BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 041774
(382 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q9LXZ3|FB204_ARATH F-box protein At3g56470 OS=Arabidopsis thaliana GN=At3g56470 PE=2
SV=1
Length = 367
Score = 112 bits (279), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 98/362 (27%), Positives = 151/362 (41%), Gaps = 42/362 (11%)
Query: 17 KSWSNLPPDIVNLIAENLYYYADYADQVRFRTICKSWQSTCVPLKEINLQPWL--FSCHS 74
+++ NLP D++ L+ L D +R +CK+W CV L+ I+ PWL FS
Sbjct: 27 QTFINLPCDLLQLVISRL----PLKDNIRASAVCKTWHEACVSLRVIHTSPWLIYFSKTD 82
Query: 75 ISH-LFDTTHKLKYTIKTDPRVLHSKIKASKDGWVLFSKANINPSPFLFISYNSSPSSLF 133
S+ L+D + + + P + ++ SKDGW+L YN + L
Sbjct: 83 DSYELYDPSMQKNCNLHF-PELSGFRVCYSKDGWLLM--------------YNPNSYQLL 127
Query: 134 FYNPFSASIIELPPLHMFSSDKATFSTAPTSLFCTVF-VLSVYYSTRRICISTCKPGERT 192
F+NPF+ + +P L M + FS APTS C +F V SV ++ I I T +
Sbjct: 128 FFNPFTRDCVPMPTLWMAYDQRMAFSCAPTSTSCLLFTVTSVTWN--YITIKTYFANAKE 185
Query: 193 WTRHFFDGF----YGDLHGLTYLRGVLYCSFCNNVLGAFRVSTNSWKIYPHNRIRPTSVY 248
W F + + + GV YC L F S N W + P RP
Sbjct: 186 WKTSVFKNRLQRNFNTFEQIVFSNGVFYCLTNTGCLALFDPSLNYWNVLPG---RPPKRP 242
Query: 249 LYYGLIESEHEGSLLSVYYDSHRLQWLVFRFDLIKENWVEVNRLDDRALFLNPSSTSMKL 308
G +EH+G + +Y H + V + DL W E L ++ + S+ +
Sbjct: 243 GSNGCFMTEHQGEIFLIYMYRH-MNPTVLKLDLTSFEWAERKTLGGLTIYASALSSESRA 301
Query: 309 AVDDASELANTIHVECSSSF-----YKKPEDERLDCPQSFDWILEENPETIVWIQPPLKR 363
S + N + + F Y K ++E C F W ++NP +WI PPL
Sbjct: 302 EQQKQSGIWNCLCLSVFHGFKRTCIYYKVDEESEVC---FKW-KKQNPYENIWIMPPLNL 357
Query: 364 GD 365
D
Sbjct: 358 ID 359
>sp|Q9FVS1|FBK23_ARATH F-box/kelch-repeat protein At1g57790 OS=Arabidopsis thaliana
GN=At1g57790 PE=2 SV=1
Length = 352
Score = 107 bits (267), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 91/364 (25%), Positives = 157/364 (43%), Gaps = 35/364 (9%)
Query: 10 NMKRSATKSWSNLPPDIVNLIAENLYYYADYADQVRFRTICKSWQSTCVPLKEINLQPWL 69
N + W +LP ++++ + + + D VR +CKSW V ++ I+ PWL
Sbjct: 4 NTNEGSKNLWKDLPLELLSSVMT----FLEIKDNVRASVVCKSWFEAAVSVRVIDKSPWL 59
Query: 70 F---SCHSISHLFDTTHKLKYTIKTDPRVLHSKIKASKDGWVLFSKANINPSPFLFISYN 126
+ +D ++ KYT++ ++ ++ SKDGW+L S+ +
Sbjct: 60 MYFPETKNTYDFYDPSNCKKYTMELPKSLVGFIVRYSKDGWLLMSQED------------ 107
Query: 127 SSPSSLFFYNPFSASIIELPPLHMFSSDK-ATFSTAPTSLFCTVFVLSVYYSTRRICIST 185
S +NPF+ ++ LP LH+F+ + FS+APTS C VF + Y + I T
Sbjct: 108 --SSHFVLFNPFTMDVVALPFLHLFTYYQLVGFSSAPTSSECVVFTIKD-YDPGHVTIRT 164
Query: 186 CKPGERTWTRHFFDGFYGDL--HGLTYLRGVLYCSFCNNVLGAFRVSTNSWKIYPHNRIR 243
PG+ WT + + D+ + + + GV YC N + F S +W + R
Sbjct: 165 WSPGQTMWTSMQVESQFLDVDHNNVVFSNGVFYCLNQRNHVAVFDPSLRTWNVLDVPPPR 224
