Query 041767
Match_columns 341
No_of_seqs 149 out of 1810
Neff 9.8
Searched_HMMs 29240
Date Mon Mar 25 17:52:06 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/041767.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/041767hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3ii7_A Kelch-like protein 7; p 100.0 2.3E-26 7.9E-31 205.1 26.1 241 48-323 23-284 (306)
2 1zgk_A Kelch-like ECH-associat 99.9 2.5E-26 8.4E-31 205.2 22.1 240 48-323 38-299 (308)
3 2xn4_A Kelch-like protein 2; s 99.9 8.2E-26 2.8E-30 201.1 25.4 240 48-322 29-288 (302)
4 4asc_A Kelch repeat and BTB do 99.9 3.1E-25 1.1E-29 198.7 24.7 240 49-323 13-289 (315)
5 2vpj_A Kelch-like protein 12; 99.9 1.7E-25 5.9E-30 198.9 21.5 238 48-322 30-289 (301)
6 2woz_A Kelch repeat and BTB do 99.9 2.8E-24 9.6E-29 192.7 26.1 234 49-317 24-293 (318)
7 2uvk_A YJHT; unknown function, 99.9 2.1E-22 7.2E-27 183.3 21.1 246 49-322 31-353 (357)
8 3ii7_A Kelch-like protein 7; p 99.9 3.7E-21 1.3E-25 171.3 21.2 199 48-272 69-285 (306)
9 2xn4_A Kelch-like protein 2; s 99.9 1.5E-21 5.3E-26 173.4 18.7 198 48-272 76-290 (302)
10 1zgk_A Kelch-like ECH-associat 99.9 2.2E-21 7.5E-26 173.1 19.6 198 48-272 89-300 (308)
11 2uvk_A YJHT; unknown function, 99.9 2E-21 6.8E-26 176.8 18.3 224 76-322 14-305 (357)
12 2vpj_A Kelch-like protein 12; 99.9 9E-21 3.1E-25 168.3 21.0 198 48-272 77-291 (301)
13 4asc_A Kelch repeat and BTB do 99.9 8.8E-21 3E-25 169.6 20.4 201 49-269 67-287 (315)
14 2woz_A Kelch repeat and BTB do 99.9 3.7E-21 1.3E-25 172.3 15.9 201 50-272 79-298 (318)
15 1k3i_A Galactose oxidase precu 99.8 2.4E-19 8.3E-24 176.0 20.9 248 49-322 219-508 (656)
16 2zwa_A Leucine carboxyl methyl 99.8 5.5E-18 1.9E-22 167.0 21.1 211 72-318 388-642 (695)
17 2zwa_A Leucine carboxyl methyl 99.8 2.9E-18 9.9E-23 169.0 17.0 205 48-272 411-647 (695)
18 1k3i_A Galactose oxidase precu 99.7 7.3E-17 2.5E-21 158.4 14.7 249 50-322 167-454 (656)
19 3dsm_A Uncharacterized protein 96.9 0.078 2.7E-06 46.5 18.2 250 48-335 16-276 (328)
20 3hfq_A Uncharacterized protein 96.5 0.17 5.9E-06 44.2 17.2 231 49-307 18-270 (347)
21 3dsm_A Uncharacterized protein 95.9 0.76 2.6E-05 40.0 18.9 176 97-315 16-216 (328)
22 1fs1_A SKP2 F-BOX, cyclin A/CD 95.2 0.0028 9.7E-08 39.6 -0.4 18 2-19 31-48 (53)
23 2e31_A FBS1, F-box only protei 95.0 0.0041 1.4E-07 53.8 0.1 25 2-26 74-98 (297)
24 3g4e_A Regucalcin; six bladed 94.3 2.2 7.4E-05 36.4 19.2 66 80-155 23-89 (297)
25 3nol_A Glutamine cyclotransfer 93.8 2.6 9E-05 35.5 18.1 186 77-301 48-249 (262)
26 3q7m_A Lipoprotein YFGL, BAMB; 93.4 3.8 0.00013 36.0 19.4 96 49-153 153-265 (376)
27 3q7m_A Lipoprotein YFGL, BAMB; 93.4 3.9 0.00013 35.9 18.0 69 77-153 49-129 (376)
28 3jro_A Fusion protein of prote 93.1 7 0.00024 38.3 18.9 59 97-155 30-93 (753)
29 2iwa_A Glutamine cyclotransfer 92.1 4.9 0.00017 34.0 21.8 191 77-308 26-237 (266)
30 3v9f_A Two-component system se 92.0 7.1 0.00024 38.3 17.4 212 49-307 427-655 (781)
31 3nok_A Glutaminyl cyclase; bet 91.1 6.3 0.00022 33.3 18.7 184 76-301 59-259 (268)
32 3mbr_X Glutamine cyclotransfer 90.6 6.6 0.00022 32.7 21.7 190 76-307 25-232 (243)
33 3jrp_A Fusion protein of prote 90.3 8.2 0.00028 33.2 21.5 59 97-155 32-95 (379)
34 2qc5_A Streptogramin B lactona 90.0 7.4 0.00025 32.3 22.5 95 49-153 41-138 (300)
35 1l0q_A Surface layer protein; 89.3 10 0.00035 33.0 18.2 92 49-152 12-109 (391)
36 3u4y_A Uncharacterized protein 88.9 9.9 0.00034 32.2 15.8 63 80-151 8-74 (331)
37 3u4y_A Uncharacterized protein 88.8 10 0.00034 32.2 18.9 234 49-321 62-314 (331)
38 2z2n_A Virginiamycin B lyase; 88.4 9.7 0.00033 31.5 22.0 213 49-307 36-254 (299)
39 1ri6_A Putative isomerase YBHE 88.3 11 0.00037 31.9 18.7 81 249-337 254-334 (343)
40 3bws_A Protein LP49; two-domai 88.1 14 0.00046 32.8 19.7 96 50-151 102-203 (433)
41 1ri6_A Putative isomerase YBHE 87.4 12 0.00042 31.5 17.5 61 80-147 48-114 (343)
42 1l0q_A Surface layer protein; 86.8 15 0.00051 31.9 17.1 62 82-152 2-67 (391)
43 3jrp_A Fusion protein of prote 86.1 16 0.00053 31.4 18.7 54 97-150 78-136 (379)
44 2qc5_A Streptogramin B lactona 85.2 15 0.0005 30.4 23.3 96 49-154 83-181 (300)
45 3v9f_A Two-component system se 84.0 33 0.0011 33.5 20.9 188 81-318 373-575 (781)
46 1rwi_B Serine/threonine-protei 83.8 16 0.00056 29.7 20.5 69 77-153 30-101 (270)
47 2z2n_A Virginiamycin B lyase; 83.6 17 0.0006 29.9 23.2 96 49-154 78-176 (299)
48 2aq5_A Coronin-1A; WD40 repeat 82.7 24 0.00083 30.9 16.3 66 81-152 93-167 (402)
49 3e5z_A Putative gluconolactona 82.4 20 0.0007 29.8 19.0 80 49-137 50-131 (296)
50 3mbr_X Glutamine cyclotransfer 82.3 8.5 0.00029 32.0 9.3 87 199-307 43-132 (243)
51 1n7d_A LDL receptor, low-densi 82.2 38 0.0013 32.8 16.4 64 79-150 415-486 (699)
52 3hfq_A Uncharacterized protein 81.1 25 0.00085 30.0 17.7 99 49-153 63-177 (347)
53 3vgz_A Uncharacterized protein 78.3 30 0.001 29.2 26.4 93 49-150 69-175 (353)
54 3jro_A Fusion protein of prote 77.3 53 0.0018 31.9 14.8 96 49-150 31-134 (753)
55 1rwi_B Serine/threonine-protei 75.8 30 0.001 28.0 22.1 94 49-152 46-142 (270)
56 3dwl_C Actin-related protein 2 72.4 46 0.0016 28.5 13.4 101 49-155 33-139 (377)
57 3bws_A Protein LP49; two-domai 71.4 52 0.0018 28.8 18.3 92 49-151 191-295 (433)
58 2ojh_A Uncharacterized protein 71.4 39 0.0013 27.3 16.6 59 48-115 21-80 (297)
59 3dwl_C Actin-related protein 2 71.3 48 0.0017 28.4 17.2 69 81-155 22-94 (377)
60 3g4e_A Regucalcin; six bladed 70.7 46 0.0016 27.8 17.0 78 49-137 35-114 (297)
61 1q7f_A NHL, brain tumor CG1071 70.3 44 0.0015 27.4 17.7 94 49-150 100-196 (286)
62 4a2l_A BT_4663, two-component 67.4 96 0.0033 30.2 22.4 189 81-318 367-578 (795)
63 3nol_A Glutamine cyclotransfer 66.3 27 0.00093 29.3 8.3 69 224-308 48-116 (262)
64 3m0c_C LDL receptor, low-densi 65.8 1.1E+02 0.0037 30.2 22.2 181 80-308 434-632 (791)
65 1q7f_A NHL, brain tumor CG1071 64.9 56 0.0019 26.7 21.2 65 79-149 38-110 (286)
66 1pjx_A Dfpase, DIISOPROPYLFLUO 64.4 60 0.002 26.8 15.8 57 97-154 45-106 (314)
67 2fp8_A Strictosidine synthase; 64.3 65 0.0022 27.2 19.3 227 49-307 40-312 (322)
68 1p22_A F-BOX/WD-repeat protein 62.2 83 0.0028 27.7 15.3 61 81-151 142-205 (435)
69 1gxr_A ESG1, transducin-like e 60.9 70 0.0024 26.4 19.9 51 97-150 162-216 (337)
70 3scy_A Hypothetical bacterial 60.4 79 0.0027 26.9 23.6 105 200-318 234-346 (361)
71 3mkq_A Coatomer beta'-subunit; 58.3 1.3E+02 0.0046 28.9 16.7 53 97-152 34-90 (814)
72 1npe_A Nidogen, entactin; glyc 56.8 78 0.0027 25.7 23.3 207 80-336 46-261 (267)
73 1ijq_A LDL receptor, low-densi 55.9 93 0.0032 26.3 21.5 90 50-149 11-109 (316)
74 2fp8_A Strictosidine synthase; 54.0 98 0.0033 26.0 15.4 59 97-155 39-117 (322)
75 1qks_A Cytochrome CD1 nitrite 51.1 1.6E+02 0.0054 27.6 13.5 57 81-147 166-226 (567)
76 2hes_X YDR267CP; beta-propelle 51.0 1.1E+02 0.0038 25.7 16.5 117 200-335 176-305 (330)
77 3lrv_A PRE-mRNA-splicing facto 50.1 1.2E+02 0.004 25.7 19.2 54 97-151 148-204 (343)
78 1pjx_A Dfpase, DIISOPROPYLFLUO 50.0 1.1E+02 0.0036 25.2 19.0 82 49-138 46-134 (314)
79 2p4o_A Hypothetical protein; p 49.7 1.1E+02 0.0039 25.4 19.1 69 77-155 38-111 (306)
80 1gxr_A ESG1, transducin-like e 48.5 1.1E+02 0.0039 25.1 19.7 55 97-151 118-175 (337)
81 1npe_A Nidogen, entactin; glyc 48.4 1.1E+02 0.0037 24.8 19.9 91 49-148 58-155 (267)
82 2dg1_A DRP35, lactonase; beta 48.3 1.2E+02 0.0041 25.3 18.7 67 78-152 52-125 (333)
83 2iwa_A Glutamine cyclotransfer 48.1 1.2E+02 0.0041 25.3 10.7 90 48-150 43-137 (266)
84 4a2l_A BT_4663, two-component 47.5 2.1E+02 0.007 27.8 24.0 224 50-318 236-487 (795)
85 3p5b_L Low density lipoprotein 46.3 1.6E+02 0.0053 26.0 22.6 215 50-308 93-320 (400)
86 2qe8_A Uncharacterized protein 45.3 74 0.0025 27.2 8.0 84 228-319 77-163 (343)
87 2dg1_A DRP35, lactonase; beta 44.8 1.4E+02 0.0046 24.9 11.3 102 49-154 66-177 (333)
88 1k8k_C P40, ARP2/3 complex 41 44.5 1.4E+02 0.0048 25.0 21.3 96 49-150 30-129 (372)
89 3f3f_A Nucleoporin SEH1; struc 44.1 1E+02 0.0036 25.3 8.8 80 249-336 34-121 (351)
90 3nok_A Glutaminyl cyclase; bet 43.9 41 0.0014 28.3 5.7 66 223-307 59-124 (268)
91 1jmx_B Amine dehydrogenase; ox 43.7 82 0.0028 26.3 8.1 20 288-307 54-73 (349)
92 3scy_A Hypothetical bacterial 43.7 1.5E+02 0.0051 25.1 21.1 96 49-149 29-130 (361)
93 4ggc_A P55CDC, cell division c 43.5 82 0.0028 25.8 7.9 54 97-150 44-100 (318)
94 2hes_X YDR267CP; beta-propelle 43.0 1.1E+02 0.0038 25.7 8.8 77 249-336 130-208 (330)
95 3sfz_A APAF-1, apoptotic pepti 42.0 2.8E+02 0.0096 28.3 13.0 210 76-336 967-1189(1249)
96 2xbg_A YCF48-like protein; pho 41.7 1.6E+02 0.0055 24.9 12.4 89 58-155 108-200 (327)
97 4g56_B MGC81050 protein; prote 41.6 1.7E+02 0.0057 25.0 15.0 204 81-335 105-321 (357)
98 3vl1_A 26S proteasome regulato 41.4 1.7E+02 0.0059 25.1 13.9 63 80-150 107-172 (420)
99 3mmy_A MRNA export factor; mRN 41.2 1.5E+02 0.0053 24.6 15.8 66 82-153 54-122 (368)
100 1nir_A Nitrite reductase; hemo 40.3 2.2E+02 0.0077 26.2 12.8 62 80-150 147-213 (543)
101 4gga_A P55CDC, cell division c 40.0 85 0.0029 27.5 7.8 54 97-150 124-180 (420)
102 1k8k_C P40, ARP2/3 complex 41 39.2 1.7E+02 0.0058 24.5 18.6 68 81-154 19-89 (372)
103 3ott_A Two-component system se 37.4 2.5E+02 0.0084 27.0 11.2 58 97-154 492-551 (758)
104 3v65_B Low-density lipoprotein 36.8 2.1E+02 0.0073 24.9 21.2 182 80-307 126-317 (386)
105 2ovr_B FBW7, F-BOX/WD repeat p 36.4 2.2E+02 0.0074 24.9 21.9 20 2-21 41-60 (445)
106 3fm0_A Protein CIAO1; WDR39,SG 36.1 2E+02 0.0067 24.3 16.1 116 200-336 84-205 (345)
107 2ojh_A Uncharacterized protein 36.0 1.6E+02 0.0056 23.3 19.3 56 97-155 21-79 (297)
108 3azo_A Aminopeptidase; POP fam 35.5 2.8E+02 0.0095 25.9 18.2 150 97-266 216-376 (662)
109 2ast_B S-phase kinase-associat 34.9 6.6 0.00023 33.8 -0.6 17 2-18 31-47 (336)
110 3no2_A Uncharacterized protein 34.3 1.9E+02 0.0066 23.7 15.0 191 78-316 1-202 (276)
111 3l2o_B F-box only protein 4; s 34.2 8 0.00027 33.2 -0.2 25 2-26 27-51 (312)
112 3ei3_B DNA damage-binding prot 34.0 2.2E+02 0.0074 24.2 14.3 193 76-313 79-284 (383)
113 2ad6_A Methanol dehydrogenase 33.8 2.9E+02 0.01 25.7 11.4 68 78-153 59-141 (571)
114 1jmx_B Amine dehydrogenase; ox 33.3 1E+02 0.0034 25.7 6.9 68 78-152 7-78 (349)
115 2pm7_B Protein transport prote 32.3 2.1E+02 0.0071 23.4 22.9 69 81-155 20-93 (297)
116 3q6k_A 43.2 kDa salivary prote 31.9 53 0.0018 29.2 4.8 67 250-318 123-198 (381)
117 2oiz_A Aromatic amine dehydrog 31.9 1.5E+02 0.0052 25.5 7.9 94 228-336 265-358 (361)
118 4e54_B DNA damage-binding prot 31.3 2.7E+02 0.0091 24.4 14.9 58 97-155 141-203 (435)
119 2pm7_B Protein transport prote 31.0 2.2E+02 0.0074 23.3 16.8 62 82-149 67-133 (297)
120 2vdu_B TRNA (guanine-N(7)-)-me 29.3 2.9E+02 0.0099 24.2 17.5 219 77-335 110-364 (450)
121 2hqs_A Protein TOLB; TOLB, PAL 28.8 2.9E+02 0.01 24.1 22.0 241 49-337 159-409 (415)
122 4a0p_A LRP6, LRP-6, low-densit 27.9 3.9E+02 0.013 25.2 23.5 181 79-308 46-237 (628)
123 4aez_A CDC20, WD repeat-contai 27.3 3E+02 0.01 23.6 18.2 54 97-151 112-168 (401)
124 3e5z_A Putative gluconolactona 26.5 2.1E+02 0.007 23.3 7.6 65 81-155 39-106 (296)
125 3f3f_A Nucleoporin SEH1; struc 25.5 2.7E+02 0.0093 22.6 15.8 24 294-319 323-346 (351)
126 1yfq_A Cell cycle arrest prote 25.1 2.8E+02 0.0097 22.7 17.3 50 97-148 78-131 (342)
127 2ece_A 462AA long hypothetical 25.1 2.2E+02 0.0076 25.9 7.7 27 281-307 325-351 (462)
128 3ott_A Two-component system se 24.1 3.6E+02 0.012 25.9 9.7 88 51-148 538-626 (758)
129 4e54_B DNA damage-binding prot 23.0 3.8E+02 0.013 23.3 10.0 64 80-149 175-241 (435)
130 3zwl_B Eukaryotic translation 22.5 3.3E+02 0.011 22.4 15.9 53 97-152 53-109 (369)
131 3p5b_L Low density lipoprotein 21.4 4.1E+02 0.014 23.2 10.5 89 200-307 93-189 (400)
132 4aow_A Guanine nucleotide-bind 20.8 3.4E+02 0.012 22.1 18.6 19 290-308 319-337 (340)
133 3lp9_A LS-24; SEED albumin, pl 20.6 2.7E+02 0.0092 22.4 6.8 62 79-149 70-148 (227)
134 2ghs_A AGR_C_1268P; regucalcin 20.4 2.2E+02 0.0076 23.8 6.7 64 81-154 60-124 (326)
No 1
>3ii7_A Kelch-like protein 7; protein-binding, kelch-repeat, structural genomics, structur genomics consortium, SGC, kelch repeat, nucleus, protein BI; 1.63A {Homo sapiens}
Probab=99.95 E-value=2.3e-26 Score=205.08 Aligned_cols=241 Identities=15% Similarity=0.182 Sum_probs=177.9
Q ss_pred CceEEEeeCCCCcEEEeeCCCCCCCCcceeeccCCEEEEecCCCCCCCCCceEEEEcCcccceecCCCCCCCCceeEEEE
Q 041767 48 AAALHVYDPNQNQWLRFDLSFLPFRSLHPVASSPGLIYLWGDLPDSPESNKSLIACNPLTRLYRVLPQLGSAWSKHGSVL 127 (341)
Q Consensus 48 ~~~~~~yd~~~~~W~~l~~~~~p~~~~~~~~~~~glv~~~g~~~~~~~~~~~~~v~nP~t~~w~~lp~~~~~~~~~~~~~ 127 (341)
...+..||+.+++|..++.+..++..+. +++.+|.||+.||.. ....+.+++|||.|++|..+++|+.+|..+++++
T Consensus 23 ~~~~~~~d~~~~~W~~~~~~p~~r~~~~-~~~~~~~lyv~GG~~--~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~ 99 (306)
T 3ii7_A 23 PQSCRYFNPKDYSWTDIRCPFEKRRDAA-CVFWDNVVYILGGSQ--LFPIKRMDCYNVVKDSWYSKLGPPTPRDSLAACA 99 (306)
T ss_dssp TTSEEEEETTTTEEEECCCCSCCCBSCE-EEEETTEEEEECCBS--SSBCCEEEEEETTTTEEEEEECCSSCCBSCEEEE
T ss_pred CceEEEecCCCCCEecCCCCCcccceeE-EEEECCEEEEEeCCC--CCCcceEEEEeCCCCeEEECCCCCccccceeEEE
Confidence 4568999999999999985545655554 677899999999863 2346789999999999999999988888777666
Q ss_pred EcCCCcEEEEcC---------eEEEEEcCCCccccccccCCCCCCCc---ccccCceEEEeecCCCcCCcceeeEeeccc
Q 041767 128 VDSLNKVMVLTE---------LAALFFSNSNHWLKFSSNLPSKPRSP---ILMLNSVYALCDVGSPWRSQWKLFCCNLSS 195 (341)
Q Consensus 128 ~~~~~ki~~~g~---------~~evYd~~t~~W~~~~~~~p~~~r~~---~~~~~~~y~~~~~G~~~~~~~~~~~~~~~~ 195 (341)
. +++||++|+ .+++||+.+++|+.++. +|. +|.. +..++.+|++ || .......
T Consensus 100 ~--~~~iyv~GG~~~~~~~~~~~~~~d~~~~~W~~~~~-~p~-~r~~~~~~~~~~~iyv~--GG---------~~~~~~~ 164 (306)
T 3ii7_A 100 A--EGKIYTSGGSEVGNSALYLFECYDTRTESWHTKPS-MLT-QRCSHGMVEANGLIYVC--GG---------SLGNNVS 164 (306)
T ss_dssp E--TTEEEEECCBBTTBSCCCCEEEEETTTTEEEEECC-CSS-CCBSCEEEEETTEEEEE--CC---------EESCTTT
T ss_pred E--CCEEEEECCCCCCCcEeeeEEEEeCCCCceEeCCC-CcC-CcceeEEEEECCEEEEE--CC---------CCCCCCc
Confidence 5 689999973 58999999999999984 774 3332 2345567776 33 1111000
Q ss_pred -CCCCceeEEEcccccccccccc---cCCccEEEEeCCEEEEEEeeccccccccccceEEEEEEeCCCCcEEEeccCCHH
Q 041767 196 -LTNSQQFWHCLERREWGDVFDI---LKRPRLVRGVGNRILMIGGLKSSFTLNASCSTILILRLDLDLLEWEEAGRMPVE 271 (341)
Q Consensus 196 -~~~~~v~~yD~~~~~W~~~~~~---~~~~~lv~~~~g~l~vvgg~~~~~~~~~~~~~~~vw~~d~~~~~W~~~~~mp~~ 271 (341)
.....++.||+++++|+.++.. ...+.++.+ +++||++||.... ... -.+|.||+++++|++++.||.+
T Consensus 165 ~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~-~~~i~v~GG~~~~----~~~--~~~~~yd~~~~~W~~~~~~p~~ 237 (306)
T 3ii7_A 165 GRVLNSCEVYDPATETWTELCPMIEARKNHGLVFV-KDKIFAVGGQNGL----GGL--DNVEYYDIKLNEWKMVSPMPWK 237 (306)
T ss_dssp CEECCCEEEEETTTTEEEEECCCSSCCBSCEEEEE-TTEEEEECCEETT----EEB--CCEEEEETTTTEEEECCCCSCC
T ss_pred ccccceEEEeCCCCCeEEECCCccchhhcceEEEE-CCEEEEEeCCCCC----CCC--ceEEEeeCCCCcEEECCCCCCC
Confidence 0034699999999999998632 223556665 8999999997543 111 2478899999999999999865
Q ss_pred HHHhhcCCCceEEEecCCEEEEEEcc-----cCcEEEEEeeeCCCCeeEEcCCCCCC
Q 041767 272 MYRCFSESSKFKVFGMGDKVCFSAKR-----VGRLALWECEKGGGGEWRWIDGLPGI 323 (341)
Q Consensus 272 ~~~~~~~~~~~~~~~~~~~i~~~~~~-----~~~v~~yD~~~~~~~~W~~~~~~~~~ 323 (341)
+.. ..++..++.||+.++. ...+.+||+. +++|+.++.+|..
T Consensus 238 r~~-------~~~~~~~~~i~v~GG~~~~~~~~~~~~yd~~---~~~W~~~~~~~~~ 284 (306)
T 3ii7_A 238 GVT-------VKCAAVGSIVYVLAGFQGVGRLGHILEYNTE---TDKWVANSKVRAF 284 (306)
T ss_dssp BSC-------CEEEEETTEEEEEECBCSSSBCCEEEEEETT---TTEEEEEEEEECC
T ss_pred ccc-------eeEEEECCEEEEEeCcCCCeeeeeEEEEcCC---CCeEEeCCCcccc
Confidence 322 2445557889888763 3678999999 9999999887743
No 2
>1zgk_A Kelch-like ECH-associated protein 1; beta-propeller, kelch repeat motif, protein binding; HET: MSE; 1.35A {Homo sapiens} SCOP: b.68.11.1 PDB: 2flu_X 1u6d_X 1x2j_A 1x2r_A 2dyh_A 2z32_A 3ade_A
Probab=99.95 E-value=2.5e-26 Score=205.23 Aligned_cols=240 Identities=15% Similarity=0.233 Sum_probs=175.7
Q ss_pred CceEEEeeCCCCcEEEeeCCCCCCCCcceeeccCCEEEEecCCC---CCCCCCceEEEEcCcccceecCCCCCCCCceeE
Q 041767 48 AAALHVYDPNQNQWLRFDLSFLPFRSLHPVASSPGLIYLWGDLP---DSPESNKSLIACNPLTRLYRVLPQLGSAWSKHG 124 (341)
Q Consensus 48 ~~~~~~yd~~~~~W~~l~~~~~p~~~~~~~~~~~glv~~~g~~~---~~~~~~~~~~v~nP~t~~w~~lp~~~~~~~~~~ 124 (341)
...+.+||+.+++|..++.+..++..+. +++.++.||+.||.. ......+.+++|||.|++|+.+++|+.+|..++
T Consensus 38 ~~~~~~~d~~~~~W~~~~~~p~~r~~~~-~~~~~~~lyv~GG~~~~~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~ 116 (308)
T 1zgk_A 38 LSYLEAYNPSNGTWLRLADLQVPRSGLA-GCVVGGLLYAVGGRNNSPDGNTDSSALDCYNPMTNQWSPCAPMSVPRNRIG 116 (308)
T ss_dssp CCCEEEEETTTTEEEECCCCSSCCBSCE-EEEETTEEEEECCEEEETTEEEECCCEEEEETTTTEEEECCCCSSCCBTCE
T ss_pred cceEEEEcCCCCeEeECCCCCcccccce-EEEECCEEEEECCCcCCCCCCeecceEEEECCCCCeEeECCCCCcCccccE
Confidence 4568999999999999974444554554 677899999998851 111234679999999999999999998888877
Q ss_pred EEEEcCCCcEEEEcC--------eEEEEEcCCCccccccccCCCCCCCc---ccccCceEEEeecCCCcCCcceeeEeec
Q 041767 125 SVLVDSLNKVMVLTE--------LAALFFSNSNHWLKFSSNLPSKPRSP---ILMLNSVYALCDVGSPWRSQWKLFCCNL 193 (341)
Q Consensus 125 ~~~~~~~~ki~~~g~--------~~evYd~~t~~W~~~~~~~p~~~r~~---~~~~~~~y~~~~~G~~~~~~~~~~~~~~ 193 (341)
+++. +++||++|+ .+++||+.+++|+.++. +|. +|.. +..++.+|++ ||. .
T Consensus 117 ~~~~--~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~-~p~-~r~~~~~~~~~~~iyv~--GG~---------~--- 178 (308)
T 1zgk_A 117 VGVI--DGHIYAVGGSHGCIHHNSVERYEPERDEWHLVAP-MLT-RRIGVGVAVLNRLLYAV--GGF---------D--- 178 (308)
T ss_dssp EEEE--TTEEEEECCEETTEECCCEEEEETTTTEEEECCC-CSS-CCBSCEEEEETTEEEEE--CCB---------C---
T ss_pred EEEE--CCEEEEEcCCCCCcccccEEEECCCCCeEeECCC-CCc-cccceEEEEECCEEEEE--eCC---------C---
Confidence 6666 689999973 69999999999999984 774 3332 2345567776 331 0
Q ss_pred ccCCCCceeEEEcccccccccccc---cCCccEEEEeCCEEEEEEeeccccccccccceEEEEEEeCCCCcEEEeccCCH
Q 041767 194 SSLTNSQQFWHCLERREWGDVFDI---LKRPRLVRGVGNRILMIGGLKSSFTLNASCSTILILRLDLDLLEWEEAGRMPV 270 (341)
Q Consensus 194 ~~~~~~~v~~yD~~~~~W~~~~~~---~~~~~lv~~~~g~l~vvgg~~~~~~~~~~~~~~~vw~~d~~~~~W~~~~~mp~ 270 (341)
.....+.++.||+.+++|+.++.. ...+.++.+ +++||++||.... ... -++|.||+++++|+++..||.
T Consensus 179 ~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~-~~~iyv~GG~~~~----~~~--~~v~~yd~~~~~W~~~~~~p~ 251 (308)
T 1zgk_A 179 GTNRLNSAECYYPERNEWRMITAMNTIRSGAGVCVL-HNCIYAAGGYDGQ----DQL--NSVERYDVETETWTFVAPMKH 251 (308)
T ss_dssp SSCBCCCEEEEETTTTEEEECCCCSSCCBSCEEEEE-TTEEEEECCBCSS----SBC--CCEEEEETTTTEEEECCCCSS
T ss_pred CCCcCceEEEEeCCCCeEeeCCCCCCccccceEEEE-CCEEEEEeCCCCC----Ccc--ceEEEEeCCCCcEEECCCCCC
Confidence 111134799999999999987632 223456664 8999999998643 111 257889999999999999886
Q ss_pred HHHHhhcCCCceEEEecCCEEEEEEcc-----cCcEEEEEeeeCCCCeeEEcCCCCCC
Q 041767 271 EMYRCFSESSKFKVFGMGDKVCFSAKR-----VGRLALWECEKGGGGEWRWIDGLPGI 323 (341)
Q Consensus 271 ~~~~~~~~~~~~~~~~~~~~i~~~~~~-----~~~v~~yD~~~~~~~~W~~~~~~~~~ 323 (341)
++.. ..++..++.||+.++. ...+.+||+. +++|+.++.+|..
T Consensus 252 ~r~~-------~~~~~~~~~i~v~GG~~~~~~~~~v~~yd~~---~~~W~~~~~~p~~ 299 (308)
T 1zgk_A 252 RRSA-------LGITVHQGRIYVLGGYDGHTFLDSVECYDPD---TDTWSEVTRMTSG 299 (308)
T ss_dssp CCBS-------CEEEEETTEEEEECCBCSSCBCCEEEEEETT---TTEEEEEEECSSC
T ss_pred Cccc-------eEEEEECCEEEEEcCcCCCcccceEEEEcCC---CCEEeecCCCCCC
Confidence 5322 2344457888887653 3668999999 9999999988853
No 3
>2xn4_A Kelch-like protein 2; structural protein, cytoskeleton; 1.99A {Homo sapiens}
Probab=99.95 E-value=8.2e-26 Score=201.14 Aligned_cols=240 Identities=12% Similarity=0.191 Sum_probs=175.0
Q ss_pred CceEEEeeCCCCcEEEeeCCCCCCCCcceeeccCCEEEEecCCCCCCCCCceEEEEcCcccceecCCCCCCCCceeEEEE
Q 041767 48 AAALHVYDPNQNQWLRFDLSFLPFRSLHPVASSPGLIYLWGDLPDSPESNKSLIACNPLTRLYRVLPQLGSAWSKHGSVL 127 (341)
Q Consensus 48 ~~~~~~yd~~~~~W~~l~~~~~p~~~~~~~~~~~glv~~~g~~~~~~~~~~~~~v~nP~t~~w~~lp~~~~~~~~~~~~~ 127 (341)
...+.+||+.+++|..++....++..+. +++.++.||+.||... ....+.+++|||.|++|..+++|+.+|..+++++
T Consensus 29 ~~~~~~~d~~~~~W~~~~~~p~~r~~~~-~~~~~~~lyv~GG~~~-~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~ 106 (302)
T 2xn4_A 29 IRSVECYDFKEERWHQVAELPSRRCRAG-MVYMAGLVFAVGGFNG-SLRVRTVDSYDPVKDQWTSVANMRDRRSTLGAAV 106 (302)
T ss_dssp CCCEEEEETTTTEEEEECCCSSCCBSCE-EEEETTEEEEESCBCS-SSBCCCEEEEETTTTEEEEECCCSSCCBSCEEEE
T ss_pred CCcEEEEcCcCCcEeEcccCCcccccce-EEEECCEEEEEeCcCC-CccccceEEECCCCCceeeCCCCCccccceEEEE
Confidence 3568999999999999974434544454 6677999999998522 2235789999999999999999998888887666
Q ss_pred EcCCCcEEEEcC--------eEEEEEcCCCccccccccCCCCCCCc---ccccCceEEEeecCCCcCCcceeeEeecccC
Q 041767 128 VDSLNKVMVLTE--------LAALFFSNSNHWLKFSSNLPSKPRSP---ILMLNSVYALCDVGSPWRSQWKLFCCNLSSL 196 (341)
Q Consensus 128 ~~~~~ki~~~g~--------~~evYd~~t~~W~~~~~~~p~~~r~~---~~~~~~~y~~~~~G~~~~~~~~~~~~~~~~~ 196 (341)
. +++||++|+ .+++||+.+++|+.++. +|. +|.. +..++.+|++ || .... ...
T Consensus 107 ~--~~~iyv~GG~~~~~~~~~~~~~d~~~~~W~~~~~-~p~-~r~~~~~~~~~~~iyv~--GG---------~~~~-~~~ 170 (302)
T 2xn4_A 107 L--NGLLYAVGGFDGSTGLSSVEAYNIKSNEWFHVAP-MNT-RRSSVGVGVVGGLLYAV--GG---------YDVA-SRQ 170 (302)
T ss_dssp E--TTEEEEEEEECSSCEEEEEEEEETTTTEEEEECC-CSS-CCBSCEEEEETTEEEEE--CC---------EETT-TTE
T ss_pred E--CCEEEEEcCCCCCccCceEEEEeCCCCeEeecCC-CCC-cccCceEEEECCEEEEE--eC---------CCCC-CCc
Confidence 6 689999973 69999999999999984 774 3432 2345667776 33 1110 000
Q ss_pred CCCceeEEEcccccccccccc---cCCccEEEEeCCEEEEEEeeccccccccccceEEEEEEeCCCCcEEEeccCCHHHH
Q 041767 197 TNSQQFWHCLERREWGDVFDI---LKRPRLVRGVGNRILMIGGLKSSFTLNASCSTILILRLDLDLLEWEEAGRMPVEMY 273 (341)
Q Consensus 197 ~~~~v~~yD~~~~~W~~~~~~---~~~~~lv~~~~g~l~vvgg~~~~~~~~~~~~~~~vw~~d~~~~~W~~~~~mp~~~~ 273 (341)
..+.++.||+++++|+.++.. ...+.++.+ +++||++||.... ... -++|.||+++++|+++..||.++.
T Consensus 171 ~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~-~~~iyv~GG~~~~----~~~--~~~~~yd~~~~~W~~~~~~~~~r~ 243 (302)
T 2xn4_A 171 CLSTVECYNATTNEWTYIAEMSTRRSGAGVGVL-NNLLYAVGGHDGP----LVR--KSVEVYDPTTNAWRQVADMNMCRR 243 (302)
T ss_dssp ECCCEEEEETTTTEEEEECCCSSCCBSCEEEEE-TTEEEEECCBSSS----SBC--CCEEEEETTTTEEEEECCCSSCCB
T ss_pred cccEEEEEeCCCCcEEECCCCccccccccEEEE-CCEEEEECCCCCC----ccc--ceEEEEeCCCCCEeeCCCCCCccc
Confidence 124689999999999987632 223456664 8999999997542 111 247889999999999999886532
Q ss_pred HhhcCCCceEEEecCCEEEEEEcc-----cCcEEEEEeeeCCCCeeEEcC-CCCC
Q 041767 274 RCFSESSKFKVFGMGDKVCFSAKR-----VGRLALWECEKGGGGEWRWID-GLPG 322 (341)
Q Consensus 274 ~~~~~~~~~~~~~~~~~i~~~~~~-----~~~v~~yD~~~~~~~~W~~~~-~~~~ 322 (341)
. ..++..++.||+.++. ...+++||+. +++|+.++ .+|.
T Consensus 244 ~-------~~~~~~~~~i~v~GG~~~~~~~~~v~~yd~~---~~~W~~~~~~~~~ 288 (302)
T 2xn4_A 244 N-------AGVCAVNGLLYVVGGDDGSCNLASVEYYNPT---TDKWTVVSSCMST 288 (302)
T ss_dssp S-------CEEEEETTEEEEECCBCSSSBCCCEEEEETT---TTEEEECSSCCSS
T ss_pred c-------CeEEEECCEEEEECCcCCCcccccEEEEcCC---CCeEEECCcccCc
Confidence 1 2345557888887653 2568999999 99999997 6764
No 4
>4asc_A Kelch repeat and BTB domain-containing protein 5; protein binding, cytoskeleton; 1.78A {Homo sapiens}
Probab=99.94 E-value=3.1e-25 Score=198.71 Aligned_cols=240 Identities=15% Similarity=0.167 Sum_probs=171.5
Q ss_pred ceEEEeeCCCCcEEEeeCCC-CCCCCcceeeccCCEEEEecCCC-----CCCCCCceEEEEcCcccceecCCCCCCCCce
Q 041767 49 AALHVYDPNQNQWLRFDLSF-LPFRSLHPVASSPGLIYLWGDLP-----DSPESNKSLIACNPLTRLYRVLPQLGSAWSK 122 (341)
Q Consensus 49 ~~~~~yd~~~~~W~~l~~~~-~p~~~~~~~~~~~glv~~~g~~~-----~~~~~~~~~~v~nP~t~~w~~lp~~~~~~~~ 122 (341)
..+..|||.+++|...++|. .|+..+. +++.++.||+.||.. ......+.+++|||.|++|+.+++|+.+|..
T Consensus 13 ~~~~~yd~~~~~W~~~~~~~p~~r~~~~-~~~~~~~iyv~GG~~~~~~~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~ 91 (315)
T 4asc_A 13 EGAVAYDPAANECYCASLSSQVPKNHVS-LVTKENQVFVAGGLFYNEDNKEDPMSAYFLQFDHLDSEWLGMPPLPSPRCL 91 (315)
T ss_dssp TEEEEEETTTTEEEEEECCCCSCSSEEE-EECTTCCEEEEEEEEECSSCSSSCEEEEEEEEETTTTEEEECCCBSSCEES
T ss_pred CceEEECCCCCeEecCCCCCCCCccceE-EEEECCEEEEEcCcccCCCCCccccccceEEecCCCCeEEECCCCCcchhc
Confidence 46899999999999755542 3444444 777899999988831 1111234589999999999999999988877
Q ss_pred eEEEEEcCCCcEEEEcC-----------eEEEEEcCCCccccccccCCCCCCCc---ccccCceEEEeecCCCcCCccee
Q 041767 123 HGSVLVDSLNKVMVLTE-----------LAALFFSNSNHWLKFSSNLPSKPRSP---ILMLNSVYALCDVGSPWRSQWKL 188 (341)
Q Consensus 123 ~~~~~~~~~~ki~~~g~-----------~~evYd~~t~~W~~~~~~~p~~~r~~---~~~~~~~y~~~~~G~~~~~~~~~ 188 (341)
+++++. +++||++|+ .+++||+.+++|+.++. +|. +|.. +..++.+|++ ||.
T Consensus 92 ~~~~~~--~~~lyv~GG~~~~~~~~~~~~~~~~d~~~~~W~~~~~-~p~-~r~~~~~~~~~~~iyv~--GG~-------- 157 (315)
T 4asc_A 92 FGLGEA--LNSIYVVGGREIKDGERCLDSVMCYDRLSFKWGESDP-LPY-VVYGHTVLSHMDLVYVI--GGK-------- 157 (315)
T ss_dssp CEEEEE--TTEEEEECCEESSTTCCBCCCEEEEETTTTEEEECCC-CSS-CCBSCEEEEETTEEEEE--CCB--------
T ss_pred eeEEEE--CCEEEEEeCCcCCCCCcccceEEEECCCCCcEeECCC-CCC-cccceeEEEECCEEEEE--eCC--------
Confidence 776665 689999974 48999999999999984 874 3432 2345567776 331
Q ss_pred eEeecccCCCCceeEEEcccccccccccc---cCCccEEEEeCCEEEEEEeeccccccccccceEEEEEEeCCCCcEEEe
Q 041767 189 FCCNLSSLTNSQQFWHCLERREWGDVFDI---LKRPRLVRGVGNRILMIGGLKSSFTLNASCSTILILRLDLDLLEWEEA 265 (341)
Q Consensus 189 ~~~~~~~~~~~~v~~yD~~~~~W~~~~~~---~~~~~lv~~~~g~l~vvgg~~~~~~~~~~~~~~~vw~~d~~~~~W~~~ 265 (341)
.......+.++.||+.+++|+.++.. ...+.++.+ +++||++||.... .. .-.+|.||+++++|+++
T Consensus 158 ---~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~-~~~iyv~GG~~~~----~~--~~~~~~yd~~~~~W~~~ 227 (315)
T 4asc_A 158 ---GSDRKCLNKMCVYDPKKFEWKELAPMQTARSLFGATVH-DGRIIVAAGVTDT----GL--TSSAEVYSITDNKWAPF 227 (315)
T ss_dssp ---CTTSCBCCCEEEEETTTTEEEECCCCSSCCBSCEEEEE-TTEEEEEEEECSS----SE--EEEEEEEETTTTEEEEE
T ss_pred ---CCCCcccceEEEEeCCCCeEEECCCCCCchhceEEEEE-CCEEEEEeccCCC----Cc--cceEEEEECCCCeEEEC
Confidence 00111134799999999999998632 223456664 8999999998653 11 23688999999999999
Q ss_pred ccCCHHHHHhhcCCCceEEEecCCEEEEEEcc--------------cCcEEEEEeeeCCCCeeEEcCCCCCC
Q 041767 266 GRMPVEMYRCFSESSKFKVFGMGDKVCFSAKR--------------VGRLALWECEKGGGGEWRWIDGLPGI 323 (341)
Q Consensus 266 ~~mp~~~~~~~~~~~~~~~~~~~~~i~~~~~~--------------~~~v~~yD~~~~~~~~W~~~~~~~~~ 323 (341)
+.||.++.. ..++..+++||+.++. ...+.+||++ +++|+.+.+.|+.
T Consensus 228 ~~~p~~r~~-------~~~~~~~~~l~v~GG~~~~~~~~~~~~~~~~~~v~~yd~~---~~~W~~~~~~~r~ 289 (315)
T 4asc_A 228 EAFPQERSS-------LSLVSLVGTLYAIGGFATLETESGELVPTELNDIWRYNEE---EKKWEGVLREIAY 289 (315)
T ss_dssp CCCSSCCBS-------CEEEEETTEEEEEEEEEEEECTTSCEEEEEEEEEEEEETT---TTEEEEEESCSSC
T ss_pred CCCCCcccc-------eeEEEECCEEEEECCccccCcCCccccccccCcEEEecCC---CChhhhhccCCcC
Confidence 999876432 2344456778776543 1458899999 9999999777643
No 5
>2vpj_A Kelch-like protein 12; adaptor protein, WNT signaling pathway, protein-binding, UBI degradation, UBL conjugation pathway, CUL3, kelch repeat; 1.85A {Homo sapiens}
Probab=99.94 E-value=1.7e-25 Score=198.87 Aligned_cols=238 Identities=12% Similarity=0.150 Sum_probs=175.0
Q ss_pred CceEEEeeCCCCcEEEeeCCCCCCCCcceeeccCCEEEEecCCCCCCCCCceEEEEcCcccc---eecCCCCCCCCceeE
Q 041767 48 AAALHVYDPNQNQWLRFDLSFLPFRSLHPVASSPGLIYLWGDLPDSPESNKSLIACNPLTRL---YRVLPQLGSAWSKHG 124 (341)
Q Consensus 48 ~~~~~~yd~~~~~W~~l~~~~~p~~~~~~~~~~~glv~~~g~~~~~~~~~~~~~v~nP~t~~---w~~lp~~~~~~~~~~ 124 (341)
...+..||+.+++|..++....++..+. +++.++.||+.||.. .....+.+++|||.|++ |+.+++|+.+|..++
T Consensus 30 ~~~~~~~d~~~~~W~~~~~~p~~r~~~~-~~~~~~~l~v~GG~~-~~~~~~~~~~~d~~~~~~~~W~~~~~~p~~r~~~~ 107 (301)
T 2vpj_A 30 IDVVEKYDPKTQEWSFLPSITRKRRYVA-SVSLHDRIYVIGGYD-GRSRLSSVECLDYTADEDGVWYSVAPMNVRRGLAG 107 (301)
T ss_dssp CCCEEEEETTTTEEEECCCCSSCCBSCE-EEEETTEEEEECCBC-SSCBCCCEEEEETTCCTTCCCEEECCCSSCCBSCE
T ss_pred eeEEEEEcCCCCeEEeCCCCChhhcccc-EEEECCEEEEEcCCC-CCccCceEEEEECCCCCCCeeEECCCCCCCcccee
Confidence 4568999999999999884334554554 677899999998853 22345789999999999 999999988888877
Q ss_pred EEEEcCCCcEEEEcC--------eEEEEEcCCCccccccccCCCCCCCc---ccccCceEEEeecCCCcCCcceeeEeec
Q 041767 125 SVLVDSLNKVMVLTE--------LAALFFSNSNHWLKFSSNLPSKPRSP---ILMLNSVYALCDVGSPWRSQWKLFCCNL 193 (341)
Q Consensus 125 ~~~~~~~~ki~~~g~--------~~evYd~~t~~W~~~~~~~p~~~r~~---~~~~~~~y~~~~~G~~~~~~~~~~~~~~ 193 (341)
+++. +++||++|+ .+++||+.+++|+.++. +|. +|.. +..++.+|++ ||. .
T Consensus 108 ~~~~--~~~lyv~GG~~~~~~~~~~~~~d~~~~~W~~~~~-~p~-~r~~~~~~~~~~~iyv~--GG~---------~--- 169 (301)
T 2vpj_A 108 ATTL--GDMIYVSGGFDGSRRHTSMERYDPNIDQWSMLGD-MQT-AREGAGLVVASGVIYCL--GGY---------D--- 169 (301)
T ss_dssp EEEE--TTEEEEECCBCSSCBCCEEEEEETTTTEEEEEEE-CSS-CCBSCEEEEETTEEEEE--CCB---------C---
T ss_pred EEEE--CCEEEEEcccCCCcccceEEEEcCCCCeEEECCC-CCC-CcccceEEEECCEEEEE--CCC---------C---
Confidence 6666 689999973 69999999999999984 773 3332 2344567776 331 0
Q ss_pred ccCCCCceeEEEcccccccccccc---cCCccEEEEeCCEEEEEEeeccccccccccceEEEEEEeCCCCcEEEeccCCH
Q 041767 194 SSLTNSQQFWHCLERREWGDVFDI---LKRPRLVRGVGNRILMIGGLKSSFTLNASCSTILILRLDLDLLEWEEAGRMPV 270 (341)
Q Consensus 194 ~~~~~~~v~~yD~~~~~W~~~~~~---~~~~~lv~~~~g~l~vvgg~~~~~~~~~~~~~~~vw~~d~~~~~W~~~~~mp~ 270 (341)
.....+.++.||+++++|+.++.. ...+.++.+ +++||++||.... ... -++|.||+++++|+++..||.
T Consensus 170 ~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~-~~~i~v~GG~~~~----~~~--~~v~~yd~~~~~W~~~~~~p~ 242 (301)
T 2vpj_A 170 GLNILNSVEKYDPHTGHWTNVTPMATKRSGAGVALL-NDHIYVVGGFDGT----AHL--SSVEAYNIRTDSWTTVTSMTT 242 (301)
T ss_dssp SSCBCCCEEEEETTTTEEEEECCCSSCCBSCEEEEE-TTEEEEECCBCSS----SBC--CCEEEEETTTTEEEEECCCSS
T ss_pred CCcccceEEEEeCCCCcEEeCCCCCcccccceEEEE-CCEEEEEeCCCCC----ccc--ceEEEEeCCCCcEEECCCCCC
Confidence 111134699999999999987632 223456664 8999999997643 111 247889999999999999986
Q ss_pred HHHHhhcCCCceEEEecCCEEEEEEccc-----CcEEEEEeeeCCCCeeEEcCCCCC
Q 041767 271 EMYRCFSESSKFKVFGMGDKVCFSAKRV-----GRLALWECEKGGGGEWRWIDGLPG 322 (341)
Q Consensus 271 ~~~~~~~~~~~~~~~~~~~~i~~~~~~~-----~~v~~yD~~~~~~~~W~~~~~~~~ 322 (341)
++.. ..++..++.||+.++.. ..+.+||++ +++|+.++.+|.
T Consensus 243 ~r~~-------~~~~~~~~~i~v~GG~~~~~~~~~v~~yd~~---~~~W~~~~~~~~ 289 (301)
T 2vpj_A 243 PRCY-------VGATVLRGRLYAIAGYDGNSLLSSIECYDPI---IDSWEVVTSMGT 289 (301)
T ss_dssp CCBS-------CEEEEETTEEEEECCBCSSSBEEEEEEEETT---TTEEEEEEEEEE
T ss_pred cccc-------eeEEEECCEEEEEcCcCCCcccccEEEEcCC---CCeEEEcCCCCc
Confidence 6322 23455578888876532 468999999 999999998874
No 6
>2woz_A Kelch repeat and BTB domain-containing protein 10; protein binding, invasion and metastasis, UBL conjugation pathway, UBL protein folding; 2.00A {Rattus norvegicus}
Probab=99.93 E-value=2.8e-24 Score=192.70 Aligned_cols=234 Identities=18% Similarity=0.264 Sum_probs=166.7
Q ss_pred ceEEEeeCCCCcEEEeeCCC-CCCCCcceeeccCCEEEEecCCC-C--CC--CCCceEEEEcCcccceecCCCCCCCCce
Q 041767 49 AALHVYDPNQNQWLRFDLSF-LPFRSLHPVASSPGLIYLWGDLP-D--SP--ESNKSLIACNPLTRLYRVLPQLGSAWSK 122 (341)
Q Consensus 49 ~~~~~yd~~~~~W~~l~~~~-~p~~~~~~~~~~~glv~~~g~~~-~--~~--~~~~~~~v~nP~t~~w~~lp~~~~~~~~ 122 (341)
..+.+|||.+++|...+.+. .|+..+ .+++.++.||+.||.. + .. .....+++|||.|++|..+++|+.+|..
T Consensus 24 ~~~~~yd~~~~~W~~~~~~~~~~r~~~-~~~~~~~~lyv~GG~~~~~~~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~ 102 (318)
T 2woz_A 24 TAAVAYDPMENECYLTALAEQIPRNHS-SIVTQQNQVYVVGGLYVDEENKDQPLQSYFFQLDNVSSEWVGLPPLPSARCL 102 (318)
T ss_dssp SEEEEEETTTTEEEEEEECTTSCSSEE-EEECSSSCEEEEESSCC-------CCCBEEEEEETTTTEEEECSCBSSCBCS
T ss_pred cceEEECCCCCceecccCCccCCccce-EEEEECCEEEEECCcccCccccCCCccccEEEEeCCCCcEEECCCCCccccc
Confidence 34789999999999866443 354444 3777899999998841 1 11 1123489999999999999999988887
Q ss_pred eEEEEEcCCCcEEEEcC----------eEEEEEcCCCccccccccCCCCCCCc---ccccCceEEEeecCCCcCCcceee
Q 041767 123 HGSVLVDSLNKVMVLTE----------LAALFFSNSNHWLKFSSNLPSKPRSP---ILMLNSVYALCDVGSPWRSQWKLF 189 (341)
Q Consensus 123 ~~~~~~~~~~ki~~~g~----------~~evYd~~t~~W~~~~~~~p~~~r~~---~~~~~~~y~~~~~G~~~~~~~~~~ 189 (341)
+++++. +++||++|+ .+++||+.+++|+.++. +|. +|.. +..++.+|++ || .
T Consensus 103 ~~~~~~--~~~iyv~GG~~~~~~~~~~~~~~yd~~~~~W~~~~~-~p~-~r~~~~~~~~~~~iyv~--GG---------~ 167 (318)
T 2woz_A 103 FGLGEV--DDKIYVVAGKDLQTEASLDSVLCYDPVAAKWSEVKN-LPI-KVYGHNVISHNGMIYCL--GG---------K 167 (318)
T ss_dssp CEEEEE--TTEEEEEEEEBTTTCCEEEEEEEEETTTTEEEEECC-CSS-CEESCEEEEETTEEEEE--CC---------E
T ss_pred cceEEE--CCEEEEEcCccCCCCcccceEEEEeCCCCCEeECCC-CCC-cccccEEEEECCEEEEE--cC---------C
Confidence 776666 689999873 58999999999999984 774 3322 2344567776 33 1
Q ss_pred EeecccCCCCceeEEEcccccccccccc---cCCccEEEEeCCEEEEEEeeccccccccccceEEEEEEeCCCCcEEEec
Q 041767 190 CCNLSSLTNSQQFWHCLERREWGDVFDI---LKRPRLVRGVGNRILMIGGLKSSFTLNASCSTILILRLDLDLLEWEEAG 266 (341)
Q Consensus 190 ~~~~~~~~~~~v~~yD~~~~~W~~~~~~---~~~~~lv~~~~g~l~vvgg~~~~~~~~~~~~~~~vw~~d~~~~~W~~~~ 266 (341)
.. .....+.++.||+++++|+.++.. ...+.++.+ +++||++||.... .. .-.+|.||+++++|+++.
T Consensus 168 ~~--~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~-~~~iyv~GG~~~~----~~--~~~~~~yd~~~~~W~~~~ 238 (318)
T 2woz_A 168 TD--DKKCTNRVFIYNPKKGDWKDLAPMKTPRSMFGVAIH-KGKIVIAGGVTED----GL--SASVEAFDLKTNKWEVMT 238 (318)
T ss_dssp ES--SSCBCCCEEEEETTTTEEEEECCCSSCCBSCEEEEE-TTEEEEEEEEETT----EE--EEEEEEEETTTCCEEECC
T ss_pred CC--CCCccceEEEEcCCCCEEEECCCCCCCcccceEEEE-CCEEEEEcCcCCC----Cc--cceEEEEECCCCeEEECC
Confidence 10 111134699999999999998632 223455664 8999999998653 11 236788999999999999
Q ss_pred cCCHHHHHhhcCCCceEEEecCCEEEEEEcc--------------cCcEEEEEeeeCCCCeeEEc
Q 041767 267 RMPVEMYRCFSESSKFKVFGMGDKVCFSAKR--------------VGRLALWECEKGGGGEWRWI 317 (341)
Q Consensus 267 ~mp~~~~~~~~~~~~~~~~~~~~~i~~~~~~--------------~~~v~~yD~~~~~~~~W~~~ 317 (341)
.||.++.. ..++..++.||+.++. ...+.+||+. +++|+.+
T Consensus 239 ~~p~~r~~-------~~~~~~~~~i~v~GG~~~~~~~~~~~~~~~~~~v~~yd~~---~~~W~~~ 293 (318)
T 2woz_A 239 EFPQERSS-------ISLVSLAGSLYAIGGFAMIQLESKEFAPTEVNDIWKYEDD---KKEWAGM 293 (318)
T ss_dssp CCSSCCBS-------CEEEEETTEEEEECCBCCBC----CCBCCBCCCEEEEETT---TTEEEEE
T ss_pred CCCCcccc-------eEEEEECCEEEEECCeeccCCCCceeccceeeeEEEEeCC---CCEehhh
Confidence 99876332 2344456778776542 2568999999 9999998
No 7
>2uvk_A YJHT; unknown function, hypothetical protein, sialic acid metabolism, kelch repeat, beta-propeller; HET: MSE; 1.50A {Escherichia coli}
Probab=99.90 E-value=2.1e-22 Score=183.30 Aligned_cols=246 Identities=11% Similarity=0.080 Sum_probs=161.2
Q ss_pred ceEEEeeCC--CCcEEEeeCCC-CCCCCcceeeccCCEEEEecCC-C--C-CCCCCceEEEEcCcccceecCCCCC-CCC
Q 041767 49 AALHVYDPN--QNQWLRFDLSF-LPFRSLHPVASSPGLIYLWGDL-P--D-SPESNKSLIACNPLTRLYRVLPQLG-SAW 120 (341)
Q Consensus 49 ~~~~~yd~~--~~~W~~l~~~~-~p~~~~~~~~~~~glv~~~g~~-~--~-~~~~~~~~~v~nP~t~~w~~lp~~~-~~~ 120 (341)
..++.||+. +++|..++... .|+..+. +++.+|.||+.||. . . .....+.+++|||.|++|+.+++|+ .+|
T Consensus 31 ~~~~~~d~~~~~~~W~~~~~~p~~~R~~~~-~~~~~~~lyv~GG~~~~~~~~~~~~~~v~~yd~~~~~W~~~~~~~p~~r 109 (357)
T 2uvk_A 31 TAWYKLDTQAKDKKWTALAAFPGGPRDQAT-SAFIDGNLYVFGGIGKNSEGLTQVFNDVHKYNPKTNSWVKLMSHAPMGM 109 (357)
T ss_dssp TCEEEEETTSSSCCEEECCCCTTCCCBSCE-EEEETTEEEEECCEEECTTSCEEECCCEEEEETTTTEEEECSCCCSSCC
T ss_pred CeEEEEccccCCCCeeECCCCCCCcCccce-EEEECCEEEEEcCCCCCCCccceeeccEEEEeCCCCcEEECCCCCCccc
Confidence 468999998 48999998543 4555554 77789999999885 1 1 1123568999999999999999987 666
Q ss_pred ceeEEEEEcCCCcEEEEcC------------------------------------------eEEEEEcCCCccccccccC
Q 041767 121 SKHGSVLVDSLNKVMVLTE------------------------------------------LAALFFSNSNHWLKFSSNL 158 (341)
Q Consensus 121 ~~~~~~~~~~~~ki~~~g~------------------------------------------~~evYd~~t~~W~~~~~~~ 158 (341)
..+++++. +++||++|+ .+++||+.+++|+.++. +
T Consensus 110 ~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~yd~~~~~W~~~~~-~ 186 (357)
T 2uvk_A 110 AGHVTFVH--NGKAYVTGGVNQNIFNGYFEDLNEAGKDSTAIDKINAHYFDKKAEDYFFNKFLLSFDPSTQQWSYAGE-S 186 (357)
T ss_dssp SSEEEEEE--TTEEEEEECCCHHHHHHHHHHHHHHTTCHHHHHHHHHHHHSSCGGGGCCCCEEEEEETTTTEEEEEEE-C
T ss_pred ccceEEEE--CCEEEEEeCcCCCcCcccccchhhcCCcccchhhhhhhhccccccccCCcccEEEEeCCCCcEEECCC-C
Confidence 66655554 689999873 58999999999999984 7
Q ss_pred CCCCCC-c--ccccCceEEEeecCCCcCCcceeeEeecccCCCCceeEEEc--cccccccccccc-----CCccEEEEeC
Q 041767 159 PSKPRS-P--ILMLNSVYALCDVGSPWRSQWKLFCCNLSSLTNSQQFWHCL--ERREWGDVFDIL-----KRPRLVRGVG 228 (341)
Q Consensus 159 p~~~r~-~--~~~~~~~y~~~~~G~~~~~~~~~~~~~~~~~~~~~v~~yD~--~~~~W~~~~~~~-----~~~~lv~~~~ 228 (341)
|..++. . +..++.+|++ || .... ......+..||+ ++++|+.++... ..+.++. .+
T Consensus 187 p~~~~~~~~~~~~~~~iyv~--GG---------~~~~--~~~~~~v~~~d~d~~~~~W~~~~~~~~~~~~~~~~~~~-~~ 252 (357)
T 2uvk_A 187 PWYGTAGAAVVNKGDKTWLI--NG---------EAKP--GLRTDAVFELDFTGNNLKWNKLAPVSSPDGVAGGFAGI-SN 252 (357)
T ss_dssp SSCCCBSCEEEEETTEEEEE--CC---------EEET--TEECCCEEEEECC---CEEEECCCSSTTTCCBSCEEEE-ET
T ss_pred CCCCcccccEEEECCEEEEE--ee---------ecCC--CcccCceEEEEecCCCCcEEecCCCCCCcccccceEEE-EC
Confidence 743333 2 2345677776 34 1111 011235788876 899999876321 1233555 48
Q ss_pred CEEEEEEeeccccc-----------cccccceEEEEEEeCCCCcEEEeccCCHHHHHhhcCCCceEEEecCCEEEEEEcc
Q 041767 229 NRILMIGGLKSSFT-----------LNASCSTILILRLDLDLLEWEEAGRMPVEMYRCFSESSKFKVFGMGDKVCFSAKR 297 (341)
Q Consensus 229 g~l~vvgg~~~~~~-----------~~~~~~~~~vw~~d~~~~~W~~~~~mp~~~~~~~~~~~~~~~~~~~~~i~~~~~~ 297 (341)
++||++||...... .++......++.||+++++|++++.||.++.. ..++..+++|||.++.
