BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 041767
(341 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|O49279|SKI15_ARATH SKP1-interacting partner 15 OS=Arabidopsis thaliana GN=SKIP15 PE=1
SV=1
Length = 374
Score = 473 bits (1216), Expect = e-132, Method: Compositional matrix adjust.
Identities = 241/353 (68%), Positives = 289/353 (81%), Gaps = 17/353 (4%)
Query: 1 MICRSVCKLFNQILTSSSFIHLISTQKPPLSLLALRPPHHQR--------HVSHSAAALH 52
MICRSVCK FNQ+LTS FI +IST +PPL+LLALRPPHH H ++ +H
Sbjct: 27 MICRSVCKFFNQLLTSQCFIEIIST-RPPLNLLALRPPHHHHSHRHSGNGHATNIRPYIH 85
Query: 53 VYDPNQNQWLRFDLSFLPFRSLHPVASSPGLIYLWGDLPDSPESNKSLIACNPLTRLYRV 112
VYDP QNQW RF+L FLPFRS PVASS GLIYLWGD D ES+KSL+ACNPLTR ++V
Sbjct: 86 VYDPEQNQWFRFNLDFLPFRSPQPVASSSGLIYLWGDSIDLAESSKSLVACNPLTRQFKV 145
Query: 113 LPQLGSAWSKHGSVLVDSLNKVMVLTELAALFFSNS---NHWLKFSSNLPSKPRSPILML 169
LPQLGSAWS+HG+VLVDS+N+VMVLTELAAL++S + N WLKFSSNLPSKPRSP+LM
Sbjct: 146 LPQLGSAWSRHGTVLVDSVNRVMVLTELAALYYSGTVVANQWLKFSSNLPSKPRSPVLMS 205
Query: 170 NSVYALCDVGSPWRSQWKLFCCNLSSLTNSQQFWHCLERREWGDVFDILKRPRLVRGVGN 229
+SV+ALCDVGSPWRSQWKLF C L++LT + W CLE+ EWGD+FDI+KRPRL+RG G+
Sbjct: 206 SSVFALCDVGSPWRSQWKLFSCKLTNLTITHTNWVCLEKHEWGDIFDIIKRPRLLRGNGD 265
Query: 230 -RILMIGGLKSSFTLNASCSTILILRLDLDLLEWEEAGRMPVEMYRCFSESSKFKVFGMG 288
++LMIGGLKS+F+LN +CSTILILRLDL+ LEWEEAGRMP+EMYR F ESSKFKVFG G
Sbjct: 266 SKLLMIGGLKSTFSLNPACSTILILRLDLESLEWEEAGRMPLEMYRGFQESSKFKVFGGG 325
Query: 289 DKVCFSAKRVGRLALWECEKGGGGEWRWIDGLPGIGDGPCRGFVYEASLNALP 341
D+V FSAKR+G+LA+W+C +G WRWI+G+PG DG CRGFV++A L +P
Sbjct: 326 DRVYFSAKRMGKLAMWDCWQG----WRWIEGVPGYADGLCRGFVFDAKLTLMP 374
>sp|Q9LFV5|FK111_ARATH F-box/kelch-repeat protein At5g15710 OS=Arabidopsis thaliana
GN=At5g15710 PE=2 SV=1
Length = 448
Score = 61.2 bits (147), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 79/331 (23%), Positives = 135/331 (40%), Gaps = 47/331 (14%)
Query: 4 RSVCKLFNQILTSSSFIHL---ISTQKPPLSLLALRPPHHQRHVSHSAAALHVYDPNQNQ 60
RSVCK +N IL +SF+ +S+ P L P V+
Sbjct: 128 RSVCKKWNLILQDNSFLKFHSNVSSHGPCLLTFWKNSPQ--------IPQCSVFSLPLKT 179
Query: 61 WLRFDLSFLPFRSLHPVASSPGLIYLWGDLPDSPESNKSLIACNPLTRLYRVLPQLGSAW 120
W + +FLP + V SS GL+ G + ++L+ CNPL + +R LP +
Sbjct: 180 WYKIPFTFLPPWAFWLVGSSGGLVCFSG---LDGLTFRTLV-CNPLMQSWRTLPSMHYNQ 235
Query: 121 SKHGSVLVDSLNKVMVLTELAALFFSNSNHWLKFSSNLPSKPRSPIL----MLNSVYALC 176
+ ++VD +K + + ++ S + S I+ + +S A C
Sbjct: 236 QRQLIMVVDRSDKSFKVIATSDIYGDKSLPTEVYDSKTDKWSLHQIMPAVNLCSSKMAYC 295
Query: 177 DVGSPWRSQWKLFCCNLSSLTNSQQFWHCLERREWGDVFDILKRPR------LVRGVGNR 230
D +L+ LS L + L+ +W + K PR LV G R
Sbjct: 296 DS--------RLYLETLSPLG---LMMYRLDSGQWEHI--PAKFPRSLLDGYLVAGTQKR 342