Query: 244 -PTSVYLYYGLIESEHEGSLLSVYYDSHRLQWLVFRFDLIKENWVEVNRLDDRALFLNPS 302
P G ++G +L + ++ LVF+ DL + W E + L +F++
Sbjct: 225 CPDDKSWNEGKFMVGYKGDILVIRTYENKDP-LVFKLDLTRGIWEEKDTLGSLTIFVSRK 283
Query: 303 STSMKLAVDDASELANTIHV------ECSSSFYKKPEDERLDCPQSFDWILEENPETIVW 356
S + V D L N+++ E S Y E DW + + + I W
Sbjct: 284 SCESRTYVKDGM-LRNSVYFPELCYNEKQSVVYSFDEGRYHLREHDLDWGKQLSSDNI-W 341
Query: 357 IQPP 360
I+PP
Sbjct: 342 IEPP 345
>sp|Q9XIA2|FB49_ARATH F-box protein At1g49360 OS=Arabidopsis thaliana GN=At1g49360 PE=2
SV=1
Length = 481
Score = 97.1 bits (240), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 86/300 (28%), Positives = 135/300 (45%), Gaps = 39/300 (13%)
Query: 22 LPPDIVNLIAENLYYYADYADQVRFRTICKSWQSTCVPLKEINLQPWL-----FSCHSIS 76
LP D+V LI L + D +R T+CK+W ++ + + WL F +S
Sbjct: 111 LPSDLVRLILSRL----SFKDNIRSSTVCKAWGDIAASVRVKSRRCWLLYHDAFQDKGVS 166
Query: 77 H-LFDTTHKLKYTIKTDPRVLHSK-IKASKDGWVLFSKANINPSPFLFISYNSSPSSLFF 134
+ FD K K P + S I SKDGW+L +N S L + ++F
Sbjct: 167 YGFFDPVEKKKTKEMNLPELSKSSGILYSKDGWLL-----MNDSLSLI-------ADMYF 214
Query: 135 YNPFSASIIELPPLHMFSSDKA--TFSTAPTSLFCTVFVLSVYYSTRRICISTCKPGERT 192
+NPF+ I+LP + S FS APT C VF ++ S+ I IST +PG T
Sbjct: 215 FNPFTRERIDLPRNRIMESVHTNFAFSCAPTKKSCLVFGINNISSSVAIKISTWRPGATT 274
Query: 193 WTR----HFFDGFYGDLHGLTYLRGVLYCSFCNNVLGAFRVSTNSWKIYPHNRI--RPTS 246
W + F ++ L + Y G+ Y + LG F + +W + P I P S
Sbjct: 275 WLHEDFPNLFPSYFRRLGNILYSDGLFYTA-SETALGVFDPTARTWNVLPVQPIPMAPRS 333
Query: 247 VYLYYGLIESEHEGSLLSVYYDSHRLQWLVFRFDLIKENWVEVNRLDDRALFLNPSSTSM 306
+ +E+EG + V D+ L+ +V+R + ++ W + LD ++FL+ S M
Sbjct: 334 IRWM-----TEYEGHIFLV--DASSLEPMVYRLNRLESVWEKKETLDGSSIFLSDGSCVM 386
>sp|Q9LSA5|FBK62_ARATH F-box/kelch-repeat protein At3g18720 OS=Arabidopsis thaliana
GN=At3g18720 PE=2 SV=1
Length = 380
Score = 92.8 bits (229), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 84/299 (28%), Positives = 128/299 (42%), Gaps = 44/299 (14%)
Query: 21 NLPPDIVNLIAENLYYYADYADQVRFRTICKSWQSTCVPLKEINLQPWLFSCHSISH--- 77
+P D++ I L A+ + +CK+W V +++ +PWLF S
Sbjct: 51 QIPTDLLQEILSRLGLKAN----IHASLVCKTWLKEAVSVRKFQSRPWLFYPQSQRGGPK 106
Query: 78 -----LFD----TTHKLKYTIKTDPRVLHSKIKASKDGWVLFSKANINPSPFLFISYNSS 128
LF+ TH LK+ T R +K+ +KDGW+L K N
Sbjct: 107 EGDYVLFNPSRSQTHHLKFPELTGYR---NKLACAKDGWLLVVKDN-------------- 149
Query: 129 PSSLFFYNPFSASIIELPPLHMFSS-DKATFSTAPTSLFCTVFVL---SVYYSTRRICIS 184
P +FF NPF+ I LP + S+ D TFS APTS C V S Y+ + +
Sbjct: 150 PDVVFFLNPFTGERICLPQVPQNSTRDCLTFSAAPTSTSCCVISFTPQSFLYAV--VKVD 207
Query: 185 TCKPGERTWTRHFFD-GFYGD-LHGLTYLRGVLYCSFCNNVLGAFRVSTNSWKIYPHNRI 242