T Consensus 253 ~~iyv~GG~~~~~~~~~~~~g~~~~~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~-------~~~~~~~~~i~v~GG~ 325 (357)
T 2uvk_A 253 DSLIFAGGAGFKGSRENYQNGKNYAHEGLKKSYSTDIHLWHNGKWDKSGELSQGRAY-------GVSLPWNNSLLIIGGE 325 (357)
T ss_dssp TEEEEECCEECTTHHHHHHTTCSSTTTTCCCEECCEEEECC---CEEEEECSSCCBS-------SEEEEETTEEEEEEEE
T ss_pred CEEEEEcCccccCCcccccccceeccccccceeeEEEEecCCCceeeCCCCCCCccc-------ceeEEeCCEEEEEeee
Confidence 99999999753210 00111123577889999999999999876432 2345567888887653
Q ss_pred ------cCcEEEEEeeeCCCCeeEEcCCCCC
Q 041767 298 ------VGRLALWECEKGGGGEWRWIDGLPG 322 (341)
Q Consensus 298 ------~~~v~~yD~~~~~~~~W~~~~~~~~ 322 (341)
...++.+|++ +++|......|.
T Consensus 326 ~~~~~~~~~v~~l~~~---~~~~~~~~~~~~ 353 (357)
T 2uvk_A 326 TAGGKAVTDSVLITVK---DNKVTVQNLEHH 353 (357)
T ss_dssp CGGGCEEEEEEEEEC----CCSCEEEC----
T ss_pred CCCCCEeeeEEEEEEc---CcEeEeeecccc
Confidence 1457889999 999999887764
No 8
>3ii7_A Kelch-like protein 7; protein-binding, kelch-repeat, structural genomics, structur genomics consortium, SGC, kelch repeat, nucleus, protein BI; 1.63A {Homo sapiens}
Probab=99.88 E-value=3.7e-21 Score=171.32 Aligned_cols=199 Identities=14% Similarity=0.194 Sum_probs=147.1
Q ss_pred CceEEEeeCCCCcEEEeeCCCCCCCCcceeeccCCEEEEecCCCCCCCCCceEEEEcCcccceecCCCCCCCCceeEEEE
Q 041767 48 AAALHVYDPNQNQWLRFDLSFLPFRSLHPVASSPGLIYLWGDLPDSPESNKSLIACNPLTRLYRVLPQLGSAWSKHGSVL 127 (341)
Q Consensus 48 ~~~~~~yd~~~~~W~~l~~~~~p~~~~~~~~~~~glv~~~g~~~~~~~~~~~~~v~nP~t~~w~~lp~~~~~~~~~~~~~ 127 (341)
...++.||+.+++|..++.+..++..+. +++.+|.||+.||........+.+++|||.+++|..+++|+.+|..+++++
T Consensus 69 ~~~~~~~d~~~~~W~~~~~~p~~r~~~~-~~~~~~~iyv~GG~~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~ 147 (306)
T 3ii7_A 69 IKRMDCYNVVKDSWYSKLGPPTPRDSLA-ACAAEGKIYTSGGSEVGNSALYLFECYDTRTESWHTKPSMLTQRCSHGMVE 147 (306)
T ss_dssp CCEEEEEETTTTEEEEEECCSSCCBSCE-EEEETTEEEEECCBBTTBSCCCCEEEEETTTTEEEEECCCSSCCBSCEEEE
T ss_pred cceEEEEeCCCCeEEECCCCCcccccee-EEEECCEEEEECCCCCCCcEeeeEEEEeCCCCceEeCCCCcCCcceeEEEE
Confidence 4668999999999999985445555554 677899999999863233346789999999999999999988887777666
Q ss_pred EcCCCcEEEEcC------------eEEEEEcCCCccccccccCCCCCCCc---ccccCceEEEeecCCCcCCcceeeEee
Q 041767 128 VDSLNKVMVLTE------------LAALFFSNSNHWLKFSSNLPSKPRSP---ILMLNSVYALCDVGSPWRSQWKLFCCN 192 (341)
Q Consensus 128 ~~~~~ki~~~g~------------~~evYd~~t~~W~~~~~~~p~~~r~~---~~~~~~~y~~~~~G~~~~~~~~~~~~~ 192 (341)
. +++||++|+ .+++||+.+++|+.++. +|. +|.. +..++.+|++ || ....
T Consensus 148 ~--~~~iyv~GG~~~~~~~~~~~~~~~~yd~~~~~W~~~~~-~p~-~r~~~~~~~~~~~i~v~--GG---------~~~~ 212 (306)
T 3ii7_A 148 A--NGLIYVCGGSLGNNVSGRVLNSCEVYDPATETWTELCP-MIE-ARKNHGLVFVKDKIFAV--GG---------QNGL 212 (306)
T ss_dssp E--TTEEEEECCEESCTTTCEECCCEEEEETTTTEEEEECC-CSS-CCBSCEEEEETTEEEEE--CC---------EETT
T ss_pred E--CCEEEEECCCCCCCCcccccceEEEeCCCCCeEEECCC-ccc-hhhcceEEEECCEEEEE--eC---------CCCC
Confidence 5 689999973 48999999999999984 774 3332 2345567776 33 1110
Q ss_pred cccCCCCceeEEEcccccccccccc---cCCccEEEEeCCEEEEEEeeccccccccccceEEEEEEeCCCCcEEEeccCC
Q 041767 193 LSSLTNSQQFWHCLERREWGDVFDI---LKRPRLVRGVGNRILMIGGLKSSFTLNASCSTILILRLDLDLLEWEEAGRMP 269 (341)
Q Consensus 193 ~~~~~~~~v~~yD~~~~~W~~~~~~---~~~~~lv~~~~g~l~vvgg~~~~~~~~~~~~~~~vw~~d~~~~~W~~~~~mp 269 (341)
.....++.||+++++|+.++.. ...+.++.. +++||++||.... .... ++|.||+++++|+++..||
T Consensus 213 ---~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~-~~~i~v~GG~~~~----~~~~--~~~~yd~~~~~W~~~~~~~ 282 (306)
T 3ii7_A 213 ---GGLDNVEYYDIKLNEWKMVSPMPWKGVTVKCAAV-GSIVYVLAGFQGV----GRLG--HILEYNTETDKWVANSKVR 282 (306)
T ss_dssp ---EEBCCEEEEETTTTEEEECCCCSCCBSCCEEEEE-TTEEEEEECBCSS----SBCC--EEEEEETTTTEEEEEEEEE
T ss_pred ---CCCceEEEeeCCCCcEEECCCCCCCccceeEEEE-CCEEEEEeCcCCC----eeee--eEEEEcCCCCeEEeCCCcc
Confidence 1124689999999999998632 223456664 8999999997643 1122 5889999999999999888
Q ss_pred HHH
Q 041767 270 VEM 272 (341)
Q Consensus 270 ~~~ 272 (341)
.++
T Consensus 283 ~~r 285 (306)
T 3ii7_A 283 AFP 285 (306)
T ss_dssp CCS
T ss_pred ccc
Confidence 553
No 9
>2xn4_A Kelch-like protein 2; structural protein, cytoskeleton; 1.99A {Homo sapiens}
Probab=99.88 E-value=1.5e-21 Score=173.43 Aligned_cols=198 Identities=17% Similarity=0.219 Sum_probs=144.6
Q ss_pred CceEEEeeCCCCcEEEeeCCCCCCCCcceeeccCCEEEEecCCCCCCCCCceEEEEcCcccceecCCCCCCCCceeEEEE
Q 041767 48 AAALHVYDPNQNQWLRFDLSFLPFRSLHPVASSPGLIYLWGDLPDSPESNKSLIACNPLTRLYRVLPQLGSAWSKHGSVL 127 (341)
Q Consensus 48 ~~~~~~yd~~~~~W~~l~~~~~p~~~~~~~~~~~glv~~~g~~~~~~~~~~~~~v~nP~t~~w~~lp~~~~~~~~~~~~~ 127 (341)
...++.||+.+++|..++.+..++..+. +++.+|.||+.||... ....+.+++|||.|++|+.+++|+.+|..+++++
T Consensus 76 ~~~~~~~d~~~~~W~~~~~~p~~r~~~~-~~~~~~~iyv~GG~~~-~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~ 153 (302)
T 2xn4_A 76 VRTVDSYDPVKDQWTSVANMRDRRSTLG-AAVLNGLLYAVGGFDG-STGLSSVEAYNIKSNEWFHVAPMNTRRSSVGVGV 153 (302)
T ss_dssp CCCEEEEETTTTEEEEECCCSSCCBSCE-EEEETTEEEEEEEECS-SCEEEEEEEEETTTTEEEEECCCSSCCBSCEEEE
T ss_pred ccceEEECCCCCceeeCCCCCccccceE-EEEECCEEEEEcCCCC-CccCceEEEEeCCCCeEeecCCCCCcccCceEEE
Confidence 3568999999999999985545555554 6778999999988522 2234689999999999999999988887777666
Q ss_pred EcCCCcEEEEcC----------eEEEEEcCCCccccccccCCCCCCCc---ccccCceEEEeecCCCcCCcceeeEeecc
Q 041767 128 VDSLNKVMVLTE----------LAALFFSNSNHWLKFSSNLPSKPRSP---ILMLNSVYALCDVGSPWRSQWKLFCCNLS 194 (341)
Q Consensus 128 ~~~~~ki~~~g~----------~~evYd~~t~~W~~~~~~~p~~~r~~---~~~~~~~y~~~~~G~~~~~~~~~~~~~~~ 194 (341)
. +++||++|+ .+++||+.+++|+.++. +|. +|.. +..++.+|++ ||. ..
T Consensus 154 ~--~~~iyv~GG~~~~~~~~~~~~~~yd~~~~~W~~~~~-~p~-~r~~~~~~~~~~~iyv~--GG~------------~~ 215 (302)
T 2xn4_A 154 V--GGLLYAVGGYDVASRQCLSTVECYNATTNEWTYIAE-MST-RRSGAGVGVLNNLLYAV--GGH------------DG 215 (302)
T ss_dssp E--TTEEEEECCEETTTTEECCCEEEEETTTTEEEEECC-CSS-CCBSCEEEEETTEEEEE--CCB------------SS
T ss_pred E--CCEEEEEeCCCCCCCccccEEEEEeCCCCcEEECCC-Ccc-ccccccEEEECCEEEEE--CCC------------CC
Confidence 5 689999973 48999999999999984 774 3332 2345567776 331 01
Q ss_pred cCCCCceeEEEcccccccccccc---cCCccEEEEeCCEEEEEEeeccccccccccceEEEEEEeCCCCcEEEec-cCCH
Q 041767 195 SLTNSQQFWHCLERREWGDVFDI---LKRPRLVRGVGNRILMIGGLKSSFTLNASCSTILILRLDLDLLEWEEAG-RMPV 270 (341)
Q Consensus 195 ~~~~~~v~~yD~~~~~W~~~~~~---~~~~~lv~~~~g~l~vvgg~~~~~~~~~~~~~~~vw~~d~~~~~W~~~~-~mp~ 270 (341)
....+.++.||+++++|+.++.. ...+.++.. +++||++||.... ... -.||.||+++++|+++. .||.
T Consensus 216 ~~~~~~~~~yd~~~~~W~~~~~~~~~r~~~~~~~~-~~~i~v~GG~~~~----~~~--~~v~~yd~~~~~W~~~~~~~~~ 288 (302)
T 2xn4_A 216 PLVRKSVEVYDPTTNAWRQVADMNMCRRNAGVCAV-NGLLYVVGGDDGS----CNL--ASVEYYNPTTDKWTVVSSCMST 288 (302)
T ss_dssp SSBCCCEEEEETTTTEEEEECCCSSCCBSCEEEEE-TTEEEEECCBCSS----SBC--CCEEEEETTTTEEEECSSCCSS
T ss_pred CcccceEEEEeCCCCCEeeCCCCCCccccCeEEEE-CCEEEEECCcCCC----ccc--ccEEEEcCCCCeEEECCcccCc
Confidence 11124699999999999988632 223455664 8999999997542 111 24788899999999997 7886
Q ss_pred HH
Q 041767 271 EM 272 (341)
Q Consensus 271 ~~ 272 (341)
++
T Consensus 289 ~r 290 (302)
T 2xn4_A 289 GR 290 (302)
T ss_dssp CC
T ss_pred cc
Confidence 53
No 10
>1zgk_A Kelch-like ECH-associated protein 1; beta-propeller, kelch repeat motif, protein binding; HET: MSE; 1.35A {Homo sapiens} SCOP: b.68.11.1 PDB: 2flu_X 1u6d_X 1x2j_A 1x2r_A 2dyh_A 2z32_A 3ade_A
Probab=99.88 E-value=2.2e-21 Score=173.07 Aligned_cols=198 Identities=19% Similarity=0.249 Sum_probs=146.1
Q ss_pred CceEEEeeCCCCcEEEeeCCCCCCCCcceeeccCCEEEEecCCCCCCCCCceEEEEcCcccceecCCCCCCCCceeEEEE
Q 041767 48 AAALHVYDPNQNQWLRFDLSFLPFRSLHPVASSPGLIYLWGDLPDSPESNKSLIACNPLTRLYRVLPQLGSAWSKHGSVL 127 (341)
Q Consensus 48 ~~~~~~yd~~~~~W~~l~~~~~p~~~~~~~~~~~glv~~~g~~~~~~~~~~~~~v~nP~t~~w~~lp~~~~~~~~~~~~~ 127 (341)
...++.||+.+++|..++.+..++..+. +++.+|.||+.||... ....+.+++|||.|++|..+++|+.+|..+++++
T Consensus 89 ~~~~~~~d~~~~~W~~~~~~p~~r~~~~-~~~~~~~iyv~GG~~~-~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~ 166 (308)
T 1zgk_A 89 SSALDCYNPMTNQWSPCAPMSVPRNRIG-VGVIDGHIYAVGGSHG-CIHHNSVERYEPERDEWHLVAPMLTRRIGVGVAV 166 (308)
T ss_dssp CCCEEEEETTTTEEEECCCCSSCCBTCE-EEEETTEEEEECCEET-TEECCCEEEEETTTTEEEECCCCSSCCBSCEEEE
T ss_pred cceEEEECCCCCeEeECCCCCcCccccE-EEEECCEEEEEcCCCC-CcccccEEEECCCCCeEeECCCCCccccceEEEE
Confidence 3568999999999999985445555554 6777999999988521 1235679999999999999999988887777666
Q ss_pred EcCCCcEEEEcC--------eEEEEEcCCCccccccccCCCCCCCc---ccccCceEEEeecCCCcCCcceeeEeecccC
Q 041767 128 VDSLNKVMVLTE--------LAALFFSNSNHWLKFSSNLPSKPRSP---ILMLNSVYALCDVGSPWRSQWKLFCCNLSSL 196 (341)
Q Consensus 128 ~~~~~ki~~~g~--------~~evYd~~t~~W~~~~~~~p~~~r~~---~~~~~~~y~~~~~G~~~~~~~~~~~~~~~~~ 196 (341)
. +++||++|+ .+++||+.+++|+.++. +|. +|.. +..++.+|++ ||. . ...
T Consensus 167 ~--~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~-~p~-~r~~~~~~~~~~~iyv~--GG~---------~---~~~ 228 (308)
T 1zgk_A 167 L--NRLLYAVGGFDGTNRLNSAECYYPERNEWRMITA-MNT-IRSGAGVCVLHNCIYAA--GGY---------D---GQD 228 (308)
T ss_dssp E--TTEEEEECCBCSSCBCCCEEEEETTTTEEEECCC-CSS-CCBSCEEEEETTEEEEE--CCB---------C---SSS
T ss_pred E--CCEEEEEeCCCCCCcCceEEEEeCCCCeEeeCCC-CCC-ccccceEEEECCEEEEE--eCC---------C---CCC
Confidence 5 689999973 59999999999999984 774 3332 2345567776 331 0 111
Q ss_pred CCCceeEEEcccccccccccc---cCCccEEEEeCCEEEEEEeeccccccccccceEEEEEEeCCCCcEEEeccCCHHH
Q 041767 197 TNSQQFWHCLERREWGDVFDI---LKRPRLVRGVGNRILMIGGLKSSFTLNASCSTILILRLDLDLLEWEEAGRMPVEM 272 (341)
Q Consensus 197 ~~~~v~~yD~~~~~W~~~~~~---~~~~~lv~~~~g~l~vvgg~~~~~~~~~~~~~~~vw~~d~~~~~W~~~~~mp~~~ 272 (341)
....++.||+++++|+.++.. ...+.++.. +++||++||.... ... -++|.||+++++|++++.||.++
T Consensus 229 ~~~~v~~yd~~~~~W~~~~~~p~~r~~~~~~~~-~~~i~v~GG~~~~----~~~--~~v~~yd~~~~~W~~~~~~p~~r 300 (308)
T 1zgk_A 229 QLNSVERYDVETETWTFVAPMKHRRSALGITVH-QGRIYVLGGYDGH----TFL--DSVECYDPDTDTWSEVTRMTSGR 300 (308)
T ss_dssp BCCCEEEEETTTTEEEECCCCSSCCBSCEEEEE-TTEEEEECCBCSS----CBC--CEEEEEETTTTEEEEEEECSSCC
T ss_pred ccceEEEEeCCCCcEEECCCCCCCccceEEEEE-CCEEEEEcCcCCC----ccc--ceEEEEcCCCCEEeecCCCCCCc
Confidence 134799999999999988632 223455664 8999999997542 112 26789999999999999998764
No 11
>2uvk_A YJHT; unknown function, hypothetical protein, sialic acid metabolism, kelch repeat, beta-propeller; HET: MSE; 1.50A {Escherichia coli}
Probab=99.87 E-value=2e-21 Score=176.81 Aligned_cols=224 Identities=11% Similarity=0.109 Sum_probs=143.9
Q ss_pred eeeccCCEEEEecCCCCCCCCCceEEEEcCc--ccceecCCCCC-CCCceeEEEEEcCCCcEEEEcC-------------
Q 041767 76 PVASSPGLIYLWGDLPDSPESNKSLIACNPL--TRLYRVLPQLG-SAWSKHGSVLVDSLNKVMVLTE------------- 139 (341)
Q Consensus 76 ~~~~~~glv~~~g~~~~~~~~~~~~~v~nP~--t~~w~~lp~~~-~~~~~~~~~~~~~~~ki~~~g~------------- 139 (341)
.++..++.||+.||.. .+.+++||+. +++|+.+++|+ .+|..+++++. +++||++|+
T Consensus 14 ~~~~~~~~iyv~GG~~-----~~~~~~~d~~~~~~~W~~~~~~p~~~R~~~~~~~~--~~~lyv~GG~~~~~~~~~~~~~ 86 (357)
T 2uvk_A 14 TGAIDNDTVYIGLGSA-----GTAWYKLDTQAKDKKWTALAAFPGGPRDQATSAFI--DGNLYVFGGIGKNSEGLTQVFN 86 (357)
T ss_dssp EEEEETTEEEEECGGG-----TTCEEEEETTSSSCCEEECCCCTTCCCBSCEEEEE--TTEEEEECCEEECTTSCEEECC
T ss_pred EEEEECCEEEEEeCcC-----CCeEEEEccccCCCCeeECCCCCCCcCccceEEEE--CCEEEEEcCCCCCCCccceeec
Confidence 3566699999999851 3589999998 59999999998 78877776666 689999874
Q ss_pred eEEEEEcCCCccccccccCCCCCCCc---ccccCceEEEeecCCCcCCcc-ee--------------------eEe--ec
Q 041767 140 LAALFFSNSNHWLKFSSNLPSKPRSP---ILMLNSVYALCDVGSPWRSQW-KL--------------------FCC--NL 193 (341)
Q Consensus 140 ~~evYd~~t~~W~~~~~~~p~~~r~~---~~~~~~~y~~~~~G~~~~~~~-~~--------------------~~~--~~ 193 (341)
.+++||+.+++|+.++. ++..+|.. +...+.+|++ ||.-- ... .. ++. ..
T Consensus 87 ~v~~yd~~~~~W~~~~~-~~p~~r~~~~~~~~~~~iyv~--GG~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 162 (357)
T 2uvk_A 87 DVHKYNPKTNSWVKLMS-HAPMGMAGHVTFVHNGKAYVT--GGVNQ-NIFNGYFEDLNEAGKDSTAIDKINAHYFDKKAE 162 (357)
T ss_dssp CEEEEETTTTEEEECSC-CCSSCCSSEEEEEETTEEEEE--ECCCH-HHHHHHHHHHHHHTTCHHHHHHHHHHHHSSCGG
T ss_pred cEEEEeCCCCcEEECCC-CCCcccccceEEEECCEEEEE--eCcCC-CcCcccccchhhcCCcccchhhhhhhhcccccc
Confidence 38999999999999984 66233432 2345677776 34100 000 00 000 00
Q ss_pred ccCCCCceeEEEccccccccccccc---CC-ccEEEEeCCEEEEEEeeccccccccccceEEEEEEeCCCCcEEEeccCC
Q 041767 194 SSLTNSQQFWHCLERREWGDVFDIL---KR-PRLVRGVGNRILMIGGLKSSFTLNASCSTILILRLDLDLLEWEEAGRMP 269 (341)
Q Consensus 194 ~~~~~~~v~~yD~~~~~W~~~~~~~---~~-~~lv~~~~g~l~vvgg~~~~~~~~~~~~~~~vw~~d~~~~~W~~~~~mp 269 (341)
.....+.+++||+++++|+.++... .. +.++.. +++||++||..... .....+.++.+|+++++|+++..||
T Consensus 163 ~~~~~~~v~~yd~~~~~W~~~~~~p~~~~~~~~~~~~-~~~iyv~GG~~~~~---~~~~~v~~~d~d~~~~~W~~~~~~~ 238 (357)
T 2uvk_A 163 DYFFNKFLLSFDPSTQQWSYAGESPWYGTAGAAVVNK-GDKTWLINGEAKPG---LRTDAVFELDFTGNNLKWNKLAPVS 238 (357)
T ss_dssp GGCCCCEEEEEETTTTEEEEEEECSSCCCBSCEEEEE-TTEEEEECCEEETT---EECCCEEEEECC---CEEEECCCSS
T ss_pred ccCCcccEEEEeCCCCcEEECCCCCCCCcccccEEEE-CCEEEEEeeecCCC---cccCceEEEEecCCCCcEEecCCCC
Confidence 0001247999999999999886322 22 455664 99999999975421 1112233344455899999999987
Q ss_pred HHHHHhhcCCCceEEEecCCEEEEEEccc----------------------CcEEEEEeeeCCCCeeEEcCCCCC
Q 041767 270 VEMYRCFSESSKFKVFGMGDKVCFSAKRV----------------------GRLALWECEKGGGGEWRWIDGLPG 322 (341)
Q Consensus 270 ~~~~~~~~~~~~~~~~~~~~~i~~~~~~~----------------------~~v~~yD~~~~~~~~W~~~~~~~~ 322 (341)
.++.+. ...++..+++||+.++.. ..+.+||+. +++|+.++.+|.
T Consensus 239 ~~~~~~-----~~~~~~~~~~iyv~GG~~~~~~~~~~~~g~~~~~~~~~~~~~~~~yd~~---~~~W~~~~~~p~ 305 (357)
T 2uvk_A 239 SPDGVA-----GGFAGISNDSLIFAGGAGFKGSRENYQNGKNYAHEGLKKSYSTDIHLWH---NGKWDKSGELSQ 305 (357)
T ss_dssp TTTCCB-----SCEEEEETTEEEEECCEECTTHHHHHHTTCSSTTTTCCCEECCEEEECC------CEEEEECSS
T ss_pred CCcccc-----cceEEEECCEEEEEcCccccCCcccccccceeccccccceeeEEEEecC---CCceeeCCCCCC
Confidence 653221 123455678898877531 257899999 999999988874
No 12
>2vpj_A Kelch-like protein 12; adaptor protein, WNT signaling pathway, protein-binding, UBI degradation, UBL conjugation pathway, CUL3, kelch repeat; 1.85A {Homo sapiens}
Probab=99.87 E-value=9e-21 Score=168.33 Aligned_cols=198 Identities=15% Similarity=0.208 Sum_probs=145.7
Q ss_pred CceEEEeeCCCCc---EEEeeCCCCCCCCcceeeccCCEEEEecCCCCCCCCCceEEEEcCcccceecCCCCCCCCceeE
Q 041767 48 AAALHVYDPNQNQ---WLRFDLSFLPFRSLHPVASSPGLIYLWGDLPDSPESNKSLIACNPLTRLYRVLPQLGSAWSKHG 124 (341)
Q Consensus 48 ~~~~~~yd~~~~~---W~~l~~~~~p~~~~~~~~~~~glv~~~g~~~~~~~~~~~~~v~nP~t~~w~~lp~~~~~~~~~~ 124 (341)
...++.||+.+++ |..++....++..+. ++..+|.||+.||... ....+.+++|||.+++|..+++|+.+|..++
T Consensus 77 ~~~~~~~d~~~~~~~~W~~~~~~p~~r~~~~-~~~~~~~lyv~GG~~~-~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~ 154 (301)
T 2vpj_A 77 LSSVECLDYTADEDGVWYSVAPMNVRRGLAG-ATTLGDMIYVSGGFDG-SRRHTSMERYDPNIDQWSMLGDMQTAREGAG 154 (301)
T ss_dssp CCCEEEEETTCCTTCCCEEECCCSSCCBSCE-EEEETTEEEEECCBCS-SCBCCEEEEEETTTTEEEEEEECSSCCBSCE
T ss_pred CceEEEEECCCCCCCeeEECCCCCCCcccee-EEEECCEEEEEcccCC-CcccceEEEEcCCCCeEEECCCCCCCcccce
Confidence 3568999999999 999975445555554 6777999999988632 2235789999999999999999988887777
Q ss_pred EEEEcCCCcEEEEc--------CeEEEEEcCCCccccccccCCCCCCCc---ccccCceEEEeecCCCcCCcceeeEeec
Q 041767 125 SVLVDSLNKVMVLT--------ELAALFFSNSNHWLKFSSNLPSKPRSP---ILMLNSVYALCDVGSPWRSQWKLFCCNL 193 (341)
Q Consensus 125 ~~~~~~~~ki~~~g--------~~~evYd~~t~~W~~~~~~~p~~~r~~---~~~~~~~y~~~~~G~~~~~~~~~~~~~~ 193 (341)
+++. +++||++| +.+++||+.+++|+.++. +|. +|.. +..++.+|++ ||. .
T Consensus 155 ~~~~--~~~iyv~GG~~~~~~~~~~~~~d~~~~~W~~~~~-~p~-~r~~~~~~~~~~~i~v~--GG~---------~--- 216 (301)
T 2vpj_A 155 LVVA--SGVIYCLGGYDGLNILNSVEKYDPHTGHWTNVTP-MAT-KRSGAGVALLNDHIYVV--GGF---------D--- 216 (301)
T ss_dssp EEEE--TTEEEEECCBCSSCBCCCEEEEETTTTEEEEECC-CSS-CCBSCEEEEETTEEEEE--CCB---------C---
T ss_pred EEEE--CCEEEEECCCCCCcccceEEEEeCCCCcEEeCCC-CCc-ccccceEEEECCEEEEE--eCC---------C---
Confidence 6665 68999997 369999999999999984 774 3332 2344566766 331 0
Q ss_pred ccCCCCceeEEEcccccccccccc---cCCccEEEEeCCEEEEEEeeccccccccccceEEEEEEeCCCCcEEEeccCCH
Q 041767 194 SSLTNSQQFWHCLERREWGDVFDI---LKRPRLVRGVGNRILMIGGLKSSFTLNASCSTILILRLDLDLLEWEEAGRMPV 270 (341)
Q Consensus 194 ~~~~~~~v~~yD~~~~~W~~~~~~---~~~~~lv~~~~g~l~vvgg~~~~~~~~~~~~~~~vw~~d~~~~~W~~~~~mp~ 270 (341)
.....+.++.||+++++|+.++.. ...+.++.. +++||++||.... . ..-.||.||+++++|+++..||.
T Consensus 217 ~~~~~~~v~~yd~~~~~W~~~~~~p~~r~~~~~~~~-~~~i~v~GG~~~~----~--~~~~v~~yd~~~~~W~~~~~~~~ 289 (301)
T 2vpj_A 217 GTAHLSSVEAYNIRTDSWTTVTSMTTPRCYVGATVL-RGRLYAIAGYDGN----S--LLSSIECYDPIIDSWEVVTSMGT 289 (301)
T ss_dssp SSSBCCCEEEEETTTTEEEEECCCSSCCBSCEEEEE-TTEEEEECCBCSS----S--BEEEEEEEETTTTEEEEEEEEEE
T ss_pred CCcccceEEEEeCCCCcEEECCCCCCcccceeEEEE-CCEEEEEcCcCCC----c--ccccEEEEcCCCCeEEEcCCCCc
Confidence 111134799999999999988632 223455654 8999999997542 1 12368899999999999999886
Q ss_pred HH
Q 041767 271 EM 272 (341)
Q Consensus 271 ~~ 272 (341)
++
T Consensus 290 ~r 291 (301)
T 2vpj_A 290 QR 291 (301)
T ss_dssp EE
T ss_pred cc
Confidence 53
No 13
>4asc_A Kelch repeat and BTB domain-containing protein 5; protein binding, cytoskeleton; 1.78A {Homo sapiens}
Probab=99.87 E-value=8.8e-21 Score=169.64 Aligned_cols=201 Identities=16% Similarity=0.172 Sum_probs=142.7
Q ss_pred ceEEEeeCCCCcEEEeeCCCCCCCCcceeeccCCEEEEecCCC--CCCCCCceEEEEcCcccceecCCCCCCCCceeEEE
Q 041767 49 AALHVYDPNQNQWLRFDLSFLPFRSLHPVASSPGLIYLWGDLP--DSPESNKSLIACNPLTRLYRVLPQLGSAWSKHGSV 126 (341)
Q Consensus 49 ~~~~~yd~~~~~W~~l~~~~~p~~~~~~~~~~~glv~~~g~~~--~~~~~~~~~~v~nP~t~~w~~lp~~~~~~~~~~~~ 126 (341)
..+..||+.+++|..++.+..++..+. +++.+|.||+.||.. ......+.+++|||.|++|+.+++|+.+|..++++
T Consensus 67 ~~~~~~d~~~~~W~~~~~~p~~r~~~~-~~~~~~~lyv~GG~~~~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~ 145 (315)
T 4asc_A 67 AYFLQFDHLDSEWLGMPPLPSPRCLFG-LGEALNSIYVVGGREIKDGERCLDSVMCYDRLSFKWGESDPLPYVVYGHTVL 145 (315)
T ss_dssp EEEEEEETTTTEEEECCCBSSCEESCE-EEEETTEEEEECCEESSTTCCBCCCEEEEETTTTEEEECCCCSSCCBSCEEE
T ss_pred cceEEecCCCCeEEECCCCCcchhcee-EEEECCEEEEEeCCcCCCCCcccceEEEECCCCCcEeECCCCCCcccceeEE
Confidence 347899999999999875444554554 777899999999842 12334678999999999999999998888777766
Q ss_pred EEcCCCcEEEEcC---------eEEEEEcCCCccccccccCCCCCCCc---ccccCceEEEeecCCCcCCcceeeEeecc
Q 041767 127 LVDSLNKVMVLTE---------LAALFFSNSNHWLKFSSNLPSKPRSP---ILMLNSVYALCDVGSPWRSQWKLFCCNLS 194 (341)
Q Consensus 127 ~~~~~~ki~~~g~---------~~evYd~~t~~W~~~~~~~p~~~r~~---~~~~~~~y~~~~~G~~~~~~~~~~~~~~~ 194 (341)
+. +++||++|+ .+++||+.+++|+.++. +|. +|.. +..++.+|++ ||. . .
T Consensus 146 ~~--~~~iyv~GG~~~~~~~~~~~~~yd~~~~~W~~~~~-~p~-~r~~~~~~~~~~~iyv~--GG~---------~---~ 207 (315)
T 4asc_A 146 SH--MDLVYVIGGKGSDRKCLNKMCVYDPKKFEWKELAP-MQT-ARSLFGATVHDGRIIVA--AGV---------T---D 207 (315)
T ss_dssp EE--TTEEEEECCBCTTSCBCCCEEEEETTTTEEEECCC-CSS-CCBSCEEEEETTEEEEE--EEE---------C---S
T ss_pred EE--CCEEEEEeCCCCCCcccceEEEEeCCCCeEEECCC-CCC-chhceEEEEECCEEEEE--ecc---------C---C
Confidence 65 689999983 59999999999999984 774 3432 2344566766 230 0 0
Q ss_pred cCCCCceeEEEcccccccccccc---cCCccEEEEeCCEEEEEEeeccccccccc---cceEEEEEEeCCCCcEEEeccC
Q 041767 195 SLTNSQQFWHCLERREWGDVFDI---LKRPRLVRGVGNRILMIGGLKSSFTLNAS---CSTILILRLDLDLLEWEEAGRM 268 (341)
Q Consensus 195 ~~~~~~v~~yD~~~~~W~~~~~~---~~~~~lv~~~~g~l~vvgg~~~~~~~~~~---~~~~~vw~~d~~~~~W~~~~~m 268 (341)
....+.+++||+++++|+.++.. ...+.++.. +++||++||.......++. ...-+||.||+++++|+++..+
T Consensus 208 ~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~-~~~l~v~GG~~~~~~~~~~~~~~~~~~v~~yd~~~~~W~~~~~~ 286 (315)
T 4asc_A 208 TGLTSSAEVYSITDNKWAPFEAFPQERSSLSLVSL-VGTLYAIGGFATLETESGELVPTELNDIWRYNEEEKKWEGVLRE 286 (315)
T ss_dssp SSEEEEEEEEETTTTEEEEECCCSSCCBSCEEEEE-TTEEEEEEEEEEEECTTSCEEEEEEEEEEEEETTTTEEEEEESC
T ss_pred CCccceEEEEECCCCeEEECCCCCCcccceeEEEE-CCEEEEECCccccCcCCccccccccCcEEEecCCCChhhhhccC
Confidence 01123689999999999998632 223456664 8999999998531000000 1124689999999999999544
Q ss_pred C
Q 041767 269 P 269 (341)
Q Consensus 269 p 269 (341)
|
T Consensus 287 ~ 287 (315)
T 4asc_A 287 I 287 (315)
T ss_dssp S
T ss_pred C
Confidence 4
No 14
>2woz_A Kelch repeat and BTB domain-containing protein 10; protein binding, invasion and metastasis, UBL conjugation pathway, UBL protein folding; 2.00A {Rattus norvegicus}
Probab=99.86 E-value=3.7e-21 Score=172.34 Aligned_cols=201 Identities=13% Similarity=0.144 Sum_probs=141.0
Q ss_pred eEEEeeCCCCcEEEeeCCCCCCCCcceeeccCCEEEEecCCCC-CCCCCceEEEEcCcccceecCCCCCCCCceeEEEEE
Q 041767 50 ALHVYDPNQNQWLRFDLSFLPFRSLHPVASSPGLIYLWGDLPD-SPESNKSLIACNPLTRLYRVLPQLGSAWSKHGSVLV 128 (341)
Q Consensus 50 ~~~~yd~~~~~W~~l~~~~~p~~~~~~~~~~~glv~~~g~~~~-~~~~~~~~~v~nP~t~~w~~lp~~~~~~~~~~~~~~ 128 (341)
.+..||+.+++|..++.+..++..+. +++.++.||+.||... .....+.+++|||.|++|..+++|+.+|..+++++.
T Consensus 79 ~~~~~d~~~~~W~~~~~~p~~r~~~~-~~~~~~~iyv~GG~~~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~ 157 (318)
T 2woz_A 79 YFFQLDNVSSEWVGLPPLPSARCLFG-LGEVDDKIYVVAGKDLQTEASLDSVLCYDPVAAKWSEVKNLPIKVYGHNVISH 157 (318)
T ss_dssp EEEEEETTTTEEEECSCBSSCBCSCE-EEEETTEEEEEEEEBTTTCCEEEEEEEEETTTTEEEEECCCSSCEESCEEEEE
T ss_pred cEEEEeCCCCcEEECCCCCccccccc-eEEECCEEEEEcCccCCCCcccceEEEEeCCCCCEeECCCCCCcccccEEEEE
Confidence 47899999999999875444555554 6778999999988521 122356799999999999999999888777766555
Q ss_pred cCCCcEEEEcC---------eEEEEEcCCCccccccccCCCCCCCc---ccccCceEEEeecCCCcCCcceeeEeecccC
Q 041767 129 DSLNKVMVLTE---------LAALFFSNSNHWLKFSSNLPSKPRSP---ILMLNSVYALCDVGSPWRSQWKLFCCNLSSL 196 (341)
Q Consensus 129 ~~~~ki~~~g~---------~~evYd~~t~~W~~~~~~~p~~~r~~---~~~~~~~y~~~~~G~~~~~~~~~~~~~~~~~ 196 (341)
+++||++|+ .+++||+.+++|+.++. +|. +|.. +..++.+|++ || ... ..
T Consensus 158 --~~~iyv~GG~~~~~~~~~~~~~yd~~~~~W~~~~~-~p~-~r~~~~~~~~~~~iyv~--GG---------~~~---~~ 219 (318)
T 2woz_A 158 --NGMIYCLGGKTDDKKCTNRVFIYNPKKGDWKDLAP-MKT-PRSMFGVAIHKGKIVIA--GG---------VTE---DG 219 (318)
T ss_dssp --TTEEEEECCEESSSCBCCCEEEEETTTTEEEEECC-CSS-CCBSCEEEEETTEEEEE--EE---------EET---TE
T ss_pred --CCEEEEEcCCCCCCCccceEEEEcCCCCEEEECCC-CCC-CcccceEEEECCEEEEE--cC---------cCC---CC
Confidence 689999983 48999999999999984 773 3432 2344567776 23 110 00
Q ss_pred CCCceeEEEcccccccccccc---cCCccEEEEeCCEEEEEEeecccccccc---ccceEEEEEEeCCCCcEEEeccCCH
Q 041767 197 TNSQQFWHCLERREWGDVFDI---LKRPRLVRGVGNRILMIGGLKSSFTLNA---SCSTILILRLDLDLLEWEEAGRMPV 270 (341)
Q Consensus 197 ~~~~v~~yD~~~~~W~~~~~~---~~~~~lv~~~~g~l~vvgg~~~~~~~~~---~~~~~~vw~~d~~~~~W~~~~~mp~ 270 (341)
....++.||+++++|+.++.. ...+.++.. +++||++||.......++ ....-++|.||+++++|+++ +|.
T Consensus 220 ~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~-~~~i~v~GG~~~~~~~~~~~~~~~~~~v~~yd~~~~~W~~~--~~~ 296 (318)
T 2woz_A 220 LSASVEAFDLKTNKWEVMTEFPQERSSISLVSL-AGSLYAIGGFAMIQLESKEFAPTEVNDIWKYEDDKKEWAGM--LKE 296 (318)
T ss_dssp EEEEEEEEETTTCCEEECCCCSSCCBSCEEEEE-TTEEEEECCBCCBC----CCBCCBCCCEEEEETTTTEEEEE--ESC
T ss_pred ccceEEEEECCCCeEEECCCCCCcccceEEEEE-CCEEEEECCeeccCCCCceeccceeeeEEEEeCCCCEehhh--ccc
Confidence 123688999999999998632 223456664 899999999754210000 01123589999999999999 554
Q ss_pred HH
Q 041767 271 EM 272 (341)
Q Consensus 271 ~~ 272 (341)
.+
T Consensus 297 ~r 298 (318)
T 2woz_A 297 IR 298 (318)
T ss_dssp CG
T ss_pred cc
Confidence 43
No 15
>1k3i_A Galactose oxidase precursor; blade beta propeller, prosequence form, precursor of copper enzyme., oxidoreductase; 1.40A {Fusarium SP} SCOP: b.1.18.2 b.18.1.1 b.69.1.1 PDB: 1gof_A 1gog_A 1goh_A 2eie_A 2jkx_A 2vz1_A 2vz3_A 2eic_A 2eib_A 1t2x_A 2eid_A 2wq8_A
Probab=99.83 E-value=2.4e-19 Score=176.00 Aligned_cols=248 Identities=10% Similarity=0.040 Sum_probs=161.6
Q ss_pred ceEEEeeCCCCcEEEeeCCCCCCCCcc--eeeccCCEEEEecCCCCCCCCCceEEEEcCcccceecCCCCCCCCceeEEE
Q 041767 49 AALHVYDPNQNQWLRFDLSFLPFRSLH--PVASSPGLIYLWGDLPDSPESNKSLIACNPLTRLYRVLPQLGSAWSKHGSV 126 (341)
Q Consensus 49 ~~~~~yd~~~~~W~~l~~~~~p~~~~~--~~~~~~glv~~~g~~~~~~~~~~~~~v~nP~t~~w~~lp~~~~~~~~~~~~ 126 (341)
..+..||+.+++|..++.+..++..++ .+...+|.||+.||.. ...+++|||.|++|..+++|+.+|..++++
T Consensus 219 ~~~~~yd~~t~~w~~~~~~~~~~~~~~~~~~~~~~g~lyv~GG~~-----~~~v~~yd~~t~~W~~~~~~~~~R~~~s~~ 293 (656)
T 1k3i_A 219 TLTSSWDPSTGIVSDRTVTVTKHDMFCPGISMDGNGQIVVTGGND-----AKKTSLYDSSSDSWIPGPDMQVARGYQSSA 293 (656)
T ss_dssp EEEEEECTTTCCBCCCEEEECSCCCSSCEEEECTTSCEEEECSSS-----TTCEEEEEGGGTEEEECCCCSSCCSSCEEE
T ss_pred EEEEEEeCCCCcEEeCcccCCCCCCccccccCCCCCCEEEeCCCC-----CCceEEecCcCCceeECCCCCccccccceE
Confidence 357899999999998874333444443 2445789999999852 347999999999999999999888777655
Q ss_pred EEcCCCcEEEEcC---------eEEEEEcCCCccccccc----cCCCCCCCcc-cccCceEEEeecCCCcCCcceeeEee
Q 041767 127 LVDSLNKVMVLTE---------LAALFFSNSNHWLKFSS----NLPSKPRSPI-LMLNSVYALCDVGSPWRSQWKLFCCN 192 (341)
Q Consensus 127 ~~~~~~ki~~~g~---------~~evYd~~t~~W~~~~~----~~p~~~r~~~-~~~~~~y~~~~~G~~~~~~~~~~~~~ 192 (341)
+. .++|||++|+ .+|+||+.+++|+.++. +|+......+ ..++.+|++ +|. .+ +.+..
T Consensus 294 ~~-~dg~iyv~GG~~~~~~~~~~~e~yd~~t~~W~~~~~~~~~p~~~~~~~~~~~~~~~iyv~--Gg~---~g-~~~~~- 365 (656)
T 1k3i_A 294 TM-SDGRVFTIGGSWSGGVFEKNGEVYSPSSKTWTSLPNAKVNPMLTADKQGLYRSDNHAWLF--GWK---KG-SVFQA- 365 (656)
T ss_dssp EC-TTSCEEEECCCCCSSSCCCCEEEEETTTTEEEEETTSCSGGGCCCCTTGGGTTTCSCCEE--ECG---GG-CEEEC-
T ss_pred Ee-cCCeEEEEeCcccCCcccccceEeCCCCCcceeCCCccccccccccccceeecCCceEEE--ECC---CC-cEEEe-
Confidence 54 3689999984 58999999999998731 3443221112 234567776 231 00 01111
Q ss_pred cccCCCCceeEEEccccccccccc---c-------cCCccEEE--EeCCEEEEEEeeccccccccccceEEEEEEeCCCC
Q 041767 193 LSSLTNSQQFWHCLERREWGDVFD---I-------LKRPRLVR--GVGNRILMIGGLKSSFTLNASCSTILILRLDLDLL 260 (341)
Q Consensus 193 ~~~~~~~~v~~yD~~~~~W~~~~~---~-------~~~~~lv~--~~~g~l~vvgg~~~~~~~~~~~~~~~vw~~d~~~~ 260 (341)
.....++.||+++++|..... . ......+. ..+++||++||...............|+.+|++++
T Consensus 366 ---~~~~~v~~yd~~~~~w~~~~~~~~~~~~~~~~~~~~~av~~~~~~~~i~v~GG~~~~~~~~~~~~~~~v~~yd~~~~ 442 (656)
T 1k3i_A 366 ---GPSTAMNWYYTSGSGDVKSAGKRQSNRGVAPDAMCGNAVMYDAVKGKILTFGGSPDYQDSDATTNAHIITLGEPGTS 442 (656)
T ss_dssp ---CSSSEEEEEECSTTCEEEEEEECEETTEECCCCBTCEEEEEETTTTEEEEECCBSSSSSSBCCCCEEEEECCSTTSC
T ss_pred ---cCccceeeeecCCcceeecCCccccccccCCCCCCCceEeccCCCCeEEEEeCCCCCCCCCcCCcceEEEcCCCCCC
Confidence 112468999999999875321 1 01122221 13899999999643100001111225677899999
Q ss_pred cEEEec--cCCHHHHHhhcCCCceEEEec-CCEEEEEEcc-----------cCcEEEEEeeeCCCCeeEEcCCCCC
Q 041767 261 EWEEAG--RMPVEMYRCFSESSKFKVFGM-GDKVCFSAKR-----------VGRLALWECEKGGGGEWRWIDGLPG 322 (341)
Q Consensus 261 ~W~~~~--~mp~~~~~~~~~~~~~~~~~~-~~~i~~~~~~-----------~~~v~~yD~~~~~~~~W~~~~~~~~ 322 (341)
.|+++. .||.++.. ..++.. +++||+.++. ...+++||+. +++|+.++.+|.
T Consensus 443 ~W~~~~~~~mp~~R~~-------~~~~~l~~g~i~v~GG~~~~~~~~~~~~~~~v~~ydp~---t~~W~~~~~~~~ 508 (656)
T 1k3i_A 443 PNTVFASNGLYFARTF-------HTSVVLPDGSTFITGGQRRGIPFEDSTPVFTPEIYVPE---QDTFYKQNPNSI 508 (656)
T ss_dssp CEEEECTTCCSSCCBS-------CEEEECTTSCEEEECCBSBCCTTCCCSBCCCCEEEEGG---GTEEEECCCCSS
T ss_pred CeeEEccCCCCCCccc-------CCeEECCCCCEEEECCcccCcCcCCCCcccceEEEcCC---CCceeecCCCCC
Confidence 999987 88866322 122333 5677776542 2568999999 999999988764
No 16
>2zwa_A Leucine carboxyl methyltransferase 2; HET: SAH CIT; 1.70A {Saccharomyces cerevisiae} PDB: 2zw9_A* 2zzk_A*
Probab=99.79 E-value=5.5e-18 Score=166.97 Aligned_cols=211 Identities=11% Similarity=0.052 Sum_probs=145.2
Q ss_pred CCcceeeccCCEEEEecCCCCCCCCCceEEEEcCcccceecCC-C-----CCCCCceeEEEEEcCCCcEEEEcC------
Q 041767 72 RSLHPVASSPGLIYLWGDLPDSPESNKSLIACNPLTRLYRVLP-Q-----LGSAWSKHGSVLVDSLNKVMVLTE------ 139 (341)
Q Consensus 72 ~~~~~~~~~~glv~~~g~~~~~~~~~~~~~v~nP~t~~w~~lp-~-----~~~~~~~~~~~~~~~~~ki~~~g~------ 139 (341)
..+..+++.++.||+.||... ...+.+++|||.+++|..++ + |+.+|..|++++...+++||++|+
T Consensus 388 rr~g~~~~~~~~iyv~GG~~~--~~~~~v~~yd~~~~~W~~~~~~~p~~~~p~~R~~hs~~~~~~~~~lyv~GG~~~~~~ 465 (695)
T 2zwa_A 388 RKFGDVDVAGNDVFYMGGSNP--YRVNEILQLSIHYDKIDMKNIEVSSSEVPVARMCHTFTTISRNNQLLLIGGRKAPHQ 465 (695)
T ss_dssp CBSCEEEECSSCEEEECCBSS--SBCCCEEEEEECSSCEEEEECCCCCSCCCCCCBSCEEEEETTTTEEEEECCBSSTTC
T ss_pred CceeEEEEECCEEEEECCCCC--CCcCcEEEEECCCCeEEEeccCCCCCCCCccccceEEEEEccCCEEEEEcCCCCCCC
Confidence 344435558999999998632 44678999999999999998 6 666777777666522679999973
Q ss_pred ---eEEEEEcCCCccccccccCCCCCCCc---ccc-cCceEEEeecCCCcCCcceeeEeecccCCCCceeEEEccccccc
Q 041767 140 ---LAALFFSNSNHWLKFSSNLPSKPRSP---ILM-LNSVYALCDVGSPWRSQWKLFCCNLSSLTNSQQFWHCLERREWG 212 (341)
Q Consensus 140 ---~~evYd~~t~~W~~~~~~~p~~~r~~---~~~-~~~~y~~~~~G~~~~~~~~~~~~~~~~~~~~~v~~yD~~~~~W~ 212 (341)
.+++||+.+++|+.++. +|. +|.. +.. ++.+|++ ||. ... ..+++||+++++|+
T Consensus 466 ~~~dv~~yd~~t~~W~~~~~-~p~-~R~~h~~~~~~~~~iyv~--GG~-------------~~~--~~v~~yd~~t~~W~ 526 (695)
T 2zwa_A 466 GLSDNWIFDMKTREWSMIKS-LSH-TRFRHSACSLPDGNVLIL--GGV-------------TEG--PAMLLYNVTEEIFK 526 (695)
T ss_dssp BCCCCEEEETTTTEEEECCC-CSB-CCBSCEEEECTTSCEEEE--CCB-------------CSS--CSEEEEETTTTEEE
T ss_pred ccccEEEEeCCCCcEEECCC-CCC-CcccceEEEEcCCEEEEE--CCC-------------CCC--CCEEEEECCCCceE
Confidence 58999999999999984 774 3432 222 5677776 341 111 15899999999999
Q ss_pred cccc---c---cCCccEEEEeC---CEEEEEEeeccccccccccceEEEEEEeCCCCc------EEEeccCC-HHHHHhh
Q 041767 213 DVFD---I---LKRPRLVRGVG---NRILMIGGLKSSFTLNASCSTILILRLDLDLLE------WEEAGRMP-VEMYRCF 276 (341)
Q Consensus 213 ~~~~---~---~~~~~lv~~~~---g~l~vvgg~~~~~~~~~~~~~~~vw~~d~~~~~------W~~~~~mp-~~~~~~~ 276 (341)
.++. . ...+..+.+ + ++||++||..... .... -++|.||+.+++ |+++..+| .++.
T Consensus 527 ~~~~~g~~p~~r~~~~a~v~-~~~~~~iyv~GG~~~~~--~~~~--~~v~~yd~~~~~w~~~~~W~~~~~~p~~~R~--- 598 (695)
T 2zwa_A 527 DVTPKDEFFQNSLVSAGLEF-DPVSKQGIILGGGFMDQ--TTVS--DKAIIFKYDAENATEPITVIKKLQHPLFQRY--- 598 (695)
T ss_dssp ECCCSSGGGGSCCBSCEEEE-ETTTTEEEEECCBCTTS--SCBC--CEEEEEEECTTCSSCCEEEEEEEECGGGCCB---
T ss_pred EccCCCCCCCcccceeEEEE-eCCCCEEEEECCcCCCC--Ceee--CcEEEEEccCCccccceEEEEcCCCCCCCcc---
Confidence 8762 1 122343443 4 8999999975421 0111 257888998888 99998875 2211
Q ss_pred cCCCceEEEecC-CEEEEEEcc--------cCcEEEEEeeeCCCCeeEEcC
Q 041767 277 SESSKFKVFGMG-DKVCFSAKR--------VGRLALWECEKGGGGEWRWID 318 (341)
Q Consensus 277 ~~~~~~~~~~~~-~~i~~~~~~--------~~~v~~yD~~~~~~~~W~~~~ 318 (341)
...++..+ +.||+.++. ...+.+||+. +++|+.++
T Consensus 599 ----~~~~~~~~~~~iyv~GG~~~~~~~~~~~~v~~yd~~---t~~W~~~~ 642 (695)
T 2zwa_A 599 ----GSQIKYITPRKLLIVGGTSPSGLFDRTNSIISLDPL---SETLTSIP 642 (695)
T ss_dssp ----SCEEEEEETTEEEEECCBCSSCCCCTTTSEEEEETT---TTEEEECC
T ss_pred ----cceEEEeCCCEEEEECCccCCCCCCCCCeEEEEECC---CCeEEEee
Confidence 12334445 888887653 3569999999 99999653
No 17
>2zwa_A Leucine carboxyl methyltransferase 2; HET: SAH CIT; 1.70A {Saccharomyces cerevisiae} PDB: 2zw9_A* 2zzk_A*
Probab=99.78 E-value=2.9e-18 Score=168.97 Aligned_cols=205 Identities=9% Similarity=0.007 Sum_probs=139.8
Q ss_pred CceEEEeeCCCCcEEEee-C-----CCCCCCCcceeecc--CCEEEEecCCCCCCCCCceEEEEcCcccceecCCCCCCC
Q 041767 48 AAALHVYDPNQNQWLRFD-L-----SFLPFRSLHPVASS--PGLIYLWGDLPDSPESNKSLIACNPLTRLYRVLPQLGSA 119 (341)
Q Consensus 48 ~~~~~~yd~~~~~W~~l~-~-----~~~p~~~~~~~~~~--~glv~~~g~~~~~~~~~~~~~v~nP~t~~w~~lp~~~~~ 119 (341)
...++.||+.+++|..++ . +..++..+. +++. +|.||+.||........+.+++|||.|++|..+++|+.+
T Consensus 411 ~~~v~~yd~~~~~W~~~~~~~p~~~~p~~R~~hs-~~~~~~~~~lyv~GG~~~~~~~~~dv~~yd~~t~~W~~~~~~p~~ 489 (695)
T 2zwa_A 411 VNEILQLSIHYDKIDMKNIEVSSSEVPVARMCHT-FTTISRNNQLLLIGGRKAPHQGLSDNWIFDMKTREWSMIKSLSHT 489 (695)
T ss_dssp CCCEEEEEECSSCEEEEECCCCCSCCCCCCBSCE-EEEETTTTEEEEECCBSSTTCBCCCCEEEETTTTEEEECCCCSBC
T ss_pred cCcEEEEECCCCeEEEeccCCCCCCCCccccceE-EEEEccCCEEEEEcCCCCCCCccccEEEEeCCCCcEEECCCCCCC
Confidence 356899999999999998 3 123444554 6666 999999998633222457899999999999999999988
Q ss_pred CceeEEEEEcCCCcEEEEcC-----eEEEEEcCCCccccccc--cCCCCCCCc-c--ccc---CceEEEeecCCCcCCcc
Q 041767 120 WSKHGSVLVDSLNKVMVLTE-----LAALFFSNSNHWLKFSS--NLPSKPRSP-I--LML---NSVYALCDVGSPWRSQW 186 (341)
Q Consensus 120 ~~~~~~~~~~~~~ki~~~g~-----~~evYd~~t~~W~~~~~--~~p~~~r~~-~--~~~---~~~y~~~~~G~~~~~~~ 186 (341)
|..|+++++. +++||++|+ .+++||+.+++|+.+.. .+|. +|.. . ..+ +.+|++ ||.
