BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 041773
(155 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|224074494|ref|XP_002304380.1| predicted protein [Populus trichocarpa]
gi|118485977|gb|ABK94833.1| unknown [Populus trichocarpa]
gi|222841812|gb|EEE79359.1| predicted protein [Populus trichocarpa]
Length = 321
Score = 168 bits (425), Expect = 9e-40, Method: Compositional matrix adjust.
Identities = 86/155 (55%), Positives = 101/155 (65%), Gaps = 3/155 (1%)
Query: 1 RLILYPNGNKKGQGTGHISLYLALDESTYFPNNPWEVFVNFTFFVQDRIKNEYLAIRYDD 60
RL LYPNGNKK G GHISLYLA S P WEV VNF FV ++I+++YL I+Y
Sbjct: 63 RLRLYPNGNKKNNGDGHISLYLAFSNSNALPFG-WEVNVNFRLFVYNQIQDKYLTIQYAK 121
Query: 61 GAVIRLHSMKRECGIDKLIPLQAFKEPSNGYLVDDSCVFGAEIFVIKPTGKGEALSIVKV 120
G V R H MK E G D+LIPL F + S GYL+DD C+FGAEIFVIKPTGKGE L++V
Sbjct: 122 GRVRRFHGMKTELGFDQLIPLTIFNDESKGYLIDDRCIFGAEIFVIKPTGKGECLTLVNQ 181
Query: 121 PAQAGNILRWKIPNFSDLRDPEYYSSEFNAGGREW 155
P + WKI NFS L Y S F+ GG +W
Sbjct: 182 P--VSDTFTWKIQNFSALDQESYKSQVFSFGGYKW 214
>gi|224139110|ref|XP_002326770.1| predicted protein [Populus trichocarpa]
gi|222834092|gb|EEE72569.1| predicted protein [Populus trichocarpa]
Length = 324
Score = 153 bits (386), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 78/155 (50%), Positives = 96/155 (61%), Gaps = 3/155 (1%)
Query: 1 RLILYPNGNKKGQGTGHISLYLALDESTYFPNNPWEVFVNFTFFVQDRIKNEYLAIRYDD 60
RL L+PNGNKK G GHISLYLA +S P WEV V+F FV ++I ++YL I+ +
Sbjct: 56 RLCLHPNGNKKSNGDGHISLYLAFSKSNA-PPLGWEVNVDFKLFVYNQIHDKYLTIQNAN 114
Query: 61 GAVIRLHSMKRECGIDKLIPLQAFKEPSNGYLVDDSCVFGAEIFVIKPTGKGEALSIVKV 120
G V R H MK E G D+L+PL F + S GYL+DD C FGAEIFVIK T KGE LS++K
Sbjct: 115 GRVRRFHGMKTEMGFDQLLPLTLFNDESKGYLIDDCCTFGAEIFVIKHTSKGECLSLMKQ 174
Query: 121 PAQAGNILRWKIPNFSDLRDPEYYSSEFNAGGREW 155
P+ + W I FS L S F GG +W
Sbjct: 175 PSHSS--FTWSIQKFSALDQESCKSQVFATGGHKW 207
>gi|296083023|emb|CBI22427.3| unnamed protein product [Vitis vinifera]
Length = 389
Score = 150 bits (378), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 74/155 (47%), Positives = 94/155 (60%), Gaps = 3/155 (1%)
Query: 1 RLILYPNGNKKGQGTGHISLYLALDESTYFPNNPWEVFVNFTFFVQDRIKNEYLAIRYDD 60
RL LYPNGNKK G GHISLYL + ++ P WEV V+F FV + I EYL ++ D
Sbjct: 127 RLCLYPNGNKKSDGDGHISLYLVISDTQNLPLG-WEVTVSFKLFVFNHIHEEYLTVQDTD 185
Query: 61 GAVIRLHSMKRECGIDKLIPLQAFKEPSNGYLVDDSCVFGAEIFVIKPTGKGEALSIVKV 120
G V + MK +CG + +PL +P NGYL+DDSC+FGAE+FVIK +GKGE LS++K
Sbjct: 186 GKVRHFNVMKTQCGFAQFLPLDVLTDPCNGYLMDDSCIFGAEVFVIKYSGKGECLSMIKE 245
Query: 121 PAQAGNILRWKIPNFSDLRDPEYYSSEFNAGGREW 155
P W I NFS L+ YS F +W
Sbjct: 246 PDDG--TFTWMIENFSRLKQEAIYSEIFTVKDFKW 278
>gi|225429037|ref|XP_002265732.1| PREDICTED: uncharacterized protein LOC100258339 [Vitis vinifera]
Length = 261
Score = 150 bits (378), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 74/155 (47%), Positives = 94/155 (60%), Gaps = 3/155 (1%)
Query: 1 RLILYPNGNKKGQGTGHISLYLALDESTYFPNNPWEVFVNFTFFVQDRIKNEYLAIRYDD 60
RL LYPNGNKK G GHISLYL + ++ P WEV V+F FV + I EYL ++ D
Sbjct: 52 RLCLYPNGNKKSDGDGHISLYLVISDTQNLPLG-WEVTVSFKLFVFNHIHEEYLTVQDTD 110
Query: 61 GAVIRLHSMKRECGIDKLIPLQAFKEPSNGYLVDDSCVFGAEIFVIKPTGKGEALSIVKV 120
G V + MK +CG + +PL +P NGYL+DDSC+FGAE+FVIK +GKGE LS++K
Sbjct: 111 GKVRHFNVMKTQCGFAQFLPLDVLTDPCNGYLMDDSCIFGAEVFVIKYSGKGECLSMIKE 170
Query: 121 PAQAGNILRWKIPNFSDLRDPEYYSSEFNAGGREW 155
P W I NFS L+ YS F +W
Sbjct: 171 PDDG--TFTWMIENFSRLKQEAIYSEIFTVKDFKW 203
>gi|225429033|ref|XP_002265318.1| PREDICTED: uncharacterized protein LOC100259955 isoform 1 [Vitis
vinifera]
Length = 331
Score = 143 bits (360), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 73/155 (47%), Positives = 92/155 (59%), Gaps = 3/155 (1%)
Query: 1 RLILYPNGNKKGQGTGHISLYLALDESTYFPNNPWEVFVNFTFFVQDRIKNEYLAIRYDD 60
RL LYPNGNKK G HISLYL + ++ P WEV VNF FV + I +YL ++ D
Sbjct: 69 RLCLYPNGNKKSGGEDHISLYLEISDAQKLPVG-WEVTVNFKLFVFNHIHEKYLTVQDAD 127
Query: 61 GAVIRLHSMKRECGIDKLIPLQAFKEPSNGYLVDDSCVFGAEIFVIKPTGKGEALSIVKV 120
G V + MK CG + + L K+P NGYL+DDSC+FGAE+FVIK +GKGE LS++K
Sbjct: 128 GKVRDFNVMKSRCGFAQFLSLDVLKDPCNGYLMDDSCIFGAEVFVIKYSGKGECLSMIKD 187
Query: 121 PAQAGNILRWKIPNFSDLRDPEYYSSEFNAGGREW 155
P W I NFS L + YS F +W
Sbjct: 188 PDDG--TFTWVIENFSTLNEEVLYSETFTIKEIKW 220
>gi|359475437|ref|XP_003631686.1| PREDICTED: uncharacterized protein LOC100259955 isoform 2 [Vitis
vinifera]
Length = 314
Score = 142 bits (359), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 73/155 (47%), Positives = 92/155 (59%), Gaps = 3/155 (1%)
Query: 1 RLILYPNGNKKGQGTGHISLYLALDESTYFPNNPWEVFVNFTFFVQDRIKNEYLAIRYDD 60
RL LYPNGNKK G HISLYL + ++ P WEV VNF FV + I +YL ++ D
Sbjct: 52 RLCLYPNGNKKSGGEDHISLYLEISDAQKLPVG-WEVTVNFKLFVFNHIHEKYLTVQDAD 110
Query: 61 GAVIRLHSMKRECGIDKLIPLQAFKEPSNGYLVDDSCVFGAEIFVIKPTGKGEALSIVKV 120
G V + MK CG + + L K+P NGYL+DDSC+FGAE+FVIK +GKGE LS++K
Sbjct: 111 GKVRDFNVMKSRCGFAQFLSLDVLKDPCNGYLMDDSCIFGAEVFVIKYSGKGECLSMIKD 170
Query: 121 PAQAGNILRWKIPNFSDLRDPEYYSSEFNAGGREW 155
P W I NFS L + YS F +W
Sbjct: 171 PDDG--TFTWVIENFSTLNEEVLYSETFTIKEIKW 203
>gi|296083026|emb|CBI22430.3| unnamed protein product [Vitis vinifera]
Length = 672
Score = 142 bits (359), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 73/155 (47%), Positives = 92/155 (59%), Gaps = 3/155 (1%)
Query: 1 RLILYPNGNKKGQGTGHISLYLALDESTYFPNNPWEVFVNFTFFVQDRIKNEYLAIRYDD 60
RL LYPNGNKK G HISLYL + ++ P WEV VNF FV + I +YL ++ D
Sbjct: 410 RLCLYPNGNKKSGGEDHISLYLEISDAQKLPVG-WEVTVNFKLFVFNHIHEKYLTVQDAD 468
Query: 61 GAVIRLHSMKRECGIDKLIPLQAFKEPSNGYLVDDSCVFGAEIFVIKPTGKGEALSIVKV 120
G V + MK CG + + L K+P NGYL+DDSC+FGAE+FVIK +GKGE LS++K
Sbjct: 469 GKVRDFNVMKSRCGFAQFLSLDVLKDPCNGYLMDDSCIFGAEVFVIKYSGKGECLSMIKD 528
Query: 121 PAQAGNILRWKIPNFSDLRDPEYYSSEFNAGGREW 155
P W I NFS L + YS F +W
Sbjct: 529 PDDG--TFTWVIENFSTLNEEVLYSETFTIKEIKW 561
Score = 142 bits (357), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 72/154 (46%), Positives = 92/154 (59%), Gaps = 3/154 (1%)
Query: 2 LILYPNGNKKGQGTGHISLYLALDESTYFPNNPWEVFVNFTFFVQDRIKNEYLAIRYDDG 61
L +YPNGNKK G GHISLYL + E+ P WEV VNF FV + I +YL ++ DG
Sbjct: 69 LCIYPNGNKKSDGEGHISLYLEISEAQNLPLG-WEVTVNFKLFVFNHIHEKYLTVQDADG 127
Query: 62 AVIRLHSMKRECGIDKLIPLQAFKEPSNGYLVDDSCVFGAEIFVIKPTGKGEALSIVKVP 121
V ++MK CG + + L K+P NGYL+DDSC+FGAE+FVIK +GKGE+LS++K P
Sbjct: 128 KVRHFNAMKTRCGFAQFLSLDVLKDPRNGYLMDDSCIFGAEVFVIKYSGKGESLSMIKDP 187
Query: 122 AQAGNILRWKIPNFSDLRDPEYYSSEFNAGGREW 155
W I NFS L S F +W
Sbjct: 188 VDG--TFTWTIENFSALNQEVLDSEIFTVKELKW 219
>gi|225429035|ref|XP_002268000.1| PREDICTED: MATH domain-containing protein At5g43560-like [Vitis
vinifera]
Length = 330
Score = 142 bits (358), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 72/154 (46%), Positives = 92/154 (59%), Gaps = 3/154 (1%)
Query: 2 LILYPNGNKKGQGTGHISLYLALDESTYFPNNPWEVFVNFTFFVQDRIKNEYLAIRYDDG 61
L +YPNGNKK G GHISLYL + E+ P WEV VNF FV + I +YL ++ DG
Sbjct: 69 LCIYPNGNKKSDGEGHISLYLEISEAQNLPLG-WEVTVNFKLFVFNHIHEKYLTVQDADG 127
Query: 62 AVIRLHSMKRECGIDKLIPLQAFKEPSNGYLVDDSCVFGAEIFVIKPTGKGEALSIVKVP 121
V ++MK CG + + L K+P NGYL+DDSC+FGAE+FVIK +GKGE+LS++K P
Sbjct: 128 KVRHFNAMKTRCGFAQFLSLDVLKDPRNGYLMDDSCIFGAEVFVIKYSGKGESLSMIKDP 187
Query: 122 AQAGNILRWKIPNFSDLRDPEYYSSEFNAGGREW 155
W I NFS L S F +W
Sbjct: 188 VDG--TFTWTIENFSALNQEVLDSEIFTVKELKW 219
>gi|356503299|ref|XP_003520448.1| PREDICTED: uncharacterized protein LOC100809118 [Glycine max]
Length = 322
Score = 142 bits (358), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 73/155 (47%), Positives = 97/155 (62%), Gaps = 3/155 (1%)
Query: 1 RLILYPNGNKKGQGTGHISLYLALDESTYFPNNPWEVFVNFTFFVQDRIKNEYLAIRYDD 60
RLILYP+GN K G G++SLYLA+ ++ + WEV VNF FV ++ N YL I+ D
Sbjct: 64 RLILYPSGNIKSNGNGYVSLYLAIADTEKLSSG-WEVDVNFKLFVFNQKNNNYLTIQDAD 122
Query: 61 GAVIRLHSMKRECGIDKLIPLQAFKEPSNGYLVDDSCVFGAEIFVIKPTGKGEALSIVKV 120
G V + MK E G ++LI L+ + SNGY V+DSC+FGAE+FVI +GK E+LS+VK
Sbjct: 123 GTVRKFQEMKTEWGFEQLISLETLLDSSNGYHVEDSCLFGAEVFVISRSGKWESLSMVKE 182
Query: 121 PAQAGNILRWKIPNFSDLRDPEYYSSEFNAGGREW 155
P WKI FS L + Y+S F G R+W
Sbjct: 183 PPHG--TFTWKIGKFSTLEETYYHSKSFTVGERDW 215
Score = 41.6 bits (96), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 28/105 (26%), Positives = 49/105 (46%), Gaps = 6/105 (5%)
Query: 2 LILYPNGNKKGQGTGHISLYLALDESTYFPNNPWEVFVNFTFFVQDRIKNEYLAIRYDDG 61
L +YP G + +G G +S+YL L + FP V+ F + D++ N+Y ++
Sbjct: 217 LRVYPRGIESERGKG-LSVYLQLTDCERFPAKR-TVYAKFKLGILDQLNNKY----HERT 270
Query: 62 AVIRLHSMKRECGIDKLIPLQAFKEPSNGYLVDDSCVFGAEIFVI 106
+ G KL+ L E + GY+ DD+ + +I V+
Sbjct: 271 DSHWFRASGNIWGFKKLVALSELYEAAKGYIKDDTVIVEVQILVM 315
>gi|225429031|ref|XP_002265247.1| PREDICTED: uncharacterized protein LOC100242863 [Vitis vinifera]
Length = 364
Score = 139 bits (350), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 69/155 (44%), Positives = 94/155 (60%), Gaps = 3/155 (1%)
Query: 1 RLILYPNGNKKGQGTGHISLYLALDESTYFPNNPWEVFVNFTFFVQDRIKNEYLAIRYDD 60
RL LYPNGN K G G+ISLYLA+ ++ P WEV VNF FV + ++YL ++
Sbjct: 80 RLCLYPNGNIKSNGKGYISLYLAIADTKMLPLG-WEVNVNFKLFVFNHKHDQYLTVQDAG 138
Query: 61 GAVIRLHSMKRECGIDKLIPLQAFKEPSNGYLVDDSCVFGAEIFVIKPTGKGEALSIVKV 120
G + R + MK +CG + + L +P NGYL++DSC+FGAE+FVIK +GKGE LS++K
Sbjct: 139 GKLTRFNVMKTQCGFPQFLSLDVLNDPCNGYLMEDSCIFGAEVFVIKYSGKGECLSMIKE 198
Query: 121 PAQAGNILRWKIPNFSDLRDPEYYSSEFNAGGREW 155
P W I NFS L++ YS F +W
Sbjct: 199 PVDG--TFTWVIENFSTLKEKVMYSDVFTVEDFKW 231
>gi|296083028|emb|CBI22432.3| unnamed protein product [Vitis vinifera]
Length = 321
Score = 139 bits (350), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 69/155 (44%), Positives = 94/155 (60%), Gaps = 3/155 (1%)
Query: 1 RLILYPNGNKKGQGTGHISLYLALDESTYFPNNPWEVFVNFTFFVQDRIKNEYLAIRYDD 60
RL LYPNGN K G G+ISLYLA+ ++ P WEV VNF FV + ++YL ++
Sbjct: 59 RLCLYPNGNIKSNGKGYISLYLAIADTKMLPLG-WEVNVNFKLFVFNHKHDQYLTVQDAG 117
Query: 61 GAVIRLHSMKRECGIDKLIPLQAFKEPSNGYLVDDSCVFGAEIFVIKPTGKGEALSIVKV 120
G + R + MK +CG + + L +P NGYL++DSC+FGAE+FVIK +GKGE LS++K
Sbjct: 118 GKLTRFNVMKTQCGFPQFLSLDVLNDPCNGYLMEDSCIFGAEVFVIKYSGKGECLSMIKE 177
Query: 121 PAQAGNILRWKIPNFSDLRDPEYYSSEFNAGGREW 155
P W I NFS L++ YS F +W
Sbjct: 178 PVDG--TFTWVIENFSTLKEKVMYSDVFTVEDFKW 210
>gi|224153137|ref|XP_002337319.1| predicted protein [Populus trichocarpa]
gi|222838767|gb|EEE77118.1| predicted protein [Populus trichocarpa]
Length = 222
Score = 136 bits (342), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 69/155 (44%), Positives = 98/155 (63%), Gaps = 5/155 (3%)
Query: 1 RLILYPNGNKKGQGTGHISLYLALDESTYFPNNPWEVFVNFTFFVQDRIKNEYLAIRYDD 60
+L+LYPNG+K G G+ISLYL + ++T FP WE+ F FV D+++++YL + D
Sbjct: 73 KLVLYPNGDKSRNGDGYISLYLVMADTTGFPAG-WEINAIFKLFVYDQLQDKYLT--FGD 129
Query: 61 GAVIRLHSMKRECGIDKLIPLQAFKEPSNGYLVDDSCVFGAEIFVIKPTGKGEALSIVKV 120
G + R ++K + G +++PL F SNGYL+ DSCVFGAE+FVIK GKGE S++K
Sbjct: 130 GRLRRFCAIKNKWGFPQMLPLSIFNNASNGYLIGDSCVFGAEVFVIKSEGKGERFSMIKD 189
Query: 121 PAQAGNILRWKIPNFSDLRDPEYYSSEFNAGGREW 155
P+ W++ FS L YYS + AGG EW
Sbjct: 190 PSDG--TFTWEVQYFSGLTGEFYYSKVYLAGGHEW 222
>gi|224100297|ref|XP_002311820.1| predicted protein [Populus trichocarpa]
gi|222851640|gb|EEE89187.1| predicted protein [Populus trichocarpa]
Length = 505
Score = 135 bits (340), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 75/155 (48%), Positives = 101/155 (65%), Gaps = 4/155 (2%)
Query: 1 RLILYPNGNKKGQGTGHISLYLALDESTYFPNNPWEVFVNFTFFVQDRIKNEYLAIRYDD 60
RL LYP+G+ G G+IS Y+ L + P +E+ V+F FV D ++EYL I+ +
Sbjct: 74 RLSLYPSGDSIRNGNGYISFYIILADPDNMPAG-FEINVSFKLFVYDHFQDEYLTIQDIN 132
Query: 61 GAVIRLHSMKRECGIDKLIPLQAFKEPSNGYLVDDSCVFGAEIFVIKPTGKGEALSIVKV 120
G V R + +K E G K I L FKEPSNGYL++DSCVFGAEIFVI+ T KG+ L +V+
Sbjct: 133 GRVRRFNKVKIEHGFTKFISLGTFKEPSNGYLLNDSCVFGAEIFVIRNTNKGDRLLLVQE 192
Query: 121 PAQAGNILRWKIPNFSDLRDPEYYSSEFNAGGREW 155
PA + WKI NFS L D + +S +F+AGGR+W
Sbjct: 193 PAHRFHT--WKIHNFSKL-DKKIFSHQFSAGGRKW 224
>gi|224140755|ref|XP_002323744.1| predicted protein [Populus trichocarpa]
gi|222866746|gb|EEF03877.1| predicted protein [Populus trichocarpa]
Length = 290
Score = 134 bits (338), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 68/155 (43%), Positives = 97/155 (62%), Gaps = 5/155 (3%)
Query: 1 RLILYPNGNKKGQGTGHISLYLALDESTYFPNNPWEVFVNFTFFVQDRIKNEYLAIRYDD 60
+L+LYPNG+K G G+ISLYL + ++T FP WE+ F FV D+++++YL I D
Sbjct: 34 KLVLYPNGDKSRNGDGYISLYLVIADTTGFPAG-WEINAIFKLFVYDQLQDKYLTI--GD 90
Query: 61 GAVIRLHSMKRECGIDKLIPLQAFKEPSNGYLVDDSCVFGAEIFVIKPTGKGEALSIVKV 120
G + R ++ + G +++PL F SNGYL+ DSCVFGAE+FV+K GKGE S++K
Sbjct: 91 GRLRRFCAIMNKWGFPQMLPLSTFNNASNGYLIGDSCVFGAEVFVVKSEGKGEHFSMIKD 150
Query: 121 PAQAGNILRWKIPNFSDLRDPEYYSSEFNAGGREW 155
P+ W++ FS L YYS + AGG EW
Sbjct: 151 PSDG--TFTWEVQYFSGLTGEFYYSQVYLAGGHEW 183
Score = 47.8 bits (112), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 27/98 (27%), Positives = 55/98 (56%), Gaps = 6/98 (6%)
Query: 1 RLILYPNGNKKGQGTGHISLYLALDESTYFPNNPWEVFVNFTFFVQDRIKNEYLAIRYDD 60
+L L+P G+ K +G ++SL+L LD+ T + W++FV FT ++D++++ + ++
Sbjct: 184 KLKLFPKGHIKQRGK-YLSLFLELDDCTK-SHTGWKLFVEFTLRIKDQVQSHH----HEK 237
Query: 61 GAVIRLHSMKRECGIDKLIPLQAFKEPSNGYLVDDSCV 98
+ + G+ I L K PSN ++V+D+ +
Sbjct: 238 TIHKWFSASENNWGLVSFISLSDIKNPSNNFIVNDTLI 275
>gi|224140753|ref|XP_002323743.1| predicted protein [Populus trichocarpa]
gi|222866745|gb|EEF03876.1| predicted protein [Populus trichocarpa]
Length = 311
Score = 133 bits (335), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 68/155 (43%), Positives = 97/155 (62%), Gaps = 5/155 (3%)
Query: 1 RLILYPNGNKKGQGTGHISLYLALDESTYFPNNPWEVFVNFTFFVQDRIKNEYLAIRYDD 60
+L+LYPNG+K G G+ISLYL + ++T FP WE+ F FV D+++++YL I D
Sbjct: 55 KLVLYPNGDKSRNGDGYISLYLVIADTTGFPPG-WEINAIFKLFVYDQLQDKYLTI--GD 111
Query: 61 GAVIRLHSMKRECGIDKLIPLQAFKEPSNGYLVDDSCVFGAEIFVIKPTGKGEALSIVKV 120
G + R ++ + G +++PL F SNGYL+ DSCVFGAE+FV+K GKGE S++K
Sbjct: 112 GRLRRFCAIMNKWGFPQMLPLSTFNNASNGYLIGDSCVFGAEVFVVKSEGKGEHFSMIKD 171
Query: 121 PAQAGNILRWKIPNFSDLRDPEYYSSEFNAGGREW 155
P+ W++ FS L YYS + AGG EW
Sbjct: 172 PSDG--TFTWEVQYFSGLTGEFYYSQVYLAGGHEW 204
Score = 50.1 bits (118), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 27/98 (27%), Positives = 57/98 (58%), Gaps = 6/98 (6%)
Query: 1 RLILYPNGNKKGQGTGHISLYLALDESTYFPNNPWEVFVNFTFFVQDRIKNEYLAIRYDD 60
+L L+PNG+ K +G ++SL++ LD+ T + + W++FV FT ++D++++++ +
Sbjct: 205 KLKLFPNGHIKQRGK-YLSLFVELDDCTNY-HTGWKLFVEFTLRIKDQVQSQHREKTFHK 262
Query: 61 GAVIRLHSMKRECGIDKLIPLQAFKEPSNGYLVDDSCV 98
+ + G+ I L K PSN ++V+D+ +
Sbjct: 263 W----FSASENNWGLVSFISLSDIKNPSNNFIVNDTLI 296
>gi|147827577|emb|CAN66220.1| hypothetical protein VITISV_024779 [Vitis vinifera]
Length = 341
Score = 133 bits (335), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 65/140 (46%), Positives = 89/140 (63%), Gaps = 3/140 (2%)
Query: 1 RLILYPNGNKKGQGTGHISLYLALDESTYFPNNPWEVFVNFTFFVQDRIKNEYLAIRYDD 60
RL LYPNGN K G G+ISLYLA+ ++ P WEV VNF FV + ++YL ++
Sbjct: 80 RLCLYPNGNIKSNGKGYISLYLAIADTKMLPLG-WEVNVNFKLFVFNHKHDQYLTVQDAG 138
Query: 61 GAVIRLHSMKRECGIDKLIPLQAFKEPSNGYLVDDSCVFGAEIFVIKPTGKGEALSIVKV 120
G + R + MK +CG + + L +P NGYL++DSC+FGAE+FVIK +GKGE LS++K
Sbjct: 139 GKLTRFNVMKTQCGFPQFLSLDVLNDPCNGYLMEDSCIFGAEVFVIKYSGKGECLSMIKE 198
Query: 121 PAQAGNILRWKIPNFSDLRD 140
P W I NFS L++
Sbjct: 199 PVDG--TFTWVIENFSTLKE 216
>gi|21537273|gb|AAM61614.1| unknown [Arabidopsis thaliana]
Length = 309
Score = 132 bits (331), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 71/158 (44%), Positives = 100/158 (63%), Gaps = 10/158 (6%)
Query: 1 RLILYPNGNKKGQGTGHISLYLAL-DESTYFPNNPWEVFVNFTFFVQDRIKNEYLAIRYD 59
+L+LYPNGNK H+S+YLAL D S+ P WEV+ F ++ D+ K+ YL ++
Sbjct: 53 KLVLYPNGNKSKNTKDHVSVYLALADSSSLSPG--WEVYAVFRLYLLDQNKDNYLILQ-- 108
Query: 60 DGAVIRLHSMKRECGIDKLIPLQAFKEPSNGYLVDDSCVFGAEIFVIKP--TGKGEALSI 117
G R HS+KRE G DK IP F + SNGYL++D+C+FGA++FV K +G+GE LS+
Sbjct: 109 -GNERRFHSVKREWGFDKFIPTGTFSDSSNGYLMEDTCMFGADVFVSKERRSGRGECLSM 167
Query: 118 VKVPAQAGNILRWKIPNFSDLRDPEYYSSEFNAGGREW 155
+K + ++ WKI NFS L Y S+ F AG R+W
Sbjct: 168 IKDATSSKHV--WKIENFSKLDKESYDSNAFFAGDRKW 203
Score = 51.6 bits (122), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 32/106 (30%), Positives = 57/106 (53%), Gaps = 8/106 (7%)
Query: 1 RLILYPNGNKKGQGTGHISLYLALDESTYFPNNPWEVFVNFTFFVQDRIKNEYLAIRYDD 60
++ YP G K+G GT H+S+YL L + + ++FV FT + D+++ ++A
Sbjct: 204 KIEFYPTGTKQGTGT-HLSIYLTLVDPETISDGT-KIFVEFTIRIFDQLQGRHIA----- 256
Query: 61 GAVIRLHSM-KRECGIDKLIPLQAFKEPSNGYLVDDSCVFGAEIFV 105
G V + S E G K + + F +P++G L+ D C+ A++ V
Sbjct: 257 GKVTKWFSRSSSEHGWVKYVSMVYFTQPNSGLLLKDVCLVEADVCV 302
>gi|449441502|ref|XP_004138521.1| PREDICTED: BTB/POZ and MATH domain-containing protein 3-like
[Cucumis sativus]
Length = 316
Score = 131 bits (329), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 73/158 (46%), Positives = 94/158 (59%), Gaps = 6/158 (3%)
Query: 1 RLILYPNGNKKGQGTGHISLYLALDESTYFPNNPWEVFVNFTFFVQDRIKNEYLAIRYDD 60
+L+L+P+G+K G HISLYL + T WEVFV + F+ D+ K+ YL +
Sbjct: 55 KLVLHPHGDKSKNGNDHISLYLEI-AGTDSLQPSWEVFVVYRLFLLDQNKDNYLTVEDGK 113
Query: 61 GAVIRLHSMKRECGIDKLIPLQAFKEPSNGYLVDDSCVFGAEIFVIKPT---GKGEALSI 117
R MK++ G DK I L+ FKE SNGYLVDD CVFGAE+FV K GKGE LS+
Sbjct: 114 WKPRRFRGMKKQWGFDKYISLKEFKESSNGYLVDDVCVFGAEVFVCKENFKGGKGECLSM 173
Query: 118 VKVPAQAGNILRWKIPNFSDLRDPEYYSSEFNAGGREW 155
+K P ++ WKI NFS L Y S FNAG ++W
Sbjct: 174 IKSPVTYKHV--WKIDNFSKLDAESYESKIFNAGDKKW 209
Score = 44.7 bits (104), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 33/108 (30%), Positives = 57/108 (52%), Gaps = 10/108 (9%)
Query: 1 RLILYPNGNKKGQGTGHISLYLAL-DESTYFPNNPWEVFVNFTFFVQDRIKNEYLAIRYD 59
++ +YP G+ G+G+ H+S YL L D + P +++ T +QD+I + ++
Sbjct: 210 KIRVYPKGHGSGEGS-HLSPYLELADPAALHPAT--KIYAEVTLRLQDQIYS-----KHH 261
Query: 60 DGAVIRLHSMKR-ECGIDKLIPLQAFKEPSNGYLVDDSCVFGAEIFVI 106
G V S E G + I L FK+P+ G+LV D+ + AE+ +I
Sbjct: 262 SGKVSYWFSASNPEVGGPRFILLDNFKQPNIGFLVKDAFIVEAEVSII 309
>gi|449522688|ref|XP_004168358.1| PREDICTED: BTB/POZ and MATH domain-containing protein 3-like
[Cucumis sativus]
Length = 316
Score = 131 bits (329), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 73/158 (46%), Positives = 94/158 (59%), Gaps = 6/158 (3%)
Query: 1 RLILYPNGNKKGQGTGHISLYLALDESTYFPNNPWEVFVNFTFFVQDRIKNEYLAIRYDD 60
+L+L+P+G+K G HISLYL + T WEVFV + F+ D+ K+ YL +
Sbjct: 55 KLVLHPHGDKSKNGNDHISLYLEI-AGTDSLQPSWEVFVVYRLFLLDQNKDNYLTVEDGK 113
Query: 61 GAVIRLHSMKRECGIDKLIPLQAFKEPSNGYLVDDSCVFGAEIFVIKPT---GKGEALSI 117
R MK++ G DK I L+ FKE SNGYLVDD CVFGAE+FV K GKGE LS+
Sbjct: 114 WKPRRFRGMKKQWGFDKYISLKEFKESSNGYLVDDVCVFGAEVFVCKENFKGGKGECLSM 173
Query: 118 VKVPAQAGNILRWKIPNFSDLRDPEYYSSEFNAGGREW 155
+K P ++ WKI NFS L Y S FNAG ++W
Sbjct: 174 IKSPVTYKHV--WKIDNFSKLDAESYESKIFNAGDKKW 209
Score = 44.7 bits (104), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 34/108 (31%), Positives = 57/108 (52%), Gaps = 10/108 (9%)
Query: 1 RLILYPNGNKKGQGTGHISLYLAL-DESTYFPNNPWEVFVNFTFFVQDRIKNEYLAIRYD 59
++ +YP G+ G+G+ H+S YL L D + P +++ T +QD+I + ++
Sbjct: 210 KIRVYPKGHGSGEGS-HLSPYLELADPAALHPAT--KIYAEVTLRLQDQIYS-----KHH 261
Query: 60 DGAVIRLHSMKR-ECGIDKLIPLQAFKEPSNGYLVDDSCVFGAEIFVI 106
G V S E G + I L FK+P+ G+LV D+ + AE+ VI
Sbjct: 262 SGKVSYWFSASNPEVGGPRFILLDNFKQPNIGFLVKDAFIVEAEVNVI 309
>gi|297830352|ref|XP_002883058.1| hypothetical protein ARALYDRAFT_479214 [Arabidopsis lyrata subsp.
lyrata]
gi|297328898|gb|EFH59317.1| hypothetical protein ARALYDRAFT_479214 [Arabidopsis lyrata subsp.
lyrata]
Length = 309
Score = 131 bits (329), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 70/158 (44%), Positives = 100/158 (63%), Gaps = 10/158 (6%)
Query: 1 RLILYPNGNKKGQGTGHISLYLAL-DESTYFPNNPWEVFVNFTFFVQDRIKNEYLAIRYD 59
+L+LYPNGNK H+S+YLAL D S+ P WEV+ F ++ D+ K+ YL ++
Sbjct: 53 KLVLYPNGNKSKNTKDHVSVYLALADSSSLSPG--WEVYAVFRLYLLDQNKDNYLILQ-- 108
Query: 60 DGAVIRLHSMKRECGIDKLIPLQAFKEPSNGYLVDDSCVFGAEIFVIKP--TGKGEALSI 117
G R H++KRE G DK IP F + SNGYL++D+C+FGA++FV K +G+GE LS+
Sbjct: 109 -GNERRFHAVKREWGFDKFIPTGTFSDASNGYLMEDTCMFGADVFVSKERRSGRGECLSM 167
Query: 118 VKVPAQAGNILRWKIPNFSDLRDPEYYSSEFNAGGREW 155
+K + ++ WKI NFS L Y S+ F AG R+W
Sbjct: 168 IKDATSSKHV--WKIENFSKLDKESYDSNAFFAGDRKW 203
Score = 51.6 bits (122), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 32/106 (30%), Positives = 57/106 (53%), Gaps = 8/106 (7%)
Query: 1 RLILYPNGNKKGQGTGHISLYLALDESTYFPNNPWEVFVNFTFFVQDRIKNEYLAIRYDD 60
++ YP G K+G GT H+S+YL L + + ++FV FT + D+++ ++A
Sbjct: 204 KVRFYPTGTKQGTGT-HLSIYLTLVDPETISDGT-KIFVEFTIRIFDQLQGRHIA----- 256
Query: 61 GAVIRLHSM-KRECGIDKLIPLQAFKEPSNGYLVDDSCVFGAEIFV 105
G V + S E G K + + F +P++G L+ D C+ A++ V
Sbjct: 257 GKVTKWFSRSSSEHGWVKYVSMVYFTQPNSGLLLKDVCLVEADVCV 302
>gi|357512847|ref|XP_003626712.1| Ubiquitin carboxyl-terminal hydrolase [Medicago truncatula]
gi|355520734|gb|AET01188.1| Ubiquitin carboxyl-terminal hydrolase [Medicago truncatula]
Length = 485
Score = 125 bits (313), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 69/168 (41%), Positives = 93/168 (55%), Gaps = 14/168 (8%)
Query: 1 RLILYPNGNKKGQGTGHISLYLALDESTYFPNNPWEVFVNFTFFVQDRIKNEYLAIRYDD 60
+L+LYP+GN K G GH+SLYLA+ ++ WEV+VNF FV D N YL I+ D
Sbjct: 67 KLVLYPSGNSKRNGKGHVSLYLAIADTEKLSRG-WEVYVNFKLFVLDYNCNNYLTIQDAD 125
Query: 61 GAVIRLHSMKRECGIDKLIPLQAFKEPSNGYLVDDSCVFGAEIFVIKPTGKGEALSIV-- 118
G V + + MK E G D+LI L+ +P NGYLV+DSCVFGAE+ VI + K E+LS+
Sbjct: 126 GVVRKFNEMKSEWGFDQLISLEVLFDPCNGYLVEDSCVFGAEVLVIGHSAKSESLSMAVN 185
Query: 119 KVPAQAGNI----------LRWKIPNFSDLRDPEYY-SSEFNAGGREW 155
+P + L W++ N + S F G REW
Sbjct: 186 TLPVKPPIGPPVEPPTYGSLTWRLQNLLTWAASDVVISKTFTVGDREW 233
Score = 41.6 bits (96), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 35/136 (25%), Positives = 57/136 (41%), Gaps = 16/136 (11%)
Query: 2 LILYPNGNKKGQGTG-HISLYLALDESTYFPNNPWEVFVNFTFFVQDRIKNEYLAIRYDD 60
L + P G+ G ++SL+L L + FP+N V +F + D++ N++ Y+
Sbjct: 235 LQVTPKGDSADGIRGKYLSLFLQLTDCERFPSNT-TVNASFKLKILDQLHNQH----YEK 289
Query: 61 GAVIRLHSMKRECGIDKLIPLQAFKEPSNGYLVDDSCVFGAEIFVIKPTGKGEALSIVKV 120
+ ++ G K I L E NGY DD + EI ++I+
Sbjct: 290 TENSSFCASHKQRGYSKFISLSELYEVKNGYFKDDDIILEVEIL---------KMAIIME 340
Query: 121 PAQAGNILRWKIPNFS 136
P N WK+ N S
Sbjct: 341 PLAYEN-FTWKLENLS 355
>gi|255636923|gb|ACU18794.1| unknown [Glycine max]
Length = 276
Score = 123 bits (308), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 70/157 (44%), Positives = 94/157 (59%), Gaps = 5/157 (3%)
Query: 1 RLILYPNGNKKGQGTGHISLYLALDESTYFPNNPWEVFVNFTFFVQDRIKNEYLAIRYDD 60
+L+LYP+GNK HISLYLALD+++ ++ WE++VNF FF+ D+ + YL
Sbjct: 50 KLVLYPSGNKSKNIREHISLYLALDDTSSL-HHGWEIYVNFRFFLHDQTNDNYLVGPDTV 108
Query: 61 GAVIRLHSMKRECGIDKLIPLQAFKEPSNGYLVDDSCVFGAEIFVIK--PTGKGEALSIV 118
R H MK E GID+ IPL+ F S GYLVDD+C FGAE+FV K TGKGE L ++
Sbjct: 109 RNERRFHKMKAEWGIDQFIPLRDFNLASKGYLVDDTCAFGAEVFVCKERSTGKGECLVMM 168
Query: 119 KVPAQAGNILRWKIPNFSDLRDPEYYSSEFNAGGREW 155
K ++ ++ N S L Y S FNAG +W
Sbjct: 169 KEAILYKHL--YEFDNLSKLDLECYDSKPFNAGNFKW 203
>gi|356519881|ref|XP_003528597.1| PREDICTED: uncharacterized protein LOC100779090 [Glycine max]
Length = 310
Score = 123 bits (308), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 70/157 (44%), Positives = 94/157 (59%), Gaps = 5/157 (3%)
Query: 1 RLILYPNGNKKGQGTGHISLYLALDESTYFPNNPWEVFVNFTFFVQDRIKNEYLAIRYDD 60
+L+LYP+GNK HISLYLALD+++ ++ WE++VNF FF+ D+ + YL
Sbjct: 50 KLVLYPSGNKSKNIREHISLYLALDDTSSL-HHGWEIYVNFRFFLHDQTNDNYLVGPDTV 108
Query: 61 GAVIRLHSMKRECGIDKLIPLQAFKEPSNGYLVDDSCVFGAEIFVIK--PTGKGEALSIV 118
R H MK E GID+ IPL+ F S GYLVDD+C FGAE+FV K TGKGE L ++
Sbjct: 109 RNERRFHKMKAEWGIDQFIPLRDFNLASKGYLVDDTCAFGAEVFVCKERSTGKGECLVMM 168
Query: 119 KVPAQAGNILRWKIPNFSDLRDPEYYSSEFNAGGREW 155
K ++ ++ N S L Y S FNAG +W
Sbjct: 169 KEAILYKHL--YEFDNLSKLDLECYDSKPFNAGNFKW 203
Score = 38.9 bits (89), Expect = 0.82, Method: Compositional matrix adjust.