Query: 231 ILMIGGLKSSFTLNASCSTILILRLDLDLLEWEEAGRMPVEMYRCFSE--SSKFKVFGMG 288
+ ++G + L ++ ++ I LD + W E RMP + +R + +F+ FG
Sbjct: 343 LFLVGRIG----LYSTLQSMRIWELDHTKVSWVEISRMPPKYFRALLRLSAERFECFGQD 398
Query: 289 DKVCFSAKRVGRLALWECEKGGGGEWRWIDG 319
+ +CF++ G+ L+ +K W WI G
Sbjct: 399 NLICFTSWNQGKGLLYNVDK---KIWSWISG 426
>sp|Q39090|UFO_ARATH Protein UNUSUAL FLORAL ORGANS OS=Arabidopsis thaliana GN=UFO PE=1
SV=2
Length = 442
Score = 40.8 bits (94), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 76/319 (23%), Positives = 122/319 (38%), Gaps = 66/319 (20%)
Query: 4 RSVCKLFNQILTSSSFIHLISTQKPPLSLLALRPP-----HHQRHVSH------------ 46
R VCK F +L S++F+ L LL LR H+ S+
Sbjct: 71 RCVCKRFYSLLFSNTFLETY------LQLLPLRHNCFLFFKHKTLKSYIYKRGGTNDDDS 124
Query: 47 SAAALHVYDPNQNQWLRFDLSFLPFRSLHPVASSPGLIYLWGDLPDSPESN-KSLIACNP 105
+ A ++DPN+ +W R +++P +P SS GL+ W S E+ K+++ CNP
Sbjct: 125 NKAEGFLFDPNEIRWYRLSFAYIP-SGFYPSGSSGGLVS-W----VSEEAGLKTILLCNP 178
Query: 106 LTRLY---------RVLPQLG---SAWSKHGSVLVDSLNKVMVLTELAAL-FFSNSNHWL 152
L R+ P +G + S +V D L + L++ F ++ +
Sbjct: 179 LVGSVSQLPPISRPRLFPSIGLSVTPTSIDVTVAGDDLISPYAVKNLSSESFHVDAGGFF 238
Query: 153 KFSSNLPSKPRSPILMLNSVYALCDV--GSPWRSQWKLFCCNLSSLTNSQQFWHCLERRE 210
+ S PR LC + G Q K +C N S + + +
Sbjct: 239 SLWAMTSSLPR-----------LCSLESGKMVYVQGKFYCMNYSPFS---VLSYEVTGNR 284
Query: 211 WGDVFDILKR----PRLVRGVGNRILMIGGLKSSFTLNASCSTILILRLDLDLLEWEEAG 266
W + ++R P L+ G IL+ KS + S + + L D W E
Sbjct: 285 WIKIQAPMRRFLRSPSLLESKGRLILVAAVEKSKLNVPKS---LRLWSLQQDNATWVEIE 341
Query: 267 RMPVEMYRCFSESSKFKVF 285
RMP +Y F+ K F
Sbjct: 342 RMPQPLYTQFAAEEGGKGF 360
>sp|Q9FK54|FB260_ARATH F-box protein At5g18160 OS=Arabidopsis thaliana GN=At5g18160 PE=2
SV=1
Length = 379
Score = 36.2 bits (82), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 38/122 (31%), Positives = 48/122 (39%), Gaps = 32/122 (26%)
Query: 4 RSVCKLFNQILTSSSFI-HLISTQKPPLSLLALRP---------PHHQRHVSHSAAALHV 53
RSV KL++ I T+ FI H PP LL R P HQ SH H+
Sbjct: 55 RSVSKLWSSITTTPEFIKHRSKKTSPPCVLLIFRKHDKLIVFSSPQHQNTYSH-VQDYHI 113
Query: 54 YDPNQNQWLRFDLSFLPFRSLHPVASSPGLIYLWGDLPDSPESNKSLIACNPLTRLYRVL 113
P R D S+H GLI L E +K L+ CNP + + L
Sbjct: 114 EIPKNGFIRRLD-------SVH------GLICL--------EGSKQLVICNPTLKRFFPL 152
Query: 114 PQ 115
P+
Sbjct: 153 PE 154
>sp|Q9FII1|FK118_ARATH F-box/kelch-repeat protein At5g42360 OS=Arabidopsis thaliana
GN=At5g42360 PE=2 SV=1
Length = 563
Score = 36.2 bits (82), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 30/122 (24%), Positives = 55/122 (45%), Gaps = 12/122 (9%)
Query: 6 VCKLFNQILTSSSFIHLI---STQKPPLSLLALRPPHHQRHVSHSAAALHVYDPNQNQWL 62
VCK + + + F+ + S Q P L L A S+ +H YD +Q++W
Sbjct: 158 VCKKWQSMANTQRFLQMRREGSFQTPWLFLFAALKD------GCSSGDIHGYDVSQDKWH 211