T Consensus 490 R~~h~~~~~~-~~~iyv~GG~~~~~~v~~yd~~t~~W~~~~~~g~~p~-~r~~~~a~v~~~~~~~iyv~--GG~------ 559 (695)
T 2zwa_A 490 RFRHSACSLP-DGNVLILGGVTEGPAMLLYNVTEEIFKDVTPKDEFFQ-NSLVSAGLEFDPVSKQGIIL--GGG------ 559 (695)
T ss_dssp CBSCEEEECT-TSCEEEECCBCSSCSEEEEETTTTEEEECCCSSGGGG-SCCBSCEEEEETTTTEEEEE--CCB------
T ss_pred cccceEEEEc-CCEEEEECCCCCCCCEEEEECCCCceEEccCCCCCCC-cccceeEEEEeCCCCEEEEE--CCc------
Confidence 8888766542 689999985 69999999999999873 1452 2322 1 223 557776 341
Q ss_pred eeeEeecccCCCCceeEEEccccc------ccccccc----cCCccEEEEeC-CEEEEEEeeccccccccccceEEEEEE
Q 041767 187 KLFCCNLSSLTNSQQFWHCLERRE------WGDVFDI----LKRPRLVRGVG-NRILMIGGLKSSFTLNASCSTILILRL 255 (341)
Q Consensus 187 ~~~~~~~~~~~~~~v~~yD~~~~~------W~~~~~~----~~~~~lv~~~~-g~l~vvgg~~~~~~~~~~~~~~~vw~~ 255 (341)
. .......+.+++||+.+++ |+.+... ...+.++.+ + |+||++||...... ..... .||.|
T Consensus 560 ---~-~~~~~~~~~v~~yd~~~~~w~~~~~W~~~~~~p~~~R~~~~~~~~-~~~~iyv~GG~~~~~~-~~~~~--~v~~y 631 (695)
T 2zwa_A 560 ---F-MDQTTVSDKAIIFKYDAENATEPITVIKKLQHPLFQRYGSQIKYI-TPRKLLIVGGTSPSGL-FDRTN--SIISL 631 (695)
T ss_dssp ---C-TTSSCBCCEEEEEEECTTCSSCCEEEEEEEECGGGCCBSCEEEEE-ETTEEEEECCBCSSCC-CCTTT--SEEEE
T ss_pred ---C-CCCCeeeCcEEEEEccCCccccceEEEEcCCCCCCCcccceEEEe-CCCEEEEECCccCCCC-CCCCC--eEEEE
Confidence 0 0000113468999999999 7766431 123455664 6 99999999754210 01122 47888
Q ss_pred eCCCCcEEEeccCCHHH
Q 041767 256 DLDLLEWEEAGRMPVEM 272 (341)
Q Consensus 256 d~~~~~W~~~~~mp~~~ 272 (341)
|+++++|+. ..+|...
T Consensus 632 d~~t~~W~~-~~~p~~~ 647 (695)
T 2zwa_A 632 DPLSETLTS-IPISRRI 647 (695)
T ss_dssp ETTTTEEEE-CCCCHHH
T ss_pred ECCCCeEEE-eeccccc
Confidence 999999995 4566553
No 18
>1k3i_A Galactose oxidase precursor; blade beta propeller, prosequence form, precursor of copper enzyme., oxidoreductase; 1.40A {Fusarium SP} SCOP: b.1.18.2 b.18.1.1 b.69.1.1 PDB: 1gof_A 1gog_A 1goh_A 2eie_A 2jkx_A 2vz1_A 2vz3_A 2eic_A 2eib_A 1t2x_A 2eid_A 2wq8_A
Probab=99.71 E-value=7.3e-17 Score=158.37 Aligned_cols=249 Identities=14% Similarity=0.135 Sum_probs=155.3
Q ss_pred eEEEeeCCCCcEEEeeCCCCCCCCcceeecc--CCEEEEecCCCCC-----CCCCceEEEEcCcccceecCCCCCCCCce
Q 041767 50 ALHVYDPNQNQWLRFDLSFLPFRSLHPVASS--PGLIYLWGDLPDS-----PESNKSLIACNPLTRLYRVLPQLGSAWSK 122 (341)
Q Consensus 50 ~~~~yd~~~~~W~~l~~~~~p~~~~~~~~~~--~glv~~~g~~~~~-----~~~~~~~~v~nP~t~~w~~lp~~~~~~~~ 122 (341)
.+.+|||.+++|..++. +|+..+. ++.+ +|.||+.||.... ......+.+|||.|++|+.+++|+.++..
T Consensus 167 ~~~~~dp~~~~W~~~~~--~P~~~~~-~av~~~~g~l~v~GG~~~~~~~~~~~~~~~~~~yd~~t~~w~~~~~~~~~~~~ 243 (656)
T 1k3i_A 167 SYTAPQPGLGRWGPTID--LPIVPAA-AAIEPTSGRVLMWSSYRNDAFGGSPGGITLTSSWDPSTGIVSDRTVTVTKHDM 243 (656)
T ss_dssp CCCCCCTTSCEEEEEEE--CSSCCSE-EEEETTTTEEEEEEECCCTTTCSCCCSEEEEEEECTTTCCBCCCEEEECSCCC
T ss_pred ccccCCCCCCeeeeecc--CCCCcee-EEEEecCCEEEEEecccccccccCCCCeEEEEEEeCCCCcEEeCcccCCCCCC
Confidence 35678999999998763 2433444 3333 9999999875321 11234789999999999999998766655
Q ss_pred eE-EEEEcCCCcEEEEcC----eEEEEEcCCCccccccccCCCCCCCc---ccc-cCceEEEeecCCCcCCcceeeEeec
Q 041767 123 HG-SVLVDSLNKVMVLTE----LAALFFSNSNHWLKFSSNLPSKPRSP---ILM-LNSVYALCDVGSPWRSQWKLFCCNL 193 (341)
Q Consensus 123 ~~-~~~~~~~~ki~~~g~----~~evYd~~t~~W~~~~~~~p~~~r~~---~~~-~~~~y~~~~~G~~~~~~~~~~~~~~ 193 (341)
++ .+++..+++||++|+ .+++||+.+++|+.++. ||. +|.. +.. ++++|++ ||. + .
T Consensus 244 ~~~~~~~~~~g~lyv~GG~~~~~v~~yd~~t~~W~~~~~-~~~-~R~~~s~~~~~dg~iyv~--GG~-~--------~-- 308 (656)
T 1k3i_A 244 FCPGISMDGNGQIVVTGGNDAKKTSLYDSSSDSWIPGPD-MQV-ARGYQSSATMSDGRVFTI--GGS-W--------S-- 308 (656)
T ss_dssp SSCEEEECTTSCEEEECSSSTTCEEEEEGGGTEEEECCC-CSS-CCSSCEEEECTTSCEEEE--CCC-C--------C--
T ss_pred ccccccCCCCCCEEEeCCCCCCceEEecCcCCceeECCC-CCc-cccccceEEecCCeEEEE--eCc-c--------c--
Confidence 43 333334789999985 69999999999999984 884 3432 234 5678887 341 0 0
Q ss_pred ccCCCCceeEEEcccccccccc-----cccC--CccEEEEeCCEEEEEEeeccccccccccceEEEEEEeCCCCcEEEec
Q 041767 194 SSLTNSQQFWHCLERREWGDVF-----DILK--RPRLVRGVGNRILMIGGLKSSFTLNASCSTILILRLDLDLLEWEEAG 266 (341)
Q Consensus 194 ~~~~~~~v~~yD~~~~~W~~~~-----~~~~--~~~lv~~~~g~l~vvgg~~~~~~~~~~~~~~~vw~~d~~~~~W~~~~ 266 (341)
.......+++||+++++|+.++ ++.. ...++. .++++|++||.++......... .++.||++++.|.+..
T Consensus 309 ~~~~~~~~e~yd~~t~~W~~~~~~~~~p~~~~~~~~~~~-~~~~iyv~Gg~~g~~~~~~~~~--~v~~yd~~~~~w~~~~ 385 (656)
T 1k3i_A 309 GGVFEKNGEVYSPSSKTWTSLPNAKVNPMLTADKQGLYR-SDNHAWLFGWKKGSVFQAGPST--AMNWYYTSGSGDVKSA 385 (656)
T ss_dssp SSSCCCCEEEEETTTTEEEEETTSCSGGGCCCCTTGGGT-TTCSCCEEECGGGCEEECCSSS--EEEEEECSTTCEEEEE
T ss_pred CCcccccceEeCCCCCcceeCCCccccccccccccceee-cCCceEEEECCCCcEEEecCcc--ceeeeecCCcceeecC
Confidence 0111246899999999999873 1111 122333 4789999998754311111122 4567788888887643
Q ss_pred c-CCHHHHHhhcCCCceEEE--ecCCEEEEEEccc--------C---cEEEEEeeeCCCCeeEEcC--CCCC
Q 041767 267 R-MPVEMYRCFSESSKFKVF--GMGDKVCFSAKRV--------G---RLALWECEKGGGGEWRWID--GLPG 322 (341)
Q Consensus 267 ~-mp~~~~~~~~~~~~~~~~--~~~~~i~~~~~~~--------~---~v~~yD~~~~~~~~W~~~~--~~~~ 322 (341)
. .+..............++ ..+++||+.++.. . .+.+||+. +++|..+. .+|.
T Consensus 386 ~~~~~~~~~~~~~~~~~av~~~~~~~~i~v~GG~~~~~~~~~~~~~~~v~~yd~~---~~~W~~~~~~~mp~ 454 (656)
T 1k3i_A 386 GKRQSNRGVAPDAMCGNAVMYDAVKGKILTFGGSPDYQDSDATTNAHIITLGEPG---TSPNTVFASNGLYF 454 (656)
T ss_dssp EECEETTEECCCCBTCEEEEEETTTTEEEEECCBSSSSSSBCCCCEEEEECCSTT---SCCEEEECTTCCSS
T ss_pred CccccccccCCCCCCCceEeccCCCCeEEEEeCCCCCCCCCcCCcceEEEcCCCC---CCCeeEEccCCCCC
Confidence 2 221000000000011111 3467888876531 2 67899999 99999986 6664
No 19
>3dsm_A Uncharacterized protein bacuni_02894; seven_blated beta propeller, structural genomics, PSI-2, Pro structure initiative; 1.90A {Bacteroides uniformis}
Probab=96.93 E-value=0.078 Score=46.53 Aligned_cols=250 Identities=11% Similarity=-0.020 Sum_probs=122.6
Q ss_pred CceEEEeeCCCCcEEEee-C--CCCCCCC-cceeeccCCEEEEecCCCCCCCCCceEEEEcCcccce-ecCCCCCCCCce
Q 041767 48 AAALHVYDPNQNQWLRFD-L--SFLPFRS-LHPVASSPGLIYLWGDLPDSPESNKSLIACNPLTRLY-RVLPQLGSAWSK 122 (341)
Q Consensus 48 ~~~~~~yd~~~~~W~~l~-~--~~~p~~~-~~~~~~~~glv~~~g~~~~~~~~~~~~~v~nP~t~~w-~~lp~~~~~~~~ 122 (341)
...+..+|+.+.+...-- . ...+... -.-++..++.+|+.... .+.+.++|+.|.+- ..++... .
T Consensus 16 ~~~l~~~d~~t~~~~~~i~~~~n~~~lg~~~~~i~~~~~~lyv~~~~------~~~v~viD~~t~~~~~~i~~~~----~ 85 (328)
T 3dsm_A 16 NATLSYYDPATCEVENEVFYRANGFKLGDVAQSMVIRDGIGWIVVNN------SHVIFAIDINTFKEVGRITGFT----S 85 (328)
T ss_dssp CBEEEEEETTTTEEECSHHHHHHSSCCBSCEEEEEEETTEEEEEEGG------GTEEEEEETTTCCEEEEEECCS----S
T ss_pred CceEEEEECCCCEEhhhhHhhhcCcccCccceEEEEECCEEEEEEcC------CCEEEEEECcccEEEEEcCCCC----C
Confidence 466889999998765311 0 0001101 11255578889888643 56899999999886 4454322 1
Q ss_pred eEEEEEcCCCcEEEEc---CeEEEEEcCCCcccc-ccccCCCCCCCcccccCceEEEeecCCCcCCcceeeEeecccCCC
Q 041767 123 HGSVLVDSLNKVMVLT---ELAALFFSNSNHWLK-FSSNLPSKPRSPILMLNSVYALCDVGSPWRSQWKLFCCNLSSLTN 198 (341)
Q Consensus 123 ~~~~~~~~~~ki~~~g---~~~evYd~~t~~W~~-~~~~~p~~~r~~~~~~~~~y~~~~~G~~~~~~~~~~~~~~~~~~~ 198 (341)
...++.+.++++|+.. +.+.++|+++++-.. +. ...... .......+. + ++|. +|... ....
T Consensus 86 p~~i~~~~~g~lyv~~~~~~~v~~iD~~t~~~~~~i~--~g~~~~-~~~~p~~i~-~-~~~~--------lyv~~-~~~~ 151 (328)
T 3dsm_A 86 PRYIHFLSDEKAYVTQIWDYRIFIINPKTYEITGYIE--CPDMDM-ESGSTEQMV-Q-YGKY--------VYVNC-WSYQ 151 (328)
T ss_dssp EEEEEEEETTEEEEEEBSCSEEEEEETTTTEEEEEEE--CTTCCT-TTCBCCCEE-E-ETTE--------EEEEE-CTTC
T ss_pred CcEEEEeCCCeEEEEECCCCeEEEEECCCCeEEEEEE--cCCccc-cCCCcceEE-E-ECCE--------EEEEc-CCCC
Confidence 2122232356898875 579999999876432 22 221000 000001121 1 3231 22221 1002
Q ss_pred CceeEEEcccccccc-cccccCCccEEEEeCCEEEEEEeeccccccccccceEEEEEEeCCCCcEEEeccCCHHHHHhhc
Q 041767 199 SQQFWHCLERREWGD-VFDILKRPRLVRGVGNRILMIGGLKSSFTLNASCSTILILRLDLDLLEWEEAGRMPVEMYRCFS 277 (341)
Q Consensus 199 ~~v~~yD~~~~~W~~-~~~~~~~~~lv~~~~g~l~vvgg~~~~~~~~~~~~~~~vw~~d~~~~~W~~~~~mp~~~~~~~~ 277 (341)
+.|..+|+++++... ++.......+....+|++|++....... .....+.-.|+++|+.+.+-++.-.+|.. .
T Consensus 152 ~~v~viD~~t~~~~~~i~~g~~p~~i~~~~dG~l~v~~~~~~~~-~~~~~~~~~v~~id~~t~~v~~~~~~~~g--~--- 225 (328)
T 3dsm_A 152 NRILKIDTETDKVVDELTIGIQPTSLVMDKYNKMWTITDGGYEG-SPYGYEAPSLYRIDAETFTVEKQFKFKLG--D--- 225 (328)
T ss_dssp CEEEEEETTTTEEEEEEECSSCBCCCEECTTSEEEEEBCCBCTT-CSSCBCCCEEEEEETTTTEEEEEEECCTT--C---
T ss_pred CEEEEEECCCCeEEEEEEcCCCccceEEcCCCCEEEEECCCccC-CccccCCceEEEEECCCCeEEEEEecCCC--C---
Confidence 368899999876432 2211111223322368988876322100 00000012467888877766543334321 0
Q ss_pred CCC-ceEEEecCCEEEEEEcccCcEEEEEeeeCCCCeeEEcCCCCCCCCCCeeeEEeec
Q 041767 278 ESS-KFKVFGMGDKVCFSAKRVGRLALWECEKGGGGEWRWIDGLPGIGDGPCRGFVYEA 335 (341)
Q Consensus 278 ~~~-~~~~~~~~~~i~~~~~~~~~v~~yD~~~~~~~~W~~~~~~~~~~~~~~~~~~~~p 335 (341)
.. .+.+...++.+|+... .+.++|+. +.+....+-.+. ..+...|+++.|
T Consensus 226 -~p~~la~~~d~~~lyv~~~---~v~~~d~~---t~~~~~~~~~~~-~~~~p~gi~vdp 276 (328)
T 3dsm_A 226 -WPSEVQLNGTRDTLYWINN---DIWRMPVE---ADRVPVRPFLEF-RDTKYYGLTVNP 276 (328)
T ss_dssp -CCEEEEECTTSCEEEEESS---SEEEEETT---CSSCCSSCSBCC-CSSCEEEEEECT
T ss_pred -CceeEEEecCCCEEEEEcc---EEEEEECC---CCceeeeeeecC-CCCceEEEEEcC
Confidence 11 1222234677887543 68999998 544321111111 122466777766
No 20
>3hfq_A Uncharacterized protein LP_2219; Q88V64_lacpl, NESG, LPR118, structural genomics, PSI-2, protein structure initiative; 1.96A {Lactobacillus plantarum}
Probab=96.50 E-value=0.17 Score=44.20 Aligned_cols=231 Identities=12% Similarity=0.083 Sum_probs=106.1
Q ss_pred ceEEEeeCCCCcEEEeeCCCCCCCCcceeeccCCEEEEecCCCCCCCCCceEEEEcCcccceecCCCCCCCCceeEEEEE
Q 041767 49 AALHVYDPNQNQWLRFDLSFLPFRSLHPVASSPGLIYLWGDLPDSPESNKSLIACNPLTRLYRVLPQLGSAWSKHGSVLV 128 (341)
Q Consensus 49 ~~~~~yd~~~~~W~~l~~~~~p~~~~~~~~~~~glv~~~g~~~~~~~~~~~~~v~nP~t~~w~~lp~~~~~~~~~~~~~~ 128 (341)
..++.+|+.+.+...+...........+.-+-+|.||+.+.. .....+.+|+..+++.+.+......-.....+..
T Consensus 18 i~v~~~d~~tg~~~~~~~~~~~~~p~~~a~spdg~l~~~~~~----~~~~~v~~~~~~~g~~~~~~~~~~~~~~p~~~a~ 93 (347)
T 3hfq_A 18 IYQGTLDTTAKTLTNDGLLAATQNPTYLALSAKDCLYSVDKE----DDEGGIAAWQIDGQTAHKLNTVVAPGTPPAYVAV 93 (347)
T ss_dssp EEEEEEETTTTEEEEEEEEEECSCCCCEEECTTCEEEEEEEE----TTEEEEEEEEEETTEEEEEEEEEEESCCCSEEEE
T ss_pred EEEEEEcCCCCeEEEeeeeeccCCcceEEEccCCeEEEEEec----CCCceEEEEEecCCcEEEeeeeecCCCCCEEEEE
Confidence 346667888887766432100111122334457777766531 1146899999988877665432111111123334
Q ss_pred cCCCc-EEEEc---CeEEEEEcC-CCccccccccCCCCCCCcc--cccCce--EEEeecCCCcCCcceeeEeecccCCCC
Q 041767 129 DSLNK-VMVLT---ELAALFFSN-SNHWLKFSSNLPSKPRSPI--LMLNSV--YALCDVGSPWRSQWKLFCCNLSSLTNS 199 (341)
Q Consensus 129 ~~~~k-i~~~g---~~~evYd~~-t~~W~~~~~~~p~~~r~~~--~~~~~~--y~~~~~G~~~~~~~~~~~~~~~~~~~~ 199 (341)
+++++ +|+.. +.+.+||.. ++.-+.+.. ++.....+. .....+ .++...| + ++..... .+
T Consensus 94 spdg~~l~~~~~~~~~v~v~~~~~~g~~~~~~~-~~~~~~~p~~~~~~~~~~~~~~spdg-------~-l~v~~~~--~~ 162 (347)
T 3hfq_A 94 DEARQLVYSANYHKGTAEVMKIAADGALTLTDT-VQHSGHGPRPEQDGSHIHYTDLTPDN-------R-LAVIDLG--SD 162 (347)
T ss_dssp ETTTTEEEEEETTTTEEEEEEECTTSCEEEEEE-EECCCCCSSTTCSSCCEEEEEECTTS-------C-EEEEETT--TT
T ss_pred CCCCCEEEEEeCCCCEEEEEEeCCCCCeeecce-eecCCCCCCccccCCCceEEEECCCC-------c-EEEEeCC--CC
Confidence 45564 66654 468889874 333333321 110000000 000001 1111112 1 1111110 13
Q ss_pred ceeEEEcc-cccccccccc-c---CCccEEEE-eCCE-EEEEEeeccccccccccceEEEEEEeCCCCcEEEecc---CC
Q 041767 200 QQFWHCLE-RREWGDVFDI-L---KRPRLVRG-VGNR-ILMIGGLKSSFTLNASCSTILILRLDLDLLEWEEAGR---MP 269 (341)
Q Consensus 200 ~v~~yD~~-~~~W~~~~~~-~---~~~~lv~~-~~g~-l~vvgg~~~~~~~~~~~~~~~vw~~d~~~~~W~~~~~---mp 269 (341)
.+..||+. +++...+... . ..+.-+.+ -+|+ ||+.+... ..+.+|.++..+.+++.+.. +|
T Consensus 163 ~v~~~~~~~~g~~~~~~~~~~~~g~~p~~~~~spdg~~l~v~~~~~---------~~v~v~~~~~~~g~~~~~~~~~~~~ 233 (347)
T 3hfq_A 163 KVYVYNVSDAGQLSEQSVLTMEAGFGPRHLVFSPDGQYAFLAGELS---------SQIASLKYDTQTGAFTQLGIVKTIP 233 (347)
T ss_dssp EEEEEEECTTSCEEEEEEEECCTTCCEEEEEECTTSSEEEEEETTT---------TEEEEEEEETTTTEEEEEEEEESSC
T ss_pred EEEEEEECCCCcEEEeeeEEcCCCCCCceEEECCCCCEEEEEeCCC---------CEEEEEEecCCCCceEEeeeeeecC
Confidence 57788887 4444332210 0 11222222 2455 66654321 24788998876666665443 33
Q ss_pred HHHHHhhcCCC---ceEEEecCCEEEEEEcccCcEEEEEee
Q 041767 270 VEMYRCFSESS---KFKVFGMGDKVCFSAKRVGRLALWECE 307 (341)
Q Consensus 270 ~~~~~~~~~~~---~~~~~~~~~~i~~~~~~~~~v~~yD~~ 307 (341)
.. +.... .+.+.-.+..+|+.....+.+.+||+.
T Consensus 234 ~~----~~~~~~~~~i~~spdG~~l~v~~~~~~~v~v~~~~ 270 (347)
T 3hfq_A 234 AD----YTAHNGAAAIRLSHDGHFLYVSNRGYNTLAVFAVT 270 (347)
T ss_dssp TT----CCSCCEEEEEEECTTSCEEEEEEETTTEEEEEEEC
T ss_pred CC----CCCCCcceeEEECCCCCEEEEEeCCCCEEEEEEEC
Confidence 21 00001 122222355677776555779999987
No 21
>3dsm_A Uncharacterized protein bacuni_02894; seven_blated beta propeller, structural genomics, PSI-2, Pro structure initiative; 1.90A {Bacteroides uniformis}
Probab=95.93 E-value=0.76 Score=40.04 Aligned_cols=176 Identities=11% Similarity=0.016 Sum_probs=86.9
Q ss_pred CceEEEEcCcccceecCCCC---CCCCce-eEEEEEcCCCcEEEEc---CeEEEEEcCCCccc-cccccCCCCCCCcccc
Q 041767 97 NKSLIACNPLTRLYRVLPQL---GSAWSK-HGSVLVDSLNKVMVLT---ELAALFFSNSNHWL-KFSSNLPSKPRSPILM 168 (341)
Q Consensus 97 ~~~~~v~nP~t~~w~~lp~~---~~~~~~-~~~~~~~~~~ki~~~g---~~~evYd~~t~~W~-~~~~~~p~~~r~~~~~ 168 (341)
...+.++||.|++...--.. ...... ...+.. .++++|++. +.+.++|.++.+-. .+.. .. .++.
T Consensus 16 ~~~l~~~d~~t~~~~~~i~~~~n~~~lg~~~~~i~~-~~~~lyv~~~~~~~v~viD~~t~~~~~~i~~-~~-~p~~---- 88 (328)
T 3dsm_A 16 NATLSYYDPATCEVENEVFYRANGFKLGDVAQSMVI-RDGIGWIVVNNSHVIFAIDINTFKEVGRITG-FT-SPRY---- 88 (328)
T ss_dssp CBEEEEEETTTTEEECSHHHHHHSSCCBSCEEEEEE-ETTEEEEEEGGGTEEEEEETTTCCEEEEEEC-CS-SEEE----
T ss_pred CceEEEEECCCCEEhhhhHhhhcCcccCccceEEEE-ECCEEEEEEcCCCEEEEEECcccEEEEEcCC-CC-CCcE----
Confidence 57899999999987642100 001111 112222 257888875 57999999987652 2221 11 1111
Q ss_pred cCceEEEeecCCCcCCcceeeEeecccCCCCceeEEEccccccc-cccccc-----CCc-cEEEEeCCEEEEEEeecccc
Q 041767 169 LNSVYALCDVGSPWRSQWKLFCCNLSSLTNSQQFWHCLERREWG-DVFDIL-----KRP-RLVRGVGNRILMIGGLKSSF 241 (341)
Q Consensus 169 ~~~~y~~~~~G~~~~~~~~~~~~~~~~~~~~~v~~yD~~~~~W~-~~~~~~-----~~~-~lv~~~~g~l~vvgg~~~~~ 241 (341)
+ ++..+|. +|..... .+.|..+|+++.+-. .++... ..+ .++. .+++||+......
T Consensus 89 ---i-~~~~~g~--------lyv~~~~--~~~v~~iD~~t~~~~~~i~~g~~~~~~~~p~~i~~-~~~~lyv~~~~~~-- 151 (328)
T 3dsm_A 89 ---I-HFLSDEK--------AYVTQIW--DYRIFIINPKTYEITGYIECPDMDMESGSTEQMVQ-YGKYVYVNCWSYQ-- 151 (328)
T ss_dssp ---E-EEEETTE--------EEEEEBS--CSEEEEEETTTTEEEEEEECTTCCTTTCBCCCEEE-ETTEEEEEECTTC--
T ss_pred ---E-EEeCCCe--------EEEEECC--CCeEEEEECCCCeEEEEEEcCCccccCCCcceEEE-ECCEEEEEcCCCC--
Confidence 1 1111121 2221111 135888999876543 222111 022 3443 5899998753111
Q ss_pred ccccccceEEEEEEeCCCCcEEEeccCCHHHHHhhcCCCceEEEecCCEEEEEEccc----------CcEEEEEeeeCCC
Q 041767 242 TLNASCSTILILRLDLDLLEWEEAGRMPVEMYRCFSESSKFKVFGMGDKVCFSAKRV----------GRLALWECEKGGG 311 (341)
Q Consensus 242 ~~~~~~~~~~vw~~d~~~~~W~~~~~mp~~~~~~~~~~~~~~~~~~~~~i~~~~~~~----------~~v~~yD~~~~~~ 311 (341)
. .|..+|..+.+..+....... -..+ .+...+++|+..... ..+.++|+. +
T Consensus 152 ------~--~v~viD~~t~~~~~~i~~g~~-------p~~i-~~~~dG~l~v~~~~~~~~~~~~~~~~~v~~id~~---t 212 (328)
T 3dsm_A 152 ------N--RILKIDTETDKVVDELTIGIQ-------PTSL-VMDKYNKMWTITDGGYEGSPYGYEAPSLYRIDAE---T 212 (328)
T ss_dssp ------C--EEEEEETTTTEEEEEEECSSC-------BCCC-EECTTSEEEEEBCCBCTTCSSCBCCCEEEEEETT---T
T ss_pred ------C--EEEEEECCCCeEEEEEEcCCC-------ccce-EEcCCCCEEEEECCCccCCccccCCceEEEEECC---C
Confidence 1 356677776655442222110 0012 223345677665432 568999998 5
Q ss_pred CeeE
Q 041767 312 GEWR 315 (341)
Q Consensus 312 ~~W~ 315 (341)
.+..
T Consensus 213 ~~v~ 216 (328)
T 3dsm_A 213 FTVE 216 (328)
T ss_dssp TEEE
T ss_pred CeEE
Confidence 5443
No 22
>1fs1_A SKP2 F-BOX, cyclin A/CDK2-associated P19; F-BOX, LRR, leucine-rich repeat, SCF, ubiquitin, ubiquitin protein ligase; 1.80A {Homo sapiens} SCOP: a.158.1.1 PDB: 1ldk_E
Probab=95.16 E-value=0.0028 Score=39.56 Aligned_cols=18 Identities=22% Similarity=0.477 Sum_probs=16.4
Q ss_pred cccccccccccccCChhh
Q 041767 2 ICRSVCKLFNQILTSSSF 19 (341)
Q Consensus 2 r~r~VcK~W~~li~s~~F 19 (341)
++++|||+|++++.++.|
T Consensus 31 ~~~~Vck~w~~~~~~~~l 48 (53)
T 1fs1_A 31 KVSGVCKRWYRLASDESL 48 (53)
T ss_dssp HHHTTCHHHHHHHTCGGG
T ss_pred HHHHHHHHHHHHhCChHH
Confidence 688999999999999876
No 23
>2e31_A FBS1, F-box only protein 2; ubiquitin, SCF, ubiquitin ligase, FBS1; 2.40A {Mus musculus} PDB: 2e32_A
Probab=95.02 E-value=0.0041 Score=53.80 Aligned_cols=25 Identities=24% Similarity=0.527 Sum_probs=22.8
Q ss_pred cccccccccccccCChhhHHHHhcC
Q 041767 2 ICRSVCKLFNQILTSSSFIHLISTQ 26 (341)
Q Consensus 2 r~r~VcK~W~~li~s~~F~~~~~~~ 26 (341)
|||+|||+|++|+++|.|...+.++
T Consensus 74 r~~~VCk~Wr~l~~~~~~w~~~~~~ 98 (297)
T 2e31_A 74 ACRLVCLRWKELVDGAPLWLLKCQQ 98 (297)
T ss_dssp TGGGTCHHHHHHHTSHHHHHHHHHH
T ss_pred HHHHHhHHHHHHhcChHHHHHHhhc
Confidence 8999999999999999998888754
No 24
>3g4e_A Regucalcin; six bladed beta-propeller, gluconolcatonase, organophosphate hydrolase, calcium bound, alternative splicing, cytoplasm, phosphoprotein; 1.42A {Homo sapiens} PDB: 3g4h_B
Probab=94.34 E-value=2.2 Score=36.35 Aligned_cols=66 Identities=6% Similarity=-0.041 Sum_probs=43.3
Q ss_pred cCCEEEEecCCCCCCCCCceEEEEcCcccceecCCCCCCCCceeEEEEEcCCCcEEEEc-CeEEEEEcCCCcccccc
Q 041767 80 SPGLIYLWGDLPDSPESNKSLIACNPLTRLYRVLPQLGSAWSKHGSVLVDSLNKVMVLT-ELAALFFSNSNHWLKFS 155 (341)
Q Consensus 80 ~~glv~~~g~~~~~~~~~~~~~v~nP~t~~w~~lp~~~~~~~~~~~~~~~~~~ki~~~g-~~~evYd~~t~~W~~~~ 155 (341)
.+|.||+.+.. ...+++|||.+++...+.... ....+..+.++++++.. ..+.+||.++++.+.+.
T Consensus 23 ~~~~l~~~d~~------~~~i~~~d~~~~~~~~~~~~~----~~~~i~~~~dG~l~v~~~~~l~~~d~~~g~~~~~~ 89 (297)
T 3g4e_A 23 VSNSLLFVDIP------AKKVCRWDSFTKQVQRVTMDA----PVSSVALRQSGGYVATIGTKFCALNWKEQSAVVLA 89 (297)
T ss_dssp TTTEEEEEETT------TTEEEEEETTTCCEEEEECSS----CEEEEEEBTTSSEEEEETTEEEEEETTTTEEEEEE
T ss_pred CCCEEEEEECC------CCEEEEEECCCCcEEEEeCCC----ceEEEEECCCCCEEEEECCeEEEEECCCCcEEEEE
Confidence 35677776543 568999999988765443211 12244455667766543 57899999998887765
No 25
>3nol_A Glutamine cyclotransferase; beta-propeller, glutaminyl cyclase, pyrogl transferase; 1.70A {Zymomonas mobilis} PDB: 3nom_A
Probab=93.85 E-value=2.6 Score=35.54 Aligned_cols=186 Identities=12% Similarity=-0.039 Sum_probs=95.0
Q ss_pred eeccCCEEEEecCCCCCCCCCceEEEEcCcccceecCCCCCCCCceeE-EEEEcCCCcEEEEc---CeEEEEEcCCCccc
Q 041767 77 VASSPGLIYLWGDLPDSPESNKSLIACNPLTRLYRVLPQLGSAWSKHG-SVLVDSLNKVMVLT---ELAALFFSNSNHWL 152 (341)
Q Consensus 77 ~~~~~glv~~~g~~~~~~~~~~~~~v~nP~t~~w~~lp~~~~~~~~~~-~~~~~~~~ki~~~g---~~~evYd~~t~~W~ 152 (341)
+...+|.||...|. .+.+.+.++|+.|++-..--+++ + ..++ .+.. .+++||++. +.+.+||.++.+=.
T Consensus 48 L~~~~~~LyestG~----~g~S~v~~vD~~Tgkv~~~~~l~-~-~~FgeGit~-~g~~ly~ltw~~~~v~v~D~~t~~~~ 120 (262)
T 3nol_A 48 FFYRNGYFYESTGL----NGRSSIRKVDIESGKTLQQIELG-K-RYFGEGISD-WKDKIVGLTWKNGLGFVWNIRNLRQV 120 (262)
T ss_dssp EEEETTEEEEEEEE----TTEEEEEEECTTTCCEEEEEECC-T-TCCEEEEEE-ETTEEEEEESSSSEEEEEETTTCCEE
T ss_pred EEEECCEEEEECCC----CCCceEEEEECCCCcEEEEEecC-C-ccceeEEEE-eCCEEEEEEeeCCEEEEEECccCcEE
Confidence 44458899988764 12468999999999865432332 1 2333 2222 267999985 57999999876643
Q ss_pred cccccCCCCCCCcccccCceEEEeecCCCcCCcceeeEeecccCCCCceeEEEcccccc-ccccc-----ccCCccEEEE
Q 041767 153 KFSSNLPSKPRSPILMLNSVYALCDVGSPWRSQWKLFCCNLSSLTNSQQFWHCLERREW-GDVFD-----ILKRPRLVRG 226 (341)
Q Consensus 153 ~~~~~~p~~~r~~~~~~~~~y~~~~~G~~~~~~~~~~~~~~~~~~~~~v~~yD~~~~~W-~~~~~-----~~~~~~lv~~ 226 (341)
.. ++... .+ .. ++..|. .++.. . . .+.+..+|+++.+= ..++- ......-+++
T Consensus 121 --~t-i~~~~------eG-~g-lt~dg~-------~L~~S-d-G-s~~i~~iDp~T~~v~~~I~V~~~g~~~~~lNELe~ 179 (262)
T 3nol_A 121 --RS-FNYDG------EG-WG-LTHNDQ-------YLIMS-D-G-TPVLRFLDPESLTPVRTITVTAHGEELPELNELEW 179 (262)
T ss_dssp --EE-EECSS------CC-CC-EEECSS-------CEEEC-C-S-SSEEEEECTTTCSEEEEEECEETTEECCCEEEEEE
T ss_pred --EE-EECCC------Cc-eE-EecCCC-------EEEEE-C-C-CCeEEEEcCCCCeEEEEEEeccCCccccccceeEE
Confidence 21 33110 00 11 111121 12221 1 1 24688899987431 12221 1111112444
Q ss_pred eCCEEEEEEeeccccccccccceEEEEEEeCCCCcEEEeccCCHHHHHhh---cCCC---ceEEEecCCEEEEEEcccCc
Q 041767 227 VGNRILMIGGLKSSFTLNASCSTILILRLDLDLLEWEEAGRMPVEMYRCF---SESS---KFKVFGMGDKVCFSAKRVGR 300 (341)
Q Consensus 227 ~~g~l~vvgg~~~~~~~~~~~~~~~vw~~d~~~~~W~~~~~mp~~~~~~~---~~~~---~~~~~~~~~~i~~~~~~~~~ 300 (341)
.+|+||+-....+ .|.++|+.+.+=+..-+++....... .... .+..-..++.+|+.++....
T Consensus 180 ~~G~lyan~w~~~-----------~I~vIDp~tG~V~~~Id~~~L~~~~~~~~~~~~vlNGIA~dp~~~~lfVTGK~Wp~ 248 (262)
T 3nol_A 180 VDGEIFANVWQTN-----------KIVRIDPETGKVTGIIDLNGILAEAGPLPSPIDVLNGIAWDKEHHRLFVTGKLWPK 248 (262)
T ss_dssp ETTEEEEEETTSS-----------EEEEECTTTCBEEEEEECTTGGGGSCSCCSSCCCEEEEEEETTTTEEEEEETTCSE
T ss_pred ECCEEEEEEccCC-----------eEEEEECCCCcEEEEEECCcCccccccccCcCCceEEEEEcCCCCEEEEECCCCCc
Confidence 5889996432211 46788997766444434431110100 0011 23333346888988887554
Q ss_pred E
Q 041767 301 L 301 (341)
Q Consensus 301 v 301 (341)
+
T Consensus 249 ~ 249 (262)
T 3nol_A 249 V 249 (262)
T ss_dssp E
T ss_pred e
Confidence 3
No 26
>3q7m_A Lipoprotein YFGL, BAMB; beta-propeller, BAM complex, outer membrane protein folding, negative, BAMA, protein binding; 1.65A {Escherichia coli} PDB: 3q7n_A 3q7o_A 3p1l_A 3prw_A 2yh3_A 3q54_A
Probab=93.40 E-value=3.8 Score=35.98 Aligned_cols=96 Identities=16% Similarity=0.127 Sum_probs=48.2
Q ss_pred ceEEEeeCCCCc--EEEeeC-CCCCCCCcceeeccCCEEEEecCCCCCCCCCceEEEEcCcccc--eecCCCCCCC----
Q 041767 49 AALHVYDPNQNQ--WLRFDL-SFLPFRSLHPVASSPGLIYLWGDLPDSPESNKSLIACNPLTRL--YRVLPQLGSA---- 119 (341)
Q Consensus 49 ~~~~~yd~~~~~--W~~l~~-~~~p~~~~~~~~~~~glv~~~g~~~~~~~~~~~~~v~nP~t~~--w~~lp~~~~~---- 119 (341)
..+.++|+.+.+ |+.-.. +..........+..+|.|++... ...++.+|+.|++ |+.-.+.+..
T Consensus 153 g~l~~~d~~tG~~~W~~~~~~~~~~~~~~~~~~~~~~~v~~g~~-------~g~l~~~d~~tG~~~w~~~~~~~~~~~~~ 225 (376)
T 3q7m_A 153 GQLQALNEADGAVKWTVNLDMPSLSLRGESAPTTAFGAAVVGGD-------NGRVSAVLMEQGQMIWQQRISQATGSTEI 225 (376)
T ss_dssp SEEEEEETTTCCEEEEEECCC-----CCCCCCEEETTEEEECCT-------TTEEEEEETTTCCEEEEEECCC-------
T ss_pred CeEEEEECCCCcEEEEEeCCCCceeecCCCCcEEECCEEEEEcC-------CCEEEEEECCCCcEEEEEecccCCCCccc
Confidence 347778877664 654321 11111111123334677776432 3578999998776 5432111100
Q ss_pred -C---ceeEEEEEcCCCcEEEEc--CeEEEEEcCCC--cccc
Q 041767 120 -W---SKHGSVLVDSLNKVMVLT--ELAALFFSNSN--HWLK 153 (341)
Q Consensus 120 -~---~~~~~~~~~~~~ki~~~g--~~~evYd~~t~--~W~~ 153 (341)
+ .....++. ++.||+.+ +.+..+|.+++ .|+.
T Consensus 226 ~~~~~~~~~p~~~--~~~v~~~~~~g~l~~~d~~tG~~~w~~ 265 (376)
T 3q7m_A 226 DRLSDVDTTPVVV--NGVVFALAYNGNLTALDLRSGQIMWKR 265 (376)
T ss_dssp ----CCCCCCEEE--TTEEEEECTTSCEEEEETTTCCEEEEE
T ss_pred ccccccCCCcEEE--CCEEEEEecCcEEEEEECCCCcEEeec
Confidence 0 00111122 56777765 57889998776 4765
No 27
>3q7m_A Lipoprotein YFGL, BAMB; beta-propeller, BAM complex, outer membrane protein folding, negative, BAMA, protein binding; 1.65A {Escherichia coli} PDB: 3q7n_A 3q7o_A 3p1l_A 3prw_A 2yh3_A 3q54_A
Probab=93.36 E-value=3.9 Score=35.93 Aligned_cols=69 Identities=16% Similarity=0.085 Sum_probs=41.0
Q ss_pred eeccCCEEEEecCCCCCCCCCceEEEEcCcccc--eecCCCCCC------CCceeEEEEEcCCCcEEEEc--CeEEEEEc
Q 041767 77 VASSPGLIYLWGDLPDSPESNKSLIACNPLTRL--YRVLPQLGS------AWSKHGSVLVDSLNKVMVLT--ELAALFFS 146 (341)
Q Consensus 77 ~~~~~glv~~~g~~~~~~~~~~~~~v~nP~t~~--w~~lp~~~~------~~~~~~~~~~~~~~ki~~~g--~~~evYd~ 146 (341)
.+..+|.||+... ...++.+|+.|++ |+.-.+... .......... .+++||+.. +.+..+|.
T Consensus 49 p~v~~~~v~~~~~-------~g~v~a~d~~tG~~~W~~~~~~~~~~~~~~~~~~~~~~~~-~~~~v~v~~~~g~l~a~d~ 120 (376)
T 3q7m_A 49 PALADNVVYAADR-------AGLVKALNADDGKEIWSVSLAEKDGWFSKEPALLSGGVTV-SGGHVYIGSEKAQVYALNT 120 (376)
T ss_dssp CEEETTEEEEECT-------TSEEEEEETTTCCEEEEEECCC---CCSCCCCCEEEEEEE-ETTEEEEEETTSEEEEEET
T ss_pred cEEECCEEEEEcC-------CCeEEEEEccCCceeeeecCccccccccccCcccccCceE-eCCEEEEEcCCCEEEEEEC
Confidence 4456888888753 3589999998776 554221110 0111122222 257888864 47899998
Q ss_pred CCCc--ccc
Q 041767 147 NSNH--WLK 153 (341)
Q Consensus 147 ~t~~--W~~ 153 (341)
++++ |+.
T Consensus 121 ~tG~~~W~~ 129 (376)
T 3q7m_A 121 SDGTVAWQT 129 (376)
T ss_dssp TTCCEEEEE
T ss_pred CCCCEEEEE
Confidence 8764 865
No 28
>3jro_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum, transport, membrane, mRNA transport; 4.00A {Saccharomyces cerevisiae}
Probab=93.10 E-value=7 Score=38.28 Aligned_cols=59 Identities=7% Similarity=0.071 Sum_probs=33.1
Q ss_pred CceEEEEcCcccceecCCCCCCCCceeEEEEEcCC--CcEEEEc---CeEEEEEcCCCcccccc
Q 041767 97 NKSLIACNPLTRLYRVLPQLGSAWSKHGSVLVDSL--NKVMVLT---ELAALFFSNSNHWLKFS 155 (341)
Q Consensus 97 ~~~~~v~nP~t~~w~~lp~~~~~~~~~~~~~~~~~--~ki~~~g---~~~evYd~~t~~W~~~~ 155 (341)
.+.+.+||..++++..+..+......-..+....+ ++.++.+ +.+.+||..++.|..+.
T Consensus 30 dg~I~vwd~~~~~~~~~~~l~~h~~~V~~l~~s~~~~~~~l~s~s~Dg~I~vwd~~~~~~~~~~ 93 (753)
T 3jro_A 30 DKTIKIFEVEGETHKLIDTLTGHEGPVWRVDWAHPKFGTILASCSYDGKVLIWKEENGRWSQIA 93 (753)
T ss_dssp TTEEEEEEEETTEEEEEEEECCCSSCEEEEEECCTTSCSEEEEEETTSCEEEEEEETTEEEEEE
T ss_pred CCcEEEEecCCCCCccceeccCCcCceEEEEecCCCCCCEEEEEeCCCeEEEEECCCCcccccc
Confidence 46788888776555544333211111112222222 5555544 57999999998887665
No 29
>2iwa_A Glutamine cyclotransferase; pyroglutamate, acyltransferase, glutaminyl CYCL N-terminal cyclisation; HET: NAG; 1.6A {Carica papaya} PDB: 2faw_A*
Probab=92.13 E-value=4.9 Score=34.00 Aligned_cols=191 Identities=8% Similarity=-0.030 Sum_probs=100.4
Q ss_pred eeccC-CEEEEecCCCCCCCCCceEEEEcCcccceecCCCCCCCCce-eEEEEEcCCCcEEEEc---CeEEEEEcCCCcc
Q 041767 77 VASSP-GLIYLWGDLPDSPESNKSLIACNPLTRLYRVLPQLGSAWSK-HGSVLVDSLNKVMVLT---ELAALFFSNSNHW 151 (341)
Q Consensus 77 ~~~~~-glv~~~g~~~~~~~~~~~~~v~nP~t~~w~~lp~~~~~~~~-~~~~~~~~~~ki~~~g---~~~evYd~~t~~W 151 (341)
++..+ |.||+..+. ...+.+.++|+.|++-..--+++. +.+ .+..+. ++++|+.. +.+.+||..+.+
T Consensus 26 l~~~~dg~Lyvstg~----~~~s~v~~iD~~tg~v~~~i~l~~-~~fgeGi~~~--g~~lyv~t~~~~~v~viD~~t~~- 97 (266)
T 2iwa_A 26 LVYAENDTLFESTGL----YGRSSVRQVALQTGKVENIHKMDD-SYFGEGLTLL--NEKLYQVVWLKNIGFIYDRRTLS- 97 (266)
T ss_dssp EEECSTTEEEEEECS----TTTCEEEEEETTTCCEEEEEECCT-TCCEEEEEEE--TTEEEEEETTCSEEEEEETTTTE-
T ss_pred EEEeCCCeEEEECCC----CCCCEEEEEECCCCCEEEEEecCC-CcceEEEEEe--CCEEEEEEecCCEEEEEECCCCc-
Confidence 44344 899988653 135789999999998654222221 112 123333 56999885 589999998653
Q ss_pred ccccccCCCC-CCCcccccCceEEEeecCCCcCCcceeeEeecccCCCCceeEEEcccccc-ccccc-----ccCCccEE
Q 041767 152 LKFSSNLPSK-PRSPILMLNSVYALCDVGSPWRSQWKLFCCNLSSLTNSQQFWHCLERREW-GDVFD-----ILKRPRLV 224 (341)
Q Consensus 152 ~~~~~~~p~~-~r~~~~~~~~~y~~~~~G~~~~~~~~~~~~~~~~~~~~~v~~yD~~~~~W-~~~~~-----~~~~~~lv 224 (341)
.+.. ++.. +. + .. ++..|. .+|.. . . .+.+..+|+++.+= ..++- ....+.-+
T Consensus 98 -v~~~-i~~g~~~------g-~g-lt~Dg~-------~l~vs-~-g-s~~l~viD~~t~~v~~~I~Vg~~~~p~~~~nel 157 (266)
T 2iwa_A 98 -NIKN-FTHQMKD------G-WG-LATDGK-------ILYGS-D-G-TSILYEIDPHTFKLIKKHNVKYNGHRVIRLNEL 157 (266)
T ss_dssp -EEEE-EECCSSS------C-CE-EEECSS-------SEEEE-C-S-SSEEEEECTTTCCEEEEEECEETTEECCCEEEE
T ss_pred -EEEE-EECCCCC------e-EE-EEECCC-------EEEEE-C-C-CCeEEEEECCCCcEEEEEEECCCCcccccceeE
Confidence 3332 3311 11 1 11 121131 12221 1 1 24688899987431 12221 11122233
Q ss_pred EEeCCEEEEEEeeccccccccccceEEEEEEeCCCCcEEEeccCCHH-HHHh--hc---CCC---ceEEEecCCEEEEEE
Q 041767 225 RGVGNRILMIGGLKSSFTLNASCSTILILRLDLDLLEWEEAGRMPVE-MYRC--FS---ESS---KFKVFGMGDKVCFSA 295 (341)
Q Consensus 225 ~~~~g~l~vvgg~~~~~~~~~~~~~~~vw~~d~~~~~W~~~~~mp~~-~~~~--~~---~~~---~~~~~~~~~~i~~~~ 295 (341)
++.+|+||+-....+ .|.++|+.+.+ .++.++.. +... .. ... .+.....++.+|+.+
T Consensus 158 e~~dg~lyvn~~~~~-----------~V~vID~~tg~--V~~~I~~~g~~~~~~~~~~~~~~v~nGIa~~~~~~~lfVTg 224 (266)
T 2iwa_A 158 EYINGEVWANIWQTD-----------CIARISAKDGT--LLGWILLPNLRKKLIDEGFRDIDVLNGIAWDQENKRIFVTG 224 (266)
T ss_dssp EEETTEEEEEETTSS-----------EEEEEETTTCC--EEEEEECHHHHHHHHHTTCTTCCCEEEEEEETTTTEEEEEE
T ss_pred EEECCEEEEecCCCC-----------eEEEEECCCCc--EEEEEECCCcccccccccccccCceEEEEEcCCCCEEEEEC
Confidence 344788886542211 47788986654 33333321 1111 00 011 233344578999999
Q ss_pred cccCcEEEEEeee
Q 041767 296 KRVGRLALWECEK 308 (341)
Q Consensus 296 ~~~~~v~~yD~~~ 308 (341)
+..+.+.+.|+..
T Consensus 225 k~~~~v~~i~l~~ 237 (266)
T 2iwa_A 225 KLWPKLFEIKLHL 237 (266)
T ss_dssp TTCSEEEEEEEEE
T ss_pred CCCCeEEEEEEec
Confidence 8888899999983
No 30
>3v9f_A Two-component system sensor histidine kinase/RESP regulator, hybrid (ONE-component...; beta-propeller, beta-sandwich; 3.30A {Bacteroides thetaiotaomicron}
Probab=92.00 E-value=7.1 Score=38.34 Aligned_cols=212 Identities=8% Similarity=0.035 Sum_probs=111.0
Q ss_pred ceEEEeeCCCCcEEEeeCCCCCCCC-cceeeccCCEEEEecCCCCCCCCCceEEEEcCcccceecCCCCCC-C--CceeE
Q 041767 49 AALHVYDPNQNQWLRFDLSFLPFRS-LHPVASSPGLIYLWGDLPDSPESNKSLIACNPLTRLYRVLPQLGS-A--WSKHG 124 (341)
Q Consensus 49 ~~~~~yd~~~~~W~~l~~~~~p~~~-~~~~~~~~glv~~~g~~~~~~~~~~~~~v~nP~t~~w~~lp~~~~-~--~~~~~ 124 (341)
..+..||+.++++..+..+.++... ..+..-.+|.|++.. ...++++||.++++..+..... . .....
T Consensus 427 ~Gl~~~~~~~~~~~~~~~~~~~~~~v~~i~~d~~g~lwigt--------~~Gl~~~~~~~~~~~~~~~~~~~~~~~~~i~ 498 (781)
T 3v9f_A 427 GNISYYNTRLKKFQIIELEKNELLDVRVFYEDKNKKIWIGT--------HAGVFVIDLASKKVIHHYDTSNSQLLENFVR 498 (781)
T ss_dssp EEEEEECSSSCEEEECCSTTTCCCCEEEEEECTTSEEEEEE--------TTEEEEEESSSSSCCEEECTTTSSCSCSCEE
T ss_pred CCEEEEcCCCCcEEEeccCCCCCCeEEEEEECCCCCEEEEE--------CCceEEEeCCCCeEEecccCcccccccceeE
Confidence 3466778887777766532122111 222233367777653 2468999999999876643220 0 11112
Q ss_pred EEEEcCCCcEEEEc--CeEEEEEcCCCccccccccCCCCCCCcccccCceEEEee--cCCCcCCcceeeEeecccCCCCc
Q 041767 125 SVLVDSLNKVMVLT--ELAALFFSNSNHWLKFSSNLPSKPRSPILMLNSVYALCD--VGSPWRSQWKLFCCNLSSLTNSQ 200 (341)
Q Consensus 125 ~~~~~~~~ki~~~g--~~~evYd~~t~~W~~~~~~~p~~~r~~~~~~~~~y~~~~--~G~~~~~~~~~~~~~~~~~~~~~ 200 (341)
.+..+..++|.+.. +.+.+||+.+++++.... +. .+..+.++.++. .|.+| .+ +. ..
T Consensus 499 ~i~~d~~g~lWigt~~~Gl~~~~~~~~~~~~~~~--~~-----~l~~~~i~~i~~d~~g~lW-------i~--T~---~G 559 (781)
T 3v9f_A 499 SIAQDSEGRFWIGTFGGGVGIYTPDMQLVRKFNQ--YE-----GFCSNTINQIYRSSKGQMW-------LA--TG---EG 559 (781)
T ss_dssp EEEECTTCCEEEEESSSCEEEECTTCCEEEEECT--TT-----TCSCSCEEEEEECTTSCEE-------EE--ET---TE
T ss_pred EEEEcCCCCEEEEEcCCCEEEEeCCCCeEEEccC--CC-----CCCCCeeEEEEECCCCCEE-------EE--EC---CC
Confidence 44456677888764 468899999998876542 10 011122322221 13222 11 11 13
Q ss_pred e-eEEEcccccccccc--cccC---CccEEEEeCCEEEEEEeeccccccccccceEEEEEEeCCCCcEEEeccCCHHHHH
Q 041767 201 Q-FWHCLERREWGDVF--DILK---RPRLVRGVGNRILMIGGLKSSFTLNASCSTILILRLDLDLLEWEEAGRMPVEMYR 274 (341)
Q Consensus 201 v-~~yD~~~~~W~~~~--~~~~---~~~lv~~~~g~l~vvgg~~~~~~~~~~~~~~~vw~~d~~~~~W~~~~~mp~~~~~ 274 (341)
+ ..||++++++.... ..+. ...++.-.+|+|++.+. . .+..+++++.+++....-. .
