Crystal Structure Of C-Met With Triazolopyridazine
Inhibitor 13
pdb|3U6H|A Chain A, Crystal Structure Of C-Met In Complex With Pyrazolone
Inhibitor 26
pdb|3U6I|A Chain A, Crystal Structure Of C-Met In Complex With Pyrazolone
Inhibitor 58a
pdb|4DEG|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridazine Inhibitor 2
pdb|4DEH|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridinone Inhibitor 3
pdb|4DEI|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridinone Inhibitor 24
Length = 309
Score = 64.7 bits (156), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 71/273 (26%), Positives = 119/273 (43%), Gaps = 46/273 (16%)
Query: 97 LGEGGFGPVYKGVLKKGD----EIAVKRLPGRSGQG-LREMKNEASVIAKVQHKNLVRLL 151
+G G FG VY G L D AVK L + G + + E ++ H N++ LL
Sbjct: 37 IGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLL 96
Query: 152 GCCIDKD-EKILIYEYMPNKSLDFFL----FDPTKRMLLDW------------SANYSSR 194
G C+ + +++ YM + L F+ +PT + L+ + S + R
Sbjct: 97 GICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKYLASKKFVHR 156
Query: 195 -LKVSNILLDKDINPKISDFGMARICGGNELQA--NTSRIVGTYGYMSPEYAIQGIFSIK 251
L N +LD+ K++DFG+AR E + N + +M+ E F+ K
Sbjct: 157 DLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESLQTQKFTTK 216
Query: 252 SDVFSFGVLLLEIVSGKKTTGFYRTDSLTLLGYAWDLWTSNRTLE---LIDPILEDEYSS 308
SDV+SFGVLL E+++ + + ++ + Y L R L+ DP+ E
Sbjct: 217 SDVWSFGVLLWELMT-RGAPPYPDVNTFDITVY---LLQGRRLLQPEYCPDPLYE----- 267
Query: 309 KHMLLRYVNIALLCVQESADDRPTMNEVVSMLT 341
+ L C A+ RP+ +E+VS ++
Sbjct: 268 ---------VMLKCWHPKAEMRPSFSELVSRIS 291
>pdb|2RFN|A Chain A, X-ray Structure Of C-met With Inhibitor.
pdb|2RFN|B Chain B, X-ray Structure Of C-met With Inhibitor.
pdb|2RFS|A Chain A, X-Ray Structure Of Su11274 Bound To C-Met
pdb|3CCN|A Chain A, X-Ray Structure Of C-Met With Triazolopyridazine
Inhibitor.
pdb|3CD8|A Chain A, X-Ray Structure Of C-Met With Triazolopyridazine
Inhibitor.
pdb|3EFJ|A Chain A, Structure Of C-Met With Pyrimidone Inhibitor 7
pdb|3EFJ|B Chain B, Structure Of C-Met With Pyrimidone Inhibitor 7
pdb|3EFK|A Chain A, Structure Of C-Met With Pyrimidone Inhibitor 50
pdb|3EFK|B Chain B, Structure Of C-Met With Pyrimidone Inhibitor 50
Length = 310
Score = 64.7 bits (156), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 71/273 (26%), Positives = 119/273 (43%), Gaps = 46/273 (16%)
Query: 97 LGEGGFGPVYKGVLKKGD----EIAVKRLPGRSGQG-LREMKNEASVIAKVQHKNLVRLL 151
+G G FG VY G L D AVK L + G + + E ++ H N++ LL
Sbjct: 38 IGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLL 97
Query: 152 GCCIDKD-EKILIYEYMPNKSLDFFL----FDPTKRMLLDW------------SANYSSR 194
G C+ + +++ YM + L F+ +PT + L+ + S + R
Sbjct: 98 GICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKYLASKKFVHR 157
Query: 195 -LKVSNILLDKDINPKISDFGMARICGGNELQA--NTSRIVGTYGYMSPEYAIQGIFSIK 251
L N +LD+ K++DFG+AR E + N + +M+ E F+ K
Sbjct: 158 DLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESLQTQKFTTK 217
Query: 252 SDVFSFGVLLLEIVSGKKTTGFYRTDSLTLLGYAWDLWTSNRTLE---LIDPILEDEYSS 308
SDV+SFGVLL E+++ + + ++ + Y L R L+ DP+ E
Sbjct: 218 SDVWSFGVLLWELMT-RGAPPYPDVNTFDITVY---LLQGRRLLQPEYCPDPLYE----- 268
Query: 309 KHMLLRYVNIALLCVQESADDRPTMNEVVSMLT 341
+ L C A+ RP+ +E+VS ++
Sbjct: 269 ---------VMLKCWHPKAEMRPSFSELVSRIS 292
>pdb|2WD1|A Chain A, Human C-Met Kinase In Complex With Azaindole Inhibitor
Length = 292
Score = 64.7 bits (156), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 68/270 (25%), Positives = 118/270 (43%), Gaps = 40/270 (14%)
Query: 97 LGEGGFGPVYKGVLKKGD----EIAVKRLPGRSGQG-LREMKNEASVIAKVQHKNLVRLL 151
+G G FG VY G L D AVK L + G + + E ++ H N++ LL
Sbjct: 30 IGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLL 89
Query: 152 GCCIDKD-EKILIYEYMPNKSLDFFL----FDPTKRMLLDWSANYSSRLK---------- 196
G C+ + +++ YM + L F+ +PT + L+ + + +K
Sbjct: 90 GICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKYLASKKFVHR 149
Query: 197 ---VSNILLDKDINPKISDFGMARICGGNELQA--NTSRIVGTYGYMSPEYAIQGIFSIK 251
N +LD+ K++DFG+AR E + N + +M+ E F+ K
Sbjct: 150 DLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESLQTQKFTTK 209
Query: 252 SDVFSFGVLLLEIVSGKKTTGFYRTDSLTLLGYAWDLWTSNRTLELIDPILEDEYSSKHM 311
SDV+SFGVLL E+++ + + ++ + Y L R +L+ EY +
Sbjct: 210 SDVWSFGVLLWELMT-RGAPPYPDVNTFDITVY---LLQGRR-------LLQPEYCPDPL 258
Query: 312 LLRYVNIALLCVQESADDRPTMNEVVSMLT 341
+ L C A+ RP+ +E+VS ++
Sbjct: 259 Y----EVMLKCWHPKAEMRPSFSELVSRIS 284
>pdb|4GG5|A Chain A, Crystal Structure Of Cmet In Complex With Novel Inhibitor
pdb|4GG7|A Chain A, Crystal Structure Of Cmet In Complex With Novel Inhibitor
Length = 319
Score = 64.7 bits (156), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 68/270 (25%), Positives = 118/270 (43%), Gaps = 40/270 (14%)
Query: 97 LGEGGFGPVYKGVLKKGD----EIAVKRLPGRSGQG-LREMKNEASVIAKVQHKNLVRLL 151
+G G FG VY G L D AVK L + G + + E ++ H N++ LL
Sbjct: 57 IGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLL 116
Query: 152 GCCIDKD-EKILIYEYMPNKSLDFFL----FDPTKRMLLDWSANYSSRLK---------- 196
G C+ + +++ YM + L F+ +PT + L+ + + +K
Sbjct: 117 GICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKYLASKKFVHR 176
Query: 197 ---VSNILLDKDINPKISDFGMARICGGNELQA--NTSRIVGTYGYMSPEYAIQGIFSIK 251
N +LD+ K++DFG+AR E + N + +M+ E F+ K
Sbjct: 177 DLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESLQTQKFTTK 236
Query: 252 SDVFSFGVLLLEIVSGKKTTGFYRTDSLTLLGYAWDLWTSNRTLELIDPILEDEYSSKHM 311
SDV+SFGVLL E+++ + + ++ + Y L R +L+ EY +
Sbjct: 237 SDVWSFGVLLWELMT-RGAPPYPDVNTFDITVY---LLQGRR-------LLQPEYCPDPL 285
Query: 312 LLRYVNIALLCVQESADDRPTMNEVVSMLT 341
+ L C A+ RP+ +E+VS ++
Sbjct: 286 Y----EVMLKCWHPKAEMRPSFSELVSRIS 311
>pdb|3FXZ|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Ruthenium
Complex Lambda-Fl172
pdb|3FY0|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Ruthenium
Complex Dw1
pdb|4DAW|A Chain A, Crystal Structure Of Pak1 Kinase Domain With The Ruthenium
Phthalimide Complex
Length = 297
Score = 64.7 bits (156), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 54/208 (25%), Positives = 101/208 (48%), Gaps = 20/208 (9%)
Query: 78 LFSFSSVSTATNKFSDANKLGEGGFGPVYKGV-LKKGDEIAVKRLPGRSGQGLREMKNEA 136
L S SV K++ K+G+G G VY + + G E+A++++ + + NE
Sbjct: 9 LRSIVSVGDPKKKYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEI 68
Query: 137 SVIAKVQHKNLVRLLGCCIDKDEKILIYEYMPNKSLDFFLFDP----------TKRMLLD 186
V+ + ++ N+V L + DE ++ EY+ SL + + + L
Sbjct: 69 LVMRENKNPNIVNYLDSYLVGDELWVVMEYLAGGSLTDVVTETCMDEGQIAAVCRECLQA 128
Query: 187 WSANYSSR-----LKVSNILLDKDINPKISDFGM-ARICGGNELQANTSRIVGTYGYMSP 240
+S++ +K NILL D + K++DFG A+I Q+ S +VGT +M+P
Sbjct: 129 LEFLHSNQVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPE---QSKRSXMVGTPYWMAP 185
Query: 241 EYAIQGIFSIKSDVFSFGVLLLEIVSGK 268
E + + K D++S G++ +E++ G+
Sbjct: 186 EVVTRKAYGPKVDIWSLGIMAIEMIEGE 213
>pdb|3Q52|A Chain A, Structure Of Phosphorylated Pak1 Kinase Domain
pdb|3Q53|A Chain A, Structure Of Phosphorylated Pak1 Kinase Domain In Complex
With Atp
Length = 306
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 54/208 (25%), Positives = 101/208 (48%), Gaps = 20/208 (9%)
Query: 78 LFSFSSVSTATNKFSDANKLGEGGFGPVYKGV-LKKGDEIAVKRLPGRSGQGLREMKNEA 136
L S SV K++ K+G+G G VY + + G E+A++++ + + NE
Sbjct: 10 LRSIVSVGDPKKKYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEI 69
Query: 137 SVIAKVQHKNLVRLLGCCIDKDEKILIYEYMPNKSLDFFLFDP----------TKRMLLD 186
V+ + ++ N+V L + DE ++ EY+ SL + + + L
Sbjct: 70 LVMRENKNPNIVNYLDSYLVGDELWVVMEYLAGGSLTDVVTETCMDEGQIAAVCRECLQA 129
Query: 187 WSANYSSR-----LKVSNILLDKDINPKISDFGM-ARICGGNELQANTSRIVGTYGYMSP 240
+S++ +K NILL D + K++DFG A+I Q+ S +VGT +M+P
Sbjct: 130 LEFLHSNQVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPE---QSKRSXMVGTPYWMAP 186
Query: 241 EYAIQGIFSIKSDVFSFGVLLLEIVSGK 268
E + + K D++S G++ +E++ G+
Sbjct: 187 EVVTRKAYGPKVDIWSLGIMAIEMIEGE 214
>pdb|3F66|A Chain A, Human C-Met Kinase In Complex With Quinoxaline Inhibitor
pdb|3F66|B Chain B, Human C-Met Kinase In Complex With Quinoxaline Inhibitor
Length = 298
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 69/273 (25%), Positives = 118/273 (43%), Gaps = 46/273 (16%)
Query: 97 LGEGGFGPVYKGVLKKGD----EIAVKRLPGRSGQG-LREMKNEASVIAKVQHKNLVRLL 151
+G G FG VY G L D AVK L + G + + E ++ H N++ LL
Sbjct: 33 IGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLL 92
Query: 152 GCCIDKD-EKILIYEYMPNKSLDFFL----FDPTKRMLLDWSANYSSRLK---------- 196
G C+ + +++ YM + L F+ +PT + L+ + + +K
Sbjct: 93 GICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKYLASKKFVHR 152
Query: 197 ---VSNILLDKDINPKISDFGMARICGGNELQA--NTSRIVGTYGYMSPEYAIQGIFSIK 251
N +LD+ K++DFG+AR E + N + +M+ E F+ K
Sbjct: 153 DLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESLQTQKFTTK 212
Query: 252 SDVFSFGVLLLEIVSGKKTTGFYRTDSLTLLGYAWDLWTSNRTLE---LIDPILEDEYSS 308
SDV+SFGVLL E+++ + + ++ + Y L R L+ DP+ E
Sbjct: 213 SDVWSFGVLLWELMT-RGAPPYPDVNTFDITVY---LLQGRRLLQPEYCPDPLYE----- 263
Query: 309 KHMLLRYVNIALLCVQESADDRPTMNEVVSMLT 341
+ L C A+ RP+ +E+VS ++
Sbjct: 264 ---------VMLKCWHPKAEMRPSFSELVSRIS 287
>pdb|1F3M|C Chain C, Crystal Structure Of Human SerineTHREONINE KINASE PAK1
pdb|1F3M|D Chain D, Crystal Structure Of Human SerineTHREONINE KINASE PAK1
pdb|1YHW|A Chain A, Crystal Structure Of Pak1 Kinase Domain With One Point
Mutations (K299r)
Length = 297
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 54/208 (25%), Positives = 101/208 (48%), Gaps = 20/208 (9%)
Query: 78 LFSFSSVSTATNKFSDANKLGEGGFGPVYKGV-LKKGDEIAVKRLPGRSGQGLREMKNEA 136
L S SV K++ K+G+G G VY + + G E+A++++ + + NE
Sbjct: 9 LRSIVSVGDPKKKYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEI 68
Query: 137 SVIAKVQHKNLVRLLGCCIDKDEKILIYEYMPNKSLDFFLFDP----------TKRMLLD 186
V+ + ++ N+V L + DE ++ EY+ SL + + + L
Sbjct: 69 LVMRENKNPNIVNYLDSYLVGDELWVVMEYLAGGSLTDVVTETCMDEGQIAAVCRECLQA 128
Query: 187 WSANYSSR-----LKVSNILLDKDINPKISDFGM-ARICGGNELQANTSRIVGTYGYMSP 240
+S++ +K NILL D + K++DFG A+I Q+ S +VGT +M+P
Sbjct: 129 LEFLHSNQVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPE---QSKRSTMVGTPYWMAP 185
Query: 241 EYAIQGIFSIKSDVFSFGVLLLEIVSGK 268
E + + K D++S G++ +E++ G+
Sbjct: 186 EVVTRKAYGPKVDIWSLGIMAIEMIEGE 213
>pdb|3Q6U|A Chain A, Structure Of The Apo Met Receptor Kinase In The
Dually-Phosphorylated, Activated State
Length = 308
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 69/273 (25%), Positives = 118/273 (43%), Gaps = 46/273 (16%)
Query: 97 LGEGGFGPVYKGVLKKGD----EIAVKRLPGRSGQG-LREMKNEASVIAKVQHKNLVRLL 151
+G G FG VY G L D AVK L + G + + E ++ H N++ LL
Sbjct: 38 IGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLL 97
Query: 152 GCCIDKD-EKILIYEYMPNKSLDFFL----FDPTKRMLLDWSANYSSRLK---------- 196
G C+ + +++ YM + L F+ +PT + L+ + + +K
Sbjct: 98 GICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKYLASKKFVHR 157
Query: 197 ---VSNILLDKDINPKISDFGMARICGGNELQA--NTSRIVGTYGYMSPEYAIQGIFSIK 251
N +LD+ K++DFG+AR E + N + +M+ E F+ K
Sbjct: 158 DLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESLQTQKFTTK 217
Query: 252 SDVFSFGVLLLEIVSGKKTTGFYRTDSLTLLGYAWDLWTSNRTLE---LIDPILEDEYSS 308
SDV+SFGVLL E+++ + + ++ + Y L R L+ DP+ E
Sbjct: 218 SDVWSFGVLLWELMT-RGAPPYPDVNTFDITVY---LLQGRRLLQPEYCPDPLYE----- 268
Query: 309 KHMLLRYVNIALLCVQESADDRPTMNEVVSMLT 341
+ L C A+ RP+ +E+VS ++
Sbjct: 269 ---------VMLKCWHPKAEMRPSFSELVSRIS 292
>pdb|3LQ8|A Chain A, Structure Of The Kinase Domain Of C-Met Bound To Xl880
(Gsk1
Length = 302
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 69/273 (25%), Positives = 118/273 (43%), Gaps = 46/273 (16%)
Query: 97 LGEGGFGPVYKGVLKKGD----EIAVKRLPGRSGQG-LREMKNEASVIAKVQHKNLVRLL 151
+G G FG VY G L D AVK L + G + + E ++ H N++ LL
Sbjct: 36 IGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLL 95
Query: 152 GCCIDKD-EKILIYEYMPNKSLDFFL----FDPTKRMLLDWSANYSSRLK---------- 196
G C+ + +++ YM + L F+ +PT + L+ + + +K
Sbjct: 96 GICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKYLASKKFVHR 155
Query: 197 ---VSNILLDKDINPKISDFGMARICGGNELQA--NTSRIVGTYGYMSPEYAIQGIFSIK 251
N +LD+ K++DFG+AR E + N + +M+ E F+ K
Sbjct: 156 DLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESLQTQKFTTK 215
Query: 252 SDVFSFGVLLLEIVSGKKTTGFYRTDSLTLLGYAWDLWTSNRTLE---LIDPILEDEYSS 308
SDV+SFGVLL E+++ + + ++ + Y L R L+ DP+ E
Sbjct: 216 SDVWSFGVLLWELMT-RGAPPYPDVNTFDITVY---LLQGRRLLQPEYCPDPLYE----- 266
Query: 309 KHMLLRYVNIALLCVQESADDRPTMNEVVSMLT 341
+ L C A+ RP+ +E+VS ++
Sbjct: 267 ---------VMLKCWHPKAEMRPSFSELVSRIS 290
>pdb|2G15|A Chain A, Structural Characterization Of Autoinhibited C-Met Kinase
pdb|3RHK|A Chain A, Crystal Structure Of The Catalytic Domain Of C-Met Kinase
In Complex With Arq 197
pdb|3RHK|B Chain B, Crystal Structure Of The Catalytic Domain Of C-Met Kinase
In Complex With Arq 197
Length = 318
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 68/270 (25%), Positives = 118/270 (43%), Gaps = 40/270 (14%)
Query: 97 LGEGGFGPVYKGVLKKGD----EIAVKRLPGRSGQG-LREMKNEASVIAKVQHKNLVRLL 151
+G G FG VY G L D AVK L + G + + E ++ H N++ LL
Sbjct: 56 IGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLL 115
Query: 152 GCCIDKD-EKILIYEYMPNKSLDFFL----FDPTKRMLLDWSANYSSRLK---------- 196
G C+ + +++ YM + L F+ +PT + L+ + + +K
Sbjct: 116 GICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKYLASKKFVHR 175
Query: 197 ---VSNILLDKDINPKISDFGMARICGGNELQA--NTSRIVGTYGYMSPEYAIQGIFSIK 251
N +LD+ K++DFG+AR E + N + +M+ E F+ K
Sbjct: 176 DLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESLQTQKFTTK 235
Query: 252 SDVFSFGVLLLEIVSGKKTTGFYRTDSLTLLGYAWDLWTSNRTLELIDPILEDEYSSKHM 311
SDV+SFGVLL E+++ + + ++ + Y L R +L+ EY +
Sbjct: 236 SDVWSFGVLLWELMT-RGAPPYPDVNTFDITVY---LLQGRR-------LLQPEYCPDPL 284
Query: 312 LLRYVNIALLCVQESADDRPTMNEVVSMLT 341
+ L C A+ RP+ +E+VS ++
Sbjct: 285 Y----EVMLKCWHPKAEMRPSFSELVSRIS 310
>pdb|2WGJ|A Chain A, X-Ray Structure Of Pf-02341066 Bound To The Kinase Domain
Of C-Met
pdb|2WKM|A Chain A, X-Ray Structure Of Pha-00665752 Bound To The Kinase Domain
Of C-Met
pdb|3ZXZ|A Chain A, X-Ray Structure Of Pf-04217903 Bound To The Kinase Domain
Of C-Met
pdb|3ZZE|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
N'-
((3z)-4-Chloro-7-Methyl-2-Oxo-1,2-Dihydro-3h-Indol-3-
Ylidene)-2-(4-Hydroxyphenyl)propanohydrazide
pdb|4AOI|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
4-( 3-((1h-
Pyrrolo(2,3-B)pyridin-3-Yl)methyl)-(1,2,4)triazolo(
4,3-B)(1,2,4) Triazin-6-Yl)benzonitrile
pdb|4AP7|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
4-( (6-(4-
Fluorophenyl)-(1,2,4)triazolo(4,3-B)(1,2,
4)triazin-3-Yl)methyl) Phenol
Length = 306
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 69/273 (25%), Positives = 118/273 (43%), Gaps = 46/273 (16%)
Query: 97 LGEGGFGPVYKGVLKKGD----EIAVKRLPGRSGQG-LREMKNEASVIAKVQHKNLVRLL 151
+G G FG VY G L D AVK L + G + + E ++ H N++ LL
Sbjct: 35 IGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLL 94
Query: 152 GCCIDKD-EKILIYEYMPNKSLDFFL----FDPTKRMLLDWSANYSSRLK---------- 196
G C+ + +++ YM + L F+ +PT + L+ + + +K
Sbjct: 95 GICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKYLASKKFVHR 154
Query: 197 ---VSNILLDKDINPKISDFGMARICGGNELQA--NTSRIVGTYGYMSPEYAIQGIFSIK 251
N +LD+ K++DFG+AR E + N + +M+ E F+ K
Sbjct: 155 DLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESLQTQKFTTK 214
Query: 252 SDVFSFGVLLLEIVSGKKTTGFYRTDSLTLLGYAWDLWTSNRTLE---LIDPILEDEYSS 308
SDV+SFGVLL E+++ + + ++ + Y L R L+ DP+ E
Sbjct: 215 SDVWSFGVLLWELMT-RGAPPYPDVNTFDITVY---LLQGRRLLQPEYCPDPLYE----- 265
Query: 309 KHMLLRYVNIALLCVQESADDRPTMNEVVSMLT 341
+ L C A+ RP+ +E+VS ++
Sbjct: 266 ---------VMLKCWHPKAEMRPSFSELVSRIS 289
>pdb|1U5Q|A Chain A, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5Q|B Chain B, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5R|A Chain A, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5R|B Chain B, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
Length = 348
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 66/267 (24%), Positives = 119/267 (44%), Gaps = 48/267 (17%)
Query: 91 FSDANKLGEGGFGPVYKGV-LKKGDEIAVKRLP---GRSGQGLREMKNEASVIAKVQHKN 146
FSD ++G G FG VY ++ + +A+K++ +S + +++ E + K++H N
Sbjct: 56 FSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPN 115
Query: 147 LVRLLGCCIDKDEKILIYEYMPNKSLDFFLFDPTKRMLLD-----------------WSA 189
++ GC + + L+ EY + D L + K+ L + S
Sbjct: 116 TIQYRGCYLREHTAWLVMEYCLGSASD--LLEVHKKPLQEVEIAAVTHGALQGLAYLHSH 173
Query: 190 NYSSR-LKVSNILLDKDINPKISDFGMARICGGNELQANTSRIVGTYGYMSPEYAI---Q 245
N R +K NILL + K+ DFG A I A + VGT +M+PE + +
Sbjct: 174 NMIHRDVKAGNILLSEPGLVKLGDFGSASIM------APANXFVGTPYWMAPEVILAMDE 227
Query: 246 GIFSIKSDVFSFGVLLLEIVSGKKTTGFYRTDSLTLLGYAWDLWTSNRTLELIDPILEDE 305
G + K DV+S G+ +E+ K + ++++ L + N + P L+
Sbjct: 228 GQYDGKVDVWSLGITCIELAERKPP--LFNMNAMSALYHI----AQNES-----PALQSG 276
Query: 306 YSSKHMLLRYVNIALLCVQESADDRPT 332
+ S++ + N C+Q+ DRPT
Sbjct: 277 HWSEY----FRNFVDSCLQKIPQDRPT 299
>pdb|2PK9|A Chain A, Structure Of The Pho85-pho80 Cdk-cyclin Complex Of The
Phosphate-responsive Signal Transduction Pathway
pdb|2PK9|C Chain C, Structure Of The Pho85-pho80 Cdk-cyclin Complex Of The
Phosphate-responsive Signal Transduction Pathway
pdb|2PMI|A Chain A, Structure Of The Pho85-Pho80 Cdk-Cyclin Complex Of The
Phosphate- Responsive Signal Transduction Pathway With
Bound Atp-Gamma-S
pdb|2PMI|C Chain C, Structure Of The Pho85-Pho80 Cdk-Cyclin Complex Of The
Phosphate- Responsive Signal Transduction Pathway With
Bound Atp-Gamma-S
Length = 317
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 58/208 (27%), Positives = 99/208 (47%), Gaps = 28/208 (13%)
Query: 86 TATNKFSDANKLGEGGFGPVYKGVLKK-GDEIAVKRLPGRSGQGLREMK-NEASVIAKVQ 143
+++++F KLG G + VYKG+ K G +A+K + S +G E S++ +++
Sbjct: 2 SSSSQFKQLEKLGNGTYATVYKGLNKTTGVYVALKEVKLDSEEGTPSTAIREISLMKELK 61
Query: 144 HKNLVRLLGCCIDKDEKILIYEYMPN---KSLDFFLFDPTKRML-------LDWSANYSS 193
H+N+VRL +++ L++E+M N K +D T R L W
Sbjct: 62 HENIVRLYDVIHTENKLTLVFEFMDNDLKKYMDSRTVGNTPRGLELNLVKYFQWQLLQGL 121
Query: 194 RLKVSNILLDKDINP-----------KISDFGMARICGGNELQANT-SRIVGTYGYMSPE 241
N +L +D+ P K+ DFG+AR G + NT S V T Y +P+
Sbjct: 122 AFCHENKILHRDLKPQNLLINKRGQLKLGDFGLARAFG---IPVNTFSSEVVTLWYRAPD 178
Query: 242 YAIQG-IFSIKSDVFSFGVLLLEIVSGK 268
+ +S D++S G +L E+++GK
Sbjct: 179 VLMGSRTYSTSIDIWSCGCILAEMITGK 206
>pdb|2GCD|A Chain A, Tao2 Kinase Domain-Staurosporine Structure
pdb|2GCD|B Chain B, Tao2 Kinase Domain-Staurosporine Structure
Length = 309
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 66/267 (24%), Positives = 119/267 (44%), Gaps = 48/267 (17%)
Query: 91 FSDANKLGEGGFGPVYKGV-LKKGDEIAVKRLP---GRSGQGLREMKNEASVIAKVQHKN 146
FSD ++G G FG VY ++ + +A+K++ +S + +++ E + K++H N
Sbjct: 17 FSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPN 76
Query: 147 LVRLLGCCIDKDEKILIYEYMPNKSLDFFLFDPTKRMLLD-----------------WSA 189
++ GC + + L+ EY + D L + K+ L + S
Sbjct: 77 TIQYRGCYLREHTAWLVMEYCLGSASD--LLEVHKKPLQEVEIAAVTHGALQGLAYLHSH 134
Query: 190 NYSSR-LKVSNILLDKDINPKISDFGMARICGGNELQANTSRIVGTYGYMSPEYAI---Q 245
N R +K NILL + K+ DFG A I A + VGT +M+PE + +
Sbjct: 135 NMIHRDVKAGNILLSEPGLVKLGDFGSASI------MAPANXFVGTPYWMAPEVILAMDE 188
Query: 246 GIFSIKSDVFSFGVLLLEIVSGKKTTGFYRTDSLTLLGYAWDLWTSNRTLELIDPILEDE 305
G + K DV+S G+ +E+ K + ++++ L + N + P L+
Sbjct: 189 GQYDGKVDVWSLGITCIELAERKPP--LFNMNAMSALYHI----AQNES-----PALQSG 237
Query: 306 YSSKHMLLRYVNIALLCVQESADDRPT 332
+ S++ + N C+Q+ DRPT
Sbjct: 238 HWSEY----FRNFVDSCLQKIPQDRPT 260
>pdb|4E4L|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|E Chain E, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|D Chain D, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4N|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 49
pdb|4E4N|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 49
pdb|4E5W|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 26
pdb|4E5W|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 26
pdb|4EHZ|A Chain A, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|B Chain B, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|C Chain C, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|D Chain D, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EI4|A Chain A, Jak1 Kinase (jh1 Domain) In Complex With Compound 20
pdb|4EI4|B Chain B, Jak1 Kinase (jh1 Domain) In Complex With Compound 20
pdb|4FK6|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 72
pdb|4FK6|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 72
Length = 302
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 56/197 (28%), Positives = 91/197 (46%), Gaps = 28/197 (14%)
Query: 97 LGEGGFGPVYKGVL-----KKGDEIAVKRL-PGRSGQGLREMKNEASVIAKVQHKNLVRL 150
LGEG FG V G+++AVK L P G + ++K E ++ + H+N+V+
Sbjct: 29 LGEGHFGKVELCRYDPEGDNTGEQVAVKSLKPESGGNHIADLKKEIEILRNLYHENIVKY 88
Query: 151 LGCCI-DKDEKI-LIYEYMPNKSLDFFLFDPTKRMLLDWSANYSSR-------------- 194
G C D I LI E++P+ SL +L ++ L Y+ +
Sbjct: 89 KGICTEDGGNGIKLIMEFLPSGSLKEYLPKNKNKINLKQQLKYAVQICKGMDYLGSRQYV 148
Query: 195 ---LKVSNILLDKDINPKISDFGMARICGGNE--LQANTSRIVGTYGYMSPEYAIQGIFS 249
L N+L++ + KI DFG+ + ++ R + Y +PE +Q F
Sbjct: 149 HRDLAARNVLVESEHQVKIGDFGLTKAIETDKEXXTVKDDRDSPVFWY-APECLMQSKFY 207
Query: 250 IKSDVFSFGVLLLEIVS 266
I SDV+SFGV L E+++
Sbjct: 208 IASDVWSFGVTLHELLT 224
>pdb|3EYG|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
pdb|3EYH|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
Length = 290
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 56/197 (28%), Positives = 91/197 (46%), Gaps = 28/197 (14%)
Query: 97 LGEGGFGPVYKGVL-----KKGDEIAVKRL-PGRSGQGLREMKNEASVIAKVQHKNLVRL 150
LGEG FG V G+++AVK L P G + ++K E ++ + H+N+V+
Sbjct: 17 LGEGHFGKVELCRYDPEGDNTGEQVAVKSLKPESGGNHIADLKKEIEILRNLYHENIVKY 76
Query: 151 LGCCI-DKDEKI-LIYEYMPNKSLDFFLFDPTKRMLLDWSANYSSR-------------- 194
G C D I LI E++P+ SL +L ++ L Y+ +
Sbjct: 77 KGICTEDGGNGIKLIMEFLPSGSLKEYLPKNKNKINLKQQLKYAVQICKGMDYLGSRQYV 136
Query: 195 ---LKVSNILLDKDINPKISDFGMARICGGNE--LQANTSRIVGTYGYMSPEYAIQGIFS 249
L N+L++ + KI DFG+ + ++ R + Y +PE +Q F
Sbjct: 137 HRDLAARNVLVESEHQVKIGDFGLTKAIETDKEXXTVKDDRDSPVFWY-APECLMQSKFY 195
Query: 250 IKSDVFSFGVLLLEIVS 266
I SDV+SFGV L E+++
Sbjct: 196 IASDVWSFGVTLHELLT 212
>pdb|1RJB|A Chain A, Crystal Structure Of Flt3
Length = 344
Score = 62.8 bits (151), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 61/219 (27%), Positives = 97/219 (44%), Gaps = 51/219 (23%)
Query: 97 LGEGGFGPVYK----GVLKKGD--EIAVKRLPGRSGQGLRE-MKNEASVIAKV-QHKNLV 148
LG G FG V G+ K G ++AVK L ++ RE + +E ++ ++ H+N+V
Sbjct: 53 LGSGAFGKVMNATAYGISKTGVSIQVAVKMLKEKADSSEREALMSELKMMTQLGSHENIV 112
Query: 149 RLLGCCIDKDEKILIYEYMPNKSLDFFL-------------FDPTKRM------------ 183
LLG C LI+EY L +L ++ KR+
Sbjct: 113 NLLGACTLSGPIYLIFEYCCYGDLLNYLRSKREKFSEDEIEYENQKRLEEEEDLNVLTFE 172
Query: 184 --------------LLDWSANYSSRLKVSNILLDKDINPKISDFGMAR--ICGGNELQAN 227
L++ + L N+L+ KI DFG+AR + N +
Sbjct: 173 DLLCFAYQVAKGMEFLEFKSCVHRDLAARNVLVTHGKVVKICDFGLARDIMSDSNYVVRG 232
Query: 228 TSRIVGTYGYMSPEYAIQGIFSIKSDVFSFGVLLLEIVS 266
+R+ +M+PE +GI++IKSDV+S+G+LL EI S
Sbjct: 233 NARL--PVKWMAPESLFEGIYTIKSDVWSYGILLWEIFS 269
>pdb|4GS6|A Chain A, Irreversible Inhibition Of Tak1 Kinase By 5z-7-oxozeaenol
Length = 315
Score = 62.8 bits (151), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 63/269 (23%), Positives = 115/269 (42%), Gaps = 47/269 (17%)
Query: 97 LGEGGFGPVYKGVLKKGDEIAVKRLPGRSGQGLREMKNEASVIAKVQHKNLVRLLGCCID 156
+G G FG V K + D +A+K++ S + + E +++V H N+V+L G C++
Sbjct: 17 VGRGAFGVVCKAKWRAKD-VAIKQIESESER--KAFIVELRQLSRVNHPNIVKLYGACLN 73
Query: 157 KDEKILIYEYMPNKSLDFFLF--DP----TKRMLLDWSANYSSRLKV-----SNILLDKD 205
L+ EY SL L +P T + W S + L+ +D
Sbjct: 74 P--VCLVMEYAEGGSLYNVLHGAEPLPYYTAAHAMSWCLQCSQGVAYLHSMQPKALIHRD 131
Query: 206 INP------------KISDFGMARICGGNELQANTSRIVGTYGYMSPEYAIQGIFSIKSD 253
+ P KI DFG A ++Q + + G+ +M+PE +S K D
Sbjct: 132 LKPPNLLLVAGGTVLKICDFGTA-----CDIQTHMTNNKGSAAWMAPEVFEGSNYSEKCD 186
Query: 254 VFSFGVLLLEIVSGKKTTGFYRTDSLTLLGYAWDLWTSNRTLELIDPILEDEYSSKHMLL 313
VFS+G++L E+++ +K + ++ W + R P++ K++
Sbjct: 187 VFSWGIILWEVITRRKPFDEIGGPAFRIM---WAVHNGTRP-----PLI------KNLPK 232
Query: 314 RYVNIALLCVQESADDRPTMNEVVSMLTD 342
++ C + RP+M E+V ++T
Sbjct: 233 PIESLMTRCWSKDPSQRPSMEEIVKIMTH 261
>pdb|2EVA|A Chain A, Structural Basis For The Interaction Of Tak1 Kinase With
Its Activating Protein Tab1
pdb|2YIY|A Chain A, Crystal Structure Of Compound 8 Bound To Tak1-Tab
Length = 307
Score = 62.8 bits (151), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 68/299 (22%), Positives = 121/299 (40%), Gaps = 48/299 (16%)
Query: 97 LGEGGFGPVYKGVLKKGDEIAVKRLPGRSGQGLREMKNEASVIAKVQHKNLVRLLGCCID 156
+G G FG V K + D +A+K++ S + + E +++V H N+V+L G C++
Sbjct: 16 VGRGAFGVVCKAKWRAKD-VAIKQIESESER--KAFIVELRQLSRVNHPNIVKLYGACLN 72
Query: 157 KDEKILIYEYMPNKSLDFFLF--DP----TKRMLLDWSANYSSRLKV-----SNILLDKD 205
L+ EY SL L +P T + W S + L+ +D
Sbjct: 73 P--VCLVMEYAEGGSLYNVLHGAEPLPYYTAAHAMSWCLQCSQGVAYLHSMQPKALIHRD 130
Query: 206 INP------------KISDFGMARICGGNELQANTSRIVGTYGYMSPEYAIQGIFSIKSD 253
+ P KI DFG A ++Q + + G+ +M+PE +S K D
Sbjct: 131 LKPPNLLLVAGGTVLKICDFGTA-----CDIQTHMTNNKGSAAWMAPEVFEGSNYSEKCD 185
Query: 254 VFSFGVLLLEIVSGKKTTGFYRTDSLTLLGYAWDLWTSNRTLELIDPILEDEYSSKHMLL 313
VFS+G++L E+++ +K + ++ W + R P++ K++
Sbjct: 186 VFSWGIILWEVITRRKPFDEIGGPAFRIM---WAVHNGTRP-----PLI------KNLPK 231
Query: 314 RYVNIALLCVQESADDRPTMNEVVSMLTDEAAALFPPKQPAFSYVRNTVTSTSSTGKTE 372
++ C + RP+M E+V ++T FP Y G+ E
Sbjct: 232 PIESLMTRCWSKDPSQRPSMEEIVKIMT-HLMRYFPGADEPLQYPCQHSLPPGEDGRVE 289
>pdb|3Q4Z|A Chain A, Structure Of Unphosphorylated Pak1 Kinase Domain
pdb|3Q4Z|B Chain B, Structure Of Unphosphorylated Pak1 Kinase Domain
Length = 306
Score = 62.8 bits (151), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 52/203 (25%), Positives = 99/203 (48%), Gaps = 20/203 (9%)
Query: 83 SVSTATNKFSDANKLGEGGFGPVYKGV-LKKGDEIAVKRLPGRSGQGLREMKNEASVIAK 141
SV K++ K+G+G G VY + + G E+A++++ + + NE V+ +
Sbjct: 15 SVGDPKKKYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRE 74
Query: 142 VQHKNLVRLLGCCIDKDEKILIYEYMPNKSLDFFLFDP----------TKRMLLDWSANY 191
++ N+V L + DE ++ EY+ SL + + + L +
Sbjct: 75 NKNPNIVNYLDSYLVGDELWVVMEYLAGGSLTDVVTETCMDEGQIAAVCRECLQALEFLH 134
Query: 192 SSR-----LKVSNILLDKDINPKISDFGM-ARICGGNELQANTSRIVGTYGYMSPEYAIQ 245
S++ +K NILL D + K++DFG A+I Q+ S +VGT +M+PE +
Sbjct: 135 SNQVIHRNIKSDNILLGMDGSVKLTDFGFCAQITPE---QSKRSTMVGTPYWMAPEVVTR 191
Query: 246 GIFSIKSDVFSFGVLLLEIVSGK 268
+ K D++S G++ +E++ G+
Sbjct: 192 KAYGPKVDIWSLGIMAIEMIEGE 214
>pdb|2IVT|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain
pdb|2IVU|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain Complexed With The Inhibitor Zd6474
pdb|2X2K|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2L|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2M|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2M|B Chain B, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
Length = 314
Score = 62.4 bits (150), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 77/289 (26%), Positives = 115/289 (39%), Gaps = 66/289 (22%)
Query: 97 LGEGGFGPVYKGVL--KKGDE----IAVKRL-PGRSGQGLREMKNEASVIAKVQHKNLVR 149
LGEG FG V K KG +AVK L S LR++ +E +V+ +V H ++++
Sbjct: 31 LGEGEFGKVVKATAFHLKGRAGYTTVAVKMLKENASPSELRDLLSEFNVLKQVNHPHVIK 90
Query: 150 LLGCCIDKDEKILIYEYMPNKSLDFFLFD----------------------PTKRML--- 184
L G C +LI EY SL FL + P +R L
Sbjct: 91 LYGACSQDGPLLLIVEYAKYGSLRGFLRESRKVGPGYLGSGGSRNSSSLDHPDERALTMG 150
Query: 185 ----LDWS----ANYSSRLKV-------SNILLDKDINPKISDFGMARICGGNELQANTS 229
W Y + +K+ NIL+ + KISDFG++R + S
Sbjct: 151 DLISFAWQISQGMQYLAEMKLVHRDLAARNILVAEGRKMKISDFGLSRDVYEEDSXVKRS 210
Query: 230 RIVGTYGYMSPEYAIQGIFSIKSDVFSFGVLLLEIVS--GKKTTGFYRTDSLTLLGYAWD 287
+ +M+ E I++ +SDV+SFGVLL EIV+ G G LL
Sbjct: 211 QGRIPVKWMAIESLFDHIYTTQSDVWSFGVLLWEIVTLGGNPYPGIPPERLFNLL----- 265
Query: 288 LWTSNRTLELIDPILEDEYSSKHMLLRYVNIALLCVQESADDRPTMNEV 336
+ +E D E+ Y + L C ++ D RP ++
Sbjct: 266 --KTGHRMERPDNCSEEMY----------RLMLQCWKQEPDKRPVFADI 302
>pdb|3PP0|A Chain A, Crystal Structure Of The Kinase Domain Of Human Her2
(Erbb2).
pdb|3PP0|B Chain B, Crystal Structure Of The Kinase Domain Of Human Her2
(Erbb2).
pdb|3RCD|A Chain A, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|B Chain B, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|C Chain C, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|D Chain D, Her2 Kinase Domain Complexed With Tak-285
Length = 338
Score = 62.0 bits (149), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 54/193 (27%), Positives = 93/193 (48%), Gaps = 24/193 (12%)
Query: 97 LGEGGFGPVYKGVLKKGDE-----IAVKRL-PGRSGQGLREMKNEASVIAKVQHKNLVRL 150
LG G FG VYKG+ E +A+K L S + +E+ +EA V+A V + RL
Sbjct: 25 LGSGAFGTVYKGIWIPDGENVKIPVAIKVLRENTSPKANKEILDEAYVMAGVGSPYVSRL 84
Query: 151 LGCCIDKDEKILIYEYMPNKSLDFFLFDPTKRM----LLDWSANYSS------------- 193
LG C+ + L+ + MP L + + R+ LL+W +
Sbjct: 85 LGICLTSTVQ-LVTQLMPYGCLLDHVRENRGRLGSQDLLNWCMQIAKGMSYLEDVRLVHR 143
Query: 194 RLKVSNILLDKDINPKISDFGMARICGGNELQANTSRIVGTYGYMSPEYAIQGIFSIKSD 253
L N+L+ + KI+DFG+AR+ +E + + +M+ E ++ F+ +SD
Sbjct: 144 DLAARNVLVKSPNHVKITDFGLARLLDIDETEYHADGGKVPIKWMALESILRRRFTHQSD 203
Query: 254 VFSFGVLLLEIVS 266
V+S+GV + E+++
Sbjct: 204 VWSYGVTVWELMT 216
>pdb|2XIK|A Chain A, Structure Of Human Ysk1 (Yeast Sps1-Ste20-Related Kinase
1)
Length = 294
Score = 62.0 bits (149), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 47/195 (24%), Positives = 94/195 (48%), Gaps = 19/195 (9%)
Query: 91 FSDANKLGEGGFGPVYKGVLKKGDEIAVKRLPG--RSGQGLREMKNEASVIAKVQHKNLV 148
F+ +++G+G FG VYKG+ E+ ++ + + +++ E +V+++ +
Sbjct: 21 FTKLDRIGKGSFGEVYKGIDNHTKEVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYIT 80
Query: 149 RLLGCCIDKDEKILIYEYMPNKS-LDFFLFDPT---------KRMLLDWSANYSSR---- 194
R G + + +I EY+ S LD P + +L +S R
Sbjct: 81 RYFGSYLKSTKLWIIMEYLGGGSALDLLKPGPLEETYIATILREILKGLDYLHSERKIHR 140
Query: 195 -LKVSNILLDKDINPKISDFGMARICGGNELQANTSRIVGTYGYMSPEYAIQGIFSIKSD 253
+K +N+LL + + K++DFG+A +++ N VGT +M+PE Q + K+D
Sbjct: 141 DIKAANVLLSEQGDVKLADFGVAGQLTDTQIKRNX--FVGTPFWMAPEVIKQSAYDFKAD 198
Query: 254 VFSFGVLLLEIVSGK 268
++S G+ +E+ G+
Sbjct: 199 IWSLGITAIELAKGE 213
>pdb|2VWI|A Chain A, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|B Chain B, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|C Chain C, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|D Chain D, Structure Of The Osr1 Kinase, A Hypertension Drug Target
Length = 303
Score = 62.0 bits (149), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 67/260 (25%), Positives = 114/260 (43%), Gaps = 46/260 (17%)
Query: 112 KGDEIAVKRLPGRSGQ-GLREMKNEASVIAKVQHKNLVRLLGCCIDKDEKILIYEYMPNK 170
K +++A+KR+ Q + E+ E +++ H N+V + KDE L+ + +
Sbjct: 39 KKEKVAIKRINLEKCQTSMDELLKEIQAMSQCHHPNIVSYYTSFVVKDELWLVMKLLSGG 98
Query: 171 S-LDFFLF----DPTKRMLLDWS-------------------ANYSSRLKVSNILLDKDI 206
S LD K +LD S +K NILL +D
Sbjct: 99 SVLDIIKHIVAKGEHKSGVLDESTIATILREVLEGLEYLHKNGQIHRDVKAGNILLGEDG 158
Query: 207 NPKISDFGM-ARICGGNELQANTSR--IVGTYGYMSPEY--AIQGIFSIKSDVFSFGVLL 261
+ +I+DFG+ A + G ++ N R VGT +M+PE ++G + K+D++SFG+
Sbjct: 159 SVQIADFGVSAFLATGGDITRNKVRKTFVGTPCWMAPEVMEQVRG-YDFKADIWSFGITA 217
Query: 262 LEIVSGKKTTGFYRTDSLTLLGYAWDLWTSNRTLELIDPILEDEYSSKHMLLRY----VN 317
+E+ +G Y + +L TL+ P LE K ML +Y
Sbjct: 218 IELATGAAPYHKYPPMKVLML-----------TLQNDPPSLETGVQDKEMLKKYGKSFRK 266
Query: 318 IALLCVQESADDRPTMNEVV 337
+ LC+Q+ + RPT E++
Sbjct: 267 MISLCLQKDPEKRPTAAELL 286
>pdb|2IVS|A Chain A, Crystal Structure Of Non-Phosphorylated Ret Tyrosine
Kinase Domain
pdb|2IVS|B Chain B, Crystal Structure Of Non-Phosphorylated Ret Tyrosine
Kinase Domain
Length = 314
Score = 62.0 bits (149), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 77/289 (26%), Positives = 115/289 (39%), Gaps = 66/289 (22%)
Query: 97 LGEGGFGPVYKGVL--KKGDE----IAVKRL-PGRSGQGLREMKNEASVIAKVQHKNLVR 149
LGEG FG V K KG +AVK L S LR++ +E +V+ +V H ++++
Sbjct: 31 LGEGEFGKVVKATAFHLKGRAGYTTVAVKMLKENASPSELRDLLSEFNVLKQVNHPHVIK 90
Query: 150 LLGCCIDKDEKILIYEYMPNKSLDFFLFD----------------------PTKRML--- 184
L G C +LI EY SL FL + P +R L
Sbjct: 91 LYGACSQDGPLLLIVEYAKYGSLRGFLRESRKVGPGYLGSGGSRNSSSLDHPDERALTMG 150
Query: 185 ----LDWS----ANYSSRLKV-------SNILLDKDINPKISDFGMARICGGNELQANTS 229
W Y + +K+ NIL+ + KISDFG++R + S
Sbjct: 151 DLISFAWQISQGMQYLAEMKLVHRDLAARNILVAEGRKMKISDFGLSRDVYEEDSYVKRS 210
Query: 230 RIVGTYGYMSPEYAIQGIFSIKSDVFSFGVLLLEIVS--GKKTTGFYRTDSLTLLGYAWD 287
+ +M+ E I++ +SDV+SFGVLL EIV+ G G LL
Sbjct: 211 QGRIPVKWMAIESLFDHIYTTQSDVWSFGVLLWEIVTLGGNPYPGIPPERLFNLL----- 265
Query: 288 LWTSNRTLELIDPILEDEYSSKHMLLRYVNIALLCVQESADDRPTMNEV 336
+ +E D E+ Y + L C ++ D RP ++
Sbjct: 266 --KTGHRMERPDNCSEEMY----------RLMLQCWKQEPDKRPVFADI 302
>pdb|3DAK|A Chain A, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|B Chain B, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|C Chain C, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|D Chain D, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
Length = 290
Score = 62.0 bits (149), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 67/260 (25%), Positives = 114/260 (43%), Gaps = 46/260 (17%)
Query: 112 KGDEIAVKRLPGRSGQ-GLREMKNEASVIAKVQHKNLVRLLGCCIDKDEKILIYEYMPNK 170
K +++A+KR+ Q + E+ E +++ H N+V + KDE L+ + +
Sbjct: 34 KKEKVAIKRINLEKCQTSMDELLKEIQAMSQCHHPNIVSYYTSFVVKDELWLVMKLLSGG 93
Query: 171 S-LDFFLF----DPTKRMLLDWS-------------------ANYSSRLKVSNILLDKDI 206
S LD K +LD S +K NILL +D
Sbjct: 94 SVLDIIKHIVAKGEHKSGVLDESTIATILREVLEGLEYLHKNGQIHRDVKAGNILLGEDG 153
Query: 207 NPKISDFGM-ARICGGNELQANTSR--IVGTYGYMSPEY--AIQGIFSIKSDVFSFGVLL 261
+ +I+DFG+ A + G ++ N R VGT +M+PE ++G + K+D++SFG+
Sbjct: 154 SVQIADFGVSAFLATGGDITRNKVRKTFVGTPCWMAPEVMEQVRG-YDFKADIWSFGITA 212
Query: 262 LEIVSGKKTTGFYRTDSLTLLGYAWDLWTSNRTLELIDPILEDEYSSKHMLLRY----VN 317
+E+ +G Y + +L TL+ P LE K ML +Y
Sbjct: 213 IELATGAAPYHKYPPMKVLML-----------TLQNDPPSLETGVQDKEMLKKYGKSFRK 261
Query: 318 IALLCVQESADDRPTMNEVV 337
+ LC+Q+ + RPT E++
Sbjct: 262 MISLCLQKDPEKRPTAAELL 281
>pdb|2IVV|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain Complexed With The Inhibitor Pp1
Length = 314
Score = 62.0 bits (149), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 76/289 (26%), Positives = 113/289 (39%), Gaps = 66/289 (22%)
Query: 97 LGEGGFGPVYKGVL--KKGDE----IAVKRL-PGRSGQGLREMKNEASVIAKVQHKNLVR 149
LGEG FG V K KG +AVK L S LR++ +E +V+ +V H ++++
Sbjct: 31 LGEGEFGKVVKATAFHLKGRAGYTTVAVKMLKENASPSELRDLLSEFNVLKQVNHPHVIK 90
Query: 150 LLGCCIDKDEKILIYEYMPNKSLDFFLFD----------------------PTKRML--- 184
L G C +LI EY SL FL + P +R L
Sbjct: 91 LYGACSQDGPLLLIVEYAKYGSLRGFLRESRKVGPGYLGSGGSRNSSSLDHPDERALTMG 150
Query: 185 ----LDWSANYSSR-----------LKVSNILLDKDINPKISDFGMARICGGNELQANTS 229
W + + L NIL+ + KISDFG++R + S
Sbjct: 151 DLISFAWQISQGMQYLAEMSLVHRDLAARNILVAEGRKMKISDFGLSRDVYEEDSXVKRS 210
Query: 230 RIVGTYGYMSPEYAIQGIFSIKSDVFSFGVLLLEIVS--GKKTTGFYRTDSLTLLGYAWD 287
+ +M+ E I++ +SDV+SFGVLL EIV+ G G LL
Sbjct: 211 QGRIPVKWMAIESLFDHIYTTQSDVWSFGVLLWEIVTLGGNPYPGIPPERLFNLL----- 265
Query: 288 LWTSNRTLELIDPILEDEYSSKHMLLRYVNIALLCVQESADDRPTMNEV 336
+ +E D E+ Y + L C ++ D RP ++
Sbjct: 266 --KTGHRMERPDNCSEEMY----------RLMLQCWKQEPDKRPVFADI 302
>pdb|1BI8|A Chain A, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structures Cdk6-P19ink4d Inhibitor Complex
pdb|1BI8|C Chain C, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structures Cdk6-P19ink4d Inhibitor Complex
pdb|1BI7|A Chain A, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structure Of The Cdk6-P16ink4a Tumor Suppressor
Complex
pdb|1BLX|A Chain A, P19ink4dCDK6 COMPLEX
pdb|1G3N|A Chain A, Structure Of A P18(Ink4c)-Cdk6-K-Cyclin Ternary Complex
pdb|1G3N|E Chain E, Structure Of A P18(Ink4c)-Cdk6-K-Cyclin Ternary Complex
Length = 326
Score = 62.0 bits (149), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 55/211 (26%), Positives = 97/211 (45%), Gaps = 32/211 (15%)
Query: 87 ATNKFSDANKLGEGGFGPVYKGV-LKKGDE-IAVKRL---PGRSGQGLREMKNEASV--I 139
A ++ ++GEG +G V+K LK G +A+KR+ G G L ++ A + +
Sbjct: 9 ADQQYECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHL 68
Query: 140 AKVQHKNLVRLLGCCI----DKDEKI-LIYEYM----------------PNKSLDFFLFD 178
+H N+VRL C D++ K+ L++E++ P +++ +F
Sbjct: 69 ETFEHPNVVRLFDVCTVSRTDRETKLTLVFEHVDQDLTTYLDKVPEPGVPTETIKDMMFQ 128
Query: 179 PTKRMLLDWSANYSSR-LKVSNILLDKDINPKISDFGMARICGGNELQANTSRIVGTYGY 237
+ + S R LK NIL+ K++DFG+ARI Q + +V T Y
Sbjct: 129 LLRGLDFLHSHRVVHRDLKPQNILVTSSGQIKLADFGLARIYS---FQMALTSVVVTLWY 185
Query: 238 MSPEYAIQGIFSIKSDVFSFGVLLLEIVSGK 268
+PE +Q ++ D++S G + E+ K
Sbjct: 186 RAPEVLLQSSYATPVDLWSVGCIFAEMFRRK 216
>pdb|1JOW|B Chain B, Crystal Structure Of A Complex Of Human Cdk6 And A Viral
Cyclin
pdb|1XO2|B Chain B, Crystal Structure Of A Human Cyclin-Dependent Kinase 6
Complex With A Flavonol Inhibitor, Fisetin
pdb|2EUF|B Chain B, X-Ray Structure Of Human Cdk6-Vcyclin In Complex With The
Inhibitor Pd0332991
pdb|2F2C|B Chain B, X-Ray Structure Of Human Cdk6-Vcyclinwith The Inhibitor
Aminopurvalanol
Length = 308
Score = 61.6 bits (148), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 55/211 (26%), Positives = 97/211 (45%), Gaps = 32/211 (15%)
Query: 87 ATNKFSDANKLGEGGFGPVYKGV-LKKGDE-IAVKRL---PGRSGQGLREMKNEASV--I 139
A ++ ++GEG +G V+K LK G +A+KR+ G G L ++ A + +
Sbjct: 9 ADQQYECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHL 68
Query: 140 AKVQHKNLVRLLGCCI----DKDEKI-LIYEYM----------------PNKSLDFFLFD 178
+H N+VRL C D++ K+ L++E++ P +++ +F
Sbjct: 69 ETFEHPNVVRLFDVCTVSRTDRETKLTLVFEHVDQDLTTYLDKVPEPGVPTETIKDMMFQ 128
Query: 179 PTKRMLLDWSANYSSR-LKVSNILLDKDINPKISDFGMARICGGNELQANTSRIVGTYGY 237
+ + S R LK NIL+ K++DFG+ARI Q + +V T Y
Sbjct: 129 LLRGLDFLHSHRVVHRDLKPQNILVTSSGQIKLADFGLARI---YSFQMALTSVVVTLWY 185
Query: 238 MSPEYAIQGIFSIKSDVFSFGVLLLEIVSGK 268
+PE +Q ++ D++S G + E+ K
Sbjct: 186 RAPEVLLQSSYATPVDLWSVGCIFAEMFRRK 216
>pdb|3NUP|A Chain A, Cdk6 (Monomeric) In Complex With Inhibitor
pdb|3NUX|A Chain A, Cdk6 (Monomeric) In Complex With Inhibitor
pdb|4AUA|A Chain A, Liganded X-ray Crystal Structure Of Cyclin Dependent
Kinase 6 (cdk6)
pdb|4EZ5|A Chain A, Cdk6 (monomeric) In Complex With Inhibitor
Length = 307
Score = 61.6 bits (148), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 55/211 (26%), Positives = 97/211 (45%), Gaps = 32/211 (15%)
Query: 87 ATNKFSDANKLGEGGFGPVYKGV-LKKGDE-IAVKRL---PGRSGQGLREMKNEASV--I 139
A ++ ++GEG +G V+K LK G +A+KR+ G G L ++ A + +
Sbjct: 9 ADQQYECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHL 68
Query: 140 AKVQHKNLVRLLGCCI----DKDEKI-LIYEYM----------------PNKSLDFFLFD 178
+H N+VRL C D++ K+ L++E++ P +++ +F
Sbjct: 69 ETFEHPNVVRLFDVCTVSRTDRETKLTLVFEHVDQDLTTYLDKVPEPGVPTETIKDMMFQ 128
Query: 179 PTKRMLLDWSANYSSR-LKVSNILLDKDINPKISDFGMARICGGNELQANTSRIVGTYGY 237
+ + S R LK NIL+ K++DFG+ARI Q + +V T Y
Sbjct: 129 LLRGLDFLHSHRVVHRDLKPQNILVTSSGQIKLADFGLARI---YSFQMALTSVVVTLWY 185
Query: 238 MSPEYAIQGIFSIKSDVFSFGVLLLEIVSGK 268
+PE +Q ++ D++S G + E+ K
Sbjct: 186 RAPEVLLQSSYATPVDLWSVGCIFAEMFRRK 216
>pdb|2P0C|A Chain A, Catalytic Domain Of The Proto-Oncogene Tyrosine-Protein
Kina
pdb|2P0C|B Chain B, Catalytic Domain Of The Proto-Oncogene Tyrosine-Protein
Kina
pdb|3BRB|A Chain A, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Tyrosine- Protein Kinase Mer In Complex
With Adp
pdb|3BRB|B Chain B, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Tyrosine- Protein Kinase Mer In Complex
With Adp
pdb|3BPR|A Chain A, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|B Chain B, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|C Chain C, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|D Chain D, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3TCP|A Chain A, Crystal Structure Of The Catalytic Domain Of The
Proto-Oncogene Tyrosine-Protein Kinase Mer In Complex
With Inhibitor Unc569
pdb|3TCP|B Chain B, Crystal Structure Of The Catalytic Domain Of The
Proto-Oncogene Tyrosine-Protein Kinase Mer In Complex
With Inhibitor Unc569
Length = 313
Score = 61.6 bits (148), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 55/205 (26%), Positives = 98/205 (47%), Gaps = 37/205 (18%)
Query: 97 LGEGGFGPVYKGVLKKGD----EIAVK--RLPGRSGQGLREMKNEASVIAKVQHKNLVRL 150
LGEG FG V +G LK+ D ++AVK +L S + + E +EA+ + H N++RL
Sbjct: 42 LGEGEFGSVMEGNLKQEDGTSLKVAVKTMKLDNSSQREIEEFLSEAACMKDFSHPNVIRL 101
Query: 151 LGCCIDKDEK-------------------ILIY-------EYMPNKSLDFFLFDPTKRML 184
LG CI+ + L+Y +++P ++L F+ D M
Sbjct: 102 LGVCIEMSSQGIPKPMVILPFMKYGDLHTYLLYSRLETGPKHIPLQTLLKFMVDIALGME 161
Query: 185 LDWSANYSSR-LKVSNILLDKDINPKISDFGMAR--ICGGNELQANTSRIVGTYGYMSPE 241
+ N+ R L N +L D+ ++DFG+++ G Q +++ +++ E
Sbjct: 162 YLSNRNFLHRDLAARNCMLRDDMTVCVADFGLSKKIYSGDYYRQGRIAKM--PVKWIAIE 219
Query: 242 YAIQGIFSIKSDVFSFGVLLLEIVS 266
+++ KSDV++FGV + EI +
Sbjct: 220 SLADRVYTSKSDVWAFGVTMWEIAT 244
>pdb|4EQM|A Chain A, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|B Chain B, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|C Chain C, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|D Chain D, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|E Chain E, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|F Chain F, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
Length = 294
Score = 61.2 bits (147), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 49/202 (24%), Positives = 97/202 (48%), Gaps = 27/202 (13%)
Query: 90 KFSDANKLGEGGFGPVYKG---VLKKGDEIAVKRL---PGRSGQGLREMKNEASVIAKVQ 143
++ +KLG GG VY +L ++A+K + P + L+ + E +++
Sbjct: 12 RYKIVDKLGGGGMSTVYLAEDTILNI--KVAIKAIFIPPREKEETLKRFEREVHNSSQLS 69
Query: 144 HKNLVRLLGCCIDKDEKILIYEYMPNKSLDFFLFDPTKRMLLDWSANYSSRL-------- 195
H+N+V ++ + D L+ EY+ +L ++ + + +D + N+++++
Sbjct: 70 HQNIVSMIDVDEEDDCYYLVMEYIEGPTLSEYI-ESHGPLSVDTAINFTNQILDGIKHAH 128
Query: 196 ---------KVSNILLDKDINPKISDFGMARICGGNELQANTSRIVGTYGYMSPEYAIQG 246
K NIL+D + KI DFG+A+ L T+ ++GT Y SPE A
Sbjct: 129 DMRIVHRDIKPQNILIDSNKTLKIFDFGIAKALSETSL-TQTNHVLGTVQYFSPEQAKGE 187
Query: 247 IFSIKSDVFSFGVLLLEIVSGK 268
+D++S G++L E++ G+
Sbjct: 188 ATDECTDIYSIGIVLYEMLVGE 209
>pdb|2I1M|A Chain A, Cfms Tyrosine Kinase (Tie2 Kid) In Complex With An
Arylamide Inhibitor
Length = 333
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 61/218 (27%), Positives = 97/218 (44%), Gaps = 42/218 (19%)
Query: 89 NKFSDANKLGEGGFGPVYKGV---LKKGD---EIAVKRLPGRSGQGLRE-MKNEASVIAK 141
N LG G FG V + L K D ++AVK L + +E + +E +++
Sbjct: 46 NNLQFGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSH 105
Query: 142 V-QHKNLVRLLGCCIDKDEKILIYEYMPNKSLDFFL--------FDP---------TKRM 183
+ QH+N+V LLG C ++I EY L FL DP + R
Sbjct: 106 LGQHENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKSRVLETDPAFAIANSTASTRD 165
Query: 184 LLDWSANYSSRLK-------------VSNILLDKDINPKISDFGMAR--ICGGNELQANT 228
LL +S+ + + N+LL KI DFG+AR + N +
Sbjct: 166 LLHFSSQVAQGMAFLASKNCIHRDVAARNVLLTNGHVAKIGDFGLARDIMNDSNYIVKGN 225
Query: 229 SRIVGTYGYMSPEYAIQGIFSIKSDVFSFGVLLLEIVS 266
+R+ +M+PE +++++SDV+S+G+LL EI S
Sbjct: 226 ARL--PVKWMAPESIFDCVYTVQSDVWSYGILLWEIFS 261
>pdb|3BEA|A Chain A, Cfms Tyrosine Kinase (Tie2 Kid) In Complex With A
Pyrimidinopyridone Inhibitor
Length = 333
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 61/218 (27%), Positives = 97/218 (44%), Gaps = 42/218 (19%)
Query: 89 NKFSDANKLGEGGFGPVYKGV---LKKGD---EIAVKRLPGRSGQGLRE-MKNEASVIAK 141
N LG G FG V + L K D ++AVK L + +E + +E +++
Sbjct: 46 NNLQFGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSH 105
Query: 142 V-QHKNLVRLLGCCIDKDEKILIYEYMPNKSLDFFL--------FDP---------TKRM 183
+ QH+N+V LLG C ++I EY L FL DP + R
Sbjct: 106 LGQHENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKSRVLETDPAFAIANSTLSTRD 165
Query: 184 LLDWSANYSSRLK-------------VSNILLDKDINPKISDFGMAR--ICGGNELQANT 228
LL +S+ + + N+LL KI DFG+AR + N +
Sbjct: 166 LLHFSSQVAQGMAFLASKNCIHRDVAARNVLLTNGHVAKIGDFGLARDIMNDSNYIVKGN 225
Query: 229 SRIVGTYGYMSPEYAIQGIFSIKSDVFSFGVLLLEIVS 266
+R+ +M+PE +++++SDV+S+G+LL EI S
Sbjct: 226 ARL--PVKWMAPESIFDCVYTVQSDVWSYGILLWEIFS 261
>pdb|2I0V|A Chain A, C-Fms Tyrosine Kinase In Complex With A Quinolone
Inhibitor
pdb|2I0Y|A Chain A, Cfms Tyrosine Kinase (Fgf Kid) In Complex With An
Arylamide Inhibitor
pdb|3DPK|A Chain A, Cfms Tyrosine Kinase In Complex With A Pyridopyrimidinone
Inhibitor
pdb|3KRJ|A Chain A, Cfms Tyrosine Kinase In Complex With
4-Cyano-1h-Imidazole-2-Carboxylic Acid
(2-Cyclohex-1-Enyl-4-Piperidin-4-Yl-Phenyl)-Amide
pdb|3KRL|A Chain A, Cfms Tyrosine Kinase In Complex With
5-Cyano-Furan-2-Carboxylic Acid
[4-(4-Methyl-Piperazin-1-Yl)-2-Piperidin-1-Yl-Phenyl]-
Amide
Length = 335
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 60/220 (27%), Positives = 98/220 (44%), Gaps = 44/220 (20%)
Query: 89 NKFSDANKLGEGGFGPVYKGV---LKKGD---EIAVKRLPGRSGQGLRE-MKNEASVIAK 141
N LG G FG V + L K D ++AVK L + +E + +E +++
Sbjct: 46 NNLQFGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSH 105
Query: 142 V-QHKNLVRLLGCCIDKDEKILIYEYMPNKSLDFFL-----------FDPTK-------- 181
+ QH+N+V LLG C ++I EY L FL ++P+
Sbjct: 106 LGQHENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKRPPGLEYSYNPSHNPEEQLSS 165
Query: 182 RMLLDWSANYSSRLK-------------VSNILLDKDINPKISDFGMAR--ICGGNELQA 226
R LL +S+ + + N+LL KI DFG+AR + N +
Sbjct: 166 RDLLHFSSQVAQGMAFLASKNCIHRDVAARNVLLTNGHVAKIGDFGLARDIMNDSNYIVK 225
Query: 227 NTSRIVGTYGYMSPEYAIQGIFSIKSDVFSFGVLLLEIVS 266
+R+ +M+PE +++++SDV+S+G+LL EI S
Sbjct: 226 GNARL--PVKWMAPESIFDCVYTVQSDVWSYGILLWEIFS 263
>pdb|3LMG|A Chain A, Crystal Structure Of The Erbb3 Kinase Domain In Complex
With Amp-Pnp
pdb|3LMG|B Chain B, Crystal Structure Of The Erbb3 Kinase Domain In Complex
With Amp-Pnp
Length = 344
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 52/197 (26%), Positives = 93/197 (47%), Gaps = 32/197 (16%)
Query: 97 LGEGGFGPVYKGV-LKKGDEI----AVKRLPGRSG-QGLREMKNEASVIAKVQHKNLVRL 150
LG G FG V+KGV + +G+ I +K + +SG Q + + + I + H ++VRL
Sbjct: 39 LGSGVFGTVHKGVWIPEGESIKIPVCIKVIEDKSGRQSFQAVTDHMLAIGSLDHAHIVRL 98
Query: 151 LGCCIDKDEKILIYEYMPNKSLDFFLFDPTKR--------MLLDWSANYSS--------- 193
LG C + L+ +Y+P SL D ++ +LL+W +
Sbjct: 99 LGLCPGSSLQ-LVTQYLPLGSL----LDHVRQHRGALGPQLLLNWGVQIAKGMYYLEEHG 153
Query: 194 ----RLKVSNILLDKDINPKISDFGMARICGGNELQANTSRIVGTYGYMSPEYAIQGIFS 249
L N+LL +++DFG+A + ++ Q S +M+ E G ++
Sbjct: 154 MVHRNLAARNVLLKSPSQVQVADFGVADLLPPDDKQLLYSEAKTPIKWMALESIHFGKYT 213
Query: 250 IKSDVFSFGVLLLEIVS 266
+SDV+S+GV + E+++
Sbjct: 214 HQSDVWSYGVTVWELMT 230
>pdb|3KEX|A Chain A, Crystal Structure Of The Catalytically Inactive Kinase
Domain Of The Human Epidermal Growth Factor Receptor 3
(Her3)
pdb|3KEX|B Chain B, Crystal Structure Of The Catalytically Inactive Kinase
Domain Of The Human Epidermal Growth Factor Receptor 3
(Her3)
Length = 325
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 52/197 (26%), Positives = 93/197 (47%), Gaps = 32/197 (16%)
Query: 97 LGEGGFGPVYKGV-LKKGDEI----AVKRLPGRSG-QGLREMKNEASVIAKVQHKNLVRL 150
LG G FG V+KGV + +G+ I +K + +SG Q + + + I + H ++VRL
Sbjct: 21 LGSGVFGTVHKGVWIPEGESIKIPVCIKVIEDKSGRQSFQAVTDHMLAIGSLDHAHIVRL 80
Query: 151 LGCCIDKDEKILIYEYMPNKSLDFFLFDPTKR--------MLLDWSANYSS--------- 193
LG C + L+ +Y+P SL D ++ +LL+W +
Sbjct: 81 LGLCPGSSLQ-LVTQYLPLGSL----LDHVRQHRGALGPQLLLNWGVQIAKGMYYLEEHG 135
Query: 194 ----RLKVSNILLDKDINPKISDFGMARICGGNELQANTSRIVGTYGYMSPEYAIQGIFS 249
L N+LL +++DFG+A + ++ Q S +M+ E G ++
Sbjct: 136 MVHRNLAARNVLLKSPSQVQVADFGVADLLPPDDKQLLYSEAKTPIKWMALESIHFGKYT 195
Query: 250 IKSDVFSFGVLLLEIVS 266
+SDV+S+GV + E+++
Sbjct: 196 HQSDVWSYGVTVWELMT 212
>pdb|2OGV|A Chain A, Crystal Structure Of The Autoinhibited Human C-Fms Kinase
Domain
Length = 317
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 59/214 (27%), Positives = 95/214 (44%), Gaps = 38/214 (17%)
Query: 89 NKFSDANKLGEGGFGPVYKGV---LKKGD---EIAVKRLPGRSGQGLRE-MKNEASVIAK 141
N LG G FG V + L K D ++AVK L + +E + +E +++
Sbjct: 38 NNLQFGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSH 97
Query: 142 V-QHKNLVRLLGCCIDKDEKILIYEYMPNKSLDFFLFDPTK-------------RMLLDW 187
+ QH+N+V LLG C ++I EY L FL + R LL +
Sbjct: 98 LGQHENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKAEADLDKEDGRPLELRDLLHF 157
Query: 188 SANYSSRLK-------------VSNILLDKDINPKISDFGMAR--ICGGNELQANTSRIV 232
S+ + + N+LL KI DFG+AR + N + +R+
Sbjct: 158 SSQVAQGMAFLASKNCIHRDVAARNVLLTNGHVAKIGDFGLARDIMNDSNYIVKGNARL- 216
Query: 233 GTYGYMSPEYAIQGIFSIKSDVFSFGVLLLEIVS 266
+M+PE +++++SDV+S+G+LL EI S
Sbjct: 217 -PVKWMAPESIFDCVYTVQSDVWSYGILLWEIFS 249
>pdb|2JED|A Chain A, The Crystal Structure Of The Kinase Domain Of The Protein
Kinase C Theta In Complex With Nvp-Xaa228 At 2.32a
Resolution.
pdb|2JED|B Chain B, The Crystal Structure Of The Kinase Domain Of The Protein
Kinase C Theta In Complex With Nvp-Xaa228 At 2.32a
Resolution
Length = 352
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 59/210 (28%), Positives = 95/210 (45%), Gaps = 29/210 (13%)
Query: 83 SVSTATNKFSDANKLGEGGFGPVYKGVLKKGDEI-AVKRLPGRSGQGLREMKNEASVIAK 141
+ F LG+G FG V+ KK ++ A+K L + L + E +++ K
Sbjct: 12 QIKLKIEDFELHKMLGKGSFGKVFLAEFKKTNQFFAIKAL--KKDVVLMDDDVECTMVEK 69
Query: 142 ------VQHKNLVRLLGCCIDKDEKILIYEYMPNKSLDFFL-----FDPTK------RML 184
+H L + K+ + EY+ L + + FD ++ ++
Sbjct: 70 RVLSLAWEHPFLTHMFCTFQTKENLFFVMEYLNGGDLMYHIQSCHKFDLSRATFYAAEII 129
Query: 185 LDWSANYSS-----RLKVSNILLDKDINPKISDFGMARICGGNEL-QANTSRIVGTYGYM 238
L +S LK+ NILLDKD + KI+DFGM C N L A T+ GT Y+
Sbjct: 130 LGLQFLHSKGIVYRDLKLDNILLDKDGHIKIADFGM---CKENMLGDAKTNEFCGTPDYI 186
Query: 239 SPEYAIQGIFSIKSDVFSFGVLLLEIVSGK 268
+PE + ++ D +SFGVLL E++ G+
Sbjct: 187 APEILLGQKYNHSVDWWSFGVLLYEMLIGQ 216
>pdb|3LCD|A Chain A, Inhibitor Bound To A Dfg-In Structure Of The Kinase Domain
Of Csf-1r
Length = 329
Score = 59.7 bits (143), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 59/214 (27%), Positives = 95/214 (44%), Gaps = 38/214 (17%)
Query: 89 NKFSDANKLGEGGFGPVYKGV---LKKGD---EIAVKRLPGRSGQGLRE-MKNEASVIAK 141
N LG G FG V + L K D ++AVK L + +E + +E +++
Sbjct: 46 NNLQFGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSH 105
Query: 142 V-QHKNLVRLLGCCIDKDEKILIYEYMPNKSLDFFLFDPTK-------------RMLLDW 187
+ QH+N+V LLG C ++I EY L FL + R LL +
Sbjct: 106 LGQHENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKAEADLDKEDGRPLELRDLLHF 165
Query: 188 SANYSSRLK-------------VSNILLDKDINPKISDFGMAR--ICGGNELQANTSRIV 232
S+ + + N+LL KI DFG+AR + N + +R+
Sbjct: 166 SSQVAQGMAFLASKNCIHRDVAARNVLLTNGHVAKIGDFGLARDIMNDSNYIVKGNARL- 224
Query: 233 GTYGYMSPEYAIQGIFSIKSDVFSFGVLLLEIVS 266
+M+PE +++++SDV+S+G+LL EI S
Sbjct: 225 -PVKWMAPESIFDCVYTVQSDVWSYGILLWEIFS 257
>pdb|3CD3|A Chain A, Crystal Structure Of Phosphorylated Human Feline Sarcoma
Viral Oncogene Homologue (V-Fes) In Complex With
Staurosporine And A Consensus Peptide
Length = 377
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 55/194 (28%), Positives = 86/194 (44%), Gaps = 23/194 (11%)
Query: 94 ANKLGEGGFGPVYKGVLKKGDE-IAVKRLPGRSGQGLR-EMKNEASVIAKVQHKNLVRLL 151
++G G FG V+ G L+ + +AVK L+ + EA ++ + H N+VRL+
Sbjct: 119 GEQIGRGNFGEVFSGRLRADNTLVAVKSCRETLPPDLKAKFLQEARILKQYSHPNIVRLI 178
Query: 152 GCCIDKDEKILIYEYMPNKSLDFFLFDPTK----------RMLLDWSANY---------S 192
G C K ++ E + + DF F T+ +M+ D +A
Sbjct: 179 GVCTQKQPIYIVMELV--QGGDFLTFLRTEGARLRVKTLLQMVGDAAAGMEYLESKCCIH 236
Query: 193 SRLKVSNILLDKDINPKISDFGMARICGGNELQANTSRIVGTYGYMSPEYAIQGIFSIKS 252
L N L+ + KISDFGM+R A+ + +PE G +S +S
Sbjct: 237 RDLAARNCLVTEKNVLKISDFGMSREEADGVXAASGGLRQVPVKWTAPEALNYGRYSSES 296
Query: 253 DVFSFGVLLLEIVS 266
DV+SFG+LL E S
Sbjct: 297 DVWSFGILLWETFS 310
>pdb|3ORX|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|B Chain B, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|C Chain C, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|D Chain D, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|E Chain E, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|F Chain F, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|G Chain G, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|H Chain H, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORZ|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|B Chain B, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|C Chain C, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|D Chain D, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3OTU|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator Js30
Length = 316
Score = 59.3 bits (142), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 55/199 (27%), Positives = 86/199 (43%), Gaps = 24/199 (12%)
Query: 91 FSDANKLGEGGFGPVYKG-VLKKGDEIAVKRLPGRSGQGLREMK-----NEASVIAKVQH 144
F LGEG F V L E A+K L R ++E K E V++++ H
Sbjct: 39 FKFGKILGEGSFSTVVLARELATSREYAIKILEKR--HIIKENKVPYVTRERDVMSRLDH 96
Query: 145 KNLVRLLGCCIDKDEKILIYEYMPNKSLDFFL-----FDPTKRML-----------LDWS 188
V+L C D ++ Y N L ++ FD T L
Sbjct: 97 PFFVKLYFCFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGK 156
Query: 189 ANYSSRLKVSNILLDKDINPKISDFGMARICGGNELQANTSRIVGTYGYMSPEYAIQGIF 248
LK NILL++D++ +I+DFG A++ QA + VGT Y+SPE +
Sbjct: 157 GIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSA 216
Query: 249 SIKSDVFSFGVLLLEIVSG 267
SD+++ G ++ ++V+G
Sbjct: 217 CKSSDLWALGCIIYQLVAG 235
>pdb|3BKB|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (V- Fes)
pdb|3CBL|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (v- Fes) In Complex With Staurosporine And A
Consensus Peptide
pdb|4E93|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (V- Fes)in Complex With Tae684
Length = 377
Score = 59.3 bits (142), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 55/194 (28%), Positives = 86/194 (44%), Gaps = 23/194 (11%)
Query: 94 ANKLGEGGFGPVYKGVLKKGDE-IAVKRLPGRSGQGLR-EMKNEASVIAKVQHKNLVRLL 151
++G G FG V+ G L+ + +AVK L+ + EA ++ + H N+VRL+
Sbjct: 119 GEQIGRGNFGEVFSGRLRADNTLVAVKSCRETLPPDLKAKFLQEARILKQYSHPNIVRLI 178
Query: 152 GCCIDKDEKILIYEYMPNKSLDFFLFDPTK----------RMLLDWSANY---------S 192
G C K ++ E + + DF F T+ +M+ D +A
Sbjct: 179 GVCTQKQPIYIVMELV--QGGDFLTFLRTEGARLRVKTLLQMVGDAAAGMEYLESKCCIH 236
Query: 193 SRLKVSNILLDKDINPKISDFGMARICGGNELQANTSRIVGTYGYMSPEYAIQGIFSIKS 252
L N L+ + KISDFGM+R A+ + +PE G +S +S
Sbjct: 237 RDLAARNCLVTEKNVLKISDFGMSREEADGVYAASGGLRQVPVKWTAPEALNYGRYSSES 296
Query: 253 DVFSFGVLLLEIVS 266
DV+SFG+LL E S
Sbjct: 297 DVWSFGILLWETFS 310
>pdb|2OZO|A Chain A, Autoinhibited Intact Human Zap-70
Length = 613
Score = 59.3 bits (142), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 57/194 (29%), Positives = 91/194 (46%), Gaps = 25/194 (12%)
Query: 96 KLGEGGFGPVYKGVL---KKGDEIAVKRL-PGRSGQGLREMKNEASVIAKVQHKNLVRLL 151
+LG G FG V +GV KK ++A+K L G EM EA ++ ++ + +VRL+
Sbjct: 343 ELGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGTEKADTEEMMREAQIMHQLDNPYIVRLI 402
Query: 152 GCCIDKDEKILIYEYMPNKSLDFFLFDPTKRMLLDWSA----------------NYSSR- 194
G C + +L+ E L FL + + + A N+ R
Sbjct: 403 GVC-QAEALMLVMEMAGGGPLHKFLVGKREEIPVSNVAELLHQVSMGMKYLEEKNFVHRN 461
Query: 195 LKVSNILLDKDINPKISDFGMARICGGNELQANTSRIVGTY--GYMSPEYAIQGIFSIKS 252
L N+LL KISDFG+++ G ++ T+R G + + +PE FS +S
Sbjct: 462 LAARNVLLVNRHYAKISDFGLSKALGADD-SYYTARSAGKWPLKWYAPECINFRKFSSRS 520
Query: 253 DVFSFGVLLLEIVS 266
DV+S+GV + E +S
Sbjct: 521 DVWSYGVTMWEALS 534
>pdb|1XJD|A Chain A, Crystal Structure Of Pkc-Theta Complexed With
Staurosporine At 2a Resolution
Length = 345
Score = 59.3 bits (142), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 58/196 (29%), Positives = 93/196 (47%), Gaps = 29/196 (14%)
Query: 97 LGEGGFGPVYKGVLKKGDEI-AVKRLPGRSGQGLREMKNEASVIAK------VQHKNLVR 149
LG+G FG V+ KK ++ A+K L + L + E +++ K +H L
Sbjct: 25 LGKGSFGKVFLAEFKKTNQFFAIKAL--KKDVVLMDDDVECTMVEKRVLSLAWEHPFLTH 82
Query: 150 LLGCCIDKDEKILIYEYMPNKSLDFFL-----FDPTK------RMLLDWSANYSS----- 193
+ K+ + EY+ L + + FD ++ ++L +S
Sbjct: 83 MFCTFQTKENLFFVMEYLNGGDLMYHIQSCHKFDLSRATFYAAEIILGLQFLHSKGIVYR 142
Query: 194 RLKVSNILLDKDINPKISDFGMARICGGNEL-QANTSRIVGTYGYMSPEYAIQGIFSIKS 252
LK+ NILLDKD + KI+DFGM C N L A T+ GT Y++PE + ++
Sbjct: 143 DLKLDNILLDKDGHIKIADFGM---CKENMLGDAKTNXFCGTPDYIAPEILLGQKYNHSV 199
Query: 253 DVFSFGVLLLEIVSGK 268
D +SFGVLL E++ G+
Sbjct: 200 DWWSFGVLLYEMLIGQ 215
>pdb|4H1J|A Chain A, Crystal Structure Of Pyk2 With The Pyrazole 13a
pdb|4H1M|A Chain A, Crystal Structure Of Pyk2 With The Indole 10c
Length = 293
Score = 59.3 bits (142), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 74/271 (27%), Positives = 116/271 (42%), Gaps = 45/271 (16%)
Query: 97 LGEGGFGPVYKGVL--KKGDEIAVKRLPGRSGQGL---REMKNEASVIAKVQHKNLVRLL 151
LGEG FG VY+GV KG++I V + L + +EA ++ + H ++V+L+
Sbjct: 32 LGEGFFGEVYEGVYTNHKGEKINVAVKTCKKDCTLDNKEKFMSEAVIMKNLDHPHIVKLI 91
Query: 152 GCCIDKDEKILIYEYMPNKSLDFFL----------------FDPTKRMLLDWSANYSSR- 194
G I+++ +I E P L +L K M S N R
Sbjct: 92 GI-IEEEPTWIIMELYPYGELGHYLERNKNSLKVLTLVLYSLQICKAMAYLESINCVHRD 150
Query: 195 LKVSNILLDKDINPKISDFGMAR-ICGGNELQANTSRIVGTYGYMSPEYAIQGIFSIKSD 253
+ V NIL+ K+ DFG++R I + +A+ +R+ +MSPE F+ SD
Sbjct: 151 IAVRNILVASPECVKLGDFGLSRYIEDEDYYKASVTRL--PIKWMSPESINFRRFTTASD 208
Query: 254 VFSFGVLLLEIVSGKKTTGFYRTDSLTLLGYAWDLWTSNRTLELIDPILEDEYSSKHMLL 313
V+ F V + EI+S K F W N+ ++I + + + K L
Sbjct: 209 VWMFAVCMWEILSFGKQPFF---------------WLENK--DVIGVLEKGDRLPKPDLC 251
Query: 314 RYVNIALL--CVQESADDRPTMNEVVSMLTD 342
V L+ C DRP E+V L+D
Sbjct: 252 PPVLYTLMTRCWDYDPSDRPRFTELVCSLSD 282
>pdb|3FZO|A Chain A, Crystal Structure Of Pyk2-Apo, Proline-Rich Tyrosine
Kinase
pdb|3FZP|A Chain A, Crystal Structure Of Pyk2 Complexed With Atpgs
pdb|3FZR|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-431396
pdb|3FZS|A Chain A, Crystal Structure Of Pyk2 Complexed With Birb796
pdb|3FZT|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-4618433
pdb|3H3C|A Chain A, Crystal Structure Of Pyk2 In Complex With Sulfoximine-
Substituted Trifluoromethylpyrimidine Analog
pdb|3ET7|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-2318841
Length = 277
Score = 59.3 bits (142), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 74/271 (27%), Positives = 116/271 (42%), Gaps = 45/271 (16%)
Query: 97 LGEGGFGPVYKGVL--KKGDEIAVKRLPGRSGQGL---REMKNEASVIAKVQHKNLVRLL 151
LGEG FG VY+GV KG++I V + L + +EA ++ + H ++V+L+
Sbjct: 16 LGEGFFGEVYEGVYTNHKGEKINVAVKTCKKDCTLDNKEKFMSEAVIMKNLDHPHIVKLI 75
Query: 152 GCCIDKDEKILIYEYMPNKSLDFFL----------------FDPTKRMLLDWSANYSSR- 194
G I+++ +I E P L +L K M S N R
Sbjct: 76 GI-IEEEPTWIIMELYPYGELGHYLERNKNSLKVLTLVLYSLQICKAMAYLESINCVHRD 134
Query: 195 LKVSNILLDKDINPKISDFGMAR-ICGGNELQANTSRIVGTYGYMSPEYAIQGIFSIKSD 253
+ V NIL+ K+ DFG++R I + +A+ +R+ +MSPE F+ SD
Sbjct: 135 IAVRNILVASPECVKLGDFGLSRYIEDEDYYKASVTRL--PIKWMSPESINFRRFTTASD 192
Query: 254 VFSFGVLLLEIVSGKKTTGFYRTDSLTLLGYAWDLWTSNRTLELIDPILEDEYSSKHMLL 313
V+ F V + EI+S K F W N+ ++I + + + K L
Sbjct: 193 VWMFAVCMWEILSFGKQPFF---------------WLENK--DVIGVLEKGDRLPKPDLC 235
Query: 314 RYVNIALL--CVQESADDRPTMNEVVSMLTD 342
V L+ C DRP E+V L+D
Sbjct: 236 PPVLYTLMTRCWDYDPSDRPRFTELVCSLSD 266
>pdb|1LUF|A Chain A, Crystal Structure Of The Musk Tyrosine Kinase: Insights
Into Receptor Autoregulation
Length = 343
Score = 59.3 bits (142), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 56/226 (24%), Positives = 103/226 (45%), Gaps = 49/226 (21%)
Query: 89 NKFSDANKLGEGGFGPVYK----GVL--KKGDEIAVKRLPGRSGQGLR-EMKNEASVIAK 141
N +GEG FG V++ G+L + +AVK L + ++ + + EA+++A+
Sbjct: 47 NNIEYVRDIGEGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEASADMQADFQREAALMAE 106
Query: 142 VQHKNLVRLLGCCIDKDEKILIYEYMPNKSLDFFLFDPTKRMLLDWS-ANYSSRLKVS-- 198
+ N+V+LLG C L++EYM L+ FL + + S ++ S+R +VS
Sbjct: 107 FDNPNIVKLLGVCAVGKPMCLLFEYMAYGDLNEFLRSMSPHTVCSLSHSDLSTRARVSSP 166
Query: 199 -------------------------------------NILLDKDINPKISDFGMAR-ICG 220
N L+ +++ KI+DFG++R I
Sbjct: 167 GPPPLSCAEQLCIARQVAAGMAYLSERKFVHRDLATRNCLVGENMVVKIADFGLSRNIYS 226
Query: 221 GNELQANTSRIVGTYGYMSPEYAIQGIFSIKSDVFSFGVLLLEIVS 266
+ +A+ + + +M PE ++ +SDV+++GV+L EI S
Sbjct: 227 ADYYKADGNDAIPI-RWMPPESIFYNRYTTESDVWAYGVVLWEIFS 271
>pdb|3CC6|A Chain A, Crystal Structure Of Kinase Domain Of Protein Tyrosine
Kinase 2 Beta (ptk2b)
Length = 281
Score = 58.9 bits (141), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 74/271 (27%), Positives = 116/271 (42%), Gaps = 45/271 (16%)
Query: 97 LGEGGFGPVYKGVL--KKGDEIAVKRLPGRSGQGL---REMKNEASVIAKVQHKNLVRLL 151
LGEG FG VY+GV KG++I V + L + +EA ++ + H ++V+L+
Sbjct: 20 LGEGFFGEVYEGVYTNHKGEKINVAVKTCKKDCTLDNKEKFMSEAVIMKNLDHPHIVKLI 79
Query: 152 GCCIDKDEKILIYEYMPNKSLDFFL----------------FDPTKRMLLDWSANYSSR- 194
G I+++ +I E P L +L K M S N R
Sbjct: 80 GI-IEEEPTWIIMELYPYGELGHYLERNKNSLKVLTLVLYSLQICKAMAYLESINCVHRD 138
Query: 195 LKVSNILLDKDINPKISDFGMAR-ICGGNELQANTSRIVGTYGYMSPEYAIQGIFSIKSD 253
+ V NIL+ K+ DFG++R I + +A+ +R+ +MSPE F+ SD
Sbjct: 139 IAVRNILVASPECVKLGDFGLSRYIEDEDYYKASVTRL--PIKWMSPESINFRRFTTASD 196
Query: 254 VFSFGVLLLEIVSGKKTTGFYRTDSLTLLGYAWDLWTSNRTLELIDPILEDEYSSKHMLL 313
V+ F V + EI+S K F W N+ ++I + + + K L
Sbjct: 197 VWMFAVCMWEILSFGKQPFF---------------WLENK--DVIGVLEKGDRLPKPDLC 239
Query: 314 RYVNIALL--CVQESADDRPTMNEVVSMLTD 342
V L+ C DRP E+V L+D
Sbjct: 240 PPVLYTLMTRCWDYDPSDRPRFTELVCSLSD 270
>pdb|1U59|A Chain A, Crystal Structure Of The Zap-70 Kinase Domain In Complex
With Staurosporine
Length = 287
Score = 58.9 bits (141), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 57/194 (29%), Positives = 91/194 (46%), Gaps = 25/194 (12%)
Query: 96 KLGEGGFGPVYKGVL---KKGDEIAVKRLP-GRSGQGLREMKNEASVIAKVQHKNLVRLL 151
+LG G FG V +GV KK ++A+K L G EM EA ++ ++ + +VRL+
Sbjct: 17 ELGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGTEKADTEEMMREAQIMHQLDNPYIVRLI 76
Query: 152 GCCIDKDEKILIYEYMPNKSLDFFLFDPTKRMLLDWSA----------------NYSSR- 194
G C + +L+ E L FL + + + A N+ R
Sbjct: 77 GVC-QAEALMLVMEMAGGGPLHKFLVGKREEIPVSNVAELLHQVSMGMKYLEEKNFVHRD 135
Query: 195 LKVSNILLDKDINPKISDFGMARICGGNELQANTSRIVGTY--GYMSPEYAIQGIFSIKS 252
L N+LL KISDFG+++ G ++ T+R G + + +PE FS +S
Sbjct: 136 LAARNVLLVNRHYAKISDFGLSKALGADD-SYYTARSAGKWPLKWYAPECINFRKFSSRS 194
Query: 253 DVFSFGVLLLEIVS 266
DV+S+GV + E +S
Sbjct: 195 DVWSYGVTMWEALS 208
>pdb|2PVY|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|C Chain C, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|D Chain D, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome
Length = 324
Score = 58.9 bits (141), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 58/220 (26%), Positives = 96/220 (43%), Gaps = 42/220 (19%)
Query: 89 NKFSDANKLGEGGFGPVY--------KGVLKKGDEIAVKRLPGRSGQ-GLREMKNEASVI 139
+K + LGEG FG V K K+ +AVK L + + L ++ +E ++
Sbjct: 35 DKLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMM 94
Query: 140 AKV-QHKNLVRLLGCCIDKDEKILIYEYMPNKSLDFFL-----------FD----PTKRM 183
+ +HKN++ LLG C +I EY +L +L +D P ++M
Sbjct: 95 KMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQM 154
Query: 184 LLD--WSANYS---------------SRLKVSNILLDKDINPKISDFGMARICGGNELQA 226
S Y L N+L+ ++ KI+DFG+AR +
Sbjct: 155 TFKDLVSCTYQLARGMEYLASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYK 214
Query: 227 NTSRIVGTYGYMSPEYAIQGIFSIKSDVFSFGVLLLEIVS 266
NT+ +M+PE +++ +SDV+SFGVL+ EI +
Sbjct: 215 NTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 254
>pdb|1GZ8|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 2-Amino-6-(3'-Methyl-2'-Oxo)butoxypurine
pdb|2R3Q|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3M|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3I|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3N|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3O|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3P|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3K|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3J|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3L|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|1W8C|A Chain A, Co-crystal Structure Of
6-cyclohexylmethoxy-8-isopropyl-9h- Purin-2-ylamine And
Monomeric Cdk2
Length = 299
Score = 58.5 bits (140), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 52/203 (25%), Positives = 97/203 (47%), Gaps = 31/203 (15%)
Query: 91 FSDANKLGEGGFGPVYKGVLK-KGDEIAVKRL------PGRSGQGLREMKNEASVIAKVQ 143
F K+GEG +G VYK K G+ +A+K++ G +RE+ S++ ++
Sbjct: 5 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREI----SLLKELN 60
Query: 144 HKNLVRLLGCCIDKDEKILIYEYM----------------PNKSLDFFLFDPTKRMLLDW 187
H N+V+LL +++ L++E++ P + +LF + +
Sbjct: 61 HPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCH 120
Query: 188 SANYSSR-LKVSNILLDKDINPKISDFGMARICGGNELQANTSRIVGTYGYMSPEYAI-Q 245
S R LK N+L++ + K++DFG+AR G ++ T +V T Y +PE +
Sbjct: 121 SHRVLHRDLKPQNLLINTEGAIKLADFGLAR-AFGVPVRTYTHEVV-TLWYRAPEILLGX 178
Query: 246 GIFSIKSDVFSFGVLLLEIVSGK 268
+S D++S G + E+V+ +
Sbjct: 179 KYYSTAVDIWSLGCIFAEMVTRR 201
>pdb|4F0F|A Chain A, Crystal Structure Of The Roco4 Kinase Domain Bound To
Appcp From D. Discoideum
pdb|4F0G|A Chain A, Crystal Structure Of The Roco4 Kinase Domain From D.
Discoideum
pdb|4F1T|A Chain A, Crystal Structure Of The Roco4 Kinase Domain From D.
Discoideum Bound To The Rock Inhibitor H1152
Length = 287
Score = 58.5 bits (140), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 65/292 (22%), Positives = 127/292 (43%), Gaps = 54/292 (18%)
Query: 85 STATNKFSDANKLGEGGFGPVYKGVLKKGDE-IAVKRLPGRSGQG-------LREMKNEA 136
+ A N+ ++G+GGFG V+KG L K +A+K L +G +E + E
Sbjct: 15 TLADNEIEYEKQIGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQREV 74
Query: 137 SVIAKVQHKNLVRLLGCCIDKDEKILIYEYMPNKSLDFFLFD---PTK-----RMLLDWS 188
+++ + H N+V+L G + ++ E++P L L D P K R++LD +
Sbjct: 75 FIMSNLNHPNIVKLYGLMHNPPR--MVMEFVPCGDLYHRLLDKAHPIKWSVKLRLMLDIA 132
Query: 189 AN-----------YSSRLKVSNILL-----DKDINPKISDFGMARICGGNELQANTSRIV 232
L+ NI L + + K++DFG+++ + + S ++
Sbjct: 133 LGIEYMQNQNPPIVHRDLRSPNIFLQSLDENAPVCAKVADFGLSQ-----QSVHSVSGLL 187
Query: 233 GTYGYMSPEY--AIQGIFSIKSDVFSFGVLLLEIVSGKKTTGFYRTDSLTLLGYAWDLWT 290
G + +M+PE A + ++ K+D +SF ++L I++G+ Y + + +
Sbjct: 188 GNFQWMAPETIGAEEESYTEKADTYSFAMILYTILTGEGPFDEYSYGKIKFINMIRE--- 244
Query: 291 SNRTLELIDPILEDEYSSKHMLLRYVNIALLCVQESADDRPTMNEVVSMLTD 342
E + P + ++ R N+ LC RP + +V L++
Sbjct: 245 -----EGLRPTIPEDCPP-----RLRNVIELCWSGDPKKRPHFSYIVKELSE 286
>pdb|3CJF|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
3,4,5-Trimethoxy Aniline Containing Pyrimidine
Length = 309
Score = 58.5 bits (140), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 66/238 (27%), Positives = 97/238 (40%), Gaps = 45/238 (18%)
Query: 74 DQLPL--------FSFSSVSTATNKFSDANKLGEGGFGPVYK----GVLKKGDE--IAVK 119
D+LPL + S ++ + LG G FG V + G+ K +AVK
Sbjct: 4 DELPLDEHCERLPYDASKWEFPRDRLNLGKPLGRGAFGQVIEADAFGIDKTATXRTVAVK 63
Query: 120 RL-PGRSGQGLREMKNEASVIAKV-QHKNLVRLLGCCIDKDEKILIY------------- 164
L G + R + +E ++ + H N+V LLG C +++
Sbjct: 64 MLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYL 123
Query: 165 -----EYMPNKSL--DF--------FLFDPTKRMLLDWSANYSSR-LKVSNILLDKDINP 208
E++P K L DF + F K M S R L NILL +
Sbjct: 124 RSKRNEFVPYKDLYKDFLTLEHLIXYSFQVAKGMEFLASRKXIHRDLAARNILLSEKNVV 183
Query: 209 KISDFGMARICGGNELQANTSRIVGTYGYMSPEYAIQGIFSIKSDVFSFGVLLLEIVS 266
KI DFG+AR + +M+PE +++I+SDV+SFGVLL EI S
Sbjct: 184 KIXDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 241
>pdb|3CJG|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
3,4,5-Trimethoxy Aniline Containing Pyrimidine
Length = 309
Score = 58.5 bits (140), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 66/238 (27%), Positives = 97/238 (40%), Gaps = 45/238 (18%)
Query: 74 DQLPL--------FSFSSVSTATNKFSDANKLGEGGFGPVYK----GVLKKGDE--IAVK 119
D+LPL + S ++ + LG G FG V + G+ K +AVK
Sbjct: 4 DELPLDEHCERLPYDASKWEFPRDRLNLGKPLGRGAFGQVIEADAFGIDKTATXRTVAVK 63
Query: 120 RL-PGRSGQGLREMKNEASVIAKV-QHKNLVRLLGCCIDKDEKILIY------------- 164
L G + R + +E ++ + H N+V LLG C +++
Sbjct: 64 MLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYL 123
Query: 165 -----EYMPNKSL--DF--------FLFDPTKRMLLDWSANYSSR-LKVSNILLDKDINP 208
E++P K L DF + F K M S R L NILL +
Sbjct: 124 RSKRNEFVPYKDLYKDFLTLEHLICYSFQVAKGMEFLASRKXIHRDLAARNILLSEKNVV 183
Query: 209 KISDFGMARICGGNELQANTSRIVGTYGYMSPEYAIQGIFSIKSDVFSFGVLLLEIVS 266
KI DFG+AR + +M+PE +++I+SDV+SFGVLL EI S
Sbjct: 184 KICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 241
>pdb|3GGF|A Chain A, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
Mst4 In Complex With An Quinazolin
pdb|3GGF|B Chain B, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
Mst4 In Complex With An Quinazolin
Length = 301
Score = 58.5 bits (140), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 45/195 (23%), Positives = 95/195 (48%), Gaps = 19/195 (9%)
Query: 91 FSDANKLGEGGFGPVYKGVLKKGDEIAVKRLPG--RSGQGLREMKNEASVIAKVQHKNLV 148
F+ ++G+G FG V+KG+ + ++ ++ + + +++ E +V+++ +
Sbjct: 25 FTKLERIGKGSFGEVFKGIDNRTQQVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSSYVT 84
Query: 149 RLLGCCIDKDEKILIYEYMPNKS-LDFFLFDP---------TKRMLLDWSANYSSR---- 194
+ G + + +I EY+ S LD P K +L +S +
Sbjct: 85 KYYGSYLKGSKLWIIMEYLGGGSALDLLRAGPFDEFQIATMLKEILKGLDYLHSEKKIHR 144
Query: 195 -LKVSNILLDKDINPKISDFGMARICGGNELQANTSRIVGTYGYMSPEYAIQGIFSIKSD 253
+K +N+LL + + K++DFG+A +++ NT VGT +M+PE Q + K+D
Sbjct: 145 DIKAANVLLSEQGDVKLADFGVAGQLTDTQIKRNT--FVGTPFWMAPEVIQQSAYDSKAD 202
Query: 254 VFSFGVLLLEIVSGK 268
++S G+ +E+ G+
Sbjct: 203 IWSLGITAIELAKGE 217
>pdb|1PF8|A Chain A, Crystal Structure Of Human Cyclin-dependent Kinase 2
Complexed With A Nucleoside Inhibitor
Length = 298
Score = 58.2 bits (139), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 52/203 (25%), Positives = 97/203 (47%), Gaps = 31/203 (15%)
Query: 91 FSDANKLGEGGFGPVYKGVLK-KGDEIAVKRL------PGRSGQGLREMKNEASVIAKVQ 143
F K+GEG +G VYK K G+ +A+K++ G +RE+ S++ ++
Sbjct: 4 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREI----SLLKELN 59
Query: 144 HKNLVRLLGCCIDKDEKILIYEYM----------------PNKSLDFFLFDPTKRMLLDW 187
H N+V+LL +++ L++E++ P + +LF + +
Sbjct: 60 HPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCH 119
Query: 188 SANYSSR-LKVSNILLDKDINPKISDFGMARICGGNELQANTSRIVGTYGYMSPEYAIQ- 245
S R LK N+L++ + K++DFG+AR G ++ T +V T Y +PE +
Sbjct: 120 SHRVLHRDLKPQNLLINTEGAIKLADFGLAR-AFGVPVRTYTHEVV-TLWYRAPEILLGC 177
Query: 246 GIFSIKSDVFSFGVLLLEIVSGK 268
+S D++S G + E+V+ +
Sbjct: 178 KYYSTAVDIWSLGCIFAEMVTRR 200
>pdb|1OIT|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-dependent Kinase Inhibitors Identified Through
Structure-based Hybridisation
Length = 299
Score = 58.2 bits (139), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 54/207 (26%), Positives = 100/207 (48%), Gaps = 39/207 (18%)
Query: 91 FSDANKLGEGGFGPVYKGVLK-KGDEIAVKRL------PGRSGQGLREMKNEASVIAKVQ 143
F K+GEG +G VYK K G+ +A+K++ G +RE+ S++ ++
Sbjct: 5 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREI----SLLKELN 60
Query: 144 HKNLVRLLGCCIDKDEKILIYEYM----------------PNKSLDFFLFDPTKRMLLDW 187
H N+V+LL +++ L++E++ P + +LF ++L
Sbjct: 61 HPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLF----QLLQGL 116
Query: 188 SANYSSR-----LKVSNILLDKDINPKISDFGMARICGGNELQANTSRIVGTYGYMSPEY 242
S +S R LK N+L++ + K++DFG+AR G ++ T +V T Y +PE
Sbjct: 117 SFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLAR-AFGVPVRTYTHEVV-TLWYRAPEI 174
Query: 243 AIQ-GIFSIKSDVFSFGVLLLEIVSGK 268
+ +S D++S G + E+V+ +
Sbjct: 175 LLGCKYYSTAVDIWSLGCIFAEMVTRR 201
>pdb|2W17|A Chain A, Cdk2 In Complex With The Imidazole Pyrimidine Amide,
Compound (S)-8b
pdb|3IG7|A Chain A, Novel Cdk-5 Inhibitors - Crystal Structure Of Inhibitor
Efp With Cdk-2
pdb|3IGG|A Chain A, Novel Cdk-5 Inhibitors - Crystal Structure Of Inhibitor
Efq With Cdk-2
pdb|1B38|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|1B39|A Chain A, Human Cyclin-Dependent Kinase 2 Phosphorylated On Thr 160
pdb|1E1V|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Nu2058
pdb|1E1X|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Nu6027
pdb|1H00|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1H07|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1H08|A Chain A, Cdk2 In Complex With A Disubstituted 2, 4-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|2R3R|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|4ACM|A Chain A, Cdk2 In Complex With
3-Amino-6-(4-{[2-(Dimethylamino)ethyl]
Sulfamoyl}-Phenyl)-N-Pyridin-3-Ylpyrazine-2-Carboxamide
pdb|3SW4|A Chain A, Crystal Structure Of The Cdk2 In Complex With
Thiazolylpyrimidine Inhibitor
pdb|3SW7|A Chain A, Crystal Structure Of The Cdk2 In Complex With
Thiazolylpyrimidine Inhibitor
pdb|1OIQ|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-Dependent Kinase Inhibitors Identified Through
Structure-Based Hybridisation
pdb|1V1K|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1URW|A Chain A, Cdk2 In Complex With An Imidazo[1,2-B]pyridazine
pdb|2VV9|A Chain A, Cdk2 In Complex With An Imidazole Piperazine
pdb|2W06|A Chain A, Structure Of Cdk2 In Complex With An Imidazolyl
Pyrimidine, Compound 5c
pdb|2R3G|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3H|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3F|A Chain A, Crystal Structure Of Cyclin-dependent Kinase 2 With
Inhibitor
Length = 299
Score = 58.2 bits (139), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 52/203 (25%), Positives = 97/203 (47%), Gaps = 31/203 (15%)
Query: 91 FSDANKLGEGGFGPVYKGVLK-KGDEIAVKRL------PGRSGQGLREMKNEASVIAKVQ 143
F K+GEG +G VYK K G+ +A+K++ G +RE+ S++ ++
Sbjct: 5 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREI----SLLKELN 60
Query: 144 HKNLVRLLGCCIDKDEKILIYEYM----------------PNKSLDFFLFDPTKRMLLDW 187
H N+V+LL +++ L++E++ P + +LF + +
Sbjct: 61 HPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCH 120
Query: 188 SANYSSR-LKVSNILLDKDINPKISDFGMARICGGNELQANTSRIVGTYGYMSPEYAIQ- 245
S R LK N+L++ + K++DFG+AR G ++ T +V T Y +PE +
Sbjct: 121 SHRVLHRDLKPQNLLINTEGAIKLADFGLAR-AFGVPVRTYTHEVV-TLWYRAPEILLGC 178
Query: 246 GIFSIKSDVFSFGVLLLEIVSGK 268
+S D++S G + E+V+ +
Sbjct: 179 KYYSTAVDIWSLGCIFAEMVTRR 201
>pdb|1FIN|A Chain A, Cyclin A-Cyclin-Dependent Kinase 2 Complex
pdb|1FIN|C Chain C, Cyclin A-Cyclin-Dependent Kinase 2 Complex
pdb|1CKP|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Purvalanol B
pdb|1BUH|A Chain A, Crystal Structure Of The Human Cdk2 Kinase Complex With
Cell Cycle-Regulatory Protein Ckshs1
pdb|1DM2|A Chain A, Human Cyclin-Dependent Kinase 2 Complexed With The
Inhibitor Hymenialdisine
pdb|1DI8|A Chain A, The Structure Of Cyclin-Dependent Kinase 2 (Cdk2) In
Complex With
4-[3-Hydroxyanilino]-6,7-Dimethoxyquinazoline
pdb|1F5Q|A Chain A, Crystal Structure Of Murine Gamma Herpesvirus Cyclin
Complexed To Human Cyclin Dependent Kinase 2
pdb|1F5Q|C Chain C, Crystal Structure Of Murine Gamma Herpesvirus Cyclin
Complexed To Human Cyclin Dependent Kinase 2
pdb|1FVT|A Chain A, The Structure Of Cyclin-Dependent Kinase 2 (Cdk2) In
Complex With An Oxindole Inhibitor
pdb|1FVV|A Chain A, The Structure Of Cdk2CYCLIN A IN COMPLEX WITH AN OXINDOLE
Inhibitor
pdb|1FVV|C Chain C, The Structure Of Cdk2CYCLIN A IN COMPLEX WITH AN OXINDOLE
Inhibitor
pdb|1JSV|A Chain A, The Structure Of Cyclin-dependent Kinase 2 (cdk2) In
Complex With 4-[(6-amino-4-pyrimidinyl)
Amino]benzenesulfonamide
pdb|1G5S|A Chain A, Crystal Structure Of Human Cyclin Dependent Kinase 2
(Cdk2) In Complex With The Inhibitor H717
pdb|1JVP|P Chain P, Crystal Structure Of Human Cdk2 (Unphosphorylated) In
Complex With Pkf049-365
pdb|1GIH|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|1KE5|A Chain A, Cdk2 Complexed With N-methyl-4-{[(2-oxo-1,2-dihydro-3h-
Indol-3-ylidene)methyl]amino}benzenesulfonamide
pdb|1KE6|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With
N-Methyl-{4-
[2-(7-Oxo-6,7-Dihydro-8h-[1,3]thiazolo[5,4-E]indol-8-
Ylidene)hydrazino]phenyl}methanesulfonamide
pdb|1KE7|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With 3-{[(2,2-
Dioxido-1,
3-Dihydro-2-Benzothien-5-Yl)amino]methylene}-5-
(1,3-Oxazol-5-Yl)-1,3-Dihydro-2h-Indol-2-One
pdb|1KE8|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With
4-{[(2-Oxo-
1,2-Dihydro-3h-Indol-3-Ylidene)methyl]amino}-N-(1,3-
Thiazol-2-Yl)benzenesulfonamide
pdb|1KE9|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With 3-{[4-
({[amino(Imino)methyl]aminosulfonyl)anilino]methylene}-
2- Oxo-2,3-Dihydro-1h-Indole
pdb|1H0V|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor
2-Amino-6-[(R)-Pyrrolidino-5'-Yl]methoxypurine
pdb|1H0W|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 2-Amino-6-[cyclohex-3-Enyl]methoxypurine
pdb|1P2A|A Chain A, The Structure Of Cyclin Dependent Kinase 2 (Ckd2) With A
Trisubstituted Naphthostyril Inhibitor
pdb|1OKV|A Chain A, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Ile-Phe-Nh2
pdb|1OKV|C Chain C, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Ile-Phe-Nh2
pdb|1OKW|A Chain A, Cyclin A Binding Groove Inhibitor
Ac-Arg-Arg-Leu-Asn-(M-Cl-Phe)-Nh2
pdb|1OKW|C Chain C, Cyclin A Binding Groove Inhibitor
Ac-Arg-Arg-Leu-Asn-(M-Cl-Phe)-Nh2
pdb|1OL1|A Chain A, Cyclin A Binding Groove Inhibitor
H-Cit-Cit-Leu-Ile-(P-F-Phe)-Nh2
pdb|1OL1|C Chain C, Cyclin A Binding Groove Inhibitor
H-Cit-Cit-Leu-Ile-(P-F-Phe)-Nh2
pdb|1OL2|A Chain A, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Asn-(P-F-Phe)-Nh2
pdb|1OL2|C Chain C, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Asn-(P-F-Phe)-Nh2
pdb|1PW2|A Chain A, Apo Structure Of Human Cyclin-Dependent Kinase 2
pdb|1PXI|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 4-(2,5-dichloro-thiophen-3-yl)-pyrimidin-2-
Ylamine
pdb|1PXJ|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-Ylamine
pdb|1PXK|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
N-[4-(2,4-dimethyl-thiazol-5-yl)pyrimidin-2-yl]-
N'-hydroxyiminoformamide
pdb|1PXL|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
[4-(2,4-dimethyl-thiazol-5-yl)-pyrimidin-2-yl]-
(4-trifluoromethyl-phenyl)-amine
pdb|1R78|A Chain A, Cdk2 Complex With A 4-alkynyl Oxindole Inhibitor
pdb|1PXM|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 3-[4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-
Ylamino]-Phenol
pdb|1PXN|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 4-[4-(4-Methyl-2-Methylamino-Thiazol-5-Yl)-
Pyrimidin-2-Ylamino]-Phenol
pdb|1PXO|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
[4-(2-Amino-4-Methyl-Thiazol-5-Yl)-Pyrimidin-2-
Yl]-(3-Nitro-Phenyl)-Amine
pdb|1PXP|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
N-[4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-Yl]-
N',N'-Dimethyl-Benzene-1,4-Diamine
pdb|1VYZ|A Chain A, Structure Of Cdk2 Complexed With Pnu-181227
pdb|1PYE|A Chain A, Crystal Structure Of Cdk2 With Inhibitor
pdb|1URC|A Chain A, Cyclin A Binding Groove Inhibitor Ace-Arg-Lys-Leu- Phe-Gly
pdb|1URC|C Chain C, Cyclin A Binding Groove Inhibitor Ace-Arg-Lys-Leu- Phe-Gly
pdb|1W0X|C Chain C, Crystals Structure Of Human Cdk2 In Complex With The
Inhibitor Olomoucine.
pdb|1WCC|A Chain A, Screening For Fragment Binding By X-Ray Crystallography
pdb|1Y8Y|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Pyrazolo[1, 5-A]pyrimidine Inhibitor
pdb|1Y91|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Pyrazolo[1, 5-A]pyrimidine Inhibitor
pdb|2BHE|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 5-Bromo-Indirubine
pdb|2BHH|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 4-Hydroxypiperindinesulfonyl-Indirubine
pdb|2B52|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With Dph-
042562
pdb|2B53|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With Din-
234325
pdb|2B54|A Chain A, Human Cyclin Dependent Kinase 2 (Ckd2)complexed With Din-
232305
pdb|2B55|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With
Indenopyraxole Din-101312
pdb|2BTR|A Chain A, Structure Of Cdk2 Complexed With Pnu-198873
pdb|2BTS|A Chain A, Structure Of Cdk2 Complexed With Pnu-230032
pdb|2C68|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C69|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6I|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6K|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6L|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6M|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6O|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2EXM|A Chain A, Human Cdk2 In Complex With Isopentenyladenine
pdb|1YKR|A Chain A, Crystal Structure Of Cdk2 With An Aminoimidazo Pyridine
Inhibitor
pdb|2A0C|X Chain X, Human Cdk2 In Complex With Olomoucine Ii, A Novel 2,6,9-
Trisubstituted Purine Cyclin-Dependent Kinase Inhibitor
pdb|2C5N|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5N|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5O|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5O|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5V|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5V|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5X|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5X|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5Y|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2A4L|A Chain A, Human Cyclin-Dependent Kinase 2 In Complex With
Roscovitine
pdb|2FVD|A Chain A, Cyclin Dependent Kinase 2 (Cdk2) With Diaminopyrimidine
Inhibitor
pdb|2I40|A Chain A, Cdk2CYCLIN A COMPLEXED WITH A THIOPHENE CARBOXAMIDE
INHIBITOR
pdb|2I40|C Chain C, Cdk2CYCLIN A COMPLEXED WITH A THIOPHENE CARBOXAMIDE
INHIBITOR
pdb|2CLX|A Chain A, 4-Arylazo-3,5-Diamino-1h-Pyrazole Cdk Inhibitors: Sar
Study, Crystal Structure In Complex With Cdk2,
Selectivity, And Cellular Effects
pdb|2DUV|A Chain A, Structure Of Cdk2 With A 3-Hydroxychromones
pdb|2UUE|A Chain A, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2UUE|C Chain C, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2UZN|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZO|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2V0D|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|1AQ1|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Staurosporine
pdb|1HCK|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|1HCL|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|2J9M|A Chain A, Crystal Structure Of Cdk2 In Complex With Macrocyclic
Aminopyrimidine
pdb|2V22|A Chain A, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2V22|C Chain C, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2VTA|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTH|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design
pdb|2VTI|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTJ|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTL|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTM|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTN|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTO|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTP|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTQ|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTR|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTS|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTT|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VU3|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2R64|A Chain A, Crystal Structure Of A 3-Aminoindazole Compound With Cdk2
pdb|2W05|A Chain A, Structure Of Cdk2 In Complex With An Imidazolyl
Pyrimidine, Compound 5b
pdb|3EID|A Chain A, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EID|C Chain C, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EJ1|A Chain A, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EJ1|C Chain C, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EOC|A Chain A, Cdk2/cyclina Complexed With A Imidazo Triazin-2-amine
pdb|3EOC|C Chain C, Cdk2/cyclina Complexed With A Imidazo Triazin-2-amine
pdb|2W1H|A Chain A, Fragment-Based Discovery Of The Pyrazol-4-Yl Urea
(At9283), A Multi-Targeted Kinase Inhibitor With Potent
Aurora Kinase Activity
pdb|3F5X|A Chain A, Cdk-2-Cyclin Complex With Indazole Inhibitor 9 Bound At
Its Active Site
pdb|3F5X|C Chain C, Cdk-2-Cyclin Complex With Indazole Inhibitor 9 Bound At
Its Active Site
pdb|3FZ1|A Chain A, Crystal Structure Of A Benzthiophene Inhibitor Bound To
Human Cyclin-Dependent Kinase-2 (Cdk-2)
pdb|2WEV|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WEV|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WFY|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WFY|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WHB|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WHB|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2X1N|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2X1N|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|3LFN|A Chain A, Crystal Structure Of Cdk2 With Sar57, An Aminoindazole
Type Inhibitor
pdb|3LFQ|A Chain A, Crystal Structure Of Cdk2 With Sar60, An Aminoindazole
Type Inhibitor
pdb|3LFS|A Chain A, Crystal Structure Of Cdk2 With Sar37, An Aminoindazole
Type Inhibitor
pdb|2XMY|A Chain A, Discovery And Characterisation Of
2-Anilino-4-(Thiazol-5-Yl) Pyrimidine Transcriptional
Cdk Inhibitors As Anticancer Agents
pdb|2XNB|A Chain A, Discovery And Characterisation Of
2-Anilino-4-(Thiazol-5-Yl) Pyrimidine Transcriptional
Cdk Inhibitors As Anticancer Agents
pdb|3LE6|A Chain A, The Structure Of Cyclin Dependent Kinase 2 (Ckd2) With A
Pyrazolobenzodiazepine Inhibitor
pdb|3NS9|A Chain A, Crystal Structure Of Cdk2 In Complex With Inhibitor Bs-194
pdb|3S2P|A Chain A, Crystal Structure Of Cdk2 With A 2-Aminopyrimidine
Compound
pdb|3UNJ|A Chain A, Cdk2 In Complex With Inhibitor Yl1-038-31
pdb|3UNK|A Chain A, Cdk2 In Complex With Inhibitor Yl5-083
pdb|3TI1|A Chain A, Cdk2 In Complex With Sunitinib
pdb|3TIY|A Chain A, Cdk2 In Complex With Nsc 35676
pdb|3TIZ|A Chain A, Cdk2 In Complex With Nsc 111848
Length = 298
Score = 58.2 bits (139), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 52/203 (25%), Positives = 97/203 (47%), Gaps = 31/203 (15%)
Query: 91 FSDANKLGEGGFGPVYKGVLK-KGDEIAVKRL------PGRSGQGLREMKNEASVIAKVQ 143
F K+GEG +G VYK K G+ +A+K++ G +RE+ S++ ++
Sbjct: 4 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREI----SLLKELN 59
Query: 144 HKNLVRLLGCCIDKDEKILIYEYM----------------PNKSLDFFLFDPTKRMLLDW 187
H N+V+LL +++ L++E++ P + +LF + +
Sbjct: 60 HPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCH 119
Query: 188 SANYSSR-LKVSNILLDKDINPKISDFGMARICGGNELQANTSRIVGTYGYMSPEYAIQ- 245
S R LK N+L++ + K++DFG+AR G ++ T +V T Y +PE +
Sbjct: 120 SHRVLHRDLKPQNLLINTEGAIKLADFGLAR-AFGVPVRTYTHEVV-TLWYRAPEILLGC 177
Query: 246 GIFSIKSDVFSFGVLLLEIVSGK 268
+S D++S G + E+V+ +
Sbjct: 178 KYYSTAVDIWSLGCIFAEMVTRR 200
>pdb|4EOI|A Chain A, Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
pdb|4EOI|C Chain C, Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
Length = 299
Score = 58.2 bits (139), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 52/203 (25%), Positives = 96/203 (47%), Gaps = 31/203 (15%)
Query: 91 FSDANKLGEGGFGPVYKGVLK-KGDEIAVKRL------PGRSGQGLREMKNEASVIAKVQ 143
F K+GEG +G VYK K G+ +A+K++ G +RE+ S++ ++
Sbjct: 5 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREI----SLLKELN 60
Query: 144 HKNLVRLLGCCIDKDEKILIYEYMPNKSLDF----------------FLFDPTKRMLLDW 187
H N+V+LL +++ L++E++ DF +LF + +
Sbjct: 61 HPNIVKLLDVIHTENKLYLVFEFLHQDLKDFMDASALTGIPLPLIKSYLFQLLQGLAFCH 120
Query: 188 SANYSSR-LKVSNILLDKDINPKISDFGMARICGGNELQANTSRIVGTYGYMSPEYAIQ- 245
S R LK N+L++ + K++DFG+AR G ++ +V T Y +PE +
Sbjct: 121 SHRVLHRDLKPENLLINTEGAIKLADFGLAR-AFGVPVRTYXHEVV-TLWYRAPEILLGC 178
Query: 246 GIFSIKSDVFSFGVLLLEIVSGK 268
+S D++S G + E+V+ +
Sbjct: 179 KYYSTAVDIWSLGCIFAEMVTRR 201
>pdb|1OB3|A Chain A, Structure Of P. Falciparum Pfpk5
pdb|1OB3|B Chain B, Structure Of P. Falciparum Pfpk5
pdb|1V0P|A Chain A, Structure Of P. Falciparum Pfpk5-Purvalanol B Ligand
Complex
pdb|1V0P|B Chain B, Structure Of P. Falciparum Pfpk5-Purvalanol B Ligand
Complex
Length = 288
Score = 58.2 bits (139), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 56/202 (27%), Positives = 97/202 (48%), Gaps = 31/202 (15%)
Query: 90 KFSDANKLGEGGFGPVYKGVLKKGDEIAVKRLP-GRSGQGLREMK-NEASVIAKVQHKNL 147
K+ K+GEG +G VYK G+ A+K++ + +G+ E S++ +++H N+
Sbjct: 3 KYHGLEKIGEGTYGVVYKAQNNYGETFALKKIRLEKEDEGIPSTTIREISILKELKHSNI 62
Query: 148 VRLLGCCIDKDEKILIYEYMPN---KSLDF------------FLFDPTKRMLLDWSANYS 192
V+L K +L++E++ K LD FL LL+ A
Sbjct: 63 VKLYDVIHTKKRLVLVFEHLDQDLKKLLDVCEGGLESVTAKSFLLQ-----LLNGIAYCH 117
Query: 193 SR------LKVSNILLDKDINPKISDFGMARICGGNELQANTSRIVGTYGYMSPEYAI-Q 245
R LK N+L++++ KI+DFG+AR G ++ T IV T Y +P+ +
Sbjct: 118 DRRVLHRDLKPQNLLINREGELKIADFGLAR-AFGIPVRKYTHEIV-TLWYRAPDVLMGS 175
Query: 246 GIFSIKSDVFSFGVLLLEIVSG 267
+S D++S G + E+V+G
Sbjct: 176 KKYSTTIDIWSVGCIFAEMVNG 197
>pdb|4ERW|A Chain A, Cdk2 In Complex With Staurosporine
Length = 306
Score = 58.2 bits (139), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 52/201 (25%), Positives = 96/201 (47%), Gaps = 31/201 (15%)
Query: 91 FSDANKLGEGGFGPVYKGVLK-KGDEIAVKRL------PGRSGQGLREMKNEASVIAKVQ 143
F K+GEG +G VYK K G+ +A+K++ G +RE+ S++ ++
Sbjct: 12 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREI----SLLKELN 67
Query: 144 HKNLVRLLGCCIDKDEKILIYEYM----------------PNKSLDFFLFDPTKRMLLDW 187
H N+V+LL +++ L++E++ P + +LF + +
Sbjct: 68 HPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCH 127
Query: 188 SANYSSR-LKVSNILLDKDINPKISDFGMARICGGNELQANTSRIVGTYGYMSPEYAI-Q 245
S R LK N+L++ + K++DFG+AR G ++ T +V T Y +PE +
Sbjct: 128 SHRVLHRDLKPQNLLINTEGAIKLADFGLAR-AFGVPVRTYTHEVV-TLWYRAPEILLGX 185
Query: 246 GIFSIKSDVFSFGVLLLEIVS 266
+S D++S G + E+V+
Sbjct: 186 KYYSTAVDIWSLGCIFAEMVT 206
>pdb|2WQM|A Chain A, Structure Of Apo Human Nek7
pdb|2WQN|A Chain A, Structure Of Adp-Bound Human Nek7
Length = 310
Score = 58.2 bits (139), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 66/272 (24%), Positives = 119/272 (43%), Gaps = 43/272 (15%)
Query: 91 FSDANKLGEGGFGPVYKGV-LKKGDEIAVKRLPG---RSGQGLREMKNEASVIAKVQHKN 146
F K+G G F VY+ L G +A+K++ + + E ++ ++ H N
Sbjct: 34 FRIEKKIGRGQFSEVYRAACLLDGVPVALKKVQIFDLMDAKARADCIKEIDLLKQLNHPN 93
Query: 147 LVRLLGCCIDKDEKILIYEYMPNKSLDFFL--FDPTKRMLLD---WS--ANYSSRLKV-- 197
+++ I+ +E ++ E L + F KR++ + W S L+
Sbjct: 94 VIKYYASFIEDNELNIVLELADAGDLSRMIKHFKKQKRLIPERTVWKYFVQLCSALEHMH 153
Query: 198 SNILLDKDINP-----------KISDFGMARICGGNELQANTSRIVGTYGYMSPEYAIQG 246
S ++ +DI P K+ D G+ R A++ +VGT YMSPE +
Sbjct: 154 SRRVMHRDIKPANVFITATGVVKLGDLGLGRFFSSKTTAAHS--LVGTPYYMSPERIHEN 211
Query: 247 IFSIKSDVFSFGVLLLEIVSGKKTTGFYRTDSLTLLGYAWDLWTSNRTLELID--PILED 304
++ KSD++S G LL E+ + + + FY G +L++ + +E D P+ D
Sbjct: 212 GYNFKSDIWSLGCLLYEMAALQ--SPFY--------GDKMNLYSLCKKIEQCDYPPLPSD 261
Query: 305 EYSSKHMLLRYVNIALLCVQESADDRPTMNEV 336
YS + L + VN +C+ + RP + V
Sbjct: 262 HYSEE--LRQLVN---MCINPDPEKRPDVTYV 288
>pdb|3PJ8|A Chain A, Structure Of Cdk2 In Complex With A
Pyrazolo[4,3-D]pyrimidine Bioisostere Of Roscovitine
Length = 299
Score = 58.2 bits (139), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 52/203 (25%), Positives = 97/203 (47%), Gaps = 31/203 (15%)
Query: 91 FSDANKLGEGGFGPVYKGVLK-KGDEIAVKRL------PGRSGQGLREMKNEASVIAKVQ 143
F K+GEG +G VYK K G+ +A+K++ G +RE+ S++ ++
Sbjct: 5 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREI----SLLKELN 60
Query: 144 HKNLVRLLGCCIDKDEKILIYEYM----------------PNKSLDFFLFDPTKRMLLDW 187
H N+V+LL +++ L++E++ P + +LF + +
Sbjct: 61 HPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCH 120
Query: 188 SANYSSR-LKVSNILLDKDINPKISDFGMARICGGNELQANTSRIVGTYGYMSPEYAIQ- 245
S R LK N+L++ + K++DFG+AR G ++ T +V T Y +PE +
Sbjct: 121 SHRVLHRDLKPQNLLINTEGAIKLADFGLAR-AFGVPVRTYTHEVV-TLWYRAPEILLGC 178
Query: 246 GIFSIKSDVFSFGVLLLEIVSGK 268
+S D++S G + E+V+ +
Sbjct: 179 KYYSTAVDIWSLGCIFAEMVTRR 201
>pdb|3TXO|A Chain A, Pkc Eta Kinase In Complex With A Naphthyridine
Length = 353
Score = 58.2 bits (139), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 58/212 (27%), Positives = 90/212 (42%), Gaps = 31/212 (14%)
Query: 82 SSVSTATNKFSDANKLGEGGFGPVYKGVLKK-GDEIAVKRLPGRSGQGLREMKNEASVIA 140
SS + F LG+G FG V +K+ GD AVK L + L++ E ++
Sbjct: 16 SSNRLGIDNFEFIRVLGKGSFGKVMLARVKETGDLYAVKVL--KKDVILQDDDVECTMTE 73
Query: 141 KV------QHKNLVRLLGCCIDKDEKILIYEYMPNKSLDFFL-----FDPTKR------- 182
K H L +L C D + E++ L F + FD +
Sbjct: 74 KRILSLARNHPFLTQLFCCFQTPDRLFFVMEFVNGGDLMFHIQKSRRFDEARARFYAAEI 133
Query: 183 ----MLLDWSANYSSRLKVSNILLDKDINPKISDFGMAR--ICGGNELQANTSRIVGTYG 236
M L LK+ N+LLD + + K++DFGM + IC G T+ GT
Sbjct: 134 ISALMFLHDKGIIYRDLKLDNVLLDHEGHCKLADFGMCKEGICNG----VTTATFCGTPD 189
Query: 237 YMSPEYAIQGIFSIKSDVFSFGVLLLEIVSGK 268
Y++PE + ++ D ++ GVLL E++ G
Sbjct: 190 YIAPEILQEMLYGPAVDWWAMGVLLYEMLCGH 221
>pdb|3NIZ|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510
With Adp Bound
Length = 311
Score = 58.2 bits (139), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 54/207 (26%), Positives = 99/207 (47%), Gaps = 37/207 (17%)
Query: 89 NKFSDANKLGEGGFGPVYKGVLKKGDEIAVKRL------PGRSGQGLREMKNEASVIAKV 142
K+ K+GEG +G VYK +G +A+KR+ G +RE+ S++ ++
Sbjct: 21 EKYQKLEKVGEGTYGVVYKAKDSQGRIVALKRIRLDAEDEGIPSTAIREI----SLLKEL 76
Query: 143 QHKNLVRLLGCCIDKDEKILIYEYMP---NKSLD------------FFLFDPTKRMLLDW 187
H N+V L+ + L++E+M K LD +L+ ++L
Sbjct: 77 HHPNIVSLIDVIHSERCLTLVFEFMEKDLKKVLDENKTGLQDSQIKIYLY----QLLRGV 132
Query: 188 SANYSSR-----LKVSNILLDKDINPKISDFGMARICGGNELQANTSRIVGTYGYMSPEY 242
+ + R LK N+L++ D K++DFG+AR G +++ T +V T Y +P+
Sbjct: 133 AHCHQHRILHRDLKPQNLLINSDGALKLADFGLAR-AFGIPVRSYTHEVV-TLWYRAPDV 190
Query: 243 AI-QGIFSIKSDVFSFGVLLLEIVSGK 268
+ +S D++S G + E+++GK
Sbjct: 191 LMGSKKYSTSVDIWSIGCIFAEMITGK 217
>pdb|3EZR|A Chain A, Cdk-2 With Indazole Inhibitor 17 Bound At Its Active Site
pdb|3EZV|A Chain A, Cdk-2 With Indazole Inhibitor 9 Bound At Its Active Site
Length = 300
Score = 58.2 bits (139), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 52/203 (25%), Positives = 97/203 (47%), Gaps = 31/203 (15%)
Query: 91 FSDANKLGEGGFGPVYKGVLK-KGDEIAVKRL------PGRSGQGLREMKNEASVIAKVQ 143
F K+GEG +G VYK K G+ +A+K++ G +RE+ S++ ++
Sbjct: 6 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREI----SLLKELN 61
Query: 144 HKNLVRLLGCCIDKDEKILIYEYM----------------PNKSLDFFLFDPTKRMLLDW 187
H N+V+LL +++ L++E++ P + +LF + +
Sbjct: 62 HPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCH 121
Query: 188 SANYSSR-LKVSNILLDKDINPKISDFGMARICGGNELQANTSRIVGTYGYMSPEYAIQ- 245
S R LK N+L++ + K++DFG+AR G ++ T +V T Y +PE +
Sbjct: 122 SHRVLHRDLKPQNLLINTEGAIKLADFGLAR-AFGVPVRTYTHEVV-TLWYRAPEILLGC 179
Query: 246 GIFSIKSDVFSFGVLLLEIVSGK 268
+S D++S G + E+V+ +
Sbjct: 180 KYYSTAVDIWSLGCIFAEMVTRR 202
>pdb|1VYW|A Chain A, Structure Of Cdk2CYCLIN A WITH PNU-292137
pdb|1VYW|C Chain C, Structure Of Cdk2CYCLIN A WITH PNU-292137
pdb|2C4G|A Chain A, Structure Of Cdk2-Cyclin A With Pha-533514
pdb|2C4G|C Chain C, Structure Of Cdk2-Cyclin A With Pha-533514
pdb|2BPM|A Chain A, Structure Of Cdk2-Cyclin A With Pha-630529
pdb|2BPM|C Chain C, Structure Of Cdk2-Cyclin A With Pha-630529
pdb|2BKZ|A Chain A, Structure Of Cdk2-Cyclin A With Pha-404611
pdb|2BKZ|C Chain C, Structure Of Cdk2-Cyclin A With Pha-404611
pdb|2WIH|A Chain A, Structure Of Cdk2-Cyclin A With Pha-848125
pdb|2WIH|C Chain C, Structure Of Cdk2-Cyclin A With Pha-848125
pdb|2WIP|A Chain A, Structure Of Cdk2-Cyclin A Complexed With 8-Anilino-1-
Methyl-4,5-Dihydro-1h-Pyrazolo[4,3-H] Quinazoline-3-
Carboxylic Acid
pdb|2WIP|C Chain C, Structure Of Cdk2-Cyclin A Complexed With 8-Anilino-1-
Methyl-4,5-Dihydro-1h-Pyrazolo[4,3-H] Quinazoline-3-
Carboxylic Acid
pdb|2WPA|A Chain A, Optimisation Of 6,6-Dimethyl Pyrrolo 3,4-C Pyrazoles:
Identification Of Pha-793887, A Potent Cdk Inhibitor
Suitable For Intravenous Dosing
pdb|2WPA|C Chain C, Optimisation Of 6,6-Dimethyl Pyrrolo 3,4-C Pyrazoles:
Identification Of Pha-793887, A Potent Cdk Inhibitor
Suitable For Intravenous Dosing
pdb|2WXV|A Chain A, Structure Of Cdk2-Cyclin A With A Pyrazolo(4,3-H)
Quinazoline-3-Carboxamide Inhibitor
pdb|2WXV|C Chain C, Structure Of Cdk2-Cyclin A With A Pyrazolo(4,3-H)
Quinazoline-3-Carboxamide Inhibitor
Length = 309
Score = 58.2 bits (139), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 52/203 (25%), Positives = 97/203 (47%), Gaps = 31/203 (15%)
Query: 91 FSDANKLGEGGFGPVYKGVLK-KGDEIAVKRL------PGRSGQGLREMKNEASVIAKVQ 143
F K+GEG +G VYK K G+ +A+K++ G +RE+ S++ ++
Sbjct: 9 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREI----SLLKELN 64
Query: 144 HKNLVRLLGCCIDKDEKILIYEYM----------------PNKSLDFFLFDPTKRMLLDW 187
H N+V+LL +++ L++E++ P + +LF + +
Sbjct: 65 HPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCH 124
Query: 188 SANYSSR-LKVSNILLDKDINPKISDFGMARICGGNELQANTSRIVGTYGYMSPEYAIQ- 245
S R LK N+L++ + K++DFG+AR G ++ T +V T Y +PE +
Sbjct: 125 SHRVLHRDLKPQNLLINTEGAIKLADFGLAR-AFGVPVRTYTHEVV-TLWYRAPEILLGC 182
Query: 246 GIFSIKSDVFSFGVLLLEIVSGK 268
+S D++S G + E+V+ +
Sbjct: 183 KYYSTAVDIWSLGCIFAEMVTRR 205
>pdb|2QKR|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510
With Indirubin 3'-Monoxime Bound
Length = 313
Score = 58.2 bits (139), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 54/207 (26%), Positives = 99/207 (47%), Gaps = 37/207 (17%)
Query: 89 NKFSDANKLGEGGFGPVYKGVLKKGDEIAVKRL------PGRSGQGLREMKNEASVIAKV 142
K+ K+GEG +G VYK +G +A+KR+ G +RE+ S++ ++
Sbjct: 21 EKYQKLEKVGEGTYGVVYKAKDSQGRIVALKRIRLDAEDEGIPSTAIREI----SLLKEL 76
Query: 143 QHKNLVRLLGCCIDKDEKILIYEYMP---NKSLD------------FFLFDPTKRMLLDW 187
H N+V L+ + L++E+M K LD +L+ ++L
Sbjct: 77 HHPNIVSLIDVIHSERCLTLVFEFMEKDLKKVLDENKTGLQDSQIKIYLY----QLLRGV 132
Query: 188 SANYSSR-----LKVSNILLDKDINPKISDFGMARICGGNELQANTSRIVGTYGYMSPEY 242
+ + R LK N+L++ D K++DFG+AR G +++ T +V T Y +P+
Sbjct: 133 AHCHQHRILHRDLKPQNLLINSDGALKLADFGLAR-AFGIPVRSYTHEVV-TLWYRAPDV 190
Query: 243 AI-QGIFSIKSDVFSFGVLLLEIVSGK 268
+ +S D++S G + E+++GK
Sbjct: 191 LMGSKKYSTSVDIWSIGCIFAEMITGK 217
>pdb|1GII|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|1GIJ|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|2DS1|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
Length = 298
Score = 57.8 bits (138), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 52/203 (25%), Positives = 97/203 (47%), Gaps = 31/203 (15%)
Query: 91 FSDANKLGEGGFGPVYKGVLK-KGDEIAVKRL------PGRSGQGLREMKNEASVIAKVQ 143
F K+GEG +G VYK K G+ +A+K++ G +RE+ S++ ++
Sbjct: 4 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREI----SLLKELN 59
Query: 144 HKNLVRLLGCCIDKDEKILIYEY----------------MPNKSLDFFLFDPTKRMLLDW 187
H N+V+LL +++ L++E+ +P + +LF + +
Sbjct: 60 HPNIVKLLDVIHTENKLYLVFEHVHQDLKTFMDASALTGIPLPLIKSYLFQLLQGLAFCH 119
Query: 188 SANYSSR-LKVSNILLDKDINPKISDFGMARICGGNELQANTSRIVGTYGYMSPEYAIQ- 245
S R LK N+L++ + K++DFG+AR G ++ T +V T Y +PE +
Sbjct: 120 SHRVLHRDLKPQNLLINTEGAIKLADFGLAR-AFGVPVRTYTHEVV-TLWYRAPEILLGC 177
Query: 246 GIFSIKSDVFSFGVLLLEIVSGK 268
+S D++S G + E+V+ +
Sbjct: 178 KYYSTAVDIWSLGCIFAEMVTRR 200
>pdb|1ZYS|A Chain A, Co-Crystal Structure Of Checkpoint Kinase Chk1 With A
Pyrrolo-Pyridine Inhibitor
Length = 273
Score = 57.8 bits (138), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 52/191 (27%), Positives = 90/191 (47%), Gaps = 19/191 (9%)
Query: 97 LGEGGFGPVYKGVLKKGDE-IAVKRLPGRSGQGLRE-MKNEASVIAKVQHKNLVRLLGCC 154
LGEG +G V V + +E +AVK + + E +K E + A + H+N+V+ G
Sbjct: 15 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINAMLNHENVVKFYGHR 74
Query: 155 IDKDEKILIYEY---------------MPNKSLDFFLFDPTKRMLLDWSANYSSR-LKVS 198
+ + + L EY MP F ++ + R +K
Sbjct: 75 REGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIGITHRDIKPE 134
Query: 199 NILLDKDINPKISDFGMARICGGNELQANTSRIVGTYGYMSPEYAIQGIFSIKS-DVFSF 257
N+LLD+ N KISDFG+A + N + +++ GT Y++PE + F + DV+S
Sbjct: 135 NLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSC 194
Query: 258 GVLLLEIVSGK 268
G++L +++G+
Sbjct: 195 GIVLTAMLAGE 205
>pdb|3C7Q|A Chain A, Structure Of Vegfr2 Kinase Domain In Complex With Bibf1120
Length = 316
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 64/240 (26%), Positives = 97/240 (40%), Gaps = 47/240 (19%)
Query: 74 DQLPL--------FSFSSVSTATNKFSDANKLGEGGFGPVYK----GVLKKGDE--IAVK 119
D+LPL + S ++ LG G FG V + G+ K +AVK
Sbjct: 6 DELPLDEHCERLPYDASKWEFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATXRTVAVK 65
Query: 120 RL-PGRSGQGLREMKNEASVIAKV-QHKNLVRLLGCCIDKDEKILIY------------- 164
L G + R + +E ++ + H N+V LLG C +++
Sbjct: 66 MLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYL 125
Query: 165 -----EYMPNKSLDFFLFDPTKRMLLDWSANYS-------SR------LKVSNILLDKDI 206
E++P K D + T L+ +S + SR L NILL +
Sbjct: 126 RSKRNEFVPYKPEDLYKDFLTLEHLIXYSFQVAKGMEFLASRKXIHRDLAARNILLSEKN 185
Query: 207 NPKISDFGMARICGGNELQANTSRIVGTYGYMSPEYAIQGIFSIKSDVFSFGVLLLEIVS 266
KI DFG+AR + +M+PE +++I+SDV+SFGVLL EI S
Sbjct: 186 VVKICDFGLARDIXKDPDXVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 245
>pdb|3PXF|A Chain A, Cdk2 In Complex With Two Molecules Of
8-Anilino-1-Naphthalene Sulfonate
pdb|3PXQ|A Chain A, Cdk2 In Complex With 3 Molecules Of
8-Anilino-1-Naphthalene Sulfonate
pdb|3PXR|A Chain A, Apo Cdk2 Crystallized From Jeffamine
pdb|3PXY|A Chain A, Cdk2 In Complex With Inhibitor Jws648
pdb|3PXZ|A Chain A, Cdk2 Ternary Complex With Jws648 And Ans
pdb|3PY0|A Chain A, Cdk2 In Complex With Inhibitor Su9516
pdb|3PY1|A Chain A, Cdk2 Ternary Complex With Su9516 And Ans
pdb|3QL8|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-260
pdb|3QQF|A Chain A, Cdk2 In Complex With Inhibitor L1
pdb|3QQG|A Chain A, Cdk2 In Complex With Inhibitor L2-5
pdb|3QQH|A Chain A, Cdk2 In Complex With Inhibitor L2-2
pdb|3QQJ|A Chain A, Cdk2 In Complex With Inhibitor L2
pdb|3QQL|A Chain A, Cdk2 In Complex With Inhibitor L3
pdb|3QRT|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc2-55
pdb|3QRU|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc1-12
pdb|3QWJ|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-142
pdb|3QWK|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-150
pdb|3QX2|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-190
pdb|3QX4|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-78
pdb|3QXO|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-84
pdb|3QZF|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-52
pdb|3QZG|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-76
pdb|3QZH|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-124
pdb|3QZI|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-126
pdb|3R1Q|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-102
pdb|3R1S|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-127
pdb|3R1Y|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-134
pdb|3R28|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-140
pdb|3R6X|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-158
pdb|3R71|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-162
pdb|3R73|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-164
pdb|3R7E|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-67
pdb|3R7I|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-74
pdb|3R7U|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-75
pdb|3R7V|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-9
pdb|3R7Y|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-88
pdb|3R83|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-92
pdb|3R8L|A Chain A, Cdk2 In Complex With Inhibitor L3-4
pdb|3R8M|A Chain A, Cdk2 In Complex With Inhibitor L3-3
pdb|3R8P|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc1-6
pdb|3RAI|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-160
pdb|3RM6|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-80
pdb|3RM7|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-91
pdb|3ROY|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-154
pdb|3RPO|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-156
pdb|4EZ3|A Chain A, Cdk2 In Complex With Nsc 134199
pdb|4EZ7|A Chain A, Cdk2 In Complex With Staurosporine And 2 Molecules Of
8-Anilino-1- Naphthalene Sulfonic Acid
pdb|3QQK|A Chain A, Cdk2 In Complex With Inhibitor L4
pdb|3QTQ|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-137
pdb|3QTR|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-148
pdb|3QTS|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-12
pdb|3QTU|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-132
pdb|3QTW|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-13
pdb|3QTX|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-35
pdb|3QTZ|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-36
pdb|3QU0|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-38
pdb|3QXP|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-89
pdb|3R8U|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-132
pdb|3R8V|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-135
pdb|3R8Z|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-136
pdb|3R9D|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-135
pdb|3R9H|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-142
pdb|3R9N|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-21
pdb|3R9O|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-143
pdb|3RAH|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-22
pdb|3RAK|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-32
pdb|3RAL|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-34
pdb|3RJC|A Chain A, Cdk2 In Complex With Inhibitor L4-12
pdb|3RK5|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-72
pdb|3RK7|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-71
pdb|3RK9|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-74
pdb|3RKB|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-73
pdb|3RMF|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-33
pdb|3RNI|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-86
pdb|3RPR|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-49
pdb|3RPV|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-88
pdb|3RPY|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-40
pdb|3RZB|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-23
pdb|3S00|A Chain A, Cdk2 In Complex With Inhibitor L4-14
pdb|3S0O|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-138
pdb|3S1H|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-39
pdb|3SQQ|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-96
pdb|4GCJ|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-89
Length = 306
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 52/201 (25%), Positives = 96/201 (47%), Gaps = 31/201 (15%)
Query: 91 FSDANKLGEGGFGPVYKGVLK-KGDEIAVKRL------PGRSGQGLREMKNEASVIAKVQ 143
F K+GEG +G VYK K G+ +A+K++ G +RE+ S++ ++
Sbjct: 12 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREI----SLLKELN 67
Query: 144 HKNLVRLLGCCIDKDEKILIYEYM----------------PNKSLDFFLFDPTKRMLLDW 187
H N+V+LL +++ L++E++ P + +LF + +
Sbjct: 68 HPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCH 127
Query: 188 SANYSSR-LKVSNILLDKDINPKISDFGMARICGGNELQANTSRIVGTYGYMSPEYAIQ- 245
S R LK N+L++ + K++DFG+AR G ++ T +V T Y +PE +
Sbjct: 128 SHRVLHRDLKPQNLLINTEGAIKLADFGLAR-AFGVPVRTYTHEVV-TLWYRAPEILLGC 185
Query: 246 GIFSIKSDVFSFGVLLLEIVS 266
+S D++S G + E+V+
Sbjct: 186 KYYSTAVDIWSLGCIFAEMVT 206
>pdb|1V0O|A Chain A, Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulphonate
Ligand Complex
pdb|1V0O|B Chain B, Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulphonate
Ligand Complex
Length = 288
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 55/202 (27%), Positives = 97/202 (48%), Gaps = 31/202 (15%)
Query: 90 KFSDANKLGEGGFGPVYKGVLKKGDEIAVKRLP-GRSGQGLREMK-NEASVIAKVQHKNL 147
K+ K+GEG +G VYK G+ A+K++ + +G+ E S++ +++H N+
Sbjct: 3 KYHGLEKIGEGTYGVVYKAQNNYGETFALKKIRLEKEDEGIPSTTIREISILKELKHSNI 62
Query: 148 VRLLGCCIDKDEKILIYEYMPN---KSLDF------------FLFDPTKRMLLDWSANYS 192
V+L K +L++E++ K LD FL LL+ A
Sbjct: 63 VKLYDVIHTKKRLVLVFEHLDQDLKKLLDVCEGGLESVTAKSFLLQ-----LLNGIAYCH 117
Query: 193 SR------LKVSNILLDKDINPKISDFGMARICGGNELQANTSRIVGTYGYMSPEYAI-Q 245
R LK N+L++++ KI+DFG+AR G ++ T +V T Y +P+ +
Sbjct: 118 DRRVLHRDLKPQNLLINREGELKIADFGLAR-AFGIPVRKYTHEVV-TLWYRAPDVLMGS 175
Query: 246 GIFSIKSDVFSFGVLLLEIVSG 267
+S D++S G + E+V+G
Sbjct: 176 KKYSTTIDIWSVGCIFAEMVNG 197
>pdb|1V0B|A Chain A, Crystal Structure Of The T198a Mutant Of Pfpk5
pdb|1V0B|B Chain B, Crystal Structure Of The T198a Mutant Of Pfpk5
Length = 288
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 55/202 (27%), Positives = 97/202 (48%), Gaps = 31/202 (15%)
Query: 90 KFSDANKLGEGGFGPVYKGVLKKGDEIAVKRLP-GRSGQGLREMK-NEASVIAKVQHKNL 147
K+ K+GEG +G VYK G+ A+K++ + +G+ E S++ +++H N+
Sbjct: 3 KYHGLEKIGEGTYGVVYKAQNNYGETFALKKIRLEKEDEGIPSTTIREISILKELKHSNI 62
Query: 148 VRLLGCCIDKDEKILIYEYMPN---KSLDF------------FLFDPTKRMLLDWSANYS 192
V+L K +L++E++ K LD FL LL+ A
Sbjct: 63 VKLYDVIHTKKRLVLVFEHLDQDLKKLLDVCEGGLESVTAKSFLLQ-----LLNGIAYCH 117
Query: 193 SR------LKVSNILLDKDINPKISDFGMARICGGNELQANTSRIVGTYGYMSPEYAI-Q 245
R LK N+L++++ KI+DFG+AR G ++ T +V T Y +P+ +
Sbjct: 118 DRRVLHRDLKPQNLLINREGELKIADFGLAR-AFGIPVRKYTHEVV-TLWYRAPDVLMGS 175
Query: 246 GIFSIKSDVFSFGVLLLEIVSG 267
+S D++S G + E+V+G
Sbjct: 176 KKYSTTIDIWSVGCIFAEMVNG 197
>pdb|4F1O|A Chain A, Crystal Structure Of The L1180t Mutant Roco4 Kinase Domain
From D. Discoideum Bound To Appcp
Length = 287
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 65/292 (22%), Positives = 126/292 (43%), Gaps = 54/292 (18%)
Query: 85 STATNKFSDANKLGEGGFGPVYKGVLKKGDE-IAVKRLPGRSGQG-------LREMKNEA 136
+ A N+ ++G+GGFG V+KG L K +A+K L +G +E + E
Sbjct: 15 TLADNEIEYEKQIGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQREV 74
Query: 137 SVIAKVQHKNLVRLLGCCIDKDEKILIYEYMPNKSLDFFLFD---PTK-----RMLLDWS 188
+++ + H N+V+L G + ++ E++P L L D P K R++LD +
Sbjct: 75 FIMSNLNHPNIVKLYGLMHNPPR--MVMEFVPCGDLYHRLLDKAHPIKWSVKLRLMLDIA 132
Query: 189 AN-----------YSSRLKVSNILL-----DKDINPKISDFGMARICGGNELQANTSRIV 232
L+ NI L + + K++DFG ++ + + S ++
Sbjct: 133 LGIEYMQNQNPPIVHRDLRSPNIFLQSLDENAPVCAKVADFGTSQ-----QSVHSVSGLL 187
Query: 233 GTYGYMSPEY--AIQGIFSIKSDVFSFGVLLLEIVSGKKTTGFYRTDSLTLLGYAWDLWT 290
G + +M+PE A + ++ K+D +SF ++L I++G+ Y + + +
Sbjct: 188 GNFQWMAPETIGAEEESYTEKADTYSFAMILYTILTGEGPFDEYSYGKIKFINMIRE--- 244
Query: 291 SNRTLELIDPILEDEYSSKHMLLRYVNIALLCVQESADDRPTMNEVVSMLTD 342
E + P + ++ R N+ LC RP + +V L++
Sbjct: 245 -----EGLRPTIPEDCPP-----RLRNVIELCWSGDPKKRPHFSYIVKELSE 286
>pdb|2CLQ|A Chain A, Structure Of Mitogen-Activated Protein Kinase Kinase
Kinase 5
pdb|2CLQ|B Chain B, Structure Of Mitogen-Activated Protein Kinase Kinase
Kinase 5
Length = 295
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 53/195 (27%), Positives = 90/195 (46%), Gaps = 25/195 (12%)
Query: 97 LGEGGFGPVYKGV-LKKGDEIAVKRLPGRSGQGLREMKNEASVIAKVQHKNLVRLLGCCI 155
LG+G +G VY G L IA+K +P R + + + E ++ ++HKN+V+ LG
Sbjct: 30 LGKGTYGIVYAGRDLSNQVRIAIKEIPERDSRYSQPLHEEIALHKHLKHKNIVQYLGSFS 89
Query: 156 DKDEKILIYEYMPNKSLDFFL---FDPTK---RMLLDWSANYSSRLKV--SNILLDKDIN 207
+ + E +P SL L + P K + + ++ LK N ++ +DI
Sbjct: 90 ENGFIKIFMEQVPGGSLSALLRSKWGPLKDNEQTIGFYTKQILEGLKYLHDNQIVHRDIK 149
Query: 208 P------------KISDFGMARICGGNELQANTSRIVGTYGYMSPEYAIQGI--FSIKSD 253
KISDFG ++ G + T GT YM+PE +G + +D
Sbjct: 150 GDNVLINTYSGVLKISDFGTSKRLAG--INPCTETFTGTLQYMAPEIIDKGPRGYGKAAD 207
Query: 254 VFSFGVLLLEIVSGK 268
++S G ++E+ +GK
Sbjct: 208 IWSLGCTIIEMATGK 222
>pdb|3GQI|A Chain A, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
Length = 326
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 56/212 (26%), Positives = 90/212 (42%), Gaps = 42/212 (19%)
Query: 97 LGEGGFGPVY--------KGVLKKGDEIAVKRLPGRSGQ-GLREMKNEASVIAKV-QHKN 146
LGEG FG V K + ++AVK L + + L ++ +E ++ + +HKN
Sbjct: 36 LGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKN 95
Query: 147 LVRLLGCCIDKDEKILIYEYMPNKSLDFFL-----------FDPTKRMLLDWSAN----- 190
++ LLG C +I EY +L +L F+P+ S+
Sbjct: 96 IINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEFSFNPSHNPEEQLSSKDLVSC 155
Query: 191 ----------------YSSRLKVSNILLDKDINPKISDFGMARICGGNELQANTSRIVGT 234
L N+L+ +D KI+DFG+AR + T+
Sbjct: 156 AYQVARGMEYLASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDXXKKTTNGRLP 215
Query: 235 YGYMSPEYAIQGIFSIKSDVFSFGVLLLEIVS 266
+M+PE I++ +SDV+SFGVLL EI +
Sbjct: 216 VKWMAPEALFDRIYTHQSDVWSFGVLLWEIFT 247
>pdb|2J7T|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
Bound To Su11274
pdb|4AOT|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
(Lok) Bound To Gw830263a
pdb|4AOT|B Chain B, Crystal Structure Of Human Serine Threonine Kinase-10
(Lok) Bound To Gw830263a
pdb|4EQU|A Chain A, Human Stk-10 (Lok) Kinase Domain In Dfg-Out Conformation
With Inhibitor Dsa-7
pdb|4EQU|B Chain B, Human Stk-10 (Lok) Kinase Domain In Dfg-Out Conformation
With Inhibitor Dsa-7
Length = 302
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 48/196 (24%), Positives = 92/196 (46%), Gaps = 29/196 (14%)
Query: 96 KLGEGGFGPVYKGVLKK-GDEIAVKRLPGRSGQGLREMKNEASVIAKVQHKNLVRLLGCC 154
+LG+G FG VYK K+ G A K + +S + L + E ++A H +V+LLG
Sbjct: 26 ELGDGAFGKVYKAKNKETGALAAAKVIETKSEEELEDYIVEIEILATCDHPYIVKLLGAY 85
Query: 155 IDKDEKILIYEYMPNKSLDFFLFD------------PTKRMLLDWSANYSSR-----LKV 197
+ ++ E+ P ++D + + ++ML + +S R LK
Sbjct: 86 YHDGKLWIMIEFCPGGAVDAIMLELDRGLTEPQIQVVCRQMLEALNFLHSKRIIHRDLKA 145
Query: 198 SNILLDKDINPKISDFGMARICGGNELQANTSR--IVGTYGYMSPEYAI-----QGIFSI 250
N+L+ + + +++DFG++ L+ R +GT +M+PE + +
Sbjct: 146 GNVLMTLEGDIRLADFGVS----AKNLKTLQKRDSFIGTPYWMAPEVVMCETMKDTPYDY 201
Query: 251 KSDVFSFGVLLLEIVS 266
K+D++S G+ L+E+
Sbjct: 202 KADIWSLGITLIEMAQ 217
>pdb|4EOK|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Nu6102
pdb|4EOK|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Nu6102
pdb|4EOL|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Ro3306
pdb|4EOL|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Ro3306
Length = 300
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 52/203 (25%), Positives = 96/203 (47%), Gaps = 31/203 (15%)
Query: 91 FSDANKLGEGGFGPVYKGVLK-KGDEIAVKRL------PGRSGQGLREMKNEASVIAKVQ 143
F K+GEG +G VYK K G+ +A+K++ G +RE+ S++ ++
Sbjct: 7 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREI----SLLKELN 62
Query: 144 HKNLVRLLGCCIDKDEKILIYEYMPNKSLDF----------------FLFDPTKRMLLDW 187
H N+V+LL +++ L++E++ DF +LF + +
Sbjct: 63 HPNIVKLLDVIHTENKLYLVFEFLSMDLKDFMDASALTGIPLPLIKSYLFQLLQGLAFCH 122
Query: 188 SANYSSR-LKVSNILLDKDINPKISDFGMARICGGNELQANTSRIVGTYGYMSPEYAIQ- 245
S R LK N+L++ + K++DFG+AR G ++ +V T Y +PE +
Sbjct: 123 SHRVLHRDLKPQNLLINTEGAIKLADFGLAR-AFGVPVRTYXHEVV-TLWYRAPEILLGC 180
Query: 246 GIFSIKSDVFSFGVLLLEIVSGK 268
+S D++S G + E+V+ +
Sbjct: 181 KYYSTAVDIWSLGCIFAEMVTRR 203
>pdb|4BC6|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
Bound To Novel Bosutinib Isoform 1, Previously Thought
To Be Bosutinib
Length = 293
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 48/196 (24%), Positives = 92/196 (46%), Gaps = 29/196 (14%)
Query: 96 KLGEGGFGPVYKGVLKK-GDEIAVKRLPGRSGQGLREMKNEASVIAKVQHKNLVRLLGCC 154
+LG+G FG VYK K+ G A K + +S + L + E ++A H +V+LLG
Sbjct: 18 ELGDGAFGKVYKAKNKETGALAAAKVIETKSEEELEDYIVEIEILATCDHPYIVKLLGAY 77
Query: 155 IDKDEKILIYEYMPNKSLDFFLFD------------PTKRMLLDWSANYSSR-----LKV 197
+ ++ E+ P ++D + + ++ML + +S R LK
Sbjct: 78 YHDGKLWIMIEFCPGGAVDAIMLELDRGLTEPQIQVVCRQMLEALNFLHSKRIIHRDLKA 137
Query: 198 SNILLDKDINPKISDFGMARICGGNELQANTSR--IVGTYGYMSPEYAI-----QGIFSI 250
N+L+ + + +++DFG++ L+ R +GT +M+PE + +
Sbjct: 138 GNVLMTLEGDIRLADFGVS----AKNLKTLQKRDSFIGTPYWMAPEVVMCETMKDTPYDY 193
Query: 251 KSDVFSFGVLLLEIVS 266
K+D++S G+ L+E+
Sbjct: 194 KADIWSLGITLIEMAQ 209
>pdb|3GBZ|A Chain A, Structure Of The Cmgc Cdk Kinase From Giardia Lamblia
pdb|3GC0|A Chain A, Structure Of The Cmgc Cdk Kinase From Giardia Lamblia In
Complex With Amp
Length = 329
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 60/214 (28%), Positives = 97/214 (45%), Gaps = 34/214 (15%)
Query: 80 SFSSVSTATNKFSDANKLGEGGFGPVYKGVLKKGDE-IAVKRL------PGRSGQGLREM 132
S + +T+ +++ KLGEG +G VYK + +E +A+KR+ G G +RE+
Sbjct: 25 SAAPSATSIDRYRRITKLGEGTYGEVYKAIDTVTNETVAIKRIRLEHEEEGVPGTAIREV 84
Query: 133 KNEASVIAKVQHKNLVRLLGCCIDKDEKILIYEYMPNKSLDFFLFDPTKRMLLDWSANYS 192
S++ ++QH+N++ L LI+EY N + +P M + S Y
Sbjct: 85 ----SLLKELQHRNIIELKSVIHHNHRLHLIFEYAENDLKKYMDKNPDVSMRVIKSFLYQ 140
Query: 193 ---------SR------LKVSNILL---DKDINP--KISDFGMARICGGNELQANTSRIV 232
SR LK N+LL D P KI DFG+AR G ++ T I+
Sbjct: 141 LINGVNFCHSRRCLHRDLKPQNLLLSVSDASETPVLKIGDFGLAR-AFGIPIRQFTHEII 199
Query: 233 GTYGYMSPEYAIQG-IFSIKSDVFSFGVLLLEIV 265
T Y PE + +S D++S + E++
Sbjct: 200 -TLWYRPPEILLGSRHYSTSVDIWSIACIWAEML 232
>pdb|4EOJ|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With Atp
pdb|4EOJ|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With Atp
Length = 302
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 52/203 (25%), Positives = 96/203 (47%), Gaps = 31/203 (15%)
Query: 91 FSDANKLGEGGFGPVYKGVLK-KGDEIAVKRL------PGRSGQGLREMKNEASVIAKVQ 143
F K+GEG +G VYK K G+ +A+K++ G +RE+ S++ ++
Sbjct: 8 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREI----SLLKELN 63
Query: 144 HKNLVRLLGCCIDKDEKILIYEYMPNKSLDF----------------FLFDPTKRMLLDW 187
H N+V+LL +++ L++E++ DF +LF + +
Sbjct: 64 HPNIVKLLDVIHTENKLYLVFEFLSMDLKDFMDASALTGIPLPLIKSYLFQLLQGLAFCH 123
Query: 188 SANYSSR-LKVSNILLDKDINPKISDFGMARICGGNELQANTSRIVGTYGYMSPEYAIQ- 245
S R LK N+L++ + K++DFG+AR G ++ +V T Y +PE +
Sbjct: 124 SHRVLHRDLKPQNLLINTEGAIKLADFGLAR-AFGVPVRTYXHEVV-TLWYRAPEILLGC 181
Query: 246 GIFSIKSDVFSFGVLLLEIVSGK 268
+S D++S G + E+V+ +
Sbjct: 182 KYYSTAVDIWSLGCIFAEMVTRR 204
>pdb|2PWL|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549h Mutation Responsible For
Crouzon Syndrome.