Identities = 35/117 (29%), Positives = 56/117 (47%), Gaps = 11/117 (9%)
Query: 1 RLILYPNGNKKGQGTGHISLYLAL-DESTYFPNNPWEVFVNFTFFVQDRIKNEYLAIRYD 59
++ LYP G K + ++SLYLAL D S P + +++ T RI ++ A +
Sbjct: 204 KIKLYPKG-KGAELGNYLSLYLALADPSALSPCS--KIYAQITL----RILDQKQAKHHF 256
Query: 60 DGAVIRLHSMKRECGIDKLIPLQAFKEPSNGYLVDDSCVFGAEIFVIKPTGKGEALS 116
A + E G +P+ F + GY+V DSC AE+ ++ G +ALS
Sbjct: 257 GKANYWFSASSHENGAAIFMPINNFTNQNFGYVVKDSCFVEAEVIIL---GVVDALS 310
>gi|357479139|ref|XP_003609855.1| Ubiquitin carboxyl-terminal hydrolase [Medicago truncatula]
gi|355510910|gb|AES92052.1| Ubiquitin carboxyl-terminal hydrolase [Medicago truncatula]
Length = 311
Score = 123 bits (308), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 69/157 (43%), Positives = 94/157 (59%), Gaps = 5/157 (3%)
Query: 1 RLILYPNGNKKGQGTGHISLYLALDESTYFPNNPWEVFVNFTFFVQDRIKNEYLAIRYDD 60
+L+LYP+GNK HISLYLAL+ES+ + WE++VNF FV D+ + YL ++ D
Sbjct: 51 KLVLYPSGNKSKNVKDHISLYLALEESSSL-HPGWEIYVNFKLFVYDQNNDNYLVLQDDV 109
Query: 61 GAVIRLHSMKRECGIDKLIPLQAFKEPSNGYLVDDSCVFGAEIFVIKP--TGKGEALSIV 118
R H MK E G D+ IPL+ F S GYL+DD C FGAE+FV + TGKGE+L ++
Sbjct: 110 KKEKRFHRMKVEWGFDQFIPLKDFNIGSKGYLLDDICAFGAEVFVCRENYTGKGESLIMM 169
Query: 119 KVPAQAGNILRWKIPNFSDLRDPEYYSSEFNAGGREW 155
K ++ W+I +FS L S FN G +W
Sbjct: 170 KDALPYKHV--WEIKDFSKLDSECCDSKPFNVGNYKW 204
>gi|255556544|ref|XP_002519306.1| nucleic acid binding protein, putative [Ricinus communis]
gi|223541621|gb|EEF43170.1| nucleic acid binding protein, putative [Ricinus communis]
Length = 455
Score = 123 bits (308), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 68/157 (43%), Positives = 93/157 (59%), Gaps = 8/157 (5%)
Query: 1 RLILYPNGNKKGQGTGHISLYLALDESTYFPNNPWEVFVNFTFFVQDRIKNEYLAIRYDD 60
+L+LYP GNK H+SLY+A+ +S+ WEV V F F+ D+I++ YL +
Sbjct: 199 KLVLYPKGNKSKNVMEHLSLYIAMADSSNLQLG-WEVHVVFRLFLLDQIRDNYLIL---P 254
Query: 61 GAVIRLHSMKRECGIDKLIPLQAFKEPSNGYLVDDSCVFGAEIFVIKP--TGKGEALSIV 118
G R H + E G D+LIPL K+ NGYLV+D+CVFGAE+FV K TGKGE LS++
Sbjct: 255 GKECRFHGFRLEWGFDQLIPLATLKDTKNGYLVEDTCVFGAEVFVRKESCTGKGECLSMI 314
Query: 119 KVPAQAGNILRWKIPNFSDLRDPEYYSSEFNAGGREW 155
K + + N+ W+ NFS L S F AG + W
Sbjct: 315 KSSSTSKNL--WRFENFSKLDAECNDSKTFVAGDQRW 349
Score = 51.2 bits (121), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 34/109 (31%), Positives = 53/109 (48%), Gaps = 6/109 (5%)
Query: 1 RLILYPNGNKKGQGTGHISLYLALDESTYFPNNPWEVFVNFTFFVQDRIKNEYLAIRYDD 60
++ LYP G G GT H+SL+LAL + T +++ +FT + D+ + +L +
Sbjct: 350 KIQLYPKGKGLGSGT-HLSLFLALADLTAITPG-FKILADFTLRILDQSRGSHLFGK--- 404
Query: 61 GAVIRLHSMKRECGIDKLIPLQAFKEPSNGYLVDDSCVFGAEIFVIKPT 109
A + CG + PL SN YL D+C+ AEI V+ T
Sbjct: 405 -ANFWFSASSSVCGWSRFYPLDQLYASSNAYLFKDTCLGEAEITVLGIT 452
>gi|18401489|ref|NP_566576.1| TRAF-like family protein [Arabidopsis thaliana]
gi|332642426|gb|AEE75947.1| TRAF-like family protein [Arabidopsis thaliana]
Length = 309
Score = 121 bits (303), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 68/157 (43%), Positives = 99/157 (63%), Gaps = 8/157 (5%)
Query: 1 RLILYPNGNKKGQGTGHISLYLALDESTYFPNNPWEVFVNFTFFVQDRIKNEYLAIRYDD 60
+L+LYPNGNK H+S+YL+L +S+ WEV+ F ++ D+ K+ YL ++
Sbjct: 53 KLVLYPNGNKSKNTKDHVSVYLSLADSSSLSPG-WEVYAVFRLYLLDQNKDNYLILQ--- 108
Query: 61 GAVIRLHSMKRECGIDKLIPLQAFKEPSNGYLVDDSCVFGAEIFVIKP--TGKGEALSIV 118
G R HS+KRE G DK IP F + SNGYL++D+C+FGA++FV K +G+GE LS++
Sbjct: 109 GNERRFHSVKREWGFDKFIPTGTFSDASNGYLMEDTCMFGADVFVSKERRSGRGECLSMI 168
Query: 119 KVPAQAGNILRWKIPNFSDLRDPEYYSSEFNAGGREW 155
K + ++ WKI NFS L Y S+ F AG R+W
Sbjct: 169 KDATSSKHV--WKIENFSKLDKESYDSNAFFAGDRKW 203
Score = 51.6 bits (122), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 32/106 (30%), Positives = 57/106 (53%), Gaps = 8/106 (7%)
Query: 1 RLILYPNGNKKGQGTGHISLYLALDESTYFPNNPWEVFVNFTFFVQDRIKNEYLAIRYDD 60
++ YP G K+G GT H+S+YL L + + ++FV FT + D+++ ++A
Sbjct: 204 KIEFYPTGTKQGTGT-HLSIYLTLVDPETISDGT-KIFVEFTIRIFDQLQGRHIA----- 256
Query: 61 GAVIRLHSM-KRECGIDKLIPLQAFKEPSNGYLVDDSCVFGAEIFV 105
G V + S E G K + + F +P++G L+ D C+ A++ V
Sbjct: 257 GKVTKWFSRSSSEHGWVKYVSMVYFTQPNSGLLLKDVCLVEADVCV 302
>gi|11994555|dbj|BAB02742.1| unnamed protein product [Arabidopsis thaliana]
Length = 304
Score = 120 bits (302), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 68/157 (43%), Positives = 99/157 (63%), Gaps = 8/157 (5%)
Query: 1 RLILYPNGNKKGQGTGHISLYLALDESTYFPNNPWEVFVNFTFFVQDRIKNEYLAIRYDD 60
+L+LYPNGNK H+S+YL+L +S+ WEV+ F ++ D+ K+ YL ++
Sbjct: 48 KLVLYPNGNKSKNTKDHVSVYLSLADSSSLSPG-WEVYAVFRLYLLDQNKDNYLILQ--- 103
Query: 61 GAVIRLHSMKRECGIDKLIPLQAFKEPSNGYLVDDSCVFGAEIFVIKP--TGKGEALSIV 118
G R HS+KRE G DK IP F + SNGYL++D+C+FGA++FV K +G+GE LS++
Sbjct: 104 GNERRFHSVKREWGFDKFIPTGTFSDASNGYLMEDTCMFGADVFVSKERRSGRGECLSMI 163
Query: 119 KVPAQAGNILRWKIPNFSDLRDPEYYSSEFNAGGREW 155
K + ++ WKI NFS L Y S+ F AG R+W
Sbjct: 164 KDATSSKHV--WKIENFSKLDKESYDSNAFFAGDRKW 198
Score = 51.6 bits (122), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 32/106 (30%), Positives = 57/106 (53%), Gaps = 8/106 (7%)
Query: 1 RLILYPNGNKKGQGTGHISLYLALDESTYFPNNPWEVFVNFTFFVQDRIKNEYLAIRYDD 60
++ YP G K+G GT H+S+YL L + + ++FV FT + D+++ ++A
Sbjct: 199 KIEFYPTGTKQGTGT-HLSIYLTLVDPETISDGT-KIFVEFTIRIFDQLQGRHIA----- 251
Query: 61 GAVIRLHSM-KRECGIDKLIPLQAFKEPSNGYLVDDSCVFGAEIFV 105
G V + S E G K + + F +P++G L+ D C+ A++ V
Sbjct: 252 GKVTKWFSRSSSEHGWVKYVSMVYFTQPNSGLLLKDVCLVEADVCV 297
>gi|18421006|ref|NP_568483.1| TRAF-like family protein [Arabidopsis thaliana]
gi|13877741|gb|AAK43948.1|AF370133_1 unknown protein [Arabidopsis thaliana]
gi|3319350|gb|AAC26239.1| F9D12.8 gene product [Arabidopsis thaliana]
gi|15293179|gb|AAK93700.1| unknown protein [Arabidopsis thaliana]
gi|332006159|gb|AED93542.1| TRAF-like family protein [Arabidopsis thaliana]
Length = 351
Score = 120 bits (301), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 66/155 (42%), Positives = 87/155 (56%), Gaps = 5/155 (3%)
Query: 1 RLILYPNGNKKGQGTGHISLYLALDESTYFPNNPWEVFVNFTFFVQDRIKNEYLAIRYDD 60
RL+LY GN KG HISLY ++E+ P WEV V+ FV +R +YL++ D
Sbjct: 93 RLVLYVKGNPKGGINNHISLYARIEETETLPRG-WEVNVDLKLFVHNRKLKKYLSV--TD 149
Query: 61 GAVIRLHSMKRECGIDKLIPLQAFKEPSNGYLVDDSCVFGAEIFVIKPTGKGEALSIVKV 120
G V R + K+E G +LI L F + GYLV D+ FGAEIF++ PT K E ++ +
Sbjct: 150 GTVKRYNDAKKEWGFTQLISLPTFYNANEGYLVQDTASFGAEIFIVNPTEKQEKVTFISN 209
Query: 121 PAQAGNILRWKIPNFSDLRDPEYYSSEFNAGGREW 155
P N+ WKI FS L D YYS +F G R W
Sbjct: 210 PPD--NVFTWKILRFSTLEDKFYYSDDFLVGDRYW 242
>gi|449458329|ref|XP_004146900.1| PREDICTED: uncharacterized protein LOC101204482 [Cucumis sativus]
gi|449530568|ref|XP_004172266.1| PREDICTED: uncharacterized LOC101204482 [Cucumis sativus]
Length = 314
Score = 115 bits (289), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 67/157 (42%), Positives = 96/157 (61%), Gaps = 10/157 (6%)
Query: 1 RLILYPNGNKKGQGTGHISLYLALDESTYFPNNP--WEVFVNFTFFVQDRIKNEYLAIRY 58
+LILYPNGN++ + HISL+LA+ ST N P WE+ V F FF+ D+I++ YL I+
Sbjct: 64 KLILYPNGNEEVED--HISLFLAV--STNDNNLPLGWELRVIFRFFIFDQIRDNYLTIQ- 118
Query: 59 DDGAVIRLHSMKRECGIDKLIPLQAFKEPSNGYLVDDSCVFGAEIFVIKPTGKGEALSIV 118
DG + + MK E G LI F + S+G+LV + C FG E+ ++K + KGE L+I+
Sbjct: 119 -DGKMRKYSKMKSEHGFTHLISHNVFNKASSGFLVSNCCTFGVEVSILKASNKGERLTIL 177
Query: 119 KVPAQAGNILRWKIPNFSDLRDPEYYSSEFNAGGREW 155
K P Q + W + +FS L+ P Y S FN GR+W
Sbjct: 178 KEPQQ--DTYFWTLYSFSALKQPFYISEPFNVKGRKW 212
>gi|297809145|ref|XP_002872456.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297318293|gb|EFH48715.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
Length = 309
Score = 112 bits (281), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 57/156 (36%), Positives = 91/156 (58%), Gaps = 6/156 (3%)
Query: 1 RLILYPNGNKKGQGTGHISLYLALDESTYFPNNPWEVFVNFTFFVQDRIKNEYLAIRYDD 60
R+I+YP GN K G+G IS+Y+ +D ++ P EV+ N FFV ++ +N+Y I+ D
Sbjct: 55 RMIIYPKGNDKDNGSGFISMYVEIDSTSLISTTPTEVYANLQFFVFNKKENKYFTIQ--D 112
Query: 61 GAVIRLHSMKRECGIDKLIPLQAFKEPSNGYLVD-DSCVFGAEIFVIKPTGKGEALSIVK 119
++++ G+ +++ L F + +NGYL D D C FG +I V+ P K E LS VK
Sbjct: 113 VESKPFNTLRTMWGLPQVLALDTFNDRNNGYLFDGDHCEFGVDIIVVPPPTKWEMLSFVK 172
Query: 120 VPAQAGNILRWKIPNFSDLRDPEYYSSEFNAGGREW 155
+P W + NFS+++D Y S F+ GG++W
Sbjct: 173 LPYPK---FSWIVKNFSEIKDNPYTSDSFSKGGKKW 205
>gi|18421009|ref|NP_568484.1| TRAF-like family protein [Arabidopsis thaliana]
gi|16604304|gb|AAL24158.1| AT5g26280/T19G15_130 [Arabidopsis thaliana]
gi|27363366|gb|AAO11602.1| At5g26280/T19G15_130 [Arabidopsis thaliana]
gi|332006163|gb|AED93546.1| TRAF-like family protein [Arabidopsis thaliana]
Length = 350
Score = 112 bits (280), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 63/155 (40%), Positives = 86/155 (55%), Gaps = 5/155 (3%)
Query: 1 RLILYPNGNKKGQGTGHISLYLALDESTYFPNNPWEVFVNFTFFVQDRIKNEYLAIRYDD 60
RL+LY NGNK G HISLY ++E+ P WEV V+ FV + ++YL + D
Sbjct: 92 RLVLYVNGNKNDGGNDHISLYARIEETNSLPLG-WEVNVDLKLFVHNGKLHKYLTV--TD 148
Query: 61 GAVIRLHSMKRECGIDKLIPLQAFKEPSNGYLVDDSCVFGAEIFVIKPTGKGEALSIVKV 120
G V R ++ K+E G +LIP F + GYL D+ FGAEIF++KP + E ++ +
Sbjct: 149 GLVKRYNNAKKEWGFGQLIPRSTFYNANEGYLDQDTGSFGAEIFIVKPAQQQEKVTFISN 208
Query: 121 PAQAGNILRWKIPNFSDLRDPEYYSSEFNAGGREW 155
P N+ WKI FS L D YYS +F R W
Sbjct: 209 PPN--NVFTWKILRFSTLEDKFYYSDDFLVEDRYW 241
>gi|3319349|gb|AAC26238.1| F9D12.7 gene product [Arabidopsis thaliana]
Length = 333
Score = 112 bits (280), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 63/155 (40%), Positives = 86/155 (55%), Gaps = 5/155 (3%)
Query: 1 RLILYPNGNKKGQGTGHISLYLALDESTYFPNNPWEVFVNFTFFVQDRIKNEYLAIRYDD 60
RL+LY NGNK G HISLY ++E+ P WEV V+ FV + ++YL + D
Sbjct: 111 RLVLYVNGNKNDGGNDHISLYARIEETNSLPLG-WEVNVDLKLFVHNGKLHKYLTV--TD 167
Query: 61 GAVIRLHSMKRECGIDKLIPLQAFKEPSNGYLVDDSCVFGAEIFVIKPTGKGEALSIVKV 120
G V R ++ K+E G +LIP F + GYL D+ FGAEIF++KP + E ++ +
Sbjct: 168 GLVKRYNNAKKEWGFGQLIPRSTFYNANEGYLDQDTGSFGAEIFIVKPAQQQEKVTFISN 227
Query: 121 PAQAGNILRWKIPNFSDLRDPEYYSSEFNAGGREW 155
P N+ WKI FS L D YYS +F R W
Sbjct: 228 PPN--NVFTWKILRFSTLEDKFYYSDDFLVEDRYW 260
>gi|3319347|gb|AAC26236.1| F9D12.5 gene product [Arabidopsis thaliana]
Length = 392
Score = 108 bits (269), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 63/155 (40%), Positives = 86/155 (55%), Gaps = 6/155 (3%)
Query: 1 RLILYPNGNKKGQGTGHISLYLALDESTYFPNNPWEVFVNFTFFVQDRIKNEYLAIRYDD 60
RL+LY NGN G HISLY+ ++E+ Y P WEV V+ F+ + N+YLAI D
Sbjct: 135 RLVLYVNGNPNDSGNDHISLYVRIEETEYLPRG-WEVNVDLKLFIHNGKLNKYLAI--SD 191
Query: 61 GAVIRLHSMKRECGIDKLIPLQAFKEPSNGYLVDDSCVFGAEIFVIKPTGKGEALSIVKV 120
G + + KRE G +LIP F + GY+ D FGAEIF++KP + E ++ +
Sbjct: 192 GTLKLYNDAKREWGFGQLIPHVTFYN-TYGYIEQDIGSFGAEIFIVKPAQQQEKVTFISN 250
Query: 121 PAQAGNILRWKIPNFSDLRDPEYYSSEFNAGGREW 155
P N+ WKI +FS L D YYS +F R W
Sbjct: 251 PPT--NVFTWKILHFSILEDKFYYSDDFLVEDRYW 283
>gi|449528813|ref|XP_004171397.1| PREDICTED: uncharacterized protein LOC101232162, partial [Cucumis
sativus]
Length = 301
Score = 108 bits (269), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 60/139 (43%), Positives = 83/139 (59%), Gaps = 6/139 (4%)
Query: 1 RLILYPNGNKKGQGTGHISLYLALDESTYFPNNPWEVFVNFTFFVQDRIKNEYLAIRYDD 60
+L LYPNG+++ + HISLYL + EV FTF V D ++ +YL ++ D
Sbjct: 75 KLALYPNGDQRRDVSDHISLYLVMVGDNILSTTS-EVNAVFTFLVYDTLRGKYLTVQ--D 131
Query: 61 GAVIRLHSMKRECGIDKLIPLQAFKEPSNGYLVDDSCVFGAEIFVIKP-TGKGEALSIVK 119
G + R + K E GI+KL+PL FK+ SNG+LVDD CVFG +IFV+ GKGE S+++
Sbjct: 132 GKMRRFSATKTEWGIEKLLPLNTFKDASNGFLVDDCCVFGVDIFVMNSDVGKGEVFSLIE 191
Query: 120 VPAQAGNILRWKIPNFSDL 138
P WK+ NFS L
Sbjct: 192 QPNNYK--YTWKLNNFSKL 208
>gi|15240303|ref|NP_198002.1| TRAF-like family protein [Arabidopsis thaliana]
gi|332006166|gb|AED93549.1| TRAF-like family protein [Arabidopsis thaliana]
Length = 349
Score = 108 bits (269), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 63/155 (40%), Positives = 86/155 (55%), Gaps = 6/155 (3%)
Query: 1 RLILYPNGNKKGQGTGHISLYLALDESTYFPNNPWEVFVNFTFFVQDRIKNEYLAIRYDD 60
RL+LY NGN G HISLY+ ++E+ Y P WEV V+ F+ + N+YLAI D
Sbjct: 92 RLVLYVNGNPNDSGNDHISLYVRIEETEYLPRG-WEVNVDLKLFIHNGKLNKYLAI--SD 148
Query: 61 GAVIRLHSMKRECGIDKLIPLQAFKEPSNGYLVDDSCVFGAEIFVIKPTGKGEALSIVKV 120
G + + KRE G +LIP F + GY+ D FGAEIF++KP + E ++ +
Sbjct: 149 GTLKLYNDAKREWGFGQLIPHVTFYN-TYGYIEQDIGSFGAEIFIVKPAQQQEKVTFISN 207
Query: 121 PAQAGNILRWKIPNFSDLRDPEYYSSEFNAGGREW 155
P N+ WKI +FS L D YYS +F R W
Sbjct: 208 PPT--NVFTWKILHFSILEDKFYYSDDFLVEDRYW 240
>gi|297808655|ref|XP_002872211.1| hypothetical protein ARALYDRAFT_489472 [Arabidopsis lyrata subsp.
lyrata]
gi|297318048|gb|EFH48470.1| hypothetical protein ARALYDRAFT_489472 [Arabidopsis lyrata subsp.
lyrata]
Length = 350
Score = 108 bits (269), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 60/155 (38%), Positives = 85/155 (54%), Gaps = 5/155 (3%)
Query: 1 RLILYPNGNKKGQGTGHISLYLALDESTYFPNNPWEVFVNFTFFVQDRIKNEYLAIRYDD 60
RL+LY NGN G HISLY ++E+ P WEV V+ FV + ++YL + D
Sbjct: 92 RLVLYVNGNPNDGGNDHISLYARIEETESLPVG-WEVNVDLKLFVHNGKLHKYLTV--TD 148
Query: 61 GAVIRLHSMKRECGIDKLIPLQAFKEPSNGYLVDDSCVFGAEIFVIKPTGKGEALSIVKV 120
G V R ++ K+E G +LIP F + GY+ D+ FGAEIF++ P + E ++ +
Sbjct: 149 GTVKRYNNAKKEWGYGQLIPQSTFYNTNEGYIEQDTGSFGAEIFIVSPAQQQEKVTFISN 208
Query: 121 PAQAGNILRWKIPNFSDLRDPEYYSSEFNAGGREW 155
P N+ WKI +FS L D YYS +F R W
Sbjct: 209 PPN--NVFTWKILHFSTLEDKFYYSDDFLVEDRYW 241
>gi|21537388|gb|AAM61729.1| unknown [Arabidopsis thaliana]
Length = 350
Score = 107 bits (266), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 61/155 (39%), Positives = 84/155 (54%), Gaps = 5/155 (3%)
Query: 1 RLILYPNGNKKGQGTGHISLYLALDESTYFPNNPWEVFVNFTFFVQDRIKNEYLAIRYDD 60
RL+LY NGNK G HISLY ++E+ P WEV V+ FV + ++YL + D
Sbjct: 92 RLVLYVNGNKNDGGNDHISLYARIEETNSLPVG-WEVNVDLKLFVHNGKLHKYLTV--TD 148
Query: 61 GAVIRLHSMKRECGIDKLIPLQAFKEPSNGYLVDDSCVFGAEIFVIKPTGKGEALSIVKV 120
G V R ++ K+E G +LI F + GYL D+ FGAEIF++KP + E ++ +
Sbjct: 149 GLVKRYNNAKKEWGFGQLISRSTFYNANEGYLDQDTGSFGAEIFIVKPAQQQEKVTFISN 208
Query: 121 PAQAGNILRWKIPNFSDLRDPEYYSSEFNAGGREW 155
P N+ WKI S L D YYS +F R W
Sbjct: 209 PPN--NVFTWKILRXSTLEDKFYYSDDFLVEDRYW 241
>gi|15240301|ref|NP_198001.1| TRAF-like family protein [Arabidopsis thaliana]
gi|332006165|gb|AED93548.1| TRAF-like family protein [Arabidopsis thaliana]
Length = 333
Score = 104 bits (260), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 59/155 (38%), Positives = 86/155 (55%), Gaps = 8/155 (5%)
Query: 1 RLILYPNGNKKGQGTGHISLYLALDESTYFPNNPWEVFVNFTFFVQDRIKNEYLAIRYDD 60
RL+LY NGN+K G H+SLY + E+ P WEV V+ FV + N+YL +
Sbjct: 85 RLVLYVNGNEKDGGKDHVSLYAKIVETESLPVG-WEVNVDLKLFVYNGKLNKYLIV---- 139
Query: 61 GAVIRLHSMKRECGIDKLIPLQAFKEPSNGYLVDDSCVFGAEIFVIKPTGKGEALSIVKV 120
V R ++ +E G +LIP F + ++GY D+ FGAEI+++KP + E ++ +
Sbjct: 140 -TVKRYNNATKELGYGQLIPQSTFYDGNDGYREQDTGTFGAEIYIVKPAQQKEKVTFISN 198
Query: 121 PAQAGNILRWKIPNFSDLRDPEYYSSEFNAGGREW 155
P N+ WKI +FS L D Y S+EF G R W
Sbjct: 199 PPD--NVFTWKILHFSTLEDKVYQSNEFLVGDRYW 231
>gi|15240307|ref|NP_198004.1| TRAF-like family protein [Arabidopsis thaliana]
gi|332006168|gb|AED93551.1| TRAF-like family protein [Arabidopsis thaliana]
Length = 352
Score = 101 bits (252), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 57/157 (36%), Positives = 83/157 (52%), Gaps = 7/157 (4%)
Query: 1 RLILYPNGNKKGQGTGH--ISLYLALDESTYFPNNPWEVFVNFTFFVQDRIKNEYLAIRY 58
R +L+ NGN+ GH ++LY+ + E+ FP WEV V+ FV + ++YL +
Sbjct: 92 RFMLFVNGNQNDPDGGHENMALYVGIKETESFPRG-WEVNVDLKLFVHNEKLHKYLTV-- 148
Query: 59 DDGAVIRLHSMKRECGIDKLIPLQAFKEPSNGYLVDDSCVFGAEIFVIKPTGKGEALSIV 118
DG V R + K G LIP +P+ GY++ D+ FGAEI ++ P K E ++ +
Sbjct: 149 SDGTVKRYEAAKTYWGFGNLIPRTTLLDPNEGYILHDTLSFGAEISIVNPAEKQEKITFI 208
Query: 119 KVPAQAGNILRWKIPNFSDLRDPEYYSSEFNAGGREW 155
P N+ WKI FS L + YYS EF G R W
Sbjct: 209 SNPPD--NVFTWKILRFSTLENKFYYSDEFLVGDRYW 243
>gi|3319346|gb|AAC26235.1| F9D12.3 gene product [Arabidopsis thaliana]
Length = 402
Score = 101 bits (251), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 57/157 (36%), Positives = 83/157 (52%), Gaps = 7/157 (4%)
Query: 1 RLILYPNGNKKGQGTGH--ISLYLALDESTYFPNNPWEVFVNFTFFVQDRIKNEYLAIRY 58
R +L+ NGN+ GH ++LY+ + E+ FP WEV V+ FV + ++YL +
Sbjct: 107 RFMLFVNGNQNDPDGGHENMALYVGIKETESFPRG-WEVNVDLKLFVHNEKLHKYLTV-- 163
Query: 59 DDGAVIRLHSMKRECGIDKLIPLQAFKEPSNGYLVDDSCVFGAEIFVIKPTGKGEALSIV 118
DG V R + K G LIP +P+ GY++ D+ FGAEI ++ P K E ++ +
Sbjct: 164 SDGTVKRYEAAKTYWGFGNLIPRTTLLDPNEGYILHDTLSFGAEISIVNPAEKQEKITFI 223
Query: 119 KVPAQAGNILRWKIPNFSDLRDPEYYSSEFNAGGREW 155
P N+ WKI FS L + YYS EF G R W
Sbjct: 224 SNPPD--NVFTWKILRFSTLENKFYYSDEFLVGDRYW 258
>gi|224069290|ref|XP_002302947.1| predicted protein [Populus trichocarpa]
gi|222844673|gb|EEE82220.1| predicted protein [Populus trichocarpa]
Length = 243
Score = 99.8 bits (247), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 64/155 (41%), Positives = 87/155 (56%), Gaps = 7/155 (4%)
Query: 1 RLILYPNGNKKGQGTGHISLYLALDESTYFPNNPWEVFVNFTFFVQDRIKNEYLAIRYDD 60
+L+LYP+G +G ISL LA+ E P +V V +FF+ D+I++ YL I D
Sbjct: 43 QLVLYPHG--EGGDNDSISLRLAMVERDDMPLGC-DVNVKASFFLYDQIRDRYLVIE-DS 98
Query: 61 GAVIRLHSMKRECGIDKLIPLQAFKEPSNGYLVDDSCVFGAEIFVIKPTGKGEALSIVKV 120
R H+M E G +I KE SNGYLV+D + G E+FV+ T KGE+LS VK
Sbjct: 99 LVERRYHNMMSEWGFTDIISHDDLKEISNGYLVNDCIILGVEVFVLNNTHKGESLSFVKE 158
Query: 121 PAQAGNILRWKIPNFSDLRDPEYYSSEFNAGGREW 155
P + + WKI NFS L + EY S F+ G +W
Sbjct: 159 PENS--LFTWKIDNFS-LYNTEYVSDVFDVKGIKW 190
>gi|297835724|ref|XP_002885744.1| hypothetical protein ARALYDRAFT_899228 [Arabidopsis lyrata subsp.
lyrata]
gi|297835726|ref|XP_002885745.1| hypothetical protein ARALYDRAFT_899229 [Arabidopsis lyrata subsp.
lyrata]
gi|297835728|ref|XP_002885746.1| hypothetical protein ARALYDRAFT_899230 [Arabidopsis lyrata subsp.
lyrata]
gi|297331584|gb|EFH62003.1| hypothetical protein ARALYDRAFT_899228 [Arabidopsis lyrata subsp.
lyrata]
gi|297331585|gb|EFH62004.1| hypothetical protein ARALYDRAFT_899229 [Arabidopsis lyrata subsp.
lyrata]
gi|297331586|gb|EFH62005.1| hypothetical protein ARALYDRAFT_899230 [Arabidopsis lyrata subsp.
lyrata]
Length = 298
Score = 99.8 bits (247), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 63/155 (40%), Positives = 85/155 (54%), Gaps = 5/155 (3%)
Query: 1 RLILYPNGNKKGQGTGHISLYLALDESTYFPNNPWEVFVNFTFFVQDRIKNEYLAIRYDD 60
RL+LY NGN+ G HISLY+ ++E+ P WEV V FV + + +YL + D
Sbjct: 40 RLVLYVNGNQNDGGNNHISLYVRIEETESLPRG-WEVNVELKLFVYNGKQRKYLTV--TD 96
Query: 61 GAVIRLHSMKRECGIDKLIPLQAFKEPSNGYLVDDSCVFGAEIFVIKPTGKGEALSIVKV 120
G V R + K+E G KLIPL F + + GYL D+ FGAEIF+ P E ++ +
Sbjct: 97 GIVKRYNDAKKEWGYGKLIPLPTFLDTNQGYLEQDTASFGAEIFIGTPVQVQEKVTFISN 156
Query: 121 PAQAGNILRWKIPNFSDLRDPEYYSSEFNAGGREW 155
P N+ WKI +FS L D YYS +F R W
Sbjct: 157 PPN--NVFTWKILHFSTLEDKFYYSDDFLVEDRYW 189
>gi|15226599|ref|NP_179173.1| TRAF-like family protein [Arabidopsis thaliana]
gi|4335737|gb|AAD17415.1| unknown protein [Arabidopsis thaliana]
gi|330251338|gb|AEC06432.1| TRAF-like family protein [Arabidopsis thaliana]
Length = 365
Score = 99.4 bits (246), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 53/158 (33%), Positives = 90/158 (56%), Gaps = 9/158 (5%)
Query: 1 RLILYPNGNKKGQGTGHISLYLALDESTYFPNNPWEVFVNFTFFVQDRIKNEYLAIRYDD 60
RL++YP GN+K +G+G IS+Y+ D + +P EVF FFV ++ +N+Y I+ D
Sbjct: 129 RLVIYPKGNEKDKGSGFISMYVEFDNTKVSSTSPMEVFAYIIFFVYNKKENKYFTIQ--D 186
Query: 61 GAVIRLHSMKRECGIDKLIPLQAFKEPSNGYLVD-DSCVFGAEIFVIKPTGKGEALSIVK 119
V R ++++ G+ +++ L+ F + NGY + + C FG ++ V P K E +S
Sbjct: 187 VEVKRFNALRTVWGLSQVLSLETFNDLENGYTFEGEQCEFGVDVMVASPITKWEVVSF-- 244
Query: 120 VPAQAGNILR--WKIPNFSDLRDPEYYSSEFNAGGREW 155
+ +IL+ W + +FS L++ Y S F+ GGR W
Sbjct: 245 --DEKLDILKFSWSVKDFSVLKEEFYVSERFSMGGRLW 280
>gi|42568927|ref|NP_178503.2| TRAF-like family protein [Arabidopsis thaliana]
gi|330250713|gb|AEC05807.1| TRAF-like family protein [Arabidopsis thaliana]
Length = 411
Score = 99.0 bits (245), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 61/155 (39%), Positives = 83/155 (53%), Gaps = 5/155 (3%)
Query: 1 RLILYPNGNKKGQGTGHISLYLALDESTYFPNNPWEVFVNFTFFVQDRIKNEYLAIRYDD 60
RLILY NGN+ G+ HISLYL +E+ + + FV FV + +++YL + D
Sbjct: 153 RLILYVNGNQNDGGSNHISLYLRSEETDHLTYDGSINFV-LKLFVYNGKQDKYLTVT--D 209
Query: 61 GAVIRLHSMKRECGIDKLIPLQAFKEPSNGYLVDDSCVFGAEIFVIKPTGKGEALSIVKV 120
G R + +E G KLIPL F + S GYL D+ FGAEIF+ P E ++ +
Sbjct: 210 GIQKRYNYKNKEWGYGKLIPLSTFLDTSQGYLEQDTASFGAEIFLCPPIQVQEKVTFISN 269
Query: 121 PAQAGNILRWKIPNFSDLRDPEYYSSEFNAGGREW 155
P N+ WKI +FS L D YYS +F R W
Sbjct: 270 PPN--NVFTWKILHFSTLEDIVYYSDDFLVEDRYW 302
>gi|4713949|gb|AAD28295.1| unknown protein [Arabidopsis thaliana]
Length = 412
Score = 99.0 bits (245), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 61/155 (39%), Positives = 83/155 (53%), Gaps = 5/155 (3%)
Query: 1 RLILYPNGNKKGQGTGHISLYLALDESTYFPNNPWEVFVNFTFFVQDRIKNEYLAIRYDD 60
RLILY NGN+ G+ HISLYL +E+ + + FV FV + +++YL + D
Sbjct: 154 RLILYVNGNQNDGGSNHISLYLRSEETDHLTYDGSINFV-LKLFVYNGKQDKYLTVT--D 210
Query: 61 GAVIRLHSMKRECGIDKLIPLQAFKEPSNGYLVDDSCVFGAEIFVIKPTGKGEALSIVKV 120
G R + +E G KLIPL F + S GYL D+ FGAEIF+ P E ++ +
Sbjct: 211 GIQKRYNYKNKEWGYGKLIPLSTFLDTSQGYLEQDTASFGAEIFLCPPIQVQEKVTFISN 270
Query: 121 PAQAGNILRWKIPNFSDLRDPEYYSSEFNAGGREW 155
P N+ WKI +FS L D YYS +F R W
Sbjct: 271 PPN--NVFTWKILHFSTLEDIVYYSDDFLVEDRYW 303
>gi|356505546|ref|XP_003521551.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 12-like [Glycine
max]
Length = 233
Score = 96.3 bits (238), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 51/121 (42%), Positives = 69/121 (57%), Gaps = 4/121 (3%)
Query: 35 WEVFVNFTFFVQDRIKNEYLAIRYDDGAVIRLHSMKRECGIDKLIPLQAFKEPSNGYLVD 94
WEV F + I +EY+A + D V R H +K E G+ K I + F +PSNGYL+D
Sbjct: 10 WEVNAIVNFSAYNFIDDEYVATQ--DTNVRRFHVLKTEWGVAKFIDIDTFNDPSNGYLMD 67
Query: 95 DSCVFGAEIFVIKPTGKGEALSIVKVPAQAGNILRWKIPNFSDLRDPEYYSSEFNAGGRE 154
D+CVFGAE+FV+K T KG+ LS++ P + WK NFS + +Y S F G
Sbjct: 68 DTCVFGAEVFVVKTTTKGDCLSMIHGPIPLSH--SWKFDNFSLAKLDKYESESFVGGNYR 125
Query: 155 W 155
W
Sbjct: 126 W 126
Score = 56.2 bits (134), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 34/106 (32%), Positives = 56/106 (52%), Gaps = 7/106 (6%)
Query: 1 RLILYPNGNKKGQGTGHISLYLALDESTYFPNNPWEVFVNFTFFVQDRIKNEYLAIRYDD 60
+LILYPNG +G+G ISL+L L+ ST PN ++ V T + +I +
Sbjct: 127 KLILYPNGIVEGKGNS-ISLFLTLEVSTLPPNT--KLVVECTLRAKKQISGHHAQT---- 179
Query: 61 GAVIRLHSMKRECGIDKLIPLQAFKEPSNGYLVDDSCVFGAEIFVI 106
G + S G +L+ L +P++G+LV+D+C+ AE ++
Sbjct: 180 GFCRKFSSSNSTWGTRQLVALAKLTDPNSGFLVNDTCILEAEFTIL 225
>gi|42568925|ref|NP_178502.2| TRAF-like family protein [Arabidopsis thaliana]
gi|79321702|ref|NP_001031318.1| TRAF-like family protein [Arabidopsis thaliana]
gi|41059787|gb|AAR99368.1| hypothetical protein At2g04170 [Arabidopsis thaliana]
gi|50058979|gb|AAT69234.1| hypothetical protein At2g04170 [Arabidopsis thaliana]
gi|330250708|gb|AEC05802.1| TRAF-like family protein [Arabidopsis thaliana]
gi|330250709|gb|AEC05803.1| TRAF-like family protein [Arabidopsis thaliana]
Length = 420
Score = 95.1 bits (235), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 62/155 (40%), Positives = 84/155 (54%), Gaps = 5/155 (3%)
Query: 1 RLILYPNGNKKGQGTGHISLYLALDESTYFPNNPWEVFVNFTFFVQDRIKNEYLAIRYDD 60
RL+LY NGN+ G HISLY+ ++E+ P WEV V FV + + +YL ++ D
Sbjct: 162 RLVLYVNGNQNDGGNNHISLYVRIEETESLPKG-WEVNVELKLFVYNGKQRKYLIVK--D 218
Query: 61 GAVIRLHSMKRECGIDKLIPLQAFKEPSNGYLVDDSCVFGAEIFVIKPTGKGEALSIVKV 120
G V R + K+E G KLIPL F + + GYL D FGAEIF E ++ +
Sbjct: 219 GIVKRYNDAKKEWGYGKLIPLTTFLDTNEGYLEQDIASFGAEIFSGTAVQVQEKVTFISN 278
Query: 121 PAQAGNILRWKIPNFSDLRDPEYYSSEFNAGGREW 155
P N+ WKI +FS+L D YYS +F R W
Sbjct: 279 PPN--NVFTWKILHFSNLEDKFYYSDDFLVEDRYW 311
>gi|186499261|ref|NP_001118263.1| TRAF-like family protein [Arabidopsis thaliana]
gi|186499264|ref|NP_001118264.1| TRAF-like family protein [Arabidopsis thaliana]
gi|330250710|gb|AEC05804.1| TRAF-like family protein [Arabidopsis thaliana]
gi|330250711|gb|AEC05805.1| TRAF-like family protein [Arabidopsis thaliana]
Length = 298
Score = 95.1 bits (235), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 62/155 (40%), Positives = 84/155 (54%), Gaps = 5/155 (3%)
Query: 1 RLILYPNGNKKGQGTGHISLYLALDESTYFPNNPWEVFVNFTFFVQDRIKNEYLAIRYDD 60
RL+LY NGN+ G HISLY+ ++E+ P WEV V FV + + +YL ++ D
Sbjct: 40 RLVLYVNGNQNDGGNNHISLYVRIEETESLPKG-WEVNVELKLFVYNGKQRKYLIVK--D 96
Query: 61 GAVIRLHSMKRECGIDKLIPLQAFKEPSNGYLVDDSCVFGAEIFVIKPTGKGEALSIVKV 120
G V R + K+E G KLIPL F + + GYL D FGAEIF E ++ +
Sbjct: 97 GIVKRYNDAKKEWGYGKLIPLTTFLDTNEGYLEQDIASFGAEIFSGTAVQVQEKVTFISN 156
Query: 121 PAQAGNILRWKIPNFSDLRDPEYYSSEFNAGGREW 155
P N+ WKI +FS+L D YYS +F R W
Sbjct: 157 PPN--NVFTWKILHFSNLEDKFYYSDDFLVEDRYW 189
>gi|4713948|gb|AAD28294.1| unknown protein [Arabidopsis thaliana]
Length = 471
Score = 95.1 bits (235), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 62/155 (40%), Positives = 84/155 (54%), Gaps = 5/155 (3%)
Query: 1 RLILYPNGNKKGQGTGHISLYLALDESTYFPNNPWEVFVNFTFFVQDRIKNEYLAIRYDD 60
RL+LY NGN+ G HISLY+ ++E+ P WEV V FV + + +YL ++ D
Sbjct: 213 RLVLYVNGNQNDGGNNHISLYVRIEETESLPKG-WEVNVELKLFVYNGKQRKYLIVK--D 269
Query: 61 GAVIRLHSMKRECGIDKLIPLQAFKEPSNGYLVDDSCVFGAEIFVIKPTGKGEALSIVKV 120
G V R + K+E G KLIPL F + + GYL D FGAEIF E ++ +
Sbjct: 270 GIVKRYNDAKKEWGYGKLIPLTTFLDTNEGYLEQDIASFGAEIFSGTAVQVQEKVTFISN 329
Query: 121 PAQAGNILRWKIPNFSDLRDPEYYSSEFNAGGREW 155
P N+ WKI +FS+L D YYS +F R W
Sbjct: 330 P--PNNVFTWKILHFSNLEDKFYYSDDFLVEDRYW 362
>gi|238479171|ref|NP_001154493.1| TRAF-like family protein [Arabidopsis thaliana]
gi|330250712|gb|AEC05806.1| TRAF-like family protein [Arabidopsis thaliana]
Length = 369
Score = 95.1 bits (235), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 62/155 (40%), Positives = 84/155 (54%), Gaps = 5/155 (3%)
Query: 1 RLILYPNGNKKGQGTGHISLYLALDESTYFPNNPWEVFVNFTFFVQDRIKNEYLAIRYDD 60
RL+LY NGN+ G HISLY+ ++E+ P WEV V FV + + +YL ++ D
Sbjct: 162 RLVLYVNGNQNDGGNNHISLYVRIEETESLPKG-WEVNVELKLFVYNGKQRKYLIVK--D 218
Query: 61 GAVIRLHSMKRECGIDKLIPLQAFKEPSNGYLVDDSCVFGAEIFVIKPTGKGEALSIVKV 120
G V R + K+E G KLIPL F + + GYL D FGAEIF E ++ +
Sbjct: 219 GIVKRYNDAKKEWGYGKLIPLTTFLDTNEGYLEQDIASFGAEIFSGTAVQVQEKVTFISN 278
Query: 121 PAQAGNILRWKIPNFSDLRDPEYYSSEFNAGGREW 155
P N+ WKI +FS+L D YYS +F R W
Sbjct: 279 PPN--NVFTWKILHFSNLEDKFYYSDDFLVEDRYW 311
>gi|297808653|ref|XP_002872210.1| hypothetical protein ARALYDRAFT_910705 [Arabidopsis lyrata subsp.
lyrata]
gi|297318047|gb|EFH48469.1| hypothetical protein ARALYDRAFT_910705 [Arabidopsis lyrata subsp.
lyrata]
Length = 327
Score = 94.7 bits (234), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 55/155 (35%), Positives = 82/155 (52%), Gaps = 5/155 (3%)
Query: 1 RLILYPNGNKKGQGTGHISLYLALDESTYFPNNPWEVFVNFTFFVQDRIKNEYLAIRYDD 60
RL+LY NG + G H+SLY + E+ P WEV V+ FV + N+YL + D
Sbjct: 76 RLVLYTNGKQDDGGKDHVSLYARIVETESLPIG-WEVNVDLKLFVYNGKLNKYLIVT--D 132
Query: 61 GAVIRLHSMKRECGIDKLIPLQAFKEPSNGYLVDDSCVFGAEIFVIKPTGKGEALSIVKV 120
G V R ++ +E G +LIP + + ++G+ D+ FGAEI ++ + E ++ +
Sbjct: 133 GLVKRYNNATKELGFGQLIPQSTYYDGNDGFREQDTGTFGAEISIVNRSNLKEKVTFISN 192
Query: 121 PAQAGNILRWKIPNFSDLRDPEYYSSEFNAGGREW 155
P N+ WKI +FS L D Y S EF G R W
Sbjct: 193 PPN--NVFTWKILHFSTLEDKIYKSDEFLVGDRYW 225
>gi|15231115|ref|NP_188671.1| TRAF-like family protein [Arabidopsis thaliana]
gi|18087637|gb|AAL58948.1|AF462862_1 AT3g20360/MQC12_11 [Arabidopsis thaliana]
gi|332642847|gb|AEE76368.1| TRAF-like family protein [Arabidopsis thaliana]
Length = 363
Score = 94.7 bits (234), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 59/155 (38%), Positives = 82/155 (52%), Gaps = 7/155 (4%)
Query: 2 LILYPNGNKKGQGTGHISLYLALDESTYFPNNPWEVFVNFTFFVQDRIKNEYLAIRYDDG 61
L++YP GNK GTGHISLY+ LD ST + EV V+ F+V ++ + +Y I+ D
Sbjct: 102 LVVYPKGNKNDNGTGHISLYVVLDNST-LTSQSEEVHVDLRFYVFNKKETKYFTIQ--DT 158
Query: 62 AVIRLHSMKRECGIDKLIPLQAFKEPSNGYLVD-DSCVFGAEIFVIKPTGKGEALSIVKV 120
V R ++KR G K++PL F NGYL D D C FG ++ + K E S+ K
Sbjct: 159 DVWRFSAIKRMWGFSKVLPLITFNNLKNGYLYDVDHCEFGVDVIIPPFYEKSEVFSVTK- 217
Query: 121 PAQAGNILRWKIPNFSDLRDPEYYSSEFNAGGREW 155
+ W I +S L +Y S EF GG+ W
Sbjct: 218 -SFPSPRFTWYIQGYSTL-PTDYLSEEFIIGGKSW 250
>gi|9294554|dbj|BAB02817.1| unnamed protein product [Arabidopsis thaliana]
Length = 382
Score = 94.4 bits (233), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 59/155 (38%), Positives = 82/155 (52%), Gaps = 7/155 (4%)
Query: 2 LILYPNGNKKGQGTGHISLYLALDESTYFPNNPWEVFVNFTFFVQDRIKNEYLAIRYDDG 61
L++YP GNK GTGHISLY+ LD ST + EV V+ F+V ++ + +Y I+ D
Sbjct: 121 LVVYPKGNKNDNGTGHISLYVVLDNST-LTSQSEEVHVDLRFYVFNKKETKYFTIQ--DT 177
Query: 62 AVIRLHSMKRECGIDKLIPLQAFKEPSNGYLVD-DSCVFGAEIFVIKPTGKGEALSIVKV 120
V R ++KR G K++PL F NGYL D D C FG ++ + K E S+ K
Sbjct: 178 DVWRFSAIKRMWGFSKVLPLITFNNLKNGYLYDVDHCEFGVDVIIPPFYEKSEVFSVTK- 236
Query: 121 PAQAGNILRWKIPNFSDLRDPEYYSSEFNAGGREW 155
+ W I +S L +Y S EF GG+ W
Sbjct: 237 -SFPSPRFTWYIQGYSTL-PTDYLSEEFIIGGKSW 269
>gi|334186423|ref|NP_192716.2| TRAF-like family protein [Arabidopsis thaliana]
gi|332657397|gb|AEE82797.1| TRAF-like family protein [Arabidopsis thaliana]
Length = 427
Score = 94.0 bits (232), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 56/156 (35%), Positives = 79/156 (50%), Gaps = 8/156 (5%)
Query: 1 RLILYPNGNKKGQGTGHISLYLALDESTYFPNNPWEVFVNFTFFVQDRIKNEYLAIRYDD 60
RLI YP G + G HIS+Y ++ + ++ V FF+ + +Y + D
Sbjct: 95 RLIFYPAGKVEEGGKDHISIYARVEN---VGASEMQIDVELKFFLYNHNAKKYSV--FQD 149
Query: 61 GAVIRLHSMKRECGIDKLIPLQAFKEPSNGYLVDDSCVFGAEIFVIKPTGKGEALSIVKV 120
G V K+ECG +++ F +P NGY D+C+ G EIFVIKP K E + +
Sbjct: 150 GTVKHYSKEKKECGFAQMLLRSKFNDPKNGYTDGDACIVGVEIFVIKPIEKVERVVFTQN 209
Query: 121 PAQAGNILRWKIPNFSDLRDPEY-YSSEFNAGGREW 155
P N WKI +FS L D +Y YS EF G R+W
Sbjct: 210 PPT--NKFTWKISDFSKLGDKKYHYSDEFVVGERKW 243
>gi|4538908|emb|CAB39645.1| putative protein [Arabidopsis thaliana]
gi|7267673|emb|CAB78101.1| putative protein [Arabidopsis thaliana]
Length = 443
Score = 94.0 bits (232), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 56/156 (35%), Positives = 79/156 (50%), Gaps = 8/156 (5%)
Query: 1 RLILYPNGNKKGQGTGHISLYLALDESTYFPNNPWEVFVNFTFFVQDRIKNEYLAIRYDD 60
RLI YP G + G HIS+Y ++ + ++ V FF+ + +Y + D
Sbjct: 111 RLIFYPAGKVEEGGKDHISIYARVEN---VGASEMQIDVELKFFLYNHNAKKYSV--FQD 165
Query: 61 GAVIRLHSMKRECGIDKLIPLQAFKEPSNGYLVDDSCVFGAEIFVIKPTGKGEALSIVKV 120
G V K+ECG +++ F +P NGY D+C+ G EIFVIKP K E + +
Sbjct: 166 GTVKHYSKEKKECGFAQMLLRSKFNDPKNGYTDGDACIVGVEIFVIKPIEKVERVVFTQN 225
Query: 121 PAQAGNILRWKIPNFSDLRDPEY-YSSEFNAGGREW 155
P N WKI +FS L D +Y YS EF G R+W
Sbjct: 226 PPT--NKFTWKISDFSKLGDKKYHYSDEFVVGERKW 259
>gi|297813409|ref|XP_002874588.1| hypothetical protein ARALYDRAFT_489831 [Arabidopsis lyrata subsp.
lyrata]
gi|297320425|gb|EFH50847.1| hypothetical protein ARALYDRAFT_489831 [Arabidopsis lyrata subsp.