T Consensus 560 lv~~~d~~~~~~~~~~~~~gl~~~~i~~i~~d~~g~lW~~t~--~-----------Gl~~~~~~~~~~~~~~~~d-G--- 622 (781)
T 3v9f_A 560 LVCFPSARNFDYQVFQRKEGLPNTHIRAISEDKNGNIWASTN--T-----------GISCYITSKKCFYTYDHSN-N--- 622 (781)
T ss_dssp EEEESCTTTCCCEEECGGGTCSCCCCCEEEECSSSCEEEECS--S-----------CEEEEETTTTEEEEECGGG-T---
T ss_pred ceEEECCCCCcEEEccccCCCCCceEEEEEECCCCCEEEEcC--C-----------ceEEEECCCCceEEecccC-C---
Confidence 5 78898888776643 1221 12344323577876541 1 1457788877777764211 1
Q ss_pred hhcCCC---ceEEEecCCEEEEEEcccCcEEEEEee
Q 041767 275 CFSESS---KFKVFGMGDKVCFSAKRVGRLALWECE 307 (341)
Q Consensus 275 ~~~~~~---~~~~~~~~~~i~~~~~~~~~v~~yD~~ 307 (341)
+.... ...+...++.+++.+. ..+..||++
T Consensus 623 -l~~~~f~~~~~~~~~~G~l~~g~~--~Gl~~f~p~ 655 (781)
T 3v9f_A 623 -IPQGSFISGCVTKDHNGLIYFGSI--NGLCFFNPD 655 (781)
T ss_dssp -CCSSCEEEEEEEECTTSCEEEEET--TEEEEECSC
T ss_pred -ccccccccCceEECCCCEEEEECC--CceEEEChh
Confidence 11000 1122233567777553 567888887
No 31
>3nok_A Glutaminyl cyclase; beta-propeller, cyclotransferase, pyrogl transferase; HET: MES DDQ; 1.65A {Myxococcus xanthus}
Probab=91.12 E-value=6.3 Score=33.30 Aligned_cols=184 Identities=8% Similarity=-0.128 Sum_probs=94.3
Q ss_pred eeeccCCEEEEecCCCCCCCCCceEEEEcCcccceecCCCCCCCCceeE-EEEEcCCCcEEEEc---CeEEEEEcCCCcc
Q 041767 76 PVASSPGLIYLWGDLPDSPESNKSLIACNPLTRLYRVLPQLGSAWSKHG-SVLVDSLNKVMVLT---ELAALFFSNSNHW 151 (341)
Q Consensus 76 ~~~~~~glv~~~g~~~~~~~~~~~~~v~nP~t~~w~~lp~~~~~~~~~~-~~~~~~~~ki~~~g---~~~evYd~~t~~W 151 (341)
.+...++.||...|. ...+.++|+.|++-..-- ++ + ..++ .+.. .+++||++. +.+.+||.++.+=
T Consensus 59 GL~~~~~~Ly~stG~------~g~v~~iD~~Tgkv~~~~-l~-~-~~FgeGit~-~g~~Ly~ltw~~~~v~V~D~~Tl~~ 128 (268)
T 3nok_A 59 GLVFHQGHFFESTGH------QGTLRQLSLESAQPVWME-RL-G-NIFAEGLAS-DGERLYQLTWTEGLLFTWSGMPPQR 128 (268)
T ss_dssp EEEEETTEEEEEETT------TTEEEECCSSCSSCSEEE-EC-T-TCCEEEEEE-CSSCEEEEESSSCEEEEEETTTTEE
T ss_pred eEEEECCEEEEEcCC------CCEEEEEECCCCcEEeEE-CC-C-CcceeEEEE-eCCEEEEEEccCCEEEEEECCcCcE
Confidence 456668999988775 345999999998854322 32 1 2333 2223 367999986 5799999987654
Q ss_pred ccccccCCCCCCCcccccCceEEEeecCCCcCCcceeeEeecccCCCCceeEEEccccccc-ccc--c---ccCCccEEE
Q 041767 152 LKFSSNLPSKPRSPILMLNSVYALCDVGSPWRSQWKLFCCNLSSLTNSQQFWHCLERREWG-DVF--D---ILKRPRLVR 225 (341)
Q Consensus 152 ~~~~~~~p~~~r~~~~~~~~~y~~~~~G~~~~~~~~~~~~~~~~~~~~~v~~yD~~~~~W~-~~~--~---~~~~~~lv~ 225 (341)
.. . ++.... + ..+..+ |. .++... . .+.+..+|+++.+=. .+. . ......-++
T Consensus 129 ~~--t-i~~~~e------G-wGLt~D-g~-------~L~vSd--G-s~~l~~iDp~T~~v~~~I~V~~~g~~v~~lNeLe 187 (268)
T 3nok_A 129 ER--T-TRYSGE------G-WGLCYW-NG-------KLVRSD--G-GTMLTFHEPDGFALVGAVQVKLRGQPVELINELE 187 (268)
T ss_dssp EE--E-EECSSC------C-CCEEEE-TT-------EEEEEC--S-SSEEEEECTTTCCEEEEEECEETTEECCCEEEEE
T ss_pred EE--E-EeCCCc------e-eEEecC-CC-------EEEEEC--C-CCEEEEEcCCCCeEEEEEEeCCCCcccccccccE
Confidence 32 1 331110 0 111112 21 122221 1 246888999875321 122 1 111222234
Q ss_pred EeCCEEEEEEeeccccccccccceEEEEEEeCCCCcEEEeccCCHHHHHhh--c--CCCceEEE---ecCCEEEEEEccc
Q 041767 226 GVGNRILMIGGLKSSFTLNASCSTILILRLDLDLLEWEEAGRMPVEMYRCF--S--ESSKFKVF---GMGDKVCFSAKRV 298 (341)
Q Consensus 226 ~~~g~l~vvgg~~~~~~~~~~~~~~~vw~~d~~~~~W~~~~~mp~~~~~~~--~--~~~~~~~~---~~~~~i~~~~~~~ 298 (341)
+.+|+||+-....+ +|-++|+.+.+=+..-++........ . ....+.-. ..++.+|+.++..
T Consensus 188 ~~dG~lyanvw~s~-----------~I~vIDp~TG~V~~~Idl~~L~~~~~~~~~~~~~vlNGIA~dp~~~rlfVTGK~W 256 (268)
T 3nok_A 188 CANGVIYANIWHSS-----------DVLEIDPATGTVVGVIDASALTRAVAGQVTNPEAVLNGIAVEPGSGRIFMTGKLW 256 (268)
T ss_dssp EETTEEEEEETTCS-----------EEEEECTTTCBEEEEEECHHHHHHHTTTCCCTTCCEEEEEECTTTCCEEEEETTC
T ss_pred EeCCEEEEEECCCC-----------eEEEEeCCCCcEEEEEECCCCcccccccccCcCCceEEEEEcCCCCEEEEeCCCC
Confidence 45889995432111 46788997766444444432111111 0 11122222 2357888888775
Q ss_pred CcE
Q 041767 299 GRL 301 (341)
Q Consensus 299 ~~v 301 (341)
..+
T Consensus 257 p~~ 259 (268)
T 3nok_A 257 PRL 259 (268)
T ss_dssp SEE
T ss_pred Cce
Confidence 443
No 32
>3mbr_X Glutamine cyclotransferase; beta-propeller; 1.44A {Xanthomonas campestris}
Probab=90.65 E-value=6.6 Score=32.69 Aligned_cols=190 Identities=13% Similarity=-0.030 Sum_probs=97.8
Q ss_pred eeeccCCEEEEecCCCCCCCCCceEEEEcCcccceecCCCCCCCCceeE--EEEEcCCCcEEEEc---CeEEEEEcCCCc
Q 041767 76 PVASSPGLIYLWGDLPDSPESNKSLIACNPLTRLYRVLPQLGSAWSKHG--SVLVDSLNKVMVLT---ELAALFFSNSNH 150 (341)
Q Consensus 76 ~~~~~~glv~~~g~~~~~~~~~~~~~v~nP~t~~w~~lp~~~~~~~~~~--~~~~~~~~ki~~~g---~~~evYd~~t~~ 150 (341)
.+...+|.||...|. .+.+.+.++|+.|++-..--+++. ..++ .... ++++|++. +.+.+||.++-+
T Consensus 25 GL~~~~~~LyestG~----~g~S~v~~vD~~tgkv~~~~~l~~--~~fgeGi~~~--~~~ly~ltw~~~~v~v~D~~tl~ 96 (243)
T 3mbr_X 25 GLFYLRGHLYESTGE----TGRSSVRKVDLETGRILQRAEVPP--PYFGAGIVAW--RDRLIQLTWRNHEGFVYDLATLT 96 (243)
T ss_dssp EEEEETTEEEEEECC----TTSCEEEEEETTTCCEEEEEECCT--TCCEEEEEEE--TTEEEEEESSSSEEEEEETTTTE
T ss_pred cEEEECCEEEEECCC----CCCceEEEEECCCCCEEEEEeCCC--CcceeEEEEe--CCEEEEEEeeCCEEEEEECCcCc
Confidence 466677999988764 235789999999998754333331 1233 2333 68999985 579999998765
Q ss_pred cccccccCCCCCCCcccccCceEEEeecCCCcCCcceeeEeecccCCCCceeEEEcccccc-ccccc-----ccCCccEE
Q 041767 151 WLKFSSNLPSKPRSPILMLNSVYALCDVGSPWRSQWKLFCCNLSSLTNSQQFWHCLERREW-GDVFD-----ILKRPRLV 224 (341)
Q Consensus 151 W~~~~~~~p~~~r~~~~~~~~~y~~~~~G~~~~~~~~~~~~~~~~~~~~~v~~yD~~~~~W-~~~~~-----~~~~~~lv 224 (341)
=. .. ++... .+ .. +|..|. .++.. . . .+.+..+|+++.+= +.+.- ......-+
T Consensus 97 ~~--~t-i~~~~------~G-wg-lt~dg~-------~L~vS-d-g-s~~l~~iDp~t~~~~~~I~V~~~g~~~~~lNeL 155 (243)
T 3mbr_X 97 PR--AR-FRYPG------EG-WA-LTSDDS-------HLYMS-D-G-TAVIRKLDPDTLQQVGSIKVTAGGRPLDNLNEL 155 (243)
T ss_dssp EE--EE-EECSS------CC-CE-EEECSS-------CEEEE-C-S-SSEEEEECTTTCCEEEEEECEETTEECCCEEEE
T ss_pred EE--EE-EeCCC------Cc-eE-EeeCCC-------EEEEE-C-C-CCeEEEEeCCCCeEEEEEEEccCCcccccceee
Confidence 43 21 33110 01 11 122131 12221 1 1 24688899987432 11221 11122234
Q ss_pred EEeCCEEEEEEeeccccccccccceEEEEEEeCCCCcEEEeccCCHHHHHh-h---cCCC---ceEEEecCCEEEEEEcc
Q 041767 225 RGVGNRILMIGGLKSSFTLNASCSTILILRLDLDLLEWEEAGRMPVEMYRC-F---SESS---KFKVFGMGDKVCFSAKR 297 (341)
Q Consensus 225 ~~~~g~l~vvgg~~~~~~~~~~~~~~~vw~~d~~~~~W~~~~~mp~~~~~~-~---~~~~---~~~~~~~~~~i~~~~~~ 297 (341)
++.+|+||+-....+ .|-++|+.+.+=...-++....... . .... .+..-..++.+|+.++.
T Consensus 156 e~~~G~lyanvw~s~-----------~I~vIDp~tG~V~~~idl~~l~~~~~~~~~~~~~vlNGIA~d~~~~~lfVTGK~ 224 (243)
T 3mbr_X 156 EWVNGELLANVWLTS-----------RIARIDPASGKVVAWIDLQALVPDADALTDSTNDVLNGIAFDAEHDRLFVTGKR 224 (243)
T ss_dssp EEETTEEEEEETTTT-----------EEEEECTTTCBEEEEEECGGGSTTTTSCCCTTSSCEEEEEEETTTTEEEEEETT
T ss_pred EEeCCEEEEEECCCC-----------eEEEEECCCCCEEEEEECCcCccccccccCCcCCceEEEEEcCCCCEEEEECCC
Confidence 455899995432211 4667888776544333332110000 0 0011 23333346889998887
Q ss_pred cCcEEEEEee
Q 041767 298 VGRLALWECE 307 (341)
Q Consensus 298 ~~~v~~yD~~ 307 (341)
... +|.++
T Consensus 225 wp~--~~~v~ 232 (243)
T 3mbr_X 225 WPM--LYEIR 232 (243)
T ss_dssp CSE--EEEEE
T ss_pred CCc--EEEEE
Confidence 543 44544
No 33
>3jrp_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum; 2.60A {Saccharomyces cerevisiae}
Probab=90.29 E-value=8.2 Score=33.22 Aligned_cols=59 Identities=7% Similarity=0.071 Sum_probs=32.3
Q ss_pred CceEEEEcCcccceecCCCCCCCCceeEEEEEcCC--CcEEEEc---CeEEEEEcCCCcccccc
Q 041767 97 NKSLIACNPLTRLYRVLPQLGSAWSKHGSVLVDSL--NKVMVLT---ELAALFFSNSNHWLKFS 155 (341)
Q Consensus 97 ~~~~~v~nP~t~~w~~lp~~~~~~~~~~~~~~~~~--~ki~~~g---~~~evYd~~t~~W~~~~ 155 (341)
...+.+||..+.+.+.+..+.........+..... ++.++.+ +.+.+||..++.|..+.
T Consensus 32 dg~i~iw~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~ 95 (379)
T 3jrp_A 32 DKTIKIFEVEGETHKLIDTLTGHEGPVWRVDWAHPKFGTILASCSYDGKVLIWKEENGRWSQIA 95 (379)
T ss_dssp TSCEEEEEEETTEEEEEEEECCCSSCEEEEEECCGGGCSEEEEEETTSCEEEEEEETTEEEEEE
T ss_pred CCcEEEEecCCCcceeeeEecCCCCcEEEEEeCCCCCCCEEEEeccCCEEEEEEcCCCceeEee
Confidence 45688888775555444333211111112222222 5555544 57999999999887665
No 34
>2qc5_A Streptogramin B lactonase; beta propeller, lyase; 1.80A {Staphylococcus cohnii}
Probab=90.01 E-value=7.4 Score=32.31 Aligned_cols=95 Identities=8% Similarity=0.041 Sum_probs=54.9
Q ss_pred ceEEEeeCCCCcEEEeeCCCCCCCCcceeeccCCEEEEecCCCCCCCCCceEEEEcCcccceecCCCCCCCCceeEEEEE
Q 041767 49 AALHVYDPNQNQWLRFDLSFLPFRSLHPVASSPGLIYLWGDLPDSPESNKSLIACNPLTRLYRVLPQLGSAWSKHGSVLV 128 (341)
Q Consensus 49 ~~~~~yd~~~~~W~~l~~~~~p~~~~~~~~~~~glv~~~g~~~~~~~~~~~~~v~nP~t~~w~~lp~~~~~~~~~~~~~~ 128 (341)
..+..||+. .+...++.+........+....+|.|++.... ...+.++|+. ++...+...... .....+..
T Consensus 41 ~~v~~~~~~-~~~~~~~~~~~~~~~~~i~~~~~g~l~v~~~~------~~~v~~~d~~-g~~~~~~~~~~~-~~~~~i~~ 111 (300)
T 2qc5_A 41 NKISSLDQS-GRIKEFEVPTPDAKVMCLIVSSLGDIWFTENG------ANKIGKLSKK-GGFTEYPLPQPD-SGPYGITE 111 (300)
T ss_dssp TEEEEECTT-SCEEEEECSSTTCCEEEEEECTTSCEEEEETT------TTEEEEECTT-SCEEEEECSSTT-CCEEEEEE
T ss_pred CeEEEECCC-CceEEEECCCCCCcceeEEECCCCCEEEEecC------CCeEEEECCC-CCeEEecCCCCC-CCCccceE
Confidence 457788988 77776654321111222233356777776532 4679999998 666543321111 12224445
Q ss_pred cCCCcEEEEc---CeEEEEEcCCCcccc
Q 041767 129 DSLNKVMVLT---ELAALFFSNSNHWLK 153 (341)
Q Consensus 129 ~~~~ki~~~g---~~~evYd~~t~~W~~ 153 (341)
+.++++++.. +.+.+||+. ++...
T Consensus 112 ~~~g~l~v~~~~~~~i~~~~~~-g~~~~ 138 (300)
T 2qc5_A 112 GLNGDIWFTQLNGDRIGKLTAD-GTIYE 138 (300)
T ss_dssp CSTTCEEEEETTTTEEEEECTT-SCEEE
T ss_pred CCCCCEEEEccCCCeEEEECCC-CCEEE
Confidence 5667888864 468889887 55543
No 35
>1l0q_A Surface layer protein; SLP, S-layer, 7-bladed beta-propeller superfamily, protein binding; HET: YCM; 2.40A {Methanosarcina mazei} SCOP: b.1.3.1 b.69.2.3
Probab=89.33 E-value=10 Score=33.01 Aligned_cols=92 Identities=17% Similarity=0.144 Sum_probs=51.8
Q ss_pred ceEEEeeCCCCcEEE-eeCCCCCCCCcceeeccCC-EEEEecCCCCCCCCCceEEEEcCcccceecCCCCCCCCceeEEE
Q 041767 49 AALHVYDPNQNQWLR-FDLSFLPFRSLHPVASSPG-LIYLWGDLPDSPESNKSLIACNPLTRLYRVLPQLGSAWSKHGSV 126 (341)
Q Consensus 49 ~~~~~yd~~~~~W~~-l~~~~~p~~~~~~~~~~~g-lv~~~g~~~~~~~~~~~~~v~nP~t~~w~~lp~~~~~~~~~~~~ 126 (341)
..+.++|..+++-.. ++... ....+.-+-+| .|++.++. ...+.+||+.+++....-+... ....+
T Consensus 12 ~~v~v~d~~~~~~~~~~~~~~---~~~~~~~s~dg~~l~~~~~~------d~~i~v~d~~~~~~~~~~~~~~---~v~~~ 79 (391)
T 1l0q_A 12 DNISVIDVTSNKVTATIPVGS---NPMGAVISPDGTKVYVANAH------SNDVSIIDTATNNVIATVPAGS---SPQGV 79 (391)
T ss_dssp TEEEEEETTTTEEEEEEECSS---SEEEEEECTTSSEEEEEEGG------GTEEEEEETTTTEEEEEEECSS---SEEEE
T ss_pred CEEEEEECCCCeEEEEeecCC---CcceEEECCCCCEEEEECCC------CCeEEEEECCCCeEEEEEECCC---Cccce
Confidence 567888988775432 33211 11222223344 67666543 5689999998887654322221 11223
Q ss_pred EEcCCC-cEEEEc---CeEEEEEcCCCccc
Q 041767 127 LVDSLN-KVMVLT---ELAALFFSNSNHWL 152 (341)
Q Consensus 127 ~~~~~~-ki~~~g---~~~evYd~~t~~W~ 152 (341)
...+++ ++++.+ +.+.+||..+++-.
T Consensus 80 ~~spdg~~l~~~~~~~~~v~v~d~~~~~~~ 109 (391)
T 1l0q_A 80 AVSPDGKQVYVTNMASSTLSVIDTTSNTVA 109 (391)
T ss_dssp EECTTSSEEEEEETTTTEEEEEETTTTEEE
T ss_pred EECCCCCEEEEEECCCCEEEEEECCCCeEE
Confidence 334455 566665 57999999887653
No 36
>3u4y_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomi CS, MCSG; 2.99A {Desulfotomaculum acetoxidans}
Probab=88.87 E-value=9.9 Score=32.20 Aligned_cols=63 Identities=10% Similarity=-0.070 Sum_probs=40.6
Q ss_pred cCCEEEEecCCCCCCCCCceEEEEcCcccceecCCCCCCCCceeEEEEEcCCCc-EEEEc---CeEEEEEcCCCcc
Q 041767 80 SPGLIYLWGDLPDSPESNKSLIACNPLTRLYRVLPQLGSAWSKHGSVLVDSLNK-VMVLT---ELAALFFSNSNHW 151 (341)
Q Consensus 80 ~~glv~~~g~~~~~~~~~~~~~v~nP~t~~w~~lp~~~~~~~~~~~~~~~~~~k-i~~~g---~~~evYd~~t~~W 151 (341)
..+.+|+.+.. ...+.++|+.|++....-+.+ .... .+..+++++ +|+.+ +.+.+||..+++-
T Consensus 8 ~~~~~~v~~~~------~~~v~~~d~~~~~~~~~~~~~--~~~~-~~~~s~dg~~l~~~~~~~~~i~~~d~~~~~~ 74 (331)
T 3u4y_A 8 TSNFGIVVEQH------LRRISFFSTDTLEILNQITLG--YDFV-DTAITSDCSNVVVTSDFCQTLVQIETQLEPP 74 (331)
T ss_dssp CCCEEEEEEGG------GTEEEEEETTTCCEEEEEECC--CCEE-EEEECSSSCEEEEEESTTCEEEEEECSSSSC
T ss_pred CCCEEEEEecC------CCeEEEEeCcccceeeeEEcc--CCcc-eEEEcCCCCEEEEEeCCCCeEEEEECCCCce
Confidence 45677777653 568999999998875543332 1122 334445564 77765 3799999988764
No 37
>3u4y_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomi CS, MCSG; 2.99A {Desulfotomaculum acetoxidans}
Probab=88.78 E-value=10 Score=32.15 Aligned_cols=234 Identities=7% Similarity=0.003 Sum_probs=104.7
Q ss_pred ceEEEeeCCCCcE--EEeeCCCCCCCCcce-eeccCCEEEEecCCCCCCCCCceEEEEcCcccceecCCCCCCCCceeEE
Q 041767 49 AALHVYDPNQNQW--LRFDLSFLPFRSLHP-VASSPGLIYLWGDLPDSPESNKSLIACNPLTRLYRVLPQLGSAWSKHGS 125 (341)
Q Consensus 49 ~~~~~yd~~~~~W--~~l~~~~~p~~~~~~-~~~~~glv~~~g~~~~~~~~~~~~~v~nP~t~~w~~lp~~~~~~~~~~~ 125 (341)
..+..+|+.+.+- ..+.....|. ..+ +...+..|+ .+.. ......+.++|+.+++....-+... ....
T Consensus 62 ~~i~~~d~~~~~~~~~~~~~~~~~~--~~~~~s~dg~~l~-~~~~---~~~~~~i~v~d~~~~~~~~~~~~~~---~~~~ 132 (331)
T 3u4y_A 62 QTLVQIETQLEPPKVVAIQEGQSSM--ADVDITPDDQFAV-TVTG---LNHPFNMQSYSFLKNKFISTIPIPY---DAVG 132 (331)
T ss_dssp CEEEEEECSSSSCEEEEEEECSSCC--CCEEECTTSSEEE-ECCC---SSSSCEEEEEETTTTEEEEEEECCT---TEEE
T ss_pred CeEEEEECCCCceeEEecccCCCCc--cceEECCCCCEEE-EecC---CCCcccEEEEECCCCCeEEEEECCC---Cccc
Confidence 4577888877763 3333222222 212 333344566 4322 0012289999998887654322211 1123
Q ss_pred EEEcCCC-cEEEEc---Ce-EEEEEcCCCccc-cc-cccCCCCCCCcccccCceEEEeecCCCcCCcceeeEeecccCCC
Q 041767 126 VLVDSLN-KVMVLT---EL-AALFFSNSNHWL-KF-SSNLPSKPRSPILMLNSVYALCDVGSPWRSQWKLFCCNLSSLTN 198 (341)
Q Consensus 126 ~~~~~~~-ki~~~g---~~-~evYd~~t~~W~-~~-~~~~p~~~r~~~~~~~~~y~~~~~G~~~~~~~~~~~~~~~~~~~ 198 (341)
+..++++ .+|+.+ +. +.+|+...+.-. .. ...++.. ..+ ....+...|. .++..... .
T Consensus 133 ~~~spdg~~l~~~~~~~~~~i~~~~~~~~g~~~~~~~~~~~~~-~~~-----~~~~~spdg~-------~l~v~~~~--~ 197 (331)
T 3u4y_A 133 IAISPNGNGLILIDRSSANTVRRFKIDADGVLFDTGQEFISGG-TRP-----FNITFTPDGN-------FAFVANLI--G 197 (331)
T ss_dssp EEECTTSSCEEEEEETTTTEEEEEEECTTCCEEEEEEEEECSS-SSE-----EEEEECTTSS-------EEEEEETT--T
T ss_pred eEECCCCCEEEEEecCCCceEEEEEECCCCcEeecCCccccCC-CCc-----cceEECCCCC-------EEEEEeCC--C
Confidence 3344555 477764 45 888886543211 00 0001100 000 0011111121 11111111 1
Q ss_pred CceeEEEcccccc---c-ccccccCCcc-EEEEeCCE-EEEEEeeccccccccccceEEEEEEeCCCCcEEEeccCCHHH
Q 041767 199 SQQFWHCLERREW---G-DVFDILKRPR-LVRGVGNR-ILMIGGLKSSFTLNASCSTILILRLDLDLLEWEEAGRMPVEM 272 (341)
Q Consensus 199 ~~v~~yD~~~~~W---~-~~~~~~~~~~-lv~~~~g~-l~vvgg~~~~~~~~~~~~~~~vw~~d~~~~~W~~~~~mp~~~ 272 (341)
+.+..||+++++. . .++.. ..+. +.-.-+|+ ||+... .. .. |+.+|.++.+.+.+..++...
T Consensus 198 ~~v~v~d~~~~~~~~~~~~~~~~-~~~~~~~~spdg~~l~v~~~-~~--------~~--i~~~d~~~~~~~~~~~~~~~~ 265 (331)
T 3u4y_A 198 NSIGILETQNPENITLLNAVGTN-NLPGTIVVSRDGSTVYVLTE-ST--------VD--VFNFNQLSGTLSFVKSFGHGL 265 (331)
T ss_dssp TEEEEEECSSTTSCEEEEEEECS-SCCCCEEECTTSSEEEEECS-SE--------EE--EEEEETTTTEEEEEEEEECCC
T ss_pred CeEEEEECCCCcccceeeeccCC-CCCceEEECCCCCEEEEEEc-CC--------CE--EEEEECCCCceeeeccccccc
Confidence 3578899887654 1 12211 1122 22212455 555432 11 12 344566666665444333210
Q ss_pred H---HhhcCCCceEEEecCCEEEEEEcccCcEEEEEeeeCCCCeeEEcCCCC
Q 041767 273 Y---RCFSESSKFKVFGMGDKVCFSAKRVGRLALWECEKGGGGEWRWIDGLP 321 (341)
Q Consensus 273 ~---~~~~~~~~~~~~~~~~~i~~~~~~~~~v~~yD~~~~~~~~W~~~~~~~ 321 (341)
. ........+.....+..+++.....+.+.+||+. .+.=..+..+.
T Consensus 266 ~~~~~~~~~~~~~~~spdg~~l~v~~~~~~~v~v~d~~---~~~~~~~~~~~ 314 (331)
T 3u4y_A 266 LIDPRPLFGANQMALNKTETKLFISANISRELKVFTIS---GKVVGYVAGIE 314 (331)
T ss_dssp CCCCGGGTTCCCEEECTTSSEEEEEETTTTEEEEEETT---SCEEEECTTCC
T ss_pred ccCCCCcccccceEECCCCCEEEEecCCCCcEEEEEec---CCcccceeccc
Confidence 0 0000011233344567788877666789999999 66655565554
No 38
>2z2n_A Virginiamycin B lyase; seven-bladed beta-propeller, antibiotic resistance, E mechanism, virginiamycin B hydrolase streptogramin; HET: MSE; 1.65A {Staphylococcus aureus} PDB: 2z2o_A 2z2p_A*
Probab=88.42 E-value=9.7 Score=31.54 Aligned_cols=213 Identities=9% Similarity=0.053 Sum_probs=102.6
Q ss_pred ceEEEeeCCCCcEEEeeCCCCCCCCcceeeccCCEEEEecCCCCCCCCCceEEEEcCcccceecCCCCCCCCceeEEEEE
Q 041767 49 AALHVYDPNQNQWLRFDLSFLPFRSLHPVASSPGLIYLWGDLPDSPESNKSLIACNPLTRLYRVLPQLGSAWSKHGSVLV 128 (341)
Q Consensus 49 ~~~~~yd~~~~~W~~l~~~~~p~~~~~~~~~~~glv~~~g~~~~~~~~~~~~~v~nP~t~~w~~lp~~~~~~~~~~~~~~ 128 (341)
..+..||+. .....+..+........+....+|.+++.... ...+.++|+. ++.+.+.... .......+..
T Consensus 36 ~~v~~~d~~-~~~~~~~~~~~~~~~~~i~~~~~g~l~v~~~~------~~~i~~~~~~-g~~~~~~~~~-~~~~~~~i~~ 106 (299)
T 2z2n_A 36 NMISCINLD-GKITEYPLPTPDAKVMCLTISSDGEVWFTENA------ANKIGRITKK-GIIKEYTLPN-PDSAPYGITE 106 (299)
T ss_dssp TEEEEECTT-CCEEEEECSSTTCCEEEEEECTTSCEEEEETT------TTEEEEECTT-SCEEEEECSS-TTCCEEEEEE
T ss_pred CcEEEEcCC-CCeEEecCCcccCceeeEEECCCCCEEEeCCC------CCeEEEECCC-CcEEEEeCCC-cCCCceeeEE
Confidence 457888988 77777664321112223233356777776532 4578999986 4444433111 1112224445
Q ss_pred cCCCcEEEEc---CeEEEEEcCCCccccccccCCCCCCCcccccCceEEEeecCCCcCCcceeeEeecccCCCCceeEEE
Q 041767 129 DSLNKVMVLT---ELAALFFSNSNHWLKFSSNLPSKPRSPILMLNSVYALCDVGSPWRSQWKLFCCNLSSLTNSQQFWHC 205 (341)
Q Consensus 129 ~~~~ki~~~g---~~~evYd~~t~~W~~~~~~~p~~~r~~~~~~~~~y~~~~~G~~~~~~~~~~~~~~~~~~~~~v~~yD 205 (341)
++++++++.. +.+.+||+ +++...+. .+...... ..+ ++...|. ++..... .+.+..||
T Consensus 107 ~~~g~l~v~~~~~~~i~~~d~-~g~~~~~~--~~~~~~~~----~~i-~~~~~g~--------l~v~~~~--~~~i~~~~ 168 (299)
T 2z2n_A 107 GPNGDIWFTEMNGNRIGRITD-DGKIREYE--LPNKGSYP----SFI-TLGSDNA--------LWFTENQ--NNAIGRIT 168 (299)
T ss_dssp CTTSCEEEEETTTTEEEEECT-TCCEEEEE--CSSTTCCE----EEE-EECTTSC--------EEEEETT--TTEEEEEC
T ss_pred CCCCCEEEEecCCceEEEECC-CCCEEEec--CCCCCCCC----ceE-EEcCCCC--------EEEEeCC--CCEEEEEc
Confidence 5667888864 47889998 66554432 22111100 011 1111121 1111110 12577888
Q ss_pred cccccccccc--cccCCccEEEE-eCCEEEEEEeeccccccccccceEEEEEEeCCCCcEEEeccCCHHHHHhhcCCCce
Q 041767 206 LERREWGDVF--DILKRPRLVRG-VGNRILMIGGLKSSFTLNASCSTILILRLDLDLLEWEEAGRMPVEMYRCFSESSKF 282 (341)
Q Consensus 206 ~~~~~W~~~~--~~~~~~~lv~~-~~g~l~vvgg~~~~~~~~~~~~~~~vw~~d~~~~~W~~~~~mp~~~~~~~~~~~~~ 282 (341)
+ +++...+. .....+.-+.. .+|+||+...... .|+.+|+ +...+.+. ++.. .. ...-
T Consensus 169 ~-~g~~~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~-----------~i~~~~~-~g~~~~~~-~~~~----~~-~~~~ 229 (299)
T 2z2n_A 169 E-SGDITEFKIPTPASGPVGITKGNDDALWFVEIIGN-----------KIGRITT-SGEITEFK-IPTP----NA-RPHA 229 (299)
T ss_dssp T-TCCEEEEECSSTTCCEEEEEECTTSSEEEEETTTT-----------EEEEECT-TCCEEEEE-CSST----TC-CEEE
T ss_pred C-CCcEEEeeCCCCCCcceeEEECCCCCEEEEccCCc-----------eEEEECC-CCcEEEEE-CCCC----CC-Ccee
Confidence 8 66554432 11222322322 2578887653211 3556777 55565542 2211 00 0011
Q ss_pred EEEecCCEEEEEEcccCcEEEEEee
Q 041767 283 KVFGMGDKVCFSAKRVGRLALWECE 307 (341)
Q Consensus 283 ~~~~~~~~i~~~~~~~~~v~~yD~~ 307 (341)
.++...+.+|+.....+.+..||+.
T Consensus 230 i~~~~~g~l~v~~~~~~~i~~~d~~ 254 (299)
T 2z2n_A 230 ITAGAGIDLWFTEWGANKIGRLTSN 254 (299)
T ss_dssp EEECSTTCEEEEETTTTEEEEEETT
T ss_pred EEECCCCCEEEeccCCceEEEECCC
Confidence 1122345688776445678889885
No 39
>1ri6_A Putative isomerase YBHE; 7-bladed propeller, enzyme, PSI, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.00A {Escherichia coli} SCOP: b.69.11.1
Probab=88.35 E-value=11 Score=31.94 Aligned_cols=81 Identities=15% Similarity=0.053 Sum_probs=46.5
Q ss_pred eEEEEEEeCCCCcEEEeccCCHHHHHhhcCCCceEEEecCCEEEEEEcccCcEEEEEeeeCCCCeeEEcCCCCCCCCCCe
Q 041767 249 TILILRLDLDLLEWEEAGRMPVEMYRCFSESSKFKVFGMGDKVCFSAKRVGRLALWECEKGGGGEWRWIDGLPGIGDGPC 328 (341)
Q Consensus 249 ~~~vw~~d~~~~~W~~~~~mp~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~v~~yD~~~~~~~~W~~~~~~~~~~~~~~ 328 (341)
.+.+|.++..+.+.+.+..++.... ...+.....+..+++.....+.+.+|++... +.+++.+...+.. ...
T Consensus 254 ~i~v~d~~~~~~~~~~~~~~~~~~~-----~~~~~~s~dg~~l~~~~~~~~~v~v~~~d~~-~g~~~~~~~~~~g--~~p 325 (343)
T 1ri6_A 254 LITVFSVSEDGSVLSKEGFQPTETQ-----PRGFNVDHSGKYLIAAGQKSHHISVYEIVGE-QGLLHEKGRYAVG--QGP 325 (343)
T ss_dssp EEEEEEECTTSCCEEEEEEEECSSS-----CCCEEECTTSSEEEEECTTTCEEEEEEEETT-TTEEEEEEEEECS--SSC
T ss_pred EEEEEEEcCCCCceEEeeeecCCCc-----cceEEECCCCCEEEEecCCCCeEEEEEEcCC-CceeeEccccccC--CCC
Confidence 4788988765667777765543210 1123333345667776644567888855411 5677777665531 245
Q ss_pred eeEEeeccc
Q 041767 329 RGFVYEASL 337 (341)
Q Consensus 329 ~~~~~~p~~ 337 (341)
.+++|.|..
T Consensus 326 ~~i~~~~~~ 334 (343)
T 1ri6_A 326 MWVVVNAHE 334 (343)
T ss_dssp CEEEEEEEC
T ss_pred eeEEEEccc
Confidence 677777653
No 40
>3bws_A Protein LP49; two-domain, immunoglobulin-like, 7-bladed beta propeller, unknown function; 1.99A {Leptospira interrogans}
Probab=88.08 E-value=14 Score=32.78 Aligned_cols=96 Identities=7% Similarity=-0.106 Sum_probs=52.9
Q ss_pred eEEEeeCCCCcEEEeeCCCCCCCCcceeeccCCEEEEecCCCCCCCCCceEEEEcCcccceecCCCCCC---CCceeEEE
Q 041767 50 ALHVYDPNQNQWLRFDLSFLPFRSLHPVASSPGLIYLWGDLPDSPESNKSLIACNPLTRLYRVLPQLGS---AWSKHGSV 126 (341)
Q Consensus 50 ~~~~yd~~~~~W~~l~~~~~p~~~~~~~~~~~glv~~~g~~~~~~~~~~~~~v~nP~t~~w~~lp~~~~---~~~~~~~~ 126 (341)
.++.+|+.+..+..+..-..+.....+..+-++.+++.++. ...+.+||+.+++.....+... .......+
T Consensus 102 ~l~~~d~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~------~~~i~~~d~~~g~~~~~~~~~~~~~~~~~v~~~ 175 (433)
T 3bws_A 102 KLIALDKEGITHRFISRFKTGFQPKSVRFIDNTRLAIPLLE------DEGMDVLDINSGQTVRLSPPEKYKKKLGFVETI 175 (433)
T ss_dssp CEEECCBTTCSEEEEEEEECSSCBCCCEESSSSEEEEEBTT------SSSEEEEETTTCCEEEECCCHHHHTTCCEEEEE
T ss_pred EEEEECCCCCcceEEEEEcCCCCceEEEEeCCCeEEEEeCC------CCeEEEEECCCCeEeeecCcccccccCCceeEE
Confidence 56667776655444331101111122222237888877654 4579999999988765433311 11111122
Q ss_pred EEcCCCcEEEEc---CeEEEEEcCCCcc
Q 041767 127 LVDSLNKVMVLT---ELAALFFSNSNHW 151 (341)
Q Consensus 127 ~~~~~~ki~~~g---~~~evYd~~t~~W 151 (341)
....++++++.+ +.+.+||.++.+-
T Consensus 176 ~~~~~~~~~~s~~~d~~v~~~d~~~~~~ 203 (433)
T 3bws_A 176 SIPEHNELWVSQMQANAVHVFDLKTLAY 203 (433)
T ss_dssp EEGGGTEEEEEEGGGTEEEEEETTTCCE
T ss_pred EEcCCCEEEEEECCCCEEEEEECCCceE
Confidence 334467777765 5799999887653
No 41
>1ri6_A Putative isomerase YBHE; 7-bladed propeller, enzyme, PSI, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.00A {Escherichia coli} SCOP: b.69.11.1
Probab=87.39 E-value=12 Score=31.54 Aligned_cols=61 Identities=8% Similarity=-0.032 Sum_probs=32.7
Q ss_pred cCCEEEEecCCCCCCCCCceEEEEcCc--ccceecCCCCCCCCceeEEEEEcCCCc-EEEEc---CeEEEEEcC
Q 041767 80 SPGLIYLWGDLPDSPESNKSLIACNPL--TRLYRVLPQLGSAWSKHGSVLVDSLNK-VMVLT---ELAALFFSN 147 (341)
Q Consensus 80 ~~glv~~~g~~~~~~~~~~~~~v~nP~--t~~w~~lp~~~~~~~~~~~~~~~~~~k-i~~~g---~~~evYd~~ 147 (341)
.+..|++.+.. ...+.+|+.. +++.+.+..+.... ....+..+++++ +++.+ +.+.+||..
T Consensus 48 dg~~l~~~~~~------~~~v~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~s~dg~~l~~~~~~~~~i~~~d~~ 114 (343)
T 1ri6_A 48 DKRYLYVGVRP------EFRVLAYRIAPDDGALTFAAESALPG-SLTHISTDHQGQFVFVGSYNAGNVSVTRLE 114 (343)
T ss_dssp TSSEEEEEETT------TTEEEEEEECTTTCCEEEEEEEECSS-CCSEEEECTTSSEEEEEETTTTEEEEEEEE
T ss_pred CCCEEEEeecC------CCeEEEEEecCCCCceeeccccccCC-CCcEEEEcCCCCEEEEEecCCCeEEEEECC
Confidence 34456665532 3577787765 77776554332111 112333444554 66654 468889884
No 42
>1l0q_A Surface layer protein; SLP, S-layer, 7-bladed beta-propeller superfamily, protein binding; HET: YCM; 2.40A {Methanosarcina mazei} SCOP: b.1.3.1 b.69.2.3
Probab=86.82 E-value=15 Score=31.94 Aligned_cols=62 Identities=11% Similarity=0.136 Sum_probs=37.1
Q ss_pred CEEEEecCCCCCCCCCceEEEEcCcccceecCCCCCCCCceeEEEEEcCCC-cEEEEc---CeEEEEEcCCCccc
Q 041767 82 GLIYLWGDLPDSPESNKSLIACNPLTRLYRVLPQLGSAWSKHGSVLVDSLN-KVMVLT---ELAALFFSNSNHWL 152 (341)
Q Consensus 82 glv~~~g~~~~~~~~~~~~~v~nP~t~~w~~lp~~~~~~~~~~~~~~~~~~-ki~~~g---~~~evYd~~t~~W~ 152 (341)
+++++.++. .+.+.+||..+++....-+... ....+...+++ .+++.+ +.+.+||..+++-.
T Consensus 2 ~~l~vs~~~------d~~v~v~d~~~~~~~~~~~~~~---~~~~~~~s~dg~~l~~~~~~d~~i~v~d~~~~~~~ 67 (391)
T 1l0q_A 2 TFAYIANSE------SDNISVIDVTSNKVTATIPVGS---NPMGAVISPDGTKVYVANAHSNDVSIIDTATNNVI 67 (391)
T ss_dssp EEEEEEETT------TTEEEEEETTTTEEEEEEECSS---SEEEEEECTTSSEEEEEEGGGTEEEEEETTTTEEE
T ss_pred CEEEEEcCC------CCEEEEEECCCCeEEEEeecCC---CcceEEECCCCCEEEEECCCCCeEEEEECCCCeEE
Confidence 456666654 5789999998876543222111 11233344555 466664 57999999877653
No 43
>3jrp_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum; 2.60A {Saccharomyces cerevisiae}
Probab=86.05 E-value=16 Score=31.38 Aligned_cols=54 Identities=6% Similarity=0.009 Sum_probs=31.5
Q ss_pred CceEEEEcCcccceecCCCCCCCCceeEEEEEcCC--CcEEEEc---CeEEEEEcCCCc
Q 041767 97 NKSLIACNPLTRLYRVLPQLGSAWSKHGSVLVDSL--NKVMVLT---ELAALFFSNSNH 150 (341)
Q Consensus 97 ~~~~~v~nP~t~~w~~lp~~~~~~~~~~~~~~~~~--~ki~~~g---~~~evYd~~t~~ 150 (341)
...+.+||..++++..+..+.........+...++ ++.++.+ +.+.+||..+..
T Consensus 78 dg~v~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~d~~i~v~d~~~~~ 136 (379)
T 3jrp_A 78 DGKVLIWKEENGRWSQIAVHAVHSASVNSVQWAPHEYGPLLLVASSDGKVSVVEFKENG 136 (379)
T ss_dssp TSCEEEEEEETTEEEEEEEECCCSSCEEEEEECCGGGCSEEEEEETTSEEEEEECCTTS
T ss_pred CCEEEEEEcCCCceeEeeeecCCCcceEEEEeCCCCCCCEEEEecCCCcEEEEecCCCC
Confidence 56899999999887654433211111112223334 5555544 579999988764
No 44
>2qc5_A Streptogramin B lactonase; beta propeller, lyase; 1.80A {Staphylococcus cohnii}
Probab=85.22 E-value=15 Score=30.39 Aligned_cols=96 Identities=6% Similarity=-0.071 Sum_probs=54.0
Q ss_pred ceEEEeeCCCCcEEEeeCCCCCCCCcceeeccCCEEEEecCCCCCCCCCceEEEEcCcccceecCCCCCCCCceeEEEEE
Q 041767 49 AALHVYDPNQNQWLRFDLSFLPFRSLHPVASSPGLIYLWGDLPDSPESNKSLIACNPLTRLYRVLPQLGSAWSKHGSVLV 128 (341)
Q Consensus 49 ~~~~~yd~~~~~W~~l~~~~~p~~~~~~~~~~~glv~~~g~~~~~~~~~~~~~v~nP~t~~w~~lp~~~~~~~~~~~~~~ 128 (341)
..+..||+. .+...+..+........+....+|.+++.... ...+.++|+. ++...... +........+..
T Consensus 83 ~~v~~~d~~-g~~~~~~~~~~~~~~~~i~~~~~g~l~v~~~~------~~~i~~~~~~-g~~~~~~~-~~~~~~~~~i~~ 153 (300)
T 2qc5_A 83 NKIGKLSKK-GGFTEYPLPQPDSGPYGITEGLNGDIWFTQLN------GDRIGKLTAD-GTIYEYDL-PNKGSYPAFITL 153 (300)
T ss_dssp TEEEEECTT-SCEEEEECSSTTCCEEEEEECSTTCEEEEETT------TTEEEEECTT-SCEEEEEC-SSTTCCEEEEEE
T ss_pred CeEEEECCC-CCeEEecCCCCCCCCccceECCCCCEEEEccC------CCeEEEECCC-CCEEEccC-CCCCCCceeEEE
Confidence 447778887 66666654321111222233346778776532 4578999997 65553321 101112224445
Q ss_pred cCCCcEEEEc---CeEEEEEcCCCccccc
Q 041767 129 DSLNKVMVLT---ELAALFFSNSNHWLKF 154 (341)
Q Consensus 129 ~~~~ki~~~g---~~~evYd~~t~~W~~~ 154 (341)
+.++++++.. +.+.+||. +++...+
T Consensus 154 d~~g~l~v~~~~~~~i~~~~~-~g~~~~~ 181 (300)
T 2qc5_A 154 GSDNALWFTENQNNSIGRITN-TGKLEEY 181 (300)
T ss_dssp CTTSSEEEEETTTTEEEEECT-TCCEEEE
T ss_pred CCCCCEEEEecCCCeEEEECC-CCcEEEe
Confidence 5667888864 46889998 6666554
No 45
>3v9f_A Two-component system sensor histidine kinase/RESP regulator, hybrid (ONE-component...; beta-propeller, beta-sandwich; 3.30A {Bacteroides thetaiotaomicron}
Probab=84.03 E-value=33 Score=33.48 Aligned_cols=188 Identities=10% Similarity=0.029 Sum_probs=97.9
Q ss_pred CCEEEEecCCCCCCCCCceEEEEcCcccceecCCCCCC-CCceeEEEEEcCCCcEEEEc--CeEEEEEcCCCcccccccc
Q 041767 81 PGLIYLWGDLPDSPESNKSLIACNPLTRLYRVLPQLGS-AWSKHGSVLVDSLNKVMVLT--ELAALFFSNSNHWLKFSSN 157 (341)
Q Consensus 81 ~glv~~~g~~~~~~~~~~~~~v~nP~t~~w~~lp~~~~-~~~~~~~~~~~~~~ki~~~g--~~~evYd~~t~~W~~~~~~ 157 (341)
+|.|++... ...+.++|+.+++++.+.+... .....-.+..+.++.+++-. +.+.+||+.+++++.+..
T Consensus 373 ~g~lWigt~-------~~Gl~~~~~~~~~~~~~~~~~~~~~~~v~~i~~d~~g~lWigt~~~Gl~~~~~~~~~~~~~~~- 444 (781)
T 3v9f_A 373 QGKLWIGTD-------GGGINVFENGKRVAIYNKENRELLSNSVLCSLKDSEGNLWFGTYLGNISYYNTRLKKFQIIEL- 444 (781)
T ss_dssp TSCEEEEEB-------SSCEEEEETTEEEEECC-----CCCSBEEEEEECTTSCEEEEETTEEEEEECSSSCEEEECCS-
T ss_pred CCCEEEEeC-------CCcEEEEECCCCeEEEccCCCCCCCcceEEEEECCCCCEEEEeccCCEEEEcCCCCcEEEecc-
Confidence 466665431 2458999999988876532111 11111133455567777753 468999999998876542
Q ss_pred CCCCCCCcccccCceEEEee--cCCCcCCcceeeEeecccCCCCceeEEEccccccccccccc------CC-ccEEEEeC
Q 041767 158 LPSKPRSPILMLNSVYALCD--VGSPWRSQWKLFCCNLSSLTNSQQFWHCLERREWGDVFDIL------KR-PRLVRGVG 228 (341)
Q Consensus 158 ~p~~~r~~~~~~~~~y~~~~--~G~~~~~~~~~~~~~~~~~~~~~v~~yD~~~~~W~~~~~~~------~~-~~lv~~~~ 228 (341)
+.. ..+.++.++. .|.+| .. .. ..+..||+++++|..+.... .. ..+..-.+
T Consensus 445 -~~~------~~~~v~~i~~d~~g~lw--------ig-t~---~Gl~~~~~~~~~~~~~~~~~~~~~~~~~i~~i~~d~~ 505 (781)
T 3v9f_A 445 -EKN------ELLDVRVFYEDKNKKIW--------IG-TH---AGVFVIDLASKKVIHHYDTSNSQLLENFVRSIAQDSE 505 (781)
T ss_dssp -TTT------CCCCEEEEEECTTSEEE--------EE-ET---TEEEEEESSSSSCCEEECTTTSSCSCSCEEEEEECTT
T ss_pred -CCC------CCCeEEEEEECCCCCEE--------EE-EC---CceEEEeCCCCeEEecccCcccccccceeEEEEEcCC
Confidence 100 0112322222 12111 11 11 24788999998887654111 11 12222225
Q ss_pred CEEEEEEeeccccccccccceEEEEEEeCCCCcEEEeccCCHHHHHhhcCCCceEEEe--cCCEEEEEEcccCcE-EEEE
Q 041767 229 NRILMIGGLKSSFTLNASCSTILILRLDLDLLEWEEAGRMPVEMYRCFSESSKFKVFG--MGDKVCFSAKRVGRL-ALWE 305 (341)
Q Consensus 229 g~l~vvgg~~~~~~~~~~~~~~~vw~~d~~~~~W~~~~~mp~~~~~~~~~~~~~~~~~--~~~~i~~~~~~~~~v-~~yD 305 (341)
|+|++.. ... .++.+|+.+++++.+.. +.. + ....+..+. ..+.|++... ..+ ..||
T Consensus 506 g~lWigt-~~~-----------Gl~~~~~~~~~~~~~~~-~~~----l-~~~~i~~i~~d~~g~lWi~T~--~Glv~~~d 565 (781)
T 3v9f_A 506 GRFWIGT-FGG-----------GVGIYTPDMQLVRKFNQ-YEG----F-CSNTINQIYRSSKGQMWLATG--EGLVCFPS 565 (781)
T ss_dssp CCEEEEE-SSS-----------CEEEECTTCCEEEEECT-TTT----C-SCSCEEEEEECTTSCEEEEET--TEEEEESC
T ss_pred CCEEEEE-cCC-----------CEEEEeCCCCeEEEccC-CCC----C-CCCeeEEEEECCCCCEEEEEC--CCceEEEC
Confidence 6676533 211 15678888888887653 111 1 112233332 3567887654 456 8888
Q ss_pred eeeCCCCeeEEcC
Q 041767 306 CEKGGGGEWRWID 318 (341)
Q Consensus 306 ~~~~~~~~W~~~~ 318 (341)
+. +++++.+.
T Consensus 566 ~~---~~~~~~~~ 575 (781)
T 3v9f_A 566 AR---NFDYQVFQ 575 (781)
T ss_dssp TT---TCCCEEEC
T ss_pred CC---CCcEEEcc
Confidence 88 66666653
No 46
>1rwi_B Serine/threonine-protein kinase PKND; beta propeller, structural genomics, PSI, protein structure initiative; 1.80A {Mycobacterium tuberculosis} SCOP: b.68.9.1 PDB: 1rwl_A
Probab=83.79 E-value=16 Score=29.72 Aligned_cols=69 Identities=19% Similarity=0.168 Sum_probs=37.9
Q ss_pred eeccCCEEEE-ecCCCCCCCCCceEEEEcCcccceecCCCCCCCCceeEEEEEcCCCcEEEEc--CeEEEEEcCCCcccc
Q 041767 77 VASSPGLIYL-WGDLPDSPESNKSLIACNPLTRLYRVLPQLGSAWSKHGSVLVDSLNKVMVLT--ELAALFFSNSNHWLK 153 (341)
Q Consensus 77 ~~~~~glv~~-~g~~~~~~~~~~~~~v~nP~t~~w~~lp~~~~~~~~~~~~~~~~~~ki~~~g--~~~evYd~~t~~W~~ 153 (341)
...-+|.|++ .... ...+.++|+.+.....++..... ....+..+.++++|+.. +.+.+||+.++.-..
T Consensus 30 ~~~~~g~l~v~~~~~------~~~i~~~~~~~~~~~~~~~~~~~--~p~~i~~~~~g~l~v~~~~~~i~~~d~~~~~~~~ 101 (270)
T 1rwi_B 30 AVDSAGNVYVTSEGM------YGRVVKLATGSTGTTVLPFNGLY--QPQGLAVDGAGTVYVTDFNNRVVTLAAGSNNQTV 101 (270)
T ss_dssp EECTTCCEEEEECSS------SCEEEEECC-----EECCCCSCC--SCCCEEECTTCCEEEEETTTEEEEECTTCSCCEE
T ss_pred EECCCCCEEEEccCC------CCcEEEecCCCcccceEeeCCcC--CcceeEECCCCCEEEEcCCCEEEEEeCCCceEee
Confidence 3334677887 5332 46889999988776654422111 11233445567888874 578899987765443
No 47
>2z2n_A Virginiamycin B lyase; seven-bladed beta-propeller, antibiotic resistance, E mechanism, virginiamycin B hydrolase streptogramin; HET: MSE; 1.65A {Staphylococcus aureus} PDB: 2z2o_A 2z2p_A*
Probab=83.59 E-value=17 Score=29.90 Aligned_cols=96 Identities=9% Similarity=-0.047 Sum_probs=53.7
Q ss_pred ceEEEeeCCCCcEEEeeCCCCCCCCcceeeccCCEEEEecCCCCCCCCCceEEEEcCcccceecCCCCCCCCceeEEEEE
Q 041767 49 AALHVYDPNQNQWLRFDLSFLPFRSLHPVASSPGLIYLWGDLPDSPESNKSLIACNPLTRLYRVLPQLGSAWSKHGSVLV 128 (341)
Q Consensus 49 ~~~~~yd~~~~~W~~l~~~~~p~~~~~~~~~~~glv~~~g~~~~~~~~~~~~~v~nP~t~~w~~lp~~~~~~~~~~~~~~ 128 (341)
..+..||+. .+...+..+........+....+|.|++.... ...+.++|+ +++........ .......+..
T Consensus 78 ~~i~~~~~~-g~~~~~~~~~~~~~~~~i~~~~~g~l~v~~~~------~~~i~~~d~-~g~~~~~~~~~-~~~~~~~i~~ 148 (299)
T 2z2n_A 78 NKIGRITKK-GIIKEYTLPNPDSAPYGITEGPNGDIWFTEMN------GNRIGRITD-DGKIREYELPN-KGSYPSFITL 148 (299)
T ss_dssp TEEEEECTT-SCEEEEECSSTTCCEEEEEECTTSCEEEEETT------TTEEEEECT-TCCEEEEECSS-TTCCEEEEEE
T ss_pred CeEEEECCC-CcEEEEeCCCcCCCceeeEECCCCCEEEEecC------CceEEEECC-CCCEEEecCCC-CCCCCceEEE
Confidence 346777776 45555554311111222233346778776532 467999999 76665432211 1112224445
Q ss_pred cCCCcEEEEc---CeEEEEEcCCCccccc
Q 041767 129 DSLNKVMVLT---ELAALFFSNSNHWLKF 154 (341)
Q Consensus 129 ~~~~ki~~~g---~~~evYd~~t~~W~~~ 154 (341)
+.++++++.. +.+.+||. +++.+.+
T Consensus 149 ~~~g~l~v~~~~~~~i~~~~~-~g~~~~~ 176 (299)
T 2z2n_A 149 GSDNALWFTENQNNAIGRITE-SGDITEF 176 (299)
T ss_dssp CTTSCEEEEETTTTEEEEECT-TCCEEEE
T ss_pred cCCCCEEEEeCCCCEEEEEcC-CCcEEEe
Confidence 5667888864 47899998 7766553
No 48
>2aq5_A Coronin-1A; WD40 repeat, 7-bladed beta-propeller, structural protein; HET: CME; 1.75A {Mus musculus} PDB: 2b4e_A
Probab=82.70 E-value=24 Score=30.89 Aligned_cols=66 Identities=6% Similarity=-0.011 Sum_probs=35.3
Q ss_pred CCEEEEecCCCCCCCCCceEEEEcCcccceecCC--CC---CCCCceeEEEEEcCCC-cEEEEc---CeEEEEEcCCCcc
Q 041767 81 PGLIYLWGDLPDSPESNKSLIACNPLTRLYRVLP--QL---GSAWSKHGSVLVDSLN-KVMVLT---ELAALFFSNSNHW 151 (341)
Q Consensus 81 ~glv~~~g~~~~~~~~~~~~~v~nP~t~~w~~lp--~~---~~~~~~~~~~~~~~~~-ki~~~g---~~~evYd~~t~~W 151 (341)
+|-+++.++. ...+.+||..++....-. +. .........+...+++ ++++.+ +.+.+||..+++.
T Consensus 93 ~~~~l~s~s~------dg~v~vw~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~~~ 166 (402)
T 2aq5_A 93 NDNVIASGSE------DCTVMVWEIPDGGLVLPLREPVITLEGHTKRVGIVAWHPTAQNVLLSAGCDNVILVWDVGTGAA 166 (402)
T ss_dssp CTTEEEEEET------TSEEEEEECCTTCCSSCBCSCSEEEECCSSCEEEEEECSSBTTEEEEEETTSCEEEEETTTTEE
T ss_pred CCCEEEEEeC------CCeEEEEEccCCCCccccCCceEEecCCCCeEEEEEECcCCCCEEEEEcCCCEEEEEECCCCCc
Confidence 5555555543 578999999887543211 11 0000011122233444 566654 5799999987754
Q ss_pred c
Q 041767 152 L 152 (341)
Q Consensus 152 ~ 152 (341)
.
T Consensus 167 ~ 167 (402)
T 2aq5_A 167 V 167 (402)
T ss_dssp E
T ss_pred c
Confidence 3
No 49
>3e5z_A Putative gluconolactonase; X-RAY NESG Q9RXN3 gluconolactonase, structural genomics, PSI protein structure initiative; 2.01A {Deinococcus radiodurans}
Probab=82.37 E-value=20 Score=29.81 Aligned_cols=80 Identities=4% Similarity=-0.104 Sum_probs=45.6
Q ss_pred ceEEEeeCCCCcEEEeeCCCCCCCCcceeeccCCEEEEecCCCCCCCCCceEEEEcCcccceecCCCCCCC--CceeEEE
Q 041767 49 AALHVYDPNQNQWLRFDLSFLPFRSLHPVASSPGLIYLWGDLPDSPESNKSLIACNPLTRLYRVLPQLGSA--WSKHGSV 126 (341)
Q Consensus 49 ~~~~~yd~~~~~W~~l~~~~~p~~~~~~~~~~~glv~~~g~~~~~~~~~~~~~v~nP~t~~w~~lp~~~~~--~~~~~~~ 126 (341)
..+..||+..+ ...+..+. .....+...-+|.+++.... ...+.++|+.+++.+.+...... ......+
T Consensus 50 ~~i~~~~~~~~-~~~~~~~~--~~~~~l~~~~dg~l~v~~~~------~~~i~~~d~~~g~~~~~~~~~~~~~~~~~~~i 120 (296)
T 3e5z_A 50 NRTWAWSDDGQ-LSPEMHPS--HHQNGHCLNKQGHLIACSHG------LRRLERQREPGGEWESIADSFEGKKLNSPNDV 120 (296)
T ss_dssp TEEEEEETTSC-EEEEESSC--SSEEEEEECTTCCEEEEETT------TTEEEEECSTTCCEEEEECEETTEECCCCCCE
T ss_pred CEEEEEECCCC-eEEEECCC--CCcceeeECCCCcEEEEecC------CCeEEEEcCCCCcEEEEeeccCCCCCCCCCCE
Confidence 45778888877 55555321 11222233446777766532 46899999999988765432111 1111234
Q ss_pred EEcCCCcEEEE
Q 041767 127 LVDSLNKVMVL 137 (341)
Q Consensus 127 ~~~~~~ki~~~ 137 (341)
..++++++++.