pdb|2PWL|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549h Mutation Responsible For
Crouzon Syndrome
Length = 324
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 57/220 (25%), Positives = 95/220 (43%), Gaps = 42/220 (19%)
Query: 89 NKFSDANKLGEGGFGPVY--------KGVLKKGDEIAVKRLPGRSGQ-GLREMKNEASVI 139
+K + LGEG FG V K K+ +AVK L + + L ++ +E ++
Sbjct: 35 DKLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMM 94
Query: 140 AKV-QHKNLVRLLGCCIDKDEKILIYEYMPNKSLDFFL-----------FD----PTKRM 183
+ +HKN++ LLG C +I EY +L +L +D P ++M
Sbjct: 95 KMIGKHKNIIHLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQM 154
Query: 184 LLD--WSANYS---------------SRLKVSNILLDKDINPKISDFGMARICGGNELQA 226
S Y L N+L+ ++ KI+DFG+AR +
Sbjct: 155 TFKDLVSCTYQLARGMEYLASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYK 214
Query: 227 NTSRIVGTYGYMSPEYAIQGIFSIKSDVFSFGVLLLEIVS 266
T+ +M+PE +++ +SDV+SFGVL+ EI +
Sbjct: 215 KTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 254
>pdb|3PWY|A Chain A, Crystal Structure Of An Extender (Spd28345)-Modified Human
Pdk1 Complex 2
Length = 311
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 55/199 (27%), Positives = 86/199 (43%), Gaps = 24/199 (12%)
Query: 91 FSDANKLGEGGFGPVYKG-VLKKGDEIAVKRLPGRSGQGLREMK-----NEASVIAKVQH 144
F LGEG F V L E A+K L R ++E K E V++++ H
Sbjct: 34 FKFGKILGEGSFSTVVLARELATSREYAIKILEKR--HIIKENKVPYVTRERDVMSRLDH 91
Query: 145 KNLVRLLGCCIDKDEKILIYEYMPNKSLDFFL-----FDPTKRML-----------LDWS 188
V+L D ++ Y N L ++ FD T L
Sbjct: 92 PFFVKLYFTFQDDEKLYFGLSYAKNGCLLKYIRKIGSFDETCTRFYTAEIVSALEYLHGK 151
Query: 189 ANYSSRLKVSNILLDKDINPKISDFGMARICGGNELQANTSRIVGTYGYMSPEYAIQGIF 248
LK NILL++D++ +I+DFG A++ QA + VGT Y+SPE +
Sbjct: 152 GIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANSFVGTAQYVSPELLTEKSA 211
Query: 249 SIKSDVFSFGVLLLEIVSG 267
S SD+++ G ++ ++V+G
Sbjct: 212 SKSSDLWALGCIIYQLVAG 230
>pdb|3VW6|A Chain A, Crystal Structure Of Human Apoptosis Signal-Regulating
Kinase 1 (Ask1) With Imidazopyridine Inhibitor
pdb|3VW6|B Chain B, Crystal Structure Of Human Apoptosis Signal-Regulating
Kinase 1 (Ask1) With Imidazopyridine Inhibitor
Length = 269
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 53/195 (27%), Positives = 90/195 (46%), Gaps = 25/195 (12%)
Query: 97 LGEGGFGPVYKGV-LKKGDEIAVKRLPGRSGQGLREMKNEASVIAKVQHKNLVRLLGCCI 155
LG+G +G VY G L IA+K +P R + + + E ++ ++HKN+V+ LG
Sbjct: 16 LGKGTYGIVYAGRDLSNQVRIAIKEIPERDSRYSQPLHEEIALHKHLKHKNIVQYLGSFS 75
Query: 156 DKDEKILIYEYMPNKSLDFFL---FDPTK---RMLLDWSANYSSRLKV--SNILLDKDIN 207
+ + E +P SL L + P K + + ++ LK N ++ +DI
Sbjct: 76 ENGFIKIFMEQVPGGSLSALLRSKWGPLKDNEQTIGFYTKQILEGLKYLHDNQIVHRDIK 135
Query: 208 P------------KISDFGMARICGGNELQANTSRIVGTYGYMSPEYAIQGI--FSIKSD 253
KISDFG ++ G + T GT YM+PE +G + +D
Sbjct: 136 GDNVLINTYSGVLKISDFGTSKRLAG--INPCTETFTGTLQYMAPEIIDKGPRGYGKAAD 193
Query: 254 VFSFGVLLLEIVSGK 268
++S G ++E+ +GK
Sbjct: 194 IWSLGCTIIEMATGK 208
>pdb|2PVF|A Chain A, Crystal Structure Of Tyrosine Phosphorylated Activated Fgf
Receptor 2 (Fgfr2) Kinase Domain In Complex With Atp
Analog And Substrate Peptide
Length = 334
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 57/220 (25%), Positives = 95/220 (43%), Gaps = 42/220 (19%)
Query: 89 NKFSDANKLGEGGFGPVY--------KGVLKKGDEIAVKRLPGRSGQ-GLREMKNEASVI 139
+K + LGEG FG V K K+ +AVK L + + L ++ +E ++
Sbjct: 35 DKLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMM 94
Query: 140 AKV-QHKNLVRLLGCCIDKDEKILIYEYMPNKSLDFFL-----------FD----PTKRM 183
+ +HKN++ LLG C +I EY +L +L +D P ++M
Sbjct: 95 KMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEXSYDINRVPEEQM 154
Query: 184 LLD--WSANYS---------------SRLKVSNILLDKDINPKISDFGMARICGGNELQA 226
S Y L N+L+ ++ KI+DFG+AR +
Sbjct: 155 TFKDLVSCTYQLARGMEYLASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDXXK 214
Query: 227 NTSRIVGTYGYMSPEYAIQGIFSIKSDVFSFGVLLLEIVS 266
T+ +M+PE +++ +SDV+SFGVL+ EI +
Sbjct: 215 KTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 254
>pdb|3CLY|A Chain A, Crystal Structure Of Fgf Receptor 2 (Fgfr2) Kinase Domains
Trapped In Trans-Phosphorylation Reaction
Length = 334
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 57/220 (25%), Positives = 95/220 (43%), Gaps = 42/220 (19%)
Query: 89 NKFSDANKLGEGGFGPVY--------KGVLKKGDEIAVKRLPGRSGQ-GLREMKNEASVI 139
+K + LGEG FG V K K+ +AVK L + + L ++ +E ++
Sbjct: 35 DKLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMM 94
Query: 140 AKV-QHKNLVRLLGCCIDKDEKILIYEYMPNKSLDFFL-----------FD----PTKRM 183
+ +HKN++ LLG C +I EY +L +L +D P ++M
Sbjct: 95 KMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQM 154
Query: 184 LLD--WSANYS---------------SRLKVSNILLDKDINPKISDFGMARICGGNELQA 226
S Y L N+L+ ++ KI+DFG+AR +
Sbjct: 155 TFKDLVSCTYQLARGMEYLASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDXXK 214
Query: 227 NTSRIVGTYGYMSPEYAIQGIFSIKSDVFSFGVLLLEIVS 266
T+ +M+PE +++ +SDV+SFGVL+ EI +
Sbjct: 215 KTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 254
>pdb|3RHX|B Chain B, Crystal Structure Of The Catalytic Domain Of Fgfr1 Kinase
In Complex With Arq 069
pdb|3RHX|A Chain A, Crystal Structure Of The Catalytic Domain Of Fgfr1 Kinase
In Complex With Arq 069
Length = 306
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 57/213 (26%), Positives = 91/213 (42%), Gaps = 44/213 (20%)
Query: 97 LGEGGFGPVY--------KGVLKKGDEIAVKRLPGRSGQ-GLREMKNEASVIAKV-QHKN 146
LGEG FG V K + ++AVK L + + L ++ +E ++ + +HKN
Sbjct: 25 LGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKN 84
Query: 147 LVRLLGCCIDKDEKILIYEYMPNKSLDFFLFDPTKRMLLDWSANYSSR------------ 194
++ LLG C +I EY +L +L + L++S N S
Sbjct: 85 IINLLGACTQDGPLYVIVEYASKGNLREYL-QARRPPGLEYSYNPSHNPEEQLSSKDLVS 143
Query: 195 ---------------------LKVSNILLDKDINPKISDFGMARICGGNELQANTSRIVG 233
L N+L+ +D KI+DFG+AR + T+
Sbjct: 144 CAYQVARGMEYLASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKTTNGRL 203
Query: 234 TYGYMSPEYAIQGIFSIKSDVFSFGVLLLEIVS 266
+M+PE I++ +SDV+SFGVLL EI +
Sbjct: 204 PVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFT 236
>pdb|1FGK|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1
pdb|1FGK|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1
pdb|1FGI|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su5402 Inhibitor
pdb|1FGI|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su5402 Inhibitor
pdb|1AGW|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su4984 Inhibitor
pdb|1AGW|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su4984 Inhibitor
pdb|2FGI|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of Fgf
Receptor 1 In Complex With Inhibitor Pd173074
pdb|2FGI|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of Fgf
Receptor 1 In Complex With Inhibitor Pd173074
Length = 310
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 57/213 (26%), Positives = 91/213 (42%), Gaps = 44/213 (20%)
Query: 97 LGEGGFGPVY--------KGVLKKGDEIAVKRLPGRSGQ-GLREMKNEASVIAKV-QHKN 146
LGEG FG V K + ++AVK L + + L ++ +E ++ + +HKN
Sbjct: 29 LGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKN 88
Query: 147 LVRLLGCCIDKDEKILIYEYMPNKSLDFFLFDPTKRMLLDWSANYSSR------------ 194
++ LLG C +I EY +L +L + L++S N S
Sbjct: 89 IINLLGACTQDGPLYVIVEYASKGNLREYL-QARRPPGLEYSYNPSHNPEEQLSSKDLVS 147
Query: 195 ---------------------LKVSNILLDKDINPKISDFGMARICGGNELQANTSRIVG 233
L N+L+ +D KI+DFG+AR + T+
Sbjct: 148 CAYQVARGMEYLASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKTTNGRL 207
Query: 234 TYGYMSPEYAIQGIFSIKSDVFSFGVLLLEIVS 266
+M+PE I++ +SDV+SFGVLL EI +
Sbjct: 208 PVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFT 240
>pdb|4F63|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 1
pdb|4F63|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 1
pdb|4F64|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 6
pdb|4F64|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 6
pdb|4F65|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 8
pdb|4F65|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 8
Length = 309
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 57/213 (26%), Positives = 91/213 (42%), Gaps = 44/213 (20%)
Query: 97 LGEGGFGPVY--------KGVLKKGDEIAVKRLPGRSGQ-GLREMKNEASVIAKV-QHKN 146
LGEG FG V K + ++AVK L + + L ++ +E ++ + +HKN
Sbjct: 28 LGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKN 87
Query: 147 LVRLLGCCIDKDEKILIYEYMPNKSLDFFLFDPTKRMLLDWSANYSSR------------ 194
++ LLG C +I EY +L +L + L++S N S
Sbjct: 88 IINLLGACTQDGPLYVIVEYASKGNLREYL-QARRPPGLEYSYNPSHNPEEQLSSKDLVS 146
Query: 195 ---------------------LKVSNILLDKDINPKISDFGMARICGGNELQANTSRIVG 233
L N+L+ +D KI+DFG+AR + T+
Sbjct: 147 CAYQVARGMEYLASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKTTNGRL 206
Query: 234 TYGYMSPEYAIQGIFSIKSDVFSFGVLLLEIVS 266
+M+PE I++ +SDV+SFGVLL EI +
Sbjct: 207 PVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFT 239
>pdb|2PZP|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K526e Mutation Responsible For
Crouzon Syndrome
pdb|2PZP|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K526e Mutation Responsible For
Crouzon Syndrome
Length = 324
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 57/220 (25%), Positives = 95/220 (43%), Gaps = 42/220 (19%)
Query: 89 NKFSDANKLGEGGFGPVY--------KGVLKKGDEIAVKRLPG-RSGQGLREMKNEASVI 139
+K + LGEG FG V K K+ +AVK L + + L ++ +E ++
Sbjct: 35 DKLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEEDLSDLVSEMEMM 94
Query: 140 AKV-QHKNLVRLLGCCIDKDEKILIYEYMPNKSLDFFL-----------FD----PTKRM 183
+ +HKN++ LLG C +I EY +L +L +D P ++M
Sbjct: 95 KMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQM 154
Query: 184 LLD--WSANYS---------------SRLKVSNILLDKDINPKISDFGMARICGGNELQA 226
S Y L N+L+ ++ KI+DFG+AR +
Sbjct: 155 TFKDLVSCTYQLARGMEYLASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYK 214
Query: 227 NTSRIVGTYGYMSPEYAIQGIFSIKSDVFSFGVLLLEIVS 266
T+ +M+PE +++ +SDV+SFGVL+ EI +
Sbjct: 215 KTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 254
>pdb|3JS2|A Chain A, Crystal Structure Of Minimal Kinase Domain Of Fibroblast
Growth Factor Receptor 1 In Complex With 5-(2-Thienyl)
Nicotinic Acid
pdb|3JS2|B Chain B, Crystal Structure Of Minimal Kinase Domain Of Fibroblast
Growth Factor Receptor 1 In Complex With 5-(2-Thienyl)
Nicotinic Acid
pdb|3KY2|A Chain A, Crystal Structure Of Fibroblast Growth Factor Receptor 1
Kinase Domain
pdb|3KY2|B Chain B, Crystal Structure Of Fibroblast Growth Factor Receptor 1
Kinase Domain
Length = 317
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 57/213 (26%), Positives = 91/213 (42%), Gaps = 44/213 (20%)
Query: 97 LGEGGFGPVY--------KGVLKKGDEIAVKRLPGRSGQ-GLREMKNEASVIAKV-QHKN 146
LGEG FG V K + ++AVK L + + L ++ +E ++ + +HKN
Sbjct: 36 LGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKN 95
Query: 147 LVRLLGCCIDKDEKILIYEYMPNKSLDFFLFDPTKRMLLDWSANYSSR------------ 194
++ LLG C +I EY +L +L + L++S N S
Sbjct: 96 IINLLGACTQDGPLYVIVEYASKGNLREYL-QARRPPGLEYSYNPSHNPEEQLSSKDLVS 154
Query: 195 ---------------------LKVSNILLDKDINPKISDFGMARICGGNELQANTSRIVG 233
L N+L+ +D KI+DFG+AR + T+
Sbjct: 155 CAYQVARGMEYLASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKTTNGRL 214
Query: 234 TYGYMSPEYAIQGIFSIKSDVFSFGVLLLEIVS 266
+M+PE I++ +SDV+SFGVLL EI +
Sbjct: 215 PVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFT 247
>pdb|3TT0|A Chain A, Co-Structure Of Fibroblast Growth Factor Receptor 1 Kinase
Domain With
3-(2,6-Dichloro-3,
5-Dimethoxy-Phenyl)-1-{6-[4-(4-Ethyl-Piperazin-1-
Yl)-Phenylamino]-Pyrimidin-4-Yl}-1-Methyl-Urea (Bgj398)
pdb|3TT0|B Chain B, Co-Structure Of Fibroblast Growth Factor Receptor 1 Kinase
Domain With
3-(2,6-Dichloro-3,
5-Dimethoxy-Phenyl)-1-{6-[4-(4-Ethyl-Piperazin-1-
Yl)-Phenylamino]-Pyrimidin-4-Yl}-1-Methyl-Urea (Bgj398)
Length = 382
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 57/213 (26%), Positives = 91/213 (42%), Gaps = 44/213 (20%)
Query: 97 LGEGGFGPVY--------KGVLKKGDEIAVKRLPGRSGQ-GLREMKNEASVIAKV-QHKN 146
LGEG FG V K + ++AVK L + + L ++ +E ++ + +HKN
Sbjct: 77 LGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKN 136
Query: 147 LVRLLGCCIDKDEKILIYEYMPNKSLDFFLFDPTKRMLLDWSANYSSR------------ 194
++ LLG C +I EY +L +L + L++S N S
Sbjct: 137 IINLLGACTQDGPLYVIVEYASKGNLREYL-QARRPPGLEYSYNPSHNPEEQLSSKDLVS 195
Query: 195 ---------------------LKVSNILLDKDINPKISDFGMARICGGNELQANTSRIVG 233
L N+L+ +D KI+DFG+AR + T+
Sbjct: 196 CAYQVARGMEYLASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKTTNGRL 255
Query: 234 TYGYMSPEYAIQGIFSIKSDVFSFGVLLLEIVS 266
+M+PE I++ +SDV+SFGVLL EI +
Sbjct: 256 PVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFT 288
>pdb|2PZ5|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549t Mutation Responsible For
Pfeiffer Syndrome
pdb|2PZ5|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549t Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 57/220 (25%), Positives = 95/220 (43%), Gaps = 42/220 (19%)
Query: 89 NKFSDANKLGEGGFGPVY--------KGVLKKGDEIAVKRLPGRSGQ-GLREMKNEASVI 139
+K + LGEG FG V K K+ +AVK L + + L ++ +E ++
Sbjct: 35 DKLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMM 94
Query: 140 AKV-QHKNLVRLLGCCIDKDEKILIYEYMPNKSLDFFL-----------FD----PTKRM 183
+ +HKN++ LLG C +I EY +L +L +D P ++M
Sbjct: 95 KMIGKHKNIITLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQM 154
Query: 184 LLD--WSANYS---------------SRLKVSNILLDKDINPKISDFGMARICGGNELQA 226
S Y L N+L+ ++ KI+DFG+AR +
Sbjct: 155 TFKDLVSCTYQLARGMEYLASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYK 214
Query: 227 NTSRIVGTYGYMSPEYAIQGIFSIKSDVFSFGVLLLEIVS 266
T+ +M+PE +++ +SDV+SFGVL+ EI +
Sbjct: 215 KTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 254
>pdb|2W99|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
pdb|2W9Z|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 58/211 (27%), Positives = 102/211 (48%), Gaps = 33/211 (15%)
Query: 87 ATNKFSDANKLGEGGFGPVYKGV-LKKGDEIAVK--RLP-GRSGQGLREMKNEASV--IA 140
AT+++ ++G G +G VYK G +A+K R+P G G + ++ A + +
Sbjct: 2 ATSRYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGEEGLPISTVREVALLRRLE 61
Query: 141 KVQHKNLVRLLGCC----IDKDEKI-LIYEYMPNKSLDFFL-------------FDPTKR 182
+H N+VRL+ C D++ K+ L++E++ ++ L +L D ++
Sbjct: 62 AFEHPNVVRLMDVCATSRTDREIKVTLVFEHV-DQDLRTYLDKAPPPGLPAETIKDLMRQ 120
Query: 183 ML--LDW-SAN--YSSRLKVSNILLDKDINPKISDFGMARICGGNELQANTSRIVGTYGY 237
L LD+ AN LK NIL+ K++DFG+ARI Q + +V T Y
Sbjct: 121 FLRGLDFLHANCIVHRDLKPENILVTSGGTVKLADFGLARIYS---YQMALAPVVVTLWY 177
Query: 238 MSPEYAIQGIFSIKSDVFSFGVLLLEIVSGK 268
+PE +Q ++ D++S G + E+ K
Sbjct: 178 RAPEVLLQSTYATPVDMWSVGCIFAEMFRRK 208
>pdb|3CKW|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3,
Stk24)
Length = 304
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 45/195 (23%), Positives = 94/195 (48%), Gaps = 19/195 (9%)
Query: 91 FSDANKLGEGGFGPVYKGVLKKGDEIAVKRLPG--RSGQGLREMKNEASVIAKVQHKNLV 148
F+ K+G+G FG V+KG+ + ++ ++ + + +++ E +V+++ +
Sbjct: 9 FTKLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVT 68
Query: 149 RLLGCCIDKDEKILIYEYMPNKS-LDFFLFDPT---------KRMLLDWSANYSSR---- 194
+ G + + +I EY+ S LD P + +L +S +
Sbjct: 69 KYYGSYLKDTKLWIIMEYLGGGSALDLLEPGPLDETQIATILREILKGLDYLHSEKKIHR 128
Query: 195 -LKVSNILLDKDINPKISDFGMARICGGNELQANTSRIVGTYGYMSPEYAIQGIFSIKSD 253
+K +N+LL + K++DFG+A +++ NT VGT +M+PE Q + K+D
Sbjct: 129 DIKAANVLLSEHGEVKLADFGVAGQLTDTQIKRNT--FVGTPFWMAPEVIKQSAYDSKAD 186
Query: 254 VFSFGVLLLEIVSGK 268
++S G+ +E+ G+
Sbjct: 187 IWSLGITAIELARGE 201
>pdb|2PSQ|A Chain A, Crystal Structure Of Unphosphorylated Unactivated Wild
Type Fgf Receptor 2 (Fgfr2) Kinase Domain
pdb|2PSQ|B Chain B, Crystal Structure Of Unphosphorylated Unactivated Wild
Type Fgf Receptor 2 (Fgfr2) Kinase Domain
Length = 370
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 57/220 (25%), Positives = 95/220 (43%), Gaps = 42/220 (19%)
Query: 89 NKFSDANKLGEGGFGPVY--------KGVLKKGDEIAVKRLPGRSGQ-GLREMKNEASVI 139
+K + LGEG FG V K K+ +AVK L + + L ++ +E ++
Sbjct: 81 DKLTLGKPLGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMM 140
Query: 140 AKV-QHKNLVRLLGCCIDKDEKILIYEYMPNKSLDFFL-----------FD----PTKRM 183
+ +HKN++ LLG C +I EY +L +L +D P ++M
Sbjct: 141 KMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQM 200
Query: 184 LLD--WSANYS---------------SRLKVSNILLDKDINPKISDFGMARICGGNELQA 226
S Y L N+L+ ++ KI+DFG+AR +
Sbjct: 201 TFKDLVSCTYQLARGMEYLASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYK 260
Query: 227 NTSRIVGTYGYMSPEYAIQGIFSIKSDVFSFGVLLLEIVS 266
T+ +M+PE +++ +SDV+SFGVL+ EI +
Sbjct: 261 KTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 300
>pdb|1OIR|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-Dependent Kinase Inhibitors Identified Through
Structure-Based Hybridisation
Length = 299
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 51/203 (25%), Positives = 96/203 (47%), Gaps = 31/203 (15%)
Query: 91 FSDANKLGEGGFGPVYKGVLK-KGDEIAVKRL------PGRSGQGLREMKNEASVIAKVQ 143
F K+GEG +G VYK K G+ +A+ ++ G +RE+ S++ ++
Sbjct: 5 FQKVEKIGEGTYGVVYKARNKLTGEVVALXKIRLDTETEGVPSTAIREI----SLLKELN 60
Query: 144 HKNLVRLLGCCIDKDEKILIYEYM----------------PNKSLDFFLFDPTKRMLLDW 187
H N+V+LL +++ L++E++ P + +LF + +
Sbjct: 61 HPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCH 120
Query: 188 SANYSSR-LKVSNILLDKDINPKISDFGMARICGGNELQANTSRIVGTYGYMSPEYAIQ- 245
S R LK N+L++ + K++DFG+AR G ++ T +V T Y +PE +
Sbjct: 121 SHRVLHRDLKPQNLLINTEGAIKLADFGLAR-AFGVPVRTYTHEVV-TLWYRAPEILLGC 178
Query: 246 GIFSIKSDVFSFGVLLLEIVSGK 268
+S D++S G + E+V+ +
Sbjct: 179 KYYSTAVDIWSLGCIFAEMVTRR 201
>pdb|1H01|A Chain A, Cdk2 In Complex With A Disubstituted 2, 4-Bis Anilino
Pyrimidine Cdk4 Inhibitor
Length = 298
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 51/203 (25%), Positives = 96/203 (47%), Gaps = 31/203 (15%)
Query: 91 FSDANKLGEGGFGPVYKGVLK-KGDEIAVKRL------PGRSGQGLREMKNEASVIAKVQ 143
F K+GEG +G VYK K G+ +A+ ++ G +RE+ S++ ++
Sbjct: 4 FQKVEKIGEGTYGVVYKARNKLTGEVVALXKIRLDTETEGVPSTAIREI----SLLKELN 59
Query: 144 HKNLVRLLGCCIDKDEKILIYEYM----------------PNKSLDFFLFDPTKRMLLDW 187
H N+V+LL +++ L++E++ P + +LF + +
Sbjct: 60 HPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCH 119
Query: 188 SANYSSR-LKVSNILLDKDINPKISDFGMARICGGNELQANTSRIVGTYGYMSPEYAIQ- 245
S R LK N+L++ + K++DFG+AR G ++ T +V T Y +PE +
Sbjct: 120 SHRVLHRDLKPQNLLINTEGAIKLADFGLAR-AFGVPVRTYTHEVV-TLWYRAPEILLGC 177
Query: 246 GIFSIKSDVFSFGVLLLEIVSGK 268
+S D++S G + E+V+ +
Sbjct: 178 KYYSTAVDIWSLGCIFAEMVTRR 200
>pdb|1QMZ|A Chain A, Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Complex
pdb|1QMZ|C Chain C, Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Complex
pdb|1GY3|A Chain A, Pcdk2CYCLIN A IN COMPLEX WITH MGADP, NITRATE AND PEPTIDE
SUBSTRATE
pdb|1GY3|C Chain C, Pcdk2CYCLIN A IN COMPLEX WITH MGADP, NITRATE AND PEPTIDE
SUBSTRATE
pdb|1P5E|A Chain A, The Strucure Of Phospho-Cdk2CYCLIN A IN COMPLEX WITH THE
Inhibitor 4,5,6,7-Tetrabromobenzotriazole (Tbs)
pdb|1P5E|C Chain C, The Strucure Of Phospho-Cdk2CYCLIN A IN COMPLEX WITH THE
Inhibitor 4,5,6,7-Tetrabromobenzotriazole (Tbs)
pdb|2CCH|A Chain A, The Crystal Structure Of Cdk2 Cyclin A In Complex With A
Substrate Peptide Derived From Cdc Modified With A
Gamma- Linked Atp Analogue
pdb|2CCH|C Chain C, The Crystal Structure Of Cdk2 Cyclin A In Complex With A
Substrate Peptide Derived From Cdc Modified With A
Gamma- Linked Atp Analogue
pdb|2CCI|A Chain A, Crystal Structure Of Phospho-Cdk2 Cyclin A In Complex With
A Peptide Containing Both The Substrate And Recruitment
Sites Of Cdc6
pdb|2CCI|C Chain C, Crystal Structure Of Phospho-Cdk2 Cyclin A In Complex With
A Peptide Containing Both The Substrate And Recruitment
Sites Of Cdc6
pdb|2G9X|A Chain A, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
COMPLEX WITH THE Inhibitor Nu6271
pdb|2G9X|C Chain C, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
COMPLEX WITH THE Inhibitor Nu6271
pdb|3DDP|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Cr8
pdb|3DDP|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Cr8
pdb|3DDQ|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Roscovitine
pdb|3DDQ|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Roscovitine
pdb|3DOG|A Chain A, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
Complex With The Inhibitor N-&-N1
pdb|3DOG|C Chain C, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
Complex With The Inhibitor N-&-N1
Length = 299
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 51/203 (25%), Positives = 96/203 (47%), Gaps = 31/203 (15%)
Query: 91 FSDANKLGEGGFGPVYKGVLK-KGDEIAVKRL------PGRSGQGLREMKNEASVIAKVQ 143
F K+GEG +G VYK K G+ +A+K++ G +RE+ S++ ++
Sbjct: 5 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREI----SLLKELN 60
Query: 144 HKNLVRLLGCCIDKDEKILIYEYM----------------PNKSLDFFLFDPTKRMLLDW 187
H N+V+LL +++ L++E++ P + +LF + +
Sbjct: 61 HPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCH 120
Query: 188 SANYSSR-LKVSNILLDKDINPKISDFGMARICGGNELQANTSRIVGTYGYMSPEYAIQ- 245
S R LK N+L++ + K++DFG+AR G ++ +V T Y +PE +
Sbjct: 121 SHRVLHRDLKPQNLLINTEGAIKLADFGLAR-AFGVPVRTYXHEVV-TLWYRAPEILLGC 178
Query: 246 GIFSIKSDVFSFGVLLLEIVSGK 268
+S D++S G + E+V+ +
Sbjct: 179 KYYSTAVDIWSLGCIFAEMVTRR 201
>pdb|2E9V|A Chain A, Structure Of H-Chk1 Complexed With A859017
pdb|2E9V|B Chain B, Structure Of H-Chk1 Complexed With A859017
Length = 268
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 51/191 (26%), Positives = 89/191 (46%), Gaps = 19/191 (9%)
Query: 97 LGEGGFGPVYKGVLKKGDE-IAVKRLPGRSGQGLRE-MKNEASVIAKVQHKNLVRLLGCC 154
LGEG +G V V + +E +AVK + + E +K E + + H+N+V+ G
Sbjct: 14 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHR 73
Query: 155 IDKDEKILIYEY---------------MPNKSLDFFLFDPTKRMLLDWSANYSSR-LKVS 198
+ + + L EY MP F ++ + R +K
Sbjct: 74 REGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIGITHRDIKPE 133
Query: 199 NILLDKDINPKISDFGMARICGGNELQANTSRIVGTYGYMSPEYAIQGIFSIKS-DVFSF 257
N+LLD+ N KISDFG+A + N + +++ GT Y++PE + F + DV+S
Sbjct: 134 NLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSC 193
Query: 258 GVLLLEIVSGK 268
G++L +++G+
Sbjct: 194 GIVLTAMLAGE 204
>pdb|4F1M|A Chain A, Crystal Structure Of The G1179s Roco4 Kinase Domain Bound
To Appcp From D. Discoideum
Length = 287
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 64/292 (21%), Positives = 126/292 (43%), Gaps = 54/292 (18%)
Query: 85 STATNKFSDANKLGEGGFGPVYKGVLKKGDE-IAVKRLPGRSGQG-------LREMKNEA 136
+ A N+ ++G+GGFG V+KG L K +A+K L +G +E + E
Sbjct: 15 TLADNEIEYEKQIGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQREV 74
Query: 137 SVIAKVQHKNLVRLLGCCIDKDEKILIYEYMPNKSLDFFLFD---PTK-----RMLLDWS 188
+++ + H N+V+L G + ++ E++P L L D P K R++LD +
Sbjct: 75 FIMSNLNHPNIVKLYGLMHNPPR--MVMEFVPCGDLYHRLLDKAHPIKWSVKLRLMLDIA 132
Query: 189 AN-----------YSSRLKVSNILL-----DKDINPKISDFGMARICGGNELQANTSRIV 232
L+ NI L + + K++DF +++ + + S ++
Sbjct: 133 LGIEYMQNQNPPIVHRDLRSPNIFLQSLDENAPVCAKVADFSLSQ-----QSVHSVSGLL 187
Query: 233 GTYGYMSPEY--AIQGIFSIKSDVFSFGVLLLEIVSGKKTTGFYRTDSLTLLGYAWDLWT 290
G + +M+PE A + ++ K+D +SF ++L I++G+ Y + + +
Sbjct: 188 GNFQWMAPETIGAEEESYTEKADTYSFAMILYTILTGEGPFDEYSYGKIKFINMIRE--- 244
Query: 291 SNRTLELIDPILEDEYSSKHMLLRYVNIALLCVQESADDRPTMNEVVSMLTD 342
E + P + ++ R N+ LC RP + +V L++
Sbjct: 245 -----EGLRPTIPEDCPP-----RLRNVIELCWSGDPKKRPHFSYIVKELSE 286
>pdb|1W98|A Chain A, The Structural Basis Of Cdk2 Activation By Cyclin E
pdb|4EOR|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Nu6102
pdb|4EOR|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Nu6102
Length = 298
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 51/203 (25%), Positives = 96/203 (47%), Gaps = 31/203 (15%)
Query: 91 FSDANKLGEGGFGPVYKGVLK-KGDEIAVKRL------PGRSGQGLREMKNEASVIAKVQ 143
F K+GEG +G VYK K G+ +A+K++ G +RE+ S++ ++
Sbjct: 5 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREI----SLLKELN 60
Query: 144 HKNLVRLLGCCIDKDEKILIYEYM----------------PNKSLDFFLFDPTKRMLLDW 187
H N+V+LL +++ L++E++ P + +LF + +
Sbjct: 61 HPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCH 120
Query: 188 SANYSSR-LKVSNILLDKDINPKISDFGMARICGGNELQANTSRIVGTYGYMSPEYAIQ- 245
S R LK N+L++ + K++DFG+AR G ++ +V T Y +PE +
Sbjct: 121 SHRVLHRDLKPQNLLINTEGAIKLADFGLAR-AFGVPVRTYXHEVV-TLWYRAPEILLGC 178
Query: 246 GIFSIKSDVFSFGVLLLEIVSGK 268
+S D++S G + E+V+ +
Sbjct: 179 KYYSTAVDIWSLGCIFAEMVTRR 201
>pdb|1JST|A Chain A, Phosphorylated Cyclin-Dependent Kinase-2 Bound To Cyclin A
pdb|1JST|C Chain C, Phosphorylated Cyclin-Dependent Kinase-2 Bound To Cyclin A
pdb|1JSU|A Chain A, P27(Kip1)CYCLIN ACDK2 COMPLEX
pdb|1FQ1|B Chain B, Crystal Structure Of Kinase Associated Phosphatase (Kap)
In Complex With Phospho-Cdk2
pdb|2C6T|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6T|C Chain C, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2CJM|A Chain A, Mechanism Of Cdk Inhibition By Active Site
Phosphorylation: Cdk2 Y15p T160p In Complex With Cyclin
A Structure
pdb|2CJM|C Chain C, Mechanism Of Cdk Inhibition By Active Site
Phosphorylation: Cdk2 Y15p T160p In Complex With Cyclin
A Structure
pdb|2UZB|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZB|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZD|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZD|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZE|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZE|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZL|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZL|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|4II5|A Chain A, Structure Of Pcdk2/cyclina Bound To Adp And 1 Magnesium
Ion
pdb|4II5|C Chain C, Structure Of Pcdk2/cyclina Bound To Adp And 1 Magnesium
Ion
Length = 298
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 51/203 (25%), Positives = 96/203 (47%), Gaps = 31/203 (15%)
Query: 91 FSDANKLGEGGFGPVYKGVLK-KGDEIAVKRL------PGRSGQGLREMKNEASVIAKVQ 143
F K+GEG +G VYK K G+ +A+K++ G +RE+ S++ ++
Sbjct: 4 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREI----SLLKELN 59
Query: 144 HKNLVRLLGCCIDKDEKILIYEYM----------------PNKSLDFFLFDPTKRMLLDW 187
H N+V+LL +++ L++E++ P + +LF + +
Sbjct: 60 HPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCH 119
Query: 188 SANYSSR-LKVSNILLDKDINPKISDFGMARICGGNELQANTSRIVGTYGYMSPEYAIQ- 245
S R LK N+L++ + K++DFG+AR G ++ +V T Y +PE +
Sbjct: 120 SHRVLHRDLKPQNLLINTEGAIKLADFGLAR-AFGVPVRTYXHEVV-TLWYRAPEILLGC 177
Query: 246 GIFSIKSDVFSFGVLLLEIVSGK 268
+S D++S G + E+V+ +
Sbjct: 178 KYYSTAVDIWSLGCIFAEMVTRR 200
>pdb|3BHY|A Chain A, Crystal Structure Of Human Death Associated Protein Kinase
3 (Dapk3) In Complex With A Beta-Carboline Ligand
pdb|3BQR|A Chain A, Crystal Structure Of Human Death Associated Protein Kinase
3 (Dapk3) In Complex With An Imidazo-Pyridazine Ligand
Length = 283
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 61/211 (28%), Positives = 99/211 (46%), Gaps = 32/211 (15%)
Query: 85 STATNKFSDANKLGEGGFGPVYKGVLK-KGDEIAVK-----RLPG-RSGQGLREMKNEAS 137
S + + +LG G F V K K G E A K RL R G E++ E +
Sbjct: 1 SMVEDHYEMGEELGSGQFAIVRKCRQKGTGKEYAAKFIKKRRLSSSRRGVSREEIEREVN 60
Query: 138 VIAKVQHKNLVRLLGCCIDKDEKILIYEYMPNKSLDFFLFDPTK----------RMLLDW 187
++ +++H N++ L +K + +LI E + L FL + + +LD
Sbjct: 61 ILREIRHPNIITLHDIFENKTDVVLILELVSGGELFDFLAEKESLTEDEATQFLKQILDG 120
Query: 188 SANYSSR------LKVSNI-LLDKDI-NPKIS--DFGMA-RICGGNELQANTSRIVGTYG 236
S+ LK NI LLDK++ NP+I DFG+A +I GNE + I GT
Sbjct: 121 VHYLHSKRIAHFDLKPENIMLLDKNVPNPRIKLIDFGIAHKIEAGNEFK----NIFGTPE 176
Query: 237 YMSPEYAIQGIFSIKSDVFSFGVLLLEIVSG 267
+++PE +++D++S GV+ ++SG
Sbjct: 177 FVAPEIVNYEPLGLEADMWSIGVITYILLSG 207
>pdb|4FSM|A Chain A, Crystal Structure Of The Chk1
pdb|4FSQ|A Chain A, Crystal Structure Of The Chk1
pdb|4FSR|A Chain A, Crystal Structure Of The Chk1
pdb|4FT0|A Chain A, Crystal Structure Of The Chk1
pdb|4FT5|A Chain A, Crystal Structure Of The Chk1
pdb|4FT7|A Chain A, Crystal Structure Of The Chk1
pdb|4FT9|A Chain A, Crystal Structure Of The Chk1
pdb|4FTI|A Chain A, Crystal Structure Of The Chk1
pdb|4FTJ|A Chain A, Crystal Structure Of The Chk1
pdb|4FTK|A Chain A, Crystal Structure Of The Chk1
pdb|4FTL|A Chain A, Crystal Structure Of The Chk1
pdb|4FTM|A Chain A, Crystal Structure Of The Chk1
pdb|4FTO|A Chain A, Crystal Structure Of The Chk1
pdb|4FTR|A Chain A, Crystal Structure Of The Chk1
pdb|4FTT|A Chain A, Crystal Structure Of The Chk1
pdb|4FTU|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 51/191 (26%), Positives = 89/191 (46%), Gaps = 19/191 (9%)
Query: 97 LGEGGFGPVYKGVLKKGDE-IAVKRLPGRSGQGLRE-MKNEASVIAKVQHKNLVRLLGCC 154
LGEG +G V V + +E +AVK + + E +K E + + H+N+V+ G
Sbjct: 14 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHR 73
Query: 155 IDKDEKILIYEY---------------MPNKSLDFFLFDPTKRMLLDWSANYSSR-LKVS 198
+ + + L EY MP F ++ + R +K
Sbjct: 74 REGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIGITHRDIKPE 133
Query: 199 NILLDKDINPKISDFGMARICGGNELQANTSRIVGTYGYMSPEYAIQGIFSIKS-DVFSF 257
N+LLD+ N KISDFG+A + N + +++ GT Y++PE + F + DV+S
Sbjct: 134 NLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSC 193
Query: 258 GVLLLEIVSGK 268
G++L +++G+
Sbjct: 194 GIVLTAMLAGE 204
>pdb|3LCO|A Chain A, Inhibitor Bound To A Dfg-Out Structure Of The Kinase
Domain Of Csf-1r
Length = 324
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 61/227 (26%), Positives = 96/227 (42%), Gaps = 51/227 (22%)
Query: 89 NKFSDANKLGEGGFGPVYKGV---LKKGD---EIAVKRLPGRSGQGLRE-MKNEASVIAK 141
N LG G FG V + L K D ++AVK L + +E + +E +++
Sbjct: 31 NNLQFGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSH 90
Query: 142 V-QHKNLVRLLGCCIDKDEKILIYEYMPNKSLDFFLF---------------DPTK---- 181
+ QH+N+V LLG C ++I EY L FL DP
Sbjct: 91 LGQHENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKAEAMLGPSLAPGQDPEGLDKE 150
Query: 182 -------RMLLDWSANYSSRLK-------------VSNILLDKDINPKISDFGMAR--IC 219
R LL +S+ + + N+LL KI DFG+AR +
Sbjct: 151 DGRPLELRDLLHFSSQVAQGMAFLASKNCIHRDVAARNVLLTNGHVAKIGDFGLARDIMN 210
Query: 220 GGNELQANTSRIVGTYGYMSPEYAIQGIFSIKSDVFSFGVLLLEIVS 266
N + +R+ +M+PE +++++SDV+S+G+LL EI S
Sbjct: 211 DSNYIVKGNARL--PVKWMAPESIFDCVYTVQSDVWSYGILLWEIFS 255
>pdb|2AYP|A Chain A, Crystal Structure Of Chk1 With An Indol Inhibitor
Length = 269
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 51/191 (26%), Positives = 89/191 (46%), Gaps = 19/191 (9%)
Query: 97 LGEGGFGPVYKGVLKKGDE-IAVKRLPGRSGQGLRE-MKNEASVIAKVQHKNLVRLLGCC 154
LGEG +G V V + +E +AVK + + E +K E + + H+N+V+ G
Sbjct: 15 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHR 74
Query: 155 IDKDEKILIYEY---------------MPNKSLDFFLFDPTKRMLLDWSANYSSR-LKVS 198
+ + + L EY MP F ++ + R +K
Sbjct: 75 REGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIGITHRDIKPE 134
Query: 199 NILLDKDINPKISDFGMARICGGNELQANTSRIVGTYGYMSPEYAIQGIFSIKS-DVFSF 257
N+LLD+ N KISDFG+A + N + +++ GT Y++PE + F + DV+S
Sbjct: 135 NLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSC 194
Query: 258 GVLLLEIVSGK 268
G++L +++G+
Sbjct: 195 GIVLTAMLAGE 205
>pdb|2GHG|A Chain A, H-Chk1 Complexed With A431994
pdb|2YWP|A Chain A, Crystal Structure Of Chk1 With A Urea Inhibitor
pdb|2E9N|A Chain A, Structure Of H-chk1 Complexed With A767085
pdb|2E9O|A Chain A, Structure Of H-Chk1 Complexed With Aa582939
pdb|2E9P|A Chain A, Structure Of H-Chk1 Complexed With A771129
pdb|2E9U|A Chain A, Structure Of H-Chk1 Complexed With A780125
Length = 269
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 51/191 (26%), Positives = 89/191 (46%), Gaps = 19/191 (9%)
Query: 97 LGEGGFGPVYKGVLKKGDE-IAVKRLPGRSGQGLRE-MKNEASVIAKVQHKNLVRLLGCC 154
LGEG +G V V + +E +AVK + + E +K E + + H+N+V+ G
Sbjct: 14 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHR 73
Query: 155 IDKDEKILIYEY---------------MPNKSLDFFLFDPTKRMLLDWSANYSSR-LKVS 198
+ + + L EY MP F ++ + R +K
Sbjct: 74 REGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIGITHRDIKPE 133
Query: 199 NILLDKDINPKISDFGMARICGGNELQANTSRIVGTYGYMSPEYAIQGIFSIKS-DVFSF 257
N+LLD+ N KISDFG+A + N + +++ GT Y++PE + F + DV+S
Sbjct: 134 NLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSC 193
Query: 258 GVLLLEIVSGK 268
G++L +++G+
Sbjct: 194 GIVLTAMLAGE 204
>pdb|4I3Z|A Chain A, Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNESIUM
IONS
pdb|4I3Z|C Chain C, Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNESIUM
IONS
Length = 296
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 51/203 (25%), Positives = 96/203 (47%), Gaps = 31/203 (15%)
Query: 91 FSDANKLGEGGFGPVYKGVLK-KGDEIAVKRL------PGRSGQGLREMKNEASVIAKVQ 143
F K+GEG +G VYK K G+ +A+K++ G +RE+ S++ ++
Sbjct: 4 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREI----SLLKELN 59
Query: 144 HKNLVRLLGCCIDKDEKILIYEYM----------------PNKSLDFFLFDPTKRMLLDW 187
H N+V+LL +++ L++E++ P + +LF + +
Sbjct: 60 HPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCH 119
Query: 188 SANYSSR-LKVSNILLDKDINPKISDFGMARICGGNELQANTSRIVGTYGYMSPEYAIQ- 245
S R LK N+L++ + K++DFG+AR G ++ +V T Y +PE +
Sbjct: 120 SHRVLHRDLKPQNLLINTEGAIKLADFGLAR-AFGVPVRTYXHEVV-TLWYRAPEILLGC 177
Query: 246 GIFSIKSDVFSFGVLLLEIVSGK 268
+S D++S G + E+V+ +
Sbjct: 178 KYYSTAVDIWSLGCIFAEMVTRR 200
>pdb|3ZHP|C Chain C, Human Mst3 (stk24) In Complex With Mo25beta
pdb|3ZHP|D Chain D, Human Mst3 (stk24) In Complex With Mo25beta
Length = 294
Score = 55.8 bits (133), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 45/195 (23%), Positives = 94/195 (48%), Gaps = 19/195 (9%)
Query: 91 FSDANKLGEGGFGPVYKGVLKKGDEIAVKRLPG--RSGQGLREMKNEASVIAKVQHKNLV 148
F+ K+G+G FG V+KG+ + ++ ++ + + +++ E +V+++ +
Sbjct: 29 FTKLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVT 88
Query: 149 RLLGCCIDKDEKILIYEYMPNKS-LDFFLFDPT---------KRMLLDWSANYSSR---- 194
+ G + + +I EY+ S LD P + +L +S +
Sbjct: 89 KYYGSYLKDTKLWIIMEYLGGGSALDLLEPGPLDETQIATILREILKGLDYLHSEKKIHR 148
Query: 195 -LKVSNILLDKDINPKISDFGMARICGGNELQANTSRIVGTYGYMSPEYAIQGIFSIKSD 253
+K +N+LL + K++DFG+A +++ NT VGT +M+PE Q + K+D
Sbjct: 149 DIKAANVLLSEHGEVKLADFGVAGQLTDTQIKRNT--FVGTPFWMAPEVIKQSAYDSKAD 206
Query: 254 VFSFGVLLLEIVSGK 268
++S G+ +E+ G+
Sbjct: 207 IWSLGITAIELARGE 221
>pdb|1E9H|A Chain A, Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex With
The Inhibitor Indirubin-5-Sulphonate Bound
pdb|1E9H|C Chain C, Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex With
The Inhibitor Indirubin-5-Sulphonate Bound
pdb|1PKD|A Chain A, The Crystal Structure Of Ucn-01 In Complex With Phospho-
Cdk2CYCLIN A
pdb|1PKD|C Chain C, The Crystal Structure Of Ucn-01 In Complex With Phospho-
Cdk2CYCLIN A
Length = 297
Score = 55.8 bits (133), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 51/203 (25%), Positives = 96/203 (47%), Gaps = 31/203 (15%)
Query: 91 FSDANKLGEGGFGPVYKGVLK-KGDEIAVKRL------PGRSGQGLREMKNEASVIAKVQ 143
F K+GEG +G VYK K G+ +A+K++ G +RE+ S++ ++
Sbjct: 5 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREI----SLLKELN 60
Query: 144 HKNLVRLLGCCIDKDEKILIYEYM----------------PNKSLDFFLFDPTKRMLLDW 187
H N+V+LL +++ L++E++ P + +LF + +
Sbjct: 61 HPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCH 120
Query: 188 SANYSSR-LKVSNILLDKDINPKISDFGMARICGGNELQANTSRIVGTYGYMSPEYAIQ- 245
S R LK N+L++ + K++DFG+AR G ++ +V T Y +PE +
Sbjct: 121 SHRVLHRDLKPQNLLINTEGAIKLADFGLAR-AFGVPVRTYXHEVV-TLWYRAPEILLGC 178
Query: 246 GIFSIKSDVFSFGVLLLEIVSGK 268
+S D++S G + E+V+ +
Sbjct: 179 KYYSTAVDIWSLGCIFAEMVTRR 201
>pdb|4EOS|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Ro3306
pdb|4EOS|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Ro3306
Length = 300
Score = 55.8 bits (133), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 51/203 (25%), Positives = 96/203 (47%), Gaps = 31/203 (15%)
Query: 91 FSDANKLGEGGFGPVYKGVLK-KGDEIAVKRL------PGRSGQGLREMKNEASVIAKVQ 143
F K+GEG +G VYK K G+ +A+K++ G +RE+ S++ ++
Sbjct: 7 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREI----SLLKELN 62
Query: 144 HKNLVRLLGCCIDKDEKILIYEYM----------------PNKSLDFFLFDPTKRMLLDW 187
H N+V+LL +++ L++E++ P + +LF + +
Sbjct: 63 HPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCH 122
Query: 188 SANYSSR-LKVSNILLDKDINPKISDFGMARICGGNELQANTSRIVGTYGYMSPEYAIQ- 245
S R LK N+L++ + K++DFG+AR G ++ +V T Y +PE +
Sbjct: 123 SHRVLHRDLKPQNLLINTEGAIKLADFGLAR-AFGVPVRTYXHEVV-TLWYRAPEILLGC 180
Query: 246 GIFSIKSDVFSFGVLLLEIVSGK 268
+S D++S G + E+V+ +
Sbjct: 181 KYYSTAVDIWSLGCIFAEMVTRR 203
>pdb|2JGZ|A Chain A, Crystal Structure Of Phospho-Cdk2 In Complex With Cyclin B
Length = 289
Score = 55.8 bits (133), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 51/203 (25%), Positives = 96/203 (47%), Gaps = 31/203 (15%)
Query: 91 FSDANKLGEGGFGPVYKGVLK-KGDEIAVKRL------PGRSGQGLREMKNEASVIAKVQ 143
F K+GEG +G VYK K G+ +A+K++ G +RE+ S++ ++
Sbjct: 5 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREI----SLLKELN 60
Query: 144 HKNLVRLLGCCIDKDEKILIYEYM----------------PNKSLDFFLFDPTKRMLLDW 187
H N+V+LL +++ L++E++ P + +LF + +
Sbjct: 61 HPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCH 120
Query: 188 SANYSSR-LKVSNILLDKDINPKISDFGMARICGGNELQANTSRIVGTYGYMSPEYAIQ- 245
S R LK N+L++ + K++DFG+AR G ++ +V T Y +PE +
Sbjct: 121 SHRVLHRDLKPQNLLINTEGAIKLADFGLAR-AFGVPVRTYXHEVV-TLWYRAPEILLGC 178
Query: 246 GIFSIKSDVFSFGVLLLEIVSGK 268
+S D++S G + E+V+ +
Sbjct: 179 KYYSTAVDIWSLGCIFAEMVTRR 201
>pdb|2IW6|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW6|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW9|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW9|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
Length = 302
Score = 55.8 bits (133), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 51/201 (25%), Positives = 95/201 (47%), Gaps = 31/201 (15%)
Query: 91 FSDANKLGEGGFGPVYKGVLK-KGDEIAVKRL------PGRSGQGLREMKNEASVIAKVQ 143
F K+GEG +G VYK K G+ +A+K++ G +RE+ S++ ++
Sbjct: 8 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREI----SLLKELN 63
Query: 144 HKNLVRLLGCCIDKDEKILIYEYM----------------PNKSLDFFLFDPTKRMLLDW 187
H N+V+LL +++ L++E++ P + +LF + +
Sbjct: 64 HPNIVKLLDVIHTENKLYLVFEFLHQDLKTFMDASALTGIPLPLIKSYLFQLLQGLAFCH 123
Query: 188 SANYSSR-LKVSNILLDKDINPKISDFGMARICGGNELQANTSRIVGTYGYMSPEYAIQ- 245
S R LK N+L++ + K++DFG+AR G ++ +V T Y +PE +
Sbjct: 124 SHRVLHRDLKPQNLLINTEGAIKLADFGLAR-AFGVPVRTYXHEVV-TLWYRAPEILLGC 181
Query: 246 GIFSIKSDVFSFGVLLLEIVS 266
+S D++S G + E+V+
Sbjct: 182 KYYSTAVDIWSLGCIFAEMVT 202
>pdb|4FSN|A Chain A, Crystal Structure Of The Chk1
Length = 278
Score = 55.8 bits (133), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 51/191 (26%), Positives = 89/191 (46%), Gaps = 19/191 (9%)
Query: 97 LGEGGFGPVYKGVLKKGDE-IAVKRLPGRSGQGLRE-MKNEASVIAKVQHKNLVRLLGCC 154
LGEG +G V V + +E +AVK + + E +K E + + H+N+V+ G
Sbjct: 13 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHR 72
Query: 155 IDKDEKILIYEY---------------MPNKSLDFFLFDPTKRMLLDWSANYSSR-LKVS 198
+ + + L EY MP F ++ + R +K
Sbjct: 73 REGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIGITHRDIKPE 132
Query: 199 NILLDKDINPKISDFGMARICGGNELQANTSRIVGTYGYMSPEYAIQGIFSIKS-DVFSF 257
N+LLD+ N KISDFG+A + N + +++ GT Y++PE + F + DV+S
Sbjct: 133 NLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSC 192
Query: 258 GVLLLEIVSGK 268
G++L +++G+
Sbjct: 193 GIVLTAMLAGE 203
>pdb|4FSY|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 55.8 bits (133), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 51/191 (26%), Positives = 89/191 (46%), Gaps = 19/191 (9%)
Query: 97 LGEGGFGPVYKGVLKKGDE-IAVKRLPGRSGQGLRE-MKNEASVIAKVQHKNLVRLLGCC 154
LGEG +G V V + +E +AVK + + E +K E + + H+N+V+ G
Sbjct: 14 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEIXINKMLNHENVVKFYGHR 73
Query: 155 IDKDEKILIYEY---------------MPNKSLDFFLFDPTKRMLLDWSANYSSR-LKVS 198
+ + + L EY MP F ++ + R +K
Sbjct: 74 REGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIGITHRDIKPE 133
Query: 199 NILLDKDINPKISDFGMARICGGNELQANTSRIVGTYGYMSPEYAIQGIFSIKS-DVFSF 257
N+LLD+ N KISDFG+A + N + +++ GT Y++PE + F + DV+S
Sbjct: 134 NLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSC 193
Query: 258 GVLLLEIVSGK 268
G++L +++G+
Sbjct: 194 GIVLTAMLAGE 204
>pdb|3OT3|A Chain A, X-Ray Crystal Structure Of Compound 22k Bound To Human
Chk1 Kinase Domain
pdb|3OT8|A Chain A, X-Ray Crystal Structure Of Compound 17r Bound To Human
Chk1 Kinase Domain
pdb|3PA3|A Chain A, X-Ray Crystal Structure Of Compound 70 Bound To Human Chk1
Kinase Domain
pdb|3PA4|A Chain A, X-Ray Crystal Structure Of Compound 2a Bound To Human Chk1
Kinase Domain
pdb|3PA5|A Chain A, X-Ray Crystal Structure Of Compound 1 Bound To Human Chk1
Kinase Domain
pdb|3U9N|A Chain A, X-Ray Crystal Structure Of Compound 1 Bound To Human Chk1
Kinase Domain
Length = 273
Score = 55.8 bits (133), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 51/191 (26%), Positives = 89/191 (46%), Gaps = 19/191 (9%)
Query: 97 LGEGGFGPVYKGVLKKGDE-IAVKRLPGRSGQGLRE-MKNEASVIAKVQHKNLVRLLGCC 154
LGEG +G V V + +E +AVK + + E +K E + + H+N+V+ G
Sbjct: 14 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHR 73
Query: 155 IDKDEKILIYEY---------------MPNKSLDFFLFDPTKRMLLDWSANYSSR-LKVS 198
+ + + L EY MP F ++ + R +K
Sbjct: 74 REGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIGITHRDIKPE 133
Query: 199 NILLDKDINPKISDFGMARICGGNELQANTSRIVGTYGYMSPEYAIQGIFSIKS-DVFSF 257
N+LLD+ N KISDFG+A + N + +++ GT Y++PE + F + DV+S
Sbjct: 134 NLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSC 193
Query: 258 GVLLLEIVSGK 268
G++L +++G+
Sbjct: 194 GIVLTAMLAGE 204
>pdb|3BHT|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 3
pdb|3BHT|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 3
pdb|3BHU|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 5
pdb|3BHU|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 5
pdb|3BHV|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Variolin B
pdb|3BHV|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Variolin B
pdb|3MY5|A Chain A, Cdk2CYCLINA IN COMPLEX WITH DRB
pdb|3MY5|C Chain C, Cdk2CYCLINA IN COMPLEX WITH DRB
pdb|3TNW|A Chain A, Structure Of Cdk2CYCLIN A IN COMPLEX WITH CAN508
pdb|3TNW|C Chain C, Structure Of Cdk2CYCLIN A IN COMPLEX WITH CAN508
pdb|4BCO|A Chain A, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCO|C Chain C, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 300
Score = 55.8 bits (133), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 51/203 (25%), Positives = 96/203 (47%), Gaps = 31/203 (15%)
Query: 91 FSDANKLGEGGFGPVYKGVLK-KGDEIAVKRL------PGRSGQGLREMKNEASVIAKVQ 143
F K+GEG +G VYK K G+ +A+K++ G +RE+ S++ ++
Sbjct: 6 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREI----SLLKELN 61
Query: 144 HKNLVRLLGCCIDKDEKILIYEYM----------------PNKSLDFFLFDPTKRMLLDW 187
H N+V+LL +++ L++E++ P + +LF + +
Sbjct: 62 HPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCH 121
Query: 188 SANYSSR-LKVSNILLDKDINPKISDFGMARICGGNELQANTSRIVGTYGYMSPEYAIQ- 245
S R LK N+L++ + K++DFG+AR G ++ +V T Y +PE +
Sbjct: 122 SHRVLHRDLKPQNLLINTEGAIKLADFGLAR-AFGVPVRTYXHEVV-TLWYRAPEILLGC 179
Query: 246 GIFSIKSDVFSFGVLLLEIVSGK 268
+S D++S G + E+V+ +
Sbjct: 180 KYYSTAVDIWSLGCIFAEMVTRR 202
>pdb|4EOQ|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With Atp
pdb|4EOQ|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With Atp
Length = 301
Score = 55.8 bits (133), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 51/203 (25%), Positives = 96/203 (47%), Gaps = 31/203 (15%)
Query: 91 FSDANKLGEGGFGPVYKGVLK-KGDEIAVKRL------PGRSGQGLREMKNEASVIAKVQ 143
F K+GEG +G VYK K G+ +A+K++ G +RE+ S++ ++
Sbjct: 8 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREI----SLLKELN 63
Query: 144 HKNLVRLLGCCIDKDEKILIYEYM----------------PNKSLDFFLFDPTKRMLLDW 187
H N+V+LL +++ L++E++ P + +LF + +
Sbjct: 64 HPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCH 123
Query: 188 SANYSSR-LKVSNILLDKDINPKISDFGMARICGGNELQANTSRIVGTYGYMSPEYAIQ- 245
S R LK N+L++ + K++DFG+AR G ++ +V T Y +PE +
Sbjct: 124 SHRVLHRDLKPQNLLINTEGAIKLADFGLAR-AFGVPVRTYXHEVV-TLWYRAPEILLGC 181
Query: 246 GIFSIKSDVFSFGVLLLEIVSGK 268
+S D++S G + E+V+ +
Sbjct: 182 KYYSTAVDIWSLGCIFAEMVTRR 204
>pdb|4EOO|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With Atp
pdb|4EOO|C Chain C, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With Atp
Length = 299
Score = 55.8 bits (133), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 51/203 (25%), Positives = 96/203 (47%), Gaps = 31/203 (15%)
Query: 91 FSDANKLGEGGFGPVYKGVLK-KGDEIAVKRL------PGRSGQGLREMKNEASVIAKVQ 143
F K+GEG +G VYK K G+ +A+K++ G +RE+ S++ ++
Sbjct: 6 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREI----SLLKELN 61
Query: 144 HKNLVRLLGCCIDKDEKILIYEYM----------------PNKSLDFFLFDPTKRMLLDW 187
H N+V+LL +++ L++E++ P + +LF + +
Sbjct: 62 HPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCH 121
Query: 188 SANYSSR-LKVSNILLDKDINPKISDFGMARICGGNELQANTSRIVGTYGYMSPEYAIQ- 245
S R LK N+L++ + K++DFG+AR G ++ +V T Y +PE +
Sbjct: 122 SHRVLHRDLKPENLLINTEGAIKLADFGLAR-AFGVPVRTYXHEVV-TLWYRAPEILLGC 179
Query: 246 GIFSIKSDVFSFGVLLLEIVSGK 268
+S D++S G + E+V+ +
Sbjct: 180 KYYSTAVDIWSLGCIFAEMVTRR 202
>pdb|4BCQ|A Chain A, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCQ|C Chain C, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 301
Score = 55.8 bits (133), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 51/203 (25%), Positives = 96/203 (47%), Gaps = 31/203 (15%)
Query: 91 FSDANKLGEGGFGPVYKGVLK-KGDEIAVKRL------PGRSGQGLREMKNEASVIAKVQ 143
F K+GEG +G VYK K G+ +A+K++ G +RE+ S++ ++
Sbjct: 7 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREI----SLLKELN 62
Query: 144 HKNLVRLLGCCIDKDEKILIYEYM----------------PNKSLDFFLFDPTKRMLLDW 187
H N+V+LL +++ L++E++ P + +LF + +
Sbjct: 63 HPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCH 122
Query: 188 SANYSSR-LKVSNILLDKDINPKISDFGMARICGGNELQANTSRIVGTYGYMSPEYAIQ- 245
S R LK N+L++ + K++DFG+AR G ++ +V T Y +PE +
Sbjct: 123 SHRVLHRDLKPQNLLINTEGAIKLADFGLAR-AFGVPVRTYXHEVV-TLWYRAPEILLGC 180
Query: 246 GIFSIKSDVFSFGVLLLEIVSGK 268
+S D++S G + E+V+ +
Sbjct: 181 KYYSTAVDIWSLGCIFAEMVTRR 203
>pdb|4EOP|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
pdb|4EOP|C Chain C, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
Length = 300
Score = 55.8 bits (133), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 51/203 (25%), Positives = 96/203 (47%), Gaps = 31/203 (15%)
Query: 91 FSDANKLGEGGFGPVYKGVLK-KGDEIAVKRL------PGRSGQGLREMKNEASVIAKVQ 143
F K+GEG +G VYK K G+ +A+K++ G +RE+ S++ ++
Sbjct: 7 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREI----SLLKELN 62
Query: 144 HKNLVRLLGCCIDKDEKILIYEYM----------------PNKSLDFFLFDPTKRMLLDW 187
H N+V+LL +++ L++E++ P + +LF + +
Sbjct: 63 HPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCH 122
Query: 188 SANYSSR-LKVSNILLDKDINPKISDFGMARICGGNELQANTSRIVGTYGYMSPEYAIQ- 245
S R LK N+L++ + K++DFG+AR G ++ +V T Y +PE +
Sbjct: 123 SHRVLHRDLKPENLLINTEGAIKLADFGLAR-AFGVPVRTYXHEVV-TLWYRAPEILLGC 180
Query: 246 GIFSIKSDVFSFGVLLLEIVSGK 268
+S D++S G + E+V+ +
Sbjct: 181 KYYSTAVDIWSLGCIFAEMVTRR 203
>pdb|3KXX|A Chain A, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|B Chain B, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|C Chain C, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|D Chain D, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
Length = 317
Score = 55.8 bits (133), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 57/213 (26%), Positives = 91/213 (42%), Gaps = 44/213 (20%)
Query: 97 LGEGGFGPVY--------KGVLKKGDEIAVKRLPGRSGQ-GLREMKNEASVIAKV-QHKN 146
LGEG FG V K + ++AVK L + + L ++ +E ++ + +HKN
Sbjct: 36 LGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKN 95
Query: 147 LVRLLGCCIDKDEKILIYEYMPNKSLDFFLFDPTKRMLLDWSANYSSR------------ 194
++ LLG C +I EY +L +L + L++S N S
Sbjct: 96 IINLLGACTQDGPLYVIVEYASKGNLREYL-QAREPPGLEYSYNPSHNPEEQLSSKDLVS 154
Query: 195 ---------------------LKVSNILLDKDINPKISDFGMARICGGNELQANTSRIVG 233
L N+L+ +D KI+DFG+AR + T+
Sbjct: 155 CAYQVARGMEYLASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKTTNGRL 214
Query: 234 TYGYMSPEYAIQGIFSIKSDVFSFGVLLLEIVS 266
+M+PE I++ +SDV+SFGVLL EI +
Sbjct: 215 PVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFT 247
>pdb|4EON|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With The Inhibitor Ro3306
pdb|4EON|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With The Inhibitor Ro3306
Length = 300
Score = 55.8 bits (133), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 51/203 (25%), Positives = 96/203 (47%), Gaps = 31/203 (15%)
Query: 91 FSDANKLGEGGFGPVYKGVLK-KGDEIAVKRL------PGRSGQGLREMKNEASVIAKVQ 143
F K+GEG +G VYK K G+ +A+K++ G +RE+ S++ ++
Sbjct: 6 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREI----SLLKELN 61
Query: 144 HKNLVRLLGCCIDKDEKILIYEYM----------------PNKSLDFFLFDPTKRMLLDW 187
H N+V+LL +++ L++E++ P + +LF + +
Sbjct: 62 HPNIVKLLDVIHTENKLYLVFEFLSMDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCH 121
Query: 188 SANYSSR-LKVSNILLDKDINPKISDFGMARICGGNELQANTSRIVGTYGYMSPEYAIQ- 245
S R LK N+L++ + K++DFG+AR G ++ +V T Y +PE +
Sbjct: 122 SHRVLHRDLKPENLLINTEGAIKLADFGLAR-AFGVPVRTYXHEVV-TLWYRAPEILLGC 179
Query: 246 GIFSIKSDVFSFGVLLLEIVSGK 268
+S D++S G + E+V+ +
Sbjct: 180 KYYSTAVDIWSLGCIFAEMVTRR 202
>pdb|4FST|A Chain A, Crystal Structure Of The Chk1
Length = 269
Score = 55.8 bits (133), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 51/191 (26%), Positives = 89/191 (46%), Gaps = 19/191 (9%)
Query: 97 LGEGGFGPVYKGVLKKGDE-IAVKRLPGRSGQGLRE-MKNEASVIAKVQHKNLVRLLGCC 154
LGEG +G V V + +E +AVK + + E +K E + + H+N+V+ G
Sbjct: 14 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHR 73
Query: 155 IDKDEKILIYEY---------------MPNKSLDFFLFDPTKRMLLDWSANYSSR-LKVS 198
+ + + L EY MP F ++ + R +K
Sbjct: 74 REGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIGITHRDIKPE 133
Query: 199 NILLDKDINPKISDFGMARICGGNELQANTSRIVGTYGYMSPEYAIQGIFSIKS-DVFSF 257
N+LLD+ N KISDFG+A + N + +++ GT Y++PE + F + DV+S
Sbjct: 134 NLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGTLPYVAPELLKRREFHAEPVDVWSC 193
Query: 258 GVLLLEIVSGK 268
G++L +++G+
Sbjct: 194 GIVLTAMLAGE 204
>pdb|4EOM|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With Atp
pdb|4EOM|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With Atp
Length = 301
Score = 55.8 bits (133), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 51/203 (25%), Positives = 96/203 (47%), Gaps = 31/203 (15%)
Query: 91 FSDANKLGEGGFGPVYKGVLK-KGDEIAVKRL------PGRSGQGLREMKNEASVIAKVQ 143
F K+GEG +G VYK K G+ +A+K++ G +RE+ S++ ++
Sbjct: 8 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREI----SLLKELN 63
Query: 144 HKNLVRLLGCCIDKDEKILIYEYM----------------PNKSLDFFLFDPTKRMLLDW 187
H N+V+LL +++ L++E++ P + +LF + +
Sbjct: 64 HPNIVKLLDVIHTENKLYLVFEFLSMDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCH 123
Query: 188 SANYSSR-LKVSNILLDKDINPKISDFGMARICGGNELQANTSRIVGTYGYMSPEYAIQ- 245
S R LK N+L++ + K++DFG+AR G ++ +V T Y +PE +
Sbjct: 124 SHRVLHRDLKPENLLINTEGAIKLADFGLAR-AFGVPVRTYXHEVV-TLWYRAPEILLGC 181
Query: 246 GIFSIKSDVFSFGVLLLEIVSGK 268
+S D++S G + E+V+ +
Sbjct: 182 KYYSTAVDIWSLGCIFAEMVTRR 204
>pdb|1Z5M|A Chain A, Crystal Structure Of
N1-[3-[[5-bromo-2-[[3-[(1-pyrrolidinylcarbonyl)
Amino]phenyl]amino]-4-pyrimidinyl]amino]propyl]-2,2-
Dimethylpropanediamide Complexed With Human Pdk1
pdb|2PE0|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
5-Hydroxy-3-[1-(1h-Pyrrol-2-Yl)-Eth-(Z)-Ylidene]-1,
3-Dihydro- Indol-2-One Complex
pdb|2PE1|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
{2-Oxo-3-[1-(1h-Pyrrol-2-Yl)-Eth-(Z)-Ylidene]-2,
3-Dihydro-1h- Indol-5-Yl}-Urea {bx-517} Complex
pdb|2PE2|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
3-{5-[2-Oxo-5-Ureido-1,
2-Dihydro-Indol-(3z)-Ylidenemethyl]-1h-
Pyrrol-3-Yl}-N-(2-Piperidin-1-Yl-Ethyl)-Benzamide
Complex
Length = 286
Score = 55.8 bits (133), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 54/199 (27%), Positives = 85/199 (42%), Gaps = 24/199 (12%)
Query: 91 FSDANKLGEGGFGPVYKG-VLKKGDEIAVKRLPGRSGQGLREMK-----NEASVIAKVQH 144
F LGEG F V L E A+K L R ++E K E V++++ H
Sbjct: 9 FKFGKILGEGSFSTVVLARELATSREYAIKILEKR--HIIKENKVPYVTRERDVMSRLDH 66
Query: 145 KNLVRLLGCCIDKDEKILIYEYMPNKSLDFFL-----FDPTKRML-----------LDWS 188
V+L D ++ Y N L ++ FD T L
Sbjct: 67 PFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGK 126
Query: 189 ANYSSRLKVSNILLDKDINPKISDFGMARICGGNELQANTSRIVGTYGYMSPEYAIQGIF 248
LK NILL++D++ +I+DFG A++ QA + VGT Y+SPE +
Sbjct: 127 GIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSA 186
Query: 249 SIKSDVFSFGVLLLEIVSG 267
SD+++ G ++ ++V+G
Sbjct: 187 CKSSDLWALGCIIYQLVAG 205
>pdb|3QHR|A Chain A, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHR|C Chain C, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHW|A Chain A, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHW|C Chain C, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
Length = 298
Score = 55.8 bits (133), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 51/203 (25%), Positives = 96/203 (47%), Gaps = 31/203 (15%)
Query: 91 FSDANKLGEGGFGPVYKGVLK-KGDEIAVKRL------PGRSGQGLREMKNEASVIAKVQ 143
F K+GEG +G VYK K G+ +A+K++ G +RE+ S++ ++
Sbjct: 6 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREI----SLLKELN 61
Query: 144 HKNLVRLLGCCIDKDEKILIYEYM----------------PNKSLDFFLFDPTKRMLLDW 187
H N+V+LL +++ L++E++ P + +LF + +
Sbjct: 62 HPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCH 121
Query: 188 SANYSSR-LKVSNILLDKDINPKISDFGMARICGGNELQANTSRIVGTYGYMSPEYAIQ- 245
S R LK N+L++ + K++DFG+AR G ++ +V T Y +PE +
Sbjct: 122 SHRVLHRDLKPQNLLINTEGAIKLADFGLAR-AFGVPVRTYXHEVV-TLWYRAPEILLGC 179
Query: 246 GIFSIKSDVFSFGVLLLEIVSGK 268
+S D++S G + E+V+ +
Sbjct: 180 KYYSTAVDIWSLGCIFAEMVTRR 202
>pdb|1OGU|A Chain A, Structure Of Human Thr160-phospho Cdk2/cyclin A Complexed
With A
2-arylamino-4-cyclohexylmethyl-5-nitroso-6-
aminopyrimidine Inhibitor
pdb|1OGU|C Chain C, Structure Of Human Thr160-phospho Cdk2/cyclin A Complexed
With A
2-arylamino-4-cyclohexylmethyl-5-nitroso-6-
aminopyrimidine Inhibitor
pdb|1OI9|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OI9|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIU|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIU|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIY|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIY|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
Length = 302
Score = 55.8 bits (133), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 51/201 (25%), Positives = 95/201 (47%), Gaps = 31/201 (15%)
Query: 91 FSDANKLGEGGFGPVYKGVLK-KGDEIAVKRL------PGRSGQGLREMKNEASVIAKVQ 143
F K+GEG +G VYK K G+ +A+K++ G +RE+ S++ ++
Sbjct: 8 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREI----SLLKELN 63
Query: 144 HKNLVRLLGCCIDKDEKILIYEYM----------------PNKSLDFFLFDPTKRMLLDW 187
H N+V+LL +++ L++E++ P + +LF + +
Sbjct: 64 HPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCH 123
Query: 188 SANYSSR-LKVSNILLDKDINPKISDFGMARICGGNELQANTSRIVGTYGYMSPEYAIQ- 245
S R LK N+L++ + K++DFG+AR G ++ +V T Y +PE +
Sbjct: 124 SHRVLHRDLKPQNLLINTEGAIKLADFGLAR-AFGVPVRTYXHEVV-TLWYRAPEILLGC 181
Query: 246 GIFSIKSDVFSFGVLLLEIVS 266
+S D++S G + E+V+
Sbjct: 182 KYYSTAVDIWSLGCIFAEMVT 202
>pdb|2X8E|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2YER|A Chain A, Synthesis And Evaluation Of Triazolones As Checkpoint
Kinase 1 Inhibitors
pdb|2YEX|A Chain A, Synthesis And Evaluation Of Triazolones As Checkpoint
Kinase 1 Inhibitors
pdb|2YDK|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 276
Score = 55.8 bits (133), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 51/191 (26%), Positives = 89/191 (46%), Gaps = 19/191 (9%)
Query: 97 LGEGGFGPVYKGVLKKGDE-IAVKRLPGRSGQGLRE-MKNEASVIAKVQHKNLVRLLGCC 154
LGEG +G V V + +E +AVK + + E +K E + + H+N+V+ G
Sbjct: 15 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHR 74
Query: 155 IDKDEKILIYEY---------------MPNKSLDFFLFDPTKRMLLDWSANYSSR-LKVS 198
+ + + L EY MP F ++ + R +K
Sbjct: 75 REGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIGITHRDIKPE 134
Query: 199 NILLDKDINPKISDFGMARICGGNELQANTSRIVGTYGYMSPEYAIQGIFSIKS-DVFSF 257
N+LLD+ N KISDFG+A + N + +++ GT Y++PE + F + DV+S
Sbjct: 135 NLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSC 194
Query: 258 GVLLLEIVSGK 268
G++L +++G+
Sbjct: 195 GIVLTAMLAGE 205
>pdb|4FT3|A Chain A, Crystal Structure Of The Chk1
pdb|4GH2|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 55.8 bits (133), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 51/191 (26%), Positives = 89/191 (46%), Gaps = 19/191 (9%)
Query: 97 LGEGGFGPVYKGVLKKGDE-IAVKRLPGRSGQGLRE-MKNEASVIAKVQHKNLVRLLGCC 154
LGEG +G V V + +E +AVK + + E +K E + + H+N+V+ G
Sbjct: 14 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHR 73
Query: 155 IDKDEKILIYEY---------------MPNKSLDFFLFDPTKRMLLDWSANYSSR-LKVS 198
+ + + L EY MP F ++ + R +K
Sbjct: 74 REGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIGITHRDIKPE 133
Query: 199 NILLDKDINPKISDFGMARICGGNELQANTSRIVGTYGYMSPEYAIQGIFSIKS-DVFSF 257
N+LLD+ N KISDFG+A + N + +++ GT Y++PE + F + DV+S
Sbjct: 134 NLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGTLPYVAPELLKRREFHAEPVDVWSC 193
Query: 258 GVLLLEIVSGK 268
G++L +++G+
Sbjct: 194 GIVLTAMLAGE 204
>pdb|4FSZ|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 55.8 bits (133), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 51/191 (26%), Positives = 89/191 (46%), Gaps = 19/191 (9%)
Query: 97 LGEGGFGPVYKGVLKKGDE-IAVKRLPGRSGQGLRE-MKNEASVIAKVQHKNLVRLLGCC 154
LGEG +G V V + +E +AVK + + E +K E + + H+N+V+ G
Sbjct: 14 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEIXINKMLNHENVVKFYGHR 73
Query: 155 IDKDEKILIYEY---------------MPNKSLDFFLFDPTKRMLLDWSANYSSR-LKVS 198
+ + + L EY MP F ++ + R +K
Sbjct: 74 REGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIGITHRDIKPE 133
Query: 199 NILLDKDINPKISDFGMARICGGNELQANTSRIVGTYGYMSPEYAIQGIFSIKS-DVFSF 257
N+LLD+ N KISDFG+A + N + +++ GT Y++PE + F + DV+S
Sbjct: 134 NLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGTLPYVAPELLKRREFHAEPVDVWSC 193
Query: 258 GVLLLEIVSGK 268
G++L +++G+
Sbjct: 194 GIVLTAMLAGE 204
>pdb|2J90|A Chain A, Crystal Structure Of Human Zip Kinase In Complex With A
Tetracyclic Pyridone Inhibitor (pyridone 6)
pdb|2J90|B Chain B, Crystal Structure Of Human Zip Kinase In Complex With A
Tetracyclic Pyridone Inhibitor (pyridone 6)
Length = 304
Score = 55.8 bits (133), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 61/211 (28%), Positives = 99/211 (46%), Gaps = 32/211 (15%)
Query: 85 STATNKFSDANKLGEGGFGPVYKGVLK-KGDEIAVK-----RL-PGRSGQGLREMKNEAS 137
S + + +LG G F V K K G E A K RL R G E++ E +
Sbjct: 22 SMVEDHYEMGEELGSGQFAIVRKCRQKGTGKEYAAKFIKKRRLXSSRRGVSREEIEREVN 81
Query: 138 VIAKVQHKNLVRLLGCCIDKDEKILIYEYMPNKSLDFFLFDPTK----------RMLLDW 187
++ +++H N++ L +K + +LI E + L FL + + +LD
Sbjct: 82 ILREIRHPNIITLHDIFENKTDVVLILELVSGGELFDFLAEKESLTEDEATQFLKQILDG 141
Query: 188 SANYSSR------LKVSNI-LLDKDI-NPKIS--DFGMA-RICGGNELQANTSRIVGTYG 236
S+ LK NI LLDK++ NP+I DFG+A +I GNE + I GT
Sbjct: 142 VHYLHSKRIAHFDLKPENIMLLDKNVPNPRIKLIDFGIAHKIEAGNEFK----NIFGTPE 197
Query: 237 YMSPEYAIQGIFSIKSDVFSFGVLLLEIVSG 267
+++PE +++D++S GV+ ++SG
Sbjct: 198 FVAPEIVNYEPLGLEADMWSIGVITYILLSG 228
>pdb|1H4L|A Chain A, Structure And Regulation Of The Cdk5-P25(Nck5a) Complex
pdb|1H4L|B Chain B, Structure And Regulation Of The Cdk5-P25(Nck5a) Complex
Length = 292
Score = 55.8 bits (133), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 55/205 (26%), Positives = 97/205 (47%), Gaps = 30/205 (14%)
Query: 89 NKFSDANKLGEGGFGPVYKGVLKKGDEI-AVKRL------PGRSGQGLREMKNEASVIAK 141
K+ K+GEG +G V+K ++ EI A+KR+ G LRE+ ++ +
Sbjct: 2 QKYEKLEKIGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREI----CLLKE 57
Query: 142 VQHKNLVRLLGCCIDKDEKILIYEYMP----------NKSLD-----FFLFDPTKRMLLD 186
++HKN+VRL + L++E+ N LD FLF K +
Sbjct: 58 LKHKNIVRLHDVLHSDKKLTLVFEFCDQDLKKYFDSCNGDLDPEIVKSFLFQLLKGLGFC 117
Query: 187 WSANYSSR-LKVSNILLDKDINPKISDFGMARICGGNELQANTSRIVGTYGYMSPEYAIQ 245
S N R LK N+L++++ K++DFG+AR G ++ ++ +V T Y P+
Sbjct: 118 HSRNVLHRDLKPQNLLINRNGELKLADFGLAR-AFGIPVRCYSAEVV-TLWYRPPDVLFG 175
Query: 246 G-IFSIKSDVFSFGVLLLEIVSGKK 269
++S D++S G + E+ + +
Sbjct: 176 AKLYSTSIDMWSAGCIFAELANAAR 200
>pdb|4FSW|A Chain A, Crystal Structure Of The Chk1
pdb|4FTA|A Chain A, Crystal Structure Of The Chk1
pdb|4FTC|A Chain A, Crystal Structure Of The Chk1
pdb|4FTN|A Chain A, Crystal Structure Of The Chk1
pdb|4FTQ|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 55.8 bits (133), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 51/191 (26%), Positives = 89/191 (46%), Gaps = 19/191 (9%)
Query: 97 LGEGGFGPVYKGVLKKGDE-IAVKRLPGRSGQGLRE-MKNEASVIAKVQHKNLVRLLGCC 154
LGEG +G V V + +E +AVK + + E +K E + + H+N+V+ G
Sbjct: 14 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHR 73
Query: 155 IDKDEKILIYEY---------------MPNKSLDFFLFDPTKRMLLDWSANYSSR-LKVS 198
+ + + L EY MP F ++ + R +K
Sbjct: 74 REGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIGITHRDIKPE 133
Query: 199 NILLDKDINPKISDFGMARICGGNELQANTSRIVGTYGYMSPEYAIQGIFSIKS-DVFSF 257
N+LLD+ N KISDFG+A + N + +++ GT Y++PE + F + DV+S
Sbjct: 134 NLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGTLPYVAPELLKRREFHAEPVDVWSC 193
Query: 258 GVLLLEIVSGK 268
G++L +++G+
Sbjct: 194 GIVLTAMLAGE 204
>pdb|3RWP|A Chain A, Discovery Of A Novel, Potent And Selective Inhibitor Of 3-
Phosphoinositide Dependent Kinase (Pdk1)
Length = 311
Score = 55.8 bits (133), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 54/199 (27%), Positives = 85/199 (42%), Gaps = 24/199 (12%)
Query: 91 FSDANKLGEGGFGPVYKG-VLKKGDEIAVKRLPGRSGQGLREMK-----NEASVIAKVQH 144
F LGEG F V L E A+K L R ++E K E V++++ H
Sbjct: 34 FKFGKILGEGSFSTVVLARELATSREYAIKILEKR--HIIKENKVPYVTRERDVMSRLDH 91
Query: 145 KNLVRLLGCCIDKDEKILIYEYMPNKSLDFFL-----FDPTKRML-----------LDWS 188
V+L D ++ Y N L ++ FD T L
Sbjct: 92 PFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGK 151
Query: 189 ANYSSRLKVSNILLDKDINPKISDFGMARICGGNELQANTSRIVGTYGYMSPEYAIQGIF 248
LK NILL++D++ +I+DFG A++ QA + VGT Y+SPE +
Sbjct: 152 GIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSA 211
Query: 249 SIKSDVFSFGVLLLEIVSG 267
SD+++ G ++ ++V+G
Sbjct: 212 CKSSDLWALGCIIYQLVAG 230
>pdb|3JVR|A Chain A, Characterization Of The Chk1 Allosteric Inhibitor Binding
Site
pdb|3JVS|A Chain A, Characterization Of The Chk1 Allosteric Inhibitor Binding
Site
Length = 271
Score = 55.8 bits (133), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 51/191 (26%), Positives = 89/191 (46%), Gaps = 19/191 (9%)
Query: 97 LGEGGFGPVYKGVLKKGDE-IAVKRLPGRSGQGLRE-MKNEASVIAKVQHKNLVRLLGCC 154
LGEG +G V V + +E +AVK + + E +K E + + H+N+V+ G
Sbjct: 14 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHR 73
Query: 155 IDKDEKILIYEY---------------MPNKSLDFFLFDPTKRMLLDWSANYSSR-LKVS 198
+ + + L EY MP F ++ + R +K
Sbjct: 74 REGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIGITHRDIKPE 133
Query: 199 NILLDKDINPKISDFGMARICGGNELQANTSRIVGTYGYMSPEYAIQGIFSIKS-DVFSF 257
N+LLD+ N KISDFG+A + N + +++ GT Y++PE + F + DV+S
Sbjct: 134 NLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSC 193
Query: 258 GVLLLEIVSGK 268
G++L +++G+
Sbjct: 194 GIVLTAMLAGE 204
>pdb|1UU9|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-3
Length = 286
Score = 55.8 bits (133), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 54/199 (27%), Positives = 85/199 (42%), Gaps = 24/199 (12%)
Query: 91 FSDANKLGEGGFGPVYKG-VLKKGDEIAVKRLPGRSGQGLREMK-----NEASVIAKVQH 144
F LGEG F V L E A+K L R ++E K E V++++ H
Sbjct: 11 FKFGKILGEGSFSTVVLARELATSREYAIKILEKR--HIIKENKVPYVTRERDVMSRLDH 68
Query: 145 KNLVRLLGCCIDKDEKILIYEYMPNKSLDFFL-----FDPTKRML-----------LDWS 188
V+L D ++ Y N L ++ FD T L
Sbjct: 69 PFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGK 128
Query: 189 ANYSSRLKVSNILLDKDINPKISDFGMARICGGNELQANTSRIVGTYGYMSPEYAIQGIF 248
LK NILL++D++ +I+DFG A++ QA + VGT Y+SPE +
Sbjct: 129 GIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSA 188
Query: 249 SIKSDVFSFGVLLLEIVSG 267
SD+++ G ++ ++V+G
Sbjct: 189 CKSSDLWALGCIIYQLVAG 207
>pdb|3NUS|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment8
pdb|3NUU|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment11
pdb|3NUY|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment17
Length = 286
Score = 55.8 bits (133), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 54/199 (27%), Positives = 85/199 (42%), Gaps = 24/199 (12%)
Query: 91 FSDANKLGEGGFGPVYKG-VLKKGDEIAVKRLPGRSGQGLREMK-----NEASVIAKVQH 144
F LGEG F V L E A+K L R ++E K E V++++ H
Sbjct: 10 FKFGKILGEGSFSTVVLARELATSREYAIKILEKR--HIIKENKVPYVTRERDVMSRLDH 67
Query: 145 KNLVRLLGCCIDKDEKILIYEYMPNKSLDFFL-----FDPTKRML-----------LDWS 188
V+L D ++ Y N L ++ FD T L
Sbjct: 68 PFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGK 127
Query: 189 ANYSSRLKVSNILLDKDINPKISDFGMARICGGNELQANTSRIVGTYGYMSPEYAIQGIF 248
LK NILL++D++ +I+DFG A++ QA + VGT Y+SPE +
Sbjct: 128 GIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSA 187
Query: 249 SIKSDVFSFGVLLLEIVSG 267
SD+++ G ++ ++V+G
Sbjct: 188 CKSSDLWALGCIIYQLVAG 206
>pdb|1H1P|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu2058
pdb|1H1P|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu2058
pdb|1H1Q|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6094
pdb|1H1Q|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6094
pdb|1H1R|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6086
pdb|1H1R|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6086
pdb|1H1S|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6102
pdb|1H1S|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6102
pdb|1H24|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH A 9 RESIDUE RECRUITMENT
Peptide From E2f
pdb|1H24|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH A 9 RESIDUE RECRUITMENT
Peptide From E2f
pdb|1H25|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From Retinoblastoma-Associated Protein
pdb|1H25|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From Retinoblastoma-Associated Protein
pdb|1H26|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P53
pdb|1H26|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P53
pdb|1H27|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P27
pdb|1H27|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P27
pdb|1H28|A Chain A, Cdk2/cyclin A In Complex With An 11-residue Recruitment
Peptide From P107
pdb|1H28|C Chain C, Cdk2/cyclin A In Complex With An 11-residue Recruitment
Peptide From P107
pdb|2WMA|A Chain A, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMA|C Chain C, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMB|A Chain A, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMB|C Chain C, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
Length = 303
Score = 55.8 bits (133), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 51/201 (25%), Positives = 95/201 (47%), Gaps = 31/201 (15%)
Query: 91 FSDANKLGEGGFGPVYKGVLK-KGDEIAVKRL------PGRSGQGLREMKNEASVIAKVQ 143
F K+GEG +G VYK K G+ +A+K++ G +RE+ S++ ++
Sbjct: 9 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREI----SLLKELN 64
Query: 144 HKNLVRLLGCCIDKDEKILIYEYM----------------PNKSLDFFLFDPTKRMLLDW 187
H N+V+LL +++ L++E++ P + +LF + +
Sbjct: 65 HPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCH 124
Query: 188 SANYSSR-LKVSNILLDKDINPKISDFGMARICGGNELQANTSRIVGTYGYMSPEYAIQ- 245
S R LK N+L++ + K++DFG+AR G ++ +V T Y +PE +
Sbjct: 125 SHRVLHRDLKPQNLLINTEGAIKLADFGLAR-AFGVPVRTYXHEVV-TLWYRAPEILLGC 182
Query: 246 GIFSIKSDVFSFGVLLLEIVS 266
+S D++S G + E+V+
Sbjct: 183 KYYSTAVDIWSLGCIFAEMVT 203
>pdb|2X4F|A Chain A, The Crystal Structure Of The Human Myosin Light Chain
Kinase Loc340156.
pdb|2X4F|B Chain B, The Crystal Structure Of The Human Myosin Light Chain
Kinase Loc340156
Length = 373
Score = 55.8 bits (133), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 67/230 (29%), Positives = 105/230 (45%), Gaps = 34/230 (14%)
Query: 87 ATNKFSDANK---LGEGGFGPVYK-GVLKKGDEIAVKRLPGRSGQGLREMKNEASVIAKV 142
A N F +K LG G FG V+K G ++A K + R + E+KNE SV+ ++
Sbjct: 84 AVNSFYTVSKTEILGGGRFGQVHKCEETATGLKLAAKIIKTRGMKDKEEVKNEISVMNQL 143
Query: 143 QHKNLVRLLGCCIDKDEKILIYEYMPN--------------KSLDFFLF-----DPTKRM 183
H NL++L K++ +L+ EY+ LD LF + + M
Sbjct: 144 DHANLIQLYDAFESKNDIVLVMEYVDGGELFDRIIDESYNLTELDTILFMKQICEGIRHM 203
Query: 184 LLDWSANYSSRLKVSNIL-LDKDINP-KISDFGMARICGGNE-LQANTSRIVGTYGYMSP 240
+ + LK NIL +++D KI DFG+AR E L+ N GT +++P
Sbjct: 204 HQMYILHLD--LKPENILCVNRDAKQIKIIDFGLARRYKPREKLKVN----FGTPEFLAP 257
Query: 241 EYAIQGIFSIKSDVFSFGVLLLEIVSG-KKTTGFYRTDSL-TLLGYAWDL 288
E S +D++S GV+ ++SG G ++L +L WDL
Sbjct: 258 EVVNYDFVSFPTDMWSVGVIAYMLLSGLSPFLGDNDAETLNNILACRWDL 307
>pdb|1UU3|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Ly333531
pdb|1UU7|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-2
pdb|1UU8|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-1
pdb|1OKY|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Staurosporine
pdb|1OKZ|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Ucn-01
Length = 310
Score = 55.8 bits (133), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 54/199 (27%), Positives = 85/199 (42%), Gaps = 24/199 (12%)
Query: 91 FSDANKLGEGGFGPVYKG-VLKKGDEIAVKRLPGRSGQGLREMK-----NEASVIAKVQH 144
F LGEG F V L E A+K L R ++E K E V++++ H
Sbjct: 32 FKFGKILGEGSFSTVVLARELATSREYAIKILEKR--HIIKENKVPYVTRERDVMSRLDH 89
Query: 145 KNLVRLLGCCIDKDEKILIYEYMPNKSLDFFL-----FDPTKRML-----------LDWS 188
V+L D ++ Y N L ++ FD T L
Sbjct: 90 PFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGK 149
Query: 189 ANYSSRLKVSNILLDKDINPKISDFGMARICGGNELQANTSRIVGTYGYMSPEYAIQGIF 248
LK NILL++D++ +I+DFG A++ QA + VGT Y+SPE +
Sbjct: 150 GIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSA 209
Query: 249 SIKSDVFSFGVLLLEIVSG 267
SD+++ G ++ ++V+G
Sbjct: 210 CKSSDLWALGCIIYQLVAG 228
>pdb|1H1W|A Chain A, High Resolution Crystal Structure Of The Human Pdk1
Catalytic Domain
pdb|1UVR|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-8
Length = 289
Score = 55.8 bits (133), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 54/199 (27%), Positives = 85/199 (42%), Gaps = 24/199 (12%)
Query: 91 FSDANKLGEGGFGPVYKG-VLKKGDEIAVKRLPGRSGQGLREMK-----NEASVIAKVQH 144
F LGEG F V L E A+K L R ++E K E V++++ H
Sbjct: 12 FKFGKILGEGSFSTVVLARELATSREYAIKILEKR--HIIKENKVPYVTRERDVMSRLDH 69
Query: 145 KNLVRLLGCCIDKDEKILIYEYMPNKSLDFFL-----FDPTKRML-----------LDWS 188
V+L D ++ Y N L ++ FD T L
Sbjct: 70 PFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGK 129
Query: 189 ANYSSRLKVSNILLDKDINPKISDFGMARICGGNELQANTSRIVGTYGYMSPEYAIQGIF 248
LK NILL++D++ +I+DFG A++ QA + VGT Y+SPE +
Sbjct: 130 GIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSA 189
Query: 249 SIKSDVFSFGVLLLEIVSG 267
SD+++ G ++ ++V+G
Sbjct: 190 CKSSDLWALGCIIYQLVAG 208
>pdb|2OH4|A Chain A, Crystal Structure Of Vegfr2 With A Benzimidazole-Urea
Inhibitor
Length = 316
Score = 55.8 bits (133), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 64/241 (26%), Positives = 96/241 (39%), Gaps = 48/241 (19%)
Query: 74 DQLPL--------FSFSSVSTATNKFSDANKLGEGGFGPVYK----GVLKKGD--EIAVK 119
D+LPL + S ++ + LG G FG V + G+ K +AVK
Sbjct: 5 DELPLDEHCERLPYDASKWEFPRDRLNLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVK 64
Query: 120 RL-PGRSGQGLREMKNEASVIAKV-QHKNLVRLLGCCIDKDEKILIY------------- 164
L G + R + +E ++ + H N+V LLG C +++
Sbjct: 65 MLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYL 124
Query: 165 -----EYMPNKS-------------LDFFLFDPTKRMLLDWSANYSSR-LKVSNILLDKD 205
E++P K+ L + F K M S R L NILL +
Sbjct: 125 RSKRNEFVPYKTPEDLYKDFLTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLSEK 184
Query: 206 INPKISDFGMARICGGNELQANTSRIVGTYGYMSPEYAIQGIFSIKSDVFSFGVLLLEIV 265
KI DFG+AR + +M+PE +++I+SDV+SFGVLL EI
Sbjct: 185 NVVKICDFGLARDIXKDPDXVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIF 244
Query: 266 S 266
S
Sbjct: 245 S 245
>pdb|2R0U|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 54
pdb|2QHM|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 2a
pdb|2QHN|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 1a
pdb|3TKH|A Chain A, Crystal Structure Of Chk1 In Complex With Inhibitor S01
pdb|3TKI|A Chain A, Crystal Structure Of Chk1 In Complex With Inhibitor S25
Length = 323
Score = 55.8 bits (133), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 51/191 (26%), Positives = 89/191 (46%), Gaps = 19/191 (9%)
Query: 97 LGEGGFGPVYKGVLKKGDE-IAVKRLPGRSGQGLRE-MKNEASVIAKVQHKNLVRLLGCC 154
LGEG +G V V + +E +AVK + + E +K E + + H+N+V+ G
Sbjct: 15 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHR 74
Query: 155 IDKDEKILIYEY---------------MPNKSLDFFLFDPTKRMLLDWSANYSSR-LKVS 198
+ + + L EY MP F ++ + R +K
Sbjct: 75 REGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIGITHRDIKPE 134
Query: 199 NILLDKDINPKISDFGMARICGGNELQANTSRIVGTYGYMSPEYAIQGIFSIKS-DVFSF 257
N+LLD+ N KISDFG+A + N + +++ GT Y++PE + F + DV+S
Sbjct: 135 NLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSC 194
Query: 258 GVLLLEIVSGK 268
G++L +++G+
Sbjct: 195 GIVLTAMLAGE 205
>pdb|2BR1|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRB|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRG|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRH|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRM|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRN|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRO|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2C3J|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2C3K|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2C3L|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2CGU|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGV|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGW|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGX|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|3NLB|A Chain A, Novel Kinase Profile Highlights The Temporal Basis Of
Context Dependent Checkpoint Pathways To Cell Death
Length = 297
Score = 55.8 bits (133), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 51/191 (26%), Positives = 89/191 (46%), Gaps = 19/191 (9%)
Query: 97 LGEGGFGPVYKGVLKKGDE-IAVKRLPGRSGQGLRE-MKNEASVIAKVQHKNLVRLLGCC 154
LGEG +G V V + +E +AVK + + E +K E + + H+N+V+ G
Sbjct: 15 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHR 74
Query: 155 IDKDEKILIYEY---------------MPNKSLDFFLFDPTKRMLLDWSANYSSR-LKVS 198
+ + + L EY MP F ++ + R +K
Sbjct: 75 REGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIGITHRDIKPE 134
Query: 199 NILLDKDINPKISDFGMARICGGNELQANTSRIVGTYGYMSPEYAIQGIFSIKS-DVFSF 257
N+LLD+ N KISDFG+A + N + +++ GT Y++PE + F + DV+S
Sbjct: 135 NLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSC 194
Query: 258 GVLLLEIVSGK 268
G++L +++G+
Sbjct: 195 GIVLTAMLAGE 205
>pdb|1IA8|A Chain A, The 1.7 A Crystal Structure Of Human Cell Cycle Checkpoint
Kinase Chk1
pdb|1NVQ|A Chain A, The Complex Structure Of Checkpoint Kinase Chk1UCN-01
pdb|1NVR|A Chain A, The Complex Structure Of Checkpoint Kinase
Chk1STAUROSPORINE
pdb|1NVS|A Chain A, The Complex Structure Of Checkpoint Kinase Chk1SB218078
pdb|2WMQ|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMR|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMS|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMT|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMU|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMV|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMX|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMW|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XEY|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XF0|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XEZ|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2X8D|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2X8I|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2YM3|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM4|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM5|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM6|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM7|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM8|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YDI|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 289
Score = 55.8 bits (133), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 51/191 (26%), Positives = 89/191 (46%), Gaps = 19/191 (9%)
Query: 97 LGEGGFGPVYKGVLKKGDE-IAVKRLPGRSGQGLRE-MKNEASVIAKVQHKNLVRLLGCC 154
LGEG +G V V + +E +AVK + + E +K E + + H+N+V+ G
Sbjct: 15 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHR 74
Query: 155 IDKDEKILIYEY---------------MPNKSLDFFLFDPTKRMLLDWSANYSSR-LKVS 198
+ + + L EY MP F ++ + R +K
Sbjct: 75 REGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIGITHRDIKPE 134
Query: 199 NILLDKDINPKISDFGMARICGGNELQANTSRIVGTYGYMSPEYAIQGIFSIKS-DVFSF 257
N+LLD+ N KISDFG+A + N + +++ GT Y++PE + F + DV+S
Sbjct: 135 NLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSC 194
Query: 258 GVLLLEIVSGK 268
G++L +++G+
Sbjct: 195 GIVLTAMLAGE 205
>pdb|1ZLT|A Chain A, Crystal Structure Of Chk1 Complexed With A Hymenaldisine
Analog
pdb|2GDO|A Chain A, 4-(aminoalkylamino)-3-benzimidazole-quinolinones As Potent
Chk1 Inhibitors
Length = 295
Score = 55.8 bits (133), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 51/191 (26%), Positives = 89/191 (46%), Gaps = 19/191 (9%)
Query: 97 LGEGGFGPVYKGVLKKGDE-IAVKRLPGRSGQGLRE-MKNEASVIAKVQHKNLVRLLGCC 154
LGEG +G V V + +E +AVK + + E +K E + + H+N+V+ G
Sbjct: 15 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHR 74
Query: 155 IDKDEKILIYEY---------------MPNKSLDFFLFDPTKRMLLDWSANYSSR-LKVS 198
+ + + L EY MP F ++ + R +K
Sbjct: 75 REGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIGITHRDIKPE 134
Query: 199 NILLDKDINPKISDFGMARICGGNELQANTSRIVGTYGYMSPEYAIQGIFSIKS-DVFSF 257
N+LLD+ N KISDFG+A + N + +++ GT Y++PE + F + DV+S
Sbjct: 135 NLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSC 194
Query: 258 GVLLLEIVSGK 268
G++L +++G+
Sbjct: 195 GIVLTAMLAGE 205
>pdb|3C4F|A Chain A, Fgfr Tyrosine Kinase Domain In Complex With 3-(3-
Methoxybenzyl)-7-Azaindole
pdb|3C4F|B Chain B, Fgfr Tyrosine Kinase Domain In Complex With 3-(3-
Methoxybenzyl)-7-Azaindole
Length = 302
Score = 55.8 bits (133), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 55/212 (25%), Positives = 90/212 (42%), Gaps = 42/212 (19%)
Query: 97 LGEGGFGPVY--------KGVLKKGDEIAVKRLPGRSGQ-GLREMKNEASVIAKV-QHKN 146
LGEG FG V K + ++AVK L + + L ++ +E ++ + +HKN
Sbjct: 21 LGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKN 80
Query: 147 LVRLLGCCIDKDEKILIYEYMPNKSLDFFL-----------FDPTKRMLLDWSAN----- 190
++ LLG C +I EY +L +L ++P+ S+
Sbjct: 81 IINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYCYNPSHNPEEQLSSKDLVSC 140
Query: 191 ----------------YSSRLKVSNILLDKDINPKISDFGMARICGGNELQANTSRIVGT 234
L N+L+ +D KI+DFG+AR + T+
Sbjct: 141 AYQVARGMEYLASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKTTNGRLP 200
Query: 235 YGYMSPEYAIQGIFSIKSDVFSFGVLLLEIVS 266
+M+PE I++ +SDV+SFGVLL EI +
Sbjct: 201 VKWMAPEALFDRIYTHQSDVWSFGVLLWEIFT 232
>pdb|2HOG|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 20
pdb|2HXL|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 1
pdb|2HXQ|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 2
pdb|2HY0|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 22
pdb|3F9N|A Chain A, Crystal Structure Of Chk1 Kinase In Complex With Inhibitor
38
Length = 322
Score = 55.8 bits (133), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 51/191 (26%), Positives = 89/191 (46%), Gaps = 19/191 (9%)
Query: 97 LGEGGFGPVYKGVLKKGDE-IAVKRLPGRSGQGLRE-MKNEASVIAKVQHKNLVRLLGCC 154
LGEG +G V V + +E +AVK + + E +K E + + H+N+V+ G
Sbjct: 14 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHR 73
Query: 155 IDKDEKILIYEY---------------MPNKSLDFFLFDPTKRMLLDWSANYSSR-LKVS 198
+ + + L EY MP F ++ + R +K
Sbjct: 74 REGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIGITHRDIKPE 133
Query: 199 NILLDKDINPKISDFGMARICGGNELQANTSRIVGTYGYMSPEYAIQGIFSIKS-DVFSF 257
N+LLD+ N KISDFG+A + N + +++ GT Y++PE + F + DV+S
Sbjct: 134 NLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSC 193
Query: 258 GVLLLEIVSGK 268
G++L +++G+
Sbjct: 194 GIVLTAMLAGE 204
>pdb|3SC1|A Chain A, Novel Isoquinolone Pdk1 Inhibitors Discovered Through
Fragment-Based Lead Discovery
pdb|3RWQ|A Chain A, Discovery Of A Novel, Potent And Selective Inhibitor Of 3-
Phosphoinositide Dependent Kinase (Pdk1)
Length = 311
Score = 55.5 bits (132), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 54/199 (27%), Positives = 85/199 (42%), Gaps = 24/199 (12%)
Query: 91 FSDANKLGEGGFGPVYKG-VLKKGDEIAVKRLPGRSGQGLREMK-----NEASVIAKVQH 144
F LGEG F V L E A+K L R ++E K E V++++ H
Sbjct: 34 FKFGKILGEGSFSTVVLARELATSREYAIKILEKR--HIIKENKVPYVTRERDVMSRLDH 91
Query: 145 KNLVRLLGCCIDKDEKILIYEYMPNKSLDFFL-----FDPTKRML-----------LDWS 188
V+L D ++ Y N L ++ FD T L
Sbjct: 92 PFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGK 151
Query: 189 ANYSSRLKVSNILLDKDINPKISDFGMARICGGNELQANTSRIVGTYGYMSPEYAIQGIF 248
LK NILL++D++ +I+DFG A++ QA + VGT Y+SPE +
Sbjct: 152 GIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSA 211
Query: 249 SIKSDVFSFGVLLLEIVSG 267
SD+++ G ++ ++V+G
Sbjct: 212 CKSSDLWALGCIIYQLVAG 230
>pdb|2R7B|A Chain A, Crystal Structure Of The Phosphoinositide-Dependent
Kinase- 1 (Pdk-1)catalytic Domain Bound To A
Dibenzonaphthyridine Inhibitor
pdb|3ION|A Chain A, Pdk1 In Complex With Compound 8h
Length = 312
Score = 55.5 bits (132), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 54/199 (27%), Positives = 85/199 (42%), Gaps = 24/199 (12%)
Query: 91 FSDANKLGEGGFGPVYKG-VLKKGDEIAVKRLPGRSGQGLREMK-----NEASVIAKVQH 144
F LGEG F V L E A+K L R ++E K E V++++ H
Sbjct: 35 FKFGKILGEGSFSTVVLARELATSREYAIKILEKR--HIIKENKVPYVTRERDVMSRLDH 92
Query: 145 KNLVRLLGCCIDKDEKILIYEYMPNKSLDFFL-----FDPTKRML-----------LDWS 188
V+L D ++ Y N L ++ FD T L
Sbjct: 93 PFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGK 152
Query: 189 ANYSSRLKVSNILLDKDINPKISDFGMARICGGNELQANTSRIVGTYGYMSPEYAIQGIF 248
LK NILL++D++ +I+DFG A++ QA + VGT Y+SPE +
Sbjct: 153 GIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANSFVGTAQYVSPELLTEKSA 212
Query: 249 SIKSDVFSFGVLLLEIVSG 267
SD+++ G ++ ++V+G
Sbjct: 213 CKSSDLWALGCIIYQLVAG 231
>pdb|3NAX|A Chain A, Pdk1 In Complex With Inhibitor Mp7
Length = 311
Score = 55.5 bits (132), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 54/199 (27%), Positives = 85/199 (42%), Gaps = 24/199 (12%)
Query: 91 FSDANKLGEGGFGPVYKG-VLKKGDEIAVKRLPGRSGQGLREMK-----NEASVIAKVQH 144
F LGEG F V L E A+K L R ++E K E V++++ H
Sbjct: 31 FKFGKILGEGSFSTVVLARELATSREYAIKILEKR--HIIKENKVPYVTRERDVMSRLDH 88
Query: 145 KNLVRLLGCCIDKDEKILIYEYMPNKSLDFFL-----FDPTKRML-----------LDWS 188
V+L D ++ Y N L ++ FD T L
Sbjct: 89 PFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGK 148
Query: 189 ANYSSRLKVSNILLDKDINPKISDFGMARICGGNELQANTSRIVGTYGYMSPEYAIQGIF 248
LK NILL++D++ +I+DFG A++ QA + VGT Y+SPE +
Sbjct: 149 GIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANSFVGTAQYVSPELLTEKSA 208
Query: 249 SIKSDVFSFGVLLLEIVSG 267
SD+++ G ++ ++V+G
Sbjct: 209 CKSSDLWALGCIIYQLVAG 227
>pdb|1FOT|A Chain A, Structure Of The Unliganded Camp-Dependent Protein Kinase
Catalytic Subunit From Saccharomyces Cerevisiae
Length = 318
Score = 55.5 bits (132), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 57/218 (26%), Positives = 97/218 (44%), Gaps = 45/218 (20%)
Query: 91 FSDANKLGEGGFGPVY------------KGVLKKGDEIAVKRLPGRSGQGLREMKNEASV 138
F LG G FG V+ VLKK EI V+ + + +E +
Sbjct: 8 FQILRTLGTGSFGRVHLIRSRHNGRYYAMKVLKK--EIVVRL------KQVEHTNDERLM 59
Query: 139 IAKVQHKNLVRLLGCCIDKDEKILIYEYMPNKSLDFFLFDPTKRMLLDWSANYSSR---- 194
++ V H ++R+ G D + +I +Y+ L F L ++R + Y++
Sbjct: 60 LSIVTHPFIIRMWGTFQDAQQIFMIMDYIEGGEL-FSLLRKSQRFPNPVAKFYAAEVCLA 118
Query: 195 -------------LKVSNILLDKDINPKISDFGMARICGGNELQANTSRIVGTYGYMSPE 241
LK NILLDK+ + KI+DFG A+ + T + GT Y++PE
Sbjct: 119 LEYLHSKDIIYRDLKPENILLDKNGHIKITDFGFAKY-----VPDVTYXLCGTPDYIAPE 173
Query: 242 YAIQGIFSIKSDVFSFGVLLLEIVSGKKTTGFYRTDSL 279
++ D +SFG+L+ E+++G T FY ++++
Sbjct: 174 VVSTKPYNKSIDWWSFGILIYEMLAG--YTPFYDSNTM 209
>pdb|3NAY|A Chain A, Pdk1 In Complex With Inhibitor Mp6
pdb|3NAY|B Chain B, Pdk1 In Complex With Inhibitor Mp6
Length = 311
Score = 55.5 bits (132), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 54/199 (27%), Positives = 85/199 (42%), Gaps = 24/199 (12%)
Query: 91 FSDANKLGEGGFGPVYKG-VLKKGDEIAVKRLPGRSGQGLREMK-----NEASVIAKVQH 144
F LGEG F V L E A+K L R ++E K E V++++ H
Sbjct: 31 FKFGKILGEGSFSTVVLARELATSREYAIKILEKR--HIIKENKVPYVTRERDVMSRLDH 88
Query: 145 KNLVRLLGCCIDKDEKILIYEYMPNKSLDFFL-----FDPTKRML-----------LDWS 188
V+L D ++ Y N L ++ FD T L
Sbjct: 89 PFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGK 148
Query: 189 ANYSSRLKVSNILLDKDINPKISDFGMARICGGNELQANTSRIVGTYGYMSPEYAIQGIF 248
LK NILL++D++ +I+DFG A++ QA + VGT Y+SPE +
Sbjct: 149 GIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSA 208
Query: 249 SIKSDVFSFGVLLLEIVSG 267
SD+++ G ++ ++V+G
Sbjct: 209 CKSSDLWALGCIIYQLVAG 227
>pdb|2BIY|A Chain A, Structure Of Pdk1-S241a Mutant Kinase Domain
Length = 310
Score = 55.5 bits (132), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 54/199 (27%), Positives = 85/199 (42%), Gaps = 24/199 (12%)
Query: 91 FSDANKLGEGGFGPVYKG-VLKKGDEIAVKRLPGRSGQGLREMK-----NEASVIAKVQH 144
F LGEG F V L E A+K L R ++E K E V++++ H
Sbjct: 32 FKFGKILGEGSFSTVVLARELATSREYAIKILEKR--HIIKENKVPYVTRERDVMSRLDH 89
Query: 145 KNLVRLLGCCIDKDEKILIYEYMPNKSLDFFL-----FDPTKRML-----------LDWS 188
V+L D ++ Y N L ++ FD T L
Sbjct: 90 PFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGK 149
Query: 189 ANYSSRLKVSNILLDKDINPKISDFGMARICGGNELQANTSRIVGTYGYMSPEYAIQGIF 248
LK NILL++D++ +I+DFG A++ QA + VGT Y+SPE +
Sbjct: 150 GIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANAFVGTAQYVSPELLTEKSA 209
Query: 249 SIKSDVFSFGVLLLEIVSG 267
SD+++ G ++ ++V+G
Sbjct: 210 CKSSDLWALGCIIYQLVAG 228
>pdb|2XCH|A Chain A, Crystal Structure Of Pdk1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 309
Score = 55.5 bits (132), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 54/199 (27%), Positives = 85/199 (42%), Gaps = 24/199 (12%)
Query: 91 FSDANKLGEGGFGPVYKG-VLKKGDEIAVKRLPGRSGQGLREMK-----NEASVIAKVQH 144
F LGEG F V L E A+K L R ++E K E V++++ H
Sbjct: 32 FKFGKILGEGSFSTVVLARELATSREYAIKILEKR--HIIKENKVPYVTRERDVMSRLDH 89
Query: 145 KNLVRLLGCCIDKDEKILIYEYMPNKSLDFFL-----FDPTKRML-----------LDWS 188
V+L D ++ Y N L ++ FD T L
Sbjct: 90 PFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGK 149
Query: 189 ANYSSRLKVSNILLDKDINPKISDFGMARICGGNELQANTSRIVGTYGYMSPEYAIQGIF 248
LK NILL++D++ +I+DFG A++ QA + VGT Y+SPE +
Sbjct: 150 GIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSA 209
Query: 249 SIKSDVFSFGVLLLEIVSG 267
SD+++ G ++ ++V+G
Sbjct: 210 CKSSDLWALGCIIYQLVAG 228
>pdb|3IOP|A Chain A, Pdk-1 In Complex With The Inhibitor Compound-8i
pdb|3QCQ|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-(3-
Amino-1h-Indazol-6-Yl)-N4-Ethyl-2,4-Pyrimidinediamine
pdb|3QCS|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-[2-
Amino-6-(4-Morpholinyl)-4-Pyrimidinyl]-1h-Indazol-3-
Amine
pdb|3QCX|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-{2-
Amino-6-[(3r)-3-Methyl-4-Morpholinyl]-4-Pyrimidinyl}-1h-
Indazol-3- Amine
pdb|3QCY|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 4-[2-
Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-Pyrimidinyl]-N-
Phenyl-2- Morpholinecarboxamide
pdb|3QD0|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With (2r,5s)-
1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-Pyrimidinyl]-6-
Methyl-N- Phenyl-3-Piperidinecarboxamide
pdb|3QD3|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 1,1- Dimethylethyl
{(3r,6s)-1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-
Pyrimidinyl]-6-Methyl-3-Piperidinyl}carbamate
pdb|3QD4|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 1,1-
Dimethylethyl{(3r,
5r)-1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-
Pyrimidinyl]-5-Methyl-3-Piperidinyl}carbamate
Length = 312
Score = 55.5 bits (132), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 54/199 (27%), Positives = 85/199 (42%), Gaps = 24/199 (12%)
Query: 91 FSDANKLGEGGFGPVYKG-VLKKGDEIAVKRLPGRSGQGLREMK-----NEASVIAKVQH 144
F LGEG F V L E A+K L R ++E K E V++++ H
Sbjct: 35 FKFGKILGEGSFSTVVLARELATSREYAIKILEKR--HIIKENKVPYVTRERDVMSRLDH 92
Query: 145 KNLVRLLGCCIDKDEKILIYEYMPNKSLDFFL-----FDPTKRML-----------LDWS 188
V+L D ++ Y N L ++ FD T L
Sbjct: 93 PFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGK 152
Query: 189 ANYSSRLKVSNILLDKDINPKISDFGMARICGGNELQANTSRIVGTYGYMSPEYAIQGIF 248
LK NILL++D++ +I+DFG A++ QA + VGT Y+SPE +
Sbjct: 153 GIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSA 212
Query: 249 SIKSDVFSFGVLLLEIVSG 267
SD+++ G ++ ++V+G
Sbjct: 213 CKSSDLWALGCIIYQLVAG 231
>pdb|2W96|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 55.5 bits (132), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 58/211 (27%), Positives = 101/211 (47%), Gaps = 33/211 (15%)
Query: 87 ATNKFSDANKLGEGGFGPVYKGV-LKKGDEIAVK--RLP-GRSGQGLREMKNEASV--IA 140
AT+++ ++G G +G VYK G +A+K R+P G G + ++ A + +
Sbjct: 2 ATSRYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGEEGLPISTVREVALLRRLE 61
Query: 141 KVQHKNLVRLLGCC----IDKDEKI-LIYEYMPNKSLDFFL-------------FDPTKR 182
+H N+VRL+ C D++ K+ L++E++ ++ L +L D ++
Sbjct: 62 AFEHPNVVRLMDVCATSRTDREIKVTLVFEHV-DQDLRTYLDKAPPPGLPAETIKDLMRQ 120
Query: 183 ML--LDW-SAN--YSSRLKVSNILLDKDINPKISDFGMARICGGNELQANTSRIVGTYGY 237
L LD+ AN LK NIL+ K++DFG+ARI Q +V T Y
Sbjct: 121 FLRGLDFLHANCIVHRDLKPENILVTSGGTVKLADFGLARIYS---YQMALDPVVVTLWY 177
Query: 238 MSPEYAIQGIFSIKSDVFSFGVLLLEIVSGK 268
+PE +Q ++ D++S G + E+ K
Sbjct: 178 RAPEVLLQSTYATPVDMWSVGCIFAEMFRRK 208
>pdb|3NUN|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Lead
Compound
Length = 292
Score = 55.5 bits (132), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 54/199 (27%), Positives = 85/199 (42%), Gaps = 24/199 (12%)
Query: 91 FSDANKLGEGGFGPVYKG-VLKKGDEIAVKRLPGRSGQGLREMK-----NEASVIAKVQH 144
F LGEG F V L E A+K L R ++E K E V++++ H
Sbjct: 16 FKFGKILGEGSFSTVVLARELATSREYAIKILEKR--HIIKENKVPYVTRERDVMSRLDH 73
Query: 145 KNLVRLLGCCIDKDEKILIYEYMPNKSLDFFL-----FDPTKRML-----------LDWS 188
V+L D ++ Y N L ++ FD T L
Sbjct: 74 PFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGK 133
Query: 189 ANYSSRLKVSNILLDKDINPKISDFGMARICGGNELQANTSRIVGTYGYMSPEYAIQGIF 248
LK NILL++D++ +I+DFG A++ QA + VGT Y+SPE +
Sbjct: 134 GIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSA 193
Query: 249 SIKSDVFSFGVLLLEIVSG 267
SD+++ G ++ ++V+G
Sbjct: 194 CKSSDLWALGCIIYQLVAG 212
>pdb|3B2T|A Chain A, Structure Of Phosphotransferase
pdb|3B2T|B Chain B, Structure Of Phosphotransferase
Length = 311
Score = 55.5 bits (132), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 57/220 (25%), Positives = 95/220 (43%), Gaps = 42/220 (19%)
Query: 89 NKFSDANKLGEGGFGPVY--------KGVLKKGDEIAVKRLPGRSGQ-GLREMKNEASVI 139
+K + LGEG FG V K K+ +AVK L + + L ++ +E ++
Sbjct: 22 DKLTLGKPLGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMM 81
Query: 140 AKV-QHKNLVRLLGCCIDKDEKILIYEYMPNKSLDFFL-----------FD----PTKRM 183
+ +HKN++ LLG C +I EY +L +L +D P ++M
Sbjct: 82 KMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQM 141
Query: 184 LLD--WSANYS---------------SRLKVSNILLDKDINPKISDFGMARICGGNELQA 226
S Y L N+L+ ++ KI+DFG+AR +
Sbjct: 142 TFKDLVSCTYQLARGMEYLASQKCIHRDLTARNVLVTENNVMKIADFGLARDINNIDYYK 201
Query: 227 NTSRIVGTYGYMSPEYAIQGIFSIKSDVFSFGVLLLEIVS 266
T+ +M+PE +++ +SDV+SFGVL+ EI +
Sbjct: 202 KTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 241
>pdb|1GJO|A Chain A, The Fgfr2 Tyrosine Kinase Domain
pdb|1OEC|A Chain A, Fgfr2 Kinase Domain
Length = 316
Score = 55.5 bits (132), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 57/220 (25%), Positives = 95/220 (43%), Gaps = 42/220 (19%)
Query: 89 NKFSDANKLGEGGFGPVY--------KGVLKKGDEIAVKRLPGRSGQ-GLREMKNEASVI 139
+K + LGEG FG V K K+ +AVK L + + L ++ +E ++
Sbjct: 27 DKLTLGKPLGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMM 86
Query: 140 AKV-QHKNLVRLLGCCIDKDEKILIYEYMPNKSLDFFL-----------FD----PTKRM 183
+ +HKN++ LLG C +I EY +L +L +D P ++M
Sbjct: 87 KMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQM 146
Query: 184 LLD--WSANYS---------------SRLKVSNILLDKDINPKISDFGMARICGGNELQA 226
S Y L N+L+ ++ KI+DFG+AR +
Sbjct: 147 TFKDLVSCTYQLARGMEYLASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYK 206
Query: 227 NTSRIVGTYGYMSPEYAIQGIFSIKSDVFSFGVLLLEIVS 266
T+ +M+PE +++ +SDV+SFGVL+ EI +
Sbjct: 207 KTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 246
>pdb|2PZR|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K641r Mutation Responsible For
Pfeiffer Syndrome
pdb|2PZR|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K641r Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 55.5 bits (132), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 56/220 (25%), Positives = 95/220 (43%), Gaps = 42/220 (19%)
Query: 89 NKFSDANKLGEGGFGPVY--------KGVLKKGDEIAVKRLPGRSGQ-GLREMKNEASVI 139
+K + LGEG FG V K K+ +AVK L + + L ++ +E ++
Sbjct: 35 DKLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMM 94
Query: 140 AKV-QHKNLVRLLGCCIDKDEKILIYEYMPNKSLDFFL-----------FD----PTKRM 183
+ +HKN++ LLG C +I EY +L +L +D P ++M
Sbjct: 95 KMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQM 154
Query: 184 LLD--WSANYS---------------SRLKVSNILLDKDINPKISDFGMARICGGNELQA 226
S Y L N+L+ ++ +I+DFG+AR +
Sbjct: 155 TFKDLVSCTYQLARGMEYLASQKCIHRDLAARNVLVTENNVMRIADFGLARDINNIDYYK 214
Query: 227 NTSRIVGTYGYMSPEYAIQGIFSIKSDVFSFGVLLLEIVS 266
T+ +M+PE +++ +SDV+SFGVL+ EI +
Sbjct: 215 KTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 254
>pdb|3GQL|A Chain A, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
pdb|3GQL|B Chain B, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
pdb|3GQL|C Chain C, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
Length = 326
Score = 55.5 bits (132), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 55/212 (25%), Positives = 90/212 (42%), Gaps = 42/212 (19%)
Query: 97 LGEGGFGPVY--------KGVLKKGDEIAVKRLPGRSGQ-GLREMKNEASVIAKV-QHKN 146
LGEG FG V K + ++AVK L + + L ++ +E ++ + +HKN
Sbjct: 36 LGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKN 95
Query: 147 LVRLLGCCIDKDEKILIYEYMPNKSLDFFL-----------FDPTKRMLLDWSAN----- 190
++ LLG C +I EY +L +L ++P+ S+
Sbjct: 96 IINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYCYNPSHNPEEQLSSKDLVSC 155
Query: 191 ----------------YSSRLKVSNILLDKDINPKISDFGMARICGGNELQANTSRIVGT 234
L N+L+ +D KI+DFG+AR + T+
Sbjct: 156 AYQVARGMEYLASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKTTNGRLP 215
Query: 235 YGYMSPEYAIQGIFSIKSDVFSFGVLLLEIVS 266
+M+PE I++ +SDV+SFGVLL EI +
Sbjct: 216 VKWMAPEALFDRIYTHQSDVWSFGVLLWEIFT 247
>pdb|3HRC|A Chain A, Crystal Structure Of A Mutant Of Human Pdk1 Kinase Domain
In Complex With Atp
pdb|3HRF|A Chain A, Crystal Structure Of Human Pdk1 Kinase Domain In Complex
With An Allosteric Activator Bound To The Pif-Pocket
pdb|3RCJ|A Chain A, Rapid Preparation Of Triazolyl Substituted Nh-Heterocyclic
Kinase Inhibitors Via One-Pot Sonogashira Coupling
Tms-Deprotection Cuaac Sequence
pdb|4A06|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Activator Ps114 Bound To The Pif-Pocket
pdb|4AW1|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Compound Ps210 Bound To The Pif-Pocket
Length = 311
Score = 55.5 bits (132), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 54/199 (27%), Positives = 85/199 (42%), Gaps = 24/199 (12%)
Query: 91 FSDANKLGEGGFGPVYKG-VLKKGDEIAVKRLPGRSGQGLREMK-----NEASVIAKVQH 144
F LGEG F V L E A+K L R ++E K E V++++ H
Sbjct: 34 FKFGKILGEGSFSTVVLARELATSREYAIKILEKR--HIIKENKVPYVTRERDVMSRLDH 91
Query: 145 KNLVRLLGCCIDKDEKILIYEYMPNKSLDFFL-----FDPTKRML-----------LDWS 188
V+L D ++ Y N L ++ FD T L
Sbjct: 92 PFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGK 151
Query: 189 ANYSSRLKVSNILLDKDINPKISDFGMARICGGNELQANTSRIVGTYGYMSPEYAIQGIF 248
LK NILL++D++ +I+DFG A++ QA + VGT Y+SPE +
Sbjct: 152 GIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSA 211
Query: 249 SIKSDVFSFGVLLLEIVSG 267
SD+++ G ++ ++V+G
Sbjct: 212 CKSSDLWALGCIIYQLVAG 230
>pdb|2YDJ|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
pdb|2YDJ|B Chain B, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 276
Score = 55.5 bits (132), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 51/191 (26%), Positives = 89/191 (46%), Gaps = 19/191 (9%)
Query: 97 LGEGGFGPVYKGVLKKGDE-IAVKRLPGRSGQGLRE-MKNEASVIAKVQHKNLVRLLGCC 154
LGEG +G V V + +E +AVK + + E +K E + + H+N+V+ G
Sbjct: 15 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEIXINKMLNHENVVKFYGHR 74
Query: 155 IDKDEKILIYEY---------------MPNKSLDFFLFDPTKRMLLDWSANYSSR-LKVS 198
+ + + L EY MP F ++ + R +K
Sbjct: 75 REGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIGITHRDIKPE 134
Query: 199 NILLDKDINPKISDFGMARICGGNELQANTSRIVGTYGYMSPEYAIQGIFSIKS-DVFSF 257
N+LLD+ N KISDFG+A + N + +++ GT Y++PE + F + DV+S
Sbjct: 135 NLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGTLPYVAPELLKRREFHAEPVDVWSC 194
Query: 258 GVLLLEIVSGK 268
G++L +++G+
Sbjct: 195 GIVLTAMLAGE 205
>pdb|4A07|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Activator Ps171 Bound To The Pif-Pocket
pdb|4AW0|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Compound Ps182 Bound To The Pif-Pocket
Length = 311
Score = 55.5 bits (132), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 54/199 (27%), Positives = 85/199 (42%), Gaps = 24/199 (12%)
Query: 91 FSDANKLGEGGFGPVYKG-VLKKGDEIAVKRLPGRSGQGLREMK-----NEASVIAKVQH 144
F LGEG F V L E A+K L R ++E K E V++++ H
Sbjct: 34 FKFGKILGEGSFSTVVLARELATSREYAIKILEKR--HIIKENKVPYVTRERDVMSRLDH 91
Query: 145 KNLVRLLGCCIDKDEKILIYEYMPNKSLDFFL-----FDPTKRML-----------LDWS 188
V+L D ++ Y N L ++ FD T L
Sbjct: 92 PFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGK 151
Query: 189 ANYSSRLKVSNILLDKDINPKISDFGMARICGGNELQANTSRIVGTYGYMSPEYAIQGIF 248
LK NILL++D++ +I+DFG A++ QA + VGT Y+SPE +
Sbjct: 152 GIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSA 211
Query: 249 SIKSDVFSFGVLLLEIVSG 267
SD+++ G ++ ++V+G
Sbjct: 212 XKSSDLWALGCIIYQLVAG 230
>pdb|2XCK|A Chain A, Crystal Structure Of Pdk1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 309
Score = 55.5 bits (132), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 54/199 (27%), Positives = 85/199 (42%), Gaps = 24/199 (12%)
Query: 91 FSDANKLGEGGFGP-VYKGVLKKGDEIAVKRLPGRSGQGLREMK-----NEASVIAKVQH 144
F LGEG F V L E A+K L R ++E K E V++++ H
Sbjct: 32 FKFGKILGEGSFSTTVLARELATSREYAIKILEKR--HIIKENKVPYVTRERDVMSRLDH 89
Query: 145 KNLVRLLGCCIDKDEKILIYEYMPNKSLDFFL-----FDPTKRML-----------LDWS 188
V+L D ++ Y N L ++ FD T L
Sbjct: 90 PFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGK 149
Query: 189 ANYSSRLKVSNILLDKDINPKISDFGMARICGGNELQANTSRIVGTYGYMSPEYAIQGIF 248
LK NILL++D++ +I+DFG A++ QA + VGT Y+SPE +
Sbjct: 150 GIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSA 209
Query: 249 SIKSDVFSFGVLLLEIVSG 267
SD+++ G ++ ++V+G
Sbjct: 210 CKSSDLWALGCIIYQLVAG 228
>pdb|3RI1|A Chain A, Crystal Structure Of The Catalytic Domain Of Fgfr2 Kinase
In Complex With Arq 069
pdb|3RI1|B Chain B, Crystal Structure Of The Catalytic Domain Of Fgfr2 Kinase
In Complex With Arq 069
Length = 313
Score = 55.5 bits (132), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 57/220 (25%), Positives = 95/220 (43%), Gaps = 42/220 (19%)
Query: 89 NKFSDANKLGEGGFGPVY--------KGVLKKGDEIAVKRLPGRSGQ-GLREMKNEASVI 139
+K + LGEG FG V K K+ +AVK L + + L ++ +E ++
Sbjct: 24 DKLTLGKPLGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMM 83
Query: 140 AKV-QHKNLVRLLGCCIDKDEKILIYEYMPNKSLDFFL-----------FD----PTKRM 183
+ +HKN++ LLG C +I EY +L +L +D P ++M
Sbjct: 84 KMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQM 143
Query: 184 LLD--WSANYS---------------SRLKVSNILLDKDINPKISDFGMARICGGNELQA 226
S Y L N+L+ ++ KI+DFG+AR +
Sbjct: 144 TFKDLVSCTYQLARGMEYLASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYK 203
Query: 227 NTSRIVGTYGYMSPEYAIQGIFSIKSDVFSFGVLLLEIVS 266
T+ +M+PE +++ +SDV+SFGVL+ EI +
Sbjct: 204 KTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 243
>pdb|3H9O|A Chain A, Phosphoinositide-Dependent Protein Kinase 1 (Pdk-1) In
Complex With Compound 9
Length = 311
Score = 55.5 bits (132), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 54/199 (27%), Positives = 85/199 (42%), Gaps = 24/199 (12%)
Query: 91 FSDANKLGEGGFGPVYKG-VLKKGDEIAVKRLPGRSGQGLREMK-----NEASVIAKVQH 144
F LGEG F V L E A+K L R ++E K E V++++ H
Sbjct: 34 FKFGKILGEGSFSTVVLARELATSREYAIKILEKR--HIIKENKVPYVTRERDVMSRLDH 91
Query: 145 KNLVRLLGCCIDKDEKILIYEYMPNKSLDFFL-----FDPTKRML-----------LDWS 188
V+L D ++ Y N L ++ FD T L
Sbjct: 92 PFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGK 151
Query: 189 ANYSSRLKVSNILLDKDINPKISDFGMARICGGNELQANTSRIVGTYGYMSPEYAIQGIF 248
LK NILL++D++ +I+DFG A++ QA + VGT Y+SPE +
Sbjct: 152 GIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSA 211
Query: 249 SIKSDVFSFGVLLLEIVSG 267
SD+++ G ++ ++V+G
Sbjct: 212 CKSSDLWALGCIIYQLVAG 230
>pdb|3QC4|A Chain A, Pdk1 In Complex With Dfg-Out Inhibitor Xxx
pdb|3QC4|B Chain B, Pdk1 In Complex With Dfg-Out Inhibitor Xxx
Length = 314
Score = 55.5 bits (132), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 54/199 (27%), Positives = 85/199 (42%), Gaps = 24/199 (12%)
Query: 91 FSDANKLGEGGFGPVYKG-VLKKGDEIAVKRLPGRSGQGLREMK-----NEASVIAKVQH 144
F LGEG F V L E A+K L R ++E K E V++++ H
Sbjct: 37 FKFGKILGEGSFSTVVLARELATSREYAIKILEKR--HIIKENKVPYVTRERDVMSRLDH 94
Query: 145 KNLVRLLGCCIDKDEKILIYEYMPNKSLDFFL-----FDPTKRML-----------LDWS 188
V+L D ++ Y N L ++ FD T L
Sbjct: 95 PFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGK 154
Query: 189 ANYSSRLKVSNILLDKDINPKISDFGMARICGGNELQANTSRIVGTYGYMSPEYAIQGIF 248
LK NILL++D++ +I+DFG A++ QA + VGT Y+SPE +
Sbjct: 155 GIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSA 214
Query: 249 SIKSDVFSFGVLLLEIVSG 267
SD+++ G ++ ++V+G
Sbjct: 215 CKSSDLWALGCIIYQLVAG 233
>pdb|2JFL|A Chain A, Crystal Structure Of Human Ste20-Like Kinase (
Diphosphorylated Form) Bound To 5- Amino-3-((4-(
Aminosulfonyl)phenyl)amino)-N-(2,6-
Difluorophenyl)-1h-1,2, 4-Triazole-1-Carbothioamide
Length = 325
Score = 55.1 bits (131), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 48/193 (24%), Positives = 87/193 (45%), Gaps = 27/193 (13%)
Query: 96 KLGEGGFGPVYKGVLKKGDEI-AVKRLPGRSGQGLREMKNEASVIAKVQHKNLVRLLGCC 154
+LG+G FG VYK K+ + A K + +S + L + E ++A H N+V+LL
Sbjct: 44 ELGDGAFGKVYKAQNKETSVLAAAKVIDTKSEEELEDYMVEIDILASCDHPNIVKLLDAF 103
Query: 155 IDKDEKILIYEYMPNKSLDFFLFDPTK-----------RMLLDWSANY-------SSRLK 196
++ ++ E+ ++D + + + + LD + NY LK
Sbjct: 104 YYENNLWILIEFCAGGAVDAVMLELERPLTESQIQVVCKQTLD-ALNYLHDNKIIHRDLK 162
Query: 197 VSNILLDKDINPKISDFGMARICGGNELQANTSRIVGTYGYMSPEYAI-----QGIFSIK 251
NIL D + K++DFG++ +GT +M+PE + + K
Sbjct: 163 AGNILFTLDGDIKLADFGVS--AKNTRXIQRRDXFIGTPYWMAPEVVMCETSKDRPYDYK 220
Query: 252 SDVFSFGVLLLEI 264
+DV+S G+ L+E+
Sbjct: 221 ADVWSLGITLIEM 233
>pdb|2JFM|A Chain A, Crystal Structure Of Human Ste20-Like Kinase (Unliganded
Form)
Length = 325
Score = 55.1 bits (131), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 48/193 (24%), Positives = 87/193 (45%), Gaps = 27/193 (13%)
Query: 96 KLGEGGFGPVYKGVLKKGDEI-AVKRLPGRSGQGLREMKNEASVIAKVQHKNLVRLLGCC 154
+LG+G FG VYK K+ + A K + +S + L + E ++A H N+V+LL
Sbjct: 44 ELGDGAFGKVYKAQNKETSVLAAAKVIDTKSEEELEDYMVEIDILASCDHPNIVKLLDAF 103
Query: 155 IDKDEKILIYEYMPNKSLDFFLFDPTK-----------RMLLDWSANY-------SSRLK 196
++ ++ E+ ++D + + + + LD + NY LK
Sbjct: 104 YYENNLWILIEFCAGGAVDAVMLELERPLTESQIQVVCKQTLD-ALNYLHDNKIIHRDLK 162
Query: 197 VSNILLDKDINPKISDFGMARICGGNELQANTSRIVGTYGYMSPEYAI-----QGIFSIK 251
NIL D + K++DFG++ +GT +M+PE + + K
Sbjct: 163 AGNILFTLDGDIKLADFGVS--AKNTRXIQRRDSFIGTPYWMAPEVVMCETSKDRPYDYK 220
Query: 252 SDVFSFGVLLLEI 264
+DV+S G+ L+E+
Sbjct: 221 ADVWSLGITLIEM 233
>pdb|2J51|A Chain A, Crystal Structure Of Human Ste20-Like Kinase Bound To 5-
Amino-3-((4-(Aminosulfonyl)phenyl)amino)-N-(2,6-
Difluorophenyl)-1h-1,2,4-Triazole-1-Carbothioamide
Length = 325
Score = 55.1 bits (131), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 48/193 (24%), Positives = 87/193 (45%), Gaps = 27/193 (13%)
Query: 96 KLGEGGFGPVYKGVLKKGDEI-AVKRLPGRSGQGLREMKNEASVIAKVQHKNLVRLLGCC 154
+LG+G FG VYK K+ + A K + +S + L + E ++A H N+V+LL
Sbjct: 44 ELGDGAFGKVYKAQNKETSVLAAAKVIDTKSEEELEDYMVEIDILASCDHPNIVKLLDAF 103
Query: 155 IDKDEKILIYEYMPNKSLDFFLFDPTK-----------RMLLDWSANY-------SSRLK 196
++ ++ E+ ++D + + + + LD + NY LK
Sbjct: 104 YYENNLWILIEFCAGGAVDAVMLELERPLTESQIQVVCKQTLD-ALNYLHDNKIIHRDLK 162
Query: 197 VSNILLDKDINPKISDFGMARICGGNELQANTSRIVGTYGYMSPEYAI-----QGIFSIK 251
NIL D + K++DFG++ +GT +M+PE + + K
Sbjct: 163 AGNILFTLDGDIKLADFGVS--AKNTRTIQRRDSFIGTPYWMAPEVVMCETSKDRPYDYK 220
Query: 252 SDVFSFGVLLLEI 264
+DV+S G+ L+E+
Sbjct: 221 ADVWSLGITLIEM 233
>pdb|2IW8|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82h-L83v-
H84d Mutant With An O6-Cyclohexylmethylguanine Inhibitor
pdb|2IW8|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82h-L83v-
H84d Mutant With An O6-Cyclohexylmethylguanine Inhibitor
Length = 302
Score = 55.1 bits (131), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 51/201 (25%), Positives = 95/201 (47%), Gaps = 31/201 (15%)
Query: 91 FSDANKLGEGGFGPVYKGVLK-KGDEIAVKRL------PGRSGQGLREMKNEASVIAKVQ 143
F K+GEG +G VYK K G+ +A+K++ G +RE+ S++ ++
Sbjct: 8 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREI----SLLKELN 63
Query: 144 HKNLVRLLGCCIDKDEKILIYEY----------------MPNKSLDFFLFDPTKRMLLDW 187
H N+V+LL +++ L++E+ +P + +LF + +
Sbjct: 64 HPNIVKLLDVIHTENKLYLVFEHVDQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCH 123
Query: 188 SANYSSR-LKVSNILLDKDINPKISDFGMARICGGNELQANTSRIVGTYGYMSPEYAIQ- 245
S R LK N+L++ + K++DFG+AR G ++ +V T Y +PE +
Sbjct: 124 SHRVLHRDLKPQNLLINTEGAIKLADFGLAR-AFGVPVRTYXHEVV-TLWYRAPEILLGC 181
Query: 246 GIFSIKSDVFSFGVLLLEIVS 266
+S D++S G + E+V+
Sbjct: 182 KYYSTAVDIWSLGCIFAEMVT 202
>pdb|1YRP|A Chain A, Catalytic Domain Of Human Zip Kinase Phosphorylated At
Thr265
pdb|1YRP|B Chain B, Catalytic Domain Of Human Zip Kinase Phosphorylated At
Thr265
Length = 278
Score = 55.1 bits (131), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 60/207 (28%), Positives = 98/207 (47%), Gaps = 32/207 (15%)
Query: 89 NKFSDANKLGEGGFGPVYKGVLK-KGDEIAVK-----RLPG-RSGQGLREMKNEASVIAK 141
+ + +LG G F V K K G E A K RL R G E++ E +++ +
Sbjct: 12 DHYEMGEELGSGQFAIVRKCRQKGTGKEYAAKFIKKRRLSSSRRGVSREEIEREVNILRE 71
Query: 142 VQHKNLVRLLGCCIDKDEKILIYEYMPNKSLDFFLFDPTK----------RMLLDWSANY 191
++H N++ L +K + +LI E + L FL + + +LD
Sbjct: 72 IRHPNIITLHDIFENKTDVVLILELVSGGELFDFLAEKESLTEDEATQFLKQILDGVHYL 131
Query: 192 SSR------LKVSNI-LLDKDI-NPKIS--DFGMA-RICGGNELQANTSRIVGTYGYMSP 240
S+ LK NI LLDK++ NP+I DFG+A +I GNE + I GT +++P
Sbjct: 132 HSKRIAHFDLKPENIMLLDKNVPNPRIKLIDFGIAHKIEAGNEFK----NIFGTPEFVAP 187
Query: 241 EYAIQGIFSIKSDVFSFGVLLLEIVSG 267
E +++D++S GV+ ++SG
Sbjct: 188 EIVNYEPLGLEADMWSIGVITYILLSG 214
>pdb|2W9F|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 55.1 bits (131), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 58/211 (27%), Positives = 101/211 (47%), Gaps = 33/211 (15%)
Query: 87 ATNKFSDANKLGEGGFGPVYKGV-LKKGDEIAVK--RLP-GRSGQGLREMKNEASV--IA 140
AT+++ ++G G +G VYK G +A+K R+P G G + ++ A + +
Sbjct: 2 ATSRYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGEEGLPISTVREVALLRRLE 61
Query: 141 KVQHKNLVRLLGCC----IDKDEKI-LIYEYMPNKSLDFFL-------------FDPTKR 182
+H N+VRL+ C D++ K+ L++E++ ++ L +L D ++
Sbjct: 62 AFEHPNVVRLMDVCATSRTDREIKVTLVFEHV-DQDLRTYLDKAPPPGLPAETIKDLMRQ 120
Query: 183 ML--LDW-SAN--YSSRLKVSNILLDKDINPKISDFGMARICGGNELQANTSRIVGTYGY 237
L LD+ AN LK NIL+ K++DFG+ARI Q +V T Y
Sbjct: 121 FLRGLDFLHANCIVHRDLKPENILVTSGGTVKLADFGLARIYS---YQMALFPVVVTLWY 177
Query: 238 MSPEYAIQGIFSIKSDVFSFGVLLLEIVSGK 268
+PE +Q ++ D++S G + E+ K
Sbjct: 178 RAPEVLLQSTYATPVDMWSVGCIFAEMFRRK 208
>pdb|2Q0N|A Chain A, Structure Of Human P21 Activating Kinase 4 (Pak4) In
Complex With A Consensus Peptide
Length = 301
Score = 54.7 bits (130), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 48/192 (25%), Positives = 87/192 (45%), Gaps = 24/192 (12%)
Query: 96 KLGEGGFGPVYKGVLKK-GDEIAVKRLPGRSGQGLREMKNEASVIAKVQHKNLVRLLGCC 154
K+GEG G V ++ G +AVK++ R Q + NE ++ QH+N+V +
Sbjct: 36 KIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSY 95
Query: 155 IDKDEKILIYEYMPNKSLDFFLFDPTKRM-----------------LLDWSANYSSRLKV 197
+ DE ++ E++ +L + RM +L +K
Sbjct: 96 LVGDELWVVMEFLEGGALTDIVTH--TRMNEEQIAAVCLAVLQALSVLHAQGVIHRDIKS 153
Query: 198 SNILLDKDINPKISDFGMARICGGNELQANTSR-IVGTYGYMSPEYAIQGIFSIKSDVFS 256
+ILL D K+SDFG C + + +VGT +M+PE + + + D++S
Sbjct: 154 DSILLTHDGRVKLSDFGF---CAQVSKEVPRRKXLVGTPYWMAPELISRLPYGPEVDIWS 210
Query: 257 FGVLLLEIVSGK 268
G++++E+V G+
Sbjct: 211 LGIMVIEMVDGE 222
>pdb|2CDZ|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With Cgp74514a
pdb|2J0I|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4
Length = 303
Score = 54.7 bits (130), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 48/192 (25%), Positives = 87/192 (45%), Gaps = 24/192 (12%)
Query: 96 KLGEGGFGPVYKGVLKK-GDEIAVKRLPGRSGQGLREMKNEASVIAKVQHKNLVRLLGCC 154
K+GEG G V ++ G +AVK++ R Q + NE ++ QH+N+V +
Sbjct: 38 KIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSY 97
Query: 155 IDKDEKILIYEYMPNKSLDFFLFDPTKRM-----------------LLDWSANYSSRLKV 197
+ DE ++ E++ +L + RM +L +K
Sbjct: 98 LVGDELWVVMEFLEGGALTDIVTH--TRMNEEQIAAVCLAVLQALSVLHAQGVIHRDIKS 155
Query: 198 SNILLDKDINPKISDFGMARICGGNELQANTSR-IVGTYGYMSPEYAIQGIFSIKSDVFS 256
+ILL D K+SDFG C + + +VGT +M+PE + + + D++S
Sbjct: 156 DSILLTHDGRVKLSDFGF---CAQVSKEVPRRKXLVGTPYWMAPELISRLPYGPEVDIWS 212
Query: 257 FGVLLLEIVSGK 268
G++++E+V G+
Sbjct: 213 LGIMVIEMVDGE 224
>pdb|4FV6|A Chain A, Crystal Structure Of The Erk2 Complexed With E57
Length = 360
Score = 54.7 bits (130), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 51/204 (25%), Positives = 97/204 (47%), Gaps = 27/204 (13%)
Query: 90 KFSDANKLGEGGFGPV---YKGVLKKGDEIAVKRL-PGRSGQGLREMKNEASVIAKVQHK 145
++++ + +GEG +G V Y V K +A+K++ P + E ++ + +H+
Sbjct: 24 RYTNLSYIGEGAYGMVCSAYDNVNKV--RVAIKKISPFEHQTYCQRTLREIKILLRFRHE 81
Query: 146 NLV------------RLLGCCIDKD------EKILIYEYMPNKSLDFFLFDPTKRMLLDW 187
N++ ++ I +D K+L +++ N + +FL+ + +
Sbjct: 82 NIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRGLKYIH 141
Query: 188 SANYSSR-LKVSNILLDKDINPKISDFGMARICGGNELQAN-TSRIVGTYGYMSPEYAIQ 245
SAN R LK SN+LL+ + KI DFG+AR+ + + V T Y +PE +
Sbjct: 142 SANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLN 201
Query: 246 GIFSIKS-DVFSFGVLLLEIVSGK 268
KS D++S G +L E++S +
Sbjct: 202 SKGYTKSIDIWSVGCILAEMLSNR 225
>pdb|4G31|A Chain A, Crystal Structure Of Gsk6414 Bound To Perk (R587-R1092,
Delete A660- T867) At 2.28 A Resolution
pdb|4G34|A Chain A, Crystal Structure Of Gsk6924 Bound To Perk (R587-R1092,
Delete A660- T867) At 2.70 A Resolution
Length = 299
Score = 54.7 bits (130), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 59/219 (26%), Positives = 87/219 (39%), Gaps = 45/219 (20%)
Query: 91 FSDANKLGEGGFGPVYKGVLKKGD-EIAVKR--LPGRSGQGLREMKNEASVIAKVQHKNL 147
F LG GGFG V++ K D A+KR LP R + M+ E +AK++H +
Sbjct: 7 FEPIQCLGRGGFGVVFEAKNKVDDCNYAIKRIRLPNRELAREKVMR-EVKALAKLEHPGI 65
Query: 148 VRLLGCCIDKD---------EKILIY------------EYMPNKS----------LDFFL 176
VR ++K+ K+ +Y ++M + L FL
Sbjct: 66 VRYFNAWLEKNTTEKLQPSSPKVYLYIQMQLCRKENLKDWMNGRCTIEERERSVCLHIFL 125
Query: 177 FDPTKRMLLDWSANYSSRLKVSNILLDKDINPKISDFGMARICGGNELQ----------A 226
L LK SNI D K+ DFG+ +E + A
Sbjct: 126 QIAEAVEFLHSKGLMHRDLKPSNIFFTMDDVVKVGDFGLVTAMDQDEEEQTVLTPMPAYA 185
Query: 227 NTSRIVGTYGYMSPEYAIQGIFSIKSDVFSFGVLLLEIV 265
+ VGT YMSPE +S K D+FS G++L E++
Sbjct: 186 RHTGQVGTKLYMSPEQIHGNSYSHKVDIFSLGLILFELL 224
>pdb|4AGC|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Axitinib (Ag-013736)
(N-Methyl-2-(
3-((E)-2-Pyridin-2-Yl-Vinyl)-1h-Indazol-6-Ylsulfanyl)-
Benzamide)
pdb|4AGD|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Sunitinib (Su11248) (N-2-
Diethylaminoethyl)-5-((Z)-(5-Fluoro-2-Oxo-1h-Indol-3-
Ylidene)methyl)-2,4-Dimethyl-1h-Pyrrole-3-Carboxamide)
pdb|4ASD|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Sorafenib (Bay 43-9006)
pdb|4ASE|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Tivozanib (Av-951)
Length = 353
Score = 54.7 bits (130), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 72/284 (25%), Positives = 113/284 (39%), Gaps = 55/284 (19%)
Query: 24 LIFYCARRKPRSRGEDLMTLDLDLNLKANNVNIELPVNSKQTKRSKKKEVDQLPLFSFSS 83
++F R R+ G +L T L + + + ELP++ + ++LP + S
Sbjct: 13 VLFQGPRTVKRANGGELKTGYLSIVMDPD----ELPLD---------EHCERLP-YDASK 58
Query: 84 VSTATNKFSDANKLGEGGFGPVYK----GVLKKGD--EIAVKRL-PGRSGQGLREMKNEA 136
++ LG G FG V + G+ K +AVK L G + R + +E
Sbjct: 59 WEFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSEL 118
Query: 137 SVIAKV-QHKNLVRLLGCCIDKDEKILIY------------------EYMPNK------- 170
++ + H N+V LLG C +++ E++P K
Sbjct: 119 KILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLY 178
Query: 171 -------SLDFFLFDPTKRMLLDWSANYSSR-LKVSNILLDKDINPKISDFGMARICGGN 222
L + F K M S R L NILL + KI DFG+AR +
Sbjct: 179 KDFLTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKD 238
Query: 223 ELQANTSRIVGTYGYMSPEYAIQGIFSIKSDVFSFGVLLLEIVS 266
+M+PE +++I+SDV+SFGVLL EI S
Sbjct: 239 PDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 282
>pdb|1YWN|A Chain A, Vegfr2 In Complex With A Novel
4-amino-furo[2,3-d]pyrimidine
Length = 316
Score = 54.7 bits (130), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 64/242 (26%), Positives = 94/242 (38%), Gaps = 49/242 (20%)
Query: 74 DQLPL--------FSFSSVSTATNKFSDANKLGEGGFGPVYK----GVLKKGD--EIAVK 119
D+LPL + S ++ LG G FG V + G+ K +AVK
Sbjct: 4 DELPLDEHCERLPYDASKWEFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVK 63
Query: 120 RL-PGRSGQGLREMKNEASVIAKV-QHKNLVRLLGCCIDKDEKILIY------------- 164
L G + R + +E ++ + H N+V LLG C +++
Sbjct: 64 MLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYL 123
Query: 165 -----EYMPNK--------------SLDFFLFDPTKRMLLDWSANYSSR-LKVSNILLDK 204
E++P K L + F K M S R L NILL +
Sbjct: 124 RSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLSE 183
Query: 205 DINPKISDFGMARICGGNELQANTSRIVGTYGYMSPEYAIQGIFSIKSDVFSFGVLLLEI 264
KI DFG+AR + +M+PE +++I+SDV+SFGVLL EI
Sbjct: 184 KNVVKICDFGLARDIXKDPDXVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEI 243
Query: 265 VS 266
S
Sbjct: 244 FS 245
>pdb|4APC|A Chain A, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
pdb|4APC|B Chain B, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
pdb|4B9D|A Chain A, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
With Inhibitor.