Query: 63 RFDLSFLPFRSLHPVASSPGLIYLWGDLP---DSPESNKSLIACNPLTRLYRVLPQLGSA 119
R + L R ++ V S IY+ G +S +S++ ++ +P + +R + + A
Sbjct: 212 RIETDLLKGRFMYSVTSIHEEIYIVGGRSMDRNSFKSHRGILVFSPSIKAWRKIASMRHA 271
Query: 120 WS 121
S
Sbjct: 272 RS 273
>sp|Q9FZK1|FBX6_ARATH F-box only protein 6 OS=Arabidopsis thaliana GN=FBX6 PE=2 SV=1
Length = 467
Score = 36.2 bits (82), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 44/175 (25%), Positives = 76/175 (43%), Gaps = 24/175 (13%)
Query: 4 RSVCKLFNQILTSSSFIHLISTQKPPLSLLALRPPHHQRHVSHSAAALHVYDPNQNQWLR 63
R+VC+ +N ++ S SF + L P + + VYDP+ +W
Sbjct: 141 RAVCRKWNALIDSDSFSRCFTE-------LPQTIPWFYTITHENVNSGQVYDPSLKKWHH 193
Query: 64 FDLSFLPFRSLH-PVASSPGLIYLWGDLPDSPESNKSLIACNPLTRLYRVLPQLG-SAWS 121
+ LP +S+ P+AS+ GL+ D+ +++ NPLT+ +R LP WS
Sbjct: 194 PIIPALPKKSIVLPMASAGGLVCFL-DI-----GHRNFYVSNPLTKSFRELPARSFKVWS 247
Query: 122 K-------HGSVLVDSLNKVMVLTE-LAALFFSNSNHWLKFSSNLPSKPRSPILM 168
+ +G+ + V E ++ S SN W K +PS + P+L+
Sbjct: 248 RVAVGMTLNGNSTSHGYKVLWVGCEGEYEVYDSLSNVWTK-RGTIPSNIKLPVLL 301
>sp|Q9FII2|FK117_ARATH F-box/kelch-repeat protein At5g42350 OS=Arabidopsis thaliana
GN=At5g42350 PE=2 SV=1
Length = 563
Score = 36.2 bits (82), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 30/122 (24%), Positives = 55/122 (45%), Gaps = 12/122 (9%)
Query: 6 VCKLFNQILTSSSFIHLI---STQKPPLSLLALRPPHHQRHVSHSAAALHVYDPNQNQWL 62
VCK + + + F+ + S Q P L L A S+ +H YD +Q++W
Sbjct: 158 VCKKWQSMANTQRFLQMRREGSFQTPWLFLFAALKD------GCSSGDIHGYDVSQDKWH 211
Query: 63 RFDLSFLPFRSLHPVASSPGLIYLWGDLP---DSPESNKSLIACNPLTRLYRVLPQLGSA 119
R + L R ++ V S IY+ G +S +S++ ++ +P + +R + + A
Sbjct: 212 RIETDLLKGRFMYSVTSIHEEIYIVGGRSMDRNSFKSHRGILVFSPSIKAWRKIASMRHA 271
Query: 120 WS 121
S
Sbjct: 272 RS 273
>sp|Q9M310|FBK77_ARATH F-box/kelch-repeat protein At3g61590 OS=Arabidopsis thaliana
GN=At3g61590 PE=1 SV=1
Length = 411
Score = 35.8 bits (81), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 34/130 (26%), Positives = 61/130 (46%), Gaps = 12/130 (9%)
Query: 5 SVCKLFNQILTSSSFIHLISTQKPPLSLLALRPPHHQRHVSHSAAALHVYDPNQNQWLRF 64
+VCK +N+I++S F+ S ++ RP + + + + YDP +W F
Sbjct: 65 TVCKRWNEIVSSRRFLCNFSNNS-----VSQRPWYFMFTTTDDPSG-YAYDPIIRKWYSF 118
Query: 65 DLSFLPFRSLHPVASSPGLIYLWGDLPDSPESNKSLIACNPLTRLYRVLPQLGSAWSKHG 124
DL + + VASS GL+ D+ NK ++ NP+T+ +R L + S
Sbjct: 119 DLPCIETSNWF-VASSCGLVCFM----DNDCRNKIYVS-NPITKQWRTLIEPPGHKSTDY 172
Query: 125 SVLVDSLNKV 134
+ + S+N+
Sbjct: 173 TAMSTSVNRA 182
>sp|B9DRU9|ADDB_STRU0 ATP-dependent helicase/deoxyribonuclease subunit B OS=Streptococcus
uberis (strain ATCC BAA-854 / 0140J) GN=rexB PE=3 SV=1
Length = 1086
Score = 35.4 bits (80), Expect = 0.59, Method: Composition-based stats.