lyrata]
Length = 284
Score = 93.6 bits (231), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 53/156 (33%), Positives = 83/156 (53%), Gaps = 8/156 (5%)
Query: 1 RLILYPNGNKKGQGTGHISLYLALDESTYFPNNPWEVFVNFTFFVQDRIKNEYLAIRYDD 60
RLI YP G + G H+S+Y +D + ++ V FF+ + +Y + D
Sbjct: 28 RLIFYPAGKVEEGGKDHVSIYARIDN---VGASEMQIDVELKFFIYNHNIKKYSV--FQD 82
Query: 61 GAVIRLHSMKRECGIDKLIPLQAFKEPSNGYLVDDSCVFGAEIFVIKPTGKGEALSIVKV 120
G + K+E G+ +++ L F +P NGY+ ++C+ G EIFVIKP K E ++ +
Sbjct: 83 GTMKHYSKEKKEWGLAQMLLLSKFNDPKNGYIDGNACIVGVEIFVIKPREKVERVAFTQN 142
Query: 121 PAQAGNILRWKIPNFSDLRDPE-YYSSEFNAGGREW 155
P + N WKI +FS++ D YYS EF G R+W
Sbjct: 143 PPE--NKFTWKISHFSEIGDKRYYYSDEFVVGDRKW 176
>gi|297841693|ref|XP_002888728.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297334569|gb|EFH64987.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
Length = 292
Score = 93.2 bits (230), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 54/157 (34%), Positives = 82/157 (52%), Gaps = 12/157 (7%)
Query: 1 RLILYPNGNKKGQGTGHISLYLALDESTYFPNNPWEVFVNFTFFVQDRIKNEYLAIRYDD 60
RLI+YP GN K +G IS+Y+ LD ++ + P EVF FFV ++ K L R+
Sbjct: 59 RLIIYPKGNVKDNESGFISMYVELDSTSLTESTPTEVFAELRFFVYNKKKTSTLLKRFS- 117
Query: 61 GAVIRLHSMKRECGIDKLIPLQAFKEPSNGYLVD-DSCVFGAEIFVIKPTGKGEALSIVK 119
++K G+ K++P F NGY+ + C FG ++ V P E LS +
Sbjct: 118 -------ALKMAWGLRKILPCDTFINRENGYIFEGGECEFGVDVIVSSPLTNWEILSFDE 170
Query: 120 VPAQAGNILRWKIPNFSDLRDPEYYSSE-FNAGGREW 155
+ W + NFS L++ E+Y+S+ F+ GGREW
Sbjct: 171 KLSYPK--FSWSVENFSQLKEKEFYTSKRFSIGGREW 205
>gi|26452672|dbj|BAC43419.1| unknown protein [Arabidopsis thaliana]
Length = 297
Score = 93.2 bits (230), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 52/156 (33%), Positives = 80/156 (51%), Gaps = 9/156 (5%)
Query: 1 RLILYPNGNKKGQGTGHISLYLALDESTYFPNNPWEVFVNFTFFVQDRIKNEYLAIRYDD 60
RLI YP G + G H+S+Y ++ ++ FF+ +R +Y + D
Sbjct: 42 RLIFYPAGKLEEGGKDHVSIYARIEN----VGASMQIDAELKFFIYNRNNKQYSV--FQD 95
Query: 61 GAVIRLHSMKRECGIDKLIPLQAFKEPSNGYLVDDSCVFGAEIFVIKPTGKGEALSIVKV 120
G + + K+ECG +++ F +P NGY+ ++C+ G EIFVIKP K E + +
Sbjct: 96 GTMKHYNKEKKECGFAQMLLFSKFNDPKNGYIDGNACIVGVEIFVIKPIEKVERVVFTQN 155
Query: 121 PAQAGNILRWKIPNFSDLRDPE-YYSSEFNAGGREW 155
P + N WKI +FS + D YYS EF G R+W
Sbjct: 156 PPE--NKFTWKISHFSYIGDKRYYYSDEFVVGDRKW 189
>gi|296083027|emb|CBI22431.3| unnamed protein product [Vitis vinifera]
Length = 169
Score = 91.7 bits (226), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 45/102 (44%), Positives = 61/102 (59%), Gaps = 2/102 (1%)
Query: 49 IKNEYLAIRYDDGAVIRLHSMKRECGIDKLIPLQAFKEPSNGYLVDDSCVFGAEIFVIKP 108
+ +YL ++ DG V + MK CG + + L K+P NGYL+DDSC+FGAE+FVIK
Sbjct: 1 MDEKYLTVQDADGKVRHFNVMKTPCGFARFLSLDVLKDPRNGYLMDDSCIFGAEVFVIKY 60
Query: 109 TGKGEALSIVKVPAQAGNILRWKIPNFSDLRDPEYYSSEFNA 150
+GKGE S++K P G W I NFS L + +S FN
Sbjct: 61 SGKGECPSMLKDP--VGGTFTWVIKNFSTLNEEVLHSEIFNV 100
>gi|30681191|ref|NP_192715.2| TRAF-like family protein [Arabidopsis thaliana]
gi|334186421|ref|NP_001190695.1| TRAF-like family protein [Arabidopsis thaliana]
gi|332657394|gb|AEE82794.1| TRAF-like family protein [Arabidopsis thaliana]
gi|332657395|gb|AEE82795.1| TRAF-like family protein [Arabidopsis thaliana]
Length = 297
Score = 91.3 bits (225), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 51/156 (32%), Positives = 79/156 (50%), Gaps = 9/156 (5%)
Query: 1 RLILYPNGNKKGQGTGHISLYLALDESTYFPNNPWEVFVNFTFFVQDRIKNEYLAIRYDD 60
RLI YP G + G H+S+Y ++ ++ FF+ + +Y + D
Sbjct: 42 RLIFYPAGKLEEGGKDHVSIYARIEN----VGASMQIDAELKFFIYNHNNKQYSV--FQD 95
Query: 61 GAVIRLHSMKRECGIDKLIPLQAFKEPSNGYLVDDSCVFGAEIFVIKPTGKGEALSIVKV 120
G + + K+ECG +++ F +P NGY+ ++C+ G EIFVIKP K E + +
Sbjct: 96 GTMKHYNKEKKECGFAQMLLFSKFNDPKNGYIDGNACIVGVEIFVIKPIEKVERVVFTQN 155
Query: 121 PAQAGNILRWKIPNFSDLRDPE-YYSSEFNAGGREW 155
P + N WKI +FS + D YYS EF G R+W
Sbjct: 156 PPE--NKFTWKISHFSYIGDKRYYYSDEFVVGDRKW 189
>gi|4538907|emb|CAB39644.1| putative protein [Arabidopsis thaliana]
gi|7267672|emb|CAB78100.1| putative protein [Arabidopsis thaliana]
Length = 336
Score = 91.3 bits (225), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 51/156 (32%), Positives = 79/156 (50%), Gaps = 9/156 (5%)
Query: 1 RLILYPNGNKKGQGTGHISLYLALDESTYFPNNPWEVFVNFTFFVQDRIKNEYLAIRYDD 60
RLI YP G + G H+S+Y ++ ++ FF+ + +Y + D
Sbjct: 58 RLIFYPAGKLEEGGKDHVSIYARIEN----VGASMQIDAELKFFIYNHNNKQYSV--FQD 111
Query: 61 GAVIRLHSMKRECGIDKLIPLQAFKEPSNGYLVDDSCVFGAEIFVIKPTGKGEALSIVKV 120
G + + K+ECG +++ F +P NGY+ ++C+ G EIFVIKP K E + +
Sbjct: 112 GTMKHYNKEKKECGFAQMLLFSKFNDPKNGYIDGNACIVGVEIFVIKPIEKVERVVFTQN 171
Query: 121 PAQAGNILRWKIPNFSDLRDPE-YYSSEFNAGGREW 155
P + N WKI +FS + D YYS EF G R+W
Sbjct: 172 PPE--NKFTWKISHFSYIGDKRYYYSDEFVVGDRKW 205
>gi|334185526|ref|NP_188846.2| TRAF-like family protein [Arabidopsis thaliana]
gi|332643066|gb|AEE76587.1| TRAF-like family protein [Arabidopsis thaliana]
Length = 648
Score = 90.5 bits (223), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 47/156 (30%), Positives = 87/156 (55%), Gaps = 5/156 (3%)
Query: 1 RLILYPNGNKKGQGTGHISLYLALDESTYFPNNPWEVFVNFTFFVQDRIKNEYLAIRYDD 60
R+I+YP GN+K G+G IS+Y+ +D ++ EVF + FFV ++ +N+Y I++ +
Sbjct: 390 RMIIYPKGNRKDDGSGFISMYVEIDSTSLLTTPTTEVFADLRFFVFNKKENKYYTIQHVE 449
Query: 61 GAVIRLHSMKRECGIDKLIPLQAFKEPSNGYLVD-DSCVFGAEIFVIKPTGKGEALSIVK 119
+ ++ + G+ +++P+ F +P NGY+ + D C FG ++ V P E ++ +
Sbjct: 450 SKL--FNAFRTIWGLAQVLPVDTFTDPKNGYIFEGDQCEFGVDVIVAAPPTNWEIHTLHE 507
Query: 120 VPAQAGNILRWKIPNFSDLRDPEYYSSEFNAGGREW 155
+Q W + NFS+L + Y S F+ R+W
Sbjct: 508 ALSQPK--FFWTVKNFSELNNNVYTSGNFSMRERKW 541
Score = 64.3 bits (155), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 47/175 (26%), Positives = 79/175 (45%), Gaps = 26/175 (14%)
Query: 1 RLILYPNGNKKGQGTGHISLYLALDESTYFPNNPWEVFVNFTFFVQDRIKNEYLAIR--- 57
RL++YP GN K +G+G IS+Y+ +D + + VF FFV ++ ++Y I+
Sbjct: 49 RLVIYPKGNAKDEGSGFISMYVEIDSTNLLSSPLTGVFAYLVFFVYNKKTDKYFTIKGLY 108
Query: 58 -------YDDGAVI----RLHSM-----KRECGIDKL-IPLQAFKEPSNGYLVDDSCVFG 100
Y D ++ +HS+ R+ D + L+ F N + D C FG
Sbjct: 109 ISNIFHIYIDLLLVCFPFSIHSLLVFFTHRQFMHDVIDSELKRF----NAFRTGDQCEFG 164
Query: 101 AEIFVIKPTGKGEALSIVKVPAQAGNILRWKIPNFSDLRDPEYYSSEFNAGGREW 155
++ V K E +S + W + F +L++ Y S +F GGR+W
Sbjct: 165 VDVLVAPSLTKWEVVSFNQKILDPK--FSWSLKKFKELKEELYNSDKFLVGGRQW 217
>gi|18402593|ref|NP_566660.1| TRAF-like family protein [Arabidopsis thaliana]
gi|9294556|dbj|BAB02819.1| unnamed protein product [Arabidopsis thaliana]
gi|18650635|gb|AAL75887.1| AT3g20370/MQC12_13 [Arabidopsis thaliana]
gi|20453333|gb|AAM19905.1| AT3g20370/MQC12_13 [Arabidopsis thaliana]
gi|21593595|gb|AAM65562.1| unknown [Arabidopsis thaliana]
gi|332642849|gb|AEE76370.1| TRAF-like family protein [Arabidopsis thaliana]
Length = 379
Score = 90.5 bits (223), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 53/159 (33%), Positives = 84/159 (52%), Gaps = 16/159 (10%)
Query: 2 LILYPNGNKKGQGTGHISLYLALDESTYFPNNPWEVFVNFTFFVQDRIKNEYLAIRYDDG 61
L+++PNGNKK G+G++SLY+A+D ST E++ + F++ ++ + +Y I+ D
Sbjct: 121 LVVFPNGNKKDSGSGYLSLYVAIDNSTL---GQQEIYADLRFYIFNKNERKYFTIQ--DT 175
Query: 62 AVIRLHSMKRECGIDKLIPLQAFKEPSNGYLVD-DSCVFGAEIFVIKPTGKGEALSIVKV 120
V + K G +++P+ FK+P+ GYL D D C FG ++ + K E S+ +
Sbjct: 176 DVWKFSVFKTMWGFSQVLPIDTFKDPTKGYLYDGDHCEFGVDVTMPSLYEKSELFSVTE- 234
Query: 121 PAQAGNILR----WKIPNFSDLRDPEYYSSEFNAGGREW 155
N L W I FS L Y S F+ GGR W
Sbjct: 235 -----NFLNPRFTWTIRGFSTLLKNSYLSEVFSIGGRSW 268
>gi|388515477|gb|AFK45800.1| unknown [Lotus japonicus]
Length = 154
Score = 90.5 bits (223), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 44/84 (52%), Positives = 57/84 (67%), Gaps = 1/84 (1%)
Query: 1 RLILYPNGNKKGQGTGHISLYLALDESTYFPNNPWEVFVNFTFFVQDRIKNEYLAIRYDD 60
RLILYP+GN K G+GH+SLYLA+ ++ P WEV VNF FV D+ N YL I+ D
Sbjct: 64 RLILYPSGNHKSNGSGHVSLYLAIADTDDLPEG-WEVNVNFKLFVFDQKNNNYLTIQAAD 122
Query: 61 GAVIRLHSMKRECGIDKLIPLQAF 84
GAV + H MK+E G D++I L+A
Sbjct: 123 GAVRKFHEMKKEWGFDQMIELEAL 146
>gi|297851090|ref|XP_002893426.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297339268|gb|EFH69685.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
Length = 384
Score = 89.0 bits (219), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 51/155 (32%), Positives = 82/155 (52%), Gaps = 6/155 (3%)
Query: 2 LILYPNGNKKGQGTGHISLYLALDESTYFPNNPWEVFVNFTFFVQDRIKNEYLAIRYDDG 61
L++YPNGNKK G+G++SLY+A+D ST + EV+ + F++ ++ + +Y I+ D
Sbjct: 123 LVVYPNGNKKDSGSGYLSLYVAIDNSTLVAAHQ-EVYADLRFYIFNKNERKYFTIQ--DT 179
Query: 62 AVIRLHSMKRECGIDKLIPLQAFKEPSNGYLVD-DSCVFGAEIFVIKPTGKGEALSIVKV 120
V + + K G +++ + FK+P NGYL D D C FG ++ + E ++ +
Sbjct: 180 DVWKFNVFKTMWGFSQVLSIDTFKDPKNGYLYDGDHCEFGVDVTIPSLYKISELFTVTEN 239
Query: 121 PAQAGNILRWKIPNFSDLRDPEYYSSEFNAGGREW 155
W I FS L Y S F+ GGR W
Sbjct: 240 FHNPR--FTWSIRGFSMLLKDSYLSDVFSIGGRNW 272
>gi|297838183|ref|XP_002886973.1| hypothetical protein ARALYDRAFT_894188 [Arabidopsis lyrata subsp.
lyrata]
gi|297332814|gb|EFH63232.1| hypothetical protein ARALYDRAFT_894188 [Arabidopsis lyrata subsp.
lyrata]
Length = 317
Score = 88.6 bits (218), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 52/165 (31%), Positives = 85/165 (51%), Gaps = 14/165 (8%)
Query: 1 RLILYPNGNKKGQGTGHISLYLALDESTYFPNNPWEV---------FVNFTFFVQDRIKN 51
RL++YP GN+K G G IS+Y+ +++ P EV F FFV ++ N
Sbjct: 50 RLVIYPKGNEKDNGNGFISMYVEFGDTSLMSTPPSEVFAYNVGPPLFAYLVFFVYNKKAN 109
Query: 52 EYLAIRYDDGAVIRLHSMKRECGIDKLIPLQAFKEPSNGYLVD-DSCVFGAEIFVIKPTG 110
+Y I+ D V R ++++ G+ +++ L F +P NG++ + + C FG ++ V P
Sbjct: 110 KYFTIQ--DVEVKRFNALRTVWGLPQVLSLGTFNDPKNGFIFEGEHCEFGVDVMVSPPFN 167
Query: 111 KGEALSIVKVPAQAGNILRWKIPNFSDLRDPEYYSSEFNAGGREW 155
K E +S + W + NFS LR+ Y S+ F GGR+W
Sbjct: 168 KWEVVSFDEKLYNPK--FSWNVKNFSMLRENLYISNSFPMGGRKW 210
>gi|297830718|ref|XP_002883241.1| hypothetical protein ARALYDRAFT_479561 [Arabidopsis lyrata subsp.
lyrata]
gi|297329081|gb|EFH59500.1| hypothetical protein ARALYDRAFT_479561 [Arabidopsis lyrata subsp.
lyrata]
Length = 385
Score = 87.8 bits (216), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 50/155 (32%), Positives = 80/155 (51%), Gaps = 6/155 (3%)
Query: 2 LILYPNGNKKGQGTGHISLYLALDESTYFPNNPWEVFVNFTFFVQDRIKNEYLAIRYDDG 61
L+++PNGNKK G+G++SLY+A+D ST E++ + F++ ++ + +Y I+ D
Sbjct: 124 LVVFPNGNKKDGGSGYLSLYVAIDNSTLVAAQQ-EIYADLRFYIFNKNERKYFTIQ--DT 180
Query: 62 AVIRLHSMKRECGIDKLIPLQAFKEPSNGYLVD-DSCVFGAEIFVIKPTGKGEALSIVKV 120
V + K G +++ + FK+P NGYL D D C FG ++ + K E ++ +
Sbjct: 181 DVWKFSVFKTMWGFSQVLSIDTFKDPINGYLYDGDHCEFGVDVTIPSLYEKSELFTVTEN 240
Query: 121 PAQAGNILRWKIPNFSDLRDPEYYSSEFNAGGREW 155
W I FS L Y S F GGR W
Sbjct: 241 FQNPR--FTWTIRGFSTLLKDTYLSDVFTIGGRSW 273
>gi|9279767|dbj|BAB01393.1| unnamed protein product [Arabidopsis thaliana]
Length = 312
Score = 87.4 bits (215), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 47/156 (30%), Positives = 84/156 (53%), Gaps = 7/156 (4%)
Query: 1 RLILYPNGNKKGQGTGHISLYLALDESTYFPNNPWEVFVNFTFFVQDRIKNEYLAIRYDD 60
R+I+YP GN+K G+G IS+Y+ +D ++ EVF + FFV ++ +N+Y I+
Sbjct: 56 RMIIYPKGNRKDDGSGFISMYVEIDSTSLLTTPTTEVFADLRFFVFNKKENKYYTIQQSK 115
Query: 61 GAVIRLHSMKRECGIDKLIPLQAFKEPSNGYLVD-DSCVFGAEIFVIKPTGKGEALSIVK 119
++ + G+ +++P+ F +P NGY+ + D C FG ++ V P E ++ +
Sbjct: 116 ----LFNAFRTIWGLAQVLPVDTFTDPKNGYIFEGDQCEFGVDVIVAAPPTNWEIHTLHE 171
Query: 120 VPAQAGNILRWKIPNFSDLRDPEYYSSEFNAGGREW 155
+Q W + NFS+L + Y S F+ R+W
Sbjct: 172 ALSQPK--FFWTVKNFSELNNNVYTSGNFSMRERKW 205
>gi|145334555|ref|NP_001078623.1| TRAF-like family protein [Arabidopsis thaliana]
gi|332006164|gb|AED93547.1| TRAF-like family protein [Arabidopsis thaliana]
Length = 327
Score = 86.7 bits (213), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 50/135 (37%), Positives = 72/135 (53%), Gaps = 5/135 (3%)
Query: 21 YLALDESTYFPNNPWEVFVNFTFFVQDRIKNEYLAIRYDDGAVIRLHSMKRECGIDKLIP 80
Y ++E+ P WEV V+ FV + ++YL + DG V R ++ K+E G +LIP
Sbjct: 89 YKWIEETNSLPLG-WEVNVDLKLFVHNGKLHKYLTV--TDGLVKRYNNAKKEWGFGQLIP 145
Query: 81 LQAFKEPSNGYLVDDSCVFGAEIFVIKPTGKGEALSIVKVPAQAGNILRWKIPNFSDLRD 140
F + GYL D+ FGAEIF++KP + E ++ + P N+ WKI FS L D
Sbjct: 146 RSTFYNANEGYLDQDTGSFGAEIFIVKPAQQQEKVTFISNPPN--NVFTWKILRFSTLED 203
Query: 141 PEYYSSEFNAGGREW 155
YYS +F R W
Sbjct: 204 KFYYSDDFLVEDRYW 218
>gi|224079676|ref|XP_002305907.1| predicted protein [Populus trichocarpa]
gi|222848871|gb|EEE86418.1| predicted protein [Populus trichocarpa]
Length = 175
Score = 86.7 bits (213), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 54/154 (35%), Positives = 77/154 (50%), Gaps = 36/154 (23%)
Query: 2 LILYPNGNKKGQGTGHISLYLALDESTYFPNNPWEVFVNFTFFVQDRIKNEYLAIRYDDG 61
+IL PNG KK G HISL+LA+ +P +V +++
Sbjct: 1 MILNPNGKKKEDGNSHISLFLAM-------TDPDDVSLDW-------------------- 33
Query: 62 AVIRLHSMKRECGIDKLIPLQAFKEPSNGYLVDDSCVFGAEIFVIKPTGKGEALSIVKVP 121
MK E G +L+ ++ SNG+LVDD +FG E+F ++P G+GE+LS VK P
Sbjct: 34 ------EMKMEWGFIELLSHDTLRDASNGFLVDDRSIFGVEVFGVRP-GEGESLSFVKEP 86
Query: 122 AQAGNILRWKIPNFSDLRDPEYYSSEFNAGGREW 155
A + WKI NFS L ++S F GR+W
Sbjct: 87 ANG--LYTWKISNFSALNKYNHFSEGFTVEGRKW 118
>gi|3319348|gb|AAC26237.1| F9D12.6 gene product [Arabidopsis thaliana]
Length = 319
Score = 85.9 bits (211), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 46/121 (38%), Positives = 68/121 (56%), Gaps = 4/121 (3%)
Query: 35 WEVFVNFTFFVQDRIKNEYLAIRYDDGAVIRLHSMKRECGIDKLIPLQAFKEPSNGYLVD 94
WEV V+ FV + N+YL + DG V R ++ +E G +LIP F + ++GY
Sbjct: 101 WEVNVDLKLFVYNGKLNKYLIVT--DGTVKRYNNATKELGYGQLIPQSTFYDGNDGYREQ 158
Query: 95 DSCVFGAEIFVIKPTGKGEALSIVKVPAQAGNILRWKIPNFSDLRDPEYYSSEFNAGGRE 154
D+ FGAEI+++KP + E ++ + P N+ WKI +FS L D Y S+EF G R
Sbjct: 159 DTGTFGAEIYIVKPAQQKEKVTFISNPPD--NVFTWKILHFSTLEDKVYQSNEFLVGDRY 216
Query: 155 W 155
W
Sbjct: 217 W 217
>gi|15232931|ref|NP_189462.1| TRAF-like family protein [Arabidopsis thaliana]
gi|13937242|gb|AAK50113.1|AF372976_1 AT3g28220/T19D11_3 [Arabidopsis thaliana]
gi|11994584|dbj|BAB02639.1| unnamed protein product [Arabidopsis thaliana]
gi|22137146|gb|AAM91418.1| AT3g28220/T19D11_3 [Arabidopsis thaliana]
gi|332643897|gb|AEE77418.1| TRAF-like family protein [Arabidopsis thaliana]
Length = 370
Score = 85.9 bits (211), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 53/156 (33%), Positives = 81/156 (51%), Gaps = 7/156 (4%)
Query: 2 LILYPNGN-KKGQGTGHISLYLALDESTYFPNNPWEVFVNFTFFVQDRIKNEYLAIRYDD 60
LI+YP GN K+G ++S+Y+ +D ST N+P EV+ FF+ +R +++YL + D
Sbjct: 116 LIVYPKGNIKEGAPLNYVSMYVQIDNSTLL-NSPKEVYAEVKFFIYNRKEDKYLTYQETD 174
Query: 61 GAVIRLHSMKRECGIDKLIPLQAFKEPSNGYLVD-DSCVFGAEIFVIKPTGKGEALSIVK 119
R K G + P P+ G+L D D+ +FG ++FV + K E S K
Sbjct: 175 AK--RFFLFKPYWGYGNVRPYTDVANPNAGWLFDGDNVLFGVDVFVTEVFNKWEVFSFTK 232
Query: 120 VPAQAGNILRWKIPNFSDLRDPEYYSSEFNAGGREW 155
+ + +W +PNFS L Y S +F GGR W
Sbjct: 233 --SLHDRLYKWTLPNFSSLEKQYYVSDKFVIGGRSW 266
>gi|224100507|ref|XP_002311903.1| predicted protein [Populus trichocarpa]
gi|222851723|gb|EEE89270.1| predicted protein [Populus trichocarpa]
Length = 249
Score = 84.3 bits (207), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 50/135 (37%), Positives = 70/135 (51%), Gaps = 16/135 (11%)
Query: 35 WEVFVNFTFFVQDRIKNEYLAI-----------RYDD-GAVIRLHSMKRECGIDKLIPLQ 82
WEV V F F+ D+ K+ YL + R D G R H +K ECG D+ I L
Sbjct: 11 WEVNVIFRLFLLDQNKDSYLKVMPLSDVLALLPRLDAAGKERRFHGLKLECGFDQFIKLS 70
Query: 83 AFKEPSNGYLVDDSCVFGAEIFVI--KPTGKGEALSIVKVPAQAGNILRWKIPNFSDLRD 140
F + G++++D+CV GAE+FV + GKGE LS+ K P + WKI +FS L +
Sbjct: 71 TFNDARYGFVLEDTCVLGAEVFVCGERSRGKGEVLSMKKDPTASKYT--WKIVDFSKLDE 128
Query: 141 PEYYSSEFNAGGREW 155
S F+ G +W
Sbjct: 129 KRQESQIFSTGDHQW 143
Score = 37.0 bits (84), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 33/107 (30%), Positives = 52/107 (48%), Gaps = 8/107 (7%)
Query: 1 RLILYPNGNKKGQGTGHISLYLALDESTYFPNNPWEVFVNFTFFVQDRIKNEYLAIRYDD 60
+++LYP G G GT H+SLYLALD +T P V+ +T + D++ + +
Sbjct: 144 KIVLYPKGKGPGMGT-HLSLYLALDLAT-LPAGC-RVYAEYTLRLVDQLYDRKFDMY--G 198
Query: 61 GAVIRLHSMKRECGIDKLIPLQAFKEPSNGYL-VDDSCVFGAEIFVI 106
A + E G + L ++ SN YL D C+ AE+ V+
Sbjct: 199 KAKSWFGASSSENGWSRYGLLSLYQ--SNNYLFAKDICMIEAEVIVL 243
>gi|224101481|ref|XP_002312298.1| predicted protein [Populus trichocarpa]
gi|222852118|gb|EEE89665.1| predicted protein [Populus trichocarpa]
Length = 292
Score = 84.0 bits (206), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 54/157 (34%), Positives = 77/157 (49%), Gaps = 30/157 (19%)
Query: 1 RLILYPNGNKKGQGTGHISLYLALDESTYFPNNPWEVFVNFTFFVQDRIKNEYLAIRYDD 60
+L+LYP+GNK +ISLYLA +++ P WEV V F F+ D+ K+ YL
Sbjct: 57 KLVLYPSGNKSRNVKDYISLYLAKVDASSLPLG-WEVHVIFRLFLLDQNKDSYL------ 109
Query: 61 GAVIRLHSMKRECGIDKLIPLQAFKEPSNGYLVDDSCVFGAEIFVI--KPTGKGEALSIV 118
L F + G+L++D+CV GAE+FV + GKGE LS++
Sbjct: 110 --------------------LSTFNDSRYGFLLEDTCVLGAEVFVRRERSRGKGEVLSMI 149
Query: 119 KVPAQAGNILRWKIPNFSDLRDPEYYSSEFNAGGREW 155
K P A WKI NF L + S F++ +W
Sbjct: 150 KQPTAAFK-HTWKIENFLKLDEKRQESQTFSSASEKW 185
Score = 51.2 bits (121), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 31/106 (29%), Positives = 57/106 (53%), Gaps = 5/106 (4%)
Query: 1 RLILYPNGNKKGQGTGHISLYLALDESTYFPNNPWEVFVNFTFFVQDRIKNEYLAIRYDD 60
+++LYP G G GT H+SLYLA+D T P ++ ++T + +++K+ L +
Sbjct: 186 KILLYPKGKDFGMGT-HLSLYLAVDLET-LPAGC-RLYADYTLRIVNQVKDRKLDL--SA 240
Query: 61 GAVIRLHSMKRECGIDKLIPLQAFKEPSNGYLVDDSCVFGAEIFVI 106
A + + E G + + L +P+N Y++ D C+ AE+ V+
Sbjct: 241 KAKHWFGASRSESGWTRYVSLDYIYQPNNAYVIKDICIIEAEVNVL 286
>gi|224136334|ref|XP_002326835.1| predicted protein [Populus trichocarpa]
gi|222835150|gb|EEE73585.1| predicted protein [Populus trichocarpa]
Length = 190
Score = 83.6 bits (205), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 45/96 (46%), Positives = 53/96 (55%), Gaps = 14/96 (14%)
Query: 60 DGAVIRLHSMKRECGIDKLIPLQAFKEPSNGYLVDDSCVFGAEIFVIKPTGKGEALSIVK 119
DG+V R H MK E G D+L+ L+ F + S GY V D CVFGAEIFVIKPT K E S++K
Sbjct: 10 DGSVKRFHEMKTEWGFDQLLSLETFNDASKGYPVKDCCVFGAEIFVIKPTRKWELHSMIK 69
Query: 120 VPAQAGNILRWKIPNFSDLRDPEYYSSEFNAGGREW 155
+FS L Y S F AG R W
Sbjct: 70 --------------DFSKLDKSSYLSKAFTAGRRSW 91
>gi|297821919|ref|XP_002878842.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297324681|gb|EFH55101.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
Length = 294
Score = 82.8 bits (203), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 49/141 (34%), Positives = 76/141 (53%), Gaps = 7/141 (4%)
Query: 1 RLILYPNGNKKGQGTGHISLYLALDESTYFPNNPWEVFVNFTFFVQDRIKNEYLAIRYDD 60
R+I+YPNGN K G+G IS+Y+ +D + P EVF + FFV ++ +N+Y I+ D
Sbjct: 52 RMIIYPNGNNKDNGSGFISMYVEIDGESLMSTPPSEVFADVRFFVFNKNENKYFTIQ--D 109
Query: 61 GAVIRLHSMKRECGIDKLIPLQAFKEPSNGYLV-DDSCVFGAEIFVIKPTGKGEALSIVK 119
+S++ G+ +++ F +P NGY+ D C FG ++ V P K E +S
Sbjct: 110 VESKPFNSLRPVWGLPQVLQFVTFNDPKNGYIFGGDQCEFGVDVIVAPPPTKWETISF-- 167
Query: 120 VPAQAGN-ILRWKIPNFSDLR 139
A+ N W I NFS+L
Sbjct: 168 -DAKLINPKFSWTIKNFSELE 187
>gi|297834974|ref|XP_002885369.1| hypothetical protein ARALYDRAFT_479560 [Arabidopsis lyrata subsp.
lyrata]
gi|297331209|gb|EFH61628.1| hypothetical protein ARALYDRAFT_479560 [Arabidopsis lyrata subsp.
lyrata]
Length = 339
Score = 82.4 bits (202), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 60/157 (38%), Positives = 81/157 (51%), Gaps = 10/157 (6%)
Query: 2 LILYPNGNKKGQGTGHISLYLALDESTYFPNNPWEVFVNFTFFVQDRIKNEYLAIRYDDG 61
L++YP GNK GTG+ISLY+ LD ST + EV V+ F+V ++ + +Y I+ D
Sbjct: 91 LVVYPKGNKNDNGTGYISLYVVLDISTLTSPHE-EVHVDLRFYVFNKKEKKYFTIQ--DT 147
Query: 62 AVIRLHSMKRECGIDKLIPLQAFKEPSNGYLVD-DSCVFGAEIFVIKPT--GKGEALSIV 118
V R ++K G K++PL F NGYL D D C FG + VI P K E S+
Sbjct: 148 DVWRFSAIKTMWGFSKVLPLTTFNNLKNGYLYDIDHCEFGG-VDVIIPAFYEKSELFSVT 206
Query: 119 KVPAQAGNILRWKIPNFSDLRDPEYYSSEFNAGGREW 155
K + W I FS L +Y S EF G + W
Sbjct: 207 K--SFPNERFTWFIQGFSTL-PTDYLSEEFIIGRKSW 240
>gi|297825077|ref|XP_002880421.1| hypothetical protein ARALYDRAFT_320057 [Arabidopsis lyrata subsp.
lyrata]
gi|297326260|gb|EFH56680.1| hypothetical protein ARALYDRAFT_320057 [Arabidopsis lyrata subsp.
lyrata]
Length = 388
Score = 80.9 bits (198), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 46/129 (35%), Positives = 68/129 (52%), Gaps = 7/129 (5%)
Query: 2 LILYPNGNKKGQGTGHISLYLALDESTYFPNNPWEVFVNFTFFVQDRIKNEYLAIRYDDG 61
++YPNGNKK G++SLY +D ST ++P +V+ FFV +R+ ++Y Y +
Sbjct: 138 FLIYPNGNKKDGANGYVSLYARIDNSTLI-SDPKDVYAEVKFFVYNRVYDKYYT--YQET 194
Query: 62 AVIRLHSMKRECGIDKLIPLQAFKEPSNGYLVD-DSCVFGAEIFVIKPTGKGEALSI--- 117
R H K E G+ P F P+ GY+ D + CVFG +IFV + + E S
Sbjct: 195 EARRFHLFKPEYGVPLFQPTSVFSTPTTGYIFDGEQCVFGIDIFVAQTFKEWEVFSFEEN 254
Query: 118 VKVPAQAGN 126
+K P GN
Sbjct: 255 IKTPFTHGN 263
>gi|297822373|ref|XP_002879069.1| hypothetical protein ARALYDRAFT_901589 [Arabidopsis lyrata subsp.
lyrata]
gi|297324908|gb|EFH55328.1| hypothetical protein ARALYDRAFT_901589 [Arabidopsis lyrata subsp.
lyrata]
Length = 293
Score = 78.6 bits (192), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 49/155 (31%), Positives = 73/155 (47%), Gaps = 20/155 (12%)
Query: 1 RLILYPNGNKKGQGTGHISLYLALDESTYFPNNPWEVFVNFTFFVQDRIKNEYLAIRYDD 60
R+ILYP GN K G+ IS+Y+ LD S+ EVF +F FFV ++ +N
Sbjct: 52 RMILYPKGNDKDNGSDFISMYVELDSSS-LSTPSTEVFADFRFFVLNKKEN--------- 101
Query: 61 GAVIRLHSMKRECGIDKLIPLQAFKEPSNGYLVDDSCVFGAEIFVIKPTGKGEALSIVKV 120
K G+ +++PL FK+P NGY+ C FG ++ V P E LS +
Sbjct: 102 ---------KSVWGLPQVLPLSTFKDPENGYVCLGQCEFGVDVIVAPPPTNWEILSFDEK 152
Query: 121 PAQAGNILRWKIPNFSDLRDPEYYSSEFNAGGREW 155
I W + N ++ + S F+ GG+ W
Sbjct: 153 HVYPYKI-SWPVKNIFEILGHCHTSQRFSVGGKTW 186
>gi|224111970|ref|XP_002332856.1| predicted protein [Populus trichocarpa]
gi|222837181|gb|EEE75560.1| predicted protein [Populus trichocarpa]
Length = 233
Score = 74.3 bits (181), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 37/93 (39%), Positives = 53/93 (56%), Gaps = 4/93 (4%)
Query: 65 RLHSMKRECGIDKLIPLQAFKEPSNGYLVDDSCVFGAEIFVI--KPTGKGEALSIVKVPA 122
R H +K ECG D+ I L F + G++++D+CV GAE+FV + GKGE LS+ K P
Sbjct: 81 RFHGLKLECGFDQFIKLSTFNDARYGFVLEDTCVLGAEVFVCGERSRGKGEVLSMKKDP- 139
Query: 123 QAGNILRWKIPNFSDLRDPEYYSSEFNAGGREW 155
+ WKI +FS L + S F+ G +W
Sbjct: 140 -TASKYTWKIVDFSKLDEKRQESQIFSTGDHQW 171
>gi|297815102|ref|XP_002875434.1| hypothetical protein ARALYDRAFT_484604 [Arabidopsis lyrata subsp.
lyrata]
gi|297321272|gb|EFH51693.1| hypothetical protein ARALYDRAFT_484604 [Arabidopsis lyrata subsp.
lyrata]
Length = 369
Score = 73.9 bits (180), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 50/156 (32%), Positives = 76/156 (48%), Gaps = 7/156 (4%)
Query: 2 LILYPNGN-KKGQGTGHISLYLALDESTYFPNNPWEVFVNFTFFVQDRIKNEYLAIRYDD 60
LI+YP GN K+G +S+Y+ +D ST N+P EV+ FF+ +R +++Y + D
Sbjct: 115 LIVYPKGNVKEGAPGDWVSMYVQIDNSTLL-NSPKEVYAEVKFFIYNRKEDKYFTYQETD 173
Query: 61 GAVIRLHSMKRECGIDKLIPLQAFKEPSNGYLVD-DSCVFGAEIFVIKPTGKGEALSIVK 119
R K G + P G+L D D+ +FG ++FV + K E S K
Sbjct: 174 AK--RFFLFKPYWGYGNVRSYGDVANPDAGWLFDGDNVLFGVDVFVTEVFNKWEVFSFTK 231
Query: 120 VPAQAGNILRWKIPNFSDLRDPEYYSSEFNAGGREW 155
+ + +W + NFS L Y S +F GGR W
Sbjct: 232 --SLHNRLYKWTLTNFSLLEKEYYVSDKFVIGGRSW 265
>gi|15217864|ref|NP_176694.1| TRAF-like family protein [Arabidopsis thaliana]
gi|42572003|ref|NP_974092.1| TRAF-like family protein [Arabidopsis thaliana]
gi|4646198|gb|AAD26871.1|AC007230_5 T23K8.6 [Arabidopsis thaliana]
gi|22135856|gb|AAM91510.1| unknown protein [Arabidopsis thaliana]
gi|24899677|gb|AAN65053.1| unknown protein [Arabidopsis thaliana]
gi|332196216|gb|AEE34337.1| TRAF-like family protein [Arabidopsis thaliana]
gi|332196217|gb|AEE34338.1| TRAF-like family protein [Arabidopsis thaliana]
Length = 296
Score = 73.2 bits (178), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 47/157 (29%), Positives = 81/157 (51%), Gaps = 15/157 (9%)
Query: 1 RLILYPNGNKKGQGTGHISLYLALDESTYFPNNPWEVFVNFTFFVQDRIKNEYLAIRYDD 60
RL+++P GN+ G+G +S+Y+ ST P +VF TFFV + +YL+ + D
Sbjct: 47 RLVVHPKGNEADNGSGFVSMYVECLSST---TPPIDVFAYLTFFVFSEEEKKYLS--FQD 101
Query: 61 GAVIRLHSMKRECGIDKLIPLQAFKEPSNGYLV-DDSCVFGAEIFVI-KPTGKGEALSIV 118
V R +S K G+ K +P++ K+ + G+++ + FGA + ++ +P GE L
Sbjct: 102 VEVKRFNSSKTVWGLSKALPVETLKDRAKGFILYGEEHEFGAHVKIVSRPASFGEDLPFH 161
Query: 119 KVPAQAGNILRWKIPNFSDLRDPEYYSSEFNAGGREW 155
K W I +F+ L +Y S F+ G ++W
Sbjct: 162 K--------FSWTIRDFALLEQNDYVSKTFHMGEKDW 190
>gi|297840871|ref|XP_002888317.1| hypothetical protein ARALYDRAFT_893885 [Arabidopsis lyrata subsp.
lyrata]
gi|297334158|gb|EFH64576.1| hypothetical protein ARALYDRAFT_893885 [Arabidopsis lyrata subsp.
lyrata]
Length = 297
Score = 72.8 bits (177), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 49/157 (31%), Positives = 82/157 (52%), Gaps = 15/157 (9%)
Query: 1 RLILYPNGNKKGQGTGHISLYLALDESTYFPNNPWEVFVNFTFFVQDRIKNEYLAIRYDD 60
RL++YP GN++ G+G +S+Y+ ST P +VF TFFV + +YL+I+ D
Sbjct: 48 RLVVYPKGNEEDNGSGFVSMYVECLSST---TPPIDVFTYLTFFVFSEEEKKYLSIQ--D 102
Query: 61 GAVIRLHSMKRECGIDKLIPLQAFKEPSNGYLV-DDSCVFGAEIFVI-KPTGKGEALSIV 118
V R +S K G+ K + ++ K+ + G+++ + FGA + ++ +P GE L
Sbjct: 103 VEVKRFNSSKTVWGLSKALSIETLKDRAKGFILYGELHEFGAHVKIVSRPDSFGEDLPFH 162
Query: 119 KVPAQAGNILRWKIPNFSDLRDPEYYSSEFNAGGREW 155
K W I +FS LR + S F+ G ++W
Sbjct: 163 K--------FSWTIRDFSLLRQNDCVSKTFHMGEKDW 191
>gi|297842109|ref|XP_002888936.1| hypothetical protein ARALYDRAFT_895220 [Arabidopsis lyrata subsp.
lyrata]
gi|297334777|gb|EFH65195.1| hypothetical protein ARALYDRAFT_895220 [Arabidopsis lyrata subsp.
lyrata]
Length = 406
Score = 72.8 bits (177), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 47/154 (30%), Positives = 76/154 (49%), Gaps = 6/154 (3%)
Query: 2 LILYPNGNKKGQGTGHISLYLALDESTYFPNNPWEVFVNFTFFVQDRIKNEYLAIRYDDG 61
++YPN NK G++SLY+ +D S+ NP +V+ TF V ++Y ++ +
Sbjct: 188 FLIYPNENKPQGSGGYVSLYVRIDNSSLIA-NPEDVYAEITFLVYKSTIDKYHILK--ET 244
Query: 62 AVIRLHSMKRECGIDKLIPLQAFKEPSNGYLVD-DSCVFGAEIFVIKPTGKGEALSIVKV 120
R H +++ G + + F P +G++ + VFG +IFV KP E S K
Sbjct: 245 KAQRFHLFRQQWGQLNFLEIGYFLNPVHGFIFNGGQSVFGVDIFVAKPFENWEVFSYEKN 304
Query: 121 PAQAGNILRWKIPNFSDLRDPEYYSSEFNAGGRE 154
I W++ NFS L Y S F++GGR+
Sbjct: 305 IRDP--IFDWRLNNFSTLDRDSYTSGSFSSGGRK 336
>gi|297840873|ref|XP_002888318.1| hypothetical protein ARALYDRAFT_893886 [Arabidopsis lyrata subsp.
lyrata]
gi|297334159|gb|EFH64577.1| hypothetical protein ARALYDRAFT_893886 [Arabidopsis lyrata subsp.
lyrata]
Length = 296
Score = 72.0 bits (175), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 48/157 (30%), Positives = 81/157 (51%), Gaps = 15/157 (9%)
Query: 1 RLILYPNGNKKGQGTGHISLYLALDESTYFPNNPWEVFVNFTFFVQDRIKNEYLAIRYDD 60
RL++YP GN++ G G +S+Y+ ST P +VF TFFV + +YL+I+ D
Sbjct: 47 RLVVYPKGNEEDNGRGFVSMYVECLSST---TPPIDVFAYLTFFVFSEEEKKYLSIQ--D 101
Query: 61 GAVIRLHSMKRECGIDKLIPLQAFKEPSNGYLV-DDSCVFGAEIFVI-KPTGKGEALSIV 118
V R ++ K G+ K + ++ K+ + G+++ + FGA + ++ +P GE L
Sbjct: 102 VEVKRFNTSKTVWGLSKALSIETLKDCAKGFILYGELHEFGAHVKIVSRPVSFGEDLHFH 161
Query: 119 KVPAQAGNILRWKIPNFSDLRDPEYYSSEFNAGGREW 155
K W I +FS LR + S F+ G ++W
Sbjct: 162 K--------FSWTIRDFSLLRQNDCVSKTFHMGEKDW 190
>gi|297837887|ref|XP_002886825.1| hypothetical protein ARALYDRAFT_475528 [Arabidopsis lyrata subsp.
lyrata]
gi|297332666|gb|EFH63084.1| hypothetical protein ARALYDRAFT_475528 [Arabidopsis lyrata subsp.
lyrata]
Length = 297
Score = 71.6 bits (174), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 48/157 (30%), Positives = 82/157 (52%), Gaps = 15/157 (9%)
Query: 1 RLILYPNGNKKGQGTGHISLYLALDESTYFPNNPWEVFVNFTFFVQDRIKNEYLAIRYDD 60
RL++YP GN++ G G +S+Y+ ST P +VF TFF+ + +YL+I+ D
Sbjct: 48 RLVVYPKGNEEDNGMGFVSMYVECLSST---TPPIDVFAYLTFFIFSEEEKKYLSIQ--D 102
Query: 61 GAVIRLHSMKRECGIDKLIPLQAFKEPSNGYLV-DDSCVFGAEIFVI-KPTGKGEALSIV 118
V R +S K G+ + + ++A K+ + G+++ + FGA + ++ +P GE L
Sbjct: 103 VEVKRFNSSKTVWGLSQALSIEALKDRAKGFILYGELHEFGAHVKIVSRPDSFGEDLPFH 162
Query: 119 KVPAQAGNILRWKIPNFSDLRDPEYYSSEFNAGGREW 155
K W I +FS LR + S F+ G ++W
Sbjct: 163 K--------FSWTIRDFSLLRQNDCVSKTFHMGEKDW 191
>gi|62321778|dbj|BAD95403.1| hypothetical protein [Arabidopsis thaliana]
Length = 208
Score = 70.1 bits (170), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 41/103 (39%), Positives = 54/103 (52%), Gaps = 4/103 (3%)
Query: 53 YLAIRYDDGAVIRLHSMKRECGIDKLIPLQAFKEPSNGYLVDDSCVFGAEIFVIKPTGKG 112
YL ++ DG V R + K+E G KLIPL F + + GYL D FGAEIF
Sbjct: 1 YLIVK--DGIVKRYNDAKKEWGYGKLIPLTTFLDTNEGYLEQDIASFGAEIFSGTAVQVQ 58
Query: 113 EALSIVKVPAQAGNILRWKIPNFSDLRDPEYYSSEFNAGGREW 155
E ++ + P N+ WKI +FS+L D YYS +F R W
Sbjct: 59 EKVTFISNPPN--NVFTWKILHFSNLEDKFYYSDDFLVEDRYW 99
>gi|297835196|ref|XP_002885480.1| hypothetical protein ARALYDRAFT_318939 [Arabidopsis lyrata subsp.
lyrata]
gi|297331320|gb|EFH61739.1| hypothetical protein ARALYDRAFT_318939 [Arabidopsis lyrata subsp.
lyrata]
Length = 241
Score = 68.6 bits (166), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 37/137 (27%), Positives = 69/137 (50%), Gaps = 5/137 (3%)
Query: 20 LYLALDESTYFPNNPWEVFVNFTFFVQDRIKNEYLAIRYDDGAVIRLHSMKRECGIDKLI 79
+Y+ +D + +V FFV ++ ++Y IR D V R ++++ G+ +++
Sbjct: 1 MYVEIDSTNLLSTPLTDVVACLIFFVYNKKTDKYFTIR--DTEVKRFNALRTVWGLSQVL 58
Query: 80 PLQAFKEPSNGYLVD-DSCVFGAEIFVIKPTGKGEALSIVKVPAQAGNILRWKIPNFSDL 138
L+ F +P NGY+ + D C FG ++ V K E +S + + W + F +L
Sbjct: 59 SLETFNDPKNGYIFEGDQCEFGVDVLVAPSLTKWEVVSFNQKISNPK--FSWTLKKFKEL 116
Query: 139 RDPEYYSSEFNAGGREW 155
++ Y S +F GGR+W
Sbjct: 117 KEEFYDSVKFLVGGRQW 133
>gi|297841695|ref|XP_002888729.1| hypothetical protein ARALYDRAFT_315967 [Arabidopsis lyrata subsp.
lyrata]
gi|297334570|gb|EFH64988.1| hypothetical protein ARALYDRAFT_315967 [Arabidopsis lyrata subsp.