pdb|4B9D|B Chain B, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
With Inhibitor
Length = 350
Score = 54.7 bits (130), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 55/212 (25%), Positives = 89/212 (41%), Gaps = 37/212 (17%)
Query: 87 ATNKFSDANKLGEGGFGPVYKGVLKKG---------DEIAVKRLPGRSGQGLREMKNEAS 137
+ K+ K+GEG FG K +L K EI + R+ S + E + E +
Sbjct: 22 SMEKYVRLQKIGEGSFG---KAILVKSTEDGRQYVIKEINISRM---SSKEREESRREVA 75
Query: 138 VIAKVQHKNLVRLLGCCIDKDEKILIYEYMPNKSLDFFLFDPTKRML------LDWSANY 191
V+A ++H N+V+ + ++ +Y L F + K +L LDW
Sbjct: 76 VLANMKHPNIVQYRESFEENGSLYIVMDYCEGGDL-FKRINAQKGVLFQEDQILDWFVQI 134
Query: 192 SSRLK-------------VSNILLDKDINPKISDFGMARICGGNELQANTSRIVGTYGYM 238
LK NI L KD ++ DFG+AR+ A +GT Y+
Sbjct: 135 CLALKHVHDRKILHRDIKSQNIFLTKDGTVQLGDFGIARVLNSTVELARAC--IGTPYYL 192
Query: 239 SPEYAIQGIFSIKSDVFSFGVLLLEIVSGKKT 270
SPE ++ KSD+++ G +L E+ + K
Sbjct: 193 SPEICENKPYNNKSDIWALGCVLYELCTLKHA 224
>pdb|2BVA|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4
pdb|2BVA|B Chain B, Crystal Structure Of The Human P21-Activated Kinase 4
Length = 292
Score = 54.7 bits (130), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 48/192 (25%), Positives = 87/192 (45%), Gaps = 24/192 (12%)
Query: 96 KLGEGGFGPVYKGVLKK-GDEIAVKRLPGRSGQGLREMKNEASVIAKVQHKNLVRLLGCC 154
K+GEG G V ++ G +AVK++ R Q + NE ++ QH+N+V +
Sbjct: 27 KIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSY 86
Query: 155 IDKDEKILIYEYMPNKSLDFFLFDPTKRM-----------------LLDWSANYSSRLKV 197
+ DE ++ E++ +L + RM +L +K
Sbjct: 87 LVGDELWVVMEFLEGGALTDIVTH--TRMNEEQIAAVCLAVLQALSVLHAQGVIHRDIKS 144
Query: 198 SNILLDKDINPKISDFGMARICGGNELQANTSR-IVGTYGYMSPEYAIQGIFSIKSDVFS 256
+ILL D K+SDFG C + + +VGT +M+PE + + + D++S
Sbjct: 145 DSILLTHDGRVKLSDFGF---CAQVSKEVPRRKXLVGTPYWMAPELISRLPYGPEVDIWS 201
Query: 257 FGVLLLEIVSGK 268
G++++E+V G+
Sbjct: 202 LGIMVIEMVDGE 213
>pdb|2X4Z|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With Pf-03758309
pdb|4APP|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With (S)-N-(5-(3-Benzyl-1-Methylpiperazine-4-
Carbonyl)-6,6-Dimethyl-1,4,5,6-Tetrahydropyrrolo(3,4-C)
Pyrazol-3-Yl)-3-Phenoxybenzamide
Length = 296
Score = 54.7 bits (130), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 48/192 (25%), Positives = 87/192 (45%), Gaps = 24/192 (12%)
Query: 96 KLGEGGFGPVYKGVLKK-GDEIAVKRLPGRSGQGLREMKNEASVIAKVQHKNLVRLLGCC 154
K+GEG G V ++ G +AVK++ R Q + NE ++ QH+N+V +
Sbjct: 31 KIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSY 90
Query: 155 IDKDEKILIYEYMPNKSLDFFLFDPTKRM-----------------LLDWSANYSSRLKV 197
+ DE ++ E++ +L + RM +L +K
Sbjct: 91 LVGDELWVVMEFLEGGALTDIVTH--TRMNEEQIAAVCLAVLQALSVLHAQGVIHRDIKS 148
Query: 198 SNILLDKDINPKISDFGMARICGGNELQANTSR-IVGTYGYMSPEYAIQGIFSIKSDVFS 256
+ILL D K+SDFG C + + +VGT +M+PE + + + D++S
Sbjct: 149 DSILLTHDGRVKLSDFG---FCAQVSKEVPRRKXLVGTPYWMAPELISRLPYGPEVDIWS 205
Query: 257 FGVLLLEIVSGK 268
G++++E+V G+
Sbjct: 206 LGIMVIEMVDGE 217
>pdb|2Y9Q|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4FMQ|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 54.7 bits (130), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 51/204 (25%), Positives = 97/204 (47%), Gaps = 27/204 (13%)
Query: 90 KFSDANKLGEGGFGPV---YKGVLKKGDEIAVKRL-PGRSGQGLREMKNEASVIAKVQHK 145
++++ + +GEG +G V Y V K +A+K++ P + E ++ + +H+
Sbjct: 26 RYTNLSYIGEGAYGMVCSAYDNVNKV--RVAIKKISPFEHQTYCQRTLREIKILLRFRHE 83
Query: 146 NLV------------RLLGCCIDKD------EKILIYEYMPNKSLDFFLFDPTKRMLLDW 187
N++ ++ I +D K+L +++ N + +FL+ + +
Sbjct: 84 NIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRGLKYIH 143
Query: 188 SANYSSR-LKVSNILLDKDINPKISDFGMARICGGNELQAN-TSRIVGTYGYMSPEYAIQ 245
SAN R LK SN+LL+ + KI DFG+AR+ + + V T Y +PE +
Sbjct: 144 SANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLN 203
Query: 246 GIFSIKS-DVFSFGVLLLEIVSGK 268
KS D++S G +L E++S +
Sbjct: 204 SKGYTKSIDIWSVGCILAEMLSNR 227
>pdb|4FUX|A Chain A, Crystal Structure Of The Erk2 Complexed With E75
pdb|4FV1|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek4
pdb|4FV2|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek5
pdb|4FV3|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek6
pdb|4FV4|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek7
pdb|4FV5|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek9
pdb|4FV8|A Chain A, Crystal Structure Of The Erk2 Complexed With E63
pdb|4FV9|A Chain A, Crystal Structure Of The Erk2 Complexed With E71
pdb|4G6N|A Chain A, Crystal Structure Of The Erk2
Length = 360
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 51/204 (25%), Positives = 97/204 (47%), Gaps = 27/204 (13%)
Query: 90 KFSDANKLGEGGFGPV---YKGVLKKGDEIAVKRL-PGRSGQGLREMKNEASVIAKVQHK 145
++++ + +GEG +G V Y V K +A+K++ P + E ++ + +H+
Sbjct: 24 RYTNLSYIGEGAYGMVCSAYDNVNKV--RVAIKKISPFEHQTYCQRTLREIKILLRFRHE 81
Query: 146 NLV------------RLLGCCIDKD------EKILIYEYMPNKSLDFFLFDPTKRMLLDW 187
N++ ++ I +D K+L +++ N + +FL+ + +
Sbjct: 82 NIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRGLKYIH 141
Query: 188 SANYSSR-LKVSNILLDKDINPKISDFGMARICGGNELQAN-TSRIVGTYGYMSPEYAIQ 245
SAN R LK SN+LL+ + KI DFG+AR+ + + V T Y +PE +
Sbjct: 142 SANVLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLN 201
Query: 246 GIFSIKS-DVFSFGVLLLEIVSGK 268
KS D++S G +L E++S +
Sbjct: 202 SKGYTKSIDIWSVGCILAEMLSNR 225
>pdb|1WZY|A Chain A, Crystal Structure Of Human Erk2 Complexed With A
Pyrazolopyridazine Derivative
pdb|3W55|A Chain A, The Structure Of Erk2 In Complex With Fr148083
Length = 368
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 51/204 (25%), Positives = 97/204 (47%), Gaps = 27/204 (13%)
Query: 90 KFSDANKLGEGGFGPV---YKGVLKKGDEIAVKRL-PGRSGQGLREMKNEASVIAKVQHK 145
++++ + +GEG +G V Y V K +A+K++ P + E ++ + +H+
Sbjct: 32 RYTNLSYIGEGAYGMVCSAYDNVNKV--RVAIKKISPFEHQTYCQRTLREIKILLRFRHE 89
Query: 146 NLV------------RLLGCCIDKD------EKILIYEYMPNKSLDFFLFDPTKRMLLDW 187
N++ ++ I +D K+L +++ N + +FL+ + +
Sbjct: 90 NIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRGLKYIH 149
Query: 188 SANYSSR-LKVSNILLDKDINPKISDFGMARICGGNELQAN-TSRIVGTYGYMSPEYAIQ 245
SAN R LK SN+LL+ + KI DFG+AR+ + + V T Y +PE +
Sbjct: 150 SANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLN 209
Query: 246 GIFSIKS-DVFSFGVLLLEIVSGK 268
KS D++S G +L E++S +
Sbjct: 210 SKGYTKSIDIWSVGCILAEMLSNR 233
>pdb|1TVO|A Chain A, The Structure Of Erk2 In Complex With A Small Molecule
Inhibitor
Length = 368
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 51/204 (25%), Positives = 97/204 (47%), Gaps = 27/204 (13%)
Query: 90 KFSDANKLGEGGFGPV---YKGVLKKGDEIAVKRL-PGRSGQGLREMKNEASVIAKVQHK 145
++++ + +GEG +G V Y V K +A+K++ P + E ++ + +H+
Sbjct: 24 RYTNLSYIGEGAYGMVCSAYDNVNKV--RVAIKKISPFEHQTYCQRTLREIKILLRFRHE 81
Query: 146 NLV------------RLLGCCIDKD------EKILIYEYMPNKSLDFFLFDPTKRMLLDW 187
N++ ++ I +D K+L +++ N + +FL+ + +
Sbjct: 82 NIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRGLKYIH 141
Query: 188 SANYSSR-LKVSNILLDKDINPKISDFGMARICGGNELQAN-TSRIVGTYGYMSPEYAIQ 245
SAN R LK SN+LL+ + KI DFG+AR+ + + V T Y +PE +
Sbjct: 142 SANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLN 201
Query: 246 GIFSIKS-DVFSFGVLLLEIVSGK 268
KS D++S G +L E++S +
Sbjct: 202 SKGYTKSIDIWSVGCILAEMLSNR 225
>pdb|2OJG|A Chain A, Crystal Structure Of Erk2 In Complex With
N,n-dimethyl-4-(4-
Phenyl-1h-pyrazol-3-yl)-1h-pyrrole-2-carboxamide
pdb|2OJI|A Chain A, Crystal Structure Of Erk2 In Complex With
N-Benzyl-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|2OJJ|A Chain A, Crystal Structure Of Erk2 In Complex With (S)-N-(1-(3-
Chloro-4-Fluorophenyl)-2-Hydroxyethyl)-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|3I5Z|A Chain A, Crystal Structure Of Erk2 Bound To
(S)-N-(2-Hydroxy-1-Phenylethyl)-4-
(5-Methyl-2-(Phenylamino)pyrimidin-4-Yl)-1h-Pyrrole-2-
Carboxamide
pdb|3I60|A Chain A, Crystal Structure Of Erk2 Bound To
(s)-4-(2-(2-chlorophenylamino)-5-
Methylpyrimidin-4-yl)-n-(2-hydroxy-1-phenylethyl)-1h-
pyrrole-2- Carboxamide
Length = 380
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 51/204 (25%), Positives = 97/204 (47%), Gaps = 27/204 (13%)
Query: 90 KFSDANKLGEGGFGPV---YKGVLKKGDEIAVKRL-PGRSGQGLREMKNEASVIAKVQHK 145
++++ + +GEG +G V Y V K +A+K++ P + E ++ + +H+
Sbjct: 44 RYTNLSYIGEGAYGMVCSAYDNVNKV--RVAIKKISPFEHQTYCQRTLREIKILLRFRHE 101
Query: 146 NLV------------RLLGCCIDKD------EKILIYEYMPNKSLDFFLFDPTKRMLLDW 187
N++ ++ I +D K+L +++ N + +FL+ + +
Sbjct: 102 NIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRGLKYIH 161
Query: 188 SANYSSR-LKVSNILLDKDINPKISDFGMARICGGNELQAN-TSRIVGTYGYMSPEYAIQ 245
SAN R LK SN+LL+ + KI DFG+AR+ + + V T Y +PE +
Sbjct: 162 SANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLN 221
Query: 246 GIFSIKS-DVFSFGVLLLEIVSGK 268
KS D++S G +L E++S +
Sbjct: 222 SKGYTKSIDIWSVGCILAEMLSNR 245
>pdb|3H4J|B Chain B, Crystal Structure Of Pombe Ampk Kdaid Fragment
pdb|3H4J|A Chain A, Crystal Structure Of Pombe Ampk Kdaid Fragment
Length = 336
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 52/196 (26%), Positives = 94/196 (47%), Gaps = 31/196 (15%)
Query: 97 LGEGGFGPV-----YKGVLKKGDEIAVKRLPGRSGQGLREMKNEASVIAKVQHKNLVRLL 151
LGEG FG V YK K + ++L +S +R ++ E S + ++H ++++L
Sbjct: 17 LGEGSFGKVKLATHYKTQQKVALKFISRQLLKKSDMHMR-VEREISYLKLLRHPHIIKLY 75
Query: 152 GCCIDKDEKILIYEYMPNKSLDFFLFDPTKRMLLD----------WSANYSSR------- 194
+ +++ EY + D+ + KRM D + Y R
Sbjct: 76 DVITTPTDIVMVIEYAGGELFDYIV--EKKRMTEDEGRRFFQQIICAIEYCHRHKIVHRD 133
Query: 195 LKVSNILLDKDINPKISDFGMARI-CGGNELQANTSRIVGTYGYMSPEYAIQGIFS-IKS 252
LK N+LLD ++N KI+DFG++ I GN L+ + G+ Y +PE +++ +
Sbjct: 134 LKPENLLLDDNLNVKIADFGLSNIMTDGNFLKTSC----GSPNYAAPEVINGKLYAGPEV 189
Query: 253 DVFSFGVLLLEIVSGK 268
DV+S G++L ++ G+
Sbjct: 190 DVWSCGIVLYVMLVGR 205
>pdb|4FV7|A Chain A, Crystal Structure Of The Erk2 Complexed With E94
pdb|4G6O|A Chain A, Crystal Structure Of The Erk2
Length = 360
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 51/204 (25%), Positives = 97/204 (47%), Gaps = 27/204 (13%)
Query: 90 KFSDANKLGEGGFGPV---YKGVLKKGDEIAVKRL-PGRSGQGLREMKNEASVIAKVQHK 145
++++ + +GEG +G V Y V K +A+K++ P + E ++ + +H+
Sbjct: 24 RYTNLSYIGEGAYGMVCSAYDNVNKV--RVAIKKISPFEHQTYCQRTLREIKILLRFRHE 81
Query: 146 NLV------------RLLGCCIDKD------EKILIYEYMPNKSLDFFLFDPTKRMLLDW 187
N++ ++ I +D K+L +++ N + +FL+ + +
Sbjct: 82 NIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRGLKYIH 141
Query: 188 SANYSSR-LKVSNILLDKDINPKISDFGMARICGGNELQAN-TSRIVGTYGYMSPEYAIQ 245
SAN R LK SN+LL+ + KI DFG+AR+ + + V T Y +PE +
Sbjct: 142 SANVLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLN 201
Query: 246 GIFSIKS-DVFSFGVLLLEIVSGK 268
KS D++S G +L E++S +
Sbjct: 202 SKGYTKSIDIWSVGCILAEMLSNR 225
>pdb|3SA0|A Chain A, Complex Of Erk2 With Norathyriol
pdb|4FUY|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek2
pdb|4FV0|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek3
Length = 360
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 51/204 (25%), Positives = 97/204 (47%), Gaps = 27/204 (13%)
Query: 90 KFSDANKLGEGGFGPV---YKGVLKKGDEIAVKRL-PGRSGQGLREMKNEASVIAKVQHK 145
++++ + +GEG +G V Y V K +A+K++ P + E ++ + +H+
Sbjct: 24 RYTNLSYIGEGAYGMVCSAYDNVNKV--RVAIKKISPFEHQTYCQRTLREIKILLRFRHE 81
Query: 146 NLV------------RLLGCCIDKD------EKILIYEYMPNKSLDFFLFDPTKRMLLDW 187
N++ ++ I +D K+L +++ N + +FL+ + +
Sbjct: 82 NIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRGLKYIH 141
Query: 188 SANYSSR-LKVSNILLDKDINPKISDFGMARICGGNELQAN-TSRIVGTYGYMSPEYAIQ 245
SAN R LK SN+LL+ + KI DFG+AR+ + + V T Y +PE +
Sbjct: 142 SANVLHRDLKPSNLLLNTTXDLKIXDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLN 201
Query: 246 GIFSIKS-DVFSFGVLLLEIVSGK 268
KS D++S G +L E++S +
Sbjct: 202 SKGYTKSIDIWSVGCILAEMLSNR 225
>pdb|3DAE|A Chain A, Crystal Structure Of Phosphorylated Snf1 Kinase Domain
pdb|3DAE|B Chain B, Crystal Structure Of Phosphorylated Snf1 Kinase Domain
Length = 283
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 53/187 (28%), Positives = 91/187 (48%), Gaps = 27/187 (14%)
Query: 97 LGEGGFGPVYKGV-LKKGDEIAVK----RLPGRSGQGLREMKNEASVIAKVQHKNLVRLL 151
LGEG FG V G ++A+K ++ +S R ++ E S + ++H ++++L
Sbjct: 22 LGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGR-IEREISYLRLLRHPHIIKLY 80
Query: 152 GCCIDKDEKILIYEYMPNKSLDFF-----LFDPTKRMLLDW---SANYSSR-------LK 196
KDE I++ EY N+ D+ + + R + Y R LK
Sbjct: 81 DVIKSKDEIIMVIEYAGNELFDYIVQRDKMSEQEARRFFQQIISAVEYCHRHKIVHRDLK 140
Query: 197 VSNILLDKDINPKISDFGMARI-CGGNELQANTSRIVGTYGYMSPEYAIQGIFS-IKSDV 254
N+LLD+ +N KI+DFG++ I GN L+ + G+ Y +PE +++ + DV
Sbjct: 141 PENLLLDEHLNVKIADFGLSNIMTDGNFLKTSC----GSPNYAAPEVISGKLYAGPEVDV 196
Query: 255 FSFGVLL 261
+S GV+L
Sbjct: 197 WSCGVIL 203
>pdb|3HYH|A Chain A, Crystal Structure Of The Protein Kinase Domain Of Yeast
Amp-Activated Protein Kinase Snf1
pdb|3HYH|B Chain B, Crystal Structure Of The Protein Kinase Domain Of Yeast
Amp-Activated Protein Kinase Snf1
Length = 275
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 54/188 (28%), Positives = 89/188 (47%), Gaps = 29/188 (15%)
Query: 97 LGEGGFGPVYKGV-LKKGDEIAVK-----RLPGRSGQGLREMKNEASVIAKVQHKNLVRL 150
LGEG FG V G ++A+K L QG ++ E S + ++H ++++L
Sbjct: 21 LGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQG--RIEREISYLRLLRHPHIIKL 78
Query: 151 LGCCIDKDEKILIYEYMPNKSLDFF-----LFDPTKRMLLDW---SANYSSR-------L 195
KDE I++ EY N+ D+ + + R + Y R L
Sbjct: 79 YDVIKSKDEIIMVIEYAGNELFDYIVQRDKMSEQEARRFFQQIISAVEYCHRHKIVHRDL 138
Query: 196 KVSNILLDKDINPKISDFGMARI-CGGNELQANTSRIVGTYGYMSPEYAIQGIFS-IKSD 253
K N+LLD+ +N KI+DFG++ I GN L+ + G+ Y +PE +++ + D
Sbjct: 139 KPENLLLDEHLNVKIADFGLSNIMTDGNFLKTSC----GSPNYAAPEVISGKLYAGPEVD 194
Query: 254 VFSFGVLL 261
V+S GV+L
Sbjct: 195 VWSCGVIL 202
>pdb|3CIK|A Chain A, Human Grk2 In Complex With Gbetagamma Subunits
pdb|3V5W|A Chain A, Human G Protein-Coupled Receptor Kinase 2 In Complex With
Soluble Gbetagamma Subunits And Paroxetine
Length = 689
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 34/94 (36%), Positives = 55/94 (58%), Gaps = 11/94 (11%)
Query: 195 LKVSNILLDKDINPKISDFGMARICGGNELQANTSRIVGTYGYMSPEYAIQGI-FSIKSD 253
LK +NILLD+ + +ISD G+A C ++ + + S VGT+GYM+PE +G+ + +D
Sbjct: 318 LKPANILLDEHGHVRISDLGLA--CDFSKKKPHAS--VGTHGYMAPEVLQKGVAYDSSAD 373
Query: 254 VFSFGVLLLEIVSG------KKTTGFYRTDSLTL 281
FS G +L +++ G KT + D +TL
Sbjct: 374 WFSLGCMLFKLLRGHSPFRQHKTKDKHEIDRMTL 407
>pdb|3MN3|A Chain A, An Inhibited Conformation For The Protein Kinase Domain Of
The Saccharomyces Cerevisiae Ampk Homolog Snf1
Length = 271
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 54/188 (28%), Positives = 89/188 (47%), Gaps = 29/188 (15%)
Query: 97 LGEGGFGPVYKGV-LKKGDEIAVK-----RLPGRSGQGLREMKNEASVIAKVQHKNLVRL 150
LGEG FG V G ++A+K L QG ++ E S + ++H ++++L
Sbjct: 12 LGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQG--RIEREISYLRLLRHPHIIKL 69
Query: 151 LGCCIDKDEKILIYEYMPNKSLDFF-----LFDPTKRMLLDW---SANYSSR-------L 195
KDE I++ EY N+ D+ + + R + Y R L
Sbjct: 70 YDVIKSKDEIIMVIEYAGNELFDYIVQRDKMSEQEARRFFQQIISAVEYCHRHKIVHRDL 129
Query: 196 KVSNILLDKDINPKISDFGMARI-CGGNELQANTSRIVGTYGYMSPEYAIQGIFS-IKSD 253
K N+LLD+ +N KI+DFG++ I GN L+ + G+ Y +PE +++ + D
Sbjct: 130 KPENLLLDEHLNVKIADFGLSNIMTDGNFLKTSC----GSPNYAAPEVISGKLYAGPEVD 185
Query: 254 VFSFGVLL 261
V+S GV+L
Sbjct: 186 VWSCGVIL 193
>pdb|2P2I|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Nicotinamide Inhibitor
pdb|2P2I|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Nicotinamide Inhibitor
pdb|3EFL|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Motesanib
pdb|3EFL|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Motesanib
Length = 314
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 62/237 (26%), Positives = 94/237 (39%), Gaps = 42/237 (17%)
Query: 71 KEVDQLPLFSFSSVSTATNKFSDANKLGEGGFGPVYK----GVLKKGD--EIAVKRL-PG 123
+ ++LP + S ++ LG G FG V + G+ K +AVK L G
Sbjct: 1 EHAERLP-YDASKWEFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEG 59
Query: 124 RSGQGLREMKNEASVIAKV-QHKNLVRLLGCCIDKDEKILIY------------------ 164
+ R + +E ++ + H N+V LLG C +++
Sbjct: 60 ATHSEHRALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRN 119
Query: 165 EYMPNK--------------SLDFFLFDPTKRMLLDWSANYSSR-LKVSNILLDKDINPK 209
E++P K L + F K M S R L NILL + K
Sbjct: 120 EFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVK 179
Query: 210 ISDFGMARICGGNELQANTSRIVGTYGYMSPEYAIQGIFSIKSDVFSFGVLLLEIVS 266
I DFG+AR + +M+PE +++I+SDV+SFGVLL EI S
Sbjct: 180 ICDFGLARDIXKDPDXVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 236
>pdb|2P2H|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridinyl-Triazine Inhibitor
pdb|2QU5|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzimidazole Inhibitor
pdb|2QU6|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzoxazole Inhibitor
pdb|2QU6|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzoxazole Inhibitor
pdb|3B8Q|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8Q|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8R|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8R|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|2RL5|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A 2,3-Dihydro-1,4-Benzoxazine Inhibitor
pdb|3BE2|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzamide Inhibitor
pdb|3CP9|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CP9|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CPB|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Bisamide Inhibitor
pdb|3CPB|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Bisamide Inhibitor
pdb|3CPC|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CPC|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3DTW|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzisoxazole Inhibitor
pdb|3DTW|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzisoxazole Inhibitor
Length = 314
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 62/237 (26%), Positives = 94/237 (39%), Gaps = 42/237 (17%)
Query: 71 KEVDQLPLFSFSSVSTATNKFSDANKLGEGGFGPVYK----GVLKKGD--EIAVKRL-PG 123
+ ++LP + S ++ LG G FG V + G+ K +AVK L G
Sbjct: 1 EHAERLP-YDASKWEFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEG 59
Query: 124 RSGQGLREMKNEASVIAKV-QHKNLVRLLGCCIDKDEKILIY------------------ 164
+ R + +E ++ + H N+V LLG C +++
Sbjct: 60 ATHSEHRALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVITEFCKFGNLSTYLRSKRN 119
Query: 165 EYMPNK--------------SLDFFLFDPTKRMLLDWSANYSSR-LKVSNILLDKDINPK 209
E++P K L + F K M S R L NILL + K
Sbjct: 120 EFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVK 179
Query: 210 ISDFGMARICGGNELQANTSRIVGTYGYMSPEYAIQGIFSIKSDVFSFGVLLLEIVS 266
I DFG+AR + +M+PE +++I+SDV+SFGVLL EI S
Sbjct: 180 ICDFGLARDIXKDPDXVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 236
>pdb|1OMW|A Chain A, Crystal Structure Of The Complex Between G Protein-Coupled
Receptor Kinase 2 And Heterotrimeric G Protein Beta 1
And Gamma 2 Subunits
pdb|1YM7|A Chain A, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|B Chain B, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|C Chain C, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|D Chain D, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|2BCJ|A Chain A, Crystal Structure Of G Protein-coupled Receptor Kinase 2
In Complex With Galpha-q And Gbetagamma Subunits
pdb|3UZS|A Chain A, Structure Of The C13.28 Rna Aptamer Bound To The G
Protein-Coupled Receptor Kinase 2-Heterotrimeric G
Protein Beta 1 And Gamma 2 Subunit Complex
pdb|3UZT|A Chain A, Structure Of The C13.18 Rna Aptamer In Complex With G
Protein-Coupled Receptor Kinase 2
Length = 689
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 34/94 (36%), Positives = 55/94 (58%), Gaps = 11/94 (11%)
Query: 195 LKVSNILLDKDINPKISDFGMARICGGNELQANTSRIVGTYGYMSPEYAIQGI-FSIKSD 253
LK +NILLD+ + +ISD G+A C ++ + + S VGT+GYM+PE +G+ + +D
Sbjct: 318 LKPANILLDEHGHVRISDLGLA--CDFSKKKPHAS--VGTHGYMAPEVLQKGVAYDSSAD 373
Query: 254 VFSFGVLLLEIVSG------KKTTGFYRTDSLTL 281
FS G +L +++ G KT + D +TL
Sbjct: 374 WFSLGCMLFKLLRGHSPFRQHKTKDKHEIDRMTL 407
>pdb|3PSC|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits
pdb|3PVU|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits And A
Selective Kinase Inhibitor (Cmpd101)
pdb|3PVW|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits And A
Selective Kinase Inhibitor (Cmpd103a)
Length = 695
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 34/94 (36%), Positives = 55/94 (58%), Gaps = 11/94 (11%)
Query: 195 LKVSNILLDKDINPKISDFGMARICGGNELQANTSRIVGTYGYMSPEYAIQGI-FSIKSD 253
LK +NILLD+ + +ISD G+A C ++ + + S VGT+GYM+PE +G+ + +D
Sbjct: 318 LKPANILLDEHGHVRISDLGLA--CDFSKKKPHAS--VGTHGYMAPEVLQKGVAYDSSAD 373
Query: 254 VFSFGVLLLEIVSG------KKTTGFYRTDSLTL 281
FS G +L +++ G KT + D +TL
Sbjct: 374 WFSLGCMLFKLLRGHSPFRQHKTKDKHEIDRMTL 407
>pdb|3KRW|A Chain A, Human Grk2 In Complex With Gbetgamma Subunits And Balanol
(Soak)
pdb|3KRX|A Chain A, Human Grk2 In Complex With Gbetgamma Subunits And Balanol
(Co-Crystal)
Length = 688
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 34/94 (36%), Positives = 55/94 (58%), Gaps = 11/94 (11%)
Query: 195 LKVSNILLDKDINPKISDFGMARICGGNELQANTSRIVGTYGYMSPEYAIQGI-FSIKSD 253
LK +NILLD+ + +ISD G+A C ++ + + S VGT+GYM+PE +G+ + +D
Sbjct: 317 LKPANILLDEHGHVRISDLGLA--CDFSKKKPHAS--VGTHGYMAPEVLQKGVAYDSSAD 372
Query: 254 VFSFGVLLLEIVSG------KKTTGFYRTDSLTL 281
FS G +L +++ G KT + D +TL
Sbjct: 373 WFSLGCMLFKLLRGHSPFRQHKTKDKHEIDRMTL 406
>pdb|3A7F|A Chain A, Human Mst3 Kinase
pdb|3A7G|A Chain A, Human Mst3 Kinase
pdb|3A7G|B Chain B, Human Mst3 Kinase
pdb|3A7H|A Chain A, Human Mst3 Kinase In Complex With Atp
pdb|3A7H|B Chain B, Human Mst3 Kinase In Complex With Atp
pdb|3A7I|A Chain A, Human Mst3 Kinase In Complex With Adenine
pdb|3A7J|A Chain A, Human Mst3 Kinase In Complex With Mnadp
Length = 303
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 44/195 (22%), Positives = 93/195 (47%), Gaps = 19/195 (9%)
Query: 91 FSDANKLGEGGFGPVYKGVLKKGDEIAVKRLPG--RSGQGLREMKNEASVIAKVQHKNLV 148
F+ K+G+G FG V+KG+ + ++ ++ + + +++ E +V+++ +
Sbjct: 24 FTKLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVT 83
Query: 149 RLLGCCIDKDEKILIYEYMPNKS-LDFFLFDPT---------KRMLLDWSANYSSR---- 194
+ G + + +I EY+ S LD P + +L +S +
Sbjct: 84 KYYGSYLKDTKLWIIMEYLGGGSALDLLEPGPLDETQIATILREILKGLDYLHSEKKIHR 143
Query: 195 -LKVSNILLDKDINPKISDFGMARICGGNELQANTSRIVGTYGYMSPEYAIQGIFSIKSD 253
+K +N+LL + K++DFG+A +++ N VGT +M+PE Q + K+D
Sbjct: 144 DIKAANVLLSEHGEVKLADFGVAGQLTDTQIKRNX--FVGTPFWMAPEVIKQSAYDSKAD 201
Query: 254 VFSFGVLLLEIVSGK 268
++S G+ +E+ G+
Sbjct: 202 IWSLGITAIELARGE 216
>pdb|1PME|A Chain A, Structure Of Penta Mutant Human Erk2 Map Kinase Complexed
With A Specific Inhibitor Of Human P38 Map Kinase
Length = 380
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 51/207 (24%), Positives = 96/207 (46%), Gaps = 33/207 (15%)
Query: 90 KFSDANKLGEGGFGPV---YKGVLKKGDEIAVKRL-PGRSGQGLREMKNEASVIAKVQHK 145
++++ + +GEG +G V Y V K +A+K++ P + E ++ + +H+
Sbjct: 44 RYTNLSYIGEGAYGMVCSAYDNVNKV--RVAIKKISPFEHQTYCQRTLREIKILLRFRHE 101
Query: 146 NLV---------------------RLLGCCIDKDEKILIYEYMPNKSLDFFLFDPTKRML 184
N++ L+G + K+L +++ N + +FL+ + +
Sbjct: 102 NIIGINDIIRAPTIEQMKDVYLVTHLMGADL---YKLLKTQHLSNDHICYFLYQILRGLK 158
Query: 185 LDWSANYSSR-LKVSNILLDKDINPKISDFGMARICGGNELQAN-TSRIVGTYGYMSPEY 242
SAN R LK SN+LL+ + KI DFG+AR+ + + V T Y +PE
Sbjct: 159 YIHSANVLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEI 218
Query: 243 AIQGIFSIKS-DVFSFGVLLLEIVSGK 268
+ KS D++S G +L E++S +
Sbjct: 219 MLNSKGYTKSIDIWSVGCILAEMLSNR 245
>pdb|4FIE|A Chain A, Full-Length Human Pak4
pdb|4FIE|B Chain B, Full-Length Human Pak4
Length = 423
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 48/192 (25%), Positives = 87/192 (45%), Gaps = 24/192 (12%)
Query: 96 KLGEGGFGPVYKGVLKK-GDEIAVKRLPGRSGQGLREMKNEASVIAKVQHKNLVRLLGCC 154
K+GEG G V ++ G +AVK++ R Q + NE ++ QH+N+V +
Sbjct: 158 KIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSY 217
Query: 155 IDKDEKILIYEYMPNKSLDFFLFDPTKRM-----------------LLDWSANYSSRLKV 197
+ DE ++ E++ +L + RM +L +K
Sbjct: 218 LVGDELWVVMEFLEGGALTDIVTH--TRMNEEQIAAVCLAVLQALSVLHAQGVIHRDIKS 275
Query: 198 SNILLDKDINPKISDFGMARICGGNELQANTSR-IVGTYGYMSPEYAIQGIFSIKSDVFS 256
+ILL D K+SDFG C + + +VGT +M+PE + + + D++S
Sbjct: 276 DSILLTHDGRVKLSDFG---FCAQVSKEVPRRKXLVGTPYWMAPELISRLPYGPEVDIWS 332
Query: 257 FGVLLLEIVSGK 268
G++++E+V G+
Sbjct: 333 LGIMVIEMVDGE 344
>pdb|2FH9|A Chain A, Structure And Dimerization Of The Kinase Domain From Yeast
Snf1
Length = 274
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 54/188 (28%), Positives = 89/188 (47%), Gaps = 29/188 (15%)
Query: 97 LGEGGFGPVYKGV-LKKGDEIAVK-----RLPGRSGQGLREMKNEASVIAKVQHKNLVRL 150
LGEG FG V G ++A+K L QG ++ E S + ++H ++++L
Sbjct: 16 LGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQG--RIEREISYLRLLRHPHIIKL 73
Query: 151 LGCCIDKDEKILIYEYMPNKSLDFF-----LFDPTKRMLLDW---SANYSSR-------L 195
KDE I++ EY N+ D+ + + R + Y R L
Sbjct: 74 YDVIKSKDEIIMVIEYAGNELFDYIVQRDKMSEQEARRFFQQIISAVEYCHRHKIVHRDL 133
Query: 196 KVSNILLDKDINPKISDFGMARI-CGGNELQANTSRIVGTYGYMSPEYAIQGIFS-IKSD 253
K N+LLD+ +N KI+DFG++ I GN L+ + G+ Y +PE +++ + D
Sbjct: 134 KPENLLLDEHLNVKIADFGLSNIMTDGNFLKTSC----GSPNYAAPEVISGKLYAGPEVD 189
Query: 254 VFSFGVLL 261
V+S GV+L
Sbjct: 190 VWSCGVIL 197
>pdb|3CKX|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3,
Stk24) In Complex With Staurosporine
Length = 304
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 44/195 (22%), Positives = 93/195 (47%), Gaps = 19/195 (9%)
Query: 91 FSDANKLGEGGFGPVYKGVLKKGDEIAVKRLPG--RSGQGLREMKNEASVIAKVQHKNLV 148
F+ K+G+G FG V+KG+ + ++ ++ + + +++ E +V+++ +
Sbjct: 9 FTKLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVT 68
Query: 149 RLLGCCIDKDEKILIYEYMPNKS-LDFFLFDPT---------KRMLLDWSANYSSR---- 194
+ G + + +I EY+ S LD P + +L +S +
Sbjct: 69 KYYGSYLKDTKLWIIMEYLGGGSALDLLEPGPLDETQIATILREILKGLDYLHSEKKIHR 128
Query: 195 -LKVSNILLDKDINPKISDFGMARICGGNELQANTSRIVGTYGYMSPEYAIQGIFSIKSD 253
+K +N+LL + K++DFG+A +++ N VGT +M+PE Q + K+D
Sbjct: 129 DIKAANVLLSEHGEVKLADFGVAGQLTDTQIKRNX--FVGTPFWMAPEVIKQSAYDSKAD 186
Query: 254 VFSFGVLLLEIVSGK 268
++S G+ +E+ G+
Sbjct: 187 IWSLGITAIELARGE 201
>pdb|2Q0B|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565a Mutation Responsible For
Pfeiffer Syndrome
pdb|2Q0B|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565a Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 56/220 (25%), Positives = 94/220 (42%), Gaps = 42/220 (19%)
Query: 89 NKFSDANKLGEGGFGPVY--------KGVLKKGDEIAVKRLPGRSGQ-GLREMKNEASVI 139
+K + LGEG FG V K K+ +AVK L + + L ++ +E ++
Sbjct: 35 DKLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMM 94
Query: 140 AKV-QHKNLVRLLGCCIDKDEKILIYEYMPNKSLDFFL-----------FD----PTKRM 183
+ +HKN++ LLG C +I Y +L +L +D P ++M
Sbjct: 95 KMIGKHKNIINLLGACTQDGPLYVIVAYASKGNLREYLRARRPPGMEYSYDINRVPEEQM 154
Query: 184 LLD--WSANYS---------------SRLKVSNILLDKDINPKISDFGMARICGGNELQA 226
S Y L N+L+ ++ KI+DFG+AR +
Sbjct: 155 TFKDLVSCTYQLARGMEYLASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYK 214
Query: 227 NTSRIVGTYGYMSPEYAIQGIFSIKSDVFSFGVLLLEIVS 266
T+ +M+PE +++ +SDV+SFGVL+ EI +
Sbjct: 215 KTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 254
>pdb|1VR2|A Chain A, Human Vascular Endothelial Growth Factor Receptor 2 (Kdr)
Kinase Domain
Length = 316
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 64/242 (26%), Positives = 94/242 (38%), Gaps = 49/242 (20%)
Query: 74 DQLPL--------FSFSSVSTATNKFSDANKLGEGGFGPVYK----GVLKKGD--EIAVK 119
D+LPL + S ++ LG G FG V + G+ K +AVK
Sbjct: 4 DELPLDEHCERLPYDASKWEFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVK 63
Query: 120 RL-PGRSGQGLREMKNEASVIAKV-QHKNLVRLLGCCIDKDEKILIY------------- 164
L G + R + +E ++ + H N+V LLG C +++
Sbjct: 64 MLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYL 123
Query: 165 -----EYMPNK--------------SLDFFLFDPTKRMLLDWSANYSSR-LKVSNILLDK 204
E++P K L + F K M S R L NILL +
Sbjct: 124 RSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLSE 183
Query: 205 DINPKISDFGMARICGGNELQANTSRIVGTYGYMSPEYAIQGIFSIKSDVFSFGVLLLEI 264
KI DFG+AR + +M+PE +++I+SDV+SFGVLL EI
Sbjct: 184 KNVVKICDFGLARDIYKDPDXVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEI 243
Query: 265 VS 266
S
Sbjct: 244 FS 245
>pdb|3VNT|A Chain A, Crystal Structure Of The Kinase Domain Of Human Vegfr2
With A [1, 3]thiazolo[5,4-B]pyridine Derivative
Length = 318
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 65/242 (26%), Positives = 95/242 (39%), Gaps = 49/242 (20%)
Query: 74 DQLPL--------FSFSSVSTATNKFSDANKLGEGGFGPVYK----GVLKKGD--EIAVK 119
D+LPL + S ++ LG G FG V + G+ K +AVK
Sbjct: 6 DELPLDEHCERLPYDASKWEFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVK 65
Query: 120 RL-PGRSGQGLREMKNEASVIAKV-QHKNLVRLLGCCIDKDEKILIY------------- 164
L G + R + +E ++ + H N+V LLG C +++
Sbjct: 66 MLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYL 125
Query: 165 -----EYMPNKSL------DF--------FLFDPTKRMLLDWSANYSSR-LKVSNILLDK 204
E++P K DF + F K M S R L NILL +
Sbjct: 126 RSKRNEFVPYKEAPEDLYKDFLTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLSE 185
Query: 205 DINPKISDFGMARICGGNELQANTSRIVGTYGYMSPEYAIQGIFSIKSDVFSFGVLLLEI 264
KI DFG+AR + +M+PE +++I+SDV+SFGVLL EI
Sbjct: 186 KNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEI 245
Query: 265 VS 266
S
Sbjct: 246 FS 247
>pdb|4FSU|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 51/191 (26%), Positives = 88/191 (46%), Gaps = 19/191 (9%)
Query: 97 LGEGGFGPVYKGVLKKGDE-IAVKRLPGRSGQGLRE-MKNEASVIAKVQHKNLVRLLGCC 154
LGEG G V V + +E +AVK + + E +K E + + H+N+V+ G
Sbjct: 14 LGEGAAGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHR 73
Query: 155 IDKDEKILIYEY---------------MPNKSLDFFLFDPTKRMLLDWSANYSSR-LKVS 198
+ + + L EY MP F ++ + R +K
Sbjct: 74 REGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIGITHRDIKPE 133
Query: 199 NILLDKDINPKISDFGMARICGGNELQANTSRIVGTYGYMSPEYAIQGIFSIKS-DVFSF 257
N+LLD+ N KISDFG+A + N + +++ GT Y++PE + F + DV+S
Sbjct: 134 NLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSC 193
Query: 258 GVLLLEIVSGK 268
G++L +++G+
Sbjct: 194 GIVLTAMLAGE 204
>pdb|4FIF|A Chain A, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIF|B Chain B, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIG|A Chain A, Catalytic Domain Of Human Pak4
pdb|4FIG|B Chain B, Catalytic Domain Of Human Pak4
pdb|4FIH|A Chain A, Catalytic Domain Of Human Pak4 With Qkftglprqw Peptide
pdb|4FII|A Chain A, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIJ|A Chain A, Catalytic Domain Of Human Pak4
Length = 346
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 48/192 (25%), Positives = 87/192 (45%), Gaps = 24/192 (12%)
Query: 96 KLGEGGFGPVYKGVLKK-GDEIAVKRLPGRSGQGLREMKNEASVIAKVQHKNLVRLLGCC 154
K+GEG G V ++ G +AVK++ R Q + NE ++ QH+N+V +
Sbjct: 81 KIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSY 140
Query: 155 IDKDEKILIYEYMPNKSLDFFLFDPTKRM-----------------LLDWSANYSSRLKV 197
+ DE ++ E++ +L + RM +L +K
Sbjct: 141 LVGDELWVVMEFLEGGALTDIVTH--TRMNEEQIAAVCLAVLQALSVLHAQGVIHRDIKS 198
Query: 198 SNILLDKDINPKISDFGMARICGGNELQANTSR-IVGTYGYMSPEYAIQGIFSIKSDVFS 256
+ILL D K+SDFG C + + +VGT +M+PE + + + D++S
Sbjct: 199 DSILLTHDGRVKLSDFG---FCAQVSKEVPRRKXLVGTPYWMAPELISRLPYGPEVDIWS 255
Query: 257 FGVLLLEIVSGK 268
G++++E+V G+
Sbjct: 256 LGIMVIEMVDGE 267
>pdb|2XIR|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Pf-00337210 (N,2-Dimethyl-6-(7-(2-Morpholinoethoxy)
Quinolin-4-Yloxy)benzofuran-3-Carboxamide)
pdb|4AG8|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Axitinib (Ag-013736)
(N-Methyl-2-(3-((E)-2-Pyridin-2-
Yl-Vinyl)-1h-Indazol-6-Ylsulfanyl)-Benzamide)
Length = 316
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 64/242 (26%), Positives = 94/242 (38%), Gaps = 49/242 (20%)
Query: 74 DQLPL--------FSFSSVSTATNKFSDANKLGEGGFGPVYK----GVLKKGD--EIAVK 119
D+LPL + S ++ LG G FG V + G+ K +AVK
Sbjct: 4 DELPLDEHCERLPYDASKWEFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVK 63
Query: 120 RL-PGRSGQGLREMKNEASVIAKV-QHKNLVRLLGCCIDKDEKILIY------------- 164
L G + R + +E ++ + H N+V LLG C +++
Sbjct: 64 MLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYL 123
Query: 165 -----EYMPNK--------------SLDFFLFDPTKRMLLDWSANYSSR-LKVSNILLDK 204
E++P K L + F K M S R L NILL +
Sbjct: 124 RSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLSE 183
Query: 205 DINPKISDFGMARICGGNELQANTSRIVGTYGYMSPEYAIQGIFSIKSDVFSFGVLLLEI 264
KI DFG+AR + +M+PE +++I+SDV+SFGVLL EI
Sbjct: 184 KNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEI 243
Query: 265 VS 266
S
Sbjct: 244 FS 245
>pdb|3QUP|A Chain A, Inhibitor Bound Structure Of The Kinase Domain Of The
Murine Receptor Tyrosine Kinase Tyro3 (Sky)
Length = 323
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 54/223 (24%), Positives = 101/223 (45%), Gaps = 38/223 (17%)
Query: 84 VSTATNKFSDANKLGEGGFGPVYKGVLKKGD----EIAVKRLPGR--SGQGLREMKNEAS 137
V +F+ LG+G FG V + LK+ D ++AVK L + + E EA+
Sbjct: 18 VLIPEQQFTLGRMLGKGEFGSVREAQLKQEDGSFVKVAVKMLKADIIASSDIEEFLREAA 77
Query: 138 VIAKVQHKNLVRLLGCCIDKDEK------ILIYEYMPNKSLDFFLFD----------PTK 181
+ + H ++ +L+G + K ++I +M + L FL P +
Sbjct: 78 CMKEFDHPHVAKLVGVSLRSRAKGRLPIPMVILPFMKHGDLHAFLLASRIGENPFNLPLQ 137
Query: 182 ---RMLLDW--------SANYSSR-LKVSNILLDKDINPKISDFGMAR--ICGGNELQAN 227
R ++D S N+ R L N +L +D+ ++DFG++R G Q
Sbjct: 138 TLVRFMVDIACGMEYLSSRNFIHRDLAARNCMLAEDMTVCVADFGLSRKIYSGDYYRQGC 197
Query: 228 TSRIVGTYGYMSPEYAIQGIFSIKSDVFSFGVLLLEIVSGKKT 270
S++ +++ E ++++ SDV++FGV + EI++ +T
Sbjct: 198 ASKL--PVKWLALESLADNLYTVHSDVWAFGVTMWEIMTRGQT 238
>pdb|4A4X|A Chain A, Nek2-Ede Bound To Cct248662
Length = 279
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 31/72 (43%), Positives = 43/72 (59%), Gaps = 2/72 (2%)
Query: 195 LKVSNILLDKDINPKISDFGMARICGGNELQANTSRIVGTYGYMSPEYAIQGIFSIKSDV 254
LK +N+ LD N K+ DFG+ARI +E A VGT YMSPE + ++ KSD+
Sbjct: 142 LKPANVFLDGKQNVKLGDFGLARILNHDEDFA--KEFVGTPYYMSPEQMNRMSYNEKSDI 199
Query: 255 FSFGVLLLEIVS 266
+S G LL E+ +
Sbjct: 200 WSLGCLLYELCA 211
>pdb|1T46|A Chain A, Structural Basis For The Autoinhibition And Sti-571
Inhibition Of C-kit Tyrosine Kinase
Length = 313
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 61/225 (27%), Positives = 92/225 (40%), Gaps = 52/225 (23%)
Query: 89 NKFSDANKLGEGGFGPVYKGV---LKKGDE---IAVKRLPGRSGQGLRE-MKNEASVIAK 141
N+ S LG G FG V + L K D +AVK L + RE + +E V++
Sbjct: 23 NRLSFGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSY 82
Query: 142 V-QHKNLVRLLGCCIDKDEKILIYEYMPNKSLDFFL------------------------ 176
+ H N+V LLG C ++I EY L FL
Sbjct: 83 LGNHMNIVNLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELAL 142
Query: 177 ---------FDPTKRMLLDWSANYSSR-LKVSNILLDKDINPKISDFGMARICGGNELQA 226
+ K M S N R L NILL KI DFG+AR +++
Sbjct: 143 DLEDLLSFSYQVAKGMAFLASKNCIHRDLAARNILLTHGRITKICDFGLAR-----DIKN 197
Query: 227 NTSRIVGTYG-----YMSPEYAIQGIFSIKSDVFSFGVLLLEIVS 266
+++ +V +M+PE +++ +SDV+S+G+ L E+ S
Sbjct: 198 DSNYVVKGNARLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFS 242
>pdb|3G0F|A Chain A, Kit Kinase Domain Mutant D816h In Complex With Sunitinib
pdb|3G0F|B Chain B, Kit Kinase Domain Mutant D816h In Complex With Sunitinib
Length = 336
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 62/222 (27%), Positives = 89/222 (40%), Gaps = 46/222 (20%)
Query: 89 NKFSDANKLGEGGFGPVYKGV---LKKGDE---IAVKRLPGRSGQGLRE-MKNEASVIAK 141
N+ S LG G FG V + L K D +AVK L + RE + +E V++
Sbjct: 46 NRLSFGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSY 105
Query: 142 V-QHKNLVRLLGCCIDKDEKILIYEYMPNKSLDFFL------------------------ 176
+ H N+V LLG C ++I EY L FL
Sbjct: 106 LGNHMNIVNLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELAL 165
Query: 177 ---------FDPTKRMLLDWSANYSSR-LKVSNILLDKDINPKISDFGMARIC--GGNEL 224
+ K M S N R L NILL KI DFG+AR N +
Sbjct: 166 DLEDLLSFSYQVAKGMAFLASKNCIHRDLAARNILLTHGRITKICDFGLARHIKNDSNYV 225
Query: 225 QANTSRIVGTYGYMSPEYAIQGIFSIKSDVFSFGVLLLEIVS 266
+R+ +M+PE +++ +SDV+S+G+ L E+ S
Sbjct: 226 VKGNARL--PVKWMAPESIFNCVYTFESDVWSYGIFLWELFS 265
>pdb|2W5A|A Chain A, Human Nek2 Kinase Adp-Bound
pdb|2WQO|A Chain A, Structure Of Nek2 Bound To The Aminopyridine Cct241950
pdb|2XK3|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 35
pdb|2XK4|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 17
pdb|2XK6|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 36
pdb|2XK7|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 23
pdb|2XK8|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 15
pdb|2XKC|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 14
pdb|2XKD|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 12
pdb|2XKF|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 2
pdb|2XKE|A Chain A, Structure Of Nek2 Bound To Aminipyrazine Compound 5
pdb|2XNM|A Chain A, Structure Of Nek2 Bound To Cct
pdb|2XNN|A Chain A, Structure Of Nek2 Bound To Cct242430
pdb|2XNO|A Chain A, Structure Of Nek2 Bound To Cct243779
pdb|2XNP|A Chain A, Structure Of Nek2 Bound To Cct244858
pdb|4AFE|A Chain A, Nek2 Bound To Hybrid Compound 21
Length = 279
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 31/72 (43%), Positives = 43/72 (59%), Gaps = 2/72 (2%)
Query: 195 LKVSNILLDKDINPKISDFGMARICGGNELQANTSRIVGTYGYMSPEYAIQGIFSIKSDV 254
LK +N+ LD N K+ DFG+ARI + A T VGT YMSPE + ++ KSD+
Sbjct: 142 LKPANVFLDGKQNVKLGDFGLARILNHDTSFAKT--FVGTPYYMSPEQMNRMSYNEKSDI 199
Query: 255 FSFGVLLLEIVS 266
+S G LL E+ +
Sbjct: 200 WSLGCLLYELCA 211
>pdb|2UV2|A Chain A, Crystal Structure Of Human Ste20-Like Kinase Bound To
4-(4-(
5-Cyclopropyl-1h-Pyrazol-3-Ylamino)-Quinazolin-2-
Ylamino)- Phenyl)-Acetonitrile
Length = 287
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 50/193 (25%), Positives = 89/193 (46%), Gaps = 27/193 (13%)
Query: 97 LGE-GGFGPVYKGVLKKGDEIAV-KRLPGRSGQGLREMKNEASVIAKVQHKNLVRLLGCC 154
+GE G FG VYK K+ +A K + +S + L + E ++A H N+V+LL
Sbjct: 17 IGELGDFGKVYKAQNKETSVLAAAKVIDTKSEEELEDYMVEIDILASCDHPNIVKLLDAF 76
Query: 155 IDKDEKILIYEYMPNKSLDFFLFDPTK-----------RMLLDWSANY-------SSRLK 196
++ ++ E+ ++D + + + + LD + NY LK
Sbjct: 77 YYENNLWILIEFCAGGAVDAVMLELERPLTESQIQVVCKQTLD-ALNYLHDNKIIHRDLK 135
Query: 197 VSNILLDKDINPKISDFGMARICGGNELQANTSRIVGTYGYMSPEYAI-----QGIFSIK 251
NIL D + K++DFG++ +Q S +GT +M+PE + + K
Sbjct: 136 AGNILFTLDGDIKLADFGVSAKNTRTXIQRRDS-FIGTPYWMAPEVVMCETSKDRPYDYK 194
Query: 252 SDVFSFGVLLLEI 264
+DV+S G+ L+E+
Sbjct: 195 ADVWSLGITLIEM 207
>pdb|3TEI|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4H3P|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4H3P|D Chain D, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 51/204 (25%), Positives = 96/204 (47%), Gaps = 27/204 (13%)
Query: 90 KFSDANKLGEGGFGPV---YKGVLKKGDEIAVKRL-PGRSGQGLREMKNEASVIAKVQHK 145
++++ + +GEG +G V Y V K +A+K++ P + E ++ +H+
Sbjct: 26 RYTNLSYIGEGAYGMVCSAYDNVNKV--RVAIKKISPFEHQTYCQRTLREIKILLAFRHE 83
Query: 146 NLV------------RLLGCCIDKD------EKILIYEYMPNKSLDFFLFDPTKRMLLDW 187
N++ ++ I +D K+L +++ N + +FL+ + +
Sbjct: 84 NIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRGLKYIH 143
Query: 188 SANYSSR-LKVSNILLDKDINPKISDFGMARICGGNELQAN-TSRIVGTYGYMSPEYAIQ 245
SAN R LK SN+LL+ + KI DFG+AR+ + + V T Y +PE +
Sbjct: 144 SANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLN 203
Query: 246 GIFSIKS-DVFSFGVLLLEIVSGK 268
KS D++S G +L E++S +
Sbjct: 204 SKGYTKSIDIWSVGCILAEMLSNR 227
>pdb|2PY3|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565g Mutation Responsible For
Pfeiffer Syndrome
pdb|2PY3|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565g Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 56/220 (25%), Positives = 94/220 (42%), Gaps = 42/220 (19%)
Query: 89 NKFSDANKLGEGGFGPVY--------KGVLKKGDEIAVKRLPGRSGQ-GLREMKNEASVI 139
+K + LGEG FG V K K+ +AVK L + + L ++ +E ++
Sbjct: 35 DKLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMM 94
Query: 140 AKV-QHKNLVRLLGCCIDKDEKILIYEYMPNKSLDFFL-----------FD----PTKRM 183
+ +HKN++ LLG C +I Y +L +L +D P ++M
Sbjct: 95 KMIGKHKNIINLLGACTQDGPLYVIVGYASKGNLREYLRARRPPGMEYSYDINRVPEEQM 154
Query: 184 LLD--WSANYS---------------SRLKVSNILLDKDINPKISDFGMARICGGNELQA 226
S Y L N+L+ ++ KI+DFG+AR +
Sbjct: 155 TFKDLVSCTYQLARGMEYLASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYK 214
Query: 227 NTSRIVGTYGYMSPEYAIQGIFSIKSDVFSFGVLLLEIVS 266
T+ +M+PE +++ +SDV+SFGVL+ EI +
Sbjct: 215 KTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 254
>pdb|1UNG|A Chain A, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNG|B Chain B, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNH|A Chain A, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNH|B Chain B, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNL|A Chain A, Structural Mechanism For The Inhibition Of Cd5-P25 From
The Roscovitine, Aloisine And Indirubin.
pdb|1UNL|B Chain B, Structural Mechanism For The Inhibition Of Cd5-P25 From
The Roscovitine, Aloisine And Indirubin.
pdb|3O0G|A Chain A, Crystal Structure Of Cdk5:p25 In Complex With An Atp
Analogue
pdb|3O0G|B Chain B, Crystal Structure Of Cdk5:p25 In Complex With An Atp
Analogue
Length = 292
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 54/205 (26%), Positives = 97/205 (47%), Gaps = 30/205 (14%)
Query: 89 NKFSDANKLGEGGFGPVYKGVLKKGDEI-AVKRL------PGRSGQGLREMKNEASVIAK 141
K+ K+GEG +G V+K ++ EI A+KR+ G LRE+ ++ +
Sbjct: 2 QKYEKLEKIGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREI----CLLKE 57
Query: 142 VQHKNLVRLLGCCIDKDEKILIYEYMP----------NKSLD-----FFLFDPTKRMLLD 186
++HKN+VRL + L++E+ N LD FLF K +
Sbjct: 58 LKHKNIVRLHDVLHSDKKLTLVFEFCDQDLKKYFDSCNGDLDPEIVKSFLFQLLKGLGFC 117
Query: 187 WSANYSSR-LKVSNILLDKDINPKISDFGMARICGGNELQANTSRIVGTYGYMSPEYAIQ 245
S N R LK N+L++++ K+++FG+AR G ++ ++ +V T Y P+
Sbjct: 118 HSRNVLHRDLKPQNLLINRNGELKLANFGLAR-AFGIPVRCYSAEVV-TLWYRPPDVLFG 175
Query: 246 G-IFSIKSDVFSFGVLLLEIVSGKK 269
++S D++S G + E+ + +
Sbjct: 176 AKLYSTSIDMWSAGCIFAELANAGR 200
>pdb|3O71|A Chain A, Crystal Structure Of Erk2DCC PEPTIDE COMPLEX
Length = 358
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 50/204 (24%), Positives = 97/204 (47%), Gaps = 27/204 (13%)
Query: 90 KFSDANKLGEGGFGPV---YKGVLKKGDEIAVKRL-PGRSGQGLREMKNEASVIAKVQHK 145
++++ + +GEG +G V Y + K +A+K++ P + E ++ + +H+
Sbjct: 22 RYTNLSYIGEGAYGMVCSAYDNLNKV--RVAIKKISPFEHQTYCQRTLREIKILLRFRHE 79
Query: 146 NLV------------RLLGCCIDKD------EKILIYEYMPNKSLDFFLFDPTKRMLLDW 187
N++ ++ I +D K+L +++ N + +FL+ + +
Sbjct: 80 NIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRGLKYIH 139
Query: 188 SANYSSR-LKVSNILLDKDINPKISDFGMARICGGNELQAN-TSRIVGTYGYMSPEYAIQ 245
SAN R LK SN+LL+ + KI DFG+AR+ + + V T Y +PE +
Sbjct: 140 SANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLN 199
Query: 246 GIFSIKS-DVFSFGVLLLEIVSGK 268
KS D++S G +L E++S +
Sbjct: 200 SKGYTKSIDIWSVGCILAEMLSNR 223
>pdb|1PKG|A Chain A, Structure Of A C-kit Kinase Product Complex
pdb|1PKG|B Chain B, Structure Of A C-kit Kinase Product Complex
Length = 329
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 61/225 (27%), Positives = 92/225 (40%), Gaps = 52/225 (23%)
Query: 89 NKFSDANKLGEGGFGPVYKGV---LKKGDE---IAVKRLPGRSGQGLRE-MKNEASVIAK 141
N+ S LG G FG V + L K D +AVK L + RE + +E V++
Sbjct: 39 NRLSFGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSY 98
Query: 142 V-QHKNLVRLLGCCIDKDEKILIYEYMPNKSLDFFL------------------------ 176
+ H N+V LLG C ++I EY L FL
Sbjct: 99 LGNHMNIVNLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELAL 158
Query: 177 ---------FDPTKRMLLDWSANYSSR-LKVSNILLDKDINPKISDFGMARICGGNELQA 226
+ K M S N R L NILL KI DFG+AR +++
Sbjct: 159 DLEDLLSFSYQVAKGMAFLASKNCIHRDLAARNILLTHGRITKICDFGLAR-----DIKN 213
Query: 227 NTSRIVGTYG-----YMSPEYAIQGIFSIKSDVFSFGVLLLEIVS 266
+++ +V +M+PE +++ +SDV+S+G+ L E+ S
Sbjct: 214 DSNYVVKGNARLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFS 258
>pdb|3R63|A Chain A, Structure Of Erk2 (Spe) Mutant (S246e)
Length = 358
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 50/204 (24%), Positives = 97/204 (47%), Gaps = 27/204 (13%)
Query: 90 KFSDANKLGEGGFGPV---YKGVLKKGDEIAVKRL-PGRSGQGLREMKNEASVIAKVQHK 145
++++ + +GEG +G V Y + K +A+K++ P + E ++ + +H+
Sbjct: 22 RYTNLSYIGEGAYGMVCSAYDNLNKV--RVAIKKISPFEHQTYCQRTLREIKILLRFRHE 79
Query: 146 NLV------------RLLGCCIDKD------EKILIYEYMPNKSLDFFLFDPTKRMLLDW 187
N++ ++ I +D K+L +++ N + +FL+ + +
Sbjct: 80 NIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRGLKYIH 139
Query: 188 SANYSSR-LKVSNILLDKDINPKISDFGMARICGGNELQAN-TSRIVGTYGYMSPEYAIQ 245
SAN R LK SN+LL+ + KI DFG+AR+ + + V T Y +PE +
Sbjct: 140 SANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLN 199
Query: 246 GIFSIKS-DVFSFGVLLLEIVSGK 268
KS D++S G +L E++S +
Sbjct: 200 SKGYTKSIDIWSVGCILAEMLSNR 223
>pdb|3EWH|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridyl-Pyrimidine Benzimidazole Inhibitor
Length = 314
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 62/237 (26%), Positives = 94/237 (39%), Gaps = 42/237 (17%)
Query: 71 KEVDQLPLFSFSSVSTATNKFSDANKLGEGGFGPVYK----GVLKKGD--EIAVKRL-PG 123
+ ++LP + S ++ LG G FG V + G+ K +AVK L G
Sbjct: 1 EHAERLP-YDASKWEFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEG 59
Query: 124 RSGQGLREMKNEASVIAKV-QHKNLVRLLGCCIDKDEKILIY------------------ 164
+ R + +E ++ + H N+V LLG C +++
Sbjct: 60 ATHSEHRALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVITEFCKFGNLSTYLRSKRN 119
Query: 165 EYMPNK--------------SLDFFLFDPTKRMLLDWSANYSSR-LKVSNILLDKDINPK 209
E++P K L + F K M S R L NILL + K
Sbjct: 120 EFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVK 179
Query: 210 ISDFGMARICGGNELQANTSRIVGTYGYMSPEYAIQGIFSIKSDVFSFGVLLLEIVS 266
I DFG+AR + +M+PE +++I+SDV+SFGVLL EI S
Sbjct: 180 ICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 236
>pdb|1T45|A Chain A, Structural Basis For The Autoinhibition And Sti-571
Inhibition Of C- Kit Tyrosine Kinase
Length = 331
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 61/225 (27%), Positives = 92/225 (40%), Gaps = 52/225 (23%)
Query: 89 NKFSDANKLGEGGFGPVYKGV---LKKGDE---IAVKRLPGRSGQGLRE-MKNEASVIAK 141
N+ S LG G FG V + L K D +AVK L + RE + +E V++
Sbjct: 41 NRLSFGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSY 100
Query: 142 V-QHKNLVRLLGCCIDKDEKILIYEYMPNKSLDFFL------------------------ 176
+ H N+V LLG C ++I EY L FL
Sbjct: 101 LGNHMNIVNLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELAL 160
Query: 177 ---------FDPTKRMLLDWSANYSSR-LKVSNILLDKDINPKISDFGMARICGGNELQA 226
+ K M S N R L NILL KI DFG+AR +++
Sbjct: 161 DLEDLLSFSYQVAKGMAFLASKNCIHRDLAARNILLTHGRITKICDFGLAR-----DIKN 215
Query: 227 NTSRIVGTYG-----YMSPEYAIQGIFSIKSDVFSFGVLLLEIVS 266
+++ +V +M+PE +++ +SDV+S+G+ L E+ S
Sbjct: 216 DSNYVVKGNARLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFS 260
>pdb|3U6J|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyrazolone Inhibitor
Length = 314
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 62/237 (26%), Positives = 94/237 (39%), Gaps = 42/237 (17%)
Query: 71 KEVDQLPLFSFSSVSTATNKFSDANKLGEGGFGPVYK----GVLKKGD--EIAVKRL-PG 123
+ ++LP + S ++ LG G FG V + G+ K +AVK L G
Sbjct: 1 EHCERLP-YDASKWEFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEG 59
Query: 124 RSGQGLREMKNEASVIAKV-QHKNLVRLLGCCIDKDEKILIY------------------ 164
+ R + +E ++ + H N+V LLG C +++
Sbjct: 60 ATHSEHRALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVITEFCKFGNLSTYLRSKRN 119
Query: 165 EYMPNK--------------SLDFFLFDPTKRMLLDWSANYSSR-LKVSNILLDKDINPK 209
E++P K L + F K M S R L NILL + K
Sbjct: 120 EFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVK 179
Query: 210 ISDFGMARICGGNELQANTSRIVGTYGYMSPEYAIQGIFSIKSDVFSFGVLLLEIVS 266
I DFG+AR + +M+PE +++I+SDV+SFGVLL EI S
Sbjct: 180 ICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 236
>pdb|3ZU7|A Chain A, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Map Kinase Erk2
Length = 365
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 50/204 (24%), Positives = 97/204 (47%), Gaps = 27/204 (13%)
Query: 90 KFSDANKLGEGGFGPV---YKGVLKKGDEIAVKRL-PGRSGQGLREMKNEASVIAKVQHK 145
++++ + +GEG +G V Y + K +A+K++ P + E ++ + +H+
Sbjct: 29 RYTNLSYIGEGAYGMVCSAYDNLNKV--RVAIKKISPFEHQTYCQRTLREIKILLRFRHE 86
Query: 146 NLV------------RLLGCCIDKD------EKILIYEYMPNKSLDFFLFDPTKRMLLDW 187
N++ ++ I +D K+L +++ N + +FL+ + +
Sbjct: 87 NIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRGLKYIH 146
Query: 188 SANYSSR-LKVSNILLDKDINPKISDFGMARICGGNELQAN-TSRIVGTYGYMSPEYAIQ 245
SAN R LK SN+LL+ + KI DFG+AR+ + + V T Y +PE +
Sbjct: 147 SANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLN 206
Query: 246 GIFSIKS-DVFSFGVLLLEIVSGK 268
KS D++S G +L E++S +
Sbjct: 207 SKGYTKSIDIWSVGCILAEMLSNR 230
>pdb|2Z7L|A Chain A, Unphosphorylated Mitogen Activated Protein Kinase Erk2 In
Complex With
(4-{[5-Carbamoyl-4-(3-Methylanilino)pyrimidin
2-Yl]amino}phenyl)acetic Acid
Length = 366
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 50/204 (24%), Positives = 97/204 (47%), Gaps = 27/204 (13%)
Query: 90 KFSDANKLGEGGFGPV---YKGVLKKGDEIAVKRL-PGRSGQGLREMKNEASVIAKVQHK 145
++++ + +GEG +G V Y + K +A+K++ P + E ++ + +H+
Sbjct: 30 RYTNLSYIGEGAYGMVCSAYDNLNKV--RVAIKKISPFEHQTYCQRTLREIKILLRFRHE 87
Query: 146 NLV------------RLLGCCIDKD------EKILIYEYMPNKSLDFFLFDPTKRMLLDW 187
N++ ++ I +D K+L +++ N + +FL+ + +
Sbjct: 88 NIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRGLKYIH 147
Query: 188 SANYSSR-LKVSNILLDKDINPKISDFGMARICGGNELQAN-TSRIVGTYGYMSPEYAIQ 245
SAN R LK SN+LL+ + KI DFG+AR+ + + V T Y +PE +
Sbjct: 148 SANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLN 207
Query: 246 GIFSIKS-DVFSFGVLLLEIVSGK 268
KS D++S G +L E++S +
Sbjct: 208 SKGYTKSIDIWSVGCILAEMLSNR 231
>pdb|3C9W|A Chain A, Crystal Structure Of Erk-2 With Hypothemycin Covalently
Bound
pdb|3C9W|B Chain B, Crystal Structure Of Erk-2 With Hypothemycin Covalently
Bound
Length = 357
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 50/204 (24%), Positives = 97/204 (47%), Gaps = 27/204 (13%)
Query: 90 KFSDANKLGEGGFGPV---YKGVLKKGDEIAVKRL-PGRSGQGLREMKNEASVIAKVQHK 145
++++ + +GEG +G V Y + K +A+K++ P + E ++ + +H+
Sbjct: 21 RYTNLSYIGEGAYGMVCSAYDNLNKV--RVAIKKISPFEHQTYCQRTLREIKILLRFRHE 78
Query: 146 NLV------------RLLGCCIDKD------EKILIYEYMPNKSLDFFLFDPTKRMLLDW 187
N++ ++ I +D K+L +++ N + +FL+ + +
Sbjct: 79 NIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRGLKYIH 138
Query: 188 SANYSSR-LKVSNILLDKDINPKISDFGMARICGGNELQAN-TSRIVGTYGYMSPEYAIQ 245
SAN R LK SN+LL+ + KI DFG+AR+ + + V T Y +PE +
Sbjct: 139 SANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLN 198
Query: 246 GIFSIKS-DVFSFGVLLLEIVSGK 268
KS D++S G +L E++S +
Sbjct: 199 SKGYTKSIDIWSVGCILAEMLSNR 222
>pdb|2FYS|B Chain B, Crystal Structure Of Erk2 Complex With Kim Peptide Derived
From Mkp3
pdb|2FYS|A Chain A, Crystal Structure Of Erk2 Complex With Kim Peptide Derived
From Mkp3
pdb|1ERK|A Chain A, Structure Of Signal-Regulated Kinase
pdb|3ERK|A Chain A, The Complex Structure Of The Map Kinase Erk2SB220025
pdb|4ERK|A Chain A, The Complex Structure Of The Map Kinase Erk2OLOMOUCINE
pdb|3QYI|A Chain A, Map Kinase Erk2 Complexed With
1,1-Dioxo-2,3-Dihydrothiophen-3-Yl Benzenesulfonate
Length = 364
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 50/204 (24%), Positives = 97/204 (47%), Gaps = 27/204 (13%)
Query: 90 KFSDANKLGEGGFGPV---YKGVLKKGDEIAVKRL-PGRSGQGLREMKNEASVIAKVQHK 145
++++ + +GEG +G V Y + K +A+K++ P + E ++ + +H+
Sbjct: 28 RYTNLSYIGEGAYGMVCSAYDNLNKV--RVAIKKISPFEHQTYCQRTLREIKILLRFRHE 85
Query: 146 NLV------------RLLGCCIDKD------EKILIYEYMPNKSLDFFLFDPTKRMLLDW 187
N++ ++ I +D K+L +++ N + +FL+ + +
Sbjct: 86 NIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRGLKYIH 145
Query: 188 SANYSSR-LKVSNILLDKDINPKISDFGMARICGGNELQAN-TSRIVGTYGYMSPEYAIQ 245
SAN R LK SN+LL+ + KI DFG+AR+ + + V T Y +PE +
Sbjct: 146 SANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLN 205
Query: 246 GIFSIKS-DVFSFGVLLLEIVSGK 268
KS D++S G +L E++S +
Sbjct: 206 SKGYTKSIDIWSVGCILAEMLSNR 229
>pdb|3QYW|A Chain A, Crystal Structure Of Erk2 In Complex With An Inhibitor
pdb|3QYZ|A Chain A, Crystal Structure Of Erk2 In Complex With An Inhibitor
pdb|4GT3|A Chain A, Atp-Bound Form Of The Erk2 Kinase
pdb|4GVA|A Chain A, Adp-Bound Form Of The Erk2 Kinase
Length = 364
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 50/204 (24%), Positives = 97/204 (47%), Gaps = 27/204 (13%)
Query: 90 KFSDANKLGEGGFGPV---YKGVLKKGDEIAVKRL-PGRSGQGLREMKNEASVIAKVQHK 145
++++ + +GEG +G V Y + K +A+K++ P + E ++ + +H+
Sbjct: 28 RYTNLSYIGEGAYGMVCSAYDNLNKV--RVAIKKISPFEHQTYCQRTLREIKILLRFRHE 85
Query: 146 NLV------------RLLGCCIDKD------EKILIYEYMPNKSLDFFLFDPTKRMLLDW 187
N++ ++ I +D K+L +++ N + +FL+ + +
Sbjct: 86 NIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRGLKYIH 145
Query: 188 SANYSSR-LKVSNILLDKDINPKISDFGMARICGGNELQAN-TSRIVGTYGYMSPEYAIQ 245
SAN R LK SN+LL+ + KI DFG+AR+ + + V T Y +PE +
Sbjct: 146 SANVLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLN 205
Query: 246 GIFSIKS-DVFSFGVLLLEIVSGK 268
KS D++S G +L E++S +
Sbjct: 206 SKGYTKSIDIWSVGCILAEMLSNR 229
>pdb|3G0E|A Chain A, Kit Kinase Domain In Complex With Sunitinib
Length = 336
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 61/225 (27%), Positives = 92/225 (40%), Gaps = 52/225 (23%)
Query: 89 NKFSDANKLGEGGFGPVYKGV---LKKGDE---IAVKRLPGRSGQGLRE-MKNEASVIAK 141
N+ S LG G FG V + L K D +AVK L + RE + +E V++
Sbjct: 46 NRLSFGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSY 105
Query: 142 V-QHKNLVRLLGCCIDKDEKILIYEYMPNKSLDFFL------------------------ 176
+ H N+V LLG C ++I EY L FL
Sbjct: 106 LGNHMNIVNLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELAL 165
Query: 177 ---------FDPTKRMLLDWSANYSSR-LKVSNILLDKDINPKISDFGMARICGGNELQA 226
+ K M S N R L NILL KI DFG+AR +++
Sbjct: 166 DLEDLLSFSYQVAKGMAFLASKNCIHRDLAARNILLTHGRITKICDFGLAR-----DIKN 220
Query: 227 NTSRIVGTYG-----YMSPEYAIQGIFSIKSDVFSFGVLLLEIVS 266
+++ +V +M+PE +++ +SDV+S+G+ L E+ S
Sbjct: 221 DSNYVVKGNARLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFS 265
>pdb|2GPH|A Chain A, Docking Motif Interactions In The Map Kinase Erk2
Length = 364
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 50/204 (24%), Positives = 97/204 (47%), Gaps = 27/204 (13%)
Query: 90 KFSDANKLGEGGFGPV---YKGVLKKGDEIAVKRL-PGRSGQGLREMKNEASVIAKVQHK 145
++++ + +GEG +G V Y + K +A+K++ P + E ++ + +H+
Sbjct: 28 RYTNLSYIGEGAYGMVCSAYDNLNKV--RVAIKKISPFEHQTYCQRTLREIKILLRFRHE 85
Query: 146 NLV------------RLLGCCIDKD------EKILIYEYMPNKSLDFFLFDPTKRMLLDW 187
N++ ++ I +D K+L +++ N + +FL+ + +
Sbjct: 86 NIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKCQHLSNDHICYFLYQILRGLKYIH 145
Query: 188 SANYSSR-LKVSNILLDKDINPKISDFGMARICGGNELQAN-TSRIVGTYGYMSPEYAIQ 245
SAN R LK SN+LL+ + KI DFG+AR+ + + V T Y +PE +
Sbjct: 146 SANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLN 205
Query: 246 GIFSIKS-DVFSFGVLLLEIVSGK 268
KS D++S G +L E++S +
Sbjct: 206 SKGYTKSIDIWSVGCILAEMLSNR 229
>pdb|4GSB|A Chain A, Monoclinic Crystal Form Of The Apo-Erk2
Length = 364
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 50/204 (24%), Positives = 97/204 (47%), Gaps = 27/204 (13%)
Query: 90 KFSDANKLGEGGFGPV---YKGVLKKGDEIAVKRL-PGRSGQGLREMKNEASVIAKVQHK 145
++++ + +GEG +G V Y + K +A+K++ P + E ++ + +H+
Sbjct: 28 RYTNLSYIGEGAYGMVCSAYDNLNKV--RVAIKKISPFEHQTYXQRTLREIKILLRFRHE 85
Query: 146 NLV------------RLLGCCIDKD------EKILIYEYMPNKSLDFFLFDPTKRMLLDW 187
N++ ++ I +D K+L +++ N + +FL+ + +
Sbjct: 86 NIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRGLKYIH 145
Query: 188 SANYSSR-LKVSNILLDKDINPKISDFGMARICGGNELQAN-TSRIVGTYGYMSPEYAIQ 245
SAN R LK SN+LL+ + KI DFG+AR+ + + V T Y +PE +
Sbjct: 146 SANVLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLN 205
Query: 246 GIFSIKS-DVFSFGVLLLEIVSGK 268
KS D++S G +L E++S +
Sbjct: 206 SKGYTKSIDIWSVGCILAEMLSNR 229
>pdb|3S95|A Chain A, Crystal Structure Of The Human Limk1 Kinase Domain In
Complex With Staurosporine
pdb|3S95|B Chain B, Crystal Structure Of The Human Limk1 Kinase Domain In
Complex With Staurosporine
Length = 310
Score = 52.8 bits (125), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 56/201 (27%), Positives = 89/201 (44%), Gaps = 32/201 (15%)
Query: 97 LGEGGFGPVYKGVLKKGDEIAV-KRLPGRSGQGLREMKNEASVIAKVQHKNLVRLLGCCI 155
LG+G FG K ++ E+ V K L + R E V+ ++H N+++ +G +
Sbjct: 18 LGKGCFGQAIKVTHRETGEVMVMKELIRFDEETQRTFLKEVKVMRCLEHPNVLKFIGV-L 76
Query: 156 DKDEKI-LIYEYMPN-------KSLDF---------FLFDPTKRMLLDWSANYSSR-LKV 197
KD+++ I EY+ KS+D F D M S N R L
Sbjct: 77 YKDKRLNFITEYIKGGTLRGIIKSMDSQYPWSQRVSFAKDIASGMAYLHSMNIIHRDLNS 136
Query: 198 SNILLDKDINPKISDFGMARICGGNELQANTSR------------IVGTYGYMSPEYAIQ 245
N L+ ++ N ++DFG+AR+ + Q R +VG +M+PE
Sbjct: 137 HNCLVRENKNVVVADFGLARLMVDEKTQPEGLRSLKKPDRKKRYTVVGNPYWMAPEMING 196
Query: 246 GIFSIKSDVFSFGVLLLEIVS 266
+ K DVFSFG++L EI+
Sbjct: 197 RSYDEKVDVFSFGIVLCEIIG 217
>pdb|1YVJ|A Chain A, Crystal Structure Of The Jak3 Kinase Domain In Complex
With A Staurosporine Analogue
Length = 290
Score = 52.8 bits (125), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 71/277 (25%), Positives = 120/277 (43%), Gaps = 38/277 (13%)
Query: 95 NKLGEGGFGPV----YKGVLKK-GDEIAVKRLPGRSGQGLREMKNEASVIAKVQHKNLVR 149
++LG+G FG V Y + G +AVK+L R+ + E ++ + +V+
Sbjct: 13 SQLGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQQRDFQREIQILKALHSDFIVK 72
Query: 150 LLGCCID--KDEKILIYEYMPNKSLDFFLFDPTKRMLLDWSANYSSR------------- 194
G + E L+ EY+P+ L FL R+ YSS+
Sbjct: 73 YRGVSYGPGRPELRLVMEYLPSGCLRDFLQRHRARLDASRLLLYSSQICKGMEYLGSRRC 132
Query: 195 ----LKVSNILLDKDINPKISDFGMARICGGNELQANTSRIVGTYG--YMSPEYAIQGIF 248
L NIL++ + + KI+DFG+A++ ++ R G + +PE IF
Sbjct: 133 VHRDLAARNILVESEAHVKIADFGLAKLLPLDK-DXXVVREPGQSPIFWYAPESLSDNIF 191
Query: 249 SIKSDVFSFGVLLLEIVSGKKTTGFYRTDSLTLLGYAWDLWTSNRTLELID-----PILE 303
S +SDV+SFGV+L E+ + + + L ++G D+ R LEL++ P
Sbjct: 192 SRQSDVWSFGVVLYELFTYCDKSCSPSAEFLRMMGCERDVPALCRLLELLEEGQRLPAPP 251
Query: 304 DEYSSKHMLLRYVNIALLCVQESADDRPTMNEVVSML 340
+ H L++ LC S DRP+ + + L
Sbjct: 252 ACPAEVHELMK------LCWAPSPQDRPSFSALGPQL 282
>pdb|4H3Q|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 52.4 bits (124), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 51/204 (25%), Positives = 96/204 (47%), Gaps = 27/204 (13%)
Query: 90 KFSDANKLGEGGFGPV---YKGVLKKGDEIAVKRL-PGRSGQGLREMKNEASVIAKVQHK 145
++++ + +GEG +G V Y V K +A+K++ P + E ++ +H+
Sbjct: 26 RYTNLSYIGEGAYGMVCSAYDNVNKV--RVAIKKISPFEHQTYCQRTLREIKILLAFRHE 83
Query: 146 NLV------------RLLGCCIDKD------EKILIYEYMPNKSLDFFLFDPTKRMLLDW 187
N++ ++ I +D K+L +++ N + +FL+ + +
Sbjct: 84 NIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRGLKYIH 143
Query: 188 SANYSSR-LKVSNILLDKDINPKISDFGMARICGGNELQAN-TSRIVGTYGYMSPEYAIQ 245
SAN R LK SN+LL+ + KI DFG+AR+ + + V T Y +PE +
Sbjct: 144 SANVLHRDLKPSNLLLNTTSDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLN 203
Query: 246 GIFSIKS-DVFSFGVLLLEIVSGK 268
KS D++S G +L E++S +
Sbjct: 204 SKGYTKSIDIWSVGCILAEMLSNR 227
>pdb|2ACX|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 6
Bound To Amppnp
pdb|2ACX|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 6
Bound To Amppnp
Length = 576
Score = 52.4 bits (124), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 53/204 (25%), Positives = 89/204 (43%), Gaps = 29/204 (14%)
Query: 89 NKFSDANKLGEGGFGPVYKGVLKKGDEI----AVKRLPGRSGQGLREMKNEASVIAKVQH 144
N F LG+GGFG V ++ ++ +++ + +G NE ++ KV
Sbjct: 184 NTFRQYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKQILEKVNS 243
Query: 145 KNLVRLLGCCIDKDEKILIYEYMPNKSLDFFLFD------PTKRMLLDWSAN-------- 190
+ +V L KD L+ M L F ++ P R + ++A
Sbjct: 244 RFVVSLAYAYETKDALCLVLTLMNGGDLKFHIYHMGQAGFPEARAVF-YAAEICCGLEDL 302
Query: 191 YSSR-----LKVSNILLDKDINPKISDFGMA-RICGGNELQANTSRIVGTYGYMSPEYAI 244
+ R LK NILLD + +ISD G+A + G ++ VGT GYM+PE
Sbjct: 303 HRERIVYRDLKPENILLDDHGHIRISDLGLAVHVPEGQTIKGR----VGTVGYMAPEVVK 358
Query: 245 QGIFSIKSDVFSFGVLLLEIVSGK 268
++ D ++ G LL E+++G+
Sbjct: 359 NERYTFSPDWWALGCLLYEMIAGQ 382
>pdb|2WTW|A Chain A, Aurora-A Inhibitor Structure (2nd Crystal Form)
Length = 285
Score = 52.4 bits (124), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 56/211 (26%), Positives = 89/211 (42%), Gaps = 42/211 (19%)
Query: 87 ATNKFSDANKLGEGGFGPVYKGVLKKGDEIAVKRLPGRSG---QGL-REMKNEASVIAKV 142
A F LG+G FG VY K+ I ++ ++ G+ +++ E + + +
Sbjct: 11 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 70
Query: 143 QHKNLVRLLGCCIDKDEKILIYEYMPNKSLDFFL-----FDPTKRMLLDWSANYSSRLK- 196
+H N++RL G D LI EY P + L FD + +A Y + L
Sbjct: 71 RHPNILRLYGYFHDATRVYLILEYAPRGEVYKELQKLSKFDEQR------TATYITELAN 124
Query: 197 -----VSNILLDKDINP-----------KISDFGMARICGGNELQANTSR---IVGTYGY 237
S ++ +DI P KI+DFG + + A +SR + GT Y
Sbjct: 125 ALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWS-------VHAPSSRRTTLCGTLDY 177
Query: 238 MSPEYAIQGIFSIKSDVFSFGVLLLEIVSGK 268
+ PE + K D++S GVL E + GK
Sbjct: 178 LPPEMIEGRMHDEKVDLWSLGVLCYEFLVGK 208
>pdb|2BDW|A Chain A, Crystal Structure Of The Auto-Inhibited Kinase Domain Of
CalciumCALMODULIN ACTIVATED KINASE II
pdb|2BDW|B Chain B, Crystal Structure Of The Auto-Inhibited Kinase Domain Of
CalciumCALMODULIN ACTIVATED KINASE II
Length = 362
Score = 52.4 bits (124), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 57/211 (27%), Positives = 100/211 (47%), Gaps = 37/211 (17%)
Query: 87 ATNKFSD----ANKLGEGGFGPVYKGVLKK-GDEIAVKRLPGR--SGQGLREMKNEASVI 139
A+ KFSD +LG+G F V + V K G E A K + + S + ++++ EA +
Sbjct: 23 ASTKFSDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARIC 82
Query: 140 AKVQHKNLVRLLGCCIDKDEKILIYEYMPNKSL-------DFF----LFDPTKRMLLDWS 188
K+QH N+VRL ++ L+++ + L +F+ +++L +
Sbjct: 83 RKLQHPNIVRLHDSIQEESFHYLVFDLVTGGELFEDIVAREFYSEADASHCIQQILESIA 142
Query: 189 ANYSS-----RLKVSNILL---DKDINPKISDFGMARICGGNELQANTSR----IVGTYG 236
+S+ LK N+LL K K++DFG+A ++ N S GT G
Sbjct: 143 YCHSNGIVHRNLKPENLLLASKAKGAAVKLADFGLA-------IEVNDSEAWHGFAGTPG 195
Query: 237 YMSPEYAIQGIFSIKSDVFSFGVLLLEIVSG 267
Y+SPE + +S D+++ GV+L ++ G
Sbjct: 196 YLSPEVLKKDPYSKPVDIWACGVILYILLVG 226
>pdb|3QA8|A Chain A, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|B Chain B, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|C Chain C, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|D Chain D, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|E Chain E, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|F Chain F, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|G Chain G, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|H Chain H, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
Length = 676
Score = 52.4 bits (124), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 54/204 (26%), Positives = 88/204 (43%), Gaps = 37/204 (18%)
Query: 96 KLGEGGFGPVYKGVLKK-GDEIAVKRLPGRSGQGLREMKN-EASVIAKVQHKNLVRL--- 150
+LG GGFG V + + + G+++A+K+ RE E ++ K+ H N+V
Sbjct: 21 RLGTGGFGYVLRWIHQDTGEQVAIKQCRQELSPKNRERWCLEIQIMKKLNHPNVVSAREV 80
Query: 151 ---LGCCIDKDEKILIYEYMPNKSLDFFL--FD--------PTKRMLLDWSANYSSRLKV 197
L D +L EY L +L F+ P + +L D S+ + R
Sbjct: 81 PDGLQKLAPNDLPLLAMEYCEGGDLRKYLNQFENCCGLKEGPIRTLLSDISS--ALRYLH 138
Query: 198 SNILLDKDINP--------------KISDFGMARICGGNELQANTSRIVGTYGYMSPEYA 243
N ++ +D+ P KI D G A+ EL + VGT Y++PE
Sbjct: 139 ENRIIHRDLKPENIVLQPGPQRLIHKIIDLGYAKELDQGEL---CTEFVGTLQYLAPELL 195
Query: 244 IQGIFSIKSDVFSFGVLLLEIVSG 267
Q +++ D +SFG L E ++G
Sbjct: 196 EQKKYTVTVDYWSFGTLAFECITG 219
>pdb|2W1D|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1E|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1F|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 275
Score = 52.4 bits (124), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 56/211 (26%), Positives = 90/211 (42%), Gaps = 42/211 (19%)
Query: 87 ATNKFSDANKLGEGGFGPVYKGVLKKGDEIAVKRLPGRSG---QGL-REMKNEASVIAKV 142
A F LG+G FG VY K+ I ++ ++ G+ +++ E + + +
Sbjct: 9 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 68
Query: 143 QHKNLVRLLGCCIDKDEKILIYEYMPNKSLDFFL-----FDPTKRMLLDWSANYSSRLK- 196
+H N++RL G D LI EY P ++ L FD + +A Y + L
Sbjct: 69 RHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQR------TATYITELAN 122
Query: 197 -----VSNILLDKDINP-----------KISDFGMARICGGNELQANTSR---IVGTYGY 237
S ++ +DI P KI+DFG + + A +SR + GT Y
Sbjct: 123 ALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWS-------VHAPSSRRTTLCGTLDY 175
Query: 238 MSPEYAIQGIFSIKSDVFSFGVLLLEIVSGK 268
+ PE + K D++S GVL E + GK
Sbjct: 176 LPPEMIEGRMHDEKVDLWSLGVLCYEFLVGK 206
>pdb|1GOL|A Chain A, Coordinates Of Rat Map Kinase Erk2 With An Arginine
Mutation At Position 52
Length = 364
Score = 52.4 bits (124), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 49/204 (24%), Positives = 97/204 (47%), Gaps = 27/204 (13%)
Query: 90 KFSDANKLGEGGFGPV---YKGVLKKGDEIAVKRL-PGRSGQGLREMKNEASVIAKVQHK 145
++++ + +GEG +G V Y + K +A++++ P + E ++ + +H+
Sbjct: 28 RYTNLSYIGEGAYGMVCSAYDNLNKV--RVAIRKISPFEHQTYCQRTLREIKILLRFRHE 85
Query: 146 NLV------------RLLGCCIDKD------EKILIYEYMPNKSLDFFLFDPTKRMLLDW 187
N++ ++ I +D K+L +++ N + +FL+ + +
Sbjct: 86 NIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRGLKYIH 145
Query: 188 SANYSSR-LKVSNILLDKDINPKISDFGMARICGGNELQAN-TSRIVGTYGYMSPEYAIQ 245
SAN R LK SN+LL+ + KI DFG+AR+ + + V T Y +PE +
Sbjct: 146 SANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLN 205
Query: 246 GIFSIKS-DVFSFGVLLLEIVSGK 268
KS D++S G +L E++S +
Sbjct: 206 SKGYTKSIDIWSVGCILAEMLSNR 229
>pdb|3ZUV|A Chain A, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Phosphorylated Map Kinase
Erk2
pdb|3ZUV|C Chain C, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Phosphorylated Map Kinase
Erk2
Length = 364
Score = 52.4 bits (124), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 50/204 (24%), Positives = 96/204 (47%), Gaps = 27/204 (13%)
Query: 90 KFSDANKLGEGGFGPV---YKGVLKKGDEIAVKRL-PGRSGQGLREMKNEASVIAKVQHK 145
++++ + +GEG +G V Y + K +A+K++ P + E ++ + +H+
Sbjct: 28 RYTNLSYIGEGAYGMVCSAYDNLNKV--RVAIKKISPFEHQTYCQRTLREIKILLRFRHE 85
Query: 146 NLV------------RLLGCCIDKD------EKILIYEYMPNKSLDFFLFDPTKRMLLDW 187
N++ ++ I +D K+L +++ N + +FL+ + +
Sbjct: 86 NIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRGLKYIH 145
Query: 188 SANYSSR-LKVSNILLDKDINPKISDFGMARICGGNELQAN-TSRIVGTYGYMSPEYAIQ 245
SAN R LK SN+LL+ + KI DFG+AR+ + V T Y +PE +
Sbjct: 146 SANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLXEXVATRWYRAPEIMLN 205
Query: 246 GIFSIKS-DVFSFGVLLLEIVSGK 268
KS D++S G +L E++S +
Sbjct: 206 SKGYTKSIDIWSVGCILAEMLSNR 229
>pdb|2ERK|A Chain A, Phosphorylated Map Kinase Erk2
Length = 365
Score = 52.4 bits (124), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 50/204 (24%), Positives = 96/204 (47%), Gaps = 27/204 (13%)
Query: 90 KFSDANKLGEGGFGPV---YKGVLKKGDEIAVKRL-PGRSGQGLREMKNEASVIAKVQHK 145
++++ + +GEG +G V Y + K +A+K++ P + E ++ + +H+
Sbjct: 29 RYTNLSYIGEGAYGMVCSAYDNLNKV--RVAIKKISPFEHQTYCQRTLREIKILLRFRHE 86
Query: 146 NLV------------RLLGCCIDKD------EKILIYEYMPNKSLDFFLFDPTKRMLLDW 187
N++ ++ I +D K+L +++ N + +FL+ + +
Sbjct: 87 NIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRGLKYIH 146
Query: 188 SANYSSR-LKVSNILLDKDINPKISDFGMARICGGNELQAN-TSRIVGTYGYMSPEYAIQ 245
SAN R LK SN+LL+ + KI DFG+AR+ + V T Y +PE +
Sbjct: 147 SANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLXEXVATRWYRAPEIMLN 206
Query: 246 GIFSIKS-DVFSFGVLLLEIVSGK 268
KS D++S G +L E++S +
Sbjct: 207 SKGYTKSIDIWSVGCILAEMLSNR 230
>pdb|3RZF|A Chain A, Crystal Structure Of Inhibitor Of Kappab Kinase Beta
(I4122)
Length = 677
Score = 52.4 bits (124), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 54/204 (26%), Positives = 88/204 (43%), Gaps = 37/204 (18%)
Query: 96 KLGEGGFGPVYKGVLKK-GDEIAVKRLPGRSGQGLREMKN-EASVIAKVQHKNLVRL--- 150
+LG GGFG V + + + G+++A+K+ RE E ++ K+ H N+V
Sbjct: 22 RLGTGGFGYVLRWIHQDTGEQVAIKQCRQELSPKNRERWCLEIQIMKKLNHPNVVSAREV 81
Query: 151 ---LGCCIDKDEKILIYEYMPNKSLDFFL--FD--------PTKRMLLDWSANYSSRLKV 197
L D +L EY L +L F+ P + +L D S+ + R
Sbjct: 82 PDGLQKLAPNDLPLLAMEYCEGGDLRKYLNQFENCCGLKEGPIRTLLSDISS--ALRYLH 139
Query: 198 SNILLDKDINP--------------KISDFGMARICGGNELQANTSRIVGTYGYMSPEYA 243
N ++ +D+ P KI D G A+ EL + VGT Y++PE
Sbjct: 140 ENRIIHRDLKPENIVLQPGPQRLIHKIIDLGYAKELDQGEL---CTEFVGTLQYLAPELL 196
Query: 244 IQGIFSIKSDVFSFGVLLLEIVSG 267
Q +++ D +SFG L E ++G
Sbjct: 197 EQKKYTVTVDYWSFGTLAFECITG 220
>pdb|3O50|A Chain A, Crystal Structure Of Benzamide 9 Bound To Auroraa
pdb|3O50|B Chain B, Crystal Structure Of Benzamide 9 Bound To Auroraa
pdb|3O51|A Chain A, Crystal Structure Of Anthranilamide 10 Bound To Auroraa
pdb|3EFW|A Chain A, Structure Of Auroraa With Pyridyl-Pyrimidine Urea
Inhibitor
pdb|3EFW|B Chain B, Structure Of Auroraa With Pyridyl-Pyrimidine Urea
Inhibitor
Length = 267
Score = 52.4 bits (124), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 56/211 (26%), Positives = 90/211 (42%), Gaps = 42/211 (19%)
Query: 87 ATNKFSDANKLGEGGFGPVYKGVLKKGDEIAVKRLPGRSG---QGL-REMKNEASVIAKV 142
A F LG+G FG VY K+ I ++ ++ G+ +++ E + + +
Sbjct: 5 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 64
Query: 143 QHKNLVRLLGCCIDKDEKILIYEYMPNKSLDFFL-----FDPTKRMLLDWSANYSSRLK- 196
+H N++RL G D LI EY P ++ L FD + +A Y + L
Sbjct: 65 RHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQR------TATYITELAN 118
Query: 197 -----VSNILLDKDINP-----------KISDFGMARICGGNELQANTSR---IVGTYGY 237
S ++ +DI P KI+DFG + + A +SR + GT Y
Sbjct: 119 ALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWS-------VHAPSSRRTTLCGTLDY 171
Query: 238 MSPEYAIQGIFSIKSDVFSFGVLLLEIVSGK 268
+ PE + K D++S GVL E + GK
Sbjct: 172 LPPEMIEGRMHDEKVDLWSLGVLCYEFLVGK 202
>pdb|3NYN|A Chain A, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Sangivamycin
pdb|3NYN|B Chain B, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Sangivamycin
pdb|3NYO|A Chain A, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Amp
pdb|3NYO|B Chain B, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Amp
Length = 576
Score = 52.4 bits (124), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 53/204 (25%), Positives = 89/204 (43%), Gaps = 29/204 (14%)
Query: 89 NKFSDANKLGEGGFGPVYKGVLKKGDEI----AVKRLPGRSGQGLREMKNEASVIAKVQH 144
N F LG+GGFG V ++ ++ +++ + +G NE ++ KV
Sbjct: 184 NTFRQYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKQILEKVNS 243
Query: 145 KNLVRLLGCCIDKDEKILIYEYMPNKSLDFFLFD------PTKRMLLDWSAN-------- 190
+ +V L KD L+ M L F ++ P R + ++A
Sbjct: 244 RFVVSLAYAYETKDALCLVLTLMNGGDLKFHIYHMGQAGFPEARAVF-YAAEICCGLEDL 302
Query: 191 YSSR-----LKVSNILLDKDINPKISDFGMA-RICGGNELQANTSRIVGTYGYMSPEYAI 244
+ R LK NILLD + +ISD G+A + G ++ VGT GYM+PE
Sbjct: 303 HRERIVYRDLKPENILLDDHGHIRISDLGLAVHVPEGQTIKGR----VGTVGYMAPEVVK 358
Query: 245 QGIFSIKSDVFSFGVLLLEIVSGK 268
++ D ++ G LL E+++G+
Sbjct: 359 NERYTFSPDWWALGCLLYEMIAGQ 382
>pdb|3H0Y|A Chain A, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|A Chain A, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|B Chain B, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|C Chain C, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H10|A Chain A, Aurora A Inhibitor Complex
pdb|3H10|B Chain B, Aurora A Inhibitor Complex
pdb|3H10|D Chain D, Aurora A Inhibitor Complex
pdb|3P9J|A Chain A, Aurora A Kinase Domain With Phthalazinone Pyrazole
Inhibitor
Length = 268
Score = 52.4 bits (124), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 56/211 (26%), Positives = 90/211 (42%), Gaps = 42/211 (19%)
Query: 87 ATNKFSDANKLGEGGFGPVYKGVLKKGDEIAVKRLPGRSG---QGL-REMKNEASVIAKV 142
A F LG+G FG VY K+ I ++ ++ G+ +++ E + + +
Sbjct: 6 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 65
Query: 143 QHKNLVRLLGCCIDKDEKILIYEYMPNKSLDFFL-----FDPTKRMLLDWSANYSSRLK- 196
+H N++RL G D LI EY P ++ L FD + +A Y + L
Sbjct: 66 RHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQR------TATYITELAN 119
Query: 197 -----VSNILLDKDINP-----------KISDFGMARICGGNELQANTSR---IVGTYGY 237
S ++ +DI P KI+DFG + + A +SR + GT Y
Sbjct: 120 ALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWS-------VHAPSSRRAALCGTLDY 172
Query: 238 MSPEYAIQGIFSIKSDVFSFGVLLLEIVSGK 268
+ PE + K D++S GVL E + GK
Sbjct: 173 LPPEMIEGRMHDEKVDLWSLGVLCYEFLVGK 203
>pdb|2XNG|A Chain A, Structure Of Aurora-A Bound To A Selective Imidazopyrazine
Inhibitor
Length = 283
Score = 52.0 bits (123), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 56/211 (26%), Positives = 90/211 (42%), Gaps = 42/211 (19%)
Query: 87 ATNKFSDANKLGEGGFGPVYKGVLKKGDEIAVKRLPGRSG---QGL-REMKNEASVIAKV 142
A F LG+G FG VY K+ I ++ ++ G+ +++ E + + +
Sbjct: 9 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 68
Query: 143 QHKNLVRLLGCCIDKDEKILIYEYMPNKSLDFFL-----FDPTKRMLLDWSANYSSRLK- 196
+H N++RL G D LI EY P ++ L FD + +A Y + L
Sbjct: 69 RHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQR------TATYITELAN 122
Query: 197 -----VSNILLDKDINP-----------KISDFGMARICGGNELQANTSR---IVGTYGY 237
S ++ +DI P KI+DFG + + A +SR + GT Y
Sbjct: 123 ALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWS-------VHAPSSRRTTLCGTLDY 175
Query: 238 MSPEYAIQGIFSIKSDVFSFGVLLLEIVSGK 268
+ PE + K D++S GVL E + GK
Sbjct: 176 LPPEMIEGRMHDEKVDLWSLGVLCYEFLVGK 206
>pdb|2C6D|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With
Adpnp
Length = 275
Score = 52.0 bits (123), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 56/211 (26%), Positives = 90/211 (42%), Gaps = 42/211 (19%)
Query: 87 ATNKFSDANKLGEGGFGPVYKGVLKKGDEIAVKRLPGRSG---QGL-REMKNEASVIAKV 142
A F LG+G FG VY K+ I ++ ++ G+ +++ E + + +
Sbjct: 6 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 65
Query: 143 QHKNLVRLLGCCIDKDEKILIYEYMPNKSLDFFL-----FDPTKRMLLDWSANYSSRLK- 196
+H N++RL G D LI EY P ++ L FD + +A Y + L
Sbjct: 66 RHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQR------TATYITELAN 119
Query: 197 -----VSNILLDKDINP-----------KISDFGMARICGGNELQANTSR---IVGTYGY 237
S ++ +DI P KI+DFG + + A +SR + GT Y
Sbjct: 120 ALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWS-------VHAPSSRRTDLCGTLDY 172
Query: 238 MSPEYAIQGIFSIKSDVFSFGVLLLEIVSGK 268
+ PE + K D++S GVL E + GK
Sbjct: 173 LPPEMIEGRMHDEKVDLWSLGVLCYEFLVGK 203
>pdb|3LAU|A Chain A, Crystal Structure Of Aurora2 Kinase In Complex With A
Gsk3beta Inhibitor
Length = 287
Score = 52.0 bits (123), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 56/211 (26%), Positives = 90/211 (42%), Gaps = 42/211 (19%)
Query: 87 ATNKFSDANKLGEGGFGPVYKGVLKKGDEIAVKRLPGRSG---QGL-REMKNEASVIAKV 142
A F LG+G FG VY K+ I ++ ++ G+ +++ E + + +
Sbjct: 6 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 65
Query: 143 QHKNLVRLLGCCIDKDEKILIYEYMPNKSLDFFL-----FDPTKRMLLDWSANYSSRLK- 196
+H N++RL G D LI EY P ++ L FD + +A Y + L
Sbjct: 66 RHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQR------TATYITELAN 119
Query: 197 -----VSNILLDKDINP-----------KISDFGMARICGGNELQANTSR---IVGTYGY 237
S ++ +DI P KI+DFG + + A +SR + GT Y
Sbjct: 120 ALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWS-------VHAPSSRRTDLCGTLDY 172
Query: 238 MSPEYAIQGIFSIKSDVFSFGVLLLEIVSGK 268
+ PE + K D++S GVL E + GK
Sbjct: 173 LPPEMIEGRMHDEKVDLWSLGVLCYEFLVGK 203
>pdb|3NRM|A Chain A, Imidazo[1,2-A]pyrazine-Based Aurora Kinase Inhibitors
Length = 283
Score = 52.0 bits (123), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 57/218 (26%), Positives = 92/218 (42%), Gaps = 42/218 (19%)
Query: 80 SFSSVSTATNKFSDANKLGEGGFGPVYKGVLKKGDEIAVKRLPGRSG---QGL-REMKNE 135
+ S A F LG+G FG VY K+ I ++ ++ G+ +++ E
Sbjct: 2 AMGSRQWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRRE 61
Query: 136 ASVIAKVQHKNLVRLLGCCIDKDEKILIYEYMPNKSLDFFL-----FDPTKRMLLDWSAN 190
+ + ++H N++RL G D LI EY P ++ L FD + +A
Sbjct: 62 VEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQR------TAT 115
Query: 191 YSSRLK------VSNILLDKDINP-----------KISDFGMARICGGNELQANTSR--- 230
Y + L S ++ +DI P KI+DFG + + A +SR
Sbjct: 116 YITELANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWS-------VHAPSSRRAA 168
Query: 231 IVGTYGYMSPEYAIQGIFSIKSDVFSFGVLLLEIVSGK 268
+ GT Y+ PE + K D++S GVL E + GK
Sbjct: 169 LCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGK 206
>pdb|2W1C|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1G|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 275
Score = 52.0 bits (123), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 56/211 (26%), Positives = 90/211 (42%), Gaps = 42/211 (19%)
Query: 87 ATNKFSDANKLGEGGFGPVYKGVLKKGDEIAVKRLPGRSG---QGL-REMKNEASVIAKV 142
A F LG+G FG VY K+ I ++ ++ G+ +++ E + + +
Sbjct: 9 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 68
Query: 143 QHKNLVRLLGCCIDKDEKILIYEYMPNKSLDFFL-----FDPTKRMLLDWSANYSSRLK- 196
+H N++RL G D LI EY P ++ L FD + +A Y + L
Sbjct: 69 RHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQR------TATYITELAN 122
Query: 197 -----VSNILLDKDINP-----------KISDFGMARICGGNELQANTSR---IVGTYGY 237
S ++ +DI P KI+DFG + + A +SR + GT Y
Sbjct: 123 ALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWS-------VHAPSSRRXXLCGTLDY 175
Query: 238 MSPEYAIQGIFSIKSDVFSFGVLLLEIVSGK 268
+ PE + K D++S GVL E + GK
Sbjct: 176 LPPEMIEGRMHDEKVDLWSLGVLCYEFLVGK 206
>pdb|3HA6|A Chain A, Crystal Structure Of Aurora A In Complex With Tpx2 And
Compound 10
Length = 268
Score = 52.0 bits (123), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 56/211 (26%), Positives = 90/211 (42%), Gaps = 42/211 (19%)
Query: 87 ATNKFSDANKLGEGGFGPVYKGVLKKGDEIAVKRLPGRSG---QGL-REMKNEASVIAKV 142
A F LG+G FG VY K+ I ++ ++ G+ +++ E + + +
Sbjct: 6 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 65
Query: 143 QHKNLVRLLGCCIDKDEKILIYEYMPNKSLDFFL-----FDPTKRMLLDWSANYSSRLK- 196
+H N++RL G D LI EY P ++ L FD + +A Y + L
Sbjct: 66 RHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQR------TATYITELAN 119
Query: 197 -----VSNILLDKDINP-----------KISDFGMARICGGNELQANTSR---IVGTYGY 237
S ++ +DI P KI+DFG + + A +SR + GT Y
Sbjct: 120 ALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWS-------VHAPSSRRXXLCGTLDY 172
Query: 238 MSPEYAIQGIFSIKSDVFSFGVLLLEIVSGK 268
+ PE + K D++S GVL E + GK
Sbjct: 173 LPPEMIEGRMHDEKVDLWSLGVLCYEFLVGK 203
>pdb|3G33|A Chain A, Crystal Structure Of Cdk4CYCLIN D3
pdb|3G33|C Chain C, Crystal Structure Of Cdk4CYCLIN D3
Length = 308
Score = 52.0 bits (123), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 59/216 (27%), Positives = 103/216 (47%), Gaps = 36/216 (16%)
Query: 85 STATNKFSDANKLGEGGFGPVYKGV-LKKGDEIAVK--RLPGRSGQGLR---EMKNEASV 138
S AT+++ ++G G +G VYK G +A+K R+P G G E ++
Sbjct: 5 SMATSRYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGGGGGGGLPISTVREVAL 64
Query: 139 IAKVQ---HKNLVRLLGCC----IDKDEKI-LIYEYMPNKSLDFFL-------------F 177
+ +++ H N+VRL+ C D++ K+ L++E++ ++ L +L
Sbjct: 65 LRRLEAFEHPNVVRLMDVCATSRTDREIKVTLVFEHV-DQDLRTYLDKAPPPGLPAETIK 123
Query: 178 DPTKRML--LDW-SAN--YSSRLKVSNILLDKDINPKISDFGMARICGGNELQANTSRIV 232
D ++ L LD+ AN LK NIL+ K++DFG+ARI Q + +V
Sbjct: 124 DLMRQFLRGLDFLHANCIVHRDLKPENILVTSGGTVKLADFGLARI---YSYQMALTPVV 180
Query: 233 GTYGYMSPEYAIQGIFSIKSDVFSFGVLLLEIVSGK 268
T Y +PE +Q ++ D++S G + E+ K
Sbjct: 181 VTLWYRAPEVLLQSTYATPVDMWSVGCIFAEMFRRK 216
>pdb|3E5A|A Chain A, Crystal Structure Of Aurora A In Complex With Vx-680 And
Tpx2
Length = 268
Score = 52.0 bits (123), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 56/211 (26%), Positives = 90/211 (42%), Gaps = 42/211 (19%)
Query: 87 ATNKFSDANKLGEGGFGPVYKGVLKKGDEIAVKRLPGRSG---QGL-REMKNEASVIAKV 142
A F LG+G FG VY K+ I ++ ++ G+ +++ E + + +
Sbjct: 6 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 65
Query: 143 QHKNLVRLLGCCIDKDEKILIYEYMPNKSLDFFL-----FDPTKRMLLDWSANYSSRLK- 196
+H N++RL G D LI EY P ++ L FD + +A Y + L
Sbjct: 66 RHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQR------TATYITELAN 119
Query: 197 -----VSNILLDKDINP-----------KISDFGMARICGGNELQANTSR---IVGTYGY 237
S ++ +DI P KI+DFG + + A +SR + GT Y
Sbjct: 120 ALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWS-------VHAPSSRRTXLCGTLDY 172
Query: 238 MSPEYAIQGIFSIKSDVFSFGVLLLEIVSGK 268
+ PE + K D++S GVL E + GK
Sbjct: 173 LPPEMIEGRMHDEKVDLWSLGVLCYEFLVGK 203
>pdb|2J50|A Chain A, Structure Of Aurora-2 In Complex With Pha-739358
pdb|2J50|B Chain B, Structure Of Aurora-2 In Complex With Pha-739358
Length = 280
Score = 52.0 bits (123), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 56/211 (26%), Positives = 90/211 (42%), Gaps = 42/211 (19%)
Query: 87 ATNKFSDANKLGEGGFGPVYKGVLKKGDEIAVKRLPGRSG---QGL-REMKNEASVIAKV 142
A F LG+G FG VY K+ I ++ ++ G+ +++ E + + +
Sbjct: 6 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 65
Query: 143 QHKNLVRLLGCCIDKDEKILIYEYMPNKSLDFFL-----FDPTKRMLLDWSANYSSRLK- 196
+H N++RL G D LI EY P ++ L FD + +A Y + L
Sbjct: 66 RHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQR------TATYITELAN 119
Query: 197 -----VSNILLDKDINP-----------KISDFGMARICGGNELQANTSR---IVGTYGY 237
S ++ +DI P KI+DFG + + A +SR + GT Y
Sbjct: 120 ALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWS-------VHAPSSRRTTLCGTLDY 172
Query: 238 MSPEYAIQGIFSIKSDVFSFGVLLLEIVSGK 268
+ PE + K D++S GVL E + GK
Sbjct: 173 LPPEMIEGRMHDEKVDLWSLGVLCYEFLVGK 203
>pdb|2XRU|A Chain A, Aurora-A T288e Complexed With Pha-828300
Length = 280
Score = 52.0 bits (123), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 56/211 (26%), Positives = 90/211 (42%), Gaps = 42/211 (19%)
Query: 87 ATNKFSDANKLGEGGFGPVYKGVLKKGDEIAVKRLPGRSG---QGL-REMKNEASVIAKV 142
A F LG+G FG VY K+ I ++ ++ G+ +++ E + + +
Sbjct: 6 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 65
Query: 143 QHKNLVRLLGCCIDKDEKILIYEYMPNKSLDFFL-----FDPTKRMLLDWSANYSSRLK- 196
+H N++RL G D LI EY P ++ L FD + +A Y + L
Sbjct: 66 RHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQR------TATYITELAN 119
Query: 197 -----VSNILLDKDINP-----------KISDFGMARICGGNELQANTSR---IVGTYGY 237
S ++ +DI P KI+DFG + + A +SR + GT Y
Sbjct: 120 ALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWS-------VHAPSSRRTELCGTLDY 172
Query: 238 MSPEYAIQGIFSIKSDVFSFGVLLLEIVSGK 268
+ PE + K D++S GVL E + GK
Sbjct: 173 LPPEMIEGRMHDEKVDLWSLGVLCYEFLVGK 203
>pdb|1MQ4|A Chain A, Crystal Structure Of Aurora-A Protein Kinase
pdb|2NP8|A Chain A, Structural Basis For The Inhibition Of Aurora A Kinase By
A Novel Class Of High Affinity Disubstituted Pyrimidine
Inhibitors
pdb|2X81|A Chain A, Structure Of Aurora A In Complex With Mln8054
pdb|3MYG|A Chain A, Aurora A Kinase Complexed With Sch 1473759
pdb|3VAP|A Chain A, Synthesis And Sar Studies Of Imidazo-[1,2-A]-Pyrazine
Aurora Kinase Inhibitors With Improved Off Target Kinase
Selectivity
Length = 272
Score = 52.0 bits (123), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 56/211 (26%), Positives = 90/211 (42%), Gaps = 42/211 (19%)
Query: 87 ATNKFSDANKLGEGGFGPVYKGVLKKGDEIAVKRLPGRSG---QGL-REMKNEASVIAKV 142
A F LG+G FG VY K+ I ++ ++ G+ +++ E + + +
Sbjct: 10 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 69
Query: 143 QHKNLVRLLGCCIDKDEKILIYEYMPNKSLDFFL-----FDPTKRMLLDWSANYSSRLK- 196
+H N++RL G D LI EY P ++ L FD + +A Y + L
Sbjct: 70 RHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQR------TATYITELAN 123
Query: 197 -----VSNILLDKDINP-----------KISDFGMARICGGNELQANTSR---IVGTYGY 237
S ++ +DI P KI+DFG + + A +SR + GT Y
Sbjct: 124 ALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWS-------VHAPSSRRTTLCGTLDY 176
Query: 238 MSPEYAIQGIFSIKSDVFSFGVLLLEIVSGK 268
+ PE + K D++S GVL E + GK
Sbjct: 177 LPPEMIEGRMHDEKVDLWSLGVLCYEFLVGK 207
>pdb|2JAV|A Chain A, Human Kinase With Pyrrole-Indolinone Ligand
pdb|2W5B|A Chain A, Human Nek2 Kinase Atpgammas-bound
pdb|2W5H|A Chain A, Human Nek2 Kinase Apo
Length = 279
Score = 52.0 bits (123), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 30/72 (41%), Positives = 42/72 (58%), Gaps = 2/72 (2%)
Query: 195 LKVSNILLDKDINPKISDFGMARICGGNELQANTSRIVGTYGYMSPEYAIQGIFSIKSDV 254
LK +N+ LD N K+ DFG+ARI N + VGT YMSPE + ++ KSD+
Sbjct: 142 LKPANVFLDGKQNVKLGDFGLARIL--NHDTSFAKAFVGTPYYMSPEQMNRMSYNEKSDI 199
Query: 255 FSFGVLLLEIVS 266
+S G LL E+ +
Sbjct: 200 WSLGCLLYELCA 211
>pdb|3R21|A Chain A, Design, Synthesis, And Biological Evaluation Of
Pyrazolopyridine- Sulfonamides As Potent
Multiple-Mitotic Kinase (Mmk) Inhibitors (Part I)
pdb|3R22|A Chain A, Design, Synthesis, And Biological Evaluation Of
Pyrazolopyridine- Sulfonamides As Potent
Multiple-Mitotic Kinase (Mmk) Inhibitors (Part I)
pdb|4DHF|A Chain A, Structure Of Aurora A Mutant Bound To Biogenidec Cpd 15
pdb|4DHF|B Chain B, Structure Of Aurora A Mutant Bound To Biogenidec Cpd 15
Length = 271
Score = 52.0 bits (123), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 57/217 (26%), Positives = 91/217 (41%), Gaps = 42/217 (19%)
Query: 81 FSSVSTATNKFSDANKLGEGGFGPVYKGVLKKGDEIAVKRLPGRSG---QGL-REMKNEA 136
S A F LG+G FG VY K+ I ++ ++ G+ +++ E
Sbjct: 3 LGSRQWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREV 62
Query: 137 SVIAKVQHKNLVRLLGCCIDKDEKILIYEYMPNKSLDFFL-----FDPTKRMLLDWSANY 191
+ + ++H N++RL G D LI EY P ++ L FD + +A Y
Sbjct: 63 EIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQR------TATY 116
Query: 192 SSRLK------VSNILLDKDINP-----------KISDFGMARICGGNELQANTSR---I 231
+ L S ++ +DI P KI+DFG + + A +SR +
Sbjct: 117 ITELANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWS-------VHAPSSRRDDL 169
Query: 232 VGTYGYMSPEYAIQGIFSIKSDVFSFGVLLLEIVSGK 268
GT Y+ PE + K D++S GVL E + GK
Sbjct: 170 CGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGK 206
>pdb|3UNZ|A Chain A, Aurora A In Complex With Rpm1679
pdb|3UNZ|B Chain B, Aurora A In Complex With Rpm1679
pdb|3UO4|A Chain A, Aurora A In Complex With Rpm1680
pdb|3UO5|A Chain A, Aurora A In Complex With Yl1-038-31
pdb|3UO6|A Chain A, Aurora A In Complex With Yl5-083
pdb|3UO6|B Chain B, Aurora A In Complex With Yl5-083
pdb|3UOD|A Chain A, Aurora A In Complex With Rpm1693
pdb|3UOH|A Chain A, Aurora A In Complex With Rpm1722
pdb|3UOH|B Chain B, Aurora A In Complex With Rpm1722
pdb|3UOJ|A Chain A, Aurora A In Complex With Rpm1715
pdb|3UOJ|B Chain B, Aurora A In Complex With Rpm1715
pdb|3UOK|A Chain A, Aurora A In Complex With Yl5-81-1
pdb|3UOK|B Chain B, Aurora A In Complex With Yl5-81-1
pdb|3UOL|A Chain A, Aurora A In Complex With So2-162
pdb|3UOL|B Chain B, Aurora A In Complex With So2-162
pdb|3UP2|A Chain A, Aurora A In Complex With Rpm1686
pdb|3UP7|A Chain A, Aurora A In Complex With Yl1-038-09
pdb|4DEA|A Chain A, Aurora A In Complex With Yl1-038-18
pdb|4DEB|A Chain A, Aurora A In Complex With Rk2-17-01
pdb|4DED|A Chain A, Aurora A In Complex With Yl1-038-21
pdb|4DEE|A Chain A, Aurora A In Complex With Adp
Length = 279
Score = 52.0 bits (123), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 56/211 (26%), Positives = 90/211 (42%), Gaps = 42/211 (19%)
Query: 87 ATNKFSDANKLGEGGFGPVYKGVLKKGDEIAVKRLPGRSG---QGL-REMKNEASVIAKV 142
A F LG+G FG VY K+ I ++ ++ G+ +++ E + + +
Sbjct: 7 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 66
Query: 143 QHKNLVRLLGCCIDKDEKILIYEYMPNKSLDFFL-----FDPTKRMLLDWSANYSSRLK- 196
+H N++RL G D LI EY P ++ L FD + +A Y + L
Sbjct: 67 RHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQR------TATYITELAN 120
Query: 197 -----VSNILLDKDINP-----------KISDFGMARICGGNELQANTSR---IVGTYGY 237
S ++ +DI P KI+DFG + + A +SR + GT Y
Sbjct: 121 ALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWS-------VHAPSSRRDTLCGTLDY 173
Query: 238 MSPEYAIQGIFSIKSDVFSFGVLLLEIVSGK 268
+ PE + K D++S GVL E + GK
Sbjct: 174 LPPEMIEGRMHDEKVDLWSLGVLCYEFLVGK 204
>pdb|2X6D|A Chain A, Aurora-A Bound To An Inhibitor
pdb|2X6E|A Chain A, Aurora-A Bound To An Inhibitor
Length = 285
Score = 52.0 bits (123), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 56/211 (26%), Positives = 90/211 (42%), Gaps = 42/211 (19%)
Query: 87 ATNKFSDANKLGEGGFGPVYKGVLKKGDEIAVKRLPGRSG---QGL-REMKNEASVIAKV 142
A F LG+G FG VY K+ I ++ ++ G+ +++ E + + +
Sbjct: 11 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 70
Query: 143 QHKNLVRLLGCCIDKDEKILIYEYMPNKSLDFFL-----FDPTKRMLLDWSANYSSRLK- 196
+H N++RL G D LI EY P ++ L FD + +A Y + L
Sbjct: 71 RHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQR------TATYITELAN 124
Query: 197 -----VSNILLDKDINP-----------KISDFGMARICGGNELQANTSR---IVGTYGY 237
S ++ +DI P KI+DFG + + A +SR + GT Y
Sbjct: 125 ALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWS-------VHAPSSRRTTLCGTLDY 177
Query: 238 MSPEYAIQGIFSIKSDVFSFGVLLLEIVSGK 268
+ PE + K D++S GVL E + GK
Sbjct: 178 LPPEMIEGRMHDEKVDLWSLGVLCYEFLVGK 208
>pdb|3FDN|A Chain A, Structure-Based Drug Design Of Novel Aurora Kinase A
Inhibitors: Structure Basis For Potency And Specificity
pdb|3K5U|A Chain A, Identification, Sar Studies And X-Ray Cocrystal Analysis
Of A Novel Furano-Pyrimidine Aurora Kinase A Inhibitor
pdb|3M11|A Chain A, Crystal Structure Of Aurora A Kinase Complexed With
Inhibitor
Length = 279
Score = 52.0 bits (123), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 56/211 (26%), Positives = 90/211 (42%), Gaps = 42/211 (19%)
Query: 87 ATNKFSDANKLGEGGFGPVYKGVLKKGDEIAVKRLPGRSG---QGL-REMKNEASVIAKV 142
A F LG+G FG VY K+ I ++ ++ G+ +++ E + + +
Sbjct: 7 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 66
Query: 143 QHKNLVRLLGCCIDKDEKILIYEYMPNKSLDFFL-----FDPTKRMLLDWSANYSSRLK- 196
+H N++RL G D LI EY P ++ L FD + +A Y + L
Sbjct: 67 RHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQR------TATYITELAN 120
Query: 197 -----VSNILLDKDINP-----------KISDFGMARICGGNELQANTSR---IVGTYGY 237
S ++ +DI P KI+DFG + + A +SR + GT Y
Sbjct: 121 ALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWS-------VHAPSSRRTDLCGTLDY 173
Query: 238 MSPEYAIQGIFSIKSDVFSFGVLLLEIVSGK 268
+ PE + K D++S GVL E + GK
Sbjct: 174 LPPEMIEGRMHDEKVDLWSLGVLCYEFLVGK 204
>pdb|1OL5|A Chain A, Structure Of Aurora-A 122-403, Phosphorylated On Thr287,
Thr288 And Bound To Tpx2 1-43
pdb|1OL7|A Chain A, Structure Of Human Aurora-A 122-403 Phosphorylated On
Thr287, Thr288
Length = 282
Score = 52.0 bits (123), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 56/211 (26%), Positives = 90/211 (42%), Gaps = 42/211 (19%)
Query: 87 ATNKFSDANKLGEGGFGPVYKGVLKKGDEIAVKRLPGRSG---QGL-REMKNEASVIAKV 142
A F LG+G FG VY K+ I ++ ++ G+ +++ E + + +
Sbjct: 8 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 67
Query: 143 QHKNLVRLLGCCIDKDEKILIYEYMPNKSLDFFL-----FDPTKRMLLDWSANYSSRLK- 196
+H N++RL G D LI EY P ++ L FD + +A Y + L
Sbjct: 68 RHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQR------TATYITELAN 121
Query: 197 -----VSNILLDKDINP-----------KISDFGMARICGGNELQANTSR---IVGTYGY 237
S ++ +DI P KI+DFG + + A +SR + GT Y
Sbjct: 122 ALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWS-------VHAPSSRRXXLCGTLDY 174
Query: 238 MSPEYAIQGIFSIKSDVFSFGVLLLEIVSGK 268
+ PE + K D++S GVL E + GK
Sbjct: 175 LPPEMIEGRMHDEKVDLWSLGVLCYEFLVGK 205
>pdb|2WTV|A Chain A, Aurora-A Inhibitor Structure
pdb|2WTV|B Chain B, Aurora-A Inhibitor Structure
pdb|2WTV|C Chain C, Aurora-A Inhibitor Structure
pdb|2WTV|D Chain D, Aurora-A Inhibitor Structure
Length = 285
Score = 52.0 bits (123), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 56/211 (26%), Positives = 89/211 (42%), Gaps = 42/211 (19%)
Query: 87 ATNKFSDANKLGEGGFGPVYKGVLKKGDEIAVKRLPGRSG---QGL-REMKNEASVIAKV 142
A F LG+G FG VY K+ I ++ ++ G+ +++ E + + +
Sbjct: 11 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 70
Query: 143 QHKNLVRLLGCCIDKDEKILIYEYMPNKSLDFFL-----FDPTKRMLLDWSANYSSRLK- 196
+H N++RL G D LI EY P + L FD + +A Y + L
Sbjct: 71 RHPNILRLYGYFHDATRVYLILEYAPRGEVYKELQKLSKFDEQR------TATYITELAN 124
Query: 197 -----VSNILLDKDINP-----------KISDFGMARICGGNELQANTSR---IVGTYGY 237
S ++ +DI P KI+DFG + + A +SR + GT Y
Sbjct: 125 ALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWS-------VHAPSSRRXXLXGTLDY 177
Query: 238 MSPEYAIQGIFSIKSDVFSFGVLLLEIVSGK 268
+ PE + K D++S GVL E + GK
Sbjct: 178 LPPEMIEGRMHDEKVDLWSLGVLCYEFLVGK 208
>pdb|2C6E|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With A
5-Aminopyrimidinyl Quinazoline Inhibitor
pdb|2C6E|B Chain B, Aurora A Kinase Activated Mutant (T287d) In Complex With A
5-Aminopyrimidinyl Quinazoline Inhibitor
Length = 283
Score = 52.0 bits (123), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 56/211 (26%), Positives = 90/211 (42%), Gaps = 42/211 (19%)
Query: 87 ATNKFSDANKLGEGGFGPVYKGVLKKGDEIAVKRLPGRSG---QGL-REMKNEASVIAKV 142
A F LG+G FG VY K+ I ++ ++ G+ +++ E + + +
Sbjct: 11 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 70
Query: 143 QHKNLVRLLGCCIDKDEKILIYEYMPNKSLDFFL-----FDPTKRMLLDWSANYSSRLK- 196
+H N++RL G D LI EY P ++ L FD + +A Y + L
Sbjct: 71 RHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQR------TATYITELAN 124
Query: 197 -----VSNILLDKDINP-----------KISDFGMARICGGNELQANTSR---IVGTYGY 237
S ++ +DI P KI+DFG + + A +SR + GT Y
Sbjct: 125 ALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWS-------VHAPSSRRTDLCGTLDY 177
Query: 238 MSPEYAIQGIFSIKSDVFSFGVLLLEIVSGK 268
+ PE + K D++S GVL E + GK
Sbjct: 178 LPPEMIEGRMHDEKVDLWSLGVLCYEFLVGK 208
>pdb|1MUO|A Chain A, Crystal Structure Of Aurora-2, An Oncogenic Serine-
Threonine Kinase
Length = 297
Score = 52.0 bits (123), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 56/211 (26%), Positives = 90/211 (42%), Gaps = 42/211 (19%)
Query: 87 ATNKFSDANKLGEGGFGPVYKGVLKKGDEIAVKRLPGRSG---QGL-REMKNEASVIAKV 142
A F LG+G FG VY K+ I ++ ++ G+ +++ E + + +
Sbjct: 23 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 82
Query: 143 QHKNLVRLLGCCIDKDEKILIYEYMPNKSLDFFL-----FDPTKRMLLDWSANYSSRLK- 196
+H N++RL G D LI EY P ++ L FD + +A Y + L
Sbjct: 83 RHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQR------TATYITELAN 136
Query: 197 -----VSNILLDKDINP-----------KISDFGMARICGGNELQANTSR---IVGTYGY 237
S ++ +DI P KI+DFG + + A +SR + GT Y
Sbjct: 137 ALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWS-------VHAPSSRRTTLCGTLDY 189
Query: 238 MSPEYAIQGIFSIKSDVFSFGVLLLEIVSGK 268
+ PE + K D++S GVL E + GK
Sbjct: 190 LPPEMIEGRMHDEKVDLWSLGVLCYEFLVGK 220
>pdb|3LXK|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
pdb|3LXL|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
Length = 327
Score = 52.0 bits (123), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 70/280 (25%), Positives = 121/280 (43%), Gaps = 44/280 (15%)
Query: 95 NKLGEGGFGPV----YKGVLKK-GDEIAVKRLPGRSGQGLREMKNEASVIAKVQHKNLVR 149
++LG+G FG V Y + G +AVK+L R+ + E ++ + +V+
Sbjct: 29 SQLGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQQRDFQREIQILKALHSDFIVK 88
Query: 150 LLGCCIDKDEKIL--IYEYMPNKSLDFFLFDPTKRMLLDWSANYSSR------------- 194
G + L + EY+P+ L FL R+ YSS+
Sbjct: 89 YRGVSYGPGRQSLRLVMEYLPSGCLRDFLQRHRARLDASRLLLYSSQICKGMEYLGSRRC 148
Query: 195 ----LKVSNILLDKDINPKISDFGMARICGGNE-----LQANTSRIVGTYGYMSPEYAIQ 245
L NIL++ + + KI+DFG+A++ ++ + S I + +PE
Sbjct: 149 VHRDLAARNILVESEAHVKIADFGLAKLLPLDKDYYVVREPGQSPIF----WYAPESLSD 204
Query: 246 GIFSIKSDVFSFGVLLLEIVSGKKTTGFYRTDSLTLLGYAWDLWTSNRTLELID-----P 300
IFS +SDV+SFGV+L E+ + + + L ++G D+ +R LEL++ P
Sbjct: 205 NIFSRQSDVWSFGVVLYELFTYCDKSCSPSAEFLRMMGCERDVPALSRLLELLEEGQRLP 264
Query: 301 ILEDEYSSKHMLLRYVNIALLCVQESADDRPTMNEVVSML 340
+ H L++ LC S DRP+ + + L
Sbjct: 265 APPACPAEVHELMK------LCWAPSPQDRPSFSALGPQL 298
>pdb|3F69|A Chain A, Crystal Structure Of The Mycobacterium Tuberculosis Pknb
Mutant Kinase Domain In Complex With Kt5720
pdb|3F69|B Chain B, Crystal Structure Of The Mycobacterium Tuberculosis Pknb
Mutant Kinase Domain In Complex With Kt5720
Length = 311
Score = 51.6 bits (122), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 28/76 (36%), Positives = 45/76 (59%), Gaps = 3/76 (3%)
Query: 195 LKVSNILLDKDINPKISDFGMARICG--GNELQANTSRIVGTYGYMSPEYAIQGIFSIKS 252
+K +NIL+ K+ DFG+AR GN + T+ ++GT Y+SPE A +S
Sbjct: 142 VKPANILISATNAVKVVDFGIARAIADSGNSVX-QTAAVIGTAQYLSPEQARGDSVDARS 200
Query: 253 DVFSFGVLLLEIVSGK 268
DV+S G +L E+++G+
Sbjct: 201 DVYSLGCVLYEVLTGE 216
>pdb|2WQE|A Chain A, Structure Of S155r Aurora-A Somatic Mutant
Length = 262
Score = 51.6 bits (122), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 56/211 (26%), Positives = 90/211 (42%), Gaps = 42/211 (19%)
Query: 87 ATNKFSDANKLGEGGFGPVYKGVLKKGDEIAVKRLPGRSG---QGL-REMKNEASVIAKV 142
A F LG+G FG VY K+ I ++ ++ G+ +++ E + + +
Sbjct: 3 ALEDFEIGRPLGKGKFGNVYLAREKQRKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 62
Query: 143 QHKNLVRLLGCCIDKDEKILIYEYMPNKSLDFFL-----FDPTKRMLLDWSANYSSRLK- 196
+H N++RL G D LI EY P ++ L FD + +A Y + L
Sbjct: 63 RHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQR------TATYITELAN 116
Query: 197 -----VSNILLDKDINP-----------KISDFGMARICGGNELQANTSR---IVGTYGY 237
S ++ +DI P KI+DFG + + A +SR + GT Y
Sbjct: 117 ALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWS-------VHAPSSRRTTLCGTLDY 169
Query: 238 MSPEYAIQGIFSIKSDVFSFGVLLLEIVSGK 268
+ PE + K D++S GVL E + GK
Sbjct: 170 LPPEMIEGRMHDEKVDLWSLGVLCYEFLVGK 200
>pdb|4HVD|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((s)-1,2,2-trimethyl-propyl)-amide
pdb|4HVG|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((s)-2-hydroxy-1,2-dimethyl-propyl)- Amide
pdb|4HVH|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((r)-2-hydroxy-1,2-dimethyl-propyl
pdb|4HVI|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((r)-1-methyl-2-oxo-2-piperidin-1-yl- Ethyl)-amide
Length = 314
Score = 51.6 bits (122), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 70/280 (25%), Positives = 121/280 (43%), Gaps = 44/280 (15%)
Query: 95 NKLGEGGFGPV----YKGVLKK-GDEIAVKRLPGRSGQGLREMKNEASVIAKVQHKNLVR 149
++LG+G FG V Y + G +AVK+L R+ + E ++ + +V+
Sbjct: 16 SQLGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQQRDFQREIQILKALHSDFIVK 75
Query: 150 LLGCCIDKDEKIL--IYEYMPNKSLDFFLFDPTKRMLLDWSANYSSR------------- 194
G + L + EY+P+ L FL R+ YSS+
Sbjct: 76 YRGVSYGPGRQSLRLVMEYLPSGCLRDFLQRHRARLDASRLLLYSSQICKGMEYLGSRRC 135
Query: 195 ----LKVSNILLDKDINPKISDFGMARICGGNE-----LQANTSRIVGTYGYMSPEYAIQ 245
L NIL++ + + KI+DFG+A++ ++ + S I + +PE
Sbjct: 136 VHRDLAARNILVESEAHVKIADFGLAKLLPLDKDYYVVREPGQSPIF----WYAPESLSD 191
Query: 246 GIFSIKSDVFSFGVLLLEIVSGKKTTGFYRTDSLTLLGYAWDLWTSNRTLELID-----P 300
IFS +SDV+SFGV+L E+ + + + L ++G D+ +R LEL++ P
Sbjct: 192 NIFSRQSDVWSFGVVLYELFTYCDKSCSPSAEFLRMMGSERDVPALSRLLELLEEGQRLP 251
Query: 301 ILEDEYSSKHMLLRYVNIALLCVQESADDRPTMNEVVSML 340
+ H L++ LC S DRP+ + + L
Sbjct: 252 APPACPAEVHELMK------LCWAPSPQDRPSFSALGPQL 285
>pdb|2ZOQ|A Chain A, Structural Dissection Of Human Mitogen-Activated Kinase
Erk1
pdb|2ZOQ|B Chain B, Structural Dissection Of Human Mitogen-Activated Kinase
Erk1
Length = 382
Score = 51.6 bits (122), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 51/204 (25%), Positives = 93/204 (45%), Gaps = 27/204 (13%)
Query: 90 KFSDANKLGEGGFGPV---YKGVLKKGDEIAVKRL-PGRSGQGLREMKNEASVIAKVQHK 145
+++ +GEG +G V Y V K +A+K++ P + E ++ + +H+
Sbjct: 44 RYTQLQYIGEGAYGMVSSAYDHVRKT--RVAIKKISPFEHQTYCQRTLREIQILLRFRHE 101
Query: 146 NL-----------------VRLLGCCIDKD-EKILIYEYMPNKSLDFFLFDPTKRMLLDW 187
N+ V ++ ++ D K+L + + N + +FL+ + +
Sbjct: 102 NVIGIRDILRASTLEAMRDVYIVQDLMETDLYKLLKSQQLSNDHICYFLYQILRGLKYIH 161
Query: 188 SANYSSR-LKVSNILLDKDINPKISDFGMARICGGNELQAN-TSRIVGTYGYMSPEYAIQ 245
SAN R LK SN+L++ + KI DFG+ARI + V T Y +PE +
Sbjct: 162 SANVLHRDLKPSNLLINTTCDLKICDFGLARIADPEHDHTGFLTEXVATRWYRAPEIMLN 221
Query: 246 GIFSIKS-DVFSFGVLLLEIVSGK 268
KS D++S G +L E++S +
Sbjct: 222 SKGYTKSIDIWSVGCILAEMLSNR 245
>pdb|2J4Z|A Chain A, Structure Of Aurora-2 In Complex With Pha-680626
pdb|2J4Z|B Chain B, Structure Of Aurora-2 In Complex With Pha-680626
Length = 306
Score = 51.6 bits (122), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 56/205 (27%), Positives = 89/205 (43%), Gaps = 30/205 (14%)
Query: 87 ATNKFSDANKLGEGGFGPVYKGVLKKGDEIAVKRLPGRSG---QGL-REMKNEASVIAKV 142
A F LG+G FG VY K+ I ++ ++ G+ +++ E + + +
Sbjct: 32 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 91
Query: 143 QHKNLVRLLGCCIDKDEKILIYEYMPNKSLDFFL-----FDPTK------RMLLDWSANY 191
+H N++RL G D LI EY P ++ L FD + + S +
Sbjct: 92 RHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCH 151
Query: 192 SSR-----LKVSNILLDKDINPKISDFGMARICGGNELQANTSR---IVGTYGYMSPEYA 243
S R +K N+LL KI+DFG + + A +SR + GT Y+ PE
Sbjct: 152 SKRVIHRDIKPENLLLGSAGELKIADFGWS-------VHAPSSRRTTLCGTLDYLPPEMI 204
Query: 244 IQGIFSIKSDVFSFGVLLLEIVSGK 268
+ K D++S GVL E + GK
Sbjct: 205 EGRMHDEKVDLWSLGVLCYEFLVGK 229
>pdb|2BMC|A Chain A, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|B Chain B, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|C Chain C, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|D Chain D, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|E Chain E, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|F Chain F, Aurora-2 T287d T288d Complexed With Pha-680632
Length = 306
Score = 51.6 bits (122), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 56/205 (27%), Positives = 89/205 (43%), Gaps = 30/205 (14%)
Query: 87 ATNKFSDANKLGEGGFGPVYKGVLKKGDEIAVKRLPGRSG---QGL-REMKNEASVIAKV 142
A F LG+G FG VY K+ I ++ ++ G+ +++ E + + +
Sbjct: 32 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 91
Query: 143 QHKNLVRLLGCCIDKDEKILIYEYMPNKSLDFFL-----FDPTK------RMLLDWSANY 191
+H N++RL G D LI EY P ++ L FD + + S +
Sbjct: 92 RHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCH 151
Query: 192 SSR-----LKVSNILLDKDINPKISDFGMARICGGNELQANTSR---IVGTYGYMSPEYA 243
S R +K N+LL KI+DFG + + A +SR + GT Y+ PE
Sbjct: 152 SKRVIHRDIKPENLLLGSAGELKIADFGWS-------VHAPSSRRDDLCGTLDYLPPEMI 204
Query: 244 IQGIFSIKSDVFSFGVLLLEIVSGK 268
+ K D++S GVL E + GK
Sbjct: 205 EGRMHDEKVDLWSLGVLCYEFLVGK 229
>pdb|2XUU|A Chain A, Crystal Structure Of A Dap-Kinase 1 Mutant
Length = 334
Score = 51.2 bits (121), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 55/207 (26%), Positives = 94/207 (45%), Gaps = 36/207 (17%)
Query: 91 FSDANKLGEGGFGPVYKGVLKK-GDEIAVKRL------PGRSGQGLREMKNEASVIAKVQ 143
+ +LG G F V K K G + A K + R G +++ E S++ ++Q
Sbjct: 13 YDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQ 72
Query: 144 HKNLVRLLGCCIDKDEKILIYEYMPNKSLDFFLFDPTKRMLLDWSAN-----------YS 192
H N++ L +K + ILI E + L F F K L + A Y
Sbjct: 73 HPNVITLHEVYENKTDVILILELVAGGEL--FDFLAEKESLTEEEATEFLKQILNGVYYL 130
Query: 193 SRLKVSN--------ILLDKDI---NPKISDFGMA-RICGGNELQANTSRIVGTYGYMSP 240
L++++ +LLD+++ KI DFG+A +I GNE + I GT +++P
Sbjct: 131 HSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFK----NIFGTPAFVAP 186
Query: 241 EYAIQGIFSIKSDVFSFGVLLLEIVSG 267
E +++D++S GV+ ++SG
Sbjct: 187 EIVNYEPLGLEADMWSIGVITYILLSG 213
>pdb|2Z7Q|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk-1 Bound To Amp-Pcp
pdb|2Z7R|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk1 Bound To Staurosporine
pdb|2Z7S|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk1 Bound To Purvalnol A
Length = 321
Score = 51.2 bits (121), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 31/89 (34%), Positives = 55/89 (61%), Gaps = 3/89 (3%)
Query: 195 LKVSNILLDKDINPKISDFGMARICGGNELQANTSRIVGTYGYMSPEYAIQGIFSIKSDV 254
LK NILLD++ + K++DFG+++ +E +A + GT YM+PE + S +D
Sbjct: 156 LKPENILLDEEGHIKLTDFGLSKEAIDHEKKAYS--FCGTVEYMAPEVVNRQGHSHSADW 213
Query: 255 FSFGVLLLEIVSGK-KTTGFYRTDSLTLL 282
+S+GVL+ E+++G G R +++TL+
Sbjct: 214 WSYGVLMFEMLTGSLPFQGKDRKETMTLI 242
>pdb|2C30|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 6
Length = 321
Score = 51.2 bits (121), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 46/189 (24%), Positives = 86/189 (45%), Gaps = 18/189 (9%)
Query: 96 KLGEGGFGPVYKGVLKK-GDEIAVKRLPGRSGQGLREMKNEASVIAKVQHKNLVRLLGCC 154
K+GEG G V K G ++AVK + R Q + NE ++ QH N+V +
Sbjct: 52 KIGEGSTGIVCLAREKHSGRQVAVKMMDLRKQQRRELLFNEVVIMRDYQHFNVVEMYKSY 111
Query: 155 IDKDEKILIYEYMPNKSLDFFL---------FDPTKRMLLDWSANYSSR------LKVSN 199
+ +E ++ E++ +L + +L A ++ +K +
Sbjct: 112 LVGEELWVLMEFLQGGALTDIVSQVRLNEEQIATVCEAVLQALAYLHAQGVIHRDIKSDS 171
Query: 200 ILLDKDINPKISDFGMARICGGNELQANTSRIVGTYGYMSPEYAIQGIFSIKSDVFSFGV 259
ILL D K+SDFG + +VGT +M+PE + +++ + D++S G+
Sbjct: 172 ILLTLDGRVKLSDFGFCAQISKD--VPKRKXLVGTPYWMAPEVISRSLYATEVDIWSLGI 229
Query: 260 LLLEIVSGK 268
+++E+V G+
Sbjct: 230 MVIEMVDGE 238
>pdb|3QBN|A Chain A, Structure Of Human Aurora A In Complex With A
Diaminopyrimidine
Length = 281
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 55/208 (26%), Positives = 88/208 (42%), Gaps = 36/208 (17%)
Query: 87 ATNKFSDANKLGEGGFGPVYKGVLKKGDEIAVKRLPGRSG---QGL-REMKNEASVIAKV 142
A F LG+G FG VY K+ I ++ ++ G+ +++ E + + +
Sbjct: 7 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 66
Query: 143 QHKNLVRLLGCCIDKDEKILIYEYMPNKSLDFFL-----FDPTKRMLLDWSANYSSRLK- 196
+H N++RL G D LI EY P ++ L FD + +A Y + L
Sbjct: 67 RHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQR------TATYITELAN 120
Query: 197 -----VSNILLDKDINP-----------KISDFGMARICGGNELQANTSRIVGTYGYMSP 240
S ++ +DI P KI+DFG + C + T + GT Y+ P
Sbjct: 121 ALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWS--CHAPSSRRTT--LSGTLDYLPP 176
Query: 241 EYAIQGIFSIKSDVFSFGVLLLEIVSGK 268
E + K D++S GVL E + GK
Sbjct: 177 EMIEGRMHDEKVDLWSLGVLCYEFLVGK 204
>pdb|3COH|A Chain A, Crystal Structure Of Aurora-A In Complex With A
Pentacyclic Inhibitor
pdb|3COH|B Chain B, Crystal Structure Of Aurora-A In Complex With A
Pentacyclic Inhibitor
Length = 268
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 56/211 (26%), Positives = 89/211 (42%), Gaps = 42/211 (19%)
Query: 87 ATNKFSDANKLGEGGFGPVYKGVLKKGDEIAVKRLPGRSG---QGL-REMKNEASVIAKV 142
A F LG+G FG VY K I ++ ++ G+ +++ E + + +
Sbjct: 6 ALEDFEIGRPLGKGKFGNVYLAREKNSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 65
Query: 143 QHKNLVRLLGCCIDKDEKILIYEYMPNKSLDFFL-----FDPTKRMLLDWSANYSSRLK- 196
+H N++RL G D LI EY P ++ L FD + +A Y + L
Sbjct: 66 RHPNILRLYGYFHDSTRVYLILEYAPLGTVYRELQKLSKFDEQR------TATYITELAN 119
Query: 197 -----VSNILLDKDINP-----------KISDFGMARICGGNELQANTSR---IVGTYGY 237
S ++ +DI P KI+DFG + + A +SR + GT Y
Sbjct: 120 ALSYCHSKKVIHRDIKPENLLLGSAGELKIADFGWS-------VHAPSSRRAALCGTLDY 172
Query: 238 MSPEYAIQGIFSIKSDVFSFGVLLLEIVSGK 268
+ PE + K D++S GVL E + GK
Sbjct: 173 LPPEMIEGRMHDEKVDLWSLGVLCYEFLVGK 203
>pdb|2F57|A Chain A, Crystal Structure Of The Human P21-activated Kinase 5
pdb|2F57|B Chain B, Crystal Structure Of The Human P21-activated Kinase 5
Length = 317
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 47/192 (24%), Positives = 84/192 (43%), Gaps = 24/192 (12%)
Query: 96 KLGEGGFGPVYKGVLKK-GDEIAVKRLPGRSGQGLREMKNEASVIAKVQHKNLVRLLGCC 154
K+GEG G V K G ++AVK++ R Q + NE ++ H N+V +
Sbjct: 52 KIGEGSTGIVCIATEKHTGKQVAVKKMDLRKQQRRELLFNEVVIMRDYHHDNVVDMYSSY 111
Query: 155 IDKDEKILIYEYMPNKSLDFFLFDPTKRM-----------------LLDWSANYSSRLKV 197
+ DE ++ E++ +L + RM L +K
Sbjct: 112 LVGDELWVVMEFLEGGALTDIVTH--TRMNEEQIATVCLSVLRALSYLHNQGVIHRDIKS 169
Query: 198 SNILLDKDINPKISDFGMARICGGNELQANTSR-IVGTYGYMSPEYAIQGIFSIKSDVFS 256
+ILL D K+SDFG C + + +VGT +M+PE + + + D++S
Sbjct: 170 DSILLTSDGRIKLSDFG---FCAQVSKEVPKRKXLVGTPYWMAPEVISRLPYGTEVDIWS 226
Query: 257 FGVLLLEIVSGK 268
G++++E++ G+
Sbjct: 227 LGIMVIEMIDGE 238
>pdb|3KK8|A Chain A, Camkii Substrate Complex A
Length = 284
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 56/210 (26%), Positives = 99/210 (47%), Gaps = 37/210 (17%)
Query: 88 TNKFSD----ANKLGEGGFGPVYKGVLKK-GDEIAVKRLPGR--SGQGLREMKNEASVIA 140
+ KFSD +LG+G F V + V K G E A K + + S + ++++ EA +
Sbjct: 1 STKFSDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICR 60
Query: 141 KVQHKNLVRLLGCCIDKDEKILIYEYMPNKSL-------DFF----LFDPTKRMLLDWSA 189
K+QH N+VRL ++ L+++ + L +F+ +++L +
Sbjct: 61 KLQHPNIVRLHDSIQEESFHYLVFDLVTGGELFEDIVAREFYSEADASHCIQQILESIAY 120
Query: 190 NYSS-----RLKVSNILL---DKDINPKISDFGMARICGGNELQANTSR----IVGTYGY 237
+S+ LK N+LL K K++DFG+A ++ N S GT GY
Sbjct: 121 CHSNGIVHRNLKPENLLLASKAKGAAVKLADFGLA-------IEVNDSEAWHGFAGTPGY 173
Query: 238 MSPEYAIQGIFSIKSDVFSFGVLLLEIVSG 267
+SPE + +S D+++ GV+L ++ G
Sbjct: 174 LSPEVLKKDPYSKPVDIWACGVILYILLVG 203
>pdb|3T8O|A Chain A, Rhodopsin Kinase (grk1) L166k Mutant At 2.5a Resolution
Length = 543
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 51/204 (25%), Positives = 88/204 (43%), Gaps = 30/204 (14%)
Query: 91 FSDANKLGEGGFGPVYKGVLKKGDEI----AVKRLPGRSGQGLREMKNEASVIAKVQHKN 146
F D LG GGFG V+ +K ++ + + + +G + E ++AKV +
Sbjct: 187 FLDFRVLGRGGFGEVFACQMKATGKLYACKKLNKKRLKKRKGYQGAMVEKKILAKVHSRF 246
Query: 147 LVRLLGCCIDKDEKILIYEYMPNKSLDFFLFDPTK--------RMLLDWSANYSS----- 193
+V L K + L+ M + + +++ + R + ++A S
Sbjct: 247 IVSLAYAFETKTDLCLVMTIMNGGDIRYHIYNVDEDNPGFQEPRAIF-YTAQIVSGLEHL 305
Query: 194 --------RLKVSNILLDKDINPKISDFGMA-RICGGNELQANTSRIVGTYGYMSPEYAI 244
LK N+LLD D N +ISD G+A + G Q T GT G+M+PE +
Sbjct: 306 HQRNIIYRDLKPENVLLDDDGNVRISDLGLAVELKAG---QTKTKGYAGTPGFMAPELLL 362
Query: 245 QGIFSIKSDVFSFGVLLLEIVSGK 268
+ D F+ GV L E+++ +
Sbjct: 363 GEEYDFSVDYFALGVTLYEMIAAR 386
>pdb|3C4X|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.9a
pdb|3C4X|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.9a
pdb|3C4Y|A Chain A, Crystal Structure Of Apo Form Of G Protein Coupled
Receptor Kinase 1 At 7.51a
pdb|3C4Y|B Chain B, Crystal Structure Of Apo Form Of G Protein Coupled
Receptor Kinase 1 At 7.51a
pdb|3C4Z|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 1.84a
pdb|3C50|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 2.6a
pdb|3C50|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 2.6a
pdb|3C51|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 3.55a
pdb|3C51|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 3.55a
Length = 543
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 51/204 (25%), Positives = 88/204 (43%), Gaps = 30/204 (14%)
Query: 91 FSDANKLGEGGFGPVYKGVLKKGDEI----AVKRLPGRSGQGLREMKNEASVIAKVQHKN 146
F D LG GGFG V+ +K ++ + + + +G + E ++AKV +
Sbjct: 187 FLDFRVLGRGGFGEVFACQMKATGKLYACKKLNKKRLKKRKGYQGAMVEKKILAKVHSRF 246
Query: 147 LVRLLGCCIDKDEKILIYEYMPNKSLDFFLFDPTK--------RMLLDWSANYSS----- 193
+V L K + L+ M + + +++ + R + ++A S
Sbjct: 247 IVSLAYAFETKTDLCLVMTIMNGGDIRYHIYNVDEDNPGFQEPRAIF-YTAQIVSGLEHL 305
Query: 194 --------RLKVSNILLDKDINPKISDFGMA-RICGGNELQANTSRIVGTYGYMSPEYAI 244
LK N+LLD D N +ISD G+A + G Q T GT G+M+PE +
Sbjct: 306 HQRNIIYRDLKPENVLLDDDGNVRISDLGLAVELKAG---QTKTKGYAGTPGFMAPELLL 362
Query: 245 QGIFSIKSDVFSFGVLLLEIVSGK 268
+ D F+ GV L E+++ +
Sbjct: 363 GEEYDFSVDYFALGVTLYEMIAAR 386
>pdb|3ORM|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain D76a Mutant
Length = 311
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 27/76 (35%), Positives = 45/76 (59%), Gaps = 3/76 (3%)
Query: 195 LKVSNILLDKDINPKISDFGMARICG--GNELQANTSRIVGTYGYMSPEYAIQGIFSIKS 252
+K +NI++ K+ DFG+AR GN + T+ ++GT Y+SPE A +S
Sbjct: 142 VKPANIMISATNAVKVMDFGIARAIADSGNSVT-QTAAVIGTAQYLSPEQARGDSVDARS 200
Query: 253 DVFSFGVLLLEIVSGK 268
DV+S G +L E+++G+
Sbjct: 201 DVYSLGCVLYEVLTGE 216
>pdb|3F61|A Chain A, Crystal Structure Of M. Tuberculosis Pknb
Leu33aspVAL222ASP DOUBLE MUTANT IN COMPLEX WITH ADP
Length = 311
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 27/76 (35%), Positives = 45/76 (59%), Gaps = 3/76 (3%)
Query: 195 LKVSNILLDKDINPKISDFGMARICG--GNELQANTSRIVGTYGYMSPEYAIQGIFSIKS 252
+K +NI++ K+ DFG+AR GN + T+ ++GT Y+SPE A +S
Sbjct: 142 VKPANIMISATNAVKVMDFGIARAIADSGNSV-TQTAAVIGTAQYLSPEQARGDSVDARS 200
Query: 253 DVFSFGVLLLEIVSGK 268
DV+S G +L E+++G+
Sbjct: 201 DVYSLGCVLYEVLTGE 216
>pdb|3ORI|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|B Chain B, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|C Chain C, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|D Chain D, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORK|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 2)
pdb|3ORL|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 3)
pdb|3ORO|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 4)
pdb|3ORP|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 5)
pdb|3ORT|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 6)
Length = 311
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 27/76 (35%), Positives = 45/76 (59%), Gaps = 3/76 (3%)
Query: 195 LKVSNILLDKDINPKISDFGMARICG--GNELQANTSRIVGTYGYMSPEYAIQGIFSIKS 252
+K +NI++ K+ DFG+AR GN + T+ ++GT Y+SPE A +S
Sbjct: 142 VKPANIMISATNAVKVMDFGIARAIADSGNSV-TQTAAVIGTAQYLSPEQARGDSVDARS 200
Query: 253 DVFSFGVLLLEIVSGK 268
DV+S G +L E+++G+
Sbjct: 201 DVYSLGCVLYEVLTGE 216
>pdb|3QC9|A Chain A, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|B Chain B, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|C Chain C, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|D Chain D, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
Length = 543
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 51/204 (25%), Positives = 88/204 (43%), Gaps = 30/204 (14%)
Query: 91 FSDANKLGEGGFGPVYKGVLKKGDEI----AVKRLPGRSGQGLREMKNEASVIAKVQHKN 146
F D LG GGFG V+ +K ++ + + + +G + E ++AKV +
Sbjct: 187 FLDFRVLGRGGFGEVFACQMKATGKLYACKKLNKKRLKKRKGYQGAMVEKKILAKVHSRF 246
Query: 147 LVRLLGCCIDKDEKILIYEYMPNKSLDFFLFDPTK--------RMLLDWSANYSS----- 193
+V L K + L+ M + + +++ + R + ++A S
Sbjct: 247 IVSLAYAFETKTDLCLVMTIMNGGDIRYHIYNVDEDNPGFQEPRAIF-YTAQIVSGLEHL 305
Query: 194 --------RLKVSNILLDKDINPKISDFGMA-RICGGNELQANTSRIVGTYGYMSPEYAI 244
LK N+LLD D N +ISD G+A + G Q T GT G+M+PE +
Sbjct: 306 HQRNIIYRDLKPENVLLDDDGNVRISDLGLAVELKAG---QTKTKGYAGTPGFMAPELLL 362
Query: 245 QGIFSIKSDVFSFGVLLLEIVSGK 268
+ D F+ GV L E+++ +
Sbjct: 363 GEEYDFSVDYFALGVTLYEMIAAR 386
>pdb|3C4W|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.7a
pdb|3C4W|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.7a
Length = 543
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 51/204 (25%), Positives = 88/204 (43%), Gaps = 30/204 (14%)
Query: 91 FSDANKLGEGGFGPVYKGVLKKGDEI----AVKRLPGRSGQGLREMKNEASVIAKVQHKN 146
F D LG GGFG V+ +K ++ + + + +G + E ++AKV +
Sbjct: 187 FLDFRVLGRGGFGEVFACQMKATGKLYACKKLNKKRLKKRKGYQGAMVEKKILAKVHSRF 246
Query: 147 LVRLLGCCIDKDEKILIYEYMPNKSLDFFLFDPTK--------RMLLDWSANYSS----- 193
+V L K + L+ M + + +++ + R + ++A S
Sbjct: 247 IVSLAYAFETKTDLCLVMTIMNGGDIRYHIYNVDEDNPGFQEPRAIF-YTAQIVSGLEHL 305
Query: 194 --------RLKVSNILLDKDINPKISDFGMA-RICGGNELQANTSRIVGTYGYMSPEYAI 244
LK N+LLD D N +ISD G+A + G Q T GT G+M+PE +
Sbjct: 306 HQRNIIYRDLKPENVLLDDDGNVRISDLGLAVELKAG---QTKTKGYAGTPGFMAPELLL 362
Query: 245 QGIFSIKSDVFSFGVLLLEIVSGK 268
+ D F+ GV L E+++ +
Sbjct: 363 GEEYDFSVDYFALGVTLYEMIAAR 386
>pdb|2DWB|A Chain A, Aurora-A Kinase Complexed With Amppnp
Length = 285
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 56/211 (26%), Positives = 89/211 (42%), Gaps = 42/211 (19%)
Query: 87 ATNKFSDANKLGEGGFGPVYKGVLKKGDEIAVKRLPGRSG---QGL-REMKNEASVIAKV 142
A F LG+G FG VY K+ I ++ ++ G+ +++ E + + +
Sbjct: 11 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 70
Query: 143 QHKNLVRLLGCCIDKDEKILIYEYMPNKSLDFFL-----FDPTKRMLLDWSANYSSRLK- 196
+H N++RL G D LI EY P ++ L FD + +A Y + L
Sbjct: 71 RHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQR------TATYITELAN 124
Query: 197 -----VSNILLDKDINP-----------KISDFGMARICGGNELQANTSR---IVGTYGY 237
S ++ +DI P KI+DFG + + A +SR + GT Y
Sbjct: 125 ALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWS-------VHAPSSRRTTLCGTLDY 177
Query: 238 MSPEYAIQGIFSIKSDVFSFGVLLLEIVSGK 268
+ PE K D++S GVL E + GK
Sbjct: 178 LPPEXIEGRXHDEKVDLWSLGVLCYEFLVGK 208
>pdb|1MRU|A Chain A, Intracellular SerTHR PROTEIN KINASE DOMAIN OF
Mycobacterium Tuberculosis Pknb.