T +PGE WT H FD YG+ ++ + G+ YC + L F S +W + P
Sbjct: 208 TWRPGESVWTTHHFDQKRYGEVINRCIFSNGMFYCLSTSGRLSVFDPSRETWNVLPVKPC 267
Query: 243 RP--TSVYLYYGLIESEHEGSLLSVYYDS-HRLQWLVFRFDLIKENWVEVNRLDDRALF 298
R + L + +EHEG + V + + L F+ +L W E+ + +F
Sbjct: 268 RAFRRKIMLVRQVFMTEHEGDIFVVTTRRVNNRKLLAFKLNLQGNVWEEMKVPNGLTVF 326
>sp|Q1G391|FB217_ARATH F-box protein At4g00893 OS=Arabidopsis thaliana GN=At4g00893 PE=2
SV=1
Length = 388
Score = 90.5 bits (223), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 89/378 (23%), Positives = 158/378 (41%), Gaps = 50/378 (13%)
Query: 5 RRSRRNMKRSATKSWSNLPPDIVNLIAENLYYYADYADQVRFRTICKSWQSTCVPLKEIN 64
+R + + K+ S+++LP ++ E + D +R CKSW V ++ ++
Sbjct: 31 KRFQDSSKKIMNPSFADLPSSLI----EEIMLLLVLKDNIRASAACKSWYEAGVSVRVVD 86
Query: 65 LQPWLFSCHSISHLFDTTHKLKYTIKT--DPRVLHSKIKASKDGWVLFSKANINPSPFLF 122
PWL +LF+ L + + T P + S + S+ GW+L KA+ N
Sbjct: 87 KHPWLMCFPKRGNLFEFRDPLHWKLHTLDLPELAESTVCYSRFGWLLMRKASSN------ 140
Query: 123 ISYNSSPSSLFFYNPFSASIIELPPLHMFSSDKATFSTAPTSLFCTVFVLS-VYYSTRRI 181
+FF+NPFS II LP + + FS PTS C + + V R+
Sbjct: 141 --------DVFFFNPFSRDIISLPMCEL-DFQQIAFSCPPTSDDCVLLAIKFVPGEVNRV 191
Query: 182 CISTCKPGERTWTRHFFDGFYGDLH---GLTYLRGVLYCSFCNNVLGAFRVSTNSWKIYP 238
+STC PG W + F F + L Y R YC L +F S W
Sbjct: 192 TVSTCNPGATKWITNDFPTFLRLFYMQSNLVYRRDRFYCFNAEGTLYSFEPSYREWSYIC 251
Query: 239 HNRIRPTSV----YLYYG--LIESEHEGSLLSVYYDSHRLQWLVFRFDLIKENWVEVNR- 291
+++R V Y++ G + E +G L ++ S+ + + L W E++R
Sbjct: 252 ADKLRCPYVHENQYMWCGKAVFLVEKKGELFVMFTCSNEKPMV---YKLFSMKWKELSRT 308
Query: 292 -LDDRALFLNPSSTSMKLAVDDASELANTIHV--------ECSSSFYKKPEDERLDCPQS 342
LD F++ ++ ++ ++ + N ++ C S + ++ R + P+
Sbjct: 309 TLDGMTFFVSFYNSELR---NNLPWMRNNVYFSRFGYNRKHCVSFSF---DESRYNTPKE 362
Query: 343 FDWILEENPETIVWIQPP 360
++ +E P +WI P
Sbjct: 363 WEQWVELCPPQSLWIDTP 380
>sp|Q1G3I7|FB232_ARATH F-box protein At4g12382 OS=Arabidopsis thaliana GN=At4g12382 PE=2
SV=1
Length = 138
Score = 54.3 bits (129), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 37/137 (27%), Positives = 61/137 (44%), Gaps = 20/137 (14%)
Query: 12 KRSATKSWSNLPPDIVNLIAENLYYYADYADQVRFRTICKSWQSTCVPLKEINLQPWLFS 71
K+ S+++LP ++ +I +L + +R CKSW V ++ + PWL
Sbjct: 3 KKIMNPSFADLPSSLIEVIMSHL----ALKNNIRASAACKSWYEVGVSVRVVEKHPWLIC 58
Query: 72 CHSISHLFDTTHKLKYTIKT--DPRVLHSKIKASKDGWVLFSKANINPSPFLFISYNSSP 129
+LF+ L + + T P + S + S+ GW+L KA +
Sbjct: 59 FPKRGNLFEFRDPLHWKLYTLGLPELAESTVCYSRFGWLLMRKA--------------TS 104
Query: 130 SSLFFYNPFSASIIELP 146
+FF+NPFS II LP
Sbjct: 105 KDVFFFNPFSRDIISLP 121
>sp|O80603|FB1_ARATH F-box protein At1g10110 OS=Arabidopsis thaliana GN=At1g10110 PE=2