lyrata]
Length = 230
Score = 67.8 bits (164), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 37/121 (30%), Positives = 65/121 (53%), Gaps = 5/121 (4%)
Query: 36 EVFVNFTFFVQDRIKNEYLAIRYDDGAVIRLHSMKRECGIDKLIPLQAFKEPSNGYLVDD 95
+VF FFV ++ +N+Y I+ D V R ++++ G+ +++P F P GY+ +
Sbjct: 8 QVFAELRFFVYNKKENKYFTIQ--DVEVKRFNALRMVWGLIQVLPYDTFINPEFGYIFEG 65
Query: 96 -SCVFGAEIFVIKPTGKGEALSIVKVPAQAGNILRWKIPNFSDLRDPEYYSSEFNAGGRE 154
C FG ++ V P E LS + + W + +FSDL++ Y S++F+ GG+E
Sbjct: 66 GECEFGVDVLVAPPLTNWEILSFDEKLSHPK--FSWTVKSFSDLKEDVYTSNKFSMGGKE 123
Query: 155 W 155
W
Sbjct: 124 W 124
>gi|18406229|ref|NP_564729.1| TRAF-like protein [Arabidopsis thaliana]
gi|8979946|gb|AAF82260.1|AC008051_11 Identical to gene ZW9 from Arabidopsis thaliana gb|AB028194 and
contains two MATH PF|00917 domains. ESTs gb|AI996327,
gb|AI997139, gb|AA712716, gb|BE037713, gb|BE037714,
gb|F14095, gb|F14009, gb|N38170, gb|T44357, gb|T45202
come from this gene [Arabidopsis thaliana]
gi|12083246|gb|AAG48782.1|AF332419_1 unknown protein [Arabidopsis thaliana]
gi|16930453|gb|AAL31912.1|AF419580_1 At1g58270/F19C14_8 [Arabidopsis thaliana]
gi|6520139|dbj|BAA87936.1| ZW9 [Arabidopsis thaliana]
gi|332195406|gb|AEE33527.1| TRAF-like protein [Arabidopsis thaliana]
Length = 396
Score = 67.4 bits (163), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 44/158 (27%), Positives = 77/158 (48%), Gaps = 12/158 (7%)
Query: 2 LILYPNGNKKGQGTGHISLYLALDESTYFPNNPWEVFVNFTFFVQDRIKNEYLAIRYDDG 61
L++YP G++S+Y+ +D S+ NP +V+ TF ++Y + +
Sbjct: 132 LLIYPVIYIPTDSGGYVSIYVRVDNSSLI-TNPKDVYAEITFLAYKSSTDKYQISQETEA 190
Query: 62 AVIRLHSMKRECGIDKLIPLQAFKEPSNGYLVD-DSCVFGAEIFVIKPTGKGEALSI--- 117
R H K++ G+ + +P+ F+ P+ GY + +S VFG +I ++KP E S
Sbjct: 191 Q--RFHLFKQQWGLLQFLPIYYFENPAYGYFFEGESVVFGVDINIVKPFENWEVFSNEQN 248
Query: 118 VKVPAQAGNILRWKIPNFSDLRDPEYYSSEFNAGGREW 155
++ P I W++ FS Y S F++GGR W
Sbjct: 249 IRDP-----IFEWRLTKFSTRFLDSYTSDSFSSGGRNW 281
>gi|22531020|gb|AAM97014.1| expressed protein [Arabidopsis thaliana]
Length = 290
Score = 67.4 bits (163), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 44/158 (27%), Positives = 77/158 (48%), Gaps = 12/158 (7%)
Query: 2 LILYPNGNKKGQGTGHISLYLALDESTYFPNNPWEVFVNFTFFVQDRIKNEYLAIRYDDG 61
L++YP G++S+Y+ +D S+ NP +V+ TF ++Y + +
Sbjct: 26 LLIYPVIYIPTDSGGYVSIYVRVDNSS-LITNPKDVYAEITFLAYKSSTDKYQISQETEA 84
Query: 62 AVIRLHSMKRECGIDKLIPLQAFKEPSNGYLVD-DSCVFGAEIFVIKPTGKGEALSI--- 117
R H K++ G+ + +P+ F+ P+ GY + +S VFG +I ++KP E S
Sbjct: 85 Q--RFHLFKQQWGLLQFLPIYYFENPAYGYFFEGESVVFGVDINIVKPFENWEVFSNEQN 142
Query: 118 VKVPAQAGNILRWKIPNFSDLRDPEYYSSEFNAGGREW 155
++ P I W++ FS Y S F++GGR W
Sbjct: 143 IRDP-----IFEWRLTKFSTRFLDSYTSDSFSSGGRNW 175
>gi|28059371|gb|AAO30052.1| expressed protein [Arabidopsis thaliana]
Length = 290
Score = 67.4 bits (163), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 44/158 (27%), Positives = 77/158 (48%), Gaps = 12/158 (7%)
Query: 2 LILYPNGNKKGQGTGHISLYLALDESTYFPNNPWEVFVNFTFFVQDRIKNEYLAIRYDDG 61
L++YP G++S+Y+ +D S+ NP +V+ TF ++Y + +
Sbjct: 26 LLIYPVIYIPTDSGGYVSIYVRVDNSS-LITNPKDVYAEITFLAYKSSTDKYQISQETEA 84
Query: 62 AVIRLHSMKRECGIDKLIPLQAFKEPSNGYLVD-DSCVFGAEIFVIKPTGKGEALSI--- 117
R H K++ G+ + +P+ F+ P+ GY + +S VFG +I ++KP E S
Sbjct: 85 Q--RFHLFKQQWGLLQFLPIYYFENPAYGYFFEGESVVFGVDINIVKPFENWEVFSNEQN 142
Query: 118 VKVPAQAGNILRWKIPNFSDLRDPEYYSSEFNAGGREW 155
++ P I W++ FS Y S F++GGR W
Sbjct: 143 IRDP-----IFEWRLTKFSTRFLDSYTSDSFSSGGRNW 175
>gi|297805306|ref|XP_002870537.1| hypothetical protein ARALYDRAFT_915883 [Arabidopsis lyrata subsp.
lyrata]
gi|297316373|gb|EFH46796.1| hypothetical protein ARALYDRAFT_915883 [Arabidopsis lyrata subsp.
lyrata]
Length = 256
Score = 67.0 bits (162), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 53/155 (34%), Positives = 70/155 (45%), Gaps = 8/155 (5%)
Query: 2 LILYPNGNKKGQGTGHISLYLALDESTYFPNNPWEVFVNFTFFVQDRIKNEYLAIRYDDG 61
IL P+GNK GT IS Y+A+D S N EV+ + F V + ++YL D
Sbjct: 109 FILQPSGNKTNLGT-WISAYVAIDPSGLVGENR-EVYADLKFLVYSKAYDQYLT--SIDT 164
Query: 62 AVIRLHSMKRECGIDKLIPLQAFKEPSNGYLVD-DSCVFGAEIFVIKPTGKGEALSIVKV 120
+ R H + G F Y+ D D CVFG +I V K E LSI K
Sbjct: 165 EMRRFHQFRTTWGTPNFTRHFDFNAKDKEYIFDNDQCVFGVDISVYPYFNKWEVLSIDKT 224
Query: 121 PAQAGNILRWKIPNFSDLRDPEYYSSEFNAGGREW 155
+ WK+ FS L Y S EF+ GG++W
Sbjct: 225 VYGPKS---WKLKKFSTLIKDFYMSDEFSIGGKKW 256
>gi|297840731|ref|XP_002888247.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297334088|gb|EFH64506.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
Length = 368
Score = 66.6 bits (161), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 44/141 (31%), Positives = 68/141 (48%), Gaps = 12/141 (8%)
Query: 19 SLYLALDESTYFPNNPWEVFVNFTFFVQDRIKNEYLAIRYDDGAVIRLHSMKRECGIDKL 78
SLYL +D S+ NP +V+ + TF ++Y + + D R H +++ G
Sbjct: 141 SLYLRIDNSSLI-TNPKDVYADITFLAYKSSTDKYQSYQETDAQ--RFHLFRQQWGQITF 197
Query: 79 IPLQAFKEPSNGYLVDD-SCVFGAEIFVIKPTGKGEALSI---VKVPAQAGNILRWKIPN 134
+P+ F+ P GY D S VFG +I ++KP E S ++ P I W++
Sbjct: 198 LPIAYFENPGYGYSFDGGSVVFGVDINIVKPFENWEVFSNEQNIRDP-----IFEWRLTK 252
Query: 135 FSDLRDPEYYSSEFNAGGREW 155
FS L Y S F++GGR W
Sbjct: 253 FSTLFKDSYTSGSFSSGGRNW 273
>gi|9279768|dbj|BAB01394.1| unnamed protein product [Arabidopsis thaliana]
Length = 309
Score = 66.6 bits (161), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 45/161 (27%), Positives = 71/161 (44%), Gaps = 14/161 (8%)
Query: 1 RLILYPNGNKKGQGTGHISLYLALDESTYFPNNPWEVFVNFTFFVQDRIKNEYLAIRY-- 58
RL++YP GN K +G+G IS+Y+ +D + + VF FFV ++ ++Y I+
Sbjct: 49 RLVIYPKGNAKDEGSGFISMYVEIDSTNLLSSPLTGVFAYLVFFVYNKKTDKYFTIKVCF 108
Query: 59 ----DDGAVIRLHSMKRECGIDKLIPLQAFKEPSNGYLVDDSCVFGAEIFVIKPTGKGEA 114
V H ID L+ F N + D C FG ++ V K E
Sbjct: 109 PFSIHSLLVFFTHRQFMHDVIDS--ELKRF----NAFRTGDQCEFGVDVLVAPSLTKWEV 162
Query: 115 LSIVKVPAQAGNILRWKIPNFSDLRDPEYYSSEFNAGGREW 155
+S + W + F +L++ Y S +F GGR+W
Sbjct: 163 VSFNQKILDPK--FSWSLKKFKELKEELYNSDKFLVGGRQW 201
>gi|297840869|ref|XP_002888316.1| hypothetical protein ARALYDRAFT_893883 [Arabidopsis lyrata subsp.
lyrata]
gi|297334157|gb|EFH64575.1| hypothetical protein ARALYDRAFT_893883 [Arabidopsis lyrata subsp.
lyrata]
Length = 297
Score = 65.1 bits (157), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 45/159 (28%), Positives = 78/159 (49%), Gaps = 19/159 (11%)
Query: 1 RLILYPNGNKKGQGTGHISLYLALDESTYFPNNPWEVFVNFTFFVQDRIKNEYLAIRYDD 60
RL++YP GN++ G G +S+Y+ ST P +VF + TFFV + +YL+I+ D
Sbjct: 48 RLVVYPKGNEEDNGRGFVSMYVECLSST---TPPIDVFAHLTFFVFSEEEKKYLSIQ--D 102
Query: 61 GAVIRLHSMKRECGIDKLIPLQAFKEPSNGYLV-DDSCVFGAEIFVIKPTGKGEALSIVK 119
V R +S K G+ + + ++ K+ + G+++ + FGA + + P
Sbjct: 103 VEVKRFNSSKTVWGLSQALSVETLKDRAKGFILYGEEHEFGAHVKIALP----------P 152
Query: 120 VPAQAG---NILRWKIPNFSDLRDPEYYSSEFNAGGREW 155
VP + W I +FS L+ + S F+ G + W
Sbjct: 153 VPVDLNLPFHKFSWSIRDFSCLKQNDCVSKTFHMGEKNW 191
>gi|15222410|ref|NP_177124.1| TRAF-like family protein [Arabidopsis thaliana]
gi|10092289|gb|AAG12701.1|AC021046_2 hypothetical protein; 234-1214 [Arabidopsis thaliana]
gi|12325195|gb|AAG52546.1|AC013289_13 hypothetical protein; 70299-71279 [Arabidopsis thaliana]
gi|332196839|gb|AEE34960.1| TRAF-like family protein [Arabidopsis thaliana]
Length = 231
Score = 65.1 bits (157), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 36/123 (29%), Positives = 64/123 (52%), Gaps = 5/123 (4%)
Query: 34 PWEVFVNFTFFVQDRIKNEYLAIRYDDGAVIRLHSMKRECGIDKLIPLQAFKEPSNGYLV 93
P E F F+V ++ +N+Y I+ D V R ++++ G+ K++ F P NG++
Sbjct: 6 PTEAFAELRFYVYNKKENKYFTIQ--DVEVKRFNALRMVWGLLKVLSYDTFTNPENGFIF 63
Query: 94 DD-SCVFGAEIFVIKPTGKGEALSIVKVPAQAGNILRWKIPNFSDLRDPEYYSSEFNAGG 152
+ C FG ++ V P E LS + + W + NFS+L++ Y S+++ GG
Sbjct: 64 EGGECEFGVDVLVAPPLTNWEILSFDEKLSPPK--FSWNLKNFSELKEDVYTSNKYPMGG 121
Query: 153 REW 155
+EW
Sbjct: 122 KEW 124
>gi|357129738|ref|XP_003566518.1| PREDICTED: uncharacterized protein LOC100841018 [Brachypodium
distachyon]
Length = 308
Score = 63.5 bits (153), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 44/159 (27%), Positives = 69/159 (43%), Gaps = 12/159 (7%)
Query: 2 LILYPNGNKKGQGTGHISLYLALDESTYFPNNPWEVFVNFTFFVQDRIKNEYLAIRYDDG 61
L L P K ++SL L L +++ + E + F + Q K+ + +
Sbjct: 55 LQLNPRDTKSDDTDEYVSLRLELSQTSVRSDTVVETYFKFLIYDQSYGKHHQQNVNH--- 111
Query: 62 AVIRLHSMKRECGIDKLIPLQAFKEPSNGYLVDDSCVFGAE---IFVIKPTGKGEALSIV 118
+ G LIPL KE S+G+LV++ CVFG E + +K G E L +
Sbjct: 112 ---KFQPTSTSSGTSCLIPLTKLKEQSSGFLVNNCCVFGVEFGAVVTVKANGASETLFVQ 168
Query: 119 KVPAQAGN--ILRWKIPNFSDLRDPEYYSSEFNAGGREW 155
KV + + + W I +F L+ P S EF G +W
Sbjct: 169 KVNSICSDPKVYTWNIDDFFALKSPN-NSPEFELCGHKW 206
>gi|15231117|ref|NP_188673.1| TRAF-like family protein [Arabidopsis thaliana]
gi|9294557|dbj|BAB02820.1| unnamed protein product [Arabidopsis thaliana]
gi|51970536|dbj|BAD43960.1| unknown protein [Arabidopsis thaliana]
gi|51970744|dbj|BAD44064.1| unknown protein [Arabidopsis thaliana]
gi|51970756|dbj|BAD44070.1| unknown protein [Arabidopsis thaliana]
gi|332642850|gb|AEE76371.1| TRAF-like family protein [Arabidopsis thaliana]
Length = 375
Score = 63.5 bits (153), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 43/153 (28%), Positives = 75/153 (49%), Gaps = 5/153 (3%)
Query: 2 LILYPNGNKKGQGTGHISLYLALDESTYFPNNPWEVFVNFTFFVQDRIKNEYLAIRYDDG 61
L ++PNG +G++SLY+ L EST + V+ + F++ + + +Y ++ D
Sbjct: 121 LKVHPNGLTWDGTSGYVSLYVLLHESTPITADQ-VVYADLRFYIFNNNEKKYFTVQ--DT 177
Query: 62 AVIRLHSMKRECGIDKLIPLQAFKEPSNGYLVDDSCVFGAEIFVIKPTGKGEALSIVKVP 121
V + + KR G K++ F++ NGY+ D+ C FG ++ V K E+L + +
Sbjct: 178 NVWKFTAPKRLLGFPKVMSADQFEDLRNGYIYDNHCEFGVDVTVASHYQKSESLFVTE-- 235
Query: 122 AQAGNILRWKIPNFSDLRDPEYYSSEFNAGGRE 154
I + + FS L Y S F+ GGR
Sbjct: 236 KFDNPIFTYALLRFSTLLKESYQSDVFSIGGRS 268
>gi|297822541|ref|XP_002879153.1| hypothetical protein ARALYDRAFT_901780 [Arabidopsis lyrata subsp.
lyrata]
gi|297324992|gb|EFH55412.1| hypothetical protein ARALYDRAFT_901780 [Arabidopsis lyrata subsp.
lyrata]
Length = 353
Score = 62.8 bits (151), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 41/142 (28%), Positives = 70/142 (49%), Gaps = 6/142 (4%)
Query: 15 TGHISLYLALDESTYFPNNPWEVFVNFTFFVQDRIKNEYLAIRYDDGAVIRLHSMKRECG 74
+G++SLY+A+D+ST E++ + F++ ++ + +YL I+ D + + + K G
Sbjct: 106 SGYLSLYVAIDKSTPIAAQK-EIYADLRFYIFNKNERKYLTIQ--DTDIWKFNVFKTMWG 162
Query: 75 IDKLIPLQAFKEPSNGYLVD-DSCVFGAEIFVIKPTGKGEALSIVKVPAQAGNILRWKIP 133
+++ + FK P+NGYL D D C FG ++ + K E S+ + W I
Sbjct: 163 FSQVLTIDTFKNPTNGYLYDGDHCEFGVDVTIPPLYEKSEFFSVTENFHNPR--FTWTIQ 220
Query: 134 NFSDLRDPEYYSSEFNAGGREW 155
FS L Y S F R W
Sbjct: 221 RFSMLLKDIYLSDMFYIRVRNW 242
>gi|224138194|ref|XP_002322753.1| predicted protein [Populus trichocarpa]
gi|222867383|gb|EEF04514.1| predicted protein [Populus trichocarpa]
Length = 1117
Score = 60.1 bits (144), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 35/107 (32%), Positives = 59/107 (55%), Gaps = 8/107 (7%)
Query: 1 RLILYPNGNKKGQGTGHISLYLALDESTYFPNNPWEVFVNFTFFVQDRIKNEYLAIRYDD 60
R++++P GN H+S+YL + +ST P W + F+ V ++I N+Y +IR D
Sbjct: 83 RVLIFPKGN----NVDHLSMYLDVADSTALPYG-WSRYAQFSLAVVNQIHNKY-SIRKDT 136
Query: 61 GAVIRLHSMKRECGIDKLIPLQAFKEPSNGYLVDDSCVFGAEIFVIK 107
+ ++ + + G +PL +PS GYLV+D+ V AE+ V K
Sbjct: 137 QH--QFNARESDWGFTSFMPLSELYDPSRGYLVNDTVVIEAEVAVCK 181
>gi|15217836|ref|NP_176685.1| meprin and TRAF homology domain-containing protein [Arabidopsis
thaliana]
gi|6227004|gb|AAF06040.1|AC009360_5 F16G16.5 [Arabidopsis thaliana]
gi|332196201|gb|AEE34322.1| meprin and TRAF homology domain-containing protein [Arabidopsis
thaliana]
Length = 228
Score = 59.7 bits (143), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 39/119 (32%), Positives = 64/119 (53%), Gaps = 12/119 (10%)
Query: 1 RLILYPNGNKKGQGTGHISLYLALDESTYFPNNPWEVFVNFTFFVQDRIKNEYLAIRYDD 60
RL++YP GN+ G G +S+Y+ ST P +VFV TFFV + YL+I+ D
Sbjct: 47 RLVVYPKGNEADNGRGFVSMYVECLSST---TPPIDVFVYLTFFVFSEEEKRYLSIQ--D 101
Query: 61 GAVIRLHSMKRECGIDKLIPLQAFKEPSNGYLVDDSCVFGAEIFVIK-----PTGKGEA 114
V R +S K G+ +++P++ K+ + G+++ S +F ++K P G EA
Sbjct: 102 VEVKRFNSSKTVWGLSQVLPVETLKDRAKGFIL--SRLFHNPPLLVKTLKLYPKGDSEA 158
>gi|356534813|ref|XP_003535946.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 13 [Glycine max]
Length = 1121
Score = 59.3 bits (142), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 33/107 (30%), Positives = 61/107 (57%), Gaps = 8/107 (7%)
Query: 1 RLILYPNGNKKGQGTGHISLYLALDESTYFPNNPWEVFVNFTFFVQDRIKNEYLAIRYDD 60
R++++P GN G GH+S+Y+ + +S P W + +F V ++I ++Y +IR D
Sbjct: 91 RILIFPKGN----GAGHLSMYIDVADSATLPYG-WSRYAHFNLTVVNQIHSKY-SIRKDS 144
Query: 61 GAVIRLHSMKRECGIDKLIPLQAFKEPSNGYLVDDSCVFGAEIFVIK 107
+ ++ + + G +PL +P+ GYLV+D+C+ A+I V K
Sbjct: 145 QH--QFNARESDWGFINFMPLAELYDPARGYLVNDTCIVEADISVRK 189
>gi|15222407|ref|NP_177123.1| TRAF-like family protein [Arabidopsis thaliana]
gi|10092290|gb|AAG12702.1|AC021046_3 hypothetical protein; 2016-3339 [Arabidopsis thaliana]
gi|332196838|gb|AEE34959.1| TRAF-like family protein [Arabidopsis thaliana]
Length = 294
Score = 59.3 bits (142), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 44/151 (29%), Positives = 66/151 (43%), Gaps = 22/151 (14%)
Query: 7 NGNKKGQGTGHISLYLALDESTYFPNN-PWEVFVNFTFFVQDRIKNEYLAIRYDDGAVIR 65
GN K G+G IS+Y+ LD S+ + P EVF FFV ++ +N+Y D + R
Sbjct: 57 TGNVKDNGSGFISMYVELDSSSLMESKPPTEVFAELRFFVYNKKQNKYFT---KDVEIKR 113
Query: 66 LHSMKRECGIDKLIPLQAFKEPSNGYLVDDSCVFGAEIFVIKPTGKGEALSIVKVPAQAG 125
++K G+ K + C FG ++ V P E LS
Sbjct: 114 FDALKMVWGLPK----------------GNECEFGVDVIVAPPLTNWEILSFHDEKLSYP 157
Query: 126 NILRWKIPNFSDLRDPEYYS-SEFNAGGREW 155
+ W + NFS ++ E + F+ GGREW
Sbjct: 158 KVT-WSVKNFSQWKENECSKPNRFSIGGREW 187
>gi|224091501|ref|XP_002309275.1| predicted protein [Populus trichocarpa]
gi|222855251|gb|EEE92798.1| predicted protein [Populus trichocarpa]
Length = 1239
Score = 59.3 bits (142), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 35/107 (32%), Positives = 59/107 (55%), Gaps = 8/107 (7%)
Query: 1 RLILYPNGNKKGQGTGHISLYLALDESTYFPNNPWEVFVNFTFFVQDRIKNEYLAIRYDD 60
R++++P GN H+S+YL + +ST P W + F+ V ++I N+Y +IR D
Sbjct: 82 RVLIFPKGN----NVDHLSMYLDVADSTTLPYG-WSRYAQFSLAVVNQIHNKY-SIRKDT 135
Query: 61 GAVIRLHSMKRECGIDKLIPLQAFKEPSNGYLVDDSCVFGAEIFVIK 107
+ ++ + + G +PL +PS GYLV+D+ V AE+ V K
Sbjct: 136 QH--QFNARESDWGFTSFMPLSELYDPSRGYLVNDTVVIEAEVAVRK 180
>gi|255317092|gb|ACU01868.1| ubiquitin specific protease 12 variant 1 [Glycine max]
Length = 989
Score = 58.9 bits (141), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 33/107 (30%), Positives = 61/107 (57%), Gaps = 8/107 (7%)
Query: 1 RLILYPNGNKKGQGTGHISLYLALDESTYFPNNPWEVFVNFTFFVQDRIKNEYLAIRYDD 60
R++++P GN G GH+S+Y+ + +S P W + +F V ++I ++Y +IR D
Sbjct: 91 RILIFPKGN----GAGHLSMYIDVADSATLPYG-WSRYAHFNLTVVNQIHSKY-SIRKDS 144
Query: 61 GAVIRLHSMKRECGIDKLIPLQAFKEPSNGYLVDDSCVFGAEIFVIK 107
+ ++ + + G +PL +P+ GYLV+D+C+ A+I V K
Sbjct: 145 QH--QFNARESDWGFINFMPLAELYDPARGYLVNDTCIVEADISVRK 189
>gi|225439303|ref|XP_002267555.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 12-like [Vitis
vinifera]
Length = 1117
Score = 58.5 bits (140), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 33/107 (30%), Positives = 58/107 (54%), Gaps = 8/107 (7%)
Query: 1 RLILYPNGNKKGQGTGHISLYLALDESTYFPNNPWEVFVNFTFFVQDRIKNEYLAIRYDD 60
R++++P GN H+S+YL + +S P W + F+ V ++I N+Y +IR D
Sbjct: 84 RVLIFPKGN----NVDHLSMYLDVADSATLPYG-WSRYAQFSLSVVNQIHNKY-SIRKDT 137
Query: 61 GAVIRLHSMKRECGIDKLIPLQAFKEPSNGYLVDDSCVFGAEIFVIK 107
+ ++ + + G +PL +P GYLV+D+C+ AE+ V K
Sbjct: 138 QH--QFNARESDWGFTSFMPLSDLYDPGRGYLVNDTCIIEAEVAVRK 182
>gi|296089314|emb|CBI39086.3| unnamed protein product [Vitis vinifera]
Length = 1116
Score = 58.5 bits (140), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 33/107 (30%), Positives = 58/107 (54%), Gaps = 8/107 (7%)
Query: 1 RLILYPNGNKKGQGTGHISLYLALDESTYFPNNPWEVFVNFTFFVQDRIKNEYLAIRYDD 60
R++++P GN H+S+YL + +S P W + F+ V ++I N+Y +IR D
Sbjct: 84 RVLIFPKGN----NVDHLSMYLDVADSATLPYG-WSRYAQFSLSVVNQIHNKY-SIRKDT 137
Query: 61 GAVIRLHSMKRECGIDKLIPLQAFKEPSNGYLVDDSCVFGAEIFVIK 107
+ ++ + + G +PL +P GYLV+D+C+ AE+ V K
Sbjct: 138 QH--QFNARESDWGFTSFMPLSDLYDPGRGYLVNDTCIIEAEVAVRK 182
>gi|18408265|ref|NP_564849.1| meprin and TRAF homology domain-containing protein [Arabidopsis
thaliana]
gi|15810006|gb|AAL06930.1| At1g65370/T8F5_15 [Arabidopsis thaliana]
gi|22135763|gb|AAM91038.1| At1g65370/T8F5_15 [Arabidopsis thaliana]
gi|332196245|gb|AEE34366.1| meprin and TRAF homology domain-containing protein [Arabidopsis
thaliana]
Length = 227
Score = 57.8 bits (138), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 40/124 (32%), Positives = 62/124 (50%), Gaps = 12/124 (9%)
Query: 34 PWEVFVNFTFFVQDRIKNEYLAIRYDDGAVIRLHSMKRECGIDKLIPLQAFKEPSNGYLV 93
P +VF +FFV ++ N+YL+I+ D V R S K G+ K + L+ F +P+ G++V
Sbjct: 12 PIDVFDYLSFFVFNKKDNKYLSIQ--DVEVKRFSSSKTVWGLPKAMSLETFTDPAKGFIV 69
Query: 94 D-DSCVFGAEIFVIK-PTGKGEALSIVKVPAQAGNILRWKIPNFSDLRDPEYYSSEFNAG 151
+ + C FGA + + P E L K W I +FS L+ + S F G
Sbjct: 70 EGEPCEFGAHVKIASSPVPVDENLPFHK--------FSWSIRDFSVLKQNDCISKTFAMG 121
Query: 152 GREW 155
G+ W
Sbjct: 122 GKNW 125
>gi|449501168|ref|XP_004161296.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 12-like [Cucumis
sativus]
Length = 466
Score = 57.8 bits (138), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 32/107 (29%), Positives = 58/107 (54%), Gaps = 8/107 (7%)
Query: 1 RLILYPNGNKKGQGTGHISLYLALDESTYFPNNPWEVFVNFTFFVQDRIKNEYLAIRYDD 60
R++++P GN H+S+YL + +S P W + F+ V +++ +Y +IR D
Sbjct: 81 RILVFPKGN----NVDHLSMYLDVADSGTLPYG-WSRYAQFSLAVVNQVHKKY-SIRKDT 134
Query: 61 GAVIRLHSMKRECGIDKLIPLQAFKEPSNGYLVDDSCVFGAEIFVIK 107
+ ++ + + G +PL +PS GYLV+D+C+ AE+ V K
Sbjct: 135 KH--QFNARESDWGFTSFMPLSDLYDPSRGYLVNDTCIVEAEVLVRK 179
>gi|255566265|ref|XP_002524120.1| Ubiquitin carboxyl-terminal hydrolase, putative [Ricinus communis]
gi|223536688|gb|EEF38330.1| Ubiquitin carboxyl-terminal hydrolase, putative [Ricinus communis]
Length = 1120
Score = 57.8 bits (138), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 33/107 (30%), Positives = 59/107 (55%), Gaps = 8/107 (7%)
Query: 1 RLILYPNGNKKGQGTGHISLYLALDESTYFPNNPWEVFVNFTFFVQDRIKNEYLAIRYDD 60
R++++P GN H+S+YL + +S+ P W + F+ V ++I N+Y +IR D
Sbjct: 82 RILIFPKGN----NVDHLSMYLDVSDSSTLPYG-WSRYAQFSLAVVNQIHNKY-SIRKDT 135
Query: 61 GAVIRLHSMKRECGIDKLIPLQAFKEPSNGYLVDDSCVFGAEIFVIK 107
+ ++ + + G +PL +PS GYLV+D+ + AE+ V K
Sbjct: 136 QH--QFNARESDWGFTSFMPLSDLYDPSRGYLVNDTVIVEAEVAVRK 180
>gi|449437528|ref|XP_004136544.1| PREDICTED: LOW QUALITY PROTEIN: ubiquitin carboxyl-terminal
hydrolase 12-like [Cucumis sativus]
Length = 1110
Score = 57.4 bits (137), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 32/107 (29%), Positives = 58/107 (54%), Gaps = 8/107 (7%)
Query: 1 RLILYPNGNKKGQGTGHISLYLALDESTYFPNNPWEVFVNFTFFVQDRIKNEYLAIRYDD 60
R++++P GN H+S+YL + +S P W + F+ V +++ +Y +IR D
Sbjct: 81 RILVFPKGN----NVDHLSMYLDVADSGTLPYG-WSRYAQFSLAVVNQVHKKY-SIRKDT 134
Query: 61 GAVIRLHSMKRECGIDKLIPLQAFKEPSNGYLVDDSCVFGAEIFVIK 107
+ ++ + + G +PL +PS GYLV+D+C+ AE+ V K
Sbjct: 135 KH--QFNARESDWGFTSFMPLSDLYDPSRGYLVNDTCIVEAEVLVRK 179
>gi|357494279|ref|XP_003617428.1| Ubiquitin carboxyl-terminal hydrolase family protein [Medicago
truncatula]
gi|355518763|gb|AET00387.1| Ubiquitin carboxyl-terminal hydrolase family protein [Medicago
truncatula]
Length = 793
Score = 56.6 bits (135), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 32/103 (31%), Positives = 56/103 (54%), Gaps = 7/103 (6%)
Query: 1 RLILYPNGNKKGQGTGHISLYLALDESTYFPNNPWEVFVNFTFFVQDRIKNEYLAIRYDD 60
R++L+P GN + H+S+YL + +S PN W + F+ V ++I N+Y ++R D
Sbjct: 65 RVLLFPKGN---NVSDHLSMYLDVQDSANLPNG-WSSYAQFSLTVVNQINNKY-SVRRDT 119
Query: 61 GAVIRLHSMKRECGIDKLIPLQAFKEPSNGYLVDDSCVFGAEI 103
+ + +R+ G LI L +P GYL++D+ V E+
Sbjct: 120 QH--QFNEQERDWGFTSLIRLGKLHDPRRGYLMNDTLVVEVEV 160
>gi|351724871|ref|NP_001238608.1| ubiquitin specific protease 12 [Glycine max]
gi|255317079|gb|ACU01857.1| ubiquitin specific protease 12 [Glycine max]
gi|255317096|gb|ACU01870.1| ubiquitin specific protease 12 [Glycine max]
Length = 1116
Score = 56.2 bits (134), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 33/107 (30%), Positives = 60/107 (56%), Gaps = 8/107 (7%)
Query: 1 RLILYPNGNKKGQGTGHISLYLALDESTYFPNNPWEVFVNFTFFVQDRIKNEYLAIRYDD 60
R++++P GN G H+S+Y+ + +S P W + +F V ++I ++Y +IR D
Sbjct: 86 RILIFPKGN----GGDHLSMYVDVADSATLPYG-WSRYAHFNLTVVNQIHSKY-SIRKDS 139
Query: 61 GAVIRLHSMKRECGIDKLIPLQAFKEPSNGYLVDDSCVFGAEIFVIK 107
+ ++ + + G +PL +P+ GYLV+D+CV A+I V K
Sbjct: 140 QH--QFNARESDWGFINFMPLAELYDPARGYLVNDTCVVEADISVRK 184
>gi|357140667|ref|XP_003571885.1| PREDICTED: uncharacterized protein LOC100829307 [Brachypodium
distachyon]
Length = 361
Score = 55.8 bits (133), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 44/160 (27%), Positives = 67/160 (41%), Gaps = 14/160 (8%)
Query: 2 LILYPNGNKKGQGTGHISLYLALDESTYFPNNPWEVFVNFTFFVQDRIKNEYLAIRYDDG 61
L L P K G ++SL L L + + E F + Q K++ +R++
Sbjct: 105 LKLNPRDRKSGDKNEYVSLKLELARACVRSSTVVEASFKFLIYDQAYGKHQEHLVRHN-- 162
Query: 62 AVIRLHSMKRECGIDKLIPLQAFKEPSNGYLVDDSCVFGAEIFVIKPTGKGEALSIVKVP 121
+ G +IPL + S+G+L+ DSCVFG E F+ T K S
Sbjct: 163 ----FQTASTSSGTSCMIPLTTLNKHSSGFLMGDSCVFGVE-FIKVATTKANDTSETLFV 217
Query: 122 AQAGN------ILRWKIPNFSDLRDPEYYSSEFNAGGREW 155
+A N + W I +F L+ + S EF GG +W
Sbjct: 218 QKANNTFSDPEVYTWNIEDFFALKSMD-NSPEFEIGGHKW 256
Score = 39.3 bits (90), Expect = 0.55, Method: Compositional matrix adjust.
Identities = 27/105 (25%), Positives = 46/105 (43%), Gaps = 7/105 (6%)
Query: 2 LILYPNGNKKGQGTGHISLYLALDESTYFPNNPWEVFVNFTFFVQDRIKNEYLAIRYDDG 61
+I+YP+G ++SLYL N + V + V+D+ ++ +
Sbjct: 258 IIIYPSG--AANNGNYLSLYLEAKMLDTLHQNSANL-VELSICVKDQETGKHRKLT---- 310
Query: 62 AVIRLHSMKRECGIDKLIPLQAFKEPSNGYLVDDSCVFGAEIFVI 106
+ + G DK I L+ FK+ SNGYLV C E+ ++
Sbjct: 311 GRCQFSKKSTKWGWDKFISLENFKDSSNGYLVKTKCCIEVEVAIV 355
>gi|28436575|gb|AAO43353.1| unknown [Arabidopsis thaliana]
Length = 176
Score = 55.1 bits (131), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 38/115 (33%), Positives = 57/115 (49%), Gaps = 12/115 (10%)
Query: 43 FFVQDRIKNEYLAIRYDDGAVIRLHSMKRECGIDKLIPLQAFKEPSNGYLVD-DSCVFGA 101
FFV ++ N+YL+IR D V R S K G+ K + L+ F +P+ G++V+ + C FGA
Sbjct: 1 FFVFNKKNNKYLSIR--DVEVKRFSSSKTVWGLPKAMSLETFTDPAKGFIVEGEPCEFGA 58
Query: 102 EIFVIK-PTGKGEALSIVKVPAQAGNILRWKIPNFSDLRDPEYYSSEFNAGGREW 155
+ + P E L K W I +FS L+ + S F GG+ W
Sbjct: 59 HVKIASSPVPVDENLPFHK--------FSWSIRDFSVLKQNDCISKTFAMGGKNW 105
>gi|357146642|ref|XP_003574063.1| PREDICTED: uncharacterized protein LOC100841349 [Brachypodium
distachyon]
Length = 324
Score = 55.1 bits (131), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 45/162 (27%), Positives = 73/162 (45%), Gaps = 20/162 (12%)
Query: 2 LILYPNGNKKGQGTGHISLYLALDESTYFPNNPWEVFVNFTFFVQDRIKNEYLAIRYDDG 61
L L P G ++SL L L ++ + E +F F + D+ ++ +++
Sbjct: 68 LKLNPRDRNNGGMKEYVSLMLELSRTSVRSDAVIEA--SFRFLIYDQSYGKH----HENQ 121
Query: 62 AVIRLHSMKRECGIDKLIPLQAFKEPSNGYLVDDSCVFGAEIFVI---KPTGKGEALSIV 118
+ G ++PL+ K+ S+G+LV+DSCVFG E + K K E L I
Sbjct: 122 VSHSFQTASTSSGTSCIVPLRTMKKRSSGFLVNDSCVFGVEFIKVVSAKVNFKSETLFIQ 181
Query: 119 KV------PAQAGNILRWKIPNFSDLRDPEYYSSEFNAGGRE 154
K+ PA + W I +F L++P YS F GG +
Sbjct: 182 KMNNIFSDPA----VYTWDIEDFFTLKNPS-YSPAFEIGGHK 218
Score = 38.5 bits (88), Expect = 0.86, Method: Compositional matrix adjust.