pdb|1MRU|B Chain B, Intracellular SerTHR PROTEIN KINASE DOMAIN OF
Mycobacterium Tuberculosis Pknb
Length = 311
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 27/76 (35%), Positives = 45/76 (59%), Gaps = 3/76 (3%)
Query: 195 LKVSNILLDKDINPKISDFGMARICG--GNELQANTSRIVGTYGYMSPEYAIQGIFSIKS 252
+K +NI++ K+ DFG+AR GN + T+ ++GT Y+SPE A +S
Sbjct: 142 VKPANIMISATNAVKVMDFGIARAIADSGNSV-TQTAAVIGTAQYLSPEQARGDSVDARS 200
Query: 253 DVFSFGVLLLEIVSGK 268
DV+S G +L E+++G+
Sbjct: 201 DVYSLGCVLYEVLTGE 216
>pdb|3PJC|A Chain A, Crystal Structure Of Jak3 Complexed With A Potent Atp Site
Inhibitor Showing High Selectivity Within The Janus
Kinase Family
Length = 315
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 70/280 (25%), Positives = 120/280 (42%), Gaps = 44/280 (15%)
Query: 95 NKLGEGGFGPV----YKGVLKK-GDEIAVKRLPGRSGQGLREMKNEASVIAKVQHKNLVR 149
++LG+G FG V Y + G +AVK+L R+ + E ++ + +V+
Sbjct: 17 SQLGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQQRDFQREIQILKALHSDFIVK 76
Query: 150 LLGCCIDKDEKIL--IYEYMPNKSLDFFLFDPTKRMLLDWSANYSSR------------- 194
G + L + EY+P+ L FL R+ YSS+
Sbjct: 77 YRGVSYGPGRQSLRLVMEYLPSGCLRDFLQRHRARLDASRLLLYSSQICKGMEYLGSRRC 136
Query: 195 ----LKVSNILLDKDINPKISDFGMARICGGNE-----LQANTSRIVGTYGYMSPEYAIQ 245
L NIL++ + + KI+DFG+A++ ++ + S I + +PE
Sbjct: 137 VHRDLAARNILVESEAHVKIADFGLAKLLPLDKDYYVVREPGQSPIF----WYAPESLSD 192
Query: 246 GIFSIKSDVFSFGVLLLEIVSGKKTTGFYRTDSLTLLGYAWDLWTSNRTLELID-----P 300
IFS +SDV+SFGV+L E+ + + + L ++G D+ R LEL++ P
Sbjct: 193 NIFSRQSDVWSFGVVLYELFTYCDKSCSPSAEFLRMMGCERDVPALCRLLELLEEGQRLP 252
Query: 301 ILEDEYSSKHMLLRYVNIALLCVQESADDRPTMNEVVSML 340
+ H L++ LC S DRP+ + + L
Sbjct: 253 APPACPAEVHELMK------LCWAPSPQDRPSFSALGPQL 286
>pdb|4AGU|A Chain A, Crystal Structure Of The Human Cdkl1 Kinase Domain
pdb|4AGU|B Chain B, Crystal Structure Of The Human Cdkl1 Kinase Domain
pdb|4AGU|C Chain C, Crystal Structure Of The Human Cdkl1 Kinase Domain
Length = 311
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 53/203 (26%), Positives = 91/203 (44%), Gaps = 30/203 (14%)
Query: 89 NKFSDANKLGEGGFGPVYKGVLKK-GDEIAVKRL------PGRSGQGLREMKNEASVIAK 141
K+ K+GEG +G V+K + G +A+K+ P LRE++ ++ +
Sbjct: 3 EKYEKIGKIGEGSYGVVFKCRNRDTGQIVAIKKFLESEDDPVIKKIALREIR----MLKQ 58
Query: 142 VQHKNLVRLLGCCIDKDEKILIYEYMPN---KSLDFFLFDPTKRML--LDW----SANYS 192
++H NLV LL K L++EY + LD + + ++ + W + N+
Sbjct: 59 LKHPNLVNLLEVFRRKRRLHLVFEYCDHTVLHELDRYQRGVPEHLVKSITWQTLQAVNFC 118
Query: 193 SR-------LKVSNILLDKDINPKISDFGMARICGGNELQANTSRIVGTYGYMSPEYAIQ 245
+ +K NIL+ K K+ DFG AR+ G + V T Y SPE +
Sbjct: 119 HKHNCIHRDVKPENILITKHSVIKLCDFGFARLLTGPSDYYDDE--VATRWYRSPELLVG 176
Query: 246 GI-FSIKSDVFSFGVLLLEIVSG 267
+ DV++ G + E++SG
Sbjct: 177 DTQYGPPVDVWAIGCVFAELLSG 199
>pdb|3KL8|A Chain A, Camkiintide Inhibitor Complex
pdb|3KL8|C Chain C, Camkiintide Inhibitor Complex
pdb|3KL8|E Chain E, Camkiintide Inhibitor Complex
pdb|3KL8|G Chain G, Camkiintide Inhibitor Complex
pdb|3KL8|I Chain I, Camkiintide Inhibitor Complex
Length = 269
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 56/210 (26%), Positives = 99/210 (47%), Gaps = 37/210 (17%)
Query: 88 TNKFSD----ANKLGEGGFGPVYKGVLKK-GDEIAVKRLPGR--SGQGLREMKNEASVIA 140
+ KFSD +LG+G F V + V K G E A K + + S + ++++ EA +
Sbjct: 1 STKFSDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICR 60
Query: 141 KVQHKNLVRLLGCCIDKDEKILIYEYMPNKSL-------DFF----LFDPTKRMLLDWSA 189
K+QH N+VRL ++ L+++ + L +F+ +++L +
Sbjct: 61 KLQHPNIVRLHDSIQEESFHYLVFDLVTGGELFEDIVAREFYSEADASHCIQQILESIAY 120
Query: 190 NYSS-----RLKVSNILL---DKDINPKISDFGMARICGGNELQANTSR----IVGTYGY 237
+S+ LK N+LL K K++DFG+A ++ N S GT GY
Sbjct: 121 CHSNGIVHRNLKPENLLLASKAKGAAVKLADFGLA-------IEVNDSEAWHGFAGTPGY 173
Query: 238 MSPEYAIQGIFSIKSDVFSFGVLLLEIVSG 267
+SPE + +S D+++ GV+L ++ G
Sbjct: 174 LSPEVLKKDPYSKPVDIWACGVILYILLVG 203
>pdb|1CM8|A Chain A, Phosphorylated Map Kinase P38-Gamma
pdb|1CM8|B Chain B, Phosphorylated Map Kinase P38-Gamma
Length = 367
Score = 50.4 bits (119), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 52/217 (23%), Positives = 98/217 (45%), Gaps = 33/217 (15%)
Query: 91 FSDANKLGEGGFGPVYKGV-LKKGDEIAVKRL--PGRSGQGLREMKNEASVIAKVQHKNL 147
+ D +G G +G V V + G ++A+K+L P +S + E ++ ++H+N+
Sbjct: 27 YRDLQPVGSGAYGAVCSAVDGRTGAKVAIKKLYRPFQSELFAKRAYRELRLLKHMRHENV 86
Query: 148 VRLLGCCIDKDE--------------------KILIYEYMPNKSLDFFLFDPTKRMLLDW 187
+ LL DE K++ +E + + F ++ K +
Sbjct: 87 IGLLDV-FTPDETLDDFTDFYLVMPFMGTDLGKLMKHEKLGEDRIQFLVYQMLKGLRYIH 145
Query: 188 SANYSSR-LKVSNILLDKDINPKISDFGMARICGGNELQANTSRIVGTYGYMSPEYAIQG 246
+A R LK N+ +++D KI DFG+AR + + V T Y +PE +
Sbjct: 146 AAGIIHRDLKPGNLAVNEDCELKILDFGLAR-----QADSEMXGXVVTRWYRAPEVILNW 200
Query: 247 I-FSIKSDVFSFGVLLLEIVSGKKTTGFYRTDSLTLL 282
+ ++ D++S G ++ E+++GK T F +D L L
Sbjct: 201 MRYTQTVDIWSVGCIMAEMITGK--TLFKGSDHLDQL 235
>pdb|3VUL|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M1 In Map
Kinase Jnk1
Length = 370
Score = 50.4 bits (119), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 51/209 (24%), Positives = 93/209 (44%), Gaps = 29/209 (13%)
Query: 83 SVSTATNKFSDANKLGEGGFGPV---YKGVLKKGDEIAVKRL--PGRSGQGLREMKNEAS 137
S T ++ + +G G G V Y +L++ +A+K+L P ++ + E
Sbjct: 18 STFTVLKRYQNLKPIGSGAQGIVCAAYDAILERN--VAIKKLSRPFQNQTHAKRAYRELV 75
Query: 138 VIAKVQHKNLVRLLGC------------------CIDKDEKILIYEYMPNKSLDFFLFDP 179
++ V HKN++ LL +D + +I + ++ + + L+
Sbjct: 76 LMKVVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLSQVIQMELDHERMSYLLYQM 135
Query: 180 TKRMLLDWSANYSSR-LKVSNILLDKDINPKISDFGMARICGGNELQANTSRIVGTYGYM 238
+ SA R LK SNI++ D KI DFG+AR G + + T +V Y Y
Sbjct: 136 LVGIKHLHSAGIIHRDLKPSNIVVKSDATLKILDFGLARTAGTSFMM--TPYVVTRY-YR 192
Query: 239 SPEYAIQGIFSIKSDVFSFGVLLLEIVSG 267
+PE + + D++S GV++ E++ G
Sbjct: 193 APEVILGMGYKENVDIWSVGVIMGEMIKG 221
>pdb|3VUM|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M7 In Map
Kinase Jnk1
Length = 370
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 51/209 (24%), Positives = 93/209 (44%), Gaps = 29/209 (13%)
Query: 83 SVSTATNKFSDANKLGEGGFGPV---YKGVLKKGDEIAVKRL--PGRSGQGLREMKNEAS 137
S T ++ + +G G G V Y +L++ +A+K+L P ++ + E
Sbjct: 18 STFTVLKRYQNLKPIGSGAQGIVVAAYDAILERN--VAIKKLSRPFQNQTHAKRAYRELV 75
Query: 138 VIAKVQHKNLVRLLGC------------------CIDKDEKILIYEYMPNKSLDFFLFDP 179
++ V HKN++ LL +D + +I + ++ + + L+
Sbjct: 76 LMKVVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLSQVIQMELDHERMSYLLYQM 135
Query: 180 TKRMLLDWSANYSSR-LKVSNILLDKDINPKISDFGMARICGGNELQANTSRIVGTYGYM 238
+ SA R LK SNI++ D KI DFG+AR G + + T +V Y Y
Sbjct: 136 LVGIKHLHSAGIIHRDLKPSNIVVKSDATLKILDFGLARTAGTSFMM--TPYVVTRY-YR 192
Query: 239 SPEYAIQGIFSIKSDVFSFGVLLLEIVSG 267
+PE + + D++S GV++ E++ G
Sbjct: 193 APEVILGMGYKENVDIWSVGVIMGEMIKG 221
>pdb|3KK9|A Chain A, Camkii Substrate Complex B
Length = 282
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 56/208 (26%), Positives = 98/208 (47%), Gaps = 37/208 (17%)
Query: 90 KFSD----ANKLGEGGFGPVYKGVLKK-GDEIAVKRLPGR--SGQGLREMKNEASVIAKV 142
KFSD +LG+G F V + V K G E A K + + S + ++++ EA + K+
Sbjct: 2 KFSDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKL 61
Query: 143 QHKNLVRLLGCCIDKDEKILIYEYMPNKSL-------DFF----LFDPTKRMLLDWSANY 191
QH N+VRL ++ L+++ + L +F+ +++L + +
Sbjct: 62 QHPNIVRLHDSIQEESFHYLVFDLVTGGELFEDIVAREFYSEADASHCIQQILESIAYCH 121
Query: 192 SS-----RLKVSNILL---DKDINPKISDFGMARICGGNELQANTSR----IVGTYGYMS 239
S+ LK N+LL K K++DFG+A ++ N S GT GY+S
Sbjct: 122 SNGIVHRNLKPENLLLASKAKGAAVKLADFGLA-------IEVNDSEAWHGFAGTPGYLS 174
Query: 240 PEYAIQGIFSIKSDVFSFGVLLLEIVSG 267
PE + +S D+++ GV+L ++ G
Sbjct: 175 PEVLKKDPYSKPVDIWACGVILYILLVG 202
>pdb|1O6Y|A Chain A, Catalytic Domain Of Pknb Kinase From Mycobacterium
Tuberculosis
pdb|2FUM|A Chain A, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|B Chain B, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|C Chain C, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|D Chain D, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
Length = 299
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 27/76 (35%), Positives = 45/76 (59%), Gaps = 3/76 (3%)
Query: 195 LKVSNILLDKDINPKISDFGMARICG--GNELQANTSRIVGTYGYMSPEYAIQGIFSIKS 252
+K +NI++ K+ DFG+AR GN + T+ ++GT Y+SPE A +S
Sbjct: 159 VKPANIMISATNAVKVMDFGIARAIADSGNSV-TQTAAVIGTAQYLSPEQARGDSVDARS 217
Query: 253 DVFSFGVLLLEIVSGK 268
DV+S G +L E+++G+
Sbjct: 218 DVYSLGCVLYEVLTGE 233
>pdb|4DC2|A Chain A, Structure Of Pkc In Complex With A Substrate Peptide From
Par-3
Length = 396
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 51/210 (24%), Positives = 86/210 (40%), Gaps = 27/210 (12%)
Query: 82 SSVSTATNKFSDANKLGEGGFGPVYKGVLKKGDEIAVKRLPGRS----GQGLREMKNEAS 137
+S S F +G G + V LKK D I R+ + + + ++ E
Sbjct: 45 ASSSLGLQDFDLLRVIGRGSYAKVLLVRLKKTDRIYAMRVVKKELVNDDEDIDWVQTEKH 104
Query: 138 VIAKV-QHKNLVRLLGCCIDKDEKILIYEYMPNKSLDFFLFDPTKRMLLDWSANYSSR-- 194
V + H LV L C + + EY+ L F + +R L + A + S
Sbjct: 105 VFEQASNHPFLVGLHSCFQTESRLFFVIEYVNGGDLMFHM--QRQRKLPEEHARFYSAEI 162
Query: 195 ----------------LKVSNILLDKDINPKISDFGMARICGGNELQANTSRIVGTYGYM 238
LK+ N+LLD + + K++D+GM + G TS GT Y+
Sbjct: 163 SLALNYLHERGIIYRDLKLDNVLLDSEGHIKLTDYGMCK--EGLRPGDTTSTFCGTPNYI 220
Query: 239 SPEYAIQGIFSIKSDVFSFGVLLLEIVSGK 268
+PE + D ++ GVL+ E+++G+
Sbjct: 221 APEILRGEDYGFSVDWWALGVLMFEMMAGR 250
>pdb|2XNE|A Chain A, Structure Of Aurora-A Bound To An Imidazopyrazine
Inhibitor
Length = 272
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 54/204 (26%), Positives = 89/204 (43%), Gaps = 28/204 (13%)
Query: 87 ATNKFSDANKLGEGGFGPVYKGVLKKGDEIAVKRLPGRSG---QGL-REMKNEASVIAKV 142
A F LG+G FG VY K+ I ++ ++ G+ +++ E + + +
Sbjct: 9 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 68
Query: 143 QHKNLVRLLGCCIDKDEKILIYEYMPNKSLDFFL-----FDPTKRMLLDWSANYSSRLK- 196
+H N++RL G D LI EY P ++ L FD + +A Y + L
Sbjct: 69 RHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQR------TATYITELAN 122
Query: 197 -----VSNILLDKDINPK---ISDFGMARICG-GNELQANTSR---IVGTYGYMSPEYAI 244
S ++ +DI P+ + G +I G + A +SR + GT Y+ PE
Sbjct: 123 ALSYCHSKRVIHRDIKPENLLLGSAGELKIANFGWSVHAPSSRRTTLCGTLDYLPPEMIE 182
Query: 245 QGIFSIKSDVFSFGVLLLEIVSGK 268
+ K D++S GVL E + GK
Sbjct: 183 GRMHDEKVDLWSLGVLCYEFLVGK 206
>pdb|1ZRZ|A Chain A, Crystal Structure Of The Catalytic Domain Of Atypical
Protein Kinase C-Iota
Length = 364
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 52/210 (24%), Positives = 86/210 (40%), Gaps = 27/210 (12%)
Query: 82 SSVSTATNKFSDANKLGEGGFGPVYKGVLKKGDEI----AVKRLPGRSGQGLREMKNEAS 137
+S S F +G G + V LKK D I VK+ + + ++ E
Sbjct: 13 ASSSLGLQDFDLLRVIGRGSYAKVLLVRLKKTDRIYAMKVVKKELVNDDEDIDWVQTEKH 72
Query: 138 VIAKV-QHKNLVRLLGCCIDKDEKILIYEYMPNKSLDFFLFDPTKRMLLDWSANYSSR-- 194
V + H LV L C + + EY+ L F + +R L + A + S
Sbjct: 73 VFEQASNHPFLVGLHSCFQTESRLFFVIEYVNGGDLMFHM--QRQRKLPEEHARFYSAEI 130
Query: 195 ----------------LKVSNILLDKDINPKISDFGMARICGGNELQANTSRIVGTYGYM 238
LK+ N+LLD + + K++D+GM + G TS GT Y+
Sbjct: 131 SLALNYLHERGIIYRDLKLDNVLLDSEGHIKLTDYGMCK--EGLRPGDTTSXFCGTPNYI 188
Query: 239 SPEYAIQGIFSIKSDVFSFGVLLLEIVSGK 268
+PE + D ++ GVL+ E+++G+
Sbjct: 189 APEILRGEDYGFSVDWWALGVLMFEMMAGR 218
>pdb|2X0G|A Chain A, X-ray Structure Of A Dap-kinase Calmodulin Complex
Length = 334
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 55/207 (26%), Positives = 94/207 (45%), Gaps = 36/207 (17%)
Query: 91 FSDANKLGEGGFGPVYKGVLKK-GDEIAVKRL------PGRSGQGLREMKNEASVIAKVQ 143
+ +LG G F V K K G + A K + R G +++ E S++ ++Q
Sbjct: 13 YDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQ 72
Query: 144 HKNLVRLLGCCIDKDEKILIYEYMPNKSLDFFLFDPTKRMLLDWSAN-----------YS 192
H N++ L +K + ILI E + L F F K L + A Y
Sbjct: 73 HPNVITLHEVYENKTDVILILELVAGGEL--FDFLAEKESLTEEEATEFLKQILNGVYYL 130
Query: 193 SRLKVSN--------ILLDKDI---NPKISDFGMA-RICGGNELQANTSRIVGTYGYMSP 240
L++++ +LLD+++ KI DFG+A +I GNE + I GT +++P
Sbjct: 131 HSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFK----NIFGTPEFVAP 186
Query: 241 EYAIQGIFSIKSDVFSFGVLLLEIVSG 267
E +++D++S GV+ ++SG
Sbjct: 187 EIVNYEPLGLEADMWSIGVITYILLSG 213
>pdb|1OL6|A Chain A, Structure Of Unphosphorylated D274n Mutant Of Aurora-a
Length = 282
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 55/211 (26%), Positives = 90/211 (42%), Gaps = 42/211 (19%)
Query: 87 ATNKFSDANKLGEGGFGPVYKGVLKKGDEIAVKRLPGRSG---QGL-REMKNEASVIAKV 142
A F LG+G FG VY K+ I ++ ++ G+ +++ E + + +
Sbjct: 8 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 67
Query: 143 QHKNLVRLLGCCIDKDEKILIYEYMPNKSLDFFL-----FDPTKRMLLDWSANYSSRLK- 196
+H N++RL G D LI EY P ++ L FD + +A Y + L
Sbjct: 68 RHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQR------TATYITELAN 121
Query: 197 -----VSNILLDKDINP-----------KISDFGMARICGGNELQANTSR---IVGTYGY 237
S ++ +DI P KI++FG + + A +SR + GT Y
Sbjct: 122 ALSYCHSKRVIHRDIKPENLLLGSAGELKIANFGWS-------VHAPSSRRTTLCGTLDY 174
Query: 238 MSPEYAIQGIFSIKSDVFSFGVLLLEIVSGK 268
+ PE + K D++S GVL E + GK
Sbjct: 175 LPPEMIEGRMHDEKVDLWSLGVLCYEFLVGK 205
>pdb|1P4F|A Chain A, Death Associated Protein Kinase Catalytic Domain With
Bound Inhibitor Fragment
Length = 293
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 55/207 (26%), Positives = 94/207 (45%), Gaps = 36/207 (17%)
Query: 91 FSDANKLGEGGFGPVYKGVLKK-GDEIAVKRL------PGRSGQGLREMKNEASVIAKVQ 143
+ +LG G F V K K G + A K + R G +++ E S++ ++Q
Sbjct: 12 YDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQ 71
Query: 144 HKNLVRLLGCCIDKDEKILIYEYMPNKSLDFFLFDPTKRMLLDWSAN-----------YS 192
H N++ L +K + ILI E + L F F K L + A Y
Sbjct: 72 HPNVITLHEVYENKTDVILILELVAGGEL--FDFLAEKESLTEEEATEFLKQILNGVYYL 129
Query: 193 SRLKVSN--------ILLDKDI---NPKISDFGMA-RICGGNELQANTSRIVGTYGYMSP 240
L++++ +LLD+++ KI DFG+A +I GNE + I GT +++P
Sbjct: 130 HSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFK----NIFGTPEFVAP 185
Query: 241 EYAIQGIFSIKSDVFSFGVLLLEIVSG 267
E +++D++S GV+ ++SG
Sbjct: 186 EIVNYEPLGLEADMWSIGVITYILLSG 212
>pdb|1IG1|A Chain A, 1.8a X-Ray Structure Of Ternary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue And Mn.
pdb|1JKL|A Chain A, 1.6a X-Ray Structure Of Binary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue
pdb|1JKS|A Chain A, 1.5a X-Ray Structure Of Apo Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKT|A Chain A, Tetragonal Crystal Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKT|B Chain B, Tetragonal Crystal Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKK|A Chain A, 2.4a X-Ray Structure Of Ternary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue And Mg.
pdb|3F5G|A Chain A, Crystal Structure Of Death Associated Protein Kinase In
Complex With Adp And Mg2+
pdb|3EH9|A Chain A, Crystal Structure Of Death Associated Protein Kinase
Complexed With Adp
pdb|3EHA|A Chain A, Crystal Structure Of Death Associated Protein Kinase
Complexed With Amppnp
Length = 294
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 56/207 (27%), Positives = 95/207 (45%), Gaps = 36/207 (17%)
Query: 91 FSDANKLGEGGFGPVYKGVLKK-GDEIAVKRLP------GRSGQGLREMKNEASVIAKVQ 143
+ +LG G F V K K G + A K + R G +++ E S++ ++Q
Sbjct: 12 YDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQ 71
Query: 144 HKNLVRLLGCCIDKDEKILIYEYMPNKSLDFFLFDPTKRMLLDWSAN-----------YS 192
H N++ L +K + ILI E + L F F K L + A Y
Sbjct: 72 HPNVITLHEVYENKTDVILILELVAGGEL--FDFLAEKESLTEEEATEFLKQILNGVYYL 129
Query: 193 SRLKVSN--------ILLDKDI-NP--KISDFGMA-RICGGNELQANTSRIVGTYGYMSP 240
L++++ +LLD+++ P KI DFG+A +I GNE + I GT +++P
Sbjct: 130 HSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFK----NIFGTPEFVAP 185
Query: 241 EYAIQGIFSIKSDVFSFGVLLLEIVSG 267
E +++D++S GV+ ++SG
Sbjct: 186 EIVNYEPLGLEADMWSIGVITYILLSG 212
>pdb|3F5U|A Chain A, Crystal Structure Of The Death Associated Protein Kinase
In Complex With Amppnp And Mg2+
Length = 295
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 56/207 (27%), Positives = 95/207 (45%), Gaps = 36/207 (17%)
Query: 91 FSDANKLGEGGFGPVYKGVLKK-GDEIAVKRLP------GRSGQGLREMKNEASVIAKVQ 143
+ +LG G F V K K G + A K + R G +++ E S++ ++Q
Sbjct: 13 YDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQ 72
Query: 144 HKNLVRLLGCCIDKDEKILIYEYMPNKSLDFFLFDPTKRMLLDWSAN-----------YS 192
H N++ L +K + ILI E + L F F K L + A Y
Sbjct: 73 HPNVITLHEVYENKTDVILILELVAGGEL--FDFLAEKESLTEEEATEFLKQILNGVYYL 130
Query: 193 SRLKVSN--------ILLDKDI-NP--KISDFGMA-RICGGNELQANTSRIVGTYGYMSP 240
L++++ +LLD+++ P KI DFG+A +I GNE + I GT +++P
Sbjct: 131 HSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFK----NIFGTPEFVAP 186
Query: 241 EYAIQGIFSIKSDVFSFGVLLLEIVSG 267
E +++D++S GV+ ++SG
Sbjct: 187 EIVNYEPLGLEADMWSIGVITYILLSG 213
>pdb|2W4K|A Chain A, X-Ray Structure Of A Dap-Kinase 2-302
Length = 302
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 55/207 (26%), Positives = 94/207 (45%), Gaps = 36/207 (17%)
Query: 91 FSDANKLGEGGFGPVYKGVLKK-GDEIAVKRLP------GRSGQGLREMKNEASVIAKVQ 143
+ +LG G F V K K G + A K + R G +++ E S++ ++Q
Sbjct: 13 YDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQ 72
Query: 144 HKNLVRLLGCCIDKDEKILIYEYMPNKSLDFFLFDPTKRMLLDWSAN-----------YS 192
H N++ L +K + ILI E + L F F K L + A Y
Sbjct: 73 HPNVITLHEVYENKTDVILILELVAGGEL--FDFLAEKESLTEEEATEFLKQILNGVYYL 130
Query: 193 SRLKVSN--------ILLDKDI---NPKISDFGMA-RICGGNELQANTSRIVGTYGYMSP 240
L++++ +LLD+++ KI DFG+A +I GNE + I GT +++P
Sbjct: 131 HSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFK----NIFGTPEFVAP 186
Query: 241 EYAIQGIFSIKSDVFSFGVLLLEIVSG 267
E +++D++S GV+ ++SG
Sbjct: 187 EIVNYEPLGLEADMWSIGVITYILLSG 213
>pdb|3G51|A Chain A, Structural Diversity Of The Active Conformation Of The N-
Terminal Kinase Domain Of P90 Ribosomal S6 Kinase 2
Length = 325
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 27/73 (36%), Positives = 47/73 (64%), Gaps = 2/73 (2%)
Query: 195 LKVSNILLDKDINPKISDFGMARICGGNELQANTSRIVGTYGYMSPEYAIQGIFSIKSDV 254
LK NILLD++ + K++DFG+++ +E +A + GT YM+PE + + +D
Sbjct: 152 LKPENILLDEEGHIKLTDFGLSKESIDHEKKAYS--FCGTVEYMAPEVVNRRGHTQSADW 209
Query: 255 FSFGVLLLEIVSG 267
+SFGVL+ E+++G
Sbjct: 210 WSFGVLMFEMLTG 222
>pdb|3DFC|B Chain B, Crystal Structure Of A Glycine-Rich Loop Mutant Of The
Death Associated Protein Kinase Catalytic Domain With
Amppnp
pdb|3DGK|A Chain A, Crystal Structure Of A Glycine-Rich Loop Mutant Of The
Death Associated Protein Kinase Catalytic Domain
Length = 295
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 55/207 (26%), Positives = 94/207 (45%), Gaps = 36/207 (17%)
Query: 91 FSDANKLGEGGFGPVYKGVLKK-GDEIAVKRLP------GRSGQGLREMKNEASVIAKVQ 143
+ +LG G F V K K G + A K + R G +++ E S++ ++Q
Sbjct: 13 YDTGEELGSGKFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQ 72
Query: 144 HKNLVRLLGCCIDKDEKILIYEYMPNKSLDFFLFDPTKRMLLDWSAN-----------YS 192
H N++ L +K + ILI E + L F F K L + A Y
Sbjct: 73 HPNVITLHEVYENKTDVILILELVAGGEL--FDFLAEKESLTEEEATEFLKQILNGVYYL 130
Query: 193 SRLKVSN--------ILLDKDI---NPKISDFGMA-RICGGNELQANTSRIVGTYGYMSP 240
L++++ +LLD+++ KI DFG+A +I GNE + I GT +++P
Sbjct: 131 HSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFK----NIFGTPEFVAP 186
Query: 241 EYAIQGIFSIKSDVFSFGVLLLEIVSG 267
E +++D++S GV+ ++SG
Sbjct: 187 EIVNYEPLGLEADMWSIGVITYILLSG 213
>pdb|2B9F|A Chain A, Crystal Structure Of Non-Phosphorylated Fus3
Length = 353
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 48/215 (22%), Positives = 98/215 (45%), Gaps = 38/215 (17%)
Query: 84 VSTATNKFSDANKLGEGGFGPVYKGVLKK-GDEIAVKRL-----PGRSGQGLREMKNEAS 137
V ++ F + LGEG +G V K G+ +A+K++ P + + LRE+K
Sbjct: 6 VYNISSDFQLKSLLGEGAYGVVCSATHKPTGEIVAIKKIEPFDKPLFALRTLREIK---- 61
Query: 138 VIAKVQHKNLVRLLGC-----------------CIDKD-EKILIYEYMPNKSLDFFLFDP 179
++ +H+N++ + + D +++ + + + + +F++
Sbjct: 62 ILKHFKHENIITIFNIQRPDSFENFNEVYIIQELMQTDLHRVISTQMLSDDHIQYFIYQT 121
Query: 180 TKRMLLDWSANYSSR-LKVSNILLDKDINPKISDFGMARICGGNEL--------QANTSR 230
+ + + +N R LK SN+L++ + + K+ DFG+ARI + Q+ +
Sbjct: 122 LRAVKVLHGSNVIHRDLKPSNLLINSNCDLKVCDFGLARIIDESAADNSEPTGQQSGMTE 181
Query: 231 IVGTYGYMSPEYAIQGI-FSIKSDVFSFGVLLLEI 264
V T Y +PE + +S DV+S G +L E+
Sbjct: 182 YVATRWYRAPEVMLTSAKYSRAMDVWSCGCILAEL 216
>pdb|2GNF|A Chain A, Protein Kinase A Fivefold Mutant Model Of Rho-Kinase With
Y- 27632
Length = 350
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 50/199 (25%), Positives = 90/199 (45%), Gaps = 25/199 (12%)
Query: 89 NKFSDANKLGEGGFGPVY-KGVLKKGDEIAVKRLPGRSGQGLREMK---NEASVIAKVQH 144
++F +G G FG V ++ G+ A+K L + L++++ NE ++ V
Sbjct: 41 DQFERIKTIGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 100
Query: 145 KNLVRLLGCCIDKDEKILIYEYMPNKSLDFFL------FDPTKR-----MLLDWSANYS- 192
LV+L D ++ EYMP + L +P R ++L + +S
Sbjct: 101 PFLVKLEFSFKDNSNLYMVMEYMPGGDMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSL 160
Query: 193 ----SRLKVSNILLDKDINPKISDFGMARICGGNELQANTSRIVGTYGYMSPEYAIQGIF 248
LK N+L+D+ K++DFG A+ G T + GT Y++PE + +
Sbjct: 161 DLIYRDLKPENLLIDQQGYIKVADFGFAKRVKGR-----TWXLCGTPEYLAPEIILSKGY 215
Query: 249 SIKSDVFSFGVLLLEIVSG 267
+ D ++ GVL+ E+ +G
Sbjct: 216 NKAVDWWALGVLIYEMAAG 234
>pdb|2F9G|A Chain A, Crystal Structure Of Fus3 Phosphorylated On Tyr182
Length = 353
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 48/215 (22%), Positives = 98/215 (45%), Gaps = 38/215 (17%)
Query: 84 VSTATNKFSDANKLGEGGFGPVYKGVLKK-GDEIAVKRL-----PGRSGQGLREMKNEAS 137
V ++ F + LGEG +G V K G+ +A+K++ P + + LRE+K
Sbjct: 6 VYNISSDFQLKSLLGEGAYGVVCSATHKPTGEIVAIKKIEPFDKPLFALRTLREIK---- 61
Query: 138 VIAKVQHKNLVRLLGC-----------------CIDKD-EKILIYEYMPNKSLDFFLFDP 179
++ +H+N++ + + D +++ + + + + +F++
Sbjct: 62 ILKHFKHENIITIFNIQRPDSFENFNEVYIIQELMQTDLHRVISTQMLSDDHIQYFIYQT 121
Query: 180 TKRMLLDWSANYSSR-LKVSNILLDKDINPKISDFGMARICGGNEL--------QANTSR 230
+ + + +N R LK SN+L++ + + K+ DFG+ARI + Q+ +
Sbjct: 122 LRAVKVLHGSNVIHRDLKPSNLLINSNCDLKVCDFGLARIIDESAADNSEPTGQQSGMTE 181
Query: 231 IVGTYGYMSPEYAIQGI-FSIKSDVFSFGVLLLEI 264
V T Y +PE + +S DV+S G +L E+
Sbjct: 182 XVATRWYRAPEVMLTSAKYSRAMDVWSCGCILAEL 216
>pdb|2XZS|A Chain A, Death Associated Protein Kinase 1 Residues 1-312
pdb|2XZS|B Chain B, Death Associated Protein Kinase 1 Residues 1-312
Length = 312
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 55/207 (26%), Positives = 94/207 (45%), Gaps = 36/207 (17%)
Query: 91 FSDANKLGEGGFGPVYKGVLKK-GDEIAVKRLP------GRSGQGLREMKNEASVIAKVQ 143
+ +LG G F V K K G + A K + R G +++ E S++ ++Q
Sbjct: 13 YDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQ 72
Query: 144 HKNLVRLLGCCIDKDEKILIYEYMPNKSLDFFLFDPTKRMLLDWSAN-----------YS 192
H N++ L +K + ILI E + L F F K L + A Y
Sbjct: 73 HPNVITLHEVYENKTDVILILELVAGGEL--FDFLAEKESLTEEEATEFLKQILNGVYYL 130
Query: 193 SRLKVSN--------ILLDKDI---NPKISDFGMA-RICGGNELQANTSRIVGTYGYMSP 240
L++++ +LLD+++ KI DFG+A +I GNE + I GT +++P
Sbjct: 131 HSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFK----NIFGTPEFVAP 186
Query: 241 EYAIQGIFSIKSDVFSFGVLLLEIVSG 267
E +++D++S GV+ ++SG
Sbjct: 187 EIVNYEPLGLEADMWSIGVITYILLSG 213
>pdb|3FI3|A Chain A, Crystal Structure Of Jnk3 With Indazole Inhibitor, Sr-3737
Length = 364
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 52/210 (24%), Positives = 91/210 (43%), Gaps = 29/210 (13%)
Query: 83 SVSTATNKFSDANKLGEGGFGPV---YKGVLKKGDEIAVKRL--PGRSGQGLREMKNEAS 137
S T ++ + +G G G V Y VL + +A+K+L P ++ + E
Sbjct: 18 STFTVLKRYQNLKPIGSGAQGIVCAAYDAVLDRN--VAIKKLSRPFQNQTHAKRAYRELV 75
Query: 138 VIAKVQHKNLVRLLGC------------------CIDKDEKILIYEYMPNKSLDFFLFDP 179
++ V HKN++ LL +D + +I + ++ + + L+
Sbjct: 76 LMKXVNHKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLXQVIQMELDHERMSYLLYQM 135
Query: 180 TKRMLLDWSANYSSR-LKVSNILLDKDINPKISDFGMARICGGNELQANTSRIVGTYGYM 238
+ SA R LK SNI++ D KI DFG+AR G + + T +V Y Y
Sbjct: 136 LXGIKHLHSAGIIHRDLKPSNIVVKSDXTLKILDFGLARTAGTSFMM--TPYVVTRY-YR 192
Query: 239 SPEYAIQGIFSIKSDVFSFGVLLLEIVSGK 268
+PE + + D++S G ++ E+V K
Sbjct: 193 APEVILGMGYKENVDIWSVGCIMGEMVRHK 222
>pdb|3OHT|A Chain A, Crystal Structure Of Salmo Salar P38alpha
pdb|3OHT|B Chain B, Crystal Structure Of Salmo Salar P38alpha
Length = 389
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 50/224 (22%), Positives = 103/224 (45%), Gaps = 31/224 (13%)
Query: 83 SVSTATNKFSDANKLGEGGFGPVYKGV-LKKGDEIAVKRL--PGRSGQGLREMKNEASVI 139
++ ++ + +G G +G V +K G +IAVK+L P +S + E ++
Sbjct: 45 TIWEVPERYQTLSPVGSGAYGSVCSSYDVKSGLKIAVKKLSRPFQSIIHAKRTYRELRLL 104
Query: 140 AKVQHKNLVRLL-----GCCIDKDEKILIYEYMPNKSLD--------------FFLFDPT 180
++H+N++ LL +++ + + ++ L+ F ++
Sbjct: 105 KHMKHENVIGLLDVFTPATSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQIL 164
Query: 181 KRMLLDWSANYSSR-LKVSNILLDKDINPKISDFGMARICGGNELQANTSRIVGTYGYMS 239
+ + SA+ R LK SN+ +++D KI DFG+AR + V T Y +
Sbjct: 165 RGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLAR-----HTDDEMTGYVATRWYRA 219
Query: 240 PEYAIQGI-FSIKSDVFSFGVLLLEIVSGKKTTGFYRTDSLTLL 282
PE + + +++ D++S G ++ E+++G+ T F TD + L
Sbjct: 220 PEIMLNWMHYNMTVDIWSVGCIMAELLTGR--TLFPGTDHINQL 261
>pdb|2YAK|A Chain A, Structure Of Death-Associated Protein Kinase 1 (Dapk1) In
Complex With A Ruthenium Octasporine Ligand (Osv)
pdb|2Y4P|A Chain A, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|B Chain B, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|C Chain C, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|D Chain D, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|3ZXT|A Chain A, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|B Chain B, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|C Chain C, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|D Chain D, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
Length = 285
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 55/207 (26%), Positives = 94/207 (45%), Gaps = 36/207 (17%)
Query: 91 FSDANKLGEGGFGPVYKGVLKK-GDEIAVKRLP------GRSGQGLREMKNEASVIAKVQ 143
+ +LG G F V K K G + A K + R G +++ E S++ ++Q
Sbjct: 13 YDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQ 72
Query: 144 HKNLVRLLGCCIDKDEKILIYEYMPNKSLDFFLFDPTKRMLLDWSAN-----------YS 192
H N++ L +K + ILI E + L F F K L + A Y
Sbjct: 73 HPNVITLHEVYENKTDVILILELVAGGEL--FDFLAEKESLTEEEATEFLKQILNGVYYL 130
Query: 193 SRLKVSN--------ILLDKDI---NPKISDFGMA-RICGGNELQANTSRIVGTYGYMSP 240
L++++ +LLD+++ KI DFG+A +I GNE + I GT +++P
Sbjct: 131 HSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFK----NIFGTPEFVAP 186
Query: 241 EYAIQGIFSIKSDVFSFGVLLLEIVSG 267
E +++D++S GV+ ++SG
Sbjct: 187 EIVNYEPLGLEADMWSIGVITYILLSG 213
>pdb|2X7F|A Chain A, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|B Chain B, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|C Chain C, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|D Chain D, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|E Chain E, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
Length = 326
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 53/230 (23%), Positives = 96/230 (41%), Gaps = 35/230 (15%)
Query: 68 SKKKEVDQLPLFSFSSVSTATNKFSDANKLGEGGFGPVYKGVLKKGDEIAVKRLPGRSGQ 127
S + +D++ L S++ F +G G +G VYKG K ++A ++ +G
Sbjct: 6 SPARSLDEIDL---SALRDPAGIFELVELVGNGTYGQVYKGRHVKTGQLAAIKVMDVTGD 62
Query: 128 GLREMKNEASVIAKV-QHKNLVRLLGCCIDK------DEKILIYEYMPNKSLDFFLFDPT 180
E+K E +++ K H+N+ G I K D+ L+ E+ S+ + +
Sbjct: 63 EEEEIKQEINMLKKYSHHRNIATYYGAFIKKNPPGMDDQLWLVMEFCGAGSVTDLIKNTK 122
Query: 181 KRMLLDWSANYSSR------------------LKVSNILLDKDINPKISDFGMARICGGN 222
L + Y R +K N+LL ++ K+ DFG++
Sbjct: 123 GNTLKEEWIAYICREILRGLSHLHQHKVIHRDIKGQNVLLTENAEVKLVDFGVSAQLDRT 182
Query: 223 ELQANTSRIVGTYGYMSPEYAI-----QGIFSIKSDVFSFGVLLLEIVSG 267
+ NT +GT +M+PE + KSD++S G+ +E+ G
Sbjct: 183 VGRRNT--FIGTPYWMAPEVIACDENPDATYDFKSDLWSLGITAIEMAEG 230
>pdb|2GNG|A Chain A, Protein Kinase A Fivefold Mutant Model Of Rho-Kinase
pdb|2GNH|A Chain A, Pka Five Fold Mutant Model Of Rho-Kinase With H1152p
pdb|2GNI|A Chain A, Pka Fivefold Mutant Model Of Rho-Kinase With Inhibitor
Fasudil (Ha1077)
Length = 350
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 50/199 (25%), Positives = 90/199 (45%), Gaps = 25/199 (12%)
Query: 89 NKFSDANKLGEGGFGPVY-KGVLKKGDEIAVKRLPGRSGQGLREMK---NEASVIAKVQH 144
++F +G G FG V ++ G+ A+K L + L++++ NE ++ V
Sbjct: 41 DQFERIKTIGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 100
Query: 145 KNLVRLLGCCIDKDEKILIYEYMPNKSLDFFL------FDPTKR-----MLLDWSANYS- 192
LV+L D ++ EYMP + L +P R ++L + +S
Sbjct: 101 PFLVKLEFSFKDNSNLYMVMEYMPGGDMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSL 160
Query: 193 ----SRLKVSNILLDKDINPKISDFGMARICGGNELQANTSRIVGTYGYMSPEYAIQGIF 248
LK N+L+D+ K++DFG A+ G T + GT Y++PE + +
Sbjct: 161 DLIYRDLKPENLLIDQQGYIKVADFGFAKRVKGR-----TWXLCGTPEYLAPEIILSKGY 215
Query: 249 SIKSDVFSFGVLLLEIVSG 267
+ D ++ GVL+ E+ +G
Sbjct: 216 NKAVDWWALGVLIYEMAAG 234
>pdb|3EQC|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Ternary Complex With
Compound 1, Atp-Gs And Mg2p
pdb|3EQD|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With Atp-Gs
And Mg2p
pdb|3EQF|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With K252a
And Mg2p
pdb|3EQG|A Chain A, X-ray Structure Of The Human Mitogen-activated Protein
Kinase Kinase 1 (mek1) In A Ternary Complex With Pd, Adp
And Mg2p
pdb|3EQH|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Ternary Complex With U0126,
Adp And Mg2p
pdb|3EQI|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With Adp And
Mg2p
Length = 360
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 58/240 (24%), Positives = 101/240 (42%), Gaps = 46/240 (19%)
Query: 57 ELPVNSKQTKR-----SKKKEVDQLPLFSFSSVSTATNKFSDANKLGEGGFGPVYKGVLK 111
EL ++ +Q KR ++K++V +L + F ++LG G G V+K K
Sbjct: 6 ELELDEQQRKRLEAFLTQKQKVGEL----------KDDDFEKISELGAGNGGVVFKVSHK 55
Query: 112 KGDEIAVKRL------PGRSGQGLREMKNEASVIAKVQHKNLVRLLGCCIDKDEKILIYE 165
+ ++L P Q +RE++ V+ + +V G E + E
Sbjct: 56 PSGLVMARKLIHLEIKPAIRNQIIRELQ----VLHECNSPYIVGFYGAFYSDGEISICME 111
Query: 166 YMPNKSLDFFLFDPTK-----------------RMLLDWSANYSSRLKVSNILLDKDINP 208
+M SLD L + L + +K SNIL++
Sbjct: 112 HMDGGSLDQVLKKAGRIPEQILGKVSIAVIKGLTYLREKHKIMHRDVKPSNILVNSRGEI 171
Query: 209 KISDFGMARICGGNELQANTSRIVGTYGYMSPEYAIQGIFSIKSDVFSFGVLLLEIVSGK 268
K+ DFG++ G + + + VGT YMSPE +S++SD++S G+ L+E+ G+
Sbjct: 172 KLCDFGVS----GQLIDSMANSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGR 227
>pdb|2W4J|A Chain A, X-Ray Structure Of A Dap-Kinase 2-277
Length = 277
Score = 49.7 bits (117), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 55/207 (26%), Positives = 94/207 (45%), Gaps = 36/207 (17%)
Query: 91 FSDANKLGEGGFGPVYKGVLKK-GDEIAVKRLP------GRSGQGLREMKNEASVIAKVQ 143
+ +LG G F V K K G + A K + R G +++ E S++ ++Q
Sbjct: 13 YDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQ 72
Query: 144 HKNLVRLLGCCIDKDEKILIYEYMPNKSLDFFLFDPTKRMLLDWSAN-----------YS 192
H N++ L +K + ILI E + L F F K L + A Y
Sbjct: 73 HPNVITLHEVYENKTDVILILELVAGGEL--FDFLAEKESLTEEEATEFLKQILNGVYYL 130
Query: 193 SRLKVSN--------ILLDKDI---NPKISDFGMA-RICGGNELQANTSRIVGTYGYMSP 240
L++++ +LLD+++ KI DFG+A +I GNE + I GT +++P
Sbjct: 131 HSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFK----NIFGTPEFVAP 186
Query: 241 EYAIQGIFSIKSDVFSFGVLLLEIVSG 267
E +++D++S GV+ ++SG
Sbjct: 187 EIVNYEPLGLEADMWSIGVITYILLSG 213
>pdb|4EXU|A Chain A, Mapk13, Inactive Form
pdb|4EYJ|A Chain A, Mapk13 Complex With Inhibitor
pdb|4EYM|A Chain A, Mapk13 Complex With Inhibitor
Length = 371
Score = 49.7 bits (117), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 48/202 (23%), Positives = 92/202 (45%), Gaps = 30/202 (14%)
Query: 91 FSDANKLGEGGFGPVYKGVLKK-GDEIAVKRL--PGRSGQGLREMKNEASVIAKVQHKNL 147
+ +G G +G V + K+ G+++A+K+L P +S + E ++ +QH+N+
Sbjct: 44 YVSPTHVGSGAYGSVCSAIDKRSGEKVAIKKLSRPFQSEIFAKRAYRELLLLKHMQHENV 103
Query: 148 VRLLGCCIDKD-------------------EKILIYEYMPNKSLDFFLFDPTKRMLLDWS 188
+ LL +KI+ E+ K + + ++ K + S
Sbjct: 104 IGLLDVFTPASSLRNFYDFYLVMPFMQTDLQKIMGMEFSEEK-IQYLVYQMLKGLKYIHS 162
Query: 189 ANYSSR-LKVSNILLDKDINPKISDFGMARICGGNELQANTSRIVGTYGYMSPEYAIQGI 247
A R LK N+ +++D KI DFG+AR A + V T Y +PE + +
Sbjct: 163 AGVVHRDLKPGNLAVNEDCELKILDFGLAR-----HADAEMTGYVVTRWYRAPEVILSWM 217
Query: 248 -FSIKSDVFSFGVLLLEIVSGK 268
++ D++S G ++ E+++GK
Sbjct: 218 HYNQTVDIWSVGCIMAEMLTGK 239
>pdb|1XH9|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 49.7 bits (117), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 50/199 (25%), Positives = 90/199 (45%), Gaps = 25/199 (12%)
Query: 89 NKFSDANKLGEGGFGPVY-KGVLKKGDEIAVKRLPGRSGQGLREMK---NEASVIAKVQH 144
++F LG G FG V ++ G+ A+K L + L+E++ NE ++ V
Sbjct: 41 DQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKEIEHTLNEKRILQAVNF 100
Query: 145 KNLVRLLGCCIDKDEKILIYEYMPNKSLDFFL------FDPTKR-----MLLDWSANYS- 192
LV+L D ++ EY P + L +P R ++L + +S
Sbjct: 101 PFLVKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSL 160
Query: 193 ----SRLKVSNILLDKDINPKISDFGMARICGGNELQANTSRIVGTYGYMSPEYAIQGIF 248
LK N+++D+ K++DFG+A+ G T + GT Y++PE + +
Sbjct: 161 DLIYRDLKPENLMIDQQGYIKVTDFGLAKRVKGR-----TWXLCGTPEYLAPEIILSKGY 215
Query: 249 SIKSDVFSFGVLLLEIVSG 267
+ D ++ GVL+ E+ +G
Sbjct: 216 NKAVDWWALGVLIYEMAAG 234
>pdb|3COI|A Chain A, Crystal Structure Of P38delta Kinase
Length = 353
Score = 49.7 bits (117), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 47/201 (23%), Positives = 91/201 (45%), Gaps = 28/201 (13%)
Query: 91 FSDANKLGEGGFGPVYKGVLKK-GDEIAVKRL--PGRSGQGLREMKNEASVIAKVQHKNL 147
+ +G G +G V + K+ G+++A+K+L P +S + E ++ +QH+N+
Sbjct: 26 YVSPTHVGSGAYGSVCSAIDKRSGEKVAIKKLSRPFQSEIFAKRAYRELLLLKHMQHENV 85
Query: 148 VRLLGCCIDKDEKILIYEY---MP---------------NKSLDFFLFDPTKRMLLDWSA 189
+ LL Y++ MP + + + ++ K + SA
Sbjct: 86 IGLLDVFTPASSLRNFYDFYLVMPFMQTDLQKIMGLKFSEEKIQYLVYQMLKGLKYIHSA 145
Query: 190 NYSSR-LKVSNILLDKDINPKISDFGMARICGGNELQANTSRIVGTYGYMSPEYAIQGI- 247
R LK N+ +++D KI DFG+AR A + V T Y +PE + +
Sbjct: 146 GVVHRDLKPGNLAVNEDCELKILDFGLAR-----HADAEMTGYVVTRWYRAPEVILSWMH 200
Query: 248 FSIKSDVFSFGVLLLEIVSGK 268
++ D++S G ++ E+++GK
Sbjct: 201 YNQTVDIWSVGCIMAEMLTGK 221
>pdb|1WVW|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
pdb|1WVX|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
pdb|1WVY|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
Length = 278
Score = 49.7 bits (117), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 55/207 (26%), Positives = 94/207 (45%), Gaps = 36/207 (17%)
Query: 91 FSDANKLGEGGFGPVYKGVLKK-GDEIAVKRLP------GRSGQGLREMKNEASVIAKVQ 143
+ +LG G F V K K G + A K + R G +++ E S++ ++Q
Sbjct: 13 YDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQ 72
Query: 144 HKNLVRLLGCCIDKDEKILIYEYMPNKSLDFFLFDPTKRMLLDWSAN-----------YS 192
H N++ L +K + ILI E + L F F K L + A Y
Sbjct: 73 HPNVITLHEVYENKTDVILILELVAGGEL--FDFLAEKESLTEEEATEFLKQILNGVYYL 130
Query: 193 SRLKVSN--------ILLDKDI---NPKISDFGMA-RICGGNELQANTSRIVGTYGYMSP 240
L++++ +LLD+++ KI DFG+A +I GNE + I GT +++P
Sbjct: 131 HSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFK----NIFGTPEFVAP 186
Query: 241 EYAIQGIFSIKSDVFSFGVLLLEIVSG 267
E +++D++S GV+ ++SG
Sbjct: 187 EIVNYEPLGLEADMWSIGVITYILLSG 213
>pdb|3D14|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly,
Lys240->arg, Met302- >leu) In Complex With
1-{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)- Ethyl]-
Thiazol-2-Yl}-3-(3-Trifluoromethyl-Phenyl)-Urea
pdb|3DJ5|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 290.
pdb|3DJ6|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 823.
pdb|3DJ7|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 130.
pdb|3D15|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With
1-(3-Chloro-Phenyl)-3-
{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)-
Ethyl]-Thiazol-2- Yl}-Urea [sns-314]
pdb|3D2I|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With 1-{5-[2-(1-Methyl-1h-
Pyrazolo[4,
3-D]pyrimidin-7-Ylamino)-Ethyl]-Thiazol-2-Yl}-3-
(3-Trifluoromethyl-Phenyl)-Urea
pdb|3D2K|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With
[7-(2-{2-[3-(3-Chloro-
Phenyl)-Ureido]-Thiazol-5-Yl}-Ethylamino)-Pyrazolo[4,3-
D]pyrimidin-1-Yl]-Acetic Acid
Length = 272
Score = 49.7 bits (117), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 51/201 (25%), Positives = 85/201 (42%), Gaps = 32/201 (15%)
Query: 91 FSDANKLGEGGFGPVYKGVLKKGDEIAVKRLPGRSG---QGL-REMKNEASVIAKVQHKN 146
F LG+G FG VY ++ I ++ ++ G+ +++ E + + ++H N
Sbjct: 14 FDIGRPLGKGKFGNVYLARERQSKFILALKVLFKTQLEKAGVEHQLRREVEIQSHLRHPN 73
Query: 147 LVRLLGCCIDKDEKILIYEYMPNKSLDFFLFDPTKRMLLDWSANYSSRL----------- 195
++RL G D LI EY P ++ + R +A Y + L
Sbjct: 74 ILRLYGYFHDATRVYLILEYAPLGTV-YRELQKLSRFDEQRTATYITELANALSYCHSKR 132
Query: 196 ------KVSNILLDKDINPKISDFGMARICGGNELQANTSR---IVGTYGYMSPEYAIQG 246
K N+LL + KI+DFG + + A +SR + GT Y+ PE
Sbjct: 133 VIHRDIKPENLLLGSNGELKIADFGWS-------VHAPSSRRTTLCGTLDYLPPEMIEGR 185
Query: 247 IFSIKSDVFSFGVLLLEIVSG 267
+ K D++S GVL E + G
Sbjct: 186 MHDEKVDLWSLGVLCYEFLVG 206
>pdb|3UBD|A Chain A, Structure Of N-Terminal Domain Of Rsk2 Kinase In Complex
With Flavonoid Glycoside Sl0101
Length = 304
Score = 49.7 bits (117), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 27/73 (36%), Positives = 47/73 (64%), Gaps = 2/73 (2%)
Query: 195 LKVSNILLDKDINPKISDFGMARICGGNELQANTSRIVGTYGYMSPEYAIQGIFSIKSDV 254
LK NILLD++ + K++DFG+++ +E +A + GT YM+PE + + +D
Sbjct: 152 LKPENILLDEEGHIKLTDFGLSKESIDHEKKAYS--FCGTVEYMAPEVVNRRGHTQSADW 209
Query: 255 FSFGVLLLEIVSG 267
+SFGVL+ E+++G
Sbjct: 210 WSFGVLMFEMLTG 222
>pdb|4EL9|A Chain A, Structure Of N-Terminal Kinase Domain Of Rsk2 With Afzelin
pdb|4GUE|A Chain A, Structure Of N-terminal Kinase Domain Of Rsk2 With
Flavonoid Glycoside Quercitrin
Length = 305
Score = 49.7 bits (117), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 27/73 (36%), Positives = 47/73 (64%), Gaps = 2/73 (2%)
Query: 195 LKVSNILLDKDINPKISDFGMARICGGNELQANTSRIVGTYGYMSPEYAIQGIFSIKSDV 254
LK NILLD++ + K++DFG+++ +E +A + GT YM+PE + + +D
Sbjct: 153 LKPENILLDEEGHIKLTDFGLSKESIDHEKKAYS--FCGTVEYMAPEVVNRRGHTQSADW 210
Query: 255 FSFGVLLLEIVSG 267
+SFGVL+ E+++G
Sbjct: 211 WSFGVLMFEMLTG 223
>pdb|3DAJ|A Chain A, Crystal Structure Of Aurora A Complexed With An Inhibitor
Discovered Through Site-Directed Dynamic Tethering
Length = 272
Score = 49.7 bits (117), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 51/201 (25%), Positives = 85/201 (42%), Gaps = 32/201 (15%)
Query: 91 FSDANKLGEGGFGPVYKGVLKKGDEIAVKRLPGRSG---QGL-REMKNEASVIAKVQHKN 146
F LG+G FG VY ++ I ++ ++ G+ +++ E + + ++H N
Sbjct: 14 FDIGRPLGKGKFGNVYLARERQSKFILALKVLFKTQLEKAGVEHQLRREVEIQSHLRHPN 73
Query: 147 LVRLLGCCIDKDEKILIYEYMPNKSLDFFLFDPTKRMLLDWSANYSSRL----------- 195
++RL G D LI EY P ++ + R +A Y + L
Sbjct: 74 ILRLYGYFHDATRVYLILEYAPLGTV-YRELQKLSRFDEQRTATYITELANALSYCHSKR 132
Query: 196 ------KVSNILLDKDINPKISDFGMARICGGNELQANTSR---IVGTYGYMSPEYAIQG 246
K N+LL + KI+DFG + + A +SR + GT Y+ PE
Sbjct: 133 VIHRDIKPENLLLGSNGELKIADFGWS-------VHAPSSRRDTLCGTLDYLPPEMIEGR 185
Query: 247 IFSIKSDVFSFGVLLLEIVSG 267
+ K D++S GVL E + G
Sbjct: 186 MHDEKVDLWSLGVLCYEFLVG 206
>pdb|3HNG|A Chain A, Crystal Structure Of Vegfr1 In Complex With
N-(4-chlorophenyl)-2-
((pyridin-4-ylmethyl)amino)benzamide
Length = 360
Score = 49.7 bits (117), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 46/150 (30%), Positives = 62/150 (41%), Gaps = 18/150 (12%)
Query: 195 LKVSNILLDKDINPKISDFGMARICGGNELQANTSRIVGTYGYMSPEYAIQGIFSIKSDV 254
L NILL ++ KI DFG+AR N +M+PE I+S KSDV
Sbjct: 225 LAARNILLSENNVVKICDFGLARDIYKNPDYVRKGDTRLPLKWMAPESIFDKIYSTKSDV 284
Query: 255 FSFGVLLLEIVS--GKKTTGFYRTDSLTLLGYAWDLWTSNRTLELIDPILEDEYSSKHML 312
+S+GVLL EI S G G + +R E + + EYS+ +
Sbjct: 285 WSYGVLLWEIFSLGGSPYPGVQMDEDFC-----------SRLREGMR-MRAPEYSTPEI- 331
Query: 313 LRYVNIALLCVQESADDRPTMNEVVSMLTD 342
I L C +RP E+V L D
Sbjct: 332 ---YQIMLDCWHRDPKERPRFAELVEKLGD 358
Score = 30.4 bits (67), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 30/115 (26%), Positives = 51/115 (44%), Gaps = 10/115 (8%)
Query: 71 KEVDQLPLFSFSSVSTATNKFSDANKLGEGGFGPVYKGV---LKKGDE---IAVKRL-PG 123
++ ++LP + S A + LG G FG V + +KK +AVK L G
Sbjct: 10 EQCERLP-YDASKWEFARERLKLGKSLGRGAFGKVVQASAFGIKKSPTCRTVAVKMLKEG 68
Query: 124 RSGQGLREMKNEASVIAKV-QHKNLVRLLGCCIDKDEKIL-IYEYMPNKSLDFFL 176
+ + + E ++ + H N+V LLG C + ++ I EY +L +L
Sbjct: 69 ATASEYKALMTELKILTHIGHHLNVVNLLGACTKQGGPLMVIVEYCKYGNLSNYL 123
>pdb|3GU4|A Chain A, Crystal Structure Of Dapkq23v-Amppnp
pdb|3GU5|A Chain A, Crystal Structure Of Dapkq23v-Amppnp-Mg2+
pdb|3GU6|A Chain A, Crystal Structure Of Dapkq23v-Adp
pdb|3GU7|A Chain A, Crystal Structure Of Dapkq23v-Adp-Mg2+
Length = 295
Score = 49.7 bits (117), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 55/207 (26%), Positives = 94/207 (45%), Gaps = 36/207 (17%)
Query: 91 FSDANKLGEGGFGPVYKGVLKK-GDEIAVKRLP------GRSGQGLREMKNEASVIAKVQ 143
+ +LG G F V K K G + A K + R G +++ E S++ ++Q
Sbjct: 13 YDTGEELGSGVFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQ 72
Query: 144 HKNLVRLLGCCIDKDEKILIYEYMPNKSLDFFLFDPTKRMLLDWSAN-----------YS 192
H N++ L +K + ILI E + L F F K L + A Y
Sbjct: 73 HPNVITLHEVYENKTDVILILELVAGGEL--FDFLAEKESLTEEEATEFLKQILNGVYYL 130
Query: 193 SRLKVSN--------ILLDKDI---NPKISDFGMA-RICGGNELQANTSRIVGTYGYMSP 240
L++++ +LLD+++ KI DFG+A +I GNE + I GT +++P
Sbjct: 131 HSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFK----NIFGTPEFVAP 186
Query: 241 EYAIQGIFSIKSDVFSFGVLLLEIVSG 267
E +++D++S GV+ ++SG
Sbjct: 187 EIVNYEPLGLEADMWSIGVITYILLSG 213
>pdb|2YAC|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With
Nms-P937
pdb|4A4L|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
5-(2-Amino-Pyrimidin-4-Yl)-1h-Pyrrole Inhibitor
pdb|4A4O|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
2-
(2-Amino-Pyrimidin-4-Yl)-1,5,6,
7-Tetrahydro-Pyrrolopyridin- 4-One Inhibitor
Length = 311
Score = 49.7 bits (117), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 64/270 (23%), Positives = 110/270 (40%), Gaps = 48/270 (17%)
Query: 97 LGEGGFGPVYKGVLKKGDEIAVKRLPGRS----GQGLREMKNEASVIAKVQHKNLVRLLG 152
LG+GGF ++ E+ ++ +S +M E S+ + H+++V G
Sbjct: 25 LGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHG 84
Query: 153 CCIDKDEKILIYEYMPNKSLDFFLFDPTKRMLLDWSANYSSR------------------ 194
D D ++ E +SL ++ L + A Y R
Sbjct: 85 FFEDNDFVFVVLELCRRRSL--LELHKRRKALTEPEARYYLRQIVLGCQYLHRNRVIHRD 142
Query: 195 LKVSNILLDKDINPKISDFGMARICGGNELQANTSRIVGTYGYMSPEYAIQGIFSIKSDV 254
LK+ N+ L++D+ KI DFG+A + + T + GT Y++PE + S + DV
Sbjct: 143 LKLGNLFLNEDLEVKIGDFGLATKVEYDGERKKT--LCGTPNYIAPEVLSKKGHSFEVDV 200
Query: 255 FSFGVLLLEIVSGKKTTGFYRTDSLTLLGYAWDLWTSNRTLELIDPILEDEYS-SKHMLL 313
+S G ++ ++ GK + T L E I ++EYS KH+
Sbjct: 201 WSIGCIMYTLLVGKPP---FETSCLK---------------ETYLRIKKNEYSIPKHINP 242
Query: 314 RYVNIALLCVQESADDRPTMNEVVSMLTDE 343
++ +Q RPT+NE +L DE
Sbjct: 243 VAASLIQKMLQTDPTARPTINE---LLNDE 269
>pdb|2V5Q|A Chain A, Crystal Structure Of Wild-type Plk-1 Kinase Domain In
Complex With A Selective Darpin
pdb|2V5Q|B Chain B, Crystal Structure Of Wild-type Plk-1 Kinase Domain In
Complex With A Selective Darpin
Length = 315
Score = 49.3 bits (116), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 64/270 (23%), Positives = 110/270 (40%), Gaps = 48/270 (17%)
Query: 97 LGEGGFGPVYKGVLKKGDEIAVKRLPGRS----GQGLREMKNEASVIAKVQHKNLVRLLG 152
LG+GGF ++ E+ ++ +S +M E S+ + H+++V G
Sbjct: 29 LGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHG 88
Query: 153 CCIDKDEKILIYEYMPNKSLDFFLFDPTKRMLLDWSANYSSR------------------ 194
D D ++ E +SL ++ L + A Y R
Sbjct: 89 FFEDNDFVFVVLELCRRRSL--LELHKRRKALTEPEARYYLRQIVLGCQYLHRNRVIHRD 146
Query: 195 LKVSNILLDKDINPKISDFGMARICGGNELQANTSRIVGTYGYMSPEYAIQGIFSIKSDV 254
LK+ N+ L++D+ KI DFG+A + + T + GT Y++PE + S + DV
Sbjct: 147 LKLGNLFLNEDLEVKIGDFGLATKVEYDGERKKT--LCGTPNYIAPEVLSKKGHSFEVDV 204
Query: 255 FSFGVLLLEIVSGKKTTGFYRTDSLTLLGYAWDLWTSNRTLELIDPILEDEYS-SKHMLL 313
+S G ++ ++ GK + T L E I ++EYS KH+
Sbjct: 205 WSIGCIMYTLLVGKPP---FETSCLK---------------ETYLRIKKNEYSIPKHINP 246
Query: 314 RYVNIALLCVQESADDRPTMNEVVSMLTDE 343
++ +Q RPT+NE +L DE
Sbjct: 247 VAASLIQKMLQTDPTARPTINE---LLNDE 273
>pdb|2Y0A|A Chain A, Structure Of Dapk1 Construct Residues 1-304
Length = 326
Score = 49.3 bits (116), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 55/207 (26%), Positives = 94/207 (45%), Gaps = 36/207 (17%)
Query: 91 FSDANKLGEGGFGPVYKGVLKK-GDEIAVKRL------PGRSGQGLREMKNEASVIAKVQ 143
+ +LG G F V K K G + A K + R G +++ E S++ ++Q
Sbjct: 13 YDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQ 72
Query: 144 HKNLVRLLGCCIDKDEKILIYEYMPNKSLDFFLFDPTKRMLLDWSAN-----------YS 192
H N++ L +K + ILI E + L F F K L + A Y
Sbjct: 73 HPNVITLHEVYENKTDVILILELVAGGEL--FDFLAEKESLTEEEATEFLKQILNGVYYL 130
Query: 193 SRLKVSN--------ILLDKDI---NPKISDFGMA-RICGGNELQANTSRIVGTYGYMSP 240
L++++ +LLD+++ KI DFG+A +I GNE + I GT +++P
Sbjct: 131 HSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFK----NIFGTPEFVAP 186
Query: 241 EYAIQGIFSIKSDVFSFGVLLLEIVSG 267
E +++D++S GV+ ++SG
Sbjct: 187 EIVNYEPLGLEADMWSIGVITYILLSG 213
>pdb|3KB7|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 311
Score = 49.3 bits (116), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 64/270 (23%), Positives = 110/270 (40%), Gaps = 48/270 (17%)
Query: 97 LGEGGFGPVYKGVLKKGDEIAVKRLPGRS----GQGLREMKNEASVIAKVQHKNLVRLLG 152
LG+GGF ++ E+ ++ +S +M E S+ + H+++V G
Sbjct: 25 LGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHG 84
Query: 153 CCIDKDEKILIYEYMPNKSLDFFLFDPTKRMLLDWSANYSSR------------------ 194
D D ++ E +SL ++ L + A Y R
Sbjct: 85 FFEDNDFVFVVLELCRRRSL--LELHKRRKALTEPEARYYLRQIVLGCQYLHRNRVIHRD 142
Query: 195 LKVSNILLDKDINPKISDFGMARICGGNELQANTSRIVGTYGYMSPEYAIQGIFSIKSDV 254
LK+ N+ L++D+ KI DFG+A + + T + GT Y++PE + S + DV
Sbjct: 143 LKLGNLFLNEDLEVKIGDFGLATKVEYDGERKKT--LCGTPNYIAPEVLSKKGHSFEVDV 200
Query: 255 FSFGVLLLEIVSGKKTTGFYRTDSLTLLGYAWDLWTSNRTLELIDPILEDEYS-SKHMLL 313
+S G ++ ++ GK + T L E I ++EYS KH+
Sbjct: 201 WSIGCIMYTLLVGKPP---FETSCLK---------------ETYLRIKKNEYSIPKHINP 242
Query: 314 RYVNIALLCVQESADDRPTMNEVVSMLTDE 343
++ +Q RPT+NE +L DE
Sbjct: 243 VAASLIQKMLQTDPTARPTINE---LLNDE 269
>pdb|2B9H|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Ste7
pdb|2B9I|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Msg5
pdb|2B9J|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Far1
pdb|2F49|A Chain A, Crystal Structure Of Fus3 In Complex With A Ste5 Peptide
pdb|2F49|B Chain B, Crystal Structure Of Fus3 In Complex With A Ste5 Peptide
pdb|2FA2|A Chain A, Crystal Structure Of Fus3 Without A Peptide From Ste5
pdb|2FA2|B Chain B, Crystal Structure Of Fus3 Without A Peptide From Ste5
Length = 353
Score = 49.3 bits (116), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 48/215 (22%), Positives = 97/215 (45%), Gaps = 38/215 (17%)
Query: 84 VSTATNKFSDANKLGEGGFGPVYKGVLKK-GDEIAVKRL-----PGRSGQGLREMKNEAS 137
V ++ F + LGEG +G V K G+ +A+K++ P + + LRE+K
Sbjct: 6 VYNISSDFQLKSLLGEGAYGVVCSATHKPTGEIVAIKKIEPFDKPLFALRTLREIK---- 61
Query: 138 VIAKVQHKNLVRLLGC-----------------CIDKD-EKILIYEYMPNKSLDFFLFDP 179
++ +H+N++ + + D +++ + + + + +F++
Sbjct: 62 ILKHFKHENIITIFNIQRPDSFENFNEVYIIQELMQTDLHRVISTQMLSDDHIQYFIYQT 121
Query: 180 TKRMLLDWSANYSSR-LKVSNILLDKDINPKISDFGMARICGGNEL--------QANTSR 230
+ + + +N R LK SN+L++ + + K+ DFG+ARI + Q+
Sbjct: 122 LRAVKVLHGSNVIHRDLKPSNLLINSNCDLKVCDFGLARIIDESAADNSEPTGQQSGMVE 181
Query: 231 IVGTYGYMSPEYAIQGI-FSIKSDVFSFGVLLLEI 264
V T Y +PE + +S DV+S G +L E+
Sbjct: 182 FVATRWYRAPEVMLTSAKYSRAMDVWSCGCILAEL 216
>pdb|3ZH8|A Chain A, A Novel Small Molecule Apkc Inhibitor
pdb|3ZH8|B Chain B, A Novel Small Molecule Apkc Inhibitor
pdb|3ZH8|C Chain C, A Novel Small Molecule Apkc Inhibitor
Length = 349
Score = 49.3 bits (116), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 49/195 (25%), Positives = 82/195 (42%), Gaps = 27/195 (13%)
Query: 97 LGEGGFGPVYKGVLKKGDEI----AVKRLPGRSGQGLREMKNEASVIAKV-QHKNLVRLL 151
+G G + V LKK D I VK+ + + ++ E V + H LV L
Sbjct: 13 IGRGSYAKVLLVRLKKTDRIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVGLH 72
Query: 152 GCCIDKDEKILIYEYMPNKSLDFFLFDPTKRMLLDWSANYSSR----------------- 194
C + + EY+ L F + +R L + A + S
Sbjct: 73 SCFQTESRLFFVIEYVNGGDLMFHM--QRQRKLPEEHARFYSAEISLALNYLHERGIIYR 130
Query: 195 -LKVSNILLDKDINPKISDFGMARICGGNELQANTSRIVGTYGYMSPEYAIQGIFSIKSD 253
LK+ N+LLD + + K++D+GM + G TS GT Y++PE + D
Sbjct: 131 DLKLDNVLLDSEGHIKLTDYGMCK--EGLRPGDTTSXFCGTPNYIAPEILRGEDYGFSVD 188
Query: 254 VFSFGVLLLEIVSGK 268
++ GVL+ E+++G+
Sbjct: 189 WWALGVLMFEMMAGR 203
>pdb|3NPC|A Chain A, Crystal Structure Of Jnk2 Complexed With Birb796
pdb|3NPC|B Chain B, Crystal Structure Of Jnk2 Complexed With Birb796
Length = 364
Score = 49.3 bits (116), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 53/209 (25%), Positives = 91/209 (43%), Gaps = 29/209 (13%)
Query: 83 SVSTATNKFSDANKLGEGGFGPV---YKGVLKKGDEIAVKRL--PGRSGQGLREMKNEAS 137
S T ++ +G G G V + VL G +AVK+L P ++ + E
Sbjct: 18 STFTVLKRYQQLKPIGSGAQGIVCAAFDTVL--GINVAVKKLSRPFQNQTHAKRAYRELV 75
Query: 138 VIAKVQHKNLVRLLGC------------------CIDKDEKILIYEYMPNKSLDFFLFDP 179
++ V HKN++ LL +D + +I+ + ++ + + L+
Sbjct: 76 LLKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIHMELDHERMSYLLYQM 135
Query: 180 TKRMLLDWSANYSSR-LKVSNILLDKDINPKISDFGMARICGGNELQANTSRIVGTYGYM 238
+ SA R LK SNI++ D KI DFG+AR N + T +V Y Y
Sbjct: 136 LCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTACTNFMM--TPYVVTRY-YR 192
Query: 239 SPEYAIQGIFSIKSDVFSFGVLLLEIVSG 267
+PE + ++ D++S G ++ E+V G
Sbjct: 193 APEVILGMGYAANVDIWSVGCIMGELVKG 221
>pdb|3A8W|A Chain A, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8W|B Chain B, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8X|A Chain A, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8X|B Chain B, Crystal Structure Of Pkciota Kinase Domain
Length = 345
Score = 49.3 bits (116), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 49/195 (25%), Positives = 82/195 (42%), Gaps = 27/195 (13%)
Query: 97 LGEGGFGPVYKGVLKKGDEI----AVKRLPGRSGQGLREMKNEASVIAKV-QHKNLVRLL 151
+G G + V LKK D I VK+ + + ++ E V + H LV L
Sbjct: 17 IGRGSYAKVLLVRLKKTDRIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVGLH 76
Query: 152 GCCIDKDEKILIYEYMPNKSLDFFLFDPTKRMLLDWSANYSSR----------------- 194
C + + EY+ L F + +R L + A + S
Sbjct: 77 SCFQTESRLFFVIEYVNGGDLMFHM--QRQRKLPEEHARFYSAEISLALNYLHERGIIYR 134
Query: 195 -LKVSNILLDKDINPKISDFGMARICGGNELQANTSRIVGTYGYMSPEYAIQGIFSIKSD 253
LK+ N+LLD + + K++D+GM + G TS GT Y++PE + D
Sbjct: 135 DLKLDNVLLDSEGHIKLTDYGMCK--EGLRPGDTTSXFCGTPNYIAPEILRGEDYGFSVD 192
Query: 254 VFSFGVLLLEIVSGK 268
++ GVL+ E+++G+
Sbjct: 193 WWALGVLMFEMMAGR 207
>pdb|3ZGW|A Chain A, Crystal Structure Of Maternal Embryonic Leucine Zipper
Kinase (melk) In Complex With Amp-pnp
Length = 347
Score = 49.3 bits (116), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 49/191 (25%), Positives = 87/191 (45%), Gaps = 22/191 (11%)
Query: 97 LGEGGFGPVYKGV-LKKGDEIAVKRLPGRS-GQGLREMKNEASVIAKVQHKNLVRLLGCC 154
+G GGF V + G+ +A+K + + G L +K E + ++H+++ +L
Sbjct: 18 IGTGGFAKVKLACHILTGEMVAIKIMDKNTLGSDLPRIKTEIEALKNLRHQHICQLYHVL 77
Query: 155 IDKDEKILIYEYMPNKSL-DFF-----LFDPTKRMLLD---------WSANYSSR-LKVS 198
++ ++ EY P L D+ L + R++ S Y+ R LK
Sbjct: 78 ETANKIFMVLEYCPGGELFDYIISQDRLSEEETRVVFRQIVSAVAYVHSQGYAHRDLKPE 137
Query: 199 NILLDKDINPKISDFGMARICGGNELQANTSRIVGTYGYMSPEYAIQG--IFSIKSDVFS 256
N+L D+ K+ DFG+ GN+ + G+ Y +PE IQG ++DV+S
Sbjct: 138 NLLFDEYHKLKLIDFGLCAKPKGNK-DYHLQTCCGSLAYAAPE-LIQGKSYLGSEADVWS 195
Query: 257 FGVLLLEIVSG 267
G+LL ++ G
Sbjct: 196 MGILLYVLMCG 206
>pdb|4E7W|A Chain A, Structure Of Gsk3 From Ustilago Maydis
Length = 394
Score = 49.3 bits (116), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 53/205 (25%), Positives = 90/205 (43%), Gaps = 34/205 (16%)
Query: 91 FSDANKLGEGGFGPVYKGVLKKGDEIAVKRLPGRSGQGLREMKNEASVIAKVQHKNLVRL 150
+++ +G G FG V++ L + DE+A+K++ Q R E ++ V+H N+V L
Sbjct: 42 YTNCKVIGNGSFGVVFQAKLVESDEVAIKKV----LQDKRFKNRELQIMRIVKHPNVVDL 97
Query: 151 LGCCI---DKDEKI---LIYEYMPN----KSLDFFLFDPTKRMLLDWSANYSSRLKVSNI 200
DK +++ L+ EY+P S + T MLL Y ++ I
Sbjct: 98 KAFFYSNGDKKDEVFLNLVLEYVPETVYRASRHYAKLKQTMPMLLIKLYMYQLLRSLAYI 157
Query: 201 ----LLDKDINP------------KISDFGMARICGGNELQANTSRIVGTYGYMSPEYAI 244
+ +DI P K+ DFG A+I E N S I Y Y +PE
Sbjct: 158 HSIGICHRDIKPQNLLLDPPSGVLKLIDFGSAKILIAGE--PNVSXICSRY-YRAPELIF 214
Query: 245 QGI-FSIKSDVFSFGVLLLEIVSGK 268
++ D++S G ++ E++ G+
Sbjct: 215 GATNYTTNIDIWSTGCVMAELMQGQ 239
>pdb|3THB|A Chain A, Structure Of Plk1 Kinase Domain In Complex With A
Benzolactam-Derived Inhibitor
Length = 333
Score = 49.3 bits (116), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 64/273 (23%), Positives = 112/273 (41%), Gaps = 54/273 (19%)
Query: 97 LGEGGFGPVYKGVLKKGDEIAVKRLPGRS----GQGLREMKNEASVIAKVQHKNLVRLLG 152
LG+GGF ++ E+ ++ +S +M E S+ + H+++V G
Sbjct: 47 LGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHG 106
Query: 153 CCIDKDEKILIYEYMPNKSLDFFLFDPTKRMLLDWSANYSSR------------------ 194
D D ++ E +SL ++ L + A Y R
Sbjct: 107 FFEDNDFVFVVLELCRRRSL--LELHKRRKALTEPEARYYLRQIVLGCQYLHRNRVIHRD 164
Query: 195 LKVSNILLDKDINPKISDFGMARICGGNELQANTSR---IVGTYGYMSPEYAIQGIFSIK 251
LK+ N+ L++D+ KI DFG+A +++ + R + GT Y++PE + S +
Sbjct: 165 LKLGNLFLNEDLEVKIGDFGLA-----TKVEYDGERKKVLCGTPNYIAPEVLSKKGHSFE 219
Query: 252 SDVFSFGVLLLEIVSGKKTTGFYRTDSLTLLGYAWDLWTSNRTLELIDPILEDEYS-SKH 310
DV+S G ++ ++ GK + T L E I ++EYS KH
Sbjct: 220 VDVWSIGCIMYTLLVGKPP---FETSCLK---------------ETYLRIKKNEYSIPKH 261
Query: 311 MLLRYVNIALLCVQESADDRPTMNEVVSMLTDE 343
+ ++ +Q RPT+NE +L DE
Sbjct: 262 INPVAASLIQKMLQTDPTARPTINE---LLNDE 291
>pdb|3GU8|A Chain A, Crystal Structure Of Dapkl93g With N6-Cyclopentyladenosine
pdb|3GUB|A Chain A, Crystal Structure Of Dapkl93g Complexed With N6-(2-
Phenylethyl)adenosine
Length = 295
Score = 48.9 bits (115), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 55/207 (26%), Positives = 94/207 (45%), Gaps = 36/207 (17%)
Query: 91 FSDANKLGEGGFGPVYKGVLKK-GDEIAVKRLP------GRSGQGLREMKNEASVIAKVQ 143
+ +LG G F V K K G + A K + R G +++ E S++ ++Q
Sbjct: 13 YDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQ 72
Query: 144 HKNLVRLLGCCIDKDEKILIYEYMPNKSLDFFLFDPTKRMLLDWSAN-----------YS 192
H N++ L +K + ILI E + L F F K L + A Y
Sbjct: 73 HPNVITLHEVYENKTDVILIGELVAGGEL--FDFLAEKESLTEEEATEFLKQILNGVYYL 130
Query: 193 SRLKVSN--------ILLDKDI---NPKISDFGMA-RICGGNELQANTSRIVGTYGYMSP 240
L++++ +LLD+++ KI DFG+A +I GNE + I GT +++P
Sbjct: 131 HSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFK----NIFGTPEFVAP 186
Query: 241 EYAIQGIFSIKSDVFSFGVLLLEIVSG 267
E +++D++S GV+ ++SG
Sbjct: 187 EIVNYEPLGLEADMWSIGVITYILLSG 213
>pdb|3FV8|A Chain A, Jnk3 Bound To Piperazine Amide Inhibitor, Sr2774
Length = 355
Score = 48.9 bits (115), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 52/210 (24%), Positives = 91/210 (43%), Gaps = 29/210 (13%)
Query: 83 SVSTATNKFSDANKLGEGGFGPV---YKGVLKKGDEIAVKRL--PGRSGQGLREMKNEAS 137
S T ++ + +G G G V Y VL + +A+K+L P ++ + E
Sbjct: 18 STFTVLKRYQNLKPIGSGAQGIVCAAYDAVLDRN--VAIKKLSRPFQNQTHAKRAYRELV 75
Query: 138 VIAKVQHKNLVRLLGC------------------CIDKDEKILIYEYMPNKSLDFFLFDP 179
++ V HKN++ LL +D + +I + ++ + + L+
Sbjct: 76 LMKXVNHKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLXQVIQMELDHERMSYLLYQM 135
Query: 180 TKRMLLDWSANYSSR-LKVSNILLDKDINPKISDFGMARICGGNELQANTSRIVGTYGYM 238
+ SA R LK SNI++ D KI DFG+AR G + + T +V Y Y
Sbjct: 136 LCGIKHLHSAGIIHRDLKPSNIVVKSDXTLKILDFGLARTAGTSFMM--TPYVVTRY-YR 192
Query: 239 SPEYAIQGIFSIKSDVFSFGVLLLEIVSGK 268
+PE + + D++S G ++ E+V K
Sbjct: 193 APEVILGMGYKENVDIWSVGCIMGEMVRHK 222
>pdb|2OU7|A Chain A, Structure Of The Catalytic Domain Of Human Polo-Like
Kinase 1
pdb|2OWB|A Chain A, Structure Of The Catalytic Domain Of Human Polo-Like
Kinase 1
pdb|3FC2|A Chain A, Plk1 In Complex With Bi6727
Length = 335
Score = 48.9 bits (115), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 64/273 (23%), Positives = 112/273 (41%), Gaps = 54/273 (19%)
Query: 97 LGEGGFGPVYKGVLKKGDEIAVKRLPGRS----GQGLREMKNEASVIAKVQHKNLVRLLG 152
LG+GGF ++ E+ ++ +S +M E S+ + H+++V G
Sbjct: 49 LGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHG 108
Query: 153 CCIDKDEKILIYEYMPNKSLDFFLFDPTKRMLLDWSANYSSR------------------ 194
D D ++ E +SL ++ L + A Y R
Sbjct: 109 FFEDNDFVFVVLELCRRRSL--LELHKRRKALTEPEARYYLRQIVLGCQYLHRNRVIHRD 166
Query: 195 LKVSNILLDKDINPKISDFGMARICGGNELQANTSR---IVGTYGYMSPEYAIQGIFSIK 251
LK+ N+ L++D+ KI DFG+A +++ + R + GT Y++PE + S +
Sbjct: 167 LKLGNLFLNEDLEVKIGDFGLA-----TKVEYDGERKKVLCGTPNYIAPEVLSKKGHSFE 221
Query: 252 SDVFSFGVLLLEIVSGKKTTGFYRTDSLTLLGYAWDLWTSNRTLELIDPILEDEYS-SKH 310
DV+S G ++ ++ GK + T L E I ++EYS KH
Sbjct: 222 VDVWSIGCIMYTLLVGKPP---FETSCLK---------------ETYLRIKKNEYSIPKH 263
Query: 311 MLLRYVNIALLCVQESADDRPTMNEVVSMLTDE 343
+ ++ +Q RPT+NE +L DE
Sbjct: 264 INPVAASLIQKMLQTDPTARPTINE---LLNDE 293
>pdb|2RKU|A Chain A, Structure Of Plk1 In Complex With Bi2536
Length = 294
Score = 48.9 bits (115), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 64/273 (23%), Positives = 112/273 (41%), Gaps = 54/273 (19%)
Query: 97 LGEGGFGPVYKGVLKKGDEIAVKRLPGRS----GQGLREMKNEASVIAKVQHKNLVRLLG 152
LG+GGF ++ E+ ++ +S +M E S+ + H+++V G
Sbjct: 23 LGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHG 82
Query: 153 CCIDKDEKILIYEYMPNKSLDFFLFDPTKRMLLDWSANYSSR------------------ 194
D D ++ E +SL ++ L + A Y R
Sbjct: 83 FFEDNDFVFVVLELCRRRSL--LELHKRRKALTEPEARYYLRQIVLGCQYLHRNRVIHRD 140
Query: 195 LKVSNILLDKDINPKISDFGMARICGGNELQANTSR---IVGTYGYMSPEYAIQGIFSIK 251
LK+ N+ L++D+ KI DFG+A +++ + R + GT Y++PE + S +
Sbjct: 141 LKLGNLFLNEDLEVKIGDFGLA-----TKVEYDGERKKVLCGTPNYIAPEVLSKKGHSFE 195
Query: 252 SDVFSFGVLLLEIVSGKKTTGFYRTDSLTLLGYAWDLWTSNRTLELIDPILEDEYS-SKH 310
DV+S G ++ ++ GK + T L E I ++EYS KH
Sbjct: 196 VDVWSIGCIMYTLLVGKPP---FETSCLK---------------ETYLRIKKNEYSIPKH 237
Query: 311 MLLRYVNIALLCVQESADDRPTMNEVVSMLTDE 343
+ ++ +Q RPT+NE +L DE
Sbjct: 238 INPVAASLIQKMLQTDPTARPTINE---LLNDE 267
>pdb|3KVX|A Chain A, Jnk3 Bound To Aminopyrimidine Inhibitor, Sr-3562
Length = 364
Score = 48.9 bits (115), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 52/210 (24%), Positives = 91/210 (43%), Gaps = 29/210 (13%)
Query: 83 SVSTATNKFSDANKLGEGGFGPV---YKGVLKKGDEIAVKRL--PGRSGQGLREMKNEAS 137
S T ++ + +G G G V Y VL + +A+K+L P ++ + E
Sbjct: 18 STFTVLKRYQNLKPIGSGAQGIVCAAYDAVLDRN--VAIKKLSRPFQNQTHAKRAYRELV 75
Query: 138 VIAKVQHKNLVRLLGC------------------CIDKDEKILIYEYMPNKSLDFFLFDP 179
++ V HKN++ LL +D + +I + ++ + + L+
Sbjct: 76 LMKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLXQVIQMELDHERMSYLLYQM 135
Query: 180 TKRMLLDWSANYSSR-LKVSNILLDKDINPKISDFGMARICGGNELQANTSRIVGTYGYM 238
+ SA R LK SNI++ D KI DFG+AR G + + T +V Y Y
Sbjct: 136 LXGIKHLHSAGIIHRDLKPSNIVVKSDXTLKILDFGLARTAGTSFMM--TPYVVTRY-YR 192
Query: 239 SPEYAIQGIFSIKSDVFSFGVLLLEIVSGK 268
+PE + + D++S G ++ E+V K
Sbjct: 193 APEVILGMGYKENVDIWSVGCIMGEMVRHK 222
>pdb|2YA9|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
pdb|2YA9|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
pdb|2YAA|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Atp
pdb|2YAA|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Atp
pdb|2YAB|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Amp
pdb|2YAB|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Amp
Length = 361
Score = 48.9 bits (115), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 55/203 (27%), Positives = 92/203 (45%), Gaps = 34/203 (16%)
Query: 94 ANKLGEGGFGPVYKGVLKK-GDEIAVKRLPGRSGQGLR------EMKNEASVIAKVQHKN 146
+LG G F V K K G E A K + R + R E++ E S++ +V H N
Sbjct: 17 GEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVCREEIEREVSILRQVLHPN 76
Query: 147 LVRLLGCCIDKDEKILIYEYMPNKSLDFFLFDPTK----------RMLLDWSANYSSRLK 196
++ L ++ + +LI E + L FL + +LD NY K
Sbjct: 77 IITLHDVYENRTDVVLILELVSGGELFDFLAQKESLSEEEATSFIKQILD-GVNYLHTKK 135
Query: 197 VSN--------ILLDKDI---NPKISDFGMAR-ICGGNELQANTSRIVGTYGYMSPEYAI 244
+++ +LLDK+I + K+ DFG+A I G E + I GT +++PE
Sbjct: 136 IAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGVEFK----NIFGTPEFVAPEIVN 191
Query: 245 QGIFSIKSDVFSFGVLLLEIVSG 267
+++D++S GV+ ++SG
Sbjct: 192 YEPLGLEADMWSIGVITYILLSG 214
>pdb|3SLS|A Chain A, Crystal Structure Of Human Mek-1 Kinase In Complex With
Ucb1353770 And Amppnp
pdb|3SLS|B Chain B, Crystal Structure Of Human Mek-1 Kinase In Complex With
Ucb1353770 And Amppnp
Length = 304
Score = 48.9 bits (115), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 51/207 (24%), Positives = 86/207 (41%), Gaps = 31/207 (14%)
Query: 89 NKFSDANKLGEGGFGPVYKGVLKKGDEIAVKRL------PGRSGQGLREMKNEASVIAKV 142
+ F ++LG G G V+K K + ++L P Q +RE++ V+ +
Sbjct: 25 DDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQ----VLHEC 80
Query: 143 QHKNLVRLLGCCIDKDEKILIYEYMPNKSLDFFLFDPTK-----------------RMLL 185
+V G E + E+M SLD L + L
Sbjct: 81 NSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQILGKVSIAVIKGLTYLR 140
Query: 186 DWSANYSSRLKVSNILLDKDINPKISDFGMARICGGNELQANTSRIVGTYGYMSPEYAIQ 245
+ +K SNIL++ K+ DFG++ G + + + VGT YMSPE
Sbjct: 141 EKHKIMHRDVKPSNILVNSRGEIKLCDFGVS----GQLIDSMANSFVGTRSYMSPERLQG 196
Query: 246 GIFSIKSDVFSFGVLLLEIVSGKKTTG 272
+S++SD++S G+ L+E+ G+ G
Sbjct: 197 THYSVQSDIWSMGLSLVEMAVGRYPIG 223
>pdb|2R9S|A Chain A, C-Jun N-Terminal Kinase 3 With 3,5-Disubstituted Quinoline
Inhibitor
pdb|2R9S|B Chain B, C-Jun N-Terminal Kinase 3 With 3,5-Disubstituted Quinoline
Inhibitor
Length = 356
Score = 48.9 bits (115), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 52/210 (24%), Positives = 91/210 (43%), Gaps = 29/210 (13%)
Query: 83 SVSTATNKFSDANKLGEGGFGPV---YKGVLKKGDEIAVKRL--PGRSGQGLREMKNEAS 137
S T ++ + +G G G V Y VL + +A+K+L P ++ + E
Sbjct: 11 STFTVLKRYQNLKPIGSGAQGIVCAAYDAVLDRN--VAIKKLSRPFQNQTHAKRAYRELV 68
Query: 138 VIAKVQHKNLVRLLGC------------------CIDKDEKILIYEYMPNKSLDFFLFDP 179
++ V HKN++ LL +D + +I + ++ + + L+
Sbjct: 69 LMKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLXQVIQMELDHERMSYLLYQM 128
Query: 180 TKRMLLDWSANYSSR-LKVSNILLDKDINPKISDFGMARICGGNELQANTSRIVGTYGYM 238
+ SA R LK SNI++ D KI DFG+AR G + + T +V Y Y
Sbjct: 129 LXGIKHLHSAGIIHRDLKPSNIVVKSDXTLKILDFGLARTAGTSFMM--TPYVVTRY-YR 185
Query: 239 SPEYAIQGIFSIKSDVFSFGVLLLEIVSGK 268
+PE + + D++S G ++ E+V K
Sbjct: 186 APEVILGMGYKENVDIWSVGCIMGEMVRHK 215
>pdb|4AAA|A Chain A, Crystal Structure Of The Human Cdkl2 Kinase Domain
pdb|4BBM|A Chain A, Crystal Structure Of The Human Cdkl2 Kinase Domain With
Bound Tcs 2312
pdb|4BBM|B Chain B, Crystal Structure Of The Human Cdkl2 Kinase Domain With
Bound Tcs 2312
Length = 331
Score = 48.9 bits (115), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 52/203 (25%), Positives = 94/203 (46%), Gaps = 24/203 (11%)
Query: 87 ATNKFSDANKLGEGGFGPVYKGVLKK-GDEIAVKR-LPGRSGQGLREMK-NEASVIAKVQ 143
+ K+ + +GEG +G V K K G +A+K+ L + ++++ E ++ +++
Sbjct: 23 SMEKYENLGLVGEGSYGMVMKCRNKDTGRIVAIKKFLESDDDKMVKKIAMREIKLLKQLR 82
Query: 144 HKNLVRLLGCCIDKDEKILIYEYMPNKSLD---------------FFLFDPTKRMLLDWS 188
H+NLV LL C K L++E++ + LD +LF + S
Sbjct: 83 HENLVNLLEVCKKKKRWYLVFEFVDHTILDDLELFPNGLDYQVVQKYLFQIINGIGFCHS 142
Query: 189 ANYSSR-LKVSNILLDKDINPKISDFGMAR-ICGGNELQANTSRIVGTYGYMSPEYAIQG 246
N R +K NIL+ + K+ DFG AR + E+ + V T Y +PE +
Sbjct: 143 HNIIHRDIKPENILVSQSGVVKLCDFGFARTLAAPGEVYDDE---VATRWYRAPELLVGD 199
Query: 247 I-FSIKSDVFSFGVLLLEIVSGK 268
+ + DV++ G L+ E+ G+
Sbjct: 200 VKYGKAVDVWAIGCLVTEMFMGE 222
>pdb|1YW2|A Chain A, Mutated Mus Musculus P38 Kinase (Mp38)
Length = 360
Score = 48.5 bits (114), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 49/224 (21%), Positives = 101/224 (45%), Gaps = 31/224 (13%)
Query: 83 SVSTATNKFSDANKLGEGGFGPVYKGV-LKKGDEIAVKRL--PGRSGQGLREMKNEASVI 139
++ ++ + + +G G +G V K G +AVK+L P +S + E ++
Sbjct: 16 TIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLL 75
Query: 140 AKVQHKNLVRLLGC-----CIDKDEKILIYEYMPNKSLD--------------FFLFDPT 180
++H+N++ LL +++ + + ++ L+ F ++
Sbjct: 76 KHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQIL 135
Query: 181 KRMLLDWSANYSSR-LKVSNILLDKDINPKISDFGMARICGGNELQANTSRIVGTYGYMS 239
+ + SA+ R LK SN+ +++D KI DFG+AR + V T Y +
Sbjct: 136 RGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLAR-----HTDDEMAGFVATRWYRA 190
Query: 240 PEYAIQGI-FSIKSDVFSFGVLLLEIVSGKKTTGFYRTDSLTLL 282
PE + + ++ D++S G ++ E+++G+ T F TD + L
Sbjct: 191 PEIMLNWMHYNQTVDIWSVGCIMAELLTGR--TLFPGTDHIDQL 232
>pdb|1YWR|A Chain A, Crystal Structure Analysis Of Inactive P38 Kinase Domain
In Complex With A Monocyclic Pyrazolone Inhibitor
Length = 360
Score = 48.5 bits (114), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 49/224 (21%), Positives = 101/224 (45%), Gaps = 31/224 (13%)
Query: 83 SVSTATNKFSDANKLGEGGFGPVYKGV-LKKGDEIAVKRL--PGRSGQGLREMKNEASVI 139
++ ++ + + +G G +G V K G +AVK+L P +S + E ++
Sbjct: 16 TIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLL 75
Query: 140 AKVQHKNLVRLLGC-----CIDKDEKILIYEYMPNKSLD--------------FFLFDPT 180
++H+N++ LL +++ + + ++ L+ F ++
Sbjct: 76 KHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQIL 135
Query: 181 KRMLLDWSANYSSR-LKVSNILLDKDINPKISDFGMARICGGNELQANTSRIVGTYGYMS 239
+ + SA+ R LK SN+ +++D KI DFG+AR + V T Y +
Sbjct: 136 RGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLAR-----HTDDEMAGFVATRWYRA 190
Query: 240 PEYAIQGI-FSIKSDVFSFGVLLLEIVSGKKTTGFYRTDSLTLL 282
PE + + ++ D++S G ++ E+++G+ T F TD + L
Sbjct: 191 PEIMLNWMHYNQTVDIWSVGCIMAELLTGR--TLFPGTDHIDQL 232
>pdb|2A2A|A Chain A, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|B Chain B, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|C Chain C, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|D Chain D, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2CKE|A Chain A, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|B Chain B, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|C Chain C, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|D Chain D, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
Length = 321
Score = 48.5 bits (114), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 55/203 (27%), Positives = 92/203 (45%), Gaps = 34/203 (16%)
Query: 94 ANKLGEGGFGPVYKGVLKK-GDEIAVKRLPGRSGQGLR------EMKNEASVIAKVQHKN 146
+LG G F V K K G E A K + R + R E++ E S++ +V H N
Sbjct: 17 GEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSILRQVLHHN 76
Query: 147 LVRLLGCCIDKDEKILIYEYMPNKSLDFFLFDPTK----------RMLLDWSANYSSRLK 196
++ L ++ + +LI E + L FL + +LD NY K
Sbjct: 77 VITLHDVYENRTDVVLILELVSGGELFDFLAQKESLSEEEATSFIKQILD-GVNYLHTKK 135
Query: 197 VSN--------ILLDKDI---NPKISDFGMAR-ICGGNELQANTSRIVGTYGYMSPEYAI 244
+++ +LLDK+I + K+ DFG+A I G E + I GT +++PE
Sbjct: 136 IAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGVEFK----NIFGTPEFVAPEIVN 191
Query: 245 QGIFSIKSDVFSFGVLLLEIVSG 267
+++D++S GV+ ++SG
Sbjct: 192 YEPLGLEADMWSIGVITYILLSG 214
>pdb|4AE9|A Chain A, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit C Alpha 2
pdb|4AE9|B Chain B, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit C Alpha 2
Length = 343
Score = 48.5 bits (114), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 50/199 (25%), Positives = 90/199 (45%), Gaps = 25/199 (12%)
Query: 89 NKFSDANKLGEGGFGPVYKGVLKK-GDEIAVKRLPGRSGQGLREMK---NEASVIAKVQH 144
++F LG G FG V K+ G+ A+K L + L++++ NE ++ V
Sbjct: 34 DQFERIKTLGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 93
Query: 145 KNLVRLLGCCIDKDEKILIYEYMPNKSLDFFL------FDPTKR-----MLLDWSANYS- 192
LV+L D ++ EY+P + L +P R ++L + +S
Sbjct: 94 PFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFXEPHARFYAAQIVLTFEYLHSL 153
Query: 193 ----SRLKVSNILLDKDINPKISDFGMARICGGNELQANTSRIVGTYGYMSPEYAIQGIF 248
LK N+L+D+ +++DFG A+ G T + GT Y++PE + +
Sbjct: 154 DLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGR-----TWXLCGTPEYLAPEIILSKGY 208
Query: 249 SIKSDVFSFGVLLLEIVSG 267
+ D ++ GVL+ E+ +G
Sbjct: 209 NKAVDWWALGVLIYEMAAG 227
>pdb|1Q8W|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase In
Complex With Rho-Kinase Inhibitor Fasudil (Ha-1077)
pdb|1XH4|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|3BWJ|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Lead Compound Arc-1034
pdb|3KKV|A Chain A, Structure Of Pka With A Protein Kinase B-Selective
Inhibitor
Length = 350
Score = 48.5 bits (114), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 49/199 (24%), Positives = 90/199 (45%), Gaps = 25/199 (12%)
Query: 89 NKFSDANKLGEGGFGPVY-KGVLKKGDEIAVKRLPGRSGQGLREMK---NEASVIAKVQH 144
++F LG G FG V ++ G+ A+K L + L++++ NE ++ V
Sbjct: 41 DQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 100
Query: 145 KNLVRLLGCCIDKDEKILIYEYMPNKSLDFFL------FDPTKR-----MLLDWSANYS- 192
LV+L D ++ EY+P + L +P R ++L + +S
Sbjct: 101 PFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFXEPHARFYAAQIVLTFEYLHSL 160
Query: 193 ----SRLKVSNILLDKDINPKISDFGMARICGGNELQANTSRIVGTYGYMSPEYAIQGIF 248
LK N+L+D+ +++DFG A+ G T + GT Y++PE + +
Sbjct: 161 DLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGR-----TWXLCGTPEYLAPEIILSKGY 215
Query: 249 SIKSDVFSFGVLLLEIVSG 267
+ D ++ GVL+ E+ +G
Sbjct: 216 NKAVDWWALGVLIYEMAAG 234
>pdb|2JDS|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
A- 443654
Length = 351
Score = 48.5 bits (114), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 49/199 (24%), Positives = 90/199 (45%), Gaps = 25/199 (12%)
Query: 89 NKFSDANKLGEGGFGPVY-KGVLKKGDEIAVKRLPGRSGQGLREMK---NEASVIAKVQH 144
++F LG G FG V ++ G+ A+K L + L++++ NE ++ V
Sbjct: 42 DQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 101
Query: 145 KNLVRLLGCCIDKDEKILIYEYMPNKSLDFFL------FDPTKR-----MLLDWSANYS- 192
LV+L D ++ EY+P + L +P R ++L + +S
Sbjct: 102 PFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFXEPHARFYAAQIVLTFEYLHSL 161
Query: 193 ----SRLKVSNILLDKDINPKISDFGMARICGGNELQANTSRIVGTYGYMSPEYAIQGIF 248
LK N+L+D+ +++DFG A+ G T + GT Y++PE + +
Sbjct: 162 DLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGR-----TWXLCGTPEYLAPEIILSKGY 216
Query: 249 SIKSDVFSFGVLLLEIVSG 267
+ D ++ GVL+ E+ +G
Sbjct: 217 NKAVDWWALGVLIYEMAAG 235
>pdb|3VUK|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M5 In Map
Kinase Jnk1
Length = 370
Score = 48.5 bits (114), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 50/209 (23%), Positives = 92/209 (44%), Gaps = 29/209 (13%)
Query: 83 SVSTATNKFSDANKLGEGGFGPV---YKGVLKKGDEIAVKRL--PGRSGQGLREMKNEAS 137
S T ++ + +G G G V Y +L++ +A+K+L P ++ + E
Sbjct: 18 STFTVLKRYQNLKPIGSGAQGIVCAAYDAILERN--VAIKKLSRPFQNQTHAKRAYRELV 75
Query: 138 VIAKVQHKNLVRLLGC------------------CIDKDEKILIYEYMPNKSLDFFLFDP 179
++ V HKN++ LL +D + +I + ++ + + L+
Sbjct: 76 LMKVVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLSQVIQMELDHERMSYLLYQM 135
Query: 180 TKRMLLDWSANYSSR-LKVSNILLDKDINPKISDFGMARICGGNELQANTSRIVGTYGYM 238
+ SA R LK SNI++ D KI DFG+AR G + + T +V Y Y
Sbjct: 136 LVGIKHLHSAGIIHRDLKPSNIVVKSDATLKILDFGLARTAGTSFMM--TPYVVTRY-YR 192
Query: 239 SPEYAIQGIFSIKSDVFSFGVLLLEIVSG 267
+PE + + D++S G ++ E++ G
Sbjct: 193 APEVILGMGYKENVDIWSVGCIMGEMIKG 221
>pdb|2Y4I|C Chain C, Ksr2-Mek1 Heterodimer
Length = 395
Score = 48.5 bits (114), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 50/203 (24%), Positives = 85/203 (41%), Gaps = 31/203 (15%)
Query: 89 NKFSDANKLGEGGFGPVYKGVLKKGDEIAVKRL------PGRSGQGLREMKNEASVIAKV 142
+ F ++LG G G V+K K + ++L P Q +RE++ V+ +
Sbjct: 68 DDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQ----VLHEC 123
Query: 143 QHKNLVRLLGCCIDKDEKILIYEYMPNKSLDFFLFDPTK-----------------RMLL 185
+V G E + E+M SLD L + L
Sbjct: 124 NSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQILGKVSIAVIKGLTYLR 183
Query: 186 DWSANYSSRLKVSNILLDKDINPKISDFGMARICGGNELQANTSRIVGTYGYMSPEYAIQ 245
+ +K SNIL++ K+ DFG++ G + + + VGT YMSPE
Sbjct: 184 EKHKIMHRDVKPSNILVNSRGEIKLCDFGVS----GQLIDSMANSFVGTRSYMSPERLQG 239
Query: 246 GIFSIKSDVFSFGVLLLEIVSGK 268
+S++SD++S G+ L+E+ G+
Sbjct: 240 THYSVQSDIWSMGLSLVEMAVGR 262
>pdb|1XH7|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 48.5 bits (114), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 49/199 (24%), Positives = 90/199 (45%), Gaps = 25/199 (12%)
Query: 89 NKFSDANKLGEGGFGPVY-KGVLKKGDEIAVKRLPGRSGQGLREMK---NEASVIAKVQH 144
++F LG G FG V ++ G+ A+K L + L++++ NE ++ V
Sbjct: 41 DQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 100
Query: 145 KNLVRLLGCCIDKDEKILIYEYMPNKSLDFFL------FDPTKR-----MLLDWSANYS- 192
LV+L D ++ EY+P + L +P R ++L + +S
Sbjct: 101 PFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFXEPHARFYAAQIVLTFEYLHSL 160
Query: 193 ----SRLKVSNILLDKDINPKISDFGMARICGGNELQANTSRIVGTYGYMSPEYAIQGIF 248
LK N+L+D+ +++DFG A+ G T + GT Y++PE + +
Sbjct: 161 DLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGR-----TWXLCGTPEYLAPEIILSKGY 215
Query: 249 SIKSDVFSFGVLLLEIVSG 267
+ D ++ GVL+ E+ +G
Sbjct: 216 NKAVDWWALGVLIYEMAAG 234
>pdb|2PML|X Chain X, Crystal Structure Of Pfpk7 In Complex With An Atp Analogue
pdb|2PMN|X Chain X, Crystal Structure Of Pfpk7 In Complex With An Atp-Site
Inhibitor
pdb|2PMO|X Chain X, Crystal Structure Of Pfpk7 In Complex With Hymenialdisine
Length = 348
Score = 48.5 bits (114), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 45/158 (28%), Positives = 74/158 (46%), Gaps = 31/158 (19%)
Query: 131 EMKNEASVIAKVQHKNLVRLLGCCIDKDEKILIYEYMPNKSL-----DFFLFDPT----- 180
+ KNE +I ++++ + G + DE +IYEYM N S+ FF+ D
Sbjct: 89 DFKNELQIITDIKNEYCLTCEGIITNYDEVYIIYEYMENDSILKFDEYFFVLDKNYTCFI 148
Query: 181 ---------KRMLLDWSANYSSR------LKVSNILLDKDINPKISDFGMARICGGNELQ 225
K +L +S ++ + +K SNIL+DK+ K+SDFG + +++
Sbjct: 149 PIQVIKCIIKSVLNSFSYIHNEKNICHRDVKPSNILMDKNGRVKLSDFGESEYMVDKKIK 208
Query: 226 ANTSRIVGTYGYMSPEYAIQ--GIFSIKSDVFSFGVLL 261
SR GTY +M PE+ K D++S G+ L
Sbjct: 209 G--SR--GTYEFMPPEFFSNESSYNGAKVDIWSLGICL 242
>pdb|2GHL|A Chain A, Mutant Mus Musculus P38 Kinase Domain In Complex With
Inhibitor Pg-874743
pdb|2GHM|A Chain A, Mutated Map Kinase P38 (Mus Musculus) In Complex With
Inhbitor Pg-895449
Length = 348
Score = 48.5 bits (114), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 49/224 (21%), Positives = 101/224 (45%), Gaps = 31/224 (13%)
Query: 83 SVSTATNKFSDANKLGEGGFGPVYKGV-LKKGDEIAVKRL--PGRSGQGLREMKNEASVI 139
++ ++ + + +G G +G V K G +AVK+L P +S + E ++
Sbjct: 12 TIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLL 71
Query: 140 AKVQHKNLVRLLGC-----CIDKDEKILIYEYMPNKSLD--------------FFLFDPT 180
++H+N++ LL +++ + + ++ L+ F ++
Sbjct: 72 KHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQIL 131
Query: 181 KRMLLDWSANYSSR-LKVSNILLDKDINPKISDFGMARICGGNELQANTSRIVGTYGYMS 239
+ + SA+ R LK SN+ +++D KI DFG+AR + V T Y +
Sbjct: 132 RGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLAR-----HTDDEMAGFVATRWYRA 186
Query: 240 PEYAIQGI-FSIKSDVFSFGVLLLEIVSGKKTTGFYRTDSLTLL 282
PE + + ++ D++S G ++ E+++G+ T F TD + L
Sbjct: 187 PEIMLNWMHYNQTVDIWSVGCIMAELLTGR--TLFPGTDHIDQL 228
>pdb|1SMH|A Chain A, Protein Kinase A Variant Complex With Completely Ordered
N- Terminal Helix
pdb|1XHA|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 48.5 bits (114), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 49/199 (24%), Positives = 90/199 (45%), Gaps = 25/199 (12%)
Query: 89 NKFSDANKLGEGGFGPVY-KGVLKKGDEIAVKRLPGRSGQGLREMK---NEASVIAKVQH 144
++F LG G FG V ++ G+ A+K L + L+E++ NE ++ V
Sbjct: 41 DQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKEIEHTLNEKRILQAVNF 100
Query: 145 KNLVRLLGCCIDKDEKILIYEYMPNKSLDFFL------FDPTKR-----MLLDWSANYS- 192
LV+L D ++ EY P + L +P R ++L + +S
Sbjct: 101 PFLVKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSL 160
Query: 193 ----SRLKVSNILLDKDINPKISDFGMARICGGNELQANTSRIVGTYGYMSPEYAIQGIF 248
LK N+++D+ +++DFG+A+ G T + GT Y++PE + +
Sbjct: 161 DLIYRDLKPENLMIDQQGYIQVTDFGLAKRVKGR-----TWXLCGTPEYLAPEIILSKGY 215
Query: 249 SIKSDVFSFGVLLLEIVSG 267
+ D ++ GVL+ E+ +G
Sbjct: 216 NKAVDWWALGVLIYEMAAG 234
>pdb|1Z9X|A Chain A, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
pdb|1Z9X|B Chain B, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
pdb|1Z9X|C Chain C, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
Length = 321
Score = 48.5 bits (114), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 55/203 (27%), Positives = 92/203 (45%), Gaps = 34/203 (16%)
Query: 94 ANKLGEGGFGPVYKGVLKK-GDEIAVKRLPGRSGQGLR------EMKNEASVIAKVQHKN 146
+LG G F V K K G E A K + R + R E++ E S++ +V H N
Sbjct: 17 GEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSILRQVLHHN 76
Query: 147 LVRLLGCCIDKDEKILIYEYMPNKSLDFFLFDPTK----------RMLLDWSANYSSRLK 196
++ L ++ + +LI E + L FL + +LD NY K
Sbjct: 77 VITLHDVYENRTDVVLILELVSGGELFDFLAQKESLSEEEATSFIKQILD-GVNYLHTKK 135
Query: 197 VSN--------ILLDKDI---NPKISDFGMAR-ICGGNELQANTSRIVGTYGYMSPEYAI 244
+++ +LLDK+I + K+ DFG+A I G E + I GT +++PE
Sbjct: 136 IAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGVEFK----NIFGTPEFVAPEIVN 191
Query: 245 QGIFSIKSDVFSFGVLLLEIVSG 267
+++D++S GV+ ++SG
Sbjct: 192 YEPLGLEADMWSIGVITYILLSG 214
>pdb|1SZM|A Chain A, Dual Binding Mode Of Bisindolylmaleimide 2 To Protein
Kinase A (Pka)
pdb|1SZM|B Chain B, Dual Binding Mode Of Bisindolylmaleimide 2 To Protein
Kinase A (Pka)
Length = 350
Score = 48.5 bits (114), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 49/199 (24%), Positives = 89/199 (44%), Gaps = 25/199 (12%)
Query: 89 NKFSDANKLGEGGFGPVY-KGVLKKGDEIAVKRLPGRSGQGLREMK---NEASVIAKVQH 144
++F LG G FG V ++ G+ A+K L + L++++ NE ++ V
Sbjct: 41 DQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 100
Query: 145 KNLVRLLGCCIDKDEKILIYEYMPNKSLDFFL------FDPTKR-----MLLDWSANYS- 192
LV+L D ++ EY P + L +P R ++L + +S
Sbjct: 101 PFLVKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFXEPHARFYAAQIVLTFEYLHSL 160
Query: 193 ----SRLKVSNILLDKDINPKISDFGMARICGGNELQANTSRIVGTYGYMSPEYAIQGIF 248
LK N+++D+ K++DFG A+ G T + GT Y++PE + +
Sbjct: 161 DLIYRDLKPENLMIDQQGYIKVTDFGFAKRVKGR-----TWXLCGTPEYLAPEIILSKGY 215
Query: 249 SIKSDVFSFGVLLLEIVSG 267
+ D ++ GVL+ E+ +G
Sbjct: 216 NKAVDWWALGVLIYEMAAG 234
>pdb|1S9J|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3DY7|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3E8N|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) Complexed With A Potent Inhibitor
Rdea119 And Mgatp
pdb|3V01|A Chain A, Discovery Of Novel Allosteric Mek Inhibitors Possessing
Classical And Non-Classical Bidentate Ser212
Interactions.