T Consensus 121 ~~d~~G~l~vt 131 (296)
T 3e5z_A 121 CLAPDGSLWFS 131 (296)
T ss_dssp EECTTSCEEEE
T ss_pred EECCCCCEEEE
Confidence 45567788885
No 50
>3mbr_X Glutamine cyclotransferase; beta-propeller; 1.44A {Xanthomonas campestris}
Probab=82.30 E-value=8.5 Score=32.00 Aligned_cols=87 Identities=10% Similarity=-0.031 Sum_probs=50.7
Q ss_pred CceeEEEcccccccc-cc--cccCCccEEEEeCCEEEEEEeeccccccccccceEEEEEEeCCCCcEEEeccCCHHHHHh
Q 041767 199 SQQFWHCLERREWGD-VF--DILKRPRLVRGVGNRILMIGGLKSSFTLNASCSTILILRLDLDLLEWEEAGRMPVEMYRC 275 (341)
Q Consensus 199 ~~v~~yD~~~~~W~~-~~--~~~~~~~lv~~~~g~l~vvgg~~~~~~~~~~~~~~~vw~~d~~~~~W~~~~~mp~~~~~~ 275 (341)
+.|..+|+++++=.. ++ .......+.. .+++||++....+ .++++|..+ -+.+.++|.+.
T Consensus 43 S~v~~vD~~tgkv~~~~~l~~~~fgeGi~~-~~~~ly~ltw~~~-----------~v~v~D~~t--l~~~~ti~~~~--- 105 (243)
T 3mbr_X 43 SSVRKVDLETGRILQRAEVPPPYFGAGIVA-WRDRLIQLTWRNH-----------EGFVYDLAT--LTPRARFRYPG--- 105 (243)
T ss_dssp CEEEEEETTTCCEEEEEECCTTCCEEEEEE-ETTEEEEEESSSS-----------EEEEEETTT--TEEEEEEECSS---
T ss_pred ceEEEEECCCCCEEEEEeCCCCcceeEEEE-eCCEEEEEEeeCC-----------EEEEEECCc--CcEEEEEeCCC---
Confidence 368899999875322 11 1111122343 5899999875432 467888754 45555555331
Q ss_pred hcCCCceEEEecCCEEEEEEcccCcEEEEEee
Q 041767 276 FSESSKFKVFGMGDKVCFSAKRVGRLALWECE 307 (341)
Q Consensus 276 ~~~~~~~~~~~~~~~i~~~~~~~~~v~~yD~~ 307 (341)
....++..++.+|++.+ .+.+.++|+.
T Consensus 106 ----~Gwglt~dg~~L~vSdg-s~~l~~iDp~ 132 (243)
T 3mbr_X 106 ----EGWALTSDDSHLYMSDG-TAVIRKLDPD 132 (243)
T ss_dssp ----CCCEEEECSSCEEEECS-SSEEEEECTT
T ss_pred ----CceEEeeCCCEEEEECC-CCeEEEEeCC
Confidence 12344455667777654 5778888887
No 51
>1n7d_A LDL receptor, low-density lipoprotein receptor; familial hypercholesterolemia, cholestero metabolism, lipid transport; HET: NAG BMA MAN KEG; 3.70A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1 g.3.11.1 g.3.11.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 PDB: 2lgp_A 1xfe_A 1f5y_A 1ldl_A 1ldr_A 1d2j_A 1f8z_A
Probab=82.24 E-value=38 Score=32.83 Aligned_cols=64 Identities=8% Similarity=-0.003 Sum_probs=35.4
Q ss_pred ccCCEEEEecCCCCCCCCCceEEEEcCccc----ceecCCCCCCCCceeEEEEEc-CCCcEEEEc---CeEEEEEcCCCc
Q 041767 79 SSPGLIYLWGDLPDSPESNKSLIACNPLTR----LYRVLPQLGSAWSKHGSVLVD-SLNKVMVLT---ELAALFFSNSNH 150 (341)
Q Consensus 79 ~~~glv~~~g~~~~~~~~~~~~~v~nP~t~----~w~~lp~~~~~~~~~~~~~~~-~~~ki~~~g---~~~evYd~~t~~ 150 (341)
..++.||+.... ...+.++++.+. .-..+-.. .......++++ .+++||+.. +.+.++|.....
T Consensus 415 ~~~~~Ly~sD~~------~~~I~~~~~~g~~~~~~~~~~i~~--~~~~P~glavD~~~g~LY~tD~~~~~I~v~d~dg~~ 486 (699)
T 1n7d_A 415 VASNRIYWSDLS------QRMICSTQLDRAHGVSSYDTVISR--DIQAPDGLAVDWIHSNIYWTDSVLGTVSVADTKGVK 486 (699)
T ss_dssp TTTTEEEECCTT------TTSBEEEESCCCCC-CCCCCBCCS--CC--CCCEECCCSSSBCEECCTTTSCEEEEBSSSCC
T ss_pred cccCeEEEEecC------CCeEEEEecCCCCCCcceEEEEeC--CCCCcceEEEEeeCCcEEEEeccCCeEEEEecCCCc
Confidence 347888887643 467888888751 21111110 11112233444 456888873 468888877554
No 52
>3hfq_A Uncharacterized protein LP_2219; Q88V64_lacpl, NESG, LPR118, structural genomics, PSI-2, protein structure initiative; 1.96A {Lactobacillus plantarum}
Probab=81.06 E-value=25 Score=29.96 Aligned_cols=99 Identities=4% Similarity=-0.026 Sum_probs=48.2
Q ss_pred ceEEEeeCCCCcEEEeeC-CCCCCCCcceeeccC-CEEEEecCCCCCCCCCceEEEEcCc-ccceecCCCCC------CC
Q 041767 49 AALHVYDPNQNQWLRFDL-SFLPFRSLHPVASSP-GLIYLWGDLPDSPESNKSLIACNPL-TRLYRVLPQLG------SA 119 (341)
Q Consensus 49 ~~~~~yd~~~~~W~~l~~-~~~p~~~~~~~~~~~-glv~~~g~~~~~~~~~~~~~v~nP~-t~~w~~lp~~~------~~ 119 (341)
..+.+||........+.. .........+..+-+ ..|++.+.. ...+.+|+.. +++...+.... ..
T Consensus 63 ~~v~~~~~~~g~~~~~~~~~~~~~~p~~~a~spdg~~l~~~~~~------~~~v~v~~~~~~g~~~~~~~~~~~~~~p~~ 136 (347)
T 3hfq_A 63 GGIAAWQIDGQTAHKLNTVVAPGTPPAYVAVDEARQLVYSANYH------KGTAEVMKIAADGALTLTDTVQHSGHGPRP 136 (347)
T ss_dssp EEEEEEEEETTEEEEEEEEEEESCCCSEEEEETTTTEEEEEETT------TTEEEEEEECTTSCEEEEEEEECCCCCSST
T ss_pred ceEEEEEecCCcEEEeeeeecCCCCCEEEEECCCCCEEEEEeCC------CCEEEEEEeCCCCCeeecceeecCCCCCCc
Confidence 456778876666655432 100111122222334 456666532 4577888874 33333222110 00
Q ss_pred Cc---eeEEEEEcCCCcEEEEc---CeEEEEEcC-CCcccc
Q 041767 120 WS---KHGSVLVDSLNKVMVLT---ELAALFFSN-SNHWLK 153 (341)
Q Consensus 120 ~~---~~~~~~~~~~~ki~~~g---~~~evYd~~-t~~W~~ 153 (341)
+. ....+..++++++|+.. +.+.+||.. +++...
T Consensus 137 ~~~~~~~~~~~~spdg~l~v~~~~~~~v~~~~~~~~g~~~~ 177 (347)
T 3hfq_A 137 EQDGSHIHYTDLTPDNRLAVIDLGSDKVYVYNVSDAGQLSE 177 (347)
T ss_dssp TCSSCCEEEEEECTTSCEEEEETTTTEEEEEEECTTSCEEE
T ss_pred cccCCCceEEEECCCCcEEEEeCCCCEEEEEEECCCCcEEE
Confidence 10 11234455667777664 478999987 455443
No 53
>3vgz_A Uncharacterized protein YNCE; beta-propeller, protein binding; 1.70A {Escherichia coli} PDB: 3vh0_A*
Probab=78.27 E-value=30 Score=29.25 Aligned_cols=93 Identities=10% Similarity=0.080 Sum_probs=50.3
Q ss_pred ceEEEeeCCCCcEE-EeeCCCCCCCCcce-eeccCCEEEEecCCCCCCCCCceEEEEcCcccceecCCCCCCCC------
Q 041767 49 AALHVYDPNQNQWL-RFDLSFLPFRSLHP-VASSPGLIYLWGDLPDSPESNKSLIACNPLTRLYRVLPQLGSAW------ 120 (341)
Q Consensus 49 ~~~~~yd~~~~~W~-~l~~~~~p~~~~~~-~~~~~glv~~~g~~~~~~~~~~~~~v~nP~t~~w~~lp~~~~~~------ 120 (341)
..+..+|+.+.+-. .++....| ..+ +...+..+++.+.. ...+.++|+.+++-...-+.....
T Consensus 69 ~~v~~~d~~~~~~~~~~~~~~~~---~~~~~s~dg~~l~v~~~~------~~~v~~~d~~~~~~~~~~~~~~~~~~~~~~ 139 (353)
T 3vgz_A 69 GVVYRLDPVTLEVTQAIHNDLKP---FGATINNTTQTLWFGNTV------NSAVTAIDAKTGEVKGRLVLDDRKRTEEVR 139 (353)
T ss_dssp EEEEEECTTTCCEEEEEEESSCC---CSEEEETTTTEEEEEETT------TTEEEEEETTTCCEEEEEESCCCCCCSSCC
T ss_pred ccEEEEcCCCCeEEEEEecCCCc---ceEEECCCCCEEEEEecC------CCEEEEEeCCCCeeEEEEecCCCccccccC
Confidence 45778888876533 33332222 222 34445567777643 468999999988753221111100
Q ss_pred ce-eEEEEEcCCC-cEEEEc----CeEEEEEcCCCc
Q 041767 121 SK-HGSVLVDSLN-KVMVLT----ELAALFFSNSNH 150 (341)
Q Consensus 121 ~~-~~~~~~~~~~-ki~~~g----~~~evYd~~t~~ 150 (341)
.. ...+..++++ ++|+.+ +.+.+||..+.+
T Consensus 140 ~~~~~~~~~s~dg~~l~~~~~~~~~~i~~~d~~~~~ 175 (353)
T 3vgz_A 140 PLQPRELVADDATNTVYISGIGKESVIWVVDGGNIK 175 (353)
T ss_dssp CCEEEEEEEETTTTEEEEEEESSSCEEEEEETTTTE
T ss_pred CCCCceEEECCCCCEEEEEecCCCceEEEEcCCCCc
Confidence 01 1123333444 566654 358999987664
No 54
>3jro_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum, transport, membrane, mRNA transport; 4.00A {Saccharomyces cerevisiae}
Probab=77.33 E-value=53 Score=31.90 Aligned_cols=96 Identities=8% Similarity=0.037 Sum_probs=49.8
Q ss_pred ceEEEeeCCCCcEEEeeCCCCCCCCcceeec-cC--CEEEEecCCCCCCCCCceEEEEcCcccceecCCCCCCCCceeEE
Q 041767 49 AALHVYDPNQNQWLRFDLSFLPFRSLHPVAS-SP--GLIYLWGDLPDSPESNKSLIACNPLTRLYRVLPQLGSAWSKHGS 125 (341)
Q Consensus 49 ~~~~~yd~~~~~W~~l~~~~~p~~~~~~~~~-~~--glv~~~g~~~~~~~~~~~~~v~nP~t~~w~~lp~~~~~~~~~~~ 125 (341)
..+.+||.....+..+.....+......++. .+ |-+++.++. .+.+.+||..++++..+..+.........
T Consensus 31 g~I~vwd~~~~~~~~~~~l~~h~~~V~~l~~s~~~~~~~l~s~s~------Dg~I~vwd~~~~~~~~~~~~~~h~~~V~~ 104 (753)
T 3jro_A 31 KTIKIFEVEGETHKLIDTLTGHEGPVWRVDWAHPKFGTILASCSY------DGKVLIWKEENGRWSQIAVHAVHSASVNS 104 (753)
T ss_dssp TEEEEEEEETTEEEEEEEECCCSSCEEEEEECCTTSCSEEEEEET------TSCEEEEEEETTEEEEEEEECCCSSCEEE
T ss_pred CcEEEEecCCCCCccceeccCCcCceEEEEecCCCCCCEEEEEeC------CCeEEEEECCCCcccccccccCCCCCeEE
Confidence 4567777766556554311111111111332 22 544455543 56899999999876554433211111112
Q ss_pred EEEcCC--CcEEEEc---CeEEEEEcCCCc
Q 041767 126 VLVDSL--NKVMVLT---ELAALFFSNSNH 150 (341)
Q Consensus 126 ~~~~~~--~ki~~~g---~~~evYd~~t~~ 150 (341)
+...++ +++++.+ +.+.+||..++.
T Consensus 105 v~~sp~~~~~~l~sgs~dg~I~vwdl~~~~ 134 (753)
T 3jro_A 105 VQWAPHEYGPLLLVASSDGKVSVVEFKENG 134 (753)
T ss_dssp EEECCGGGCSEEEEEETTSEEEEEECCSSS
T ss_pred EEECCCCCCCEEEEEeCCCcEEEEEeecCC
Confidence 223344 6566554 579999988763
No 55
>1rwi_B Serine/threonine-protein kinase PKND; beta propeller, structural genomics, PSI, protein structure initiative; 1.80A {Mycobacterium tuberculosis} SCOP: b.68.9.1 PDB: 1rwl_A
Probab=75.82 E-value=30 Score=28.01 Aligned_cols=94 Identities=14% Similarity=0.076 Sum_probs=49.3
Q ss_pred ceEEEeeCCCCcEEEeeCCCCCCCCcceeeccCCEEEEecCCCCCCCCCceEEEEcCcccceecCCCCCCCCceeEEEEE
Q 041767 49 AALHVYDPNQNQWLRFDLSFLPFRSLHPVASSPGLIYLWGDLPDSPESNKSLIACNPLTRLYRVLPQLGSAWSKHGSVLV 128 (341)
Q Consensus 49 ~~~~~yd~~~~~W~~l~~~~~p~~~~~~~~~~~glv~~~g~~~~~~~~~~~~~v~nP~t~~w~~lp~~~~~~~~~~~~~~ 128 (341)
..+..+|+.+.....++..... ....+....+|.|++... ...+.++|+.++....++.... .....+..
T Consensus 46 ~~i~~~~~~~~~~~~~~~~~~~-~p~~i~~~~~g~l~v~~~-------~~~i~~~d~~~~~~~~~~~~~~--~~p~~i~~ 115 (270)
T 1rwi_B 46 GRVVKLATGSTGTTVLPFNGLY-QPQGLAVDGAGTVYVTDF-------NNRVVTLAAGSNNQTVLPFDGL--NYPEGLAV 115 (270)
T ss_dssp CEEEEECC-----EECCCCSCC-SCCCEEECTTCCEEEEET-------TTEEEEECTTCSCCEECCCCSC--SSEEEEEE
T ss_pred CcEEEecCCCcccceEeeCCcC-CcceeEECCCCCEEEEcC-------CCEEEEEeCCCceEeeeecCCc--CCCcceEE
Confidence 3466677766544433321111 122223334677777653 3579999998877665542211 12224445
Q ss_pred cCCCcEEEEc---CeEEEEEcCCCccc
Q 041767 129 DSLNKVMVLT---ELAALFFSNSNHWL 152 (341)
Q Consensus 129 ~~~~ki~~~g---~~~evYd~~t~~W~ 152 (341)
++++++|+.. +.+.+||..+....
T Consensus 116 ~~~g~l~v~~~~~~~i~~~~~~~~~~~ 142 (270)
T 1rwi_B 116 DTQGAVYVADRGNNRVVKLAAGSKTQT 142 (270)
T ss_dssp CTTCCEEEEEGGGTEEEEECTTCCSCE
T ss_pred CCCCCEEEEECCCCEEEEEECCCceeE
Confidence 5667888874 46888887665543
No 56
>3dwl_C Actin-related protein 2/3 complex subunit 1; propellor, actin-binding, ATP-binding, cytoskeleton, nucleot binding, WD repeat; HET: ATP; 3.78A {Schizosaccharomyces pombe}
Probab=72.43 E-value=46 Score=28.52 Aligned_cols=101 Identities=6% Similarity=-0.014 Sum_probs=41.4
Q ss_pred ceEEEeeCCCCcEEEeeCCCCCCCC-cceeeccCCEEEEecCCCCCCCCCceEEEEcCcccc-eecCCCCCCCCceeEEE
Q 041767 49 AALHVYDPNQNQWLRFDLSFLPFRS-LHPVASSPGLIYLWGDLPDSPESNKSLIACNPLTRL-YRVLPQLGSAWSKHGSV 126 (341)
Q Consensus 49 ~~~~~yd~~~~~W~~l~~~~~p~~~-~~~~~~~~glv~~~g~~~~~~~~~~~~~v~nP~t~~-w~~lp~~~~~~~~~~~~ 126 (341)
..+.+||..+..|..+..-...... ..+.-+-+|.+++.++. ...+.+||..+++ +.....+.........+
T Consensus 33 ~~i~iw~~~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~s~------d~~v~vwd~~~~~~~~~~~~~~~~~~~v~~~ 106 (377)
T 3dwl_C 33 NQVELYEQDGNGWKHARTFSDHDKIVTCVDWAPKSNRIVTCSQ------DRNAYVYEKRPDGTWKQTLVLLRLNRAATFV 106 (377)
T ss_dssp SCBCEEEEETTEEEECCCBCCCSSCEEEEEECTTTCCEEEEET------TSSEEEC------CCCCEEECCCCSSCEEEE
T ss_pred CEEEEEEccCCceEEEEEEecCCceEEEEEEeCCCCEEEEEeC------CCeEEEEEcCCCCceeeeeEecccCCceEEE
Confidence 3466777777766554311111111 12122234544444443 4679999998887 44332221111111122
Q ss_pred EEcCCCcEEEEc---CeEEEEEcCCCc-ccccc
Q 041767 127 LVDSLNKVMVLT---ELAALFFSNSNH-WLKFS 155 (341)
Q Consensus 127 ~~~~~~ki~~~g---~~~evYd~~t~~-W~~~~ 155 (341)
...++++.++.+ +.+.+||..++. |..+.
T Consensus 107 ~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~ 139 (377)
T 3dwl_C 107 RWSPNEDKFAVGSGARVISVCYFEQENDWWVSK 139 (377)
T ss_dssp ECCTTSSCCEEEESSSCEEECCC-----CCCCE
T ss_pred EECCCCCEEEEEecCCeEEEEEECCcccceeee
Confidence 233455544443 468899888765 54443
No 57
>3bws_A Protein LP49; two-domain, immunoglobulin-like, 7-bladed beta propeller, unknown function; 1.99A {Leptospira interrogans}
Probab=71.44 E-value=52 Score=28.80 Aligned_cols=92 Identities=14% Similarity=0.103 Sum_probs=46.6
Q ss_pred ceEEEeeCCCCcEE-EeeCCCCCCCCcce-eeccCCEEEEecCCCCCCCCCceEEEEcCcccceecCCCCCCCCceeEEE
Q 041767 49 AALHVYDPNQNQWL-RFDLSFLPFRSLHP-VASSPGLIYLWGDLPDSPESNKSLIACNPLTRLYRVLPQLGSAWSKHGSV 126 (341)
Q Consensus 49 ~~~~~yd~~~~~W~-~l~~~~~p~~~~~~-~~~~~glv~~~g~~~~~~~~~~~~~v~nP~t~~w~~lp~~~~~~~~~~~~ 126 (341)
..+.++|..+.+.. .+.... .....+ +...+..+++.+.. ...+.+||+.+++....-+... ....+
T Consensus 191 ~~v~~~d~~~~~~~~~~~~~~--~~~~~~~~~~~~~~l~~~~~~------~~~i~~~d~~~~~~~~~~~~~~---~~~~~ 259 (433)
T 3bws_A 191 NAVHVFDLKTLAYKATVDLTG--KWSKILLYDPIRDLVYCSNWI------SEDISVIDRKTKLEIRKTDKIG---LPRGL 259 (433)
T ss_dssp TEEEEEETTTCCEEEEEECSS--SSEEEEEEETTTTEEEEEETT------TTEEEEEETTTTEEEEECCCCS---EEEEE
T ss_pred CEEEEEECCCceEEEEEcCCC--CCeeEEEEcCCCCEEEEEecC------CCcEEEEECCCCcEEEEecCCC---CceEE
Confidence 34667777664432 232111 011111 23335567666543 4689999998877644322211 12233
Q ss_pred EEcCCCc-EEEEc----------CeEEEEEcCCCcc
Q 041767 127 LVDSLNK-VMVLT----------ELAALFFSNSNHW 151 (341)
Q Consensus 127 ~~~~~~k-i~~~g----------~~~evYd~~t~~W 151 (341)
..+++++ +++.+ +.+.+||..+++-
T Consensus 260 ~~~~~g~~l~~~~~~~~~~~~~dg~i~~~d~~~~~~ 295 (433)
T 3bws_A 260 LLSKDGKELYIAQFSASNQESGGGRLGIYSMDKEKL 295 (433)
T ss_dssp EECTTSSEEEEEEEESCTTCSCCEEEEEEETTTTEE
T ss_pred EEcCCCCEEEEEECCCCccccCCCeEEEEECCCCcE
Confidence 3445554 44433 1577999887643
No 58
>2ojh_A Uncharacterized protein ATU1656/AGR_C_3050; TOLB, 6-stranded beta-propeller, structural genomics, PSI-2; 1.85A {Agrobacterium tumefaciens str}
Probab=71.38 E-value=39 Score=27.31 Aligned_cols=59 Identities=10% Similarity=0.003 Sum_probs=33.5
Q ss_pred CceEEEeeCCCCcEEEeeCCCCCCCCcceeeccCCEEEEecCCCCCCCCCceEEEEcCcc-cceecCCC
Q 041767 48 AAALHVYDPNQNQWLRFDLSFLPFRSLHPVASSPGLIYLWGDLPDSPESNKSLIACNPLT-RLYRVLPQ 115 (341)
Q Consensus 48 ~~~~~~yd~~~~~W~~l~~~~~p~~~~~~~~~~~glv~~~g~~~~~~~~~~~~~v~nP~t-~~w~~lp~ 115 (341)
...+.++|..+.+...+... +.....+.-+-+|..++.+. ...++++|..+ ++...+..
T Consensus 21 ~~~i~~~d~~~~~~~~~~~~--~~~v~~~~~spdg~~l~~~~-------~~~i~~~d~~~~~~~~~~~~ 80 (297)
T 2ojh_A 21 RSSIEIFNIRTRKMRVVWQT--PELFEAPNWSPDGKYLLLNS-------EGLLYRLSLAGDPSPEKVDT 80 (297)
T ss_dssp CEEEEEEETTTTEEEEEEEE--SSCCEEEEECTTSSEEEEEE-------TTEEEEEESSSCCSCEECCC
T ss_pred ceeEEEEeCCCCceeeeccC--CcceEeeEECCCCCEEEEEc-------CCeEEEEeCCCCCCceEecc
Confidence 35577888888776654421 11112222333554444432 35899999998 77766543
No 59
>3dwl_C Actin-related protein 2/3 complex subunit 1; propellor, actin-binding, ATP-binding, cytoskeleton, nucleot binding, WD repeat; HET: ATP; 3.78A {Schizosaccharomyces pombe}
Probab=71.34 E-value=48 Score=28.35 Aligned_cols=69 Identities=6% Similarity=-0.041 Sum_probs=35.7
Q ss_pred CCEEEEecCCCCCCCCCceEEEEcCcccceecCCCCCCCCceeEEEEEcCCCcEEEEc---CeEEEEEcCCCc-ccccc
Q 041767 81 PGLIYLWGDLPDSPESNKSLIACNPLTRLYRVLPQLGSAWSKHGSVLVDSLNKVMVLT---ELAALFFSNSNH-WLKFS 155 (341)
Q Consensus 81 ~glv~~~g~~~~~~~~~~~~~v~nP~t~~w~~lp~~~~~~~~~~~~~~~~~~ki~~~g---~~~evYd~~t~~-W~~~~ 155 (341)
+|-+++.++. .+.+.+||..++.|+.+..+.........+...++++.++.+ +.+.+||..++. |....
T Consensus 22 ~g~~l~~~~~------d~~i~iw~~~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~s~d~~v~vwd~~~~~~~~~~~ 94 (377)
T 3dwl_C 22 QRTEFVTTTA------TNQVELYEQDGNGWKHARTFSDHDKIVTCVDWAPKSNRIVTCSQDRNAYVYEKRPDGTWKQTL 94 (377)
T ss_dssp SSSEEECCCS------SSCBCEEEEETTEEEECCCBCCCSSCEEEEEECTTTCCEEEEETTSSEEEC------CCCCEE
T ss_pred CCCEEEEecC------CCEEEEEEccCCceEEEEEEecCCceEEEEEEeCCCCEEEEEeCCCeEEEEEcCCCCceeeee
Confidence 5555555543 567889999998777666553211111122333455544443 579999998877 65544
No 60
>3g4e_A Regucalcin; six bladed beta-propeller, gluconolcatonase, organophosphate hydrolase, calcium bound, alternative splicing, cytoplasm, phosphoprotein; 1.42A {Homo sapiens} PDB: 3g4h_B
Probab=70.68 E-value=46 Score=27.79 Aligned_cols=78 Identities=13% Similarity=-0.008 Sum_probs=45.3
Q ss_pred ceEEEeeCCCCcEEEeeCCCCCCCCcceeeccCCEEEEecCCCCCCCCCceEEEEcCcccceecCCCCCC--CCceeEEE
Q 041767 49 AALHVYDPNQNQWLRFDLSFLPFRSLHPVASSPGLIYLWGDLPDSPESNKSLIACNPLTRLYRVLPQLGS--AWSKHGSV 126 (341)
Q Consensus 49 ~~~~~yd~~~~~W~~l~~~~~p~~~~~~~~~~~glv~~~g~~~~~~~~~~~~~v~nP~t~~w~~lp~~~~--~~~~~~~~ 126 (341)
..+..||+.++.-..+..+..+ ..+.-.-+|-+++.. ...+.++|+.+++.+.+..... +......+
T Consensus 35 ~~i~~~d~~~~~~~~~~~~~~~---~~i~~~~dG~l~v~~--------~~~l~~~d~~~g~~~~~~~~~~~~~~~~~~di 103 (297)
T 3g4e_A 35 KKVCRWDSFTKQVQRVTMDAPV---SSVALRQSGGYVATI--------GTKFCALNWKEQSAVVLATVDNDKKNNRFNDG 103 (297)
T ss_dssp TEEEEEETTTCCEEEEECSSCE---EEEEEBTTSSEEEEE--------TTEEEEEETTTTEEEEEEECCTTCSSEEEEEE
T ss_pred CEEEEEECCCCcEEEEeCCCce---EEEEECCCCCEEEEE--------CCeEEEEECCCCcEEEEEecCCCCCCCCCCCE
Confidence 4578889988766555543222 222233355555443 3579999999998877654321 11222344
Q ss_pred EEcCCCcEEEE
Q 041767 127 LVDSLNKVMVL 137 (341)
Q Consensus 127 ~~~~~~ki~~~ 137 (341)
.+++++++++.
T Consensus 104 ~~d~dG~l~~~ 114 (297)
T 3g4e_A 104 KVDPAGRYFAG 114 (297)
T ss_dssp EECTTSCEEEE
T ss_pred EECCCCCEEEe
Confidence 56667888874
No 61
>1q7f_A NHL, brain tumor CG10719-PA; BRAT, NHL domain, NHL repeat, beta-propeller, translation; 1.95A {Drosophila melanogaster} SCOP: b.68.9.1
Probab=70.26 E-value=44 Score=27.42 Aligned_cols=94 Identities=10% Similarity=0.099 Sum_probs=50.8
Q ss_pred ceEEEeeCCCCcEEEeeCCCCCCCCcceeeccCCEEEEecCCCCCCCCCceEEEEcCcccceecCCCCCCCCceeEEEEE
Q 041767 49 AALHVYDPNQNQWLRFDLSFLPFRSLHPVASSPGLIYLWGDLPDSPESNKSLIACNPLTRLYRVLPQLGSAWSKHGSVLV 128 (341)
Q Consensus 49 ~~~~~yd~~~~~W~~l~~~~~p~~~~~~~~~~~glv~~~g~~~~~~~~~~~~~v~nP~t~~w~~lp~~~~~~~~~~~~~~ 128 (341)
..+..||+....-..+...... ....+....+|.+++.... ...+.+||+..+....+.... .......+..
T Consensus 100 ~~i~~~d~~g~~~~~~~~~~~~-~~~~i~~~~~g~l~v~~~~------~~~i~~~~~~g~~~~~~~~~~-~~~~p~~i~~ 171 (286)
T 1q7f_A 100 HQIQIYNQYGQFVRKFGATILQ-HPRGVTVDNKGRIIVVECK------VMRVIIFDQNGNVLHKFGCSK-HLEFPNGVVV 171 (286)
T ss_dssp CEEEEECTTSCEEEEECTTTCS-CEEEEEECTTSCEEEEETT------TTEEEEECTTSCEEEEEECTT-TCSSEEEEEE
T ss_pred CEEEEECCCCcEEEEecCccCC-CceEEEEeCCCCEEEEECC------CCEEEEEcCCCCEEEEeCCCC-ccCCcEEEEE
Confidence 3466677554433334322111 1122233346777777543 468999998765554443211 0111224455
Q ss_pred cCCCcEEEEc---CeEEEEEcCCCc
Q 041767 129 DSLNKVMVLT---ELAALFFSNSNH 150 (341)
Q Consensus 129 ~~~~ki~~~g---~~~evYd~~t~~ 150 (341)
++++++|+.. +.+.+||.....
T Consensus 172 ~~~g~l~v~~~~~~~i~~~~~~g~~ 196 (286)
T 1q7f_A 172 NDKQEIFISDNRAHCVKVFNYEGQY 196 (286)
T ss_dssp CSSSEEEEEEGGGTEEEEEETTCCE
T ss_pred CCCCCEEEEECCCCEEEEEcCCCCE
Confidence 6667888874 479999986543
No 62
>4a2l_A BT_4663, two-component system sensor histidine kinase/RESP; transcription, beta-propeller; HET: PGE PG4 MES 2PE; 2.60A {Bacteroides thetaiotaomicron} PDB: 4a2m_A*
Probab=67.36 E-value=96 Score=30.23 Aligned_cols=189 Identities=14% Similarity=0.166 Sum_probs=97.5
Q ss_pred CCEEEEecCCCCCCCCCceEEEEcCcccceecCCCCC-CC----Ccee-EEEEEcCCCc-EEEEc--CeEEEEEcCCCcc
Q 041767 81 PGLIYLWGDLPDSPESNKSLIACNPLTRLYRVLPQLG-SA----WSKH-GSVLVDSLNK-VMVLT--ELAALFFSNSNHW 151 (341)
Q Consensus 81 ~glv~~~g~~~~~~~~~~~~~v~nP~t~~w~~lp~~~-~~----~~~~-~~~~~~~~~k-i~~~g--~~~evYd~~t~~W 151 (341)
+|-|.+... ...+..+|+.+++++...... .+ .... ..+..+.+++ +++-. +.+.+||..++++
T Consensus 367 ~g~lWiGt~-------~~Gl~~~~~~~~~~~~~~~~~~~~~~~l~~~~v~~i~~d~~g~~lWigt~~~Gl~~~d~~~~~~ 439 (795)
T 4a2l_A 367 DKNLWIGTN-------DGGLNLYNPITQRFTSYTLQEDESARGIGSNNIKAVYVDEKKSLVYIGTHAGGLSILHRNSGQV 439 (795)
T ss_dssp TSCEEEEES-------SSCEEEECTTTCCEEEECCC------CCSCSCEEEEEEETTTTEEEEEETTTEEEEEETTTCCE
T ss_pred CCCEEEEEC-------CCCeEEEcCCCCcEEEEecCCCCcccCCCCccEEEEEEcCCCCEEEEEeCcCceeEEeCCCCcE
Confidence 566665431 246899999999987765321 00 0111 1334455678 66643 5789999999887
Q ss_pred ccccccCCCCCCCcccccCceEEEee--cCCCcCCcceeeEeecccCCCCceeEEEcccccccccccc-----cCC---c
Q 041767 152 LKFSSNLPSKPRSPILMLNSVYALCD--VGSPWRSQWKLFCCNLSSLTNSQQFWHCLERREWGDVFDI-----LKR---P 221 (341)
Q Consensus 152 ~~~~~~~p~~~r~~~~~~~~~y~~~~--~G~~~~~~~~~~~~~~~~~~~~~v~~yD~~~~~W~~~~~~-----~~~---~ 221 (341)
+.....-+ . ...+.++.++. .|.+| .+ .. ..+..||+++++|..+... +.. .
T Consensus 440 ~~~~~~~~---~---l~~~~v~~i~~d~~g~lw-------ig--t~---~Gl~~~~~~~~~~~~~~~~~~~~~~~~~~i~ 501 (795)
T 4a2l_A 440 ENFNQRNS---Q---LVNENVYAILPDGEGNLW-------LG--TL---SALVRFNPEQRSFTTIEKEKDGTPVVSKQIT 501 (795)
T ss_dssp EEECTTTS---C---CSCSCEEEEEECSSSCEE-------EE--ES---SCEEEEETTTTEEEECCBCTTCCBCCCCCEE
T ss_pred EEeecCCC---C---cCCCeeEEEEECCCCCEE-------EE--ec---CceeEEeCCCCeEEEccccccccccCCceEE
Confidence 76542101 0 11122333322 13221 11 11 2478899999888765421 111 1
Q ss_pred cEEEEeCCEEEEEEeeccccccccccceEEEEEEeCCCCcEEEeccC--CHHHHHhhcCCCceEEEe--cCCEEEEEEcc
Q 041767 222 RLVRGVGNRILMIGGLKSSFTLNASCSTILILRLDLDLLEWEEAGRM--PVEMYRCFSESSKFKVFG--MGDKVCFSAKR 297 (341)
Q Consensus 222 ~lv~~~~g~l~vvgg~~~~~~~~~~~~~~~vw~~d~~~~~W~~~~~m--p~~~~~~~~~~~~~~~~~--~~~~i~~~~~~ 297 (341)
.+..-.+|+|++... . .++.+|+.++.+ .+... ...+. ...+.++. ..+.|++...
T Consensus 502 ~i~~d~~g~lWigt~--~-----------Gl~~~~~~~~~~-~~~~~~~~~~l~-----~~~i~~i~~d~~g~lWigT~- 561 (795)
T 4a2l_A 502 TLFRDSHKRLWIGGE--E-----------GLSVFKQEGLDI-QKASILPVSNVT-----KLFTNCIYEASNGIIWVGTR- 561 (795)
T ss_dssp EEEECTTCCEEEEES--S-----------CEEEEEEETTEE-EECCCSCSCGGG-----GSCEEEEEECTTSCEEEEES-
T ss_pred EEEECCCCCEEEEeC--C-----------ceEEEeCCCCeE-EEecCCCCCCCC-----CCeeEEEEECCCCCEEEEeC-
Confidence 222223567776432 2 145566666666 44311 11110 11223332 3567887654
Q ss_pred cCcEEEEEeeeCCCCeeEEcC
Q 041767 298 VGRLALWECEKGGGGEWRWID 318 (341)
Q Consensus 298 ~~~v~~yD~~~~~~~~W~~~~ 318 (341)
..+..||+. +++++.+.
T Consensus 562 -~Gl~~~d~~---~~~~~~~~ 578 (795)
T 4a2l_A 562 -EGFYCFNEK---DKQIKRYN 578 (795)
T ss_dssp -SCEEEEETT---TTEEEEEC
T ss_pred -CCceeECCC---CCcEEEeC
Confidence 378999998 77777654
No 63
>3nol_A Glutamine cyclotransferase; beta-propeller, glutaminyl cyclase, pyrogl transferase; 1.70A {Zymomonas mobilis} PDB: 3nom_A
Probab=66.35 E-value=27 Score=29.28 Aligned_cols=69 Identities=13% Similarity=0.066 Sum_probs=42.1
Q ss_pred EEEeCCEEEEEEeeccccccccccceEEEEEEeCCCCcEEEeccCCHHHHHhhcCCCceEEEecCCEEEEEEcccCcEEE
Q 041767 224 VRGVGNRILMIGGLKSSFTLNASCSTILILRLDLDLLEWEEAGRMPVEMYRCFSESSKFKVFGMGDKVCFSAKRVGRLAL 303 (341)
Q Consensus 224 v~~~~g~l~vvgg~~~~~~~~~~~~~~~vw~~d~~~~~W~~~~~mp~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~v~~ 303 (341)
+++.++.||+..|..+. + .|-++|.++.+=...-.++...+. -.+.-.+++||+.....+.+.+
T Consensus 48 L~~~~~~LyestG~~g~-------S--~v~~vD~~Tgkv~~~~~l~~~~Fg-------eGit~~g~~ly~ltw~~~~v~v 111 (262)
T 3nol_A 48 FFYRNGYFYESTGLNGR-------S--SIRKVDIESGKTLQQIELGKRYFG-------EGISDWKDKIVGLTWKNGLGFV 111 (262)
T ss_dssp EEEETTEEEEEEEETTE-------E--EEEEECTTTCCEEEEEECCTTCCE-------EEEEEETTEEEEEESSSSEEEE
T ss_pred EEEECCEEEEECCCCCC-------c--eEEEEECCCCcEEEEEecCCccce-------eEEEEeCCEEEEEEeeCCEEEE
Confidence 33458899998886542 1 244677776655444445432111 1123346899987765678999
Q ss_pred EEeee
Q 041767 304 WECEK 308 (341)
Q Consensus 304 yD~~~ 308 (341)
||+.+
T Consensus 112 ~D~~t 116 (262)
T 3nol_A 112 WNIRN 116 (262)
T ss_dssp EETTT
T ss_pred EECcc
Confidence 99983
No 64
>3m0c_C LDL receptor, low-density lipoprotein receptor; protein complex, beta propeller, cholesterol clearance, PCSK autocatalytic cleavage; 7.01A {Homo sapiens}
Probab=65.78 E-value=1.1e+02 Score=30.22 Aligned_cols=181 Identities=12% Similarity=0.048 Sum_probs=86.4
Q ss_pred cCCEEEEecCCCCCCCCCceEEEEcCccc----ceecCCCCCCCCceeEEEEEc-CCCcEEEEc---CeEEEEEcCCCcc
Q 041767 80 SPGLIYLWGDLPDSPESNKSLIACNPLTR----LYRVLPQLGSAWSKHGSVLVD-SLNKVMVLT---ELAALFFSNSNHW 151 (341)
Q Consensus 80 ~~glv~~~g~~~~~~~~~~~~~v~nP~t~----~w~~lp~~~~~~~~~~~~~~~-~~~ki~~~g---~~~evYd~~t~~W 151 (341)
.++.||+.... ...++++++... ....+.... ......+++| .+++||+.. +.+++++.....-
T Consensus 434 ~~~~lY~sD~~------~~~I~~~~l~g~~~~~~~~~vi~~~--l~~P~GLAvD~~~~~LY~tD~~~~~I~v~~ldG~~~ 505 (791)
T 3m0c_C 434 ASNRIYWSDLS------QRMICSTQLDRAHGVSSYDTVISRD--IQAPDGLAVDWIHSNIYWTDSVLGTVSVADTKGVKR 505 (791)
T ss_dssp TTTEEEEEETT------TTEEEEEEC--------CEEEECSS--CSCCCEEEEETTTTEEEEEETTTTEEEEEETTSSSE
T ss_pred cCCeeEEeecc------ceeEEEEeccCCCCCcceeEEEecC--CCCcceeeeeecCCcEEEEecCCCeEEEEeCCCCeE
Confidence 46888887643 467777777642 222221111 1112234454 456899874 5789998875554
Q ss_pred ccccc-cCCCCCCCccc--ccCceEEEeecCCCcCCcceeeEeecccCCCCceeEEEcccccccccc-cccCCccEEEEe
Q 041767 152 LKFSS-NLPSKPRSPIL--MLNSVYALCDVGSPWRSQWKLFCCNLSSLTNSQQFWHCLERREWGDVF-DILKRPRLVRGV 227 (341)
Q Consensus 152 ~~~~~-~~p~~~r~~~~--~~~~~y~~~~~G~~~~~~~~~~~~~~~~~~~~~v~~yD~~~~~W~~~~-~~~~~~~lv~~~ 227 (341)
+.+.. .+. .++.-++ ..+.+|+. +-| ....|..+++....=+.+. ..+..|.-+++.
T Consensus 506 ~~l~~~~l~-~P~gIaVDp~~g~LYwt-D~g-----------------~~~~I~~~~~dG~~~~~lv~~~l~~P~GLavD 566 (791)
T 3m0c_C 506 KTLFRENGS-KPRAIVVDPVHGFMYWT-DWG-----------------TPAKIKKGGLNGVDIYSLVTENIQWPNGITLD 566 (791)
T ss_dssp EEEEECTTC-CEEEEEEETTTTEEEEE-ECS-----------------SSCEEEEEETTSCCEEEEECSSCSCEEEEEEE
T ss_pred EEEEeCCCC-CcceEEEecCCCCEEEe-cCC-----------------CCCeEEEEecCCCceEEEEeCCCCCceEEEEe
Confidence 44321 111 1111011 01223321 101 0124777777643222221 233445544433
Q ss_pred --CCEEEEEEeeccccccccccceEEEEEEeCCC-CcEEEecc---CCHHHHHhhcCCCceEEEecCCEEEEEEcccCcE
Q 041767 228 --GNRILMIGGLKSSFTLNASCSTILILRLDLDL-LEWEEAGR---MPVEMYRCFSESSKFKVFGMGDKVCFSAKRVGRL 301 (341)
Q Consensus 228 --~g~l~vvgg~~~~~~~~~~~~~~~vw~~d~~~-~~W~~~~~---mp~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~v 301 (341)
+++||++.... . .|++++..+ ...+.+.. ++. .+.+...++.||+.......|
T Consensus 567 ~~~~~LYwaD~~~---------~--~I~~~d~dG~~~~~v~~~~~~l~~----------P~glav~~~~lYwtD~~~~~I 625 (791)
T 3m0c_C 567 LLSGRLYWVDSKL---------H--SISSIDVNGGNRKTILEDEKRLAH----------PFSLAVFEDKVFWTDIINEAI 625 (791)
T ss_dssp TTTTEEEEEETTT---------T--EEEEEETTSCSCEEEEECTTTTSS----------EEEEEEETTEEEEEETTTTEE
T ss_pred cCCCeEEEEeCCC---------C--cEEEEecCCCceEEEecCCCccCC----------CCEEEEeCCEEEEEECCCCEE
Confidence 78999986321 1 356666543 33333321 221 123333467888877666778
Q ss_pred EEEEeee
Q 041767 302 ALWECEK 308 (341)
Q Consensus 302 ~~yD~~~ 308 (341)
...|..+
T Consensus 626 ~~~dk~t 632 (791)
T 3m0c_C 626 FSANRLT 632 (791)
T ss_dssp EEEETTT
T ss_pred EEEeCCC
Confidence 8888653
No 65
>1q7f_A NHL, brain tumor CG10719-PA; BRAT, NHL domain, NHL repeat, beta-propeller, translation; 1.95A {Drosophila melanogaster} SCOP: b.68.9.1
Probab=64.94 E-value=56 Score=26.71 Aligned_cols=65 Identities=11% Similarity=0.076 Sum_probs=37.2
Q ss_pred ccCCEEEEecCCCCCCCCCceEEEEcCcccceecCCCCCC---CCceeEEEEE-cCCCcEEEEc----CeEEEEEcCCC
Q 041767 79 SSPGLIYLWGDLPDSPESNKSLIACNPLTRLYRVLPQLGS---AWSKHGSVLV-DSLNKVMVLT----ELAALFFSNSN 149 (341)
Q Consensus 79 ~~~glv~~~g~~~~~~~~~~~~~v~nP~t~~w~~lp~~~~---~~~~~~~~~~-~~~~ki~~~g----~~~evYd~~t~ 149 (341)
..+|.+++.+.. ...+.+||+..+..+.++.... .......+.. +.++++|+.. +.+.+||....
T Consensus 38 ~~~g~l~v~~~~------~~~i~~~d~~g~~~~~~~~~~~~~~~~~~p~~i~~~~~~g~l~v~~~~~~~~i~~~d~~g~ 110 (286)
T 1q7f_A 38 NAQNDIIVADTN------NHRIQIFDKEGRFKFQFGECGKRDSQLLYPNRVAVVRNSGDIIVTERSPTHQIQIYNQYGQ 110 (286)
T ss_dssp CTTCCEEEEEGG------GTEEEEECTTSCEEEEECCBSSSTTCBSSEEEEEEETTTTEEEEEECGGGCEEEEECTTSC
T ss_pred CCCCCEEEEECC------CCEEEEECCCCcEEEEecccCCCcccccCceEEEEEcCCCeEEEEcCCCCCEEEEECCCCc
Confidence 346777777543 4678999988665555443211 1111223333 4567888875 36888985433
No 66
>1pjx_A Dfpase, DIISOPROPYLFLUOROPHOSPHATASE; phosphotriesterase (PTE), nitrogen-calcium coordination, BET propeller; HET: ME2 MES PGE; 0.85A {Loligo vulgaris} SCOP: b.68.6.1 PDB: 1e1a_A* 2gvv_A* 2gvw_A 3byc_A 3kgg_A 3o4p_A* 3li3_A 2gvx_A 2gvu_A 3li4_A 2iaq_A 3li5_A* 2iao_A 2iap_A 2iau_A 2iax_A 2iaw_A 2ias_A 2iat_A 2iar_A ...
Probab=64.44 E-value=60 Score=26.83 Aligned_cols=57 Identities=9% Similarity=-0.004 Sum_probs=35.4
Q ss_pred CceEEEEcCcccceecCCCC--CCCCceeEEEEEcCC-CcEEEEc--CeEEEEEcCCCccccc
Q 041767 97 NKSLIACNPLTRLYRVLPQL--GSAWSKHGSVLVDSL-NKVMVLT--ELAALFFSNSNHWLKF 154 (341)
Q Consensus 97 ~~~~~v~nP~t~~w~~lp~~--~~~~~~~~~~~~~~~-~ki~~~g--~~~evYd~~t~~W~~~ 154 (341)
...+.++|+.+++++.+... .........+..+.+ +++++.. ..+.+||.. ++.+.+
T Consensus 45 ~~~i~~~d~~~g~~~~~~~~~~~~~~~~~~~i~~~~~~g~l~v~~~~~~l~~~d~~-g~~~~~ 106 (314)
T 1pjx_A 45 AGEILRIDLKTGKKTVICKPEVNGYGGIPAGCQCDRDANQLFVADMRLGLLVVQTD-GTFEEI 106 (314)
T ss_dssp CCEEEEECTTTCCEEEEECCEETTEECCEEEEEECSSSSEEEEEETTTEEEEEETT-SCEEEC
T ss_pred CCEEEEEeCCCCcEEEEEecccCCCCCCCceEEEecCCCcEEEEECCCCEEEEeCC-CCEEEE
Confidence 45799999999888765321 000011223445556 7888874 478899988 766544
No 67
>2fp8_A Strictosidine synthase; six bladed beta propeller fold, lyase; 2.30A {Rauvolfia serpentina} PDB: 2fp9_A* 2fpc_A* 2vaq_A* 3v1s_A* 2fpb_A* 2v91_A*
Probab=64.32 E-value=65 Score=27.17 Aligned_cols=227 Identities=10% Similarity=-0.009 Sum_probs=106.9
Q ss_pred ceEEEeeCCCCcEEEeeCCCC--C----------------CCCcceeec-cCCEEEEecCCCCCCCCCceEEEEcCcccc
Q 041767 49 AALHVYDPNQNQWLRFDLSFL--P----------------FRSLHPVAS-SPGLIYLWGDLPDSPESNKSLIACNPLTRL 109 (341)
Q Consensus 49 ~~~~~yd~~~~~W~~l~~~~~--p----------------~~~~~~~~~-~~glv~~~g~~~~~~~~~~~~~v~nP~t~~ 109 (341)
..+..||+..+....+..+.. . .....+... .+|.|++... ...+.++|+.+++
T Consensus 40 ~~i~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~p~gi~~~~~~g~l~v~d~-------~~~i~~~d~~~g~ 112 (322)
T 2fp8_A 40 GRVIKYEGPNSGFVDFAYASPYWNKAFCENSTDAEKRPLCGRTYDISYNLQNNQLYIVDC-------YYHLSVVGSEGGH 112 (322)
T ss_dssp SEEEEECCTTTCEEEEEESCTTCCHHHHTTCCCGGGHHHHCCEEEEEEETTTTEEEEEET-------TTEEEEECTTCEE
T ss_pred CeEEEECCCCCceEEEecccccccccccccccchhccccCCCCceEEEcCCCCcEEEEEC-------CCCEEEEeCCCCE
Confidence 457778888777766542110 0 011222222 2688887753 2358899999887
Q ss_pred eecCCCCCC--CCceeEEEEEcC-CCcEEEEc--------------------CeEEEEEcCCCccccccccCCCCCCCcc
Q 041767 110 YRVLPQLGS--AWSKHGSVLVDS-LNKVMVLT--------------------ELAALFFSNSNHWLKFSSNLPSKPRSPI 166 (341)
Q Consensus 110 w~~lp~~~~--~~~~~~~~~~~~-~~ki~~~g--------------------~~~evYd~~t~~W~~~~~~~p~~~r~~~ 166 (341)
.+.+..... .......+.+++ ++++|+.. +.+.+||+.+++.+.+...+. .+.
T Consensus 113 ~~~~~~~~~~~~~~~p~~i~~d~~~G~l~v~d~~~~~~~~~~~~~~~~~~~~g~v~~~d~~~~~~~~~~~~~~-~p~--- 188 (322)
T 2fp8_A 113 ATQLATSVDGVPFKWLYAVTVDQRTGIVYFTDVSTLYDDRGVQQIMDTSDKTGRLIKYDPSTKETTLLLKELH-VPG--- 188 (322)
T ss_dssp CEEEESEETTEECSCEEEEEECTTTCCEEEEESCSSCCTTCHHHHHHHTCCCEEEEEEETTTTEEEEEEEEES-CCC---
T ss_pred EEEecccCCCCcccccceEEEecCCCEEEEECCcccccccccceehcccCCCceEEEEeCCCCEEEEeccCCc-cCc---
Confidence 665543211 111223455666 78999852 347888887776544321111 111
Q ss_pred cccCceEEEeecCCCcCCcceeeEeecccCCCCceeEEEccccc---ccccccccCCccEEEE-eCCEEEEEEeeccccc
Q 041767 167 LMLNSVYALCDVGSPWRSQWKLFCCNLSSLTNSQQFWHCLERRE---WGDVFDILKRPRLVRG-VGNRILMIGGLKSSFT 242 (341)
Q Consensus 167 ~~~~~~y~~~~~G~~~~~~~~~~~~~~~~~~~~~v~~yD~~~~~---W~~~~~~~~~~~lv~~-~~g~l~vvgg~~~~~~ 242 (341)
.+. +...|. .+|..... .+.|..||+..+. .+.+.. ...+.-+.. .+|+||+........
T Consensus 189 ----gia-~~~dg~-------~lyv~d~~--~~~I~~~~~~~~~~~~~~~~~~-~~gP~gi~~d~~G~l~va~~~~~~~- 252 (322)
T 2fp8_A 189 ----GAE-VSADSS-------FVLVAEFL--SHQIVKYWLEGPKKGTAEVLVK-IPNPGNIKRNADGHFWVSSSEELDG- 252 (322)
T ss_dssp ----EEE-ECTTSS-------EEEEEEGG--GTEEEEEESSSTTTTCEEEEEE-CSSEEEEEECTTSCEEEEEEEETTS-
T ss_pred ----ceE-ECCCCC-------EEEEEeCC--CCeEEEEECCCCcCCccceEEe-CCCCCCeEECCCCCEEEEecCcccc-
Confidence 111 111111 11211111 1257788877532 222111 111322222 257888876431000
Q ss_pred cccccceEEEEEEeCCCCcEEEeccCCHHHHHhhcCCCceEEEecCCEEEEEEcccCcEEEEEee
Q 041767 243 LNASCSTILILRLDLDLLEWEEAGRMPVEMYRCFSESSKFKVFGMGDKVCFSAKRVGRLALWECE 307 (341)
Q Consensus 243 ~~~~~~~~~vw~~d~~~~~W~~~~~mp~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~v~~yD~~ 307 (341)
.......-.|+++|++...-..+ ..|.... ..... .+...++.+||.....+.|.+||+.
T Consensus 253 ~~~~~~~~~v~~~d~~G~~~~~~-~~~~g~~---~~~~~-~~~~~~g~L~v~~~~~~~i~~~~~~ 312 (322)
T 2fp8_A 253 NMHGRVDPKGIKFDEFGNILEVI-PLPPPFA---GEHFE-QIQEHDGLLYIGTLFHGSVGILVYD 312 (322)
T ss_dssp STTSCEEEEEEEECTTSCEEEEE-ECCTTTT---TSCCC-EEEEETTEEEEECSSCSEEEEEEC-
T ss_pred cccCCCccEEEEECCCCCEEEEE-ECCCCCc---cccce-EEEEeCCEEEEeecCCCceEEEecc
Confidence 00000123577888864433333 3332210 11111 2233468899987656789999988
No 68
>1p22_A F-BOX/WD-repeat protein 1A; ubiquitination, degradation, signaling protein; HET: SEP; 2.95A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1
Probab=62.24 E-value=83 Score=27.73 Aligned_cols=61 Identities=8% Similarity=-0.025 Sum_probs=33.3
Q ss_pred CCEEEEecCCCCCCCCCceEEEEcCcccceecCCCCCCCCceeEEEEEcCCCcEEEEc---CeEEEEEcCCCcc
Q 041767 81 PGLIYLWGDLPDSPESNKSLIACNPLTRLYRVLPQLGSAWSKHGSVLVDSLNKVMVLT---ELAALFFSNSNHW 151 (341)
Q Consensus 81 ~glv~~~g~~~~~~~~~~~~~v~nP~t~~w~~lp~~~~~~~~~~~~~~~~~~ki~~~g---~~~evYd~~t~~W 151 (341)
+|-.++.|+. .+.+.+||..+.+....-.-... ....+. .+++.++.| +.+.+||..+++-
T Consensus 142 d~~~l~~g~~------dg~i~iwd~~~~~~~~~~~~h~~---~v~~l~-~~~~~l~sg~~dg~i~vwd~~~~~~ 205 (435)
T 1p22_A 142 DDQKIVSGLR------DNTIKIWDKNTLECKRILTGHTG---SVLCLQ-YDERVIITGSSDSTVRVWDVNTGEM 205 (435)
T ss_dssp CSSEEEEEES------SSCEEEEESSSCCEEEEECCCSS---CEEEEE-CCSSEEEEEETTSCEEEEESSSCCE
T ss_pred CCCEEEEEeC------CCeEEEEeCCCCeEEEEEcCCCC---cEEEEE-ECCCEEEEEcCCCeEEEEECCCCcE
Confidence 4444445443 56899999887764332111100 111111 245555554 5799999987754
No 69
>1gxr_A ESG1, transducin-like enhancer protein 1; transcriptional CO-repressor, WD40, transcription repressor, WD repeat; 1.65A {Homo sapiens} SCOP: b.69.4.1 PDB: 2ce8_A 2ce9_A
Probab=60.87 E-value=70 Score=26.45 Aligned_cols=51 Identities=0% Similarity=-0.091 Sum_probs=28.5
Q ss_pred CceEEEEcCcccceec-CCCCCCCCceeEEEEEcCCCcEEEEc---CeEEEEEcCCCc
Q 041767 97 NKSLIACNPLTRLYRV-LPQLGSAWSKHGSVLVDSLNKVMVLT---ELAALFFSNSNH 150 (341)
Q Consensus 97 ~~~~~v~nP~t~~w~~-lp~~~~~~~~~~~~~~~~~~ki~~~g---~~~evYd~~t~~ 150 (341)
...+.+||..+++... +.... . ....+...++++.++.+ +.+.+||.++.+
T Consensus 162 dg~v~~~d~~~~~~~~~~~~~~-~--~i~~~~~~~~~~~l~~~~~dg~i~~~d~~~~~ 216 (337)
T 1gxr_A 162 DGNIAVWDLHNQTLVRQFQGHT-D--GASCIDISNDGTKLWTGGLDNTVRSWDLREGR 216 (337)
T ss_dssp TSCEEEEETTTTEEEEEECCCS-S--CEEEEEECTTSSEEEEEETTSEEEEEETTTTE
T ss_pred CCcEEEEeCCCCceeeeeeccc-C--ceEEEEECCCCCEEEEEecCCcEEEEECCCCc
Confidence 4678999988765432 22111 1 11122333455555554 578999987764
No 70
>3scy_A Hypothetical bacterial 6-phosphogluconolactonase; 7-bladed beta-propeller, structural genomics, joint center F structural genomics, JCSG; HET: MSE; 1.50A {Bacteroides fragilis} PDB: 3fgb_A
Probab=60.35 E-value=79 Score=26.88 Aligned_cols=105 Identities=8% Similarity=0.073 Sum_probs=54.2
Q ss_pred ceeEEEcccccccccccc--c----CCccEEE-EeCCE-EEEEEeeccccccccccceEEEEEEeCCCCcEEEeccCCHH
Q 041767 200 QQFWHCLERREWGDVFDI--L----KRPRLVR-GVGNR-ILMIGGLKSSFTLNASCSTILILRLDLDLLEWEEAGRMPVE 271 (341)
Q Consensus 200 ~v~~yD~~~~~W~~~~~~--~----~~~~lv~-~~~g~-l~vvgg~~~~~~~~~~~~~~~vw~~d~~~~~W~~~~~mp~~ 271 (341)
.|..||+.+++...+... . ..+.-+. .-+|+ ||+.. ... ...+.||.+++.+.+++.+..++..