Identities = 30/105 (28%), Positives = 47/105 (44%), Gaps = 11/105 (10%)
Query: 4 LYPNGNKKGQGTGHISLYLALDESTYFPNNPWE-VFVNFTFFVQDRIKNEYLAIRYDDGA 62
+YP+G G+ ++ LYL + N + V VN + Q+ K+ L R
Sbjct: 223 IYPSGLDNGRN--YLCLYLKITRMDMLDQNSADLVEVNLSIKDQETGKHRKLTGRCQ--- 277
Query: 63 VIRLHSMKREC-GIDKLIPLQAFKEPSNGYLVDDSCVFGAEIFVI 106
S K C G K + L+ FK+ S GYLV C A++ ++
Sbjct: 278 ----FSKKSTCWGWSKFMSLEDFKDTSKGYLVKTKCCIEAQVAIV 318
>gi|225436095|ref|XP_002277700.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 12 [Vitis
vinifera]
gi|296084015|emb|CBI24403.3| unnamed protein product [Vitis vinifera]
Length = 1116
Score = 55.1 bits (131), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 30/105 (28%), Positives = 56/105 (53%), Gaps = 8/105 (7%)
Query: 1 RLILYPNGNKKGQGTGHISLYLALDESTYFPNNPWEVFVNFTFFVQDRIKNEYLAIRYDD 60
R++++P GN H+S+YL + +S+ P W + F+ V ++I N+Y +R D
Sbjct: 83 RVLIFPKGN----NVEHLSMYLDVADSSSLPYG-WSRYAQFSLAVVNQIHNKY-TVRKDT 136
Query: 61 GAVIRLHSMKRECGIDKLIPLQAFKEPSNGYLVDDSCVFGAEIFV 105
+ ++ + + G +PL +P G+LV D+C+ AE+ V
Sbjct: 137 QH--QFNARESDWGFTSFMPLSELYDPGRGFLVSDTCIVEAEVAV 179
>gi|224113365|ref|XP_002316470.1| predicted protein [Populus trichocarpa]
gi|222865510|gb|EEF02641.1| predicted protein [Populus trichocarpa]
Length = 1116
Score = 54.7 bits (130), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 31/105 (29%), Positives = 57/105 (54%), Gaps = 8/105 (7%)
Query: 1 RLILYPNGNKKGQGTGHISLYLALDESTYFPNNPWEVFVNFTFFVQDRIKNEYLAIRYDD 60
R++++P GN H+S+YL + +ST P W + F+ V +++ +Y +IR D
Sbjct: 83 RILVFPKGN----NVDHLSMYLDVADSTNLPYG-WSRYAQFSLTVINQLHQKY-SIRKDT 136
Query: 61 GAVIRLHSMKRECGIDKLIPLQAFKEPSNGYLVDDSCVFGAEIFV 105
+ ++ + + G +PL +P GYLV+DSC+ A++ V
Sbjct: 137 QH--QFNARESDWGFTSFMPLGELYDPGRGYLVNDSCIVEADVAV 179
>gi|449448842|ref|XP_004142174.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 13-like [Cucumis
sativus]
gi|449503435|ref|XP_004162001.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 13-like [Cucumis
sativus]
Length = 1118
Score = 54.7 bits (130), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 30/105 (28%), Positives = 57/105 (54%), Gaps = 8/105 (7%)
Query: 1 RLILYPNGNKKGQGTGHISLYLALDESTYFPNNPWEVFVNFTFFVQDRIKNEYLAIRYDD 60
R++++P GN H+S+YL + +S P W + F+ V ++I N+Y ++R D
Sbjct: 85 RILIFPKGN----NVDHLSMYLDVADSASLPYG-WSRYAQFSLGVINQIHNKY-SVRKDT 138
Query: 61 GAVIRLHSMKRECGIDKLIPLQAFKEPSNGYLVDDSCVFGAEIFV 105
+ ++ + + G +PL +P+ GYLV+D+ + AE+ V
Sbjct: 139 QH--QFNARESDWGFTSFMPLSELYDPTRGYLVNDTLIVEAEVLV 181
>gi|255546751|ref|XP_002514434.1| Ubiquitin carboxyl-terminal hydrolase, putative [Ricinus communis]
gi|223546430|gb|EEF47930.1| Ubiquitin carboxyl-terminal hydrolase, putative [Ricinus communis]
Length = 1109
Score = 54.3 bits (129), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 31/105 (29%), Positives = 56/105 (53%), Gaps = 8/105 (7%)
Query: 1 RLILYPNGNKKGQGTGHISLYLALDESTYFPNNPWEVFVNFTFFVQDRIKNEYLAIRYDD 60
R++++P GN H+S+YL + +S P W + F+ V ++I +Y +IR D
Sbjct: 83 RILIFPKGN----NVDHLSMYLDVADSATLPYG-WSRYAQFSLCVVNQIHQKY-SIRKDT 136
Query: 61 GAVIRLHSMKRECGIDKLIPLQAFKEPSNGYLVDDSCVFGAEIFV 105
+ ++ + + G +PL +P GYLV+D+CV A++ V
Sbjct: 137 QH--QFNARESDWGFTSFMPLGELYDPGRGYLVNDTCVVEADVAV 179
>gi|359487017|ref|XP_002263912.2| PREDICTED: ubiquitin carboxyl-terminal hydrolase 12-like [Vitis
vinifera]
gi|296084432|emb|CBI24991.3| unnamed protein product [Vitis vinifera]
Length = 1115
Score = 54.3 bits (129), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 30/105 (28%), Positives = 57/105 (54%), Gaps = 8/105 (7%)
Query: 1 RLILYPNGNKKGQGTGHISLYLALDESTYFPNNPWEVFVNFTFFVQDRIKNEYLAIRYDD 60
R++++P GN H+S+YL + +S P W + F+ V ++I N++ IR D
Sbjct: 82 RVLIFPKGN----NVDHLSMYLDVADSATLPYG-WSRYAQFSLAVINQIHNKF-TIRKDT 135
Query: 61 GAVIRLHSMKRECGIDKLIPLQAFKEPSNGYLVDDSCVFGAEIFV 105
+ ++ + + G +PL +P+ GYLV+D+C+ A++ V
Sbjct: 136 QH--QFNARESDWGFTSFMPLGELYDPARGYLVNDTCIVEADVAV 178
>gi|356509910|ref|XP_003523685.1| PREDICTED: uncharacterized protein LOC100780104 [Glycine max]
Length = 1622
Score = 54.3 bits (129), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 43/170 (25%), Positives = 76/170 (44%), Gaps = 27/170 (15%)
Query: 1 RLILYPNGNKKGQGTGHISLYLALDESTYFPNNPWEVFVNFTFFVQDRIKNEYLAIRYDD 60
RLI+YP G + Q H+S++L + +S ++ W FV+ V ++ R +D
Sbjct: 438 RLIVYPRG--QSQPPCHLSVFLEVTDSRNTSSD-WSCFVSHRLSVVNQ--------RMED 486
Query: 61 GAVI-----RLHSMKRECGIDKLIPLQAFKEPSNGYLVDDSCVFGAEIFVIKPTG----- 110
+V R ++ G + + L + + +G+LV D+ +F AE+ ++K T
Sbjct: 487 KSVTKESQNRYSKAAKDWGWREFVTLTSLFDQDSGFLVQDTVIFSAEVLILKETSIMQDI 546
Query: 111 --KGEALSIVKVPAQAGNILRWKIPNFSDLRD----PEYYSSEFNAGGRE 154
LS P + WK+ NF ++ + +S F AGG E
Sbjct: 547 TENDSELSSSGSPVDKRSSFTWKVENFLSFKEIMETRKIFSKFFQAGGCE 596
Score = 37.7 bits (86), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 27/110 (24%), Positives = 53/110 (48%), Gaps = 5/110 (4%)
Query: 1 RLILYPNGNKKGQGTGHISLYLALDESTYFPNNPWEVFVNFTFFVQDRIKNEYLAIRYDD 60
RL++YP G+ + G+IS+YL + + ++ W+ F ++ + + + ++ I D
Sbjct: 90 RLLIYPKGDSQAL-PGYISIYLQIMDPRGTSSSKWDCFASYRLAIVN-LADDSKTIHRDS 147
Query: 61 GAVIRLHSMKRECGIDKLIPLQAFKEPSNGYLVD-DSCVFGAEIFVIKPT 109
R S K+ G P +P GYL + DS + A+I ++ +
Sbjct: 148 WH--RFSSKKKSHGWCDFTPSNTVFDPKLGYLFNTDSVLITADILILNES 195
>gi|224097508|ref|XP_002310965.1| predicted protein [Populus trichocarpa]
gi|222850785|gb|EEE88332.1| predicted protein [Populus trichocarpa]
Length = 1131
Score = 53.9 bits (128), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 31/107 (28%), Positives = 57/107 (53%), Gaps = 8/107 (7%)
Query: 1 RLILYPNGNKKGQGTGHISLYLALDESTYFPNNPWEVFVNFTFFVQDRIKNEYLAIRYDD 60
R++++P GN H+S+YL + +S P W + F+ V +++ +Y +IR D
Sbjct: 83 RILIFPKGN----NVDHLSMYLDVADSATLPYG-WSRYAQFSLTVINQLHQKY-SIRKDT 136
Query: 61 GAVIRLHSMKRECGIDKLIPLQAFKEPSNGYLVDDSCVFGAEIFVIK 107
+ ++ + + G +PL +P GYLV+D+CV A++ V K
Sbjct: 137 QH--QFNARESDWGFTSFMPLGELYDPGRGYLVNDTCVVEADVAVRK 181
>gi|164605535|dbj|BAF98601.1| CM0545.290.nc [Lotus japonicus]
Length = 1118
Score = 53.9 bits (128), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 31/105 (29%), Positives = 58/105 (55%), Gaps = 8/105 (7%)
Query: 1 RLILYPNGNKKGQGTGHISLYLALDESTYFPNNPWEVFVNFTFFVQDRIKNEYLAIRYDD 60
R++++P GN ++S+YL + +ST P W + F+ V ++I+N+Y +R D
Sbjct: 85 RVLIFPKGN----NVDYLSMYLDVADSTNLPYG-WSRYAQFSLAVVNQIQNKY-TVRKDT 138
Query: 61 GAVIRLHSMKRECGIDKLIPLQAFKEPSNGYLVDDSCVFGAEIFV 105
+ ++ + + G +PL +PS GYL++D+ V AE+ V
Sbjct: 139 QH--QFNARESDWGFTSFMPLGELYDPSRGYLLNDTLVVEAEVLV 181
>gi|28436577|gb|AAO43354.1| unknown [Arabidopsis thaliana]
Length = 176
Score = 53.5 bits (127), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 37/115 (32%), Positives = 57/115 (49%), Gaps = 12/115 (10%)
Query: 43 FFVQDRIKNEYLAIRYDDGAVIRLHSMKRECGIDKLIPLQAFKEPSNGYLVD-DSCVFGA 101
FFV ++ N+YL+I+ D V R S K G+ K + L+ F +P+ G++V+ + C FGA
Sbjct: 1 FFVFNKKNNKYLSIQ--DVEVKRFSSSKTVWGLPKAMSLETFTDPAKGFIVEGEPCEFGA 58
Query: 102 EIFVIK-PTGKGEALSIVKVPAQAGNILRWKIPNFSDLRDPEYYSSEFNAGGREW 155
+ + P E L K W I +FS L+ + S F GG+ W
Sbjct: 59 HVKIASSPVPVDENLPFHK--------FSWSIRDFSVLKQNDCISKTFAMGGKNW 105
>gi|358348573|ref|XP_003638319.1| Ubiquitin carboxyl-terminal hydrolase family protein [Medicago
truncatula]
gi|355504254|gb|AES85457.1| Ubiquitin carboxyl-terminal hydrolase family protein [Medicago
truncatula]
Length = 368
Score = 53.5 bits (127), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 30/107 (28%), Positives = 58/107 (54%), Gaps = 8/107 (7%)
Query: 1 RLILYPNGNKKGQGTGHISLYLALDESTYFPNNPWEVFVNFTFFVQDRIKNEYLAIRYDD 60
R++++P GN ++S+YL + +ST P W + F+ + ++I N++ +R D
Sbjct: 75 RVLIFPKGN----NVDYLSMYLDVADSTSLPYG-WSRYAQFSLAIVNQIHNKF-TVRKDT 128
Query: 61 GAVIRLHSMKRECGIDKLIPLQAFKEPSNGYLVDDSCVFGAEIFVIK 107
+ ++ + + G +PL +PS GYLV+D+ + AE+ V K
Sbjct: 129 QH--QFNARESDWGFTSFMPLGELYDPSRGYLVNDTLIIEAEVLVRK 173
>gi|28436571|gb|AAO43351.1| unknown [Arabidopsis thaliana]
Length = 176
Score = 53.5 bits (127), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 37/115 (32%), Positives = 57/115 (49%), Gaps = 12/115 (10%)
Query: 43 FFVQDRIKNEYLAIRYDDGAVIRLHSMKRECGIDKLIPLQAFKEPSNGYLVD-DSCVFGA 101
FFV ++ N+YL+I+ D V R S K G+ K + L+ F +P+ G++V+ + C FGA
Sbjct: 1 FFVFNKKDNKYLSIQ--DVEVKRFSSSKTVWGLPKAMSLETFTDPAKGFIVEGEPCEFGA 58
Query: 102 EIFVIK-PTGKGEALSIVKVPAQAGNILRWKIPNFSDLRDPEYYSSEFNAGGREW 155
+ + P E L K W I +FS L+ + S F GG+ W
Sbjct: 59 HVKIASSPVPVDENLPFHK--------FSWSIRDFSVLKQNDCISKTFAMGGKNW 105
>gi|28436567|gb|AAO43350.1| unknown [Arabidopsis thaliana]
gi|28436573|gb|AAO43352.1| unknown [Arabidopsis thaliana]
Length = 176
Score = 53.1 bits (126), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 37/115 (32%), Positives = 57/115 (49%), Gaps = 12/115 (10%)
Query: 43 FFVQDRIKNEYLAIRYDDGAVIRLHSMKRECGIDKLIPLQAFKEPSNGYLVD-DSCVFGA 101
FFV ++ N+YL+I+ D V R S K G+ K + L+ F +P+ G++V+ + C FGA
Sbjct: 1 FFVFNKKDNKYLSIQ--DVEVKRFSSSKTVWGLPKAMSLETFTDPAKGFIVEGEPCEFGA 58
Query: 102 EIFVIK-PTGKGEALSIVKVPAQAGNILRWKIPNFSDLRDPEYYSSEFNAGGREW 155
+ + P E L K W I +FS L+ + S F GG+ W
Sbjct: 59 HVKIASSPVPVDENLPFHK--------FSWSIRDFSVLKQNDCISKTFAMGGKNW 105
>gi|297808829|ref|XP_002872298.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297318135|gb|EFH48557.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
Length = 212
Score = 53.1 bits (126), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 42/143 (29%), Positives = 71/143 (49%), Gaps = 17/143 (11%)
Query: 16 GHISLYLALDESTYFPNNPW-EVFVNFTFFVQDRIKNEYLAIRYDDGAVIRLHSMKRECG 74
G +S+Y+ ST P +VF + TFFV + +YL+I+ D V R +S K G
Sbjct: 4 GFVSMYVECLSST----TPLIDVFAHLTFFVFSEEEKKYLSIQ--DVEVKRFNSAKTVWG 57
Query: 75 IDKLIPLQAFKEPSNGYLV-DDSCVFGAEIFVI-KPTGKGEALSIVKVPAQAGNILRWKI 132
+ K + ++ K+ + G+++ + FGA + ++ +P GE L K W I
Sbjct: 58 LSKALSVETLKDRAKGFILYGELHEFGAHVKIVSRPVSFGEDLPFHK--------FSWTI 109
Query: 133 PNFSDLRDPEYYSSEFNAGGREW 155
+FS LR + S F+ G ++W
Sbjct: 110 CDFSLLRQNDCVSKTFHMGEKDW 132
>gi|28436565|gb|AAO43349.1| unknown [Arabidopsis thaliana]
Length = 176
Score = 53.1 bits (126), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 37/115 (32%), Positives = 57/115 (49%), Gaps = 12/115 (10%)
Query: 43 FFVQDRIKNEYLAIRYDDGAVIRLHSMKRECGIDKLIPLQAFKEPSNGYLVD-DSCVFGA 101
FFV ++ N+YL+I+ D V R S K G+ K + L+ F +P+ G++V+ + C FGA
Sbjct: 1 FFVFNKKDNKYLSIQ--DVEVKRFSSSKTVWGLPKAMSLETFTDPAKGFIVEGEPCEFGA 58
Query: 102 EIFVIK-PTGKGEALSIVKVPAQAGNILRWKIPNFSDLRDPEYYSSEFNAGGREW 155
+ + P E L K W I +FS L+ + S F GG+ W
Sbjct: 59 HVKIASSPVPVDENLPFHK--------FSWSIRDFSVLKQNDCISKTFAMGGKNW 105
>gi|357493435|ref|XP_003617006.1| Ubiquitin carboxyl-terminal hydrolase [Medicago truncatula]
gi|355518341|gb|AES99964.1| Ubiquitin carboxyl-terminal hydrolase [Medicago truncatula]
Length = 1123
Score = 53.1 bits (126), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 30/105 (28%), Positives = 57/105 (54%), Gaps = 8/105 (7%)
Query: 1 RLILYPNGNKKGQGTGHISLYLALDESTYFPNNPWEVFVNFTFFVQDRIKNEYLAIRYDD 60
R++++P GN ++S+YL + +ST P W + F+ V ++I N+Y +R D
Sbjct: 90 RVLIFPKGN----NVDYLSMYLDVADSTSLPYG-WSRYAQFSLAVVNQIHNKY-TVRKDT 143
Query: 61 GAVIRLHSMKRECGIDKLIPLQAFKEPSNGYLVDDSCVFGAEIFV 105
+ ++ + + G +PL +PS GYL++D+ + AE+ V
Sbjct: 144 QH--QFNARESDWGFTSFMPLGELYDPSRGYLMNDTLIIEAEVLV 186
>gi|356501302|ref|XP_003519464.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 12-like [Glycine
max]
Length = 1118
Score = 53.1 bits (126), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 31/105 (29%), Positives = 57/105 (54%), Gaps = 8/105 (7%)
Query: 1 RLILYPNGNKKGQGTGHISLYLALDESTYFPNNPWEVFVNFTFFVQDRIKNEYLAIRYDD 60
R++++P GN ++S+YL + +S P W + F+ V ++I N+Y ++R D
Sbjct: 86 RVLIFPKGN----NVDYLSMYLDVADSASLPYG-WSRYAQFSLAVVNQIHNKY-SVRKDT 139
Query: 61 GAVIRLHSMKRECGIDKLIPLQAFKEPSNGYLVDDSCVFGAEIFV 105
+ ++ + + G +PL +PS GYLV+D+ V AE+ V
Sbjct: 140 QH--QFNARESDWGFTSFMPLGELYDPSRGYLVNDTLVVEAEVLV 182
>gi|357462153|ref|XP_003601358.1| Ubiquitin carboxyl-terminal hydrolase family protein [Medicago
truncatula]
gi|355490406|gb|AES71609.1| Ubiquitin carboxyl-terminal hydrolase family protein [Medicago
truncatula]
Length = 1146
Score = 52.8 bits (125), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 30/107 (28%), Positives = 58/107 (54%), Gaps = 8/107 (7%)
Query: 1 RLILYPNGNKKGQGTGHISLYLALDESTYFPNNPWEVFVNFTFFVQDRIKNEYLAIRYDD 60
R++++P GN ++S+YL + +ST P W + F+ + ++I N++ +R D
Sbjct: 85 RVLIFPKGN----NVDYLSMYLDVADSTSLPYG-WSRYAQFSLAIVNQIHNKF-TVRKDT 138
Query: 61 GAVIRLHSMKRECGIDKLIPLQAFKEPSNGYLVDDSCVFGAEIFVIK 107
+ ++ + + G +PL +PS GYLV+D+ + AE+ V K
Sbjct: 139 QH--QFNARESDWGFTSFMPLGELYDPSRGYLVNDTLIIEAEVLVRK 183
>gi|326489641|dbj|BAK01801.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 1119
Score = 52.8 bits (125), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 32/107 (29%), Positives = 55/107 (51%), Gaps = 8/107 (7%)
Query: 1 RLILYPNGNKKGQGTGHISLYLALDESTYFPNNPWEVFVNFTFFVQDRIKNEYLAIRYDD 60
R++++P GN +S+YL + +S P W + F+ V ++I N++ IR +
Sbjct: 88 RVLIFPRGN----NVEFLSMYLDVADSAVLPYG-WTRYAQFSLSVVNQIHNKF-TIRKET 141
Query: 61 GAVIRLHSMKRECGIDKLIPLQAFKEPSNGYLVDDSCVFGAEIFVIK 107
+ + + + G +PL PS GYLV+D+CV AE+ V K
Sbjct: 142 QH--QFSARESDWGFTSFMPLSELYNPSRGYLVNDTCVIEAEVAVCK 186
>gi|110741949|dbj|BAE98915.1| ubiquitin carboxyl-terminal hydrolase like protein [Arabidopsis
thaliana]
Length = 545
Score = 52.4 bits (124), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 30/107 (28%), Positives = 57/107 (53%), Gaps = 8/107 (7%)
Query: 1 RLILYPNGNKKGQGTGHISLYLALDESTYFPNNPWEVFVNFTFFVQDRIKNEYLAIRYDD 60
R++++P GN H+S+YL + ++ P W + F+ V +++ N Y +IR +
Sbjct: 84 RILIFPKGN----NVDHLSMYLDVADAANLPYG-WSRYSQFSLAVVNQVNNRY-SIRKET 137
Query: 61 GAVIRLHSMKRECGIDKLIPLQAFKEPSNGYLVDDSCVFGAEIFVIK 107
+ ++ + + G +PL EP+ GYLV+D+ + AE+ V K
Sbjct: 138 QH--QFNARESDWGFTSFMPLSELYEPTRGYLVNDTVLIEAEVAVRK 182
>gi|6671947|gb|AAF23207.1|AC016795_20 putative ubiquitin carboxyl-terminal hydrolase [Arabidopsis
thaliana]
Length = 1124
Score = 52.4 bits (124), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 30/107 (28%), Positives = 57/107 (53%), Gaps = 8/107 (7%)
Query: 1 RLILYPNGNKKGQGTGHISLYLALDESTYFPNNPWEVFVNFTFFVQDRIKNEYLAIRYDD 60
R++++P GN H+S+YL + ++ P W + F+ V +++ N Y +IR +
Sbjct: 93 RILIFPKGN----NVDHLSMYLDVADAANLPYG-WSRYSQFSLAVVNQVNNRY-SIRKET 146
Query: 61 GAVIRLHSMKRECGIDKLIPLQAFKEPSNGYLVDDSCVFGAEIFVIK 107
+ ++ + + G +PL EP+ GYLV+D+ + AE+ V K
Sbjct: 147 QH--QFNARESDWGFTSFMPLSELYEPTRGYLVNDTVLIEAEVAVRK 191
>gi|334185267|ref|NP_001189864.1| ubiquitin carboxyl-terminal hydrolase 13 [Arabidopsis thaliana]
gi|332641596|gb|AEE75117.1| ubiquitin carboxyl-terminal hydrolase 13 [Arabidopsis thaliana]
Length = 1114
Score = 52.4 bits (124), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 30/107 (28%), Positives = 57/107 (53%), Gaps = 8/107 (7%)
Query: 1 RLILYPNGNKKGQGTGHISLYLALDESTYFPNNPWEVFVNFTFFVQDRIKNEYLAIRYDD 60
R++++P GN H+S+YL + ++ P W + F+ V +++ N Y +IR +
Sbjct: 83 RILIFPKGN----NVDHLSMYLDVADAANLPYG-WSRYSQFSLAVVNQVNNRY-SIRKET 136
Query: 61 GAVIRLHSMKRECGIDKLIPLQAFKEPSNGYLVDDSCVFGAEIFVIK 107
+ ++ + + G +PL EP+ GYLV+D+ + AE+ V K
Sbjct: 137 QH--QFNARESDWGFTSFMPLSELYEPTRGYLVNDTVLIEAEVAVRK 181
>gi|30681938|ref|NP_187797.3| ubiquitin carboxyl-terminal hydrolase 13 [Arabidopsis thaliana]
gi|75243459|sp|Q84WU2.1|UBP13_ARATH RecName: Full=Ubiquitin carboxyl-terminal hydrolase 13; AltName:
Full=Deubiquitinating enzyme 13; Short=AtUBP13; AltName:
Full=Ubiquitin thioesterase 13; AltName:
Full=Ubiquitin-specific-processing protease 13
gi|27754270|gb|AAO22588.1| putative ubiquitin carboxyl-terminal hydrolase [Arabidopsis
thaliana]
gi|332641595|gb|AEE75116.1| ubiquitin carboxyl-terminal hydrolase 13 [Arabidopsis thaliana]
Length = 1115
Score = 52.0 bits (123), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 30/107 (28%), Positives = 57/107 (53%), Gaps = 8/107 (7%)
Query: 1 RLILYPNGNKKGQGTGHISLYLALDESTYFPNNPWEVFVNFTFFVQDRIKNEYLAIRYDD 60
R++++P GN H+S+YL + ++ P W + F+ V +++ N Y +IR +
Sbjct: 84 RILIFPKGN----NVDHLSMYLDVADAANLPYG-WSRYSQFSLAVVNQVNNRY-SIRKET 137
Query: 61 GAVIRLHSMKRECGIDKLIPLQAFKEPSNGYLVDDSCVFGAEIFVIK 107
+ ++ + + G +PL EP+ GYLV+D+ + AE+ V K
Sbjct: 138 QH--QFNARESDWGFTSFMPLSELYEPTRGYLVNDTVLIEAEVAVRK 182
>gi|293331469|ref|NP_001169028.1| uncharacterized protein LOC100382861 [Zea mays]
gi|223974511|gb|ACN31443.1| unknown [Zea mays]
Length = 245
Score = 52.0 bits (123), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 43/162 (26%), Positives = 73/162 (45%), Gaps = 18/162 (11%)
Query: 2 LILYPNGNKKGQ-GTGHISLYLALDESTYFPNNPWEVFVNFTFFVQDRIKNEYL--AIRY 58
L L P K G GT ++SL L LD+ + P+ V +F + D+ ++L +R+
Sbjct: 33 LKLNPRDKKSGDDGTEYVSLVLQLDDLSVKPDTV--VKASFKLLIYDQAYGKHLEHQVRH 90
Query: 59 DDGAVIRLHSMKRECGIDKLIPLQAFKEPSNGYLVDDSCVFGAEIFVIKP---TGKGEAL 115
+ G ++ L+ KE + ++V++SC FG E +K + E L
Sbjct: 91 ------SFQTASTSSGASCMVSLEKLKERPSKFIVNNSCTFGVEFIRVKASKVSTTSETL 144
Query: 116 SIVKVPA--QAGNILRWKIPNFSDLRDPEYYSSEFNAGGREW 155
V+ P+ W I +F L++ +S EF GG +W
Sbjct: 145 -FVRKPSVFDEARTYTWDIEDFFALKNSG-HSPEFQVGGHKW 184
>gi|10998129|dbj|BAB17021.1| ubiquitin carboxyl-terminal hydrolase-like protein [Arabidopsis
thaliana]
Length = 599
Score = 52.0 bits (123), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 30/107 (28%), Positives = 57/107 (53%), Gaps = 8/107 (7%)
Query: 1 RLILYPNGNKKGQGTGHISLYLALDESTYFPNNPWEVFVNFTFFVQDRIKNEYLAIRYDD 60
R++++P GN H+S+YL + ++ P W + F+ V +++ N Y +IR +
Sbjct: 93 RILIFPKGN----NVDHLSMYLDVADAANLPYG-WSRYSQFSLAVVNQVNNRY-SIRKET 146
Query: 61 GAVIRLHSMKRECGIDKLIPLQAFKEPSNGYLVDDSCVFGAEIFVIK 107
+ ++ + + G +PL EP+ GYLV+D+ + AE+ V K
Sbjct: 147 QH--QFNARESDWGFTSFMPLSELYEPTRGYLVNDTVLIEAEVAVRK 191
>gi|145360308|ref|NP_180104.3| TRAF-like protein [Arabidopsis thaliana]
gi|113208238|dbj|BAF03523.1| CGS1 mRNA stability 1 [Arabidopsis thaliana]
gi|330252594|gb|AEC07688.1| TRAF-like protein [Arabidopsis thaliana]
Length = 1673
Score = 52.0 bits (123), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 43/166 (25%), Positives = 76/166 (45%), Gaps = 19/166 (11%)
Query: 1 RLILYPNGNKKGQGTGHISLYLALDESTYFPNNPWEVFVNFTFFVQDRIKNEYLAIRYDD 60
RLI+YP G + Q H+S++L + +S ++ W FV+ V ++ E +
Sbjct: 442 RLIVYPRG--QSQPPCHLSVFLEVTDSR--SSSDWSCFVSHRLSVVNQRLEEKSVTKESQ 497
Query: 61 GAVIRLHSMKRECGIDKLIPLQAFKEPSNGYLVDDSCVFGAEIFVIKPTGKG----EALS 116
R ++ G + + L + + +G+LV D+ VF AE+ ++K T EA S
Sbjct: 498 N---RYSKAAKDWGWREFVTLTSLFDQDSGFLVQDTVVFSAEVLILKETSATKEYVEADS 554
Query: 117 IVKVPAQAGNILR----WKIPNFSDLRD----PEYYSSEFNAGGRE 154
V ++ + WK+ NF ++ + +S F AGG E
Sbjct: 555 TNSVSPTDNSVKKSSFTWKVENFLAFKEIMETRKIFSKFFQAGGCE 600
Score = 39.7 bits (91), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 37/154 (24%), Positives = 70/154 (45%), Gaps = 18/154 (11%)
Query: 1 RLILYPNGNKKGQGTGHISLYLALDESTYFPNNPWEVFVNFTFFVQDRIKNEYLAIRYDD 60
RL++YP G+ + G+IS+YL + + ++ W+ F ++ + + + ++ L I D
Sbjct: 101 RLLVYPRGDSQAL-PGYISIYLQIMDPRGTTSSRWDCFASYRLSIVNLV-DDSLTIHKDS 158
Query: 61 GAVIRLHSMKRECGIDKLIPLQAFKEPSNGYLV-DDSCVFGAEIFVIKPT------GKGE 113
R S K+ G + +P G+L +DS + A+I ++ + E
Sbjct: 159 WH--RFSSKKKSHGWCDFTLNSSILDPKMGFLFNNDSLLITADILILNESVSFSRDNNNE 216
Query: 114 ALSIVKVPAQAGNI-------LRWKIPNFSDLRD 140
S+ K + AG + WK+ NFS +D
Sbjct: 217 GQSLYKENSIAGPMPDVLSGKFTWKVNNFSLFKD 250
>gi|224151726|ref|XP_002337146.1| predicted protein [Populus trichocarpa]
gi|222838356|gb|EEE76721.1| predicted protein [Populus trichocarpa]
Length = 76
Score = 52.0 bits (123), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 20/50 (40%), Positives = 31/50 (62%)
Query: 65 RLHSMKRECGIDKLIPLQAFKEPSNGYLVDDSCVFGAEIFVIKPTGKGEA 114
R H +K ECG D+ I L F + G++++D+CV GAE+FV +G+
Sbjct: 21 RFHGLKLECGFDQFIKLSTFNDARYGFVLEDTCVLGAEVFVCGERSRGKG 70
>gi|168034797|ref|XP_001769898.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162678804|gb|EDQ65258.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 1677
Score = 51.6 bits (122), Expect = 1e-04, Method: Composition-based stats.
Identities = 45/173 (26%), Positives = 77/173 (44%), Gaps = 28/173 (16%)
Query: 1 RLILYPNGNKKGQGTGHISLYLALDESTYFPNNP---WEVFVNFTFFVQDRIKNEYLAIR 57
RLI+YP G + Q H+S++L + + P N W FV+ V ++ +E +
Sbjct: 417 RLIVYPRG--QSQPPCHLSMFLEVTD----PRNTCADWSCFVSHRLSVVNQRTDERSVTK 470
Query: 58 YDDGAVIRLHSMKRECGIDKLIPLQAFKEPSNGYLVDDSCVFGAEIFVIKPTGKGEALSI 117
R ++ G + + L + + +G+LV D VF AE+ ++K T + LS
Sbjct: 471 ESQN---RYSKAAKDWGWREFVTLTSLFDQDSGFLVQDMVVFSAEVLILKETSTMQELSE 527
Query: 118 VKVPAQA-------GNILR-----WKIPNFSDLRD----PEYYSSEFNAGGRE 154
+ A A G I+ W++ NF ++ + +S F AGG E
Sbjct: 528 YEGEAAASGGGSDTGRIVNRGTFTWRVENFLAFKEIMETRKIFSKFFQAGGCE 580
Score = 43.1 bits (100), Expect = 0.038, Method: Composition-based stats.
Identities = 35/150 (23%), Positives = 70/150 (46%), Gaps = 19/150 (12%)
Query: 1 RLILYPNGNKKGQGTGHISLYLALDESTYFPNNPWEVFVNFTFFVQDRIKNEYLAIRYDD 60
RL++YP G+ + G++S+YL + + ++ W+ F ++ V ++ K+E +I+ D
Sbjct: 87 RLLVYPRGDSQAL-PGYLSIYLQVTDPRGSSSSKWDCFASYRLCVVNQ-KDETKSIQRDS 144
Query: 61 GAVIRLHSMKRECGIDKLIPLQAFKEPSNGYLVDDSCVFGAEIFVIKPTGKGEALSIVK- 119
R K+ G P + G++V+++ + AEI V+ E++S +
Sbjct: 145 WH--RFSGKKKSHGWCDFTPSSTVLDGKGGFVVNEAVLITAEILVLH-----ESVSFSRE 197
Query: 120 --VPAQAG-------NILRWKIPNFSDLRD 140
+PA G WK+ N S ++
Sbjct: 198 NELPATGGPAPEVLSGKFTWKVHNLSLFKE 227
>gi|34395211|dbj|BAC83609.1| putative ubiquitin-specific protease [Oryza sativa Japonica Group]
Length = 1116
Score = 51.2 bits (121), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 30/107 (28%), Positives = 56/107 (52%), Gaps = 8/107 (7%)
Query: 1 RLILYPNGNKKGQGTGHISLYLALDESTYFPNNPWEVFVNFTFFVQDRIKNEYLAIRYDD 60
R++++P GN ++S+YL + +S P W + F+ V +++ N++ IR +
Sbjct: 108 RILIFPRGN----NVEYLSMYLDVADSAVLPYG-WTRYAQFSLSVVNQMHNKF-TIRKET 161
Query: 61 GAVIRLHSMKRECGIDKLIPLQAFKEPSNGYLVDDSCVFGAEIFVIK 107
+ + + + G +PL PS GYLV+D+C+ AE+ V K
Sbjct: 162 QH--QFSARESDWGFTSFMPLGDLYNPSRGYLVNDTCIVEAEVAVCK 206
>gi|297810771|ref|XP_002873269.1| ubiquitin-specific protease 12 [Arabidopsis lyrata subsp. lyrata]
gi|297319106|gb|EFH49528.1| ubiquitin-specific protease 12 [Arabidopsis lyrata subsp. lyrata]
Length = 1115
Score = 51.2 bits (121), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 30/107 (28%), Positives = 56/107 (52%), Gaps = 8/107 (7%)
Query: 1 RLILYPNGNKKGQGTGHISLYLALDESTYFPNNPWEVFVNFTFFVQDRIKNEYLAIRYDD 60
R++++P GN H+S+YL + ++ P W + F+ V ++I + Y IR +
Sbjct: 85 RILIFPKGN----NVDHLSMYLDVSDAASLPYG-WSRYAQFSLAVVNQIHSRY-TIRKET 138
Query: 61 GAVIRLHSMKRECGIDKLIPLQAFKEPSNGYLVDDSCVFGAEIFVIK 107
+ ++ + + G +PL +PS GYLV+D+ + AE+ V K
Sbjct: 139 QH--QFNARESDWGFTSFMPLSELYDPSRGYLVNDTVLVEAEVAVRK 183
>gi|414871059|tpg|DAA49616.1| TPA: hypothetical protein ZEAMMB73_771653 [Zea mays]
Length = 300
Score = 51.2 bits (121), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 30/90 (33%), Positives = 42/90 (46%), Gaps = 6/90 (6%)
Query: 71 RECGIDKLIPLQAFKEPSNGYLVDDSCVFGAEIFVIKPTGKGEALSIVKVPAQAG----- 125
R GI +I + KEPS+G++V DSCVFG E+ + + V + G
Sbjct: 105 RSSGISCMILVYTLKEPSSGFIVGDSCVFGVELIKFTTAKVKDGSGTLHVQKRIGFCSAR 164
Query: 126 NILRWKIPNFSDLRDPEYYSSEFNAGGREW 155
W I +F L+ YS EF GG +W
Sbjct: 165 EAYTWIINDFLSLK-GRCYSPEFEIGGHKW 193
>gi|222636481|gb|EEE66613.1| hypothetical protein OsJ_23193 [Oryza sativa Japonica Group]
Length = 1017
Score = 51.2 bits (121), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 30/107 (28%), Positives = 56/107 (52%), Gaps = 8/107 (7%)
Query: 1 RLILYPNGNKKGQGTGHISLYLALDESTYFPNNPWEVFVNFTFFVQDRIKNEYLAIRYDD 60
R++++P GN ++S+YL + +S P W + F+ V +++ N++ IR +
Sbjct: 88 RILIFPRGN----NVEYLSMYLDVADSAVLPYG-WTRYAQFSLSVVNQMHNKF-TIRKET 141
Query: 61 GAVIRLHSMKRECGIDKLIPLQAFKEPSNGYLVDDSCVFGAEIFVIK 107
+ + + + G +PL PS GYLV+D+C+ AE+ V K
Sbjct: 142 QH--QFSARESDWGFTSFMPLGDLYNPSRGYLVNDTCIVEAEVAVCK 186
>gi|255573263|ref|XP_002527560.1| conserved hypothetical protein [Ricinus communis]
gi|223533052|gb|EEF34812.1| conserved hypothetical protein [Ricinus communis]
Length = 474
Score = 51.2 bits (121), Expect = 1e-04, Method: Composition-based stats.
Identities = 31/105 (29%), Positives = 52/105 (49%), Gaps = 8/105 (7%)
Query: 1 RLILYPNGNKKGQGTGHISLYLALDESTYFPNNPWEVFVNFTFFVQDRIKNEYLAIRYDD 60
RL+++P GN H+S+Y+ + +ST PN W F V ++ N +R D
Sbjct: 37 RLLIFPKGNN----VDHLSIYIEVADSTSLPNG-WSRDAAFGLAVINQFNNS-ATVRKDT 90
Query: 61 GAVIRLHSMKRECGIDKLIPLQAFKEPSNGYLVDDSCVFGAEIFV 105
V ++ + + G +PL K+P+ GYLV+D+ E+ V
Sbjct: 91 QHV--FNARESDWGFTSFLPLSKLKDPAVGYLVNDTLTVETEVHV 133
>gi|242034171|ref|XP_002464480.1| hypothetical protein SORBIDRAFT_01g019210 [Sorghum bicolor]
gi|241918334|gb|EER91478.1| hypothetical protein SORBIDRAFT_01g019210 [Sorghum bicolor]
Length = 315
Score = 51.2 bits (121), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 42/165 (25%), Positives = 71/165 (43%), Gaps = 20/165 (12%)
Query: 2 LILYPNGNKKGQGTGHISLYLALDESTYFPNNPWEVFVNFTFFVQDRIKNEYLAIRYDDG 61
L + P K G HI+L L++ +++ ++ + + + K Y +
Sbjct: 54 LQVSPMQKKTGHKIPHIALSLSVYQNSLKADDILSAVFELSMY--NHSKGTYHGCKASYH 111
Query: 62 AVIRLHSMKRECGIDKLIPLQAFKEPSNGYLVDDSCVFGAEIFVIKPTGKGEALSIVKVP 121
I+ +++C LIPL+ + S+ +LVDDSCVFG I + + + + I K P
Sbjct: 112 FDIKNTRSEKQC----LIPLEELLKSSD-FLVDDSCVFGVRILKAHVSSQNKPIVIQKKP 166
Query: 122 AQAGNIL-----------RWKIPNFSDLRDPEYYSSEFNAGGREW 155
+ NI W + NF D+ S F AGG +W
Sbjct: 167 STVQNIFLQKKGFIKGTYTWTMNNFPDIVPVR--SPAFEAGGHKW 209
>gi|357111520|ref|XP_003557560.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 12-like
[Brachypodium distachyon]
Length = 1119
Score = 51.2 bits (121), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 31/107 (28%), Positives = 55/107 (51%), Gaps = 8/107 (7%)
Query: 1 RLILYPNGNKKGQGTGHISLYLALDESTYFPNNPWEVFVNFTFFVQDRIKNEYLAIRYDD 60
R++++P GN +S+YL + +S P W + F+ V ++I N++ IR +
Sbjct: 88 RVLIFPRGN----NVEFLSMYLDVADSAVLPYG-WSRYAQFSLSVVNQIHNKF-TIRKET 141
Query: 61 GAVIRLHSMKRECGIDKLIPLQAFKEPSNGYLVDDSCVFGAEIFVIK 107
+ + + + G +PL PS GYLV+D+C+ AE+ V K
Sbjct: 142 QH--QFSARESDWGFTSFMPLGELYNPSRGYLVNDTCIVEAEVAVCK 186
>gi|209977652|gb|ACJ04334.1| ubiquitin specific protease 12 [Nicotiana tabacum]
Length = 1116
Score = 51.2 bits (121), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 29/105 (27%), Positives = 54/105 (51%), Gaps = 8/105 (7%)
Query: 1 RLILYPNGNKKGQGTGHISLYLALDESTYFPNNPWEVFVNFTFFVQDRIKNEYLAIRYDD 60
R++++P GN H+S+YL + +S P W F+ V +R+ N++ +R D
Sbjct: 83 RILIFPKGN----NVDHLSMYLDVADSPALPYG-WSRHAQFSLAVLNRVHNKF-TVRKDT 136
Query: 61 GAVIRLHSMKRECGIDKLIPLQAFKEPSNGYLVDDSCVFGAEIFV 105
+ ++ + + G +PL +P GYLVDD+ + A++ V
Sbjct: 137 QH--QFNARESDWGFTSFMPLSELYDPIRGYLVDDTVIVEADVAV 179
>gi|218199136|gb|EEC81563.1| hypothetical protein OsI_25004 [Oryza sativa Indica Group]
Length = 1089
Score = 51.2 bits (121), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 30/107 (28%), Positives = 56/107 (52%), Gaps = 8/107 (7%)
Query: 1 RLILYPNGNKKGQGTGHISLYLALDESTYFPNNPWEVFVNFTFFVQDRIKNEYLAIRYDD 60
R++++P GN ++S+YL + +S P W + F+ V +++ N++ IR +
Sbjct: 88 RILIFPRGN----NVEYLSMYLDVADSAVLPYG-WTRYAQFSLSVVNQMHNKF-TIRKET 141
Query: 61 GAVIRLHSMKRECGIDKLIPLQAFKEPSNGYLVDDSCVFGAEIFVIK 107
+ + + + G +PL PS GYLV+D+C+ AE+ V K
Sbjct: 142 QH--QFSARESDWGFTSFMPLGDLYNPSRGYLVNDTCIVEAEVAVCK 186
>gi|414871056|tpg|DAA49613.1| TPA: hypothetical protein ZEAMMB73_174423 [Zea mays]
Length = 306
Score = 51.2 bits (121), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 41/160 (25%), Positives = 69/160 (43%), Gaps = 14/160 (8%)
Query: 2 LILYPNGNKKGQ-GTGHISLYLALDESTYFPNNPWEVFVNFTFFVQDRIKNEYLAIRYDD 60
L L P K G GT ++SL L LD+ + P+ + + Q K+ +R+
Sbjct: 52 LKLNPRDKKSGDDGTEYVSLVLQLDDLSVKPDTVVKASFKLLIYDQAYGKHSEHQVRHS- 110
Query: 61 GAVIRLHSMKRECGIDKLIPLQAFKEPSNGYLVDDSCVFGAEIFVIKP---TGKGEALSI 117
+ G ++ L+ KE + ++V++SC FG E +K + E L
Sbjct: 111 -----FQTASTSSGASCMVSLEKLKERPSKFIVNNSCTFGVEFIKVKASKVSTTSETL-F 164
Query: 118 VKVPA--QAGNILRWKIPNFSDLRDPEYYSSEFNAGGREW 155
V+ P+ W I +F L++ +S EF GG +W
Sbjct: 165 VRKPSVFDEARTYTWDIEDFFALKNSG-HSPEFEVGGHKW 203
>gi|414871058|tpg|DAA49615.1| TPA: hypothetical protein ZEAMMB73_771653 [Zea mays]
Length = 345
Score = 50.8 bits (120), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 30/90 (33%), Positives = 42/90 (46%), Gaps = 6/90 (6%)
Query: 71 RECGIDKLIPLQAFKEPSNGYLVDDSCVFGAEIFVIKPTGKGEALSIVKVPAQAG----- 125
R GI +I + KEPS+G++V DSCVFG E+ + + V + G
Sbjct: 150 RSSGISCMILVYTLKEPSSGFIVGDSCVFGVELIKFTTAKVKDGSGTLHVQKRIGFCSAR 209
Query: 126 NILRWKIPNFSDLRDPEYYSSEFNAGGREW 155
W I +F L+ YS EF GG +W
Sbjct: 210 EAYTWIINDFLSLKG-RCYSPEFEIGGHKW 238
>gi|297814261|ref|XP_002875014.1| hypothetical protein ARALYDRAFT_490488 [Arabidopsis lyrata subsp.
lyrata]
gi|297320851|gb|EFH51273.1| hypothetical protein ARALYDRAFT_490488 [Arabidopsis lyrata subsp.
lyrata]
Length = 298
Score = 50.8 bits (120), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 39/158 (24%), Positives = 72/158 (45%), Gaps = 20/158 (12%)
Query: 2 LILYPNGNKKGQGTGHISLYLALDESTYFPNNPWEVFVNFTFFVQDRIKNEYLAIRYDDG 61
L +YPNG+K +GT H+S++L S V + + FV +++ ++ D+
Sbjct: 54 LSVYPNGHKSAKGT-HVSIFLMNQVSV-------NVLLTYELFVVSQLERKWHTHGRDE- 104
Query: 62 AVIRLHSMKRECGIDKLIPLQAFKE-PSNGYLVDDSCVFGAEIFVIKPT--GKGEALSIV 118
E + + +F + G+L+ D C+FG + + I+P G E S++
Sbjct: 105 -----FDTNPEPATEGFLRFISFADLERKGFLIGDCCMFGVKFYGIEPANPGTAECFSLI 159
Query: 119 KVPAQAGNILRWKIPNFSDLR-DPEYYSSEFNAGGREW 155
+ P + + W + FS + S+EF G R+W
Sbjct: 160 EKPLN--HKVTWMMSKFSSFNPGKAHQSNEFVVGTRKW 195
>gi|357462151|ref|XP_003601357.1| Ubiquitin carboxyl-terminal hydrolase family protein [Medicago
truncatula]
gi|355490405|gb|AES71608.1| Ubiquitin carboxyl-terminal hydrolase family protein [Medicago
truncatula]
Length = 1148
Score = 50.8 bits (120), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 28/107 (26%), Positives = 56/107 (52%), Gaps = 7/107 (6%)
Query: 1 RLILYPNGNKKGQGTGHISLYLALDESTYFPNNPWEVFVNFTFFVQDRIKNEYLAIRYDD 60
R++++P GN ++S+YL + +ST P W + F+ + ++I N++ +
Sbjct: 86 RVLIFPKGN----NVDYLSMYLDVADSTSLPYG-WSRYAQFSLAIVNQIHNKFTVRK--G 138
Query: 61 GAVIRLHSMKRECGIDKLIPLQAFKEPSNGYLVDDSCVFGAEIFVIK 107
+ ++ + + G +PL +PS GYLV+D+ + AE+ V K
Sbjct: 139 NTQHQFNARESDWGFTSFMPLGELYDPSRGYLVNDTLIIEAEVLVRK 185
>gi|2191153|gb|AAB61040.1| contains similarity to blue copper proteins [Arabidopsis thaliana]
Length = 380
Score = 50.8 bits (120), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 41/164 (25%), Positives = 70/164 (42%), Gaps = 29/164 (17%)
Query: 1 RLILYPNGNKKGQGTGHISLYLALDESTYFPNNPWEVFVNFTFFVQDRIKNEYLAIRYDD 60
+L ++PNG+ +GT ++SLYL Y D + E LA+ +
Sbjct: 53 KLSVHPNGHTNAKGTHYVSLYLMNQAPVY-----------------DTLTYELLAVSQLE 95
Query: 61 GAVIRLHSMKR-ECGIDKLIPLQAFKE-------PSNGYLVDDSCVFGAEIFVIKPTGKG 112
+ H+ R E ++ + + F+E NG+L+ D C+FG + I+P G
Sbjct: 96 P---KWHTHGRDEYETNEELGSEGFREFISLVDLKKNGFLIGDCCMFGVKFHGIEPAKPG 152
Query: 113 EALSIVKVPAQAGNILRWKIPNFSDLRDPEYY-SSEFNAGGREW 155
A S + + + W + FS + S+EF G R+W
Sbjct: 153 TAESFSLIEKPLNHRVTWMMTMFSSFNPGNVHQSNEFVVGTRKW 196
>gi|297833980|ref|XP_002884872.1| hypothetical protein ARALYDRAFT_317971 [Arabidopsis lyrata subsp.
lyrata]
gi|297330712|gb|EFH61131.1| hypothetical protein ARALYDRAFT_317971 [Arabidopsis lyrata subsp.