pdb|3V04|A Chain A, Discovery Of Novel Allosteric Mek Inhibitors Possessing
Classical And Non-Classical Bidentate Ser212
Interactions
Length = 341
Score = 48.5 bits (114), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 50/203 (24%), Positives = 85/203 (41%), Gaps = 31/203 (15%)
Query: 89 NKFSDANKLGEGGFGPVYKGVLKKGDEIAVKRL------PGRSGQGLREMKNEASVIAKV 142
+ F ++LG G G V+K K + ++L P Q +RE++ V+ +
Sbjct: 6 DDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQ----VLHEC 61
Query: 143 QHKNLVRLLGCCIDKDEKILIYEYMPNKSLDFFLFDPTK-----------------RMLL 185
+V G E + E+M SLD L + L
Sbjct: 62 NSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQILGKVSIAVIKGLTYLR 121
Query: 186 DWSANYSSRLKVSNILLDKDINPKISDFGMARICGGNELQANTSRIVGTYGYMSPEYAIQ 245
+ +K SNIL++ K+ DFG++ G + + + VGT YMSPE
Sbjct: 122 EKHKIMHRDVKPSNILVNSRGEIKLCDFGVS----GQLIDSMANSFVGTRSYMSPERLQG 177
Query: 246 GIFSIKSDVFSFGVLLLEIVSGK 268
+S++SD++S G+ L+E+ G+
Sbjct: 178 THYSVQSDIWSMGLSLVEMAVGR 200
>pdb|2A27|A Chain A, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|B Chain B, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|C Chain C, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|D Chain D, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|E Chain E, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|F Chain F, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|G Chain G, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|H Chain H, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
Length = 321
Score = 48.5 bits (114), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 55/203 (27%), Positives = 92/203 (45%), Gaps = 34/203 (16%)
Query: 94 ANKLGEGGFGPVYKGVLKK-GDEIAVKRLPGRSGQGLR------EMKNEASVIAKVQHKN 146
+LG G F V K K G E A K + R + R E++ E S++ +V H N
Sbjct: 17 GEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSILRQVLHHN 76
Query: 147 LVRLLGCCIDKDEKILIYEYMPNKSLDFFLFDPTK----------RMLLDWSANYSSRLK 196
++ L ++ + +LI E + L FL + +LD NY K
Sbjct: 77 VITLHDVYENRTDVVLILELVSGGELFDFLAQKESLSEEEATSFIKQILD-GVNYLHTKK 135
Query: 197 VSN--------ILLDKDI---NPKISDFGMAR-ICGGNELQANTSRIVGTYGYMSPEYAI 244
+++ +LLDK+I + K+ DFG+A I G E + I GT +++PE
Sbjct: 136 IAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGVEFK----NIFGTPEFVAPEIVN 191
Query: 245 QGIFSIKSDVFSFGVLLLEIVSG 267
+++D++S GV+ ++SG
Sbjct: 192 YEPLGLEADMWSIGVITYILLSG 214
>pdb|1WMK|A Chain A, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|E Chain E, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|C Chain C, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|B Chain B, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|F Chain F, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|D Chain D, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|H Chain H, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|G Chain G, Human Death-Associated Kinase Drp-1, Mutant S308d D40
Length = 321
Score = 48.5 bits (114), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 55/203 (27%), Positives = 92/203 (45%), Gaps = 34/203 (16%)
Query: 94 ANKLGEGGFGPVYKGVLKK-GDEIAVKRLPGRSGQGLR------EMKNEASVIAKVQHKN 146
+LG G F V K K G E A K + R + R E++ E S++ +V H N
Sbjct: 17 GEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSILRQVLHHN 76
Query: 147 LVRLLGCCIDKDEKILIYEYMPNKSLDFFLFDPTK----------RMLLDWSANYSSRLK 196
++ L ++ + +LI E + L FL + +LD NY K
Sbjct: 77 VITLHDVYENRTDVVLILELVSGGELFDFLAQKESLSEEEATSFIKQILD-GVNYLHTKK 135
Query: 197 VSN--------ILLDKDI---NPKISDFGMAR-ICGGNELQANTSRIVGTYGYMSPEYAI 244
+++ +LLDK+I + K+ DFG+A I G E + I GT +++PE
Sbjct: 136 IAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGVEFK----NIFGTPEFVAPEIVN 191
Query: 245 QGIFSIKSDVFSFGVLLLEIVSG 267
+++D++S GV+ ++SG
Sbjct: 192 YEPLGLEADMWSIGVITYILLSG 214
>pdb|2JC6|A Chain A, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase 1d
pdb|2JC6|C Chain C, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase 1d
Length = 334
Score = 48.5 bits (114), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 53/193 (27%), Positives = 88/193 (45%), Gaps = 26/193 (13%)
Query: 97 LGEGGFGPVYKGVLKK-GDEIAVKRLPGRSGQGLRE-MKNEASVIAKVQHKNLVRLLGCC 154
LG G F V K G AVK +P ++ +G ++NE +V+ K++H+N+V L
Sbjct: 30 LGTGAFSEVVLAEEKATGKLFAVKCIPKKALKGKESSIENEIAVLRKIKHENIVALEDIY 89
Query: 155 IDKDEKILIYEYMPNKSL-------DFFLFDPTK---RMLLDWSANYSSR-------LKV 197
+ L+ + + L F+ R +LD + Y R LK
Sbjct: 90 ESPNHLYLVMQLVSGGELFDRIVEKGFYTEKDASTLIRQVLD-AVYYLHRMGIVHRDLKP 148
Query: 198 SNILL---DKDINPKISDFGMARICGGNELQANTSRIVGTYGYMSPEYAIQGIFSIKSDV 254
N+L D++ ISDFG++++ G ++ S GT GY++PE Q +S D
Sbjct: 149 ENLLYYSQDEESKIMISDFGLSKMEGKGDV---MSTACGTPGYVAPEVLAQKPYSKAVDC 205
Query: 255 FSFGVLLLEIVSG 267
+S GV+ ++ G
Sbjct: 206 WSIGVIAYILLCG 218
>pdb|3IGO|A Chain A, Crystal Structure Of Cryptosporidium Parvum Cdpk1,
Cgd3_920
pdb|3MWU|A Chain A, Activated Calcium-Dependent Protein Kinase 1 From
Cryptosporidium Parvum (Cpcdpk1) In Complex With Bumped
Kinase Inhibitor Rm-1-95
pdb|3NCG|A Chain A, Activated Calcium-Dependent Protein Kinase 1 From
Cryptosporidium Parvum (Cpcdpk1) In Complex With Bumped
Kinase Inhibitor Nm-Pp1
Length = 486
Score = 48.5 bits (114), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 79/280 (28%), Positives = 126/280 (45%), Gaps = 50/280 (17%)
Query: 97 LGEGGFGPVYKGVLK-KGDEIAVKRLPGRSGQG--LREMKNEASVIAKVQHKNLVRLLGC 153
LG+G FG V K + E AVK + S + + E ++ K+ H N+++L
Sbjct: 30 LGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKLDHPNIMKLFEI 89
Query: 154 CIDKDEKILIYE-YMPNKSLD-------FFLFDPTKRMLLDWSA-------NYSSR-LKV 197
D ++ E Y + D F D + + +S N R LK
Sbjct: 90 LEDSSSFYIVGELYTGGELFDEIIKRKRFSEHDAARIIKQVFSGITYMHKHNIVHRDLKP 149
Query: 198 SNILLD---KDINPKISDFGMARICGGNELQANTSRI--VGTYGYMSPEYAIQGIFSIKS 252
NILL+ KD + KI DFG++ C Q NT +GT Y++PE ++G + K
Sbjct: 150 ENILLESKEKDCDIKIIDFGLS-TC----FQQNTKMKDRIGTAYYIAPE-VLRGTYDEKC 203
Query: 253 DVFSFGVLLLEIVSGKKTTGFYRTDSLTLL------GYAWDL--W--TSNRTLELIDPIL 302
DV+S GV+L ++SG T FY + +L YA+DL W S+ +LI +L
Sbjct: 204 DVWSAGVILYILLSG--TPPFYGKNEYDILKRVETGKYAFDLPQWRTISDDAKDLIRKML 261
Query: 303 EDEYSSKHMLLRYVNIALL---CVQESADDRPTMNEVVSM 339
+ H LR L +Q+ + + PT++++ S+
Sbjct: 262 -----TFHPSLRITATQCLEHPWIQKYSSETPTISDLPSL 296
>pdb|3ORN|A Chain A, Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In
Complex With Ch4987655 And Mgamp-Pnp
pdb|3OS3|A Chain A, Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In
Complex With Ch4858061 And Mgatp
Length = 307
Score = 48.5 bits (114), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 50/203 (24%), Positives = 85/203 (41%), Gaps = 31/203 (15%)
Query: 89 NKFSDANKLGEGGFGPVYKGVLKKGDEIAVKRL------PGRSGQGLREMKNEASVIAKV 142
+ F ++LG G G V+K K + ++L P Q +RE++ V+ +
Sbjct: 6 DDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQ----VLHEC 61
Query: 143 QHKNLVRLLGCCIDKDEKILIYEYMPNKSLDFFLFDPTK-----------------RMLL 185
+V G E + E+M SLD L + L
Sbjct: 62 NSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQILGKVSIAVIKGLTYLR 121
Query: 186 DWSANYSSRLKVSNILLDKDINPKISDFGMARICGGNELQANTSRIVGTYGYMSPEYAIQ 245
+ +K SNIL++ K+ DFG++ G + + + VGT YMSPE
Sbjct: 122 EKHKIMHRDVKPSNILVNSRGEIKLCDFGVS----GQLIDSMANSFVGTRSYMSPERLQG 177
Query: 246 GIFSIKSDVFSFGVLLLEIVSGK 268
+S++SD++S G+ L+E+ G+
Sbjct: 178 THYSVQSDIWSMGLSLVEMAVGR 200
>pdb|1CTP|E Chain E, Structure Of The Mammalian Catalytic Subunit Of
Camp-Dependent Protein Kinase And An Inhibitor Peptide
Displays An Open Conformation
Length = 350
Score = 48.5 bits (114), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 50/199 (25%), Positives = 90/199 (45%), Gaps = 25/199 (12%)
Query: 89 NKFSDANKLGEGGFGPVYKGVLKK-GDEIAVKRLPGRSGQGLREMK---NEASVIAKVQH 144
++F LG G FG V K+ G+ A+K L + L++++ NE ++ V
Sbjct: 41 DQFERIKTLGTGSFGRVMLVKHKETGNHFAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 100
Query: 145 KNLVRLLGCCIDKDEKILIYEYMPNKSLDFFL------FDPTKR-----MLLDWSANYS- 192
LV+L D ++ EY+P + L +P R ++L + +S
Sbjct: 101 PFLVKLEYSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSL 160
Query: 193 ----SRLKVSNILLDKDINPKISDFGMARICGGNELQANTSRIVGTYGYMSPEYAIQGIF 248
LK N+L+D+ +++DFG A+ G T + GT Y++PE + +
Sbjct: 161 DLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGR-----TWXLCGTPEYLAPEIILSKGY 215
Query: 249 SIKSDVFSFGVLLLEIVSG 267
+ D ++ GVL+ E+ +G
Sbjct: 216 NKAVDWWALGVLIYEMAAG 234
>pdb|2P55|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3EQB|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
Length = 333
Score = 48.5 bits (114), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 50/203 (24%), Positives = 85/203 (41%), Gaps = 31/203 (15%)
Query: 89 NKFSDANKLGEGGFGPVYKGVLKKGDEIAVKRL------PGRSGQGLREMKNEASVIAKV 142
+ F ++LG G G V+K K + ++L P Q +RE++ V+ +
Sbjct: 6 DDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQ----VLHEC 61
Query: 143 QHKNLVRLLGCCIDKDEKILIYEYMPNKSLDFFLFDPTK-----------------RMLL 185
+V G E + E+M SLD L + L
Sbjct: 62 NSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQILGKVSIAVIKGLTYLR 121
Query: 186 DWSANYSSRLKVSNILLDKDINPKISDFGMARICGGNELQANTSRIVGTYGYMSPEYAIQ 245
+ +K SNIL++ K+ DFG++ G + + + VGT YMSPE
Sbjct: 122 EKHKIMHRDVKPSNILVNSRGEIKLCDFGVS----GQLIDSMANSFVGTRSYMSPERLQG 177
Query: 246 GIFSIKSDVFSFGVLLLEIVSGK 268
+S++SD++S G+ L+E+ G+
Sbjct: 178 THYSVQSDIWSMGLSLVEMAVGR 200
>pdb|1CDK|A Chain A, Camp-Dependent Protein Kinase Catalytic Subunit
(E.C.2.7.1.37) (Protein Kinase A) Complexed With Protein
Kinase Inhibitor Peptide Fragment 5-24 (Pki(5-24)
Isoelectric Variant Ca) And Mn2+ Adenylyl
Imidodiphosphate (Mnamp-Pnp) At Ph 5.6 And 7c And 4c
pdb|1CDK|B Chain B, Camp-Dependent Protein Kinase Catalytic Subunit
(E.C.2.7.1.37) (Protein Kinase A) Complexed With Protein
Kinase Inhibitor Peptide Fragment 5-24 (Pki(5-24)
Isoelectric Variant Ca) And Mn2+ Adenylyl
Imidodiphosphate (Mnamp-Pnp) At Ph 5.6 And 7c And 4c
Length = 350
Score = 48.1 bits (113), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 50/199 (25%), Positives = 90/199 (45%), Gaps = 25/199 (12%)
Query: 89 NKFSDANKLGEGGFGPVYKGVLKK-GDEIAVKRLPGRSGQGLREMK---NEASVIAKVQH 144
++F LG G FG V K+ G+ A+K L + L++++ NE ++ V
Sbjct: 41 DQFERIKTLGTGSFGRVMLVKHKETGNHFAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 100
Query: 145 KNLVRLLGCCIDKDEKILIYEYMPNKSLDFFL------FDPTKR-----MLLDWSANYS- 192
LV+L D ++ EY+P + L +P R ++L + +S
Sbjct: 101 PFLVKLEYSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSL 160
Query: 193 ----SRLKVSNILLDKDINPKISDFGMARICGGNELQANTSRIVGTYGYMSPEYAIQGIF 248
LK N+L+D+ +++DFG A+ G T + GT Y++PE + +
Sbjct: 161 DLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGR-----TWXLCGTPEYLAPEIILSKGY 215
Query: 249 SIKSDVFSFGVLLLEIVSG 267
+ D ++ GVL+ E+ +G
Sbjct: 216 NKAVDWWALGVLIYEMAAG 234
>pdb|2I6L|A Chain A, Crystal Structure Of Human Mitogen Activated Protein
Kinase 6 (Mapk6)
pdb|2I6L|B Chain B, Crystal Structure Of Human Mitogen Activated Protein
Kinase 6 (Mapk6)
Length = 320
Score = 48.1 bits (113), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 57/249 (22%), Positives = 109/249 (43%), Gaps = 44/249 (17%)
Query: 89 NKFSDANKLGEGGFGPVYKGVLKKGDE-IAVKRLPGRSGQGLREMKNEASVIAKVQHKNL 147
+++ D LG GG G V+ V D+ +A+K++ Q ++ E +I ++ H N+
Sbjct: 11 SRYMDLKPLGCGGNGLVFSAVDNDCDKRVAIKKIVLTDPQSVKHALREIKIIRRLDHDNI 70
Query: 148 VRL--------------LGCCIDKDEKILIYEYMPN-------------KSLDFFLFDPT 180
V++ +G + + ++ EYM + F++
Sbjct: 71 VKVFEILGPSGSQLTDDVGSLTELNSVYIVQEYMETDLANVLEQGPLLEEHARLFMYQLL 130
Query: 181 KRMLLDWSANYSSR-LKVSNILLD-KDINPKISDFGMARICGGN-ELQANTSRIVGTYGY 237
+ + SAN R LK +N+ ++ +D+ KI DFG+ARI + + + S + T Y
Sbjct: 131 RGLKYIHSANVLHRDLKPANLFINTEDLVLKIGDFGLARIMDPHYSHKGHLSEGLVTKWY 190
Query: 238 MSPEYAIQ-GIFSIKSDVFSFGVLLLEIVSGKKTTGFYRTDSLTLLGYAWDLWTSNRTLE 296
SP + ++ D+++ G + E+++GK TL A +L LE
Sbjct: 191 RSPRLLLSPNNYTKAIDMWAAGCIFAEMLTGK-----------TLFAGAHELEQMQLILE 239
Query: 297 LIDPILEDE 305
I P++ +E
Sbjct: 240 SI-PVVHEE 247
>pdb|2QG5|A Chain A, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
pdb|2QG5|B Chain B, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
pdb|2QG5|D Chain D, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
Length = 294
Score = 48.1 bits (113), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 52/211 (24%), Positives = 93/211 (44%), Gaps = 28/211 (13%)
Query: 79 FSFSSVSTATNKFSDANKLGEGGFGPVYKGVLKKGDEI--AVKRLPGRSGQGLREMKNEA 136
F S+ ++ N +G G +G V K ++KG I A K++P + + K E
Sbjct: 16 FQGSTKGDINQYYTLENTIGRGSWGEV-KIAVQKGTRIRRAAKKIPKYFVEDVDRFKQEI 74
Query: 137 SVIAKVQHKNLVRLLGCCIDKDEKILIYEYMPNKSL-------DFFLFDPTKRMLLDW-- 187
++ + H N++RL D + L+ E L F R++ D
Sbjct: 75 EIMKSLDHPNIIRLYETFEDNTDIYLVMELCTGGELFERVVHKRVFRESDAARIMKDVLS 134
Query: 188 SANYSSRLKVSN---------ILLDKDINP-KISDFGM-ARICGGNELQANTSRIVGTYG 236
+ Y +L V++ L D +P K+ DFG+ AR G ++ VGT
Sbjct: 135 AVAYCHKLNVAHRDLKPENFLFLTDSPDSPLKLIDFGLAARFKPGKMMRTK----VGTPY 190
Query: 237 YMSPEYAIQGIFSIKSDVFSFGVLLLEIVSG 267
Y+SP+ ++G++ + D +S GV++ ++ G
Sbjct: 191 YVSPQ-VLEGLYGPECDEWSAGVMMYVLLCG 220
>pdb|2GNJ|A Chain A, Pka Three Fold Mutant Model Of Rho-Kinase With Y-27632
pdb|2GNL|A Chain A, Pka Threefold Mutant Model Of Rho-Kinase With Inhibitor H-
1152p
Length = 350
Score = 48.1 bits (113), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 49/199 (24%), Positives = 90/199 (45%), Gaps = 25/199 (12%)
Query: 89 NKFSDANKLGEGGFGPVY-KGVLKKGDEIAVKRLPGRSGQGLREMK---NEASVIAKVQH 144
++F +G G FG V ++ G+ A+K L + L++++ NE ++ V
Sbjct: 41 DQFERIKTIGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 100
Query: 145 KNLVRLLGCCIDKDEKILIYEYMPNKSLDFFL------FDPTKR-----MLLDWSANYS- 192
LV+L D ++ EY+P + L +P R ++L + +S
Sbjct: 101 PFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSL 160
Query: 193 ----SRLKVSNILLDKDINPKISDFGMARICGGNELQANTSRIVGTYGYMSPEYAIQGIF 248
LK N+L+D+ K++DFG A+ G T + GT Y++PE + +
Sbjct: 161 DLIYRDLKPENLLIDQQGYIKVADFGFAKRVKGR-----TWXLCGTPEYLAPEIILSKGY 215
Query: 249 SIKSDVFSFGVLLLEIVSG 267
+ D ++ GVL+ E+ +G
Sbjct: 216 NKAVDWWALGVLIYEMAAG 234
>pdb|3E7O|A Chain A, Crystal Structure Of Jnk2
pdb|3E7O|B Chain B, Crystal Structure Of Jnk2
Length = 360
Score = 48.1 bits (113), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 56/221 (25%), Positives = 95/221 (42%), Gaps = 31/221 (14%)
Query: 83 SVSTATNKFSDANKLGEGGFGPV---YKGVLKKGDEIAVKRL--PGRSGQGLREMKNEAS 137
S T ++ +G G G V + VL G +AVK+L P ++ + E
Sbjct: 16 STFTVLKRYQQLKPIGSGAQGIVCAAFDTVL--GINVAVKKLSRPFQNQTHAKRAYRELV 73
Query: 138 VIAKVQHKNLVRLLGC------------------CIDKDEKILIYEYMPNKSLDFFLFDP 179
++ V HKN++ LL +D + +I+ + ++ + + L+
Sbjct: 74 LLKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIHMELDHERMSYLLYQM 133
Query: 180 TKRMLLDWSANYSSR-LKVSNILLDKDINPKISDFGMARICGGNELQANTSRIVGTYGYM 238
+ SA R LK SNI++ D KI DFG+AR N + T +V Y Y
Sbjct: 134 LCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTASTNFMM--TPYVVTRY-YR 190
Query: 239 SPEYAIQGIFSIKSDVFSFGVLLLEIVSGKKTTGFYRTDSL 279
+PE + + D++S G ++ E+V G + F TD +
Sbjct: 191 APEVILGMGYKENVDIWSVGCIMGELVKG--SVIFQGTDHI 229
>pdb|1CMK|E Chain E, Crystal Structures Of The Myristylated Catalytic Subunit
Of Camp- Dependent Protein Kinase Reveal Open And Closed
Conformations
Length = 350
Score = 48.1 bits (113), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 50/199 (25%), Positives = 90/199 (45%), Gaps = 25/199 (12%)
Query: 89 NKFSDANKLGEGGFGPVYKGVLKK-GDEIAVKRLPGRSGQGLREMK---NEASVIAKVQH 144
++F LG G FG V K+ G+ A+K L + L++++ NE ++ V
Sbjct: 41 DQFERIKTLGTGSFGRVMLVKHKETGNHFAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 100
Query: 145 KNLVRLLGCCIDKDEKILIYEYMPNKSLDFFL------FDPTKR-----MLLDWSANYS- 192
LV+L D ++ EY+P + L +P R ++L + +S
Sbjct: 101 PFLVKLEYSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSL 160
Query: 193 ----SRLKVSNILLDKDINPKISDFGMARICGGNELQANTSRIVGTYGYMSPEYAIQGIF 248
LK N+L+D+ +++DFG A+ G T + GT Y++PE + +
Sbjct: 161 DLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGR-----TWXLCGTPEYLAPEIILSKGY 215
Query: 249 SIKSDVFSFGVLLLEIVSG 267
+ D ++ GVL+ E+ +G
Sbjct: 216 NKAVDWWALGVLIYEMAAG 234
>pdb|1LEW|A Chain A, Crystal Structure Of Map Kinase P38 Complexed To The
Docking Site On Its Nuclear Substrate Mef2a
pdb|1LEZ|A Chain A, Crystal Structure Of Map Kinase P38 Complexed To The
Docking Site On Its Activator Mkk3b
Length = 360
Score = 48.1 bits (113), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 49/224 (21%), Positives = 101/224 (45%), Gaps = 31/224 (13%)
Query: 83 SVSTATNKFSDANKLGEGGFGPVYKGV-LKKGDEIAVKRL--PGRSGQGLREMKNEASVI 139
++ ++ + + +G G +G V K G +AVK+L P +S + E ++
Sbjct: 16 TIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLL 75
Query: 140 AKVQHKNLVRLLGC-----CIDKDEKILIYEYMPNKSLD--------------FFLFDPT 180
++H+N++ LL +++ + + ++ L+ F ++
Sbjct: 76 KHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQIL 135
Query: 181 KRMLLDWSANYSSR-LKVSNILLDKDINPKISDFGMARICGGNELQANTSRIVGTYGYMS 239
+ + SA+ R LK SN+ +++D KI DFG+AR + V T Y +
Sbjct: 136 RGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLAR-----HTDDEMTGYVATRWYRA 190
Query: 240 PEYAIQGI-FSIKSDVFSFGVLLLEIVSGKKTTGFYRTDSLTLL 282
PE + + ++ D++S G ++ E+++G+ T F TD + L
Sbjct: 191 PEIMLNWMHYNQTVDIWSVGCIMAELLTGR--TLFPGTDHIDQL 232
>pdb|2GTM|A Chain A, Mutated Mouse P38 Map Kinase Domain In Complex With
Inhibitor Pg-892579
pdb|2GTN|A Chain A, Mutated Map Kinase P38 (mus Musculus) In Complex With
Inhbitor Pg-951717
Length = 348
Score = 48.1 bits (113), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 49/224 (21%), Positives = 101/224 (45%), Gaps = 31/224 (13%)
Query: 83 SVSTATNKFSDANKLGEGGFGPVYKGV-LKKGDEIAVKRL--PGRSGQGLREMKNEASVI 139
++ ++ + + +G G +G V K G +AVK+L P +S + E ++
Sbjct: 12 TIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLL 71
Query: 140 AKVQHKNLVRLLGC-----CIDKDEKILIYEYMPNKSLD--------------FFLFDPT 180
++H+N++ LL +++ + + ++ L+ F ++
Sbjct: 72 KHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQIL 131
Query: 181 KRMLLDWSANYSSR-LKVSNILLDKDINPKISDFGMARICGGNELQANTSRIVGTYGYMS 239
+ + SA+ R LK SN+ +++D KI DFG+AR + V T Y +
Sbjct: 132 RGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLAR-----HTDDEMTGYVATRWYRA 186
Query: 240 PEYAIQGI-FSIKSDVFSFGVLLLEIVSGKKTTGFYRTDSLTLL 282
PE + + ++ D++S G ++ E+++G+ T F TD + L
Sbjct: 187 PEIMLNWMHYNQTVDIWSVGCIMAELLTGR--TLFPGTDHIDQL 228
>pdb|3V3V|A Chain A, Structural And Functional Analysis Of Quercetagetin, A
Natural Jnk1 Inhibitor
Length = 379
Score = 48.1 bits (113), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 50/209 (23%), Positives = 92/209 (44%), Gaps = 29/209 (13%)
Query: 83 SVSTATNKFSDANKLGEGGFGPV---YKGVLKKGDEIAVKRL--PGRSGQGLREMKNEAS 137
S T ++ + +G G G V Y +L++ +A+K+L P ++ + E
Sbjct: 18 STFTVLKRYQNLKPIGSGAQGIVCAAYDAILERN--VAIKKLSRPFQNQTHAKRAYRELV 75
Query: 138 VIAKVQHKNLVRLLGC------------------CIDKDEKILIYEYMPNKSLDFFLFDP 179
++ V HKN++ LL +D + +I + ++ + + L+
Sbjct: 76 LMKCVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLCQVIQMELDHERMSYLLYQM 135
Query: 180 TKRMLLDWSANYSSR-LKVSNILLDKDINPKISDFGMARICGGNELQANTSRIVGTYGYM 238
+ SA R LK SNI++ D KI DFG+AR G + + T +V Y Y
Sbjct: 136 LCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMM--TPEVVTRY-YR 192
Query: 239 SPEYAIQGIFSIKSDVFSFGVLLLEIVSG 267
+PE + + D++S G ++ E++ G
Sbjct: 193 APEVILGMGYKENVDIWSVGCIMGEMIKG 221
>pdb|3VUI|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M2 In Map
Kinase Jnk1
Length = 370
Score = 48.1 bits (113), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 50/209 (23%), Positives = 92/209 (44%), Gaps = 29/209 (13%)
Query: 83 SVSTATNKFSDANKLGEGGFGPV---YKGVLKKGDEIAVKRL--PGRSGQGLREMKNEAS 137
S T ++ + +G G G V Y +L++ +A+K+L P ++ + E
Sbjct: 18 STFTVLKRYQNLKPIGSGAQGIVCAAYDAILERN--VAIKKLSRPFQNQTHAKRAYRELV 75
Query: 138 VIAKVQHKNLVRLLGC------------------CIDKDEKILIYEYMPNKSLDFFLFDP 179
++ V HKN++ LL +D + +I + ++ + + L+
Sbjct: 76 LMKVVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLSQVIQMELDHERMSYLLYQM 135
Query: 180 TKRMLLDWSANYSSR-LKVSNILLDKDINPKISDFGMARICGGNELQANTSRIVGTYGYM 238
+ SA R LK SNI++ D KI DFG+AR G + + T +V Y Y
Sbjct: 136 LCGIKHLHSAGIIHRDLKPSNIVVKSDATLKILDFGLARTAGTSFMM--TPYVVTRY-YR 192
Query: 239 SPEYAIQGIFSIKSDVFSFGVLLLEIVSG 267
+PE + + D++S G ++ E++ G
Sbjct: 193 APEVILGMGYKENVDIWSVGCIMGEMIKG 221
>pdb|1UA2|A Chain A, Crystal Structure Of Human Cdk7
pdb|1UA2|B Chain B, Crystal Structure Of Human Cdk7
pdb|1UA2|C Chain C, Crystal Structure Of Human Cdk7
pdb|1UA2|D Chain D, Crystal Structure Of Human Cdk7
Length = 346
Score = 48.1 bits (113), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 50/209 (23%), Positives = 94/209 (44%), Gaps = 33/209 (15%)
Query: 84 VSTATNKFSDANKLGEGGFGPVYKGVLKKGDEI-AVKRLP---------GRSGQGLREMK 133
V + ++ + LGEG F VYK K ++I A+K++ G + LRE+K
Sbjct: 5 VKSRAKRYEKLDFLGEGQFATVYKARDKNTNQIVAIKKIKLGHRSEAKDGINRTALREIK 64
Query: 134 NEASVIAKVQHKNLVRLLGCCIDKDEKILIYEYM----------------PNKSLDFFLF 177
++ ++ H N++ LL K L++++M P+ + L
Sbjct: 65 ----LLQELSHPNIIGLLDAFGHKSNISLVFDFMETDLEVIIKDNSLVLTPSHIKAYMLM 120
Query: 178 DPTKRMLLDWSANYSSRLKVSNILLDKDINPKISDFGMARICGGNELQANTSRIVGTYGY 237
L LK +N+LLD++ K++DFG+A+ G +A ++V T Y
Sbjct: 121 TLQGLEYLHQHWILHRDLKPNNLLLDENGVLKLADFGLAKSFGSPN-RAYXHQVV-TRWY 178
Query: 238 MSPEYAIQG-IFSIKSDVFSFGVLLLEIV 265
+PE ++ + D+++ G +L E++
Sbjct: 179 RAPELLFGARMYGVGVDMWAVGCILAELL 207
>pdb|4AF3|A Chain A, Human Aurora B Kinase In Complex With Incenp And Vx-680
Length = 292
Score = 48.1 bits (113), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 50/197 (25%), Positives = 82/197 (41%), Gaps = 24/197 (12%)
Query: 91 FSDANKLGEGGFGPVYKGVLKKGDEIAVKRLPGRSG---QGL-REMKNEASVIAKVQHKN 146
F LG+G FG VY KK I ++ +S +G+ +++ E + A + H N
Sbjct: 25 FEIGRPLGKGKFGNVYLAREKKSHFIVALKVLFKSQIEKEGVEHQLRREIEIQAHLHHPN 84
Query: 147 LVRLLGCCIDKDEKILIYEYMPNKSLDFFL-----FDPTKRMLLDWSANYSSRLKVSNIL 201
++RL D+ LI EY P L L FD + + + +
Sbjct: 85 ILRLYNYFYDRRRIYLILEYAPRGELYKELQKSCTFDEQRTATIMEELADALMYCHGKKV 144
Query: 202 LDKDINPK-----------ISDFGMARICGGNELQANTSRIVGTYGYMSPEYAIQGIFSI 250
+ +DI P+ I+DFG + L+ T + GT Y+ PE + +
Sbjct: 145 IHRDIKPENLLLGLKGELKIADFGWS--VHAPSLRRKT--MCGTLDYLPPEMIEGRMHNE 200
Query: 251 KSDVFSFGVLLLEIVSG 267
K D++ GVL E++ G
Sbjct: 201 KVDLWCIGVLCYELLVG 217
>pdb|2PUU|A Chain A, Crystal Structure Of P38 Complex With 1-(5-Tert-Butyl-2-P-
Tolyl-2h-Pyrazol-3-Yl)-3-[4-(6-Morpholin-4-Ylmethyl-
Pyridin-3-Yl)naphthalen-1-Yl]urea
pdb|3CTQ|A Chain A, Structure Of Map Kinase P38 In Complex With A
1-O-Tolyl-1,2, 3-Triazole-4-Carboxamide
Length = 348
Score = 48.1 bits (113), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 49/224 (21%), Positives = 101/224 (45%), Gaps = 31/224 (13%)
Query: 83 SVSTATNKFSDANKLGEGGFGPVYKGV-LKKGDEIAVKRL--PGRSGQGLREMKNEASVI 139
++ ++ + + +G G +G V K G +AVK+L P +S + E ++
Sbjct: 12 TIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLL 71
Query: 140 AKVQHKNLVRLLGC-----CIDKDEKILIYEYMPNKSLD--------------FFLFDPT 180
++H+N++ LL +++ + + ++ L+ F ++
Sbjct: 72 KHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCAKLTDDHVQFLIYQIL 131
Query: 181 KRMLLDWSANYSSR-LKVSNILLDKDINPKISDFGMARICGGNELQANTSRIVGTYGYMS 239
+ + SA+ R LK SN+ +++D KI DFG+AR + V T Y +
Sbjct: 132 RGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLAR-----HTDDEMTGYVATRWYRA 186
Query: 240 PEYAIQGI-FSIKSDVFSFGVLLLEIVSGKKTTGFYRTDSLTLL 282
PE + + ++ D++S G ++ E+++G+ T F TD + L
Sbjct: 187 PEIMLNWMHYNQTVDIWSVGCIMAELLTGR--TLFPGTDHIDQL 228
>pdb|4AE6|A Chain A, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit Calpha 2
pdb|4AE6|B Chain B, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit Calpha 2
Length = 343
Score = 48.1 bits (113), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 50/199 (25%), Positives = 90/199 (45%), Gaps = 25/199 (12%)
Query: 89 NKFSDANKLGEGGFGPVYKGVLKK-GDEIAVKRLPGRSGQGLREMK---NEASVIAKVQH 144
++F LG G FG V K+ G+ A+K L + L++++ NE ++ V
Sbjct: 34 DQFERIKTLGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 93
Query: 145 KNLVRLLGCCIDKDEKILIYEYMPNKSLDFFL------FDPTKR-----MLLDWSANYS- 192
LV+L D ++ EY+P + L +P R ++L + +S
Sbjct: 94 PFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSL 153
Query: 193 ----SRLKVSNILLDKDINPKISDFGMARICGGNELQANTSRIVGTYGYMSPEYAIQGIF 248
LK N+L+D+ +++DFG A+ G T + GT Y++PE + +
Sbjct: 154 DLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGR-----TWXLCGTPEYLAPEIILSKGY 208
Query: 249 SIKSDVFSFGVLLLEIVSG 267
+ D ++ GVL+ E+ +G
Sbjct: 209 NKAVDWWALGVLIYEMAAG 227
>pdb|3MBL|A Chain A, Crystal Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek 1) In Complex With Ligand And Mgadp
pdb|3PP1|A Chain A, Crystal Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek 1) In Complex With Ligand And Mgatp
Length = 328
Score = 48.1 bits (113), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 50/203 (24%), Positives = 85/203 (41%), Gaps = 31/203 (15%)
Query: 89 NKFSDANKLGEGGFGPVYKGVLKKGDEIAVKRL------PGRSGQGLREMKNEASVIAKV 142
+ F ++LG G G V+K K + ++L P Q +RE++ V+ +
Sbjct: 6 DDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQ----VLHEC 61
Query: 143 QHKNLVRLLGCCIDKDEKILIYEYMPNKSLDFFLFDPTK-----------------RMLL 185
+V G E + E+M SLD L + L
Sbjct: 62 NSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQILGKVSIAVIKGLTYLR 121
Query: 186 DWSANYSSRLKVSNILLDKDINPKISDFGMARICGGNELQANTSRIVGTYGYMSPEYAIQ 245
+ +K SNIL++ K+ DFG++ G + + + VGT YMSPE
Sbjct: 122 EKHKIMHRDVKPSNILVNSRGEIKLCDFGVS----GQLIDSMANSFVGTRSYMSPERLQG 177
Query: 246 GIFSIKSDVFSFGVLLLEIVSGK 268
+S++SD++S G+ L+E+ G+
Sbjct: 178 THYSVQSDIWSMGLSLVEMAVGR 200
>pdb|3DV3|A Chain A, Mek1 With Pf-04622664 Bound
Length = 322
Score = 48.1 bits (113), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 50/203 (24%), Positives = 85/203 (41%), Gaps = 31/203 (15%)
Query: 89 NKFSDANKLGEGGFGPVYKGVLKKGDEIAVKRL------PGRSGQGLREMKNEASVIAKV 142
+ F ++LG G G V+K K + ++L P Q +RE++ V+ +
Sbjct: 6 DDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQ----VLHEC 61
Query: 143 QHKNLVRLLGCCIDKDEKILIYEYMPNKSLDFFLFDPTK-----------------RMLL 185
+V G E + E+M SLD L + L
Sbjct: 62 NSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQILGKVSIAVIKGLTYLR 121
Query: 186 DWSANYSSRLKVSNILLDKDINPKISDFGMARICGGNELQANTSRIVGTYGYMSPEYAIQ 245
+ +K SNIL++ K+ DFG++ G + + + VGT YMSPE
Sbjct: 122 EKHKIMHRDVKPSNILVNSRGEIKLCDFGVS----GQLIDSMANSFVGTRSYMSPERLQG 177
Query: 246 GIFSIKSDVFSFGVLLLEIVSGK 268
+S++SD++S G+ L+E+ G+
Sbjct: 178 THYSVQSDIWSMGLSLVEMAVGR 200
>pdb|1ZWS|A Chain A, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|B Chain B, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|C Chain C, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|D Chain D, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|E Chain E, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|F Chain F, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|G Chain G, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|H Chain H, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
Length = 288
Score = 48.1 bits (113), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 55/203 (27%), Positives = 92/203 (45%), Gaps = 34/203 (16%)
Query: 94 ANKLGEGGFGPVYKGVLKK-GDEIAVKRLPGRSGQGLR------EMKNEASVIAKVQHKN 146
+LG G F V K K G E A K + R + R E++ E S++ +V H N
Sbjct: 17 GEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSILRQVLHHN 76
Query: 147 LVRLLGCCIDKDEKILIYEYMPNKSLDFFLFDPTK----------RMLLDWSANYSSRLK 196
++ L ++ + +LI E + L FL + +LD NY K
Sbjct: 77 VITLHDVYENRTDVVLILELVSGGELFDFLAQKESLSEEEATSFIKQILD-GVNYLHTKK 135
Query: 197 VSN--------ILLDKDI---NPKISDFGMAR-ICGGNELQANTSRIVGTYGYMSPEYAI 244
+++ +LLDK+I + K+ DFG+A I G E + I GT +++PE
Sbjct: 136 IAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGVEFK----NIFGTPEFVAPEIVN 191
Query: 245 QGIFSIKSDVFSFGVLLLEIVSG 267
+++D++S GV+ ++SG
Sbjct: 192 YEPLGLEADMWSIGVITYILLSG 214
>pdb|3VUG|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M2 In Map
Kinase Jnk1
Length = 370
Score = 48.1 bits (113), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 50/209 (23%), Positives = 92/209 (44%), Gaps = 29/209 (13%)
Query: 83 SVSTATNKFSDANKLGEGGFGPV---YKGVLKKGDEIAVKRL--PGRSGQGLREMKNEAS 137
S T ++ + +G G G V Y +L++ +A+K+L P ++ + E
Sbjct: 18 STFTVLKRYQNLKPIGSGAQGIVCAAYDAILERN--VAIKKLSRPFQNQTHAKRAYRELV 75
Query: 138 VIAKVQHKNLVRLLGC------------------CIDKDEKILIYEYMPNKSLDFFLFDP 179
++ V HKN++ LL +D + +I + ++ + + L+
Sbjct: 76 LMKCVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLSQVIQMELDHERMSYLLYQM 135
Query: 180 TKRMLLDWSANYSSR-LKVSNILLDKDINPKISDFGMARICGGNELQANTSRIVGTYGYM 238
+ SA R LK SNI++ D KI DFG+AR G + + T +V Y Y
Sbjct: 136 LCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMM--TPYVVTRY-YR 192
Query: 239 SPEYAIQGIFSIKSDVFSFGVLLLEIVSG 267
+PE + + D++S G ++ E++ G
Sbjct: 193 APEVILGMGYKENVDIWSVGCIMGEMIKG 221
>pdb|3FI2|A Chain A, Crystal Structure Of Jnk3 With Amino-Pyrazole Inhibitor,
Sr- 3451
Length = 353
Score = 48.1 bits (113), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 53/210 (25%), Positives = 91/210 (43%), Gaps = 29/210 (13%)
Query: 83 SVSTATNKFSDANKLGEGGFGPV---YKGVLKKGDEIAVKRL--PGRSGQGLREMKNEAS 137
S T ++ + +G G G V Y VL + +A+K+L P ++ + E
Sbjct: 18 STFTVLKRYQNLKPIGSGAQGIVCAAYDAVLDRN--VAIKKLSRPFQNQTHAKRAYRELV 75
Query: 138 VIAKVQHKNLVRLLGCCIDK------DEKILIYEYMP------------NKSLDFFLFDP 179
++ V HKN++ LL + + L+ E M ++ + + L+
Sbjct: 76 LMKXVNHKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIQMELDHERMSYLLYQM 135
Query: 180 TKRMLLDWSANYSSR-LKVSNILLDKDINPKISDFGMARICGGNELQANTSRIVGTYGYM 238
+ SA R LK SNI++ D KI DFG+AR G + + T +V Y Y
Sbjct: 136 LCGIKHLHSAGIIHRDLKPSNIVVKSDXTLKILDFGLARTAGTSFMM--TPYVVTRY-YR 192
Query: 239 SPEYAIQGIFSIKSDVFSFGVLLLEIVSGK 268
+PE + + D++S G ++ E+V K
Sbjct: 193 APEVILGMGYKENVDIWSVGCIMGEMVRHK 222
>pdb|1STC|E Chain E, Camp-Dependent Protein Kinase, Alpha-Catalytic Subunit In
Complex With Staurosporine
pdb|1Q8T|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase
(Pka) In Complex With Rho-Kinase Inhibitor Y-27632
pdb|1Q8U|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase In
Complex With Rho-Kinase Inhibitor H-1152p
pdb|1SVE|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 1
pdb|1SVG|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 4
pdb|1VEB|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 5
pdb|3E8C|A Chain A, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|B Chain B, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|C Chain C, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|D Chain D, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|E Chain E, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|F Chain F, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8E|A Chain A, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|B Chain B, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|E Chain E, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|I Chain I, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|L Chain L, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|P Chain P, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
Length = 350
Score = 48.1 bits (113), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 49/199 (24%), Positives = 90/199 (45%), Gaps = 25/199 (12%)
Query: 89 NKFSDANKLGEGGFGPVY-KGVLKKGDEIAVKRLPGRSGQGLREMK---NEASVIAKVQH 144
++F LG G FG V ++ G+ A+K L + L++++ NE ++ V
Sbjct: 41 DQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 100
Query: 145 KNLVRLLGCCIDKDEKILIYEYMPNKSLDFFL------FDPTKR-----MLLDWSANYS- 192
LV+L D ++ EY+P + L +P R ++L + +S
Sbjct: 101 PFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSL 160
Query: 193 ----SRLKVSNILLDKDINPKISDFGMARICGGNELQANTSRIVGTYGYMSPEYAIQGIF 248
LK N+L+D+ +++DFG A+ G T + GT Y++PE + +
Sbjct: 161 DLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGR-----TWXLCGTPEYLAPEIILSKGY 215
Query: 249 SIKSDVFSFGVLLLEIVSG 267
+ D ++ GVL+ E+ +G
Sbjct: 216 NKAVDWWALGVLIYEMAAG 234
>pdb|3VUH|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M3 In Map
Kinase Jnk1
Length = 370
Score = 48.1 bits (113), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 50/209 (23%), Positives = 92/209 (44%), Gaps = 29/209 (13%)
Query: 83 SVSTATNKFSDANKLGEGGFGPV---YKGVLKKGDEIAVKRL--PGRSGQGLREMKNEAS 137
S T ++ + +G G G V Y +L++ +A+K+L P ++ + E
Sbjct: 18 STFTVLKRYQNLKPIGSGAQGIVCAAYDAILERN--VAIKKLSRPFQNQTHAKRAYRELV 75
Query: 138 VIAKVQHKNLVRLLGC------------------CIDKDEKILIYEYMPNKSLDFFLFDP 179
++ V HKN++ LL +D + +I + ++ + + L+
Sbjct: 76 LMKCVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLSQVIQMELDHERMSYLLYQM 135
Query: 180 TKRMLLDWSANYSSR-LKVSNILLDKDINPKISDFGMARICGGNELQANTSRIVGTYGYM 238
+ SA R LK SNI++ D KI DFG+AR G + + T +V Y Y
Sbjct: 136 LCGIKHLHSAGIIHRDLKPSNIVVKSDATLKILDFGLARTAGTSFMM--TPYVVTRY-YR 192
Query: 239 SPEYAIQGIFSIKSDVFSFGVLLLEIVSG 267
+PE + + D++S G ++ E++ G
Sbjct: 193 APEVILGMGYKENVDIWSVGCIMGEMIKG 221
>pdb|3TG1|A Chain A, Crystal Structure Of P38alpha In Complex With A Mapk
Docking Partner
Length = 380
Score = 48.1 bits (113), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 49/224 (21%), Positives = 101/224 (45%), Gaps = 31/224 (13%)
Query: 83 SVSTATNKFSDANKLGEGGFGPVYKGV-LKKGDEIAVKRL--PGRSGQGLREMKNEASVI 139
++ ++ + + +G G +G V K G +AVK+L P +S + E ++
Sbjct: 36 TIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLL 95
Query: 140 AKVQHKNLVRLLGC-----CIDKDEKILIYEYMPNKSLD--------------FFLFDPT 180
++H+N++ LL +++ + + ++ L+ F ++
Sbjct: 96 KHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQIL 155
Query: 181 KRMLLDWSANYSSR-LKVSNILLDKDINPKISDFGMARICGGNELQANTSRIVGTYGYMS 239
+ + SA+ R LK SN+ +++D KI DFG+AR + V T Y +
Sbjct: 156 RGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLAR-----HTDDEMTGYVATRWYRA 210
Query: 240 PEYAIQGI-FSIKSDVFSFGVLLLEIVSGKKTTGFYRTDSLTLL 282
PE + + ++ D++S G ++ E+++G+ T F TD + L
Sbjct: 211 PEIMLNWMHYNQTVDIWSVGCIMAELLTGR--TLFPGTDHIDQL 252
>pdb|2OZA|B Chain B, Structure Of P38alpha Complex
pdb|3P78|A Chain A, P38 Inhibitor-Bound
pdb|3P79|A Chain A, P38 Inhibitor-Bound
pdb|3P7A|A Chain A, P38 Inhibitor-Bound
pdb|3P7B|A Chain A, P38 Inhibitor-Bound
pdb|3P7C|A Chain A, P38 Inhibitor-Bound
pdb|3P5K|A Chain A, P38 Inhibitor-Bound
Length = 366
Score = 48.1 bits (113), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 49/224 (21%), Positives = 101/224 (45%), Gaps = 31/224 (13%)
Query: 83 SVSTATNKFSDANKLGEGGFGPVYKGV-LKKGDEIAVKRL--PGRSGQGLREMKNEASVI 139
++ ++ + + +G G +G V K G +AVK+L P +S + E ++
Sbjct: 22 TIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLL 81
Query: 140 AKVQHKNLVRLLGC-----CIDKDEKILIYEYMPNKSLD--------------FFLFDPT 180
++H+N++ LL +++ + + ++ L+ F ++
Sbjct: 82 KHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQIL 141
Query: 181 KRMLLDWSANYSSR-LKVSNILLDKDINPKISDFGMARICGGNELQANTSRIVGTYGYMS 239
+ + SA+ R LK SN+ +++D KI DFG+AR + V T Y +
Sbjct: 142 RGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLAR-----HTDDEMTGYVATRWYRA 196
Query: 240 PEYAIQGI-FSIKSDVFSFGVLLLEIVSGKKTTGFYRTDSLTLL 282
PE + + ++ D++S G ++ E+++G+ T F TD + L
Sbjct: 197 PEIMLNWMHYNQTVDIWSVGCIMAELLTGR--TLFPGTDHIDQL 238
>pdb|1SVH|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 8
pdb|1XH5|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|1XH6|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|1XH8|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|2GFC|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
Length = 350
Score = 48.1 bits (113), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 49/199 (24%), Positives = 90/199 (45%), Gaps = 25/199 (12%)
Query: 89 NKFSDANKLGEGGFGPVY-KGVLKKGDEIAVKRLPGRSGQGLREMK---NEASVIAKVQH 144
++F LG G FG V ++ G+ A+K L + L++++ NE ++ V
Sbjct: 41 DQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 100
Query: 145 KNLVRLLGCCIDKDEKILIYEYMPNKSLDFFL------FDPTKR-----MLLDWSANYS- 192
LV+L D ++ EY+P + L +P R ++L + +S
Sbjct: 101 PFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSL 160
Query: 193 ----SRLKVSNILLDKDINPKISDFGMARICGGNELQANTSRIVGTYGYMSPEYAIQGIF 248
LK N+L+D+ +++DFG A+ G T + GT Y++PE + +
Sbjct: 161 DLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGR-----TWXLCGTPEYLAPEIILSKGY 215
Query: 249 SIKSDVFSFGVLLLEIVSG 267
+ D ++ GVL+ E+ +G
Sbjct: 216 NKAVDWWALGVLIYEMAAG 234
>pdb|2C1A|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
Isoquinoline-5-Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl)amide
pdb|2C1B|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
(4r,2s)-5'-(4-(4-Chlorobenzyloxy)pyrrolidin-2-
Ylmethanesulfonyl)isoquinoline
pdb|2VO7|A Chain A, Structure Of Pka Complexed With 4-(4-Chlorobenzyl)-1-(7h-
Pyrrolo(2,3-D)pyrimidin-4-Yl)piperidin-4-Ylamine
pdb|3AG9|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1012
pdb|3AG9|B Chain B, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1012
Length = 351
Score = 48.1 bits (113), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 49/199 (24%), Positives = 90/199 (45%), Gaps = 25/199 (12%)
Query: 89 NKFSDANKLGEGGFGPVY-KGVLKKGDEIAVKRLPGRSGQGLREMK---NEASVIAKVQH 144
++F LG G FG V ++ G+ A+K L + L++++ NE ++ V
Sbjct: 42 DQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 101
Query: 145 KNLVRLLGCCIDKDEKILIYEYMPNKSLDFFL------FDPTKR-----MLLDWSANYS- 192
LV+L D ++ EY+P + L +P R ++L + +S
Sbjct: 102 PFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSL 161
Query: 193 ----SRLKVSNILLDKDINPKISDFGMARICGGNELQANTSRIVGTYGYMSPEYAIQGIF 248
LK N+L+D+ +++DFG A+ G T + GT Y++PE + +
Sbjct: 162 DLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGR-----TWXLCGTPEYLAPEIILSKGY 216
Query: 249 SIKSDVFSFGVLLLEIVSG 267
+ D ++ GVL+ E+ +G
Sbjct: 217 NKAVDWWALGVLIYEMAAG 235
>pdb|2UZT|A Chain A, Pka Structures Of Akt, Indazole-Pyridine Inhibitors
pdb|2UZU|E Chain E, Pka Structures Of Indazole-Pyridine Series Of Akt
Inhibitors
pdb|2UZV|A Chain A, Pka Structures Of Indazole-pyridine Series Of Akt
Inhibitors
pdb|2UZW|E Chain E, Pka Structures Of Indazole-Pyridine Series Of Akt
Inhibitors
Length = 336
Score = 48.1 bits (113), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 49/203 (24%), Positives = 91/203 (44%), Gaps = 25/203 (12%)
Query: 85 STATNKFSDANKLGEGGFGPVY-KGVLKKGDEIAVKRLPGRSGQGLREMK---NEASVIA 140
+ ++F LG G FG V ++ G+ A+K L + L++++ NE ++
Sbjct: 23 TAHLDQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQ 82
Query: 141 KVQHKNLVRLLGCCIDKDEKILIYEYMPNKSLDFFL------FDPTKR-----MLLDWSA 189
V LV+L D ++ EY+P + L +P R ++L +
Sbjct: 83 AVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEY 142
Query: 190 NYS-----SRLKVSNILLDKDINPKISDFGMARICGGNELQANTSRIVGTYGYMSPEYAI 244
+S LK N+L+D+ +++DFG A+ G T + GT Y++PE +
Sbjct: 143 LHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGR-----TWTLCGTPEYLAPEIIL 197
Query: 245 QGIFSIKSDVFSFGVLLLEIVSG 267
++ D ++ GVL+ E+ +G
Sbjct: 198 SKGYNKAVDWWALGVLIYEMAAG 220
>pdb|1BMK|A Chain A, The Complex Structure Of The Map Kinase P38SB218655
pdb|1P38|A Chain A, The Structure Of The Map Kinase P38 At 2.1 Angstoms
Resolution
Length = 379
Score = 48.1 bits (113), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 49/224 (21%), Positives = 101/224 (45%), Gaps = 31/224 (13%)
Query: 83 SVSTATNKFSDANKLGEGGFGPVYKGV-LKKGDEIAVKRL--PGRSGQGLREMKNEASVI 139
++ ++ + + +G G +G V K G +AVK+L P +S + E ++
Sbjct: 35 TIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLL 94
Query: 140 AKVQHKNLVRLLGC-----CIDKDEKILIYEYMPNKSLD--------------FFLFDPT 180
++H+N++ LL +++ + + ++ L+ F ++
Sbjct: 95 KHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQIL 154
Query: 181 KRMLLDWSANYSSR-LKVSNILLDKDINPKISDFGMARICGGNELQANTSRIVGTYGYMS 239
+ + SA+ R LK SN+ +++D KI DFG+AR + V T Y +
Sbjct: 155 RGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLAR-----HTDDEMTGYVATRWYRA 209
Query: 240 PEYAIQGI-FSIKSDVFSFGVLLLEIVSGKKTTGFYRTDSLTLL 282
PE + + ++ D++S G ++ E+++G+ T F TD + L
Sbjct: 210 PEIMLNWMHYNQTVDIWSVGCIMAELLTGR--TLFPGTDHIDQL 251
>pdb|3DND|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
pdb|3DNE|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
Length = 350
Score = 48.1 bits (113), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 49/199 (24%), Positives = 90/199 (45%), Gaps = 25/199 (12%)
Query: 89 NKFSDANKLGEGGFGPVY-KGVLKKGDEIAVKRLPGRSGQGLREMK---NEASVIAKVQH 144
++F LG G FG V ++ G+ A+K L + L++++ NE ++ V
Sbjct: 41 DQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 100
Query: 145 KNLVRLLGCCIDKDEKILIYEYMPNKSLDFFL------FDPTKR-----MLLDWSANYS- 192
LV+L D ++ EY+P + L +P R ++L + +S
Sbjct: 101 PFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSL 160
Query: 193 ----SRLKVSNILLDKDINPKISDFGMARICGGNELQANTSRIVGTYGYMSPEYAIQGIF 248
LK N+L+D+ +++DFG A+ G T + GT Y++PE + +
Sbjct: 161 DLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGR-----TWXLCGTPEYLAPEIILSKGY 215
Query: 249 SIKSDVFSFGVLLLEIVSG 267
+ D ++ GVL+ E+ +G
Sbjct: 216 NKAVDWWALGVLIYEMAAG 234
>pdb|1ZMW|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
T208aS212A INACTIVE DOUBLE MUTANT
pdb|1ZMW|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
T208aS212A INACTIVE DOUBLE MUTANT
Length = 327
Score = 47.8 bits (112), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 52/198 (26%), Positives = 84/198 (42%), Gaps = 37/198 (18%)
Query: 97 LGEGGFGPV--YKGVLKKGDEIAVKRLPGR--SGQGLREMKNEASVIAKVQHKNLVRLLG 152
+G+G F V + +L G E+AVK + + L+++ E ++ + H N+V+L
Sbjct: 22 IGKGNFAKVKLARHILT-GKEVAVKIIDKTQLNSSSLQKLFREVRIMKVLNHPNIVKLFE 80
Query: 153 CCIDKDEKILIYEYMPNKSLDFFLFDPTKRMLLDWSANYSS----------------RLK 196
+ L+ EY + +L + + A + LK
Sbjct: 81 VIETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARAKFRQIVSAVQYCHQKFIVHRDLK 140
Query: 197 VSNILLDKDINPKISDFGMA-RICGGNELQANTSRIVGTYGYMSPEYAIQGIFSIKS--- 252
N+LLD D+N KI+DFG + GN+L A +P YA +F K
Sbjct: 141 AENLLLDADMNIKIADFGFSNEFTFGNKLDAFCG---------APPYAAPELFQGKKYDG 191
Query: 253 ---DVFSFGVLLLEIVSG 267
DV+S GV+L +VSG
Sbjct: 192 PEVDVWSLGVILYTLVSG 209
>pdb|4AN2|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4AN3|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4AN9|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4ANB|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs
Length = 301
Score = 47.8 bits (112), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 50/203 (24%), Positives = 84/203 (41%), Gaps = 31/203 (15%)
Query: 89 NKFSDANKLGEGGFGPVYKGVLKKGDEIAVKRL------PGRSGQGLREMKNEASVIAKV 142
+ F ++LG G G V+K K + ++L P Q +RE++ V+ +
Sbjct: 9 DDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQ----VLHEC 64
Query: 143 QHKNLVRLLGCCIDKDEKILIYEYMPNKSLDFFLFDPTK-----------------RMLL 185
+V G E + E+M SLD L + L
Sbjct: 65 NSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQILGKVSIAVIKGLTYLR 124
Query: 186 DWSANYSSRLKVSNILLDKDINPKISDFGMARICGGNELQANTSRIVGTYGYMSPEYAIQ 245
+ +K SNIL++ K+ DFG++ G + + VGT YMSPE
Sbjct: 125 EKHKIMHRDVKPSNILVNSRGEIKLCDFGVS----GQLIDEMANEFVGTRSYMSPERLQG 180
Query: 246 GIFSIKSDVFSFGVLLLEIVSGK 268
+S++SD++S G+ L+E+ G+
Sbjct: 181 THYSVQSDIWSMGLSLVEMAVGR 203
>pdb|2F7E|E Chain E, Pka Complexed With
(S)-2-(1h-Indol-3-Yl)-1-(5-Isoquinolin-6-
Yl-Pyridin-3-Yloxymethyl-Etylamine
pdb|2F7X|E Chain E, Protein Kinase A Bound To
(s)-2-(1h-indol-3-yl)-1-[5-((e)-2-
Pyridin-4-yl-vinyl)-pyridin-3-yloxymethyl]-ethylamine
pdb|2F7Z|E Chain E, Protein Kinase A Bound To
(R)-1-(1h-Indol-3-Ylmethyl)-2-(2-
Pyridin-4-Yl-[1,7]naphtyridin-5-Yloxy)-Ehylamine
pdb|2OH0|E Chain E, Crystal Structure Of Protein Kinase A In Complex With
Pyridine-Pyrazolopyridine Based Inhibitors
pdb|2OJF|E Chain E, Crystal Structure Of Protein Kinase A In Complex With
Pyridine-Pyrazolopyridine Based Inhibitors
Length = 351
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 49/199 (24%), Positives = 90/199 (45%), Gaps = 25/199 (12%)
Query: 89 NKFSDANKLGEGGFGPVY-KGVLKKGDEIAVKRLPGRSGQGLREMK---NEASVIAKVQH 144
++F LG G FG V ++ G+ A+K L + L++++ NE ++ V
Sbjct: 42 DQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 101
Query: 145 KNLVRLLGCCIDKDEKILIYEYMPNKSLDFFL------FDPTKR-----MLLDWSANYS- 192
LV+L D ++ EY+P + L +P R ++L + +S
Sbjct: 102 PFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSL 161
Query: 193 ----SRLKVSNILLDKDINPKISDFGMARICGGNELQANTSRIVGTYGYMSPEYAIQGIF 248
LK N+L+D+ +++DFG A+ G T + GT Y++PE + +
Sbjct: 162 DLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGR-----TWTLCGTPEYLAPEIILSKGY 216
Query: 249 SIKSDVFSFGVLLLEIVSG 267
+ D ++ GVL+ E+ +G
Sbjct: 217 NKAVDWWALGVLIYEMAAG 235
>pdb|1Q61|A Chain A, Pka Triple Mutant Model Of Pkb
Length = 350
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 49/199 (24%), Positives = 89/199 (44%), Gaps = 25/199 (12%)
Query: 89 NKFSDANKLGEGGFGPVY-KGVLKKGDEIAVKRLPGRSGQGLREMK---NEASVIAKVQH 144
++F LG G FG V ++ G+ A+K L + L++++ NE ++ V
Sbjct: 41 DQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 100
Query: 145 KNLVRLLGCCIDKDEKILIYEYMPNKSLDFFL------FDPTKR-----MLLDWSANYS- 192
LV+L D ++ EY P + L +P R ++L + +S
Sbjct: 101 PFLVKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSL 160
Query: 193 ----SRLKVSNILLDKDINPKISDFGMARICGGNELQANTSRIVGTYGYMSPEYAIQGIF 248
LK N+++D+ K++DFG A+ G T + GT Y++PE + +
Sbjct: 161 DLIYRDLKPENLMIDQQGYIKVTDFGFAKRVKGR-----TWXLCGTPEYLAPEIILSKGY 215
Query: 249 SIKSDVFSFGVLLLEIVSG 267
+ D ++ GVL+ E+ +G
Sbjct: 216 NKAVDWWALGVLIYEMAAG 234
>pdb|3NX8|A Chain A, Human Camp Dependent Protein Kinase In Complex With Phenol
Length = 351
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 50/199 (25%), Positives = 90/199 (45%), Gaps = 25/199 (12%)
Query: 89 NKFSDANKLGEGGFGPVYKGVLKK-GDEIAVKRLPGRSGQGLREMK---NEASVIAKVQH 144
++F LG G FG V K+ G+ A+K L + L++++ NE ++ V
Sbjct: 42 DQFERIKTLGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 101
Query: 145 KNLVRLLGCCIDKDEKILIYEYMPNKSLDFFL------FDPTKR-----MLLDWSANYS- 192
LV+L D ++ EY+P + L +P R ++L + +S
Sbjct: 102 PFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSL 161
Query: 193 ----SRLKVSNILLDKDINPKISDFGMARICGGNELQANTSRIVGTYGYMSPEYAIQGIF 248
LK N+L+D+ +++DFG A+ G T + GT Y++PE + +
Sbjct: 162 DLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGR-----TWXLCGTPEYLAPEIILSKGY 216
Query: 249 SIKSDVFSFGVLLLEIVSG 267
+ D ++ GVL+ E+ +G
Sbjct: 217 NKAVDWWALGVLIYEMAAG 235
>pdb|3AGM|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-670
pdb|3L9L|A Chain A, Crystal Structure Of Pka With Compound 36
pdb|3L9L|B Chain B, Crystal Structure Of Pka With Compound 36
pdb|3OOG|A Chain A, Human Camp-Dependent Protein Kinase In Complex With A
Small Fragment
pdb|3OVV|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3OWP|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3OXT|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3P0M|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3POO|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
Length = 351
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 50/199 (25%), Positives = 90/199 (45%), Gaps = 25/199 (12%)
Query: 89 NKFSDANKLGEGGFGPVYKGVLKK-GDEIAVKRLPGRSGQGLREMK---NEASVIAKVQH 144
++F LG G FG V K+ G+ A+K L + L++++ NE ++ V
Sbjct: 42 DQFERIKTLGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 101
Query: 145 KNLVRLLGCCIDKDEKILIYEYMPNKSLDFFL------FDPTKR-----MLLDWSANYS- 192
LV+L D ++ EY+P + L +P R ++L + +S
Sbjct: 102 PFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSL 161
Query: 193 ----SRLKVSNILLDKDINPKISDFGMARICGGNELQANTSRIVGTYGYMSPEYAIQGIF 248
LK N+L+D+ +++DFG A+ G T + GT Y++PE + +
Sbjct: 162 DLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGR-----TWXLCGTPEYLAPEIILSKGY 216
Query: 249 SIKSDVFSFGVLLLEIVSG 267
+ D ++ GVL+ E+ +G
Sbjct: 217 NKAVDWWALGVLIYEMAAG 235
>pdb|3AGL|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1039
pdb|3AGL|B Chain B, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1039
pdb|3VQH|A Chain A, Bromine Sad Partially Resolves Multiple Binding Modes For
Pka Inhibitor H-89
Length = 351
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 50/199 (25%), Positives = 90/199 (45%), Gaps = 25/199 (12%)
Query: 89 NKFSDANKLGEGGFGPVYKGVLKK-GDEIAVKRLPGRSGQGLREMK---NEASVIAKVQH 144
++F LG G FG V K+ G+ A+K L + L++++ NE ++ V
Sbjct: 42 DQFERIKTLGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 101
Query: 145 KNLVRLLGCCIDKDEKILIYEYMPNKSLDFFL------FDPTKR-----MLLDWSANYS- 192
LV+L D ++ EY+P + L +P R ++L + +S
Sbjct: 102 PFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSL 161
Query: 193 ----SRLKVSNILLDKDINPKISDFGMARICGGNELQANTSRIVGTYGYMSPEYAIQGIF 248
LK N+L+D+ +++DFG A+ G T + GT Y++PE + +
Sbjct: 162 DLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGR-----TWXLCGTPEYLAPEIILSKGY 216
Query: 249 SIKSDVFSFGVLLLEIVSG 267
+ D ++ GVL+ E+ +G
Sbjct: 217 NKAVDWWALGVLIYEMAAG 235
>pdb|3F3Z|A Chain A, Crystal Structure Of Cryptosporidium Parvum Calcium
Dependent Protein Kinase Cgd7_1840 In Presence Of
Indirubin E804
Length = 277
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 50/199 (25%), Positives = 90/199 (45%), Gaps = 28/199 (14%)
Query: 91 FSDANKLGEGGFGPVYKGVLKKGDEI--AVKRLPGRSGQGLREMKNEASVIAKVQHKNLV 148
++ N +G G +G V K ++KG I A K++P + + K E ++ + H N++
Sbjct: 11 YTLENTIGRGSWGEV-KIAVQKGTRIRRAAKKIPKYFVEDVDRFKQEIEIMKSLDHPNII 69
Query: 149 RLLGCCIDKDEKILIYEYMPNKSL-------DFFLFDPTKRMLLDW--SANYSSRLKVSN 199
RL D + L+ E L F R++ D + Y +L V++
Sbjct: 70 RLYETFEDNTDIYLVMELCTGGELFERVVHKRVFRESDAARIMKDVLSAVAYCHKLNVAH 129
Query: 200 ---------ILLDKDINP-KISDFGM-ARICGGNELQANTSRIVGTYGYMSPEYAIQGIF 248
L D +P K+ DFG+ AR G ++ VGT Y+SP+ ++G++
Sbjct: 130 RDLKPENFLFLTDSPDSPLKLIDFGLAARFKPGKMMRTK----VGTPYYVSPQ-VLEGLY 184
Query: 249 SIKSDVFSFGVLLLEIVSG 267
+ D +S GV++ ++ G
Sbjct: 185 GPECDEWSAGVMMYVLLCG 203
>pdb|3PY3|A Chain A, Crystal Structure Of Phosphorylated P38alpha Map Kinase
Length = 380
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 50/224 (22%), Positives = 103/224 (45%), Gaps = 31/224 (13%)
Query: 83 SVSTATNKFSDANKLGEGGFGPVYKGV-LKKGDEIAVKRL--PGRSGQGLREMKNEASVI 139
++ ++ + + +G G +G V K G +AVK+L P +S + E ++
Sbjct: 36 TIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLL 95
Query: 140 AKVQHKNLVRLLGC-----CIDKDEKILIYEYMPNKSLD--------------FFLFDPT 180
++H+N++ LL +++ + + ++ L+ F ++
Sbjct: 96 KHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQIL 155
Query: 181 KRMLLDWSANYSSR-LKVSNILLDKDINPKISDFGMARICGGNELQANTSRIVGTYGYMS 239
+ + SA+ R LK SN+ +++D KI DFG+AR +E+ V T Y +
Sbjct: 156 RGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLAR-HTDDEMXGX----VATRWYRA 210
Query: 240 PEYAIQGI-FSIKSDVFSFGVLLLEIVSGKKTTGFYRTDSLTLL 282
PE + + ++ D++S G ++ E+++G+ T F TD + L
Sbjct: 211 PEIMLNWMHYNQTVDIWSVGCIMAELLTGR--TLFPGTDHIDQL 252
>pdb|3PFQ|A Chain A, Crystal Structure And Allosteric Activation Of Protein
Kinase C Beta Ii
Length = 674
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 27/75 (36%), Positives = 44/75 (58%), Gaps = 4/75 (5%)
Query: 195 LKVSNILLDKDINPKISDFGMARICGGNELQANTSR-IVGTYGYMSPEYAIQGIFSIKSD 253
LK+ N++LD + + KI+DFGM C N T++ GT Y++PE + D
Sbjct: 468 LKLDNVMLDSEGHIKIADFGM---CKENIWDGVTTKXFCGTPDYIAPEIIAYQPYGKSVD 524
Query: 254 VFSFGVLLLEIVSGK 268
++FGVLL E+++G+
Sbjct: 525 WWAFGVLLYEMLAGQ 539
>pdb|4E5A|X Chain X, The W197a Mutant Of P38a Map Kinase
Length = 360
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 49/224 (21%), Positives = 101/224 (45%), Gaps = 31/224 (13%)
Query: 83 SVSTATNKFSDANKLGEGGFGPVYKGV-LKKGDEIAVKRL--PGRSGQGLREMKNEASVI 139
++ ++ + + +G G +G V K G +AVK+L P +S + E ++
Sbjct: 16 TIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLL 75
Query: 140 AKVQHKNLVRLLGC-----CIDKDEKILIYEYMPNKSLD--------------FFLFDPT 180
++H+N++ LL +++ + + ++ L+ F ++
Sbjct: 76 KHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQIL 135
Query: 181 KRMLLDWSANYSSR-LKVSNILLDKDINPKISDFGMARICGGNELQANTSRIVGTYGYMS 239
+ + SA+ R LK SN+ +++D KI DFG+AR + V T Y +
Sbjct: 136 RGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLAR-----HTDDEMTGYVATRWYRA 190
Query: 240 PEYAIQGI-FSIKSDVFSFGVLLLEIVSGKKTTGFYRTDSLTLL 282
PE + + ++ D++S G ++ E+++G+ T F TD + L
Sbjct: 191 PEIMLNAMHYNQTVDIWSVGCIMAELLTGR--TLFPGTDHIDQL 232
>pdb|3L9M|A Chain A, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 18
pdb|3L9M|B Chain B, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 18
pdb|3L9N|A Chain A, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 27
Length = 351
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 50/199 (25%), Positives = 89/199 (44%), Gaps = 25/199 (12%)
Query: 89 NKFSDANKLGEGGFGPVYKGVLKK-GDEIAVKRLPGRSGQGLREMK---NEASVIAKVQH 144
++F LG G FG V K+ G+ A+K L + L++++ NE ++ V
Sbjct: 42 DQFERIKTLGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 101
Query: 145 KNLVRLLGCCIDKDEKILIYEYMPNKSLDFFL------FDPTKR-----MLLDWSANYS- 192
LV+L D ++ EY P + L +P R ++L + +S
Sbjct: 102 PFLVKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSL 161
Query: 193 ----SRLKVSNILLDKDINPKISDFGMARICGGNELQANTSRIVGTYGYMSPEYAIQGIF 248
LK N+++D+ K++DFG A+ G T + GT Y++PE + +
Sbjct: 162 DLIYRDLKPENLMIDQQGYIKVTDFGFAKRVKGR-----TWXLCGTPEYLAPEIILSKGY 216
Query: 249 SIKSDVFSFGVLLLEIVSG 267
+ D ++ GVL+ E+ +G
Sbjct: 217 NKAVDWWALGVLIYEMAAG 235
>pdb|2BUJ|A Chain A, Crystal Structure Of The Human Serine-Threonine Kinase 16
In Complex With Staurosporine
pdb|2BUJ|B Chain B, Crystal Structure Of The Human Serine-Threonine Kinase 16
In Complex With Staurosporine
Length = 317
Score = 47.4 bits (111), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 63/225 (28%), Positives = 98/225 (43%), Gaps = 39/225 (17%)
Query: 95 NKLGEGGFGPV--YKGVLKKGDEIAVKRLPGRSGQGLREMKNEASVIAKVQHKNLVRLLG 152
KLGEGGF V +G L G A+KR+ Q E + EA + H N++RL+
Sbjct: 35 QKLGEGGFSYVDLVEG-LHDGHFYALKRILCHEQQDREEAQREADMHRLFNHPNILRLVA 93
Query: 153 CCID----KDEKILIYEYMPNKSL-----------DFFLFDPTKRMLLD--------WSA 189
C+ K E L+ + +L +F D +LL +
Sbjct: 94 YCLRERGAKHEAWLLLPFFKRGTLWNEIERLKDKGNFLTEDQILWLLLGICRGLEAIHAK 153
Query: 190 NYSSR-LKVSNILLDKDINPKISDFG-MARICGGNE--LQANTSRIVG----TYGYMSPE 241
Y+ R LK +NILL + P + D G M + C E QA T + T Y +PE
Sbjct: 154 GYAHRDLKPTNILLGDEGQPVLMDLGSMNQACIHVEGSRQALTLQDWAAQRCTISYRAPE 213
Query: 242 -YAIQG--IFSIKSDVFSFGVLLLEIVSGKKTTG--FYRTDSLTL 281
+++Q + ++DV+S G +L ++ G+ F + DS+ L
Sbjct: 214 LFSVQSHCVIDERTDVWSLGCVLYAMMFGEGPYDMVFQKGDSVAL 258
>pdb|3P4K|A Chain A, The Third Conformation Of P38a Map Kinase Observed In
Phosphorylated P38a And In Solution
Length = 370
Score = 47.4 bits (111), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 49/224 (21%), Positives = 100/224 (44%), Gaps = 31/224 (13%)
Query: 83 SVSTATNKFSDANKLGEGGFGPVYKGV-LKKGDEIAVKRL--PGRSGQGLREMKNEASVI 139
++ ++ + +G G +G V K G +AVK+L P +S + E ++
Sbjct: 26 TIWEVPERYQNLAPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLL 85
Query: 140 AKVQHKNLVRLLGC-----CIDKDEKILIYEYMPNKSLD--------------FFLFDPT 180
++H+N++ LL +++ + + ++ L+ F ++
Sbjct: 86 KHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQIL 145
Query: 181 KRMLLDWSANYSSR-LKVSNILLDKDINPKISDFGMARICGGNELQANTSRIVGTYGYMS 239
+ + SA+ R LK SN+ +++D KI DFG+AR + V T Y +
Sbjct: 146 RGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLAR-----HTDDEMTGYVATRWYRA 200
Query: 240 PEYAIQGI-FSIKSDVFSFGVLLLEIVSGKKTTGFYRTDSLTLL 282
PE + + ++ D++S G ++ E+++G+ T F TD + L
Sbjct: 201 PEIMLNWMHYNQTVDIWSVGCIMAELLTGR--TLFPGTDHIDQL 242
>pdb|3MVJ|A Chain A, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
pdb|3MVJ|B Chain B, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
pdb|3MVJ|E Chain E, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
Length = 371
Score = 47.4 bits (111), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 50/199 (25%), Positives = 90/199 (45%), Gaps = 25/199 (12%)
Query: 89 NKFSDANKLGEGGFGPVYKGVLKK-GDEIAVKRLPGRSGQGLREMK---NEASVIAKVQH 144
++F LG G FG V K+ G+ A+K L + L++++ NE ++ V
Sbjct: 62 DQFERIKTLGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 121
Query: 145 KNLVRLLGCCIDKDEKILIYEYMPNKSLDFFL------FDPTKR-----MLLDWSANYS- 192
LV+L D ++ EY+P + L +P R ++L + +S
Sbjct: 122 PFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSL 181
Query: 193 ----SRLKVSNILLDKDINPKISDFGMARICGGNELQANTSRIVGTYGYMSPEYAIQGIF 248
LK N+L+D+ +++DFG A+ G T + GT Y++PE + +
Sbjct: 182 DLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGR-----TWXLCGTPEYLAPEIILSKGY 236
Query: 249 SIKSDVFSFGVLLLEIVSG 267
+ D ++ GVL+ E+ +G
Sbjct: 237 NKAVDWWALGVLIYEMAAG 255
>pdb|2A19|B Chain B, Pkr Kinase Domain- Eif2alpha- Amp-Pnp Complex.
pdb|2A19|C Chain C, Pkr Kinase Domain- Eif2alpha- Amp-Pnp Complex.
pdb|2A1A|B Chain B, Pkr Kinase Domain-Eif2alpha Complex
Length = 284
Score = 47.4 bits (111), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 71/286 (24%), Positives = 114/286 (39%), Gaps = 63/286 (22%)
Query: 91 FSDANKLGEGGFGPVYKGVLK-KGDEIAVKRLPGRSGQGLREMKNEASVIAKVQHKNLVR 149
F + +G GGFG V+K + G +KR+ + + RE+K +AK+ H N+V
Sbjct: 13 FKEIELIGSGGFGQVFKAKHRIDGKTYVIKRVKYNNEKAEREVK----ALAKLDHVNIVH 68
Query: 150 LLGCC--IDKD-----------------------EKILIYEYMP-------NKSLDFFLF 177
GC D D +K + +++ +K L LF
Sbjct: 69 YNGCWDGFDYDPETSSKNSSRSKTKCLFIQMEFCDKGTLEQWIEKRRGEKLDKVLALELF 128
Query: 178 DP-TKRMLLDWSANYSSR-LKVSNILLDKDINPKISDFGMARICGGNELQANTSRIVGTY 235
+ TK + S +R LK SNI L KI DFG+ + R GT
Sbjct: 129 EQITKGVDYIHSKKLINRDLKPSNIFLVDTKQVKIGDFGLVTSLKND---GKRXRSKGTL 185
Query: 236 GYMSPEYAIQGIFSIKSDVFSFGVLLLEIVSGKKTTGFYRTDSLTLLGYAWDLWTSNRTL 295
YMSPE + + D+++ G++L E+ L + A++ TS
Sbjct: 186 RYMSPEQISSQDYGKEVDLYALGLILAEL--------------LHVCDTAFE--TSKFFT 229
Query: 296 ELIDPILEDEYSSKHMLLRYVNIALLCVQESADDRPTMNEVVSMLT 341
+L D I+ D + K L + + +DRP +E++ LT
Sbjct: 230 DLRDGIISDIFDKKEKTL-----LQKLLSKKPEDRPNTSEILRTLT 270
>pdb|3OXI|A Chain A, Design And Synthesis Of Disubstituted Thiophene And
Thiazole Based Inhibitors Of Jnk For The Treatment Of
Neurodegenerative Diseases
pdb|3OY1|A Chain A, Highly Selective C-Jun N-Terminal Kinase (Jnk) 2 And 3
Inhibitors With In Vitro Cns-Like Pharmacokinetic
Properties
Length = 362
Score = 47.4 bits (111), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 53/210 (25%), Positives = 91/210 (43%), Gaps = 29/210 (13%)
Query: 83 SVSTATNKFSDANKLGEGGFGPV---YKGVLKKGDEIAVKRL--PGRSGQGLREMKNEAS 137
S T ++ + +G G G V Y VL + +A+K+L P ++ + E
Sbjct: 17 STFTVLKRYQNLKPIGSGAQGIVCAAYDAVLDRN--VAIKKLSRPFQNQTHAKRAYRELV 74
Query: 138 VIAKVQHKNLVRLLGCCIDK------DEKILIYEYMP------------NKSLDFFLFDP 179
++ V HKN++ LL + + L+ E M ++ + + L+
Sbjct: 75 LMKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIQMELDHERMSYLLYQM 134
Query: 180 TKRMLLDWSANYSSR-LKVSNILLDKDINPKISDFGMARICGGNELQANTSRIVGTYGYM 238
+ SA R LK SNI++ D KI DFG+AR G + + T +V Y Y
Sbjct: 135 LCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMM--TPYVVTRY-YR 191
Query: 239 SPEYAIQGIFSIKSDVFSFGVLLLEIVSGK 268
+PE + + D++S G ++ E+V K
Sbjct: 192 APEVILGMGYKENVDIWSVGCIMGEMVRHK 221
>pdb|3PTG|A Chain A, Design And Synthesis Of A Novel, Orally Efficacious
Tri-Substituted Thiophene Based Jnk Inhibitor
Length = 363
Score = 47.4 bits (111), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 53/210 (25%), Positives = 91/210 (43%), Gaps = 29/210 (13%)
Query: 83 SVSTATNKFSDANKLGEGGFGPV---YKGVLKKGDEIAVKRL--PGRSGQGLREMKNEAS 137
S T ++ + +G G G V Y VL + +A+K+L P ++ + E
Sbjct: 18 STFTVLKRYQNLKPIGSGAQGIVCAAYDAVLDRN--VAIKKLSRPFQNQTHAKRAYRELV 75
Query: 138 VIAKVQHKNLVRLLGCCIDK------DEKILIYEYMP------------NKSLDFFLFDP 179
++ V HKN++ LL + + L+ E M ++ + + L+
Sbjct: 76 LMKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIQMELDHERMSYLLYQM 135
Query: 180 TKRMLLDWSANYSSR-LKVSNILLDKDINPKISDFGMARICGGNELQANTSRIVGTYGYM 238
+ SA R LK SNI++ D KI DFG+AR G + + T +V Y Y
Sbjct: 136 LCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMM--TPYVVTRY-YR 192
Query: 239 SPEYAIQGIFSIKSDVFSFGVLLLEIVSGK 268
+PE + + D++S G ++ E+V K
Sbjct: 193 APEVILGMGYKENVDIWSVGCIMGEMVRHK 222
>pdb|3MTL|A Chain A, Crystal Structure Of The Pctaire1 Kinase In Complex With
Ind E804
Length = 324
Score = 47.4 bits (111), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 49/195 (25%), Positives = 86/195 (44%), Gaps = 25/195 (12%)
Query: 95 NKLGEGGFGPVYKGVLKKGDE-IAVK--RLPGRSGQGLREMKNEASVIAKVQHKNLVRLL 151
+KLGEG + VYKG K D +A+K RL G ++ E S++ ++H N+V L
Sbjct: 8 DKLGEGTYATVYKGKSKLTDNLVALKEIRLEHEEGAPCTAIR-EVSLLKDLKHANIVTLH 66
Query: 152 GCCIDKDEKILIYEYMPN---------------KSLDFFLFDPTKRMLLDWSANYSSR-L 195
+ L++EY+ ++ FLF + + R L
Sbjct: 67 DIIHTEKSLTLVFEYLDKDLKQYLDDCGNIINMHNVKLFLFQLLRGLAYCHRQKVLHRDL 126
Query: 196 KVSNILLDKDINPKISDFGMARICGGNELQANT-SRIVGTYGYMSPEYAIQGI-FSIKSD 253
K N+L+++ K++DFG+AR + T V T Y P+ + +S + D
Sbjct: 127 KPQNLLINERGELKLADFGLAR---AKSIPTKTYDNEVVTLWYRPPDILLGSTDYSTQID 183
Query: 254 VFSFGVLLLEIVSGK 268
++ G + E+ +G+
Sbjct: 184 MWGVGCIFYEMATGR 198
>pdb|3MFR|A Chain A, Cask-4m Cam Kinase Domain, Native
pdb|3MFS|A Chain A, Cask-4m Cam Kinase Domain, Amppnp
pdb|3MFT|A Chain A, Cask-4m Cam Kinase Domain, Mn2+
pdb|3MFU|A Chain A, Cask-4m Cam Kinase Domain, Amppnp-Mn2+
Length = 351
Score = 47.4 bits (111), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 47/200 (23%), Positives = 85/200 (42%), Gaps = 31/200 (15%)
Query: 97 LGEGGFGPVYKGVLKK-GDEIAVK-----RLPGRSGQGLREMKNEASVIAKVQHKNLVRL 150
+G+G F V + + ++ G + AVK + G ++K EAS+ ++H ++V L
Sbjct: 32 IGKGAFSVVRRCINRETGQQFAVKIVDVAKFTSSPGLSTEDLKREASICHMLKHPHIVEL 91
Query: 151 LGCCIDKDEKILIYEYMPNKSLDFFLFDPTKRMLLDWSANYSSRLKV---------SNIL 201
L +++E+M L F + + A S ++ N +
Sbjct: 92 LETYSSDGMLYMVFEFMDGADLCFEIVKRADAGFVYSEAVASHYMRQILEALRYCHDNNI 151
Query: 202 LDKDINP--------------KISDFGMARICGGNELQANTSRIVGTYGYMSPEYAIQGI 247
+ +D+ P K+ DFG+A G + L A VGT +M+PE +
Sbjct: 152 IHRDVKPENVLLASKENSAPVKLGDFGVAIQLGESGLVAGGR--VGTPHFMAPEVVKREP 209
Query: 248 FSIKSDVFSFGVLLLEIVSG 267
+ DV+ GV+L ++SG
Sbjct: 210 YGKPVDVWGCGVILFILLSG 229
>pdb|2B1P|A Chain A, Inhibitor Complex Of Jnk3
Length = 355
Score = 47.4 bits (111), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 53/210 (25%), Positives = 91/210 (43%), Gaps = 29/210 (13%)
Query: 83 SVSTATNKFSDANKLGEGGFGPV---YKGVLKKGDEIAVKRL--PGRSGQGLREMKNEAS 137
S T ++ + +G G G V Y VL + +A+K+L P ++ + E
Sbjct: 11 STFTVLKRYQNLKPIGSGAQGIVCAAYDAVLDRN--VAIKKLSRPFQNQTHAKRAYRELV 68
Query: 138 VIAKVQHKNLVRLLGCCIDK------DEKILIYEYMP------------NKSLDFFLFDP 179
++ V HKN++ LL + + L+ E M ++ + + L+
Sbjct: 69 LMKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIQMELDHERMSYLLYQM 128
Query: 180 TKRMLLDWSANYSSR-LKVSNILLDKDINPKISDFGMARICGGNELQANTSRIVGTYGYM 238
+ SA R LK SNI++ D KI DFG+AR G + + T +V Y Y
Sbjct: 129 LCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMM--TPYVVTRY-YR 185
Query: 239 SPEYAIQGIFSIKSDVFSFGVLLLEIVSGK 268
+PE + + D++S G ++ E+V K
Sbjct: 186 APEVILGMGYKENVDIWSVGCIMGEMVRHK 215
>pdb|4H36|A Chain A, Crystal Structure Of Jnk3 In Complex With Atf2 Peptide
pdb|4H39|A Chain A, Crystal Structure Of Jnk3 In Complex With Jip1 Peptide
pdb|4H3B|A Chain A, Crystal Structure Of Jnk3 In Complex With Sab Peptide
pdb|4H3B|C Chain C, Crystal Structure Of Jnk3 In Complex With Sab Peptide
Length = 356
Score = 47.4 bits (111), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 53/210 (25%), Positives = 91/210 (43%), Gaps = 29/210 (13%)
Query: 83 SVSTATNKFSDANKLGEGGFGPV---YKGVLKKGDEIAVKRL--PGRSGQGLREMKNEAS 137
S T ++ + +G G G V Y VL + +A+K+L P ++ + E
Sbjct: 12 STFTVLKRYQNLKPIGSGAQGIVCAAYDAVLDRN--VAIKKLSRPFQNQTHAKRAYRELV 69
Query: 138 VIAKVQHKNLVRLLGCCIDK------DEKILIYEYMP------------NKSLDFFLFDP 179
++ V HKN++ LL + + L+ E M ++ + + L+
Sbjct: 70 LMKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIQMELDHERMSYLLYQM 129
Query: 180 TKRMLLDWSANYSSR-LKVSNILLDKDINPKISDFGMARICGGNELQANTSRIVGTYGYM 238
+ SA R LK SNI++ D KI DFG+AR G + + T +V Y Y
Sbjct: 130 LCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMM--TPYVVTRY-YR 186
Query: 239 SPEYAIQGIFSIKSDVFSFGVLLLEIVSGK 268
+PE + + D++S G ++ E+V K
Sbjct: 187 APEVILGMGYKENVDIWSVGCIMGEMVRHK 216
>pdb|1PMN|A Chain A, Crystal Structure Of Jnk3 In Complex With An Imidazole-
Pyrimidine Inhibitor
pdb|1PMQ|A Chain A, The Structure Of Jnk3 In Complex With An Imidazole-
Pyrimidine Inhibitor
pdb|1PMU|A Chain A, The Crystal Structure Of Jnk3 In Complex With A
Phenantroline Inhibitor
pdb|1PMV|A Chain A, The Structure Of Jnk3 In Complex With A
Dihydroanthrapyrazole Inhibitor
Length = 364
Score = 47.4 bits (111), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 52/210 (24%), Positives = 91/210 (43%), Gaps = 29/210 (13%)
Query: 83 SVSTATNKFSDANKLGEGGFGPV---YKGVLKKGDEIAVKRL--PGRSGQGLREMKNEAS 137
S T ++ + +G G G V Y VL + +A+K+L P ++ + E
Sbjct: 19 STFTVLKRYQNLKPIGSGAQGIVCAAYDAVLDRN--VAIKKLSRPFQNQTHAKRAYRELV 76
Query: 138 VIAKVQHKNLVRLLGC------------------CIDKDEKILIYEYMPNKSLDFFLFDP 179
++ V HKN++ LL +D + +I + ++ + + L+
Sbjct: 77 LMKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIQMELDHERMSYLLYQM 136
Query: 180 TKRMLLDWSANYSSR-LKVSNILLDKDINPKISDFGMARICGGNELQANTSRIVGTYGYM 238
+ SA R LK SNI++ D KI DFG+AR G + + T +V Y Y
Sbjct: 137 LCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMM--TPYVVTRY-YR 193
Query: 239 SPEYAIQGIFSIKSDVFSFGVLLLEIVSGK 268
+PE + + D++S G ++ E+V K
Sbjct: 194 APEVILGMGYKENVDIWSVGCIMGEMVRHK 223
>pdb|2FSL|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a+f327s)
Activating Mutant Form-A
pdb|2FSM|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a+f327s)
Activating Mutant Form-B
Length = 367
Score = 47.4 bits (111), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 49/224 (21%), Positives = 101/224 (45%), Gaps = 31/224 (13%)
Query: 83 SVSTATNKFSDANKLGEGGFGPVYKGV-LKKGDEIAVKRL--PGRSGQGLREMKNEASVI 139
++ ++ + + +G G +G V K G +AVK+L P +S + E ++
Sbjct: 23 TIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLL 82
Query: 140 AKVQHKNLVRLLGC-----CIDKDEKILIYEYMPNKSLD--------------FFLFDPT 180
++H+N++ LL +++ + + ++ L+ F ++
Sbjct: 83 KHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQIL 142
Query: 181 KRMLLDWSANYSSR-LKVSNILLDKDINPKISDFGMARICGGNELQANTSRIVGTYGYMS 239
+ + SA+ R LK SN+ +++D KI DFG+AR + V T Y +
Sbjct: 143 RGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTAD-----EMTGYVATRWYRA 197
Query: 240 PEYAIQGI-FSIKSDVFSFGVLLLEIVSGKKTTGFYRTDSLTLL 282
PE + + ++ D++S G ++ E+++G+ T F TD + L
Sbjct: 198 PEIMLNWMHYNQTVDIWSVGCIMAELLTGR--TLFPGTDHIDQL 239
>pdb|1S9I|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 2 (Mek2)in A Complex With Ligand And Mgatp
pdb|1S9I|B Chain B, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 2 (Mek2)in A Complex With Ligand And Mgatp
Length = 354
Score = 47.4 bits (111), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 51/204 (25%), Positives = 87/204 (42%), Gaps = 33/204 (16%)
Query: 89 NKFSDANKLGEGGFGPVYKGVLKKGDEIAVKRL------PGRSGQGLREMKNEASVIAKV 142
+ F ++LG G G V K + I ++L P Q +RE++ V+ +
Sbjct: 16 DDFERISELGAGNGGVVTKVQHRPSGLIMARKLIHLEIKPAIRNQIIRELQ----VLHEC 71
Query: 143 QHKNLVRLLGCCIDKDEKILIYEYMPNKSLDFFLFDPTKRM------------------L 184
+V G E + E+M SLD L + KR+ L
Sbjct: 72 NSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKE-AKRIPEEILGKVSIAVLRGLAYL 130
Query: 185 LDWSANYSSRLKVSNILLDKDINPKISDFGMARICGGNELQANTSRIVGTYGYMSPEYAI 244
+ +K SNIL++ K+ DFG++ G + + + VGT YM+PE
Sbjct: 131 REKHQIMHRDVKPSNILVNSRGEIKLCDFGVS----GQLIDSMANSFVGTRSYMAPERLQ 186
Query: 245 QGIFSIKSDVFSFGVLLLEIVSGK 268
+S++SD++S G+ L+E+ G+
Sbjct: 187 GTHYSVQSDIWSMGLSLVELAVGR 210
>pdb|2FSO|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a)
Activating Mutant
Length = 367
Score = 47.4 bits (111), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 49/224 (21%), Positives = 101/224 (45%), Gaps = 31/224 (13%)
Query: 83 SVSTATNKFSDANKLGEGGFGPVYKGV-LKKGDEIAVKRL--PGRSGQGLREMKNEASVI 139
++ ++ + + +G G +G V K G +AVK+L P +S + E ++
Sbjct: 23 TIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLL 82
Query: 140 AKVQHKNLVRLLGC-----CIDKDEKILIYEYMPNKSLD--------------FFLFDPT 180
++H+N++ LL +++ + + ++ L+ F ++
Sbjct: 83 KHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQIL 142
Query: 181 KRMLLDWSANYSSR-LKVSNILLDKDINPKISDFGMARICGGNELQANTSRIVGTYGYMS 239
+ + SA+ R LK SN+ +++D KI DFG+AR + V T Y +
Sbjct: 143 RGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTAD-----EMTGYVATRWYRA 197
Query: 240 PEYAIQGI-FSIKSDVFSFGVLLLEIVSGKKTTGFYRTDSLTLL 282
PE + + ++ D++S G ++ E+++G+ T F TD + L
Sbjct: 198 PEIMLNWMHYNQTVDIWSVGCIMAELLTGR--TLFPGTDHIDQL 239
>pdb|2FST|X Chain X, Mitogen Activated Protein Kinase P38alpha (d176a+f327l)
Activating Mutant
Length = 367
Score = 47.4 bits (111), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 49/224 (21%), Positives = 101/224 (45%), Gaps = 31/224 (13%)
Query: 83 SVSTATNKFSDANKLGEGGFGPVYKGV-LKKGDEIAVKRL--PGRSGQGLREMKNEASVI 139
++ ++ + + +G G +G V K G +AVK+L P +S + E ++
Sbjct: 23 TIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLL 82
Query: 140 AKVQHKNLVRLLGC-----CIDKDEKILIYEYMPNKSLD--------------FFLFDPT 180
++H+N++ LL +++ + + ++ L+ F ++
Sbjct: 83 KHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQIL 142
Query: 181 KRMLLDWSANYSSR-LKVSNILLDKDINPKISDFGMARICGGNELQANTSRIVGTYGYMS 239
+ + SA+ R LK SN+ +++D KI DFG+AR + V T Y +
Sbjct: 143 RGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTAD-----EMTGYVATRWYRA 197
Query: 240 PEYAIQGI-FSIKSDVFSFGVLLLEIVSGKKTTGFYRTDSLTLL 282
PE + + ++ D++S G ++ E+++G+ T F TD + L
Sbjct: 198 PEIMLNWMHYNQTVDIWSVGCIMAELLTGR--TLFPGTDHIDQL 239
>pdb|2EXC|X Chain X, Inhibitor Complex Of Jnk3
Length = 356
Score = 47.4 bits (111), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 53/210 (25%), Positives = 91/210 (43%), Gaps = 29/210 (13%)
Query: 83 SVSTATNKFSDANKLGEGGFGPV---YKGVLKKGDEIAVKRL--PGRSGQGLREMKNEAS 137
S T ++ + +G G G V Y VL + +A+K+L P ++ + E
Sbjct: 12 STFTVLKRYQNLKPIGSGAQGIVCAAYDAVLDRN--VAIKKLSRPFQNQTHAKRAYRELV 69
Query: 138 VIAKVQHKNLVRLLGCCIDK------DEKILIYEYMP------------NKSLDFFLFDP 179
++ V HKN++ LL + + L+ E M ++ + + L+
Sbjct: 70 LMKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIQMELDHERMSYLLYQM 129
Query: 180 TKRMLLDWSANYSSR-LKVSNILLDKDINPKISDFGMARICGGNELQANTSRIVGTYGYM 238
+ SA R LK SNI++ D KI DFG+AR G + + T +V Y Y
Sbjct: 130 LCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMM--TPYVVTRY-YR 186
Query: 239 SPEYAIQGIFSIKSDVFSFGVLLLEIVSGK 268
+PE + + D++S G ++ E+V K
Sbjct: 187 APEVILGMGYKENVDIWSVGCIMGEMVRHK 216
>pdb|2O0U|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-{3-Cyano-6-[3-(1-
Piperidinyl)propanoyl]-4,5,6,7-Tetrahydrothieno[2,
3-C]pyridin-2-Yl}- 1-Naphthalenecarboxamide
pdb|2O2U|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-(3-Cyano-4,5,6,7-
Tetrahydro-1-Benzothien-2-Yl)-2-Fluorobenzamide
pdb|2ZDT|A Chain A, Crystal Structure Of Human Jnk3 Complexed With An
Isoquinolone Inhibitor
pdb|2ZDU|A Chain A, Crystal Structure Of Human Jnk3 Complexed With An
Isoquinolone Inhibitor
pdb|3DA6|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-(3-Methyl-
4-(3-(2-(Methylamino)pyrimidin-4-Yl)pyridin-2-Yloxy)
Naphthalen-1-Yl)-1h-Benzo[d]imidazol-2-Amine
pdb|2WAJ|A Chain A, Crystal Structure Of Human Jnk3 Complexed With A
1-Aryl-3,4- Dihydroisoquinoline Inhibitor
pdb|3V6R|A Chain A, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6R|B Chain B, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6S|A Chain A, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6S|B Chain B, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
Length = 364
Score = 47.4 bits (111), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 53/210 (25%), Positives = 91/210 (43%), Gaps = 29/210 (13%)
Query: 83 SVSTATNKFSDANKLGEGGFGPV---YKGVLKKGDEIAVKRL--PGRSGQGLREMKNEAS 137
S T ++ + +G G G V Y VL + +A+K+L P ++ + E
Sbjct: 18 STFTVLKRYQNLKPIGSGAQGIVCAAYDAVLDRN--VAIKKLSRPFQNQTHAKRAYRELV 75
Query: 138 VIAKVQHKNLVRLLGCCIDK------DEKILIYEYMP------------NKSLDFFLFDP 179
++ V HKN++ LL + + L+ E M ++ + + L+
Sbjct: 76 LMKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIQMELDHERMSYLLYQM 135
Query: 180 TKRMLLDWSANYSSR-LKVSNILLDKDINPKISDFGMARICGGNELQANTSRIVGTYGYM 238
+ SA R LK SNI++ D KI DFG+AR G + + T +V Y Y
Sbjct: 136 LCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMM--TPYVVTRY-YR 192
Query: 239 SPEYAIQGIFSIKSDVFSFGVLLLEIVSGK 268
+PE + + D++S G ++ E+V K
Sbjct: 193 APEVILGMGYKENVDIWSVGCIMGEMVRHK 222
>pdb|1Y6A|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
2-Anilino-5-Aryl-Oxazole Inhibitor
pdb|1Y6B|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
2-Anilino-5-Aryl-Oxazole Inhibitor
Length = 366
Score = 47.4 bits (111), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 28/72 (38%), Positives = 38/72 (52%)
Query: 195 LKVSNILLDKDINPKISDFGMARICGGNELQANTSRIVGTYGYMSPEYAIQGIFSIKSDV 254
L NILL + KI DFG+AR + +M+PE +++I+SDV
Sbjct: 224 LAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDV 283
Query: 255 FSFGVLLLEIVS 266
+SFGVLL EI S
Sbjct: 284 WSFGVLLWEIFS 295
>pdb|1UKH|A Chain A, Structural Basis For The Selective Inhibition Of Jnk1 By
The Scaffolding Protein Jip1 And Sp600125
pdb|1UKI|A Chain A, Structural Basis For The Selective Inhibition Of Jnk1 By
The Scaffolding Protein Jip1 And Sp600125
Length = 369
Score = 47.4 bits (111), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 50/209 (23%), Positives = 92/209 (44%), Gaps = 29/209 (13%)
Query: 83 SVSTATNKFSDANKLGEGGFGPV---YKGVLKKGDEIAVKRL--PGRSGQGLREMKNEAS 137
S T ++ + +G G G V Y +L++ +A+K+L P ++ + E
Sbjct: 18 STFTVLKRYQNLKPIGSGAQGIVCAAYDAILERN--VAIKKLSRPFQNQTHAKRAYRELV 75
Query: 138 VIAKVQHKNLVRLLGC------------------CIDKDEKILIYEYMPNKSLDFFLFDP 179
++ V HKN++ LL +D + +I + ++ + + L+
Sbjct: 76 LMKCVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLCQVIQMELDHERMSYLLYQM 135
Query: 180 TKRMLLDWSANYSSR-LKVSNILLDKDINPKISDFGMARICGGNELQANTSRIVGTYGYM 238
+ SA R LK SNI++ D KI DFG+AR G + + T +V Y Y
Sbjct: 136 LCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMM--TPYVVTRY-YR 192
Query: 239 SPEYAIQGIFSIKSDVFSFGVLLLEIVSG 267
+PE + + D++S G ++ E++ G
Sbjct: 193 APEVILGMGYKENVDIWSVGCIMGEMIKG 221
>pdb|4FVP|A Chain A, Crystal Structure Of The Jak2 Pseudokinase Domain (Apo
Form)
pdb|4FVQ|A Chain A, Crystal Structure Of The Jak2 Pseudokinase Domain
(Mg-Atp-Bound Form)
Length = 289
Score = 47.4 bits (111), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 54/204 (26%), Positives = 87/204 (42%), Gaps = 38/204 (18%)
Query: 97 LGEGGFGPVYKGVLKK-GD-------EIAVKRLPGRSGQGLREMKNEASVIAKVQHKNLV 148
LG+G F ++KGV ++ GD E+ +K L AS+++K+ HK+LV
Sbjct: 16 LGQGTFTKIFKGVRREVGDYGQLHETEVLLKVLDKAHRNYSESFFEAASMMSKLSHKHLV 75
Query: 149 RLLGCCIDKDEKILIYEYMPNKSLDFFLFDPTKRMLLDWSANYSSRLKVS---------- 198
G C+ DE IL+ E++ SLD +L + + W + +L +
Sbjct: 76 LNYGVCVCGDENILVQEFVKFGSLDTYLKKNKNCINILWKLEVAKQLAAAMHFLEENTLI 135
Query: 199 -------NILL-----DKDINP---KISDFGMARICGGNELQANTSRIVGTYGYMSPEYA 243
NILL K NP K+SD G++ ++ V +P+
Sbjct: 136 HGNVCAKNILLIREEDRKTGNPPFIKLSDPGISITVLPKDILQERIPWVPPECIENPKN- 194
Query: 244 IQGIFSIKSDVFSFGVLLLEIVSG 267
++ +D +SFG L EI SG
Sbjct: 195 ----LNLATDKWSFGTTLWEICSG 214
>pdb|2R0I|A Chain A, Crystal Structure Of A Kinase Mark2PAR-1 Mutant
pdb|2R0I|B Chain B, Crystal Structure Of A Kinase Mark2PAR-1 Mutant
Length = 327
Score = 47.4 bits (111), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 52/198 (26%), Positives = 83/198 (41%), Gaps = 37/198 (18%)
Query: 97 LGEGGFGPV--YKGVLKKGDEIAVKRLPGR--SGQGLREMKNEASVIAKVQHKNLVRLLG 152
+G+G F V + +L G E+AVK + + L+++ E ++ + H N+V+L
Sbjct: 22 IGKGNFAKVKLARHILT-GKEVAVKIIDKTQLNSSSLQKLFREVRIMKVLNHPNIVKLFE 80
Query: 153 CCIDKDEKILIYEYMPNKSLDFFLFDPTKRMLLDWSANYSS----------------RLK 196
+ L+ EY + +L + + A + LK
Sbjct: 81 VIETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARAKFRQIVSAVQYCHQKFIVHRDLK 140
Query: 197 VSNILLDKDINPKISDFGMA-RICGGNELQANTSRIVGTYGYMSPEYAIQGIFSIKS--- 252
N+LLD D+N KI+DFG + GN+L SP YA +F K
Sbjct: 141 AENLLLDADMNIKIADFGFSNEFTFGNKLDTFCG---------SPPYAAPELFQGKKYDG 191
Query: 253 ---DVFSFGVLLLEIVSG 267
DV+S GV+L +VSG
Sbjct: 192 PEVDVWSLGVILYTLVSG 209
>pdb|3TTJ|A Chain A, Crystal Structure Of Jnk3 Complexed With Cc-359, A Jnk
Inhibitor For The Prevention Of Ischemia-Reperfusion
Injury
pdb|3TTI|A Chain A, Crystal Structure Of Jnk3 Complexed With Cc-930, An Orally
Active Anti-Fibrotic Jnk Inhibitor
Length = 464
Score = 47.4 bits (111), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 52/210 (24%), Positives = 91/210 (43%), Gaps = 29/210 (13%)
Query: 83 SVSTATNKFSDANKLGEGGFGPV---YKGVLKKGDEIAVKRL--PGRSGQGLREMKNEAS 137
S T ++ + +G G G V Y VL + +A+K+L P ++ + E
Sbjct: 56 STFTVLKRYQNLKPIGSGAQGIVCAAYDAVLDRN--VAIKKLSRPFQNQTHAKRAYRELV 113
Query: 138 VIAKVQHKNLVRLLGC------------------CIDKDEKILIYEYMPNKSLDFFLFDP 179
++ V HKN++ LL +D + +I + ++ + + L+
Sbjct: 114 LMKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIQMELDHERMSYLLYQM 173
Query: 180 TKRMLLDWSANYSSR-LKVSNILLDKDINPKISDFGMARICGGNELQANTSRIVGTYGYM 238
+ SA R LK SNI++ D KI DFG+AR G + + T +V Y Y
Sbjct: 174 LCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMM--TPYVVTRY-YR 230
Query: 239 SPEYAIQGIFSIKSDVFSFGVLLLEIVSGK 268
+PE + + D++S G ++ E+V K
Sbjct: 231 APEVILGMGYKENVDIWSVGCIMGEMVRHK 260
>pdb|2XRW|A Chain A, Linear Binding Motifs For Jnk And For Calcineurin
Antagonistically Control The Nuclear Shuttling Of Nfat4
Length = 371
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 50/209 (23%), Positives = 92/209 (44%), Gaps = 29/209 (13%)
Query: 83 SVSTATNKFSDANKLGEGGFGPV---YKGVLKKGDEIAVKRL--PGRSGQGLREMKNEAS 137
S T ++ + +G G G V Y +L++ +A+K+L P ++ + E
Sbjct: 19 STFTVLKRYQNLKPIGSGAQGIVCAAYDAILERN--VAIKKLSRPFQNQTHAKRAYRELV 76
Query: 138 VIAKVQHKNLVRLLGC------------------CIDKDEKILIYEYMPNKSLDFFLFDP 179
++ V HKN++ LL +D + +I + ++ + + L+
Sbjct: 77 LMKCVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLCQVIQMELDHERMSYLLYQM 136
Query: 180 TKRMLLDWSANYSSR-LKVSNILLDKDINPKISDFGMARICGGNELQANTSRIVGTYGYM 238
+ SA R LK SNI++ D KI DFG+AR G + + T +V Y Y
Sbjct: 137 LCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMM--TPYVVTRY-YR 193
Query: 239 SPEYAIQGIFSIKSDVFSFGVLLLEIVSG 267
+PE + + D++S G ++ E++ G
Sbjct: 194 APEVILGMGYKENVDIWSVGCIMGEMIKG 222
>pdb|3VUD|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M1 In Map
Kinase Jnk1
Length = 370
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 50/209 (23%), Positives = 92/209 (44%), Gaps = 29/209 (13%)
Query: 83 SVSTATNKFSDANKLGEGGFGPV---YKGVLKKGDEIAVKRL--PGRSGQGLREMKNEAS 137
S T ++ + +G G G V Y +L++ +A+K+L P ++ + E
Sbjct: 18 STFTVLKRYQNLKPIGSGAQGIVCAAYDAILERN--VAIKKLSRPFQNQTHAKRAYRELV 75
Query: 138 VIAKVQHKNLVRLLGC------------------CIDKDEKILIYEYMPNKSLDFFLFDP 179
++ V HKN++ LL +D + +I + ++ + + L+
Sbjct: 76 LMKCVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLCQVIQMELDHERMSYLLYQM 135
Query: 180 TKRMLLDWSANYSSR-LKVSNILLDKDINPKISDFGMARICGGNELQANTSRIVGTYGYM 238
+ SA R LK SNI++ D KI DFG+AR G + + T +V Y Y
Sbjct: 136 LCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMM--TPYVVTRY-YR 192
Query: 239 SPEYAIQGIFSIKSDVFSFGVLLLEIVSG 267
+PE + + D++S G ++ E++ G
Sbjct: 193 APEVILGMGYKENVDIWSVGCIMGEMIKG 221
>pdb|1ZMU|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Wild Type
pdb|1ZMU|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Wild Type
Length = 327
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 52/198 (26%), Positives = 83/198 (41%), Gaps = 37/198 (18%)
Query: 97 LGEGGFGPV--YKGVLKKGDEIAVKRLPGR--SGQGLREMKNEASVIAKVQHKNLVRLLG 152
+G+G F V + +L G E+AVK + + L+++ E ++ + H N+V+L
Sbjct: 22 IGKGNFAKVKLARHILT-GKEVAVKIIDKTQLNSSSLQKLFREVRIMKVLNHPNIVKLFE 80
Query: 153 CCIDKDEKILIYEYMPNKSLDFFLFDPTKRMLLDWSANYSS----------------RLK 196
+ L+ EY + +L + + A + LK
Sbjct: 81 VIETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARAKFRQIVSAVQYCHQKFIVHRDLK 140
Query: 197 VSNILLDKDINPKISDFGMA-RICGGNELQANTSRIVGTYGYMSPEYAIQGIFSIKS--- 252
N+LLD D+N KI+DFG + GN+L SP YA +F K
Sbjct: 141 AENLLLDADMNIKIADFGFSNEFTFGNKLDTFCG---------SPPYAAPELFQGKKYDG 191
Query: 253 ---DVFSFGVLLLEIVSG 267
DV+S GV+L +VSG
Sbjct: 192 PEVDVWSLGVILYTLVSG 209
>pdb|3VHK|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Back Pocket Binder
Length = 368
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 28/72 (38%), Positives = 38/72 (52%)
Query: 195 LKVSNILLDKDINPKISDFGMARICGGNELQANTSRIVGTYGYMSPEYAIQGIFSIKSDV 254
L NILL + KI DFG+AR + +M+PE +++I+SDV
Sbjct: 226 LAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDV 285
Query: 255 FSFGVLLLEIVS 266
+SFGVLL EI S
Sbjct: 286 WSFGVLLWEIFS 297
>pdb|2WEI|A Chain A, Crystal Structure Of The Kinase Domain Of Cryptosporidium
Parvum Calcium Dependent Protein Kinase In Complex With
3- Mb-Pp1
Length = 287
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 67/233 (28%), Positives = 104/233 (44%), Gaps = 38/233 (16%)
Query: 86 TATNKFSDANKLGEGGFGPVYKGVLK-KGDEIAVKRLPGRSGQG--LREMKNEASVIAKV 142
T +++ LG+G FG V K + E AVK + S + + E ++ K+
Sbjct: 19 TFAERYNIVCMLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKL 78
Query: 143 QHKNLVRLLGCCIDKDEKILIYE-YMPNKSLD-------FFLFDPTKRMLLDWSA----- 189
H N+++L D ++ E Y + D F D + + +S
Sbjct: 79 DHPNIMKLFEILEDSSSFYIVGELYTGGELFDEIIKRKRFSEHDAARIIKQVFSGITYMH 138
Query: 190 --NYSSR-LKVSNILLD---KDINPKISDFGMARICGGNELQANTSRI--VGTYGYMSPE 241
N R LK NILL+ KD + KI DFG++ C Q NT +GT Y++PE
Sbjct: 139 KHNIVHRDLKPENILLESKEKDCDIKIIDFGLS-TC----FQQNTKMKDRIGTAYYIAPE 193
Query: 242 YAIQGIFSIKSDVFSFGVLLLEIVSGKKTTGFYRTDSLTLL------GYAWDL 288
++G + K DV+S GV+L ++SG T FY + +L YA+DL
Sbjct: 194 -VLRGTYDEKCDVWSAGVILYILLSG--TPPFYGKNEYDILKRVETGKYAFDL 243
>pdb|2OK1|A Chain A, Crystal Structure Of Jnk3 Bound To N-Benzyl-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|2P33|A Chain A, Synthesis And Sar Of Aminopyrimidines As Novel C-Jun N-
Terminal Kinase (Jnk) Inhibitors
pdb|3CGF|A Chain A, Irak-4 Inhibitors (Part Ii)- A Structure Based Assessment
Of Imidazo[1,2 A]pyridine Binding
pdb|3CGO|A Chain A, Irak-4 Inhibitors (Part Ii)- A Structure Based Assessment
Of Imidazo[1,2 A]pyridine Binding
pdb|3G90|X Chain X, Jnk-3 Bound To
(Z)-5-Fluoro-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)
Methyl)-3-(Hydroxyimino)indolin-2-One
pdb|3G9N|A Chain A, Jnk3 Bound To
(Z)-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)methyl)-3-
(Hydroxyimino)-4-Phenylindolin-2-One
pdb|3G9L|X Chain X, Jnk3 Bound To
(Z)-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)methyl)-3-
(Hydroxyimino)-4-Styrylindolin-2-One
Length = 365
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 52/210 (24%), Positives = 91/210 (43%), Gaps = 29/210 (13%)
Query: 83 SVSTATNKFSDANKLGEGGFGPV---YKGVLKKGDEIAVKRL--PGRSGQGLREMKNEAS 137
S T ++ + +G G G V Y VL + +A+K+L P ++ + E
Sbjct: 19 STFTVLKRYQNLKPIGSGAQGIVCAAYDAVLDRN--VAIKKLSRPFQNQTHAKRAYRELV 76
Query: 138 VIAKVQHKNLVRLLGC------------------CIDKDEKILIYEYMPNKSLDFFLFDP 179
++ V HKN++ LL +D + +I + ++ + + L+
Sbjct: 77 LMKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIQMELDHERMSYLLYQM 136
Query: 180 TKRMLLDWSANYSSR-LKVSNILLDKDINPKISDFGMARICGGNELQANTSRIVGTYGYM 238
+ SA R LK SNI++ D KI DFG+AR G + + T +V Y Y
Sbjct: 137 LCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMM--TPYVVTRY-YR 193
Query: 239 SPEYAIQGIFSIKSDVFSFGVLLLEIVSGK 268
+PE + + D++S G ++ E+V K
Sbjct: 194 APEVILGMGYKENVDIWSVGCIMGEMVRHK 223
>pdb|2I0E|A Chain A, Structure Of Catalytic Domain Of Human Protein Kinase C
Beta Ii Complexed With A Bisindolylmaleimide Inhibitor
pdb|2I0E|B Chain B, Structure Of Catalytic Domain Of Human Protein Kinase C
Beta Ii Complexed With A Bisindolylmaleimide Inhibitor
Length = 353
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 27/75 (36%), Positives = 44/75 (58%), Gaps = 4/75 (5%)
Query: 195 LKVSNILLDKDINPKISDFGMARICGGNELQANTSR-IVGTYGYMSPEYAIQGIFSIKSD 253
LK+ N++LD + + KI+DFGM C N T++ GT Y++PE + D
Sbjct: 147 LKLDNVMLDSEGHIKIADFGM---CKENIWDGVTTKXFCGTPDYIAPEIIAYQPYGKSVD 203
Query: 254 VFSFGVLLLEIVSGK 268
++FGVLL E+++G+
Sbjct: 204 WWAFGVLLYEMLAGQ 218
>pdb|3IW4|A Chain A, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
pdb|3IW4|B Chain B, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
pdb|3IW4|C Chain C, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
Length = 360
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 26/75 (34%), Positives = 45/75 (60%), Gaps = 4/75 (5%)
Query: 195 LKVSNILLDKDINPKISDFGMARICGGNELQANTSR-IVGTYGYMSPEYAIQGIFSIKSD 253
LK+ N++LD + + KI+DFGM C + + T+R GT Y++PE + D
Sbjct: 146 LKLDNVMLDSEGHIKIADFGM---CKEHMMDGVTTREFCGTPDYIAPEIIAYQPYGKSVD 202
Query: 254 VFSFGVLLLEIVSGK 268
+++GVLL E+++G+
Sbjct: 203 WWAYGVLLYEMLAGQ 217
>pdb|3DFA|A Chain A, Crystal Structure Of Kinase Domain Of Calcium-dependent
Protein Kinase Cgd3_920 From Cryptosporidium Parvum
Length = 286
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 67/233 (28%), Positives = 104/233 (44%), Gaps = 38/233 (16%)
Query: 86 TATNKFSDANKLGEGGFGPVYKGVLK-KGDEIAVKRLPGRSGQG--LREMKNEASVIAKV 142
T +++ LG+G FG V K + E AVK + S + + E ++ K+
Sbjct: 19 TFAERYNIVCMLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKL 78
Query: 143 QHKNLVRLLGCCIDKDEKILIYE-YMPNKSLD-------FFLFDPTKRMLLDWSA----- 189
H N+++L D ++ E Y + D F D + + +S
Sbjct: 79 DHPNIMKLFEILEDSSSFYIVGELYTGGELFDEIIKRKRFSEHDAARIIKQVFSGITYMH 138
Query: 190 --NYSSR-LKVSNILLD---KDINPKISDFGMARICGGNELQANTSRI--VGTYGYMSPE 241
N R LK NILL+ KD + KI DFG++ C Q NT +GT Y++PE
Sbjct: 139 KHNIVHRDLKPENILLESKEKDCDIKIIDFGLS-TC----FQQNTKMKDRIGTAYYIAPE 193
Query: 242 YAIQGIFSIKSDVFSFGVLLLEIVSGKKTTGFYRTDSLTLL------GYAWDL 288
++G + K DV+S GV+L ++SG T FY + +L YA+DL
Sbjct: 194 -VLRGTYDEKCDVWSAGVILYILLSG--TPPFYGKNEYDILKRVETGKYAFDL 243
>pdb|3VHE|A Chain A, Crystal Structure Of Human Vegfr2 Kinase Domain With A
Novel Pyrrolopyrimidine Inhibitor
Length = 359
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 28/72 (38%), Positives = 38/72 (52%)
Query: 195 LKVSNILLDKDINPKISDFGMARICGGNELQANTSRIVGTYGYMSPEYAIQGIFSIKSDV 254
L NILL + KI DFG+AR + +M+PE +++I+SDV
Sbjct: 219 LAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDV 278
Query: 255 FSFGVLLLEIVS 266
+SFGVLL EI S
Sbjct: 279 WSFGVLLWEIFS 290
>pdb|3VID|A Chain A, Crystal Structure Of Human Vegfr2 Kinase Domain With
Compound A
Length = 356
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 28/72 (38%), Positives = 38/72 (52%)
Query: 195 LKVSNILLDKDINPKISDFGMARICGGNELQANTSRIVGTYGYMSPEYAIQGIFSIKSDV 254
L NILL + KI DFG+AR + +M+PE +++I+SDV
Sbjct: 217 LAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDV 276
Query: 255 FSFGVLLLEIVS 266
+SFGVLL EI S
Sbjct: 277 WSFGVLLWEIFS 288
>pdb|3D7Z|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biphenyl
Amide Inhibitor
Length = 360
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 50/224 (22%), Positives = 100/224 (44%), Gaps = 31/224 (13%)
Query: 83 SVSTATNKFSDANKLGEGGFGPVYKGV-LKKGDEIAVKRL--PGRSGQGLREMKNEASVI 139
++ ++ + + +G G +G V K G +AVK+L P +S + E ++
Sbjct: 16 TIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLL 75
Query: 140 AKVQHKNLVRLLGC------------------CIDKD-EKILIYEYMPNKSLDFFLFDPT 180
++H+N++ LL + D I+ + + + + F ++
Sbjct: 76 KHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKXQKLTDDHVQFLIYQIL 135
Query: 181 KRMLLDWSANYSSR-LKVSNILLDKDINPKISDFGMARICGGNELQANTSRIVGTYGYMS 239
+ + SA+ R LK SN+ +++D KI DFG+AR + V T Y +
Sbjct: 136 RGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLAR-----HTDDEMTGYVATRWYRA 190
Query: 240 PEYAIQGI-FSIKSDVFSFGVLLLEIVSGKKTTGFYRTDSLTLL 282
PE + + ++ D++S G ++ E+++G+ T F TD + L
Sbjct: 191 PEIMLNWMHYNQTVDIWSVGCIMAELLTGR--TLFPGTDHIDQL 232
>pdb|1JNK|A Chain A, The C-Jun N-Terminal Kinase (Jnk3s) Complexed With
Mgamp-Pnp
Length = 423
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 53/210 (25%), Positives = 91/210 (43%), Gaps = 29/210 (13%)
Query: 83 SVSTATNKFSDANKLGEGGFGPV---YKGVLKKGDEIAVKRL--PGRSGQGLREMKNEAS 137
S T ++ + +G G G V Y VL + +A+K+L P ++ + E
Sbjct: 56 STFTVLKRYQNLKPIGSGAQGIVCAAYDAVLDRN--VAIKKLSRPFQNQTHAKRAYRELV 113
Query: 138 VIAKVQHKNLVRLLGCCIDK------DEKILIYEYMP------------NKSLDFFLFDP 179
++ V HKN++ LL + + L+ E M ++ + + L+
Sbjct: 114 LMKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIQMELDHERMSYLLYQM 173
Query: 180 TKRMLLDWSANYSSR-LKVSNILLDKDINPKISDFGMARICGGNELQANTSRIVGTYGYM 238
+ SA R LK SNI++ D KI DFG+AR G + + T +V Y Y
Sbjct: 174 LCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMM--TPYVVTRY-YR 230
Query: 239 SPEYAIQGIFSIKSDVFSFGVLLLEIVSGK 268
+PE + + D++S G ++ E+V K
Sbjct: 231 APEVILGMGYKENVDIWSVGCIMGEMVRHK 260
>pdb|3OD6|X Chain X, Crystal Structure Of P38alpha Y323t Active Mutant
Length = 360
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 49/224 (21%), Positives = 101/224 (45%), Gaps = 31/224 (13%)
Query: 83 SVSTATNKFSDANKLGEGGFGPVYKGV-LKKGDEIAVKRL--PGRSGQGLREMKNEASVI 139
++ ++ + + +G G +G V K G +AVK+L P +S + E ++
Sbjct: 16 TIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLL 75
Query: 140 AKVQHKNLVRLLGC-----CIDKDEKILIYEYMPNKSLD--------------FFLFDPT 180
++H+N++ LL +++ + + ++ L+ F ++
Sbjct: 76 KHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQIL 135
Query: 181 KRMLLDWSANYSSR-LKVSNILLDKDINPKISDFGMARICGGNELQANTSRIVGTYGYMS 239
+ + SA+ R LK SN+ +++D KI DFG+AR + V T Y +
Sbjct: 136 RGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLAR-----HTDDEMTGYVATRWYRA 190
Query: 240 PEYAIQGI-FSIKSDVFSFGVLLLEIVSGKKTTGFYRTDSLTLL 282
PE + + ++ D++S G ++ E+++G+ T F TD + L
Sbjct: 191 PEIMLNWMHYNQTVDIWSVGCIMAELLTGR--TLFPGTDHIDQL 232
>pdb|2BAQ|A Chain A, P38alpha Bound To Ro3201195
Length = 365
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 49/224 (21%), Positives = 101/224 (45%), Gaps = 31/224 (13%)
Query: 83 SVSTATNKFSDANKLGEGGFGPVYKGV-LKKGDEIAVKRL--PGRSGQGLREMKNEASVI 139
++ ++ + + +G G +G V K G +AVK+L P +S + E ++
Sbjct: 21 TIWEVPERYQNLSPIGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLL 80
Query: 140 AKVQHKNLVRLLGC-----CIDKDEKILIYEYMPNKSLD--------------FFLFDPT 180
++H+N++ LL +++ + + ++ L+ F ++
Sbjct: 81 KHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQIL 140
Query: 181 KRMLLDWSANYSSR-LKVSNILLDKDINPKISDFGMARICGGNELQANTSRIVGTYGYMS 239
+ + SA+ R LK SN+ +++D KI DFG+AR + V T Y +
Sbjct: 141 RGLKYIHSADIIHRDLKPSNLAVNEDXELKILDFGLAR-----HTDDEMTGYVATRWYRA 195
Query: 240 PEYAIQGI-FSIKSDVFSFGVLLLEIVSGKKTTGFYRTDSLTLL 282
PE + + ++ D++S G ++ E+++G+ T F TD + L
Sbjct: 196 PEIMLNWMHYNQTVDIWSVGCIMAELLTGR--TLFPGTDHIDQL 237
>pdb|2LGC|A Chain A, Joint Nmr And X-Ray Refinement Reveals The Structure Of A
Novel Dibenzo[a,D]cycloheptenone InhibitorP38 MAP KINASE
COMPLEX IN Solution
Length = 359
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 49/224 (21%), Positives = 101/224 (45%), Gaps = 31/224 (13%)
Query: 83 SVSTATNKFSDANKLGEGGFGPVYKGV-LKKGDEIAVKRL--PGRSGQGLREMKNEASVI 139
++ ++ + + +G G +G V K G +AVK+L P +S + E ++
Sbjct: 21 TIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLL 80
Query: 140 AKVQHKNLVRLLGC-----CIDKDEKILIYEYMPNKSLD--------------FFLFDPT 180
++H+N++ LL +++ + + ++ L+ F ++
Sbjct: 81 KHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQIL 140
Query: 181 KRMLLDWSANYSSR-LKVSNILLDKDINPKISDFGMARICGGNELQANTSRIVGTYGYMS 239
+ + SA+ R LK SN+ +++D KI DFG+AR + V T Y +
Sbjct: 141 RGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLAR-----HTDDEMTGYVATRWYRA 195
Query: 240 PEYAIQGI-FSIKSDVFSFGVLLLEIVSGKKTTGFYRTDSLTLL 282
PE + + ++ D++S G ++ E+++G+ T F TD + L
Sbjct: 196 PEIMLNWMHYNQTVDIWSVGCIMAELLTGR--TLFPGTDHIDQL 237
>pdb|3ODY|X Chain X, Crystal Structure Of P38alpha Y323q Active Mutant
Length = 360
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 49/224 (21%), Positives = 101/224 (45%), Gaps = 31/224 (13%)
Query: 83 SVSTATNKFSDANKLGEGGFGPVYKGV-LKKGDEIAVKRL--PGRSGQGLREMKNEASVI 139
++ ++ + + +G G +G V K G +AVK+L P +S + E ++
Sbjct: 16 TIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLL 75
Query: 140 AKVQHKNLVRLLGC-----CIDKDEKILIYEYMPNKSLD--------------FFLFDPT 180
++H+N++ LL +++ + + ++ L+ F ++
Sbjct: 76 KHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQIL 135
Query: 181 KRMLLDWSANYSSR-LKVSNILLDKDINPKISDFGMARICGGNELQANTSRIVGTYGYMS 239
+ + SA+ R LK SN+ +++D KI DFG+AR + V T Y +
Sbjct: 136 RGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLAR-----HTDDEMTGYVATRWYRA 190
Query: 240 PEYAIQGI-FSIKSDVFSFGVLLLEIVSGKKTTGFYRTDSLTLL 282
PE + + ++ D++S G ++ E+++G+ T F TD + L
Sbjct: 191 PEIMLNWMHYNQTVDIWSVGCIMAELLTGR--TLFPGTDHIDQL 232
>pdb|3OEF|X Chain X, Crystal Structure Of Y323f Inactive Mutant Of P38alpha Map
Kinase
Length = 360
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 49/224 (21%), Positives = 101/224 (45%), Gaps = 31/224 (13%)
Query: 83 SVSTATNKFSDANKLGEGGFGPVYKGV-LKKGDEIAVKRL--PGRSGQGLREMKNEASVI 139
++ ++ + + +G G +G V K G +AVK+L P +S + E ++
Sbjct: 16 TIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLL 75
Query: 140 AKVQHKNLVRLLGC-----CIDKDEKILIYEYMPNKSLD--------------FFLFDPT 180
++H+N++ LL +++ + + ++ L+ F ++
Sbjct: 76 KHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQIL 135
Query: 181 KRMLLDWSANYSSR-LKVSNILLDKDINPKISDFGMARICGGNELQANTSRIVGTYGYMS 239
+ + SA+ R LK SN+ +++D KI DFG+AR + V T Y +
Sbjct: 136 RGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLAR-----HTDDEMTGYVATRWYRA 190
Query: 240 PEYAIQGI-FSIKSDVFSFGVLLLEIVSGKKTTGFYRTDSLTLL 282
PE + + ++ D++S G ++ E+++G+ T F TD + L
Sbjct: 191 PEIMLNWMHYNQTVDIWSVGCIMAELLTGR--TLFPGTDHIDQL 232
>pdb|2BAJ|A Chain A, P38alpha Bound To Pyrazolourea
pdb|2BAK|A Chain A, P38alpha Map Kinase Bound To Mpaq
pdb|4A9Y|A Chain A, P38alpha Map Kinase Bound To Cmpd 8
pdb|4AA0|A Chain A, P38alpha Map Kinase Bound To Cmpd 2
pdb|4AA4|A Chain A, P38alpha Map Kinase Bound To Cmpd 22
pdb|4AAC|A Chain A, P38alpha Map Kinase Bound To Cmpd 29
Length = 365
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 49/224 (21%), Positives = 101/224 (45%), Gaps = 31/224 (13%)
Query: 83 SVSTATNKFSDANKLGEGGFGPVYKGV-LKKGDEIAVKRL--PGRSGQGLREMKNEASVI 139
++ ++ + + +G G +G V K G +AVK+L P +S + E ++
Sbjct: 21 TIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLL 80
Query: 140 AKVQHKNLVRLLGC-----CIDKDEKILIYEYMPNKSLD--------------FFLFDPT 180
++H+N++ LL +++ + + ++ L+ F ++
Sbjct: 81 KHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQIL 140
Query: 181 KRMLLDWSANYSSR-LKVSNILLDKDINPKISDFGMARICGGNELQANTSRIVGTYGYMS 239
+ + SA+ R LK SN+ +++D KI DFG+AR + V T Y +
Sbjct: 141 RGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLAR-----HTDDEMTGYVATRWYRA 195
Query: 240 PEYAIQGI-FSIKSDVFSFGVLLLEIVSGKKTTGFYRTDSLTLL 282
PE + + ++ D++S G ++ E+++G+ T F TD + L
Sbjct: 196 PEIMLNWMHYNQTVDIWSVGCIMAELLTGR--TLFPGTDHIDQL 237
>pdb|3S3I|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
Length = 349
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 49/224 (21%), Positives = 101/224 (45%), Gaps = 31/224 (13%)
Query: 83 SVSTATNKFSDANKLGEGGFGPVYKGV-LKKGDEIAVKRL--PGRSGQGLREMKNEASVI 139
++ ++ + + +G G +G V K G +AVK+L P +S + E ++
Sbjct: 13 TIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLL 72
Query: 140 AKVQHKNLVRLLGC-----CIDKDEKILIYEYMPNKSLD--------------FFLFDPT 180
++H+N++ LL +++ + + ++ L+ F ++
Sbjct: 73 KHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQIL 132
Query: 181 KRMLLDWSANYSSR-LKVSNILLDKDINPKISDFGMARICGGNELQANTSRIVGTYGYMS 239
+ + SA+ R LK SN+ +++D KI DFG+AR + V T Y +
Sbjct: 133 RGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLAR-----HTDDEMTGYVATRWYRA 187
Query: 240 PEYAIQGI-FSIKSDVFSFGVLLLEIVSGKKTTGFYRTDSLTLL 282
PE + + ++ D++S G ++ E+++G+ T F TD + L
Sbjct: 188 PEIMLNWMHYNQTVDIWSVGCIMAELLTGR--TLFPGTDHIDQL 229
>pdb|3HRB|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|3MW1|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|2YIS|A Chain A, Triazolopyridine Inhibitors Of P38 Kinase.
pdb|2YIW|A Chain A, Triazolopyridine Inhibitors Of P38 Kinase
Length = 359
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 49/224 (21%), Positives = 101/224 (45%), Gaps = 31/224 (13%)
Query: 83 SVSTATNKFSDANKLGEGGFGPVYKGV-LKKGDEIAVKRL--PGRSGQGLREMKNEASVI 139
++ ++ + + +G G +G V K G +AVK+L P +S + E ++
Sbjct: 15 TIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLL 74
Query: 140 AKVQHKNLVRLLGC-----CIDKDEKILIYEYMPNKSLD--------------FFLFDPT 180
++H+N++ LL +++ + + ++ L+ F ++
Sbjct: 75 KHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQIL 134
Query: 181 KRMLLDWSANYSSR-LKVSNILLDKDINPKISDFGMARICGGNELQANTSRIVGTYGYMS 239
+ + SA+ R LK SN+ +++D KI DFG+AR + V T Y +
Sbjct: 135 RGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLAR-----HTDDEMTGYVATRWYRA 189
Query: 240 PEYAIQGI-FSIKSDVFSFGVLLLEIVSGKKTTGFYRTDSLTLL 282
PE + + ++ D++S G ++ E+++G+ T F TD + L
Sbjct: 190 PEIMLNWMHYNQTVDIWSVGCIMAELLTGR--TLFPGTDHIDQL 231
>pdb|1DI9|A Chain A, The Structure Of P38 Mitogen-Activated Protein Kinase In
Complex With 4-[3-Methylsulfanylanilino]-6,7-
Dimethoxyquinazoline
pdb|1KV1|A Chain A, P38 Map Kinase In Complex With Inhibitor 1
pdb|1KV2|A Chain A, Human P38 Map Kinase In Complex With Birb 796
pdb|1WBO|A Chain A, Fragment Based P38 Inhibitors
pdb|1W7H|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W82|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W83|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W84|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1ZZ2|A Chain A, Two Classes Of P38alpha Map Kinase Inhibitors Having A
Common Diphenylether Core But Exhibiting Divergent
Binding Modes
pdb|1WBN|A Chain A, Fragment Based P38 Inhibitors
pdb|1WBS|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1WBT|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-based Lead Generation.