T Consensus 234 ~v~v~~~~~g~~~~~~~~~~~~~~~~~~~~i~~spdg~~l~v~~-~~~-------~~~i~v~~~~~~~g~~~~~~~~~~g 305 (361)
T 3scy_A 234 TVIAFRYADGMLDEIQTVAADTVNAQGSGDIHLSPDGKYLYASN-RLK-------ADGVAIFKVDETNGTLTKVGYQLTG 305 (361)
T ss_dssp EEEEEEEETTEEEEEEEEESCSSCCCCEEEEEECTTSSEEEEEE-CSS-------SCEEEEEEECTTTCCEEEEEEEECS
T ss_pred eEEEEEecCCceEEeEEEecCCCCCCCcccEEECCCCCEEEEEC-CCC-------CCEEEEEEEcCCCCcEEEeeEecCC
Confidence 578888887766444311 1 1112222 12455 54433 220 1347899998777778777665431
Q ss_pred HHHhhcCCCceEEEecCCEEEEEEcccCcEEEEEeeeCCCCeeEEcC
Q 041767 272 MYRCFSESSKFKVFGMGDKVCFSAKRVGRLALWECEKGGGGEWRWID 318 (341)
Q Consensus 272 ~~~~~~~~~~~~~~~~~~~i~~~~~~~~~v~~yD~~~~~~~~W~~~~ 318 (341)
. . ...+.....+..+++.....+.+.+|++... +.+-+.+.
T Consensus 306 --~-~--~~~~~~spdg~~l~~~~~~~~~v~v~~~d~~-~g~~~~~~ 346 (361)
T 3scy_A 306 --I-H--PRNFIITPNGKYLLVACRDTNVIQIFERDQA-TGLLTDIK 346 (361)
T ss_dssp --S-C--CCEEEECTTSCEEEEEETTTTEEEEEEECTT-TCCEEECS
T ss_pred --C-C--CceEEECCCCCEEEEEECCCCCEEEEEEECC-CCcEeecc
Confidence 0 0 0122223345667777655567778655411 44444443
No 71
>3mkq_A Coatomer beta'-subunit; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae} PDB: 2ynp_A
Probab=58.33 E-value=1.3e+02 Score=28.85 Aligned_cols=53 Identities=8% Similarity=-0.080 Sum_probs=28.0
Q ss_pred CceEEEEcCcccceec-CCCCCCCCceeEEEEEcCCCcEEEEc---CeEEEEEcCCCccc
Q 041767 97 NKSLIACNPLTRLYRV-LPQLGSAWSKHGSVLVDSLNKVMVLT---ELAALFFSNSNHWL 152 (341)
Q Consensus 97 ~~~~~v~nP~t~~w~~-lp~~~~~~~~~~~~~~~~~~ki~~~g---~~~evYd~~t~~W~ 152 (341)
...+.+||..+++... +.... . ....+...++++.++++ +.+.+||..+++..
T Consensus 34 ~g~v~iwd~~~~~~~~~~~~~~-~--~v~~~~~s~~~~~l~~~~~dg~i~vw~~~~~~~~ 90 (814)
T 3mkq_A 34 SGRVEIWNYETQVEVRSIQVTE-T--PVRAGKFIARKNWIIVGSDDFRIRVFNYNTGEKV 90 (814)
T ss_dssp TSEEEEEETTTTEEEEEEECCS-S--CEEEEEEEGGGTEEEEEETTSEEEEEETTTCCEE
T ss_pred CCEEEEEECCCCceEEEEecCC-C--cEEEEEEeCCCCEEEEEeCCCeEEEEECCCCcEE
Confidence 4577888877665432 22111 0 11122223455555544 57999998877653
No 72
>1npe_A Nidogen, entactin; glycoprotein, basement membrane, beta-propeller, EGF-like, structural protein; 2.30A {Mus musculus} SCOP: b.68.5.1
Probab=56.82 E-value=78 Score=25.69 Aligned_cols=207 Identities=7% Similarity=-0.057 Sum_probs=97.9
Q ss_pred cCCEEEEecCCCCCCCCCceEEEEcCcccceecCCCCCCCCceeEEEEEcC-CCcEEEEc---CeEEEEEcCCCcccccc
Q 041767 80 SPGLIYLWGDLPDSPESNKSLIACNPLTRLYRVLPQLGSAWSKHGSVLVDS-LNKVMVLT---ELAALFFSNSNHWLKFS 155 (341)
Q Consensus 80 ~~glv~~~g~~~~~~~~~~~~~v~nP~t~~w~~lp~~~~~~~~~~~~~~~~-~~ki~~~g---~~~evYd~~t~~W~~~~ 155 (341)
.+|.||+.... ...+.++++.++.-..+.+-. ......++++. ++++|+.. +.+.++|.....-+.+.
T Consensus 46 ~~~~ly~~d~~------~~~I~~~~~~g~~~~~~~~~~--~~~p~~ia~d~~~~~lyv~d~~~~~I~~~~~~g~~~~~~~ 117 (267)
T 1npe_A 46 VDKVVYWTDIS------EPSIGRASLHGGEPTTIIRQD--LGSPEGIALDHLGRTIFWTDSQLDRIEVAKMDGTQRRVLF 117 (267)
T ss_dssp TTTEEEEEETT------TTEEEEEESSSCCCEEEECTT--CCCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEE
T ss_pred CCCEEEEEECC------CCEEEEEecCCCCcEEEEECC--CCCccEEEEEecCCeEEEEECCCCEEEEEEcCCCCEEEEE
Confidence 47889888643 568999999876543332211 11222344444 56899874 47888888654322221
Q ss_pred ccCCCCCCCcccccCceEEEe-ecCCCcCCcceeeEeecccCCCCceeEEEcccccccccc-cccCCccEEEEe--CCEE
Q 041767 156 SNLPSKPRSPILMLNSVYALC-DVGSPWRSQWKLFCCNLSSLTNSQQFWHCLERREWGDVF-DILKRPRLVRGV--GNRI 231 (341)
Q Consensus 156 ~~~p~~~r~~~~~~~~~y~~~-~~G~~~~~~~~~~~~~~~~~~~~~v~~yD~~~~~W~~~~-~~~~~~~lv~~~--~g~l 231 (341)
+.....+. .+ ++. ++| .+|........+.|..+++....-+.+. .....+.-++.. +++|
T Consensus 118 ---~~~~~~P~----~i-~vd~~~g--------~lyv~~~~~~~~~I~~~~~dg~~~~~~~~~~~~~P~gia~d~~~~~l 181 (267)
T 1npe_A 118 ---DTGLVNPR----GI-VTDPVRG--------NLYWTDWNRDNPKIETSHMDGTNRRILAQDNLGLPNGLTFDAFSSQL 181 (267)
T ss_dssp ---CSSCSSEE----EE-EEETTTT--------EEEEEECCSSSCEEEEEETTSCCCEEEECTTCSCEEEEEEETTTTEE
T ss_pred ---ECCCCCcc----EE-EEeeCCC--------EEEEEECCCCCcEEEEEecCCCCcEEEEECCCCCCcEEEEcCCCCEE
Confidence 10001110 01 111 012 1221111101134667777643222221 122334434332 5789
Q ss_pred EEEEeeccccccccccceEEEEEEeCCCCcEEEeccCCHHHHHhhcCCCceEEEecCCEEEEEEcccCcEEEEEeeeCCC
Q 041767 232 LMIGGLKSSFTLNASCSTILILRLDLDLLEWEEAGRMPVEMYRCFSESSKFKVFGMGDKVCFSAKRVGRLALWECEKGGG 311 (341)
Q Consensus 232 ~vvgg~~~~~~~~~~~~~~~vw~~d~~~~~W~~~~~mp~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~v~~yD~~~~~~ 311 (341)
|+...... .|+++|..+..=+.+..- . .....+...++.+|+.....+.|.++|+. +
T Consensus 182 yv~d~~~~-----------~I~~~~~~g~~~~~~~~~--------~-~~P~gi~~d~~~lyva~~~~~~v~~~d~~---~ 238 (267)
T 1npe_A 182 CWVDAGTH-----------RAECLNPAQPGRRKVLEG--------L-QYPFAVTSYGKNLYYTDWKTNSVIAMDLA---I 238 (267)
T ss_dssp EEEETTTT-----------EEEEEETTEEEEEEEEEC--------C-CSEEEEEEETTEEEEEETTTTEEEEEETT---T
T ss_pred EEEECCCC-----------EEEEEecCCCceEEEecC--------C-CCceEEEEeCCEEEEEECCCCeEEEEeCC---C
Confidence 98763221 356666643322222110 0 11112223468899887666789999998 4
Q ss_pred Cee-EEcCCCCCCCCCCeeeEEeecc
Q 041767 312 GEW-RWIDGLPGIGDGPCRGFVYEAS 336 (341)
Q Consensus 312 ~~W-~~~~~~~~~~~~~~~~~~~~p~ 336 (341)
.+- ..++. .......|+++.|.
T Consensus 239 g~~~~~i~~---g~~~~p~gi~~~~~ 261 (267)
T 1npe_A 239 SKEMDTFHP---HKQTRLYGITIALS 261 (267)
T ss_dssp TEEEEEECC---SSCCCCCCEEEECS
T ss_pred CCceEEEcc---ccccccceeeecCc
Confidence 432 22321 11113556777665
No 73
>1ijq_A LDL receptor, low-density lipoprotein receptor; beta-propeller, lipid transport; 1.50A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1
Probab=55.87 E-value=93 Score=26.31 Aligned_cols=90 Identities=7% Similarity=0.018 Sum_probs=46.7
Q ss_pred eEEEeeCCCCcEEEeeCCCCCCCCcce-eeccCCEEEEecCCCCCCCCCceEEEEcCcc----cceecCCCCCCCCceeE
Q 041767 50 ALHVYDPNQNQWLRFDLSFLPFRSLHP-VASSPGLIYLWGDLPDSPESNKSLIACNPLT----RLYRVLPQLGSAWSKHG 124 (341)
Q Consensus 50 ~~~~yd~~~~~W~~l~~~~~p~~~~~~-~~~~~glv~~~g~~~~~~~~~~~~~v~nP~t----~~w~~lp~~~~~~~~~~ 124 (341)
.+...|........+-.. +. ....+ +...++.||+.... ...++++++.+ ..-..+-+-. .....
T Consensus 11 ~I~~i~~~~~~~~~~~~~-~~-~p~g~~~d~~~~~ly~~D~~------~~~I~~~~~~g~~~~~~~~~~~~~~--~~~p~ 80 (316)
T 1ijq_A 11 EVRKMTLDRSEYTSLIPN-LR-NVVALDTEVASNRIYWSDLS------QRMICSTQLDRAHGVSSYDTVISRD--IQAPD 80 (316)
T ss_dssp SEEEEETTSCCCEEEECS-CS-SEEEEEEETTTTEEEEEETT------TTEEEEEEC--------CEEEECSS--CSCCC
T ss_pred eEEEEECCCcceEehhcC-CC-ceEEEEEEeCCCEEEEEECC------CCcEEEEECCCCCCCcccEEEEeCC--CCCcC
Confidence 356677776655444211 11 11221 22347889988653 56899999876 2222221111 01122
Q ss_pred EEEEc-CCCcEEEEc---CeEEEEEcCCC
Q 041767 125 SVLVD-SLNKVMVLT---ELAALFFSNSN 149 (341)
Q Consensus 125 ~~~~~-~~~ki~~~g---~~~evYd~~t~ 149 (341)
.++++ .+++||+.. +.++++|....
T Consensus 81 glavd~~~~~ly~~d~~~~~I~~~~~~g~ 109 (316)
T 1ijq_A 81 GLAVDWIHSNIYWTDSVLGTVSVADTKGV 109 (316)
T ss_dssp EEEEETTTTEEEEEETTTTEEEEEETTSS
T ss_pred EEEEeecCCeEEEEECCCCEEEEEeCCCC
Confidence 33444 467899874 47889988654
No 74
>2fp8_A Strictosidine synthase; six bladed beta propeller fold, lyase; 2.30A {Rauvolfia serpentina} PDB: 2fp9_A* 2fpc_A* 2vaq_A* 3v1s_A* 2fpb_A* 2v91_A*
Probab=54.05 E-value=98 Score=25.99 Aligned_cols=59 Identities=7% Similarity=0.046 Sum_probs=34.6
Q ss_pred CceEEEEcCcccceecCCCCCC-------------C----CceeEEEEEcC-CCcEEEEc--CeEEEEEcCCCcccccc
Q 041767 97 NKSLIACNPLTRLYRVLPQLGS-------------A----WSKHGSVLVDS-LNKVMVLT--ELAALFFSNSNHWLKFS 155 (341)
Q Consensus 97 ~~~~~v~nP~t~~w~~lp~~~~-------------~----~~~~~~~~~~~-~~ki~~~g--~~~evYd~~t~~W~~~~ 155 (341)
...++.+|+.+++.+.+..... . -.....+..+. ++++|+.. ..+.+||+.++..+.+.
T Consensus 39 ~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~p~gi~~~~~~g~l~v~d~~~~i~~~d~~~g~~~~~~ 117 (322)
T 2fp8_A 39 DGRVIKYEGPNSGFVDFAYASPYWNKAFCENSTDAEKRPLCGRTYDISYNLQNNQLYIVDCYYHLSVVGSEGGHATQLA 117 (322)
T ss_dssp TSEEEEECCTTTCEEEEEESCTTCCHHHHTTCCCGGGHHHHCCEEEEEEETTTTEEEEEETTTEEEEECTTCEECEEEE
T ss_pred CCeEEEECCCCCceEEEecccccccccccccccchhccccCCCCceEEEcCCCCcEEEEECCCCEEEEeCCCCEEEEec
Confidence 4678999998877664321100 0 01122344554 67888873 45888998877655543
No 75
>1qks_A Cytochrome CD1 nitrite reductase; enzyme, oxidoreductase, denitrification, electron transport, periplasmic; HET: HEC DHE; 1.28A {Paracoccus pantotrophus} SCOP: a.3.1.2 b.70.2.1 PDB: 1aof_A* 1aoq_A* 1aom_A* 1e2r_A* 1hj5_A* 1h9x_A* 1h9y_A* 1hcm_A* 1hj3_A* 1hj4_A* 1dy7_A* 1gq1_A*
Probab=51.13 E-value=1.6e+02 Score=27.57 Aligned_cols=57 Identities=11% Similarity=0.010 Sum_probs=35.9
Q ss_pred CCEEEEecCCCCCCCCCceEEEEcCcccceec-CCCCCCCCceeEEEEEcCCC-cEEEEc--CeEEEEEcC
Q 041767 81 PGLIYLWGDLPDSPESNKSLIACNPLTRLYRV-LPQLGSAWSKHGSVLVDSLN-KVMVLT--ELAALFFSN 147 (341)
Q Consensus 81 ~glv~~~g~~~~~~~~~~~~~v~nP~t~~w~~-lp~~~~~~~~~~~~~~~~~~-ki~~~g--~~~evYd~~ 147 (341)
++++++.... .+.+.++|+.|++-.. ++ .. ..-+ .+..++++ .+|+.+ +.+.+||..
T Consensus 166 ~~~~~V~~~~------~~~V~viD~~t~~v~~~i~-~g--~~p~-~v~~SpDGr~lyv~~~dg~V~viD~~ 226 (567)
T 1qks_A 166 ENLFSVTLRD------AGQIALIDGSTYEIKTVLD-TG--YAVH-ISRLSASGRYLFVIGRDGKVNMIDLW 226 (567)
T ss_dssp GGEEEEEETT------TTEEEEEETTTCCEEEEEE-CS--SCEE-EEEECTTSCEEEEEETTSEEEEEETT
T ss_pred CceEEEEeCC------CCeEEEEECCCCeEEEEEe-CC--CCcc-ceEECCCCCEEEEEcCCCeEEEEECC
Confidence 5677777643 6799999999986543 32 21 1123 33444555 566654 479999985
No 76
>2hes_X YDR267CP; beta-propeller, WD40 repeat, biosynthetic protein; 1.70A {Saccharomyces cerevisiae}
Probab=51.01 E-value=1.1e+02 Score=25.71 Aligned_cols=117 Identities=15% Similarity=0.043 Sum_probs=55.6
Q ss_pred ceeEEEcccccccccccccCC---ccEEEEe-C--CEEEEEEeeccccccccccceEEEEEEeCC----CCcEEEeccCC
Q 041767 200 QQFWHCLERREWGDVFDILKR---PRLVRGV-G--NRILMIGGLKSSFTLNASCSTILILRLDLD----LLEWEEAGRMP 269 (341)
Q Consensus 200 ~v~~yD~~~~~W~~~~~~~~~---~~lv~~~-~--g~l~vvgg~~~~~~~~~~~~~~~vw~~d~~----~~~W~~~~~mp 269 (341)
.|..+|..++.|..+.....+ ...+.+. + +.+++.|+.+ .++++|.++.. ...|.....++
T Consensus 176 ~i~iW~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~l~s~s~D---------~~v~iw~~~~~~~~~~~~~~~~~~~~ 246 (330)
T 2hes_X 176 TVRIWKDYDDDWECVAVLNGHEGTVWSSDFDKTEGVFRLCSGSDD---------STVRVWKYMGDDEDDQQEWVCEAILP 246 (330)
T ss_dssp CEEEEEEETTEEEEEEEECCCSSCEEEEEECCSSSSCEEEEEETT---------SCEEEEEEEEECTTSCEEEEEEEECC
T ss_pred eEEEEECCCCCeeEEEEccCCCCcEEEEEecCCCCeeEEEEEeCC---------CeEEEEEecCCCccccceeEEeeecc
Confidence 577888877666544311111 1112211 1 3344444332 24889988642 33576655554
Q ss_pred HHHHHhhcCCCceEEEe--cCCEEEEEEcccCcEEEEEeeeCCCCeeEEcCCCCCCCCC-CeeeEEeec
Q 041767 270 VEMYRCFSESSKFKVFG--MGDKVCFSAKRVGRLALWECEKGGGGEWRWIDGLPGIGDG-PCRGFVYEA 335 (341)
Q Consensus 270 ~~~~~~~~~~~~~~~~~--~~~~i~~~~~~~~~v~~yD~~~~~~~~W~~~~~~~~~~~~-~~~~~~~~p 335 (341)
.. . ...+..+. .++.+ +.+...+.+.+||.. +.+|+.+......-.. .+..+.|.|
T Consensus 247 ~~-----h-~~~v~~v~~s~~~~l-~s~~~dg~v~iw~~~---~~~~~~~~~~~~~h~~~~v~~v~~~~ 305 (330)
T 2hes_X 247 DV-----H-KRQVYNVAWGFNGLI-ASVGADGVLAVYEEV---DGEWKVFAKRALCHGVYEINVVKWLE 305 (330)
T ss_dssp SC-----C-SSCEEEEEECTTSCE-EEEETTSCEEEEEEE---TTEEEEEEEESCTTTTSCEEEEEEC-
T ss_pred cc-----c-ccceEEEEEcCCCEE-EEEeCCCEEEEEEcC---CCceEEEeccccccccceEEEEEEec
Confidence 21 0 11223332 23333 334334678999999 7878654321111112 456666766
No 77
>3lrv_A PRE-mRNA-splicing factor 19; PRP19, WD40, E3 ubiquitin ligase, spliceosome, DNA damage, D repair, mRNA processing, nucleus; 2.60A {Saccharomyces cerevisiae}
Probab=50.05 E-value=1.2e+02 Score=25.66 Aligned_cols=54 Identities=7% Similarity=-0.062 Sum_probs=32.7
Q ss_pred CceEEEEcCcccceecCCCCCCCCceeEEEEEcCCCcEEEEc---CeEEEEEcCCCcc
Q 041767 97 NKSLIACNPLTRLYRVLPQLGSAWSKHGSVLVDSLNKVMVLT---ELAALFFSNSNHW 151 (341)
Q Consensus 97 ~~~~~v~nP~t~~w~~lp~~~~~~~~~~~~~~~~~~ki~~~g---~~~evYd~~t~~W 151 (341)
.+.+.+||..+++....-....... ...+...+++++++.| +.+.+||.++.+-
T Consensus 148 dg~i~~wd~~~~~~~~~~~~~~~~~-i~~~~~~pdg~~lasg~~dg~i~iwd~~~~~~ 204 (343)
T 3lrv_A 148 RGTIGFQSYEDDSQYIVHSAKSDVE-YSSGVLHKDSLLLALYSPDGILDVYNLSSPDQ 204 (343)
T ss_dssp TCCEEEEESSSSCEEEEECCCSSCC-CCEEEECTTSCEEEEECTTSCEEEEESSCTTS
T ss_pred CCcEEEEECCCCcEEEEEecCCCCc-eEEEEECCCCCEEEEEcCCCEEEEEECCCCCC
Confidence 5678999998877643321111111 1123344567777775 5799999987754
No 78
>1pjx_A Dfpase, DIISOPROPYLFLUOROPHOSPHATASE; phosphotriesterase (PTE), nitrogen-calcium coordination, BET propeller; HET: ME2 MES PGE; 0.85A {Loligo vulgaris} SCOP: b.68.6.1 PDB: 1e1a_A* 2gvv_A* 2gvw_A 3byc_A 3kgg_A 3o4p_A* 3li3_A 2gvx_A 2gvu_A 3li4_A 2iaq_A 3li5_A* 2iao_A 2iap_A 2iau_A 2iax_A 2iaw_A 2ias_A 2iat_A 2iar_A ...
Probab=50.02 E-value=1.1e+02 Score=25.21 Aligned_cols=82 Identities=4% Similarity=-0.076 Sum_probs=45.9
Q ss_pred ceEEEeeCCCCcEEEeeCCC---CCCCCcceeeccC-CEEEEecCCCCCCCCCceEEEEcCcccceecC-CCCCCC--Cc
Q 041767 49 AALHVYDPNQNQWLRFDLSF---LPFRSLHPVASSP-GLIYLWGDLPDSPESNKSLIACNPLTRLYRVL-PQLGSA--WS 121 (341)
Q Consensus 49 ~~~~~yd~~~~~W~~l~~~~---~p~~~~~~~~~~~-glv~~~g~~~~~~~~~~~~~v~nP~t~~w~~l-p~~~~~--~~ 121 (341)
..+..||+.+.++..+..+. .......+....+ |.|++... ...+.++|+. ++...+ ...... ..
T Consensus 46 ~~i~~~d~~~g~~~~~~~~~~~~~~~~~~~i~~~~~~g~l~v~~~-------~~~l~~~d~~-g~~~~~~~~~~~~~~~~ 117 (314)
T 1pjx_A 46 GEILRIDLKTGKKTVICKPEVNGYGGIPAGCQCDRDANQLFVADM-------RLGLLVVQTD-GTFEEIAKKDSEGRRMQ 117 (314)
T ss_dssp CEEEEECTTTCCEEEEECCEETTEECCEEEEEECSSSSEEEEEET-------TTEEEEEETT-SCEEECCSBCTTSCBCB
T ss_pred CEEEEEeCCCCcEEEEEecccCCCCCCCceEEEecCCCcEEEEEC-------CCCEEEEeCC-CCEEEEEeccCCCcccc
Confidence 45788998888887665321 0011122233345 88877653 2378999998 777665 322111 11
Q ss_pred eeEEEEEcCCCcEEEEc
Q 041767 122 KHGSVLVDSLNKVMVLT 138 (341)
Q Consensus 122 ~~~~~~~~~~~ki~~~g 138 (341)
....+..+.++++++..
T Consensus 118 ~~~~i~~d~~g~l~v~~ 134 (314)
T 1pjx_A 118 GCNDCAFDYEGNLWITA 134 (314)
T ss_dssp CCCEEEECTTSCEEEEE
T ss_pred CCcCEEECCCCCEEEEe
Confidence 12244556667888764
No 79
>2p4o_A Hypothetical protein; putative lactonase, structural genomics, joint center for ST genomics, JCSG, protein structure initiative, PSI-2; HET: MSE; 1.90A {Nostoc punctiforme} SCOP: b.68.6.3
Probab=49.72 E-value=1.1e+02 Score=25.44 Aligned_cols=69 Identities=7% Similarity=0.032 Sum_probs=41.9
Q ss_pred eeccCCEEEEecCCCCCCCCCceEEEEcCcccceecCCCCCCCCceeEEEEEcCCCcEEEEc--C---eEEEEEcCCCcc
Q 041767 77 VASSPGLIYLWGDLPDSPESNKSLIACNPLTRLYRVLPQLGSAWSKHGSVLVDSLNKVMVLT--E---LAALFFSNSNHW 151 (341)
Q Consensus 77 ~~~~~glv~~~g~~~~~~~~~~~~~v~nP~t~~w~~lp~~~~~~~~~~~~~~~~~~ki~~~g--~---~~evYd~~t~~W 151 (341)
....+|.||+.... ...++++||.++.-..++. . .....+..+.++++|+.. . .+.+||..+++.
T Consensus 38 a~~~~g~lyv~d~~------~~~I~~~d~~g~~~~~~~~-~---~~p~gia~~~dG~l~vad~~~~~~~v~~~d~~~g~~ 107 (306)
T 2p4o_A 38 ASAPDGTIFVTNHE------VGEIVSITPDGNQQIHATV-E---GKVSGLAFTSNGDLVATGWNADSIPVVSLVKSDGTV 107 (306)
T ss_dssp EECTTSCEEEEETT------TTEEEEECTTCCEEEEEEC-S---SEEEEEEECTTSCEEEEEECTTSCEEEEEECTTSCE
T ss_pred EECCCCCEEEEeCC------CCeEEEECCCCceEEEEeC-C---CCceeEEEcCCCcEEEEeccCCcceEEEEcCCCCeE
Confidence 33346778877643 4679999998754322221 1 123344455667888864 1 377888888887
Q ss_pred cccc
Q 041767 152 LKFS 155 (341)
Q Consensus 152 ~~~~ 155 (341)
+.+.
T Consensus 108 ~~~~ 111 (306)
T 2p4o_A 108 ETLL 111 (306)
T ss_dssp EEEE
T ss_pred EEEE
Confidence 6655
No 80
>1gxr_A ESG1, transducin-like enhancer protein 1; transcriptional CO-repressor, WD40, transcription repressor, WD repeat; 1.65A {Homo sapiens} SCOP: b.69.4.1 PDB: 2ce8_A 2ce9_A
Probab=48.54 E-value=1.1e+02 Score=25.10 Aligned_cols=55 Identities=13% Similarity=0.032 Sum_probs=29.5
Q ss_pred CceEEEEcCcccceecCCCCCCCCceeEEEEEcCCCcEEEEc---CeEEEEEcCCCcc
Q 041767 97 NKSLIACNPLTRLYRVLPQLGSAWSKHGSVLVDSLNKVMVLT---ELAALFFSNSNHW 151 (341)
Q Consensus 97 ~~~~~v~nP~t~~w~~lp~~~~~~~~~~~~~~~~~~ki~~~g---~~~evYd~~t~~W 151 (341)
...+.+||..+++......+.........+...++++.++++ +.+.+||.++++-
T Consensus 118 d~~i~~~d~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~v~~~d~~~~~~ 175 (337)
T 1gxr_A 118 ASTLSIWDLAAPTPRIKAELTSSAPACYALAISPDSKVCFSCCSDGNIAVWDLHNQTL 175 (337)
T ss_dssp SSEEEEEECCCC--EEEEEEECSSSCEEEEEECTTSSEEEEEETTSCEEEEETTTTEE
T ss_pred CCcEEEEECCCCCcceeeecccCCCceEEEEECCCCCEEEEEeCCCcEEEEeCCCCce
Confidence 468999999887744332221111111122333455555554 5799999887654
No 81
>1npe_A Nidogen, entactin; glycoprotein, basement membrane, beta-propeller, EGF-like, structural protein; 2.30A {Mus musculus} SCOP: b.68.5.1
Probab=48.42 E-value=1.1e+02 Score=24.81 Aligned_cols=91 Identities=8% Similarity=-0.082 Sum_probs=47.6
Q ss_pred ceEEEeeCCCCcEEEeeCCCCCCCCcce-eeccCCEEEEecCCCCCCCCCceEEEEcCcccceecCCCCCCCCceeEEEE
Q 041767 49 AALHVYDPNQNQWLRFDLSFLPFRSLHP-VASSPGLIYLWGDLPDSPESNKSLIACNPLTRLYRVLPQLGSAWSKHGSVL 127 (341)
Q Consensus 49 ~~~~~yd~~~~~W~~l~~~~~p~~~~~~-~~~~~glv~~~g~~~~~~~~~~~~~v~nP~t~~w~~lp~~~~~~~~~~~~~ 127 (341)
..+..+|+....-..+....+. ....+ +...+|.||+.... ...+.++|+....-+.+.+... .....+.
T Consensus 58 ~~I~~~~~~g~~~~~~~~~~~~-~p~~ia~d~~~~~lyv~d~~------~~~I~~~~~~g~~~~~~~~~~~--~~P~~i~ 128 (267)
T 1npe_A 58 PSIGRASLHGGEPTTIIRQDLG-SPEGIALDHLGRTIFWTDSQ------LDRIEVAKMDGTQRRVLFDTGL--VNPRGIV 128 (267)
T ss_dssp TEEEEEESSSCCCEEEECTTCC-CEEEEEEETTTTEEEEEETT------TTEEEEEETTSCSCEEEECSSC--SSEEEEE
T ss_pred CEEEEEecCCCCcEEEEECCCC-CccEEEEEecCCeEEEEECC------CCEEEEEEcCCCCEEEEEECCC--CCccEEE
Confidence 4566777765433322211111 11221 23347899988653 5689999987654433322111 1223444
Q ss_pred EcC-CCcEEEEc-----CeEEEEEcCC
Q 041767 128 VDS-LNKVMVLT-----ELAALFFSNS 148 (341)
Q Consensus 128 ~~~-~~ki~~~g-----~~~evYd~~t 148 (341)
+++ ++++|+.. +.+++++...
T Consensus 129 vd~~~g~lyv~~~~~~~~~I~~~~~dg 155 (267)
T 1npe_A 129 TDPVRGNLYWTDWNRDNPKIETSHMDG 155 (267)
T ss_dssp EETTTTEEEEEECCSSSCEEEEEETTS
T ss_pred EeeCCCEEEEEECCCCCcEEEEEecCC
Confidence 554 57888874 3567777654
No 82
>2dg1_A DRP35, lactonase; beta propeller, hydrolase; 1.72A {Staphylococcus aureus} SCOP: b.68.6.1 PDB: 2dg0_A 2dso_A
Probab=48.32 E-value=1.2e+02 Score=25.29 Aligned_cols=67 Identities=10% Similarity=0.088 Sum_probs=42.7
Q ss_pred eccCCEEEEecCCCCCCCCCceEEEEcCcccceecCCCCCCCCceeEEEEEcCCCcEEEEc-------CeEEEEEcCCCc
Q 041767 78 ASSPGLIYLWGDLPDSPESNKSLIACNPLTRLYRVLPQLGSAWSKHGSVLVDSLNKVMVLT-------ELAALFFSNSNH 150 (341)
Q Consensus 78 ~~~~glv~~~g~~~~~~~~~~~~~v~nP~t~~w~~lp~~~~~~~~~~~~~~~~~~ki~~~g-------~~~evYd~~t~~ 150 (341)
...+|.|++.+.. ...+.++|+.+++.+.+..... .....+..++++++++.. ..+.+||..++.
T Consensus 52 ~~~~g~l~~~~~~------~~~i~~~d~~~~~~~~~~~~~~--~~~~~i~~~~dg~l~v~~~~~~~~~~~i~~~d~~~~~ 123 (333)
T 2dg1_A 52 FDRQGQLFLLDVF------EGNIFKINPETKEIKRPFVSHK--ANPAAIKIHKDGRLFVCYLGDFKSTGGIFAATENGDN 123 (333)
T ss_dssp ECTTSCEEEEETT------TCEEEEECTTTCCEEEEEECSS--SSEEEEEECTTSCEEEEECTTSSSCCEEEEECTTSCS
T ss_pred ECCCCCEEEEECC------CCEEEEEeCCCCcEEEEeeCCC--CCcceEEECCCCcEEEEeCCCCCCCceEEEEeCCCCE
Confidence 3456777776543 4689999999988876532111 112234455667888764 268899988776
Q ss_pred cc
Q 041767 151 WL 152 (341)
Q Consensus 151 W~ 152 (341)
-+
T Consensus 124 ~~ 125 (333)
T 2dg1_A 124 LQ 125 (333)
T ss_dssp CE
T ss_pred EE
Confidence 54
No 83
>2iwa_A Glutamine cyclotransferase; pyroglutamate, acyltransferase, glutaminyl CYCL N-terminal cyclisation; HET: NAG; 1.6A {Carica papaya} PDB: 2faw_A*
Probab=48.10 E-value=1.2e+02 Score=25.28 Aligned_cols=90 Identities=7% Similarity=-0.105 Sum_probs=54.8
Q ss_pred CceEEEeeCCCCcEE-EeeCCCCCCCCcceeeccCCEEEEecCCCCCCCCCceEEEEcCccccee-cCCC-CCCCCceeE
Q 041767 48 AAALHVYDPNQNQWL-RFDLSFLPFRSLHPVASSPGLIYLWGDLPDSPESNKSLIACNPLTRLYR-VLPQ-LGSAWSKHG 124 (341)
Q Consensus 48 ~~~~~~yd~~~~~W~-~l~~~~~p~~~~~~~~~~~glv~~~g~~~~~~~~~~~~~v~nP~t~~w~-~lp~-~~~~~~~~~ 124 (341)
...+..+|+.+++-. +++++..+. . ..++..++.||..... .+.+.++|+.|.+-. .+|. ++. +
T Consensus 43 ~s~v~~iD~~tg~v~~~i~l~~~~f-g-eGi~~~g~~lyv~t~~------~~~v~viD~~t~~v~~~i~~g~~~-----g 109 (266)
T 2iwa_A 43 RSSVRQVALQTGKVENIHKMDDSYF-G-EGLTLLNEKLYQVVWL------KNIGFIYDRRTLSNIKNFTHQMKD-----G 109 (266)
T ss_dssp TCEEEEEETTTCCEEEEEECCTTCC-E-EEEEEETTEEEEEETT------CSEEEEEETTTTEEEEEEECCSSS-----C
T ss_pred CCEEEEEECCCCCEEEEEecCCCcc-e-EEEEEeCCEEEEEEec------CCEEEEEECCCCcEEEEEECCCCC-----e
Confidence 456888999987643 444432221 1 1356668899988754 678999999987543 3331 121 2
Q ss_pred EEEEcCCCcEEEEc--CeEEEEEcCCCc
Q 041767 125 SVLVDSLNKVMVLT--ELAALFFSNSNH 150 (341)
Q Consensus 125 ~~~~~~~~ki~~~g--~~~evYd~~t~~ 150 (341)
..+...+.++|+.. +.+.+.|+++.+
T Consensus 110 ~glt~Dg~~l~vs~gs~~l~viD~~t~~ 137 (266)
T 2iwa_A 110 WGLATDGKILYGSDGTSILYEIDPHTFK 137 (266)
T ss_dssp CEEEECSSSEEEECSSSEEEEECTTTCC
T ss_pred EEEEECCCEEEEECCCCeEEEEECCCCc
Confidence 11221245777664 468888988765
No 84
>4a2l_A BT_4663, two-component system sensor histidine kinase/RESP; transcription, beta-propeller; HET: PGE PG4 MES 2PE; 2.60A {Bacteroides thetaiotaomicron} PDB: 4a2m_A*
Probab=47.53 E-value=2.1e+02 Score=27.81 Aligned_cols=224 Identities=10% Similarity=0.043 Sum_probs=117.6
Q ss_pred eEEEeeCCCCcEEEeeCCC-----CCCCCc-ceeeccCCEEEEecCCCCCCCCCceEEEEcCcccceecCCCCCC---CC
Q 041767 50 ALHVYDPNQNQWLRFDLSF-----LPFRSL-HPVASSPGLIYLWGDLPDSPESNKSLIACNPLTRLYRVLPQLGS---AW 120 (341)
Q Consensus 50 ~~~~yd~~~~~W~~l~~~~-----~p~~~~-~~~~~~~glv~~~g~~~~~~~~~~~~~v~nP~t~~w~~lp~~~~---~~ 120 (341)
.+..||+.++++..+.... ++.... .+..-.+|.|.+.. ...+.++|+.++++..+...+. ..
T Consensus 236 Gl~~~~~~~~~~~~~~~~~~~~~~l~~~~i~~i~~d~~g~lWigt--------~~Gl~~~~~~~~~~~~~~~~~~~~~~l 307 (795)
T 4a2l_A 236 GLFLINPKTKEIKNYLHSPSNPKSISSNYIRSLAMDSQNRLWIGT--------FNDLNIYHEGTDSFASYSSNPVENGSL 307 (795)
T ss_dssp CEEEEETTTTEEEEECCCTTCTTSCSCSBEEEEEECTTSCEEEEE--------SSCEEEEETTTTEEEEECCCTTSTTSC
T ss_pred CeEEEeCCCCeEEEeecCCCCccccCCCeEEEEEEcCCCCEEEEe--------CChhheEcCCCCeEEEEecCCCCCCCC
Confidence 4677888888877765321 111111 11222356666543 1258899999999887643211 11
Q ss_pred -cee-EEEEEcCCCcEEEEc--CeEEEEEcCCCccccccccCCCCCCCcccccCceEEEee--cCCCcCCcceeeEeecc
Q 041767 121 -SKH-GSVLVDSLNKVMVLT--ELAALFFSNSNHWLKFSSNLPSKPRSPILMLNSVYALCD--VGSPWRSQWKLFCCNLS 194 (341)
Q Consensus 121 -~~~-~~~~~~~~~ki~~~g--~~~evYd~~t~~W~~~~~~~p~~~r~~~~~~~~~y~~~~--~G~~~~~~~~~~~~~~~ 194 (341)
... ..++.|.++.+.+-. +.+..||+.++.++.... .+. . .....+.+..++. .|.+| .+ +
T Consensus 308 ~~~~i~~i~~D~~g~lWigt~~~Gl~~~~~~~~~~~~~~~-~~~-~--~~l~~~~V~~i~~d~~g~lW-------iG--t 374 (795)
T 4a2l_A 308 SQRSVRSIFMDSQGGMWLGTYFGGLNYYHPIRNRFKNIRN-IPY-K--NSLSDNVVSCIVEDKDKNLW-------IG--T 374 (795)
T ss_dssp SSSCEEEEEECTTSCEEEEESSSCEEEECGGGGSSEEECC-CTT-S--SSCSCSSEEEEEECTTSCEE-------EE--E
T ss_pred CCCcEEEEEEeCCcCEEEEECCCCeEEeCCCcccceEEcC-CCC-C--CCCCCCeeEEEEECCCCCEE-------EE--E
Confidence 111 244556667777653 568999998888876542 221 0 0111223433332 12222 11 1
Q ss_pred cCCCCceeEEEccccccccccc-------ccCC---ccEEEEeCCE-EEEEEeeccccccccccceEEEEEEeCCCCcEE
Q 041767 195 SLTNSQQFWHCLERREWGDVFD-------ILKR---PRLVRGVGNR-ILMIGGLKSSFTLNASCSTILILRLDLDLLEWE 263 (341)
Q Consensus 195 ~~~~~~v~~yD~~~~~W~~~~~-------~~~~---~~lv~~~~g~-l~vvgg~~~~~~~~~~~~~~~vw~~d~~~~~W~ 263 (341)
.. +.+..||+.+++++.... .+.. ..+..-.+|+ |++ |.... .++.+|+.++.++
T Consensus 375 ~~--~Gl~~~~~~~~~~~~~~~~~~~~~~~l~~~~v~~i~~d~~g~~lWi-gt~~~-----------Gl~~~d~~~~~~~ 440 (795)
T 4a2l_A 375 ND--GGLNLYNPITQRFTSYTLQEDESARGIGSNNIKAVYVDEKKSLVYI-GTHAG-----------GLSILHRNSGQVE 440 (795)
T ss_dssp SS--SCEEEECTTTCCEEEECCC------CCSCSCEEEEEEETTTTEEEE-EETTT-----------EEEEEETTTCCEE
T ss_pred CC--CCeEEEcCCCCcEEEEecCCCCcccCCCCccEEEEEEcCCCCEEEE-EeCcC-----------ceeEEeCCCCcEE
Confidence 11 247789998887766531 1111 1222212566 554 43212 2567788777777
Q ss_pred EeccCCHHHHHhhcCCCceEEEe--cCCEEEEEEcccCcEEEEEeeeCCCCeeEEcC
Q 041767 264 EAGRMPVEMYRCFSESSKFKVFG--MGDKVCFSAKRVGRLALWECEKGGGGEWRWID 318 (341)
Q Consensus 264 ~~~~mp~~~~~~~~~~~~~~~~~--~~~~i~~~~~~~~~v~~yD~~~~~~~~W~~~~ 318 (341)
.+...... .....+.++. ..+.|++... ..+..||+. +++|+.+.
T Consensus 441 ~~~~~~~~-----l~~~~v~~i~~d~~g~lwigt~--~Gl~~~~~~---~~~~~~~~ 487 (795)
T 4a2l_A 441 NFNQRNSQ-----LVNENVYAILPDGEGNLWLGTL--SALVRFNPE---QRSFTTIE 487 (795)
T ss_dssp EECTTTSC-----CSCSCEEEEEECSSSCEEEEES--SCEEEEETT---TTEEEECC
T ss_pred EeecCCCC-----cCCCeeEEEEECCCCCEEEEec--CceeEEeCC---CCeEEEcc
Confidence 76531111 1012233332 2467887654 579999999 88888765
No 85
>3p5b_L Low density lipoprotein receptor variant; B-propellor, convertase, hydrolase-lipid binding P complex; 3.30A {Homo sapiens} PDB: 3p5c_L
Probab=46.25 E-value=1.6e+02 Score=26.03 Aligned_cols=215 Identities=10% Similarity=0.004 Sum_probs=97.2
Q ss_pred eEEEeeCCCCcEEEeeCCCCCCCCcce-eeccCCEEEEecCCCCCCCCCceEEEEcCcccc----eecCCCCCCCCceeE
Q 041767 50 ALHVYDPNQNQWLRFDLSFLPFRSLHP-VASSPGLIYLWGDLPDSPESNKSLIACNPLTRL----YRVLPQLGSAWSKHG 124 (341)
Q Consensus 50 ~~~~yd~~~~~W~~l~~~~~p~~~~~~-~~~~~glv~~~g~~~~~~~~~~~~~v~nP~t~~----w~~lp~~~~~~~~~~ 124 (341)
.+...|........+... +. ....+ +...+|.||..... ...++.+++.... ...+..- ......
T Consensus 93 ~I~~i~l~~~~~~~~~~~-~~-~~~~l~~d~~~~~lywsD~~------~~~I~~~~~~g~~~~~~~~~~~~~--~~~~p~ 162 (400)
T 3p5b_L 93 EVRKMTLDRSEYTSLIPN-LR-NVVALDTEVASNRIYWSDLS------QRMICSTQLDRAHGVSSYDTVISR--DIQAPD 162 (400)
T ss_dssp EEEEECTTSCSCEEEECS-CS-CEEEEEEETTTTEEEEEETT------TTEEEEEEC------CCCEEEECS--SCSCEE
T ss_pred eeEEEccCCcceeEeccc-cC-cceEEeeeeccCceEEEecC------CCeEEEEEcccCCCCCcceEEEeC--CCCCcc
Confidence 345556655555444311 11 11111 22347889988643 4678888886522 2222111 111222
Q ss_pred EEEEc-CCCcEEEEc---CeEEEEEcCCCccccccc-cCCCCCCCcccccCceEEEeecCCCcCCcceeeEeecccCCCC
Q 041767 125 SVLVD-SLNKVMVLT---ELAALFFSNSNHWLKFSS-NLPSKPRSPILMLNSVYALCDVGSPWRSQWKLFCCNLSSLTNS 199 (341)
Q Consensus 125 ~~~~~-~~~ki~~~g---~~~evYd~~t~~W~~~~~-~~p~~~r~~~~~~~~~y~~~~~G~~~~~~~~~~~~~~~~~~~~ 199 (341)
.+.+| .+++||+.. +.++++|.....-+.+.. .+. .++. +.+--.+| .+|.... ....
T Consensus 163 glavD~~~~~lY~~d~~~~~I~~~~~~g~~~~~l~~~~~~-~P~~-------iavdp~~g--------~ly~td~-~~~~ 225 (400)
T 3p5b_L 163 GLAVDWIHSNIYWTDSVLGTVSVADTKGVKRKTLFRENGS-KPRA-------IVVDPVHG--------FMYWTDW-GTPA 225 (400)
T ss_dssp EEEEETTTTEEEEEETTTTEEEEECTTTCSEEEEEECSSC-CEEE-------EEEETTTT--------EEEEEEC-SSSC
T ss_pred cEEEEecCCceEEEECCCCeEEEEeCCCCceEEEEeCCCC-Ccce-------EEEecccC--------eEEEEeC-CCCC
Confidence 44454 367899874 478888887654433321 011 1110 11100112 1222110 1113
Q ss_pred ceeEEEccccccccc-ccccCCccEEEEe--CCEEEEEEeeccccccccccceEEEEEEeCCCCcEEEeccCCHHHHHhh
Q 041767 200 QQFWHCLERREWGDV-FDILKRPRLVRGV--GNRILMIGGLKSSFTLNASCSTILILRLDLDLLEWEEAGRMPVEMYRCF 276 (341)
Q Consensus 200 ~v~~yD~~~~~W~~~-~~~~~~~~lv~~~--~g~l~vvgg~~~~~~~~~~~~~~~vw~~d~~~~~W~~~~~mp~~~~~~~ 276 (341)
.|..+|+....=+.+ ...+..|.-+++. +++||++.... . .|+++|.++..=+.+...+..+
T Consensus 226 ~I~~~~~dG~~~~~~~~~~l~~P~glavd~~~~~lY~aD~~~---------~--~I~~~d~dG~~~~~~~~~~~~l---- 290 (400)
T 3p5b_L 226 KIKKGGLNGVDIYSLVTENIQWPNGITLDLLSGRLYWVDSKL---------H--SISSIDVNGGNRKTILEDEKRL---- 290 (400)
T ss_dssp CEEEEETTSCSCEEEECSSCSCEEEEEEETTTTEEEEEETTT---------T--EEEEEETTSCCCEEEEECSSTT----
T ss_pred EEEEEeCCCCccEEEEECCCCceEEEEEEeCCCEEEEEECCC---------C--EEEEEeCCCCccEEEEeCCCCC----
Confidence 577788764321122 1223344444433 68999986321 1 3566665433223332211100
Q ss_pred cCCCceEEEecCCEEEEEEcccCcEEEEEeee
Q 041767 277 SESSKFKVFGMGDKVCFSAKRVGRLALWECEK 308 (341)
Q Consensus 277 ~~~~~~~~~~~~~~i~~~~~~~~~v~~yD~~~ 308 (341)
...+.+...++.||+.....+.|..+|..+
T Consensus 291 --~~P~gl~v~~~~lywtd~~~~~V~~~~~~~ 320 (400)
T 3p5b_L 291 --AHPFSLAVFEDKVFWTDIINEAIFSANRLT 320 (400)
T ss_dssp --SSEEEEEEETTEEEEEESSSCSEEEEESSS
T ss_pred --CCCEEEEEeCCEEEEecCCCCeEEEEEcCC
Confidence 011223335678888776567788888653
No 86
>2qe8_A Uncharacterized protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE UNL PG4; 1.35A {Anabaena variabilis atcc 29413}
Probab=45.33 E-value=74 Score=27.19 Aligned_cols=84 Identities=14% Similarity=0.037 Sum_probs=43.9
Q ss_pred CCEEEEEEeeccccccccccceEEEEEEeCCCCcEEEeccCCHHHHHhhcCCCceEEEecCCEEEEEEc---ccCcEEEE
Q 041767 228 GNRILMIGGLKSSFTLNASCSTILILRLDLDLLEWEEAGRMPVEMYRCFSESSKFKVFGMGDKVCFSAK---RVGRLALW 304 (341)
Q Consensus 228 ~g~l~vvgg~~~~~~~~~~~~~~~vw~~d~~~~~W~~~~~mp~~~~~~~~~~~~~~~~~~~~~i~~~~~---~~~~v~~y 304 (341)
+|+||++...... .+ .-+|+.+|..+++-.+...+|.........-..+.+-..++.+|+... ....+.+|
T Consensus 77 ~g~L~v~D~g~~~-----~~-~~~i~~~d~~tg~~~~~~~~~~~~~~~~~~~~~v~vd~~~g~~yvtd~~~~~~~~i~v~ 150 (343)
T 2qe8_A 77 NGIVWMLDNGNQS-----KS-VPKLVAWDTLNNQLSRVIYLPPPITLSNSFVNDLAVDLIHNFVYISDPAPDDKAALIRV 150 (343)
T ss_dssp SSEEEEEECHHHH-----TS-CCEEEEEETTTTEEEEEEECCTTTSCTTCCCCEEEEETTTTEEEEEECCSGGGCEEEEE
T ss_pred CCcEEEEcCCCCc-----CC-CCeEEEEECCCCeEEEEEECChhhcccccccceEEEecCCCEEEEEcCccCCCCeEEEE
Confidence 4789998632100 00 014667787666644433444221110000112332223578999865 45789999
Q ss_pred EeeeCCCCeeEEcCC
Q 041767 305 ECEKGGGGEWRWIDG 319 (341)
Q Consensus 305 D~~~~~~~~W~~~~~ 319 (341)
|+.+ ...|+.+..
T Consensus 151 d~~~--g~~~r~~~~ 163 (343)
T 2qe8_A 151 DLQT--GLAARVLQG 163 (343)
T ss_dssp ETTT--CCEEEECTT
T ss_pred ECCC--CCEEEEecC
Confidence 9983 456776643
No 87
>2dg1_A DRP35, lactonase; beta propeller, hydrolase; 1.72A {Staphylococcus aureus} SCOP: b.68.6.1 PDB: 2dg0_A 2dso_A
Probab=44.77 E-value=1.4e+02 Score=24.92 Aligned_cols=102 Identities=10% Similarity=-0.013 Sum_probs=54.9
Q ss_pred ceEEEeeCCCCcEEEeeCCCCCCCCcceeeccCCEEEEecCCCCCCCCCceEEEEcCcccceec-CCCCCCCCceeEEEE
Q 041767 49 AALHVYDPNQNQWLRFDLSFLPFRSLHPVASSPGLIYLWGDLPDSPESNKSLIACNPLTRLYRV-LPQLGSAWSKHGSVL 127 (341)
Q Consensus 49 ~~~~~yd~~~~~W~~l~~~~~p~~~~~~~~~~~glv~~~g~~~~~~~~~~~~~v~nP~t~~w~~-lp~~~~~~~~~~~~~ 127 (341)
..+..||+.+.+...+.... ......+...-+|.+++..... ......++++|+.+++.+. ++..... .....+.
T Consensus 66 ~~i~~~d~~~~~~~~~~~~~-~~~~~~i~~~~dg~l~v~~~~~--~~~~~~i~~~d~~~~~~~~~~~~~~~~-~~~~~i~ 141 (333)
T 2dg1_A 66 GNIFKINPETKEIKRPFVSH-KANPAAIKIHKDGRLFVCYLGD--FKSTGGIFAATENGDNLQDIIEDLSTA-YCIDDMV 141 (333)
T ss_dssp CEEEEECTTTCCEEEEEECS-SSSEEEEEECTTSCEEEEECTT--SSSCCEEEEECTTSCSCEEEECSSSSC-CCEEEEE
T ss_pred CEEEEEeCCCCcEEEEeeCC-CCCcceEEECCCCcEEEEeCCC--CCCCceEEEEeCCCCEEEEEEccCccC-CcccceE
Confidence 45778888887776654211 1111222333467666654320 0112579999999988763 3322111 1222344
Q ss_pred EcCCCcEEEEc---------CeEEEEEcCCCccccc
Q 041767 128 VDSLNKVMVLT---------ELAALFFSNSNHWLKF 154 (341)
Q Consensus 128 ~~~~~ki~~~g---------~~~evYd~~t~~W~~~ 154 (341)
.++++++++.. ..+.+||..+++.+.+
T Consensus 142 ~d~~g~l~v~~~~~~~~~~~~~l~~~~~~~~~~~~~ 177 (333)
T 2dg1_A 142 FDSKGGFYFTDFRGYSTNPLGGVYYVSPDFRTVTPI 177 (333)
T ss_dssp ECTTSCEEEEECCCBTTBCCEEEEEECTTSCCEEEE
T ss_pred ECCCCCEEEEeccccccCCCceEEEEeCCCCEEEEe
Confidence 55667888763 2467777776655443
No 88
>1k8k_C P40, ARP2/3 complex 41 kDa subunit, P41-ARC; beta-propeller, structural protein; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1tyq_C* 1u2v_C* 2p9i_C* 2p9k_C* 2p9l_C 2p9n_C* 2p9p_C* 2p9s_C* 2p9u_C* 3rse_C 3dxm_C* 3dxk_C
Probab=44.50 E-value=1.4e+02 Score=25.03 Aligned_cols=96 Identities=8% Similarity=0.066 Sum_probs=48.1
Q ss_pred ceEEEeeCCCCcEEEee-CCCCCCCCcceeeccCCEEEEecCCCCCCCCCceEEEEcCcccceecCCCCCCCCceeEEEE
Q 041767 49 AALHVYDPNQNQWLRFD-LSFLPFRSLHPVASSPGLIYLWGDLPDSPESNKSLIACNPLTRLYRVLPQLGSAWSKHGSVL 127 (341)
Q Consensus 49 ~~~~~yd~~~~~W~~l~-~~~~p~~~~~~~~~~~glv~~~g~~~~~~~~~~~~~v~nP~t~~w~~lp~~~~~~~~~~~~~ 127 (341)
..+.+||..+..+..+. +.........+.-+-+|-+++.++. ...+.+||..++++.....+.........+.
T Consensus 30 ~~v~i~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~~~~~------dg~i~vwd~~~~~~~~~~~~~~~~~~v~~~~ 103 (372)
T 1k8k_C 30 HEVHIYEKSGNKWVQVHELKEHNGQVTGVDWAPDSNRIVTCGT------DRNAYVWTLKGRTWKPTLVILRINRAARCVR 103 (372)
T ss_dssp SEEEEEEEETTEEEEEEEEECCSSCEEEEEEETTTTEEEEEET------TSCEEEEEEETTEEEEEEECCCCSSCEEEEE
T ss_pred CEEEEEeCCCCcEEeeeeecCCCCcccEEEEeCCCCEEEEEcC------CCeEEEEECCCCeeeeeEEeecCCCceeEEE
Confidence 45788888887654433 1111111111122224544444433 4679999998887654322211111111223
Q ss_pred EcCCCcEEEEc---CeEEEEEcCCCc
Q 041767 128 VDSLNKVMVLT---ELAALFFSNSNH 150 (341)
Q Consensus 128 ~~~~~ki~~~g---~~~evYd~~t~~ 150 (341)
..++++.++++ +.+.+||..+..
T Consensus 104 ~~~~~~~l~~~~~d~~v~i~d~~~~~ 129 (372)
T 1k8k_C 104 WAPNEKKFAVGSGSRVISICYFEQEN 129 (372)
T ss_dssp ECTTSSEEEEEETTSSEEEEEEETTT
T ss_pred ECCCCCEEEEEeCCCEEEEEEecCCC
Confidence 33456555554 468888877654
No 89
>3f3f_A Nucleoporin SEH1; structural protein, protein complex, nucleopori complex, nuclear pore complex, macromolecular assembly, MEM coat; 2.90A {Saccharomyces cerevisiae} PDB: 3f3g_A 3f3p_A 3ewe_A
Probab=44.10 E-value=1e+02 Score=25.27 Aligned_cols=80 Identities=20% Similarity=0.346 Sum_probs=40.3
Q ss_pred eEEEEEEeCCCCcEEEeccCCHHHHHhhcCCCceEEEe-c---CCEEEEEEcccCcEEEEEeeeCC----CCeeEEcCCC
Q 041767 249 TILILRLDLDLLEWEEAGRMPVEMYRCFSESSKFKVFG-M---GDKVCFSAKRVGRLALWECEKGG----GGEWRWIDGL 320 (341)
Q Consensus 249 ~~~vw~~d~~~~~W~~~~~mp~~~~~~~~~~~~~~~~~-~---~~~i~~~~~~~~~v~~yD~~~~~----~~~W~~~~~~ 320 (341)
.+.||.++.....++.+..+... ...+.++. . ++.+++.+...+.+.+||+.++. ...|+.+...