lyrata]
Length = 1115
Score = 50.8 bits (120), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 29/107 (27%), Positives = 57/107 (53%), Gaps = 8/107 (7%)
Query: 1 RLILYPNGNKKGQGTGHISLYLALDESTYFPNNPWEVFVNFTFFVQDRIKNEYLAIRYDD 60
R++++P GN H+S+YL + ++ P W + F+ V +++ N Y +IR +
Sbjct: 84 RILIFPKGN----NVDHLSMYLDVADAANLPYG-WSRYSQFSLAVVNQVNNRY-SIRKET 137
Query: 61 GAVIRLHSMKRECGIDKLIPLQAFKEPSNGYLVDDSCVFGAEIFVIK 107
+ ++ + + G +PL +P+ GYLV+D+ + AE+ V K
Sbjct: 138 QH--QFNARESDWGFTSFMPLSELYDPTRGYLVNDTVLIEAEVAVRK 182
>gi|242034169|ref|XP_002464479.1| hypothetical protein SORBIDRAFT_01g019200 [Sorghum bicolor]
gi|241918333|gb|EER91477.1| hypothetical protein SORBIDRAFT_01g019200 [Sorghum bicolor]
Length = 305
Score = 50.8 bits (120), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 43/159 (27%), Positives = 66/159 (41%), Gaps = 13/159 (8%)
Query: 2 LILYPNGNKKGQGTGHISLYLALDESTYFPNNPWEVFVNFTFFVQDRIKNEYLAIRYDDG 61
L L P K G ++SL L LD S+ P+ E + Q + +R++
Sbjct: 52 LRLNPRDKKSGDDKEYVSLILELDISSVKPDTVVEASFKLLIYDQSYGNHSEYQVRHN-- 109
Query: 62 AVIRLHSMKRECGIDKLIPLQAFKEPSNGYLVDDSCVFGAEIFVIKPTGKGEALS---IV 118
+ G +I L+ KE + ++V++SC FG E F+ T K S V
Sbjct: 110 ----FQTASTSSGASCMISLEKLKERPSKFIVNNSCTFGVE-FIKVTTSKVSTTSETLFV 164
Query: 119 KVPA--QAGNILRWKIPNFSDLRDPEYYSSEFNAGGREW 155
+ P+ W I +F L+ YS EF GG +W
Sbjct: 165 QKPSIFNEAKTYTWDIEDFFALKKFG-YSPEFEVGGYKW 202
>gi|226500514|ref|NP_001144587.1| hypothetical protein [Zea mays]
gi|195642036|gb|ACG40486.1| hypothetical protein [Zea mays]
gi|414871057|tpg|DAA49614.1| TPA: hypothetical protein ZEAMMB73_771653 [Zea mays]
Length = 342
Score = 50.8 bits (120), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 30/90 (33%), Positives = 42/90 (46%), Gaps = 6/90 (6%)
Query: 71 RECGIDKLIPLQAFKEPSNGYLVDDSCVFGAEIFVIKPTGKGEALSIVKVPAQAG----- 125
R GI +I + KEPS+G++V DSCVFG E+ + + V + G
Sbjct: 147 RSSGISCMILVYTLKEPSSGFIVGDSCVFGVELIKFTTAKVKDGSGTLHVQKRIGFCSAR 206
Query: 126 NILRWKIPNFSDLRDPEYYSSEFNAGGREW 155
W I +F L+ YS EF GG +W
Sbjct: 207 EAYTWIINDFLSLKG-RCYSPEFEIGGHKW 235
>gi|356547873|ref|XP_003542329.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 13-like [Glycine
max]
Length = 1118
Score = 50.4 bits (119), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 29/105 (27%), Positives = 56/105 (53%), Gaps = 8/105 (7%)
Query: 1 RLILYPNGNKKGQGTGHISLYLALDESTYFPNNPWEVFVNFTFFVQDRIKNEYLAIRYDD 60
R++++P GN ++S+YL + +S P W + F+ V +++ N+Y ++R D
Sbjct: 85 RVLIFPKGN----NVDYLSMYLDVADSASLPYG-WSRYAQFSLAVVNQMHNKY-SVRKDT 138
Query: 61 GAVIRLHSMKRECGIDKLIPLQAFKEPSNGYLVDDSCVFGAEIFV 105
+ ++ + + G +PL +PS GYLV D+ + AE+ V
Sbjct: 139 QH--QFNARESDWGFTSFMPLGELYDPSRGYLVHDTLIVEAEVLV 181
>gi|357444739|ref|XP_003592647.1| hypothetical protein MTR_1g110530 [Medicago truncatula]
gi|355481695|gb|AES62898.1| hypothetical protein MTR_1g110530 [Medicago truncatula]
Length = 102
Score = 50.4 bits (119), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 31/87 (35%), Positives = 45/87 (51%), Gaps = 22/87 (25%)
Query: 11 KGQ-GTGHISLYLALDESTYFPNNPWEVFVNFTFFVQDRIKNEYLAIRYDDGAVIRLHSM 69
KG+ G G++S+YL L + T P + WE+ N +V R H +
Sbjct: 37 KGEYGQGYVSIYLVLMDPTSLPID-WEINAN--------------------ASVRRFHVL 75
Query: 70 KRECGIDKLIPLQAFKEPSNGYLVDDS 96
K+E GI K I L FK+P+ GYL+DD+
Sbjct: 76 KKEWGIPKFINLDTFKDPTKGYLLDDN 102
>gi|186520708|ref|NP_001119179.1| ubiquitin carboxyl-terminal hydrolase 12 [Arabidopsis thaliana]
gi|332003658|gb|AED91041.1| ubiquitin carboxyl-terminal hydrolase 12 [Arabidopsis thaliana]
Length = 985
Score = 50.4 bits (119), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 29/107 (27%), Positives = 55/107 (51%), Gaps = 8/107 (7%)
Query: 1 RLILYPNGNKKGQGTGHISLYLALDESTYFPNNPWEVFVNFTFFVQDRIKNEYLAIRYDD 60
R++++P GN H+S+YL + ++ P W + F+ V ++I Y +R +
Sbjct: 85 RILIFPKGN----NVDHLSMYLDVSDAASLPYG-WSRYAQFSLAVVNQIHTRY-TVRKET 138
Query: 61 GAVIRLHSMKRECGIDKLIPLQAFKEPSNGYLVDDSCVFGAEIFVIK 107
+ ++ + + G +PL +PS GYLV+D+ + AE+ V K
Sbjct: 139 QH--QFNARESDWGFTSFMPLSELYDPSRGYLVNDTVLVEAEVAVRK 183
>gi|10178116|dbj|BAB11409.1| ubiquitin carboxyl-terminal hydrolase [Arabidopsis thaliana]
Length = 1126
Score = 50.4 bits (119), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 29/107 (27%), Positives = 55/107 (51%), Gaps = 8/107 (7%)
Query: 1 RLILYPNGNKKGQGTGHISLYLALDESTYFPNNPWEVFVNFTFFVQDRIKNEYLAIRYDD 60
R++++P GN H+S+YL + ++ P W + F+ V ++I Y +R +
Sbjct: 94 RILIFPKGN----NVDHLSMYLDVSDAASLPYG-WSRYAQFSLAVVNQIHTRY-TVRKET 147
Query: 61 GAVIRLHSMKRECGIDKLIPLQAFKEPSNGYLVDDSCVFGAEIFVIK 107
+ ++ + + G +PL +PS GYLV+D+ + AE+ V K
Sbjct: 148 QH--QFNARESDWGFTSFMPLSELYDPSRGYLVNDTVLVEAEVAVRK 192
>gi|11993471|gb|AAG42754.1|AF302663_1 ubiquitin-specific protease 12 [Arabidopsis thaliana]
Length = 1116
Score = 50.4 bits (119), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 29/107 (27%), Positives = 55/107 (51%), Gaps = 8/107 (7%)
Query: 1 RLILYPNGNKKGQGTGHISLYLALDESTYFPNNPWEVFVNFTFFVQDRIKNEYLAIRYDD 60
R++++P GN H+S+YL + ++ P W + F+ V ++I Y +R +
Sbjct: 85 RILIFPKGN----NVDHLSMYLDVSDAASLPYG-WSRYAQFSLAVVNQIHTRY-TVRKET 138
Query: 61 GAVIRLHSMKRECGIDKLIPLQAFKEPSNGYLVDDSCVFGAEIFVIK 107
+ ++ + + G +PL +PS GYLV+D+ + AE+ V K
Sbjct: 139 QH--QFNARESDWGFTSFMPLSELYDPSRGYLVNDTVLVEAEVAVRK 183
>gi|359475831|ref|XP_002282789.2| PREDICTED: uncharacterized protein LOC100259525 [Vitis vinifera]
gi|296082057|emb|CBI21062.3| unnamed protein product [Vitis vinifera]
Length = 1683
Score = 50.4 bits (119), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 42/175 (24%), Positives = 78/175 (44%), Gaps = 34/175 (19%)
Query: 1 RLILYPNGNKKGQGTGHISLYLALDESTYFPNNPWEVFVNFTFFVQDRIKNEYLAIRYDD 60
RLI+YP G + Q H+S++L + +S ++ W FV+ V ++ R +D
Sbjct: 443 RLIVYPRG--QSQPPCHLSVFLEVTDSRNTSSD-WSCFVSHRLSVVNQ--------RMED 491
Query: 61 GAVI-----RLHSMKRECGIDKLIPLQAFKEPSNGYLVDDSCVFGAEIFVIKPTGKGEAL 115
+V R ++ G + + L + + +G+LV D+ VF AE+ ++K T L
Sbjct: 492 KSVTKESQNRYSKAAKDWGWREFVTLTSLFDQDSGFLVQDTVVFSAEVLILKETST--ML 549
Query: 116 SIVKVPAQAGN------------ILRWKIPNFSDLRD----PEYYSSEFNAGGRE 154
+ +++ N W++ NF ++ + +S F AGG E
Sbjct: 550 DLTDQDSESSNSGSQIDKIGKRSSFTWRVENFMSFKEIMETRKIFSKFFQAGGCE 604
Score = 38.5 bits (88), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 33/151 (21%), Positives = 67/151 (44%), Gaps = 19/151 (12%)
Query: 1 RLILYPNGNKKGQGTGHISLYLALDESTYFPNNPWEVFVNFTFFVQDRIKNEYLAIRYDD 60
RL++YP G+ + G+IS+YL + + ++ W+ F ++ + + ++ +I D
Sbjct: 100 RLLIYPKGDSQAL-PGYISVYLQIMDPRGSSSSKWDCFASYRLAIVNH-ADDSKSIHRDS 157
Query: 61 GAVIRLHSMKRECGIDKLIPLQAFKEPSNGYLV-DDSCVFGAEIFVIKPT---------- 109
R S K+ G P + +GYL +DS + A+I ++ +
Sbjct: 158 WH--RFSSKKKSHGWCDFTPSTTLFDSKSGYLFNNDSVLITADILILNESVNFTRDNNEL 215
Query: 110 GKGEALSIVKVPAQAGNILR----WKIPNFS 136
+++ + V ++L WK+ NFS
Sbjct: 216 QSASSMASMVVAGPVSDVLSGKFTWKVHNFS 246
>gi|18415260|ref|NP_568171.1| ubiquitin carboxyl-terminal hydrolase 12 [Arabidopsis thaliana]
gi|166201361|sp|Q9FPT1.2|UBP12_ARATH RecName: Full=Ubiquitin carboxyl-terminal hydrolase 12; AltName:
Full=Deubiquitinating enzyme 12; Short=AtUBP12; AltName:
Full=Ubiquitin thioesterase 12; AltName:
Full=Ubiquitin-specific-processing protease 12
gi|332003656|gb|AED91039.1| ubiquitin carboxyl-terminal hydrolase 12 [Arabidopsis thaliana]
Length = 1116
Score = 50.4 bits (119), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 29/107 (27%), Positives = 55/107 (51%), Gaps = 8/107 (7%)
Query: 1 RLILYPNGNKKGQGTGHISLYLALDESTYFPNNPWEVFVNFTFFVQDRIKNEYLAIRYDD 60
R++++P GN H+S+YL + ++ P W + F+ V ++I Y +R +
Sbjct: 85 RILIFPKGN----NVDHLSMYLDVSDAASLPYG-WSRYAQFSLAVVNQIHTRY-TVRKET 138
Query: 61 GAVIRLHSMKRECGIDKLIPLQAFKEPSNGYLVDDSCVFGAEIFVIK 107
+ ++ + + G +PL +PS GYLV+D+ + AE+ V K
Sbjct: 139 QH--QFNARESDWGFTSFMPLSELYDPSRGYLVNDTVLVEAEVAVRK 183
>gi|30681531|ref|NP_850783.1| ubiquitin carboxyl-terminal hydrolase 12 [Arabidopsis thaliana]
gi|13430572|gb|AAK25908.1|AF360198_1 putative ubiquitin-specific protease UBP12 [Arabidopsis thaliana]
gi|23296847|gb|AAN13185.1| putative ubiquitin-specific protease UBP12 [Arabidopsis thaliana]
gi|332003657|gb|AED91040.1| ubiquitin carboxyl-terminal hydrolase 12 [Arabidopsis thaliana]
Length = 1115
Score = 50.4 bits (119), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 29/107 (27%), Positives = 55/107 (51%), Gaps = 8/107 (7%)
Query: 1 RLILYPNGNKKGQGTGHISLYLALDESTYFPNNPWEVFVNFTFFVQDRIKNEYLAIRYDD 60
R++++P GN H+S+YL + ++ P W + F+ V ++I Y +R +
Sbjct: 84 RILIFPKGN----NVDHLSMYLDVSDAASLPYG-WSRYAQFSLAVVNQIHTRY-TVRKET 137
Query: 61 GAVIRLHSMKRECGIDKLIPLQAFKEPSNGYLVDDSCVFGAEIFVIK 107
+ ++ + + G +PL +PS GYLV+D+ + AE+ V K
Sbjct: 138 QH--QFNARESDWGFTSFMPLSELYDPSRGYLVNDTVLVEAEVAVRK 182
>gi|356518240|ref|XP_003527787.1| PREDICTED: uncharacterized protein LOC100788511 [Glycine max]
Length = 1679
Score = 50.4 bits (119), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 44/173 (25%), Positives = 81/173 (46%), Gaps = 30/173 (17%)
Query: 1 RLILYPNGNKKGQGTGHISLYLALDESTYFPNNPWEVFVNFTFFVQDRIKNEYLAIRYDD 60
RLI+YP G + Q H+S++L + +S ++ W FV+ V ++ R +D
Sbjct: 438 RLIVYPRG--QSQPPCHLSVFLEVTDSRNTSSD-WSCFVSHRLSVVNQ--------RMED 486
Query: 61 GAVI-----RLHSMKRECGIDKLIPLQAFKEPSNGYLVDDSCVFGAEIFVIKPTGKGEAL 115
+V R ++ G + + L + + +G+LV D+ +F AE+ ++K T + +
Sbjct: 487 KSVTKESQNRYSKAAKDWGWREFVTLTSLFDQDSGFLVQDTVIFSAEVLILKETSTMQDI 546
Query: 116 S-----IVKVPAQA-GNILR----WKIPNFSDLRD----PEYYSSEFNAGGRE 154
+ + +Q GN R WK+ NF ++ + +S F AGG E
Sbjct: 547 TENDSELSSSGSQVDGNGKRSSFSWKVENFLSFKEIMETRKIFSKFFQAGGCE 599
Score = 37.7 bits (86), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 27/107 (25%), Positives = 52/107 (48%), Gaps = 5/107 (4%)
Query: 1 RLILYPNGNKKGQGTGHISLYLALDESTYFPNNPWEVFVNFTFFVQDRIKNEYLAIRYDD 60
RL++YP G+ + G+IS+YL + + ++ W+ F ++ + + + ++ I D
Sbjct: 90 RLLIYPKGDSQAL-PGYISIYLQIMDPRGTSSSKWDCFASYRLAIVN-LADDSKTIHRDS 147
Query: 61 GAVIRLHSMKRECGIDKLIPLQAFKEPSNGYLVD-DSCVFGAEIFVI 106
R S K+ G P +P GYL + DS + A+I ++
Sbjct: 148 WH--RFSSKKKSHGWCDFTPSNTVFDPKLGYLFNTDSVLITADILIL 192
>gi|414592022|tpg|DAA42593.1| TPA: hypothetical protein ZEAMMB73_989207 [Zea mays]
Length = 1176
Score = 50.4 bits (119), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 31/107 (28%), Positives = 55/107 (51%), Gaps = 8/107 (7%)
Query: 1 RLILYPNGNKKGQGTGHISLYLALDESTYFPNNPWEVFVNFTFFVQDRIKNEYLAIRYDD 60
R++++P GN +S+YL + +S P W + F+ V ++I N++ IR +
Sbjct: 87 RILIFPRGN----NVEFLSMYLDVADSGVLPYG-WTRYAQFSLSVVNQIHNKF-TIRKET 140
Query: 61 GAVIRLHSMKRECGIDKLIPLQAFKEPSNGYLVDDSCVFGAEIFVIK 107
+ + + + G +PL PS GYLV+D+C+ AE+ V K
Sbjct: 141 QH--QFSARESDWGFTSFMPLGELYNPSRGYLVNDTCIVEAEVAVCK 185
>gi|449437160|ref|XP_004136360.1| PREDICTED: uncharacterized protein LOC101209841 [Cucumis sativus]
gi|449516864|ref|XP_004165466.1| PREDICTED: LOW QUALITY PROTEIN: uncharacterized LOC101209841
[Cucumis sativus]
Length = 1686
Score = 50.4 bits (119), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 42/172 (24%), Positives = 77/172 (44%), Gaps = 28/172 (16%)
Query: 1 RLILYPNGNKKGQGTGHISLYLALDESTYFPNNPWEVFVNFTFFVQDRIKNEYLAIRYDD 60
RLI+YP G + Q H+S++L + +S ++ W FV+ V ++ E +
Sbjct: 448 RLIVYPRG--QSQPPCHLSVFLEVTDSRNTSSD-WSCFVSHRLSVVNQKMEEKSVTKESQ 504
Query: 61 GAVIRLHSMKRECGIDKLIPLQAFKEPSNGYLVDDSCVFGAEIFVIK------------- 107
R ++ G + + L + + +G+LV D+ +F AE+ ++K
Sbjct: 505 N---RYSKAAKDWGWREFVTLTSLFDQDSGFLVQDTVIFSAEVLILKETSVMQDFIDQDM 561
Query: 108 -PTGKGEALSIVKVPAQAGNILRWKIPNFSDLRD----PEYYSSEFNAGGRE 154
P+G G S+ A+ + WK+ NF ++ + +S F AGG E
Sbjct: 562 EPSGSG---SLTDKVAKKSS-FTWKVENFLSFKEIMETRKIFSKFFQAGGCE 609
>gi|7267636|emb|CAB80948.1| hypothetical protein [Arabidopsis thaliana]
Length = 291
Score = 50.4 bits (119), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 41/164 (25%), Positives = 70/164 (42%), Gaps = 29/164 (17%)
Query: 1 RLILYPNGNKKGQGTGHISLYLALDESTYFPNNPWEVFVNFTFFVQDRIKNEYLAIRYDD 60
+L ++PNG+ +GT ++SLYL Y D + E LA+ +
Sbjct: 44 KLSVHPNGHTNAKGTHYVSLYLMNQAPVY-----------------DTLTYELLAVSQLE 86
Query: 61 GAVIRLHSMKR-ECGIDKLIPLQAFKE-------PSNGYLVDDSCVFGAEIFVIKPTGKG 112
+ H+ R E ++ + + F+E NG+L+ D C+FG + I+P G
Sbjct: 87 P---KWHTHGRDEYETNEELGSEGFREFISLVDLKKNGFLIGDCCMFGVKFHGIEPAKPG 143
Query: 113 EALSIVKVPAQAGNILRWKIPNFSDLRDPEYY-SSEFNAGGREW 155
A S + + + W + FS + S+EF G R+W
Sbjct: 144 TAESFSLIEKPLNHRVTWMMTMFSSFNPGNVHQSNEFVVGTRKW 187
>gi|186511427|ref|NP_192048.2| TRAF-like family protein [Arabidopsis thaliana]
gi|332656618|gb|AEE82018.1| TRAF-like family protein [Arabidopsis thaliana]
Length = 300
Score = 50.1 bits (118), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 41/164 (25%), Positives = 70/164 (42%), Gaps = 29/164 (17%)
Query: 1 RLILYPNGNKKGQGTGHISLYLALDESTYFPNNPWEVFVNFTFFVQDRIKNEYLAIRYDD 60
+L ++PNG+ +GT ++SLYL Y D + E LA+ +
Sbjct: 53 KLSVHPNGHTNAKGTHYVSLYLMNQAPVY-----------------DTLTYELLAVSQLE 95
Query: 61 GAVIRLHSMKR-ECGIDKLIPLQAFKE-------PSNGYLVDDSCVFGAEIFVIKPTGKG 112
+ H+ R E ++ + + F+E NG+L+ D C+FG + I+P G
Sbjct: 96 P---KWHTHGRDEYETNEELGSEGFREFISLVDLKKNGFLIGDCCMFGVKFHGIEPAKPG 152
Query: 113 EALSIVKVPAQAGNILRWKIPNFSDLRDPEYY-SSEFNAGGREW 155
A S + + + W + FS + S+EF G R+W
Sbjct: 153 TAESFSLIEKPLNHRVTWMMTMFSSFNPGNVHQSNEFVVGTRKW 196
>gi|312282613|dbj|BAJ34172.1| unnamed protein product [Thellungiella halophila]
Length = 1115
Score = 50.1 bits (118), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 30/107 (28%), Positives = 54/107 (50%), Gaps = 8/107 (7%)
Query: 1 RLILYPNGNKKGQGTGHISLYLALDESTYFPNNPWEVFVNFTFFVQDRIKNEYLAIRYDD 60
R++++P GN H+S+YL + ++ P W + F+ V ++I Y IR +
Sbjct: 85 RILIFPKGN----NVDHLSMYLDVSDAASLPYG-WSRYAQFSLAVVNQIHTRY-TIRKET 138
Query: 61 GAVIRLHSMKRECGIDKLIPLQAFKEPSNGYLVDDSCVFGAEIFVIK 107
+ ++ + + G +PL +PS GYLV+D+ AE+ V K
Sbjct: 139 QH--QFNARESDWGFTSFMPLSELYDPSRGYLVNDTVFVEAEVAVRK 183
>gi|356574869|ref|XP_003555566.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 12-like [Glycine
max]
Length = 1118
Score = 50.1 bits (118), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 29/105 (27%), Positives = 55/105 (52%), Gaps = 8/105 (7%)
Query: 1 RLILYPNGNKKGQGTGHISLYLALDESTYFPNNPWEVFVNFTFFVQDRIKNEYLAIRYDD 60
R++++P GN ++S+YL + +S P W + F+ V + N+Y ++R D
Sbjct: 85 RVLIFPKGN----NVDYLSMYLDVADSATLPYG-WSRYAQFSLAVVHQTHNKY-SVRKDT 138
Query: 61 GAVIRLHSMKRECGIDKLIPLQAFKEPSNGYLVDDSCVFGAEIFV 105
+ ++ + + G +PL +PS GYLV+D+ + AE+ V
Sbjct: 139 QH--QFNARESDWGFTSFMPLGELYDPSRGYLVNDTLIVEAEVLV 181
>gi|357156370|ref|XP_003577433.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 12-like
[Brachypodium distachyon]
Length = 1118
Score = 50.1 bits (118), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 32/107 (29%), Positives = 53/107 (49%), Gaps = 8/107 (7%)
Query: 1 RLILYPNGNKKGQGTGHISLYLALDESTYFPNNPWEVFVNFTFFVQDRIKNEYLAIRYDD 60
R++++P GN H+S+YL + +S P W F+ + ++I +Y R D
Sbjct: 87 RVLIFPKGN----NVEHLSMYLDVADSANLPYG-WSRSAQFSLAIVNQIDQKY-TTRKDT 140
Query: 61 GAVIRLHSMKRECGIDKLIPLQAFKEPSNGYLVDDSCVFGAEIFVIK 107
+ + + + G +PL EPS GYLV+D+ V AE+ V K
Sbjct: 141 QH--QFSARESDWGFTSFMPLSELYEPSRGYLVNDTIVVEAEVAVRK 185
>gi|357439271|ref|XP_003589912.1| Ubiquitin carboxyl-terminal hydrolase [Medicago truncatula]
gi|355478960|gb|AES60163.1| Ubiquitin carboxyl-terminal hydrolase [Medicago truncatula]
Length = 1119
Score = 50.1 bits (118), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 27/107 (25%), Positives = 58/107 (54%), Gaps = 8/107 (7%)
Query: 1 RLILYPNGNKKGQGTGHISLYLALDESTYFPNNPWEVFVNFTFFVQDRIKNEYLAIRYDD 60
R++++P GN H+S+Y+ + ++ P W F F+ V +++ ++Y ++R +
Sbjct: 87 RILIFPKGN----NAEHLSMYIDVADAGSMPYG-WTRFAQFSLTVVNQVHSKY-SVRKET 140
Query: 61 GAVIRLHSMKRECGIDKLIPLQAFKEPSNGYLVDDSCVFGAEIFVIK 107
+ ++ + + G +PL +PS GY+V+D C+ A++ V K
Sbjct: 141 QH--QFNARESDWGFTNFMPLAELYDPSRGYVVEDRCILEADVNVRK 185
>gi|356554393|ref|XP_003545531.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 12-like [Glycine
max]
Length = 1126
Score = 49.7 bits (117), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 31/112 (27%), Positives = 57/112 (50%), Gaps = 14/112 (12%)
Query: 1 RLILYPNGNKKGQGTGHISLYLALDESTYFP-------NNPWEVFVNFTFFVQDRIKNEY 53
R++++P GN ++S+YL + +S P W + F+ V ++I N+Y
Sbjct: 86 RVLIFPKGN----NVDYLSMYLDVADSASLPYGWSRYAQFGWSRYAQFSLAVVNQIHNKY 141
Query: 54 LAIRYDDGAVIRLHSMKRECGIDKLIPLQAFKEPSNGYLVDDSCVFGAEIFV 105
++R D + ++ + + G +PL +PS GYLV+D+ V AE+ V
Sbjct: 142 -SVRKDTQH--QFNARESDWGFTSFMPLGELYDPSRGYLVNDTLVVEAEVLV 190
>gi|414877768|tpg|DAA54899.1| TPA: hypothetical protein ZEAMMB73_893644 [Zea mays]
Length = 1122
Score = 49.7 bits (117), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 31/105 (29%), Positives = 54/105 (51%), Gaps = 8/105 (7%)
Query: 1 RLILYPNGNKKGQGTGHISLYLALDESTYFPNNPWEVFVNFTFFVQDRIKNEYLAIRYDD 60
R++++P GN H S+YL + +S P W + F+ V ++I +Y IR D
Sbjct: 90 RVLIFPKGN----NVDHFSMYLDVADSGNLPYG-WSRYAQFSLAVVNQIHPKY-TIRKDT 143
Query: 61 GAVIRLHSMKRECGIDKLIPLQAFKEPSNGYLVDDSCVFGAEIFV 105
+ ++ + + G +PL +PS GYLV+D+ + AE+ V
Sbjct: 144 QH--QFNARESDWGFTSFMPLSDLYDPSRGYLVNDTIIVEAEVAV 186
>gi|357152624|ref|XP_003576181.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 12-like
[Brachypodium distachyon]
Length = 1120
Score = 49.3 bits (116), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 29/107 (27%), Positives = 55/107 (51%), Gaps = 8/107 (7%)
Query: 1 RLILYPNGNKKGQGTGHISLYLALDESTYFPNNPWEVFVNFTFFVQDRIKNEYLAIRYDD 60
R++++P GN H+S+YL + +S P W + F+ + +++ +Y R D
Sbjct: 88 RVLIFPKGN----NVEHLSMYLDVADSGNLPYG-WSRYAQFSLAIVNQVHQKY-TTRKDT 141
Query: 61 GAVIRLHSMKRECGIDKLIPLQAFKEPSNGYLVDDSCVFGAEIFVIK 107
+ ++ + + G +PL +PS GYL++D+ V AE+ V K
Sbjct: 142 QH--QFNARESDWGFTSFMPLSELYDPSRGYLLNDTVVIEAEVAVRK 186
>gi|413923026|gb|AFW62958.1| hypothetical protein ZEAMMB73_330912, partial [Zea mays]
Length = 715
Score = 48.9 bits (115), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 43/175 (24%), Positives = 75/175 (42%), Gaps = 32/175 (18%)
Query: 1 RLILYPNGNKKGQGTGHISLYLALDESTYFPNNP---WEVFVNFTFFVQDRIKNEYLAIR 57
RLI+YP G + Q H+S++L + + P N W FV+ V ++ E ++
Sbjct: 447 RLIVYPRG--QSQPPCHLSVFLEVTD----PRNTTTEWSCFVSHRLSVINQKVEEKSIMK 500
Query: 58 YDDGAVIRLHSMKRECGIDKLIPLQAFKEPSNGYLVDDSCVFGAEIFVIKPTGKGEALS- 116
R ++ G + + L + + G+LV D+ VF AE+ ++K T + L+
Sbjct: 501 ESQN---RYSKSAKDWGWREFVTLTSLFDQDAGFLVQDTVVFSAEVLILKETATMQELTD 557
Query: 117 -------------IVKVPAQAGNILRWKIPNFSDLRD----PEYYSSEFNAGGRE 154
I +P + WK+ NF ++ + +S F AGG E
Sbjct: 558 EDSETCSSTYGCQIEALPKRPS--FTWKVENFVSFKEIMESRKIFSKFFQAGGCE 610
>gi|168015828|ref|XP_001760452.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162688466|gb|EDQ74843.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 1115
Score = 48.9 bits (115), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 30/107 (28%), Positives = 56/107 (52%), Gaps = 8/107 (7%)
Query: 1 RLILYPNGNKKGQGTGHISLYLALDESTYFPNNPWEVFVNFTFFVQDRIKNEYLAIRYDD 60
R++L+P GN H+S+YL + +S P W F +FT V ++I + L ++ D
Sbjct: 81 RVLLFPKGN----NVDHLSIYLDVADSAQLPYG-WSRFAHFTLAVVNQI-DPKLTVKKDT 134
Query: 61 GAVIRLHSMKRECGIDKLIPLQAFKEPSNGYLVDDSCVFGAEIFVIK 107
+ + + + G +PL +PS G++V+D+ + A++ V K
Sbjct: 135 QH--QFNVRESDWGFTSFMPLHDLNDPSRGFVVNDTLIVEADVNVRK 179
>gi|77551602|gb|ABA94399.1| Ubiquitin carboxyl-terminal hydrolase family protein, expressed
[Oryza sativa Japonica Group]
Length = 1451
Score = 48.9 bits (115), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 29/96 (30%), Positives = 50/96 (52%), Gaps = 8/96 (8%)
Query: 1 RLILYPNGNKKGQGTGHISLYLALDESTYFPNNPWEVFVNFTFFVQDRIKNEYLAIRYDD 60
R++++P GN H S+YL + +S P W + F+ V ++I+ +Y IR D
Sbjct: 85 RVLIFPKGN----NVDHFSMYLDVADSANLPYG-WSRYAQFSLAVVNQIQQKY-TIRKDT 138
Query: 61 GAVIRLHSMKRECGIDKLIPLQAFKEPSNGYLVDDS 96
+ ++ + + G +PL +PS GYLVDD+
Sbjct: 139 QH--QFNARESDWGFTSFMPLSELYDPSRGYLVDDT 172
>gi|297825583|ref|XP_002880674.1| hypothetical protein ARALYDRAFT_481390 [Arabidopsis lyrata subsp.
lyrata]
gi|297326513|gb|EFH56933.1| hypothetical protein ARALYDRAFT_481390 [Arabidopsis lyrata subsp.
lyrata]
Length = 828
Score = 48.9 bits (115), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 41/165 (24%), Positives = 73/165 (44%), Gaps = 16/165 (9%)
Query: 1 RLILYPNGNKKGQGTGHISLYLALDESTYFPNNPWEVFVNFTFFVQDRIKNEYLAIRYDD 60
RLI+YP G K H+S++L + +S ++ FV+ V ++ E +
Sbjct: 406 RLIVYPRGQSKAPCL-HLSVFLEVTDSRSSSSDW-SCFVSHQLSVVNQRSEEMSVTKESQ 463
Query: 61 GAVIRLHSMKRECGIDKLIPLQAFKEPSNGYLVDDSCVFGAEIFVIKPTG-------KGE 113
R ++ G + + L + + +G+LV DS VF AE+ ++K T
Sbjct: 464 N---RYSKAAKDWGWREFVTLTSLFDQDSGFLVQDSVVFSAEVLILKETSLTKDYREAES 520
Query: 114 ALSIVKVPAQAGNILRWKIPNFSDLRD----PEYYSSEFNAGGRE 154
A S+ ++ + WK+ NF ++ + +S F AGG E
Sbjct: 521 ANSVSQIDNTVKSSFTWKVENFLAFKEIMETRKIFSKFFQAGGCE 565
>gi|125534834|gb|EAY81382.1| hypothetical protein OsI_36553 [Oryza sativa Indica Group]
Length = 1148
Score = 48.5 bits (114), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 29/96 (30%), Positives = 50/96 (52%), Gaps = 8/96 (8%)
Query: 1 RLILYPNGNKKGQGTGHISLYLALDESTYFPNNPWEVFVNFTFFVQDRIKNEYLAIRYDD 60
R++++P GN H S+YL + +S P W + F+ V ++I+ +Y IR D
Sbjct: 85 RVLIFPKGN----NVDHFSMYLDVADSANLPYG-WSRYAQFSLAVVNQIQQKY-TIRKDT 138
Query: 61 GAVIRLHSMKRECGIDKLIPLQAFKEPSNGYLVDDS 96
+ ++ + + G +PL +PS GYLVDD+
Sbjct: 139 QH--QFNARESDWGFTSFMPLSELYDPSRGYLVDDT 172
>gi|222616179|gb|EEE52311.1| hypothetical protein OsJ_34325 [Oryza sativa Japonica Group]
Length = 1142
Score = 48.5 bits (114), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 29/96 (30%), Positives = 50/96 (52%), Gaps = 8/96 (8%)
Query: 1 RLILYPNGNKKGQGTGHISLYLALDESTYFPNNPWEVFVNFTFFVQDRIKNEYLAIRYDD 60
R++++P GN H S+YL + +S P W + F+ V ++I+ +Y IR D
Sbjct: 85 RVLIFPKGN----NVDHFSMYLDVADSANLPYG-WSRYAQFSLAVVNQIQQKY-TIRKDT 138
Query: 61 GAVIRLHSMKRECGIDKLIPLQAFKEPSNGYLVDDS 96
+ ++ + + G +PL +PS GYLVDD+
Sbjct: 139 QH--QFNARESDWGFTSFMPLSELYDPSRGYLVDDT 172
>gi|222623231|gb|EEE57363.1| hypothetical protein OsJ_07511 [Oryza sativa Japonica Group]
Length = 1610
Score = 48.5 bits (114), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 44/174 (25%), Positives = 74/174 (42%), Gaps = 31/174 (17%)
Query: 1 RLILYPNGNKKGQGTGHISLYLALDESTYFPNNP--WEVFVNFTFFVQDRIKNEYLAIRY 58
RLI+YP G + Q ++S++L + + P N W FV+ V ++ E ++
Sbjct: 424 RLIVYPRG--QSQPPCNLSVFLEVTD----PRNSSEWSCFVSHRLSVINQKLEERTIVKE 477
Query: 59 DDGAVIRLHSMKRECGIDKLIPLQAFKEPSNGYLVDDSCVFGAEIFVIKPTGKGEALS-- 116
R ++ G + + L + G+LV D+ VF AE+ ++K T + LS
Sbjct: 478 SQN---RYSKSAKDWGWREFVTLTVLFDQDAGFLVQDTVVFAAEVLILKETATIQELSDE 534
Query: 117 ------------IVKVPAQAGNILRWKIPNFSDLRD----PEYYSSEFNAGGRE 154
I +P + WK+ NF +D + +S F AGG E
Sbjct: 535 DSEACSSGSGCQIDSLPKRPS--FTWKVENFLSFKDIMETRKIFSKYFQAGGCE 586
>gi|218191159|gb|EEC73586.1| hypothetical protein OsI_08052 [Oryza sativa Indica Group]
Length = 1667
Score = 48.5 bits (114), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 44/174 (25%), Positives = 74/174 (42%), Gaps = 31/174 (17%)
Query: 1 RLILYPNGNKKGQGTGHISLYLALDESTYFPNNP--WEVFVNFTFFVQDRIKNEYLAIRY 58
RLI+YP G + Q ++S++L + + P N W FV+ V ++ E ++
Sbjct: 423 RLIVYPRG--QSQPPCNLSVFLEVTD----PRNSSEWSCFVSHRLSVINQKLEERTIVKE 476
Query: 59 DDGAVIRLHSMKRECGIDKLIPLQAFKEPSNGYLVDDSCVFGAEIFVIKPTGKGEALS-- 116
R ++ G + + L + G+LV D+ VF AE+ ++K T + LS
Sbjct: 477 SQN---RYSKSAKDWGWREFVTLTVLFDQDAGFLVQDTVVFAAEVLILKETATIQELSDE 533
Query: 117 ------------IVKVPAQAGNILRWKIPNFSDLRD----PEYYSSEFNAGGRE 154
I +P + WK+ NF +D + +S F AGG E
Sbjct: 534 DSEACSSGSGCQIDSLPKRPS--FTWKVENFLSFKDIMETRKIFSKYFQAGGCE 585
>gi|30685481|ref|NP_180847.2| TRAF-like family protein [Arabidopsis thaliana]
gi|330253662|gb|AEC08756.1| TRAF-like family protein [Arabidopsis thaliana]
Length = 318
Score = 48.1 bits (113), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 32/112 (28%), Positives = 50/112 (44%), Gaps = 6/112 (5%)
Query: 1 RLILYPNGNKKGQGTGHISLYLALDESTYFPNN--PWEVFVNFTFFVQDRIKNEYLAIRY 58
+L++YP G G+G SL L L+ S Y NN F + V D++ + I
Sbjct: 207 KLVMYPRGTGDGKGN---SLSLYLNASNYVTNNGPKGRTFAVYKLRVLDQLHRNHFEIDC 263
Query: 59 DDGAVIR-LHSMKRECGIDKLIPLQAFKEPSNGYLVDDSCVFGAEIFVIKPT 109
D + +H G K +PL+ + S G+LV+D G E ++ T
Sbjct: 264 QDWFLYDPVHPRLCSWGRTKFLPLEELHKASRGFLVNDQIYIGVEFLIVSTT 315
Score = 46.6 bits (109), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 43/144 (29%), Positives = 62/144 (43%), Gaps = 24/144 (16%)
Query: 24 LDESTYFPNNPWEVFVNFTFFVQDRIKNEYLAIRYDDGAVIRLHSMKREC-GIDKLIPLQ 82
+DE PN WEV NF + + EY + + H+ K+ G+ K I
Sbjct: 75 IDEKCTGPN--WEVKFNFKIGLLPQTGPEYFYVS------VGCHNEKQPAQGVVKFITHT 126
Query: 83 AFKEPSNGYLVDDSCVFGAEI-------FVI----KPTGKGEALSIVKVPAQAGNILRWK 131
KE +LV+D VF AEI F++ + G E +++V A+ + WK
Sbjct: 127 QLKER---FLVNDKAVFYAEISEEVIPNFLVTGIPRTMGTAERFKLIEV-ARNNSRFTWK 182
Query: 132 IPNFSDLRDPEYYSSEFNAGGREW 155
I FS E+ S EF G R W
Sbjct: 183 ITKFSSFNGEEHSSYEFTVGPRRW 206
>gi|26451760|dbj|BAC42975.1| unknown protein [Arabidopsis thaliana]
Length = 318
Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 32/112 (28%), Positives = 49/112 (43%), Gaps = 6/112 (5%)
Query: 1 RLILYPNGNKKGQGTGHISLYLALDESTYFPNN--PWEVFVNFTFFVQDRIKNEYLAIRY 58
+L++YP G G+G SL L L S Y NN F + V D++ + I
Sbjct: 207 KLVMYPRGTGDGKGN---SLSLYLSASNYVTNNGPKGRTFAVYKLRVLDQLHRNHFEIDC 263
Query: 59 DDGAVIR-LHSMKRECGIDKLIPLQAFKEPSNGYLVDDSCVFGAEIFVIKPT 109
D + +H G K +PL+ + S G+LV+D G E ++ T
Sbjct: 264 QDWFLYDPVHPRLCSWGRTKFLPLEELHKASRGFLVNDQIYIGVEFLIVSTT 315
Score = 46.6 bits (109), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 43/144 (29%), Positives = 62/144 (43%), Gaps = 24/144 (16%)
Query: 24 LDESTYFPNNPWEVFVNFTFFVQDRIKNEYLAIRYDDGAVIRLHSMKREC-GIDKLIPLQ 82
+DE PN WEV NF + + EY + + H+ K+ G+ K I
Sbjct: 75 IDEKCTGPN--WEVKFNFKIGLLPQTGPEYFYVS------VGCHNEKQPAQGVVKFITHT 126
Query: 83 AFKEPSNGYLVDDSCVFGAEI-------FVI----KPTGKGEALSIVKVPAQAGNILRWK 131
KE +LV+D VF AEI F++ + G E +++V A+ + WK
Sbjct: 127 QLKER---FLVNDKAVFYAEISEEVIPNFLVTGIPRTMGTAERFKLIEV-ARNNSRFTWK 182
Query: 132 IPNFSDLRDPEYYSSEFNAGGREW 155
I FS E+ S EF G R W
Sbjct: 183 ITKFSSFNGEEHSSYEFTVGPRRW 206
>gi|242065764|ref|XP_002454171.1| hypothetical protein SORBIDRAFT_04g025910 [Sorghum bicolor]
gi|241934002|gb|EES07147.1| hypothetical protein SORBIDRAFT_04g025910 [Sorghum bicolor]
Length = 1665
Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 43/175 (24%), Positives = 74/175 (42%), Gaps = 32/175 (18%)
Query: 1 RLILYPNGNKKGQGTGHISLYLALDESTYFPNNP---WEVFVNFTFFVQDRIKNEYLAIR 57
RLI+YP G + Q H+S++L + + P N W FV+ V ++ E +
Sbjct: 422 RLIVYPRG--QSQPPCHLSVFLEVTD----PRNTTTEWSCFVSHRLSVINQKVEEKSITK 475
Query: 58 YDDGAVIRLHSMKRECGIDKLIPLQAFKEPSNGYLVDDSCVFGAEIFVIKPTGKGEALS- 116
R ++ G + + L + + G+LV D+ VF AE+ ++K T + L+
Sbjct: 476 ESQN---RYSKSAKDWGWREFVTLTSLFDQDAGFLVQDTVVFSAEVLILKETATMQELTD 532
Query: 117 -------------IVKVPAQAGNILRWKIPNFSDLRD----PEYYSSEFNAGGRE 154
I +P + WK+ NF ++ + +S F AGG E
Sbjct: 533 EDSEICSSTYGCQIEALPKRPS--FTWKVENFLSFKEIMESRKIFSKFFQAGGCE 585
>gi|195629386|gb|ACG36334.1| hypothetical protein [Zea mays]
gi|414886745|tpg|DAA62759.1| TPA: hypothetical protein ZEAMMB73_943507 [Zea mays]
Length = 256
Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 37/142 (26%), Positives = 70/142 (49%), Gaps = 12/142 (8%)
Query: 18 ISLYLALDESTYFPNNPWEVFVNFTFFVQDRIKNEYLAIRYDDGAVIRLHSMKRECGIDK 77
+SL L L +S+ + +E +F F + D++ ++ + + + + I
Sbjct: 18 VSLRLELSQSSVKLDTIFEA--SFKFMIYDQLIGKH-KVHLGNHS---FQTASTSSAIAF 71
Query: 78 LIPLQAFKEPSNGYLVDDSCVFGA---EIFVIKPTGKGEALSIVKVPA-QAGNILRWKIP 133
++PL+A ++ S ++V++SCVFG ++ IK E L + K+ + WKI
Sbjct: 72 MLPLKALRQSSR-FIVNNSCVFGIGFIKVATIKVNTTLETLFVRKMNIFNEAKVYTWKIE 130
Query: 134 NFSDLRDPEYYSSEFNAGGREW 155
+FS L++P +S EF G W
Sbjct: 131 DFSALKNPS-HSPEFEIAGYTW 151
>gi|357512845|ref|XP_003626711.1| hypothetical protein MTR_8g006180 [Medicago truncatula]
gi|355520733|gb|AET01187.1| hypothetical protein MTR_8g006180 [Medicago truncatula]
Length = 192
Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 37/99 (37%), Positives = 43/99 (43%), Gaps = 23/99 (23%)
Query: 59 DDGAVIR-LHSMKRECGIDKLIPL-QAFKEPSNGYLVDDSCVFGAEIFVIKPTGKGEALS 116
+DGA +R K ECG +KLI L + F SNGY V DSC FG PT L
Sbjct: 52 EDGAKVRTFCEEKTECGFEKLISLKELFDHKSNGYCVKDSCKFG------NPTITPFTL- 104
Query: 117 IVKVPAQAGNILRWKIPNFSDLRDPEYYSSEFNAGGREW 155
K+ NFS L Y S F G R+W
Sbjct: 105 --------------KLKNFSTLNGLSYGSETFADGERDW 129
>gi|357494231|ref|XP_003617404.1| Ubiquitin carboxyl-terminal hydrolase family protein [Medicago
truncatula]
gi|355518739|gb|AET00363.1| Ubiquitin carboxyl-terminal hydrolase family protein [Medicago
truncatula]
Length = 703
Score = 47.0 bits (110), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 28/104 (26%), Positives = 51/104 (49%), Gaps = 11/104 (10%)
Query: 2 LILYPNGNKKGQGTGHISLYLALDESTYFPNNPWEVFVNFTFFVQDRIKNEYLAIRYDDG 61
+I++P G+ H+S+Y + +S PN W ++ FT + ++I E +
Sbjct: 76 VIIFPEGD---NAMDHLSMYFGVADSENLPNG-WSIYAQFTMSLVNQINAEDSVTKD--- 128
Query: 62 AVIRLHSMKREC--GIDKLIPLQAFKEPSNGYLVDDSCVFGAEI 103
+R ++EC G IPL +PS GY+V+++ V E+
Sbjct: 129 --LRHRFNEQECDWGEPSFIPLDELSDPSRGYVVNNTLVVEVEV 170
>gi|212722038|ref|NP_001131880.1| uncharacterized protein LOC100193259 [Zea mays]
gi|194692806|gb|ACF80487.1| unknown [Zea mays]
gi|414886744|tpg|DAA62758.1| TPA: hypothetical protein ZEAMMB73_943507 [Zea mays]
Length = 328
Score = 46.6 bits (109), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 37/142 (26%), Positives = 70/142 (49%), Gaps = 12/142 (8%)
Query: 18 ISLYLALDESTYFPNNPWEVFVNFTFFVQDRIKNEYLAIRYDDGAVIRLHSMKRECGIDK 77
+SL L L +S+ + +E +F F + D++ ++ + + + + I
Sbjct: 90 VSLRLELSQSSVKLDTIFEA--SFKFMIYDQLIGKH-KVHLGNHS---FQTASTSSAIAF 143
Query: 78 LIPLQAFKEPSNGYLVDDSCVFGA---EIFVIKPTGKGEALSIVKVPA-QAGNILRWKIP 133
++PL+A ++ S ++V++SCVFG ++ IK E L + K+ + WKI
Sbjct: 144 MLPLKALRQSSR-FIVNNSCVFGIGFIKVATIKVNTTLETLFVRKMNIFNEAKVYTWKIE 202
Query: 134 NFSDLRDPEYYSSEFNAGGREW 155
+FS L++P +S EF G W
Sbjct: 203 DFSALKNPS-HSPEFEIAGYTW 223
>gi|242058855|ref|XP_002458573.1| hypothetical protein SORBIDRAFT_03g035900 [Sorghum bicolor]
gi|241930548|gb|EES03693.1| hypothetical protein SORBIDRAFT_03g035900 [Sorghum bicolor]
Length = 720
Score = 46.6 bits (109), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 29/107 (27%), Positives = 57/107 (53%), Gaps = 8/107 (7%)
Query: 1 RLILYPNGNKKGQGTGHISLYLALDESTYFPNNPWEVFVNFTFFVQDRIKNEYLAIRYDD 60
R++++P GN H+S+YL + +S P W F+ V +++ ++ ++R +
Sbjct: 70 RVLVFPRGN----NGDHLSMYLDVADSNLLPPG-WSRNAQFSLAVVNQLDSK-ASLRKE- 122
Query: 61 GAVIRLHSMKRECGIDKLIPLQAFKEPSNGYLVDDSCVFGAEIFVIK 107
A+ + +S + + G +PL + S GY+V+D C+ AE+ V K
Sbjct: 123 -AIHQFNSRESDWGFTSFMPLLDLYDSSKGYVVNDKCIIEAEVAVRK 168
>gi|297840879|ref|XP_002888321.1| hypothetical protein ARALYDRAFT_338626 [Arabidopsis lyrata subsp.
lyrata]
gi|297334162|gb|EFH64580.1| hypothetical protein ARALYDRAFT_338626 [Arabidopsis lyrata subsp.