Identities = 23/63 (36%), Positives = 37/63 (58%), Gaps = 3/63 (4%)
Query: 21 HLISTQKPPLSLLALRPPHHQRHVSHSAAALHVYDPNQNQW-LRFDLSFLPFRSLHPVAS 79
HL +++ P +LA++ P HQ +S S++AL VY NQ ++ L++ L S+HP A
Sbjct: 728 HLATSRLSP-EVLAIKYPDHQP-LSLSSSALTVYHDNQYKYFLQYVLGLQELESIHPDAR 785
Query: 80 SPG 82
G
Sbjct: 786 HHG 788
>sp|Q1KS79|FB116_ARATH F-box protein At2g23160 OS=Arabidopsis thaliana GN=At2g23160 PE=2
SV=1
Length = 307
Score = 35.0 bits (79), Expect = 0.71, Method: Compositional matrix adjust.
Identities = 22/72 (30%), Positives = 35/72 (48%), Gaps = 5/72 (6%)
Query: 72 RSLHPVASSPGLIYLWGDLPDSPESNKSLIACNPLTRLYRVLPQLGSAWSKHGSVLVDSL 131
R + GLIYL+GD D ++S+I CNP T Y +LP L + ++ + +
Sbjct: 108 RRYFSYGYTSGLIYLYGDSSD----DRSVI-CNPYTGEYAILPYLQRYRKTYSFLVFEPI 162
Query: 132 NKVMVLTELAAL 143
K + +A L
Sbjct: 163 EKQFKILFMAYL 174
>sp|P15909|V127_FOWPN Protein FPV127 OS=Fowlpox virus (strain NVSL) GN=FPV127 PE=3 SV=2
Length = 336
Score = 33.5 bits (75), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 30/108 (27%), Positives = 49/108 (45%), Gaps = 23/108 (21%)
Query: 80 SPGLIYLWGD----LPDSPESNKSLIACNPLTRLYRVLPQLGSAWSKHGSVLVDSLNKVM 135
+P L Y W D + D + +SL C+PLT+ + GS L D++ +
Sbjct: 85 NPSLSYYWEDSKNKIFDEYATGRSLKTCDPLTK------------TISGSTLCDNILTSL 132
Query: 136 VLTELAALFFSNSNHWLKFSSNLP--SKPRSPILMLNSVYA-LCDVGS 180
L E + + + N W+ ++ N P S P+S +N Y LC G+
Sbjct: 133 CLDEKSGVDRTMCNEWMGYALNRPDLSIPKS----INDRYTKLCSKGA 176
>sp|Q75BY9|ATG5_ASHGO Autophagy protein 5 OS=Ashbya gossypii (strain ATCC 10895 / CBS
109.51 / FGSC 9923 / NRRL Y-1056) GN=ATG5 PE=3 SV=2
Length = 293
Score = 33.5 bits (75), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 36/144 (25%), Positives = 57/144 (39%), Gaps = 22/144 (15%)
Query: 120 WSKHGSVLVDSLNKVMVLTELAALFFSNSNHWLKFSSNLPSKPRSPILMLNSVYALCDVG 179
W+ L DSL + E AA F +N+ + N R + L V + V
Sbjct: 85 WNHPVGTLYDSLVGLRP-QERAAQFQANTLTMWTLTLNYSEDARDGSVPL--VGGMQQVE 141
Query: 180 SPWRSQWKLFCCNLS---------SLTNSQQFWHCLERREWGDVFDILKRPRLVRGVGNR 230
WR QWK C + S+ +S+ FW C+ +R+ R+ RG+ +R
Sbjct: 142 DFWRHQWKQACYIIHGSSKQIMSLSIPDSKTFWDCVLQRD----------ERVFRGIASR 191
Query: 231 ILMIGGLKSSFTLNASCSTILILR 254
I G + + +T+ LR
Sbjct: 192 ITARKGGVKALPVRIHQTTLRELR 215
>sp|Q6TFL4|KLH24_HUMAN Kelch-like protein 24 OS=Homo sapiens GN=KLHL24 PE=2 SV=1
Length = 600
Score = 33.5 bits (75), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 18/84 (21%), Positives = 40/84 (47%), Gaps = 1/84 (1%)