T Consensus 34 ~i~iw~~~~~~~~~~~~~~~~~~-------~~~v~~~~~~~~~d~~~l~s~~~dg~v~vwd~~~~~~~~~~~~~~~~~~~ 106 (351)
T 3f3f_A 34 HIKVFKLDKDTSNWELSDSWRAH-------DSSIVAIDWASPEYGRIIASASYDKTVKLWEEDPDQEECSGRRWNKLCTL 106 (351)
T ss_dssp EEEEEEECSSSCCEEEEEEEECC-------SSCEEEEEECCGGGCSEEEEEETTSCEEEEEECTTSCTTSSCSEEEEEEE
T ss_pred eEEEEECCCCCCcceecceeccC-------CCcEEEEEEcCCCCCCEEEEEcCCCeEEEEecCCCcccccccCcceeeee
Confidence 47899987666667665443211 11233332 1 13344444334679999998320 1233333322
Q ss_pred CCCCCCCeeeEEeecc
Q 041767 321 PGIGDGPCRGFVYEAS 336 (341)
Q Consensus 321 ~~~~~~~~~~~~~~p~ 336 (341)
.. ..+.+..+.|.|.
T Consensus 107 ~~-~~~~v~~~~~~~~ 121 (351)
T 3f3f_A 107 ND-SKGSLYSVKFAPA 121 (351)
T ss_dssp CC-CSSCEEEEEECCG
T ss_pred cc-cCCceeEEEEcCC
Confidence 11 1235677777765
No 90
>3nok_A Glutaminyl cyclase; beta-propeller, cyclotransferase, pyrogl transferase; HET: MES DDQ; 1.65A {Myxococcus xanthus}
Probab=43.92 E-value=41 Score=28.31 Aligned_cols=66 Identities=11% Similarity=0.026 Sum_probs=37.3
Q ss_pred EEEEeCCEEEEEEeeccccccccccceEEEEEEeCCCCcEEEeccCCHHHHHhhcCCCceEEEecCCEEEEEEcccCcEE
Q 041767 223 LVRGVGNRILMIGGLKSSFTLNASCSTILILRLDLDLLEWEEAGRMPVEMYRCFSESSKFKVFGMGDKVCFSAKRVGRLA 302 (341)
Q Consensus 223 lv~~~~g~l~vvgg~~~~~~~~~~~~~~~vw~~d~~~~~W~~~~~mp~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~v~ 302 (341)
-+.+.++.||+..|..+. |-++|.++.+=...- ++...+. -.+.-.+++||+.....+.+.
T Consensus 59 GL~~~~~~Ly~stG~~g~-----------v~~iD~~Tgkv~~~~-l~~~~Fg-------eGit~~g~~Ly~ltw~~~~v~ 119 (268)
T 3nok_A 59 GLVFHQGHFFESTGHQGT-----------LRQLSLESAQPVWME-RLGNIFA-------EGLASDGERLYQLTWTEGLLF 119 (268)
T ss_dssp EEEEETTEEEEEETTTTE-----------EEECCSSCSSCSEEE-ECTTCCE-------EEEEECSSCEEEEESSSCEEE
T ss_pred eEEEECCEEEEEcCCCCE-----------EEEEECCCCcEEeEE-CCCCcce-------eEEEEeCCEEEEEEccCCEEE
Confidence 334458899988875431 445666554332222 4432111 112334678888765567788
Q ss_pred EEEee
Q 041767 303 LWECE 307 (341)
Q Consensus 303 ~yD~~ 307 (341)
+||..
T Consensus 120 V~D~~ 124 (268)
T 3nok_A 120 TWSGM 124 (268)
T ss_dssp EEETT
T ss_pred EEECC
Confidence 99987
No 91
>1jmx_B Amine dehydrogenase; oxidoreductase; HET: TRQ HEC; 1.90A {Pseudomonas putida} SCOP: b.69.2.2 PDB: 1jmz_B*
Probab=43.71 E-value=82 Score=26.27 Aligned_cols=20 Identities=5% Similarity=0.042 Sum_probs=14.8
Q ss_pred CCEEEEEEcccCcEEEEEee
Q 041767 288 GDKVCFSAKRVGRLALWECE 307 (341)
Q Consensus 288 ~~~i~~~~~~~~~v~~yD~~ 307 (341)
++.+|+.....+.+.+||+.
T Consensus 54 g~~~~v~~~~~~~i~~~d~~ 73 (349)
T 1jmx_B 54 NRTAYVLNNHYGDIYGIDLD 73 (349)
T ss_dssp SSEEEEEETTTTEEEEEETT
T ss_pred CCEEEEEeCCCCcEEEEeCC
Confidence 45677776555778999998
No 92
>3scy_A Hypothetical bacterial 6-phosphogluconolactonase; 7-bladed beta-propeller, structural genomics, joint center F structural genomics, JCSG; HET: MSE; 1.50A {Bacteroides fragilis} PDB: 3fgb_A
Probab=43.67 E-value=1.5e+02 Score=25.07 Aligned_cols=96 Identities=7% Similarity=0.087 Sum_probs=46.7
Q ss_pred ceEEEeeCCCCcEEEeeCCCCCCCCcceeeccCC-EEEEecCCCCCCCCCceEE--EEcCcccceecCCCCCCCCceeEE
Q 041767 49 AALHVYDPNQNQWLRFDLSFLPFRSLHPVASSPG-LIYLWGDLPDSPESNKSLI--ACNPLTRLYRVLPQLGSAWSKHGS 125 (341)
Q Consensus 49 ~~~~~yd~~~~~W~~l~~~~~p~~~~~~~~~~~g-lv~~~g~~~~~~~~~~~~~--v~nP~t~~w~~lp~~~~~~~~~~~ 125 (341)
..++.+|+.+.....+...... ....+..+-+| +||+.+... .....+. ..|+.|++.+.+......-.....
T Consensus 29 i~~~~~d~~~g~~~~~~~~~~~-~p~~l~~spdg~~l~~~~~~~---~~~~~v~~~~~~~~~g~~~~~~~~~~~~~~p~~ 104 (361)
T 3scy_A 29 IYTFRFNEETGESLPLSDAEVA-NPSYLIPSADGKFVYSVNEFS---KDQAAVSAFAFDKEKGTLHLLNTQKTMGADPCY 104 (361)
T ss_dssp EEEEEEETTTCCEEEEEEEECS-CCCSEEECTTSSEEEEEECCS---STTCEEEEEEEETTTTEEEEEEEEECSSSCEEE
T ss_pred EEEEEEeCCCCCEEEeecccCC-CCceEEECCCCCEEEEEEccC---CCCCcEEEEEEeCCCCcEEEeeEeccCCCCcEE
Confidence 4456678888877765522111 11222333344 577665420 0124554 456666776665433211111222
Q ss_pred EEEcCCCcEEEEc---CeEEEEEcCCC
Q 041767 126 VLVDSLNKVMVLT---ELAALFFSNSN 149 (341)
Q Consensus 126 ~~~~~~~ki~~~g---~~~evYd~~t~ 149 (341)
+.. .+..+++.. +.+.+|+..++
T Consensus 105 ~~~-dg~~l~~~~~~~~~v~~~~~~~~ 130 (361)
T 3scy_A 105 LTT-NGKNIVTANYSGGSITVFPIGQD 130 (361)
T ss_dssp EEE-CSSEEEEEETTTTEEEEEEBCTT
T ss_pred EEE-CCCEEEEEECCCCEEEEEEeCCC
Confidence 222 234566653 47889998653
No 93
>4ggc_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; HET: MRD; 1.35A {Homo sapiens}
Probab=43.46 E-value=82 Score=25.84 Aligned_cols=54 Identities=11% Similarity=-0.029 Sum_probs=31.0
Q ss_pred CceEEEEcCcccceecCCCCCCCCceeEEEEEcCCCcEEEEc---CeEEEEEcCCCc
Q 041767 97 NKSLIACNPLTRLYRVLPQLGSAWSKHGSVLVDSLNKVMVLT---ELAALFFSNSNH 150 (341)
Q Consensus 97 ~~~~~v~nP~t~~w~~lp~~~~~~~~~~~~~~~~~~ki~~~g---~~~evYd~~t~~ 150 (341)
.+.+.+||..|++...+-........-..+...++++.++.| +.+.+||.++++
T Consensus 44 D~tV~iWd~~tg~~~~~~~~~~~~~~V~~v~~~~~~~~l~sgs~Dg~v~iw~~~~~~ 100 (318)
T 4ggc_A 44 DNSVYLWSASSGDILQLLQMEQPGEYISSVAWIKEGNYLAVGTSSAEVQLWDVQQQK 100 (318)
T ss_dssp TTEEEEEETTTCCEEEEEECCSTTCCEEEEEECTTSSEEEEEETTSEEEEEETTTTE
T ss_pred CCEEEEEECCCCCEEEEEEecCCCCeEEEEEECCCCCEEEEEECCCcEEEeecCCce
Confidence 467999999998865432222111111122334556666665 468888887664
No 94
>2hes_X YDR267CP; beta-propeller, WD40 repeat, biosynthetic protein; 1.70A {Saccharomyces cerevisiae}
Probab=42.98 E-value=1.1e+02 Score=25.69 Aligned_cols=77 Identities=16% Similarity=0.242 Sum_probs=38.6
Q ss_pred eEEEEEEeCCCCcEEEeccCCHHHHHhhcCCCceEEEe-c-CCEEEEEEcccCcEEEEEeeeCCCCeeEEcCCCCCCCCC
Q 041767 249 TILILRLDLDLLEWEEAGRMPVEMYRCFSESSKFKVFG-M-GDKVCFSAKRVGRLALWECEKGGGGEWRWIDGLPGIGDG 326 (341)
Q Consensus 249 ~~~vw~~d~~~~~W~~~~~mp~~~~~~~~~~~~~~~~~-~-~~~i~~~~~~~~~v~~yD~~~~~~~~W~~~~~~~~~~~~ 326 (341)
++.||.++.....++.+..+... ...+.++. . .+.+.+.+...+.+.+||.. +..|+.+..+.. -.+
T Consensus 130 ~v~iwd~~~~~~~~~~~~~~~~h-------~~~v~~v~~~p~~~~l~s~s~D~~i~iW~~~---~~~~~~~~~~~~-h~~ 198 (330)
T 2hes_X 130 SVWIWETDESGEEYECISVLQEH-------SQDVKHVIWHPSEALLASSSYDDTVRIWKDY---DDDWECVAVLNG-HEG 198 (330)
T ss_dssp CEEEEECCTTCCCCEEEEEECCC-------SSCEEEEEECSSSSEEEEEETTSCEEEEEEE---TTEEEEEEEECC-CSS
T ss_pred EEEEEeccCCCCCeEEEEEeccC-------CCceEEEEECCCCCEEEEEcCCCeEEEEECC---CCCeeEEEEccC-CCC
Confidence 47899875444445544433211 11223322 1 23344444434678899988 676665443321 123
Q ss_pred CeeeEEeecc
Q 041767 327 PCRGFVYEAS 336 (341)
Q Consensus 327 ~~~~~~~~p~ 336 (341)
.+..+.|.|.
T Consensus 199 ~v~~~~~~~~ 208 (330)
T 2hes_X 199 TVWSSDFDKT 208 (330)
T ss_dssp CEEEEEECCS
T ss_pred cEEEEEecCC
Confidence 4566666664
No 95
>3sfz_A APAF-1, apoptotic peptidase activating factor 1; apoptosis, caspase activation, cytochrome C, procaspase-9, A nucleotide, cytosol; HET: ADP; 3.00A {Mus musculus} PDB: 3shf_A* 3iyt_A* 3iza_A*
Probab=41.96 E-value=2.8e+02 Score=28.33 Aligned_cols=210 Identities=7% Similarity=-0.016 Sum_probs=0.0
Q ss_pred eeeccCCEEEEecCCCCCCCCCceEEEEcCcccceecCCCCCCCCceeEEEEEcCCCcEEEEc---CeEEEEEcCCCccc
Q 041767 76 PVASSPGLIYLWGDLPDSPESNKSLIACNPLTRLYRVLPQLGSAWSKHGSVLVDSLNKVMVLT---ELAALFFSNSNHWL 152 (341)
Q Consensus 76 ~~~~~~glv~~~g~~~~~~~~~~~~~v~nP~t~~w~~lp~~~~~~~~~~~~~~~~~~ki~~~g---~~~evYd~~t~~W~ 152 (341)
+..+-+|-..+.|+. ...+.+||..+++......-...... .+...++++.++.+ +.+.+||..++...
T Consensus 967 ~~~sp~g~~l~~g~~------~g~i~i~d~~~~~~~~~~~~h~~~v~--~l~~s~dg~~l~s~~~dg~i~vwd~~~~~~~ 1038 (1249)
T 3sfz_A 967 CCLSPHLEYVAFGDE------DGAIKIIELPNNRVFSSGVGHKKAVR--HIQFTADGKTLISSSEDSVIQVWNWQTGDYV 1038 (1249)
T ss_dssp EEECTTSSEEEEEET------TSCCEEEETTTTSCEEECCCCSSCCC--CEEECSSSSCEEEECSSSBEEEEETTTTEEE
T ss_pred EEEcCCCCEEEEEcC------CCCEEEEEcCCCceeeecccCCCceE--EEEECCCCCEEEEEcCCCEEEEEECCCCceE
Q ss_pred cccccCCCCCCCcccccCceEEEeecCCCcCCcceeeEeecccCCCCceeEEEcccccccccc--cccCCccEEEEeCCE
Q 041767 153 KFSSNLPSKPRSPILMLNSVYALCDVGSPWRSQWKLFCCNLSSLTNSQQFWHCLERREWGDVF--DILKRPRLVRGVGNR 230 (341)
Q Consensus 153 ~~~~~~p~~~r~~~~~~~~~y~~~~~G~~~~~~~~~~~~~~~~~~~~~v~~yD~~~~~W~~~~--~~~~~~~lv~~~~g~ 230 (341)
.... .........+..+...+.+... +.+..||..+++-...- ..-....+.-..+|+
T Consensus 1039 ~~~~-~~~~v~~~~~~~~~~l~~~~~d-------------------g~v~vwd~~~~~~~~~~~~~~~~v~~~~~s~d~~ 1098 (1249)
T 3sfz_A 1039 FLQA-HQETVKDFRLLQDSRLLSWSFD-------------------GTVKVWNVITGRIERDFTCHQGTVLSCAISSDAT 1098 (1249)
T ss_dssp CCBC-CSSCEEEEEECSSSEEEEEESS-------------------SEEEEEETTTTCCCEEEECCSSCCCCEEECSSSS
T ss_pred EEec-CCCcEEEEEEcCCCcEEEEECC-------------------CcEEEEECCCCceeEEEcccCCcEEEEEECCCCC
Q ss_pred EEEEEeeccccccccccceEEEEEEeCCCCcEEEeccCCHHHHHhhcCCCceEEEec--CCEEEEEEcccCcEEEEEeee
Q 041767 231 ILMIGGLKSSFTLNASCSTILILRLDLDLLEWEEAGRMPVEMYRCFSESSKFKVFGM--GDKVCFSAKRVGRLALWECEK 308 (341)
Q Consensus 231 l~vvgg~~~~~~~~~~~~~~~vw~~d~~~~~W~~~~~mp~~~~~~~~~~~~~~~~~~--~~~i~~~~~~~~~v~~yD~~~ 308 (341)
++++++.++. +.+|.++... .+..+... ...+.++.- ++.+.+.+...+.+.+||+.
T Consensus 1099 ~l~s~s~d~~---------v~iwd~~~~~----~~~~l~~h-------~~~v~~~~~s~dg~~lat~~~dg~i~vwd~~- 1157 (1249)
T 3sfz_A 1099 KFSSTSADKT---------AKIWSFDLLS----PLHELKGH-------NGCVRCSAFSLDGILLATGDDNGEIRIWNVS- 1157 (1249)
T ss_dssp SCEEECCSSC---------CCEECSSSSS----CSBCCCCC-------SSCEEEEEECSSSSEEEEEETTSCCCEEESS-
T ss_pred EEEEEcCCCc---------EEEEECCCcc----eeeeeccC-------CCcEEEEEECCCCCEEEEEeCCCEEEEEECC-
Q ss_pred CCCCeeEEcC------CCCCCCCCCeeeEEeecc
Q 041767 309 GGGGEWRWID------GLPGIGDGPCRGFVYEAS 336 (341)
Q Consensus 309 ~~~~~W~~~~------~~~~~~~~~~~~~~~~p~ 336 (341)
+.+-...- .......+.+.+++|.|.
T Consensus 1158 --~~~~~~~~~~~~~~~~~~~~~~~v~~l~fs~d 1189 (1249)
T 3sfz_A 1158 --DGQLLHSCAPISVEEGTATHGGWVTDVCFSPD 1189 (1249)
T ss_dssp --SSCCCCCCCCCC-------CCSCCCEEEECTT
T ss_pred --CCceEEEeccccccccccccCceEEEEEECCC
No 96
>2xbg_A YCF48-like protein; photosynthesis, photosystem II, beta-propeller, assembly FAC; 1.50A {Thermosynechococcus elongatus}
Probab=41.69 E-value=1.6e+02 Score=24.92 Aligned_cols=89 Identities=10% Similarity=0.135 Sum_probs=44.9
Q ss_pred CCcEEEeeCC-CCCCCCcceeeccCCEEEEecCCCCCCCCCceEEEEcCcccceecCCCCCCCCceeEEEEEcCCCcEEE
Q 041767 58 QNQWLRFDLS-FLPFRSLHPVASSPGLIYLWGDLPDSPESNKSLIACNPLTRLYRVLPQLGSAWSKHGSVLVDSLNKVMV 136 (341)
Q Consensus 58 ~~~W~~l~~~-~~p~~~~~~~~~~~glv~~~g~~~~~~~~~~~~~v~nP~t~~w~~lp~~~~~~~~~~~~~~~~~~ki~~ 136 (341)
-.+|..+..+ .+|...+.+....++.+++.+. ...++.-.-.-++|..+...... ..++ +....++++++
T Consensus 108 G~tW~~~~~~~~~~~~~~~i~~~~~~~~~~~~~-------~g~v~~S~DgG~tW~~~~~~~~~-~~~~-~~~~~~~~~~~ 178 (327)
T 2xbg_A 108 GQSWSQIPLDPKLPGSPRLIKALGNGSAEMITN-------VGAIYRTKDSGKNWQALVQEAIG-VMRN-LNRSPSGEYVA 178 (327)
T ss_dssp TSSCEECCCCTTCSSCEEEEEEEETTEEEEEET-------TCCEEEESSTTSSEEEEECSCCC-CEEE-EEECTTSCEEE
T ss_pred CCCceECccccCCCCCeEEEEEECCCCEEEEeC-------CccEEEEcCCCCCCEEeecCCCc-ceEE-EEEcCCCcEEE
Confidence 3578877643 1332222333344567766653 23455555556678876532211 1222 23334567887
Q ss_pred EcCeEEEEEc---CCCcccccc
Q 041767 137 LTELAALFFS---NSNHWLKFS 155 (341)
Q Consensus 137 ~g~~~evYd~---~t~~W~~~~ 155 (341)
++..-.+|-+ .-.+|+.+.
T Consensus 179 ~g~~G~~~~S~d~gG~tW~~~~ 200 (327)
T 2xbg_A 179 VSSRGSFYSTWEPGQTAWEPHN 200 (327)
T ss_dssp EETTSSEEEEECTTCSSCEEEE
T ss_pred EECCCcEEEEeCCCCCceeECC
Confidence 7632223333 257898875
No 97
>4g56_B MGC81050 protein; protein arginine methyltransferase, protein complexes, histo methylation, transferase; HET: SAH; 2.95A {Xenopus laevis}
Probab=41.57 E-value=1.7e+02 Score=25.02 Aligned_cols=204 Identities=8% Similarity=-0.019 Sum_probs=0.0
Q ss_pred CCEEEEecCCCCCCCCCceEEEEcCcccceecCCCCCCCCceeE--EEEEcCCCcEEEEc---CeEEEEEcCCCcccccc
Q 041767 81 PGLIYLWGDLPDSPESNKSLIACNPLTRLYRVLPQLGSAWSKHG--SVLVDSLNKVMVLT---ELAALFFSNSNHWLKFS 155 (341)
Q Consensus 81 ~glv~~~g~~~~~~~~~~~~~v~nP~t~~w~~lp~~~~~~~~~~--~~~~~~~~ki~~~g---~~~evYd~~t~~W~~~~ 155 (341)
+|.+++.+. .+.+.+||..+++-.........-.... .+...++++.++.+ +.+.+||..+++-...-
T Consensus 105 d~~~l~~s~-------dg~v~lWd~~~~~~~~~~~~~~~~h~~~V~~v~~spdg~~l~sgs~dg~v~iwd~~~~~~~~~~ 177 (357)
T 4g56_B 105 EKGILVASD-------SGAVELWEILEKESLLVNKFAKYEHDDIVKTLSVFSDGTQAVSGGKDFSVKVWDLSQKAVLKSY 177 (357)
T ss_dssp TTEEEEEET-------TSCEEEC--------CCCCEEECCCSSCEEEEEECSSSSEEEEEETTSCEEEEETTTTEEEEEE
T ss_pred CCCEEEEEC-------CCEEEEeeccccceeEEEeeccCCCCCCEEEEEECCCCCEEEEEeCCCeEEEEECCCCcEEEEE
Q ss_pred ccCCCCCCCcccccC---ceEEEeecCCCcCCcceeeEeecccCCCCceeEEEcccccccccccccCCccEEEEe-----
Q 041767 156 SNLPSKPRSPILMLN---SVYALCDVGSPWRSQWKLFCCNLSSLTNSQQFWHCLERREWGDVFDILKRPRLVRGV----- 227 (341)
Q Consensus 156 ~~~p~~~r~~~~~~~---~~y~~~~~G~~~~~~~~~~~~~~~~~~~~~v~~yD~~~~~W~~~~~~~~~~~lv~~~----- 227 (341)
. .....-..+.... .+++.+... +.|..||+++.+-............+...
T Consensus 178 ~-~h~~~v~~v~~s~~~~~~~~s~~~d-------------------g~v~~wd~~~~~~~~~~~~~~~~~~v~~v~~sp~ 237 (357)
T 4g56_B 178 N-AHSSEVNCVAACPGKDTIFLSCGED-------------------GRILLWDTRKPKPATRIDFCASDTIPTSVTWHPE 237 (357)
T ss_dssp C-CCSSCEEEEEECTTCSSCEEEEETT-------------------SCEEECCTTSSSCBCBCCCTTCCSCEEEEEECTT
T ss_pred c-CCCCCEEEEEEccCCCceeeeeccC-------------------CceEEEECCCCceeeeeeeccccccccchhhhhc
Q ss_pred CCEEEEEEeeccccccccccceEEEEEEeCCCCcEEEeccCCHHHHHhhcCCCceEEEecCCEEEEEEcccCcEEEEEee
Q 041767 228 GNRILMIGGLKSSFTLNASCSTILILRLDLDLLEWEEAGRMPVEMYRCFSESSKFKVFGMGDKVCFSAKRVGRLALWECE 307 (341)
Q Consensus 228 ~g~l~vvgg~~~~~~~~~~~~~~~vw~~d~~~~~W~~~~~mp~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~v~~yD~~ 307 (341)
++.++++|+.+.. +.+|.+ .....-..+......... +...-.+..+.+.+...+.|.+||+.
T Consensus 238 ~~~~la~g~~d~~---------i~~wd~-~~~~~~~~~~~~~~~v~~-------l~~sp~~~~~lasgs~D~~i~iwd~~ 300 (357)
T 4g56_B 238 KDDTFACGDETGN---------VSLVNI-KNPDSAQTSAVHSQNITG-------LAYSYHSSPFLASISEDCTVAVLDAD 300 (357)
T ss_dssp STTEEEEEESSSC---------EEEEES-SCGGGCEEECCCSSCEEE-------EEECSSSSCCEEEEETTSCEEEECTT
T ss_pred ccceEEEeecccc---------eeEEEC-CCCcEeEEEeccceeEEE-------EEEcCCCCCEEEEEeCCCEEEEEECC
Q ss_pred eCCCCeeEEcCCCCCCCCCCeeeEEeec
Q 041767 308 KGGGGEWRWIDGLPGIGDGPCRGFVYEA 335 (341)
Q Consensus 308 ~~~~~~W~~~~~~~~~~~~~~~~~~~~p 335 (341)
+.+-...-.. .+.+.+++|.|
T Consensus 301 ---~~~~~~~~~H----~~~V~~vafsP 321 (357)
T 4g56_B 301 ---FSEVFRDLSH----RDFVTGVAWSP 321 (357)
T ss_dssp ---SCEEEEECCC----SSCEEEEEECS
T ss_pred ---CCcEeEECCC----CCCEEEEEEeC
No 98
>3vl1_A 26S proteasome regulatory subunit RPN14; beta-propeller, chaperone, RPT6; 1.60A {Saccharomyces cerevisiae} PDB: 3acp_A
Probab=41.38 E-value=1.7e+02 Score=25.13 Aligned_cols=63 Identities=6% Similarity=0.025 Sum_probs=35.5
Q ss_pred cCCEEEEecCCCCCCCCCceEEEEcCcccceecCCCCCCCCceeEEEEEcCCCcEEEEc---CeEEEEEcCCCc
Q 041767 80 SPGLIYLWGDLPDSPESNKSLIACNPLTRLYRVLPQLGSAWSKHGSVLVDSLNKVMVLT---ELAALFFSNSNH 150 (341)
Q Consensus 80 ~~glv~~~g~~~~~~~~~~~~~v~nP~t~~w~~lp~~~~~~~~~~~~~~~~~~ki~~~g---~~~evYd~~t~~ 150 (341)
.+|-+++.++. .+.+.+||..+++-...-.-... ....+...++++.++.+ +.+.+||..+.+
T Consensus 107 ~~~~~l~~~~~------dg~i~iwd~~~~~~~~~~~~h~~--~v~~~~~~~~~~~l~s~s~d~~i~iwd~~~~~ 172 (420)
T 3vl1_A 107 LQMRRFILGTT------EGDIKVLDSNFNLQREIDQAHVS--EITKLKFFPSGEALISSSQDMQLKIWSVKDGS 172 (420)
T ss_dssp SSSCEEEEEET------TSCEEEECTTSCEEEEETTSSSS--CEEEEEECTTSSEEEEEETTSEEEEEETTTCC
T ss_pred cCCCEEEEEEC------CCCEEEEeCCCcceeeecccccC--ccEEEEECCCCCEEEEEeCCCeEEEEeCCCCc
Confidence 35555555543 56799999887765543211111 11122334456655554 579999987654
No 99
>3mmy_A MRNA export factor; mRNA export, nuclear protein; HET: MES; 1.65A {Homo sapiens}
Probab=41.23 E-value=1.5e+02 Score=24.57 Aligned_cols=66 Identities=9% Similarity=-0.031 Sum_probs=34.1
Q ss_pred CEEEEecCCCCCCCCCceEEEEcCcccceecCCCCCCCCceeEEEEEcCCCcEEEEc---CeEEEEEcCCCcccc
Q 041767 82 GLIYLWGDLPDSPESNKSLIACNPLTRLYRVLPQLGSAWSKHGSVLVDSLNKVMVLT---ELAALFFSNSNHWLK 153 (341)
Q Consensus 82 glv~~~g~~~~~~~~~~~~~v~nP~t~~w~~lp~~~~~~~~~~~~~~~~~~ki~~~g---~~~evYd~~t~~W~~ 153 (341)
|.+++.++. ...+.+||..+........+.........+...++++.++.+ +.+.+||..++.-..
T Consensus 54 g~~l~~~~~------dg~i~iw~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~ 122 (368)
T 3mmy_A 54 GNFLIAGSW------ANDVRCWEVQDSGQTIPKAQQMHTGPVLDVCWSDDGSKVFTASCDKTAKMWDLSSNQAIQ 122 (368)
T ss_dssp SEEEEEEET------TSEEEEEEECTTSCEEEEEEEECSSCEEEEEECTTSSEEEEEETTSEEEEEETTTTEEEE
T ss_pred ceEEEEECC------CCcEEEEEcCCCCceeEEEeccccCCEEEEEECcCCCEEEEEcCCCcEEEEEcCCCCcee
Confidence 455556554 567889988763322111111000011122233456555554 579999998876544
No 100
>1nir_A Nitrite reductase; hemoprotein, denitrification, domain swapping; HET: HEC DHE; 2.15A {Pseudomonas aeruginosa} SCOP: a.3.1.2 b.70.2.1 PDB: 1bl9_A* 1n15_A* 1n50_A* 1n90_A* 1gjq_A* 1nno_A* 1hzv_A* 1hzu_A*
Probab=40.29 E-value=2.2e+02 Score=26.19 Aligned_cols=62 Identities=10% Similarity=0.005 Sum_probs=37.8
Q ss_pred cCCEEEEecCCCCCCCCCceEEEEcCcccceecCCCCCCCCceeEEEEEcCCC-cEEEEc--CeEEEEEc--CCCc
Q 041767 80 SPGLIYLWGDLPDSPESNKSLIACNPLTRLYRVLPQLGSAWSKHGSVLVDSLN-KVMVLT--ELAALFFS--NSNH 150 (341)
Q Consensus 80 ~~glv~~~g~~~~~~~~~~~~~v~nP~t~~w~~lp~~~~~~~~~~~~~~~~~~-ki~~~g--~~~evYd~--~t~~ 150 (341)
-+|.+++.+.. ...+.++|+.|++....-+.... -+ .+..++++ .+|+.+ +.+.+||. .+.+
T Consensus 147 p~~~~~vs~~~------d~~V~v~D~~t~~~~~~i~~g~~--~~-~v~~spdg~~l~v~~~d~~V~v~D~~~~t~~ 213 (543)
T 1nir_A 147 LPNLFSVTLRD------AGQIALVDGDSKKIVKVIDTGYA--VH-ISRMSASGRYLLVIGRDARIDMIDLWAKEPT 213 (543)
T ss_dssp GGGEEEEEEGG------GTEEEEEETTTCCEEEEEECSTT--EE-EEEECTTSCEEEEEETTSEEEEEETTSSSCE
T ss_pred CCCEEEEEEcC------CCeEEEEECCCceEEEEEecCcc--cc-eEEECCCCCEEEEECCCCeEEEEECcCCCCc
Confidence 46788877654 57899999998875432111111 22 33344555 566654 57999999 5543
No 101
>4gga_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; 2.04A {Homo sapiens} PDB: 4ggd_A
Probab=40.01 E-value=85 Score=27.54 Aligned_cols=54 Identities=11% Similarity=-0.029 Sum_probs=33.0
Q ss_pred CceEEEEcCcccceecCCCCCCCCceeEEEEEcCCCcEEEEc---CeEEEEEcCCCc
Q 041767 97 NKSLIACNPLTRLYRVLPQLGSAWSKHGSVLVDSLNKVMVLT---ELAALFFSNSNH 150 (341)
Q Consensus 97 ~~~~~v~nP~t~~w~~lp~~~~~~~~~~~~~~~~~~ki~~~g---~~~evYd~~t~~ 150 (341)
.+.+.+||..|++...+-.+......-..+...++++.+++| +.+.+||.++++
T Consensus 124 d~tV~lWd~~tg~~~~~~~~~~~~~~V~sv~fspdg~~lasgs~Dg~v~iWd~~~~~ 180 (420)
T 4gga_A 124 DNSVYLWSASSGDILQLLQMEQPGEYISSVAWIKEGNYLAVGTSSAEVQLWDVQQQK 180 (420)
T ss_dssp TTEEEEEETTTCCEEEEEECCSTTCCEEEEEECTTSSEEEEEETTSCEEEEETTTTE
T ss_pred CCEEEEEECCCCCEEEEEEecCCCCcEEEEEECCCCCEEEEEECCCeEEEEEcCCCc
Confidence 468999999999876543332111111122334566777665 478899987764
No 102
>1k8k_C P40, ARP2/3 complex 41 kDa subunit, P41-ARC; beta-propeller, structural protein; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1tyq_C* 1u2v_C* 2p9i_C* 2p9k_C* 2p9l_C 2p9n_C* 2p9p_C* 2p9s_C* 2p9u_C* 3rse_C 3dxm_C* 3dxk_C
Probab=39.23 E-value=1.7e+02 Score=24.48 Aligned_cols=68 Identities=9% Similarity=-0.043 Sum_probs=38.8
Q ss_pred CCEEEEecCCCCCCCCCceEEEEcCcccceecCCCCCCCCceeEEEEEcCCCcEEEEc---CeEEEEEcCCCccccc
Q 041767 81 PGLIYLWGDLPDSPESNKSLIACNPLTRLYRVLPQLGSAWSKHGSVLVDSLNKVMVLT---ELAALFFSNSNHWLKF 154 (341)
Q Consensus 81 ~glv~~~g~~~~~~~~~~~~~v~nP~t~~w~~lp~~~~~~~~~~~~~~~~~~ki~~~g---~~~evYd~~t~~W~~~ 154 (341)
+|-+++.++. .+.+.+||..++++..+..+.........+...++++.++.+ +.+.+||..++.+...
T Consensus 19 ~~~~l~~~~~------d~~v~i~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~ 89 (372)
T 1k8k_C 19 DRTQIAICPN------NHEVHIYEKSGNKWVQVHELKEHNGQVTGVDWAPDSNRIVTCGTDRNAYVWTLKGRTWKPT 89 (372)
T ss_dssp TSSEEEEECS------SSEEEEEEEETTEEEEEEEEECCSSCEEEEEEETTTTEEEEEETTSCEEEEEEETTEEEEE
T ss_pred CCCEEEEEeC------CCEEEEEeCCCCcEEeeeeecCCCCcccEEEEeCCCCEEEEEcCCCeEEEEECCCCeeeee
Confidence 4544445443 568999999888755443332111111122233456655554 4799999988877554
No 103
>3ott_A Two-component system sensor histidine kinase; beta-propeller, beta-sandwich, transcription; HET: TBR; 2.30A {Bacteroides thetaiotaomicron} PDB: 3va6_A
Probab=37.37 E-value=2.5e+02 Score=27.05 Aligned_cols=58 Identities=17% Similarity=-0.031 Sum_probs=36.7
Q ss_pred CceEEEEcCcccceecCCCCCCC-CceeEEEEEcCCCcEEEEc-CeEEEEEcCCCccccc
Q 041767 97 NKSLIACNPLTRLYRVLPQLGSA-WSKHGSVLVDSLNKVMVLT-ELAALFFSNSNHWLKF 154 (341)
Q Consensus 97 ~~~~~v~nP~t~~w~~lp~~~~~-~~~~~~~~~~~~~ki~~~g-~~~evYd~~t~~W~~~ 154 (341)
...+.++||.+++++.+..-... ......++.|.++.|.+.+ +.+.+||+++++.+..
T Consensus 492 ~~Gl~~~d~~~~~~~~~~~~~~~~~~~~~~i~~d~~g~lWigt~~Gl~~~~~~~~~~~~~ 551 (758)
T 3ott_A 492 NKGIDKINPRTREVTKLFADELTGEKSPNYLLCDEDGLLWVGFHGGVMRINPKDESQQSI 551 (758)
T ss_dssp CSSEEEEETTTTEEEEECTTTSCGGGCEEEEEECTTSCEEEEETTEEEEECC--CCCCBC
T ss_pred CCCcEEEeCCCCceEEecCCCcCCCcccceEEECCCCCEEEEecCceEEEecCCCceEEe
Confidence 35689999999998876421111 1112244566677888754 4689999999888765
No 104
>3v65_B Low-density lipoprotein receptor-related protein; laminin-G, beta-propeller, protein binding; 3.30A {Rattus norvegicus}
Probab=36.81 E-value=2.1e+02 Score=24.91 Aligned_cols=182 Identities=13% Similarity=0.057 Sum_probs=88.2
Q ss_pred cCCEEEEecCCCCCCCCCceEEEEcCcccceecCCCCCCCCceeEEEEEc-CCCcEEEEc---CeEEEEEcCCCcccccc
Q 041767 80 SPGLIYLWGDLPDSPESNKSLIACNPLTRLYRVLPQLGSAWSKHGSVLVD-SLNKVMVLT---ELAALFFSNSNHWLKFS 155 (341)
Q Consensus 80 ~~glv~~~g~~~~~~~~~~~~~v~nP~t~~w~~lp~~~~~~~~~~~~~~~-~~~ki~~~g---~~~evYd~~t~~W~~~~ 155 (341)
.+|.||+.... ...++++++.+.....+...... ....++++ .+++||+.. +.+++++.....-+.+.
T Consensus 126 ~~~~ly~~D~~------~~~I~r~~~~g~~~~~~~~~~~~--~p~glavd~~~g~lY~~d~~~~~I~~~~~dg~~~~~l~ 197 (386)
T 3v65_B 126 RRELVFWSDVT------LDRILRANLNGSNVEEVVSTGLE--SPGGLAVDWVHDKLYWTDSGTSRIEVANLDGAHRKVLL 197 (386)
T ss_dssp TTTEEEEEETT------TTEEEEEETTSCCEEEEECSSCS--CCCCEEEETTTTEEEEEETTTTEEEECBTTSCSCEEEE
T ss_pred CCCeEEEEeCC------CCcEEEEecCCCCcEEEEeCCCC--CccEEEEEeCCCeEEEEcCCCCeEEEEeCCCCceEEee
Confidence 47888888643 56899999988765544221111 11233344 367888874 46788777644322221
Q ss_pred ccCCCCCCCcccccCceEEEe-ecCCCcCCcceeeEeecccCCCCceeEEEcccccccccc-cccCCccEEEE--eCCEE
Q 041767 156 SNLPSKPRSPILMLNSVYALC-DVGSPWRSQWKLFCCNLSSLTNSQQFWHCLERREWGDVF-DILKRPRLVRG--VGNRI 231 (341)
Q Consensus 156 ~~~p~~~r~~~~~~~~~y~~~-~~G~~~~~~~~~~~~~~~~~~~~~v~~yD~~~~~W~~~~-~~~~~~~lv~~--~~g~l 231 (341)
. . ....+ ..+ ++. .+| .+|.... .....|..+|+....=+.+. ..+..|.-+++ .+++|
T Consensus 198 ~--~-~l~~P----~gi-avdp~~g--------~ly~td~-~~~~~I~r~~~dG~~~~~~~~~~~~~PnGlavd~~~~~l 260 (386)
T 3v65_B 198 W--Q-SLEKP----RAI-ALHPMEG--------TIYWTDW-GNTPRIEASSMDGSGRRIIADTHLFWPNGLTIDYAGRRM 260 (386)
T ss_dssp C--S-SCSCE----EEE-EEETTTT--------EEEEEEC-SSSCEEEEEETTSCSCEEEECSSCSCEEEEEEEGGGTEE
T ss_pred c--C-CCCCC----cEE-EEEcCCC--------eEEEecc-CCCCEEEEEeCCCCCcEEEEECCCCCeeeEEEeCCCCEE
Confidence 1 0 00011 011 111 112 1222111 11135788888753222221 22333444443 37899
Q ss_pred EEEEeeccccccccccceEEEEEEeCCCCcEEEec--cCCHHHHHhhcCCCceEEEecCCEEEEEEcccCcEEEEEee
Q 041767 232 LMIGGLKSSFTLNASCSTILILRLDLDLLEWEEAG--RMPVEMYRCFSESSKFKVFGMGDKVCFSAKRVGRLALWECE 307 (341)
Q Consensus 232 ~vvgg~~~~~~~~~~~~~~~vw~~d~~~~~W~~~~--~mp~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~v~~yD~~ 307 (341)
|++..... .|+++|.++..=+.+. .++.+ ..+...++.||+.....+.|..+|..
T Consensus 261 Y~aD~~~~-----------~I~~~d~dG~~~~~~~~~~~~~P----------~giav~~~~ly~td~~~~~V~~~~~~ 317 (386)
T 3v65_B 261 YWVDAKHH-----------VIERANLDGSHRKAVISQGLPHP----------FAITVFEDSLYWTDWHTKSINSANKF 317 (386)
T ss_dssp EEEETTTT-----------EEEEECTTSCSCEEEECSSCSSE----------EEEEEETTEEEEEETTTTEEEEEETT
T ss_pred EEEECCCC-----------EEEEEeCCCCeeEEEEECCCCCc----------eEEEEECCEEEEeeCCCCeEEEEECC
Confidence 98863221 3566665432222222 12111 12222567888877666778888854
No 105
>2ovr_B FBW7, F-BOX/WD repeat protein 7, F-box PROT; WD40 domains, double phosphorylation, transcription-C complex; HET: TPO; 2.50A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1 PDB: 2ovp_B* 2ovq_B*
Probab=36.41 E-value=2.2e+02 Score=24.91 Aligned_cols=20 Identities=5% Similarity=0.268 Sum_probs=16.3
Q ss_pred cccccccccccccCChhhHH
Q 041767 2 ICRSVCKLFNQILTSSSFIH 21 (341)
Q Consensus 2 r~r~VcK~W~~li~s~~F~~ 21 (341)
|+..|||+|+.++.++.+-.
T Consensus 41 ~~~~v~~~~~~~~~~~~~w~ 60 (445)
T 2ovr_B 41 QAAQTCRYWRILAEDNLLWR 60 (445)
T ss_dssp HHTTSCHHHHHHHTCSHHHH
T ss_pred HHHHHhHHHHhhcCchhHhh
Confidence 67899999999998876543
No 106
>3fm0_A Protein CIAO1; WDR39,SGC,WD40,CIAO1, nucleus, WD repeat, biosynthetic prote structural genomics, structural genomics consortium; 1.70A {Homo sapiens}
Probab=36.15 E-value=2e+02 Score=24.29 Aligned_cols=116 Identities=13% Similarity=0.170 Sum_probs=54.6
Q ss_pred ceeEEEccccccccccccc---CCccEEEE-eCCEEEEEEeeccccccccccceEEEEEEeCCCCcEEEeccCCHHHHHh
Q 041767 200 QQFWHCLERREWGDVFDIL---KRPRLVRG-VGNRILMIGGLKSSFTLNASCSTILILRLDLDLLEWEEAGRMPVEMYRC 275 (341)
Q Consensus 200 ~v~~yD~~~~~W~~~~~~~---~~~~lv~~-~~g~l~vvgg~~~~~~~~~~~~~~~vw~~d~~~~~W~~~~~mp~~~~~~ 275 (341)
.+..+|...+.+..+.... .....+.+ -+|++++.|+.+. ++.+|.++.. ..+..+..+...
T Consensus 84 ~v~iw~~~~~~~~~~~~~~~h~~~v~~v~~sp~~~~l~s~s~D~---------~v~iwd~~~~-~~~~~~~~~~~h---- 149 (345)
T 3fm0_A 84 TTCIWKKNQDDFECVTTLEGHENEVKSVAWAPSGNLLATCSRDK---------SVWVWEVDEE-DEYECVSVLNSH---- 149 (345)
T ss_dssp CEEEEEECCC-EEEEEEECCCSSCEEEEEECTTSSEEEEEETTS---------CEEEEEECTT-SCEEEEEEECCC----
T ss_pred cEEEEEccCCCeEEEEEccCCCCCceEEEEeCCCCEEEEEECCC---------eEEEEECCCC-CCeEEEEEecCc----
Confidence 5677887776554332111 11112222 2456666665432 4789988643 334433322110
Q ss_pred hcCCCceEEEe-c-CCEEEEEEcccCcEEEEEeeeCCCCeeEEcCCCCCCCCCCeeeEEeecc
Q 041767 276 FSESSKFKVFG-M-GDKVCFSAKRVGRLALWECEKGGGGEWRWIDGLPGIGDGPCRGFVYEAS 336 (341)
Q Consensus 276 ~~~~~~~~~~~-~-~~~i~~~~~~~~~v~~yD~~~~~~~~W~~~~~~~~~~~~~~~~~~~~p~ 336 (341)
...+..+. . .+.+.+.+...+.+.+||.. +.+|..+..+.. -.+.+..+.|.|.
T Consensus 150 ---~~~v~~~~~~p~~~~l~s~s~d~~i~~w~~~---~~~~~~~~~~~~-h~~~v~~l~~sp~ 205 (345)
T 3fm0_A 150 ---TQDVKHVVWHPSQELLASASYDDTVKLYREE---EDDWVCCATLEG-HESTVWSLAFDPS 205 (345)
T ss_dssp ---CSCEEEEEECSSSSCEEEEETTSCEEEEEEE---TTEEEEEEEECC-CSSCEEEEEECTT
T ss_pred ---CCCeEEEEECCCCCEEEEEeCCCcEEEEEec---CCCEEEEEEecC-CCCceEEEEECCC
Confidence 11122222 1 22233333334678899999 777764333221 1235666777664
No 107
>2ojh_A Uncharacterized protein ATU1656/AGR_C_3050; TOLB, 6-stranded beta-propeller, structural genomics, PSI-2; 1.85A {Agrobacterium tumefaciens str}
Probab=35.99 E-value=1.6e+02 Score=23.33 Aligned_cols=56 Identities=20% Similarity=-0.005 Sum_probs=34.8
Q ss_pred CceEEEEcCcccceecCCCCCCCCceeEEEEEcCCCcEEEEc--CeEEEEEcCC-Ccccccc
Q 041767 97 NKSLIACNPLTRLYRVLPQLGSAWSKHGSVLVDSLNKVMVLT--ELAALFFSNS-NHWLKFS 155 (341)
Q Consensus 97 ~~~~~v~nP~t~~w~~lp~~~~~~~~~~~~~~~~~~ki~~~g--~~~evYd~~t-~~W~~~~ 155 (341)
...+.++|+.+++.+.+..... ....+...++++.++.+ +.+.+||..+ +....+.
T Consensus 21 ~~~i~~~d~~~~~~~~~~~~~~---~v~~~~~spdg~~l~~~~~~~i~~~d~~~~~~~~~~~ 79 (297)
T 2ojh_A 21 RSSIEIFNIRTRKMRVVWQTPE---LFEAPNWSPDGKYLLLNSEGLLYRLSLAGDPSPEKVD 79 (297)
T ss_dssp CEEEEEEETTTTEEEEEEEESS---CCEEEEECTTSSEEEEEETTEEEEEESSSCCSCEECC
T ss_pred ceeEEEEeCCCCceeeeccCCc---ceEeeEECCCCCEEEEEcCCeEEEEeCCCCCCceEec
Confidence 5789999999988775543211 11123334566655443 5789999988 7665543
No 108
>3azo_A Aminopeptidase; POP family, hydrolase; 2.00A {Streptomyces morookaensis} PDB: 3azp_A 3azq_A
Probab=35.54 E-value=2.8e+02 Score=25.86 Aligned_cols=150 Identities=11% Similarity=-0.068 Sum_probs=72.3
Q ss_pred CceEEEEcCc-cc---ceecCCCCCCCCceeEEEEEcCCCcEEEEc---C--eEEEEEcCCCccccccccCCCCCCCccc
Q 041767 97 NKSLIACNPL-TR---LYRVLPQLGSAWSKHGSVLVDSLNKVMVLT---E--LAALFFSNSNHWLKFSSNLPSKPRSPIL 167 (341)
Q Consensus 97 ~~~~~v~nP~-t~---~w~~lp~~~~~~~~~~~~~~~~~~ki~~~g---~--~~evYd~~t~~W~~~~~~~p~~~r~~~~ 167 (341)
...++++|.. ++ +.+.+..-. ..........+++++++++ + .+.++|..++.++.+.. .......+..
T Consensus 216 ~~~i~~~d~~~~g~~~~~~~l~~~~--~~~~~~~~~spdg~l~~~~~~~~~~~l~~~~~~~~~~~~l~~-~~~~~~~p~w 292 (662)
T 3azo_A 216 GTELKTARVTEDGRFADTRTLLGGP--EEAIAQAEWAPDGSLIVATDRTGWWNLHRVDPATGAATQLCR-REEEFAGPLW 292 (662)
T ss_dssp CEEEEEEEECTTSCEEEEEEEEEET--TBCEEEEEECTTSCEEEEECTTSSCEEEEECTTTCCEEESSC-CSSBSSCCCC
T ss_pred CcEEEEEEECCCCcccccEEeCCCC--CceEcceEECCCCeEEEEECCCCCeEEEEEECCCCceeeccc-ccccccCccc
Confidence 3689999998 56 444443211 0111122233566777665 2 57788887888876642 2211100000
Q ss_pred cc-CceEEEeecCCCcCCcceeeEeecccCCCCceeEEEcccccccccccccCCccEE-EEeCCEEEEEEeecccccccc
Q 041767 168 ML-NSVYALCDVGSPWRSQWKLFCCNLSSLTNSQQFWHCLERREWGDVFDILKRPRLV-RGVGNRILMIGGLKSSFTLNA 245 (341)
Q Consensus 168 ~~-~~~y~~~~~G~~~~~~~~~~~~~~~~~~~~~v~~yD~~~~~W~~~~~~~~~~~lv-~~~~g~l~vvgg~~~~~~~~~ 245 (341)
.. ...+.+..+|. +++.. .. ....+..+|+..++.+.+.........+ ...+++++++.....
T Consensus 293 ~~~~~~~~~~~~~~-------~~~~~-~~-~~~~l~~~d~~~~~~~~l~~~~~~~~~~~s~~~~~~~~~~~~~~------ 357 (662)
T 3azo_A 293 TPGMRWFAPLANGL-------IAVVH-GK-GAAVLGILDPESGELVDAAGPWTEWAATLTVSGTRAVGVAASPR------ 357 (662)
T ss_dssp STTCCSEEECTTSC-------EEEEE-BS-SSCEEEEEETTTTEEEECCSSCCEEEEEEEEETTEEEEEEEETT------
T ss_pred cccCceEeEeCCCE-------EEEEE-Ec-CccEEEEEECCCCcEEEecCCCCeEEEEEecCCCEEEEEEcCCC------
Confidence 00 11122322231 12221 11 2234666788766655553111111122 334667776654322
Q ss_pred ccceEEEEEEeCCCCcEEEec
Q 041767 246 SCSTILILRLDLDLLEWEEAG 266 (341)
Q Consensus 246 ~~~~~~vw~~d~~~~~W~~~~ 266 (341)
...+||.+|..+.+.+.+.
T Consensus 358 --~~~~i~~~d~~~g~~~~l~ 376 (662)
T 3azo_A 358 --TAYEVVELDTVTGRARTIG 376 (662)
T ss_dssp --EEEEEEEEETTTCCEEEEE
T ss_pred --CCCEEEEEECCCCceEEee
Confidence 2357888888777777764
No 109
>2ast_B S-phase kinase-associated protein 2; SCF-substrate complex, LRR, cell cycle, protein turnover COM ligase-ligase inhibitor complex; HET: TPO; 2.30A {Homo sapiens} SCOP: a.158.1.1 c.10.1.3 PDB: 2ass_B 1fqv_A* 1fs2_A
Probab=34.89 E-value=6.6 Score=33.82 Aligned_cols=17 Identities=24% Similarity=0.466 Sum_probs=14.9
Q ss_pred cccccccccccccCChh
Q 041767 2 ICRSVCKLFNQILTSSS 18 (341)
Q Consensus 2 r~r~VcK~W~~li~s~~ 18 (341)
+++.|||+|+.++.+|.
T Consensus 31 ~~~~vc~~W~~~~~~~~ 47 (336)
T 2ast_B 31 KVSGVCKRWYRLASDES 47 (336)
T ss_dssp HTTSSCHHHHHHHTCST
T ss_pred HHHHHHHHHHHHhcCch
Confidence 67899999999998775
No 110
>3no2_A Uncharacterized protein; six-bladed beta-propeller, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE CIT PEG; 1.35A {Bacteroides caccae}
Probab=34.32 E-value=1.9e+02 Score=23.70 Aligned_cols=191 Identities=9% Similarity=-0.017 Sum_probs=0.0
Q ss_pred eccCCEEEEecCCCCCCCCCceEEEEcCcccceecCCCCCCCCceeEEEEEcCCCcEEEEc-CeEEEEEcCCCc--cccc
Q 041767 78 ASSPGLIYLWGDLPDSPESNKSLIACNPLTRLYRVLPQLGSAWSKHGSVLVDSLNKVMVLT-ELAALFFSNSNH--WLKF 154 (341)
Q Consensus 78 ~~~~glv~~~g~~~~~~~~~~~~~v~nP~t~~w~~lp~~~~~~~~~~~~~~~~~~ki~~~g-~~~evYd~~t~~--W~~~ 154 (341)
++.-|-+++.+.. ...+.++|+.|++-..--+.......+...+. +++++++.+ +.+..||+ +++ |+.-
T Consensus 1 ~~~~~~~lv~~~~------~~~v~~~d~~tG~~~w~~~~~~~~~~~~~~~~-pdG~ilvs~~~~V~~~d~-~G~~~W~~~ 72 (276)
T 3no2_A 1 GSSPQHLLVGGSG------WNKIAIINKDTKEIVWEYPLEKGWECNSVAAT-KAGEILFSYSKGAKMITR-DGRELWNIA 72 (276)
T ss_dssp --CCCEEEEECTT------CSEEEEEETTTTEEEEEEECCTTCCCCEEEEC-TTSCEEEECBSEEEEECT-TSCEEEEEE
T ss_pred CCCCCcEEEeeCC------CCEEEEEECCCCeEEEEeCCCccCCCcCeEEC-CCCCEEEeCCCCEEEECC-CCCEEEEEc
Q ss_pred cccCCCCCCCcccccCceEEEeecC-CCcCCcceeeEeecccCCCCceeEEEcccccccccc-------cccCCccEEEE
Q 041767 155 SSNLPSKPRSPILMLNSVYALCDVG-SPWRSQWKLFCCNLSSLTNSQQFWHCLERREWGDVF-------DILKRPRLVRG 226 (341)
Q Consensus 155 ~~~~p~~~r~~~~~~~~~y~~~~~G-~~~~~~~~~~~~~~~~~~~~~v~~yD~~~~~W~~~~-------~~~~~~~lv~~ 226 (341)
.. ............+.-++++..+ . ..+..+|+.-+.=..+. .......+...
T Consensus 73 ~~-~~~~~~~~~~~~dG~~lv~~~~~~------------------~~v~~vd~~Gk~l~~~~~~~~~~~~~~~~~~v~~~ 133 (276)
T 3no2_A 73 AP-AGCEMQTARILPDGNALVAWCGHP------------------STILEVNMKGEVLSKTEFETGIERPHAQFRQINKN 133 (276)
T ss_dssp CC-TTCEEEEEEECTTSCEEEEEESTT------------------EEEEEECTTSCEEEEEEECCSCSSGGGSCSCCEEC
T ss_pred CC-CCccccccEECCCCCEEEEecCCC------------------CEEEEEeCCCCEEEEEeccCCCCcccccccCceEC
Q ss_pred eCCEEEEEEeeccccccccccceEEEEEEeCCCCcEEEeccCCHHHHHhhcCCCceEEEecCCEEEEEEcccCcEEEEEe
Q 041767 227 VGNRILMIGGLKSSFTLNASCSTILILRLDLDLLEWEEAGRMPVEMYRCFSESSKFKVFGMGDKVCFSAKRVGRLALWEC 306 (341)
Q Consensus 227 ~~g~l~vvgg~~~~~~~~~~~~~~~vw~~d~~~~~W~~~~~mp~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~v~~yD~ 306 (341)
.+|.++++...... +.+|..+ .+..|+.-.. ..........++.+++.......+..+|+
T Consensus 134 ~~G~~lv~~~~~~~---------v~~~d~~-G~~~w~~~~~----------~~~~~~~~~~~g~~~v~~~~~~~v~~~d~ 193 (276)
T 3no2_A 134 KKGNYLVPLFATSE---------VREIAPN-GQLLNSVKLS----------GTPFSSAFLDNGDCLVACGDAHCFVQLNL 193 (276)
T ss_dssp TTSCEEEEETTTTE---------EEEECTT-SCEEEEEECS----------SCCCEEEECTTSCEEEECBTTSEEEEECT
T ss_pred CCCCEEEEecCCCE---------EEEECCC-CCEEEEEECC----------CCccceeEcCCCCEEEEeCCCCeEEEEeC
Q ss_pred eeCCCCeeEE
Q 041767 307 EKGGGGEWRW 316 (341)
Q Consensus 307 ~~~~~~~W~~ 316 (341)
.++ +-.|+.
T Consensus 194 ~tG-~~~w~~ 202 (276)
T 3no2_A 194 ESN-RIVRRV 202 (276)
T ss_dssp TTC-CEEEEE
T ss_pred cCC-cEEEEe
No 111
>3l2o_B F-box only protein 4; small G protein fold, UBL conjugation pathway, ubiquitin Pro ligase, protein binding-cell cycle complex; 2.80A {Homo sapiens}
Probab=34.19 E-value=8 Score=33.23 Aligned_cols=25 Identities=8% Similarity=0.078 Sum_probs=19.8
Q ss_pred cccccccccccccCChhhHHHHhcC
Q 041767 2 ICRSVCKLFNQILTSSSFIHLISTQ 26 (341)
Q Consensus 2 r~r~VcK~W~~li~s~~F~~~~~~~ 26 (341)
|+-+|||+|+.+.+++..=..+..+
T Consensus 27 ~l~~vcr~Wr~la~D~~LWr~~l~r 51 (312)
T 3l2o_B 27 QLGSTNHYWNETVRDPILWRYFLLR 51 (312)
T ss_dssp HHHTTCHHHHHHHTCHHHHHHHHHS
T ss_pred HHHHHHHHHHHHhccchHHHHHHhc
Confidence 5678999999999999865555543
No 112
>3ei3_B DNA damage-binding protein 2; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Danio rerio} PDB: 3ei1_B* 3ei2_B* 4a08_B* 4a09_B* 4a0a_B* 4a0b_B* 4a0k_D* 4a0l_B*
Probab=33.99 E-value=2.2e+02 Score=24.16 Aligned_cols=193 Identities=6% Similarity=-0.100 Sum_probs=0.0
Q ss_pred eeeccCC-EEEEecCCCCCCCCCceEEEEcCcccceecCCCCCCCCceeEEEEEcC-CCcEEEEc---CeEEEEEcCCCc
Q 041767 76 PVASSPG-LIYLWGDLPDSPESNKSLIACNPLTRLYRVLPQLGSAWSKHGSVLVDS-LNKVMVLT---ELAALFFSNSNH 150 (341)
Q Consensus 76 ~~~~~~g-lv~~~g~~~~~~~~~~~~~v~nP~t~~w~~lp~~~~~~~~~~~~~~~~-~~ki~~~g---~~~evYd~~t~~ 150 (341)
+.-+-+| .+++.++. ...+.+||..+++....-...........+...+ +++.++.+ +.+.+||..++.