lyrata]
Length = 245
Score = 46.6 bits (109), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 34/117 (29%), Positives = 59/117 (50%), Gaps = 12/117 (10%)
Query: 41 FTFFVQDRIKNEYLAIRYDDGAVIRLHSMKRECGIDKLIPLQAFKEPSNGYLV-DDSCVF 99
TFFV + +YL+I+ D V R +S K G+ + + ++A K+ + G+++ + F
Sbjct: 33 LTFFVFSEEEKKYLSIQ--DVEVKRFNSSKTVWGLSQALSIEALKDRAKGFILYGELHEF 90
Query: 100 GAEIFVI-KPTGKGEALSIVKVPAQAGNILRWKIPNFSDLRDPEYYSSEFNAGGREW 155
GA + ++ +P GE L K W I +FS LR + S F+ G ++W
Sbjct: 91 GAHVKIVSRPDSFGEDLPFHK--------FSWTIRDFSLLRQNDCVSKTFHMGEKDW 139
>gi|2702282|gb|AAB91985.1| unknown protein [Arabidopsis thaliana]
Length = 285
Score = 46.6 bits (109), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 43/144 (29%), Positives = 62/144 (43%), Gaps = 24/144 (16%)
Query: 24 LDESTYFPNNPWEVFVNFTFFVQDRIKNEYLAIRYDDGAVIRLHSMKREC-GIDKLIPLQ 82
+DE PN WEV NF + + EY + + H+ K+ G+ K I
Sbjct: 75 IDEKCTGPN--WEVKFNFKIGLLPQTGPEYFYVS------VGCHNEKQPAQGVVKFITHT 126
Query: 83 AFKEPSNGYLVDDSCVFGAEI-------FVI----KPTGKGEALSIVKVPAQAGNILRWK 131
KE +LV+D VF AEI F++ + G E +++V A+ + WK
Sbjct: 127 QLKER---FLVNDKAVFYAEISEEVIPNFLVTGIPRTMGTAERFKLIEV-ARNNSRFTWK 182
Query: 132 IPNFSDLRDPEYYSSEFNAGGREW 155
I FS E+ S EF G R W
Sbjct: 183 ITKFSSFNGEEHSSYEFTVGPRRW 206
>gi|195644196|gb|ACG41566.1| hypothetical protein [Zea mays]
gi|414871061|tpg|DAA49618.1| TPA: hypothetical protein ZEAMMB73_771653 [Zea mays]
Length = 189
Score = 46.2 bits (108), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 27/83 (32%), Positives = 39/83 (46%), Gaps = 6/83 (7%)
Query: 78 LIPLQAFKEPSNGYLVDDSCVFGAEIFVIKPTGKGEALSIVKVPAQAG-----NILRWKI 132
+I + KEPS+G++V DSCVFG E+ + + V + G W I
Sbjct: 1 MILVYTLKEPSSGFIVGDSCVFGVELIKFTTAKVKDGSGTLHVQKRIGFCSAREAYTWII 60
Query: 133 PNFSDLRDPEYYSSEFNAGGREW 155
+F L+ YS EF GG +W
Sbjct: 61 NDFLSLKG-RCYSPEFEIGGHKW 82
>gi|21593233|gb|AAM65182.1| unknown [Arabidopsis thaliana]
Length = 290
Score = 46.2 bits (108), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 38/158 (24%), Positives = 70/158 (44%), Gaps = 18/158 (11%)
Query: 1 RLILYPNGNKKGQGTGHISLYLALDESTYFPNNPWEVFVNFTFFVQDRIKNEYLAIRYDD 60
+L +YPNG+K +GT H+S++L P + V +++ ++ D+
Sbjct: 44 KLSVYPNGHKNAKGT-HVSMFLV-------NQVPVNDMPTYELLVVSQLERKWHTHGRDE 95
Query: 61 GAVIRLHSMKRECGIDKLIPLQAFKEPSNGYLVDDSCVFGAEIFVIKPT--GKGEALSIV 118
++ G + I L + G+L+ D C+FG + I+P G E S++
Sbjct: 96 ---FDINPEPASEGFLRFISLADLER--KGFLIGDCCMFGVKFHGIEPANPGTAECFSLI 150
Query: 119 KVPAQAGNILRWKIPNFSDLR-DPEYYSSEFNAGGREW 155
+ P + + W + FS + S+EF G R+W
Sbjct: 151 EKPLN--HKVTWMMSKFSSFNPGKAHQSNEFVVGTRKW 186
>gi|293333324|ref|NP_001168153.1| uncharacterized protein LOC100381904 [Zea mays]
gi|223946349|gb|ACN27258.1| unknown [Zea mays]
gi|414886749|tpg|DAA62763.1| TPA: hypothetical protein ZEAMMB73_943507 [Zea mays]
Length = 110
Score = 46.2 bits (108), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 28/86 (32%), Positives = 46/86 (53%), Gaps = 6/86 (6%)
Query: 74 GIDKLIPLQAFKEPSNGYLVDDSCVFGA---EIFVIKPTGKGEALSIVKVPA-QAGNILR 129
I ++PL+A ++ S ++V++SCVFG ++ IK E L + K+ +
Sbjct: 27 AIAFMLPLKALRQSSR-FIVNNSCVFGIGFIKVATIKVNTTLETLFVRKMNIFNEAKVYT 85
Query: 130 WKIPNFSDLRDPEYYSSEFNAGGREW 155
WKI +FS L++P +S EF G W
Sbjct: 86 WKIEDFSALKNPS-HSPEFEIAGYTW 110
>gi|28436595|gb|AAO43363.1| unknown [Arabidopsis thaliana]
gi|28436597|gb|AAO43364.1| unknown [Arabidopsis thaliana]
Length = 164
Score = 46.2 bits (108), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 33/106 (31%), Positives = 51/106 (48%), Gaps = 12/106 (11%)
Query: 52 EYLAIRYDDGAVIRLHSMKRECGIDKLIPLQAFKEPSNGYLVD-DSCVFGAEIFVIK-PT 109
+YL+I+ D V R S K G+ K + L+ F +P+ G++V+ + C FGA + + P
Sbjct: 1 KYLSIQ--DVEVKRFSSSKTVWGLPKAMSLETFTDPAKGFIVEGEPCEFGAHVKIASSPV 58
Query: 110 GKGEALSIVKVPAQAGNILRWKIPNFSDLRDPEYYSSEFNAGGREW 155
E L K W I +FS L+ + S F GG+ W
Sbjct: 59 PVDENLPFQK--------FSWSIRDFSVLKQNDCISKTFAMGGKNW 96
>gi|18411442|ref|NP_567187.1| TRAF-like family protein [Arabidopsis thaliana]
gi|17529102|gb|AAL38761.1| unknown protein [Arabidopsis thaliana]
gi|20259121|gb|AAM14276.1| unknown protein [Arabidopsis thaliana]
gi|332656535|gb|AEE81935.1| TRAF-like family protein [Arabidopsis thaliana]
Length = 299
Score = 46.2 bits (108), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 38/158 (24%), Positives = 70/158 (44%), Gaps = 18/158 (11%)
Query: 1 RLILYPNGNKKGQGTGHISLYLALDESTYFPNNPWEVFVNFTFFVQDRIKNEYLAIRYDD 60
+L +YPNG+K +GT H+S++L P + V +++ ++ D+
Sbjct: 53 KLSVYPNGHKNAKGT-HVSMFLV-------NQVPVNDMPTYELLVVSQLERKWHTHGRDE 104
Query: 61 GAVIRLHSMKRECGIDKLIPLQAFKEPSNGYLVDDSCVFGAEIFVIKPT--GKGEALSIV 118
++ G + I L + G+L+ D C+FG + I+P G E S++
Sbjct: 105 ---FDINPEPASEGFLRFISLADLER--KGFLIGDCCMFGVKFHGIEPANPGTAECFSLI 159
Query: 119 KVPAQAGNILRWKIPNFSDLR-DPEYYSSEFNAGGREW 155
+ P + + W + FS + S+EF G R+W
Sbjct: 160 EKPLN--HKVTWMMSKFSSFNPGKAHQSNEFVVGTRKW 195
>gi|28436579|gb|AAO43355.1| unknown [Arabidopsis thaliana]
gi|28436581|gb|AAO43356.1| unknown [Arabidopsis thaliana]
gi|28436583|gb|AAO43357.1| unknown [Arabidopsis thaliana]
gi|28436585|gb|AAO43358.1| unknown [Arabidopsis thaliana]
Length = 164
Score = 46.2 bits (108), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 33/106 (31%), Positives = 51/106 (48%), Gaps = 12/106 (11%)
Query: 52 EYLAIRYDDGAVIRLHSMKRECGIDKLIPLQAFKEPSNGYLVD-DSCVFGAEIFVIK-PT 109
+YL+I+ D V R S K G+ K + L+ F +P+ G++V+ + C FGA + + P
Sbjct: 1 KYLSIQ--DVEVKRFSSSKTVWGLPKAMSLETFTDPAKGFIVEGEPCEFGAHVKIASSPV 58
Query: 110 GKGEALSIVKVPAQAGNILRWKIPNFSDLRDPEYYSSEFNAGGREW 155
E L K W I +FS L+ + S F GG+ W
Sbjct: 59 PVDENLPFHK--------FSWSIRDFSVLKQNDCISKTFAMGGKNW 96
>gi|28436589|gb|AAO43360.1| unknown [Arabidopsis thaliana]
Length = 164
Score = 46.2 bits (108), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 33/106 (31%), Positives = 51/106 (48%), Gaps = 12/106 (11%)
Query: 52 EYLAIRYDDGAVIRLHSMKRECGIDKLIPLQAFKEPSNGYLVD-DSCVFGAEIFVIK-PT 109
+YL+I+ D V R S K G+ K + L+ F +P+ G++V+ + C FGA + + P
Sbjct: 1 KYLSIQ--DVEVKRFSSSKTVWGLPKAMSLETFTDPAKGFIVEGEPCEFGAHVKIASSPV 58
Query: 110 GKGEALSIVKVPAQAGNILRWKIPNFSDLRDPEYYSSEFNAGGREW 155
E L K W I +FS L+ + S F GG+ W
Sbjct: 59 PVDENLPFHK--------FSWSIRDFSVLKQNDCISKTFAMGGKNW 96
>gi|28436587|gb|AAO43359.1| unknown [Arabidopsis thaliana]
Length = 164
Score = 45.8 bits (107), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 33/106 (31%), Positives = 51/106 (48%), Gaps = 12/106 (11%)
Query: 52 EYLAIRYDDGAVIRLHSMKRECGIDKLIPLQAFKEPSNGYLVD-DSCVFGAEIFVIK-PT 109
+YL+I+ D V R S K G+ K + L+ F +P+ G++V+ + C FGA + + P
Sbjct: 1 KYLSIQ--DVEVKRFSSSKTVWGLPKAMSLETFTDPAKGFIVEGEPCEFGAHVKIASSPV 58
Query: 110 GKGEALSIVKVPAQAGNILRWKIPNFSDLRDPEYYSSEFNAGGREW 155
E L K W I +FS L+ + S F GG+ W
Sbjct: 59 PVDENLPFHK--------FSWSIRDFSVLKQNDCISKTFAMGGKNW 96
>gi|28436593|gb|AAO43362.1| unknown [Arabidopsis thaliana]
Length = 164
Score = 45.8 bits (107), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 33/106 (31%), Positives = 51/106 (48%), Gaps = 12/106 (11%)
Query: 52 EYLAIRYDDGAVIRLHSMKRECGIDKLIPLQAFKEPSNGYLVD-DSCVFGAEIFVIK-PT 109
+YL+I+ D V R S K G+ K + L+ F +P+ G++V+ + C FGA + + P
Sbjct: 1 KYLSIQ--DVEVKRFSSSKTVWGLPKAMSLETFTDPAKGFIVEGEPCEFGAHVKIASSPV 58
Query: 110 GKGEALSIVKVPAQAGNILRWKIPNFSDLRDPEYYSSEFNAGGREW 155
E L K W I +FS L+ + S F GG+ W
Sbjct: 59 PVDENLPFHK--------FSWSIRDFSVLKQNDCISKTFAMGGKNW 96
>gi|28436591|gb|AAO43361.1| unknown [Arabidopsis thaliana]
Length = 164
Score = 45.8 bits (107), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 33/106 (31%), Positives = 51/106 (48%), Gaps = 12/106 (11%)
Query: 52 EYLAIRYDDGAVIRLHSMKRECGIDKLIPLQAFKEPSNGYLVD-DSCVFGAEIFVIK-PT 109
+YL+I+ D V R S K G+ K + L+ F +P+ G++V+ + C FGA + + P
Sbjct: 1 KYLSIQ--DVEVKRFSSSKTVWGLPKAMSLETFTDPAKGFIVEGEPCEFGAHVKIASSPV 58
Query: 110 GKGEALSIVKVPAQAGNILRWKIPNFSDLRDPEYYSSEFNAGGREW 155
E L K W I +FS L+ + S F GG+ W
Sbjct: 59 PVDENLPFHK--------FSWSIRDFSVLKQNDCISKTFAMGGKNW 96
>gi|2252859|gb|AAB62857.1| A_TM018A10.12 gene product [Arabidopsis thaliana]
gi|7267417|emb|CAB80887.1| AT4g00780 [Arabidopsis thaliana]
Length = 265
Score = 45.8 bits (107), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 38/158 (24%), Positives = 70/158 (44%), Gaps = 18/158 (11%)
Query: 1 RLILYPNGNKKGQGTGHISLYLALDESTYFPNNPWEVFVNFTFFVQDRIKNEYLAIRYDD 60
+L +YPNG+K +GT H+S++L P + V +++ ++ D+
Sbjct: 44 KLSVYPNGHKNAKGT-HVSMFLV-------NQVPVNDMPTYELLVVSQLERKWHTHGRDE 95
Query: 61 GAVIRLHSMKRECGIDKLIPLQAFKEPSNGYLVDDSCVFGAEIFVIKPT--GKGEALSIV 118
++ G + I L + G+L+ D C+FG + I+P G E S++
Sbjct: 96 ---FDINPEPASEGFLRFISLADLER--KGFLIGDCCMFGVKFHGIEPANPGTAECFSLI 150
Query: 119 KVPAQAGNILRWKIPNFSDLR-DPEYYSSEFNAGGREW 155
+ P + + W + FS + S+EF G R+W
Sbjct: 151 EKPLN--HKVTWMMSKFSSFNPGKAHQSNEFVVGTRKW 186
>gi|357466147|ref|XP_003603358.1| CGS1 mRNA stability [Medicago truncatula]
gi|355492406|gb|AES73609.1| CGS1 mRNA stability [Medicago truncatula]
Length = 1714
Score = 45.8 bits (107), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 37/168 (22%), Positives = 73/168 (43%), Gaps = 20/168 (11%)
Query: 1 RLILYPNGNKKGQGTGHISLYLALDESTYFPNNPWEVFVNFTFFVQDRIKNEYLAIRYDD 60
RLI+YP G + Q H+S++L + +S ++ W FV+ V ++ + +
Sbjct: 444 RLIVYPRG--QSQPPCHLSVFLEVTDSRNSSSD-WSCFVSHRLSVVNQKTEDKSVTKESQ 500
Query: 61 GAVIRLHSMKRECGIDKLIPLQAFKEPSNGYLVDDSCVFGAEIFVIKPTGKGEALS---- 116
R ++ G + + L + + +G+LV D+ +F AE+ ++K T + +
Sbjct: 501 N---RYSKAAKDWGWREFVTLTSLFDQDSGFLVQDTVIFSAEVLILKETSIMQDFTEHDS 557
Query: 117 ------IVKVPAQAGNILRWKIPNFSDLRD----PEYYSSEFNAGGRE 154
+ + WK+ NF ++ + +S F AGG E
Sbjct: 558 ESNSSSSLLDSTGKRSSFTWKVENFLSFKEIMETRKIFSKFFQAGGCE 605
Score = 35.8 bits (81), Expect = 6.7, Method: Compositional matrix adjust.
Identities = 28/108 (25%), Positives = 52/108 (48%), Gaps = 7/108 (6%)
Query: 1 RLILYPNGNKKGQGTGHISLYLALDESTYFPNNPWEVFVNFTF-FVQDRIKNEYLAIRYD 59
RL++YP G+ + G+IS+YL + + ++ W+ F ++ FV + ++ I D
Sbjct: 97 RLLIYPKGDSQAL-PGYISVYLKIMDPRGTSSSKWDCFASYRLAFVN--VVDDSKTIHRD 153
Query: 60 DGAVIRLHSMKRECGIDKLIPLQAFKEPSNGYLV-DDSCVFGAEIFVI 106
R + K+ G P +P GYL +DS + A+I ++
Sbjct: 154 SWH--RFSTKKQSHGWCDFTPASTIFDPKLGYLFNNDSVLITADILIL 199
>gi|3335352|gb|AAC27154.1| Contains similarity to serine/threonine kinase homolog PRO25
gb|L04999 from A. thaliana. EST gb|Z17531 comes from
this gene [Arabidopsis thaliana]
Length = 585
Score = 45.8 bits (107), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 31/110 (28%), Positives = 50/110 (45%), Gaps = 10/110 (9%)
Query: 48 RIKNEYLAIRYDDGAVIRLHSMKRECGIDKLIPLQAFKEPSNGYLVD-DSCVFGAEIFVI 106
R+ L++ + V R S K G+ K + L+ F +P+ G++V+ + C FGA + +
Sbjct: 44 RMLKSLLSLFFSHVEVKRFSSSKTVWGLPKAMSLETFTDPAKGFIVEGEPCEFGAHVKIA 103
Query: 107 K-PTGKGEALSIVKVPAQAGNILRWKIPNFSDLRDPEYYSSEFNAGGREW 155
P E L K W I +FS L+ + S F GG+ W
Sbjct: 104 SSPVPVDENLPFHK--------FSWSIRDFSVLKQNDCISKTFAMGGKNW 145
>gi|302803360|ref|XP_002983433.1| hypothetical protein SELMODRAFT_180190 [Selaginella moellendorffii]
gi|300148676|gb|EFJ15334.1| hypothetical protein SELMODRAFT_180190 [Selaginella moellendorffii]
Length = 1593
Score = 45.4 bits (106), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 42/165 (25%), Positives = 77/165 (46%), Gaps = 19/165 (11%)
Query: 1 RLILYPNGNKKGQGTGHISLYLALDESTYFPNNPWEVFVNFTFFVQDRIKNEYLAIRYDD 60
RLI+YP G + Q H+S++L + +S + W FV+ V + + E I+
Sbjct: 398 RLIVYPRG--QSQPPCHLSMFLEVTDSRN-SSADWSCFVSHRLSVVNH-REERSVIKESQ 453
Query: 61 GAVIRLHSMKRECGIDKLIPLQAFKEPSNGYLVDDSCVFGAEIFVIK------PTGKGEA 114
R ++ G + I L + +G+LV D F AE+ ++K P +G++
Sbjct: 454 N---RYCKAAKDWGWREFITLTNLFDQDSGFLVQDMVTFSAEVLILKETSMITPDCEGKS 510
Query: 115 -LSIVKVPAQAGNILRWKIPNFSDLRD----PEYYSSEFNAGGRE 154
++ ++ A G + W++ NF ++ + +S F AGG E
Sbjct: 511 GVNGMECGANQG-MFTWRVENFLAFKEIMETRKIFSKFFQAGGCE 554
Score = 41.6 bits (96), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 27/76 (35%), Positives = 36/76 (47%), Gaps = 14/76 (18%)
Query: 74 GIDKLIPLQAFKEPSNGYLVDDSCVFGAEIFVIKPTGKGEALSIVKVPAQAGNILR---- 129
G + + + F P GYLVDDS F A VIK E+ S VK P ++ +
Sbjct: 303 GWNDYMKISDFMAPEMGYLVDDSATFTASFHVIK-----ESSSFVKTPIGNRSVRKSDGY 357
Query: 130 -----WKIPNFSDLRD 140
WKI NF+ L+D
Sbjct: 358 QGKFLWKIENFTKLKD 373
>gi|326498761|dbj|BAK02366.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 790
Score = 45.1 bits (105), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 25/96 (26%), Positives = 49/96 (51%), Gaps = 8/96 (8%)
Query: 1 RLILYPNGNKKGQGTGHISLYLALDESTYFPNNPWEVFVNFTFFVQDRIKNEYLAIRYDD 60
R++++P GN H+S+YL + +S P W + F+ + ++I +Y A +
Sbjct: 86 RVLIFPKGN----NVDHLSMYLDVADSGNLPYG-WSRYAQFSLAIVNQIHQKYTARK--- 137
Query: 61 GAVIRLHSMKRECGIDKLIPLQAFKEPSNGYLVDDS 96
+ ++ + + G +PL +PS GYLV+D+
Sbjct: 138 DTQHQFNARESDWGFTSFMPLSELYDPSRGYLVNDT 173
>gi|302784570|ref|XP_002974057.1| hypothetical protein SELMODRAFT_173767 [Selaginella moellendorffii]
gi|300158389|gb|EFJ25012.1| hypothetical protein SELMODRAFT_173767 [Selaginella moellendorffii]
Length = 1590
Score = 45.1 bits (105), Expect = 0.009, Method: Composition-based stats.
Identities = 42/165 (25%), Positives = 77/165 (46%), Gaps = 19/165 (11%)
Query: 1 RLILYPNGNKKGQGTGHISLYLALDESTYFPNNPWEVFVNFTFFVQDRIKNEYLAIRYDD 60
RLI+YP G + Q H+S++L + +S + W FV+ V + + E I+
Sbjct: 398 RLIVYPRG--QSQPPCHLSMFLEVTDSRN-SSADWSCFVSHRLSVVNH-REERSVIKESQ 453
Query: 61 GAVIRLHSMKRECGIDKLIPLQAFKEPSNGYLVDDSCVFGAEIFVIK------PTGKGEA 114
R ++ G + I L + +G+LV D F AE+ ++K P +G++
Sbjct: 454 N---RYCKAAKDWGWREFITLTNLFDQDSGFLVQDMVTFSAEVLILKETSMITPDCEGKS 510
Query: 115 -LSIVKVPAQAGNILRWKIPNFSDLRD----PEYYSSEFNAGGRE 154
++ ++ A G + W++ NF ++ + +S F AGG E
Sbjct: 511 GVNGMECGANQG-MFTWRVENFLAFKEIMETRKIFSKFFQAGGCE 554
Score = 43.9 bits (102), Expect = 0.025, Method: Composition-based stats.
Identities = 27/76 (35%), Positives = 36/76 (47%), Gaps = 14/76 (18%)
Query: 74 GIDKLIPLQAFKEPSNGYLVDDSCVFGAEIFVIKPTGKGEALSIVKVPAQAGNILR---- 129
G + + + F P GYLVDDS F A VIK E+ S VK P ++ +
Sbjct: 303 GWNDYMKISDFMAPEMGYLVDDSATFTASFHVIK-----ESSSFVKTPIGNRSVRKSDGY 357
Query: 130 -----WKIPNFSDLRD 140
WKI NF+ L+D
Sbjct: 358 QGKFLWKIENFTKLKD 373
>gi|384244735|gb|EIE18233.1| hypothetical protein COCSUDRAFT_68353 [Coccomyxa subellipsoidea
C-169]
Length = 2210
Score = 45.1 bits (105), Expect = 0.010, Method: Composition-based stats.
Identities = 35/161 (21%), Positives = 69/161 (42%), Gaps = 29/161 (18%)
Query: 1 RLILYPNGNKKGQGTGHISLYLALDESTYFPNNPWEVFVNFTFFVQDRIKNEYLAIRYDD 60
RLI+YP G + Q H+S++L + + + W FV+ + ++ ++
Sbjct: 423 RLIVYPRG--QSQPPRHLSMFLEVSDKEATAD--WSCFVSHRLVIVNQRDETRSLVKESQ 478
Query: 61 GAVIRLHSMKRECGIDKLIPLQAFKEPSNGYLVDDSCVFGAEIFVIKPTGKGE------- 113
R ++ G + + L + GYL +D CVF AE+ +++ + + +
Sbjct: 479 N---RYMKAAKDWGWREFVTLHTLFDADAGYLQNDDCVFAAEVLMLRESSEAKQVPVEDM 535
Query: 114 -----ALSIVKVPAQA--------GNILR--WKIPNFSDLR 139
AL++ PA+ G +R W++ NF+ R
Sbjct: 536 MMGVTALALPPPPAEVAVDESTVRGTKVRFTWRLDNFAAFR 576
Score = 40.8 bits (94), Expect = 0.19, Method: Composition-based stats.
Identities = 34/157 (21%), Positives = 64/157 (40%), Gaps = 29/157 (18%)
Query: 1 RLILYPNGNKKGQGTGHISLYLALDESTYFPNNPWEVFVNFTFFVQDRIKNEYLAIRYDD 60
RL++YP G+ + G++S YL L + T +N W+ F ++ V +++ N+ D
Sbjct: 64 RLLVYPFGDTQAL-PGYVSFYLQLQDPTTAASNRWDCFASYKLSVLNQVSNDL------D 116
Query: 61 GAVIRLHSMKRECGIDKLIPLQA-------------FKEPSNGYLVDDSCVFGAEIFVIK 107
+ H + PL + ++P G+LV+ A + V++
Sbjct: 117 LSRESWHRFSSRPARQQTRPLSSSSHGWADFASAAQIQDPKAGFLVNGFVTVSATVLVLE 176
Query: 108 PTGK----GEALSIVKVPAQAGNILRWKIPNFSDLRD 140
T + G++ S W++ NF RD
Sbjct: 177 ETVQLTRDGDSSS-----DNLSGKFTWRVKNFELFRD 208
>gi|224135117|ref|XP_002327570.1| predicted protein [Populus trichocarpa]
gi|222836124|gb|EEE74545.1| predicted protein [Populus trichocarpa]
Length = 84
Score = 45.1 bits (105), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 19/46 (41%), Positives = 28/46 (60%)
Query: 65 RLHSMKRECGIDKLIPLQAFKEPSNGYLVDDSCVFGAEIFVIKPTG 110
R K E G + + AF++PSNG+LV+D C+F E+F IK +
Sbjct: 15 RFPKTKMEWGFIESLSHDAFRDPSNGFLVNDLCIFAVEVFAIKSSA 60
>gi|195608050|gb|ACG25855.1| hypothetical protein [Zea mays]
gi|414886746|tpg|DAA62760.1| TPA: hypothetical protein ZEAMMB73_943507 [Zea mays]
gi|414886747|tpg|DAA62761.1| TPA: hypothetical protein ZEAMMB73_943507 [Zea mays]
gi|414886748|tpg|DAA62762.1| TPA: hypothetical protein ZEAMMB73_943507 [Zea mays]
Length = 215
Score = 45.1 bits (105), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 27/82 (32%), Positives = 45/82 (54%), Gaps = 6/82 (7%)
Query: 78 LIPLQAFKEPSNGYLVDDSCVFGA---EIFVIKPTGKGEALSIVKVPA-QAGNILRWKIP 133
++PL+A ++ S ++V++SCVFG ++ IK E L + K+ + WKI
Sbjct: 31 MLPLKALRQSSR-FIVNNSCVFGIGFIKVATIKVNTTLETLFVRKMNIFNEAKVYTWKIE 89
Query: 134 NFSDLRDPEYYSSEFNAGGREW 155
+FS L++P +S EF G W
Sbjct: 90 DFSALKNPS-HSPEFEIAGYTW 110
>gi|357142844|ref|XP_003572713.1| PREDICTED: uncharacterized protein LOC100836358 [Brachypodium
distachyon]
Length = 1667
Score = 45.1 bits (105), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 43/175 (24%), Positives = 72/175 (41%), Gaps = 32/175 (18%)
Query: 1 RLILYPNGNKKGQGTGHISLYLALDESTYFPNNP---WEVFVNFTFFVQDRIKNEYLAIR 57
RLI+YP G + Q H+S++L + + P N W FV+ V ++ E ++
Sbjct: 428 RLIVYPRG--QSQPPCHLSVFLEVTD----PRNTTGEWTCFVSHRLSVINQKVEEKSIVK 481
Query: 58 YDDGAVIRLHSMKRECGIDKLIPLQAFKEPSNGYLVDDSCVFGAEIFVIKPTGKGEALS- 116
R ++ G + + L + + G+LV D+ VF AE+ ++K T + S
Sbjct: 482 ESQN---RYSKSAKDWGWREFLTLTSLFDQDAGFLVQDTVVFSAEVLILKETVTMQEFSD 538
Query: 117 -------------IVKVPAQAGNILRWKIPNFSDLRD----PEYYSSEFNAGGRE 154
I +P WK+ NF +D + +S F AG E
Sbjct: 539 EDSEICSSSSGYQIDTLPKHPS--FTWKVENFLSFKDIMETRKIFSKYFQAGDCE 591
>gi|115488612|ref|NP_001066793.1| Os12g0489100 [Oryza sativa Japonica Group]
gi|113649300|dbj|BAF29812.1| Os12g0489100, partial [Oryza sativa Japonica Group]
Length = 551
Score = 44.7 bits (104), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 28/96 (29%), Positives = 49/96 (51%), Gaps = 8/96 (8%)
Query: 1 RLILYPNGNKKGQGTGHISLYLALDESTYFPNNPWEVFVNFTFFVQDRIKNEYLAIRYDD 60
R++++P GN H S+YL + +S P W + F+ V ++I +Y IR D
Sbjct: 93 RVLIFPKGN----NVDHFSMYLDVADSVNLPYG-WNRYAQFSLAVVNQIHPKY-TIRKDT 146
Query: 61 GAVIRLHSMKRECGIDKLIPLQAFKEPSNGYLVDDS 96
+ ++ + + G +PL +PS GYLV+D+
Sbjct: 147 QH--QFNARESDWGFTSFMPLSDLYDPSRGYLVNDT 180
>gi|108862691|gb|ABA98280.2| ubiquitin-specific protease 12, putative, expressed [Oryza sativa
Japonica Group]
Length = 1125
Score = 44.3 bits (103), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 28/96 (29%), Positives = 49/96 (51%), Gaps = 8/96 (8%)
Query: 1 RLILYPNGNKKGQGTGHISLYLALDESTYFPNNPWEVFVNFTFFVQDRIKNEYLAIRYDD 60
R++++P GN H S+YL + +S P W + F+ V ++I +Y IR D
Sbjct: 93 RVLIFPKGN----NVDHFSMYLDVADSVNLPYG-WNRYAQFSLAVVNQIHPKY-TIRKDT 146
Query: 61 GAVIRLHSMKRECGIDKLIPLQAFKEPSNGYLVDDS 96
+ ++ + + G +PL +PS GYLV+D+
Sbjct: 147 QH--QFNARESDWGFTSFMPLSDLYDPSRGYLVNDT 180
>gi|222617095|gb|EEE53227.1| hypothetical protein OsJ_36127 [Oryza sativa Japonica Group]
Length = 1077
Score = 44.3 bits (103), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 28/96 (29%), Positives = 49/96 (51%), Gaps = 8/96 (8%)
Query: 1 RLILYPNGNKKGQGTGHISLYLALDESTYFPNNPWEVFVNFTFFVQDRIKNEYLAIRYDD 60
R++++P GN H S+YL + +S P W + F+ V ++I +Y IR D
Sbjct: 75 RVLIFPKGN----NVDHFSMYLDVADSVNLPYG-WNRYAQFSLAVVNQIHPKY-TIRKDT 128
Query: 61 GAVIRLHSMKRECGIDKLIPLQAFKEPSNGYLVDDS 96
+ ++ + + G +PL +PS GYLV+D+
Sbjct: 129 QH--QFNARESDWGFTSFMPLSDLYDPSRGYLVNDT 162
>gi|302796125|ref|XP_002979825.1| hypothetical protein SELMODRAFT_444302 [Selaginella moellendorffii]
gi|300152585|gb|EFJ19227.1| hypothetical protein SELMODRAFT_444302 [Selaginella moellendorffii]
Length = 1105
Score = 44.3 bits (103), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 29/107 (27%), Positives = 54/107 (50%), Gaps = 8/107 (7%)
Query: 1 RLILYPNGNKKGQGTGHISLYLALDESTYFPNNPWEVFVNFTFFVQDRIKNEYLAIRYDD 60
R++++P GN H+S+YL + +S P W F F+ V ++ + + L++R D
Sbjct: 75 RILVFPKGN----NVDHLSIYLDVADSATLPYG-WTRFAQFSLAVINQFEQK-LSMRKDT 128
Query: 61 GAVIRLHSMKRECGIDKLIPLQAFKEPSNGYLVDDSCVFGAEIFVIK 107
+ +S + + G + L + S GYLV+D+ A++ V K
Sbjct: 129 QH--QFNSRESDWGFTSFMSLHELYDSSRGYLVNDTVCIEADVNVRK 173
>gi|218186873|gb|EEC69300.1| hypothetical protein OsI_38365 [Oryza sativa Indica Group]
Length = 1076
Score = 44.3 bits (103), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 28/96 (29%), Positives = 49/96 (51%), Gaps = 8/96 (8%)
Query: 1 RLILYPNGNKKGQGTGHISLYLALDESTYFPNNPWEVFVNFTFFVQDRIKNEYLAIRYDD 60
R++++P GN H S+YL + +S P W + F+ V ++I +Y IR D
Sbjct: 76 RVLIFPKGN----NVDHFSMYLDVADSVNLPYG-WNRYAQFSLAVVNQIHPKY-TIRKDT 129
Query: 61 GAVIRLHSMKRECGIDKLIPLQAFKEPSNGYLVDDS 96
+ ++ + + G +PL +PS GYLV+D+
Sbjct: 130 QH--QFNARESDWGFTSFMPLSDLYDPSRGYLVNDT 163
>gi|302807557|ref|XP_002985473.1| hypothetical protein SELMODRAFT_446288 [Selaginella moellendorffii]
gi|300146936|gb|EFJ13603.1| hypothetical protein SELMODRAFT_446288 [Selaginella moellendorffii]
Length = 1080
Score = 44.3 bits (103), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 29/107 (27%), Positives = 54/107 (50%), Gaps = 8/107 (7%)
Query: 1 RLILYPNGNKKGQGTGHISLYLALDESTYFPNNPWEVFVNFTFFVQDRIKNEYLAIRYDD 60
R++++P GN H+S+YL + +S P W F F+ V ++ + + L++R D
Sbjct: 75 RILVFPKGN----NVDHLSIYLDVADSATLPYG-WTRFAQFSLAVINQFEQK-LSMRKDT 128
Query: 61 GAVIRLHSMKRECGIDKLIPLQAFKEPSNGYLVDDSCVFGAEIFVIK 107
+ +S + + G + L + S GYLV+D+ A++ V K
Sbjct: 129 QH--QFNSRESDWGFTSFMSLHELYDSSRGYLVNDTVCIEADVNVRK 173
>gi|297826735|ref|XP_002881250.1| hypothetical protein ARALYDRAFT_902353 [Arabidopsis lyrata subsp.
lyrata]
gi|297327089|gb|EFH57509.1| hypothetical protein ARALYDRAFT_902353 [Arabidopsis lyrata subsp.
lyrata]
Length = 307
Score = 44.3 bits (103), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 30/92 (32%), Positives = 41/92 (44%), Gaps = 14/92 (15%)
Query: 74 GIDKLIPLQAFKEPSNGYLVDDSCVFGAEIFVIKP----------TGKGEALSIVKVPAQ 123
G+D I KE +LV+D VF AEI ++P G E +++V A+
Sbjct: 115 GLDNFILYTVLKER---FLVNDKAVFYAEISDVQPNFPVTGITPTMGIAERFKLIEV-AR 170
Query: 124 AGNILRWKIPNFSDLRDPEYYSSEFNAGGREW 155
+ WKI FS E+ S EF G R W
Sbjct: 171 KNSRFTWKITKFSSFTGVEHSSDEFTVGPRRW 202
Score = 40.0 bits (92), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 33/110 (30%), Positives = 48/110 (43%), Gaps = 9/110 (8%)
Query: 1 RLILYPNGNKKGQGTGHISLYLALDESTYFPNNPWEV-FVNFTFFVQDRIKNEYLAIRYD 59
RL +YP G G+G SLYL S Y ++P V + V D++ + I
Sbjct: 203 RLSMYPEGFGDGKGNS-FSLYLI--ASDYVTDDPKGVTLAVYKLRVLDQLHRNHYEINCQ 259
Query: 60 DGAVIRLHSMKRECGIDKLIPLQAFKEPSNGYLVDDSCVFGAEIFVIKPT 109
D LH G K +PL+ + S G+LV+D G E ++ T
Sbjct: 260 DWF---LHLTT--SGRHKFLPLEELHKASRGFLVNDQIYIGVEFLIVSTT 304
>gi|357439335|ref|XP_003589944.1| Ubiquitin carboxyl-terminal hydrolase family protein [Medicago
truncatula]
gi|357439433|ref|XP_003589993.1| Ubiquitin carboxyl-terminal hydrolase family protein [Medicago
truncatula]
gi|355478992|gb|AES60195.1| Ubiquitin carboxyl-terminal hydrolase family protein [Medicago
truncatula]
gi|355479041|gb|AES60244.1| Ubiquitin carboxyl-terminal hydrolase family protein [Medicago
truncatula]
Length = 309
Score = 43.9 bits (102), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 27/123 (21%), Positives = 56/123 (45%), Gaps = 6/123 (4%)
Query: 1 RLILYPNGNKKGQGTGHISLYLALDESTYFPNNPWEVFVNFTFFVQDRIKNEYLAIRYDD 60
R+ L+P G+ + ++L ++ W+ F F V +++++ +
Sbjct: 42 RIALFPKGS--SSAVDQLGIFLEAMKTANMSEG-WKRDAKFKFAVFNQVEDNRTITKETS 98
Query: 61 GAVIRLHSMKRECGIDKLIPLQAFKEPSNGYLVDDSCVFGAEIFVIKPTGKGEALSIVKV 120
+ + E G + L A ++P G++V+D+C+ GAEIFV K + + VK+
Sbjct: 99 Q---EFSASEDEWGYFSFMTLAALRDPGRGFIVNDTCIVGAEIFVCKSAHEKQINQTVKM 155
Query: 121 PAQ 123
+
Sbjct: 156 EVE 158
>gi|190358578|ref|NP_001121853.1| TNF receptor-associated factor 1 [Danio rerio]
Length = 551
Score = 43.9 bits (102), Expect = 0.021, Method: Composition-based stats.
Identities = 31/101 (30%), Positives = 48/101 (47%), Gaps = 8/101 (7%)
Query: 2 LILYPNGNKKGQGTGHISLYLALDESTYFPNNPWEVFVNFTFFVQDRIKNEYL--AIRYD 59
L LY NG+ G+G+ HISL+ + + Y P W TFF+ D+ + E++ A R
Sbjct: 442 LRLYLNGDGAGKGS-HISLFFVIMKGEYDPILSWPFKHKVTFFLLDQNQREHVIDAFR-P 499
Query: 60 DGAVIRLHS----MKRECGIDKLIPLQAFKEPSNGYLVDDS 96
D + + H M G PL+ + P + Y DD+
Sbjct: 500 DLSSMSFHQPVSDMNVASGCPLFFPLKKLRSPKHAYCKDDT 540
>gi|357439337|ref|XP_003589945.1| Ubiquitin carboxyl-terminal hydrolase family protein [Medicago
truncatula]
gi|355478993|gb|AES60196.1| Ubiquitin carboxyl-terminal hydrolase family protein [Medicago
truncatula]
Length = 394
Score = 43.9 bits (102), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 27/123 (21%), Positives = 56/123 (45%), Gaps = 6/123 (4%)
Query: 1 RLILYPNGNKKGQGTGHISLYLALDESTYFPNNPWEVFVNFTFFVQDRIKNEYLAIRYDD 60
R+ L+P G+ + ++L ++ W+ F F V +++++ +
Sbjct: 127 RIALFPKGS--SSAVDQLGIFLEAMKTANMSEG-WKRDAKFKFAVFNQVEDNRTITKETS 183
Query: 61 GAVIRLHSMKRECGIDKLIPLQAFKEPSNGYLVDDSCVFGAEIFVIKPTGKGEALSIVKV 120
+ + E G + L A ++P G++V+D+C+ GAEIFV K + + VK+
Sbjct: 184 Q---EFSASEDEWGYFSFMTLAALRDPGRGFIVNDTCIVGAEIFVCKSAHEKQINQTVKM 240
Query: 121 PAQ 123
+
Sbjct: 241 EVE 243
>gi|242083452|ref|XP_002442151.1| hypothetical protein SORBIDRAFT_08g015020 [Sorghum bicolor]
gi|241942844|gb|EES15989.1| hypothetical protein SORBIDRAFT_08g015020 [Sorghum bicolor]
Length = 1122
Score = 43.9 bits (102), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 28/96 (29%), Positives = 49/96 (51%), Gaps = 8/96 (8%)
Query: 1 RLILYPNGNKKGQGTGHISLYLALDESTYFPNNPWEVFVNFTFFVQDRIKNEYLAIRYDD 60
R++++P GN H S+YL + +S P W + F+ V ++I +Y IR D
Sbjct: 90 RVLIFPKGN----NVDHFSMYLDVADSGNLPYG-WSRYAQFSLAVVNQIHPKY-TIRKDT 143
Query: 61 GAVIRLHSMKRECGIDKLIPLQAFKEPSNGYLVDDS 96
+ ++ + + G +PL +PS GYLV+D+
Sbjct: 144 QH--QFNARESDWGFTSFMPLSDLYDPSRGYLVNDT 177
>gi|14209584|dbj|BAB56080.1| putative ubiquitin carboxyl-terminal hydrolase 7 [Oryza sativa
Japonica Group]
gi|56785209|dbj|BAD82061.1| putative ubiquitin carboxyl-terminal hydrolase 7 [Oryza sativa
Japonica Group]
Length = 1108
Score = 43.5 bits (101), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 26/107 (24%), Positives = 56/107 (52%), Gaps = 8/107 (7%)
Query: 1 RLILYPNGNKKGQGTGHISLYLALDESTYFPNNPWEVFVNFTFFVQDRIKNEYLAIRYDD 60
R++++P GN +S+YL + ++ P+ W + F+ V +++ ++Y ++R +
Sbjct: 79 RVLVFPTGN----SVQSLSMYLDIADANEQPHG-WSKYAQFSLAVINQLDSKY-SLRKE- 131
Query: 61 GAVIRLHSMKRECGIDKLIPLQAFKEPSNGYLVDDSCVFGAEIFVIK 107
A + + + G + L +P+ GY+V+D C+ AE+ V K
Sbjct: 132 -AAHHFSTRESDWGFTSFMHLGDLYDPTKGYIVNDKCIIEAEVAVRK 177
>gi|218189127|gb|EEC71554.1| hypothetical protein OsI_03906 [Oryza sativa Indica Group]
Length = 1075
Score = 43.5 bits (101), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 26/107 (24%), Positives = 56/107 (52%), Gaps = 8/107 (7%)
Query: 1 RLILYPNGNKKGQGTGHISLYLALDESTYFPNNPWEVFVNFTFFVQDRIKNEYLAIRYDD 60
R++++P GN +S+YL + ++ P+ W + F+ V +++ ++Y ++R +
Sbjct: 79 RVLVFPTGN----SVQSLSMYLDIADANEQPHG-WSKYAQFSLAVINQLDSKY-SLRKE- 131
Query: 61 GAVIRLHSMKRECGIDKLIPLQAFKEPSNGYLVDDSCVFGAEIFVIK 107
A + + + G + L +P+ GY+V+D C+ AE+ V K
Sbjct: 132 -AAHHFSTRESDWGFTSFMHLGDLYDPTKGYIVNDKCIIEAEVAVRK 177
>gi|168035595|ref|XP_001770295.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162678512|gb|EDQ64970.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 1123
Score = 43.5 bits (101), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 32/109 (29%), Positives = 54/109 (49%), Gaps = 12/109 (11%)
Query: 1 RLILYPNGNKKGQGTGHISLYLALDESTYFPNNPWEVFVNFTFFVQDRIKNEYLAIRYDD 60
R++L+P GN H+S+YL + +S P W F +FT V + + L ++ D
Sbjct: 81 RVLLFPKGN----NVDHLSVYLDVADSAQLPYG-WSRFAHFTLAVVNPY-DPKLTVKKD- 133
Query: 61 GAVIRLHSMKREC--GIDKLIPLQAFKEPSNGYLVDDSCVFGAEIFVIK 107
+ H RE G +PL +PS G+L++D+ + A++ V K
Sbjct: 134 ---TQHHFNVRESDWGFTSFMPLPDLYDPSRGFLMNDTLIVEADVNVRK 179
>gi|222619321|gb|EEE55453.1| hypothetical protein OsJ_03614 [Oryza sativa Japonica Group]
Length = 1075
Score = 43.5 bits (101), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 26/107 (24%), Positives = 56/107 (52%), Gaps = 8/107 (7%)
Query: 1 RLILYPNGNKKGQGTGHISLYLALDESTYFPNNPWEVFVNFTFFVQDRIKNEYLAIRYDD 60
R++++P GN +S+YL + ++ P+ W + F+ V +++ ++Y ++R +
Sbjct: 79 RVLVFPTGN----SVQSLSMYLDIADANEQPHG-WSKYAQFSLAVINQLDSKY-SLRKE- 131
Query: 61 GAVIRLHSMKRECGIDKLIPLQAFKEPSNGYLVDDSCVFGAEIFVIK 107
A + + + G + L +P+ GY+V+D C+ AE+ V K
Sbjct: 132 -AAHHFSTRESDWGFTSFMHLGDLYDPTKGYIVNDKCIIEAEVAVRK 177
>gi|297792575|ref|XP_002864172.1| hypothetical protein ARALYDRAFT_918288 [Arabidopsis lyrata subsp.
lyrata]
gi|297310007|gb|EFH40431.1| hypothetical protein ARALYDRAFT_918288 [Arabidopsis lyrata subsp.
lyrata]
Length = 287
Score = 43.5 bits (101), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 28/104 (26%), Positives = 45/104 (43%), Gaps = 28/104 (26%)
Query: 12 GQGTGHISLYLALDESTYFPNNPWEVFVNFTFFVQDRIKNEYLAIRYDDGAVIRLHSMKR 71
G G IS+Y+ +D ++ EVF FFV ++ + +Y I
Sbjct: 76 GHNCGFISMYVEIDSTS-------EVFAYVKFFVYNKNEQKYFTI--------------- 113
Query: 72 ECGIDKLIPLQAFKEPSNGYLVD-DSCVFGAEIFVIKPTGKGEA 114
+++PL F+ P NGY+ + C FG E+ V+ P E
Sbjct: 114 -----QVLPLYLFEIPKNGYIFEGQKCEFGVEVMVVPPLTNWEV 152
>gi|168032240|ref|XP_001768627.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162680126|gb|EDQ66565.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 1098
Score = 42.4 bits (98), Expect = 0.064, Method: Compositional matrix adjust.
Identities = 27/103 (26%), Positives = 55/103 (53%), Gaps = 8/103 (7%)
Query: 1 RLILYPNGNKKGQGTGHISLYLALDESTYFPNNPWEVFVNFTFFVQDRIKNEYLAIRYDD 60
R++L+P GN Q +S+YL + +S P+ W F +F V ++ + + +++R D
Sbjct: 65 RVLLFPRGNNVDQ----LSIYLDVADSNQLPSG-WTRFAHFNLAVLNQYEPK-MSVRKDT 118
Query: 61 GAVIRLHSMKRECGIDKLIPLQAFKEPSNGYLVDDSCVFGAEI 103
+ ++ + + G +PL + S G+LV+D+ V A++
Sbjct: 119 QH--QFNARESDWGFTSFMPLHELYDLSKGFLVNDTLVIEADV 159
>gi|242071441|ref|XP_002450997.1| hypothetical protein SORBIDRAFT_05g022390 [Sorghum bicolor]
gi|241936840|gb|EES09985.1| hypothetical protein SORBIDRAFT_05g022390 [Sorghum bicolor]
Length = 1118
Score = 42.4 bits (98), Expect = 0.069, Method: Compositional matrix adjust.
Identities = 27/96 (28%), Positives = 49/96 (51%), Gaps = 8/96 (8%)
Query: 1 RLILYPNGNKKGQGTGHISLYLALDESTYFPNNPWEVFVNFTFFVQDRIKNEYLAIRYDD 60
R++++P GN H S+YL + +S P W + F+ V ++I+ +Y IR D
Sbjct: 87 RVLIFPKGN----NVDHFSMYLDVADSANLPYG-WSRYAQFSLAVVNQIQPKY-TIRKDT 140
Query: 61 GAVIRLHSMKRECGIDKLIPLQAFKEPSNGYLVDDS 96
+ ++ + + G +PL + S GYLV+D+
Sbjct: 141 QH--QFNARESDWGFTSFMPLSDLYDASRGYLVNDT 174
>gi|297810023|ref|XP_002872895.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297318732|gb|EFH49154.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
Length = 283
Score = 42.0 bits (97), Expect = 0.084, Method: Compositional matrix adjust.
Identities = 41/157 (26%), Positives = 71/157 (45%), Gaps = 24/157 (15%)
Query: 2 LILYPNGNKKGQGTGHISLYLALDESTYFPNNPWEVFVNFTFFVQDRIKNEYLAIRYDDG 61
L +YPNG+K +GT H+S++L S V + + FV +++ ++ + D
Sbjct: 45 LSVYPNGHKSAKGT-HVSIFLMNQVSV-------NVLLTYKLFVVSQLERKWHSKSKDQF 96
Query: 62 AVIRLHSMKRECGIDKLIPLQAFKEPSNGYLVDDSCVFGAEIFVIKPT--GKGEALSIVK 119
S + G + I L K NGYL+ G + + I+P G E S+++
Sbjct: 97 DTNPEPSTE---GFYEFITLADLKR--NGYLI------GVKFYEIEPANPGTAECFSLIE 145
Query: 120 VPAQAGNILRWKIPNFSDLRDPEYY-SSEFNAGGREW 155
P + + W + FS + + S+EF G R+W
Sbjct: 146 KP--LNHKVTWMMSKFSSFNPGKVHQSNEFVVGTRKW 180
>gi|297826733|ref|XP_002881249.1| hypothetical protein ARALYDRAFT_482229 [Arabidopsis lyrata subsp.
lyrata]
gi|297327088|gb|EFH57508.1| hypothetical protein ARALYDRAFT_482229 [Arabidopsis lyrata subsp.
lyrata]
Length = 313
Score = 42.0 bits (97), Expect = 0.085, Method: Compositional matrix adjust.
Identities = 39/153 (25%), Positives = 59/153 (38%), Gaps = 28/153 (18%)
Query: 17 HISLYLALDESTYFPNNPWEVFVNFTFFVQDRIKNEYLAIRYDDGAVIRLHSMKRECGID 76
H+S L + + +N WEV NF + + +Y + V + +R G+
Sbjct: 64 HLSFVLEITDEKCTGSN-WEVKFNFKIGIVPQTGPDYCFV-----LVGHQNEKQRSQGLA 117
Query: 77 KLIPLQAFKEPSNGYLVDDSCVFGAEIFVIKPTGKGEALSIVKVPAQAGNILR------- 129
I + KE +LV+D F AEI ++P + ++P G R
Sbjct: 118 NFISHKDLKER---FLVNDKAGFYAEISDVQPN-----FPVTRIPRTMGTAERFKLIEFS 169
Query: 130 -------WKIPNFSDLRDPEYYSSEFNAGGREW 155
WKI FS E+ S EF G R W
Sbjct: 170 PRNSRFTWKITQFSSFDGEEHSSYEFTVGPRRW 202
>gi|326923377|ref|XP_003207913.1| PREDICTED: TNF receptor-associated factor 1-like [Meleagris
gallopavo]
Length = 424
Score = 42.0 bits (97), Expect = 0.095, Method: Compositional matrix adjust.
Identities = 29/100 (29%), Positives = 46/100 (46%), Gaps = 6/100 (6%)
Query: 2 LILYPNGNKKGQGTGHISLYLALDESTYFPNNPWEVFVNFTFFVQDRIKNEYL--AIRYD 59
L +Y NG+ G+GT HISLY + + Y PW TF + D+ E++ R D
Sbjct: 316 LRIYLNGDGMGKGT-HISLYFVVMKGDYDALLPWPFRHKVTFMLLDQNNREHIIDVFRPD 374
Query: 60 DGAVI---RLHSMKRECGIDKLIPLQAFKEPSNGYLVDDS 96
+ +H M G +PL + P + Y+ +D+
Sbjct: 375 LASASFQRPVHDMNVASGCPTFLPLTKLQSPKHAYVKEDT 414
>gi|118098682|ref|XP_415229.2| PREDICTED: ATP-dependent RNA helicase DDX51 [Gallus gallus]
Length = 764
Score = 41.6 bits (96), Expect = 0.11, Method: Composition-based stats.
Identities = 29/81 (35%), Positives = 37/81 (45%), Gaps = 6/81 (7%)
Query: 44 FVQDRIKNEYLAIRYDDGAVIRLHSMKRECGIDKLIPLQA------FKEPSNGYLVDDSC 97
VQ RIK + IR G +L + GI+ P+QA + SNGYLV
Sbjct: 282 LVQKRIKENLIPIRDVPGIHPKLLKKLQMNGIESFFPVQAEVIPAVLQSASNGYLVGQGG 341
Query: 98 VFGAEIFVIKPTGKGEALSIV 118
+I V PTG G+ LS V
Sbjct: 342 YRPKDICVSAPTGSGKTLSFV 362
>gi|452822833|gb|EME29849.1| ubiquitin carboxyl-terminal hydrolase 7 [Galdieria sulphuraria]
Length = 1240
Score = 41.6 bits (96), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 29/108 (26%), Positives = 46/108 (42%), Gaps = 5/108 (4%)
Query: 1 RLILYPNGNKKGQGTGHISLYLALDESTYFPNNPW--EVFVNFTFFVQDRIKNEYLAIRY 58
R +++P GN Q H+SLYL W +F F I E +
Sbjct: 95 RFLIFPRGN---QTKTHLSLYLECGGPVQSLQCSWAAHIFSQSAKFNLVCINQEDSSKNI 151
Query: 59 DDGAVIRLHSMKRECGIDKLIPLQAFKEPSNGYLVDDSCVFGAEIFVI 106
A R + + G + I L + P N +LV+DS +FGA++ ++
Sbjct: 152 VKNAEHRFTDNESDWGFKEFIKLDTLQRPENCFLVEDSVIFGAQVTLV 199
>gi|297846534|ref|XP_002891148.1| hypothetical protein ARALYDRAFT_336568 [Arabidopsis lyrata subsp.
lyrata]
gi|297336990|gb|EFH67407.1| hypothetical protein ARALYDRAFT_336568 [Arabidopsis lyrata subsp.
lyrata]
Length = 282
Score = 41.2 bits (95), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 32/120 (26%), Positives = 56/120 (46%), Gaps = 15/120 (12%)
Query: 1 RLILYPNGNKKGQGTGHISLYLALDESTYFPNNPWEVFVNFTFFVQDRI-----KNEYLA 55
RL+ YP GN G SL+LA+ +S PN W+ + + V +++ K E L
Sbjct: 37 RLLAYPKGNGDG-FNKSFSLFLAVADSESLPNG-WKRHIKYRLTVVNQMSEKLSKQEELQ 94
Query: 56 IRYDDGAVIRLHSMKRECGIDKLIPLQAFKEPSNGYLVDDSCVFGAEIFVIKPTGKGEAL 115
+D ++ G ++PL + ++G+LV+ AE+ V++ GK + L
Sbjct: 95 SWFDQNSL--------SWGYPAMLPLTKLVDENDGFLVNGEVKVVAEVGVLEVVGKSDVL 146
>gi|449478439|ref|XP_002187788.2| PREDICTED: TNF receptor-associated factor 1 [Taeniopygia guttata]
Length = 531
Score = 41.2 bits (95), Expect = 0.16, Method: Composition-based stats.