Query: 50 ALHVYDPNQNQWLRFDLSFLPFRSLHPVASSPGLIYLWGDLPDSPESNKSLIACNPLTRL 109
A++ YDP ++ W+ +F + ++ G IY+ G ++ E+ +++ +P T +
Sbjct: 513 AIYCYDPVEDYWMHVQNTFSRQENC-GMSVCNGKIYILGGRRENGEATDTILCYDPATSI 571
Query: 110 YRVLPQLGSAWSKHGSVLVDSLNK 133
+ + S HG V + N+
Sbjct: 572 ITGVAAMPRPVSYHGCVTIHRYNE 595
>sp|Q08DS0|KLH21_BOVIN Kelch-like protein 21 OS=Bos taurus GN=KLHL21 PE=2 SV=1
Length = 597
Score = 32.3 bits (72), Expect = 5.8, Method: Compositional matrix adjust.
Identities = 29/122 (23%), Positives = 51/122 (41%), Gaps = 3/122 (2%)
Query: 44 VSHSAAALHVYDPNQNQWLRFDLSFLPFRSLHPVASSPGLIYLWGDLPDSPESNKSLIAC 103
+ +A + VY+P +N+W + S +A G +Y+ G ++ E + + A
Sbjct: 475 IRDDSAEVDVYNPTKNEWDKIP-SMNQVHVGGSLAVLGGKLYVSGGYDNTFELSDVVEAY 533
Query: 104 NPLTRLYRVLPQLGSAWSKHGSVLVDSLNKVMVLTELAALFFSNSNHWLKFSSNLPSKPR 163
+P TR + V+ +L HGSV + + M T L F P P+
Sbjct: 534 DPETRAWSVVGRLPEPTFWHGSVSI--FRQFMPQTPLGGRGFELDGGSSDMDVGQPRPPQ 591
Query: 164 SP 165
+P
Sbjct: 592 NP 593
>sp|Q8QMQ2|KBTB1_CWPXB Kelch repeat and BTB domain-containing protein 1 OS=Cowpox virus
(strain Brighton Red) GN=KBTB1 PE=3 SV=1
Length = 563
Score = 31.6 bits (70), Expect = 9.5, Method: Compositional matrix adjust.
Identities = 25/87 (28%), Positives = 39/87 (44%), Gaps = 5/87 (5%)
Query: 45 SHSAAALHVYDPNQNQWLRFDLSFLPFRSLHPVASSPGLIYLWGDLPDSPESNKSLIACN 104
SH +++ Y+ +N W +S +R VA +IY+ G SP + +IA N
Sbjct: 262 SHDKISINCYNRKKNTWEM--ISSRRYRCSFAVAVLDNIIYMMGGYDQSPYRSSKVIAYN 319
Query: 105 PLTR--LYRVLPQLGSAWSKHGSVLVD 129
T +Y + P+L S G V D
Sbjct: 320 TCTNSWIYDI-PELKYPRSNCGGVADD 345
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.324 0.138 0.455
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 132,454,891
Number of Sequences: 539616
Number of extensions: 5468688
Number of successful extensions: 11128
Number of sequences better than 100.0: 19
Number of HSP's better than 100.0 without gapping: 1
Number of HSP's successfully gapped in prelim test: 18
Number of HSP's that attempted gapping in prelim test: 11110
Number of HSP's gapped (non-prelim): 22
length of query: 341
length of database: 191,569,459
effective HSP length: 118
effective length of query: 223
effective length of database: 127,894,771
effective search space: 28520533933
effective search space used: 28520533933
T: 11
A: 40
X1: 15 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (22.0 bits)
S2: 61 (28.1 bits)