pdb|1WBV|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1WBW|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1ZYJ|A Chain A, Human P38 Map Kinase In Complex With Inhibitor 1a
pdb|2ZAZ|A Chain A, Crystal Structure Of P38 In Complex With 4-Anilino
Quinoline Inhibitor
pdb|2ZB0|A Chain A, Crystal Structure Of P38 In Complex With Biphenyl Amide
Inhibitor
pdb|2ZB1|A Chain A, Crystal Structure Of P38 In Complex With Biphenyl Amide
Inhibitor
pdb|3HL7|A Chain A, Crystal Structure Of Human P38alpha Complexed With Sd-0006
pdb|3HLL|A Chain A, Crystal Structure Of Human P38alpha Complexed With
Ph-797804
pdb|3HP2|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Pyridinone Compound
pdb|3HP5|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Pyrimidopyridazinone Compound
pdb|3KF7|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Triazolopyrimidine Compound
pdb|3MGY|A Chain A, Mutagenesis Of P38 Map Kinase Eshtablishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3ROC|A Chain A, Crystal Structure Of Human P38 Alpha Complexed With A
Pyrimidinone Compound
pdb|3RIN|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|4E5B|A Chain A, Structure Of P38a Map Kinase Without Bog
pdb|4E6A|A Chain A, P38a-Pia23 Complex
pdb|4E6C|A Chain A, P38a-perifosine Complex
pdb|4E8A|A Chain A, The Crystal Structure Of P38a Map Kinase In Complex With
Pia24
Length = 360
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 49/224 (21%), Positives = 101/224 (45%), Gaps = 31/224 (13%)
Query: 83 SVSTATNKFSDANKLGEGGFGPVYKGV-LKKGDEIAVKRL--PGRSGQGLREMKNEASVI 139
++ ++ + + +G G +G V K G +AVK+L P +S + E ++
Sbjct: 16 TIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLL 75
Query: 140 AKVQHKNLVRLLGC-----CIDKDEKILIYEYMPNKSLD--------------FFLFDPT 180
++H+N++ LL +++ + + ++ L+ F ++
Sbjct: 76 KHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQIL 135
Query: 181 KRMLLDWSANYSSR-LKVSNILLDKDINPKISDFGMARICGGNELQANTSRIVGTYGYMS 239
+ + SA+ R LK SN+ +++D KI DFG+AR + V T Y +
Sbjct: 136 RGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLAR-----HTDDEMTGYVATRWYRA 190
Query: 240 PEYAIQGI-FSIKSDVFSFGVLLLEIVSGKKTTGFYRTDSLTLL 282
PE + + ++ D++S G ++ E+++G+ T F TD + L
Sbjct: 191 PEIMLNWMHYNQTVDIWSVGCIMAELLTGR--TLFPGTDHIDQL 232
>pdb|3ODZ|X Chain X, Crystal Structure Of P38alpha Y323r Active Mutant
Length = 360
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 49/224 (21%), Positives = 101/224 (45%), Gaps = 31/224 (13%)
Query: 83 SVSTATNKFSDANKLGEGGFGPVYKGV-LKKGDEIAVKRL--PGRSGQGLREMKNEASVI 139
++ ++ + + +G G +G V K G +AVK+L P +S + E ++
Sbjct: 16 TIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLL 75
Query: 140 AKVQHKNLVRLLGC-----CIDKDEKILIYEYMPNKSLD--------------FFLFDPT 180
++H+N++ LL +++ + + ++ L+ F ++
Sbjct: 76 KHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQIL 135
Query: 181 KRMLLDWSANYSSR-LKVSNILLDKDINPKISDFGMARICGGNELQANTSRIVGTYGYMS 239
+ + SA+ R LK SN+ +++D KI DFG+AR + V T Y +
Sbjct: 136 RGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLAR-----HTDDEMTGYVATRWYRA 190
Query: 240 PEYAIQGI-FSIKSDVFSFGVLLLEIVSGKKTTGFYRTDSLTLL 282
PE + + ++ D++S G ++ E+++G+ T F TD + L
Sbjct: 191 PEIMLNWMHYNQTVDIWSVGCIMAELLTGR--TLFPGTDHIDQL 232
>pdb|3NNX|A Chain A, Crystal Structure Of Phosphorylated P38 Alpha In Complex
With Dp802
Length = 354
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 49/224 (21%), Positives = 101/224 (45%), Gaps = 31/224 (13%)
Query: 83 SVSTATNKFSDANKLGEGGFGPVYKGV-LKKGDEIAVKRL--PGRSGQGLREMKNEASVI 139
++ ++ + + +G G +G V K G +AVK+L P +S + E ++
Sbjct: 16 TIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLL 75
Query: 140 AKVQHKNLVRLLGC-----CIDKDEKILIYEYMPNKSLD--------------FFLFDPT 180
++H+N++ LL +++ + + ++ L+ F ++
Sbjct: 76 KHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQIL 135
Query: 181 KRMLLDWSANYSSR-LKVSNILLDKDINPKISDFGMARICGGNELQANTSRIVGTYGYMS 239
+ + SA+ R LK SN+ +++D KI DFG+AR + V T Y +
Sbjct: 136 RGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLAR-----HTDDEMTGXVATRWYRA 190
Query: 240 PEYAIQGI-FSIKSDVFSFGVLLLEIVSGKKTTGFYRTDSLTLL 282
PE + + ++ D++S G ++ E+++G+ T F TD + L
Sbjct: 191 PEIMLNWMHYNQTVDIWSVGCIMAELLTGR--TLFPGTDHIDQL 232
>pdb|3HVC|A Chain A, Crystal Structure Of Human P38alpha Map Kinase
Length = 362
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 49/224 (21%), Positives = 101/224 (45%), Gaps = 31/224 (13%)
Query: 83 SVSTATNKFSDANKLGEGGFGPVYKGV-LKKGDEIAVKRL--PGRSGQGLREMKNEASVI 139
++ ++ + + +G G +G V K G +AVK+L P +S + E ++
Sbjct: 18 TIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLL 77
Query: 140 AKVQHKNLVRLLGC-----CIDKDEKILIYEYMPNKSLD--------------FFLFDPT 180
++H+N++ LL +++ + + ++ L+ F ++
Sbjct: 78 KHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQIL 137
Query: 181 KRMLLDWSANYSSR-LKVSNILLDKDINPKISDFGMARICGGNELQANTSRIVGTYGYMS 239
+ + SA+ R LK SN+ +++D KI DFG+AR + V T Y +
Sbjct: 138 RGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLAR-----HTDDEMTGYVATRWYRA 192
Query: 240 PEYAIQGI-FSIKSDVFSFGVLLLEIVSGKKTTGFYRTDSLTLL 282
PE + + ++ D++S G ++ E+++G+ T F TD + L
Sbjct: 193 PEIMLNWMHYNQTVDIWSVGCIMAELLTGR--TLFPGTDHIDQL 234
>pdb|1TKI|A Chain A, Autoinhibited Serine Kinase Domain Of The Giant Muscle
Protein Titin
pdb|1TKI|B Chain B, Autoinhibited Serine Kinase Domain Of The Giant Muscle
Protein Titin
Length = 321
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 46/199 (23%), Positives = 84/199 (42%), Gaps = 26/199 (13%)
Query: 90 KFSDANKLGEGGFGPVYKGVLKKGDEIAVKRLPGRSGQGLREMKNEASVIAKVQHKNLVR 149
K+ A LG G FG V++ V + + + G +K E S++ +H+N++
Sbjct: 6 KYMIAEDLGRGEFGIVHRCVETSSKKTYMAKFVKVKGTDQVLVKKEISILNIARHRNILH 65
Query: 150 LLGCCIDKDEKILIYEYMPNKSLDFF------LFDPTKRMLLDWSANYSSRLKV--SNIL 201
L +E ++I+E++ LD F F+ +R ++ + L+ S+ +
Sbjct: 66 LHESFESMEELVMIFEFISG--LDIFERINTSAFELNEREIVSYVHQVCEALQFLHSHNI 123
Query: 202 LDKDINP-------------KISDFGMARICGGNELQANTSRIVGTYGYMSPEYAIQGIF 248
DI P KI +FG AR + N + Y +PE +
Sbjct: 124 GHFDIRPENIIYQTRRSSTIKIIEFGQARQLKPGD---NFRLLFTAPEYYAPEVHQHDVV 180
Query: 249 SIKSDVFSFGVLLLEIVSG 267
S +D++S G L+ ++SG
Sbjct: 181 STATDMWSLGTLVYVLLSG 199
>pdb|2NPQ|A Chain A, A Novel Lipid Binding Site In The P38 Alpha Map Kinase
Length = 367
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 49/224 (21%), Positives = 101/224 (45%), Gaps = 31/224 (13%)
Query: 83 SVSTATNKFSDANKLGEGGFGPVYKGV-LKKGDEIAVKRL--PGRSGQGLREMKNEASVI 139
++ ++ + + +G G +G V K G +AVK+L P +S + E ++
Sbjct: 23 TIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLL 82
Query: 140 AKVQHKNLVRLLGC-----CIDKDEKILIYEYMPNKSLD--------------FFLFDPT 180
++H+N++ LL +++ + + ++ L+ F ++
Sbjct: 83 KHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQIL 142
Query: 181 KRMLLDWSANYSSR-LKVSNILLDKDINPKISDFGMARICGGNELQANTSRIVGTYGYMS 239
+ + SA+ R LK SN+ +++D KI DFG+AR + V T Y +
Sbjct: 143 RGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLAR-----HTDDEMTGYVATRWYRA 197
Query: 240 PEYAIQGI-FSIKSDVFSFGVLLLEIVSGKKTTGFYRTDSLTLL 282
PE + + ++ D++S G ++ E+++G+ T F TD + L
Sbjct: 198 PEIMLNWMHYNQTVDIWSVGCIMAELLTGR--TLFPGTDHIDQL 239
>pdb|1M7Q|A Chain A, Crystal Structure Of P38 Map Kinase In Complex With A
Dihydroquinazolinone Inhibitor
pdb|1OUK|A Chain A, The Structure Of P38 Alpha In Complex With A
Pyridinylimidazole Inhibitor
pdb|1OUY|A Chain A, The Structure Of P38 Alpha In Complex With A
Dihydropyrido- Pyrimidine Inhibitor
pdb|1R39|A Chain A, The Structure Of P38alpha
pdb|1YQJ|A Chain A, Crystal Structure Of P38 Alpha In Complex With A Selective
Pyridazine Inhibitor
pdb|2OKR|A Chain A, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2OKR|D Chain D, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|A Chain A, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|B Chain B, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|1WFC|A Chain A, Structure Of Apo, Unphosphorylated, P38 Mitogen Activated
Protein Kinase P38 (P38 Map Kinase) The Mammalian
Homologue Of The Yeast Hog1 Protein
pdb|3DS6|A Chain A, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|B Chain B, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|C Chain C, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|D Chain D, P38 Complex With A Phthalazine Inhibitor
pdb|3FC1|X Chain X, Crystal Structure Of P38 Kinase Bound To
Pyrimido-Pyridazinone Inhibitor
pdb|3GFE|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridinone Inhibitor
pdb|3ITZ|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridazine Inhibitor
pdb|3LHJ|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridinone Inhibitor.
pdb|3ZYA|A Chain A, Human P38 Map Kinase In Complex With 2-Amino-Phenylamino-
Dibenzosuberone
pdb|3U8W|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Triazolopyridazinone Inhibitor
Length = 366
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 49/224 (21%), Positives = 101/224 (45%), Gaps = 31/224 (13%)
Query: 83 SVSTATNKFSDANKLGEGGFGPVYKGV-LKKGDEIAVKRL--PGRSGQGLREMKNEASVI 139
++ ++ + + +G G +G V K G +AVK+L P +S + E ++
Sbjct: 22 TIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLL 81
Query: 140 AKVQHKNLVRLLGC-----CIDKDEKILIYEYMPNKSLD--------------FFLFDPT 180
++H+N++ LL +++ + + ++ L+ F ++
Sbjct: 82 KHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQIL 141
Query: 181 KRMLLDWSANYSSR-LKVSNILLDKDINPKISDFGMARICGGNELQANTSRIVGTYGYMS 239
+ + SA+ R LK SN+ +++D KI DFG+AR + V T Y +
Sbjct: 142 RGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLAR-----HTDDEMTGYVATRWYRA 196
Query: 240 PEYAIQGI-FSIKSDVFSFGVLLLEIVSGKKTTGFYRTDSLTLL 282
PE + + ++ D++S G ++ E+++G+ T F TD + L
Sbjct: 197 PEIMLNWMHYNQTVDIWSVGCIMAELLTGR--TLFPGTDHIDQL 238
>pdb|3NNU|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp1376
pdb|3NNV|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp437
pdb|3NNW|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp802
Length = 354
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 49/224 (21%), Positives = 101/224 (45%), Gaps = 31/224 (13%)
Query: 83 SVSTATNKFSDANKLGEGGFGPVYKGV-LKKGDEIAVKRL--PGRSGQGLREMKNEASVI 139
++ ++ + + +G G +G V K G +AVK+L P +S + E ++
Sbjct: 16 TIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLL 75
Query: 140 AKVQHKNLVRLLGC-----CIDKDEKILIYEYMPNKSLD--------------FFLFDPT 180
++H+N++ LL +++ + + ++ L+ F ++
Sbjct: 76 KHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQIL 135
Query: 181 KRMLLDWSANYSSR-LKVSNILLDKDINPKISDFGMARICGGNELQANTSRIVGTYGYMS 239
+ + SA+ R LK SN+ +++D KI DFG+AR + V T Y +
Sbjct: 136 RGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLAR-----HTDDEMTGYVATRWYRA 190
Query: 240 PEYAIQGI-FSIKSDVFSFGVLLLEIVSGKKTTGFYRTDSLTLL 282
PE + + ++ D++S G ++ E+++G+ T F TD + L
Sbjct: 191 PEIMLNWMHYNQTVDIWSVGCIMAELLTGR--TLFPGTDHIDQL 232
>pdb|1IAN|A Chain A, Human P38 Map Kinase Inhibitor Complex
pdb|2QD9|A Chain A, P38 Alpha Map Kinase Inhibitor Based On Heterobicyclic
Scaffolds
pdb|2RG5|A Chain A, Phenylalanine Pyrrolotriazine P38 Alpha Map Kinase
Inhibitor Compound 11b
pdb|2RG6|A Chain A, Phenylalanine Pyrrolotriazine P38 Alpha Map Kinase
Inhibitor Compound 11j
pdb|3C5U|A Chain A, P38 Alpha Map Kinase Complexed With A Benzothiazole Based
Inhibitor
pdb|3BV2|A Chain A, Morpholino Pyrrolotriazine P38 Alpha Map Kinase Inhibitor
Compound 30
pdb|3BV3|A Chain A, Morpholino Pyrrolotriazine P38 Alpha Map Kinase Inhibitor
Compound 2
pdb|3BX5|A Chain A, P38 Alpha Map Kinase Complexed With Bms-640994
pdb|3L8X|A Chain A, P38 Alpha Kinase Complexed With A Pyrazolo-Pyrimidine
Based Inhibitor
pdb|3NWW|A Chain A, P38 Alpha Kinase Complexed With A
2-Aminothiazol-5-Yl-Pyrimidine Based Inhibitor
pdb|3MVL|A Chain A, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7k
pdb|3MVL|B Chain B, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7k
pdb|3MVM|A Chain A, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7v
pdb|3MVM|B Chain B, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7v
pdb|3OCG|A Chain A, P38 Alpha Kinase Complexed With A 5-Amino-Pyrazole Based
Inhibitor
pdb|3S4Q|A Chain A, P38 Alpha Kinase Complexed With A Pyrazolo-Triazine Based
Inhibitor
Length = 366
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 49/224 (21%), Positives = 101/224 (45%), Gaps = 31/224 (13%)
Query: 83 SVSTATNKFSDANKLGEGGFGPVYKGV-LKKGDEIAVKRL--PGRSGQGLREMKNEASVI 139
++ ++ + + +G G +G V K G +AVK+L P +S + E ++
Sbjct: 22 TIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLL 81
Query: 140 AKVQHKNLVRLLGC-----CIDKDEKILIYEYMPNKSLD--------------FFLFDPT 180
++H+N++ LL +++ + + ++ L+ F ++
Sbjct: 82 KHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQIL 141
Query: 181 KRMLLDWSANYSSR-LKVSNILLDKDINPKISDFGMARICGGNELQANTSRIVGTYGYMS 239
+ + SA+ R LK SN+ +++D KI DFG+AR + V T Y +
Sbjct: 142 RGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLAR-----HTDDEMTGYVATRWYRA 196
Query: 240 PEYAIQGI-FSIKSDVFSFGVLLLEIVSGKKTTGFYRTDSLTLL 282
PE + + ++ D++S G ++ E+++G+ T F TD + L
Sbjct: 197 PEIMLNWMHYNQTVDIWSVGCIMAELLTGR--TLFPGTDHIDQL 238
>pdb|1ZZL|A Chain A, Crystal Structure Of P38 With Triazolopyridine
pdb|2YIX|A Chain A, Triazolopyridine Inhibitors Of P38
Length = 351
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 49/224 (21%), Positives = 101/224 (45%), Gaps = 31/224 (13%)
Query: 83 SVSTATNKFSDANKLGEGGFGPVYKGV-LKKGDEIAVKRL--PGRSGQGLREMKNEASVI 139
++ ++ + + +G G +G V K G +AVK+L P +S + E ++
Sbjct: 13 TIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLL 72
Query: 140 AKVQHKNLVRLLGC-----CIDKDEKILIYEYMPNKSLD--------------FFLFDPT 180
++H+N++ LL +++ + + ++ L+ F ++
Sbjct: 73 KHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQIL 132
Query: 181 KRMLLDWSANYSSR-LKVSNILLDKDINPKISDFGMARICGGNELQANTSRIVGTYGYMS 239
+ + SA+ R LK SN+ +++D KI DFG+AR + V T Y +
Sbjct: 133 RGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLAR-----HTDDEMTGYVATRWYRA 187
Query: 240 PEYAIQGI-FSIKSDVFSFGVLLLEIVSGKKTTGFYRTDSLTLL 282
PE + + ++ D++S G ++ E+++G+ T F TD + L
Sbjct: 188 PEIMLNWMHYNQTVDIWSVGCIMAELLTGR--TLFPGTDHIDQL 229
>pdb|3HEC|A Chain A, P38 In Complex With Imatinib
pdb|3HEG|A Chain A, P38 In Complex With Sorafenib
Length = 348
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 49/224 (21%), Positives = 101/224 (45%), Gaps = 31/224 (13%)
Query: 83 SVSTATNKFSDANKLGEGGFGPVYKGV-LKKGDEIAVKRL--PGRSGQGLREMKNEASVI 139
++ ++ + + +G G +G V K G +AVK+L P +S + E ++
Sbjct: 12 TIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLL 71
Query: 140 AKVQHKNLVRLLGC-----CIDKDEKILIYEYMPNKSLD--------------FFLFDPT 180
++H+N++ LL +++ + + ++ L+ F ++
Sbjct: 72 KHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQIL 131
Query: 181 KRMLLDWSANYSSR-LKVSNILLDKDINPKISDFGMARICGGNELQANTSRIVGTYGYMS 239
+ + SA+ R LK SN+ +++D KI DFG+AR + V T Y +
Sbjct: 132 RGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLAR-----HTDDEMTGYVATRWYRA 186
Query: 240 PEYAIQGI-FSIKSDVFSFGVLLLEIVSGKKTTGFYRTDSLTLL 282
PE + + ++ D++S G ++ E+++G+ T F TD + L
Sbjct: 187 PEIMLNWMHYNQTVDIWSVGCIMAELLTGR--TLFPGTDHIDQL 228
>pdb|3ZSG|A Chain A, X-Ray Structure Of P38alpha Bound To Tak-715
pdb|3ZSH|A Chain A, X-Ray Structure Of P38alpha Bound To Scio-469
pdb|3ZSI|A Chain A, X-Ray Structure Of P38alpha Bound To Vx-745
pdb|3ZS5|A Chain A, Structural Basis For Kinase Selectivity Of Three Clinical
P38alpha Inhibitors
Length = 362
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 49/224 (21%), Positives = 101/224 (45%), Gaps = 31/224 (13%)
Query: 83 SVSTATNKFSDANKLGEGGFGPVYKGV-LKKGDEIAVKRL--PGRSGQGLREMKNEASVI 139
++ ++ + + +G G +G V K G +AVK+L P +S + E ++
Sbjct: 18 TIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLL 77
Query: 140 AKVQHKNLVRLLGC-----CIDKDEKILIYEYMPNKSLD--------------FFLFDPT 180
++H+N++ LL +++ + + ++ L+ F ++
Sbjct: 78 KHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQIL 137
Query: 181 KRMLLDWSANYSSR-LKVSNILLDKDINPKISDFGMARICGGNELQANTSRIVGTYGYMS 239
+ + SA+ R LK SN+ +++D KI DFG+AR + V T Y +
Sbjct: 138 RGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLAR-----HTDDEMTGYVATRWYRA 192
Query: 240 PEYAIQGI-FSIKSDVFSFGVLLLEIVSGKKTTGFYRTDSLTLL 282
PE + + ++ D++S G ++ E+++G+ T F TD + L
Sbjct: 193 PEIMLNWMHYNQTVDIWSVGCIMAELLTGR--TLFPGTDHIDQL 234
>pdb|2UVY|A Chain A, Structure Of Pka-pkb Chimera Complexed With Methyl-(4-(9h-
Purin-6-yl)-benzyl)-amine
pdb|2UVZ|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
C-Phenyl-C-(4-( 9h-Purin-6-Yl)-Phenyl)-Methylamine
pdb|2UW0|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 6-(4-(4-(4-
Chloro-Phenyl)-Piperidin-4-Yl)-Phenyl)-9h-Purine
pdb|2UW3|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 5-Methyl-4-
Phenyl-1h-Pyrazole
pdb|2UW5|A Chain A, Structure Of Pka-Pkb Chimera Complexed With (R)-2-(4-
Chloro-Phenyl)-2-(4-1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW6|A Chain A, Structure Of Pka-Pkb Chimera Complexed With (S)-2-(4-
Chloro-Phenyl)-2-(4-1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW8|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 2-(4-Chloro-
Phenyl)-2-Phenyl-Ethylamine
pdb|2VNW|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
(1-(9h-Purin-6- Yl)piperidin-4-Yl)methanamine
pdb|2VNY|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
(1-(9h-Purin-6- Yl)piperidin-4-Yl)amine
pdb|2VO3|A Chain A, Structure Of Pka-Pkb Chimera Complexed With C-(4-(4-
Chlorophenyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Yl)methylamine
pdb|2VO6|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 4-(4-
Chlorobenzyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Ylamine
Length = 351
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 48/199 (24%), Positives = 88/199 (44%), Gaps = 25/199 (12%)
Query: 89 NKFSDANKLGEGGFGPVY-KGVLKKGDEIAVKRLPGRSGQGLREMK---NEASVIAKVQH 144
++F LG G FG V ++ G+ A+K L + L++++ NE ++ V
Sbjct: 42 DQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 101
Query: 145 KNLVRLLGCCIDKDEKILIYEYMPNKSLDFFL------FDPTKR-----MLLDWSANYS- 192
L +L D ++ EY P + L +P R ++L + +S
Sbjct: 102 PFLTKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFXEPHARFYAAQIVLTFEYLHSL 161
Query: 193 ----SRLKVSNILLDKDINPKISDFGMARICGGNELQANTSRIVGTYGYMSPEYAIQGIF 248
LK N+++D+ K++DFG A+ G T + GT Y++PE + +
Sbjct: 162 DLIYRDLKPENLMIDQQGYIKVTDFGFAKRVKGR-----TWXLCGTPEYLAPEIILSKGY 216
Query: 249 SIKSDVFSFGVLLLEIVSG 267
+ D ++ GVL+ E+ +G
Sbjct: 217 NKAVDWWALGVLIYEMAAG 235
>pdb|3K3I|A Chain A, P38alpha Bound To Novel Dgf-Out Compound Pf-00215955
Length = 350
Score = 46.6 bits (109), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 49/224 (21%), Positives = 101/224 (45%), Gaps = 31/224 (13%)
Query: 83 SVSTATNKFSDANKLGEGGFGPVYKGV-LKKGDEIAVKRL--PGRSGQGLREMKNEASVI 139
++ ++ + + +G G +G V K G +AVK+L P +S + E ++
Sbjct: 14 TIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLL 73
Query: 140 AKVQHKNLVRLLGC-----CIDKDEKILIYEYMPNKSLD--------------FFLFDPT 180
++H+N++ LL +++ + + ++ L+ F ++
Sbjct: 74 KHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQIL 133
Query: 181 KRMLLDWSANYSSR-LKVSNILLDKDINPKISDFGMARICGGNELQANTSRIVGTYGYMS 239
+ + SA+ R LK SN+ +++D KI DFG+AR + V T Y +
Sbjct: 134 RGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLAR-----HTDDEMTGYVATRWYRA 188
Query: 240 PEYAIQGI-FSIKSDVFSFGVLLLEIVSGKKTTGFYRTDSLTLL 282
PE + + ++ D++S G ++ E+++G+ T F TD + L
Sbjct: 189 PEIMLNWMHYNQTVDIWSVGCIMAELLTGR--TLFPGTDHIDQL 230
>pdb|3KQ7|A Chain A, Structure Of Human P38alpha With N-[4-Methyl-3-(6-{[2-(1-
Methylpyrrolidin-2-Yl)ethyl]amino}pyridine-3-
Amido)phenyl]- 2-(Morpholin-4-Yl)pyridine-4-Carboxamide
Length = 380
Score = 46.6 bits (109), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 49/224 (21%), Positives = 101/224 (45%), Gaps = 31/224 (13%)
Query: 83 SVSTATNKFSDANKLGEGGFGPVYKGV-LKKGDEIAVKRL--PGRSGQGLREMKNEASVI 139
++ ++ + + +G G +G V K G +AVK+L P +S + E ++
Sbjct: 36 TIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLL 95
Query: 140 AKVQHKNLVRLLGC-----CIDKDEKILIYEYMPNKSLD--------------FFLFDPT 180
++H+N++ LL +++ + + ++ L+ F ++
Sbjct: 96 KHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQIL 155
Query: 181 KRMLLDWSANYSSR-LKVSNILLDKDINPKISDFGMARICGGNELQANTSRIVGTYGYMS 239
+ + SA+ R LK SN+ +++D KI DFG+AR + V T Y +
Sbjct: 156 RGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLAR-----HTDDEMTGYVATRWYRA 210
Query: 240 PEYAIQGI-FSIKSDVFSFGVLLLEIVSGKKTTGFYRTDSLTLL 282
PE + + ++ D++S G ++ E+++G+ T F TD + L
Sbjct: 211 PEIMLNWMHYNQTVDIWSVGCIMAELLTGR--TLFPGTDHIDQL 252
>pdb|3GCU|A Chain A, Human P38 Map Kinase In Complex With Rl48
pdb|3GCU|B Chain B, Human P38 Map Kinase In Complex With Rl48
pdb|3HV4|A Chain A, Human P38 Map Kinase In Complex With Rl51
pdb|3HV4|B Chain B, Human P38 Map Kinase In Complex With Rl51
pdb|3HV5|A Chain A, Human P38 Map Kinase In Complex With Rl24
pdb|3HV5|B Chain B, Human P38 Map Kinase In Complex With Rl24
pdb|3HV6|A Chain A, Human P38 Map Kinase In Complex With Rl39
pdb|3HV7|A Chain A, Human P38 Map Kinase In Complex With Rl38
pdb|3HUC|A Chain A, Human P38 Map Kinase In Complex With Rl40
pdb|3LFA|A Chain A, Human P38 Map Kinase In Complex With Dasatinib
pdb|3QUE|A Chain A, Human P38 Map Kinase In Complex With Skepinone-L
pdb|3QUD|A Chain A, Human P38 Map Kinase In Complex With
2-Amino-Phenylamino-Benzophenone
pdb|3UVP|A Chain A, Human P38 Map Kinase In Complex With A Benzamide
Substituted Benzosuberone
pdb|3UVQ|A Chain A, Human P38 Map Kinase In Complex With A Dibenzosuberone
Derivative
pdb|4EH2|A Chain A, Human P38 Map Kinase In Complex With Np-F1 And Rl87
pdb|4EH3|A Chain A, Human P38 Map Kinase In Complex With Np-F2 And Rl87
pdb|4EH4|A Chain A, Human P38 Map Kinase In Complex With Np-F3 And Rl87
pdb|4EH5|A Chain A, Human P38 Map Kinase In Complex With Np-F4 And Rl87
pdb|4EH6|A Chain A, Human P38 Map Kinase In Complex With Np-F5 And Rl87
pdb|4EH7|A Chain A, Human P38 Map Kinase In Complex With Np-F6 And Rl87
pdb|4EH8|A Chain A, Human P38 Map Kinase In Complex With Np-F7 And Rl87
pdb|4EH9|A Chain A, Human P38 Map Kinase In Complex With Np-F11 And Rl87
pdb|4EHV|A Chain A, Human P38 Map Kinase In Complex With Np-F10 And Rl87
pdb|3UVR|A Chain A, Human P38 Map Kinase In Complex With Km064
pdb|4DLI|A Chain A, Human P38 Map Kinase In Complex With Rl87
pdb|4DLJ|A Chain A, Human P38 Map Kinase In Complex With Rl163
Length = 360
Score = 46.6 bits (109), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 49/224 (21%), Positives = 101/224 (45%), Gaps = 31/224 (13%)
Query: 83 SVSTATNKFSDANKLGEGGFGPVYKGV-LKKGDEIAVKRL--PGRSGQGLREMKNEASVI 139
++ ++ + + +G G +G V K G +AVK+L P +S + E ++
Sbjct: 16 TIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLL 75
Query: 140 AKVQHKNLVRLLGC-----CIDKDEKILIYEYMPNKSLD--------------FFLFDPT 180
++H+N++ LL +++ + + ++ L+ F ++
Sbjct: 76 KHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQIL 135
Query: 181 KRMLLDWSANYSSR-LKVSNILLDKDINPKISDFGMARICGGNELQANTSRIVGTYGYMS 239
+ + SA+ R LK SN+ +++D KI DFG+AR + V T Y +
Sbjct: 136 RGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLAR-----HTDDEMTGYVATRWYRA 190
Query: 240 PEYAIQGI-FSIKSDVFSFGVLLLEIVSGKKTTGFYRTDSLTLL 282
PE + + ++ D++S G ++ E+++G+ T F TD + L
Sbjct: 191 PEIMLNWMHYNQTVDIWSVGCIMAELLTGR--TLFPGTDHIDQL 232
>pdb|3D83|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biphenyl
Amide Inhibitor
pdb|3IPH|A Chain A, Crystal Structure Of P38 In Complex With A Biphenylamide
Inhibitor
Length = 360
Score = 46.6 bits (109), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 50/224 (22%), Positives = 100/224 (44%), Gaps = 31/224 (13%)
Query: 83 SVSTATNKFSDANKLGEGGFGPVYKGV-LKKGDEIAVKRL--PGRSGQGLREMKNEASVI 139
++ ++ + + +G G +G V K G +AVK+L P +S + E ++
Sbjct: 16 TIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLL 75
Query: 140 AKVQHKNLVRLLGC------------------CIDKD-EKILIYEYMPNKSLDFFLFDPT 180
++H+N++ LL + D I+ + + + + F ++
Sbjct: 76 KHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKXQKLTDDHVQFLIYQIL 135
Query: 181 KRMLLDWSANYSSR-LKVSNILLDKDINPKISDFGMARICGGNELQANTSRIVGTYGYMS 239
+ + SA+ R LK SN+ +++D KI DFG+AR + V T Y +
Sbjct: 136 RGLKYIHSADIIHRDLKPSNLAVNEDXELKILDFGLAR-----HTDDEMTGYVATRWYRA 190
Query: 240 PEYAIQGI-FSIKSDVFSFGVLLLEIVSGKKTTGFYRTDSLTLL 282
PE + + ++ D++S G ++ E+++G+ T F TD + L
Sbjct: 191 PEIMLNWMHYNQTVDIWSVGCIMAELLTGR--TLFPGTDHIDQL 232
>pdb|3MA6|A Chain A, Crystal Structure Of Kinase Domain Of Tgcdpk1 In Presence
Of 3brb-Pp1
pdb|3MA6|B Chain B, Crystal Structure Of Kinase Domain Of Tgcdpk1 In Presence
Of 3brb-Pp1
Length = 298
Score = 46.6 bits (109), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 61/220 (27%), Positives = 100/220 (45%), Gaps = 41/220 (18%)
Query: 78 LFSFSSVSTATNKFSDANKLGEGGFGPVYKGVLKK----GDEIAVKRLPGRSGQGLREMK 133
+F S + ++++ LG+G FG V +L K G E AVK + R +++
Sbjct: 21 MFVQHSTAIFSDRYKGQRVLGKGSFGEV---ILCKDKITGQECAVKVISKRQ---VKQKT 74
Query: 134 NEASVIAKVQ------HKNLVRLLGCCIDKDEKILIYE-YMPNKSLD-------FFLFDP 179
++ S++ +VQ H N+++L DK L+ E Y + D F D
Sbjct: 75 DKESLLREVQLLKQLDHPNIMKLYEFFEDKGYFYLVGEVYTGGELFDEIISRKRFSEVDA 134
Query: 180 TK--RMLLDWSANYSSR-------LKVSNILLD---KDINPKISDFGMARICGGNELQAN 227
+ R +L Y + LK N+LL+ KD N +I DFG++ E
Sbjct: 135 ARIIRQVLS-GITYMHKNKIVHRDLKPENLLLESKSKDANIRIIDFGLST---HFEASKK 190
Query: 228 TSRIVGTYGYMSPEYAIQGIFSIKSDVFSFGVLLLEIVSG 267
+GT Y++PE + G + K DV+S GV+L ++SG
Sbjct: 191 MKDKIGTAYYIAPE-VLHGTYDEKCDVWSTGVILYILLSG 229
>pdb|3K3J|A Chain A, P38alpha Bound To Novel Dfg-Out Compound Pf-00416121
Length = 362
Score = 46.6 bits (109), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 49/224 (21%), Positives = 101/224 (45%), Gaps = 31/224 (13%)
Query: 83 SVSTATNKFSDANKLGEGGFGPVYKGV-LKKGDEIAVKRL--PGRSGQGLREMKNEASVI 139
++ ++ + + +G G +G V K G +AVK+L P +S + E ++
Sbjct: 18 TIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLL 77
Query: 140 AKVQHKNLVRLLGC-----CIDKDEKILIYEYMPNKSLD--------------FFLFDPT 180
++H+N++ LL +++ + + ++ L+ F ++
Sbjct: 78 KHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQIL 137
Query: 181 KRMLLDWSANYSSR-LKVSNILLDKDINPKISDFGMARICGGNELQANTSRIVGTYGYMS 239
+ + SA+ R LK SN+ +++D KI DFG+AR + V T Y +
Sbjct: 138 RGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLAR-----HTDDEMTGYVATRWYRA 192
Query: 240 PEYAIQGI-FSIKSDVFSFGVLLLEIVSGKKTTGFYRTDSLTLL 282
PE + + ++ D++S G ++ E+++G+ T F TD + L
Sbjct: 193 PEIMLNWMHYNQTVDIWSVGCIMAELLTGR--TLFPGTDHIDQL 234
>pdb|2BAL|A Chain A, P38alpha Map Kinase Bound To Pyrazoloamine
pdb|4AA5|A Chain A, P38alpha Map Kinase Bound To Cmpd 33
Length = 365
Score = 46.6 bits (109), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 49/224 (21%), Positives = 101/224 (45%), Gaps = 31/224 (13%)
Query: 83 SVSTATNKFSDANKLGEGGFGPVYKGV-LKKGDEIAVKRL--PGRSGQGLREMKNEASVI 139
++ ++ + + +G G +G V K G +AVK+L P +S + E ++
Sbjct: 21 TIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLL 80
Query: 140 AKVQHKNLVRLLGC-----CIDKDEKILIYEYMPNKSLD--------------FFLFDPT 180
++H+N++ LL +++ + + ++ L+ F ++
Sbjct: 81 KHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQIL 140
Query: 181 KRMLLDWSANYSSR-LKVSNILLDKDINPKISDFGMARICGGNELQANTSRIVGTYGYMS 239
+ + SA+ R LK SN+ +++D KI DFG+AR + V T Y +
Sbjct: 141 RGLKYIHSADIIHRDLKPSNLAVNEDXELKILDFGLAR-----HTDDEMTGYVATRWYRA 195
Query: 240 PEYAIQGI-FSIKSDVFSFGVLLLEIVSGKKTTGFYRTDSLTLL 282
PE + + ++ D++S G ++ E+++G+ T F TD + L
Sbjct: 196 PEIMLNWMHYNQTVDIWSVGCIMAELLTGR--TLFPGTDHIDQL 237
>pdb|1OZ1|A Chain A, P38 Mitogen-Activated Kinase In Complex With 4-Azaindole
Inhibitor
Length = 372
Score = 46.6 bits (109), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 49/224 (21%), Positives = 101/224 (45%), Gaps = 31/224 (13%)
Query: 83 SVSTATNKFSDANKLGEGGFGPVYKGV-LKKGDEIAVKRL--PGRSGQGLREMKNEASVI 139
++ ++ + + +G G +G V K G +AVK+L P +S + E ++
Sbjct: 28 TIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLL 87
Query: 140 AKVQHKNLVRLLGC-----CIDKDEKILIYEYMPNKSLD--------------FFLFDPT 180
++H+N++ LL +++ + + ++ L+ F ++
Sbjct: 88 KHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQIL 147
Query: 181 KRMLLDWSANYSSR-LKVSNILLDKDINPKISDFGMARICGGNELQANTSRIVGTYGYMS 239
+ + SA+ R LK SN+ +++D KI DFG+AR + V T Y +
Sbjct: 148 RGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLAR-----HTDDEMTGYVATRWYRA 202
Query: 240 PEYAIQGI-FSIKSDVFSFGVLLLEIVSGKKTTGFYRTDSLTLL 282
PE + + ++ D++S G ++ E+++G+ T F TD + L
Sbjct: 203 PEIMLNWMHYNQTVDIWSVGCIMAELLTGR--TLFPGTDHIDQL 244
>pdb|2GFS|A Chain A, P38 Kinase Crystal Structure In Complex With Ro3201195
pdb|3FKL|A Chain A, P38 Kinase Crystal Structure In Complex With Ro9552
pdb|3FKN|A Chain A, P38 Kinase Crystal Structure In Complex With Ro7125
pdb|3FL4|A Chain A, P38 Kinase Crystal Structure In Complex With Ro5634
pdb|3FLQ|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-((S)-2-Methanesulfonyl-1-Methyl-
Ethylamino)-8-Methyl-8h-Pyrido[2,3-D]pyrimidin
pdb|3FLS|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-((R)-2-Methanesulfonyl-1-Methyl-
Ethylamino)-8-Methyl-8h-Pyrido[2,3-D]pyrimidin-7-One
pdb|3FLW|A Chain A, P38 Kinase Crystal Structure In Complex With Pamapimod
pdb|3FLY|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-Isopropylamino-8-Methyl-8h-Pyrido[2,
3- D]pyrimidin-7-One
pdb|3FLZ|A Chain A, P38 Kinase Crystal Structure In Complex With
8-Methyl-6-Phenoxy-2-
(Tetrahydro-Pyran-4-Ylamino)-8h-Pyrido[2,
3-D]pyrimidin-7-One
pdb|3FMH|A Chain A, P38 Kinase Crystal Structure In Complex With
6-(2,4-Difluoro-Phenoxy)-
8-Methyl-2-((R)-1-Methyl-2-Tetrazol-2-Yl-Ethylamino)-8h-
Pyrido[2,3- D]pyrimidin-7-One
pdb|3FMJ|A Chain A, P38 Kinase Crystal Structure In Complex With
4-(5-Methyl-3-Phenyl- Isoxazol-4-Yl)-Pyrimidin-2-Ylamine
pdb|3FMK|A Chain A, P38 Kinase Crystal Structure In Complex With
6-(2,4-Difluoro-Phenoxy)-
8-Methyl-2-((S)-1-Methyl-2-Tetrazol-2-Yl-Ethylamino)-8h-
Pyrido[2,3- D]pyrimidin-7-One
pdb|3FML|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6224
pdb|3FMM|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6226
pdb|3FMN|A Chain A, P38 Kinase Crystal Structure In Complex With Ro2530
pdb|3FSF|A Chain A, P38 Kinase Crystal Structure In Complex With 3-(2,6-
Dichloro-Phenyl)-7-[4-(2-Diethylamino-Ethoxy)-
Phenylamino]-
1-Methyl-3,4-Dihydro-1h-Pyrimido[4,5-D]pyrimidin-2-One
pdb|3FSK|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6257
Length = 372
Score = 46.6 bits (109), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 49/224 (21%), Positives = 101/224 (45%), Gaps = 31/224 (13%)
Query: 83 SVSTATNKFSDANKLGEGGFGPVYKGV-LKKGDEIAVKRL--PGRSGQGLREMKNEASVI 139
++ ++ + + +G G +G V K G +AVK+L P +S + E ++
Sbjct: 28 TIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLL 87
Query: 140 AKVQHKNLVRLLGC-----CIDKDEKILIYEYMPNKSLD--------------FFLFDPT 180
++H+N++ LL +++ + + ++ L+ F ++
Sbjct: 88 KHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQIL 147
Query: 181 KRMLLDWSANYSSR-LKVSNILLDKDINPKISDFGMARICGGNELQANTSRIVGTYGYMS 239
+ + SA+ R LK SN+ +++D KI DFG+AR + V T Y +
Sbjct: 148 RGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLAR-----HTDDEMTGYVATRWYRA 202
Query: 240 PEYAIQGI-FSIKSDVFSFGVLLLEIVSGKKTTGFYRTDSLTLL 282
PE + + ++ D++S G ++ E+++G+ T F TD + L
Sbjct: 203 PEIMLNWMHYNQTVDIWSVGCIMAELLTGR--TLFPGTDHIDQL 244
>pdb|3FI4|A Chain A, P38 Kinase Crystal Structure In Complex With Ro4499
pdb|3FKO|A Chain A, P38 Kinase Crystal Structure In Complex With Ro3668
pdb|3FLN|C Chain C, P38 Kinase Crystal Structure In Complex With R1487
Length = 372
Score = 46.6 bits (109), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 49/224 (21%), Positives = 101/224 (45%), Gaps = 31/224 (13%)
Query: 83 SVSTATNKFSDANKLGEGGFGPVYKGV-LKKGDEIAVKRL--PGRSGQGLREMKNEASVI 139
++ ++ + + +G G +G V K G +AVK+L P +S + E ++
Sbjct: 28 TIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSKPFQSIIHAKRTYRELRLL 87
Query: 140 AKVQHKNLVRLLGC-----CIDKDEKILIYEYMPNKSLD--------------FFLFDPT 180
++H+N++ LL +++ + + ++ L+ F ++
Sbjct: 88 KHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQIL 147
Query: 181 KRMLLDWSANYSSR-LKVSNILLDKDINPKISDFGMARICGGNELQANTSRIVGTYGYMS 239
+ + SA+ R LK SN+ +++D KI DFG+AR + V T Y +
Sbjct: 148 RGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLAR-----HTDDEMTGYVATRWYRA 202
Query: 240 PEYAIQGI-FSIKSDVFSFGVLLLEIVSGKKTTGFYRTDSLTLL 282
PE + + ++ D++S G ++ E+++G+ T F TD + L
Sbjct: 203 PEIMLNWMHYNQTVDIWSVGCIMAELLTGR--TLFPGTDHIDQL 244
>pdb|1Q24|A Chain A, Pka Double Mutant Model Of Pkb In Complex With Mgatp
pdb|1Q62|A Chain A, Pka Double Mutant Model Of Pkb
Length = 350
Score = 46.6 bits (109), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 48/199 (24%), Positives = 89/199 (44%), Gaps = 25/199 (12%)
Query: 89 NKFSDANKLGEGGFGPVY-KGVLKKGDEIAVKRLPGRSGQGLREMK---NEASVIAKVQH 144
++F LG G FG V ++ G+ A+K L + L++++ NE ++ V
Sbjct: 41 DQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 100
Query: 145 KNLVRLLGCCIDKDEKILIYEYMPNKSLDFFL------FDPTKR-----MLLDWSANYS- 192
LV+L D ++ EY P + L +P R ++L + +S
Sbjct: 101 PFLVKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSL 160
Query: 193 ----SRLKVSNILLDKDINPKISDFGMARICGGNELQANTSRIVGTYGYMSPEYAIQGIF 248
LK N+++D+ +++DFG A+ G T + GT Y++PE + +
Sbjct: 161 DLIYRDLKPENLMIDQQGYIQVTDFGFAKRVKGR-----TWXLCGTPEYLAPEIILSKGY 215
Query: 249 SIKSDVFSFGVLLLEIVSG 267
+ D ++ GVL+ E+ +G
Sbjct: 216 NKAVDWWALGVLIYEMAAG 234
>pdb|3MPT|A Chain A, Crystal Structure Of P38 Kinase In Complex With A
Pyrrole-2- Carboxamide Inhibitor
Length = 371
Score = 46.6 bits (109), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 49/224 (21%), Positives = 101/224 (45%), Gaps = 31/224 (13%)
Query: 83 SVSTATNKFSDANKLGEGGFGPVYKGV-LKKGDEIAVKRL--PGRSGQGLREMKNEASVI 139
++ ++ + + +G G +G V K G +AVK+L P +S + E ++
Sbjct: 27 TIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLL 86
Query: 140 AKVQHKNLVRLLGC-----CIDKDEKILIYEYMPNKSLD--------------FFLFDPT 180
++H+N++ LL +++ + + ++ L+ F ++
Sbjct: 87 KHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQIL 146
Query: 181 KRMLLDWSANYSSR-LKVSNILLDKDINPKISDFGMARICGGNELQANTSRIVGTYGYMS 239
+ + SA+ R LK SN+ +++D KI DFG+AR + V T Y +
Sbjct: 147 RGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLAR-----HTDDEMTGYVATRWYRA 201
Query: 240 PEYAIQGI-FSIKSDVFSFGVLLLEIVSGKKTTGFYRTDSLTLL 282
PE + + ++ D++S G ++ E+++G+ T F TD + L
Sbjct: 202 PEIMLNWMHYNQTVDIWSVGCIMAELLTGR--TLFPGTDHIDQL 243
>pdb|1BL6|A Chain A, The Complex Structure Of The Map Kinase P38SB216995
pdb|1BL7|A Chain A, The Complex Structure Of The Map Kinase P38SB220025
pdb|2EWA|A Chain A, Dual Binding Mode Of Pyridinylimidazole To Map Kinase P38
pdb|1A9U|A Chain A, The Complex Structure Of The Map Kinase P38SB203580
pdb|3HA8|A Chain A, The Complex Structure Of The Map Kinase P38COMPOUND 14B
Length = 379
Score = 46.6 bits (109), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 49/224 (21%), Positives = 101/224 (45%), Gaps = 31/224 (13%)
Query: 83 SVSTATNKFSDANKLGEGGFGPVYKGV-LKKGDEIAVKRL--PGRSGQGLREMKNEASVI 139
++ ++ + + +G G +G V K G +AVK+L P +S + E ++
Sbjct: 35 TIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLL 94
Query: 140 AKVQHKNLVRLLGC-----CIDKDEKILIYEYMPNKSLD--------------FFLFDPT 180
++H+N++ LL +++ + + ++ L+ F ++
Sbjct: 95 KHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQIL 154
Query: 181 KRMLLDWSANYSSR-LKVSNILLDKDINPKISDFGMARICGGNELQANTSRIVGTYGYMS 239
+ + SA+ R LK SN+ +++D KI DFG+AR + V T Y +
Sbjct: 155 RGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLAR-----HTDDEMTGYVATRWYRA 209
Query: 240 PEYAIQGI-FSIKSDVFSFGVLLLEIVSGKKTTGFYRTDSLTLL 282
PE + + ++ D++S G ++ E+++G+ T F TD + L
Sbjct: 210 PEIMLNWMHYNQTVDIWSVGCIMAELLTGR--TLFPGTDHIDQL 251
>pdb|3DT1|A Chain A, P38 Complexed With A Quinazoline Inhibitor
Length = 383
Score = 46.6 bits (109), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 49/224 (21%), Positives = 101/224 (45%), Gaps = 31/224 (13%)
Query: 83 SVSTATNKFSDANKLGEGGFGPVYKGV-LKKGDEIAVKRL--PGRSGQGLREMKNEASVI 139
++ ++ + + +G G +G V K G +AVK+L P +S + E ++
Sbjct: 39 TIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLL 98
Query: 140 AKVQHKNLVRLLGC-----CIDKDEKILIYEYMPNKSLD--------------FFLFDPT 180
++H+N++ LL +++ + + ++ L+ F ++
Sbjct: 99 KHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQIL 158
Query: 181 KRMLLDWSANYSSR-LKVSNILLDKDINPKISDFGMARICGGNELQANTSRIVGTYGYMS 239
+ + SA+ R LK SN+ +++D KI DFG+AR + V T Y +
Sbjct: 159 RGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLAR-----HTDDEMTGYVATRWYRA 213
Query: 240 PEYAIQGI-FSIKSDVFSFGVLLLEIVSGKKTTGFYRTDSLTLL 282
PE + + ++ D++S G ++ E+++G+ T F TD + L
Sbjct: 214 PEIMLNWMHYNQTVDIWSVGCIMAELLTGR--TLFPGTDHIDQL 255
>pdb|3AMA|A Chain A, Protein Kinase A Sixfold Mutant Model Of Aurora B With
Inhibitor Jnj- 7706621
pdb|3AMB|A Chain A, Protein Kinase A Sixfold Mutant Model Of Aurora B With
Inhibitor Vx- 680
Length = 351
Score = 46.6 bits (109), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 51/199 (25%), Positives = 88/199 (44%), Gaps = 25/199 (12%)
Query: 89 NKFSDANKLGEGGFGPVYKGVLKK-GDEIAVKRLPGRSGQGLREMK---NEASVIAKVQH 144
++F LG G FG V K+ G+ A+K L + L++++ NE + V
Sbjct: 42 DQFERIRTLGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRIQQAVNF 101
Query: 145 KNLVRLLGCCIDKDEKILIYEYMPNKSLDFFL------FDPTKR-----MLLDWSANYS- 192
LV+L D ++ EY P + L +P R ++L + +S
Sbjct: 102 PFLVKLEFSFKDNSNLYMVLEYAPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSL 161
Query: 193 ----SRLKVSNILLDKDINPKISDFGMARICGGNELQANTSRIVGTYGYMSPEYAIQGIF 248
LK N+L+D+ K++DFG A+ G T + GT Y++PE + +
Sbjct: 162 DLIYRDLKPENLLIDQQGYIKVADFGFAKRVKGR-----TWXLCGTPEYLAPEIILSKGY 216
Query: 249 SIKSDVFSFGVLLLEIVSG 267
+ D ++ GVL+ E+ +G
Sbjct: 217 NKAVDWWALGVLIYEMAAG 235
>pdb|3HX4|A Chain A, Crystal Structure Of Cdpk1 Of Toxoplasma Gondii,
Tgme49_101440, In Presence Of Calcium
Length = 508
Score = 46.6 bits (109), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 61/220 (27%), Positives = 100/220 (45%), Gaps = 41/220 (18%)
Query: 78 LFSFSSVSTATNKFSDANKLGEGGFGPVYKGVLKK----GDEIAVKRLPGRSGQGLREMK 133
+F S + ++++ LG+G FG V +L K G E AVK + R +++
Sbjct: 39 MFVQHSTAIFSDRYKGQRVLGKGSFGEV---ILCKDKITGQECAVKVISKRQ---VKQKT 92
Query: 134 NEASVIAKVQ------HKNLVRLLGCCIDKDEKILIYE-YMPNKSLD-------FFLFDP 179
++ S++ +VQ H N+++L DK L+ E Y + D F D
Sbjct: 93 DKESLLREVQLLKQLDHPNIMKLYEFFEDKGYFYLVGEVYTGGELFDEIISRKRFSEVDA 152
Query: 180 TK--RMLLDWSANYSSR-------LKVSNILLD---KDINPKISDFGMARICGGNELQAN 227
+ R +L Y + LK N+LL+ KD N +I DFG++ E
Sbjct: 153 ARIIRQVLS-GITYMHKNKIVHRDLKPENLLLESKSKDANIRIIDFGLSTHF---EASKK 208
Query: 228 TSRIVGTYGYMSPEYAIQGIFSIKSDVFSFGVLLLEIVSG 267
+GT Y++PE + G + K DV+S GV+L ++SG
Sbjct: 209 MKDKIGTAYYIAPE-VLHGTYDEKCDVWSTGVILYILLSG 247
>pdb|3GP0|A Chain A, Crystal Structure Of Human Mitogen Activated Protein
Kinase 11 (p38 Beta) In Complex With Nilotinib
Length = 348
Score = 46.6 bits (109), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 49/212 (23%), Positives = 93/212 (43%), Gaps = 33/212 (15%)
Query: 83 SVSTATNKFSDANKLGEGGFGPV---YKGVLKKGDEIAVKRL--PGRSGQGLREMKNEAS 137
+V + +G G +G V Y L++ ++AVK+L P +S R E
Sbjct: 14 TVWEVPQRLQGLRPVGSGAYGSVCSAYDARLRQ--KVAVKKLSRPFQSLIHARRTYRELR 71
Query: 138 VIAKVQHKNLVRLLGCCI------DKDEKILIYEYM-------------PNKSLDFFLFD 178
++ ++H+N++ LL D E L+ M ++ + F ++
Sbjct: 72 LLKHLKHENVIGLLDVFTPATSIEDFSEVYLVTTLMGADLNNIVKCQALSDEHVQFLVYQ 131
Query: 179 PTKRMLLDWSANYSSR-LKVSNILLDKDINPKISDFGMARICGGNELQANTSRIVGTYGY 237
+ + SA R LK SN+ +++D +I DFG+AR + + V T Y
Sbjct: 132 LLRGLKYIHSAGIIHRDLKPSNVAVNEDCELRILDFGLAR-----QADEEMTGYVATRWY 186
Query: 238 MSPEYAIQGI-FSIKSDVFSFGVLLLEIVSGK 268
+PE + + ++ D++S G ++ E++ GK
Sbjct: 187 RAPEIMLNWMHYNQTVDIWSVGCIMAELLQGK 218
>pdb|3KU2|A Chain A, Crystal Structure Of Inactivated Form Of Cdpk1 From
Toxoplasma Gondii, Tgme49.101440
Length = 507
Score = 46.6 bits (109), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 61/220 (27%), Positives = 100/220 (45%), Gaps = 41/220 (18%)
Query: 78 LFSFSSVSTATNKFSDANKLGEGGFGPVYKGVLKK----GDEIAVKRLPGRSGQGLREMK 133
+F S + ++++ LG+G FG V +L K G E AVK + R +++
Sbjct: 38 MFVQHSTAIFSDRYKGQRVLGKGSFGEV---ILCKDKITGQECAVKVISKRQ---VKQKT 91
Query: 134 NEASVIAKVQ------HKNLVRLLGCCIDKDEKILIYE-YMPNKSLD-------FFLFDP 179
++ S++ +VQ H N+++L DK L+ E Y + D F D
Sbjct: 92 DKESLLREVQLLKQLDHPNIMKLYEFFEDKGYFYLVGEVYTGGELFDEIISRKRFSEVDA 151
Query: 180 TK--RMLLDWSANYSSR-------LKVSNILLD---KDINPKISDFGMARICGGNELQAN 227
+ R +L Y + LK N+LL+ KD N +I DFG++ E
Sbjct: 152 ARIIRQVLS-GITYMHKNKIVHRDLKPENLLLESKSKDANIRIIDFGLSTHF---EASKK 207
Query: 228 TSRIVGTYGYMSPEYAIQGIFSIKSDVFSFGVLLLEIVSG 267
+GT Y++PE + G + K DV+S GV+L ++SG
Sbjct: 208 MKDKIGTAYYIAPE-VLHGTYDEKCDVWSTGVILYILLSG 246
>pdb|3E92|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biaryl
Amide Inhibitor
pdb|3E93|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biaryl
Amide Inhibitor
Length = 371
Score = 46.2 bits (108), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 49/224 (21%), Positives = 101/224 (45%), Gaps = 31/224 (13%)
Query: 83 SVSTATNKFSDANKLGEGGFGPVYKGV-LKKGDEIAVKRL--PGRSGQGLREMKNEASVI 139
++ ++ + + +G G +G V K G +AVK+L P +S + E ++
Sbjct: 27 TIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLL 86
Query: 140 AKVQHKNLVRLLGC-----CIDKDEKILIYEYMPNKSLD--------------FFLFDPT 180
++H+N++ LL +++ + + ++ L+ F ++
Sbjct: 87 KHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQIL 146
Query: 181 KRMLLDWSANYSSR-LKVSNILLDKDINPKISDFGMARICGGNELQANTSRIVGTYGYMS 239
+ + SA+ R LK SN+ +++D KI DFG+AR + V T Y +
Sbjct: 147 RGLKYIHSADIIHRDLKPSNLAVNEDXELKILDFGLAR-----HTDDEMTGYVATRWYRA 201
Query: 240 PEYAIQGI-FSIKSDVFSFGVLLLEIVSGKKTTGFYRTDSLTLL 282
PE + + ++ D++S G ++ E+++G+ T F TD + L
Sbjct: 202 PEIMLNWMHYNQTVDIWSVGCIMAELLTGR--TLFPGTDHIDQL 243
>pdb|3I79|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1)
pdb|3I7B|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor Nm-Pp1
pdb|3N51|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor
Rm-1-95
pdb|3SX9|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-132
pdb|3SXF|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-89
pdb|3T3U|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-130
pdb|3T3V|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-87
pdb|3UPX|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1300
pdb|3UPZ|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumpless Bki Analog Uw1243
pdb|3V51|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Rm-1-176
pdb|3V5P|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1288
pdb|3V5T|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1299
Length = 484
Score = 46.2 bits (108), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 61/220 (27%), Positives = 100/220 (45%), Gaps = 41/220 (18%)
Query: 78 LFSFSSVSTATNKFSDANKLGEGGFGPVYKGVLKK----GDEIAVKRLPGRSGQGLREMK 133
+F S + ++++ LG+G FG V +L K G E AVK + R +++
Sbjct: 15 MFVQHSTAIFSDRYKGQRVLGKGSFGEV---ILCKDKITGQECAVKVISKRQ---VKQKT 68
Query: 134 NEASVIAKVQ------HKNLVRLLGCCIDKDEKILIYE-YMPNKSLD-------FFLFDP 179
++ S++ +VQ H N+++L DK L+ E Y + D F D
Sbjct: 69 DKESLLREVQLLKQLDHPNIMKLYEFFEDKGYFYLVGEVYTGGELFDEIISRKRFSEVDA 128
Query: 180 TK--RMLLDWSANYSSR-------LKVSNILLD---KDINPKISDFGMARICGGNELQAN 227
+ R +L Y + LK N+LL+ KD N +I DFG++ E
Sbjct: 129 ARIIRQVLS-GITYMHKNKIVHRDLKPENLLLESKSKDANIRIIDFGLSTHF---EASKK 184
Query: 228 TSRIVGTYGYMSPEYAIQGIFSIKSDVFSFGVLLLEIVSG 267
+GT Y++PE + G + K DV+S GV+L ++SG
Sbjct: 185 MKDKIGTAYYIAPE-VLHGTYDEKCDVWSTGVILYILLSG 223
>pdb|2HAK|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|C Chain C, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|D Chain D, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|E Chain E, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|F Chain F, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|G Chain G, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|H Chain H, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
Length = 328
Score = 46.2 bits (108), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 56/219 (25%), Positives = 93/219 (42%), Gaps = 43/219 (19%)
Query: 82 SSVSTATNK------FSDANKLGEGGFGPV--YKGVLKKGDEIAVKRLPGR--SGQGLRE 131
+S+++AT++ + +G+G F V + VL G E+AVK + + L++
Sbjct: 2 NSITSATDEQPHIGNYRLQKTIGKGNFAKVKLARHVLT-GREVAVKIIDKTQLNPTSLQK 60
Query: 132 MKNEASVIAKVQHKNLVRLLGCCIDKDEKILIYEYMPNKSLDFFLFDPTKRMLLDWSANY 191
+ E ++ + H N+V+L + L+ EY + +L + + A +
Sbjct: 61 LFREVRIMKILNHPNIVKLFEVIETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARAKF 120
Query: 192 SS----------------RLKVSNILLDKDINPKISDFGMA-RICGGNELQANTSRIVGT 234
LK N+LLD D+N KI+DFG + GN+L
Sbjct: 121 RQIVSAVQYCHQKYIVHRDLKAENLLLDGDMNIKIADFGFSNEFTVGNKLDTFCG----- 175
Query: 235 YGYMSPEYAIQGIFSIKS------DVFSFGVLLLEIVSG 267
SP YA +F K DV+S GV+L +VSG
Sbjct: 176 ----SPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSG 210
>pdb|3ALN|A Chain A, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALN|B Chain B, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALN|C Chain C, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALO|A Chain A, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Ternary Complex With Amp-Pnp And P38 Peptide
pdb|3VUT|A Chain A, Crystal Structures Of Non-Phosphorylated Map2k4
pdb|3VUT|B Chain B, Crystal Structures Of Non-Phosphorylated Map2k4
Length = 327
Score = 46.2 bits (108), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 39/151 (25%), Positives = 67/151 (44%), Gaps = 26/151 (17%)
Query: 195 LKVSNILLDKDINPKISDFGMARICGGNELQANTSRIVGTYGYMSPEY----AIQGIFSI 250
+K SNILLD+ N K+ DFG I G +R G YM+PE A + + +
Sbjct: 152 IKPSNILLDRSGNIKLCDFG---ISGQLVDSIAKTRDAGCRPYMAPERIDPSASRQGYDV 208
Query: 251 KSDVFSFGVLLLEIVSGKKTTGFYRTDSLTLLGYAWDLWTS--NRTLELI--DPILEDEY 306
+SDV+S G+ L E+ +G+ + + W S ++ +++ DP
Sbjct: 209 RSDVWSLGITLYELATGR---------------FPYPKWNSVFDQLTQVVKGDPPQLSNS 253
Query: 307 SSKHMLLRYVNIALLCVQESADDRPTMNEVV 337
+ ++N LC+ + RP E++
Sbjct: 254 EEREFSPSFINFVNLCLTKDESKRPKYKELL 284
>pdb|4EWQ|A Chain A, Human P38 Alpha Mapk In Complex With A Pyridazine Based
Inhibitor
Length = 383
Score = 46.2 bits (108), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 50/224 (22%), Positives = 103/224 (45%), Gaps = 31/224 (13%)
Query: 83 SVSTATNKFSDANKLGEGGFGPVYKGV-LKKGDEIAVKRL--PGRSGQGLREMKNEASVI 139
++ ++ + + +G G +G V K G +AVK+L P +S + E ++
Sbjct: 39 TIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLL 98
Query: 140 AKVQHKNLVRLLGC-----CIDKDEKILIYEYMPNKSLD--------------FFLFDPT 180
++H+N++ LL +++ + + ++ L+ F ++
Sbjct: 99 KHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQIL 158
Query: 181 KRMLLDWSANYSSR-LKVSNILLDKDINPKISDFGMARICGGNELQANTSRIVGTYGYMS 239
+ + SA+ R LK SN+ +++D KI DFG+AR +E+ V T Y +
Sbjct: 159 RGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLAR-HTDDEMXG----YVATRWYRA 213
Query: 240 PEYAIQGI-FSIKSDVFSFGVLLLEIVSGKKTTGFYRTDSLTLL 282
PE + + ++ D++S G ++ E+++G+ T F TD + L
Sbjct: 214 PEIMLNWMHYNQTVDIWSVGCIMAELLTGR--TLFPGTDHIDQL 255
>pdb|1ZMV|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
K82r Mutant
pdb|1ZMV|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
K82r Mutant
Length = 327
Score = 46.2 bits (108), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 51/198 (25%), Positives = 83/198 (41%), Gaps = 37/198 (18%)
Query: 97 LGEGGFGPV--YKGVLKKGDEIAVKRLPGR--SGQGLREMKNEASVIAKVQHKNLVRLLG 152
+G+G F V + +L G E+AV+ + + L+++ E ++ + H N+V+L
Sbjct: 22 IGKGNFAKVKLARHILT-GKEVAVRIIDKTQLNSSSLQKLFREVRIMKVLNHPNIVKLFE 80
Query: 153 CCIDKDEKILIYEYMPNKSLDFFLFDPTKRMLLDWSANYSS----------------RLK 196
+ L+ EY + +L + + A + LK
Sbjct: 81 VIETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARAKFRQIVSAVQYCHQKFIVHRDLK 140
Query: 197 VSNILLDKDINPKISDFGMA-RICGGNELQANTSRIVGTYGYMSPEYAIQGIFSIKS--- 252
N+LLD D+N KI+DFG + GN+L SP YA +F K
Sbjct: 141 AENLLLDADMNIKIADFGFSNEFTFGNKLDTFCG---------SPPYAAPELFQGKKYDG 191
Query: 253 ---DVFSFGVLLLEIVSG 267
DV+S GV+L +VSG
Sbjct: 192 PEVDVWSLGVILYTLVSG 209
>pdb|3PZE|A Chain A, Jnk1 In Complex With Inhibitor
Length = 358
Score = 46.2 bits (108), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 51/210 (24%), Positives = 92/210 (43%), Gaps = 29/210 (13%)
Query: 83 SVSTATNKFSDANKLGEGGFGPV---YKGVLKKGDEIAVKRL--PGRSGQGLREMKNEAS 137
S T ++ + +G G G V Y +L++ +A+K+L P ++ + E
Sbjct: 12 STFTVLKRYQNLKPIGSGAQGIVCAAYDAILERN--VAIKKLSRPFQNQTHAKRAYRELV 69
Query: 138 VIAKVQHKNLVRLLGC------------------CIDKDEKILIYEYMPNKSLDFFLFDP 179
++ V HKN++ LL +D + +I + ++ + + L+
Sbjct: 70 LMKCVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLCQVIQMELDHERMSYLLYQM 129
Query: 180 TKRMLLDWSANYSSR-LKVSNILLDKDINPKISDFGMARICGGNELQANTSRIVGTYGYM 238
+ SA R LK SNI++ D KI DFG+AR G + + T +V Y Y
Sbjct: 130 LCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMM--TPYVVTRY-YR 186
Query: 239 SPEYAIQGIFSIKSDVFSFGVLLLEIVSGK 268
+PE + + D++S G ++ E+V K
Sbjct: 187 APEVILGMGYKENVDLWSVGCIMGEMVCHK 216
>pdb|2VO0|A Chain A, Structure Of Pka-Pkb Chimera Complexed With C-(4-(4-
Chlorophenyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Yl)methylamine
Length = 351
Score = 46.2 bits (108), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 48/199 (24%), Positives = 88/199 (44%), Gaps = 25/199 (12%)
Query: 89 NKFSDANKLGEGGFGPVY-KGVLKKGDEIAVKRLPGRSGQGLREMK---NEASVIAKVQH 144
++F LG G FG V ++ G+ A+K L + L++++ NE ++ V
Sbjct: 42 DQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 101
Query: 145 KNLVRLLGCCIDKDEKILIYEYMPNKSLDFFL------FDPTKR-----MLLDWSANYS- 192
L +L D ++ EY P + L +P R ++L + +S
Sbjct: 102 PFLTKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSL 161
Query: 193 ----SRLKVSNILLDKDINPKISDFGMARICGGNELQANTSRIVGTYGYMSPEYAIQGIF 248
LK N+++D+ K++DFG A+ G T + GT Y++PE + +
Sbjct: 162 DLIYRDLKPENLMIDQQGYIKVTDFGFAKRVKGR-----TWXLCGTPEYLAPEIILSKGY 216
Query: 249 SIKSDVFSFGVLLLEIVSG 267
+ D ++ GVL+ E+ +G
Sbjct: 217 NKAVDWWALGVLIYEMAAG 235
>pdb|2Y94|A Chain A, Structure Of An Active Form Of Mammalian Ampk
Length = 476
Score = 46.2 bits (108), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 49/195 (25%), Positives = 88/195 (45%), Gaps = 24/195 (12%)
Query: 94 ANKLGEGGFGPVYKGVLK-KGDEIAVK---RLPGRSGQGLREMKNEASVIAKVQHKNLVR 149
+ LG G FG V G + G ++AVK R RS + +++ E + +H ++++
Sbjct: 21 GDTLGVGTFGKVKVGKHELTGHKVAVKILNRQKIRSLDVVGKIRREIQNLKLFRHPHIIK 80
Query: 150 LLGCCIDKDEKILIYEYMPNKSL-DFF-----LFDPTKRMLLDW---SANYSSR------ 194
L + ++ EY+ L D+ L + R L +Y R
Sbjct: 81 LYQVISTPSDIFMVMEYVSGGELFDYICKNGRLDEKESRRLFQQILSGVDYCHRHMVVHR 140
Query: 195 -LKVSNILLDKDINPKISDFGMARICGGNELQANTSRIVGTYGYMSPEYAIQGIFS-IKS 252
LK N+LLD +N KI+DFG++ + E + G+ Y +PE +++ +
Sbjct: 141 DLKPENVLLDAHMNAKIADFGLSNMMSDGEFLRXS---CGSPNYAAPEVISGRLYAGPEV 197
Query: 253 DVFSFGVLLLEIVSG 267
D++S GV+L ++ G
Sbjct: 198 DIWSSGVILYALLCG 212
>pdb|3OZ6|A Chain A, Crystal Structure Of Mapk From Cryptosporidium Parvum,
Cgd2_1960
pdb|3OZ6|B Chain B, Crystal Structure Of Mapk From Cryptosporidium Parvum,
Cgd2_1960
Length = 388
Score = 46.2 bits (108), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 53/219 (24%), Positives = 100/219 (45%), Gaps = 40/219 (18%)
Query: 90 KFSDANKLGEGGFGPVYKGVLKK-GDEIAVKRL--PGRSGQGLREMKNEASVIAKVQ-HK 145
K+ KLG+G +G V+K + ++ G+ +AVK++ ++ + E ++ ++ H+
Sbjct: 10 KYELVKKLGKGAYGIVWKSIDRRTGEVVAVKKIFDAFQNSTDAQRTFREIMILTELSGHE 69
Query: 146 NLVRLLGCC-IDKDEKI-LIYEYMP---NKSLDFFLFDPTKRMLLDW----------SAN 190
N+V LL D D + L+++YM + + + +P + + + S
Sbjct: 70 NIVNLLNVLRADNDRDVYLVFDYMETDLHAVIRANILEPVHKQYVVYQLIKVIKYLHSGG 129
Query: 191 YSSR-LKVSNILLDKDINPKISDFGMA-------RICGGNELQANT------------SR 230
R +K SNILL+ + + K++DFG++ R+ L N +
Sbjct: 130 LLHRDMKPSNILLNAECHVKVADFGLSRSFVNIRRVTNNIPLSINENTENFDDDQPILTD 189
Query: 231 IVGTYGYMSPEYAIQGIFSIKS-DVFSFGVLLLEIVSGK 268
V T Y +PE + K D++S G +L EI+ GK
Sbjct: 190 YVATRWYRAPEILLGSTKYTKGIDMWSLGCILGEILCGK 228
>pdb|3G2F|A Chain A, Crystal Structure Of The Kinase Domain Of Bone
Morphogenetic Protein Receptor Type Ii (Bmpr2) At 2.35 A
Resolution
pdb|3G2F|B Chain B, Crystal Structure Of The Kinase Domain Of Bone
Morphogenetic Protein Receptor Type Ii (Bmpr2) At 2.35 A
Resolution
Length = 336
Score = 46.2 bits (108), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 58/217 (26%), Positives = 90/217 (41%), Gaps = 58/217 (26%)
Query: 97 LGEGGFGPVYKGVLKKGDEIAVKRLPGRSGQGLREMKNEASVIAKVQHKNLVRLL----- 151
+G G +G VYKG L + +AVK + Q KN V ++H N+ R +
Sbjct: 21 IGRGRYGAVYKGSLDE-RPVAVKVFSFANRQNFINEKNIYRV-PLMEHDNIARFIVGDER 78
Query: 152 GCCIDKDEKILIYEYMPNKSLDFFLFDPTKRMLLDWSANYSSRLKVS------------- 198
+ E +L+ EY PN SL +L T DW + S RL S
Sbjct: 79 VTADGRMEYLLVMEYYPNGSLXKYLSLHTS----DWVS--SCRLAHSVTRGLAYLHTELP 132
Query: 199 -----------------NILLDKDINPKISDFGMARICGGNEL----QANTSRI--VGTY 235
N+L+ D ISDFG++ GN L + + + I VGT
Sbjct: 133 RGDHYKPAISHRDLNSRNVLVKNDGTCVISDFGLSMRLTGNRLVRPGEEDNAAISEVGTI 192
Query: 236 GYMSPEYAIQGIFSIKS--------DVFSFGVLLLEI 264
YM+PE ++G +++ D+++ G++ EI
Sbjct: 193 RYMAPE-VLEGAVNLRDXESALKQVDMYALGLIYWEI 228
>pdb|3ELJ|A Chain A, Jnk1 Complexed With A Bis-Anilino-Pyrrolopyrimidine
Inhibitor
Length = 369
Score = 46.2 bits (108), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 51/210 (24%), Positives = 92/210 (43%), Gaps = 29/210 (13%)
Query: 83 SVSTATNKFSDANKLGEGGFGPV---YKGVLKKGDEIAVKRL--PGRSGQGLREMKNEAS 137
S T ++ + +G G G V Y +L++ +A+K+L P ++ + E
Sbjct: 23 STFTVLKRYQNLKPIGSGAQGIVCAAYDAILERN--VAIKKLSRPFQNQTHAKRAYRELV 80
Query: 138 VIAKVQHKNLVRLLGC------------------CIDKDEKILIYEYMPNKSLDFFLFDP 179
++ V HKN++ LL +D + +I + ++ + + L+
Sbjct: 81 LMKCVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLCQVIQMELDHERMSYLLYQM 140
Query: 180 TKRMLLDWSANYSSR-LKVSNILLDKDINPKISDFGMARICGGNELQANTSRIVGTYGYM 238
+ SA R LK SNI++ D KI DFG+AR G + + T +V Y Y
Sbjct: 141 LCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMM--TPYVVTRY-YR 197
Query: 239 SPEYAIQGIFSIKSDVFSFGVLLLEIVSGK 268
+PE + + D++S G ++ E+V K
Sbjct: 198 APEVILGMGYKENVDLWSVGCIMGEMVCHK 227
>pdb|3SAY|A Chain A, Crystal Structure Of Human Glycogen Synthase Kinase 3 Beta
(Gsk3b) In Complex With Inhibitor 142
pdb|3SAY|B Chain B, Crystal Structure Of Human Glycogen Synthase Kinase 3 Beta
(Gsk3b) In Complex With Inhibitor 142
Length = 430
Score = 46.2 bits (108), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 53/206 (25%), Positives = 87/206 (42%), Gaps = 35/206 (16%)
Query: 91 FSDANKLGEGGFGPVYKGVL-KKGDEIAVKRLPGRSGQGLREMKNEASVIAKVQHKNLVR 149
++D +G G FG VY+ L G+ +A+K++ Q R E ++ K+ H N+VR
Sbjct: 56 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKV----LQDKRFKNRELQIMRKLDHCNIVR 111
Query: 150 LLGCCIDKDEKI------LIYEYMPNKS------------------LDFFLFDPTKRMLL 185
L EK L+ +Y+P + +++ + +
Sbjct: 112 LRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAY 171
Query: 186 DWSANYSSR-LKVSNILLDKDINP-KISDFGMARICGGNELQANTSRIVGTYGYMSPEYA 243
S R +K N+LLD D K+ DFG A+ E N S I Y Y +PE
Sbjct: 172 IHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGE--PNVSXICSRY-YRAPELI 228
Query: 244 IQGI-FSIKSDVFSFGVLLLEIVSGK 268
++ DV+S G +L E++ G+
Sbjct: 229 FGATDYTSSIDVWSAGCVLAELLLGQ 254
>pdb|1Y8G|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Inactive Double Mutant With Selenomethionine
pdb|1Y8G|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Inactive Double Mutant With Selenomethionine
Length = 327
Score = 46.2 bits (108), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 51/193 (26%), Positives = 83/193 (43%), Gaps = 27/193 (13%)
Query: 97 LGEGGFGPV--YKGVLKKGDEIAVKRLPGR--SGQGLREMKNEASVIAKVQHKNLVRLLG 152
+G+G F V + +L G E+AVK + + L+++ E + + H N+V+L
Sbjct: 22 IGKGNFAKVKLARHILT-GKEVAVKIIDKTQLNSSSLQKLFREVRIXKVLNHPNIVKLFE 80
Query: 153 CCIDKDEKILIYEYMPNKSLDFFLFDPTKRMLLDWSANYSS----------------RLK 196
+ L+ EY + +L + + A + LK
Sbjct: 81 VIETEKTLYLVXEYASGGEVFDYLVAHGRXKEKEARAKFRQIVSAVQYCHQKFIVHRDLK 140
Query: 197 VSNILLDKDINPKISDFGMA-RICGGNELQANTSRIVGTYGYMSPE-YAIQGIFSIKSDV 254
N+LLD D N KI+DFG + GN+L A G Y +PE + + + DV
Sbjct: 141 AENLLLDADXNIKIADFGFSNEFTFGNKLDA----FCGAPPYAAPELFQGKKYDGPEVDV 196
Query: 255 FSFGVLLLEIVSG 267
+S GV+L +VSG
Sbjct: 197 WSLGVILYTLVSG 209
>pdb|2JDT|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
Isoquinoline-5- Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl) Amide
pdb|2JDV|A Chain A, Structure Of Pka-Pkb Chimera Complexed With A-443654
pdb|2UVX|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 7-Azaindole
pdb|2UW4|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
2-(4-(5-Methyl- 1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW7|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 4-(4-Chloro-
Phenyl)-4-(4-(1h-Pyrazol-4-Yl)-Phenyl)-Piperidine
pdb|4AXA|A Chain A, Structure Of Pka-pkb Chimera Complexed With
(1s)-2-amino-1-(
4-chlorophenyl)-1-(4-(1h-pyrazol-4-yl)phenyl)ethan-1-ol
Length = 351
Score = 46.2 bits (108), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 48/199 (24%), Positives = 88/199 (44%), Gaps = 25/199 (12%)
Query: 89 NKFSDANKLGEGGFGPVY-KGVLKKGDEIAVKRLPGRSGQGLREMK---NEASVIAKVQH 144
++F LG G FG V ++ G+ A+K L + L++++ NE ++ V
Sbjct: 42 DQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 101
Query: 145 KNLVRLLGCCIDKDEKILIYEYMPNKSLDFFL------FDPTKR-----MLLDWSANYS- 192
L +L D ++ EY P + L +P R ++L + +S
Sbjct: 102 PFLTKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSL 161
Query: 193 ----SRLKVSNILLDKDINPKISDFGMARICGGNELQANTSRIVGTYGYMSPEYAIQGIF 248
LK N+++D+ K++DFG A+ G T + GT Y++PE + +
Sbjct: 162 DLIYRDLKPENLMIDQQGYIKVTDFGFAKRVKGR-----TWXLCGTPEYLAPEIILSKGY 216
Query: 249 SIKSDVFSFGVLLLEIVSG 267
+ D ++ GVL+ E+ +G
Sbjct: 217 NKAVDWWALGVLIYEMAAG 235
>pdb|3P1A|A Chain A, Structure Of Human Membrane-Associated Tyrosine- And
Threonine- Specific Cdc2-Inhibitory Kinase Myt1 (Pkmyt1)
Length = 311
Score = 46.2 bits (108), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 62/231 (26%), Positives = 92/231 (39%), Gaps = 47/231 (20%)
Query: 67 RSKKKEVDQLPLFSFSSV-STATNKFSDANKLGEGGFGPVYKGVLKK-GDEIAVKRLPGR 124
R + E Q P + S S F ++LG G +G V+K K+ G AVKR
Sbjct: 34 RGEASETLQSPGYDPSRPESFFQQSFQRLSRLGHGSYGEVFKVRSKEDGRLYAVKR---- 89
Query: 125 SGQGLREMKNEASVIAKVQHKNLVRLLGCCID----KDEKILIY---------------- 164
S R K+ A +A+V V CC+ +E ++Y
Sbjct: 90 SMSPFRGPKDRARKLAEVGSHEKVGQHPCCVRLEQAWEEGGILYLQTELCGPSLQQHCEA 149
Query: 165 --EYMPNKSLDFFLFDPTKRMLLDWSANYSSRL-----KVSNILLDKDINPKISDFGMA- 216
+P + +L D LL + +S L K +NI L K+ DFG+
Sbjct: 150 WGASLPEAQVWGYLRD----TLLALAHLHSQGLVHLDVKPANIFLGPRGRCKLGDFGLLV 205
Query: 217 --RICGGNELQANTSRIVGTYGYMSPEYAIQGIFSIKSDVFSFGVLLLEIV 265
G E+Q R YM+PE +QG + +DVFS G+ +LE+
Sbjct: 206 ELGTAGAGEVQEGDPR------YMAPEL-LQGSYGTAADVFSLGLTILEVA 249
>pdb|4B99|A Chain A, Crystal Structure Of Mapk7 (Erk5) With Inhibitor
Length = 398
Score = 45.8 bits (107), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 49/221 (22%), Positives = 98/221 (44%), Gaps = 35/221 (15%)
Query: 80 SFSSVSTATNKFSDANKLGEGGFGPVYKGVLK-KGDEIAVKRLPG------RSGQGLREM 132
SF +++ +G G +G V + G ++A+K++P + + LRE+
Sbjct: 45 SFDVTFDVGDEYEIIETIGNGAYGVVSSARRRLTGQQVAIKKIPNAFDVVTNAKRTLREL 104
Query: 133 KNEASVIAKVQHKNLVRLLGCC------------------IDKDEKILIYEYMPN--KSL 172
K ++ +H N++ + ++ D +I+ P + +
Sbjct: 105 K----ILKHFKHDNIIAIKDILRPTVPYGEFKSVYVVLDLMESDLHQIIHSSQPLTLEHV 160
Query: 173 DFFLFDPTKRMLLDWSANYSSR-LKVSNILLDKDINPKISDFGMAR-IC-GGNELQANTS 229
+FL+ + + SA R LK SN+L++++ KI DFGMAR +C E Q +
Sbjct: 161 RYFLYQLLRGLKYMHSAQVIHRDLKPSNLLVNENCELKIGDFGMARGLCTSPAEHQYFMT 220
Query: 230 RIVGTYGYMSPEYAIQ-GIFSIKSDVFSFGVLLLEIVSGKK 269
V T Y +PE + ++ D++S G + E+++ ++
Sbjct: 221 EYVATRWYRAPELMLSLHEYTQAIDLWSVGCIFGEMLARRQ 261
>pdb|1GNG|A Chain A, Glycogen Synthase Kinase-3 Beta (Gsk3) Complex With
Frattide Peptide
pdb|1GNG|B Chain B, Glycogen Synthase Kinase-3 Beta (Gsk3) Complex With
Frattide Peptide
Length = 378
Score = 45.8 bits (107), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 53/206 (25%), Positives = 87/206 (42%), Gaps = 35/206 (16%)
Query: 91 FSDANKLGEGGFGPVYKGVL-KKGDEIAVKRLPGRSGQGLREMKNEASVIAKVQHKNLVR 149
++D +G G FG VY+ L G+ +A+K++ Q R E ++ K+ H N+VR
Sbjct: 41 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKV----LQDKRFKNRELQIMRKLDHCNIVR 96
Query: 150 LLGCCIDKDEKI------LIYEYMPNKS------------------LDFFLFDPTKRMLL 185
L EK L+ +Y+P + +++ + +
Sbjct: 97 LRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAY 156
Query: 186 DWSANYSSR-LKVSNILLDKDINP-KISDFGMARICGGNELQANTSRIVGTYGYMSPEYA 243
S R +K N+LLD D K+ DFG A+ E N S I Y Y +PE
Sbjct: 157 IHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGE--PNVSXICSRY-YRAPELI 213
Query: 244 IQGI-FSIKSDVFSFGVLLLEIVSGK 268
++ DV+S G +L E++ G+
Sbjct: 214 FGATDYTSSIDVWSAGCVLAELLLGQ 239
>pdb|4DIT|A Chain A, Crystal Structure Of Gsk3beta In Complex With A
Imidazopyridine Inhibitor
Length = 382
Score = 45.8 bits (107), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 53/206 (25%), Positives = 87/206 (42%), Gaps = 35/206 (16%)
Query: 91 FSDANKLGEGGFGPVYKGVL-KKGDEIAVKRLPGRSGQGLREMKNEASVIAKVQHKNLVR 149
++D +G G FG VY+ L G+ +A+K++ Q R E ++ K+ H N+VR
Sbjct: 34 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKV----LQDKRFKNRELQIMRKLDHCNIVR 89
Query: 150 LLGCCIDKDEKI------LIYEYMPNKS------------------LDFFLFDPTKRMLL 185
L EK L+ +Y+P + +++ + +
Sbjct: 90 LRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAY 149
Query: 186 DWSANYSSR-LKVSNILLDKDINP-KISDFGMARICGGNELQANTSRIVGTYGYMSPEYA 243
S R +K N+LLD D K+ DFG A+ E N S I Y Y +PE
Sbjct: 150 IHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGE--PNVSXICSRY-YRAPELI 206
Query: 244 IQGI-FSIKSDVFSFGVLLLEIVSGK 268
++ DV+S G +L E++ G+
Sbjct: 207 FGATDYTSSIDVWSAGCVLAELLLGQ 232
>pdb|3F7Z|A Chain A, X-ray Co-crystal Structure Of Glycogen Synthase Kinase
3beta In Complex With An Inhibitor
pdb|3F7Z|B Chain B, X-ray Co-crystal Structure Of Glycogen Synthase Kinase
3beta In Complex With An Inhibitor
Length = 350
Score = 45.8 bits (107), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 53/206 (25%), Positives = 87/206 (42%), Gaps = 35/206 (16%)
Query: 91 FSDANKLGEGGFGPVYKGVL-KKGDEIAVKRLPGRSGQGLREMKNEASVIAKVQHKNLVR 149
++D +G G FG VY+ L G+ +A+K++ Q R E ++ K+ H N+VR
Sbjct: 23 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKV----LQDKRFKNRELQIMRKLDHCNIVR 78
Query: 150 LLGCCIDKDEKI------LIYEYMPNK------------------SLDFFLFDPTKRMLL 185
L EK L+ +Y+P + +++ + +
Sbjct: 79 LRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAY 138
Query: 186 DWSANYSSR-LKVSNILLDKDINP-KISDFGMARICGGNELQANTSRIVGTYGYMSPEYA 243
S R +K N+LLD D K+ DFG A+ E N S I Y Y +PE
Sbjct: 139 IHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGE--PNVSXICSRY-YRAPELI 195
Query: 244 IQGI-FSIKSDVFSFGVLLLEIVSGK 268
++ DV+S G +L E++ G+
Sbjct: 196 FGATDYTSSIDVWSAGCVLAELLLGQ 221
>pdb|3IEC|A Chain A, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|B Chain B, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|C Chain C, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|D Chain D, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
Length = 319
Score = 45.8 bits (107), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 53/198 (26%), Positives = 84/198 (42%), Gaps = 37/198 (18%)
Query: 97 LGEGGFGPV--YKGVLKKGDEIAVKRLPGR--SGQGLREMKNEASVIAKVQHKNLVRLLG 152
+G+G F V + +L G E+AVK + + L+++ E ++ + H N+V+L
Sbjct: 15 IGKGNFAKVKLARHILT-GKEVAVKIIDKTQLNSSSLQKLFREVRIMKVLNHPNIVKLFE 73
Query: 153 CCIDKDEKILIYEYMPNKSLDFFLFDP---------TKRMLLDWSANYSSR-------LK 196
+ L+ EY + +L K + + Y + LK
Sbjct: 74 VIETEKTLYLVMEYASGGEVFDYLVAHGWMKEKEARAKFRQIVSAVQYCHQKFIVHRDLK 133
Query: 197 VSNILLDKDINPKISDFGMA-RICGGNELQANTSRIVGTYGYMSPEYAIQGIFSIKS--- 252
N+LLD D+N KI+DFG + GN+L SP YA +F K
Sbjct: 134 AENLLLDADMNIKIADFGFSNEFTFGNKLDTFCG---------SPPYAAPELFQGKKYDG 184
Query: 253 ---DVFSFGVLLLEIVSG 267
DV+S GV+L +VSG
Sbjct: 185 PEVDVWSLGVILYTLVSG 202
>pdb|2OW3|A Chain A, Glycogen Synthase Kinase-3 Beta In Complex With Bis-
(Indole)maleimide Pyridinophane Inhibitor
pdb|2OW3|B Chain B, Glycogen Synthase Kinase-3 Beta In Complex With Bis-
(Indole)maleimide Pyridinophane Inhibitor
Length = 352
Score = 45.8 bits (107), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 53/206 (25%), Positives = 87/206 (42%), Gaps = 35/206 (16%)
Query: 91 FSDANKLGEGGFGPVYKGVL-KKGDEIAVKRLPGRSGQGLREMKNEASVIAKVQHKNLVR 149
++D +G G FG VY+ L G+ +A+K++ Q R E ++ K+ H N+VR
Sbjct: 22 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKV----LQDKRFKNRELQIMRKLDHCNIVR 77
Query: 150 LLGCCIDKDEKI------LIYEYMPNK------------------SLDFFLFDPTKRMLL 185
L EK L+ +Y+P + +++ + +
Sbjct: 78 LRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAY 137
Query: 186 DWSANYSSR-LKVSNILLDKDINP-KISDFGMARICGGNELQANTSRIVGTYGYMSPEYA 243
S R +K N+LLD D K+ DFG A+ E N S I Y Y +PE
Sbjct: 138 IHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGE--PNVSXICSRY-YRAPELI 194
Query: 244 IQGI-FSIKSDVFSFGVLLLEIVSGK 268
++ DV+S G +L E++ G+
Sbjct: 195 FGATDYTSSIDVWSAGCVLAELLLGQ 220
>pdb|2WZJ|A Chain A, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|B Chain B, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|C Chain C, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|D Chain D, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|E Chain E, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|F Chain F, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
Length = 327
Score = 45.8 bits (107), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 51/198 (25%), Positives = 83/198 (41%), Gaps = 37/198 (18%)
Query: 97 LGEGGFGPV--YKGVLKKGDEIAVKRLPGR--SGQGLREMKNEASVIAKVQHKNLVRLLG 152
+G+G F V + +L G E+AV+ + + L+++ E ++ + H N+V+L
Sbjct: 22 IGKGNFAKVKLARHILT-GKEVAVRIIDKTQLNSSSLQKLFREVRIMKVLNHPNIVKLFE 80
Query: 153 CCIDKDEKILIYEYMPNKSLDFFLFDPTKRMLLDWSANYSS----------------RLK 196
+ L+ EY + +L + + A + LK
Sbjct: 81 VIETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARAKFRQIVSAVQYCHQKFIVHRDLK 140
Query: 197 VSNILLDKDINPKISDFGMA-RICGGNELQANTSRIVGTYGYMSPEYAIQGIFSIKS--- 252
N+LLD D+N KI+DFG + GN+L SP YA +F K
Sbjct: 141 AENLLLDADMNIKIADFGFSNEFTFGNKLDEFCG---------SPPYAAPELFQGKKYDG 191
Query: 253 ---DVFSFGVLLLEIVSG 267
DV+S GV+L +VSG
Sbjct: 192 PEVDVWSLGVILYTLVSG 209
>pdb|4AFJ|A Chain A, 5-Aryl-4-Carboxamide-1,3-Oxazoles: Potent And Selective
Gsk-3 Inhibitors
pdb|4AFJ|B Chain B, 5-Aryl-4-Carboxamide-1,3-Oxazoles: Potent And Selective
Gsk-3 Inhibitors
Length = 367
Score = 45.8 bits (107), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 53/206 (25%), Positives = 87/206 (42%), Gaps = 35/206 (16%)
Query: 91 FSDANKLGEGGFGPVYKGVL-KKGDEIAVKRLPGRSGQGLREMKNEASVIAKVQHKNLVR 149
++D +G G FG VY+ L G+ +A+K++ Q R E ++ K+ H N+VR
Sbjct: 30 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKV----LQDKRFKNRELQIMRKLDHCNIVR 85
Query: 150 LLGCCIDKDEKI------LIYEYMPNKS------------------LDFFLFDPTKRMLL 185
L EK L+ +Y+P + +++ + +
Sbjct: 86 LRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAY 145
Query: 186 DWSANYSSR-LKVSNILLDKDINP-KISDFGMARICGGNELQANTSRIVGTYGYMSPEYA 243
S R +K N+LLD D K+ DFG A+ E N S I Y Y +PE
Sbjct: 146 IHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGE--PNVSXICSRY-YRAPELI 202
Query: 244 IQGI-FSIKSDVFSFGVLLLEIVSGK 268
++ DV+S G +L E++ G+
Sbjct: 203 FGATDYTSSIDVWSAGCVLAELLLGQ 228
>pdb|3I7C|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor Na-Pp2
pdb|3NYV|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Non-Specific Inhibitor
Whi-P180
Length = 484
Score = 45.8 bits (107), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 65/218 (29%), Positives = 98/218 (44%), Gaps = 45/218 (20%)
Query: 84 VSTATNKFSDANK----LGEGGFGPVYKGVLKK----GDEIAVKRLPGRSGQGLREMKNE 135
V +T FSD K LG+G FG V +L K G E AVK + R +++ ++
Sbjct: 17 VQHSTAIFSDRYKGQRVLGKGSFGEV---ILCKDKITGQECAVKVISKRQ---VKQKTDK 70
Query: 136 ASVIAKVQ------HKNLVRLLGCCIDKDEKILIYE-YMPNKSLD-------FFLFDPTK 181
S++ +VQ H N+ +L DK L+ E Y + D F D +
Sbjct: 71 ESLLREVQLLKQLDHPNIXKLYEFFEDKGYFYLVGEVYTGGELFDEIISRKRFSEVDAAR 130
Query: 182 --RMLLDWSANYSSR-------LKVSNILLD---KDINPKISDFGMARICGGNELQANTS 229
R +L Y + LK N+LL+ KD N +I DFG++ E
Sbjct: 131 IIRQVLS-GITYXHKNKIVHRDLKPENLLLESKSKDANIRIIDFGLSTHF---EASKKXK 186
Query: 230 RIVGTYGYMSPEYAIQGIFSIKSDVFSFGVLLLEIVSG 267
+GT Y++PE + G + K DV+S GV+L ++SG
Sbjct: 187 DKIGTAYYIAPE-VLHGTYDEKCDVWSTGVILYILLSG 223
>pdb|3F88|A Chain A, Glycogen Synthase Kinase 3beta Inhibitor Complex
pdb|3F88|B Chain B, Glycogen Synthase Kinase 3beta Inhibitor Complex
Length = 349
Score = 45.8 bits (107), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 53/206 (25%), Positives = 87/206 (42%), Gaps = 35/206 (16%)
Query: 91 FSDANKLGEGGFGPVYKGVL-KKGDEIAVKRLPGRSGQGLREMKNEASVIAKVQHKNLVR 149
++D +G G FG VY+ L G+ +A+K++ Q R E ++ K+ H N+VR
Sbjct: 22 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKV----LQDKRFKNRELQIMRKLDHCNIVR 77
Query: 150 LLGCCIDKDEKI------LIYEYMPNK------------------SLDFFLFDPTKRMLL 185
L EK L+ +Y+P + +++ + +
Sbjct: 78 LRYFFYSSGEKKDVVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAY 137
Query: 186 DWSANYSSR-LKVSNILLDKDINP-KISDFGMARICGGNELQANTSRIVGTYGYMSPEYA 243
S R +K N+LLD D K+ DFG A+ E N S I Y Y +PE
Sbjct: 138 IHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGE--PNVSXICSRY-YRAPELI 194
Query: 244 IQGI-FSIKSDVFSFGVLLLEIVSGK 268
++ DV+S G +L E++ G+
Sbjct: 195 FGATDYTSSIDVWSAGCVLAELLLGQ 220
>pdb|1OVE|A Chain A, The Structure Of P38 Alpha In Complex With A
Dihydroquinolinone
pdb|1R3C|A Chain A, The Structure Of P38alpha C162s Mutant
pdb|2I0H|A Chain A, The Structure Of P38alpha In Complex With An
Arylpyridazinone
pdb|3GC7|A Chain A, The Structure Of P38alpha In Complex With A
Dihydroquinazolinone
pdb|3NEW|A Chain A, P38-Alpha Complexed With Compound 10
Length = 366
Score = 45.8 bits (107), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 49/224 (21%), Positives = 101/224 (45%), Gaps = 31/224 (13%)
Query: 83 SVSTATNKFSDANKLGEGGFGPVYKGV-LKKGDEIAVKRL--PGRSGQGLREMKNEASVI 139
++ ++ + + +G G +G V K G +AVK+L P +S + E ++
Sbjct: 22 TIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLL 81
Query: 140 AKVQHKNLVRLLGC-----CIDKDEKILIYEYMPNKSLD--------------FFLFDPT 180
++H+N++ LL +++ + + ++ L+ F ++
Sbjct: 82 KHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQIL 141
Query: 181 KRMLLDWSANYSSR-LKVSNILLDKDINPKISDFGMARICGGNELQANTSRIVGTYGYMS 239
+ + SA+ R LK SN+ +++D KI DFG+AR + V T Y +
Sbjct: 142 RGLKYIHSADIIHRDLKPSNLAVNEDSELKILDFGLAR-----HTDDEMTGYVATRWYRA 196
Query: 240 PEYAIQGI-FSIKSDVFSFGVLLLEIVSGKKTTGFYRTDSLTLL 282
PE + + ++ D++S G ++ E+++G+ T F TD + L
Sbjct: 197 PEIMLNWMHYNQTVDIWSVGCIMAELLTGR--TLFPGTDHIDQL 238
>pdb|2XS0|A Chain A, Linear Binding Motifs For Jnk And For Calcineurin
Antagonistically Control The Nuclear Shuttling Of Nfat4
Length = 386
Score = 45.8 bits (107), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 49/209 (23%), Positives = 90/209 (43%), Gaps = 29/209 (13%)
Query: 83 SVSTATNKFSDANKLGEGGFGPV---YKGVLKKGDEIAVKRL--PGRSGQGLREMKNEAS 137
S T ++ + +G G G V Y +L++ +A+K+L P ++ + E
Sbjct: 20 STFTVLKRYQNLKPIGSGAQGIVCAAYDAILERN--VAIKKLSRPFQNQTHAKRAYRELV 77
Query: 138 VIAKVQHKNLVRLLGC------------------CIDKDEKILIYEYMPNKSLDFFLFDP 179
++ V HKN++ LL +D + +I + ++ + + L+
Sbjct: 78 LMKCVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLCQVIQMELDHERMSYLLYQM 137
Query: 180 TKRMLLDWSANYSSR-LKVSNILLDKDINPKISDFGMARICGGNELQANTSRIVGTYGYM 238
+ SA R LK SNI++ D KI DFG+AR G + + V T Y
Sbjct: 138 LCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMVP---FVVTRYYR 194
Query: 239 SPEYAIQGIFSIKSDVFSFGVLLLEIVSG 267
+PE + + D++S G ++ E++ G
Sbjct: 195 APEVILGMGYKENVDIWSVGCIMGEMIKG 223
>pdb|1Q5K|A Chain A, Crystal Structure Of Glycogen Synthase Kinase 3 In
Complexed With Inhibitor
pdb|1Q5K|B Chain B, Crystal Structure Of Glycogen Synthase Kinase 3 In
Complexed With Inhibitor
pdb|3I4B|A Chain A, Crystal Structure Of Gsk3b In Complex With A
Pyrimidylpyrrole Inhibitor
pdb|3I4B|B Chain B, Crystal Structure Of Gsk3b In Complex With A
Pyrimidylpyrrole Inhibitor
pdb|3L1S|A Chain A, 3-Aryl-4-(Arylhydrazono)-1h-Pyrazol-5-Ones: Highly Ligand
Efficient And Potent Inhibitors Of Gsk3
pdb|3L1S|B Chain B, 3-Aryl-4-(Arylhydrazono)-1h-Pyrazol-5-Ones: Highly Ligand
Efficient And Potent Inhibitors Of Gsk3
Length = 414
Score = 45.8 bits (107), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 53/206 (25%), Positives = 87/206 (42%), Gaps = 35/206 (16%)
Query: 91 FSDANKLGEGGFGPVYKGVL-KKGDEIAVKRLPGRSGQGLREMKNEASVIAKVQHKNLVR 149
++D +G G FG VY+ L G+ +A+K++ Q R E ++ K+ H N+VR
Sbjct: 50 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKV----LQDKRFKNRELQIMRKLDHCNIVR 105
Query: 150 LLGCCIDKDEKI------LIYEYMPNKS------------------LDFFLFDPTKRMLL 185
L EK L+ +Y+P + +++ + +
Sbjct: 106 LRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAY 165
Query: 186 DWSANYSSR-LKVSNILLDKDINP-KISDFGMARICGGNELQANTSRIVGTYGYMSPEYA 243
S R +K N+LLD D K+ DFG A+ E N S I Y Y +PE
Sbjct: 166 IHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGE--PNVSYICSRY-YRAPELI 222
Query: 244 IQGI-FSIKSDVFSFGVLLLEIVSGK 268
++ DV+S G +L E++ G+
Sbjct: 223 FGATDYTSSIDVWSAGCVLAELLLGQ 248
>pdb|2Y8O|A Chain A, Crystal Structure Of Human P38alpha Complexed With A Mapk
Docking Peptide
Length = 362
Score = 45.8 bits (107), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 49/224 (21%), Positives = 101/224 (45%), Gaps = 31/224 (13%)
Query: 83 SVSTATNKFSDANKLGEGGFGPVYKGV-LKKGDEIAVKRL--PGRSGQGLREMKNEASVI 139
++ ++ + + +G G +G V K G +AVK+L P +S + E ++
Sbjct: 18 TIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLL 77
Query: 140 AKVQHKNLVRLLGC-----CIDKDEKILIYEYMPNKSLD--------------FFLFDPT 180
++H+N++ LL +++ + + ++ L+ F ++
Sbjct: 78 KHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQIL 137
Query: 181 KRMLLDWSANYSSR-LKVSNILLDKDINPKISDFGMARICGGNELQANTSRIVGTYGYMS 239
+ + SA+ R LK SN+ +++D KI DFG+AR + V T Y +
Sbjct: 138 RGLKYIHSADIIHRDLKPSNLAVNEDSELKILDFGLAR-----HTDDEMTGYVATRWYRA 192
Query: 240 PEYAIQGI-FSIKSDVFSFGVLLLEIVSGKKTTGFYRTDSLTLL 282
PE + + ++ D++S G ++ E+++G+ T F TD + L
Sbjct: 193 PEIMLNWMHYNQTVDIWSVGCIMAELLTGR--TLFPGTDHIDQL 234
>pdb|1R0E|A Chain A, Glycogen Synthase Kinase-3 Beta In Complex With
3-Indolyl-4- Arylmaleimide Inhibitor
pdb|1R0E|B Chain B, Glycogen Synthase Kinase-3 Beta In Complex With
3-Indolyl-4- Arylmaleimide Inhibitor
Length = 391
Score = 45.8 bits (107), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 53/206 (25%), Positives = 87/206 (42%), Gaps = 35/206 (16%)
Query: 91 FSDANKLGEGGFGPVYKGVL-KKGDEIAVKRLPGRSGQGLREMKNEASVIAKVQHKNLVR 149
++D +G G FG VY+ L G+ +A+K++ Q R E ++ K+ H N+VR
Sbjct: 27 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKV----LQDKRFKNRELQIMRKLDHCNIVR 82
Query: 150 LLGCCIDKDEKI------LIYEYMPNK------------------SLDFFLFDPTKRMLL 185
L EK L+ +Y+P + +++ + +
Sbjct: 83 LRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAY 142
Query: 186 DWSANYSSR-LKVSNILLDKDINP-KISDFGMARICGGNELQANTSRIVGTYGYMSPEYA 243
S R +K N+LLD D K+ DFG A+ E N S I Y Y +PE
Sbjct: 143 IHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGE--PNVSYICSRY-YRAPELI 199
Query: 244 IQGI-FSIKSDVFSFGVLLLEIVSGK 268
++ DV+S G +L E++ G+
Sbjct: 200 FGATDYTSSIDVWSAGCVLAELLLGQ 225
>pdb|3ZDI|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide And Inhibitor 7d
Length = 350
Score = 45.8 bits (107), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 53/206 (25%), Positives = 87/206 (42%), Gaps = 35/206 (16%)
Query: 91 FSDANKLGEGGFGPVYKGVL-KKGDEIAVKRLPGRSGQGLREMKNEASVIAKVQHKNLVR 149
++D +G G FG VY+ L G+ +A+K++ Q R E ++ K+ H N+VR
Sbjct: 22 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKV----LQDKRFKNRELQIMRKLDHCNIVR 77
Query: 150 LLGCCIDKDEKI------LIYEYMPNK------------------SLDFFLFDPTKRMLL 185
L EK L+ +Y+P + +++ + +
Sbjct: 78 LRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAY 137
Query: 186 DWSANYSSR-LKVSNILLDKDINP-KISDFGMARICGGNELQANTSRIVGTYGYMSPEYA 243
S R +K N+LLD D K+ DFG A+ E N S I Y Y +PE
Sbjct: 138 IHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGE--PNVSXICSRY-YRAPELI 194
Query: 244 IQGI-FSIKSDVFSFGVLLLEIVSGK 268
++ DV+S G +L E++ G+
Sbjct: 195 FGATDYTSSIDVWSAGCVLAELLLGQ 220
>pdb|1H8F|A Chain A, Glycogen Synthase Kinase 3 Beta.