Identities = 29/100 (29%), Positives = 49/100 (49%), Gaps = 6/100 (6%)
Query: 2 LILYPNGNKKGQGTGHISLYLALDESTYFPNNPWEVFVNFTFFVQDRIKNEYL--AIRYD 59
L +Y NG+ G+GT H+SL+ + + Y PW TF + D+ E++ A R D
Sbjct: 423 LRVYLNGDGTGKGT-HMSLFFVVMKGDYDALLPWPFRHKVTFMLLDQNNREHIIDAFRPD 481
Query: 60 --DGAVIR-LHSMKRECGIDKLIPLQAFKEPSNGYLVDDS 96
+ R ++ M G +PL + P +GY+ +D+
Sbjct: 482 LTSASFQRPVNDMNVASGCPMFLPLAKLQSPKHGYVREDT 521
>gi|28207156|gb|AAO37218.1| hypothetical protein [Arabidopsis thaliana]
gi|61742633|gb|AAX55137.1| hypothetical protein At2g32870 [Arabidopsis thaliana]
Length = 157
Score = 40.8 bits (94), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 32/114 (28%), Positives = 51/114 (44%), Gaps = 11/114 (9%)
Query: 1 RLILYPNGNKKGQGTGHISLYLALDESTYFPNNP-WEVFVNFTFFVQDRIKNEYLAIR-- 57
+L++YP GN G+G SL L L S Y N P + V D++ +
Sbjct: 47 KLVMYPKGNGDGKGN---SLSLYLFASDYVTNGPKGGTLAIYKLRVLDQLNRNHCETECR 103
Query: 58 --YDDGAVIRLHSMKRECGIDKLIPLQAFKEPSNGYLVDDSCVFGAEIFVIKPT 109
+ V ++ S+ G K +PL+ + S G+LV+D G EI ++ T
Sbjct: 104 YWFPYNPVNQMDSL---WGRPKFLPLEELHKSSRGFLVNDQIYIGVEISIVSTT 154
>gi|357439339|ref|XP_003589946.1| Ubiquitin carboxyl-terminal hydrolase family protein [Medicago
truncatula]
gi|355478994|gb|AES60197.1| Ubiquitin carboxyl-terminal hydrolase family protein [Medicago
truncatula]
Length = 246
Score = 40.8 bits (94), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 18/52 (34%), Positives = 30/52 (57%)
Query: 72 ECGIDKLIPLQAFKEPSNGYLVDDSCVFGAEIFVIKPTGKGEALSIVKVPAQ 123
E G + L A ++P G++V+D+C+ GAEIFV K + + VK+ +
Sbjct: 44 EWGYFSFMTLAALRDPGRGFIVNDTCIVGAEIFVCKSAHEKQINQTVKMEVE 95
>gi|27311691|gb|AAO00811.1| unknown protein [Arabidopsis thaliana]
Length = 313
Score = 40.8 bits (94), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 32/114 (28%), Positives = 51/114 (44%), Gaps = 11/114 (9%)
Query: 1 RLILYPNGNKKGQGTGHISLYLALDESTYFPNNP-WEVFVNFTFFVQDRIKNEYLAIR-- 57
+L++YP GN G+G SL L L S Y N P + V D++ +
Sbjct: 203 KLVMYPKGNGDGKGN---SLSLYLFASDYVTNGPKGGTLAIYKLRVLDQLNRNHCETECR 259
Query: 58 --YDDGAVIRLHSMKRECGIDKLIPLQAFKEPSNGYLVDDSCVFGAEIFVIKPT 109
+ V ++ S+ G K +PL+ + S G+LV+D G EI ++ T
Sbjct: 260 YWFPYNPVNQMDSL---WGRPKFLPLEELHKSSRGFLVNDQIYIGVEISIVSTT 310
Score = 40.0 bits (92), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 38/153 (24%), Positives = 57/153 (37%), Gaps = 28/153 (18%)
Query: 17 HISLYLALDESTYFPNNPWEVFVNFTFFVQDRIKNEYLAIRYDDGAVIRLHSMKRECGID 76
H+S L + + + W+V NF + + +Y + V + KR G+
Sbjct: 64 HLSFVLEITDEKC-TGSTWDVKFNFKIGIVPQTGPDYCFV-----LVGHQNEKKRSQGLA 117
Query: 77 KLIPLQAFKEPSNGYLVDDSCVFGAEIFVIKPTGKGEALSIVKVPAQAGNILR------- 129
I KE +LV+D F AEI ++P + ++P G R
Sbjct: 118 NFISHTDLKER---FLVNDKAGFYAEISDVQPN-----FPVTRIPRTMGTAERFKLIEFS 169
Query: 130 -------WKIPNFSDLRDPEYYSSEFNAGGREW 155
WKI FS E+ S EF G R W
Sbjct: 170 PKNSRFTWKITQFSSFDGEEHSSYEFTVGPRRW 202
>gi|357494291|ref|XP_003617434.1| Ubiquitin carboxyl-terminal hydrolase family protein [Medicago
truncatula]
gi|355518769|gb|AET00393.1| Ubiquitin carboxyl-terminal hydrolase family protein [Medicago
truncatula]
Length = 520
Score = 40.8 bits (94), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 32/124 (25%), Positives = 55/124 (44%), Gaps = 24/124 (19%)
Query: 1 RLILYPNGNKKGQGTGHISLYLALDESTYFPNNPWEVFVNFTFFVQDRIKNEY------- 53
R++ + GN ++ + L +S P+ W V F+F V ++IK+EY
Sbjct: 102 RVLFFQEGN---NVMDYLHMSLCTADSASLPDG-WSRCVQFSFRVVNQIKDEYNLTKAYW 157
Query: 54 ----------LAIRY---DDGAVIRLHSMKRECGIDKLIPLQAFKEPSNGYLVDDSCVFG 100
L IR D ++ + ++R+ G K IP +PS GYL++D+ V
Sbjct: 158 PDKHTLSVEKLGIRDSNPDPFTQLQFNKLQRDQGFVKFIPHGVLFDPSRGYLLNDTLVVE 217
Query: 101 AEIF 104
E+
Sbjct: 218 VEVL 221
>gi|66814134|ref|XP_641246.1| hypothetical protein DDB_G0280369 [Dictyostelium discoideum AX4]
gi|60469417|gb|EAL67411.1| hypothetical protein DDB_G0280369 [Dictyostelium discoideum AX4]
Length = 1480
Score = 40.4 bits (93), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 36/155 (23%), Positives = 62/155 (40%), Gaps = 16/155 (10%)
Query: 1 RLILYPNGNKKGQGTGHISLYLALDESTYFPNNPWEVFVNFTFFVQDRIKNEYLAIRYDD 60
+L+ YP G+K ++SLYL + W NFTF + ++ IR +
Sbjct: 335 KLVAYPRGSKDDD---NLSLYLEVANYESLSEG-WSHMANFTFTITNQFDQSKKIIR--E 388
Query: 61 GAVIRLHSMKRECGIDKLIPLQAFKEPSNGYLVDDSCVFGAEIFVIKPTGKGEALSIVKV 120
R H + G +++ + K+ +G+L++D + +I E L
Sbjct: 389 VLAHRFHRNHTDLGFSQILKKEMLKDKKSGWLLNDCLLVEFKI---------EVLHNSSY 439
Query: 121 PAQAGNILRWKIPNFSDLRDPEYYSSEFNAGGREW 155
+I WKI N S +++ S F G W
Sbjct: 440 QNDETSIYTWKINNVSAMKE-RATSPIFKVGNCRW 473
>gi|42569575|ref|NP_180846.3| TRAF-like family protein [Arabidopsis thaliana]
gi|330253661|gb|AEC08755.1| TRAF-like family protein [Arabidopsis thaliana]
Length = 416
Score = 40.4 bits (93), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 32/114 (28%), Positives = 51/114 (44%), Gaps = 11/114 (9%)
Query: 1 RLILYPNGNKKGQGTGHISLYLALDESTYFPNNP-WEVFVNFTFFVQDRIKNEYLAIR-- 57
+L++YP GN G+G SL L L S Y N P + V D++ +
Sbjct: 306 KLVMYPKGNGDGKGN---SLSLYLFASDYVTNGPKGGTLAIYKLRVLDQLNRNHCETECR 362
Query: 58 --YDDGAVIRLHSMKRECGIDKLIPLQAFKEPSNGYLVDDSCVFGAEIFVIKPT 109
+ V ++ S+ G K +PL+ + S G+LV+D G EI ++ T
Sbjct: 363 YWFPYNPVNQMDSL---WGRPKFLPLEELHKSSRGFLVNDQIYIGVEISIVSTT 413
Score = 39.3 bits (90), Expect = 0.54, Method: Compositional matrix adjust.
Identities = 38/153 (24%), Positives = 57/153 (37%), Gaps = 28/153 (18%)
Query: 17 HISLYLALDESTYFPNNPWEVFVNFTFFVQDRIKNEYLAIRYDDGAVIRLHSMKRECGID 76
H+S L + + + W+V NF + + +Y + V + KR G+
Sbjct: 167 HLSFVLEITDEK-CTGSTWDVKFNFKIGIVPQTGPDYCFV-----LVGHQNEKKRSQGLA 220
Query: 77 KLIPLQAFKEPSNGYLVDDSCVFGAEIFVIKPTGKGEALSIVKVPAQAGNILR------- 129
I KE +LV+D F AEI ++P + ++P G R
Sbjct: 221 NFISHTDLKE---RFLVNDKAGFYAEISDVQPN-----FPVTRIPRTMGTAERFKLIEFS 272
Query: 130 -------WKIPNFSDLRDPEYYSSEFNAGGREW 155
WKI FS E+ S EF G R W
Sbjct: 273 PKNSRFTWKITQFSSFDGEEHSSYEFTVGPRRW 305
>gi|357513213|ref|XP_003626895.1| Ubiquitin carboxyl-terminal hydrolase family protein [Medicago
truncatula]
gi|355520917|gb|AET01371.1| Ubiquitin carboxyl-terminal hydrolase family protein [Medicago
truncatula]
Length = 365
Score = 40.4 bits (93), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 28/113 (24%), Positives = 51/113 (45%), Gaps = 9/113 (7%)
Query: 1 RLILYPNGNKKGQGTGHISLYLALDESTYFPNNPWEVFVNFTFFVQDRIKNEYLAIRYDD 60
R+++ P GN+ G +S+ + + T F + W+ +VN + ++ N L I
Sbjct: 42 RIVMNPKGNENNSGYLSLSILSVVADITDFSKD-WKRYVNLELALTNQ-ANALLTIVKVV 99
Query: 61 GAVIRLHSMKRE------C-GIDKLIPLQAFKEPSNGYLVDDSCVFGAEIFVI 106
R ++E C +DK I L P N ++V+D+C+ A I +
Sbjct: 100 FNRTRQSETEQELNASNYCWSVDKFIHLDELHNPWNAFIVNDTCIIKARIISV 152
>gi|93117589|gb|ABE99697.1| TNF receptor associated factor 1 [Ctenopharyngodon idella]
Length = 552
Score = 40.4 bits (93), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 30/100 (30%), Positives = 46/100 (46%), Gaps = 6/100 (6%)
Query: 2 LILYPNGNKKGQGTGHISLYLALDESTYFPNNPWEVFVNFTFFVQDRIKNEYL--AIRYD 59
+ LY NG+ G+GT HISL+ + + Y P W TFF+ D+ + E++ A R D
Sbjct: 443 MRLYLNGDGVGKGT-HISLFFVIMKGEYDPILSWPFRHKVTFFLIDQNQREHVIDAFRPD 501
Query: 60 DGAVI---RLHSMKRECGIDKLIPLQAFKEPSNGYLVDDS 96
+ + M G PL + P + Y DD+
Sbjct: 502 LSSASFHRPVSEMNVASGCPLFFPLGKLRSPKHAYCKDDT 541
>gi|2702283|gb|AAB91986.1| unknown protein [Arabidopsis thaliana]
Length = 271
Score = 40.0 bits (92), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 38/153 (24%), Positives = 57/153 (37%), Gaps = 28/153 (18%)
Query: 17 HISLYLALDESTYFPNNPWEVFVNFTFFVQDRIKNEYLAIRYDDGAVIRLHSMKRECGID 76
H+S L + + + W+V NF + + +Y + V + KR G+
Sbjct: 64 HLSFVLEITDEKC-TGSTWDVKFNFKIGIVPQTGPDYCFV-----LVGHQNEKKRSQGLA 117
Query: 77 KLIPLQAFKEPSNGYLVDDSCVFGAEIFVIKPTGKGEALSIVKVPAQAGNILR------- 129
I KE +LV+D F AEI ++P + ++P G R
Sbjct: 118 NFISHTDLKER---FLVNDKAGFYAEISDVQPN-----FPVTRIPRTMGTAERFKLIEFS 169
Query: 130 -------WKIPNFSDLRDPEYYSSEFNAGGREW 155
WKI FS E+ S EF G R W
Sbjct: 170 PKNSRFTWKITQFSSFDGEEHSSYEFTVGPRRW 202
>gi|363740588|ref|XP_415406.3| PREDICTED: TNF receptor-associated factor 1 [Gallus gallus]
Length = 535
Score = 40.0 bits (92), Expect = 0.35, Method: Composition-based stats.
Identities = 27/100 (27%), Positives = 47/100 (47%), Gaps = 6/100 (6%)
Query: 2 LILYPNGNKKGQGTGHISLYLALDESTYFPNNPWEVFVNFTFFVQDRIKNEYL--AIRYD 59
L +Y NG+ G+GT H+SL+ + + Y PW TF + D+ E++ A R D
Sbjct: 427 LRIYLNGDGMGKGT-HVSLFFVVMKGDYDALLPWPFRHKVTFMLLDQNNREHIIDAFRPD 485
Query: 60 DGAVI---RLHSMKRECGIDKLIPLQAFKEPSNGYLVDDS 96
+ ++ M G +PL + P + Y+ +D+
Sbjct: 486 LASASFQRPVNDMNVASGCPTFLPLTKLQSPKHAYVKEDT 525
>gi|281208462|gb|EFA82638.1| meprin and TRAF domain-containing protein [Polysphondylium pallidum
PN500]
Length = 238
Score = 40.0 bits (92), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 32/118 (27%), Positives = 55/118 (46%), Gaps = 15/118 (12%)
Query: 1 RLILYPNGNKKGQGTGHISLYLALDE--STYFPNNPWEVFVNFTFFVQDRIKNEYLAIRY 58
RL ++P GN +SL+L ++E FPN VNF + ++ KN +R
Sbjct: 115 RLYVFPKGNT---SPNDLSLFLDMNEIKQQNFPNQK----VNFVLEMVNQ-KNPEENVRK 166
Query: 59 DDGAVIRLHSMKRECGIDKLIPLQAFKEPSNGYLVDDSCVFGAEIFVIKP---TGKGE 113
+ + S + G +K + + +P NG++VDD+ + A I + P T G+
Sbjct: 167 TADHIFNIRS--ADWGFNKFMKIPTLLDPKNGFIVDDTIIIHAHILNVIPEVITANGQ 222
>gi|4567245|gb|AAD23659.1| unknown protein [Arabidopsis thaliana]
Length = 1660
Score = 39.7 bits (91), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 39/166 (23%), Positives = 70/166 (42%), Gaps = 29/166 (17%)
Query: 1 RLILYPNGNKKGQGTGHISLYLALDESTYFPNNPWEVFVNFTFFVQDRIKNEYLAIRYDD 60
RLI+YP ++L + +S ++ W FV+ V ++ E +
Sbjct: 442 RLIVYPR------------VFLEVTDSR--SSSDWSCFVSHRLSVVNQRLEEKSVTKESQ 487
Query: 61 GAVIRLHSMKRECGIDKLIPLQAFKEPSNGYLVDDSCVFGAEIFVIKPTGKG----EALS 116
R ++ G + + L + + +G+LV D+ VF AE+ ++K T EA S
Sbjct: 488 N---RYSKAAKDWGWREFVTLTSLFDQDSGFLVQDTVVFSAEVLILKETSATKEYVEADS 544
Query: 117 IVKVPAQAGNILR----WKIPNFSDLRD----PEYYSSEFNAGGRE 154
V ++ + WK+ NF ++ + +S F AGG E
Sbjct: 545 TNSVSPTDNSVKKSSFTWKVENFLAFKEIMETRKIFSKFFQAGGCE 590
Score = 39.7 bits (91), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 37/154 (24%), Positives = 70/154 (45%), Gaps = 18/154 (11%)
Query: 1 RLILYPNGNKKGQGTGHISLYLALDESTYFPNNPWEVFVNFTFFVQDRIKNEYLAIRYDD 60
RL++YP G+ + G+IS+YL + + ++ W+ F ++ + + + ++ L I D
Sbjct: 101 RLLVYPRGDSQAL-PGYISIYLQIMDPRGTTSSRWDCFASYRLSIVNLV-DDSLTIHKDS 158
Query: 61 GAVIRLHSMKRECGIDKLIPLQAFKEPSNGYLV-DDSCVFGAEIFVIKPT------GKGE 113
R S K+ G + +P G+L +DS + A+I ++ + E
Sbjct: 159 WH--RFSSKKKSHGWCDFTLNSSILDPKMGFLFNNDSLLITADILILNESVSFSRDNNNE 216
Query: 114 ALSIVKVPAQAGNI-------LRWKIPNFSDLRD 140
S+ K + AG + WK+ NFS +D
Sbjct: 217 GQSLYKENSIAGPMPDVLSGKFTWKVNNFSLFKD 250
>gi|297820640|ref|XP_002878203.1| hypothetical protein ARALYDRAFT_907304 [Arabidopsis lyrata subsp.
lyrata]
gi|297324041|gb|EFH54462.1| hypothetical protein ARALYDRAFT_907304 [Arabidopsis lyrata subsp.
lyrata]
Length = 324
Score = 39.7 bits (91), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 31/124 (25%), Positives = 52/124 (41%), Gaps = 14/124 (11%)
Query: 1 RLILYPNGNKKGQGTGHISLYLALDESTYFPNNPWEVFVNFTFFVQDRIKNEYLAIRYDD 60
RL+ +P GN G H+SLYL + S + P+ W +F V ++ E +
Sbjct: 37 RLLAFPKGN----GVKHLSLYLDVPGSQFLPDG-WRRHADFHLSVVNQHSEE---LSLTK 88
Query: 61 GAVIRLHSMKRECGIDKLIPLQAFKEPSNGYLVDDSCVFGAEIFVIKPTGKGEALSIVKV 120
+ + G + PL + G+LV+ AE+ V++ GK + V
Sbjct: 89 ATQQWFDATACDWGFTSMFPLNKLHDKDGGFLVNGELKIVAEVSVLEVIGK------LDV 142
Query: 121 PAQA 124
PA+
Sbjct: 143 PAEC 146
>gi|242088617|ref|XP_002440141.1| hypothetical protein SORBIDRAFT_09g026713 [Sorghum bicolor]
gi|241945426|gb|EES18571.1| hypothetical protein SORBIDRAFT_09g026713 [Sorghum bicolor]
Length = 294
Score = 38.9 bits (89), Expect = 0.74, Method: Compositional matrix adjust.
Identities = 33/110 (30%), Positives = 51/110 (46%), Gaps = 19/110 (17%)
Query: 57 RYDDGAVIRLHSMKRECGIDKLIPLQAFKEPSNGYLVDDSCVFGAEIFVIKPTGKG---- 112
RYD ++ + K EC LI ++ + ++ +LVDDSCVFG I + K
Sbjct: 92 RYDFD--VKKYCSKNEC----LITVEELLKSAD-FLVDDSCVFGVRILQAYVSPKNNLAV 144
Query: 113 ---EALSIVKVPAQAGNILR----WKIPNFSDLRDPEYYSSEFNAGGREW 155
++I +V Q ++ W + NF L+DP S F A G +W
Sbjct: 145 APDNTITIQEVFLQKKEFIKGNYTWNVNNFLALKDP-VLSPAFEACGHKW 193
>gi|224072122|ref|XP_002196880.1| PREDICTED: ATP-dependent RNA helicase DDX51-like [Taeniopygia
guttata]
Length = 707
Score = 38.5 bits (88), Expect = 0.84, Method: Composition-based stats.
Identities = 26/80 (32%), Positives = 37/80 (46%), Gaps = 6/80 (7%)
Query: 45 VQDRIKNEYLAIRYDDGAVIRLHSMKRECGIDKLIPLQA------FKEPSNGYLVDDSCV 98
VQ RI++ +R G +L + GID P+QA + +NGYL+
Sbjct: 228 VQKRIRDNLCPVRNMPGIHPQLLKKLQRNGIDSFFPVQAEVIPAILQSAANGYLLGRGGY 287
Query: 99 FGAEIFVIKPTGKGEALSIV 118
+I V PTG G+ LS V
Sbjct: 288 RPKDICVSAPTGSGKTLSFV 307
>gi|414883625|tpg|DAA59639.1| TPA: hypothetical protein ZEAMMB73_244345 [Zea mays]
Length = 1017
Score = 38.5 bits (88), Expect = 0.85, Method: Compositional matrix adjust.
Identities = 25/88 (28%), Positives = 44/88 (50%), Gaps = 4/88 (4%)
Query: 20 LYLALDESTYFPNNPWEVFVNFTFFVQDRIKNEYLAIRYDDGAVIRLHSMKRECGIDKLI 79
+YL + +S P W + F+ V ++I N++ IR + + + + + G +
Sbjct: 1 MYLDVADSGVLPYG-WTRYAQFSLSVVNQIHNKF-TIRKETQH--QFSARESDWGFTSFM 56
Query: 80 PLQAFKEPSNGYLVDDSCVFGAEIFVIK 107
PL S GYLV+D+C+ AE+ V K
Sbjct: 57 PLGELYNHSRGYLVNDTCIVEAEVAVCK 84
>gi|414883626|tpg|DAA59640.1| TPA: hypothetical protein ZEAMMB73_244345 [Zea mays]
Length = 938
Score = 38.5 bits (88), Expect = 0.92, Method: Compositional matrix adjust.
Identities = 25/88 (28%), Positives = 44/88 (50%), Gaps = 4/88 (4%)
Query: 20 LYLALDESTYFPNNPWEVFVNFTFFVQDRIKNEYLAIRYDDGAVIRLHSMKRECGIDKLI 79
+YL + +S P W + F+ V ++I N++ IR + + + + + G +
Sbjct: 1 MYLDVADSGVLPYG-WTRYAQFSLSVVNQIHNKF-TIRKETQH--QFSARESDWGFTSFM 56
Query: 80 PLQAFKEPSNGYLVDDSCVFGAEIFVIK 107
PL S GYLV+D+C+ AE+ V K
Sbjct: 57 PLGELYNHSRGYLVNDTCIVEAEVAVCK 84
>gi|414883624|tpg|DAA59638.1| TPA: hypothetical protein ZEAMMB73_244345 [Zea mays]
Length = 953
Score = 38.5 bits (88), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 25/88 (28%), Positives = 44/88 (50%), Gaps = 4/88 (4%)
Query: 20 LYLALDESTYFPNNPWEVFVNFTFFVQDRIKNEYLAIRYDDGAVIRLHSMKRECGIDKLI 79
+YL + +S P W + F+ V ++I N++ IR + + + + + G +
Sbjct: 1 MYLDVADSGVLPYG-WTRYAQFSLSVVNQIHNKF-TIRKETQH--QFSARESDWGFTSFM 56
Query: 80 PLQAFKEPSNGYLVDDSCVFGAEIFVIK 107
PL S GYLV+D+C+ AE+ V K
Sbjct: 57 PLGELYNHSRGYLVNDTCIVEAEVAVCK 84
>gi|357124579|ref|XP_003563976.1| PREDICTED: uncharacterized protein LOC100835922 [Brachypodium
distachyon]
Length = 69
Score = 38.1 bits (87), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 16/36 (44%), Positives = 22/36 (61%)
Query: 74 GIDKLIPLQAFKEPSNGYLVDDSCVFGAEIFVIKPT 109
G IP + F++PS GYLV CV A+I V+ P+
Sbjct: 31 GWSDFIPHETFRDPSRGYLVGSCCVVKADITVVGPS 66
>gi|297840729|ref|XP_002888246.1| hypothetical protein ARALYDRAFT_893708 [Arabidopsis lyrata subsp.
lyrata]
gi|297334087|gb|EFH64505.1| hypothetical protein ARALYDRAFT_893708 [Arabidopsis lyrata subsp.
lyrata]
Length = 216
Score = 38.1 bits (87), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 18/44 (40%), Positives = 26/44 (59%), Gaps = 1/44 (2%)
Query: 65 RLHSMKRECGIDKLIPLQAFKEPSNGYLVDD-SCVFGAEIFVIK 107
R H K++ G+ +PL+ F+ P GY DD S VFG +I +K
Sbjct: 33 RFHLFKQQWGLLTFLPLEYFRNPGYGYSFDDGSVVFGVDINTLK 76
>gi|218184745|gb|EEC67172.1| hypothetical protein OsI_34040 [Oryza sativa Indica Group]
Length = 421
Score = 37.7 bits (86), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 40/172 (23%), Positives = 69/172 (40%), Gaps = 29/172 (16%)
Query: 6 PNGNKKGQGTGHISLYLALDESTYFPNNPWEVFVNFTFFVQDRIKNEYLAIRYDDGAVIR 65
P G GT H++L L L ++ P+ + + F + + K +L ++ ++
Sbjct: 154 PMHKTLGDGTPHVALSLVLSRLSFKPD--YTMNAVFVLSMYNHSKGNFLVVKASYNFDVK 211
Query: 66 LHSMKRECGIDKLIPLQAFKEPSNGYLVDDSCVFGAEIFVI-----------------KP 108
+ C LI L+ + S+ YL+DD+CV G EI I
Sbjct: 212 NTHSRNIC----LISLED-QLKSSEYLLDDTCVLGVEILQIDVCRSLKKKNVKVQKKFLF 266
Query: 109 TGKGEALSIVKVPAQAGNILR----WKIPNFSDL-RDPEYYSSEFNAGGREW 155
K + +S+ + Q + + W + NF +L P S F G R+W
Sbjct: 267 LQKKKFVSVQNLFLQKKDFTKGDYTWTMNNFPELDLKPSVLSPAFEIGRRKW 318
>gi|326929902|ref|XP_003211092.1| PREDICTED: ATP-dependent RNA helicase DDX51-like [Meleagris
gallopavo]
Length = 582
Score = 37.7 bits (86), Expect = 1.6, Method: Composition-based stats.
Identities = 27/81 (33%), Positives = 36/81 (44%), Gaps = 6/81 (7%)
Query: 44 FVQDRIKNEYLAIRYDDGAVIRLHSMKRECGIDKLIPLQA------FKEPSNGYLVDDSC 97
VQ RIK I+ G +L + GI+ P+QA + SNGYL+
Sbjct: 100 LVQKRIKENLTPIKDVPGIHPKLLKKLQMNGIESFFPVQAEVIPAVLQSASNGYLMGQGG 159
Query: 98 VFGAEIFVIKPTGKGEALSIV 118
+I V PTG G+ LS V
Sbjct: 160 YRPKDICVSAPTGSGKTLSFV 180
>gi|15230996|ref|NP_191384.1| TRAF-like family protein [Arabidopsis thaliana]
gi|6735337|emb|CAB68163.1| putative protein [Arabidopsis thaliana]
gi|332646238|gb|AEE79759.1| TRAF-like family protein [Arabidopsis thaliana]
Length = 317
Score = 37.7 bits (86), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 31/110 (28%), Positives = 48/110 (43%), Gaps = 6/110 (5%)
Query: 1 RLILYPNGNKKGQGTGHISLYLALDESTYFPNNPWEVFVNFTFFVQDRIKNEYLAIRYDD 60
RL+ +P GN + H+SLYL + ES P W F+F + + I E + R +
Sbjct: 39 RLLAFPKGN--DTKSDHLSLYLDVAESESLPCG-WRRHAQFSFTIVNHIP-EKCSQRKE- 93
Query: 61 GAVIRLHSMKRECGIDKLIPLQAFKEPSNGYLVDDSCVFGAEIFVIKPTG 110
+ + G L+PL K +G+LV EI V++ G
Sbjct: 94 -TIHWFCEKVSDWGFTNLVPLIELKAEDSGFLVKGELKIVVEIEVLEVIG 142
>gi|15230998|ref|NP_191386.1| phospholipase-like protein (PEARLI 4) with TRAF-like domain
[Arabidopsis thaliana]
gi|79315506|ref|NP_001030883.1| phospholipase-like protein (PEARLI 4) with TRAF-like domain
[Arabidopsis thaliana]
gi|6735339|emb|CAB68165.1| putative protein [Arabidopsis thaliana]
gi|63003780|gb|AAY25419.1| At3g58270 [Arabidopsis thaliana]
gi|332646240|gb|AEE79761.1| phospholipase-like protein (PEARLI 4) with TRAF-like domain
[Arabidopsis thaliana]
gi|332646241|gb|AEE79762.1| phospholipase-like protein (PEARLI 4) with TRAF-like domain
[Arabidopsis thaliana]
Length = 343
Score = 37.4 bits (85), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 27/111 (24%), Positives = 49/111 (44%), Gaps = 8/111 (7%)
Query: 1 RLILYPNGNKKGQGTGHISLYLALDESTYFPNNPWEVFVNFTFFVQDRIKNEYLAIRYDD 60
RL+ +P GN G +SLYLA+ S + P+ W F F V +++ +E R
Sbjct: 37 RLLAFPKGN----GVEKLSLYLAVAGSEFLPDG-WRRHAYFHFSVVNQLSDELSQARETK 91
Query: 61 GAVIRLHSMKRECGIDKLIPLQAFKEPSNGYLVDDSCVFGAEIFVIKPTGK 111
+ + G ++ L+ + G+LV+ ++ V++ GK
Sbjct: 92 N---WFDASTSDWGFTSMLSLKKLHDKDGGFLVNGELKIVVDVSVLEVIGK 139
>gi|449281559|gb|EMC88606.1| ATP-dependent RNA helicase DDX51, partial [Columba livia]
Length = 489
Score = 37.4 bits (85), Expect = 2.1, Method: Composition-based stats.
Identities = 27/81 (33%), Positives = 36/81 (44%), Gaps = 6/81 (7%)
Query: 44 FVQDRIKNEYLAIRYDDGAVIRLHSMKRECGIDKLIPLQA------FKEPSNGYLVDDSC 97
VQ RIK+ + + G RL + GI P+QA + SNGYL+
Sbjct: 17 LVQKRIKDNLVPVGDIPGIHPRLLKKLQMNGIQSFFPVQAEVIPAILQSASNGYLMGQGG 76
Query: 98 VFGAEIFVIKPTGKGEALSIV 118
+I V PTG G+ LS V
Sbjct: 77 YRPKDICVSAPTGSGKTLSFV 97
>gi|224141913|ref|XP_002324305.1| predicted protein [Populus trichocarpa]
gi|222865739|gb|EEF02870.1| predicted protein [Populus trichocarpa]
Length = 541
Score = 37.0 bits (84), Expect = 2.7, Method: Composition-based stats.
Identities = 37/170 (21%), Positives = 66/170 (38%), Gaps = 40/170 (23%)
Query: 1 RLILYPNGNKKGQGTGHISLYLALDESTYFPNNPWEVFVNFTFFVQDRIKNEYLAIRYDD 60
RL++YP G+ + G+IS+YL + + ++ W+ F ++ + + + DD
Sbjct: 114 RLLIYPKGDSQAL-PGYISIYLQIMDPRGTSSSKWDCFASYRLSIFNPL---------DD 163
Query: 61 GAVI------RLHSMKRECGIDKLIPLQAFKEPSNGYLVDDSCVF-GAEIFVIKPT---- 109
I R S K+ G P + GYL ++ CV A+I ++ +
Sbjct: 164 SKTIHRDSWHRFSSKKKSHGWCDFTPASTVFDSKLGYLFNNDCVLITADILILNESVSFI 223
Query: 110 ------------GKGEALSIVKVPAQAGNI-------LRWKIPNFSDLRD 140
G +LSI G + WK+ NFS ++
Sbjct: 224 RDNSSSTSNNEVQSGVSLSISSNSVVVGPVSDVLSGKFTWKVHNFSLFKE 273
>gi|109676324|gb|ABG37644.1| unknown [Populus trichocarpa]
Length = 1649
Score = 37.0 bits (84), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 29/137 (21%), Positives = 56/137 (40%), Gaps = 17/137 (12%)
Query: 32 NNPWEVFVNFTFFVQDRIKNEYLAIRYDDGAVIRLHSMKRECGIDKLIPLQAFKEPSNGY 91
++ W FV+ V ++ E + R ++ G + + L + + +G+
Sbjct: 440 SSDWSCFVSHRLSVVNQRMEEKSVTKESQN---RYSKAAKDWGWREFVTLTSLFDQDSGF 496
Query: 92 LVDDSCVFGAEIFVIKPTGKGEALSIVKVPAQAG----------NILRWKIPNFSDLRD- 140
LV D+ VF AE+ ++K T + + + G + WK+ NF ++
Sbjct: 497 LVQDTVVFSAEVLILKETSIMQDFTDQDTESTNGTSQIDKVGKRSSFTWKVENFLSFKEI 556
Query: 141 ---PEYYSSEFNAGGRE 154
+ +S F AGG E
Sbjct: 557 METRKIFSKFFQAGGCE 573
Score = 37.0 bits (84), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 35/161 (21%), Positives = 64/161 (39%), Gaps = 29/161 (18%)
Query: 1 RLILYPNGNKKGQGTGHISLYLALDESTYFPNNPWEVFVNFTFFVQDRIKNEYLAIRYDD 60
RL++YP G+ + G+IS+YL + + ++ W+ F ++ + + + + R
Sbjct: 69 RLLIYPKGDSQAL-PGYISIYLQIMDPRGTSSSKWDCFASYRLSIVNPLDDSKTIHR--- 124
Query: 61 GAVIRLHSMKRECGIDKLIPLQAFKEPSNGYLVDDSCVF-GAEIFVIKPT---------- 109
+ R S K+ G P + GYL ++ CV A+I ++ +
Sbjct: 125 DSWHRFSSKKKSHGWCDFTPASTVFDSKLGYLFNNDCVLITADILILNESVSFMRDNSSS 184
Query: 110 -------GKGEALSIVKVPAQAGNI-------LRWKIPNFS 136
G +LSI G + WK+ NFS
Sbjct: 185 STSNNEVQSGVSLSISSNSVAVGPVSDVLSGKCTWKVHNFS 225
>gi|12325197|gb|AAG52548.1|AC013289_15 hypothetical protein; 72397-73404 [Arabidopsis thaliana]
Length = 212
Score = 36.6 bits (83), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 32/138 (23%), Positives = 55/138 (39%), Gaps = 35/138 (25%)
Query: 20 LYLALDESTYFPNNP-WEVFVNFTFFVQDRIKNEYLAIRYDDGAVIRLHSMKRECGIDKL 78
+Y+ LD S+ + P EVF FFV ++ +N+Y D + R ++K G+ K+
Sbjct: 1 MYVELDSSSLMESKPPTEVFAELRFFVYNKKQNKYFT---KDVEIKRFDALKMVWGLPKV 57
Query: 79 IPLQAFKEPSNGYLVDDSCVFGAEIFVIKPTGKGEALSIVKVPAQAGNILRWKIPNFSDL 138
P + F + ++ N+ W + NFS
Sbjct: 58 FPYETFINRK-----------------------------MDTYSRVMNVT-WSVKNFSQW 87
Query: 139 RDPEYYS-SEFNAGGREW 155
++ E + F+ GGREW
Sbjct: 88 KENECSKPNRFSIGGREW 105
>gi|255548870|ref|XP_002515491.1| conserved hypothetical protein [Ricinus communis]
gi|223545435|gb|EEF46940.1| conserved hypothetical protein [Ricinus communis]
Length = 1575
Score = 36.6 bits (83), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 27/109 (24%), Positives = 51/109 (46%), Gaps = 7/109 (6%)
Query: 1 RLILYPNGNKKGQGTGHISLYLALDESTYFPNNPWEVFVNFTFFVQDRIKNEYLAIRYDD 60
RL++YP G+ + G+IS+YL + + ++ W+ F ++ + + I + R
Sbjct: 101 RLLIYPKGDSQAL-PGYISIYLQIMDPRGTSSSKWDCFASYRLSIVNLIDDSKTIHR--- 156
Query: 61 GAVIRLHSMKRECGIDKLIPLQAFKEPSNGYLV---DDSCVFGAEIFVI 106
+ R S K+ G P + GYL +DS + A+IF++
Sbjct: 157 DSWHRFSSKKKSHGWCDFTPSNTIFDSKLGYLFNSNNDSVLITADIFIL 205
>gi|255317094|gb|ACU01869.1| ubiquitin specific protease 12 variant 2 [Glycine max]
Length = 792
Score = 36.6 bits (83), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 19/59 (32%), Positives = 35/59 (59%), Gaps = 6/59 (10%)
Query: 1 RLILYPNGNKKGQGTGHISLYLALDESTYFPNNPWEVFVNFTFFVQDRIKNEYLAIRYD 59
R++++P GN G GH+S+Y+ + +S P W + +F V ++I ++Y +IR D
Sbjct: 91 RILIFPKGN----GAGHLSMYIDVADSATLPYG-WSRYAHFNLTVVNQIHSKY-SIRKD 143
>gi|302805791|ref|XP_002984646.1| hypothetical protein SELMODRAFT_120631 [Selaginella moellendorffii]
gi|300147628|gb|EFJ14291.1| hypothetical protein SELMODRAFT_120631 [Selaginella moellendorffii]
Length = 786
Score = 36.6 bits (83), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 27/107 (25%), Positives = 50/107 (46%), Gaps = 8/107 (7%)
Query: 1 RLILYPNGNKKGQGTGHISLYLALDESTYFPNNPWEVFVNFTFFVQDRIKNEYLAIRYDD 60
R++++ GN +S+YL + +S W F F V ++ + L+IR D
Sbjct: 52 RILVFTQGN----NVDCLSMYLDVADSASLSYG-WSRFAQFNLAVINQF-DPKLSIRKDT 105
Query: 61 GAVIRLHSMKRECGIDKLIPLQAFKEPSNGYLVDDSCVFGAEIFVIK 107
++ + + G +PL +P GYLV+D+ + A++ V K
Sbjct: 106 QH--HFNAKESDWGFTSFMPLHDLYDPGRGYLVNDTLILEADVNVRK 150
>gi|302797505|ref|XP_002980513.1| hypothetical protein SELMODRAFT_113245 [Selaginella moellendorffii]
gi|300151519|gb|EFJ18164.1| hypothetical protein SELMODRAFT_113245 [Selaginella moellendorffii]
Length = 786
Score = 36.6 bits (83), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 27/107 (25%), Positives = 50/107 (46%), Gaps = 8/107 (7%)
Query: 1 RLILYPNGNKKGQGTGHISLYLALDESTYFPNNPWEVFVNFTFFVQDRIKNEYLAIRYDD 60
R++++ GN +S+YL + +S W F F V ++ + L+IR D
Sbjct: 52 RILVFTQGN----NVDCLSMYLDVADSASLSYG-WSRFAQFNLAVINQF-DPKLSIRKDT 105
Query: 61 GAVIRLHSMKRECGIDKLIPLQAFKEPSNGYLVDDSCVFGAEIFVIK 107
++ + + G +PL +P GYLV+D+ + A++ V K
Sbjct: 106 QH--HFNAKESDWGFTSFMPLHDLYDPGRGYLVNDTLILEADVNVRK 150
>gi|297727693|ref|NP_001176210.1| Os10g0478500 [Oryza sativa Japonica Group]
gi|110289266|gb|AAP54286.2| MATH domain containing protein [Oryza sativa Japonica Group]
gi|255679496|dbj|BAH94938.1| Os10g0478500 [Oryza sativa Japonica Group]
Length = 685
Score = 36.6 bits (83), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 33/127 (25%), Positives = 54/127 (42%), Gaps = 10/127 (7%)
Query: 36 EVFVNFTFFVQDRIKNEYLAIRYDDGAVIRLHSMKRECGIDKLIPLQAFKEPSNGYLVDD 95
++ V+ TF + I N + A + H K LIPL ++ S+ +L DD
Sbjct: 456 DIVVDTTF--ELSIYNHSRRTHHGTRASYKFHYPKYYSEYTYLIPLSKLQDGSD-FLADD 512
Query: 96 SCVFGAEIF---VIKPTGKGEALSIVKVPAQAGNILR----WKIPNFSDLRDPEYYSSEF 148
+CVFG +I KPT + ++I V Q ++ W I + S +F
Sbjct: 513 TCVFGLDILRARKFKPTRNAKGVTIQHVFLQTKGFMQGNYTWNIEDSKLDLKSIICSPKF 572
Query: 149 NAGGREW 155
+ G +W
Sbjct: 573 DIGEHKW 579
>gi|109676322|gb|ABG37643.1| unknown [Populus trichocarpa]
Length = 2224
Score = 36.6 bits (83), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 38/170 (22%), Positives = 68/170 (40%), Gaps = 34/170 (20%)
Query: 1 RLILYPNGNKKGQGTGHISLYLALDESTYFPNNPWEVFVNFTFFVQDRIKNEYLAIRYDD 60
RLI+YP ++L + +S ++ W FV+ V ++ E +
Sbjct: 455 RLIVYPR------------VFLEVTDSRNTSSD-WSCFVSHRLSVVNQRMEEKSVTKESQ 501
Query: 61 GAVIRLHSMKRECGIDKLIPLQAFKEPSNGYLVDDSCVFGAEIFVIKPT----------- 109
R ++ G + + L + + +G+LV D+ VF AE+ ++K T
Sbjct: 502 N---RYSKAAKDWGWREFVTLTSLFDQDSGFLVQDTVVFSAEVLILKETSIMQDFIDQDT 558
Query: 110 -GKGEALSIVKVPAQAGNILRWKIPNFSDLRD----PEYYSSEFNAGGRE 154
A I V ++ WK+ NF ++ + +S F AGG E
Sbjct: 559 ESTNSASQIDGVGKRSS--FTWKVENFLSFKEIMETRKIFSKFFQAGGCE 606
Score = 36.2 bits (82), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 36/166 (21%), Positives = 65/166 (39%), Gaps = 40/166 (24%)
Query: 1 RLILYPNGNKKGQGTGHISLYLALDESTYFPNNPWEVFVNFTFFVQDRIKNEYLAIRYDD 60
RL++YP G+ + G+IS+YL + + ++ W+ F ++ + + + DD
Sbjct: 103 RLLIYPKGDSQAL-PGYISIYLQIMDPRGTSSSKWDCFASYRLSIFNPL---------DD 152
Query: 61 GAVI------RLHSMKRECGIDKLIPLQAFKEPSNGYLVDDSCVF-GAEIFVI------- 106
I R S K+ G P + GYL ++ CV A+I ++
Sbjct: 153 SKTIHRDSWHRFSSKKKSHGWCDFTPASTVFDSKLGYLFNNDCVLITADILILNESVSFI 212
Query: 107 ----KPTGKGEALSIVKVPAQAGNIL------------RWKIPNFS 136
T E S V + + +++ WK+ NFS
Sbjct: 213 RDNSSSTSNNEVQSGVSLSISSNSVVVGPVSDVLSGKFTWKVHNFS 258
>gi|15230992|ref|NP_191380.1| TRAF-like family protein [Arabidopsis thaliana]
gi|6735333|emb|CAB68159.1| putative protein [Arabidopsis thaliana]
gi|332646233|gb|AEE79754.1| TRAF-like family protein [Arabidopsis thaliana]
Length = 330
Score = 35.8 bits (81), Expect = 5.8, Method: Compositional matrix adjust.
Identities = 30/116 (25%), Positives = 50/116 (43%), Gaps = 16/116 (13%)
Query: 1 RLILYPNG-NKKGQGTGHISLYLALDESTYFPNNPWEVFVNFTFFV----QDRIKNEYLA 55
RL++YP G NK G H+SL+L + + P W + + D+I A
Sbjct: 37 RLLVYPEGFNKSG---DHLSLFLEVADPRSLPPG-WSRHARYLLTIVNQHSDKISKRNEA 92
Query: 56 IRYDDGAVIRLHSMKRECGIDKLIPLQAFKEPSNGYLVDDSCVFGAEIFVIKPTGK 111
++ + + G+ +IPL G+LV+D AE+ V++ GK
Sbjct: 93 TKWFNQKI-------PGWGLSAMIPLTKLHAKDGGFLVNDELKIVAEVNVLEVIGK 141
>gi|357136663|ref|XP_003569923.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 13-like
[Brachypodium distachyon]
Length = 1085
Score = 35.0 bits (79), Expect = 9.5, Method: Compositional matrix adjust.
Identities = 26/107 (24%), Positives = 53/107 (49%), Gaps = 8/107 (7%)
Query: 1 RLILYPNGNKKGQGTGHISLYLALDESTYFPNNPWEVFVNFTFFVQDRIKNEYLAIRYDD 60
R++++P GN +G +S+YL + ++ P W F+ V +++ ++ ++R +
Sbjct: 61 RVLVFPKGNN-AEG---LSMYLDVADANLLPPG-WSRSAQFSLAVINQLDSKQ-SLRKE- 113
Query: 61 GAVIRLHSMKRECGIDKLIPLQAFKEPSNGYLVDDSCVFGAEIFVIK 107
A + + G + L + S GY+V+D C+ AE+ V K
Sbjct: 114 -ATHNFNYRASDWGFTSFMSLMDLYDASKGYVVNDQCIIEAEVAVRK 159
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.321 0.141 0.440
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 2,816,723,868
Number of Sequences: 23463169
Number of extensions: 118057964
Number of successful extensions: 191108
Number of sequences better than 100.0: 287
Number of HSP's better than 100.0 without gapping: 100
Number of HSP's successfully gapped in prelim test: 187
Number of HSP's that attempted gapping in prelim test: 190467
Number of HSP's gapped (non-prelim): 527
length of query: 155
length of database: 8,064,228,071
effective HSP length: 117
effective length of query: 38
effective length of database: 9,614,004,594
effective search space: 365332174572
effective search space used: 365332174572
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 71 (32.0 bits)