T Consensus 79 ~~~~~~~~~~l~s~~~------dg~i~iwd~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~ 152 (383)
T 3ei3_B 79 LEWHPTHPTTVAVGSK------GGDIILWDYDVQNKTSFIQGMGPGDAITGMKFNQFNTNQLFVSSIRGATTLRDFSGSV 152 (383)
T ss_dssp EEECSSCTTEEEEEEB------TSCEEEEETTSTTCEEEECCCSTTCBEEEEEEETTEEEEEEEEETTTEEEEEETTSCE
T ss_pred EEECCCCCCEEEEEcC------CCeEEEEeCCCcccceeeecCCcCCceeEEEeCCCCCCEEEEEeCCCEEEEEECCCCc
Q ss_pred cccccccCC---CCCCCcccccCceEEEeecCCCcCCcceeeEeecccCCCCceeEEEcccccccccccccCCccEEEEe
Q 041767 151 WLKFSSNLP---SKPRSPILMLNSVYALCDVGSPWRSQWKLFCCNLSSLTNSQQFWHCLERREWGDVFDILKRPRLVRGV 227 (341)
Q Consensus 151 W~~~~~~~p---~~~r~~~~~~~~~y~~~~~G~~~~~~~~~~~~~~~~~~~~~v~~yD~~~~~W~~~~~~~~~~~lv~~~ 227 (341)
...+.. .. .....-.+..+.-+++..+.. +.|..||+..+.-..+.........+.+.
T Consensus 153 ~~~~~~-~~~~~~~v~~~~~~~~~~~l~~~~~d------------------~~i~i~d~~~~~~~~~~~h~~~v~~~~~~ 213 (383)
T 3ei3_B 153 IQVFAK-TDSWDYWYCCVDVSVSRQMLATGDST------------------GRLLLLGLDGHEIFKEKLHKAKVTHAEFN 213 (383)
T ss_dssp EEEEEC-CCCSSCCEEEEEEETTTTEEEEEETT------------------SEEEEEETTSCEEEEEECSSSCEEEEEEC
T ss_pred eEEEec-cCCCCCCeEEEEECCCCCEEEEECCC------------------CCEEEEECCCCEEEEeccCCCcEEEEEEC
Q ss_pred CCE--EEEEEeeccccccccccceEEEEEEeCCCCcEEEeccCCHHHHHhhcCCCceEEEec---CCEEEEEEcccCcEE
Q 041767 228 GNR--ILMIGGLKSSFTLNASCSTILILRLDLDLLEWEEAGRMPVEMYRCFSESSKFKVFGM---GDKVCFSAKRVGRLA 302 (341)
Q Consensus 228 ~g~--l~vvgg~~~~~~~~~~~~~~~vw~~d~~~~~W~~~~~mp~~~~~~~~~~~~~~~~~~---~~~i~~~~~~~~~v~ 302 (341)
.+. +++.|+.+.. +.+|.+......-..+..+... ..+.++.- .+..++.+...+.+.
T Consensus 214 ~~~~~~l~s~~~d~~---------i~iwd~~~~~~~~~~~~~~~~~--------~~v~~~~~s~~~~~~l~~~~~d~~i~ 276 (383)
T 3ei3_B 214 PRCDWLMATSSVDAT---------VKLWDLRNIKDKNSYIAEMPHE--------KPVNAAYFNPTDSTKLLTTDQRNEIR 276 (383)
T ss_dssp SSCTTEEEEEETTSE---------EEEEEGGGCCSTTCEEEEEECS--------SCEEEEEECTTTSCEEEEEESSSEEE
T ss_pred CCCCCEEEEEeCCCE---------EEEEeCCCCCcccceEEEecCC--------CceEEEEEcCCCCCEEEEEcCCCcEE
Q ss_pred EEEeeeCCCCe
Q 041767 303 LWECEKGGGGE 313 (341)
Q Consensus 303 ~yD~~~~~~~~ 313 (341)
+||+. +.+
T Consensus 277 iwd~~---~~~ 284 (383)
T 3ei3_B 277 VYSSY---DWS 284 (383)
T ss_dssp EEETT---BTT
T ss_pred EEECC---CCc
No 113
>2ad6_A Methanol dehydrogenase subunit 1; PQQ configuration, native, oxidoredu; HET: PQQ; 1.50A {Methylophilus methylotrophus} SCOP: b.70.1.1 PDB: 2ad7_A* 2ad8_A* 4aah_A* 1g72_A*
Probab=33.81 E-value=2.9e+02 Score=25.65 Aligned_cols=68 Identities=9% Similarity=0.108 Sum_probs=41.4
Q ss_pred eccCCEEEEecCCCCCCCCCceEEEEcC-cccc--eecCCCCCCC-C-------ceeEEEEEcCCCcEEEEc--CeEEEE
Q 041767 78 ASSPGLIYLWGDLPDSPESNKSLIACNP-LTRL--YRVLPQLGSA-W-------SKHGSVLVDSLNKVMVLT--ELAALF 144 (341)
Q Consensus 78 ~~~~glv~~~g~~~~~~~~~~~~~v~nP-~t~~--w~~lp~~~~~-~-------~~~~~~~~~~~~ki~~~g--~~~evY 144 (341)
+..+|.||+.... ...++.+|+ .|++ |+.-++.... . ...+..+. +++||+.. +.+..+
T Consensus 59 ~v~~g~vyv~~~~------~~~v~AlD~~~tG~~~W~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~v~v~~~dg~l~al 130 (571)
T 2ad6_A 59 LVIGDMMYVHSAF------PNNTYALNLNDPGKIVWQHKPKQDASTKAVMCCDVVDRGLAYG--AGQIVKKQANGHLLAL 130 (571)
T ss_dssp EEETTEEEEECST------TTCEEEEETTCTTSEEEEECCCCCGGGGGGCTTCSCCCCCEEE--TTEEEEECTTSEEEEE
T ss_pred EEECCEEEEEeCC------CCEEEEEeCCCCccEEEEEcCCCCccccccccccccccccEEE--CCEEEEEeCCCEEEEE
Confidence 3468999988641 357899999 7766 7653322110 0 01112222 57888874 578889
Q ss_pred EcCCC--cccc
Q 041767 145 FSNSN--HWLK 153 (341)
Q Consensus 145 d~~t~--~W~~ 153 (341)
|.+++ .|+.
T Consensus 131 D~~tG~~~W~~ 141 (571)
T 2ad6_A 131 DAKTGKINWEV 141 (571)
T ss_dssp ETTTCCEEEEE
T ss_pred ECCCCCEEEEe
Confidence 98876 4875
No 114
>1jmx_B Amine dehydrogenase; oxidoreductase; HET: TRQ HEC; 1.90A {Pseudomonas putida} SCOP: b.69.2.2 PDB: 1jmz_B*
Probab=33.26 E-value=1e+02 Score=25.72 Aligned_cols=68 Identities=7% Similarity=-0.056 Sum_probs=39.9
Q ss_pred eccCCEEEEecCCCCCCCCCceEEEEcCcccceecCCCCCCCCceeEEEEEcCCC-cEEEEc---CeEEEEEcCCCccc
Q 041767 78 ASSPGLIYLWGDLPDSPESNKSLIACNPLTRLYRVLPQLGSAWSKHGSVLVDSLN-KVMVLT---ELAALFFSNSNHWL 152 (341)
Q Consensus 78 ~~~~glv~~~g~~~~~~~~~~~~~v~nP~t~~w~~lp~~~~~~~~~~~~~~~~~~-ki~~~g---~~~evYd~~t~~W~ 152 (341)
.+.++.+++.++. ...+.++|+.+++....-+.+... ....+..++++ .+|+.+ +.+.+||..+++-.
T Consensus 7 ~~~~~~~~v~~~~------~~~v~~~d~~~~~~~~~~~~~~~~-~~~~~~~s~dg~~~~v~~~~~~~i~~~d~~t~~~~ 78 (349)
T 1jmx_B 7 LKAGHEYMIVTNY------PNNLHVVDVASDTVYKSCVMPDKF-GPGTAMMAPDNRTAYVLNNHYGDIYGIDLDTCKNT 78 (349)
T ss_dssp CCTTCEEEEEEET------TTEEEEEETTTTEEEEEEECSSCC-SSCEEEECTTSSEEEEEETTTTEEEEEETTTTEEE
T ss_pred ccCCCEEEEEeCC------CCeEEEEECCCCcEEEEEecCCCC-CCceeEECCCCCEEEEEeCCCCcEEEEeCCCCcEE
Confidence 3456777777654 578999999988764321221100 11123344455 466654 47899999877643
No 115
>2pm7_B Protein transport protein SEC13, protein transport protein SEC31; beta propeller, alpha solenoid; 2.35A {Saccharomyces cerevisiae} PDB: 2pm9_B 2pm6_B 3iko_A 3mzk_A 3mzl_A
Probab=32.29 E-value=2.1e+02 Score=23.42 Aligned_cols=69 Identities=7% Similarity=0.039 Sum_probs=35.8
Q ss_pred CCEEEEecCCCCCCCCCceEEEEcCcccceecCCCCCCCCceeEEEEEcC--CCcEEEEc---CeEEEEEcCCCcccccc
Q 041767 81 PGLIYLWGDLPDSPESNKSLIACNPLTRLYRVLPQLGSAWSKHGSVLVDS--LNKVMVLT---ELAALFFSNSNHWLKFS 155 (341)
Q Consensus 81 ~glv~~~g~~~~~~~~~~~~~v~nP~t~~w~~lp~~~~~~~~~~~~~~~~--~~ki~~~g---~~~evYd~~t~~W~~~~ 155 (341)
+|-.++.++. .+.+.+||..+++.+.+..+......-..+.... .+++++.+ +.+.+||.+++.|..+.
T Consensus 20 ~g~~las~s~------D~~v~iw~~~~~~~~~~~~l~gH~~~V~~v~~s~~~~g~~l~s~s~D~~v~iWd~~~~~~~~~~ 93 (297)
T 2pm7_B 20 YGKRMATCSS------DKTIKIFEVEGETHKLIDTLTGHEGPVWRVDWAHPKFGTILASCSYDGKVMIWKEENGRWSQIA 93 (297)
T ss_dssp TSSEEEEEET------TSCEEEEEBCSSCBCCCEEECCCSSCEEEEEECCGGGCSEEEEEETTTEEEEEEBSSSCBCCCE
T ss_pred CCCEEEEEeC------CCEEEEEecCCCCcEEEEEEccccCCeEEEEecCCCcCCEEEEEcCCCEEEEEEcCCCceEEEE
Confidence 4544455543 4678888876544333222211000001122221 25666654 57999999988886654
No 116
>3q6k_A 43.2 kDa salivary protein; beta propeller, binding protein, serotonin, salivary gland, binding, ligand binging protein; HET: CIT SRO; 2.52A {Lutzomyia longipalpis} PDB: 3q6p_A* 3q6t_A*
Probab=31.93 E-value=53 Score=29.23 Aligned_cols=67 Identities=16% Similarity=0.110 Sum_probs=41.0
Q ss_pred EEEEEEeCCCC--cEEEeccCCHHHHHhhcCCCceEEE-e------cCCEEEEEEcccCcEEEEEeeeCCCCeeEEcC
Q 041767 250 ILILRLDLDLL--EWEEAGRMPVEMYRCFSESSKFKVF-G------MGDKVCFSAKRVGRLALWECEKGGGGEWRWID 318 (341)
Q Consensus 250 ~~vw~~d~~~~--~W~~~~~mp~~~~~~~~~~~~~~~~-~------~~~~i~~~~~~~~~v~~yD~~~~~~~~W~~~~ 318 (341)
-+++.+|..++ +=.+.-.+|.........-..+.+- . .+..+|+.......++|||+.+ .++|+...
T Consensus 123 pkLv~~DL~t~~~~li~~y~~p~~~~~~~S~l~di~VD~~~~~~~c~~~~aYItD~~~~gLIVydl~~--~~swRv~~ 198 (381)
T 3q6k_A 123 PAIVAYDLKQPNYPEVVRYYFPTRLVEKPTYFGGFAVDVANPKGDCSETFVYITNFLRGALFIYDHKK--QDSWNVTH 198 (381)
T ss_dssp CEEEEEESSSTTCCEEEEEECCGGGCCCGGGEEEEEEEESCTTTTSCSEEEEEEETTTTEEEEEETTT--TEEEEEEC
T ss_pred ceEEEEECCCCCceeEEEEECCHHhcccCCccceEEEecccCCCCCCccEEEEEcCCCCcEEEEECCC--CcEEEEcc
Confidence 36777788777 6666666775432211000112222 1 1457798876668899999995 57999874
No 117
>2oiz_A Aromatic amine dehydrogenase, large subunit; oxidoreductase, tryptophan tryptophyl quinone, H-tunneling; HET: TRQ TSR PG4; 1.05A {Alcaligenes faecalis} PDB: 2agw_A* 2agx_A* 2agl_A* 2agz_A* 2ah0_A* 2ah1_A* 2hj4_A* 2hjb_A* 2i0t_A* 2iup_A* 2iuq_A* 2iur_A* 2iuv_A* 2agy_A* 2ok4_A* 2ok6_A* 2iaa_A* 2h47_A* 2h3x_A* 2hkr_A* ...
Probab=31.90 E-value=1.5e+02 Score=25.46 Aligned_cols=94 Identities=9% Similarity=0.096 Sum_probs=50.1
Q ss_pred CCEEEEEEeeccccccccccceEEEEEEeCCCCcEEEeccCCHHHHHhhcCCCceEEEecCCEEEEEEcccCcEEEEEee
Q 041767 228 GNRILMIGGLKSSFTLNASCSTILILRLDLDLLEWEEAGRMPVEMYRCFSESSKFKVFGMGDKVCFSAKRVGRLALWECE 307 (341)
Q Consensus 228 ~g~l~vvgg~~~~~~~~~~~~~~~vw~~d~~~~~W~~~~~mp~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~v~~yD~~ 307 (341)
++++|+............ .....||.+|..+. +.+.+++... ...+.+.-.+..+|+.+. +.|.+||..
T Consensus 265 g~~lyv~~~~~~~~~~~~-~~~~~v~viD~~t~--~~v~~i~~~~------p~~ia~spdg~~l~v~n~--~~v~v~D~~ 333 (361)
T 2oiz_A 265 SGRMYVFMHPDGKEGTHK-FPAAEIWVMDTKTK--QRVARIPGRD------ALSMTIDQQRNLMLTLDG--GNVNVYDIS 333 (361)
T ss_dssp TTEEEEEEESSCCTTCTT-CCCSEEEEEETTTT--EEEEEEECTT------CCEEEEETTTTEEEEECS--SCEEEEECS
T ss_pred CCeEEEEEccCCCccccc-CCCceEEEEECCCC--cEEEEEecCC------eeEEEECCCCCEEEEeCC--CeEEEEECC
Confidence 578888754111000000 01125677776543 5566665432 112344445677786654 789999998
Q ss_pred eCCCCeeEEcCCCCCCCCCCeeeEEeecc
Q 041767 308 KGGGGEWRWIDGLPGIGDGPCRGFVYEAS 336 (341)
Q Consensus 308 ~~~~~~W~~~~~~~~~~~~~~~~~~~~p~ 336 (341)
+.+-+.+...+..+ ....++.|.|.
T Consensus 334 ---t~~l~~~~~i~~~G-~~P~~~~~~p~ 358 (361)
T 2oiz_A 334 ---QPEPKLLRTIEGAA-EASLQVQFHPV 358 (361)
T ss_dssp ---SSSCEEEEEETTSC-SSEEEEEECCC
T ss_pred ---CCcceeeEEeccCC-CCcEEEEecCC
Confidence 55334554432122 25778888875
No 118
>4e54_B DNA damage-binding protein 2; beta barrel, double helix, DDB1:WD40 beta-barrel fold, DNA D DNA repair, HOST-virus interactions; HET: DNA 3DR; 2.85A {Homo sapiens} PDB: 3ei4_B*
Probab=31.27 E-value=2.7e+02 Score=24.36 Aligned_cols=58 Identities=10% Similarity=-0.039 Sum_probs=31.4
Q ss_pred CceEEEEcCcccceecCCCC-CCCCceeEEEEEcC-CCcEEEEc---CeEEEEEcCCCcccccc
Q 041767 97 NKSLIACNPLTRLYRVLPQL-GSAWSKHGSVLVDS-LNKVMVLT---ELAALFFSNSNHWLKFS 155 (341)
Q Consensus 97 ~~~~~v~nP~t~~w~~lp~~-~~~~~~~~~~~~~~-~~ki~~~g---~~~evYd~~t~~W~~~~ 155 (341)
...+.+||..+++-..+-.. .....-. .+...+ +++.++.+ +.+.+||.+++.-+.+.
T Consensus 141 dg~i~lWd~~~~~~~~~~~~~gH~~~V~-~l~f~p~~~~~l~s~s~D~~v~iwd~~~~~~~~~~ 203 (435)
T 4e54_B 141 GGDIMLWNFGIKDKPTFIKGIGAGGSIT-GLKFNPLNTNQFYASSMEGTTRLQDFKGNILRVFA 203 (435)
T ss_dssp TSCEEEECSSCCSCCEEECCCSSSCCCC-EEEECSSCTTEEEEECSSSCEEEEETTSCEEEEEE
T ss_pred CCEEEEEECCCCCceeEEEccCCCCCEE-EEEEeCCCCCEEEEEeCCCEEEEeeccCCceeEEe
Confidence 56799999988765433222 1111011 222332 44555444 47999998877655443
No 119
>2pm7_B Protein transport protein SEC13, protein transport protein SEC31; beta propeller, alpha solenoid; 2.35A {Saccharomyces cerevisiae} PDB: 2pm9_B 2pm6_B 3iko_A 3mzk_A 3mzl_A
Probab=31.03 E-value=2.2e+02 Score=23.29 Aligned_cols=62 Identities=8% Similarity=0.030 Sum_probs=35.1
Q ss_pred CEEEEecCCCCCCCCCceEEEEcCcccceecCCCCCCCCceeEEEEEcCC--CcEEEEc---CeEEEEEcCCC
Q 041767 82 GLIYLWGDLPDSPESNKSLIACNPLTRLYRVLPQLGSAWSKHGSVLVDSL--NKVMVLT---ELAALFFSNSN 149 (341)
Q Consensus 82 glv~~~g~~~~~~~~~~~~~v~nP~t~~w~~lp~~~~~~~~~~~~~~~~~--~ki~~~g---~~~evYd~~t~ 149 (341)
|-+++.++. ...+.+||..+++|..+..+.........+...++ ++.++.+ +.+.+||.+++
T Consensus 67 g~~l~s~s~------D~~v~iWd~~~~~~~~~~~~~~h~~~v~~v~~~p~~~g~~l~s~s~d~~v~~wd~~~~ 133 (297)
T 2pm7_B 67 GTILASCSY------DGKVMIWKEENGRWSQIAVHAVHSASVNSVQWAPHEYGPMLLVASSDGKVSVVEFKEN 133 (297)
T ss_dssp CSEEEEEET------TTEEEEEEBSSSCBCCCEEECCCSSCEEEEEECCGGGCSEEEEEETTSEEEEEEBCSS
T ss_pred CCEEEEEcC------CCEEEEEEcCCCceEEEEEeecCCCceeEEEeCcCCCCcEEEEEECCCcEEEEEecCC
Confidence 555555554 57899999998877654432210001112223232 5555554 57899998765
No 120
>2vdu_B TRNA (guanine-N(7)-)-methyltransferase- associated WD repeat protein TRM82; S-adenosyl-L-methionine, tRNA processing, phosphorylation, M7G, spout MT, WD repeat; 2.40A {Saccharomyces cerevisiae}
Probab=29.35 E-value=2.9e+02 Score=24.20 Aligned_cols=219 Identities=10% Similarity=-0.074 Sum_probs=0.0
Q ss_pred eeccCCEEEEecCCCCCCCCCceEEEEcCc--ccceecCCCCCCCCceeEEEEEcCCCcEEEEc---CeEEEEEcCCCcc
Q 041767 77 VASSPGLIYLWGDLPDSPESNKSLIACNPL--TRLYRVLPQLGSAWSKHGSVLVDSLNKVMVLT---ELAALFFSNSNHW 151 (341)
Q Consensus 77 ~~~~~glv~~~g~~~~~~~~~~~~~v~nP~--t~~w~~lp~~~~~~~~~~~~~~~~~~ki~~~g---~~~evYd~~t~~W 151 (341)
+...+.+|++.++. ...+.+||.. +++....-...........+...++++.++++ +.+.+||..+..-
T Consensus 110 ~s~d~~~l~~~~~~------dg~v~iwd~~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~~~~~~g~v~~~~~~~~~~ 183 (450)
T 2vdu_B 110 LTSDESRLIACADS------DKSLLVFDVDKTSKNVLKLRKRFCFSKRPNAISIAEDDTTVIIADKFGDVYSIDINSIPE 183 (450)
T ss_dssp ECTTSSEEEEEEGG------GTEEEEEEECSSSSSCEEEEEEEECSSCEEEEEECTTSSEEEEEETTSEEEEEETTSCCC
T ss_pred EcCCCCEEEEEECC------CCeEEEEECcCCCCceeeeeecccCCCCceEEEEcCCCCEEEEEeCCCcEEEEecCCccc
Q ss_pred c-----cccccCCCCCCCcccccC---ceEEEeecCCCcCCcceeeEeecccCCCCceeEEEcccccccccc--cccCCc
Q 041767 152 L-----KFSSNLPSKPRSPILMLN---SVYALCDVGSPWRSQWKLFCCNLSSLTNSQQFWHCLERREWGDVF--DILKRP 221 (341)
Q Consensus 152 ~-----~~~~~~p~~~r~~~~~~~---~~y~~~~~G~~~~~~~~~~~~~~~~~~~~~v~~yD~~~~~W~~~~--~~~~~~ 221 (341)
. .+.. .......-.+..+ .-+++..+.. +.|..||+.+.+-...- ......
T Consensus 184 ~~~~~~~~~~-h~~~v~~~~~sp~~~~~~~l~s~~~d------------------~~i~vwd~~~~~~~~~~~~~h~~~v 244 (450)
T 2vdu_B 184 EKFTQEPILG-HVSMLTDVHLIKDSDGHQFIITSDRD------------------EHIKISHYPQCFIVDKWLFGHKHFV 244 (450)
T ss_dssp SSCCCCCSEE-CSSCEEEEEEEECTTSCEEEEEEETT------------------SCEEEEEESCTTCEEEECCCCSSCE
T ss_pred ccccceeeec-ccCceEEEEEcCCCCCCcEEEEEcCC------------------CcEEEEECCCCceeeeeecCCCCce
Q ss_pred cEEEEeCCEEEEEEeeccccccccccceEEEEEEeCCCCcEEEeccCCHHHH-------------------HhhcCCCce
Q 041767 222 RLVRGVGNRILMIGGLKSSFTLNASCSTILILRLDLDLLEWEEAGRMPVEMY-------------------RCFSESSKF 282 (341)
Q Consensus 222 ~lv~~~~g~l~vvgg~~~~~~~~~~~~~~~vw~~d~~~~~W~~~~~mp~~~~-------------------~~~~~~~~~ 282 (341)
..+.+.+|++++.|+.+.. +.|| |..+.+-.....+..... ..-.....+
T Consensus 245 ~~~~~sd~~~l~s~~~d~~---------v~vw--d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i 313 (450)
T 2vdu_B 245 SSICCGKDYLLLSAGGDDK---------IFAW--DWKTGKNLSTFDYNSLIKPYLNDQHLAPPRFQNENNDIIEFAVSKI 313 (450)
T ss_dssp EEEEECSTTEEEEEESSSE---------EEEE--ETTTCCEEEEEECHHHHGGGCCTTSBC----------CBCCCEEEE
T ss_pred EEEEECCCCEEEEEeCCCe---------EEEE--ECCCCcEeeeecchhhhhhhhhhcccccccccccccccceEEEEEE
Q ss_pred EEEecCCEEEEEEcccCcEEEEEe--eeCCCCeeEEcCCCCCCCCCCeeeEEeec
Q 041767 283 KVFGMGDKVCFSAKRVGRLALWEC--EKGGGGEWRWIDGLPGIGDGPCRGFVYEA 335 (341)
Q Consensus 283 ~~~~~~~~i~~~~~~~~~v~~yD~--~~~~~~~W~~~~~~~~~~~~~~~~~~~~p 335 (341)
.....+..+++.....+.+.+||+ .+ ..+++.+..++.. +.+..+.|.|
T Consensus 314 ~~~~~~~~l~~~~~~d~~i~iw~~~~~~--~~~l~~~~~~~~~--~~v~~~~~~~ 364 (450)
T 2vdu_B 314 IKSKNLPFVAFFVEATKCIIILEMSEKQ--KGDLALKQIITFP--YNVISLSAHN 364 (450)
T ss_dssp EECSSSSEEEEEETTCSEEEEEEECSSS--TTCEEEEEEEECS--SCEEEEEEET
T ss_pred EEeCCCCEEEEEECCCCeEEEEEeccCC--CCceeeccEeccC--CceEEEEecC
No 121
>2hqs_A Protein TOLB; TOLB, PAL, TOL, transport protein-lipoprotein complex; 1.50A {Escherichia coli} SCOP: b.68.4.1 c.51.2.1 PDB: 3iax_A 1c5k_A 2ivz_A 2w8b_B 2w8b_A 1crz_A
Probab=28.79 E-value=2.9e+02 Score=24.08 Aligned_cols=241 Identities=10% Similarity=-0.021 Sum_probs=109.3
Q ss_pred ceEEEeeCCCCcEEEeeCCCCCCCCcceeeccCC-EEEEecCCCCCCCCCceEEEEcCcccceecCCCCCCCCceeEEEE
Q 041767 49 AALHVYDPNQNQWLRFDLSFLPFRSLHPVASSPG-LIYLWGDLPDSPESNKSLIACNPLTRLYRVLPQLGSAWSKHGSVL 127 (341)
Q Consensus 49 ~~~~~yd~~~~~W~~l~~~~~p~~~~~~~~~~~g-lv~~~g~~~~~~~~~~~~~v~nP~t~~w~~lp~~~~~~~~~~~~~ 127 (341)
..+.++|.....-+.+.... .....+.-+-+| .|...+.. .....++++|..+++.+.+..... ......
T Consensus 159 ~~i~i~d~~g~~~~~l~~~~--~~v~~~~~Spdg~~la~~s~~----~~~~~i~~~d~~tg~~~~l~~~~~---~~~~~~ 229 (415)
T 2hqs_A 159 YELRVSDYDGYNQFVVHRSP--QPLMSPAWSPDGSKLAYVTFE----SGRSALVIQTLANGAVRQVASFPR---HNGAPA 229 (415)
T ss_dssp EEEEEEETTSCSCEEEEEES--SCEEEEEECTTSSEEEEEECT----TSSCEEEEEETTTCCEEEEECCSS---CEEEEE
T ss_pred ceEEEEcCCCCCCEEEeCCC--CcceeeEEcCCCCEEEEEEec----CCCcEEEEEECCCCcEEEeecCCC---cccCEE
Confidence 45777787655444443111 111122223344 44433321 123589999999998776554321 111233
Q ss_pred EcCCCc-EEEEc-----CeEEEEEcCCCccccccccCCCCCCCcccccCceEEEeecCCCcCCcceeeEeecccCCCCce
Q 041767 128 VDSLNK-VMVLT-----ELAALFFSNSNHWLKFSSNLPSKPRSPILMLNSVYALCDVGSPWRSQWKLFCCNLSSLTNSQQ 201 (341)
Q Consensus 128 ~~~~~k-i~~~g-----~~~evYd~~t~~W~~~~~~~p~~~r~~~~~~~~~y~~~~~G~~~~~~~~~~~~~~~~~~~~~v 201 (341)
..++++ +++.+ ..+.+||..++..+.+.. .+.... . ..+.-.|. .+...........+
T Consensus 230 ~spdg~~la~~~~~~g~~~i~~~d~~~~~~~~l~~-~~~~~~-~-------~~~spdg~-------~l~~~s~~~g~~~i 293 (415)
T 2hqs_A 230 FSPDGSKLAFALSKTGSLNLYVMDLASGQIRQVTD-GRSNNT-E-------PTWFPDSQ-------NLAFTSDQAGRPQV 293 (415)
T ss_dssp ECTTSSEEEEEECTTSSCEEEEEETTTCCEEECCC-CSSCEE-E-------EEECTTSS-------EEEEEECTTSSCEE
T ss_pred EcCCCCEEEEEEecCCCceEEEEECCCCCEEeCcC-CCCccc-c-------eEECCCCC-------EEEEEECCCCCcEE
Confidence 345564 55443 248888998877655442 111000 0 01111121 11111110111246
Q ss_pred eEEEcccccccccccccCCccEEE-EeCCEEEEEEeeccccccccccceEEEEEEeCCCCcEEEeccCCHHHHHhhcCCC
Q 041767 202 FWHCLERREWGDVFDILKRPRLVR-GVGNRILMIGGLKSSFTLNASCSTILILRLDLDLLEWEEAGRMPVEMYRCFSESS 280 (341)
Q Consensus 202 ~~yD~~~~~W~~~~~~~~~~~lv~-~~~g~l~vvgg~~~~~~~~~~~~~~~vw~~d~~~~~W~~~~~mp~~~~~~~~~~~ 280 (341)
..+|+.+++-..+........-+. .-+|+.++++..... ...|+.+|..+.....+..-. . ..
T Consensus 294 ~~~d~~~~~~~~l~~~~~~~~~~~~spdG~~l~~~~~~~g--------~~~i~~~d~~~~~~~~l~~~~----~----~~ 357 (415)
T 2hqs_A 294 YKVNINGGAPQRITWEGSQNQDADVSSDGKFMVMVSSNGG--------QQHIAKQDLATGGVQVLSSTF----L----DE 357 (415)
T ss_dssp EEEETTSSCCEECCCSSSEEEEEEECTTSSEEEEEEECSS--------CEEEEEEETTTCCEEECCCSS----S----CE
T ss_pred EEEECCCCCEEEEecCCCcccCeEECCCCCEEEEEECcCC--------ceEEEEEECCCCCEEEecCCC----C----cC
Confidence 777887765333321000011111 124554444433221 124555566666665543221 0 01
Q ss_pred ceEEEecCCEEEEEEccc--CcEEEEEeeeCCCCeeEEcCCCCCCCCCCeeeEEeeccc
Q 041767 281 KFKVFGMGDKVCFSAKRV--GRLALWECEKGGGGEWRWIDGLPGIGDGPCRGFVYEASL 337 (341)
Q Consensus 281 ~~~~~~~~~~i~~~~~~~--~~v~~yD~~~~~~~~W~~~~~~~~~~~~~~~~~~~~p~~ 337 (341)
.+...-.+..|++.+... ..+.++|+. .+..+.++.. ++.+...+|.|-+
T Consensus 358 ~~~~spdg~~l~~~s~~~~~~~l~~~d~~---g~~~~~l~~~----~~~v~~~~~~~~~ 409 (415)
T 2hqs_A 358 TPSLAPNGTMVIYSSSQGMGSVLNLVSTD---GRFKARLPAT----DGQVKFPAWSPYL 409 (415)
T ss_dssp EEEECTTSSEEEEEEEETTEEEEEEEETT---SCCEEECCCS----SSEEEEEEECCCC
T ss_pred CeEEcCCCCEEEEEEcCCCccEEEEEECC---CCcEEEeeCC----CCCCcCCcccccc
Confidence 112222345565544332 268889988 6666666553 3457777777753
No 122
>4a0p_A LRP6, LRP-6, low-density lipoprotein receptor-related protein; signaling, WNT signalling, WNT3A, DKK1, MESD; HET: NAG; 1.90A {Homo sapiens} PDB: 3s2k_A* 3s8z_A* 3s8v_A*
Probab=27.90 E-value=3.9e+02 Score=25.24 Aligned_cols=181 Identities=12% Similarity=0.020 Sum_probs=89.9
Q ss_pred ccCCEEEEecCCCCCCCCCceEEEEcCcccceecCCCCCCCCceeEEEEEc-CCCcEEEEc---CeEEEEEcCCCccccc
Q 041767 79 SSPGLIYLWGDLPDSPESNKSLIACNPLTRLYRVLPQLGSAWSKHGSVLVD-SLNKVMVLT---ELAALFFSNSNHWLKF 154 (341)
Q Consensus 79 ~~~glv~~~g~~~~~~~~~~~~~v~nP~t~~w~~lp~~~~~~~~~~~~~~~-~~~ki~~~g---~~~evYd~~t~~W~~~ 154 (341)
..+|.||..... ...+..+++.......+..... .....+++| .++++|+.. +.+++++.....=+.+
T Consensus 46 ~~~~~lywtD~~------~~~I~r~~~~g~~~~~v~~~g~--~~P~GlAvD~~~~~LY~tD~~~~~I~v~~~dG~~~~~l 117 (628)
T 4a0p_A 46 VTDNRIYWTDIS------LKTISRAFMNGSALEHVVEFGL--DYPEGMAVDWLGKNLYWADTGTNRIEVSKLDGQHRQVL 117 (628)
T ss_dssp TTTTEEEEEETT------TTEEEEEETTSCSCEEEECSSC--SCCCEEEEETTTTEEEEEETTTTEEEEEETTSTTCEEE
T ss_pred CCCCEEEEEECC------CCeEEEEECCCCCcEEEEeCCC--CCcceEEEEeCCCEEEEEECCCCEEEEEecCCCcEEEE
Confidence 347899988653 5688889887665544332211 122244455 467899974 5789998764321222
Q ss_pred c-ccCCCCCCCcccc--cCceEEEeecCCCcCCcceeeEeecccCCCCceeEEEcccccccccccccCCccEEEEe--CC
Q 041767 155 S-SNLPSKPRSPILM--LNSVYALCDVGSPWRSQWKLFCCNLSSLTNSQQFWHCLERREWGDVFDILKRPRLVRGV--GN 229 (341)
Q Consensus 155 ~-~~~p~~~r~~~~~--~~~~y~~~~~G~~~~~~~~~~~~~~~~~~~~~v~~yD~~~~~W~~~~~~~~~~~lv~~~--~g 229 (341)
. ..+. .++.-++. .+.+|+- + .. ....|+.+++....-+.+...+..|.-++.. ++
T Consensus 118 ~~~~l~-~P~~iavdp~~G~lY~t-D---------------~g--~~~~I~r~~~dG~~~~~l~~~~~~P~GlalD~~~~ 178 (628)
T 4a0p_A 118 VWKDLD-SPRALALDPAEGFMYWT-E---------------WG--GKPKIDRAAMDGSERTTLVPNVGRANGLTIDYAKR 178 (628)
T ss_dssp ECSSCC-CEEEEEEETTTTEEEEE-E---------------CS--SSCEEEEEETTSCSCEEEECSCSSEEEEEEETTTT
T ss_pred EeCCCC-CcccEEEccCCCeEEEe-C---------------CC--CCCEEEEEeCCCCceEEEECCCCCcceEEEccccC
Confidence 1 1111 11110111 1222221 1 01 0135777777654333332233345444433 68
Q ss_pred EEEEEEeeccccccccccceEEEEEEeCCC-CcEEEec-cCCHHHHHhhcCCCceEEEecCCEEEEEEcccCcEEEEEee
Q 041767 230 RILMIGGLKSSFTLNASCSTILILRLDLDL-LEWEEAG-RMPVEMYRCFSESSKFKVFGMGDKVCFSAKRVGRLALWECE 307 (341)
Q Consensus 230 ~l~vvgg~~~~~~~~~~~~~~~vw~~d~~~-~~W~~~~-~mp~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~v~~yD~~ 307 (341)
+||++..... .|+.+|..+ +. +.+. .++. .+.+...++.||+.....+.|..+|..
T Consensus 179 ~LY~aD~~~~-----------~I~~~d~dG~~~-~v~~~~l~~----------P~glav~~~~ly~tD~~~~~I~~~dk~ 236 (628)
T 4a0p_A 179 RLYWTDLDTN-----------LIESSNMLGLNR-EVIADDLPH----------PFGLTQYQDYIYWTDWSRRSIERANKT 236 (628)
T ss_dssp EEEEEETTTT-----------EEEEEETTSCSC-EEEEECCSC----------EEEEEEETTEEEEEETTTTEEEEEETT
T ss_pred EEEEEECCCC-----------EEEEEcCCCCce-EEeeccCCC----------ceEEEEECCEEEEecCCCCEEEEEECC
Confidence 9998864221 355555532 22 3222 1221 122333457888877555778888865
Q ss_pred e
Q 041767 308 K 308 (341)
Q Consensus 308 ~ 308 (341)
+
T Consensus 237 t 237 (628)
T 4a0p_A 237 S 237 (628)
T ss_dssp T
T ss_pred C
Confidence 3
No 123
>4aez_A CDC20, WD repeat-containing protein SLP1; cell cycle, KEN-BOX, D-BOX, APC/C; 2.30A {Schizosaccharomyces pombe}
Probab=27.29 E-value=3e+02 Score=23.63 Aligned_cols=54 Identities=11% Similarity=0.044 Sum_probs=32.9
Q ss_pred CceEEEEcCcccceecCCCCCCCCceeEEEEEcCCCcEEEEc---CeEEEEEcCCCcc
Q 041767 97 NKSLIACNPLTRLYRVLPQLGSAWSKHGSVLVDSLNKVMVLT---ELAALFFSNSNHW 151 (341)
Q Consensus 97 ~~~~~v~nP~t~~w~~lp~~~~~~~~~~~~~~~~~~ki~~~g---~~~evYd~~t~~W 151 (341)
.+.+.+||..+++....-...... ....+...++++.++++ +.+.+||..+++-
T Consensus 112 d~~v~lw~~~~~~~~~~~~~~~~~-~v~~v~~s~~~~~l~~~~~dg~i~iwd~~~~~~ 168 (401)
T 4aez_A 112 ERNVYVWNADSGSVSALAETDEST-YVASVKWSHDGSFLSVGLGNGLVDIYDVESQTK 168 (401)
T ss_dssp TTEEEEEETTTCCEEEEEECCTTC-CEEEEEECTTSSEEEEEETTSCEEEEETTTCCE
T ss_pred CCeEEEeeCCCCcEeEeeecCCCC-CEEEEEECCCCCEEEEECCCCeEEEEECcCCeE
Confidence 468999999998876544332111 11122333456666655 5799999887654
No 124
>3e5z_A Putative gluconolactonase; X-RAY NESG Q9RXN3 gluconolactonase, structural genomics, PSI protein structure initiative; 2.01A {Deinococcus radiodurans}
Probab=26.49 E-value=2.1e+02 Score=23.33 Aligned_cols=65 Identities=3% Similarity=-0.035 Sum_probs=40.9
Q ss_pred CCEEEEecCCCCCCCCCceEEEEcCcccceecCCCCCCCCceeEEEEEcCCCcEEEEc---CeEEEEEcCCCcccccc
Q 041767 81 PGLIYLWGDLPDSPESNKSLIACNPLTRLYRVLPQLGSAWSKHGSVLVDSLNKVMVLT---ELAALFFSNSNHWLKFS 155 (341)
Q Consensus 81 ~glv~~~g~~~~~~~~~~~~~v~nP~t~~w~~lp~~~~~~~~~~~~~~~~~~ki~~~g---~~~evYd~~t~~W~~~~ 155 (341)
++.|++.+.. ...+.+||+.++ .+.+.... .....+..++++++++.. ..+.+||+.+++.+.+.
T Consensus 39 g~~l~~~~~~------~~~i~~~~~~~~-~~~~~~~~---~~~~~l~~~~dg~l~v~~~~~~~i~~~d~~~g~~~~~~ 106 (296)
T 3e5z_A 39 RSAVIFSDVR------QNRTWAWSDDGQ-LSPEMHPS---HHQNGHCLNKQGHLIACSHGLRRLERQREPGGEWESIA 106 (296)
T ss_dssp GTEEEEEEGG------GTEEEEEETTSC-EEEEESSC---SSEEEEEECTTCCEEEEETTTTEEEEECSTTCCEEEEE
T ss_pred CCEEEEEeCC------CCEEEEEECCCC-eEEEECCC---CCcceeeECCCCcEEEEecCCCeEEEEcCCCCcEEEEe
Confidence 4435555532 468999999988 55443211 112244555677888764 46999999888876553
No 125
>3f3f_A Nucleoporin SEH1; structural protein, protein complex, nucleopori complex, nuclear pore complex, macromolecular assembly, MEM coat; 2.90A {Saccharomyces cerevisiae} PDB: 3f3g_A 3f3p_A 3ewe_A
Probab=25.47 E-value=2.7e+02 Score=22.56 Aligned_cols=24 Identities=25% Similarity=0.527 Sum_probs=15.3
Q ss_pred EEcccCcEEEEEeeeCCCCeeEEcCC
Q 041767 294 SAKRVGRLALWECEKGGGGEWRWIDG 319 (341)
Q Consensus 294 ~~~~~~~v~~yD~~~~~~~~W~~~~~ 319 (341)
.+...+.+.+||+.+ .+.|+.+..
T Consensus 323 s~~~dg~v~iw~~~~--~~~~~~~~~ 346 (351)
T 3f3f_A 323 SAGDDGKVRLWKATY--SNEFKCMSV 346 (351)
T ss_dssp EEETTSCEEEEEECT--TSCEEEEEE
T ss_pred EecCCCcEEEEecCc--Ccchhheee
Confidence 333346789999984 456766554
No 126
>1yfq_A Cell cycle arrest protein BUB3; WD repeat WD40 repeat beta transducin repeat all beta, signaling protein; 1.10A {Saccharomyces cerevisiae} SCOP: b.69.4.2 PDB: 1u4c_A 2i3s_A 2i3t_A
Probab=25.12 E-value=2.8e+02 Score=22.68 Aligned_cols=50 Identities=4% Similarity=0.048 Sum_probs=28.1
Q ss_pred CceEEEEcC-cccceecCCCCCCCCceeEEEEEcCCCcEEEEc---CeEEEEEcCC
Q 041767 97 NKSLIACNP-LTRLYRVLPQLGSAWSKHGSVLVDSLNKVMVLT---ELAALFFSNS 148 (341)
Q Consensus 97 ~~~~~v~nP-~t~~w~~lp~~~~~~~~~~~~~~~~~~ki~~~g---~~~evYd~~t 148 (341)
...+.+||. .+++...+........-...... + ++.++.+ +.+.+||.++
T Consensus 78 dg~i~~wd~~~~~~~~~~~~~~~~~~v~~l~~~-~-~~~l~s~~~d~~i~iwd~~~ 131 (342)
T 1yfq_A 78 QGEILKVDLIGSPSFQALTNNEANLGICRICKY-G-DDKLIAASWDGLIEVIDPRN 131 (342)
T ss_dssp TSCEEEECSSSSSSEEECBSCCCCSCEEEEEEE-T-TTEEEEEETTSEEEEECHHH
T ss_pred CCeEEEEEeccCCceEeccccCCCCceEEEEeC-C-CCEEEEEcCCCeEEEEcccc
Confidence 568999999 88877666541111111112222 4 5444443 4788898764
No 127
>2ece_A 462AA long hypothetical selenium-binding protein; beta propeller, structural genomics, unknown function; 2.00A {Sulfolobus tokodaii}
Probab=25.08 E-value=2.2e+02 Score=25.94 Aligned_cols=27 Identities=7% Similarity=0.096 Sum_probs=21.7
Q ss_pred ceEEEecCCEEEEEEcccCcEEEEEee
Q 041767 281 KFKVFGMGDKVCFSAKRVGRLALWECE 307 (341)
Q Consensus 281 ~~~~~~~~~~i~~~~~~~~~v~~yD~~ 307 (341)
.+.+...+..+|++....+.|.+||+.
T Consensus 325 ~I~lS~DGrfLYVSnrg~d~VavfdV~ 351 (462)
T 2ece_A 325 DIDISLDDKFLYLSLWGIGEVRQYDIS 351 (462)
T ss_dssp CEEECTTSCEEEEEETTTTEEEEEECS
T ss_pred EEEECCCCCEEEEEeCCCCEEEEEEec
Confidence 455556678899988877899999986
No 128
>3ott_A Two-component system sensor histidine kinase; beta-propeller, beta-sandwich, transcription; HET: TBR; 2.30A {Bacteroides thetaiotaomicron} PDB: 3va6_A
Probab=24.13 E-value=3.6e+02 Score=25.88 Aligned_cols=88 Identities=9% Similarity=-0.010 Sum_probs=44.1
Q ss_pred EEEeeCCCCcEEEeeCCCCCCCCcceeeccCCEEEEecCCCCCCCCCceEEEEcCcccceecCCCCCCCCceeEEEEEcC
Q 041767 51 LHVYDPNQNQWLRFDLSFLPFRSLHPVASSPGLIYLWGDLPDSPESNKSLIACNPLTRLYRVLPQLGSAWSKHGSVLVDS 130 (341)
Q Consensus 51 ~~~yd~~~~~W~~l~~~~~p~~~~~~~~~~~glv~~~g~~~~~~~~~~~~~v~nP~t~~w~~lp~~~~~~~~~~~~~~~~ 130 (341)
+..|||.+++...+....+|......+...+|.|.+.. .+.+..+||.+.+.+...... .. ..++...+.
T Consensus 538 l~~~~~~~~~~~~~~~~gl~~~~i~~i~~~~g~lWi~t--------~~Gl~~~~~~~~~~~~~~~~~-~~-~~~~~~~~~ 607 (758)
T 3ott_A 538 VMRINPKDESQQSISFGSFSNNEILSMTCVKNSIWVST--------TNGLWIIDRKTMDARQQNMTN-KR-FTSLLFDPK 607 (758)
T ss_dssp EEEECC--CCCCBCCCCC---CCEEEEEEETTEEEEEE--------SSCEEEEETTTCCEEEC--CC-CC-CSEEEEETT
T ss_pred eEEEecCCCceEEecccCCCccceEEEEECCCCEEEEC--------CCCeEEEcCCCceeEEecCCC-Cc-eeeeEEECC
Confidence 45566666555443211122211111233467777664 346899999999887643111 11 123333445
Q ss_pred CCcEEEEc-CeEEEEEcCC
Q 041767 131 LNKVMVLT-ELAALFFSNS 148 (341)
Q Consensus 131 ~~ki~~~g-~~~evYd~~t 148 (341)
++++++-+ +.+-.|+|+.
T Consensus 608 ~G~l~fG~~~Gl~~f~p~~ 626 (758)
T 3ott_A 608 EDCVYLGGADGFGISHSNL 626 (758)
T ss_dssp TTEEEEECBSEEEEEEC--
T ss_pred CCcEEEecCCceEEEChhh
Confidence 67888876 4577888863
No 129
>4e54_B DNA damage-binding protein 2; beta barrel, double helix, DDB1:WD40 beta-barrel fold, DNA D DNA repair, HOST-virus interactions; HET: DNA 3DR; 2.85A {Homo sapiens} PDB: 3ei4_B*
Probab=22.98 E-value=3.8e+02 Score=23.33 Aligned_cols=64 Identities=9% Similarity=-0.008 Sum_probs=35.2
Q ss_pred cCCEEEEecCCCCCCCCCceEEEEcCcccceecCCCCCCCCceeEEEEEcCCCcEEEEc---CeEEEEEcCCC
Q 041767 80 SPGLIYLWGDLPDSPESNKSLIACNPLTRLYRVLPQLGSAWSKHGSVLVDSLNKVMVLT---ELAALFFSNSN 149 (341)
Q Consensus 80 ~~glv~~~g~~~~~~~~~~~~~v~nP~t~~w~~lp~~~~~~~~~~~~~~~~~~ki~~~g---~~~evYd~~t~ 149 (341)
.+|-+++.++. .+.+.+||..++..+.+............+....++++++.| +.+.+||....
T Consensus 175 ~~~~~l~s~s~------D~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~~dg~i~~wd~~~~ 241 (435)
T 4e54_B 175 LNTNQFYASSM------EGTTRLQDFKGNILRVFASSDTINIWFCSLDVSASSRMVVTGDNVGNVILLNMDGK 241 (435)
T ss_dssp SCTTEEEEECS------SSCEEEEETTSCEEEEEECCSSCSCCCCCEEEETTTTEEEEECSSSBEEEEESSSC
T ss_pred CCCCEEEEEeC------CCEEEEeeccCCceeEEeccCCCCccEEEEEECCCCCEEEEEeCCCcEeeeccCcc
Confidence 35544455543 467889998877665543322111111112233456777665 47889997654
No 130
>3zwl_B Eukaryotic translation initiation factor 3 subuni; 2.20A {Saccharomyces cerevisiae}
Probab=22.51 E-value=3.3e+02 Score=22.44 Aligned_cols=53 Identities=17% Similarity=0.009 Sum_probs=28.3
Q ss_pred CceEEEEcCcccceec-CCCCCCCCceeEEEEEcCCCcEEEEc---CeEEEEEcCCCccc
Q 041767 97 NKSLIACNPLTRLYRV-LPQLGSAWSKHGSVLVDSLNKVMVLT---ELAALFFSNSNHWL 152 (341)
Q Consensus 97 ~~~~~v~nP~t~~w~~-lp~~~~~~~~~~~~~~~~~~ki~~~g---~~~evYd~~t~~W~ 152 (341)
...+.+||..+++-.. +..-. .....+...++++.++.+ +.+.+||..+++-.
T Consensus 53 dg~i~vwd~~~~~~~~~~~~h~---~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~ 109 (369)
T 3zwl_B 53 DSSASVWYSLNGERLGTLDGHT---GTIWSIDVDCFTKYCVTGSADYSIKLWDVSNGQCV 109 (369)
T ss_dssp SSCEEEEETTTCCEEEEECCCS---SCEEEEEECTTSSEEEEEETTTEEEEEETTTCCEE
T ss_pred CCEEEEEeCCCchhhhhhhhcC---CcEEEEEEcCCCCEEEEEeCCCeEEEEECCCCcEE
Confidence 4578888877665432 21111 011122333455555544 47999998876543
No 131
>3p5b_L Low density lipoprotein receptor variant; B-propellor, convertase, hydrolase-lipid binding P complex; 3.30A {Homo sapiens} PDB: 3p5c_L
Probab=21.39 E-value=4.1e+02 Score=23.18 Aligned_cols=89 Identities=13% Similarity=0.187 Sum_probs=45.2
Q ss_pred ceeEEEcccccccccccccCCccEEEEe--CCEEEEEEeeccccccccccceEEEEEEeCCC----CcEEEe-c-cCCHH
Q 041767 200 QQFWHCLERREWGDVFDILKRPRLVRGV--GNRILMIGGLKSSFTLNASCSTILILRLDLDL----LEWEEA-G-RMPVE 271 (341)
Q Consensus 200 ~v~~yD~~~~~W~~~~~~~~~~~lv~~~--~g~l~vvgg~~~~~~~~~~~~~~~vw~~d~~~----~~W~~~-~-~mp~~ 271 (341)
.|...|+....+..+...+..+..+++. +++||++..... .|++++..+ ...+.+ . .+..+
T Consensus 93 ~I~~i~l~~~~~~~~~~~~~~~~~l~~d~~~~~lywsD~~~~-----------~I~~~~~~g~~~~~~~~~~~~~~~~~p 161 (400)
T 3p5b_L 93 EVRKMTLDRSEYTSLIPNLRNVVALDTEVASNRIYWSDLSQR-----------MICSTQLDRAHGVSSYDTVISRDIQAP 161 (400)
T ss_dssp EEEEECTTSCSCEEEECSCSCEEEEEEETTTTEEEEEETTTT-----------EEEEEEC------CCCEEEECSSCSCE
T ss_pred eeEEEccCCcceeEeccccCcceEEeeeeccCceEEEecCCC-----------eEEEEEcccCCCCCcceEEEeCCCCCc
Confidence 4667777776665554334444444433 688998764321 345555532 112222 2 11111
Q ss_pred HHHhhcCCCceEEEecCCEEEEEEcccCcEEEEEee
Q 041767 272 MYRCFSESSKFKVFGMGDKVCFSAKRVGRLALWECE 307 (341)
Q Consensus 272 ~~~~~~~~~~~~~~~~~~~i~~~~~~~~~v~~yD~~ 307 (341)
..+.+-..++.||+.....+.|.++|+.
T Consensus 162 --------~glavD~~~~~lY~~d~~~~~I~~~~~~ 189 (400)
T 3p5b_L 162 --------DGLAVDWIHSNIYWTDSVLGTVSVADTK 189 (400)
T ss_dssp --------EEEEEETTTTEEEEEETTTTEEEEECTT
T ss_pred --------ccEEEEecCCceEEEECCCCeEEEEeCC
Confidence 0122222367788776555667777776
No 132
>4aow_A Guanine nucleotide-binding protein subunit beta-2; receptor, WD-repeat, beta-propeller; 2.45A {Homo sapiens} PDB: 2zkq_a
Probab=20.82 E-value=3.4e+02 Score=22.07 Aligned_cols=19 Identities=11% Similarity=0.322 Sum_probs=12.3
Q ss_pred EEEEEEcccCcEEEEEeee
Q 041767 290 KVCFSAKRVGRLALWECEK 308 (341)
Q Consensus 290 ~i~~~~~~~~~v~~yD~~~ 308 (341)
...+.+...+.|.+||+++
T Consensus 319 ~~l~sgs~Dg~v~iW~~~t 337 (340)
T 4aow_A 319 QTLFAGYTDNLVRVWQVTI 337 (340)
T ss_dssp SEEEEEETTSCEEEEEEEC
T ss_pred CEEEEEeCCCEEEEEeCCC
Confidence 3444444447799999993
No 133
>3lp9_A LS-24; SEED albumin, plant protein; HET: SPM; 2.20A {Lathyrus sativus} PDB: 3s0l_A 3v6n_A 4hsd_A 3s18_A
Probab=20.61 E-value=2.7e+02 Score=22.41 Aligned_cols=62 Identities=6% Similarity=0.022 Sum_probs=35.6
Q ss_pred ccCCEEEEecCCCCCCCCCceEEEEc---------------CcccceecCCCCCCCCceeEEEEEc-CCCcEEEE-cCeE
Q 041767 79 SSPGLIYLWGDLPDSPESNKSLIACN---------------PLTRLYRVLPQLGSAWSKHGSVLVD-SLNKVMVL-TELA 141 (341)
Q Consensus 79 ~~~glv~~~g~~~~~~~~~~~~~v~n---------------P~t~~w~~lp~~~~~~~~~~~~~~~-~~~ki~~~-g~~~ 141 (341)
..+|.+|+.-| +.+++++ +++..|.-||.-..+.... +++.. .++++|+. |+..
T Consensus 70 ~~~g~~~fFKg--------~~~Wr~~~~~~~~~~~~~~gP~~I~~~w~gLp~~~~p~~ID-AA~~~~~~~k~yfFkG~~y 140 (227)
T 3lp9_A 70 TENNEAFIFYE--------NFCALIDYAPHSKKDKIILGPKKIADVFPFFEGTVFESGID-AAYRSTRGKEVYLFKGDQY 140 (227)
T ss_dssp CSTTEEEEEET--------TEEEEEECCTTTCCCEEEEEEEEHHHHSGGGTTSTTTTCCS-EEEECSSTTEEEEEETTEE
T ss_pred CCCCEEEEEeC--------CEEEEEeCCCCccccccccCceEHhhhcCCCCCccCCCccc-EEEEECCCCEEEEEECCEE
Confidence 35788887754 3566665 3455566665321111112 33333 36789887 5688
Q ss_pred EEEEcCCC
Q 041767 142 ALFFSNSN 149 (341)
Q Consensus 142 evYd~~t~ 149 (341)
.+||..++
T Consensus 141 w~~d~~~~ 148 (227)
T 3lp9_A 141 ARIDYGSN 148 (227)
T ss_dssp EEEETTTT
T ss_pred EEEeCCCc
Confidence 99998754
No 134
>2ghs_A AGR_C_1268P; regucalcin, structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PSI-2; 1.55A {Agrobacterium tumefaciens str} SCOP: b.68.6.1
Probab=20.36 E-value=2.2e+02 Score=23.82 Aligned_cols=64 Identities=11% Similarity=-0.040 Sum_probs=0.0
Q ss_pred CCEEEEecCCCCCCCCCceEEEEcCcccceecCCCCCCCCceeEEEEEcCCCcEEEEc-CeEEEEEcCCCccccc
Q 041767 81 PGLIYLWGDLPDSPESNKSLIACNPLTRLYRVLPQLGSAWSKHGSVLVDSLNKVMVLT-ELAALFFSNSNHWLKF 154 (341)
Q Consensus 81 ~glv~~~g~~~~~~~~~~~~~v~nP~t~~w~~lp~~~~~~~~~~~~~~~~~~ki~~~g-~~~evYd~~t~~W~~~ 154 (341)
++.+++.+.. ...++++|+.+++.+.+.... ....+..+.++++++.. ..+.+||..+++.+.+
T Consensus 60 ~~~l~~~d~~------~~~i~~~d~~~~~~~~~~~~~----~v~~i~~~~dg~l~v~~~~gl~~~d~~~g~~~~~ 124 (326)
T 2ghs_A 60 SGTAWWFNIL------ERELHELHLASGRKTVHALPF----MGSALAKISDSKQLIASDDGLFLRDTATGVLTLH 124 (326)
T ss_dssp TTEEEEEEGG------GTEEEEEETTTTEEEEEECSS----CEEEEEEEETTEEEEEETTEEEEEETTTCCEEEE
T ss_pred CCEEEEEECC------CCEEEEEECCCCcEEEEECCC----cceEEEEeCCCeEEEEECCCEEEEECCCCcEEEE
Done!