pdb|1H8F|B Chain B, Glycogen Synthase Kinase 3 Beta
Length = 352
Score = 45.8 bits (107), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 53/206 (25%), Positives = 87/206 (42%), Gaps = 35/206 (16%)
Query: 91 FSDANKLGEGGFGPVYKGVL-KKGDEIAVKRLPGRSGQGLREMKNEASVIAKVQHKNLVR 149
++D +G G FG VY+ L G+ +A+K++ QG E ++ K+ H N+VR
Sbjct: 22 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKV----LQGKAFKNRELQIMRKLDHCNIVR 77
Query: 150 LLGCCIDKDEKI------LIYEYMPNK------------------SLDFFLFDPTKRMLL 185
L EK L+ +Y+P + +++ + +
Sbjct: 78 LRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAY 137
Query: 186 DWSANYSSR-LKVSNILLDKDINP-KISDFGMARICGGNELQANTSRIVGTYGYMSPEYA 243
S R +K N+LLD D K+ DFG A+ E N S I Y Y +PE
Sbjct: 138 IHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGE--PNVSYICSRY-YRAPELI 194
Query: 244 IQGI-FSIKSDVFSFGVLLLEIVSGK 268
++ DV+S G +L E++ G+
Sbjct: 195 FGATDYTSSIDVWSAGCVLAELLLGQ 220
>pdb|1I09|A Chain A, Structure Of Glycogen Synthase Kinase-3 (Gsk3b)
pdb|1I09|B Chain B, Structure Of Glycogen Synthase Kinase-3 (Gsk3b)
pdb|1J1B|A Chain A, Binary Complex Structure Of Human Tau Protein Kinase I
With Amppnp
pdb|1J1B|B Chain B, Binary Complex Structure Of Human Tau Protein Kinase I
With Amppnp
pdb|1J1C|A Chain A, Binary Complex Structure Of Human Tau Protein Kinase I
With Adp
pdb|1J1C|B Chain B, Binary Complex Structure Of Human Tau Protein Kinase I
With Adp
pdb|2JLD|A Chain A, Extremely Tight Binding Of Ruthenium Complex To Glycogen
Synthase Kinase 3
pdb|2JLD|B Chain B, Extremely Tight Binding Of Ruthenium Complex To Glycogen
Synthase Kinase 3
pdb|3M1S|A Chain A, Structure Of Ruthenium Half-Sandwich Complex Bound To
Glycogen Synthase Kinase 3
pdb|3M1S|B Chain B, Structure Of Ruthenium Half-Sandwich Complex Bound To
Glycogen Synthase Kinase 3
pdb|3PUP|A Chain A, Structure Of Glycogen Synthase Kinase 3 Beta (Gsk3b) In
Complex With A Ruthenium Octasporine Ligand (Os1)
pdb|3PUP|B Chain B, Structure Of Glycogen Synthase Kinase 3 Beta (Gsk3b) In
Complex With A Ruthenium Octasporine Ligand (Os1)
Length = 420
Score = 45.8 bits (107), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 53/206 (25%), Positives = 87/206 (42%), Gaps = 35/206 (16%)
Query: 91 FSDANKLGEGGFGPVYKGVL-KKGDEIAVKRLPGRSGQGLREMKNEASVIAKVQHKNLVR 149
++D +G G FG VY+ L G+ +A+K++ Q R E ++ K+ H N+VR
Sbjct: 56 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKV----LQDKRFKNRELQIMRKLDHCNIVR 111
Query: 150 LLGCCIDKDEKI------LIYEYMPNKS------------------LDFFLFDPTKRMLL 185
L EK L+ +Y+P + +++ + +
Sbjct: 112 LRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAY 171
Query: 186 DWSANYSSR-LKVSNILLDKDINP-KISDFGMARICGGNELQANTSRIVGTYGYMSPEYA 243
S R +K N+LLD D K+ DFG A+ E N S I Y Y +PE
Sbjct: 172 IHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGE--PNVSYICSRY-YRAPELI 228
Query: 244 IQGI-FSIKSDVFSFGVLLLEIVSGK 268
++ DV+S G +L E++ G+
Sbjct: 229 FGATDYTSSIDVWSAGCVLAELLLGQ 254
>pdb|1UV5|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With
6-Bromoindirubin-3'-Oxime
Length = 350
Score = 45.8 bits (107), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 53/206 (25%), Positives = 87/206 (42%), Gaps = 35/206 (16%)
Query: 91 FSDANKLGEGGFGPVYKGVL-KKGDEIAVKRLPGRSGQGLREMKNEASVIAKVQHKNLVR 149
++D +G G FG VY+ L G+ +A+K++ QG E ++ K+ H N+VR
Sbjct: 22 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKV----LQGKAFKNRELQIMRKLDHCNIVR 77
Query: 150 LLGCCIDKDEKI------LIYEYMPNK------------------SLDFFLFDPTKRMLL 185
L EK L+ +Y+P + +++ + +
Sbjct: 78 LRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAY 137
Query: 186 DWSANYSSR-LKVSNILLDKDINP-KISDFGMARICGGNELQANTSRIVGTYGYMSPEYA 243
S R +K N+LLD D K+ DFG A+ E N S I Y Y +PE
Sbjct: 138 IHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGE--PNVSYICSRY-YRAPELI 194
Query: 244 IQGI-FSIKSDVFSFGVLLLEIVSGK 268
++ DV+S G +L E++ G+
Sbjct: 195 FGATDYTSSIDVWSAGCVLAELLLGQ 220
>pdb|1A06|A Chain A, Calmodulin-Dependent Protein Kinase From Rat
Length = 332
Score = 45.8 bits (107), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 56/198 (28%), Positives = 84/198 (42%), Gaps = 36/198 (18%)
Query: 97 LGEGGFGPVYKGVLKKGDE------IAVKRLPGRSGQGLREMKNEASVIAKVQHKNLVRL 150
LG G F V K+ + IA K L G+ G M+NE +V+ K++H N+V L
Sbjct: 26 LGTGAFSEVILAEDKRTQKLVAIKCIAKKALEGKEGS----MENEIAVLHKIKHPNIVAL 81
Query: 151 ------------------LGCCIDKDEKILIYEYMPNKSLDFFLFDPTKRMLLDWSANYS 192
G D+ + Y L F + D K L D +
Sbjct: 82 DDIYESGGHLYLIMQLVSGGELFDRIVEKGFYTERDASRLIFQVLDAVK-YLHDLGIVHR 140
Query: 193 SRLKVSNIL---LDKDINPKISDFGMARICGGNELQANTSRIVGTYGYMSPEYAIQGIFS 249
LK N+L LD+D ISDFG++++ + + S GT GY++PE Q +S
Sbjct: 141 D-LKPENLLYYSLDEDSKIMISDFGLSKM---EDPGSVLSTACGTPGYVAPEVLAQKPYS 196
Query: 250 IKSDVFSFGVLLLEIVSG 267
D +S GV+ ++ G
Sbjct: 197 KAVDCWSIGVIAYILLCG 214
>pdb|3ZRK|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRK|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRL|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRL|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRM|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As Gsk-
3beta Inhibitors
pdb|3ZRM|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As Gsk-
3beta Inhibitors
Length = 371
Score = 45.8 bits (107), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 53/206 (25%), Positives = 87/206 (42%), Gaps = 35/206 (16%)
Query: 91 FSDANKLGEGGFGPVYKGVL-KKGDEIAVKRLPGRSGQGLREMKNEASVIAKVQHKNLVR 149
++D +G G FG VY+ L G+ +A+K++ Q R E ++ K+ H N+VR
Sbjct: 34 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKV----LQDKRFKNRELQIMRKLDHCNIVR 89
Query: 150 LLGCCIDKDEKI------LIYEYMPNK------------------SLDFFLFDPTKRMLL 185
L EK L+ +Y+P + +++ + +
Sbjct: 90 LRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAY 149
Query: 186 DWSANYSSR-LKVSNILLDKDINP-KISDFGMARICGGNELQANTSRIVGTYGYMSPEYA 243
S R +K N+LLD D K+ DFG A+ E N S I Y Y +PE
Sbjct: 150 IHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGE--PNVSXICSRY-YRAPELI 206
Query: 244 IQGI-FSIKSDVFSFGVLLLEIVSGK 268
++ DV+S G +L E++ G+
Sbjct: 207 FGATDYTSSIDVWSAGCVLAELLLGQ 232
>pdb|2ZV2|A Chain A, Crystal Structure Of Human CalciumCALMODULIN-Dependent
Protein Kinase Kinase 2, Beta, Camkk2 Kinase Domain In
Complex With Sto-609
Length = 298
Score = 45.8 bits (107), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 45/161 (27%), Positives = 79/161 (49%), Gaps = 24/161 (14%)
Query: 129 LREMKNEASVIAKVQHKNLVRLLGCCIDKDEKIL--IYEY--------------MPNKSL 172
+ ++ E +++ K+ H N+V+L+ D +E L ++E +
Sbjct: 80 IEQVYQEIAILKKLDHPNVVKLVEVLDDPNEDHLYMVFELVNQGPVMEVPTLKPLSEDQA 139
Query: 173 DFFLFDPTKRM-LLDWSANYSSRLKVSNILLDKDINPKISDFGMA-RICGGNELQANTSR 230
F+ D K + L + +K SN+L+ +D + KI+DFG++ G + L +NT
Sbjct: 140 RFYFQDLIKGIEYLHYQKIIHRDIKPSNLLVGEDGHIKIADFGVSNEFKGSDALLSNT-- 197
Query: 231 IVGTYGYMSPE--YAIQGIFSIKS-DVFSFGVLLLEIVSGK 268
VGT +M+PE + IFS K+ DV++ GV L V G+
Sbjct: 198 -VGTPAFMAPESLSETRKIFSGKALDVWAMGVTLYCFVFGQ 237
>pdb|3GB2|A Chain A, Gsk3beta Inhibitor Complex
Length = 353
Score = 45.8 bits (107), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 53/206 (25%), Positives = 87/206 (42%), Gaps = 35/206 (16%)
Query: 91 FSDANKLGEGGFGPVYKGVL-KKGDEIAVKRLPGRSGQGLREMKNEASVIAKVQHKNLVR 149
++D +G G FG VY+ L G+ +A+K++ Q R E ++ K+ H N+VR
Sbjct: 26 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKV----LQDKRFKNRELQIMRKLDHCNIVR 81
Query: 150 LLGCCIDKDEKI------LIYEYMPNK------------------SLDFFLFDPTKRMLL 185
L EK L+ +Y+P + +++ + +
Sbjct: 82 LRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAY 141
Query: 186 DWSANYSSR-LKVSNILLDKDINP-KISDFGMARICGGNELQANTSRIVGTYGYMSPEYA 243
S R +K N+LLD D K+ DFG A+ E N S I Y Y +PE
Sbjct: 142 IHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGE--PNVSXICSRY-YRAPELI 198
Query: 244 IQGI-FSIKSDVFSFGVLLLEIVSGK 268
++ DV+S G +L E++ G+
Sbjct: 199 FGATDYTSSIDVWSAGCVLAELLLGQ 224
>pdb|3TUB|A Chain A, Crystal Structure Of Syk Kinase Domain With 1-(5-(6,7-
Dimethoxyquinolin-4-Yloxy)pyridin-2-Yl)-3-((1r,2s)-2-
Phenylcyclopropyl)urea
Length = 293
Score = 45.8 bits (107), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 54/200 (27%), Positives = 91/200 (45%), Gaps = 30/200 (15%)
Query: 96 KLGEGGFGPVYKGVLK-----KGDEIAVKRLPGRSGQGLREMKNEASVIAKVQHKNLVRL 150
+LG G FG V KG + K + + + E+ EA+V+ ++ + +VR+
Sbjct: 34 ELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRM 93
Query: 151 LGCCIDKDEKILIYE---------------YMPNKSLDFFLFDPTKRMLLDWSANYSSR- 194
+G C + + +L+ E ++ +K++ + + M +N+ R
Sbjct: 94 IGIC-EAESWMLVMEMAELGPLNKYLQQNRHVKDKNIIELVHQVSMGMKYLEESNFVHRD 152
Query: 195 LKVSNILLDKDINPKISDFGMARICGGNE----LQANTSRIVGTYGYMSPEYAIQGIFSI 250
L N+LL KISDFG+++ +E Q + V Y +PE FS
Sbjct: 153 LAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWY---APECINYYKFSS 209
Query: 251 KSDVFSFGVLLLEIVS-GKK 269
KSDV+SFGVL+ E S G+K
Sbjct: 210 KSDVWSFGVLMWEAFSYGQK 229
>pdb|4DFX|E Chain E, Crystal Structure Of Myristoylated K7c Catalytic Subunit
Of Camp- Dependent Protein Kinase In Complex With Sp20
And Amp-Pnp
pdb|4DFZ|E Chain E, Crystal Structure Of Myristoylated K7c Catalytic Subunit
Of Camp- Dependent Protein Kinase In Complex With Sp20
Length = 350
Score = 45.8 bits (107), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 57/221 (25%), Positives = 100/221 (45%), Gaps = 27/221 (12%)
Query: 68 SKKKEVDQLPLFSFSSVSTAT-NKFSDANKLGEGGFGPVYKGVLKK-GDEIAVKRLPGRS 125
+K KE D L + S +TA ++F LG G FG V K+ G+ A+K L +
Sbjct: 20 AKAKE-DFLKKWETPSQNTAQLDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQK 78
Query: 126 GQGLREMK---NEASVIAKVQHKNLVRLLGCCIDKDEKILIYEYMPNKSLDFFL------ 176
L++++ NE ++ V LV+L D ++ EY+ + L
Sbjct: 79 VVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRF 138
Query: 177 FDPTKR-----MLLDWSANYS-----SRLKVSNILLDKDINPKISDFGMARICGGNELQA 226
+P R ++L + +S LK N+L+D+ +++DFG A+ G
Sbjct: 139 XEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGR---- 194
Query: 227 NTSRIVGTYGYMSPEYAIQGIFSIKSDVFSFGVLLLEIVSG 267
T + GT Y++PE + ++ D ++ GVL+ E+ +G
Sbjct: 195 -TWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|3VF8|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Syk Catalytic
Domain With Pyrazolylbenzimidazole Inhibitor 416
pdb|3VF9|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Syk Catalytic
Domain With Thienopyrazolylindole Inhibitor 027
pdb|3TUC|A Chain A, Crystal Structure Of Syk Kinase Domain With
1-Benzyl-N-(5-(6,7-
Dimethoxyquinolin-4-Yloxy)pyridin-2-Yl)-2-Oxo-1,
2-Dihydropyridine-3- Carboxamide
pdb|3TUD|A Chain A, Crystal Structure Of Syk Kinase Domain With
N-(4-Methyl-3-(8-Methyl-7-
Oxo-2-(Phenylamino)-7,8-Dihydropyrido[2,
3-D]pyrimidin-6-Yl)phenyl)-3- (Trifluoromethyl)benzamide
Length = 299
Score = 45.8 bits (107), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 54/200 (27%), Positives = 91/200 (45%), Gaps = 30/200 (15%)
Query: 96 KLGEGGFGPVYKGVLK-----KGDEIAVKRLPGRSGQGLREMKNEASVIAKVQHKNLVRL 150
+LG G FG V KG + K + + + E+ EA+V+ ++ + +VR+
Sbjct: 34 ELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRM 93
Query: 151 LGCCIDKDEKILIYE---------------YMPNKSLDFFLFDPTKRMLLDWSANYSSR- 194
+G C + + +L+ E ++ +K++ + + M +N+ R
Sbjct: 94 IGIC-EAESWMLVMEMAELGPLNKYLQQNRHVKDKNIIELVHQVSMGMKYLEESNFVHRD 152
Query: 195 LKVSNILLDKDINPKISDFGMARICGGNE----LQANTSRIVGTYGYMSPEYAIQGIFSI 250
L N+LL KISDFG+++ +E Q + V Y +PE FS
Sbjct: 153 LAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWY---APECINYYKFSS 209
Query: 251 KSDVFSFGVLLLEIVS-GKK 269
KSDV+SFGVL+ E S G+K
Sbjct: 210 KSDVWSFGVLMWEAFSYGQK 229
>pdb|3MH2|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3O8U|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 45.8 bits (107), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 48/224 (21%), Positives = 101/224 (45%), Gaps = 31/224 (13%)
Query: 83 SVSTATNKFSDANKLGEGGFGPVYKGV-LKKGDEIAVKRL--PGRSGQGLREMKNEASVI 139
++ ++ + + +G G +G V K G +AVK+L P +S + E ++
Sbjct: 16 TIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLL 75
Query: 140 AKVQHKNLVRLLGC-----CIDKDEKILIYEYMPNKSLD--------------FFLFDPT 180
++H+N++ LL +++ + + ++ L+ F ++
Sbjct: 76 KHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQIL 135
Query: 181 KRMLLDWSANYSSR-LKVSNILLDKDINPKISDFGMARICGGNELQANTSRIVGTYGYMS 239
+ + SA+ R LK SN+ +++D KI D+G+AR + V T Y +
Sbjct: 136 RGLKYIHSADIIHRDLKPSNLAVNEDCELKILDYGLAR-----HTDDEMTGYVATRWYRA 190
Query: 240 PEYAIQGI-FSIKSDVFSFGVLLLEIVSGKKTTGFYRTDSLTLL 282
PE + + ++ D++S G ++ E+++G+ T F TD + L
Sbjct: 191 PEIMLNWMHYNQTVDIWSVGCIMAELLTGR--TLFPGTDHIDQL 232
>pdb|1L3R|E Chain E, Crystal Structure Of A Transition State Mimic Of The
Catalytic Subunit Of Camp-Dependent Protein Kinase
pdb|3TNP|C Chain C, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
pdb|3TNP|F Chain F, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
pdb|3TNQ|B Chain B, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
Length = 350
Score = 45.8 bits (107), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 57/221 (25%), Positives = 100/221 (45%), Gaps = 27/221 (12%)
Query: 68 SKKKEVDQLPLFSFSSVSTAT-NKFSDANKLGEGGFGPVYKGVLKK-GDEIAVKRLPGRS 125
+K KE D L + S +TA ++F LG G FG V K+ G+ A+K L +
Sbjct: 20 AKAKE-DFLKKWETPSQNTAQLDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQK 78
Query: 126 GQGLREMK---NEASVIAKVQHKNLVRLLGCCIDKDEKILIYEYMPNKSLDFFL------ 176
L++++ NE ++ V LV+L D ++ EY+ + L
Sbjct: 79 VVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRF 138
Query: 177 FDPTKR-----MLLDWSANYS-----SRLKVSNILLDKDINPKISDFGMARICGGNELQA 226
+P R ++L + +S LK N+L+D+ +++DFG A+ G
Sbjct: 139 XEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGR---- 194
Query: 227 NTSRIVGTYGYMSPEYAIQGIFSIKSDVFSFGVLLLEIVSG 267
T + GT Y++PE + ++ D ++ GVL+ E+ +G
Sbjct: 195 -TWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|3SD0|A Chain A, Identification Of A Glycogen Synthase Kinase-3b Inhibitor
That Attenuates Hyperactivity In Clock Mutant Mice
pdb|3SD0|B Chain B, Identification Of A Glycogen Synthase Kinase-3b Inhibitor
That Attenuates Hyperactivity In Clock Mutant Mice
pdb|4B7T|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide And Leucettine L4
Length = 350
Score = 45.8 bits (107), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 53/206 (25%), Positives = 87/206 (42%), Gaps = 35/206 (16%)
Query: 91 FSDANKLGEGGFGPVYKGVL-KKGDEIAVKRLPGRSGQGLREMKNEASVIAKVQHKNLVR 149
++D +G G FG VY+ L G+ +A+K++ Q R E ++ K+ H N+VR
Sbjct: 22 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKV----LQDKRFKNRELQIMRKLDHCNIVR 77
Query: 150 LLGCCIDKDEKI------LIYEYMPNK------------------SLDFFLFDPTKRMLL 185
L EK L+ +Y+P + +++ + +
Sbjct: 78 LRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAY 137
Query: 186 DWSANYSSR-LKVSNILLDKDINP-KISDFGMARICGGNELQANTSRIVGTYGYMSPEYA 243
S R +K N+LLD D K+ DFG A+ E N S I Y Y +PE
Sbjct: 138 IHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGE--PNVSYICSRY-YRAPELI 194
Query: 244 IQGI-FSIKSDVFSFGVLLLEIVSGK 268
++ DV+S G +L E++ G+
Sbjct: 195 FGATDYTSSIDVWSAGCVLAELLLGQ 220
>pdb|3SRV|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase (Syk) In
Complex With A Diaminopyrimidine Carboxamide Inhibitor
Length = 277
Score = 45.8 bits (107), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 50/194 (25%), Positives = 89/194 (45%), Gaps = 25/194 (12%)
Query: 96 KLGEGGFGPVYKGVLK-----KGDEIAVKRLPGRSGQGLREMKNEASVIAKVQHKNLVRL 150
+LG G FG V KG + K + + + E+ EA+V+ ++ + +VR+
Sbjct: 18 ELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRM 77
Query: 151 LGCCIDKDEKILIYE---------------YMPNKSLDFFLFDPTKRMLLDWSANYSSR- 194
+G C + + +L+ E ++ +K++ + + M +N+ R
Sbjct: 78 IGIC-EAESWMLVMEMAELGPLNKYLQQNRHVKDKNIIELVHQVSMGMKYLEESNFVHRD 136
Query: 195 LKVSNILLDKDINPKISDFGMARICGGNELQANTSRIVGTY--GYMSPEYAIQGIFSIKS 252
L N+LL KISDFG+++ +E ++ G + + +PE FS KS
Sbjct: 137 LAARNVLLVTQHYAKISDFGLSKALRADE-NXYKAQTHGKWPVKWYAPECINYYKFSSKS 195
Query: 253 DVFSFGVLLLEIVS 266
DV+SFGVL+ E S
Sbjct: 196 DVWSFGVLMWEAFS 209
>pdb|2QCS|A Chain A, A Complex Structure Between The Catalytic And Regulatory
Subunit Of Protein Kinase A That Represents The
Inhibited State
pdb|2CPK|E Chain E, Crystal Structure Of The Catalytic Subunit Of Cyclic
Adenosine Monophosphate-Dependent Protein Kinase
pdb|4DG0|E Chain E, Crystal Structure Of Myristoylated Wt Catalytic Subunit Of
Camp- Dependent Protein Kinase In Complex With Sp20 And
Amp-Pnp
pdb|4DG2|E Chain E, Crystal Structure Of Myristoylated Wt Catalytic Subunit Of
Camp- Dependent Protein Kinase In Complex With Sp20
pdb|4DH1|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With Low Mg2+, Atp And Ip20
pdb|4DH3|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Atp And Ip20
pdb|4DH5|A Chain A, Room Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Adp,
Phosphate, And Ip20
pdb|4DH7|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Amp-pnp And
Ip20'
pdb|4DH8|A Chain A, Room Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Amp-pnp And
Ip20
Length = 350
Score = 45.8 bits (107), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 57/221 (25%), Positives = 100/221 (45%), Gaps = 27/221 (12%)
Query: 68 SKKKEVDQLPLFSFSSVSTAT-NKFSDANKLGEGGFGPVYKGVLKK-GDEIAVKRLPGRS 125
+K KE D L + S +TA ++F LG G FG V K+ G+ A+K L +
Sbjct: 20 AKAKE-DFLKKWETPSQNTAQLDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQK 78
Query: 126 GQGLREMK---NEASVIAKVQHKNLVRLLGCCIDKDEKILIYEYMPNKSLDFFL------ 176
L++++ NE ++ V LV+L D ++ EY+ + L
Sbjct: 79 VVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRF 138
Query: 177 FDPTKR-----MLLDWSANYS-----SRLKVSNILLDKDINPKISDFGMARICGGNELQA 226
+P R ++L + +S LK N+L+D+ +++DFG A+ G
Sbjct: 139 XEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGR---- 194
Query: 227 NTSRIVGTYGYMSPEYAIQGIFSIKSDVFSFGVLLLEIVSG 267
T + GT Y++PE + ++ D ++ GVL+ E+ +G
Sbjct: 195 -TWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|2O5K|A Chain A, Crystal Structure Of Gsk3beta In Complex With A
Benzoimidazol Inhibitor
Length = 372
Score = 45.8 bits (107), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 53/206 (25%), Positives = 87/206 (42%), Gaps = 35/206 (16%)
Query: 91 FSDANKLGEGGFGPVYKGVL-KKGDEIAVKRLPGRSGQGLREMKNEASVIAKVQHKNLVR 149
++D +G G FG VY+ L G+ +A+K++ Q R E ++ K+ H N+VR
Sbjct: 35 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKV----LQDKRFKNRELQIMRKLDHCNIVR 90
Query: 150 LLGCCIDKDEKI------LIYEYMPNK------------------SLDFFLFDPTKRMLL 185
L EK L+ +Y+P + +++ + +
Sbjct: 91 LRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAY 150
Query: 186 DWSANYSSR-LKVSNILLDKDINP-KISDFGMARICGGNELQANTSRIVGTYGYMSPEYA 243
S R +K N+LLD D K+ DFG A+ E N S I Y Y +PE
Sbjct: 151 IHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGE--PNVSYICSRY-YRAPELI 207
Query: 244 IQGI-FSIKSDVFSFGVLLLEIVSGK 268
++ DV+S G +L E++ G+
Sbjct: 208 FGATDYTSSIDVWSAGCVLAELLLGQ 233
>pdb|3PVB|A Chain A, Crystal Structure Of (73-244)ria:c Holoenzyme Of
Camp-Dependent Protein Kinase
Length = 345
Score = 45.8 bits (107), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 57/221 (25%), Positives = 100/221 (45%), Gaps = 27/221 (12%)
Query: 68 SKKKEVDQLPLFSFSSVSTAT-NKFSDANKLGEGGFGPVYKGVLKK-GDEIAVKRLPGRS 125
+K KE D L + S +TA ++F LG G FG V K+ G+ A+K L +
Sbjct: 15 AKAKE-DFLKKWETPSQNTAQLDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQK 73
Query: 126 GQGLREMK---NEASVIAKVQHKNLVRLLGCCIDKDEKILIYEYMPNKSLDFFL------ 176
L++++ NE ++ V LV+L D ++ EY+ + L
Sbjct: 74 VVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRF 133
Query: 177 FDPTKR-----MLLDWSANYS-----SRLKVSNILLDKDINPKISDFGMARICGGNELQA 226
+P R ++L + +S LK N+L+D+ +++DFG A+ G
Sbjct: 134 XEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGR---- 189
Query: 227 NTSRIVGTYGYMSPEYAIQGIFSIKSDVFSFGVLLLEIVSG 267
T + GT Y++PE + ++ D ++ GVL+ E+ +G
Sbjct: 190 -TWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 229
>pdb|1O9U|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide
Length = 350
Score = 45.4 bits (106), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 53/206 (25%), Positives = 87/206 (42%), Gaps = 35/206 (16%)
Query: 91 FSDANKLGEGGFGPVYKGVL-KKGDEIAVKRLPGRSGQGLREMKNEASVIAKVQHKNLVR 149
++D +G G FG VY+ L G+ +A+K++ QG E ++ K+ H N+VR
Sbjct: 22 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKV----LQGKAFKNRELQIMRKLDHCNIVR 77
Query: 150 LLGCCIDKDEKI------LIYEYMPNKS------------------LDFFLFDPTKRMLL 185
L EK L+ +Y+P + +++ + +
Sbjct: 78 LRYFFYSSGEKKDEVYLNLVLDYVPATVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAY 137
Query: 186 DWSANYSSR-LKVSNILLDKDINP-KISDFGMARICGGNELQANTSRIVGTYGYMSPEYA 243
S R +K N+LLD D K+ DFG A+ E N S I Y Y +PE
Sbjct: 138 IHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGE--PNVSXICSRY-YRAPELI 194
Query: 244 IQGI-FSIKSDVFSFGVLLLEIVSGK 268
++ DV+S G +L E++ G+
Sbjct: 195 FGATDYTSSIDVWSAGCVLAELLLGQ 220
>pdb|3GC8|A Chain A, The Structure Of P38beta C162s In Complex With A
Dihydroquinazolinone
pdb|3GC8|B Chain B, The Structure Of P38beta C162s In Complex With A
Dihydroquinazolinone
Length = 370
Score = 45.4 bits (106), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 49/212 (23%), Positives = 93/212 (43%), Gaps = 33/212 (15%)
Query: 83 SVSTATNKFSDANKLGEGGFGPV---YKGVLKKGDEIAVKRL--PGRSGQGLREMKNEAS 137
+V + +G G +G V Y L++ ++AVK+L P +S R E
Sbjct: 22 TVWEVPQRLQGLRPVGSGAYGSVCSAYDARLRQ--KVAVKKLSRPFQSLIHARRTYRELR 79
Query: 138 VIAKVQHKNLVRLLGCCI------DKDEKILIYEYM-------------PNKSLDFFLFD 178
++ ++H+N++ LL D E L+ M ++ + F ++
Sbjct: 80 LLKHLKHENVIGLLDVFTPATSIEDFSEVYLVTTLMGADLNNIVKCQALSDEHVQFLVYQ 139
Query: 179 PTKRMLLDWSANYSSR-LKVSNILLDKDINPKISDFGMARICGGNELQANTSRIVGTYGY 237
+ + SA R LK SN+ +++D +I DFG+AR + + V T Y
Sbjct: 140 LLRGLKYIHSAGIIHRDLKPSNVAVNEDSELRILDFGLAR-----QADEEMTGYVATRWY 194
Query: 238 MSPEYAIQGI-FSIKSDVFSFGVLLLEIVSGK 268
+PE + + ++ D++S G ++ E++ GK
Sbjct: 195 RAPEIMLNWMHYNQTVDIWSVGCIMAELLQGK 226
>pdb|4FVR|A Chain A, Crystal Structure Of The Jak2 Pseudokinase Domain Mutant
V617f (Mg- Atp-Bound Form)
Length = 289
Score = 45.4 bits (106), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 54/204 (26%), Positives = 85/204 (41%), Gaps = 38/204 (18%)
Query: 97 LGEGGFGPVYKGVLKK-GD-------EIAVKRLPGRSGQGLREMKNEASVIAKVQHKNLV 148
LG+G F ++KGV ++ GD E+ +K L AS+++K+ HK+LV
Sbjct: 16 LGQGTFTKIFKGVRREVGDYGQLHETEVLLKVLDKAHRNYSESFFEAASMMSKLSHKHLV 75
Query: 149 RLLGCCIDKDEKILIYEYMPNKSLDFFLFDPTKRMLLDWSANYSSRLK------------ 196
G C DE IL+ E++ SLD +L + + W + +L
Sbjct: 76 LNYGVCFCGDENILVQEFVKFGSLDTYLKKNKNCINILWKLEVAKQLAWAMHFLEENTLI 135
Query: 197 -----VSNILL-----DKDINP---KISDFGMARICGGNELQANTSRIVGTYGYMSPEYA 243
NILL K NP K+SD G++ ++ V +P+
Sbjct: 136 HGNVCAKNILLIREEDRKTGNPPFIKLSDPGISITVLPKDILQERIPWVPPECIENPKN- 194
Query: 244 IQGIFSIKSDVFSFGVLLLEIVSG 267
++ +D +SFG L EI SG
Sbjct: 195 ----LNLATDKWSFGTTLWEICSG 214
>pdb|4IC7|A Chain A, Crystal Structure Of The Erk5 Kinase Domain In Complex
With An Mkk5 Binding Fragment
pdb|4IC7|D Chain D, Crystal Structure Of The Erk5 Kinase Domain In Complex
With An Mkk5 Binding Fragment
pdb|4IC8|A Chain A, Crystal Structure Of The Apo Erk5 Kinase Domain
pdb|4IC8|B Chain B, Crystal Structure Of The Apo Erk5 Kinase Domain
Length = 442
Score = 45.4 bits (106), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 49/221 (22%), Positives = 98/221 (44%), Gaps = 35/221 (15%)
Query: 80 SFSSVSTATNKFSDANKLGEGGFGPVYKGVLK-KGDEIAVKRLPG------RSGQGLREM 132
SF +++ +G G +G V + G ++A+K++P + + LRE+
Sbjct: 46 SFDVTFDVGDEYEIIETIGNGAYGVVSSARRRLTGQQVAIKKIPNAFDVVTNAKRTLREL 105
Query: 133 KNEASVIAKVQHKNLVRLLGCC------------------IDKDEKILIYEYMPN--KSL 172
K ++ +H N++ + ++ D +I+ P + +
Sbjct: 106 K----ILKHFKHDNIIAIKDILRPTVPYGEFKSVYVVLDLMESDLHQIIHSSQPLTLEHV 161
Query: 173 DFFLFDPTKRMLLDWSANYSSR-LKVSNILLDKDINPKISDFGMAR-IC-GGNELQANTS 229
+FL+ + + SA R LK SN+L++++ KI DFGMAR +C E Q +
Sbjct: 162 RYFLYQLLRGLKYMHSAQVIHRDLKPSNLLVNENCELKIGDFGMARGLCTSPAEHQYFMT 221
Query: 230 RIVGTYGYMSPEYAIQ-GIFSIKSDVFSFGVLLLEIVSGKK 269
V T Y +PE + ++ D++S G + E+++ ++
Sbjct: 222 EYVATRWYRAPELMLSLHEYTQAIDLWSVGCIFGEMLARRQ 262
>pdb|4FL3|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
Length = 635
Score = 45.4 bits (106), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 55/206 (26%), Positives = 92/206 (44%), Gaps = 49/206 (23%)
Query: 96 KLGEGGFGPVYKG--------------VLK-KGDEIAVKRLPGRSGQGLREMKNEASVIA 140
+LG G FG V KG +LK + ++ A+K E+ EA+V+
Sbjct: 376 ELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKD----------ELLAEANVMQ 425
Query: 141 KVQHKNLVRLLGCCIDKDEKILIYE---------------YMPNKSLDFFLFDPTKRMLL 185
++ + +VR++G C + + +L+ E ++ +K++ + + M
Sbjct: 426 QLDNPYIVRMIGIC-EAESWMLVMEMAELGPLNKYLQQNRHVKDKNIIELVHQVSMGMKY 484
Query: 186 DWSANYSSR-LKVSNILLDKDINPKISDFGMARICGGNE----LQANTSRIVGTYGYMSP 240
+N+ R L N+LL KISDFG+++ +E Q + V Y +P
Sbjct: 485 LEESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWY---AP 541
Query: 241 EYAIQGIFSIKSDVFSFGVLLLEIVS 266
E FS KSDV+SFGVL+ E S
Sbjct: 542 ECINYYKFSSKSDVWSFGVLMWEAFS 567
>pdb|1PYX|A Chain A, Gsk-3 Beta Complexed With Amp-Pnp
pdb|1PYX|B Chain B, Gsk-3 Beta Complexed With Amp-Pnp
pdb|3DU8|A Chain A, Crystal Structure Of Gsk-3 Beta In Complex With
Nms-869553a
pdb|3DU8|B Chain B, Crystal Structure Of Gsk-3 Beta In Complex With
Nms-869553a
Length = 422
Score = 45.4 bits (106), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 53/206 (25%), Positives = 87/206 (42%), Gaps = 35/206 (16%)
Query: 91 FSDANKLGEGGFGPVYKGVL-KKGDEIAVKRLPGRSGQGLREMKNEASVIAKVQHKNLVR 149
++D +G G FG VY+ L G+ +A+K++ Q R E ++ K+ H N+VR
Sbjct: 58 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKV----LQDKRFKNRELQIMRKLDHCNIVR 113
Query: 150 LLGCCIDKDEKI------LIYEYMPNKS------------------LDFFLFDPTKRMLL 185
L EK L+ +Y+P + +++ + +
Sbjct: 114 LRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAY 173
Query: 186 DWSANYSSR-LKVSNILLDKDINP-KISDFGMARICGGNELQANTSRIVGTYGYMSPEYA 243
S R +K N+LLD D K+ DFG A+ E N S I Y Y +PE
Sbjct: 174 IHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGE--PNVSYICSRY-YRAPELI 230
Query: 244 IQGI-FSIKSDVFSFGVLLLEIVSGK 268
++ DV+S G +L E++ G+
Sbjct: 231 FGATDYTSSIDVWSAGCVLAELLLGQ 256
>pdb|3FHI|A Chain A, Crystal Structure Of A Complex Between The Catalytic And
Regulatory (Ri{alpha}) Subunits Of Pka
Length = 350
Score = 45.4 bits (106), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 57/221 (25%), Positives = 100/221 (45%), Gaps = 27/221 (12%)
Query: 68 SKKKEVDQLPLFSFSSVSTAT-NKFSDANKLGEGGFGPVYKGVLKK-GDEIAVKRLPGRS 125
+K KE D L + S +TA ++F LG G FG V K+ G+ A+K L +
Sbjct: 20 AKAKE-DFLKKWETPSQNTAQLDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQK 78
Query: 126 GQGLREMK---NEASVIAKVQHKNLVRLLGCCIDKDEKILIYEYMPNKSLDFFL------ 176
L++++ NE ++ V LV+L D ++ EY+ + L
Sbjct: 79 VVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRF 138
Query: 177 FDPTKR-----MLLDWSANYS-----SRLKVSNILLDKDINPKISDFGMARICGGNELQA 226
+P R ++L + +S LK N+L+D+ +++DFG A+ G
Sbjct: 139 SEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGR---- 194
Query: 227 NTSRIVGTYGYMSPEYAIQGIFSIKSDVFSFGVLLLEIVSG 267
T + GT Y++PE + ++ D ++ GVL+ E+ +G
Sbjct: 195 -TWXLAGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|4DFL|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A Sulfonamidopyrazine Piperidine Inhibitor
pdb|4DFN|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
An Adamantylpyrazine Inhibitor
Length = 274
Score = 45.4 bits (106), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 54/200 (27%), Positives = 91/200 (45%), Gaps = 30/200 (15%)
Query: 96 KLGEGGFGPVYKGVLK-----KGDEIAVKRLPGRSGQGLREMKNEASVIAKVQHKNLVRL 150
+LG G FG V KG + K + + + E+ EA+V+ ++ + +VR+
Sbjct: 14 ELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRM 73
Query: 151 LGCCIDKDEKILIYE---------------YMPNKSLDFFLFDPTKRMLLDWSANYSSR- 194
+G C + + +L+ E ++ +K++ + + M +N+ R
Sbjct: 74 IGIC-EAESWMLVMEMAELGPLNKYLQQNRHVKDKNIIELVHQVSMGMKYLEESNFVHRD 132
Query: 195 LKVSNILLDKDINPKISDFGMARICGGNE----LQANTSRIVGTYGYMSPEYAIQGIFSI 250
L N+LL KISDFG+++ +E Q + V Y +PE FS
Sbjct: 133 LAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWY---APECINYYKFSS 189
Query: 251 KSDVFSFGVLLLEIVS-GKK 269
KSDV+SFGVL+ E S G+K
Sbjct: 190 KSDVWSFGVLMWEAFSYGQK 209
>pdb|3EMG|A Chain A, Discovery And Sar Of Novel 4-Thiazolyl-2-
Phenylaminopyrimidines As Potent Inhibitors Of Spleen
Tyrosine Kinase (Syk)
Length = 291
Score = 45.4 bits (106), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 54/200 (27%), Positives = 91/200 (45%), Gaps = 30/200 (15%)
Query: 96 KLGEGGFGPVYKGVLK-----KGDEIAVKRLPGRSGQGLREMKNEASVIAKVQHKNLVRL 150
+LG G FG V KG + K + + + E+ EA+V+ ++ + +VR+
Sbjct: 32 ELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRM 91
Query: 151 LGCCIDKDEKILIYE---------------YMPNKSLDFFLFDPTKRMLLDWSANYSSR- 194
+G C + + +L+ E ++ +K++ + + M +N+ R
Sbjct: 92 IGIC-EAESWMLVMEMAELGPLNKYLQQNRHVKDKNIIELVHQVSMGMKYLEESNFVHRD 150
Query: 195 LKVSNILLDKDINPKISDFGMARICGGNE----LQANTSRIVGTYGYMSPEYAIQGIFSI 250
L N+LL KISDFG+++ +E Q + V Y +PE FS
Sbjct: 151 LAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWY---APECINYYKFSS 207
Query: 251 KSDVFSFGVLLLEIVS-GKK 269
KSDV+SFGVL+ E S G+K
Sbjct: 208 KSDVWSFGVLMWEAFSYGQK 227
>pdb|2YZA|A Chain A, Crystal Structure Of Kinase Domain Of Human
5'-Amp-Activated Protein Kinase Alpha-2 Subunit Mutant
(T172d)
pdb|3AQV|A Chain A, Human Amp-Activated Protein Kinase Alpha 2 Subunit Kinase
Domain (T172d) Complexed With Compound C
Length = 276
Score = 45.4 bits (106), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 48/195 (24%), Positives = 89/195 (45%), Gaps = 24/195 (12%)
Query: 94 ANKLGEGGFGPVYKGVLK-KGDEIAVK---RLPGRSGQGLREMKNEASVIAKVQHKNLVR 149
+ LG G FG V G + G ++AVK R RS + ++K E + +H ++++
Sbjct: 16 GDTLGVGTFGKVKIGEHQLTGHKVAVKILNRQKIRSLDVVGKIKREIQNLKLFRHPHIIK 75
Query: 150 LLGCCIDKDEKILIYEYMPNKSLDFFLFDPTK------RMLLDW---SANYSSR------ 194
L + ++ EY+ L ++ + R L + +Y R
Sbjct: 76 LYQVISTPTDFFMVMEYVSGGELFDYICKHGRVEEMEARRLFQQILSAVDYCHRHMVVHR 135
Query: 195 -LKVSNILLDKDINPKISDFGMARICGGNELQANTSRIVGTYGYMSPEYAIQGIFS-IKS 252
LK N+LLD +N KI+DFG++ + E ++ G+ Y +PE +++ +
Sbjct: 136 DLKPENVLLDAHMNAKIADFGLSNMMSDGEFLRDSC---GSPNYAAPEVISGRLYAGPEV 192
Query: 253 DVFSFGVLLLEIVSG 267
D++S GV+L ++ G
Sbjct: 193 DIWSCGVILYALLCG 207
>pdb|4FL2|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
Length = 636
Score = 45.4 bits (106), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 55/206 (26%), Positives = 92/206 (44%), Gaps = 49/206 (23%)
Query: 96 KLGEGGFGPVYKG--------------VLK-KGDEIAVKRLPGRSGQGLREMKNEASVIA 140
+LG G FG V KG +LK + ++ A+K E+ EA+V+
Sbjct: 377 ELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKD----------ELLAEANVMQ 426
Query: 141 KVQHKNLVRLLGCCIDKDEKILIYE---------------YMPNKSLDFFLFDPTKRMLL 185
++ + +VR++G C + + +L+ E ++ +K++ + + M
Sbjct: 427 QLDNPYIVRMIGIC-EAESWMLVMEMAELGPLNKYLQQNRHVKDKNIIELVHQVSMGMKY 485
Query: 186 DWSANYSSR-LKVSNILLDKDINPKISDFGMARICGGNE----LQANTSRIVGTYGYMSP 240
+N+ R L N+LL KISDFG+++ +E Q + V Y +P
Sbjct: 486 LEESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWY---AP 542
Query: 241 EYAIQGIFSIKSDVFSFGVLLLEIVS 266
E FS KSDV+SFGVL+ E S
Sbjct: 543 ECINYYKFSSKSDVWSFGVLMWEAFS 568
>pdb|1Q3D|A Chain A, Gsk-3 Beta Complexed With Staurosporine
pdb|1Q3D|B Chain B, Gsk-3 Beta Complexed With Staurosporine
pdb|1Q3W|A Chain A, Gsk-3 Beta Complexed With Alsterpaullone
pdb|1Q3W|B Chain B, Gsk-3 Beta Complexed With Alsterpaullone
pdb|1Q41|A Chain A, Gsk-3 Beta Complexed With Indirubin-3'-Monoxime
pdb|1Q41|B Chain B, Gsk-3 Beta Complexed With Indirubin-3'-Monoxime
pdb|1Q4L|A Chain A, Gsk-3 Beta Complexed With Inhibitor I-5
pdb|1Q4L|B Chain B, Gsk-3 Beta Complexed With Inhibitor I-5
pdb|3Q3B|A Chain A, 6-Amino-4-(Pyrimidin-4-Yl)pyridones: Novel Glycogen
Synthase Kinase-3 Inhibitors
pdb|3Q3B|B Chain B, 6-Amino-4-(Pyrimidin-4-Yl)pyridones: Novel Glycogen
Synthase Kinase-3 Inhibitors
Length = 424
Score = 45.4 bits (106), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 53/206 (25%), Positives = 87/206 (42%), Gaps = 35/206 (16%)
Query: 91 FSDANKLGEGGFGPVYKGVL-KKGDEIAVKRLPGRSGQGLREMKNEASVIAKVQHKNLVR 149
++D +G G FG VY+ L G+ +A+K++ Q R E ++ K+ H N+VR
Sbjct: 60 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKV----LQDKRFKNRELQIMRKLDHCNIVR 115
Query: 150 LLGCCIDKDEKI------LIYEYMPNK------------------SLDFFLFDPTKRMLL 185
L EK L+ +Y+P + +++ + +
Sbjct: 116 LRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAY 175
Query: 186 DWSANYSSR-LKVSNILLDKDINP-KISDFGMARICGGNELQANTSRIVGTYGYMSPEYA 243
S R +K N+LLD D K+ DFG A+ E N S I Y Y +PE
Sbjct: 176 IHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGE--PNVSYICSRY-YRAPELI 232
Query: 244 IQGI-FSIKSDVFSFGVLLLEIVSGK 268
++ DV+S G +L E++ G+
Sbjct: 233 FGATDYTSSIDVWSAGCVLAELLLGQ 258
>pdb|4ACC|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACC|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACD|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACD|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACG|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACG|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACH|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACH|B Chain B, Gsk3b In Complex With Inhibitor
Length = 465
Score = 45.4 bits (106), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 53/206 (25%), Positives = 87/206 (42%), Gaps = 35/206 (16%)
Query: 91 FSDANKLGEGGFGPVYKGVL-KKGDEIAVKRLPGRSGQGLREMKNEASVIAKVQHKNLVR 149
++D +G G FG VY+ L G+ +A+K++ Q R E ++ K+ H N+VR
Sbjct: 101 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKV----LQDKRFKNRELQIMRKLDHCNIVR 156
Query: 150 LLGCCIDKDEKI------LIYEYMPNKS------------------LDFFLFDPTKRMLL 185
L EK L+ +Y+P + +++ + +
Sbjct: 157 LRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAY 216
Query: 186 DWSANYSSR-LKVSNILLDKDINP-KISDFGMARICGGNELQANTSRIVGTYGYMSPEYA 243
S R +K N+LLD D K+ DFG A+ E N S I Y Y +PE
Sbjct: 217 IHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGE--PNVSYICSRY-YRAPELI 273
Query: 244 IQGI-FSIKSDVFSFGVLLLEIVSGK 268
++ DV+S G +L E++ G+
Sbjct: 274 FGATDYTSSIDVWSAGCVLAELLLGQ 299
>pdb|3GC9|A Chain A, The Structure Of P38beta C119s, C162s In Complex With A
Dihydroquinazolinone Inhibitor
pdb|3GC9|B Chain B, The Structure Of P38beta C119s, C162s In Complex With A
Dihydroquinazolinone Inhibitor
Length = 370
Score = 45.4 bits (106), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 49/212 (23%), Positives = 93/212 (43%), Gaps = 33/212 (15%)
Query: 83 SVSTATNKFSDANKLGEGGFGPV---YKGVLKKGDEIAVKRL--PGRSGQGLREMKNEAS 137
+V + +G G +G V Y L++ ++AVK+L P +S R E
Sbjct: 22 TVWEVPQRLQGLRPVGSGAYGSVCSAYDARLRQ--KVAVKKLSRPFQSLIHARRTYRELR 79
Query: 138 VIAKVQHKNLVRLLGCCI------DKDEKILIYEYM-------------PNKSLDFFLFD 178
++ ++H+N++ LL D E L+ M ++ + F ++
Sbjct: 80 LLKHLKHENVIGLLDVFTPATSIEDFSEVYLVTTLMGADLNNIVKSQALSDEHVQFLVYQ 139
Query: 179 PTKRMLLDWSANYSSR-LKVSNILLDKDINPKISDFGMARICGGNELQANTSRIVGTYGY 237
+ + SA R LK SN+ +++D +I DFG+AR + + V T Y
Sbjct: 140 LLRGLKYIHSAGIIHRDLKPSNVAVNEDSELRILDFGLAR-----QADEEMTGYVATRWY 194
Query: 238 MSPEYAIQGI-FSIKSDVFSFGVLLLEIVSGK 268
+PE + + ++ D++S G ++ E++ GK
Sbjct: 195 RAPEIMLNWMHYNQTVDIWSVGCIMAELLQGK 226
>pdb|4F4P|A Chain A, Syk In Complex With Ligand Lasw836
Length = 273
Score = 45.4 bits (106), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 52/196 (26%), Positives = 88/196 (44%), Gaps = 29/196 (14%)
Query: 96 KLGEGGFGPVYKGVLK-----KGDEIAVKRLPGRSGQGLREMKNEASVIAKVQHKNLVRL 150
+LG G FG V KG + K + + + E+ EA+V+ ++ + +VR+
Sbjct: 12 ELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRM 71
Query: 151 LGCCIDKDEKILIYE---------------YMPNKSLDFFLFDPTKRMLLDWSANYSSR- 194
+G C + + +L+ E ++ +K++ + + M +N+ R
Sbjct: 72 IGIC-EAESWMLVMEMAELGPLNKYLQQNRHVKDKNIIELVHQVSMGMKYLEESNFVHRD 130
Query: 195 LKVSNILLDKDINPKISDFGMARICGGNE----LQANTSRIVGTYGYMSPEYAIQGIFSI 250
L N+LL KISDFG+++ +E Q + V Y +PE FS
Sbjct: 131 LAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWY---APECINYYKFSS 187
Query: 251 KSDVFSFGVLLLEIVS 266
KSDV+SFGVL+ E S
Sbjct: 188 KSDVWSFGVLMWEAFS 203
>pdb|4DG3|E Chain E, Crystal Structure Of R336a Mutant Of Camp-dependent
Protein Kinase With Unphosphorylated Turn Motif
Length = 371
Score = 45.4 bits (106), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 57/221 (25%), Positives = 100/221 (45%), Gaps = 27/221 (12%)
Query: 68 SKKKEVDQLPLFSFSSVSTAT-NKFSDANKLGEGGFGPVYKGVLKK-GDEIAVKRLPGRS 125
+K KE D L + S +TA ++F LG G FG V K+ G+ A+K L +
Sbjct: 41 AKAKE-DFLKKWETPSQNTAQLDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQK 99
Query: 126 GQGLREMK---NEASVIAKVQHKNLVRLLGCCIDKDEKILIYEYMPNKSLDFFL------ 176
L++++ NE ++ V LV+L D ++ EY+ + L
Sbjct: 100 VVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRF 159
Query: 177 FDPTKR-----MLLDWSANYS-----SRLKVSNILLDKDINPKISDFGMARICGGNELQA 226
+P R ++L + +S LK N+L+D+ +++DFG A+ G
Sbjct: 160 XEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGR---- 215
Query: 227 NTSRIVGTYGYMSPEYAIQGIFSIKSDVFSFGVLLLEIVSG 267
T + GT Y++PE + ++ D ++ GVL+ E+ +G
Sbjct: 216 -TWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 255
>pdb|1XBA|A Chain A, Crystal Structure Of Apo Syk Tyrosine Kinase Domain
pdb|1XBB|A Chain A, Crystal Structure Of The Syk Tyrosine Kinase Domain With
Gleevec
pdb|1XBC|A Chain A, Crystal Structure Of The Syk Tyrosine Kinase Domain With
Staurosporin
pdb|3FQE|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
Ym193306
pdb|3FQH|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A 2-Substituted 7-Azaindole
pdb|3FQH|B Chain B, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A 2-Substituted 7-Azaindole
pdb|3FQS|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
R406
pdb|4FL1|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
pdb|4FYN|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
3-(8-{4-
[ethyl-(2-hydroxy-ethyl)-amino]-phenylamino}-imidazo[1,
2-a]pyrazin-5- Yl)-phenol
pdb|4FYO|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
N-{(s)-1-
[7-(3,4-dimethoxy-phenylamino)-thiazolo[5,
4-d]pyrimidin-5-yl]- Pyrrolidin-3-yl}-terephthalamic
Acid
pdb|4FZ6|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
[6-((s)-2-
Methyl-pyrrolidin-1-yl)-pyridin-2-yl]-(6-phenyl-
imidazo[1,2- B]pyridazin-8-yl)-amine
Length = 291
Score = 45.4 bits (106), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 54/200 (27%), Positives = 91/200 (45%), Gaps = 30/200 (15%)
Query: 96 KLGEGGFGPVYKGVLK-----KGDEIAVKRLPGRSGQGLREMKNEASVIAKVQHKNLVRL 150
+LG G FG V KG + K + + + E+ EA+V+ ++ + +VR+
Sbjct: 24 ELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRM 83
Query: 151 LGCCIDKDEKILIYE---------------YMPNKSLDFFLFDPTKRMLLDWSANYSSR- 194
+G C + + +L+ E ++ +K++ + + M +N+ R
Sbjct: 84 IGIC-EAESWMLVMEMAELGPLNKYLQQNRHVKDKNIIELVHQVSMGMKYLEESNFVHRD 142
Query: 195 LKVSNILLDKDINPKISDFGMARICGGNE----LQANTSRIVGTYGYMSPEYAIQGIFSI 250
L N+LL KISDFG+++ +E Q + V Y +PE FS
Sbjct: 143 LAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWY---APECINYYKFSS 199
Query: 251 KSDVFSFGVLLLEIVS-GKK 269
KSDV+SFGVL+ E S G+K
Sbjct: 200 KSDVWSFGVLMWEAFSYGQK 219
>pdb|2QUR|A Chain A, Crystal Structure Of F327aK285P MUTANT OF CAMP-Dependent
Protein Kinase
Length = 350
Score = 45.4 bits (106), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 57/221 (25%), Positives = 100/221 (45%), Gaps = 27/221 (12%)
Query: 68 SKKKEVDQLPLFSFSSVSTAT-NKFSDANKLGEGGFGPVYKGVLKK-GDEIAVKRLPGRS 125
+K KE D L + S +TA ++F LG G FG V K+ G+ A+K L +
Sbjct: 20 AKAKE-DFLKKWETPSQNTAQLDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQK 78
Query: 126 GQGLREMK---NEASVIAKVQHKNLVRLLGCCIDKDEKILIYEYMPNKSLDFFL------ 176
L++++ NE ++ V LV+L D ++ EY+ + L
Sbjct: 79 VVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRF 138
Query: 177 FDPTKR-----MLLDWSANYS-----SRLKVSNILLDKDINPKISDFGMARICGGNELQA 226
+P R ++L + +S LK N+L+D+ +++DFG A+ G
Sbjct: 139 SEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGR---- 194
Query: 227 NTSRIVGTYGYMSPEYAIQGIFSIKSDVFSFGVLLLEIVSG 267
T + GT Y++PE + ++ D ++ GVL+ E+ +G
Sbjct: 195 -TWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|3O17|A Chain A, Crystal Structure Of Jnk1-Alpha1 Isoform
pdb|3O17|B Chain B, Crystal Structure Of Jnk1-Alpha1 Isoform
pdb|3O2M|A Chain A, Crystal Structure Of Jnk1-Alpha1 Isoform Complex With A
Biaryl Tetrazol (A-82118)
pdb|3O2M|B Chain B, Crystal Structure Of Jnk1-Alpha1 Isoform Complex With A
Biaryl Tetrazol (A-82118)
Length = 370
Score = 45.4 bits (106), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 50/210 (23%), Positives = 91/210 (43%), Gaps = 29/210 (13%)
Query: 83 SVSTATNKFSDANKLGEGGFGPV---YKGVLKKGDEIAVKRL--PGRSGQGLREMKNEAS 137
S T ++ + +G G G V Y +L++ +A+K+L P ++ + E
Sbjct: 18 STFTVLKRYQNLKPIGSGAQGIVCAAYDAILERN--VAIKKLSRPFQNQTHAKRAYRELV 75
Query: 138 VIAKVQHKNLVRLLGC------------------CIDKDEKILIYEYMPNKSLDFFLFDP 179
++ V HKN++ LL +D + +I + ++ + + L+
Sbjct: 76 LMKCVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLCQVIQMELDHERMSYLLYQM 135
Query: 180 TKRMLLDWSANYSSR-LKVSNILLDKDINPKISDFGMARICGGNELQANTSRIVGTYGYM 238
+ SA R LK SNI++ D KI DFG+AR G + + +V Y Y
Sbjct: 136 LCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMM--EPEVVTRY-YR 192
Query: 239 SPEYAIQGIFSIKSDVFSFGVLLLEIVSGK 268
+PE + + D++S G ++ E+V K
Sbjct: 193 APEVILGMGYKENVDIWSVGCIMGEMVCHK 222
>pdb|3SRV|B Chain B, Crystal Structure Of Spleen Tyrosine Kinase (Syk) In
Complex With A Diaminopyrimidine Carboxamide Inhibitor
Length = 277
Score = 45.4 bits (106), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 52/196 (26%), Positives = 88/196 (44%), Gaps = 29/196 (14%)
Query: 96 KLGEGGFGPVYKGVLK-----KGDEIAVKRLPGRSGQGLREMKNEASVIAKVQHKNLVRL 150
+LG G FG V KG + K + + + E+ EA+V+ ++ + +VR+
Sbjct: 18 ELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRM 77
Query: 151 LGCCIDKDEKILIYE---------------YMPNKSLDFFLFDPTKRMLLDWSANYSSR- 194
+G C + + +L+ E ++ +K++ + + M +N+ R
Sbjct: 78 IGIC-EAESWMLVMEMAELGPLNKYLQQNRHVKDKNIIELVHQVSMGMKYLEESNFVHRD 136
Query: 195 LKVSNILLDKDINPKISDFGMARICGGNE----LQANTSRIVGTYGYMSPEYAIQGIFSI 250
L N+LL KISDFG+++ +E Q + V Y +PE FS
Sbjct: 137 LAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWY---APECINYYKFSS 193
Query: 251 KSDVFSFGVLLLEIVS 266
KSDV+SFGVL+ E S
Sbjct: 194 KSDVWSFGVLMWEAFS 209
>pdb|1APM|E Chain E, 2.0 Angstrom Refined Crystal Structure Of The Catalytic
Subunit Of Camp-Dependent Protein Kinase Complexed With
A Peptide Inhibitor And Detergent
Length = 350
Score = 45.4 bits (106), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 57/221 (25%), Positives = 100/221 (45%), Gaps = 27/221 (12%)
Query: 68 SKKKEVDQLPLFSFSSVSTAT-NKFSDANKLGEGGFGPVYKGVLKK-GDEIAVKRLPGRS 125
+K KE D L + S +TA ++F LG G FG V K+ G+ A+K L +
Sbjct: 20 AKAKE-DFLKKWETPSQNTAQLDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQK 78
Query: 126 GQGLREMK---NEASVIAKVQHKNLVRLLGCCIDKDEKILIYEYMPNKSLDFFL------ 176
L++++ NE ++ V LV+L D ++ EY+ + L
Sbjct: 79 VVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRF 138
Query: 177 FDPTKR-----MLLDWSANYS-----SRLKVSNILLDKDINPKISDFGMARICGGNELQA 226
+P R ++L + +S LK N+L+D+ +++DFG A+ G
Sbjct: 139 AEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGR---- 194
Query: 227 NTSRIVGTYGYMSPEYAIQGIFSIKSDVFSFGVLLLEIVSG 267
T + GT Y++PE + ++ D ++ GVL+ E+ +G
Sbjct: 195 -TWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|4EJN|A Chain A, Crystal Structure Of Autoinhibited Form Of Akt1 In Complex
With N-(4-
(5-(3-Acetamidophenyl)-2-(2-Aminopyridin-3-Yl)-3h-
Imidazo[4,5- B]pyridin-3-Yl)benzyl)-3-Fluorobenzamide
Length = 446
Score = 45.4 bits (106), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 28/88 (31%), Positives = 45/88 (51%), Gaps = 4/88 (4%)
Query: 195 LKVSNILLDKDINPKISDFGMARICGGNELQANTSRIVGTYGYMSPEYAIQGIFSIKSDV 254
LK+ N++LDKD + KI+DFG+ + G + A GT Y++PE + D
Sbjct: 275 LKLENLMLDKDGHIKITDFGLCK--EGIKDGATMKTFCGTPEYLAPEVLEDNDYGRAVDW 332
Query: 255 FSFGVLLLEIVSGKKTTGFYRTDSLTLL 282
+ GV++ E++ G+ FY D L
Sbjct: 333 WGLGVVMYEMMCGR--LPFYNQDHEKLF 358
>pdb|3O96|A Chain A, Crystal Structure Of Human Akt1 With An Allosteric
Inhibitor
Length = 446
Score = 45.4 bits (106), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 28/88 (31%), Positives = 45/88 (51%), Gaps = 4/88 (4%)
Query: 195 LKVSNILLDKDINPKISDFGMARICGGNELQANTSRIVGTYGYMSPEYAIQGIFSIKSDV 254
LK+ N++LDKD + KI+DFG+ + G + A GT Y++PE + D
Sbjct: 278 LKLENLMLDKDGHIKITDFGLCK--EGIKDGATMKTFCGTPEYLAPEVLEDNDYGRAVDW 335
Query: 255 FSFGVLLLEIVSGKKTTGFYRTDSLTLL 282
+ GV++ E++ G+ FY D L
Sbjct: 336 WGLGVVMYEMMCGR--LPFYNQDHEKLF 361
>pdb|3QAL|E Chain E, Crystal Structure Of Arg280ala Mutant Of Catalytic Subunit
Of Camp- Dependent Protein Kinase
Length = 350
Score = 45.4 bits (106), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 57/221 (25%), Positives = 100/221 (45%), Gaps = 27/221 (12%)
Query: 68 SKKKEVDQLPLFSFSSVSTAT-NKFSDANKLGEGGFGPVYKGVLKK-GDEIAVKRLPGRS 125
+K KE D L + S +TA ++F LG G FG V K+ G+ A+K L +
Sbjct: 20 AKAKE-DFLKKWETPSQNTAQLDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQK 78
Query: 126 GQGLREMK---NEASVIAKVQHKNLVRLLGCCIDKDEKILIYEYMPNKSLDFFL------ 176
L++++ NE ++ V LV+L D ++ EY+ + L
Sbjct: 79 VVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRF 138
Query: 177 FDPTKR-----MLLDWSANYS-----SRLKVSNILLDKDINPKISDFGMARICGGNELQA 226
+P R ++L + +S LK N+L+D+ +++DFG A+ G
Sbjct: 139 SEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGR---- 194
Query: 227 NTSRIVGTYGYMSPEYAIQGIFSIKSDVFSFGVLLLEIVSG 267
T + GT Y++PE + ++ D ++ GVL+ E+ +G
Sbjct: 195 -TWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|3O7L|B Chain B, Crystal Structure Of Phospholamban (1-19):pka
C-Subunit:amp-Pnp:mg2+ Complex
Length = 350
Score = 45.1 bits (105), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 57/221 (25%), Positives = 100/221 (45%), Gaps = 27/221 (12%)
Query: 68 SKKKEVDQLPLFSFSSVSTAT-NKFSDANKLGEGGFGPVYKGVLKK-GDEIAVKRLPGRS 125
+K KE D L + S +TA ++F LG G FG V K+ G+ A+K L +
Sbjct: 20 AKAKE-DFLKKWETPSQNTAQLDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQK 78
Query: 126 GQGLREMK---NEASVIAKVQHKNLVRLLGCCIDKDEKILIYEYMPNKSLDFFL------ 176
L++++ NE ++ V LV+L D ++ EY+ + L
Sbjct: 79 VVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRF 138
Query: 177 FDPTKR-----MLLDWSANYS-----SRLKVSNILLDKDINPKISDFGMARICGGNELQA 226
+P R ++L + +S LK N+++D+ +++DFG A+ G
Sbjct: 139 SEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLIIDQQGYIQVTDFGFAKRVKGR---- 194
Query: 227 NTSRIVGTYGYMSPEYAIQGIFSIKSDVFSFGVLLLEIVSG 267
T + GT Y++PE I ++ D ++ GVL+ E+ +G
Sbjct: 195 -TWXLCGTPEYLAPEIIISKGYNKAVDWWALGVLIYEMAAG 234
>pdb|4EWH|B Chain B, Co-Crystal Structure Of Ack1 With Inhibitor
pdb|4EWH|A Chain A, Co-Crystal Structure Of Ack1 With Inhibitor
Length = 275
Score = 45.1 bits (105), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 55/198 (27%), Positives = 80/198 (40%), Gaps = 28/198 (14%)
Query: 95 NKLGEGGFGPVYKGVLK----KGDEIAVKRL-PGRSGQ--GLREMKNEASVIAKVQHKNL 147
KLG+G FG V +G K +AVK L P Q + + E + + + H+NL
Sbjct: 14 EKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNL 73
Query: 148 VRLLGCCIDKDEKILIYEYMPNKSLDFFLFDPTKRMLLDWSANYSSR------------- 194
+RL G + K ++ E P SL L LL + Y+ +
Sbjct: 74 IRLYGVVLTPPMK-MVTELAPLGSLLDRLRKHQGHFLLGTLSRYAVQVAEGMGYLESKRF 132
Query: 195 ----LKVSNILLDKDINPKISDFGMARICGGNELQA--NTSRIVGTYGYMSPEYAIQGIF 248
L N+LL KI DFG+ R N+ R V + + +PE F
Sbjct: 133 IHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHXVMQEHRKV-PFAWCAPESLKTRTF 191
Query: 249 SIKSDVFSFGVLLLEIVS 266
S SD + FGV L E+ +
Sbjct: 192 SHASDTWMFGVTLWEMFT 209
>pdb|4HZS|A Chain A, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|B Chain B, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|C Chain C, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|D Chain D, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
Length = 341
Score = 45.1 bits (105), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 55/198 (27%), Positives = 80/198 (40%), Gaps = 28/198 (14%)
Query: 95 NKLGEGGFGPVYKGVLK----KGDEIAVKRL-PGRSGQ--GLREMKNEASVIAKVQHKNL 147
KLG+G FG V +G K +AVK L P Q + + E + + + H+NL
Sbjct: 18 EKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNL 77
Query: 148 VRLLGCCIDKDEKILIYEYMPNKSLDFFLFDPTKRMLLDWSANYSSR------------- 194
+RL G + K ++ E P SL L LL + Y+ +
Sbjct: 78 IRLYGVVLTPPMK-MVTELAPLGSLLDRLRKHQGHFLLGTLSRYAVQVAEGMGYLESKRF 136
Query: 195 ----LKVSNILLDKDINPKISDFGMARICGGNELQ--ANTSRIVGTYGYMSPEYAIQGIF 248
L N+LL KI DFG+ R N+ R V + + +PE F
Sbjct: 137 IHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRKV-PFAWCAPESLKTRTF 195
Query: 249 SIKSDVFSFGVLLLEIVS 266
S SD + FGV L E+ +
Sbjct: 196 SHASDTWMFGVTLWEMFT 213
>pdb|1FMO|E Chain E, Crystal Structure Of A Polyhistidine-Tagged Recombinant
Catalytic Subunit Of Camp-Dependent Protein Kinase
Complexed With The Peptide Inhibitor Pki(5-24) And
Adenosine
pdb|1JLU|E Chain E, Crystal Structure Of The Catalytic Subunit Of
Camp-dependent Protein Kinase Complexed With A
Phosphorylated Substrate Peptide And Detergent
pdb|1RE8|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 2
pdb|1REJ|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 1
pdb|1REK|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 8
pdb|2QVS|E Chain E, Crystal Structure Of Type Iia Holoenzyme Of Camp-Dependent
Protein Kinase
pdb|3FJQ|E Chain E, Crystal Structure Of Camp-Dependent Protein Kinase
Catalytic Subunit Alpha In Complex With Peptide
Inhibitor Pki Alpha (6-25)
pdb|3IDB|A Chain A, Crystal Structure Of (108-268)riib:c Holoenzyme Of Camp-
Dependent Protein Kinase
pdb|3IDC|A Chain A, Crystal Structure Of (102-265)riib:c Holoenzyme Of Camp-
Dependent Protein Kinase
pdb|3O7L|D Chain D, Crystal Structure Of Phospholamban (1-19):pka
C-Subunit:amp-Pnp:mg2+ Complex
pdb|3OW3|A Chain A, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|1ATP|E Chain E, 2.2 Angstrom Refined Crystal Structure Of The Catalytic
Subunit Of Camp-Dependent Protein Kinase Complexed With
Mnatp And A Peptide Inhibitor
pdb|4DIN|A Chain A, Novel Localization And Quaternary Structure Of The Pka Ri
Beta Holoenzyme
Length = 350
Score = 45.1 bits (105), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 57/221 (25%), Positives = 100/221 (45%), Gaps = 27/221 (12%)
Query: 68 SKKKEVDQLPLFSFSSVSTAT-NKFSDANKLGEGGFGPVYKGVLKK-GDEIAVKRLPGRS 125
+K KE D L + S +TA ++F LG G FG V K+ G+ A+K L +
Sbjct: 20 AKAKE-DFLKKWETPSQNTAQLDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQK 78
Query: 126 GQGLREMK---NEASVIAKVQHKNLVRLLGCCIDKDEKILIYEYMPNKSLDFFL------ 176
L++++ NE ++ V LV+L D ++ EY+ + L
Sbjct: 79 VVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRF 138
Query: 177 FDPTKR-----MLLDWSANYS-----SRLKVSNILLDKDINPKISDFGMARICGGNELQA 226
+P R ++L + +S LK N+L+D+ +++DFG A+ G
Sbjct: 139 SEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGR---- 194
Query: 227 NTSRIVGTYGYMSPEYAIQGIFSIKSDVFSFGVLLLEIVSG 267
T + GT Y++PE + ++ D ++ GVL+ E+ +G
Sbjct: 195 -TWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|1JBP|E Chain E, Crystal Structure Of The Catalytic Subunit Of Camp-
Dependent Protein Kinase Complexed With A Substrate
Peptide, Adp And Detergent
Length = 350
Score = 45.1 bits (105), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 57/221 (25%), Positives = 100/221 (45%), Gaps = 27/221 (12%)
Query: 68 SKKKEVDQLPLFSFSSVSTAT-NKFSDANKLGEGGFGPVYKGVLKK-GDEIAVKRLPGRS 125
+K KE D L + S +TA ++F LG G FG V K+ G+ A+K L +
Sbjct: 20 AKAKE-DFLKKWETPSQNTAQLDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQK 78
Query: 126 GQGLREMK---NEASVIAKVQHKNLVRLLGCCIDKDEKILIYEYMPNKSLDFFL------ 176
L++++ NE ++ V LV+L D ++ EY+ + L
Sbjct: 79 VVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRF 138
Query: 177 FDPTKR-----MLLDWSANYS-----SRLKVSNILLDKDINPKISDFGMARICGGNELQA 226
+P R ++L + +S LK N+L+D+ +++DFG A+ G
Sbjct: 139 SEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGR---- 194
Query: 227 NTSRIVGTYGYMSPEYAIQGIFSIKSDVFSFGVLLLEIVSG 267
T + GT Y++PE + ++ D ++ GVL+ E+ +G
Sbjct: 195 -TWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|3EQP|B Chain B, Crystal Structure Of Ack1 With Compound T95
pdb|3EQP|A Chain A, Crystal Structure Of Ack1 With Compound T95
pdb|3EQR|A Chain A, Crystal Structure Of Ack1 With Compound T74
pdb|3EQR|B Chain B, Crystal Structure Of Ack1 With Compound T74
Length = 276
Score = 45.1 bits (105), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 55/198 (27%), Positives = 80/198 (40%), Gaps = 28/198 (14%)
Query: 95 NKLGEGGFGPVYKGVLK----KGDEIAVKRL-PGRSGQ--GLREMKNEASVIAKVQHKNL 147
KLG+G FG V +G K +AVK L P Q + + E + + + H+NL
Sbjct: 14 EKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNL 73
Query: 148 VRLLGCCIDKDEKILIYEYMPNKSLDFFLFDPTKRMLLDWSANYSSR------------- 194
+RL G + K ++ E P SL L LL + Y+ +
Sbjct: 74 IRLYGVVLTPPMK-MVTELAPLGSLLDRLRKHQGHFLLGTLSRYAVQVAEGMGYLESKRF 132
Query: 195 ----LKVSNILLDKDINPKISDFGMARICGGNELQ--ANTSRIVGTYGYMSPEYAIQGIF 248
L N+LL KI DFG+ R N+ R V + + +PE F
Sbjct: 133 IHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRKV-PFAWCAPESLKTRTF 191
Query: 249 SIKSDVFSFGVLLLEIVS 266
S SD + FGV L E+ +
Sbjct: 192 SHASDTWMFGVTLWEMFT 209
>pdb|2ERZ|E Chain E, Crystal Structure Of C-amp Dependent Kinase (pka) Bound To
Hydroxyfasudil
Length = 351
Score = 45.1 bits (105), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 57/221 (25%), Positives = 100/221 (45%), Gaps = 27/221 (12%)
Query: 68 SKKKEVDQLPLFSFSSVSTAT-NKFSDANKLGEGGFGPVYKGVLKK-GDEIAVKRLPGRS 125
+K KE D L + S +TA ++F LG G FG V K+ G+ A+K L +
Sbjct: 21 AKAKE-DFLKKWETPSQNTAQLDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQK 79
Query: 126 GQGLREMK---NEASVIAKVQHKNLVRLLGCCIDKDEKILIYEYMPNKSLDFFL------ 176
L++++ NE ++ V LV+L D ++ EY+ + L
Sbjct: 80 VVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRF 139
Query: 177 FDPTKR-----MLLDWSANYS-----SRLKVSNILLDKDINPKISDFGMARICGGNELQA 226
+P R ++L + +S LK N+L+D+ +++DFG A+ G
Sbjct: 140 SEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGR---- 195
Query: 227 NTSRIVGTYGYMSPEYAIQGIFSIKSDVFSFGVLLLEIVSG 267
T + GT Y++PE + ++ D ++ GVL+ E+ +G
Sbjct: 196 -TWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 235
>pdb|2H6D|A Chain A, Protein Kinase Domain Of The Human 5'-Amp-Activated
Protein Kinase Catalytic Subunit Alpha-2 (Ampk Alpha-2
Chain)
Length = 276
Score = 45.1 bits (105), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 48/195 (24%), Positives = 88/195 (45%), Gaps = 24/195 (12%)
Query: 94 ANKLGEGGFGPVYKGVLK-KGDEIAVK---RLPGRSGQGLREMKNEASVIAKVQHKNLVR 149
+ LG G FG V G + G ++AVK R RS + ++K E + +H ++++
Sbjct: 16 GDTLGVGTFGKVKIGEHQLTGHKVAVKILNRQKIRSLDVVGKIKREIQNLKLFRHPHIIK 75
Query: 150 LLGCCIDKDEKILIYEYMPNKSLDFFLFDPTK------RMLLDW---SANYSSR------ 194
L + ++ EY+ L ++ + R L + +Y R
Sbjct: 76 LYQVISTPTDFFMVMEYVSGGELFDYICKHGRVEEMEARRLFQQILSAVDYCHRHMVVHR 135
Query: 195 -LKVSNILLDKDINPKISDFGMARICGGNELQANTSRIVGTYGYMSPEYAIQGIFS-IKS 252
LK N+LLD +N KI+DFG++ + E + G+ Y +PE +++ +
Sbjct: 136 DLKPENVLLDAHMNAKIADFGLSNMMSDGEFLRTSC---GSPNYAAPEVISGRLYAGPEV 192
Query: 253 DVFSFGVLLLEIVSG 267
D++S GV+L ++ G
Sbjct: 193 DIWSCGVILYALLCG 207
>pdb|1BKX|A Chain A, A Binary Complex Of The Catalytic Subunit Of
Camp-Dependent Protein Kinase And Adenosine Further
Defines Conformational Flexibility
pdb|1BX6|A Chain A, Crystal Structure Of The Potent Natural Product Inhibitor
Balanol In Complex With The Catalytic Subunit Of Camp-
Dependent Protein Kinase
Length = 350
Score = 45.1 bits (105), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 57/221 (25%), Positives = 100/221 (45%), Gaps = 27/221 (12%)
Query: 68 SKKKEVDQLPLFSFSSVSTAT-NKFSDANKLGEGGFGPVYKGVLKK-GDEIAVKRLPGRS 125
+K KE D L + S +TA ++F LG G FG V K+ G+ A+K L +
Sbjct: 20 AKAKE-DFLKKWETPSQNTAQLDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQK 78
Query: 126 GQGLREMK---NEASVIAKVQHKNLVRLLGCCIDKDEKILIYEYMPNKSLDFFL------ 176
L++++ NE ++ V LV+L D ++ EY+ + L
Sbjct: 79 VVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRF 138
Query: 177 FDPTKR-----MLLDWSANYS-----SRLKVSNILLDKDINPKISDFGMARICGGNELQA 226
+P R ++L + +S LK N+L+D+ +++DFG A+ G
Sbjct: 139 SEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGR---- 194
Query: 227 NTSRIVGTYGYMSPEYAIQGIFSIKSDVFSFGVLLLEIVSG 267
T + GT Y++PE + ++ D ++ GVL+ E+ +G
Sbjct: 195 -TWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|2GU8|A Chain A, Discovery Of 2-pyrimidyl-5-amidothiophenes As Novel And
Potent Inhibitors For Akt: Synthesis And Sar Studies
Length = 337
Score = 45.1 bits (105), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 57/221 (25%), Positives = 100/221 (45%), Gaps = 27/221 (12%)
Query: 68 SKKKEVDQLPLFSFSSVSTAT-NKFSDANKLGEGGFGPVYKGVLKK-GDEIAVKRLPGRS 125
+K KE D L + S +TA ++F LG G FG V K+ G+ A+K L +
Sbjct: 7 AKAKE-DFLKKWETPSQNTAQLDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQK 65
Query: 126 GQGLREMK---NEASVIAKVQHKNLVRLLGCCIDKDEKILIYEYMPNKSLDFFL------ 176
L++++ NE ++ V LV+L D ++ EY+ + L
Sbjct: 66 VVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRF 125
Query: 177 FDPTKR-----MLLDWSANYS-----SRLKVSNILLDKDINPKISDFGMARICGGNELQA 226
+P R ++L + +S LK N+L+D+ +++DFG A+ G
Sbjct: 126 SEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDEQGYIQVTDFGFAKRVKGR---- 181
Query: 227 NTSRIVGTYGYMSPEYAIQGIFSIKSDVFSFGVLLLEIVSG 267
T + GT Y++PE + ++ D ++ GVL+ E+ +G
Sbjct: 182 -TWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 221
>pdb|1J3H|A Chain A, Crystal Structure Of Apoenzyme Camp-Dependent Protein
Kinase Catalytic Subunit
pdb|1J3H|B Chain B, Crystal Structure Of Apoenzyme Camp-Dependent Protein
Kinase Catalytic Subunit
Length = 350
Score = 45.1 bits (105), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 57/221 (25%), Positives = 100/221 (45%), Gaps = 27/221 (12%)
Query: 68 SKKKEVDQLPLFSFSSVSTAT-NKFSDANKLGEGGFGPVYKGVLKK-GDEIAVKRLPGRS 125
+K KE D L + S +TA ++F LG G FG V K+ G+ A+K L +
Sbjct: 20 AKAKE-DFLKKWETPSQNTAQLDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQK 78
Query: 126 GQGLREMK---NEASVIAKVQHKNLVRLLGCCIDKDEKILIYEYMPNKSLDFFL------ 176
L++++ NE ++ V LV+L D ++ EY+ + L
Sbjct: 79 VVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRF 138
Query: 177 FDPTKR-----MLLDWSANYS-----SRLKVSNILLDKDINPKISDFGMARICGGNELQA 226
+P R ++L + +S LK N+L+D+ +++DFG A+ G
Sbjct: 139 SEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGR---- 194
Query: 227 NTSRIVGTYGYMSPEYAIQGIFSIKSDVFSFGVLLLEIVSG 267
T + GT Y++PE + ++ D ++ GVL+ E+ +G
Sbjct: 195 -TWXLXGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|3CQU|A Chain A, Crystal Structure Of Akt-1 Complexed With Substrate
Peptide And Inhibitor
pdb|3CQW|A Chain A, Crystal Structure Of Akt-1 Complexed With Substrate
Peptide And Inhibitor
pdb|3MV5|A Chain A, Crystal Structure Of Akt-1-Inhibitor Complexes
pdb|3MVH|A Chain A, Crystal Structure Of Akt-1-Inhibitor Complexes
Length = 342
Score = 45.1 bits (105), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 28/88 (31%), Positives = 45/88 (51%), Gaps = 4/88 (4%)
Query: 195 LKVSNILLDKDINPKISDFGMARICGGNELQANTSRIVGTYGYMSPEYAIQGIFSIKSDV 254
LK+ N++LDKD + KI+DFG+ + G + A GT Y++PE + D
Sbjct: 137 LKLENLMLDKDGHIKITDFGLCK--EGIKDGATMKXFCGTPEYLAPEVLEDNDYGRAVDW 194
Query: 255 FSFGVLLLEIVSGKKTTGFYRTDSLTLL 282
+ GV++ E++ G+ FY D L
Sbjct: 195 WGLGVVMYEMMCGR--LPFYNQDHEKLF 220
>pdb|1U54|A Chain A, Crystal Structures Of The Phosphorylated And
Unphosphorylated Kinase Domains Of The Cdc42-Associated
Tyrosine Kinase Ack1 Bound To Amp-Pcp
Length = 291
Score = 45.1 bits (105), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 53/198 (26%), Positives = 79/198 (39%), Gaps = 28/198 (14%)
Query: 95 NKLGEGGFGPVYKGVLK----KGDEIAVKRLPG---RSGQGLREMKNEASVIAKVQHKNL 147
KLG+G FG V +G K +AVK L + + + E + + + H+NL
Sbjct: 24 EKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNL 83
Query: 148 VRLLGCCIDKDEKILIYEYMPNKSLDFFLFDPTKRMLLDWSANYSSR------------- 194
+RL G + K ++ E P SL L LL + Y+ +
Sbjct: 84 IRLYGVVLTPPMK-MVTELAPLGSLLDRLRKHQGHFLLGTLSRYAVQVAEGMGYLESKRF 142
Query: 195 ----LKVSNILLDKDINPKISDFGMARICGGNELQA--NTSRIVGTYGYMSPEYAIQGIF 248
L N+LL KI DFG+ R N+ R V + + +PE F
Sbjct: 143 IHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHXVMQEHRKV-PFAWCAPESLKTRTF 201
Query: 249 SIKSDVFSFGVLLLEIVS 266
S SD + FGV L E+ +
Sbjct: 202 SHASDTWMFGVTLWEMFT 219
>pdb|4ID7|A Chain A, Ack1 Kinase In Complex With The Inhibitor
Cis-3-[8-amino-1-(4-
Phenoxyphenyl)imidazo[1,5-a]pyrazin-3-yl]cyclobutanol
Length = 273
Score = 45.1 bits (105), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 55/198 (27%), Positives = 80/198 (40%), Gaps = 28/198 (14%)
Query: 95 NKLGEGGFGPVYKGVLK----KGDEIAVKRL-PGRSGQ--GLREMKNEASVIAKVQHKNL 147
KLG+G FG V +G K +AVK L P Q + + E + + + H+NL
Sbjct: 14 EKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNL 73
Query: 148 VRLLGCCIDKDEKILIYEYMPNKSLDFFLFDPTKRMLLDWSANYSSR------------- 194
+RL G + K ++ E P SL L LL + Y+ +
Sbjct: 74 IRLYGVVLTPPMK-MVTELAPLGSLLDRLRKHQGHFLLGTLSRYAVQVAEGMGYLESKRF 132
Query: 195 ----LKVSNILLDKDINPKISDFGMARICGGNELQ--ANTSRIVGTYGYMSPEYAIQGIF 248
L N+LL KI DFG+ R N+ R V + + +PE F
Sbjct: 133 IHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRKV-PFAWCAPESLKTRTF 191
Query: 249 SIKSDVFSFGVLLLEIVS 266
S SD + FGV L E+ +
Sbjct: 192 SHASDTWMFGVTLWEMFT 209
>pdb|3OCB|A Chain A, Akt1 Kinase Domain With Pyrrolopyrimidine Inhibitor
pdb|3OCB|B Chain B, Akt1 Kinase Domain With Pyrrolopyrimidine Inhibitor
pdb|3OW4|A Chain A, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|3OW4|B Chain B, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|3QKK|A Chain A, Spirochromane Akt Inhibitors
pdb|3QKL|A Chain A, Spirochromane Akt Inhibitors
pdb|3QKM|A Chain A, Spirocyclic Sulfonamides As Akt Inhibitors
pdb|4EKK|A Chain A, Akt1 With Amp-Pnp
pdb|4EKK|B Chain B, Akt1 With Amp-Pnp
pdb|4EKL|A Chain A, Akt1 With Gdc0068
Length = 341
Score = 45.1 bits (105), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 28/88 (31%), Positives = 45/88 (51%), Gaps = 4/88 (4%)
Query: 195 LKVSNILLDKDINPKISDFGMARICGGNELQANTSRIVGTYGYMSPEYAIQGIFSIKSDV 254
LK+ N++LDKD + KI+DFG+ + G + A GT Y++PE + D
Sbjct: 136 LKLENLMLDKDGHIKITDFGLCK--EGIKDGATMKXFCGTPEYLAPEVLEDNDYGRAVDW 193
Query: 255 FSFGVLLLEIVSGKKTTGFYRTDSLTLL 282
+ GV++ E++ G+ FY D L
Sbjct: 194 WGLGVVMYEMMCGR--LPFYNQDHEKLF 219
>pdb|4HZR|A Chain A, Crystal Structure Of Ack1 Kinase Domain
pdb|4HZR|B Chain B, Crystal Structure Of Ack1 Kinase Domain
Length = 277
Score = 44.7 bits (104), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 55/198 (27%), Positives = 80/198 (40%), Gaps = 28/198 (14%)
Query: 95 NKLGEGGFGPVYKGVLK----KGDEIAVKRL-PGRSGQ--GLREMKNEASVIAKVQHKNL 147
KLG+G FG V +G K +AVK L P Q + + E + + + H+NL
Sbjct: 18 EKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNL 77
Query: 148 VRLLGCCIDKDEKILIYEYMPNKSLDFFLFDPTKRMLLDWSANYSSR------------- 194
+RL G + K ++ E P SL L LL + Y+ +
Sbjct: 78 IRLYGVVLTPPMK-MVTELAPLGSLLDRLRKHQGHFLLGTLSRYAVQVAEGMGYLESKRF 136
Query: 195 ----LKVSNILLDKDINPKISDFGMARICGGNELQ--ANTSRIVGTYGYMSPEYAIQGIF 248
L N+LL KI DFG+ R N+ R V + + +PE F
Sbjct: 137 IHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRKV-PFAWCAPESLKTRTF 195
Query: 249 SIKSDVFSFGVLLLEIVS 266
S SD + FGV L E+ +
Sbjct: 196 SHASDTWMFGVTLWEMFT 213
>pdb|3GI3|A Chain A, Crystal Structure Of A N-Phenyl-N'-Naphthylurea Analog In
Complex With P38 Map Kinase
Length = 360
Score = 44.7 bits (104), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 48/224 (21%), Positives = 100/224 (44%), Gaps = 31/224 (13%)
Query: 83 SVSTATNKFSDANKLGEGGFGPVYKGV-LKKGDEIAVKRL--PGRSGQGLREMKNEASVI 139
++ ++ + + +G G +G V K G +AVK+L P +S + E ++
Sbjct: 16 TIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLL 75
Query: 140 AKVQHKNLVRLLGC-----CIDKDEKILIYEYMPNKSLD--------------FFLFDPT 180
++H+N++ LL +++ + + ++ L+ F ++
Sbjct: 76 KHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQIL 135
Query: 181 KRMLLDWSANYSSR-LKVSNILLDKDINPKISDFGMARICGGNELQANTSRIVGTYGYMS 239
+ + SA+ R LK SN+ +++D KI DF +AR + V T Y +
Sbjct: 136 RGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFYLAR-----HTDDEMTGYVATRWYRA 190
Query: 240 PEYAIQGI-FSIKSDVFSFGVLLLEIVSGKKTTGFYRTDSLTLL 282
PE + + ++ D++S G ++ E+++G+ T F TD + L
Sbjct: 191 PEIMLNWMHYNQTVDIWSVGCIMAELLTGR--TLFPGTDHIDQL 232
>pdb|4GV1|A Chain A, Pkb Alpha In Complex With Azd5363
Length = 340
Score = 44.7 bits (104), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 28/88 (31%), Positives = 45/88 (51%), Gaps = 4/88 (4%)
Query: 195 LKVSNILLDKDINPKISDFGMARICGGNELQANTSRIVGTYGYMSPEYAIQGIFSIKSDV 254
LK+ N++LDKD + KI+DFG+ + G + A GT Y++PE + D
Sbjct: 135 LKLENLMLDKDGHIKITDFGLCK--EGIKDGATMKXFCGTPEYLAPEVLEDNDYGRAVDW 192
Query: 255 FSFGVLLLEIVSGKKTTGFYRTDSLTLL 282
+ GV++ E++ G+ FY D L
Sbjct: 193 WGLGVVMYEMMCGR--LPFYNQDHEKLF 218
>pdb|3DB6|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 902
pdb|3D5X|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Wortmannin.
pdb|3DBE|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 557
pdb|3DBF|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 562
Length = 301
Score = 44.7 bits (104), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 44/197 (22%), Positives = 84/197 (42%), Gaps = 32/197 (16%)
Query: 97 LGEGGFGPVYKGVLKKGDEIAVKRLPGRS----GQGLREMKNEASVIAKVQHKNLVRLLG 152
LG+GGF Y+ E+ ++ +S +M E ++ + + ++V G
Sbjct: 34 LGKGGFAKCYEITDMDTKEVFAGKVVPKSMLLKPHQKEKMSTEIAIHKSLDNPHVVGFHG 93
Query: 153 CCIDKDEKILIYEYMPNKSLDFFLFDPTKRMLLDWSANYSSR------------------ 194
D D ++ E +SL ++ + + A Y R
Sbjct: 94 FFEDDDFVYVVLEICRRRSL--LELHKRRKAVTEPEARYFMRQTIQGVQYLHNNRVIHRD 151
Query: 195 LKVSNILLDKDINPKISDFGMARICGGNELQANTSR---IVGTYGYMSPEYAIQGIFSIK 251
LK+ N+ L+ D++ KI DFG+A +++ + R + GT Y++PE + S +
Sbjct: 152 LKLGNLFLNDDMDVKIGDFGLA-----TKIEFDGERKKDLCGTPNYIAPEVLCKKGHSFE 206
Query: 252 SDVFSFGVLLLEIVSGK 268
D++S G +L ++ GK
Sbjct: 207 VDIWSLGCILYTLLVGK 223
>pdb|3D5U|A Chain A, Crystal Structure Of A Wildtype Polo-Like Kinase 1 (Plk1)
Catalytic Domain
Length = 317
Score = 44.7 bits (104), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 44/197 (22%), Positives = 84/197 (42%), Gaps = 32/197 (16%)
Query: 97 LGEGGFGPVYKGVLKKGDEIAVKRLPGRS----GQGLREMKNEASVIAKVQHKNLVRLLG 152
LG+GGF Y+ E+ ++ +S +M E ++ + + ++V G
Sbjct: 50 LGKGGFAKCYEITDMDTKEVFAGKVVPKSMLLKPHQKEKMSTEIAIHKSLDNPHVVGFHG 109
Query: 153 CCIDKDEKILIYEYMPNKSLDFFLFDPTKRMLLDWSANYSSR------------------ 194
D D ++ E +SL ++ + + A Y R
Sbjct: 110 FFEDDDFVYVVLEICRRRSL--LELHKRRKAVTEPEARYFMRQTIQGVQYLHNNRVIHRD 167
Query: 195 LKVSNILLDKDINPKISDFGMARICGGNELQANTSR---IVGTYGYMSPEYAIQGIFSIK 251
LK+ N+ L+ D++ KI DFG+A +++ + R + GT Y++PE + S +
Sbjct: 168 LKLGNLFLNDDMDVKIGDFGLA-----TKIEFDGERKKTLCGTPNYIAPEVLCKKGHSFE 222
Query: 252 SDVFSFGVLLLEIVSGK 268
D++S G +L ++ GK
Sbjct: 223 VDIWSLGCILYTLLVGK 239
>pdb|3D5V|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain.
pdb|3DB8|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 041
pdb|3DBC|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 257
pdb|3DBD|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 094
Length = 317
Score = 44.7 bits (104), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 44/197 (22%), Positives = 84/197 (42%), Gaps = 32/197 (16%)
Query: 97 LGEGGFGPVYKGVLKKGDEIAVKRLPGRS----GQGLREMKNEASVIAKVQHKNLVRLLG 152
LG+GGF Y+ E+ ++ +S +M E ++ + + ++V G
Sbjct: 50 LGKGGFAKCYEITDMDTKEVFAGKVVPKSMLLKPHQKEKMSTEIAIHKSLDNPHVVGFHG 109
Query: 153 CCIDKDEKILIYEYMPNKSLDFFLFDPTKRMLLDWSANYSSR------------------ 194
D D ++ E +SL ++ + + A Y R
Sbjct: 110 FFEDDDFVYVVLEICRRRSL--LELHKRRKAVTEPEARYFMRQTIQGVQYLHNNRVIHRD 167
Query: 195 LKVSNILLDKDINPKISDFGMARICGGNELQANTSR---IVGTYGYMSPEYAIQGIFSIK 251
LK+ N+ L+ D++ KI DFG+A +++ + R + GT Y++PE + S +
Sbjct: 168 LKLGNLFLNDDMDVKIGDFGLA-----TKIEFDGERKKDLCGTPNYIAPEVLCKKGHSFE 222
Query: 252 SDVFSFGVLLLEIVSGK 268
D++S G +L ++ GK
Sbjct: 223 VDIWSLGCILYTLLVGK 239
>pdb|2G01|A Chain A, Pyrazoloquinolones As Novel, Selective Jnk1 Inhibitors
pdb|2G01|B Chain B, Pyrazoloquinolones As Novel, Selective Jnk1 Inhibitors
pdb|2GMX|A Chain A, Selective Aminopyridine-Based C-Jun N-Terminal Kinase
Inhibitors With Cellular Activity
pdb|2GMX|B Chain B, Selective Aminopyridine-Based C-Jun N-Terminal Kinase
Inhibitors With Cellular Activity
pdb|2H96|A Chain A, Discovery Of Potent, Highly Selective, And Orally
Bioavailable Pyridine Carboxamide C-Jun Nh2-Terminal
Kinase Inhibitors
pdb|2H96|B Chain B, Discovery Of Potent, Highly Selective, And Orally
Bioavailable Pyridine Carboxamide C-Jun Nh2-Terminal
Kinase Inhibitors
pdb|2NO3|A Chain A, Novel 4-Anilinopyrimidines As Potent Jnk1 Inhibitors
pdb|2NO3|B Chain B, Novel 4-Anilinopyrimidines As Potent Jnk1 Inhibitors
Length = 370
Score = 44.7 bits (104), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 50/210 (23%), Positives = 91/210 (43%), Gaps = 29/210 (13%)
Query: 83 SVSTATNKFSDANKLGEGGFGPV---YKGVLKKGDEIAVKRL--PGRSGQGLREMKNEAS 137
S T ++ + +G G G V Y +L++ +A+K+L P ++ + E
Sbjct: 18 STFTVLKRYQNLKPIGSGAQGIVCAAYDAILERN--VAIKKLSRPFQNQTHAKRAYRELV 75
Query: 138 VIAKVQHKNLVRLLGC------------------CIDKDEKILIYEYMPNKSLDFFLFDP 179
++ V HKN++ LL +D + +I + ++ + + L+
Sbjct: 76 LMKCVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLCQVIQMELDHERMSYLLYQM 135
Query: 180 TKRMLLDWSANYSSR-LKVSNILLDKDINPKISDFGMARICGGNELQANTSRIVGTYGYM 238
+ SA R LK SNI++ D KI DFG+AR G + + +V Y Y
Sbjct: 136 LCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMM--EPEVVTRY-YR 192
Query: 239 SPEYAIQGIFSIKSDVFSFGVLLLEIVSGK 268
+PE + + D++S G ++ E+V K
Sbjct: 193 APEVILGMGYKENVDLWSVGCIMGEMVCHK 222
>pdb|1U46|A Chain A, Crystal Structure Of The Unphosphorylated Kinase Domain Of
The Tyrosine Kinase Ack1
pdb|1U46|B Chain B, Crystal Structure Of The Unphosphorylated Kinase Domain Of
The Tyrosine Kinase Ack1
pdb|1U4D|A Chain A, Structure Of The Ack1 Kinase Domain Bound To
Debromohymenialdisine
pdb|1U4D|B Chain B, Structure Of The Ack1 Kinase Domain Bound To
Debromohymenialdisine
pdb|1U54|B Chain B, Crystal Structures Of The Phosphorylated And
Unphosphorylated Kinase Domains Of The Cdc42-Associated
Tyrosine Kinase Ack1 Bound To Amp-Pcp
Length = 291
Score = 44.7 bits (104), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 53/198 (26%), Positives = 79/198 (39%), Gaps = 28/198 (14%)
Query: 95 NKLGEGGFGPVYKGVLK----KGDEIAVKRLPG---RSGQGLREMKNEASVIAKVQHKNL 147
KLG+G FG V +G K +AVK L + + + E + + + H+NL
Sbjct: 24 EKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNL 83
Query: 148 VRLLGCCIDKDEKILIYEYMPNKSLDFFLFDPTKRMLLDWSANYSSR------------- 194
+RL G + K ++ E P SL L LL + Y+ +
Sbjct: 84 IRLYGVVLTPPMK-MVTELAPLGSLLDRLRKHQGHFLLGTLSRYAVQVAEGMGYLESKRF 142
Query: 195 ----LKVSNILLDKDINPKISDFGMARICGGNELQ--ANTSRIVGTYGYMSPEYAIQGIF 248
L N+LL KI DFG+ R N+ R V + + +PE F
Sbjct: 143 IHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRKV-PFAWCAPESLKTRTF 201
Query: 249 SIKSDVFSFGVLLLEIVS 266
S SD + FGV L E+ +
Sbjct: 202 SHASDTWMFGVTLWEMFT 219
>pdb|3D5W|A Chain A, Crystal Structure Of A Phosphorylated Polo-Like Kinase 1
(Plk1) Catalytic Domain In Complex With Adp
Length = 317
Score = 44.7 bits (104), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 44/197 (22%), Positives = 84/197 (42%), Gaps = 32/197 (16%)
Query: 97 LGEGGFGPVYKGVLKKGDEIAVKRLPGRS----GQGLREMKNEASVIAKVQHKNLVRLLG 152
LG+GGF Y+ E+ ++ +S +M E ++ + + ++V G
Sbjct: 50 LGKGGFAKCYEITDMDTKEVFAGKVVPKSMLLKPHQKEKMSTEIAIHKSLDNPHVVGFHG 109
Query: 153 CCIDKDEKILIYEYMPNKSLDFFLFDPTKRMLLDWSANYSSR------------------ 194
D D ++ E +SL ++ + + A Y R
Sbjct: 110 FFEDDDFVYVVLEICRRRSL--LELHKRRKAVTEPEARYFMRQTIQGVQYLHNNRVIHRD 167
Query: 195 LKVSNILLDKDINPKISDFGMARICGGNELQANTSR---IVGTYGYMSPEYAIQGIFSIK 251
LK+ N+ L+ D++ KI DFG+A +++ + R + GT Y++PE + S +
Sbjct: 168 LKLGNLFLNDDMDVKIGDFGLA-----TKIEFDGERKKXLCGTPNYIAPEVLCKKGHSFE 222
Query: 252 SDVFSFGVLLLEIVSGK 268
D++S G +L ++ GK
Sbjct: 223 VDIWSLGCILYTLLVGK 239
>pdb|1YDT|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H89 Protein
Kinase Inhibitor N-[2-
(4-Bromocinnamylamino)ethyl]-5-Isoquinoline
pdb|1YDR|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H7 Protein
Kinase Inhibitor 1-(5-
Isoquinolinesulfonyl)-2-Methylpiperazine
pdb|1YDS|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H8 Protein
Kinase Inhibitor [n-(2-Methylamino)ethyl]-5-
Isoquinolinesulfonamide
Length = 350
Score = 44.7 bits (104), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 48/199 (24%), Positives = 89/199 (44%), Gaps = 25/199 (12%)
Query: 89 NKFSDANKLGEGGFGPVY-KGVLKKGDEIAVKRLPGRSGQGLREMK---NEASVIAKVQH 144
++F LG G FG V ++ G+ A+K L + L++++ NE ++ V
Sbjct: 41 DQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 100
Query: 145 KNLVRLLGCCIDKDEKILIYEYMPNKSLDFFL------FDPTKR-----MLLDWSANYS- 192
LV+L D ++ EY+ + L +P R ++L + +S
Sbjct: 101 PFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSL 160
Query: 193 ----SRLKVSNILLDKDINPKISDFGMARICGGNELQANTSRIVGTYGYMSPEYAIQGIF 248
LK N+L+D+ +++DFG A+ G T + GT Y++PE + +
Sbjct: 161 DLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGR-----TWXLCGTPEYLAPEIILSKGY 215
Query: 249 SIKSDVFSFGVLLLEIVSG 267
+ D ++ GVL+ E+ +G
Sbjct: 216 NKAVDWWALGVLIYEMAAG 234
>pdb|4FG9|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-320 In Complex With Atp
pdb|4FG9|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-320 In Complex With Atp
pdb|4FGB|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I Apo Form
Length = 320
Score = 44.3 bits (103), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 55/198 (27%), Positives = 84/198 (42%), Gaps = 36/198 (18%)
Query: 97 LGEGGFGPVYKGVLKKGDE------IAVKRLPGRSGQGLREMKNEASVIAKVQHKNLVRL 150
LG G F V K+ + IA + L G+ G M+NE +V+ K++H N+V L
Sbjct: 26 LGTGAFSEVILAEDKRTQKLVAIKCIAKEALEGKEGS----MENEIAVLHKIKHPNIVAL 81
Query: 151 L------------------GCCIDKDEKILIYEYMPNKSLDFFLFDPTKRMLLDWSANYS 192
G D+ + Y L F + D K L D +
Sbjct: 82 DDIYESGGHLYLIMQLVSGGELFDRIVEKGFYTERDASRLIFQVLDAVK-YLHDLGIVHR 140
Query: 193 SRLKVSNIL---LDKDINPKISDFGMARICGGNELQANTSRIVGTYGYMSPEYAIQGIFS 249
LK N+L LD+D ISDFG++++ + + S GT GY++PE Q +S
Sbjct: 141 D-LKPENLLYYSLDEDSKIMISDFGLSKM---EDPGSVLSTACGTPGYVAPEVLAQKPYS 196
Query: 250 IKSDVFSFGVLLLEIVSG 267
D +S GV+ ++ G
Sbjct: 197 KAVDCWSIGVIAYILLCG 214
>pdb|4DFY|A Chain A, Crystal Structure Of R194a Mutant Of Camp-Dependent
Protein Kinase With Unphosphorylated Activation Loop
pdb|4DFY|E Chain E, Crystal Structure Of R194a Mutant Of Camp-Dependent
Protein Kinase With Unphosphorylated Activation Loop
Length = 371
Score = 44.3 bits (103), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 57/221 (25%), Positives = 100/221 (45%), Gaps = 27/221 (12%)
Query: 68 SKKKEVDQLPLFSFSSVSTAT-NKFSDANKLGEGGFGPVYKGVLKK-GDEIAVKRLPGRS 125
+K KE D L + S +TA ++F LG G FG V K+ G+ A+K L +
Sbjct: 41 AKAKE-DFLKKWETPSQNTAQLDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQK 99
Query: 126 GQGLREMK---NEASVIAKVQHKNLVRLLGCCIDKDEKILIYEYMPNKSLDFFL------ 176
L++++ NE ++ V LV+L D ++ EY+ + L
Sbjct: 100 VVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRF 159
Query: 177 FDPTKR-----MLLDWSANYS-----SRLKVSNILLDKDINPKISDFGMARICGGNELQA 226
+P R ++L + +S LK N+L+D+ +++DFG A+ G
Sbjct: 160 SEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGA---- 215
Query: 227 NTSRIVGTYGYMSPEYAIQGIFSIKSDVFSFGVLLLEIVSG 267
T + GT Y++PE + ++ D ++ GVL+ E+ +G
Sbjct: 216 -TWTLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 255
>pdb|3GCP|A Chain A, Human P38 Map Kinase In Complex With Sb203580
pdb|3GCQ|A Chain A, Human P38 Map Kinase In Complex With Rl45
pdb|3GCS|A Chain A, Human P38 Map Kinase In Complex With Sorafenib
pdb|3GCV|A Chain A, Human P38 Map Kinase In Complex With Rl62
pdb|3HV3|A Chain A, Human P38 Map Kinase In Complex With Rl49
pdb|3IW5|A Chain A, Human P38 Map Kinase In Complex With An Indole Derivative
pdb|3IW6|A Chain A, Human P38 Map Kinase In Complex With A Benzylpiperazin-
Pyrrol
pdb|3IW7|A Chain A, Human P38 Map Kinase In Complex With An Imidazo-Pyridine
pdb|3IW8|A Chain A, Structure Of Inactive Human P38 Map Kinase In Complex With
A Thiazole-Urea
pdb|3HUB|A Chain A, Human P38 Map Kinase In Complex With Scios-469
pdb|3L8S|A Chain A, Human P38 Map Kinase In Complex With Cp-547632
pdb|3LFB|A Chain A, Human P38 Map Kinase In Complex With Rl98
pdb|3LFC|A Chain A, Human P38 Map Kinase In Complex With Rl99
pdb|3LFD|A Chain A, Human P38 Map Kinase In Complex With Rl113
pdb|3LFE|A Chain A, Human P38 Map Kinase In Complex With Rl116
pdb|3LFF|A Chain A, Human P38 Map Kinase In Complex With Rl166
pdb|3PG3|A Chain A, Human P38 Map Kinase In Complex With Rl182
Length = 360
Score = 44.3 bits (103), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 48/224 (21%), Positives = 100/224 (44%), Gaps = 31/224 (13%)
Query: 83 SVSTATNKFSDANKLGEGGFGPVYKGV-LKKGDEIAVKRL--PGRSGQGLREMKNEASVI 139
++ ++ + + +G G +G V K G +AVK+L P +S + E ++
Sbjct: 16 TIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLL 75
Query: 140 AKVQHKNLVRLLGC-----CIDKDEKILIYEYMPNKSLD--------------FFLFDPT 180
++H+N++ LL +++ + + ++ L+ F ++
Sbjct: 76 KHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKSQKLTDDHVQFLIYQIL 135
Query: 181 KRMLLDWSANYSSR-LKVSNILLDKDINPKISDFGMARICGGNELQANTSRIVGTYGYMS 239
+ + SA+ R LK SN+ +++D KI DFG+ R + V T Y +
Sbjct: 136 RGLKYIHSADIIHRDLKPSNLAVNEDSELKILDFGLCR-----HTDDEMTGYVATRWYRA 190
Query: 240 PEYAIQGI-FSIKSDVFSFGVLLLEIVSGKKTTGFYRTDSLTLL 282
PE + + ++ D++S G ++ E+++G+ T F TD + L
Sbjct: 191 PEIMLNWMHYNQTVDIWSVGCIMAELLTGR--TLFPGTDHIDQL 232
>pdb|4FG8|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-315 In Complex With Atp
pdb|4FG8|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-315 In Complex With Atp
Length = 315
Score = 43.9 bits (102), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 55/198 (27%), Positives = 84/198 (42%), Gaps = 36/198 (18%)
Query: 97 LGEGGFGPVYKGVLKKGDE------IAVKRLPGRSGQGLREMKNEASVIAKVQHKNLVRL 150
LG G F V K+ + IA + L G+ G M+NE +V+ K++H N+V L
Sbjct: 26 LGTGAFSEVILAEDKRTQKLVAIKCIAKEALEGKEGS----MENEIAVLHKIKHPNIVAL 81
Query: 151 ------------------LGCCIDKDEKILIYEYMPNKSLDFFLFDPTKRMLLDWSANYS 192
G D+ + Y L F + D K L D +
Sbjct: 82 DDIYESGGHLYLIMQLVSGGELFDRIVEKGFYTERDASRLIFQVLDAVK-YLHDLGIVHR 140
Query: 193 SRLKVSNIL---LDKDINPKISDFGMARICGGNELQANTSRIVGTYGYMSPEYAIQGIFS 249
LK N+L LD+D ISDFG++++ + + S GT GY++PE Q +S
Sbjct: 141 D-LKPENLLYYSLDEDSKIMISDFGLSKM---EDPGSVLSTACGTPGYVAPEVLAQKPYS 196
Query: 250 IKSDVFSFGVLLLEIVSG 267
D +S GV+ ++ G
Sbjct: 197 KAVDCWSIGVIAYILLCG 214
>pdb|4FG7|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-293 In Complex With Atp
Length = 293
Score = 43.9 bits (102), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 55/198 (27%), Positives = 84/198 (42%), Gaps = 36/198 (18%)
Query: 97 LGEGGFGPVYKGVLKKGDE------IAVKRLPGRSGQGLREMKNEASVIAKVQHKNLVRL 150
LG G F V K+ + IA + L G+ G M+NE +V+ K++H N+V L
Sbjct: 26 LGTGAFSEVILAEDKRTQKLVAIKCIAKEALEGKEGS----MENEIAVLHKIKHPNIVAL 81
Query: 151 ------------------LGCCIDKDEKILIYEYMPNKSLDFFLFDPTKRMLLDWSANYS 192
G D+ + Y L F + D K L D +
Sbjct: 82 DDIYESGGHLYLIMQLVSGGELFDRIVEKGFYTERDASRLIFQVLDAVK-YLHDLGIVHR 140
Query: 193 SRLKVSNIL---LDKDINPKISDFGMARICGGNELQANTSRIVGTYGYMSPEYAIQGIFS 249
LK N+L LD+D ISDFG++++ + + S GT GY++PE Q +S
Sbjct: 141 D-LKPENLLYYSLDEDSKIMISDFGLSKM---EDPGSVLSTACGTPGYVAPEVLAQKPYS 196
Query: 250 IKSDVFSFGVLLLEIVSG 267
D +S GV+ ++ G
Sbjct: 197 KAVDCWSIGVIAYILLCG 214
>pdb|1SYK|A Chain A, Crystal Structure Of E230q Mutant Of Camp-Dependent
Protein Kinase Reveals Unexpected Apoenzyme Conformation
pdb|1SYK|B Chain B, Crystal Structure Of E230q Mutant Of Camp-Dependent
Protein Kinase Reveals Unexpected Apoenzyme Conformation
Length = 350
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 56/221 (25%), Positives = 100/221 (45%), Gaps = 27/221 (12%)
Query: 68 SKKKEVDQLPLFSFSSVSTAT-NKFSDANKLGEGGFGPVYKGVLKK-GDEIAVKRLPGRS 125
+K KE D L + S +TA ++F LG G FG V K+ G+ A+K L +
Sbjct: 20 AKAKE-DFLKKWETPSQNTAQLDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQK 78
Query: 126 GQGLREMK---NEASVIAKVQHKNLVRLLGCCIDKDEKILIYEYMPNKSLDFFL------ 176
L++++ NE ++ V LV+L D ++ EY+ + L
Sbjct: 79 VVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRF 138
Query: 177 FDPTKR-----MLLDWSANYS-----SRLKVSNILLDKDINPKISDFGMARICGGNELQA 226
+P R ++L + +S LK N+L+D+ +++DFG A+ G
Sbjct: 139 SEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGR---- 194
Query: 227 NTSRIVGTYGYMSPEYAIQGIFSIKSDVFSFGVLLLEIVSG 267
T + GT Y++PE + ++ D ++ GVL+ ++ +G
Sbjct: 195 -TWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYQMAAG 234
>pdb|3O8P|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
pdb|3MPA|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 48/224 (21%), Positives = 100/224 (44%), Gaps = 31/224 (13%)
Query: 83 SVSTATNKFSDANKLGEGGFGPVYKGV-LKKGDEIAVKRL--PGRSGQGLREMKNEASVI 139
++ ++ + + +G G +G V K G +AVK+L P +S + E ++
Sbjct: 16 TIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLL 75
Query: 140 AKVQHKNLVRLLGC-----CIDKDEKILIYEYMPNKSLD--------------FFLFDPT 180
++H+N++ LL +++ + + ++ L+ F ++
Sbjct: 76 KHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQIL 135
Query: 181 KRMLLDWSANYSSR-LKVSNILLDKDINPKISDFGMARICGGNELQANTSRIVGTYGYMS 239
+ + SA+ R LK SN+ +++D KI FG+AR + V T Y +
Sbjct: 136 RGLKYIHSADIIHRDLKPSNLAVNEDCELKILGFGLAR-----HTDDEMTGYVATRWYRA 190
Query: 240 PEYAIQGI-FSIKSDVFSFGVLLLEIVSGKKTTGFYRTDSLTLL 282
PE + + ++ D++S G ++ E+++G+ T F TD + L
Sbjct: 191 PEIMLNWMHYNQTVDIWSVGCIMAELLTGR--TLFPGTDHIDQL 232
>pdb|3A62|A Chain A, Crystal Structure Of Phosphorylated P70s6k1
Length = 327
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 49/200 (24%), Positives = 88/200 (44%), Gaps = 36/200 (18%)
Query: 97 LGEGGFGPVYKGVLKK------GDEIAVKRLPG----RSGQGLREMKNEASVIAKVQHKN 146
LG+GG+G V++ ++K G A+K L R+ + K E +++ +V+H
Sbjct: 25 LGKGGYGKVFQ--VRKVTGANTGKIFAMKVLKKAMIVRNAKDTAHTKAERNILEEVKHPF 82
Query: 147 LVRLLGCCIDKDEKILIYEYMPNKSLDFFLFDPTKRMLLDWSANYSSR------------ 194
+V L+ + LI EY+ L F + + D + Y +
Sbjct: 83 IVDLIYAFQTGGKLYLILEYLSGGEL-FMQLEREGIFMEDTACFYLAEISMALGHLHQKG 141
Query: 195 -----LKVSNILLDKDINPKISDFGMAR--ICGGNELQANTSRIVGTYGYMSPEYAIQGI 247
LK NI+L+ + K++DFG+ + I G T GT YM+PE ++
Sbjct: 142 IIYRDLKPENIMLNHQGHVKLTDFGLCKESIHDGT----VTHXFCGTIEYMAPEILMRSG 197
Query: 248 FSIKSDVFSFGVLLLEIVSG 267
+ D +S G L+ ++++G
Sbjct: 198 HNRAVDWWSLGALMYDMLTG 217
>pdb|1KOA|A Chain A, Twitchin Kinase Fragment (C.Elegans), Autoregulated
Protein Kinase And Immunoglobulin Domains
Length = 491
Score = 43.5 bits (101), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 47/193 (24%), Positives = 81/193 (41%), Gaps = 25/193 (12%)
Query: 96 KLGEGGFGPVYKGVLKK-GDEIAVKRLPGRSGQGLREMKNEASVIAKVQHKNLVRLLGCC 154
+LG G FG V++ + G+ A K + ++ E ++ ++H LV L
Sbjct: 58 ELGTGAFGVVHRVTERATGNNFAAKFVMTPHESDKETVRKEIQTMSVLRHPTLVNLHDAF 117
Query: 155 IDKDEKILIYEYMPNKSLDFFLFDPTKRMLLDWSANYSSR-----------------LKV 197
D +E ++IYE+M L + D +M D + Y + LK
Sbjct: 118 EDDNEMVMIYEFMSGGELFEKVADEHNKMSEDEAVEYMRQVCKGLCHMHENNYVHLDLKP 177
Query: 198 SNILL--DKDINPKISDFGM-ARICGGNELQANTSRIVGTYGYMSPEYAIQGIFSIKSDV 254
NI+ + K+ DFG+ A + ++ T GT + +PE A +D+
Sbjct: 178 ENIMFTTKRSNELKLIDFGLTAHLDPKQSVKVTT----GTAEFAAPEVAEGKPVGYYTDM 233
Query: 255 FSFGVLLLEIVSG 267
+S GVL ++SG
Sbjct: 234 WSVGVLSYILLSG 246
>pdb|3A60|A Chain A, Crystal Structure Of Unphosphorylated P70s6k1 (Form I)
pdb|3A60|B Chain B, Crystal Structure Of Unphosphorylated P70s6k1 (Form I)
pdb|3A61|A Chain A, Crystal Structure Of Unphosphorylated P70s6k1 (Form Ii)
Length = 327
Score = 43.5 bits (101), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 49/200 (24%), Positives = 88/200 (44%), Gaps = 36/200 (18%)
Query: 97 LGEGGFGPVYKGVLKK------GDEIAVKRLPG----RSGQGLREMKNEASVIAKVQHKN 146
LG+GG+G V++ ++K G A+K L R+ + K E +++ +V+H
Sbjct: 25 LGKGGYGKVFQ--VRKVTGANTGKIFAMKVLKKAMIVRNAKDTAHTKAERNILEEVKHPF 82
Query: 147 LVRLLGCCIDKDEKILIYEYMPNKSLDFFLFDPTKRMLLDWSANYSSR------------ 194
+V L+ + LI EY+ L F + + D + Y +
Sbjct: 83 IVDLIYAFQTGGKLYLILEYLSGGEL-FMQLEREGIFMEDTACFYLAEISMALGHLHQKG 141
Query: 195 -----LKVSNILLDKDINPKISDFGMAR--ICGGNELQANTSRIVGTYGYMSPEYAIQGI 247
LK NI+L+ + K++DFG+ + I G T GT YM+PE ++
Sbjct: 142 IIYRDLKPENIMLNHQGHVKLTDFGLCKESIHDGT----VTHTFCGTIEYMAPEILMRSG 197
Query: 248 FSIKSDVFSFGVLLLEIVSG 267
+ D +S G L+ ++++G
Sbjct: 198 HNRAVDWWSLGALMYDMLTG 217
>pdb|4EC8|A Chain A, Structure Of Full Length Cdk9 In Complex With Cyclint And
Drb
pdb|4EC9|A Chain A, Crystal Structure Of Full-Length Cdk9 In Complex With
Cyclin T
Length = 373
Score = 43.5 bits (101), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 51/213 (23%), Positives = 101/213 (47%), Gaps = 42/213 (19%)
Query: 88 TNKFSDANKLGEGGFGPVYKGVLKK-GDEIAVKRL------PGRSGQGLREMKNEASVIA 140
+K+ K+G+G FG V+K +K G ++A+K++ G LRE+K ++
Sbjct: 17 VSKYEKLAKIGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIK----ILQ 72
Query: 141 KVQHKNLVRLLGCCIDKDEK--------ILIYEY--------MPNKSLDFFLFDPTK--R 182
++H+N+V L+ C K L++++ + N + F L + + +
Sbjct: 73 LLKHENVVNLIEICRTKASPYNRCKGSIYLVFDFCEHDLAGLLSNVLVKFTLSEIKRVMQ 132
Query: 183 MLLDWSANYSSR-------LKVSNILLDKDINPKISDFGMAR---ICGGNELQANTSRIV 232
MLL+ Y R +K +N+L+ +D K++DFG+AR + ++ +R+V
Sbjct: 133 MLLN-GLYYIHRNKILHRDMKAANVLITRDGVLKLADFGLARAFSLAKNSQPNRYXNRVV 191
Query: 233 GTYGYMSPEYAI-QGIFSIKSDVFSFGVLLLEI 264
T Y PE + + + D++ G ++ E+
Sbjct: 192 -TLWYRPPELLLGERDYGPPIDLWGAGCIMAEM 223
>pdb|3UTO|A Chain A, Twitchin Kinase Region From C.Elegans
(Fn31-Nl-Kin-Crd-Ig26)
pdb|3UTO|B Chain B, Twitchin Kinase Region From C.Elegans
(Fn31-Nl-Kin-Crd-Ig26)
Length = 573
Score = 43.5 bits (101), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 47/193 (24%), Positives = 81/193 (41%), Gaps = 25/193 (12%)
Query: 96 KLGEGGFGPVYKGVLKK-GDEIAVKRLPGRSGQGLREMKNEASVIAKVQHKNLVRLLGCC 154
+LG G FG V++ + G+ A K + ++ E ++ ++H LV L
Sbjct: 164 ELGTGAFGVVHRVTERATGNNFAAKFVMTPHESDKETVRKEIQTMSVLRHPTLVNLHDAF 223
Query: 155 IDKDEKILIYEYMPNKSLDFFLFDPTKRMLLDWSANYSSR-----------------LKV 197
D +E ++IYE+M L + D +M D + Y + LK
Sbjct: 224 EDDNEMVMIYEFMSGGELFEKVADEHNKMSEDEAVEYMRQVCKGLCHMHENNYVHLDLKP 283
Query: 198 SNILL--DKDINPKISDFGM-ARICGGNELQANTSRIVGTYGYMSPEYAIQGIFSIKSDV 254
NI+ + K+ DFG+ A + ++ T GT + +PE A +D+
Sbjct: 284 ENIMFTTKRSNELKLIDFGLTAHLDPKQSVKVTT----GTAEFAAPEVAEGKPVGYYTDM 339
Query: 255 FSFGVLLLEIVSG 267
+S GVL ++SG
Sbjct: 340 WSVGVLSYILLSG 352
>pdb|3MH0|A Chain A, Mutagenesis Of P38 Map Kinase Eshtablishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3O8T|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg-Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 43.5 bits (101), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 48/224 (21%), Positives = 100/224 (44%), Gaps = 31/224 (13%)
Query: 83 SVSTATNKFSDANKLGEGGFGPVYKGV-LKKGDEIAVKRL--PGRSGQGLREMKNEASVI 139
++ ++ + + +G G +G V K G +AVK+L P +S + E ++
Sbjct: 16 TIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLL 75
Query: 140 AKVQHKNLVRLLGC-----CIDKDEKILIYEYMPNKSLD--------------FFLFDPT 180
++H+N++ LL +++ + + ++ L+ F ++
Sbjct: 76 KHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQIL 135
Query: 181 KRMLLDWSANYSSR-LKVSNILLDKDINPKISDFGMARICGGNELQANTSRIVGTYGYMS 239
+ + SA+ R LK SN+ +++D KI D G+AR + V T Y +
Sbjct: 136 RGLKYIHSADIIHRDLKPSNLAVNEDCELKILDAGLAR-----HTDDEMTGYVATRWYRA 190
Query: 240 PEYAIQGI-FSIKSDVFSFGVLLLEIVSGKKTTGFYRTDSLTLL 282
PE + + ++ D++S G ++ E+++G+ T F TD + L
Sbjct: 191 PEIMLNWMHYNQTVDIWSVGCIMAELLTGR--TLFPGTDHIDQL 232
>pdb|3C0G|A Chain A, Cask Cam-kinase Domain- 3'-amp Complex, P1 Form
pdb|3C0G|B Chain B, Cask Cam-kinase Domain- 3'-amp Complex, P1 Form
pdb|3C0H|A Chain A, Cask Cam-Kinase Domain- Amppnp Complex, P1 Form
pdb|3C0H|B Chain B, Cask Cam-Kinase Domain- Amppnp Complex, P1 Form
pdb|3C0I|A Chain A, Cask Cam-Kinase Domain- 3'-Amp Complex, P212121 Form
Length = 351
Score = 43.5 bits (101), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 46/200 (23%), Positives = 84/200 (42%), Gaps = 31/200 (15%)
Query: 97 LGEGGFGPVYKGVLKK-GDEIAVK-----RLPGRSGQGLREMKNEASVIAKVQHKNLVRL 150
+G+G F V + + ++ G + AVK + G ++K EAS+ ++H ++V L
Sbjct: 32 IGKGPFSVVRRCINRETGQQFAVKIVDVAKFTSSPGLSTEDLKREASICHMLKHPHIVEL 91
Query: 151 LGCCIDKDEKILIYEYMPNKSLDFFLFDPTKRMLLDWSANYSSRLKV---------SNIL 201
L +++E+M L F + + A S ++ N +
Sbjct: 92 LETYSSDGMLYMVFEFMDGADLCFEIVKRADAGFVYSEAVASHYMRQILEALRYCHDNNI 151
Query: 202 LDKDINP--------------KISDFGMARICGGNELQANTSRIVGTYGYMSPEYAIQGI 247
+ +D+ P K+ FG+A G + L A VGT +M+PE +
Sbjct: 152 IHRDVKPHCVLLASKENSAPVKLGGFGVAIQLGESGLVAGGR--VGTPHFMAPEVVKREP 209
Query: 248 FSIKSDVFSFGVLLLEIVSG 267
+ DV+ GV+L ++SG
Sbjct: 210 YGKPVDVWGCGVILFILLSG 229
>pdb|3TAC|A Chain A, Crystal Structure Of The Liprin-AlphaCASK COMPLEX
Length = 361
Score = 43.5 bits (101), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 46/200 (23%), Positives = 84/200 (42%), Gaps = 31/200 (15%)
Query: 97 LGEGGFGPVYKGVLKK-GDEIAVK-----RLPGRSGQGLREMKNEASVIAKVQHKNLVRL 150
+G+G F V + + ++ G + AVK + G ++K EAS+ ++H ++V L
Sbjct: 34 IGKGPFSVVRRCINRETGQQFAVKIVDVAKFTSSPGLSTEDLKREASICHMLKHPHIVEL 93
Query: 151 LGCCIDKDEKILIYEYMPNKSLDFFLFDPTKRMLLDWSANYSSRLKV---------SNIL 201
L +++E+M L F + + A S ++ N +
Sbjct: 94 LETYSSDGMLYMVFEFMDGADLCFEIVKRADAGFVYSEAVASHYMRQILEALRYCHDNNI 153
Query: 202 LDKDINP--------------KISDFGMARICGGNELQANTSRIVGTYGYMSPEYAIQGI 247
+ +D+ P K+ FG+A G + L A VGT +M+PE +
Sbjct: 154 IHRDVKPHCVLLASKENSAPVKLGGFGVAIQLGESGLVAGGR--VGTPHFMAPEVVKREP 211
Query: 248 FSIKSDVFSFGVLLLEIVSG 267
+ DV+ GV+L ++SG
Sbjct: 212 YGKPVDVWGCGVILFILLSG 231
>pdb|4FR4|A Chain A, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|B Chain B, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|C Chain C, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|D Chain D, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|E Chain E, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|F Chain F, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
Length = 384
Score = 43.5 bits (101), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 52/206 (25%), Positives = 92/206 (44%), Gaps = 30/206 (14%)
Query: 89 NKFSDANKLGEGGFGPVYKGVLKKGDE---IAVKRLPGRSGQGLREMKN---EASVIAKV 142
+ F +G+G FG V +++K D A+K + + E++N E ++ +
Sbjct: 15 DHFEILRAIGKGSFGKV--CIVQKNDTKKMYAMKYMNKQKCVERNEVRNVFKELQIMQGL 72
Query: 143 QHKNLVRLLGCCIDKDEKILIYEYMPNKSLDFFL-------------FDPTKRMLLDWSA 189
+H LV L D+++ ++ + + L + L F M LD+
Sbjct: 73 EHPFLVNLWYSFQDEEDMFMVVDLLLGGDLRYHLQQNVHFKEETVKLFICELVMALDYLQ 132
Query: 190 NY---SSRLKVSNILLDKDINPKISDFGMARICGGNELQANTSRIVGTYGYMSPEY--AI 244
N +K NILLD+ + I+DF +A + E Q T + GT YM+PE +
Sbjct: 133 NQRIIHRDMKPDNILLDEHGHVHITDFNIAAML-PRETQITT--MAGTKPYMAPEMFSSR 189
Query: 245 QGI-FSIKSDVFSFGVLLLEIVSGKK 269
+G +S D +S GV E++ G++
Sbjct: 190 KGAGYSFAVDWWSLGVTAYELLRGRR 215
>pdb|1O6L|A Chain A, Crystal Structure Of An Activated Akt/protein Kinase B
(pkb-pif Chimera) Ternary Complex With Amp-pnp And Gsk3
Peptide
Length = 337
Score = 43.1 bits (100), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 27/88 (30%), Positives = 44/88 (50%), Gaps = 4/88 (4%)
Query: 195 LKVSNILLDKDINPKISDFGMARICGGNELQANTSRIVGTYGYMSPEYAIQGIFSIKSDV 254
+K+ N++LDKD + KI+DFG+ + G A GT Y++PE + D
Sbjct: 131 IKLENLMLDKDGHIKITDFGLCK--EGISDGATMKXFCGTPEYLAPEVLEDNDYGRAVDW 188
Query: 255 FSFGVLLLEIVSGKKTTGFYRTDSLTLL 282
+ GV++ E++ G+ FY D L
Sbjct: 189 WGLGVVMYEMMCGR--LPFYNQDHERLF 214
>pdb|3CEK|A Chain A, Crystal Structure Of Human Dual Specificity Protein Kinase
(ttk)
pdb|3GFW|A Chain A, Crystal Structure Of Human Dual Specificity Protein Kinase
(Ttk) In Complex With A Pyrolo-Pyridin Ligand
Length = 313
Score = 43.1 bits (100), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 62/225 (27%), Positives = 99/225 (44%), Gaps = 45/225 (20%)
Query: 81 FSSVSTATNKFSDANKLGEGGFGPVYKGVLKKGDEIAVK--RLPGRSGQGLREMKNEASV 138
F S+S +S ++G GG V++ + +K A+K L Q L +NE +
Sbjct: 20 FQSMSVKGRIYSILKQIGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAY 79
Query: 139 IAKVQHKN--LVRLLGCCIDKDEKILIYEYMPNKSLDFFL-----FDPTKR------ML- 184
+ K+Q + ++RL I D+ I + N L+ +L DP +R ML
Sbjct: 80 LNKLQQHSDKIIRLYDYEI-TDQYIYMVMECGNIDLNSWLKKKKSIDPWERKSYWKNMLE 138
Query: 185 ----LDWSANYSSRLKVSNILLDKDINPKISDFGMARICGGNELQANTSRI-----VGTY 235
+ S LK +N L+ D K+ DFG+A N++Q +T+ + VGT
Sbjct: 139 AVHTIHQHGIVHSDLKPANFLI-VDGMLKLIDFGIA-----NQMQPDTTSVVKDSQVGTV 192
Query: 236 GYMSPEYAIQGIFSIKS------------DVFSFGVLLLEIVSGK 268
YM PE AI+ + S + DV+S G +L + GK
Sbjct: 193 NYMPPE-AIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGK 236
>pdb|2JDO|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With
Isoquinoline-5- Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl) Amide
pdb|2JDR|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With The Inhibitor
A- 443654
pdb|2UW9|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With 4-(4-Chloro-
Phenyl)-4-(4-(1h-Pyrazol-4-Yl)-Phenyl)-Piperidine
pdb|2X39|A Chain A, Structure Of
4-Amino-N-(4-Chlorobenzyl)-1-(7h-Pyrrolo(2,3-D)
Pyrimidin-4-Yl)piperidine-4-Carboxamide Bound To Pkb
pdb|2XH5|A Chain A, Structure Of 4-(4-Tert-Butylbenzyl)-1-(7h-Pyrrolo(2,3-D)
Pyrimidin-4-Yl)piperidin-4-Amine Bound To Pkb
Length = 342
Score = 43.1 bits (100), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 27/88 (30%), Positives = 44/88 (50%), Gaps = 4/88 (4%)
Query: 195 LKVSNILLDKDINPKISDFGMARICGGNELQANTSRIVGTYGYMSPEYAIQGIFSIKSDV 254
+K+ N++LDKD + KI+DFG+ + G A GT Y++PE + D
Sbjct: 136 IKLENLMLDKDGHIKITDFGLCK--EGISDGATMKXFCGTPEYLAPEVLEDNDYGRAVDW 193
Query: 255 FSFGVLLLEIVSGKKTTGFYRTDSLTLL 282
+ GV++ E++ G+ FY D L
Sbjct: 194 WGLGVVMYEMMCGR--LPFYNQDHERLF 219
>pdb|3BHH|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|C Chain C, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|D Chain D, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
Length = 295
Score = 43.1 bits (100), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 50/204 (24%), Positives = 88/204 (43%), Gaps = 24/204 (11%)
Query: 86 TATNKFSDANKLGEGGFGPVYKGV-LKKGDEIAVKRLPGR--SGQGLREMKNEASVIAKV 142
+ T+++ +G+G F V + V L G E A K + + S + ++++ EA + +
Sbjct: 1 SMTDEYQLYEDIGKGAFSVVRRCVKLCTGHEYAAKIINTKKLSARDHQKLEREARICRLL 60
Query: 143 QHKNLVRLLGCCIDKD---------------EKILIYEYMPNKSLDFFLFDPTKRMLLDW 187
+H N+VRL ++ E I+ EY + + +L
Sbjct: 61 KHSNIVRLHDSISEEGFHYLVFDLVTGGELFEDIVAREYYSEADASHCIQQILEAVLHCH 120
Query: 188 SANYSSR-LKVSNILLD---KDINPKISDFGMARICGGNELQANTSRIVGTYGYMSPEYA 243
R LK N+LL K K++DFG+A G+ Q GT GY+SPE
Sbjct: 121 QMGVVHRDLKPENLLLASKCKGAAVKLADFGLAIEVQGD--QQAWFGFAGTPGYLSPEVL 178
Query: 244 IQGIFSIKSDVFSFGVLLLEIVSG 267
+ + D+++ GV+L ++ G
Sbjct: 179 RKEAYGKPVDIWACGVILYILLVG 202
>pdb|3MH3|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3OBJ|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Mutants In
Response To Inhibitor Binding
Length = 360
Score = 43.1 bits (100), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 48/224 (21%), Positives = 100/224 (44%), Gaps = 31/224 (13%)
Query: 83 SVSTATNKFSDANKLGEGGFGPVYKGV-LKKGDEIAVKRL--PGRSGQGLREMKNEASVI 139
++ ++ + + +G G +G V K G +AVK+L P +S + E ++
Sbjct: 16 TIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLL 75
Query: 140 AKVQHKNLVRLLGC-----CIDKDEKILIYEYMPNKSLD--------------FFLFDPT 180
++H+N++ LL +++ + + ++ L+ F ++
Sbjct: 76 KHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQIL 135
Query: 181 KRMLLDWSANYSSR-LKVSNILLDKDINPKISDFGMARICGGNELQANTSRIVGTYGYMS 239
+ + SA+ R LK SN+ +++D KI D G+AR + V T Y +
Sbjct: 136 RGLKYIHSADIIHRDLKPSNLAVNEDCELKILDRGLAR-----HTDDEMTGYVATRWYRA 190
Query: 240 PEYAIQGI-FSIKSDVFSFGVLLLEIVSGKKTTGFYRTDSLTLL 282
PE + + ++ D++S G ++ E+++G+ T F TD + L
Sbjct: 191 PEIMLNWMHYNQTVDIWSVGCIMAELLTGR--TLFPGTDHIDQL 232
>pdb|1O6K|A Chain A, Structure Of Activated Form Of Pkb Kinase Domain S474d
With Gsk3 Peptide And Amp-Pnp
Length = 336
Score = 43.1 bits (100), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 27/88 (30%), Positives = 44/88 (50%), Gaps = 4/88 (4%)
Query: 195 LKVSNILLDKDINPKISDFGMARICGGNELQANTSRIVGTYGYMSPEYAIQGIFSIKSDV 254
+K+ N++LDKD + KI+DFG+ + G A GT Y++PE + D
Sbjct: 131 IKLENLMLDKDGHIKITDFGLCK--EGISDGATMKXFCGTPEYLAPEVLEDNDYGRAVDW 188
Query: 255 FSFGVLLLEIVSGKKTTGFYRTDSLTLL 282
+ GV++ E++ G+ FY D L
Sbjct: 189 WGLGVVMYEMMCGR--LPFYNQDHERLF 214
>pdb|3E87|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E87|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E88|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E88|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E8D|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E8D|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3D0E|A Chain A, Crystal Structure Of Human Akt2 In Complex With Gsk690693
pdb|3D0E|B Chain B, Crystal Structure Of Human Akt2 In Complex With Gsk690693
Length = 335
Score = 43.1 bits (100), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 27/88 (30%), Positives = 44/88 (50%), Gaps = 4/88 (4%)
Query: 195 LKVSNILLDKDINPKISDFGMARICGGNELQANTSRIVGTYGYMSPEYAIQGIFSIKSDV 254
+K+ N++LDKD + KI+DFG+ + G A GT Y++PE + D
Sbjct: 131 IKLENLMLDKDGHIKITDFGLCK--EGISDGATMKXFCGTPEYLAPEVLEDNDYGRAVDW 188
Query: 255 FSFGVLLLEIVSGKKTTGFYRTDSLTLL 282
+ GV++ E++ G+ FY D L
Sbjct: 189 WGLGVVMYEMMCGR--LPFYNQDHERLF 214
>pdb|3MI9|A Chain A, Crystal Structure Of Hiv-1 Tat Complexed With Human P-Tefb
pdb|3MIA|A Chain A, Crystal Structure Of Hiv-1 Tat Complexed With Atp-Bound
Human P-Tefb
Length = 351
Score = 43.1 bits (100), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 51/213 (23%), Positives = 101/213 (47%), Gaps = 42/213 (19%)
Query: 88 TNKFSDANKLGEGGFGPVYKGVLKK-GDEIAVKRL------PGRSGQGLREMKNEASVIA 140
+K+ K+G+G FG V+K +K G ++A+K++ G LRE+K ++
Sbjct: 16 VSKYEKLAKIGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIK----ILQ 71
Query: 141 KVQHKNLVRLLGCCIDKDEK--------ILIYEY--------MPNKSLDFFLFDPTK--R 182
++H+N+V L+ C K L++++ + N + F L + + +
Sbjct: 72 LLKHENVVNLIEICRTKASPYNRCKGSIYLVFDFCEHDLAGLLSNVLVKFTLSEIKRVMQ 131
Query: 183 MLLDWSANYSSR-------LKVSNILLDKDINPKISDFGMAR---ICGGNELQANTSRIV 232
MLL+ Y R +K +N+L+ +D K++DFG+AR + ++ +R+V
Sbjct: 132 MLLN-GLYYIHRNKILHRDMKAANVLITRDGVLKLADFGLARAFSLAKNSQPNRYXNRVV 190
Query: 233 GTYGYMSPEYAI-QGIFSIKSDVFSFGVLLLEI 264
T Y PE + + + D++ G ++ E+
Sbjct: 191 -TLWYRPPELLLGERDYGPPIDLWGAGCIMAEM 222
>pdb|3MH1|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3OBG|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Mutants In
Response To Inhibitor Binding
pdb|3OC1|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 43.1 bits (100), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 48/224 (21%), Positives = 100/224 (44%), Gaps = 31/224 (13%)
Query: 83 SVSTATNKFSDANKLGEGGFGPVYKGV-LKKGDEIAVKRL--PGRSGQGLREMKNEASVI 139
++ ++ + + +G G +G V K G +AVK+L P +S + E ++
Sbjct: 16 TIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLL 75
Query: 140 AKVQHKNLVRLLGC-----CIDKDEKILIYEYMPNKSLD--------------FFLFDPT 180
++H+N++ LL +++ + + ++ L+ F ++
Sbjct: 76 KHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQIL 135
Query: 181 KRMLLDWSANYSSR-LKVSNILLDKDINPKISDFGMARICGGNELQANTSRIVGTYGYMS 239
+ + SA+ R LK SN+ +++D KI D G+AR + V T Y +
Sbjct: 136 RGLKYIHSADIIHRDLKPSNLAVNEDCELKILDGGLAR-----HTDDEMTGYVATRWYRA 190
Query: 240 PEYAIQGI-FSIKSDVFSFGVLLLEIVSGKKTTGFYRTDSLTLL 282
PE + + ++ D++S G ++ E+++G+ T F TD + L
Sbjct: 191 PEIMLNWMHYNQTVDIWSVGCIMAELLTGR--TLFPGTDHIDQL 232
>pdb|4BCF|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 331
Score = 43.1 bits (100), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 51/213 (23%), Positives = 101/213 (47%), Gaps = 42/213 (19%)
Query: 88 TNKFSDANKLGEGGFGPVYKGVLKK-GDEIAVKRL------PGRSGQGLREMKNEASVIA 140
+K+ K+G+G FG V+K +K G ++A+K++ G LRE+K ++
Sbjct: 17 VSKYEKLAKIGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIK----ILQ 72
Query: 141 KVQHKNLVRLLGCCIDKDEK--------ILIYEY--------MPNKSLDFFLFDPTK--R 182
++H+N+V L+ C K L++++ + N + F L + + +
Sbjct: 73 LLKHENVVNLIEICRTKASPYNRCKASIYLVFDFCEHDLAGLLSNVLVKFTLSEIKRVMQ 132
Query: 183 MLLDWSANYSSR-------LKVSNILLDKDINPKISDFGMAR---ICGGNELQANTSRIV 232
MLL+ Y R +K +N+L+ +D K++DFG+AR + ++ +R+V
Sbjct: 133 MLLN-GLYYIHRNKILHRDMKAANVLITRDGVLKLADFGLARAFSLAKNSQPNRYXNRVV 191
Query: 233 GTYGYMSPEYAI-QGIFSIKSDVFSFGVLLLEI 264
T Y PE + + + D++ G ++ E+
Sbjct: 192 -TLWYRPPELLLGERDYGPPIDLWGAGCIMAEM 223
>pdb|3FE3|A Chain A, Crystal Structure Of The Kinase Mark3PAR-1: T211a-S215a
Double Mutant
pdb|3FE3|B Chain B, Crystal Structure Of The Kinase Mark3PAR-1: T211a-S215a
Double Mutant
Length = 328
Score = 42.7 bits (99), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 52/199 (26%), Positives = 86/199 (43%), Gaps = 39/199 (19%)
Query: 97 LGEGGFGPV--YKGVLKKGDEIAVKRLPGR--SGQGLREMKNEASVIAKVQHKNLVRLLG 152
+G+G F V + +L G E+A+K + + L+++ E ++ + H N+V+L
Sbjct: 23 IGKGNFAKVKLARHILT-GREVAIKIIDKTQLNPTSLQKLFREVRIMKILNHPNIVKLFE 81
Query: 153 CCIDKDEKILIYEYMPNKSLDFFLFDPTK----------RMLLDWSANYSSR-------L 195
+ LI EY + +L + R ++ + Y + L
Sbjct: 82 VIETEKTLYLIMEYASGGEVFDYLVAHGRMKEKEARSKFRQIVS-AVQYCHQKRIVHRDL 140
Query: 196 KVSNILLDKDINPKISDFGMA-RICGGNELQANTSRIVGTYGYMSPEYAIQGIFSIKS-- 252
K N+LLD D+N KI+DFG + G +L A +P YA +F K
Sbjct: 141 KAENLLLDADMNIKIADFGFSNEFTVGGKLDAFCG---------APPYAAPELFQGKKYD 191
Query: 253 ----DVFSFGVLLLEIVSG 267
DV+S GV+L +VSG
Sbjct: 192 GPEVDVWSLGVILYTLVSG 210
>pdb|3SOA|A Chain A, Full-Length Human Camkii
Length = 444
Score = 42.7 bits (99), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 53/205 (25%), Positives = 84/205 (40%), Gaps = 30/205 (14%)
Query: 88 TNKFSDANKLGEGGFGPVYKGV-LKKGDEIAV-----KRLPGRSGQGLREMKNEASVIAK 141
T ++ +LG+G F V + V + G E A K+L R Q L + EA +
Sbjct: 10 TEEYQLFEELGKGAFSVVRRCVKVLAGQEYAAMIINTKKLSARDHQKL---EREARICRL 66
Query: 142 VQHKNLVRLLGCCIDKDEKILIY---------------EYMPNKSLDFFLFDPTKRMLLD 186
++H N+VRL ++ LI+ EY + + +L
Sbjct: 67 LKHPNIVRLHDSISEEGHHYLIFDLVTGGELFEDIVAREYYSEADASHCIQQILEAVLHC 126
Query: 187 WSANYSSR-LKVSNILLD---KDINPKISDFGMARICGGNELQANTSRIVGTYGYMSPEY 242
R LK N+LL K K++DFG+A G Q GT GY+SPE
Sbjct: 127 HQMGVVHRNLKPENLLLASKLKGAAVKLADFGLAIEVEGE--QQAWFGFAGTPGYLSPEV 184
Query: 243 AIQGIFSIKSDVFSFGVLLLEIVSG 267
+ + D+++ GV+L ++ G
Sbjct: 185 LRKDPYGKPVDLWACGVILYILLVG 209
>pdb|1GZK|A Chain A, Molecular Mechanism For The Regulation Of Protein Kinase B
Akt By Hydrophobic Motif Phosphorylation
pdb|1GZO|A Chain A, Structure Of Protein Kinase B Unphosphorylated
Length = 315
Score = 42.7 bits (99), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 27/88 (30%), Positives = 44/88 (50%), Gaps = 4/88 (4%)
Query: 195 LKVSNILLDKDINPKISDFGMARICGGNELQANTSRIVGTYGYMSPEYAIQGIFSIKSDV 254
+K+ N++LDKD + KI+DFG+ + G A GT Y++PE + D
Sbjct: 131 IKLENLMLDKDGHIKITDFGLCK--EGISDGATMKTFCGTPEYLAPEVLEDNDYGRAVDW 188
Query: 255 FSFGVLLLEIVSGKKTTGFYRTDSLTLL 282
+ GV++ E++ G+ FY D L
Sbjct: 189 WGLGVVMYEMMCGR--LPFYNQDHERLF 214
>pdb|1MRV|A Chain A, Crystal Structure Of An Inactive Akt2 Kinase Domain
pdb|1MRY|A Chain A, Crystal Structure Of An Inactive Akt2 Kinase Domain
Length = 339
Score = 42.7 bits (99), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 27/88 (30%), Positives = 44/88 (50%), Gaps = 4/88 (4%)
Query: 195 LKVSNILLDKDINPKISDFGMARICGGNELQANTSRIVGTYGYMSPEYAIQGIFSIKSDV 254
+K+ N++LDKD + KI+DFG+ + G A GT Y++PE + D
Sbjct: 134 IKLENLMLDKDGHIKITDFGLCK--EGISDGATMKTFCGTPEYLAPEVLEDNDYGRAVDW 191
Query: 255 FSFGVLLLEIVSGKKTTGFYRTDSLTLL 282
+ GV++ E++ G+ FY D L
Sbjct: 192 WGLGVVMYEMMCGR--LPFYNQDHERLF 217
>pdb|3QAM|E Chain E, Crystal Structure Of Glu208ala Mutant Of Catalytic Subunit
Of Camp- Dependent Protein Kinase
Length = 350
Score = 42.7 bits (99), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 56/221 (25%), Positives = 99/221 (44%), Gaps = 27/221 (12%)
Query: 68 SKKKEVDQLPLFSFSSVSTAT-NKFSDANKLGEGGFGPVYKGVLKK-GDEIAVKRLPGRS 125
+K KE D L + S +TA ++F LG G FG V K+ G+ A+K L +
Sbjct: 20 AKAKE-DFLKKWETPSQNTAQLDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQK 78
Query: 126 GQGLREMK---NEASVIAKVQHKNLVRLLGCCIDKDEKILIYEYMPNKSLDFFL------ 176
L++++ NE ++ V LV+L D ++ EY+ + L
Sbjct: 79 VVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRF 138
Query: 177 FDPTKR-----MLLDWSANYS-----SRLKVSNILLDKDINPKISDFGMARICGGNELQA 226
+P R ++L + +S LK N+L+D+ +++DFG A+ G
Sbjct: 139 SEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKG----- 193
Query: 227 NTSRIVGTYGYMSPEYAIQGIFSIKSDVFSFGVLLLEIVSG 267
T + GT Y++P + ++ D ++ GVL+ E+ +G
Sbjct: 194 RTWXLCGTPEYLAPAIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|1GZN|A Chain A, Structure Of Pkb Kinase Domain
Length = 335
Score = 42.7 bits (99), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 27/88 (30%), Positives = 44/88 (50%), Gaps = 4/88 (4%)
Query: 195 LKVSNILLDKDINPKISDFGMARICGGNELQANTSRIVGTYGYMSPEYAIQGIFSIKSDV 254
+K+ N++LDKD + KI+DFG+ + G A GT Y++PE + D
Sbjct: 131 IKLENLMLDKDGHIKITDFGLCK--EGISDGATMKTFCGTPEYLAPEVLEDNDYGRAVDW 188
Query: 255 FSFGVLLLEIVSGKKTTGFYRTDSLTLL 282
+ GV++ E++ G+ FY D L
Sbjct: 189 WGLGVVMYEMMCGR--LPFYNQDHERLF 214
>pdb|3BLH|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1
pdb|3BLQ|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1 IN COMPLEX WITH
ATP
pdb|3BLR|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1 IN COMPLEX WITH
Flavopiridol
pdb|3MY1|A Chain A, Structure Of Cdk9CYCLINT1 IN COMPLEX WITH DRB
pdb|3LQ5|A Chain A, Structure Of Cdk9CYCLINT IN COMPLEX WITH S-Cr8
pdb|3TN8|A Chain A, Cdk9CYCLIN T IN COMPLEX WITH CAN508
pdb|3TNH|A Chain A, Cdk9CYCLIN T IN COMPLEX WITH CAN508
pdb|3TNI|A Chain A, Structure Of Cdk9CYCLIN T F241L
pdb|4BCH|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCI|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCJ|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 331
Score = 42.7 bits (99), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 51/213 (23%), Positives = 101/213 (47%), Gaps = 42/213 (19%)
Query: 88 TNKFSDANKLGEGGFGPVYKGVLKK-GDEIAVKRL------PGRSGQGLREMKNEASVIA 140
+K+ K+G+G FG V+K +K G ++A+K++ G LRE+K ++
Sbjct: 17 VSKYEKLAKIGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIK----ILQ 72
Query: 141 KVQHKNLVRLLGCCIDKDEK--------ILIYEY--------MPNKSLDFFLFDPTK--R 182
++H+N+V L+ C K L++++ + N + F L + + +
Sbjct: 73 LLKHENVVNLIEICRTKASPYNRCKGSIYLVFDFCEHDLAGLLSNVLVKFTLSEIKRVMQ 132
Query: 183 MLLDWSANYSSR-------LKVSNILLDKDINPKISDFGMAR---ICGGNELQANTSRIV 232
MLL+ Y R +K +N+L+ +D K++DFG+AR + ++ +R+V
Sbjct: 133 MLLN-GLYYIHRNKILHRDMKAANVLITRDGVLKLADFGLARAFSLAKNSQPNRYXNRVV 191
Query: 233 GTYGYMSPEYAI-QGIFSIKSDVFSFGVLLLEI 264
T Y PE + + + D++ G ++ E+
Sbjct: 192 -TLWYRPPELLLGERDYGPPIDLWGAGCIMAEM 223
>pdb|2J0L|A Chain A, Crystal Structure Of A The Active Conformation Of The
Kinase Domain Of Focal Adhesion Kinase With A
Phosphorylated Activation Loop
Length = 276
Score = 42.4 bits (98), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 47/192 (24%), Positives = 86/192 (44%), Gaps = 26/192 (13%)
Query: 97 LGEGGFGPVYKGVLKKGDE----IAVKRLPGRSGQGLRE-MKNEASVIAKVQHKNLVRLL 151
+GEG FG V++G+ + +A+K + +RE EA + + H ++V+L+
Sbjct: 18 IGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLI 77
Query: 152 GCCIDKDEKILIYEYMPNKSLDFFL----FDPTKRMLLDWSANYSSRLK----------- 196
G I ++ +I E L FL F L+ ++ S+ L
Sbjct: 78 GV-ITENPVWIIMELCTLGELRSFLQVRKFSLDLASLILYAYQLSTALAYLESKRFVHRD 136
Query: 197 --VSNILLDKDINPKISDFGMAR-ICGGNELQANTSRIVGTYGYMSPEYAIQGIFSIKSD 253
N+L+ + K+ DFG++R + +A+ ++ +M+PE F+ SD
Sbjct: 137 IAARNVLVSSNDCVKLGDFGLSRYMEDSTXXKASKGKL--PIKWMAPESINFRRFTSASD 194
Query: 254 VFSFGVLLLEIV 265
V+ FGV + EI+
Sbjct: 195 VWMFGVCMWEIL 206
>pdb|2F2U|A Chain A, Crystal Structure Of The Rho-Kinase Kinase Domain
pdb|2F2U|B Chain B, Crystal Structure Of The Rho-Kinase Kinase Domain
pdb|2H9V|A Chain A, Structural Basis For Induced-Fit Binding Of Rho-Kinase To
The Inhibitor Y27632
Length = 402
Score = 42.4 bits (98), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 74/288 (25%), Positives = 116/288 (40%), Gaps = 60/288 (20%)
Query: 31 RKPRS--------RGEDLMTLDLDLNLKANNVNIELPVNSKQTKRSKKKEVDQLPLFSFS 82
R PRS G + + LDLD N NI+ +N + K KK Q+ +
Sbjct: 20 RDPRSPINVESLLDGLNSLVLDLDFPALRKNKNIDNFLN-RYEKIVKKIRGLQMKAEDYD 78
Query: 83 SVSTATNKFSDANKLGEGGFGPVYKGVLKKGDEIAVKRLPGRSGQGLRE----MKNEASV 138
V +G G FG V K ++ +L + R E +
Sbjct: 79 VVKV----------IGRGAFGEVQLVRHKASQKVYAMKLLSKFEMIKRSDSAFFWEERDI 128
Query: 139 IAKVQHKNLVRLLGCCIDKDEKIL--IYEYMPNKSLDFFL--FDPTKRMLLDWSANYSSR 194
+A +V+L C +D+K L + EYMP L + +D ++ W+ Y++
Sbjct: 129 MAFANSPWVVQLF--CAFQDDKYLYMVMEYMPGGDLVNLMSNYDVPEK----WAKFYTAE 182
Query: 195 L-----------------KVSNILLDKDINPKISDFGMA-RICGGNELQANTSRIVGTYG 236
+ K N+LLDK + K++DFG ++ + +T+ VGT
Sbjct: 183 VVLALDAIHSMGLIHRDVKPDNMLLDKHGHLKLADFGTCMKMDETGMVHCDTA--VGTPD 240
Query: 237 YMSPEY----AIQGIFSIKSDVFSFGVLLLEIVSGKKTTGFYRTDSLT 280
Y+SPE G + + D +S GV L E++ G T FY DSL
Sbjct: 241 YISPEVLKSQGGDGYYGRECDWWSVGVFLFEMLVG--DTPFY-ADSLV 285
>pdb|3UIU|A Chain A, Crystal Structure Of Apo-Pkr Kinase Domain
pdb|3UIU|B Chain B, Crystal Structure Of Apo-Pkr Kinase Domain
Length = 306
Score = 42.4 bits (98), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 71/300 (23%), Positives = 113/300 (37%), Gaps = 78/300 (26%)
Query: 91 FSDANKLGEGGFGPVYKGVLK-KGDEIAVKRLPGRSGQGLREMKNEASVIAKVQHKNLVR 149
F + +G GGFG V+K + G ++R+ + + RE+K +AK+ H N+V
Sbjct: 14 FKEIELIGSGGFGQVFKAKHRIDGKTYVIRRVKYNNEKAEREVK----ALAKLDHVNIVH 69
Query: 150 LLGCCID--------KDEKILIYEYMP--------------------------------- 168
G C D D+ + +Y P
Sbjct: 70 YNG-CWDGFDYDPETSDDSLESSDYDPENSKNSSRSKTKCLFIQMEFCDKGTLEQWIEKR 128
Query: 169 -----NKSLDFFLFDP-TKRMLLDWSANYSSR-LKVSNILLDKDINPKISDFGMARICGG 221
+K L LF+ TK + S R LK SNI L KI DFG+
Sbjct: 129 RGEKLDKVLALELFEQITKGVDYIHSKKLIHRDLKPSNIFLVDTKQVKIGDFGLVTSLKN 188
Query: 222 NELQANTSRIVGTYGYMSPEYAIQGIFSIKSDVFSFGVLLLEIVSGKKTTGFYRTDSLTL 281
+ +R GT YMSPE + + D+++ G++L E+ L +
Sbjct: 189 D---GKRTRSKGTLRYMSPEQISSQDYGKEVDLYALGLILAEL--------------LHV 231
Query: 282 LGYAWDLWTSNRTLELIDPILEDEYSSKHMLLRYVNIALLCVQESADDRPTMNEVVSMLT 341
A++ TS +L D I+ D + K L + + +DRP +E++ LT
Sbjct: 232 CDTAFE--TSKFFTDLRDGIISDIFDKKEKTL-----LQKLLSKKPEDRPNTSEILRTLT 284
>pdb|3PLS|A Chain A, Ron In Complex With Ligand Amp-Pnp
Length = 298
Score = 42.4 bits (98), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 49/198 (24%), Positives = 89/198 (44%), Gaps = 31/198 (15%)
Query: 97 LGEGGFGPVYKGVL----KKGDEIAVKRLPGRSG-QGLREMKNEASVIAKVQHKNLVRLL 151
+G+G FG VY G + + A+K L + Q + E ++ + H N++ L+
Sbjct: 29 IGKGHFGVVYHGEYIDQAQNRIQCAIKSLSRITEMQQVEAFLREGLLMRGLNHPNVLALI 88
Query: 152 GCCIDKDE-KILIYEYMPNKSLDFFLF----DPTKRMLLDWSANYSS------------- 193
G + + ++ YM + L F+ +PT + L+ + +
Sbjct: 89 GIMLPPEGLPHVLLPYMCHGDLLQFIRSPQRNPTVKDLISFGLQVARGMEYLAEQKFVHR 148
Query: 194 RLKVSNILLDKDINPKISDFGMARICGGNEL----QANTSRIVGTYGYMSPEYAIQGI-F 248
L N +LD+ K++DFG+AR E Q +R+ + + ++Q F
Sbjct: 149 DLAARNCMLDESFTVKVADFGLARDILDREYYSVQQHRHARLPVKWTALE---SLQTYRF 205
Query: 249 SIKSDVFSFGVLLLEIVS 266
+ KSDV+SFGVLL E+++
Sbjct: 206 TTKSDVWSFGVLLWELLT 223
>pdb|2QNJ|A Chain A, Kinase And Ubiquitin-Associated Domains Of Mark3PAR-1
pdb|2QNJ|B Chain B, Kinase And Ubiquitin-Associated Domains Of Mark3PAR-1
Length = 328
Score = 42.0 bits (97), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 52/199 (26%), Positives = 85/199 (42%), Gaps = 39/199 (19%)
Query: 97 LGEGGFGPV--YKGVLKKGDEIAVKRLPGR--SGQGLREMKNEASVIAKVQHKNLVRLLG 152
+G+G F V + +L G E+A+K + + L+++ E ++ + H N+V+L
Sbjct: 20 IGKGNFAKVKLARHILT-GREVAIKIIDKTQLNPTSLQKLFREVRIMKILNHPNIVKLFE 78
Query: 153 CCIDKDEKILIYEYMPNKSLDFFLFDPTK----------RMLLDWSANYSSR-------L 195
+ LI EY + +L + R ++ + Y + L
Sbjct: 79 VIETEKTLYLIMEYASGGEVFDYLVAHGRMKEKEARSKFRQIVS-AVQYCHQKRIVHRDL 137
Query: 196 KVSNILLDKDINPKISDFGMA-RICGGNELQANTSRIVGTYGYMSPEYAIQGIFSIKS-- 252
K N+LLD D+N KI+DFG + G +L SP YA +F K
Sbjct: 138 KAENLLLDADMNIKIADFGFSNEFTVGGKLDTFCG---------SPPYAAPELFQGKKYD 188
Query: 253 ----DVFSFGVLLLEIVSG 267
DV+S GV+L +VSG
Sbjct: 189 GPEVDVWSLGVILYTLVSG 207
>pdb|4EBW|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With Novel Allosteric Inhibitor
pdb|4EBV|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With Novel Allosteric Inhibitor
Length = 304
Score = 42.0 bits (97), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 47/192 (24%), Positives = 86/192 (44%), Gaps = 26/192 (13%)
Query: 97 LGEGGFGPVYKGVLKKGDE----IAVKRLPGRSGQGLRE-MKNEASVIAKVQHKNLVRLL 151
+GEG FG V++G+ + +A+K + +RE EA + + H ++V+L+
Sbjct: 46 IGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLI 105
Query: 152 GCCIDKDEKILIYEYMPNKSLDFFL------FDPTKRMLLDW----------SANYSSR- 194
G I ++ +I E L FL D +L + S + R
Sbjct: 106 GV-ITENPVWIIMELCTLGELRSFLQVRKYSLDLASLILYAYQLSTALAYLESKRFVHRD 164
Query: 195 LKVSNILLDKDINPKISDFGMAR-ICGGNELQANTSRIVGTYGYMSPEYAIQGIFSIKSD 253
+ N+L+ + K+ DFG++R + +A+ ++ +M+PE F+ SD
Sbjct: 165 IAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKL--PIKWMAPESINFRRFTSASD 222
Query: 254 VFSFGVLLLEIV 265
V+ FGV + EI+
Sbjct: 223 VWMFGVCMWEIL 234
>pdb|3QD2|B Chain B, Crsytal Structure Of Mouse Perk Kinase Domain
Length = 332
Score = 42.0 bits (97), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 28/81 (34%), Positives = 38/81 (46%), Gaps = 10/81 (12%)
Query: 195 LKVSNILLDKDINPKISDFGMARICGGNELQ----------ANTSRIVGTYGYMSPEYAI 244
LK SNI D K+ DFG+ +E + A VGT YMSPE
Sbjct: 190 LKPSNIFFTMDDVVKVGDFGLVTAMDQDEEEQTVLTPMPAYATHXGQVGTKLYMSPEQIH 249
Query: 245 QGIFSIKSDVFSFGVLLLEIV 265
+S K D+FS G++L E++
Sbjct: 250 GNNYSHKVDIFSLGLILFELL 270
Score = 33.9 bits (76), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 22/69 (31%), Positives = 34/69 (49%), Gaps = 4/69 (5%)
Query: 91 FSDANKLGEGGFGPVYKGVLKKGD-EIAVK--RLPGRSGQGLREMKNEASVIAKVQHKNL 147
F +G GGFG V++ K D A+K RLP R + M+ E +AK++H +
Sbjct: 8 FEPIQCMGRGGFGVVFEAKNKVDDCNYAIKRIRLPNRELAREKVMR-EVKALAKLEHPGI 66
Query: 148 VRLLGCCID 156
VR ++
Sbjct: 67 VRYFNAWLE 75
>pdb|2V7O|A Chain A, Crystal Structure Of Human Calcium-Calmodulin-Dependent
Protein Kinase Ii Gamma
Length = 336
Score = 42.0 bits (97), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 54/216 (25%), Positives = 93/216 (43%), Gaps = 35/216 (16%)
Query: 81 FSSVSTATNKFSDA----NKLGEGGFGPVYKGVLKKGDE------IAVKRLPGRSGQGLR 130
F ++T T +F+D +LG+G F V + V K + I K+L R Q L
Sbjct: 20 FQXMATCT-RFTDDYQLFEELGKGAFSVVRRCVKKTPTQEYAAKIINTKKLSARDHQKL- 77
Query: 131 EMKNEASVIAKVQHKNLVRLLGCCIDKDEKILIYEYMPNKSL-------DFFLFDPTKRM 183
+ EA + ++H N+VRL ++ L+++ + L +++
Sbjct: 78 --EREARICRLLKHPNIVRLHDSISEEGFHYLVFDLVTGGELFEDIVAREYYSEADASHC 135
Query: 184 LLDW--SANYSSR-------LKVSNILLD---KDINPKISDFGMARICGGNELQANTSRI 231
+ S N+ + LK N+LL K K++DFG+A G Q
Sbjct: 136 IHQILESVNHIHQHDIVHRDLKPENLLLASKCKGAAVKLADFGLAIEVQGE--QQAWFGF 193
Query: 232 VGTYGYMSPEYAIQGIFSIKSDVFSFGVLLLEIVSG 267
GT GY+SPE + + D+++ GV+L ++ G
Sbjct: 194 AGTPGYLSPEVLRKDPYGKPVDIWACGVILYILLVG 229
>pdb|2J0M|B Chain B, Crystal Structure A Two-Chain Complex Between The Ferm And
Kinase Domains Of Focal Adhesion Kinase.
pdb|2JKQ|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 42.0 bits (97), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 47/192 (24%), Positives = 86/192 (44%), Gaps = 26/192 (13%)
Query: 97 LGEGGFGPVYKGVLKKGDE----IAVKRLPGRSGQGLRE-MKNEASVIAKVQHKNLVRLL 151
+GEG FG V++G+ + +A+K + +RE EA + + H ++V+L+
Sbjct: 18 IGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLI 77
Query: 152 GCCIDKDEKILIYEYMPNKSLDFFL------FDPTKRMLLDW----------SANYSSR- 194
G I ++ +I E L FL D +L + S + R
Sbjct: 78 GV-ITENPVWIIMELCTLGELRSFLQVRKYSLDLASLILYAYQLSTALAYLESKRFVHRD 136
Query: 195 LKVSNILLDKDINPKISDFGMAR-ICGGNELQANTSRIVGTYGYMSPEYAIQGIFSIKSD 253
+ N+L+ + K+ DFG++R + +A+ ++ +M+PE F+ SD
Sbjct: 137 IAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKL--PIKWMAPESINFRRFTSASD 194
Query: 254 VFSFGVLLLEIV 265
V+ FGV + EI+
Sbjct: 195 VWMFGVCMWEIL 206
>pdb|1MP8|A Chain A, Crystal Structure Of Focal Adhesion Kinase (Fak)
pdb|4I4F|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With An Allosteric Binding Pyrazolobenzothiazine
Compound
Length = 281
Score = 42.0 bits (97), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 47/192 (24%), Positives = 86/192 (44%), Gaps = 26/192 (13%)
Query: 97 LGEGGFGPVYKGVLKKGDE----IAVKRLPGRSGQGLRE-MKNEASVIAKVQHKNLVRLL 151
+GEG FG V++G+ + +A+K + +RE EA + + H ++V+L+
Sbjct: 23 IGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLI 82
Query: 152 GCCIDKDEKILIYEYMPNKSLDFFL------FDPTKRMLLDW----------SANYSSR- 194
G I ++ +I E L FL D +L + S + R
Sbjct: 83 GV-ITENPVWIIMELCTLGELRSFLQVRKYSLDLASLILYAYQLSTALAYLESKRFVHRD 141
Query: 195 LKVSNILLDKDINPKISDFGMAR-ICGGNELQANTSRIVGTYGYMSPEYAIQGIFSIKSD 253
+ N+L+ + K+ DFG++R + +A+ ++ +M+PE F+ SD
Sbjct: 142 IAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKL--PIKWMAPESINFRRFTSASD 199
Query: 254 VFSFGVLLLEIV 265
V+ FGV + EI+
Sbjct: 200 VWMFGVCMWEIL 211
>pdb|3BZ3|A Chain A, Crystal Structure Analysis Of Focal Adhesion Kinase With A
Methanesulfonamide Diaminopyrimidine Inhibitor
Length = 276
Score = 42.0 bits (97), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 47/192 (24%), Positives = 86/192 (44%), Gaps = 26/192 (13%)
Query: 97 LGEGGFGPVYKGVLKKGDE----IAVKRLPGRSGQGLRE-MKNEASVIAKVQHKNLVRLL 151
+GEG FG V++G+ + +A+K + +RE EA + + H ++V+L+
Sbjct: 15 IGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLI 74
Query: 152 GCCIDKDEKILIYEYMPNKSLDFFL------FDPTKRMLLDW----------SANYSSR- 194
G I ++ +I E L FL D +L + S + R
Sbjct: 75 GV-ITENPVWIIMELCTLGELRSFLQVRKYSLDLASLILYAYQLSTALAYLESKRFVHRD 133
Query: 195 LKVSNILLDKDINPKISDFGMAR-ICGGNELQANTSRIVGTYGYMSPEYAIQGIFSIKSD 253
+ N+L+ + K+ DFG++R + +A+ ++ +M+PE F+ SD
Sbjct: 134 IAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKL--PIKWMAPESINFRRFTSASD 191
Query: 254 VFSFGVLLLEIV 265
V+ FGV + EI+
Sbjct: 192 VWMFGVCMWEIL 203
>pdb|2JKM|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 42.0 bits (97), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 47/192 (24%), Positives = 86/192 (44%), Gaps = 26/192 (13%)
Query: 97 LGEGGFGPVYKGVLKKGDE----IAVKRLPGRSGQGLRE-MKNEASVIAKVQHKNLVRLL 151
+GEG FG V++G+ + +A+K + +RE EA + + H ++V+L+
Sbjct: 18 IGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLI 77
Query: 152 GCCIDKDEKILIYEYMPNKSLDFFL------FDPTKRMLLDW----------SANYSSR- 194
G I ++ +I E L FL D +L + S + R
Sbjct: 78 GV-ITENPVWIIMELCTLGELRSFLQVRKYSLDLASLILYAYQLSTALAYLESKRFVHRD 136
Query: 195 LKVSNILLDKDINPKISDFGMAR-ICGGNELQANTSRIVGTYGYMSPEYAIQGIFSIKSD 253
+ N+L+ + K+ DFG++R + +A+ ++ +M+PE F+ SD
Sbjct: 137 IAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKL--PIKWMAPESINFRRFTSASD 194
Query: 254 VFSFGVLLLEIV 265
V+ FGV + EI+
Sbjct: 195 VWMFGVCMWEIL 206
>pdb|2R5T|A Chain A, Crystal Structure Of Inactive Serum And Glucocorticoid-
Regulated Kinase 1 In Complex With Amp-Pnp
pdb|3HDM|A Chain A, Crystal Structure Of Serum And Glucocorticoid-Regulated
Kinase 1 In Complex With Compound 1
pdb|3HDN|A Chain A, Crystal Structure Of Serum And Glucocorticoid-Regulated
Kinase 1 In Complex With Compound 2
Length = 373
Score = 42.0 bits (97), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 54/197 (27%), Positives = 87/197 (44%), Gaps = 33/197 (16%)
Query: 97 LGEGGFGPVYKGVLKKGDEI--AVKRLPGRSGQGLREMKN---EASVIAK-VQHKNLVRL 150
+G+G FG V K +E+ AVK L ++ +E K+ E +V+ K V+H LV L
Sbjct: 46 IGKGSFGKVLLA-RHKAEEVFYAVKVLQKKAILKKKEEKHIMSERNVLLKNVKHPFLVGL 104
Query: 151 LGCCIDKDEKILIYEYMPNKSLDFFL------FDPTKRMLLDWSANYSSRL--------- 195
D+ + +Y+ L + L +P R ++A +S L
Sbjct: 105 HFSFQTADKLYFVLDYINGGELFYHLQRERCFLEPRARF---YAAEIASALGYLHSLNIV 161
Query: 196 ----KVSNILLDKDINPKISDFGMARICGGN-ELQANTSRIVGTYGYMSPEYAIQGIFSI 250
K NILLD + ++DFG+ C N E + TS GT Y++PE + +
Sbjct: 162 YRDLKPENILLDSQGHIVLTDFGL---CKENIEHNSTTSTFCGTPEYLAPEVLHKQPYDR 218
Query: 251 KSDVFSFGVLLLEIVSG 267
D + G +L E++ G
Sbjct: 219 TVDWWCLGAVLYEMLYG 235
>pdb|2ETM|A Chain A, Crystal Structure Of Focal Adhesion Kinase Domain
Complexed With 7h-Pyrrolo [2,3-D] Pyrimidine Derivative
pdb|2ETM|B Chain B, Crystal Structure Of Focal Adhesion Kinase Domain
Complexed With 7h-Pyrrolo [2,3-D] Pyrimidine Derivative
pdb|2IJM|A Chain A, Crystal Structure Of Focal Adhesion Kinase Domain With 2
Molecules In The Asymmetric Unit Complexed With Adp And
Atp
pdb|2IJM|B Chain B, Crystal Structure Of Focal Adhesion Kinase Domain With 2
Molecules In The Asymmetric Unit Complexed With Adp And
Atp
Length = 281
Score = 42.0 bits (97), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 47/192 (24%), Positives = 86/192 (44%), Gaps = 26/192 (13%)
Query: 97 LGEGGFGPVYKGVLKKGDE----IAVKRLPGRSGQGLRE-MKNEASVIAKVQHKNLVRLL 151
+GEG FG V++G+ + +A+K + +RE EA + + H ++V+L+
Sbjct: 20 IGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLI 79
Query: 152 GCCIDKDEKILIYEYMPNKSLDFFL------FDPTKRMLLDW----------SANYSSR- 194
G I ++ +I E L FL D +L + S + R
Sbjct: 80 GV-ITENPVWIIMELCTLGELRSFLQVRKYSLDLASLILYAYQLSTALAYLESKRFVHRD 138
Query: 195 LKVSNILLDKDINPKISDFGMAR-ICGGNELQANTSRIVGTYGYMSPEYAIQGIFSIKSD 253
+ N+L+ + K+ DFG++R + +A+ ++ +M+PE F+ SD
Sbjct: 139 IAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKL--PIKWMAPESINFRRFTSASD 196
Query: 254 VFSFGVLLLEIV 265
V+ FGV + EI+
Sbjct: 197 VWMFGVCMWEIL 208
>pdb|3PXK|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Pyrrolo[2,3- D]thiazole
pdb|3PXK|B Chain B, Focal Adhesion Kinase Catalytic Domain In Complex With
Pyrrolo[2,3- D]thiazole
Length = 282
Score = 41.6 bits (96), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 47/192 (24%), Positives = 86/192 (44%), Gaps = 26/192 (13%)
Query: 97 LGEGGFGPVYKGVLKKGDE----IAVKRLPGRSGQGLRE-MKNEASVIAKVQHKNLVRLL 151
+GEG FG V++G+ + +A+K + +RE EA + + H ++V+L+
Sbjct: 21 IGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLI 80
Query: 152 GCCIDKDEKILIYEYMPNKSLDFFL------FDPTKRMLLDW----------SANYSSR- 194
G I ++ +I E L FL D +L + S + R
Sbjct: 81 GV-ITENPVWIIMELCTLGELRSFLQVRKYSLDLASLILYAYQLSTALAYLESKRFVHRD 139
Query: 195 LKVSNILLDKDINPKISDFGMAR-ICGGNELQANTSRIVGTYGYMSPEYAIQGIFSIKSD 253
+ N+L+ + K+ DFG++R + +A+ ++ +M+PE F+ SD
Sbjct: 140 IAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKL--PIKWMAPESINFRRFTSASD 197
Query: 254 VFSFGVLLLEIV 265
V+ FGV + EI+
Sbjct: 198 VWMFGVCMWEIL 209
>pdb|1RDQ|E Chain E, Hydrolysis Of Atp In The Crystal Of Y204a Mutant Of
Camp-Dependent Protein Kinase
Length = 350
Score = 41.6 bits (96), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 56/221 (25%), Positives = 99/221 (44%), Gaps = 27/221 (12%)
Query: 68 SKKKEVDQLPLFSFSSVSTAT-NKFSDANKLGEGGFGPVYKGVLKK-GDEIAVKRLPGRS 125
+K KE D L + S +TA ++F LG G FG V K+ G+ A+K L +
Sbjct: 20 AKAKE-DFLKKWETPSQNTAQLDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQK 78
Query: 126 GQGLREMK---NEASVIAKVQHKNLVRLLGCCIDKDEKILIYEYMPNKSLDFFL------ 176
L++++ NE ++ V LV+L D ++ EY+ + L
Sbjct: 79 VVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRF 138
Query: 177 FDPTKR-----MLLDWSANYS-----SRLKVSNILLDKDINPKISDFGMARICGGNELQA 226
+P R ++L + +S LK N+L+D+ +++DFG A+ G
Sbjct: 139 SEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKG----- 193
Query: 227 NTSRIVGTYGYMSPEYAIQGIFSIKSDVFSFGVLLLEIVSG 267
T + GT ++PE + ++ D ++ GVL+ E+ +G
Sbjct: 194 RTWXLCGTPEALAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|3Q4T|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dorsomorphin
pdb|3Q4T|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dorsomorphin
pdb|3SOC|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With A Quinazolin
pdb|3SOC|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With A Quinazolin
pdb|4ASX|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dihydro-Bauerine C
pdb|4ASX|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dihydro-Bauerine C
Length = 322
Score = 41.6 bits (96), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 51/207 (24%), Positives = 88/207 (42%), Gaps = 48/207 (23%)
Query: 100 GGFGPVYKGVLKKGDEIAVKRLPGRSGQGLREMKNEASVIAKVQHKNLVRLLGC-----C 154
G FG V+K L + +AVK P + Q + + E + ++H+N+++ +G
Sbjct: 35 GRFGCVWKAQLLN-EYVAVKIFPIQDKQSWQN-EYEVYSLPGMKHENILQFIGAEKRGTS 92
Query: 155 IDKDEKILIYEYMPNKSLDFFLFDPTKRMLLDWS-----ANYSSR--------------- 194
+D D LI + SL FL K ++ W+ A +R
Sbjct: 93 VDVD-LWLITAFHEKGSLSDFL----KANVVSWNELCHIAETMARGLAYLHEDIPGLKDG 147
Query: 195 ---------LKVSNILLDKDINPKISDFGMARICGGNELQANTSRIVGTYGYMSPEYAIQ 245
+K N+LL ++ I+DFG+A + +T VGT YM+PE ++
Sbjct: 148 HKPAISHRDIKSKNVLLKNNLTACIADFGLALKFEAGKSAGDTHGQVGTRRYMAPE-VLE 206
Query: 246 GIFSIKSDVF------SFGVLLLEIVS 266
G + + D F + G++L E+ S
Sbjct: 207 GAINFQRDAFLRIDMYAMGLVLWELAS 233
>pdb|2J0J|A Chain A, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains
Length = 656
Score = 41.6 bits (96), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 47/194 (24%), Positives = 89/194 (45%), Gaps = 30/194 (15%)
Query: 97 LGEGGFGPVYKGVLKKGDE----IAVKRLPGRSGQGLRE-MKNEASVIAKVQHKNLVRLL 151
+GEG FG V++G+ + +A+K + +RE EA + + H ++V+L+
Sbjct: 398 IGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLI 457
Query: 152 GCCIDKDEKILIYEYMPNKSLDFFLFDPTKRMLLDWSAN--YSSRLKVS----------- 198
G I ++ +I E L FL ++ LD ++ Y+ +L +
Sbjct: 458 GV-ITENPVWIIMELCTLGELRSFL--QVRKFSLDLASLILYAYQLSTALAYLESKRFVH 514
Query: 199 ------NILLDKDINPKISDFGMAR-ICGGNELQANTSRIVGTYGYMSPEYAIQGIFSIK 251
N+L+ + K+ DFG++R + +A+ ++ +M+PE F+
Sbjct: 515 RDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKL--PIKWMAPESINFRRFTSA 572
Query: 252 SDVFSFGVLLLEIV 265
SDV+ FGV + EI+
Sbjct: 573 SDVWMFGVCMWEIL 586
>pdb|2QLU|A Chain A, Crystal Structure Of Activin Receptor Type Ii Kinase
Domain From Human
Length = 314
Score = 41.6 bits (96), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 25/78 (32%), Positives = 41/78 (52%), Gaps = 7/78 (8%)
Query: 195 LKVSNILLDKDINPKISDFGMARICGGNELQANTSRIVGTYGYMSPEYAIQGIFSIKSDV 254
K N+LL D+ ++DFG+A + +T VGT YM+PE ++G + + D
Sbjct: 149 FKSKNVLLKSDLTAVLADFGLAVRFEPGKPPGDTHGQVGTRRYMAPE-VLEGAINFQRDA 207
Query: 255 F------SFGVLLLEIVS 266
F + G++L E+VS
Sbjct: 208 FLRIDMYAMGLVLWELVS 225
>pdb|2VZ6|A Chain A, Structure Of Human Calcium Calmodulin Dependent Protein
Kinase Type Ii Alpha (Camk2a) In Complex With Indirubin
E804
pdb|2VZ6|B Chain B, Structure Of Human Calcium Calmodulin Dependent Protein
Kinase Type Ii Alpha (Camk2a) In Complex With Indirubin
E804
Length = 313
Score = 41.2 bits (95), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 49/195 (25%), Positives = 83/195 (42%), Gaps = 24/195 (12%)
Query: 95 NKLGEGGFGPVYKGV-LKKGDEIAVKRLPGR--SGQGLREMKNEASVIAKVQHKNLVRLL 151
+LG+G F V + V + G E A K + + S + ++++ EA + ++H N+VRL
Sbjct: 28 EELGKGAFSVVRRCVKVLAGQEYAAKIINTKKLSARDHQKLEREARICRLLKHPNIVRLH 87
Query: 152 GCCIDKDEKILIY---------------EYMPNKSLDFFLFDPTKRMLLDWSANYSSR-L 195
++ LI+ EY + + +L R L
Sbjct: 88 DSISEEGHHYLIFDLVTGGELFEDIVAREYYSEADASHCIQQILEAVLHCHQMGVVHRDL 147
Query: 196 KVSNILLD---KDINPKISDFGMARICGGNELQANTSRIVGTYGYMSPEYAIQGIFSIKS 252
K N+LL K K++DFG+A G Q GT GY+SPE + +
Sbjct: 148 KPENLLLASKLKGAAVKLADFGLAIEVEGE--QQAWFGFAGTPGYLSPEVLRKDPYGKPV 205
Query: 253 DVFSFGVLLLEIVSG 267
D+++ GV+L ++ G
Sbjct: 206 DLWACGVILYILLVG 220
>pdb|1KOB|A Chain A, Twitchin Kinase Fragment (Aplysia), Autoregulated Protein
Kinase Domain
pdb|1KOB|B Chain B, Twitchin Kinase Fragment (Aplysia), Autoregulated Protein
Kinase Domain
Length = 387
Score = 41.2 bits (95), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 47/192 (24%), Positives = 81/192 (42%), Gaps = 23/192 (11%)
Query: 96 KLGEGGFGPVYKGVLKKGDEIAVKRLPGRSGQ-GLREMKNEASVIAKVQHKNLVRLLGCC 154
+LG G FG V++ V K + V + +KNE S++ ++ H L+ L
Sbjct: 58 ELGSGAFGVVHRCVEKATGRVFVAKFINTPYPLDKYTVKNEISIMNQLHHPKLINLHDAF 117
Query: 155 IDKDEKILIYEYMPNKSLDFFLFDPTKRMLLDWSANYSSR-----------------LKV 197
DK E +LI E++ L + +M NY + +K
Sbjct: 118 EDKYEMVLILEFLSGGELFDRIAAEDYKMSEAEVINYMRQACEGLKHMHEHSIVHLDIKP 177
Query: 198 SNILLD--KDINPKISDFGMARICGGNELQANTSRIVGTYGYMSPEYAIQGIFSIKSDVF 255
NI+ + K + KI DFG+A +E+ T+ T + +PE + +D++
Sbjct: 178 ENIMCETKKASSVKIIDFGLATKLNPDEIVKVTT---ATAEFAAPEIVDREPVGFYTDMW 234
Query: 256 SFGVLLLEIVSG 267
+ GVL ++SG
Sbjct: 235 AIGVLGYVLLSG 246
>pdb|2WEL|A Chain A, Crystal Structure Of Su6656-Bound CalciumCALMODULIN-
Dependent Protein Kinase Ii Delta In Complex With
Calmodulin
Length = 327
Score = 41.2 bits (95), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 49/205 (23%), Positives = 97/205 (47%), Gaps = 26/205 (12%)
Query: 86 TATNKFSDANKLGEGGFGPVYKGV-LKKGDEIAVKRLPGR--SGQGLREMKNEASVIAKV 142
+ T+++ +LG+G F V + + + G E A K + + S + ++++ EA + +
Sbjct: 1 SMTDEYQLFEELGKGAFSVVRRCMKIPTGQEYAAKIINTKKLSARDHQKLEREARICRLL 60
Query: 143 QHKNLVRLLGCCIDKDEKILIYEYMPNKSL-------DFFL-FDPTK--RMLLDWSANYS 192
+H N+VRL ++ L+++ + L +++ D + + +L+ S N+
Sbjct: 61 KHPNIVRLHDSISEEGFHYLVFDLVTGGELFEDIVAREYYSEADASHCIQQILE-SVNHC 119
Query: 193 S-------RLKVSNILL---DKDINPKISDFGMARICGGNELQANTSRIVGTYGYMSPEY 242
LK N+LL K K++DFG+A G+ Q GT GY+SPE
Sbjct: 120 HLNGIVHRDLKPENLLLASKSKGAAVKLADFGLAIEVQGD--QQAWFGFAGTPGYLSPEV 177
Query: 243 AIQGIFSIKSDVFSFGVLLLEIVSG 267
+ + D+++ GV+L ++ G
Sbjct: 178 LRKDPYGKPVDMWACGVILYILLVG 202
>pdb|2JKK|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
pdb|2JKO|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 41.2 bits (95), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 47/192 (24%), Positives = 85/192 (44%), Gaps = 26/192 (13%)
Query: 97 LGEGGFGPVYKGVLKKGDE----IAVKRLPGRSGQGLRE-MKNEASVIAKVQHKNLVRLL 151
+GEG FG V++G+ + +A+K + +RE EA + + H ++V+L+
Sbjct: 18 IGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLI 77
Query: 152 GCCIDKDEKILIYEYMPNKSLDFFL----FDPTKRMLLDWSANYSSRLK----------- 196
G I ++ +I E L FL F L+ ++ S+ L
Sbjct: 78 GV-ITENPVWIIMELCTLGELRSFLQVRKFSLDLASLILYAYQLSTALAYLESKRFVHRD 136
Query: 197 --VSNILLDKDINPKISDFGMAR-ICGGNELQANTSRIVGTYGYMSPEYAIQGIFSIKSD 253
N+L+ K+ DFG++R + +A+ ++ +M+PE F+ SD
Sbjct: 137 IAARNVLVSATDCVKLGDFGLSRYMEDSTYYKASKGKL--PIKWMAPESINFRRFTSASD 194
Query: 254 VFSFGVLLLEIV 265
V+ FGV + EI+
Sbjct: 195 VWMFGVCMWEIL 206
>pdb|2VN9|A Chain A, Crystal Structure Of Human Calcium Calmodulin Dependent
Protein Kinase Ii Delta Isoform 1, Camkd
pdb|2VN9|B Chain B, Crystal Structure Of Human Calcium Calmodulin Dependent
Protein Kinase Ii Delta Isoform 1, Camkd
Length = 301
Score = 41.2 bits (95), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 49/205 (23%), Positives = 97/205 (47%), Gaps = 26/205 (12%)
Query: 86 TATNKFSDANKLGEGGFGPVYKGV-LKKGDEIAVKRLPGR--SGQGLREMKNEASVIAKV 142
+ T+++ +LG+G F V + + + G E A K + + S + ++++ EA + +
Sbjct: 1 SMTDEYQLFEELGKGAFSVVRRCMKIPTGQEYAAKIINTKKLSARDHQKLEREARICRLL 60
Query: 143 QHKNLVRLLGCCIDKDEKILIYEYMPNKSL-------DFFL-FDPTK--RMLLDWSANYS 192
+H N+VRL ++ L+++ + L +++ D + + +L+ S N+
Sbjct: 61 KHPNIVRLHDSISEEGFHYLVFDLVTGGELFEDIVAREYYSEADASHCIQQILE-SVNHC 119
Query: 193 S-------RLKVSNILL---DKDINPKISDFGMARICGGNELQANTSRIVGTYGYMSPEY 242
LK N+LL K K++DFG+A G+ Q GT GY+SPE
Sbjct: 120 HLNGIVHRDLKPENLLLASKSKGAAVKLADFGLAIEVQGD--QQAWFGFAGTPGYLSPEV 177
Query: 243 AIQGIFSIKSDVFSFGVLLLEIVSG 267
+ + D+++ GV+L ++ G
Sbjct: 178 LRKDPYGKPVDMWACGVILYILLVG 202
>pdb|3KN5|A Chain A, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
In With Amp-Pnp
pdb|3KN5|B Chain B, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
In With Amp-Pnp
pdb|3KN6|A Chain A, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
pdb|3KN6|B Chain B, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
Length = 325
Score = 40.8 bits (94), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 51/195 (26%), Positives = 82/195 (42%), Gaps = 30/195 (15%)
Query: 97 LGEGGFGPVYKGVLKKGDE-IAVKRLPGRSGQGLREMKNEASVIAKVQ-HKNLVRLLGCC 154
LGEG F K V KK ++ AVK + R ++ E + + + H N+V+L
Sbjct: 19 LGEGSFSICRKCVHKKSNQAFAVKIISKRMEANTQK---EITALKLCEGHPNIVKLHEVF 75
Query: 155 IDKDEKILIYEYMPNKSLDFFLFDPTKRMLLDWSANYSSRLKVSNI-------LLDKDIN 207
D+ L+ E + L F K+ + A+Y R VS + ++ +D+
Sbjct: 76 HDQLHTFLVMELLNGGEL--FERIKKKKHFSETEASYIMRKLVSAVSHMHDVGVVHRDLK 133
Query: 208 P--------------KISDFGMARICGGNELQANTSRIVGTYGYMSPEYAIQGIFSIKSD 253
P KI DFG AR+ + T T Y +PE Q + D
Sbjct: 134 PENLLFTDENDNLEIKIIDFGFARLKPPDNQPLKTPCF--TLHYAAPELLNQNGYDESCD 191
Query: 254 VFSFGVLLLEIVSGK 268
++S GV+L ++SG+
Sbjct: 192 LWSLGVILYTMLSGQ 206
>pdb|3VN9|A Chain A, Rifined Crystal Structure Of Non-Phosphorylated Map2k6 In
A Putative Auto-Inhibition State
Length = 340
Score = 40.8 bits (94), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 38/154 (24%), Positives = 75/154 (48%), Gaps = 35/154 (22%)
Query: 195 LKVSNILLDKDINPKISDFGMARICGGNELQANTSRI-VGTYGYMSPEYAI----QGIFS 249
+K SN+L++ K+ DFG++ G + + I G YM+PE Q +S
Sbjct: 180 VKPSNVLINALGQVKMCDFGIS----GYLVDSVAKTIDAGCKPYMAPERINPELNQKGYS 235
Query: 250 IKSDVFSFGVLLLEIVSGKKTTGFYRTDSLTLLGYAWDLWTS-----NRTLELIDPIL-E 303
+KSD++S G+ ++E L +L + +D W + + +E P L
Sbjct: 236 VKSDIWSLGITMIE---------------LAILRFPYDSWGTPFQQLKQVVEEPSPQLPA 280
Query: 304 DEYSSKHMLLRYVNIALLCVQESADDRPTMNEVV 337
D++S++ +V+ C+++++ +RPT E++
Sbjct: 281 DKFSAE-----FVDFTSQCLKKNSKERPTYPELM 309
>pdb|2Y7J|A Chain A, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|B Chain B, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|C Chain C, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|D Chain D, Structure Of Human Phosphorylase Kinase, Gamma 2
Length = 365
Score = 40.8 bits (94), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 54/227 (23%), Positives = 100/227 (44%), Gaps = 39/227 (17%)
Query: 74 DQLPLFSFSSVSTATNKFSDANKLGEGGFGPVYKGVLKK-GDEIAVK-------RLPGRS 125
D+LP +++ K+ + +G G V + V + G E AVK RL
Sbjct: 81 DELP--DWAAAKEFYQKYDPKDVIGRGVSSVVRRCVHRATGHEFAVKIMEVTAERLSPEQ 138
Query: 126 GQGLREM-KNEASVIAKVQ-HKNLVRLLGCCIDKDEKILIYEYMPNKSLDFFLFDPTK-- 181
+ +RE + E ++ +V H +++ L+ L+++ M L +L +
Sbjct: 139 LEEVREATRRETHILRQVAGHPHIITLIDSYESSSFMFLVFDLMRKGELFDYLTEKVALS 198
Query: 182 --------RMLLD-----WSANYSSR-LKVSNILLDKDINPKISDFGMA-RICGGNELQA 226
R LL+ + N R LK NILLD ++ ++SDFG + + G +L+
Sbjct: 199 EKETRSIMRSLLEAVSFLHANNIVHRDLKPENILLDDNMQIRLSDFGFSCHLEPGEKLR- 257
Query: 227 NTSRIVGTYGYMSPEY------AIQGIFSIKSDVFSFGVLLLEIVSG 267
+ GT GY++PE + + D+++ GV+L +++G
Sbjct: 258 ---ELCGTPGYLAPEILKCSMDETHPGYGKEVDLWACGVILFTLLAG 301
>pdb|2J0K|A Chain A, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains.
pdb|2J0K|B Chain B, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains
Length = 656
Score = 40.4 bits (93), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 47/194 (24%), Positives = 88/194 (45%), Gaps = 30/194 (15%)
Query: 97 LGEGGFGPVYKGVLKKGDE----IAVKRLPGRSGQGLRE-MKNEASVIAKVQHKNLVRLL 151
+GEG FG V++G+ + +A+K + +RE EA + + H ++V+L+
Sbjct: 398 IGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLI 457
Query: 152 GCCIDKDEKILIYEYMPNKSLDFFLFDPTKRMLLDWSAN--YSSRLKVS----------- 198
G I ++ +I E L FL ++ LD ++ Y+ +L +
Sbjct: 458 GV-ITENPVWIIMELCTLGELRSFL--QVRKFSLDLASLILYAYQLSTALAYLESKRFVH 514
Query: 199 ------NILLDKDINPKISDFGMAR-ICGGNELQANTSRIVGTYGYMSPEYAIQGIFSIK 251
N+L+ K+ DFG++R + +A+ ++ +M+PE F+
Sbjct: 515 RDIAARNVLVSATDCVKLGDFGLSRYMEDSTYYKASKGKL--PIKWMAPESINFRRFTSA 572
Query: 252 SDVFSFGVLLLEIV 265
SDV+ FGV + EI+
Sbjct: 573 SDVWMFGVCMWEIL 586
>pdb|4EUT|A Chain A, Structure Of Bx-795 Complexed With Unphosphorylated Human
Tbk1 Kinase- Uld Domain
pdb|4EUT|B Chain B, Structure Of Bx-795 Complexed With Unphosphorylated Human
Tbk1 Kinase- Uld Domain
Length = 396
Score = 40.4 bits (93), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 60/225 (26%), Positives = 97/225 (43%), Gaps = 48/225 (21%)
Query: 83 SVSTATNKFSDANKLGEGGFGPVYKGVLKK-GDEIAVKRLPGRSGQGLREMK---NEASV 138
S ST+ + + ++ LG+G V++G KK GD A+K S LR + E V
Sbjct: 3 SQSTSNHLWLLSDILGQGATANVFRGRHKKTGDLFAIKVFNNISF--LRPVDVQMREFEV 60
Query: 139 IAKVQHKNLVRLLGCCIDKD----EKILIYEYMPNKSLDFFLFDPTKRMLLDWS------ 188
+ K+ HKN+V+L I+++ K+LI E+ P SL L +P+ L S
Sbjct: 61 LKKLNHKNIVKLF--AIEEETTTRHKVLIMEFCPCGSLYTVLEEPSNAYGLPESEFLIVL 118
Query: 189 ---ANYSSRLKVSNILLDKDINP---------------KISDFGMARICGGNELQANTSR 230
+ L+ N ++ ++I P K++DFG AR +E
Sbjct: 119 RDVVGGMNHLR-ENGIVHRNIKPGNIMRVIGEDGQSVYKLTDFGAARELEDDE---QFVS 174
Query: 231 IVGTYGYMSP---EYAI-----QGIFSIKSDVFSFGVLLLEIVSG 267
+ GT Y+ P E A+ Q + D++S GV +G
Sbjct: 175 LYGTEEYLHPDMYERAVLRKDHQKKYGATVDLWSIGVTFYHAATG 219
>pdb|3H9F|A Chain A, Crystal Structure Of Human Dual Specificity Protein Kinase
(Ttk) In Complex With A Pyrimido-Diazepin Ligand
Length = 313
Score = 40.4 bits (93), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 61/225 (27%), Positives = 97/225 (43%), Gaps = 45/225 (20%)
Query: 81 FSSVSTATNKFSDANKLGEGGFGPVYKGVLKKGDEIAVK--RLPGRSGQGLREMKNEASV 138
F S+S +S ++G GG V++ + +K A+K L Q L +NE +
Sbjct: 20 FQSMSVKGRIYSILKQIGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAY 79
Query: 139 IAKVQHKN--LVRLLGCCIDKDEKILIYEYMPNKSLDFFL-----FDPTKR------ML- 184
+ K+Q + ++RL I D+ I + N L+ +L DP +R ML
Sbjct: 80 LNKLQQHSDKIIRLYDYEI-TDQYIYMVMECGNIDLNSWLKKKKSIDPWERKSYWKNMLE 138
Query: 185 ----LDWSANYSSRLKVSNILLDKDINPKISDFGMARICGGNELQANTSRI-----VGTY 235
+ S LK +N L+ D K+ DFG+A N++Q + + VGT
Sbjct: 139 AVHTIHQHGIVHSDLKPANFLI-VDGMLKLIDFGIA-----NQMQPDXXXVVKDSQVGTV 192
Query: 236 GYMSPEYAIQGIFSIKS------------DVFSFGVLLLEIVSGK 268
YM PE AI+ + S + DV+S G +L + GK
Sbjct: 193 NYMPPE-AIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGK 236
>pdb|2DYL|A Chain A, Crystal Structure Of Human Mitogen-Activated Protein
Kinase Kinase 7 Activated Mutant (S287d, T291d)
Length = 318
Score = 40.4 bits (93), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 52/205 (25%), Positives = 82/205 (40%), Gaps = 28/205 (13%)
Query: 89 NKFSDANKLGEGGFGPVYKGVLKK-GDEIAVK--RLPGRSGQGLREMKNEASVIAKVQHK 145
N + ++G G G V+K +K G IAVK R G + R + + V+
Sbjct: 25 NDLENLGEMGSGTCGQVWKMRFRKTGHVIAVKQMRRSGNKEENKRILMDLDVVLKSHDCP 84
Query: 146 NLVRLLGCCIDKDEKILIYEYM---------------PNKSLDFFLFDPTKRM--LLDWS 188
+V+ G I + + E M P + L K + L +
Sbjct: 85 YIVQCFGTFITNTDVFIAMELMGTCAEKLKKRMQGPIPERILGKMTVAIVKALYYLKEKH 144
Query: 189 ANYSSRLKVSNILLDKDINPKISDFGMARICGGNELQANTSRIVGTYGYMSPEY-----A 243
+K SNILLD+ K+ DFG I G R G YM+PE
Sbjct: 145 GVIHRDVKPSNILLDERGQIKLCDFG---ISGRLVDDKAKDRSAGCAAYMAPERIDPPDP 201
Query: 244 IQGIFSIKSDVFSFGVLLLEIVSGK 268
+ + I++DV+S G+ L+E+ +G+
Sbjct: 202 TKPDYDIRADVWSLGISLVELATGQ 226
>pdb|4EUU|A Chain A, Structure Of Bx-795 Complexed With Human Tbk1 Kinase
Domain Phosphorylated On Ser172
pdb|4EUU|B Chain B, Structure Of Bx-795 Complexed With Human Tbk1 Kinase
Domain Phosphorylated On Ser172
Length = 319
Score = 40.0 bits (92), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 61/228 (26%), Positives = 99/228 (43%), Gaps = 52/228 (22%)
Query: 82 SSVSTATNKFSDANKLGEGGFGPVYKGVLKK-GDEIAVKRLPGRSGQGLREMK---NEAS 137
S ST+ + + ++ LG+G V++G KK GD A+K S LR + E
Sbjct: 2 GSQSTSNHLWLLSDILGQGATANVFRGRHKKTGDLFAIKVFNNISF--LRPVDVQMREFE 59
Query: 138 VIAKVQHKNLVRLLGCCIDKD----EKILIYEYMPNKSLDFFLFDPTKRMLLDWS----- 188
V+ K+ HKN+V+L I+++ K+LI E+ P SL L +P+ L S
Sbjct: 60 VLKKLNHKNIVKLF--AIEEETTTRHKVLIMEFCPCGSLYTVLEEPSNAYGLPESEFLIV 117
Query: 189 ----ANYSSRLKVSNILLDKDINP---------------KISDFGMARICGGNELQANTS 229
+ L+ N ++ ++I P K++DFG AR EL+ +
Sbjct: 118 LRDVVGGMNHLR-ENGIVHRNIKPGNIMRVIGEDGQSVYKLTDFGAAR-----ELEDDEQ 171
Query: 230 --RIVGTYGYMSP---EYAI-----QGIFSIKSDVFSFGVLLLEIVSG 267
+ GT Y+ P E A+ Q + D++S GV +G
Sbjct: 172 FVXLYGTEEYLHPDMYERAVLRKDHQKKYGATVDLWSIGVTFYHAATG 219
>pdb|3DLS|A Chain A, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|B Chain B, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|C Chain C, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|D Chain D, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|E Chain E, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|F Chain F, Crystal Structure Of Human Pas Kinase Bound To Adp
Length = 335
Score = 40.0 bits (92), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 51/206 (24%), Positives = 87/206 (42%), Gaps = 32/206 (15%)
Query: 88 TNKFSDANKLGEGGFGPVYKGVLK-KGDEIAVKRLPGR--------SGQGLREMKNEASV 138
+ K+S + LG G FG V+ V K K E+ VK + L ++ E ++
Sbjct: 23 SQKYSTMSPLGSGAFGFVWTAVDKEKNKEVVVKFIKKEKVLEDCWIEDPKLGKVTLEIAI 82
Query: 139 IAKVQHKNLVRLLGCCIDKDEKILIYEYMPNKSLDFFLFDPTKRMLLDWSANYSSRLKVS 198
+++V+H N++++L ++ L+ E LD F F L + A+Y R VS
Sbjct: 83 LSRVEHANIIKVLDIFENQGFFQLVMEKH-GSGLDLFAFIDRHPRLDEPLASYIFRQLVS 141
Query: 199 ------------------NILLDKDINPKISDFGMARICGGNELQANTSRIVGTYGYMSP 240
NI++ +D K+ DFG A +L GT Y +P
Sbjct: 142 AVGYLRLKDIIHRDIKDENIVIAEDFTIKLIDFGSAAYLERGKL---FYTFCGTIEYCAP 198
Query: 241 EYAIQGIF-SIKSDVFSFGVLLLEIV 265
E + + + +++S GV L +V
Sbjct: 199 EVLMGNPYRGPELEMWSLGVTLYTLV 224
>pdb|1QL6|A Chain A, The Catalytic Mechanism Of Phosphorylase Kinase Probed By
Mutational Studies
Length = 298
Score = 39.3 bits (90), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 25/80 (31%), Positives = 47/80 (58%), Gaps = 11/80 (13%)
Query: 195 LKVSNILLDKDINPKISDFGMA-RICGGNELQANTSRIVGTYGYMSPEYAIQGI------ 247
LK NILLD D+N K++DFG + ++ G +L++ + GT Y++PE +
Sbjct: 150 LKPENILLDDDMNIKLTDFGFSCQLDPGEKLRS----VCGTPSYLAPEIIECSMNDNHPG 205
Query: 248 FSIKSDVFSFGVLLLEIVSG 267
+ + D++S GV++ +++G
Sbjct: 206 YGKEVDMWSTGVIMYTLLAG 225
>pdb|3LIJ|A Chain A, Crystal Structure Of Full Length Cpcdpk3 (Cgd5_820) In
Complex With Ca2+ And Amppnp
Length = 494
Score = 38.9 bits (89), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 55/216 (25%), Positives = 86/216 (39%), Gaps = 34/216 (15%)
Query: 78 LFSFSSVSTATNKFSDANKLGEGGFGPVY---KGVLKKGDEIAVKRLPGRSGQGLREMKN 134
+F S + + KLG G +G V V I + R S ++
Sbjct: 26 MFITSKKGHLSEMYQRVKKLGSGAYGEVLLCRDKVTHVERAIKIIRKTSVSTSSNSKLLE 85
Query: 135 EASVIAKVQHKNLVRLLGCCIDKDEKILIYEYMPNKSLDFFLFDPT-KRMLLD------- 186
E +V+ + H N+++L DK L+ E L FD RM +
Sbjct: 86 EVAVLKLLDHPNIMKLYDFFEDKRNYYLVMECYKGGEL----FDEIIHRMKFNEVDAAVI 141
Query: 187 -----------WSANYSSR-LKVSNILLD---KDINPKISDFGMARICGGNELQANTSRI 231
N R LK N+LL+ KD KI DFG++ + E Q
Sbjct: 142 IKQVLSGVTYLHKHNIVHRDLKPENLLLESKEKDALIKIVDFGLSAVF---ENQKKMKER 198
Query: 232 VGTYGYMSPEYAIQGIFSIKSDVFSFGVLLLEIVSG 267
+GT Y++PE ++ + K DV+S GV+L +++G
Sbjct: 199 LGTAYYIAPE-VLRKKYDEKCDVWSIGVILFILLAG 233
>pdb|2Y4I|B Chain B, Ksr2-Mek1 Heterodimer
Length = 319
Score = 38.9 bits (89), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 62/278 (22%), Positives = 109/278 (39%), Gaps = 55/278 (19%)
Query: 97 LGEGGFGPVYKGVLKKGDEIAVKRLPGRSGQGLREMKNEASVIAKVQHKNLVRLLGCCID 156
+G+G FG VY G I + + + L+ K E + +H+N+V +G C+
Sbjct: 41 IGKGRFGQVYHGRWHGEVAIRLIDIERDNEDQLKAFKREVMAYRQTRHENVVLFMGACMS 100
Query: 157 KDEKILIYEYMPNKSLDFFLFDPTKRMLLDWSANYSSRLKVSNI----------LLDKDI 206
+I ++L + D +++LD N + ++ + +L KD+
Sbjct: 101 PPHLAIITSLCKGRTLYSVVRD--AKIVLD--VNKTRQIAQEIVKGMGYLHAKGILHKDL 156
Query: 207 NPK----------ISDFGMARICGGNELQANTS----RIV-GTYGYMSPEYAIQGI---- 247
K I+DFG+ I G LQA RI G +++PE Q
Sbjct: 157 KSKNVFYDNGKVVITDFGLFSISG--VLQAGRREDKLRIQNGWLCHLAPEIIRQLSPDTE 214
Query: 248 -----FSIKSDVFSFGVLLLEIVSGKKTTGFYRTDSLTLLGYAWDLWTSNRTLELIDPIL 302
FS SDVF+ G + E+ + + ++T + W + T +
Sbjct: 215 EDKLPFSKHSDVFALGTIWYELHAREWP---FKTQPAEAI--IWQMGTG----------M 259
Query: 303 EDEYSSKHMLLRYVNIALLCVQESADDRPTMNEVVSML 340
+ S M +I L C ++RPT +++ ML
Sbjct: 260 KPNLSQIGMGKEISDILLFCWAFEQEERPTFTKLMDML 297
>pdb|2JAM|A Chain A, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase I G
pdb|2JAM|B Chain B, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase I G
Length = 304
Score = 38.9 bits (89), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 42/193 (21%), Positives = 84/193 (43%), Gaps = 28/193 (14%)
Query: 97 LGEGGFGPVYKGVLKK---GDEIAVKRLPGRSGQGLREMKNEASVIAKVQHKNLVRLLGC 153
LG G F V+ ++K+ G A+K + ++NE +V+ K++H+N+V L
Sbjct: 17 LGSGAFSEVF--LVKQRLTGKLFALKCIKKSPAFRDSSLENEIAVLKKIKHENIVTLEDI 74
Query: 154 CIDKDEKILIYEYMP-----NKSLDFFLFDPTKRMLLDWSANYSSRLKVSNILLDKDINP 208
L+ + + ++ L+ ++ L+ + + N ++ +D+ P
Sbjct: 75 YESTTHYYLVMQLVSGGELFDRILERGVYTEKDASLVIQQVLSAVKYLHENGIVHRDLKP 134
Query: 209 K--------------ISDFGMARICGGNELQANTSRIVGTYGYMSPEYAIQGIFSIKSDV 254
+ I+DFG++++ E S GT GY++PE Q +S D
Sbjct: 135 ENLLYLTPEENSKIMITDFGLSKM----EQNGIMSTACGTPGYVAPEVLAQKPYSKAVDC 190
Query: 255 FSFGVLLLEIVSG 267
+S GV+ ++ G
Sbjct: 191 WSIGVITYILLCG 203
>pdb|3V8S|A Chain A, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|B Chain B, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|C Chain C, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|D Chain D, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3TV7|A Chain A, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|B Chain B, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|C Chain C, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|D Chain D, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TWJ|A Chain A, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|B Chain B, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|C Chain C, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|D Chain D, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
Length = 410
Score = 38.9 bits (89), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 53/211 (25%), Positives = 83/211 (39%), Gaps = 35/211 (16%)
Query: 97 LGEGGFGPVYKGVLKKGDEIAVKRLPGRSGQGLRE----MKNEASVIAKVQHKNLVRLLG 152
+G G FG V K ++ +L + R E ++A +V+L
Sbjct: 77 IGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANSPWVVQLFY 136
Query: 153 CCIDKDEKILIYEYMPNKSLDFFL--FDPTKRMLLDWSANYSSRL--------------- 195
D ++ EYMP L + +D ++ W+ Y++ +
Sbjct: 137 AFQDDRYLYMVMEYMPGGDLVNLMSNYDVPEK----WARFYTAEVVLALDAIHSMGFIHR 192
Query: 196 --KVSNILLDKDINPKISDFGMARICGGNELQANTSRIVGTYGYMSPEY----AIQGIFS 249
K N+LLDK + K++DFG + E VGT Y+SPE G +
Sbjct: 193 DVKPDNMLLDKSGHLKLADFGTC-MKMNKEGMVRCDTAVGTPDYISPEVLKSQGGDGYYG 251
Query: 250 IKSDVFSFGVLLLEIVSGKKTTGFYRTDSLT 280
+ D +S GV L E++ G T FY DSL
Sbjct: 252 RECDWWSVGVFLYEMLVGD--TPFY-ADSLV 279
>pdb|1PHK|A Chain A, Two Structures Of The Catalytic Domain Of Phosphorylase,
Kinase: An Active Protein Kinase Complexed With
Nucleotide, Substrate-Analogue And Product
Length = 298
Score = 38.9 bits (89), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 27/95 (28%), Positives = 52/95 (54%), Gaps = 13/95 (13%)
Query: 195 LKVSNILLDKDINPKISDFGMA-RICGGNELQANTSRIVGTYGYMSPEYAIQGI------ 247
LK NILLD D+N K++DFG + ++ G +L+ + GT Y++PE +
Sbjct: 150 LKPENILLDDDMNIKLTDFGFSCQLDPGEKLR----EVCGTPSYLAPEIIECSMNDNHPG 205
Query: 248 FSIKSDVFSFGVLLLEIVSGKKTTGFYRTDSLTLL 282
+ + D++S GV++ +++G + F+ + +L
Sbjct: 206 YGKEVDMWSTGVIMYTLLAG--SPPFWHRKQMLML 238
>pdb|2ESM|A Chain A, Crystal Structure Of Rock 1 Bound To Fasudil
pdb|2ESM|B Chain B, Crystal Structure Of Rock 1 Bound To Fasudil
pdb|2ETK|A Chain A, Crystal Structure Of Rock 1 Bound To Hydroxyfasudil
pdb|2ETK|B Chain B, Crystal Structure Of Rock 1 Bound To Hydroxyfasudil
pdb|2ETR|A Chain A, Crystal Structure Of Rock I Bound To Y-27632
pdb|2ETR|B Chain B, Crystal Structure Of Rock I Bound To Y-27632
pdb|3D9V|A Chain A, Crystal Structure Of Rock I Bound To H-1152p A Di-
Methylated Variant Of Fasudil
pdb|3D9V|B Chain B, Crystal Structure Of Rock I Bound To H-1152p A Di-
Methylated Variant Of Fasudil
pdb|3NCZ|A Chain A, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|B Chain B, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|C Chain C, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|D Chain D, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NDM|A Chain A, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|B Chain B, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|C Chain C, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|D Chain D, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
Length = 415
Score = 38.9 bits (89), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 53/211 (25%), Positives = 83/211 (39%), Gaps = 35/211 (16%)
Query: 97 LGEGGFGPVYKGVLKKGDEIAVKRLPGRSGQGLRE----MKNEASVIAKVQHKNLVRLLG 152
+G G FG V K ++ +L + R E ++A +V+L
Sbjct: 82 IGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANSPWVVQLFY 141
Query: 153 CCIDKDEKILIYEYMPNKSLDFFL--FDPTKRMLLDWSANYSSRL--------------- 195
D ++ EYMP L + +D ++ W+ Y++ +
Sbjct: 142 AFQDDRYLYMVMEYMPGGDLVNLMSNYDVPEK----WARFYTAEVVLALDAIHSMGFIHR 197
Query: 196 --KVSNILLDKDINPKISDFGMARICGGNELQANTSRIVGTYGYMSPEY----AIQGIFS 249
K N+LLDK + K++DFG + E VGT Y+SPE G +
Sbjct: 198 DVKPDNMLLDKSGHLKLADFGTC-MKMNKEGMVRCDTAVGTPDYISPEVLKSQGGDGYYG 256
Query: 250 IKSDVFSFGVLLLEIVSGKKTTGFYRTDSLT 280
+ D +S GV L E++ G T FY DSL
Sbjct: 257 RECDWWSVGVFLYEMLVGD--TPFY-ADSLV 284
>pdb|2V55|A Chain A, Mechanism Of Multi-site Phosphorylation From A Rock-i:rhoe
Complex Structure
pdb|2V55|C Chain C, Mechanism Of Multi-site Phosphorylation From A Rock-i:rhoe
Complex Structure
Length = 406
Score = 38.9 bits (89), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 53/211 (25%), Positives = 83/211 (39%), Gaps = 35/211 (16%)
Query: 97 LGEGGFGPVYKGVLKKGDEIAVKRLPGRSGQGLRE----MKNEASVIAKVQHKNLVRLLG 152
+G G FG V K ++ +L + R E ++A +V+L
Sbjct: 82 IGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANSPWVVQLFY 141
Query: 153 CCIDKDEKILIYEYMPNKSLDFFL--FDPTKRMLLDWSANYSSRL--------------- 195
D ++ EYMP L + +D ++ W+ Y++ +
Sbjct: 142 AFQDDRYLYMVMEYMPGGDLVNLMSNYDVPEK----WARFYTAEVVLALDAIHSMGFIHR 197
Query: 196 --KVSNILLDKDINPKISDFGMARICGGNELQANTSRIVGTYGYMSPEY----AIQGIFS 249
K N+LLDK + K++DFG + E VGT Y+SPE G +
Sbjct: 198 DVKPDNMLLDKSGHLKLADFGTC-MKMNKEGMVRCDTAVGTPDYISPEVLKSQGGDGYYG 256
Query: 250 IKSDVFSFGVLLLEIVSGKKTTGFYRTDSLT 280
+ D +S GV L E++ G T FY DSL
Sbjct: 257 RECDWWSVGVFLYEMLVGD--TPFY-ADSLV 284
>pdb|2PHK|A Chain A, The Crystal Structure Of A Phosphorylase Kinase Peptide
Substrate Complex: Kinase Substrate Recognition
Length = 277
Score = 38.9 bits (89), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 27/95 (28%), Positives = 52/95 (54%), Gaps = 13/95 (13%)
Query: 195 LKVSNILLDKDINPKISDFGMA-RICGGNELQANTSRIVGTYGYMSPEYAIQGI------ 247
LK NILLD D+N K++DFG + ++ G +L+ + GT Y++PE +
Sbjct: 137 LKPENILLDDDMNIKLTDFGFSCQLDPGEKLR----EVCGTPSYLAPEIIECSMNDNHPG 192
Query: 248 FSIKSDVFSFGVLLLEIVSGKKTTGFYRTDSLTLL 282
+ + D++S GV++ +++G + F+ + +L
Sbjct: 193 YGKEVDMWSTGVIMYTLLAG--SPPFWHRKQMLML 225
>pdb|3FME|A Chain A, Crystal Structure Of Human Mitogen-Activated Protein
Kinase Kinase 6 (Mek6) Activated Mutant (S207d, T211d)
Length = 290
Score = 38.5 bits (88), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 37/156 (23%), Positives = 76/156 (48%), Gaps = 37/156 (23%)
Query: 195 LKVSNILLDKDINPKISDFGMARICGGNELQANTSRIV--GTYGYMSPEYAI----QGIF 248
+K SN+L++ K+ DFG++ L + ++ + G YM+PE Q +
Sbjct: 136 VKPSNVLINALGQVKMCDFGIS-----GYLVDDVAKDIDAGCKPYMAPERINPELNQKGY 190
Query: 249 SIKSDVFSFGVLLLEIVSGKKTTGFYRTDSLTLLGYAWDLWTS-----NRTLELIDPIL- 302
S+KSD++S G+ ++E L +L + +D W + + +E P L
Sbjct: 191 SVKSDIWSLGITMIE---------------LAILRFPYDSWGTPFQQLKQVVEEPSPQLP 235
Query: 303 EDEYSSKHMLLRYVNIALLCVQESADDRPTMNEVVS 338
D++S++ +V+ C+++++ +RPT E++
Sbjct: 236 ADKFSAE-----FVDFTSQCLKKNSKERPTYPELMQ 266
>pdb|4AW2|A Chain A, Crystal Structure Of Cdc42 Binding Protein Kinase Alpha
(Mrck Alpha)
Length = 437
Score = 38.1 bits (87), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 47/205 (22%), Positives = 87/205 (42%), Gaps = 31/205 (15%)
Query: 97 LGEGGFGPVYKGVLKKGDEIAVKRLPGRSGQGLRE----MKNEASVIAKVQHKNLVRLLG 152
+G G FG V LK D++ ++ + R + E V+ K + L
Sbjct: 82 IGRGAFGEVAVVKLKNADKVFAMKILNKWEMLKRAETACFREERDVLVNGDSKWITTLHY 141
Query: 153 CCIDKDEKILIYEY----------------MPNKSLDFFLFDPTKRMLLDWSANYSSR-L 195
D + L+ +Y +P + F+L + + +Y R +
Sbjct: 142 AFQDDNNLYLVMDYYVGGDLLTLLSKFEDRLPEEMARFYLAEMVIAIDSVHQLHYVHRDI 201
Query: 196 KVSNILLDKDINPKISDFGMA-RICGGNELQANTSRIVGTYGYMSPEY-----AIQGIFS 249
K NIL+D + + +++DFG ++ +Q++ + VGT Y+SPE +G +
Sbjct: 202 KPDNILMDMNGHIRLADFGSCLKLMEDGTVQSSVA--VGTPDYISPEILQAMEGGKGRYG 259
Query: 250 IKSDVFSFGVLLLEIVSGKKTTGFY 274
+ D +S GV + E++ G+ T FY
Sbjct: 260 PECDWWSLGVCMYEMLYGE--TPFY 282
>pdb|4DYM|A Chain A, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With The Imidazo[1,2-B]pyridazine Inhibitor K00135
Length = 301
Score = 38.1 bits (87), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 50/227 (22%), Positives = 96/227 (42%), Gaps = 45/227 (19%)
Query: 86 TATNKFSDANKLGEGGFGPVYKGVLKKGDEIAVKRLPGRSGQG-LREMKNEASVIAKVQH 144
T ++ + +G+G +G V++G + G+ +AVK R + RE + +V+ ++H
Sbjct: 5 TVAHQITLLECVGKGRYGEVWRGSWQ-GENVAVKIFSSRDEKSWFRETELYNTVM--LRH 61
Query: 145 KNLVRL-------------LGCCIDKDEKILIYEYMPNKSLDFFLFDPTKRMLLDWSANY 191
+N++ L E +Y+Y+ +LD R++L ++
Sbjct: 62 ENILGFIASDMTSRHSSTQLWLITHYHEMGSLYDYLQLTTLDTV---SCLRIVLSIASGL 118
Query: 192 SS-----------------RLKVSNILLDKDINPKISDFGMARICGG--NELQANTSRIV 232
+ LK NIL+ K+ I+D G+A + N+L + V
Sbjct: 119 AHLHIEIFGTQGKPAIAHRDLKSKNILVKKNGQCCIADLGLAVMHSQSTNQLDVGNNPRV 178
Query: 233 GTYGYMSPEYAIQGI------FSIKSDVFSFGVLLLEIVSGKKTTGF 273
GT YM+PE + I + D+++FG++L E+ + G
Sbjct: 179 GTKRYMAPEVLDETIQVDCFDSYKRVDIWAFGLVLWEVARRMVSNGI 225
>pdb|4F99|A Chain A, Human Cdc7 Kinase In Complex With Dbf4 And Nucleotide
pdb|4F9A|A Chain A, Human Cdc7 Kinase In Complex With Dbf4 And Nucleotide
pdb|4F9A|C Chain C, Human Cdc7 Kinase In Complex With Dbf4 And Nucleotide
pdb|4F9B|A Chain A, Human Cdc7 Kinase In Complex With Dbf4 And Pha767491
pdb|4F9B|C Chain C, Human Cdc7 Kinase In Complex With Dbf4 And Pha767491
pdb|4F9C|A Chain A, Human Cdc7 Kinase In Complex With Dbf4 And Xl413
Length = 361
Score = 37.7 bits (86), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 70/284 (24%), Positives = 117/284 (41%), Gaps = 75/284 (26%)
Query: 70 KKEVDQLPLFSFSSVSTATNKFSDANKLGEGGFGPVYKGV--LKKGDE--IAVKRL---- 121
KK++++L + +V +N F +K+GEG F VY L+ G E IA+K L
Sbjct: 6 KKDIEKL----YEAVPQLSNVFKIEDKIGEGTFSSVYLATAQLQVGPEEKIALKHLIPTS 61
Query: 122 -PGRSGQGLREM-----------------KNEASVIAK--VQHKNLVRLLGCCIDKDEKI 161
P R L+ + KN+ VIA ++H++ + +L ++
Sbjct: 62 HPIRIAAELQCLTVAGGQDNVMGVKYCFRKNDHVVIAMPYLEHESFLDILNSLSFQE--- 118
Query: 162 LIYEYMPNKSLDFFLFDPTKRMLLDWSANYSSRLKVSNILLDKDINP-KISDFGMAR--- 217
+ EYM N LF KR + +K SN L ++ + + DFG+A+
Sbjct: 119 -VREYMLN------LFKALKR--IHQFGIVHRDVKPSNFLYNRRLKKYALVDFGLAQGTH 169
Query: 218 -----------------ICGGNELQANTSRI------VGTYGYMSPEYAIQGIFSIKS-D 253
C N+ SR GT G+ +PE + + D
Sbjct: 170 DTKIELLKFVQSEAQQERCSQNKCSICLSRRQQVAPRAGTPGFRAPEVLTKCPNQTTAID 229
Query: 254 VFSFGVLLLEIVSGKKTTGFYR-TDSLTLLGYAWDLWTSNRTLE 296
++S GV+ L ++SG+ FY+ +D LT L + S T++
Sbjct: 230 MWSAGVIFLSLLSGRYP--FYKASDDLTALAQIMTIRGSRETIQ 271
>pdb|3MTF|A Chain A, Crystal Structure Of The Acvr1 Kinase In Complex With A 2-
Aminopyridine Inhibitor
pdb|3MTF|B Chain B, Crystal Structure Of The Acvr1 Kinase In Complex With A 2-
Aminopyridine Inhibitor
pdb|3OOM|A Chain A, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With The Imidazo[1,2-B]pyridazine Inhibitor K00507
pdb|3Q4U|A Chain A, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
pdb|3Q4U|B Chain B, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
pdb|3Q4U|C Chain C, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
pdb|3Q4U|D Chain D, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
Length = 301
Score = 37.7 bits (86), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 49/216 (22%), Positives = 92/216 (42%), Gaps = 45/216 (20%)
Query: 97 LGEGGFGPVYKGVLKKGDEIAVKRLPGRSGQG-LREMKNEASVIAKVQHKNLVRL----- 150
+G+G +G V++G + G+ +AVK R + RE + +V+ ++H+N++
Sbjct: 16 VGKGRYGEVWRGSWQ-GENVAVKIFSSRDEKSWFRETELYNTVM--LRHENILGFIASDM 72
Query: 151 --------LGCCIDKDEKILIYEYMPNKSLDFFLFDPTKRMLLDWSANYSS--------- 193
L E +Y+Y+ +LD R++L ++ +
Sbjct: 73 TSRHSSTQLWLITHYHEMGSLYDYLQLTTLDTV---SCLRIVLSIASGLAHLHIEIFGTQ 129
Query: 194 --------RLKVSNILLDKDINPKISDFGMARICGG--NELQANTSRIVGTYGYMSPEYA 243
LK NIL+ K+ I+D G+A + N+L + VGT YM+PE
Sbjct: 130 GKPAIAHRDLKSKNILVKKNGQCCIADLGLAVMHSQSTNQLDVGNNPRVGTKRYMAPEVL 189
Query: 244 IQGI------FSIKSDVFSFGVLLLEIVSGKKTTGF 273
+ I + D+++FG++L E+ + G
Sbjct: 190 DETIQVDCFDSYKRVDIWAFGLVLWEVARRMVSNGI 225
>pdb|3H9R|A Chain A, Crystal Structure Of The Kinase Domain Of Type I Activin
Receptor (Acvr1) In Complex With Fkbp12 And Dorsomorphin
Length = 330
Score = 37.4 bits (85), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 49/216 (22%), Positives = 92/216 (42%), Gaps = 45/216 (20%)
Query: 97 LGEGGFGPVYKGVLKKGDEIAVKRLPGRSGQG-LREMKNEASVIAKVQHKNLVRL----- 150
+G+G +G V++G + G+ +AVK R + RE + +V+ ++H+N++
Sbjct: 45 VGKGRYGEVWRGSWQ-GENVAVKIFSSRDEKSWFRETELYNTVM--LRHENILGFIASDM 101
Query: 151 --------LGCCIDKDEKILIYEYMPNKSLDFFLFDPTKRMLLDWSANYSS--------- 193
L E +Y+Y+ +LD R++L ++ +
Sbjct: 102 TSRHSSTQLWLITHYHEMGSLYDYLQLTTLDTV---SCLRIVLSIASGLAHLHIEIFGTQ 158
Query: 194 --------RLKVSNILLDKDINPKISDFGMARICGG--NELQANTSRIVGTYGYMSPEYA 243
LK NIL+ K+ I+D G+A + N+L + VGT YM+PE
Sbjct: 159 GKPAIAHRDLKSKNILVKKNGQCCIADLGLAVMHSQSTNQLDVGNNPRVGTKRYMAPEVL 218
Query: 244 IQGI------FSIKSDVFSFGVLLLEIVSGKKTTGF 273
+ I + D+++FG++L E+ + G
Sbjct: 219 DETIQVDCFDSYKRVDIWAFGLVLWEVARRMVSNGI 254
>pdb|3LLT|A Chain A, Crystal Structure Of Pf14_0431, Kinase Domain
Length = 360
Score = 37.4 bits (85), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 53/237 (22%), Positives = 94/237 (39%), Gaps = 44/237 (18%)
Query: 74 DQLPLFSFSSVSTATNKFSDANKLGEGGFGPVYKGVLKKGDEIAVKRLPGRSGQGLREMK 133
D++ FS+ N F K+G+G FG V + ++ + R K
Sbjct: 20 DEIVHFSWKKGMLLNNAFLVIRKMGDGTFGRVLLCQHIDNKKYYAVKVVRNIKKYTRSAK 79
Query: 134 NEASVIAKVQHKNL-----VRLLGCCIDKDEKILI--------YEYMPNKSLDFFLFDPT 180
EA ++ K+Q+ ++ V+ G + D LI YE + + + F +
Sbjct: 80 IEADILKKIQNDDINNNNIVKYHGKFMYYDHMCLIFEPLGPSLYEIITRNNYNGFHIEDI 139
Query: 181 KRMLLDW--SANY-------SSRLKVSNILLDKDINPKISDFGMARICGGNELQANTSR- 230
K ++ + NY + LK NILLD K S + R+ G ++Q ++
Sbjct: 140 KLYCIEILKALNYLRKMSLTHTDLKPENILLDDPYFEK-SLITVRRVTDGKKIQIYRTKS 198
Query: 231 --------------------IVGTYGYMSPEYAIQGIFSIKSDVFSFGVLLLEIVSG 267
I+ T Y +PE + + + SD++SFG +L E+ +G
Sbjct: 199 TGIKLIDFGCATFKSDYHGSIINTRQYRAPEVILNLGWDVSSDMWSFGCVLAELYTG 255
>pdb|2QR8|A Chain A, 2.0a X-ray Structure Of C-terminal Kinase Domain Of P90
Ribosomal S6 Kinase 2 (rsk2)
pdb|4D9U|A Chain A, Rsk2 C-Terminal Kinase Domain, (E)-Tert-Butyl
3-(4-Amino-7-(3-
Hydroxypropyl)-5-P-Tolyl-7h-Pyrrolo[2,
3-D]pyrimidin-6-Yl)-2- Cyanoacrylate
pdb|4D9T|A Chain A, Rsk2 C-Terminal Kinase Domain With Inhibitor (E)-Methyl
3-(4-Amino-7-
(3-Hydroxypropyl)-5-P-Tolyl-7h-Pyrrolo[2,
3-D]pyrimidin-6-Yl)-2- Cyanoacrylate
Length = 342
Score = 36.6 bits (83), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 34/117 (29%), Positives = 58/117 (49%), Gaps = 13/117 (11%)
Query: 159 EKILIYEYMPNKSLDFFLFDPTKRMLLDWSANYSSR-LKVSNIL-LDKDINP---KISDF 213
+KIL ++ + LF TK + + R LK SNIL +D+ NP +I DF
Sbjct: 105 DKILRQKFFSEREASAVLFTITKTVEYLHAQGVVHRDLKPSNILYVDESGNPESIRICDF 164
Query: 214 GMARICGGNELQANTSRIVG---TYGYMSPEYAIQGIFSIKSDVFSFGVLLLEIVSG 267
G A+ +L+A ++ T +++PE + + D++S GVLL +++G
Sbjct: 165 GFAK-----QLRAENGLLMTPCYTANFVAPEVLERQGYDAACDIWSLGVLLYTMLTG 216
>pdb|1VZO|A Chain A, The Structure Of The N-Terminal Kinase Domain Of Msk1
Reveals A Novel Autoinhibitory Conformation For A Dual
Kinase Protein
Length = 355
Score = 36.6 bits (83), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 23/75 (30%), Positives = 41/75 (54%), Gaps = 3/75 (4%)
Query: 195 LKVSNILLDKDINPKISDFGMARICGGNELQANTSRIVGTYGYMSPEYAIQGI--FSIKS 252
+K+ NILLD + + ++DFG+++ +E + GT YM+P+ G
Sbjct: 185 IKLENILLDSNGHVVLTDFGLSKEFVADETE-RAYDFCGTIEYMAPDIVRGGDSGHDKAV 243
Query: 253 DVFSFGVLLLEIVSG 267
D +S GVL+ E+++G
Sbjct: 244 DWWSLGVLMYELLTG 258
>pdb|1ZYC|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|C Chain C, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|D Chain D, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYD|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type Complexed With Atp.
pdb|1ZYD|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type Complexed With Atp
Length = 303
Score = 36.2 bits (82), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 51/238 (21%), Positives = 94/238 (39%), Gaps = 50/238 (21%)
Query: 91 FSDANKLGEGGFGPVYKGVLKKGDEIAVKRLPGRSGQGLREMKNEASVIAKVQHKNLVRL 150
F + LG+G FG V K + + + L + +E ++A + H+ +VR
Sbjct: 8 FEEIAVLGQGAFGQVVKARNALDSRYYAIKKIRHTEEKLSTILSEVMLLASLNHQYVVRY 67
Query: 151 LGCCID-------------KDEKILIYEYMPNKSLDFFLFDPTK-----------RMLLD 186
++ K + EY N++L + R +L+
Sbjct: 68 YAAWLERRNFVKPMTAVKKKSTLFIQMEYCENRTLYDLIHSENLNQQRDEYWRLFRQILE 127
Query: 187 WSANYSSR------LKVSNILLDKDINPKISDFGMAR---------------ICGGNELQ 225
+ S+ LK NI +D+ N KI DFG+A+ + G ++
Sbjct: 128 ALSYIHSQGIIHRDLKPMNIFIDESRNVKIGDFGLAKNVHRSLDILKLDSQNLPGSSD-- 185
Query: 226 ANTSRIVGTYGYMSPEYAI-QGIFSIKSDVFSFGVLLLEIVSGKKTTGFYRTDSLTLL 282
N + +GT Y++ E G ++ K D++S G++ E++ +TG R + L L
Sbjct: 186 -NLTSAIGTAMYVATEVLDGTGHYNEKIDMYSLGIIFFEMIY-PFSTGMERVNILKKL 241
>pdb|3LM0|A Chain A, Crystal Structure Of Human SerineTHREONINE KINASE 17B
(STK17B)
pdb|3LM5|A Chain A, Crystal Structure Of Human SerineTHREONINE KINASE 17B
(STK17B) IN Complex With Quercetin
Length = 327
Score = 35.8 bits (81), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 55/194 (28%), Positives = 82/194 (42%), Gaps = 32/194 (16%)
Query: 94 ANKLGEGGFGPVYKGVLKK-GDEIAVKRLPGRS-GQGLR-EMKNEASVIAKVQH-KNLVR 149
+ +LG G F V + + K G E A K L R GQ R E+ +E +V+ + ++
Sbjct: 34 SKELGRGKFAVVRQCISKSTGQEYAAKFLKKRRRGQDCRAEILHEIAVLELAKSCPRVIN 93
Query: 150 LLGCCIDKDEKILIYEYMPNKSLDFFLFDP--------------TKRML-----LDWSAN 190
L + E ILI EY + F L P K++L L +
Sbjct: 94 LHEVYENTSEIILILEYAAGGEI-FSLCLPELAEMVSENDVIRLIKQILEGVYYLHQNNI 152
Query: 191 YSSRLKVSNILLDKDINP----KISDFGMARICGGNELQANTSRIVGTYGYMSPEYAIQG 246
LK NILL I P KI DFGM+R G I+GT Y++PE
Sbjct: 153 VHLDLKPQNILLSS-IYPLGDIKIVDFGMSRKIGH---ACELREIMGTPEYLAPEILNYD 208
Query: 247 IFSIKSDVFSFGVL 260
+ +D+++ G++
Sbjct: 209 PITTATDMWNIGII 222
>pdb|2H34|A Chain A, Apoenzyme Crystal Structure Of The Tuberculosis
SerineTHREONINE Kinase, Pkne
pdb|2H34|B Chain B, Apoenzyme Crystal Structure Of The Tuberculosis
SerineTHREONINE Kinase, Pkne
Length = 309
Score = 35.8 bits (81), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 24/89 (26%), Positives = 43/89 (48%), Gaps = 4/89 (4%)
Query: 195 LKVSNILLDKDINPKISDFGMARICGGNELQANTSRIVGTYGYMSPEYAIQGIFSIKSDV 254
+K NIL+ D + DFG+A +L VGT Y +PE + + ++D+
Sbjct: 160 VKPENILVSADDFAYLVDFGIASATTDEKL-TQLGNTVGTLYYXAPERFSESHATYRADI 218
Query: 255 FSFGVLLLEIVSGKKTTGFYRTDSLTLLG 283
++ +L E ++G Y+ D L++ G
Sbjct: 219 YALTCVLYECLTGSPP---YQGDQLSVXG 244
>pdb|3QFV|A Chain A, Mrck Beta In Complex With Tpca-1
pdb|3QFV|B Chain B, Mrck Beta In Complex With Tpca-1
Length = 415
Score = 35.8 bits (81), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 29/91 (31%), Positives = 51/91 (56%), Gaps = 9/91 (9%)
Query: 190 NYSSR-LKVSNILLDKDINPKISDFGMARICGGNELQANTSRIVGTYGYMSPEY--AIQ- 245
+Y R +K N+LLD + + +++DFG + ++ +S VGT Y+SPE A++
Sbjct: 195 HYVHRDIKPDNVLLDVNGHIRLADFGSC-LKMNDDGTVQSSVAVGTPDYISPEILQAMED 253
Query: 246 --GIFSIKSDVFSFGVLLLEIVSGKKTTGFY 274
G + + D +S GV + E++ G+ T FY
Sbjct: 254 GMGKYGPECDWWSLGVCMYEMLYGE--TPFY 282
>pdb|3TKU|A Chain A, Mrck Beta In Complex With Fasudil
pdb|3TKU|B Chain B, Mrck Beta In Complex With Fasudil
Length = 433
Score = 35.8 bits (81), Expect = 0.042, Method: Compositional matrix adjust.
Identities = 29/91 (31%), Positives = 51/91 (56%), Gaps = 9/91 (9%)
Query: 190 NYSSR-LKVSNILLDKDINPKISDFGMARICGGNELQANTSRIVGTYGYMSPEY--AIQ- 245
+Y R +K N+LLD + + +++DFG + ++ +S VGT Y+SPE A++
Sbjct: 211 HYVHRDIKPDNVLLDVNGHIRLADFGSC-LKMNDDGTVQSSVAVGTPDYISPEILQAMED 269
Query: 246 --GIFSIKSDVFSFGVLLLEIVSGKKTTGFY 274
G + + D +S GV + E++ G+ T FY
Sbjct: 270 GMGKYGPECDWWSLGVCMYEMLYGE--TPFY 298
>pdb|2QR7|A Chain A, 2.0a X-Ray Structure Of C-Terminal Kinase Domain Of P90
Ribosomal S6 Kinase 2: Se-Met Derivative
Length = 342
Score = 35.4 bits (80), Expect = 0.057, Method: Compositional matrix adjust.
Identities = 34/117 (29%), Positives = 56/117 (47%), Gaps = 13/117 (11%)
Query: 159 EKILIYEYMPNKSLDFFLFDPTKRMLLDWSANYSSR-LKVSNIL-LDKDINP---KISDF 213
+KIL ++ + LF TK + + R LK SNIL +D+ NP +I DF
Sbjct: 105 DKILRQKFFSEREASAVLFTITKTVEYLHAQGVVHRDLKPSNILYVDESGNPESIRICDF 164
Query: 214 GMARICGGNELQANTSRIVG---TYGYMSPEYAIQGIFSIKSDVFSFGVLLLEIVSG 267
G A+ +L+A + T +++PE + + D++S GVLL ++G
Sbjct: 165 GFAK-----QLRAENGLLXTPCYTANFVAPEVLERQGYDAACDIWSLGVLLYTXLTG 216
>pdb|1ZXE|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|C Chain C, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|D Chain D, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|E Chain E, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|F Chain F, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
Length = 303
Score = 35.4 bits (80), Expect = 0.058, Method: Compositional matrix adjust.
Identities = 46/221 (20%), Positives = 85/221 (38%), Gaps = 49/221 (22%)
Query: 91 FSDANKLGEGGFGPVYKGVLKKGDEIAVKRLPGRSGQGLREMKNEASVIAKVQHKNLVRL 150
F + LG+G FG V K + + + L + +E ++A + H+ +VR
Sbjct: 8 FEEIAVLGQGAFGQVVKARNALDSRYYAIKKIRHTEEKLSTILSEVXLLASLNHQYVVRY 67
Query: 151 LGCCID-------------KDEKILIYEYMPNKSLDFFLFDPTK-----------RMLLD 186
++ K + EY N++L + R +L+
Sbjct: 68 YAAWLERRNFVKPXTAVKKKSTLFIQXEYCENRTLYDLIHSENLNQQRDEYWRLFRQILE 127
Query: 187 WSANYSSR------LKVSNILLDKDINPKISDFGMAR---------------ICGGNELQ 225
+ S+ LK NI +D+ N KI DFG+A+ + G ++
Sbjct: 128 ALSYIHSQGIIHRNLKPXNIFIDESRNVKIGDFGLAKNVHRSLDILKLDSQNLPGSSD-- 185
Query: 226 ANTSRIVGTYGYMSPEYAI-QGIFSIKSDVFSFGVLLLEIV 265
N + +GT Y++ E G ++ K D +S G++ E +
Sbjct: 186 -NLTSAIGTAXYVATEVLDGTGHYNEKIDXYSLGIIFFEXI 225
>pdb|3FPQ|A Chain A, Crystal Structure Of The Kinase Domain Of Wnk1
pdb|3FPQ|B Chain B, Crystal Structure Of The Kinase Domain Of Wnk1
Length = 290
Score = 35.4 bits (80), Expect = 0.061, Method: Compositional matrix adjust.
Identities = 49/204 (24%), Positives = 81/204 (39%), Gaps = 41/204 (20%)
Query: 96 KLGEGGFGPVYKGV-LKKGDEIAVKRLPGR--SGQGLREMKNEASVIAKVQHKNLVRLLG 152
++G G F VYKG+ + E+A L R + + K EA + +QH N+VR
Sbjct: 33 EIGRGSFKTVYKGLDTETTVEVAWCELQDRKLTKSERQRFKEEAEXLKGLQHPNIVRFYD 92
Query: 153 C---------CIDKDEKILIYEYMPNKSLDFFL--FDPTK-RMLLDWSAN---------- 190
CI +L+ E + +L +L F K ++L W
Sbjct: 93 SWESTVKGKKCI-----VLVTELXTSGTLKTYLKRFKVXKIKVLRSWCRQILKGLQFLHT 147
Query: 191 -----YSSRLKVSNILLDKDINP-KISDFGMARICGGNELQANTSRIVGTYGYMSPEYAI 244
LK NI + KI D G+A + + +A ++GT + +PE
Sbjct: 148 RTPPIIHRDLKCDNIFITGPTGSVKIGDLGLATLKRASFAKA----VIGTPEFXAPE-XY 202
Query: 245 QGIFSIKSDVFSFGVLLLEIVSGK 268
+ + DV++FG LE + +
Sbjct: 203 EEKYDESVDVYAFGXCXLEXATSE 226
>pdb|1ZY4|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant In Apo Form.
pdb|1ZY4|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant In Apo Form.
pdb|1ZY5|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant Complexed With Amppnp.
pdb|1ZY5|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant Complexed With Amppnp
Length = 303
Score = 35.0 bits (79), Expect = 0.076, Method: Compositional matrix adjust.
Identities = 51/238 (21%), Positives = 94/238 (39%), Gaps = 50/238 (21%)
Query: 91 FSDANKLGEGGFGPVYKGVLKKGDEIAVKRLPGRSGQGLREMKNEASVIAKVQHKNLVRL 150
F + LG+G FG V K + + + L + +E ++A + H+ +VR
Sbjct: 8 FEEIAVLGQGAFGQVVKARNALDSRYYAIKKIRHTEEKLSTILSEVMLLASLNHQYVVRY 67
Query: 151 LGCCIDKDEKILIYEYMPNKSLDFF---------LFDPTK---------------RMLLD 186
+++ + + KS F L+D R +L+
Sbjct: 68 YAAWLERRNFVKPMTAVKKKSTLFIQMEYCENGTLYDLIHSENLNQQRDEYWRLFRQILE 127
Query: 187 WSANYSSR------LKVSNILLDKDINPKISDFGMAR---------------ICGGNELQ 225
+ S+ LK NI +D+ N KI DFG+A+ + G ++
Sbjct: 128 ALSYIHSQGIIHRDLKPMNIFIDESRNVKIGDFGLAKNVHRSLDILKLDSQNLPGSSD-- 185
Query: 226 ANTSRIVGTYGYMSPEYAI-QGIFSIKSDVFSFGVLLLEIVSGKKTTGFYRTDSLTLL 282
N + +GT Y++ E G ++ K D++S G++ E++ +TG R + L L
Sbjct: 186 -NLTSAIGTAMYVATEVLDGTGHYNEKIDMYSLGIIFFEMIY-PFSTGMERVNILKKL 241
>pdb|3RNY|A Chain A, Crystal Structure Of Human Rsk1 C-Terminal Kinase Domain
pdb|3RNY|B Chain B, Crystal Structure Of Human Rsk1 C-Terminal Kinase Domain
Length = 346
Score = 35.0 bits (79), Expect = 0.078, Method: Compositional matrix adjust.
Identities = 33/117 (28%), Positives = 57/117 (48%), Gaps = 13/117 (11%)
Query: 159 EKILIYEYMPNKSLDFFLFDPTKRMLLDWSANYSSR-LKVSNIL-LDKDINP---KISDF 213
+KIL ++ + F L K + S R LK SNIL +D+ NP +I DF
Sbjct: 110 DKILRQKFFSEREASFVLHTIGKTVEYLHSQGVVHRDLKPSNILYVDESGNPECLRICDF 169
Query: 214 GMARICGGNELQANTSRIVG---TYGYMSPEYAIQGIFSIKSDVFSFGVLLLEIVSG 267
G A+ +L+A ++ T +++PE + + D++S G+LL +++G
Sbjct: 170 GFAK-----QLRAENGLLMTPCYTANFVAPEVLKRQGYDEGCDIWSLGILLYTMLAG 221
>pdb|2WNT|A Chain A, Crystal Structure Of The Human Ribosomal Protein S6 Kinase
pdb|2WNT|B Chain B, Crystal Structure Of The Human Ribosomal Protein S6 Kinase
Length = 330
Score = 34.7 bits (78), Expect = 0.092, Method: Compositional matrix adjust.
Identities = 33/117 (28%), Positives = 57/117 (48%), Gaps = 13/117 (11%)
Query: 159 EKILIYEYMPNKSLDFFLFDPTKRMLLDWSANYSSR-LKVSNIL-LDKDINP---KISDF 213
+KIL ++ + F L K + S R LK SNIL +D+ NP +I DF
Sbjct: 110 DKILRQKFFSEREASFVLHTIGKTVEYLHSQGVVHRDLKPSNILYVDESGNPECLRICDF 169
Query: 214 GMARICGGNELQANTSRIVG---TYGYMSPEYAIQGIFSIKSDVFSFGVLLLEIVSG 267
G A+ +L+A ++ T +++PE + + D++S G+LL +++G
Sbjct: 170 GFAK-----QLRAENGLLMTPCYTANFVAPEVLKRQGYDEGCDIWSLGILLYTMLAG 221
>pdb|2AC5|A Chain A, Structure Of Human Mnk2 Kinase Domain Mutant D228g
pdb|2HW7|A Chain A, Crystal Structure Of Mnk2-D228g In Complex With
Staurosporine
Length = 316
Score = 34.7 bits (78), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 58/227 (25%), Positives = 94/227 (41%), Gaps = 48/227 (21%)
Query: 83 SVSTATNKFSDANKL-----GEGGFGPVYKGV-LKKGDEIAVKRLPGRSGQGLREMKNEA 136
S + + +F D +L GEG V + L E AVK + + G + E
Sbjct: 2 STDSFSGRFEDVYQLQEDVLGEGAHARVQTCINLITSQEYAVKIIEKQPGHIRSRVFREV 61
Query: 137 SVIAKVQ-HKNLVRLLGCCIDKDEKILIYEYMPNKSLDFFLFDPTKRM------------ 183
++ + Q H+N++ L+ ++D L++E M S+ L KR
Sbjct: 62 EMLYQCQGHRNVLELIEFFEEEDRFYLVFEKMRGGSI---LSHIHKRRHFNELEASVVVQ 118
Query: 184 ----LLDWSAN---YSSRLKVSNILLDK--DINP-KISDFGMARICGGNELQANTSRI-- 231
LD+ N LK NIL + ++P KI DFG+ G +L + S I
Sbjct: 119 DVASALDFLHNKGIAHRDLKPENILCEHPNQVSPVKICDFGLG---SGIKLNGDCSPIST 175
Query: 232 ------VGTYGYMSPEYAIQ-----GIFSIKSDVFSFGVLLLEIVSG 267
G+ YM+PE I+ + D++S GV+L ++SG
Sbjct: 176 PELLTPCGSAEYMAPEVVEAFSEEASIYDKRCDLWSLGVILYILLSG 222
>pdb|3ENM|A Chain A, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|B Chain B, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|C Chain C, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|D Chain D, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
Length = 316
Score = 34.3 bits (77), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 36/154 (23%), Positives = 72/154 (46%), Gaps = 37/154 (24%)
Query: 195 LKVSNILLDKDINPKISDFGMARICGGNELQANTSRIV--GTYGYMSPEYAI----QGIF 248
+K SN+L++ K DFG++ L + ++ + G Y +PE Q +
Sbjct: 163 VKPSNVLINALGQVKXCDFGIS-----GYLVDDVAKDIDAGCKPYXAPERINPELNQKGY 217
Query: 249 SIKSDVFSFGVLLLEIVSGKKTTGFYRTDSLTLLGYAWDLWTS-----NRTLELIDPIL- 302
S+KSD++S G+ +E L +L + +D W + + +E P L
Sbjct: 218 SVKSDIWSLGITXIE---------------LAILRFPYDSWGTPFQQLKQVVEEPSPQLP 262
Query: 303 EDEYSSKHMLLRYVNIALLCVQESADDRPTMNEV 336
D++S++ +V+ C+++++ +RPT E+
Sbjct: 263 ADKFSAE-----FVDFTSQCLKKNSKERPTYPEL 291
>pdb|2W4O|A Chain A, Crystal Structure Of Human Camk4 In Complex With 4-Amino(
Sulfamoyl-Phenylamino)-Triazole-Carbothioic Acid (2,6-
Difluoro-Phenyl)-Amide)
Length = 349
Score = 34.3 bits (77), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 18/59 (30%), Positives = 32/59 (54%), Gaps = 3/59 (5%)
Query: 209 KISDFGMARICGGNELQANTSRIVGTYGYMSPEYAIQGIFSIKSDVFSFGVLLLEIVSG 267
KI+DFG+++I E Q + GT GY +PE + + D++S G++ ++ G
Sbjct: 191 KIADFGLSKIV---EHQVLMKTVCGTPGYCAPEILRGCAYGPEVDMWSVGIITYILLCG 246
>pdb|3RP9|A Chain A, Crystal Structure Of The Apo Mapk From Toxoplasma Gondii,
25.M01780 Or Tgme49_007820
Length = 458
Score = 33.9 bits (76), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 57/269 (21%), Positives = 110/269 (40%), Gaps = 54/269 (20%)
Query: 62 SKQTKRSKKKEVDQLPLFSFSSVST---ATNKFSDANKLGEGGFGPVYKGVLK-KGDEIA 117
S+Q + +K+ P S + +++ + +G G +G V + K + +A
Sbjct: 23 SQQEGQQRKQHHSSKPTASMPRPHSDWQIPDRYEIRHLIGTGSYGHVCEAYDKLEKRVVA 82
Query: 118 VKRLPGRSGQGLREMKN---EASVIAKVQHKNLVRLLGCCIDKD-----EKILIYE---- 165
+K++ R + L + K E +++ ++ H ++V++L I KD E ++ E
Sbjct: 83 IKKI-LRVFEDLIDCKRILREIAILNRLNHDHVVKVLDIVIPKDVEKFDELYVVLEIADS 141
Query: 166 ----------YMPNKSLDFFLFDPTKRMLLDWSANYSSR-LKVSNILLDKDINPKISDFG 214
Y+ + L++ + SA R LK +N L+++D + K+ DFG
Sbjct: 142 DFKKLFRTPVYLTELHIKTLLYNLLVGVKYVHSAGILHRDLKPANCLVNQDCSVKVCDFG 201
Query: 215 MARIC----GGN---------------------ELQANTSRIVGTYGYMSPEYA-IQGIF 248
+AR GN L+ + V T Y +PE +Q +
Sbjct: 202 LARTVDYPENGNSQLPISPREDDMNLVTFPHTKNLKRQLTGHVVTRWYRAPELILLQENY 261
Query: 249 SIKSDVFSFGVLLLEIVSGKKTTGFYRTD 277
+ DV+S G + E+++ K Y D
Sbjct: 262 TEAIDVWSIGCIFAELLNMIKENVAYHAD 290
>pdb|2Z2W|A Chain A, Humand Wee1 Kinase Complexed With Inhibitor Pf0335770
Length = 285
Score = 33.9 bits (76), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 30/95 (31%), Positives = 44/95 (46%), Gaps = 10/95 (10%)
Query: 85 STATNKFSDANKLGEGGFGPVYKGVLK-KGDEIAVKR----LPGRSGQ--GLREMKNEAS 137
S T +F + K+G G FG V+K V + G A+KR L G + LRE+ A
Sbjct: 3 SRYTTEFHELEKIGSGEFGSVFKCVKRLDGCIYAIKRSKKPLAGSVDEQNALREVYAHAV 62
Query: 138 VIAKVQHKNLVRLLGCCIDKDEKILIYEYMPNKSL 172
+ QH ++VR + D ++ EY SL
Sbjct: 63 L---GQHSHVVRYFSAWAEDDHMLIQNEYCNGGSL 94
>pdb|2IN6|A Chain A, Wee1 Kinase Complex With Inhibitor Pd311839
pdb|2IO6|A Chain A, Wee1 Kinase Complexed With Inhibitor Pd330961
Length = 287
Score = 33.9 bits (76), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 30/95 (31%), Positives = 44/95 (46%), Gaps = 10/95 (10%)
Query: 85 STATNKFSDANKLGEGGFGPVYKGVLK-KGDEIAVKR----LPGRSGQ--GLREMKNEAS 137
S T +F + K+G G FG V+K V + G A+KR L G + LRE+ A
Sbjct: 5 SRYTTEFHELEKIGSGEFGSVFKCVKRLDGCIYAIKRSKKPLAGSVDEQNALREVYAHAV 64
Query: 138 VIAKVQHKNLVRLLGCCIDKDEKILIYEYMPNKSL 172
+ QH ++VR + D ++ EY SL
Sbjct: 65 L---GQHSHVVRYFSAWAEDDHMLIQNEYCNGGSL 96
>pdb|3BI6|A Chain A, Wee1 Kinase Complex With Inhibitor Pd352396
pdb|3BIZ|A Chain A, Wee1 Kinase Complex With Inhibitor Pd331618
pdb|3CQE|A Chain A, Wee1 Kinase Complex With Inhibitor Pd074291
pdb|3CR0|A Chain A, Wee1 Kinase Complex With Inhibitor Pd259_809
Length = 287
Score = 33.9 bits (76), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 30/95 (31%), Positives = 44/95 (46%), Gaps = 10/95 (10%)
Query: 85 STATNKFSDANKLGEGGFGPVYKGVLK-KGDEIAVKR----LPGRSGQ--GLREMKNEAS 137
S T +F + K+G G FG V+K V + G A+KR L G + LRE+ A
Sbjct: 5 SRYTTEFHELEKIGSGEFGSVFKCVKRLDGCIYAIKRSKKPLAGSVDEQNALREVYAHAV 64
Query: 138 VIAKVQHKNLVRLLGCCIDKDEKILIYEYMPNKSL 172
+ QH ++VR + D ++ EY SL
Sbjct: 65 L---GQHSHVVRYFSAWAEDDHMLIQNEYCNGGSL 96
>pdb|4G3D|A Chain A, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|B Chain B, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|D Chain D, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|E Chain E, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
Length = 371
Score = 33.9 bits (76), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 32/128 (25%), Positives = 58/128 (45%), Gaps = 18/128 (14%)
Query: 154 CIDKDEKILIYEYMPNKSLDFFLFDPTKRMLLDWSANYSSRLKVSNILLDKD-INPKISD 212
C+ +D + Y ++L+ + ++R+L +K N+LL D + + D
Sbjct: 181 CLPEDRAL----YYLGQALEGLEYLHSRRIL-------HGDVKADNVLLSSDGSHAALCD 229
Query: 213 FGMARIC----GGNELQANTSRIVGTYGYMSPEYAIQGIFSIKSDVFSFGVLLLEIVSG- 267
FG A +C G + I GT +M+PE + K DV+S ++L +++G
Sbjct: 230 FGHA-VCLQPDGLGKSLLTGDYIPGTETHMAPEVVLGRSCDAKVDVWSSCCMMLHMLNGC 288
Query: 268 KKTTGFYR 275
T F+R
Sbjct: 289 HPWTQFFR 296
>pdb|1X8B|A Chain A, Structure Of Human Wee1a Kinase: Kinase Domain Complexed
With Inhibitor Pd0407824
Length = 289
Score = 33.9 bits (76), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 30/95 (31%), Positives = 44/95 (46%), Gaps = 10/95 (10%)
Query: 85 STATNKFSDANKLGEGGFGPVYKGVLK-KGDEIAVKR----LPGRSGQ--GLREMKNEAS 137
S T +F + K+G G FG V+K V + G A+KR L G + LRE+ A
Sbjct: 7 SRYTTEFHELEKIGSGEFGSVFKCVKRLDGCIYAIKRSKKPLAGSVDEQNALREVYAHAV 66
Query: 138 VIAKVQHKNLVRLLGCCIDKDEKILIYEYMPNKSL 172
+ QH ++VR + D ++ EY SL
Sbjct: 67 L---GQHSHVVRYFSAWAEDDHMLIQNEYCNGGSL 98
>pdb|1Z57|A Chain A, Crystal Structure Of Human Clk1 In Complex With
10z-Hymenialdisine
Length = 339
Score = 33.5 bits (75), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 54/225 (24%), Positives = 85/225 (37%), Gaps = 56/225 (24%)
Query: 90 KFSDANKLGEGGFGPVYKGVLKK--GDEIAVKRLPGRSGQGLREMKNEASVIAKVQHKN- 146
++ + LGEG FG V + + K G +AVK + R + S I ++H N
Sbjct: 15 RYEIVDTLGEGAFGKVVECIDHKAGGRHVAVKIVKNVD----RYCEAARSEIQVLEHLNT 70
Query: 147 --------LVRLLGCCIDKDEKILIYEYMPNKSLDF--------FLFDPTKRMLLDW--S 188
V++L +++E + + DF F D ++M S
Sbjct: 71 TDPNSTFRCVQMLEWFEHHGHICIVFELLGLSTYDFIKENGFLPFRLDHIRKMAYQICKS 130
Query: 189 ANY-------SSRLKVSNILLDKD-----------------INP--KISDFGMARICGGN 222
N+ + LK NIL + INP K+ DFG A
Sbjct: 131 VNFLHSNKLTHTDLKPENILFVQSDYTEAYNPKIKRDERTLINPDIKVVDFGSA-----T 185
Query: 223 ELQANTSRIVGTYGYMSPEYAIQGIFSIKSDVFSFGVLLLEIVSG 267
+ S +V T Y +PE + +S DV+S G +L+E G
Sbjct: 186 YDDEHHSTLVSTRHYRAPEVILALGWSQPCDVWSIGCILIEYYLG 230
>pdb|3R00|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3R01|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3R02|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3R04|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3VBQ|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBT|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBV|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBW|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBX|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBY|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VC4|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
Length = 299
Score = 33.5 bits (75), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 54/201 (26%), Positives = 81/201 (40%), Gaps = 36/201 (17%)
Query: 97 LGEGGFGPVYKGV-LKKGDEIAVKRLPGRSGQGLREMKN------EASVIAKVQ--HKNL 147
LG GGFG VY G+ + +A+K + E+ N E ++ KV +
Sbjct: 17 LGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGV 76
Query: 148 VRLLGCCIDKDEKILIYEYMPNKSLDFFLFDPTKRMLLD-------WSANYSSR------ 194
+RLL D +LI E P D F F + L + W + R
Sbjct: 77 IRLLDWFERPDSFVLILE-RPEPVQDLFDFITERGALQEELARSFFWQVLEAVRHCHNCG 135
Query: 195 -----LKVSNILLDKDINP-KISDFGMARICGGNELQANT-SRIVGTYGYMSPEYAIQGI 247
+K NIL+D + K+ DFG G L+ + GT Y PE+
Sbjct: 136 VLHRDIKDENILIDLNRGELKLIDFG-----SGALLKDTVYTDFDGTRVYSPPEWIRYHR 190
Query: 248 FSIKS-DVFSFGVLLLEIVSG 267
+ +S V+S G+LL ++V G
Sbjct: 191 YHGRSAAVWSLGILLYDMVCG 211
>pdb|1XQZ|A Chain A, Crystal Structure Of Hpim-1 Kinase At 2.1 A Resolution
pdb|1XR1|A Chain A, Crystal Structure Of Hpim-1 Kinase In Complex With Amp-Pnp
At 2.1 A Resolution
Length = 300
Score = 33.1 bits (74), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 54/201 (26%), Positives = 81/201 (40%), Gaps = 36/201 (17%)
Query: 97 LGEGGFGPVYKGV-LKKGDEIAVKRLPGRSGQGLREMKN------EASVIAKVQ--HKNL 147
LG GGFG VY G+ + +A+K + E+ N E ++ KV +
Sbjct: 31 LGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGV 90
Query: 148 VRLLGCCIDKDEKILIYEYMPNKSLDFFLFDPTKRMLLD-------WSANYSSR------ 194
+RLL D +LI E P D F F + L + W + R
Sbjct: 91 IRLLDWFERPDSFVLILE-RPEPVQDLFDFITERGALQEELARSFFWQVLEAVRHCHNCG 149
Query: 195 -----LKVSNILLDKDINP-KISDFGMARICGGNELQANT-SRIVGTYGYMSPEYAIQGI 247
+K NIL+D + K+ DFG G L+ + GT Y PE+
Sbjct: 150 VLHRDIKDENILIDLNRGELKLIDFG-----SGALLKDTVYTDFDGTRVYSPPEWIRYHR 204
Query: 248 FSIKS-DVFSFGVLLLEIVSG 267
+ +S V+S G+LL ++V G
Sbjct: 205 YHGRSAAVWSLGILLYDMVCG 225
>pdb|4DN5|A Chain A, Crystal Structure Of Nf-kb-inducing Kinase (nik)
pdb|4DN5|B Chain B, Crystal Structure Of Nf-kb-inducing Kinase (nik)
Length = 356
Score = 33.1 bits (74), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 33/130 (25%), Positives = 60/130 (46%), Gaps = 22/130 (16%)
Query: 154 CIDKDEKILIYEYMPNKSLDFFLFDPTKRMLLDWSANYSSRLKVSNILLDKD-INPKISD 212
C+ +D + Y ++L+ + ++R+L +K N+LL D + + D
Sbjct: 162 CLPEDRAL----YYLGQALEGLEYLHSRRIL-------HGDVKADNVLLSSDGSHAALCD 210
Query: 213 FGMARIC------GGNELQANTSRIVGTYGYMSPEYAIQGIFSIKSDVFSFGVLLLEIVS 266
FG A +C G + L + I GT +M+PE + K DV+S ++L +++
Sbjct: 211 FGHA-VCLQPDGLGKDLLTGDY--IPGTETHMAPEVVLGRSCDAKVDVWSSCCMMLHMLN 267
Query: 267 G-KKTTGFYR 275
G T F+R
Sbjct: 268 GCHPWTQFFR 277
>pdb|3DCV|A Chain A, Crystal Structure Of Human Pim1 Kinase Complexed With
4-(4-
Hydroxy-3-Methyl-Phenyl)-6-Phenylpyrimidin-2(1h)-One
pdb|3T9I|A Chain A, Pim1 Complexed With A Novel 3,6-Disubstituted Indole At
2.6 Ang Resolution
Length = 328
Score = 33.1 bits (74), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 54/201 (26%), Positives = 81/201 (40%), Gaps = 36/201 (17%)
Query: 97 LGEGGFGPVYKGV-LKKGDEIAVKRLPGRSGQGLREMKN------EASVIAKVQ--HKNL 147
LG GGFG VY G+ + +A+K + E+ N E ++ KV +
Sbjct: 59 LGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGV 118
Query: 148 VRLLGCCIDKDEKILIYEYMPNKSLDFFLFDPTKRMLLD-------WSANYSSR------ 194
+RLL D +LI E P D F F + L + W + R
Sbjct: 119 IRLLDWFERPDSFVLILE-RPEPVQDLFDFITERGALQEELARSFFWQVLEAVRHCHNCG 177
Query: 195 -----LKVSNILLDKDINP-KISDFGMARICGGNELQANT-SRIVGTYGYMSPEYAIQGI 247
+K NIL+D + K+ DFG G L+ + GT Y PE+
Sbjct: 178 VLHRDIKDENILIDLNRGELKLIDFG-----SGALLKDTVYTDFDGTRVYSPPEWIRYHR 232
Query: 248 FSIKS-DVFSFGVLLLEIVSG 267
+ +S V+S G+LL ++V G
Sbjct: 233 YHGRSAAVWSLGILLYDMVCG 253
>pdb|1XWS|A Chain A, Crystal Structure Of The Human Pim1 Kinase Domain
Length = 313
Score = 33.1 bits (74), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 54/201 (26%), Positives = 81/201 (40%), Gaps = 36/201 (17%)
Query: 97 LGEGGFGPVYKGV-LKKGDEIAVKRLPGRSGQGLREMKN------EASVIAKVQ--HKNL 147
LG GGFG VY G+ + +A+K + E+ N E ++ KV +
Sbjct: 44 LGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGV 103
Query: 148 VRLLGCCIDKDEKILIYEYMPNKSLDFFLFDPTKRMLLD-------WSANYSSR------ 194
+RLL D +LI E P D F F + L + W + R
Sbjct: 104 IRLLDWFERPDSFVLILE-RPEPVQDLFDFITERGALQEELARSFFWQVLEAVRHCHNCG 162
Query: 195 -----LKVSNILLDKDINP-KISDFGMARICGGNELQANT-SRIVGTYGYMSPEYAIQGI 247
+K NIL+D + K+ DFG G L+ + GT Y PE+
Sbjct: 163 VLHRDIKDENILIDLNRGELKLIDFG-----SGALLKDTVYTDFDGTRVYSPPEWIRYHR 217
Query: 248 FSIKS-DVFSFGVLLLEIVSG 267
+ +S V+S G+LL ++V G
Sbjct: 218 YHGRSAAVWSLGILLYDMVCG 238
>pdb|3N9X|A Chain A, Crystal Structure Of Map Kinase From Plasmodium Berghei,
Pb000659.00.0
pdb|3N9X|B Chain B, Crystal Structure Of Map Kinase From Plasmodium Berghei,
Pb000659.00.0
Length = 432
Score = 33.1 bits (74), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 50/216 (23%), Positives = 94/216 (43%), Gaps = 48/216 (22%)
Query: 97 LGEGGFGPVYKGVLKKGDE-IAVKRLPGRSGQGLREMKN---EASVIAKVQHKNLVRLLG 152
+G G +G VY K ++ +A+K++ R + L + K E +++ +++ ++RL
Sbjct: 34 IGRGSYGYVYLAYDKNTEKNVAIKKV-NRMFEDLIDCKRILREITILNRLKSDYIIRLYD 92
Query: 153 CCIDKD-----EKILIYEYMPN------KSLDFFLFDPTKRMLLDW---------SANYS 192
I D E ++ E + K+ F + K +L + S
Sbjct: 93 LIIPDDLLKFDELYIVLEIADSDLKKLFKTPIFLTEEHIKTILYNLLLGENFIHESGIIH 152
Query: 193 SRLKVSNILLDKDINPKISDFGMARICGG-------NELQAN--------------TSRI 231
LK +N LL++D + K+ DFG+AR N+L+ N TS +
Sbjct: 153 RDLKPANCLLNQDCSVKVCDFGLARTINSEKDTNIVNDLEENEEPGPHNKNLKKQLTSHV 212
Query: 232 VGTYGYMSPEYA-IQGIFSIKSDVFSFGVLLLEIVS 266
V T Y +PE +Q ++ D++S G + E+++
Sbjct: 213 V-TRWYRAPELILLQENYTKSIDIWSTGCIFAELLN 247
>pdb|3C4E|A Chain A, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
pdb|3C4E|B Chain B, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
pdb|3C4E|C Chain C, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
pdb|3C4E|D Chain D, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
Length = 273
Score = 33.1 bits (74), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 54/201 (26%), Positives = 81/201 (40%), Gaps = 36/201 (17%)
Query: 97 LGEGGFGPVYKGV-LKKGDEIAVKRLPGRSGQGLREMKN------EASVIAKVQ--HKNL 147
LG GGFG VY G+ + +A+K + E+ N E ++ KV +
Sbjct: 12 LGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGV 71
Query: 148 VRLLGCCIDKDEKILIYEYMPNKSLDFFLFDPTKRMLLD-------WSANYSSR------ 194
+RLL D +LI E P D F F + L + W + R
Sbjct: 72 IRLLDWFERPDSFVLILE-RPEPVQDLFDFITERGALQEELARSFFWQVLEAVRHCHNCG 130
Query: 195 -----LKVSNILLDKDINP-KISDFGMARICGGNELQANT-SRIVGTYGYMSPEYAIQGI 247
+K NIL+D + K+ DFG G L+ + GT Y PE+
Sbjct: 131 VLHRDIKDENILIDLNRGELKLIDFG-----SGALLKDTVYTDFDGTRVYSPPEWIRYHR 185
Query: 248 FSIKS-DVFSFGVLLLEIVSG 267
+ +S V+S G+LL ++V G
Sbjct: 186 YHGRSAAVWSLGILLYDMVCG 206
>pdb|3JPV|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Pyrrolo[2,3- A]carbazole Ligand
pdb|3QF9|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Furan- Thiazolidinedione Ligand
pdb|4GW8|A Chain A, Human Proto-Oncogene Serine Threonine Kinase (Pim1) In
Complex With A Consensus Peptide And Leucettine L41
Length = 313
Score = 33.1 bits (74), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 54/201 (26%), Positives = 81/201 (40%), Gaps = 36/201 (17%)
Query: 97 LGEGGFGPVYKGV-LKKGDEIAVKRLPGRSGQGLREMKN------EASVIAKVQ--HKNL 147
LG GGFG VY G+ + +A+K + E+ N E ++ KV +
Sbjct: 45 LGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGV 104
Query: 148 VRLLGCCIDKDEKILIYEYMPNKSLDFFLFDPTKRMLLD-------WSANYSSR------ 194
+RLL D +LI E P D F F + L + W + R
Sbjct: 105 IRLLDWFERPDSFVLILE-RPEPVQDLFDFITERGALQEELARSFFWQVLEAVRHCHNCG 163
Query: 195 -----LKVSNILLDKDINP-KISDFGMARICGGNELQANT-SRIVGTYGYMSPEYAIQGI 247
+K NIL+D + K+ DFG G L+ + GT Y PE+
Sbjct: 164 VLHRDIKDENILIDLNRGELKLIDFG-----SGALLKDTVYTDFDGTRVYSPPEWIRYHR 218
Query: 248 FSIKS-DVFSFGVLLLEIVSG 267
+ +S V+S G+LL ++V G
Sbjct: 219 YHGRSAAVWSLGILLYDMVCG 239
>pdb|3F2A|A Chain A, Crystal Structure Of Human Pim-1 In Complex With Dappa
Length = 300
Score = 33.1 bits (74), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 54/201 (26%), Positives = 81/201 (40%), Gaps = 36/201 (17%)
Query: 97 LGEGGFGPVYKGV-LKKGDEIAVKRLPGRSGQGLREMKN------EASVIAKVQ--HKNL 147
LG GGFG VY G+ + +A+K + E+ N E ++ KV +
Sbjct: 31 LGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGV 90
Query: 148 VRLLGCCIDKDEKILIYEYMPNKSLDFFLFDPTKRMLLD-------WSANYSSR------ 194
+RLL D +LI E P D F F + L + W + R
Sbjct: 91 IRLLDWFERPDSFVLILE-RPEPVQDLFDFITERGALQEELARSFFWQVLEAVRHCHNCG 149
Query: 195 -----LKVSNILLDKDINP-KISDFGMARICGGNELQANT-SRIVGTYGYMSPEYAIQGI 247
+K NIL+D + K+ DFG G L+ + GT Y PE+
Sbjct: 150 VLHRDIKDENILIDLNRGELKLIDFG-----SGALLKDTVYTDFDGTRVYSPPEWIRYHR 204
Query: 248 FSIKS-DVFSFGVLLLEIVSG 267
+ +S V+S G+LL ++V G
Sbjct: 205 YHGRSAAVWSLGILLYDMVCG 225
>pdb|2BIK|B Chain B, Human Pim1 Phosphorylated On Ser261
pdb|2BZI|B Chain B, Crystal Structure Of The Human Pim1 In Complex With A
Ruthenium Organometallic Ligand Ru2
Length = 313
Score = 33.1 bits (74), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 54/201 (26%), Positives = 81/201 (40%), Gaps = 36/201 (17%)
Query: 97 LGEGGFGPVYKGV-LKKGDEIAVKRLPGRSGQGLREMKN------EASVIAKVQ--HKNL 147
LG GGFG VY G+ + +A+K + E+ N E ++ KV +
Sbjct: 44 LGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGV 103
Query: 148 VRLLGCCIDKDEKILIYEYMPNKSLDFFLFDPTKRMLLD-------WSANYSSR------ 194
+RLL D +LI E P D F F + L + W + R
Sbjct: 104 IRLLDWFERPDSFVLILE-RPEPVQDLFDFITERGALQEELARSFFWQVLEAVRHCHNCG 162
Query: 195 -----LKVSNILLDKDINP-KISDFGMARICGGNELQANT-SRIVGTYGYMSPEYAIQGI 247
+K NIL+D + K+ DFG G L+ + GT Y PE+
Sbjct: 163 VLHRDIKDENILIDLNRGELKLIDFG-----SGALLKDTVYTDFDGTRVYSPPEWIRYHR 217
Query: 248 FSIKS-DVFSFGVLLLEIVSG 267
+ +S V+S G+LL ++V G
Sbjct: 218 YHGRSAAVWSLGILLYDMVCG 238
>pdb|4ALV|A Chain A, Benzofuropyrimidinone Inhibitors Of Pim-1
pdb|4ALW|A Chain A, Benzofuropyrimidinone Inhibitors Of Pim-1
Length = 328
Score = 33.1 bits (74), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 54/201 (26%), Positives = 81/201 (40%), Gaps = 36/201 (17%)
Query: 97 LGEGGFGPVYKGV-LKKGDEIAVKRLPGRSGQGLREMKN------EASVIAKVQ--HKNL 147
LG GGFG VY G+ + +A+K + E+ N E ++ KV +
Sbjct: 59 LGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGV 118
Query: 148 VRLLGCCIDKDEKILIYEYMPNKSLDFFLFDPTKRMLLD-------WSANYSSR------ 194
+RLL D +LI E P D F F + L + W + R
Sbjct: 119 IRLLDWFERPDSFVLILE-RPEPVQDLFDFITERGALQEELARSFFWQVLEAVRHCHNCG 177
Query: 195 -----LKVSNILLDKDINP-KISDFGMARICGGNELQANT-SRIVGTYGYMSPEYAIQGI 247
+K NIL+D + K+ DFG G L+ + GT Y PE+
Sbjct: 178 VLHRDIKDENILIDLNRGELKLIDFG-----SGALLKDTVYTDFDGTRVYSPPEWIRYHR 232
Query: 248 FSIKS-DVFSFGVLLLEIVSG 267
+ +S V+S G+LL ++V G
Sbjct: 233 YHGRSAAVWSLGILLYDMVCG 253
>pdb|4DTK|A Chain A, Novel And Selective Pan-Pim Kinase Inhibitor
Length = 276
Score = 33.1 bits (74), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 54/201 (26%), Positives = 81/201 (40%), Gaps = 36/201 (17%)
Query: 97 LGEGGFGPVYKGV-LKKGDEIAVKRLPGRSGQGLREMKN------EASVIAKVQ--HKNL 147
LG GGFG VY G+ + +A+K + E+ N E ++ KV +
Sbjct: 15 LGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGV 74
Query: 148 VRLLGCCIDKDEKILIYEYMPNKSLDFFLFDPTKRMLLD-------WSANYSSR------ 194
+RLL D +LI E P D F F + L + W + R
Sbjct: 75 IRLLDWFERPDSFVLILE-RPEPVQDLFDFITERGALQEELARSFFWQVLEAVRHCHNCG 133
Query: 195 -----LKVSNILLDKDINP-KISDFGMARICGGNELQANT-SRIVGTYGYMSPEYAIQGI 247
+K NIL+D + K+ DFG G L+ + GT Y PE+
Sbjct: 134 VLHRDIKDENILIDLNRGELKLIDFG-----SGALLKDTVYTDFDGTRVYSPPEWIRYHR 188
Query: 248 FSIKS-DVFSFGVLLLEIVSG 267
+ +S V+S G+LL ++V G
Sbjct: 189 YHGRSAAVWSLGILLYDMVCG 209
>pdb|2XJ0|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-4 From
Crystallographic Fragment Screen
Length = 301
Score = 33.1 bits (74), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 54/201 (26%), Positives = 81/201 (40%), Gaps = 36/201 (17%)
Query: 97 LGEGGFGPVYKGV-LKKGDEIAVKRLPGRSGQGLREMKN------EASVIAKVQ--HKNL 147
LG GGFG VY G+ + +A+K + E+ N E ++ KV +
Sbjct: 32 LGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGV 91
Query: 148 VRLLGCCIDKDEKILIYEYMPNKSLDFFLFDPTKRMLLD-------WSANYSSR------ 194
+RLL D +LI E P D F F + L + W + R
Sbjct: 92 IRLLDWFERPDSFVLILE-RPEPVQDLFDFITERGALQEELARSFFWQVLEAVRHCHNCG 150
Query: 195 -----LKVSNILLDKDINP-KISDFGMARICGGNELQANT-SRIVGTYGYMSPEYAIQGI 247
+K NIL+D + K+ DFG G L+ + GT Y PE+
Sbjct: 151 VLHRDIKDENILIDLNRGELKLIDFG-----SGALLKDTVYTDFDGTRVYSPPEWIRYHR 205
Query: 248 FSIKS-DVFSFGVLLLEIVSG 267
+ +S V+S G+LL ++V G
Sbjct: 206 YHGRSAAVWSLGILLYDMVCG 226
>pdb|1YHS|A Chain A, Crystal Structure Of Pim-1 Bound To Staurosporine
pdb|1YI3|A Chain A, Crystal Structure Of Pim-1 Bound To Ly294002
pdb|1YI4|A Chain A, Structure Of Pim-1 Bound To Adenosine
Length = 273
Score = 33.1 bits (74), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 53/200 (26%), Positives = 79/200 (39%), Gaps = 34/200 (17%)
Query: 97 LGEGGFGPVYKGV-LKKGDEIAVKRLPGRSGQGLREMKN------EASVIAKVQ--HKNL 147
LG GGFG VY G+ + +A+K + E+ N E ++ KV +
Sbjct: 12 LGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGV 71
Query: 148 VRLLGCCIDKDEKILIYEYMPNKSLDFFLFDPTKRMLLD-------WSANYSSR------ 194
+RLL D +LI E P D F F + L + W + R
Sbjct: 72 IRLLDWFERPDSFVLILE-RPEPVQDLFDFITERGALQEELARSFFWQVLEAVRHCHNXG 130
Query: 195 -----LKVSNILLDKDINP-KISDFGMARICGGNELQANTSRIVGTYGYMSPEYAIQGIF 248
+K NIL+D + K+ DFG G + GT Y PE+ +
Sbjct: 131 VLHRDIKDENILIDLNRGELKLIDFG----SGALLKDTVYTDFDGTRVYSPPEWIRYHRY 186
Query: 249 SIKS-DVFSFGVLLLEIVSG 267
+S V+S G+LL ++V G
Sbjct: 187 HGRSAAVWSLGILLYDMVCG 206
>pdb|3MA3|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Naphtho-Difuran Ligand
Length = 313
Score = 33.1 bits (74), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 54/201 (26%), Positives = 81/201 (40%), Gaps = 36/201 (17%)
Query: 97 LGEGGFGPVYKGV-LKKGDEIAVKRLPGRSGQGLREMKN------EASVIAKVQ--HKNL 147
LG GGFG VY G+ + +A+K + E+ N E ++ KV +
Sbjct: 45 LGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGV 104
Query: 148 VRLLGCCIDKDEKILIYEYMPNKSLDFFLFDPTKRMLLD-------WSANYSSR------ 194
+RLL D +LI E P D F F + L + W + R
Sbjct: 105 IRLLDWFERPDSFVLILE-RPEPVQDLFDFITERGALQEELARSFFWQVLEAVRHCHNCG 163
Query: 195 -----LKVSNILLDKDINP-KISDFGMARICGGNELQANT-SRIVGTYGYMSPEYAIQGI 247
+K NIL+D + K+ DFG G L+ + GT Y PE+
Sbjct: 164 VLHRDIKDENILIDLNRGELKLIDFG-----SGALLKDTVYTDFDGTRVYSPPEWIRYHR 218
Query: 248 FSIKS-DVFSFGVLLLEIVSG 267
+ +S V+S G+LL ++V G
Sbjct: 219 YHGRSAAVWSLGILLYDMVCG 239
>pdb|2J2I|B Chain B, Crystal Structure Of The Humab Pim1 In Complex With
Ly333531
Length = 312
Score = 33.1 bits (74), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 54/201 (26%), Positives = 81/201 (40%), Gaps = 36/201 (17%)
Query: 97 LGEGGFGPVYKGV-LKKGDEIAVKRLPGRSGQGLREMKN------EASVIAKVQ--HKNL 147
LG GGFG VY G+ + +A+K + E+ N E ++ KV +
Sbjct: 44 LGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGV 103
Query: 148 VRLLGCCIDKDEKILIYEYMPNKSLDFFLFDPTKRMLLD-------WSANYSSR------ 194
+RLL D +LI E P D F F + L + W + R
Sbjct: 104 IRLLDWFERPDSFVLILE-RPEPVQDLFDFITERGALQEELARSFFWQVLEAVRHCHNCG 162
Query: 195 -----LKVSNILLDKDINP-KISDFGMARICGGNELQANT-SRIVGTYGYMSPEYAIQGI 247
+K NIL+D + K+ DFG G L+ + GT Y PE+
Sbjct: 163 VLHRDIKDENILIDLNRGELKLIDFG-----SGALLKDTVYTDFDGTRVYSPPEWIRYHR 217
Query: 248 FSIKS-DVFSFGVLLLEIVSG 267
+ +S V+S G+LL ++V G
Sbjct: 218 YHGRSAAVWSLGILLYDMVCG 238
>pdb|3CXW|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Beta Carboline Ligand I
pdb|3CY2|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Beta Carboline Ligand Ii
Length = 314
Score = 33.1 bits (74), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 54/201 (26%), Positives = 81/201 (40%), Gaps = 36/201 (17%)
Query: 97 LGEGGFGPVYKGV-LKKGDEIAVKRLPGRSGQGLREMKN------EASVIAKVQ--HKNL 147
LG GGFG VY G+ + +A+K + E+ N E ++ KV +
Sbjct: 45 LGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGV 104
Query: 148 VRLLGCCIDKDEKILIYEYMPNKSLDFFLFDPTKRMLLD-------WSANYSSR------ 194
+RLL D +LI E P D F F + L + W + R
Sbjct: 105 IRLLDWFERPDSFVLILE-RPEPVQDLFDFITERGALQEELARSFFWQVLEAVRHCHNCG 163
Query: 195 -----LKVSNILLDKDINP-KISDFGMARICGGNELQANT-SRIVGTYGYMSPEYAIQGI 247
+K NIL+D + K+ DFG G L+ + GT Y PE+
Sbjct: 164 VLHRDIKDENILIDLNRGELKLIDFG-----SGALLKDTVYTDFDGTRVYSPPEWIRYHR 218
Query: 248 FSIKS-DVFSFGVLLLEIVSG 267
+ +S V+S G+LL ++V G
Sbjct: 219 YHGRSAAVWSLGILLYDMVCG 239
>pdb|1YWV|A Chain A, Crystal Structures Of Proto-Oncogene Kinase Pim1: A Target
Of Aberrant Somatic Hypermutations In Diffuse Large Cell
Lymphoma
pdb|1YXT|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With Amppnp
pdb|1YXU|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXU|B Chain B, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXU|C Chain C, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXU|D Chain D, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXV|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With
3,4-Dihydroxy-1- Methylquinolin-2(1h)-One
pdb|1YXX|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With
(3e)-3-[(4- Hydroxyphenyl)imino]-1h-Indol-2(3h)-One
pdb|2O3P|A Chain A, Crystal Structure Of Pim1 With Quercetin
pdb|2O63|A Chain A, Crystal Structure Of Pim1 With Myricetin
pdb|2O64|A Chain A, Crystal Structure Of Pim1 With Quercetagetin
pdb|2O65|A Chain A, Crystal Structure Of Pim1 With Pentahydroxyflavone
Length = 293
Score = 33.1 bits (74), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 52/200 (26%), Positives = 79/200 (39%), Gaps = 34/200 (17%)
Query: 97 LGEGGFGPVYKGV-LKKGDEIAVKRLPGRSGQGLREMKN------EASVIAKVQ--HKNL 147
LG GGFG VY G+ + +A+K + E+ N E ++ KV +
Sbjct: 16 LGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGV 75
Query: 148 VRLLGCCIDKDEKILIYEYMPNKSLDFFLFDPTKRMLLD-------WSANYSSR------ 194
+RLL D +LI E P D F F + L + W + R
Sbjct: 76 IRLLDWFERPDSFVLILE-RPEPVQDLFDFITERGALQEELARSFFWQVLEAVRHCHNCG 134
Query: 195 -----LKVSNILLDKDINP-KISDFGMARICGGNELQANTSRIVGTYGYMSPEYAIQGIF 248
+K NIL+D + K+ DFG + + GT Y PE+ +
Sbjct: 135 VLHRDIKDENILIDLNRGELKLIDFGSGALLK----DTVYTDFDGTRVYSPPEWIRYHRY 190
Query: 249 SIKS-DVFSFGVLLLEIVSG 267
+S V+S G+LL ++V G
Sbjct: 191 HGRSAAVWSLGILLYDMVCG 210
>pdb|2XIY|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-2 From
Crystallographic Fragment Screen
pdb|2XIZ|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-3 From
Crystallographic Fragment Screen
pdb|2XJ1|A Chain A, Protein Kinase Pim-1 In Complex With Small Molecule
Inibitor
pdb|2XJ2|A Chain A, Protein Kinase Pim-1 In Complex With Small Molecule
Inhibitor
Length = 301
Score = 33.1 bits (74), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 54/201 (26%), Positives = 81/201 (40%), Gaps = 36/201 (17%)
Query: 97 LGEGGFGPVYKGV-LKKGDEIAVKRLPGRSGQGLREMKN------EASVIAKVQ--HKNL 147
LG GGFG VY G+ + +A+K + E+ N E ++ KV +
Sbjct: 32 LGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGV 91
Query: 148 VRLLGCCIDKDEKILIYEYMPNKSLDFFLFDPTKRMLLD-------WSANYSSR------ 194
+RLL D +LI E P D F F + L + W + R
Sbjct: 92 IRLLDWFERPDSFVLILE-RPEPVQDLFDFITERGALQEELARSFFWQVLEAVRHCHNCG 150
Query: 195 -----LKVSNILLDKDINP-KISDFGMARICGGNELQANT-SRIVGTYGYMSPEYAIQGI 247
+K NIL+D + K+ DFG G L+ + GT Y PE+
Sbjct: 151 VLHRDIKDENILIDLNRGELKLIDFG-----SGALLKDTVYTDFDGTRVYSPPEWIRYHR 205
Query: 248 FSIKS-DVFSFGVLLLEIVSG 267
+ +S V+S G+LL ++V G
Sbjct: 206 YHGRSAAVWSLGILLYDMVCG 226
>pdb|2BIL|B Chain B, The Human Protein Kinase Pim1 In Complex With Its
Consensus Peptide Pimtide
pdb|2BZJ|A Chain A, Crystal Structure Of The Human Pim1 In Complex With A
Ruthenium Organometallic Ligand Ru3
pdb|2BZK|B Chain B, Crystal Structure Of The Human Pim1 In Complex With Amppnp
And Pimtide
pdb|2C3I|B Chain B, Crystal Structure Of Human Pim1 In Complex With
Imidazopyridazin I
pdb|2BZH|B Chain B, Crystal Structure Of The Human Pim1 In Complex With A
Ruthenium Organometallic Ligand Ru1
pdb|2OI4|X Chain X, Crystal Structure Of Human Pim1 In Complex With
Fluorinated Ruthenium Pyridocarbazole
pdb|3BWF|A Chain A, Crystal Structure Of The Human Pim1 In Complex With An
Osmium Compound
Length = 313
Score = 33.1 bits (74), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 54/201 (26%), Positives = 81/201 (40%), Gaps = 36/201 (17%)
Query: 97 LGEGGFGPVYKGV-LKKGDEIAVKRLPGRSGQGLREMKN------EASVIAKVQ--HKNL 147
LG GGFG VY G+ + +A+K + E+ N E ++ KV +
Sbjct: 44 LGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGV 103
Query: 148 VRLLGCCIDKDEKILIYEYMPNKSLDFFLFDPTKRMLLD-------WSANYSSR------ 194
+RLL D +LI E P D F F + L + W + R
Sbjct: 104 IRLLDWFERPDSFVLILE-RPEPVQDLFDFITERGALQEELARSFFWQVLEAVRHCHNCG 162
Query: 195 -----LKVSNILLDKDINP-KISDFGMARICGGNELQANT-SRIVGTYGYMSPEYAIQGI 247
+K NIL+D + K+ DFG G L+ + GT Y PE+
Sbjct: 163 VLHRDIKDENILIDLNRGELKLIDFG-----SGALLKDTVYTDFDGTRVYSPPEWIRYHR 217
Query: 248 FSIKS-DVFSFGVLLLEIVSG 267
+ +S V+S G+LL ++V G
Sbjct: 218 YHGRSAAVWSLGILLYDMVCG 238
>pdb|3CY3|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And
The Jnk Inhibitor V
Length = 314
Score = 33.1 bits (74), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 54/201 (26%), Positives = 81/201 (40%), Gaps = 36/201 (17%)
Query: 97 LGEGGFGPVYKGV-LKKGDEIAVKRLPGRSGQGLREMKN------EASVIAKVQ--HKNL 147
LG GGFG VY G+ + +A+K + E+ N E ++ KV +
Sbjct: 45 LGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGV 104
Query: 148 VRLLGCCIDKDEKILIYEYMPNKSLDFFLFDPTKRMLLD-------WSANYSSR------ 194
+RLL D +LI E P D F F + L + W + R
Sbjct: 105 IRLLDWFERPDSFVLILE-RPEPVQDLFDFITERGALQEELARSFFWQVLEAVRHCHNCG 163
Query: 195 -----LKVSNILLDKDINP-KISDFGMARICGGNELQANT-SRIVGTYGYMSPEYAIQGI 247
+K NIL+D + K+ DFG G L+ + GT Y PE+
Sbjct: 164 VLHRDIKDENILIDLNRGELKLIDFG-----SGALLKDTVYTDFDGTRVYSPPEWIRYHR 218
Query: 248 FSIKS-DVFSFGVLLLEIVSG 267
+ +S V+S G+LL ++V G
Sbjct: 219 YHGRSAAVWSLGILLYDMVCG 239
>pdb|4AS0|A Chain A, Cyclometalated Phthalimides As Protein Kinase Inhibitors
Length = 273
Score = 33.1 bits (74), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 54/201 (26%), Positives = 81/201 (40%), Gaps = 36/201 (17%)
Query: 97 LGEGGFGPVYKGV-LKKGDEIAVKRLPGRSGQGLREMKN------EASVIAKVQ--HKNL 147
LG GGFG VY G+ + +A+K + E+ N E ++ KV +
Sbjct: 12 LGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGV 71
Query: 148 VRLLGCCIDKDEKILIYEYMPNKSLDFFLFDPTKRMLLD-------WSANYSSR------ 194
+RLL D +LI E P D F F + L + W + R
Sbjct: 72 IRLLDWFERPDSFVLILE-RPEPVQDLFDFITERGALQEELARSFFWQVLEAVRHCHNCG 130
Query: 195 -----LKVSNILLDKDINP-KISDFGMARICGGNELQANT-SRIVGTYGYMSPEYAIQGI 247
+K NIL+D + K+ DFG G L+ + GT Y PE+
Sbjct: 131 VLHRDIKDENILIDLNRGELKLIDFG-----SGALLKDTVYTDFDGTRVYSPPEWIRYHR 185
Query: 248 FSIKS-DVFSFGVLLLEIVSG 267
+ +S V+S G+LL ++V G
Sbjct: 186 YHGRSAAVWSLGILLYDMVCG 206
>pdb|3JXW|A Chain A, Discovery Of 3h-Benzo[4,5]thieno[3,2-D]pyrimidin-4-Ones As
Potent, Highly Selective And Orally Bioavailable Pim
Kinases Inhibitors
pdb|3JY0|A Chain A, Discovery Of 3h-Benzo[4,5]thieno[3,2-D]pyrimidin-4-Ones As
Potent, Highly Selective And Orally Bioavailable Pim
Kinases Inhibitors
pdb|3JYA|A Chain A, Discovery Of 3h-Benzo[4,5]thieno[3,2-D]pyrimidin-4-Ones As
Potent, Highly Selective And Orally Bioavailable Pim
Kinases Inhibitors
Length = 294
Score = 33.1 bits (74), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 54/201 (26%), Positives = 81/201 (40%), Gaps = 36/201 (17%)
Query: 97 LGEGGFGPVYKGV-LKKGDEIAVKRLPGRSGQGLREMKN------EASVIAKVQ--HKNL 147
LG GGFG VY G+ + +A+K + E+ N E ++ KV +
Sbjct: 17 LGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGV 76
Query: 148 VRLLGCCIDKDEKILIYEYMPNKSLDFFLFDPTKRMLLD-------WSANYSSR------ 194
+RLL D +LI E P D F F + L + W + R
Sbjct: 77 IRLLDWFERPDSFVLILE-RPEPVQDLFDFITERGALQEELARSFFWQVLEAVRHCHNCG 135
Query: 195 -----LKVSNILLDKDINP-KISDFGMARICGGNELQANT-SRIVGTYGYMSPEYAIQGI 247
+K NIL+D + K+ DFG G L+ + GT Y PE+
Sbjct: 136 VLHRDIKDENILIDLNRGELKLIDFG-----SGALLKDTVYTDFDGTRVYSPPEWIRYHR 190
Query: 248 FSIKS-DVFSFGVLLLEIVSG 267
+ +S V+S G+LL ++V G
Sbjct: 191 YHGRSAAVWSLGILLYDMVCG 211
>pdb|3UIX|A Chain A, Crystal Structure Of Pim1 Kinase In Complex With Small
Molecule Inhibitor
pdb|3UMX|A Chain A, Crystal Structure Of Pim1 Kinase In Complex With Inhibitor
(Z)-2-[(1h-
Indol-3-Yl)methylene]-7-(Azepan-1-Ylmethyl)-6-
Hydroxybenzofuran- 3(2h)-One
pdb|4ENX|A Chain A, Crystal Structure Of Pim-1 Kinase In Complex With
Inhibitor (2e,5z)-2-
(2-Chlorophenylimino)-5-(4-Hydroxy-3-
Nitrobenzylidene)thiazolidin-4- One
pdb|4ENY|A Chain A, Crystal Structure Of Pim-1 Kinase In Complex With
(2e,5z)-2-(2-
Chlorophenylimino)-5-(4-Hydroxy-3-
Methoxybenzylidene)thiazolidin-4- One
pdb|3UMW|A Chain A, Crystal Structure Of Pim1 Kinase In Complex With Inhibitor
(Z)-2-[(1h-
Indazol-3-Yl)methylene]-6-Methoxy-7-(Piperazin-1-
Ylmethyl)benzofuran- 3(2h)-One
Length = 298
Score = 32.7 bits (73), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 52/200 (26%), Positives = 79/200 (39%), Gaps = 34/200 (17%)
Query: 97 LGEGGFGPVYKGV-LKKGDEIAVKRLPGRSGQGLREMKN------EASVIAKVQ--HKNL 147
LG GGFG VY G+ + +A+K + E+ N E ++ KV +
Sbjct: 17 LGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGV 76
Query: 148 VRLLGCCIDKDEKILIYEYMPNKSLDFFLFDPTKRMLLD-------WSANYSSR------ 194
+RLL D +LI E P D F F + L + W + R
Sbjct: 77 IRLLDWFERPDSFVLILE-RPEPVQDLFDFITERGALQEELARSFFWQVLEAVRHCHNCG 135
Query: 195 -----LKVSNILLDKDINP-KISDFGMARICGGNELQANTSRIVGTYGYMSPEYAIQGIF 248
+K NIL+D + K+ DFG + + GT Y PE+ +
Sbjct: 136 VLHRDIKDENILIDLNRGELKLIDFGSGALLK----DTVYTDFDGTRVYSPPEWIRYHRY 191
Query: 249 SIKS-DVFSFGVLLLEIVSG 267
+S V+S G+LL ++V G
Sbjct: 192 HGRSAAVWSLGILLYDMVCG 211
>pdb|2XIX|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-1 From
Crystallographic Fragment Screen
Length = 301
Score = 32.7 bits (73), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 54/201 (26%), Positives = 81/201 (40%), Gaps = 36/201 (17%)
Query: 97 LGEGGFGPVYKGV-LKKGDEIAVKRLPGRSGQGLREMKN------EASVIAKVQ--HKNL 147
LG GGFG VY G+ + +A+K + E+ N E ++ KV +
Sbjct: 32 LGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGV 91
Query: 148 VRLLGCCIDKDEKILIYEYMPNKSLDFFLFDPTKRMLLD-------WSANYSSR------ 194
+RLL D +LI E P D F F + L + W + R
Sbjct: 92 IRLLDWFERPDSFVLILE-RPEPVQDLFDFITERGALQEELARSFFWQVLEAVRHCHNCG 150
Query: 195 -----LKVSNILLDKDINP-KISDFGMARICGGNELQANT-SRIVGTYGYMSPEYAIQGI 247
+K NIL+D + K+ DFG G L+ + GT Y PE+
Sbjct: 151 VLHRDIKDENILIDLNRGELKLIDFG-----SGALLKDTVYTDFDGTRVYSPPEWIRYHR 205
Query: 248 FSIKS-DVFSFGVLLLEIVSG 267
+ +S V+S G+LL ++V G
Sbjct: 206 YHGRSAAVWSLGILLYDMVCG 226
>pdb|3ANQ|A Chain A, Human Dyrk1aINHIBITOR COMPLEX
pdb|3ANQ|B Chain B, Human Dyrk1aINHIBITOR COMPLEX
pdb|3ANQ|C Chain C, Human Dyrk1aINHIBITOR COMPLEX
pdb|3ANQ|D Chain D, Human Dyrk1aINHIBITOR COMPLEX
pdb|3ANR|A Chain A, Human Dyrk1aHARMINE COMPLEX
pdb|3ANR|B Chain B, Human Dyrk1aHARMINE COMPLEX
pdb|3ANR|C Chain C, Human Dyrk1aHARMINE COMPLEX
pdb|3ANR|D Chain D, Human Dyrk1aHARMINE COMPLEX
Length = 368
Score = 32.7 bits (73), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 27/79 (34%), Positives = 38/79 (48%), Gaps = 13/79 (16%)
Query: 195 LKVSNILLDKDINPK-----ISDFGMARICGGNELQANTSRIVGTYGYMSPEYAIQGIFS 249
LK NILL NPK I DFG + G Q SR Y SPE + +
Sbjct: 166 LKPENILL---CNPKRSAIKIVDFGSSCQLGQRIYQXIQSRF-----YRSPEVLLGMPYD 217
Query: 250 IKSDVFSFGVLLLEIVSGK 268
+ D++S G +L+E+ +G+
Sbjct: 218 LAIDMWSLGCILVEMHTGE 236
>pdb|3A99|A Chain A, Structure Of Pim-1 Kinase Crystallized In The Presence Of
P27kip1 Carboxy-Terminal Peptide
Length = 320
Score = 32.7 bits (73), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 54/201 (26%), Positives = 81/201 (40%), Gaps = 36/201 (17%)
Query: 97 LGEGGFGPVYKGV-LKKGDEIAVKRLPGRSGQGLREMKN------EASVIAKVQ--HKNL 147
LG GGFG VY G+ + +A+K + E+ N E ++ KV +
Sbjct: 51 LGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGV 110
Query: 148 VRLLGCCIDKDEKILIYEYMPNKSLDFFLFDPTKRMLLD-------WSANYSSR------ 194
+RLL D +LI E P D F F + L + W + R
Sbjct: 111 IRLLDWFERPDSFVLILE-RPEPVQDLFDFITERGALQEELARSFFWQVLEAVRHCHNCG 169
Query: 195 -----LKVSNILLDKDINP-KISDFGMARICGGNELQANT-SRIVGTYGYMSPEYAIQGI 247
+K NIL+D + K+ DFG G L+ + GT Y PE+
Sbjct: 170 VLHRDIKDENILIDLNRGELKLIDFG-----SGALLKDTVYTDFDGTRVYSPPEWIRYHR 224
Query: 248 FSIKS-DVFSFGVLLLEIVSG 267
+ +S V+S G+LL ++V G
Sbjct: 225 YHGRSAAVWSLGILLYDMVCG 245
>pdb|2OBJ|A Chain A, Crystal Structure Of Human Pim-1 Kinase In Complex With
Inhibitor
pdb|3BGP|A Chain A, Human Pim-1 Complexed With A Benzoisoxazole Inhibitor Vx1
pdb|3BGQ|A Chain A, Human Pim-1 Kinase In Complex With An Triazolo Pyridazine
Inhibitor Vx2
pdb|3BGZ|A Chain A, Human Pim-1 Kinase In Complex With Diphenyl Indole
Inhibitor Vx3
Length = 333
Score = 32.7 bits (73), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 54/201 (26%), Positives = 81/201 (40%), Gaps = 36/201 (17%)
Query: 97 LGEGGFGPVYKGV-LKKGDEIAVKRLPGRSGQGLREMKN------EASVIAKVQ--HKNL 147
LG GGFG VY G+ + +A+K + E+ N E ++ KV +
Sbjct: 64 LGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGV 123
Query: 148 VRLLGCCIDKDEKILIYEYMPNKSLDFFLFDPTKRMLLD-------WSANYSSR------ 194
+RLL D +LI E P D F F + L + W + R
Sbjct: 124 IRLLDWFERPDSFVLILE-RPEPVQDLFDFITERGALQEELARSFFWQVLEAVRHCHNCG 182
Query: 195 -----LKVSNILLDKDINP-KISDFGMARICGGNELQANT-SRIVGTYGYMSPEYAIQGI 247
+K NIL+D + K+ DFG G L+ + GT Y PE+
Sbjct: 183 VLHRDIKDENILIDLNRGELKLIDFG-----SGALLKDTVYTDFDGTRVYSPPEWIRYHR 237
Query: 248 FSIKS-DVFSFGVLLLEIVSG 267
+ +S V+S G+LL ++V G
Sbjct: 238 YHGRSAAVWSLGILLYDMVCG 258
>pdb|2VX3|A Chain A, Crystal Structure Of The Human Dual Specificity Tyrosine-
Phosphorylation-Regulated Kinase 1a
pdb|2VX3|B Chain B, Crystal Structure Of The Human Dual Specificity Tyrosine-
Phosphorylation-Regulated Kinase 1a
pdb|2VX3|C Chain C, Crystal Structure Of The Human Dual Specificity Tyrosine-
Phosphorylation-Regulated Kinase 1a
pdb|2VX3|D Chain D, Crystal Structure Of The Human Dual Specificity Tyrosine-
Phosphorylation-Regulated Kinase 1a
pdb|2WO6|A Chain A, Human Dual-Specificity Tyrosine-Phosphorylation-Regulated
Kinase 1a In Complex With A Consensus Substrate Peptide
pdb|2WO6|B Chain B, Human Dual-Specificity Tyrosine-Phosphorylation-Regulated
Kinase 1a In Complex With A Consensus Substrate Peptide
Length = 382
Score = 32.7 bits (73), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 27/79 (34%), Positives = 38/79 (48%), Gaps = 13/79 (16%)
Query: 195 LKVSNILLDKDINPK-----ISDFGMARICGGNELQANTSRIVGTYGYMSPEYAIQGIFS 249
LK NILL NPK I DFG + G Q SR Y SPE + +
Sbjct: 185 LKPENILL---CNPKRSAIKIVDFGSSCQLGQRIYQXIQSRF-----YRSPEVLLGMPYD 236
Query: 250 IKSDVFSFGVLLLEIVSGK 268
+ D++S G +L+E+ +G+
Sbjct: 237 LAIDMWSLGCILVEMHTGE 255
>pdb|4A7C|A Chain A, Crystal Structure Of Pim1 Kinase With Etp46546
Length = 308
Score = 32.3 bits (72), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 52/200 (26%), Positives = 79/200 (39%), Gaps = 34/200 (17%)
Query: 97 LGEGGFGPVYKGV-LKKGDEIAVKRLPGRSGQGLREMKN------EASVIAKVQ--HKNL 147
LG GGFG VY G+ + +A+K + E+ N E ++ KV +
Sbjct: 39 LGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGV 98
Query: 148 VRLLGCCIDKDEKILIYEYMPNKSLDFFLFDPTKRMLLD-------WSANYSSR------ 194
+RLL D +LI E P D F F + L + W + R
Sbjct: 99 IRLLDWFERPDSFVLILE-RPEPVQDLFDFITERGALQEELARSFFWQVLEAVRHCHNCG 157
Query: 195 -----LKVSNILLDKDINP-KISDFGMARICGGNELQANTSRIVGTYGYMSPEYAIQGIF 248
+K NIL+D + K+ DFG + + GT Y PE+ +
Sbjct: 158 VLHRDIKDENILIDLNRGELKLIDFGSGALLK----DTVYTDFDGTRVYSPPEWIRYHRY 213
Query: 249 SIKS-DVFSFGVLLLEIVSG 267
+S V+S G+LL ++V G
Sbjct: 214 HGRSAAVWSLGILLYDMVCG 233
>pdb|2IWI|A Chain A, Crystal Structure Of The Human Pim2 In Complex With A
Ruthenium Organometallic Ligand Ru1
pdb|2IWI|B Chain B, Crystal Structure Of The Human Pim2 In Complex With A
Ruthenium Organometallic Ligand Ru1
Length = 312
Score = 32.3 bits (72), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 51/202 (25%), Positives = 88/202 (43%), Gaps = 36/202 (17%)
Query: 97 LGEGGFGPVYKGV-LKKGDEIAVKRLPGRSGQGLREMKN------EASVIAKV----QHK 145
LG+GGFG V+ G L ++A+K +P G + + E +++ KV H
Sbjct: 39 LGKGGFGTVFAGHRLTDRLQVAIKVIPRNRVLGWSPLSDSVTCPLEVALLWKVGAGGGHP 98
Query: 146 NLVRLLGCCIDKDEKILIYEYMPNKSLDFFLFDPTKRMLLDWSA------------NYSS 193
++RLL ++ +L+ E P + D F + K L + + + S
Sbjct: 99 GVIRLLDWFETQEGFMLVLE-RPLPAQDLFDYITEKGPLGEGPSRCFFGQVVAAIQHCHS 157
Query: 194 R------LKVSNILLD-KDINPKISDFGMARICGGNELQANTSRIVGTYGYMSPEYAIQG 246
R +K NIL+D + K+ DFG G + GT Y PE+ +
Sbjct: 158 RGVVHRDIKDENILIDLRRGCAKLIDFG----SGALLHDEPYTDFDGTRVYSPPEWISRH 213
Query: 247 IF-SIKSDVFSFGVLLLEIVSG 267
+ ++ + V+S G+LL ++V G
Sbjct: 214 QYHALPATVWSLGILLYDMVCG 235
>pdb|1YXS|A Chain A, Crystal Structure Of Kinase Pim1 With P123m Mutation
Length = 293
Score = 32.0 bits (71), Expect = 0.54, Method: Compositional matrix adjust.
Identities = 54/201 (26%), Positives = 81/201 (40%), Gaps = 36/201 (17%)
Query: 97 LGEGGFGPVYKGV-LKKGDEIAVKRLPGRSGQGLREMKN------EASVIAKVQ--HKNL 147
LG GGFG VY G+ + +A+K + E+ N E ++ KV +
Sbjct: 16 LGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGV 75
Query: 148 VRLLGCCIDKDEKILIYEYMPNKSLDFFLFDPTKRMLLD-------WSANYSSR------ 194
+RLL D +LI E M D F F + L + W + R
Sbjct: 76 IRLLDWFERPDSFVLILERM-EPVQDLFDFITERGALQEELARSFFWQVLEAVRHCHNCG 134
Query: 195 -----LKVSNILLDKDINP-KISDFGMARICGGNELQANT-SRIVGTYGYMSPEYAIQGI 247
+K NIL+D + K+ DFG G L+ + GT Y PE+
Sbjct: 135 VLHRDIKDENILIDLNRGELKLIDFG-----SGALLKDTVYTDFDGTRVYSPPEWIRYHR 189
Query: 248 FSIKS-DVFSFGVLLLEIVSG 267
+ +S V+S G+LL ++V G
Sbjct: 190 YHGRSAAVWSLGILLYDMVCG 210
>pdb|2AC3|A Chain A, Structure Of Human Mnk2 Kinase Domain
Length = 316
Score = 32.0 bits (71), Expect = 0.68, Method: Compositional matrix adjust.
Identities = 57/227 (25%), Positives = 93/227 (40%), Gaps = 48/227 (21%)
Query: 83 SVSTATNKFSDANKL-----GEGGFGPVYKGV-LKKGDEIAVKRLPGRSGQGLREMKNEA 136
S + + +F D +L GEG V + L E AVK + + G + E
Sbjct: 2 STDSFSGRFEDVYQLQEDVLGEGAHARVQTCINLITSQEYAVKIIEKQPGHIRSRVFREV 61
Query: 137 SVIAKVQ-HKNLVRLLGCCIDKDEKILIYEYMPNKSLDFFLFDPTKRM------------ 183
++ + Q H+N++ L+ ++D L++E M S+ L KR
Sbjct: 62 EMLYQCQGHRNVLELIEFFEEEDRFYLVFEKMRGGSI---LSHIHKRRHFNELEASVVVQ 118
Query: 184 ----LLDWSAN---YSSRLKVSNILLDK--DINP-KISDFGMARICGGNELQANTSRI-- 231
LD+ N LK NIL + ++P KI DF + G +L + S I
Sbjct: 119 DVASALDFLHNKGIAHRDLKPENILCEHPNQVSPVKICDFDLG---SGIKLNGDCSPIST 175
Query: 232 ------VGTYGYMSPEYAIQ-----GIFSIKSDVFSFGVLLLEIVSG 267
G+ YM+PE I+ + D++S GV+L ++SG
Sbjct: 176 PELLTPCGSAEYMAPEVVEAFSEEASIYDKRCDLWSLGVILYILLSG 222
>pdb|3RGF|A Chain A, Crystal Structure Of Human Cdk8CYCC
Length = 405
Score = 31.6 bits (70), Expect = 0.75, Method: Compositional matrix adjust.
Identities = 52/230 (22%), Positives = 96/230 (41%), Gaps = 49/230 (21%)
Query: 96 KLGEGGFGPVYKGVLKKGDEIAVKRLPGRSGQGLR-EMKNEASVIAKVQHKNLVRLLGCC 154
K+G G +G VYK K G + L G G+ E +++ +++H N++ L
Sbjct: 28 KVGRGTYGHVYKAKRKDGKDDKDYALKQIEGTGISMSACREIALLRELKHPNVISLQKVF 87
Query: 155 IDK-DEKI-LIYEYMPN--------------------------KSLDFFLFDPTKRMLLD 186
+ D K+ L+++Y + KSL + + D + +
Sbjct: 88 LSHADRKVWLLFDYAEHDLWHIIKFHRASKANKKPVQLPRGMVKSLLYQILDGIHYLHAN 147
Query: 187 WSANYSSRLKVSNILLDKDINP-----KISDFGMARICGGN-ELQANTSRIVGTYGYMSP 240
W + LK +NIL+ + P KI+D G AR+ + A+ +V T+ Y +P
Sbjct: 148 WVLHRD--LKPANILVMGE-GPERGRVKIADMGFARLFNSPLKPLADLDPVVVTFWYRAP 204
Query: 241 EYAIQGIFSIKS-DVFSFGVLLLEIVSGK----------KTTGFYRTDSL 279
E + K+ D+++ G + E+++ + KT+ Y D L
Sbjct: 205 ELLLGARHYTKAIDIWAIGCIFAELLTSEPIFHCRQEDIKTSNPYHHDQL 254
>pdb|3NIE|A Chain A, Crystal Structure Of Pf11_0147
pdb|3NIE|B Chain B, Crystal Structure Of Pf11_0147
Length = 429
Score = 31.2 bits (69), Expect = 1.00, Method: Compositional matrix adjust.
Identities = 47/222 (21%), Positives = 94/222 (42%), Gaps = 49/222 (22%)
Query: 97 LGEGGFGPVYKGVLKKGDE-IAVKRLPGRSGQGLREMKN---EASVIAKVQHKNLVRLLG 152
+G G +G VY K ++ +A+K++ R + L + K E +++ +++ ++RL
Sbjct: 36 IGRGSYGYVYLAYDKNANKNVAIKKV-NRMFEDLIDCKRILREITILNRLKSDYIIRLHD 94
Query: 153 CCIDKD----EKILIYEYMPNKSLD------FFLFDPTKRMLL----------DWSANYS 192
I +D +++ I + + L FL + + +L S
Sbjct: 95 LIIPEDLLKFDELYIVLEIADSDLKKLFKTPIFLTEQHVKTILYNLLLGEKFIHESGIIH 154
Query: 193 SRLKVSNILLDKDINPKISDFGMARICGGNE-----------------------LQANTS 229
LK +N LL++D + KI DFG+AR ++ L+ +
Sbjct: 155 RDLKPANCLLNQDCSVKICDFGLARTINSDKDIHIVNDLEEKEENEEPGPHNKNLKKQLT 214
Query: 230 RIVGTYGYMSPEYA-IQGIFSIKSDVFSFGVLLLEIVSGKKT 270
V T Y +PE +Q ++ D++S G + E+++ K+
Sbjct: 215 SHVVTRWYRAPELILLQENYTNSIDIWSTGCIFAELLNMMKS 256
>pdb|3R1N|A Chain A, Mk3 Kinase Bound To Compound 5b
pdb|3SHE|A Chain A, Novel Atp-Competitive Mk2 Inhibitors With Potent
Biochemical And Cell- Based Activity Throughout The
Series
Length = 317
Score = 31.2 bits (69), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 25/84 (29%), Positives = 41/84 (48%), Gaps = 8/84 (9%)
Query: 188 SANYSSR-LKVSNILL---DKDINPKISDFGMARICGGNELQANTSRIVGTYGYMSPEYA 243
S N + R +K N+L +KD K++DFG A+ N LQ T Y++PE
Sbjct: 127 SHNIAHRDVKPENLLYTSKEKDAVLKLTDFGFAKETTQNALQTPCY----TPYYVAPEVL 182
Query: 244 IQGIFSIKSDVFSFGVLLLEIVSG 267
+ D++S GV++ ++ G
Sbjct: 183 GPEKYDKSCDMWSLGVIMYILLCG 206
>pdb|2VAG|A Chain A, Crystal Structure Of Di-Phosphorylated Human Clk1 In
Complex With A Novel Substituted Indole Inhibitor
Length = 339
Score = 31.2 bits (69), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 53/225 (23%), Positives = 84/225 (37%), Gaps = 56/225 (24%)
Query: 90 KFSDANKLGEGGFGPVYKGVLKK--GDEIAVKRLPGRSGQGLREMKNEASVIAKVQHKN- 146
++ + LGEG FG V + + K G +AVK + R + S I ++H N
Sbjct: 15 RYEIVDTLGEGAFGKVVECIDHKAGGRHVAVKIVKNVD----RYCEAARSEIQVLEHLNT 70
Query: 147 --------LVRLLGCCIDKDEKILIYEYMPNKSLDF--------FLFDPTKRMLLDW--S 188
V++L +++E + + DF F D ++M S
Sbjct: 71 TDPNSTFRCVQMLEWFEHHGHICIVFELLGLSTYDFIKENGFLPFRLDHIRKMAYQICKS 130
Query: 189 ANY-------SSRLKVSNILLDKD-----------------INP--KISDFGMARICGGN 222
N+ + LK NIL + INP K+ DFG A
Sbjct: 131 VNFLHSNKLTHTDLKPENILFVQSDYTEAYNPKIKRDERTLINPDIKVVDFGSA-----T 185
Query: 223 ELQANTSRIVGTYGYMSPEYAIQGIFSIKSDVFSFGVLLLEIVSG 267
+ S +V Y +PE + +S DV+S G +L+E G
Sbjct: 186 YDDEHHSTLVXXRHYRAPEVILALGWSQPCDVWSIGCILIEYYLG 230
>pdb|3FHR|A Chain A, High Resolution Crystal Structure Of Mitogen-Activated
Protein Kinase-Activated Protein Kinase 3
(Mk3)-Inhibitor Complex
pdb|3FXW|A Chain A, High Resolution Crystal Structure Of Mitogen-Activated
Protein Kinase- Activated Protein Kinase 3INHIBITOR 2
COMPLEX
Length = 336
Score = 30.8 bits (68), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 25/84 (29%), Positives = 41/84 (48%), Gaps = 8/84 (9%)
Query: 188 SANYSSR-LKVSNILL---DKDINPKISDFGMARICGGNELQANTSRIVGTYGYMSPEYA 243
S N + R +K N+L +KD K++DFG A+ N LQ T Y++PE
Sbjct: 146 SHNIAHRDVKPENLLYTSKEKDAVLKLTDFGFAKETTQNALQTPCY----TPYYVAPEVL 201
Query: 244 IQGIFSIKSDVFSFGVLLLEIVSG 267
+ D++S GV++ ++ G
Sbjct: 202 GPEKYDKSCDMWSLGVIMYILLCG 225
>pdb|4HNI|A Chain A, Crystal Structure Of Ck1e In Complex With Pf4800567
pdb|4HNI|B Chain B, Crystal Structure Of Ck1e In Complex With Pf4800567
pdb|4HOK|A Chain A, Crystal Structure Of Apo Ck1e
pdb|4HOK|C Chain C, Crystal Structure Of Apo Ck1e
pdb|4HOK|E Chain E, Crystal Structure Of Apo Ck1e
pdb|4HOK|G Chain G, Crystal Structure Of Apo Ck1e
pdb|4HOK|I Chain I, Crystal Structure Of Apo Ck1e
pdb|4HOK|K Chain K, Crystal Structure Of Apo Ck1e
pdb|4HOK|M Chain M, Crystal Structure Of Apo Ck1e
pdb|4HOK|O Chain O, Crystal Structure Of Apo Ck1e
pdb|4HOK|Q Chain Q, Crystal Structure Of Apo Ck1e
pdb|4HOK|S Chain S, Crystal Structure Of Apo Ck1e
pdb|4HOK|U Chain U, Crystal Structure Of Apo Ck1e
pdb|4HOK|W Chain W, Crystal Structure Of Apo Ck1e
Length = 296
Score = 30.0 bits (66), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 13/32 (40%), Positives = 20/32 (62%), Gaps = 1/32 (3%)
Query: 89 NKFSDANKLGEGGFGPVYKGV-LKKGDEIAVK 119
NK+ K+G G FG +Y G + G+E+A+K
Sbjct: 9 NKYRLGRKIGSGSFGDIYLGANIASGEEVAIK 40
>pdb|3SV0|A Chain A, Crystal Structure Of Casein Kinase-1 Like Protein In Plant
Length = 483
Score = 29.3 bits (64), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 13/32 (40%), Positives = 20/32 (62%), Gaps = 1/32 (3%)
Query: 89 NKFSDANKLGEGGFGPVYKGV-LKKGDEIAVK 119
NKF K+G G FG +Y G ++ +E+A+K
Sbjct: 7 NKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIK 38
>pdb|4FN5|A Chain A, Elongation Factor G 1 (Pseudomonas Aeruginosa) In Complex
With Argyrin B
Length = 709
Score = 29.3 bits (64), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 31/110 (28%), Positives = 48/110 (43%), Gaps = 20/110 (18%)
Query: 70 KKEVDQLPLFSFSSVSTATNKFSDANKLGEGGFGPVYKGVLKKGDEI--AVKRLPGRSGQ 127
++ D FS + AT+ F +G F VY GVL GD + +VK R G+
Sbjct: 311 ERHADDNEPFSSLAFKIATDPF-----VGTLTFARVYSGVLSSGDSVLNSVKGKKERVGR 365
Query: 128 GLREMKNEASVIAKVQHKNLVRLLG----------CCIDKDEKILIYEYM 167
++ N+ I +V+ ++ L+G C I EK +I E M
Sbjct: 366 MVQMHANQREEIKEVRAGDIAALIGMKDVTTGDTLCSI---EKPIILERM 412
>pdb|2FN6|A Chain A, Helicobacter Pylori Psec, Aminotransferase Involved In The
Biosynthesis Of Pseudoaminic Acid
pdb|2FN6|B Chain B, Helicobacter Pylori Psec, Aminotransferase Involved In The
Biosynthesis Of Pseudoaminic Acid
pdb|2FNI|A Chain A, Psec Aminotransferase Involved In Pseudoaminic Acid
Biosynthesis
pdb|2FNI|B Chain B, Psec Aminotransferase Involved In Pseudoaminic Acid
Biosynthesis
pdb|2FNU|A Chain A, Psec Aminotransferase With External Aldimine
pdb|2FNU|B Chain B, Psec Aminotransferase With External Aldimine
Length = 375
Score = 29.3 bits (64), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 14/40 (35%), Positives = 25/40 (62%), Gaps = 2/40 (5%)
Query: 84 VSTATNKFSDANKLGEGGFGPVYKGVLKKG--DEIAVKRL 121
++T + + AN L E G+ PV+ G+ G DE+A+++L
Sbjct: 78 ITTPISFVATANMLLESGYTPVFAGIKNDGNIDELALEKL 117
>pdb|1CKJ|A Chain A, Casein Kinase I Delta Truncation Mutant Containing
Residues 1-317 Complex With Bound Tungstate
pdb|1CKJ|B Chain B, Casein Kinase I Delta Truncation Mutant Containing
Residues 1-317 Complex With Bound Tungstate
pdb|1CKI|A Chain A, Recombinant Casein Kinase I Delta Truncation Mutant
Containing Residues 1-317
pdb|1CKI|B Chain B, Recombinant Casein Kinase I Delta Truncation Mutant
Containing Residues 1-317
Length = 317
Score = 29.3 bits (64), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 12/32 (37%), Positives = 20/32 (62%), Gaps = 1/32 (3%)
Query: 89 NKFSDANKLGEGGFGPVYKGV-LKKGDEIAVK 119
N++ K+G G FG +Y G + G+E+A+K
Sbjct: 7 NRYRLGRKIGSGSFGDIYLGTDIAAGEEVAIK 38
>pdb|3UYS|A Chain A, Crystal Structure Of Apo Human Ck1d
pdb|3UYS|B Chain B, Crystal Structure Of Apo Human Ck1d
pdb|3UYS|C Chain C, Crystal Structure Of Apo Human Ck1d
pdb|3UYS|D Chain D, Crystal Structure Of Apo Human Ck1d
pdb|3UYT|A Chain A, Crystal Structure Of Ck1d With Pf670462 From P1 Crystal
Form
pdb|3UYT|B Chain B, Crystal Structure Of Ck1d With Pf670462 From P1 Crystal
Form
pdb|3UYT|C Chain C, Crystal Structure Of Ck1d With Pf670462 From P1 Crystal
Form
pdb|3UYT|D Chain D, Crystal Structure Of Ck1d With Pf670462 From P1 Crystal
Form
pdb|3UZP|A Chain A, Crystal Structure Of Ck1d With Pf670462 From P21 Crystal
Form
pdb|3UZP|B Chain B, Crystal Structure Of Ck1d With Pf670462 From P21 Crystal
Form
pdb|4HNF|A Chain A, Crystal Structure Of Ck1d In Complex With Pf4800567
pdb|4HNF|B Chain B, Crystal Structure Of Ck1d In Complex With Pf4800567
pdb|4HGT|A Chain A, Crystal Structure Of Ck1d With Compound 13
pdb|4HGT|B Chain B, Crystal Structure Of Ck1d With Compound 13
Length = 296
Score = 28.9 bits (63), Expect = 4.7, Method: Compositional matrix adjust.
Identities = 12/32 (37%), Positives = 20/32 (62%), Gaps = 1/32 (3%)
Query: 89 NKFSDANKLGEGGFGPVYKGV-LKKGDEIAVK 119
N++ K+G G FG +Y G + G+E+A+K
Sbjct: 9 NRYRLGRKIGSGSFGDIYLGTDIAAGEEVAIK 40
>pdb|1EPW|A Chain A, Crystal Structure Of Clostridium Neurotoxin Type B
pdb|1F31|A Chain A, Crystal Structure Of Clostridium Botulinum Neurotoxin B
Complexed With A Trisaccharide
pdb|1I1E|A Chain A, Crystal Structure Of Clostridium Botulinum Neurotoxin B
Complexed With Doxorubicin
pdb|1G9A|A Chain A, Crystal Structure Of Clostridium Botulinum Neurotoxin B
Complexed With An Inhibitor (Experiment 3)
pdb|1G9B|A Chain A, Crystal Structure Of Clostridium Botulinum Neurotoxin B
Complexed With An Inhibitor (Experiment 1)
pdb|1G9C|A Chain A, Crystal Structure Of Clostridium Botulinum Neurotoxin B
Complexed With An Inhibitor (Experiment 4)
pdb|1G9D|A Chain A, Crystal Structure Of Clostridium Botulinum Neurotoxin B
Complexed With An Inhibitor (Experiment 2)
pdb|1S0B|A Chain A, Crystal Structure Of Botulinum Neurotoxin Type B At Ph 4.0
pdb|1S0C|A Chain A, Crystal Structure Of Botulinum Neurotoxin Type B At Ph 5.0
pdb|1S0D|A Chain A, Crystal Structure Of Botulinum Neurotoxin Type B At Ph 5.5
pdb|1S0E|A Chain A, Crystal Structure Of Botulinum Neurotoxin Type B At Ph 6.0
pdb|1S0F|A Chain A, Crystal Structure Of Botulinum Neurotoxin Type B At Ph 7.0
pdb|1S0G|A Chain A, Crystal Structure Of Botulinum Neurotoxin Type B Apo Form
pdb|2NP0|A Chain A, Crystal Structure Of The Botulinum Neurotoxin Type B
Complexed With Synaptotagamin-Ii Ectodomain
Length = 1290
Score = 28.1 bits (61), Expect = 8.0, Method: Compositional matrix adjust.
Identities = 31/136 (22%), Positives = 57/136 (41%), Gaps = 19/136 (13%)
Query: 127 QGLREMKNEASVIAKVQHKNLVRLLGCCIDKDEKILIYEYMPNKSLDFFLFDPTKRMLLD 186
Q E+ E + K+Q V+ G CID D + L + N D +R+ +
Sbjct: 418 QAYEEISKEHLAVYKIQMCKSVKAPGICIDVDNEDLFFIADKNSFSD--DLSKNERIEYN 475
Query: 187 WSANY-SSRLKVSNILLDKDINPKISDFGMARICGGNELQANTSRIVGTYGYMSPEY--- 242
+NY + ++ ++LD D+ KI EL + + + + P Y
Sbjct: 476 TQSNYIENDFPINELILDTDLISKI------------ELPSENTESLTDFNVDVPVYEKQ 523
Query: 243 -AIQGIFSIKSDVFSF 257
AI+ IF+ ++ +F +
Sbjct: 524 PAIKKIFTDENTIFQY 539
>pdb|2VD5|A Chain A, Structure Of Human Myotonic Dystrophy Protein Kinase In
Complex With The Bisindoylmaleide Inhibitor Bim Viii
pdb|2VD5|B Chain B, Structure Of Human Myotonic Dystrophy Protein Kinase In
Complex With The Bisindoylmaleide Inhibitor Bim Viii
Length = 412
Score = 28.1 bits (61), Expect = 9.6, Method: Compositional matrix adjust.
Identities = 29/92 (31%), Positives = 46/92 (50%), Gaps = 20/92 (21%)
Query: 195 LKVSNILLDKDINPKISDFGMARICGGNELQAN-TSR---IVGTYGYMSPEYAIQGIFSI 250
+K NILLD+ + +++DFG +L+A+ T R VGT Y+SPE +Q +
Sbjct: 188 IKPDNILLDRCGHIRLADFGSCL-----KLRADGTVRSLVAVGTPDYLSPE-ILQAVGGG 241
Query: 251 --------KSDVFSFGVLLLEIVSGKKTTGFY 274
+ D ++ GV E+ G+ T FY
Sbjct: 242 PGTGSYGPECDWWALGVFAYEMFYGQ--TPFY 271
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.317 0.135 0.386
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 10,582,708
Number of Sequences: 62578
Number of extensions: 436386
Number of successful extensions: 3271
Number of sequences better than 100.0: 987
Number of HSP's better than 100.0 without gapping: 584
Number of HSP's successfully gapped in prelim test: 403
Number of HSP's that attempted gapping in prelim test: 1268
Number of HSP's gapped (non-prelim): 1243
length of query: 387
length of database: 14,973,337
effective HSP length: 101
effective length of query: 286
effective length of database: 8,652,959
effective search space: 2474746274
effective search space used: 2474746274
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 52 (24.6 bits)