SV=1
Length = 399
Score = 44.7 bits (104), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 43/161 (26%), Positives = 67/161 (41%), Gaps = 28/161 (17%)
Query: 15 ATKSWSNLPPDIVNLIAENLYYYADYADQVRFRTICKSW---QSTCVPLKEINLQPWLFS 71
T +WS L DI++L+ ++L + D R +T+C SW + P K N PWL
Sbjct: 7 GTPNWSELVTDILSLVFKHL----SFTDFARAKTVCSSWYFASKSSSPRK--NHTPWLI- 59
Query: 72 CHSISH--LFDTTHKLKYTIKTDPRVLHSKIKASKDGWVLFSKANINPSPFLFISYNSSP 129
+ +H +F++ + Y R + AS WVL IN
Sbjct: 60 LYQDTHWLMFNSDEEKFYRTVYLGRFAECRGVASCGSWVLVFDKEIN------------- 106
Query: 130 SSLFFYNPFSASIIELPPLHMFSSDKATFSTAPTSLFCTVF 170
+ NPF+ +I LPPL +S+ F +F +F
Sbjct: 107 --FYIINPFTPQLIRLPPLE-YSNTGTKFERPGNYVFHLLF 144
>sp|Q9C6X9|FB315_ARATH Probable F-box protein At1g44080 OS=Arabidopsis thaliana
GN=At1g44080 PE=4 SV=1
Length = 347
Score = 42.4 bits (98), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 78/325 (24%), Positives = 130/325 (40%), Gaps = 45/325 (13%)
Query: 18 SWSNLPPDIVNLIAENLYYYADYADQVRFRTICKSWQSTCVPLKEINLQPWLFSCHSISH 77
WS+L D+++L+A NL + + +RFR+ICK W+ST K + H+
Sbjct: 5 GWSDLHEDLIDLLANNL---SSNINLLRFRSICKPWRSTVATKKRL---------HNHFE 52
Query: 78 LFDTTHKLKYTIKTDPRVLHSKIKA--SKDGWVLFSKANINPSPFLFISYNSSPSSLFFY 135
T K K T+ + + + GW++ ++ S + SP S
Sbjct: 53 RNLPTFKKKKTVVSPSTFFRVTLPSPCRNKGWLIKNRQVSESSKNNLL----SPLSGKTI 108
Query: 136 NPFSASIIELPPLHMF--SSDKATFSTAPTSLFCTVFVLSVYYSTRRICISTCKPGERT- 192
P S ++L + F SS F+ + +F V + C CK GE T
Sbjct: 109 TP-SDKTLDLLKVECFRDSSILQLFADSDRVVFLDNVFFVVDFKNEIWC---CKSGEETR 164
Query: 193 -WTRHFFDGFYGDLHGLTYLRGVLYCSFCNNVLGA-FRVSTNSWKIYPHNRIRPTSVYLY 250
WTR + G L + + +G +Y ++ GA + +S + IY + P Y
Sbjct: 165 HWTRINNEEAKGFLDIILH-KGKIYAL---DLTGAIWWISLSELSIYQYGPSTPVDFYEI 220
Query: 251 YGLIES---EHEGSLLSVY-----------YDSHRLQWLVFRFDLIKENWVEVNRLDDRA 296
E E+ G L V+ + + V++ D WVEV+ L D+A
Sbjct: 221 DNCKEKRLVEYCGELCVVHRFYKKFCVKRVLTERTVCFKVYKMDKNLVEWVEVSSLGDKA 280
Query: 297 LFLNPSSTSMKLAVDDASELANTIH 321
L + + + LA + L N I+
Sbjct: 281 LIVATDNCFLVLASEYYGCLENAIY 305
>sp|Q1PEZ8|FB117_ARATH F-box protein At2g26160 OS=Arabidopsis thaliana GN=At2g26160 PE=2
SV=1
Length = 331
Score = 42.4 bits (98), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 76/330 (23%), Positives = 123/330 (37%), Gaps = 45/330 (13%)
Query: 19 WSNLPPDIVNLIAENLYYYADYADQVRFRTICKSWQSTCVPLKEINLQPWLFSCHSISHL 78
WS LP D++NL A ++ +D +R R+ICK W+S P F C+
Sbjct: 6 WSELPGDLINLTANR---FSSISDVLRVRSICKPWRSAAAT-------PKSFQCN----- 50
Query: 79 FDTTHKLKYTIKTDPRVLH--SKIKASKDGWVLFSK-----ANIN-PSPFLFISYNSSPS 130
+++K+ T+ + S GW++ +K + IN SPF S
Sbjct: 51 LPSSNKMIETVLSPTTFFRVTGPSSCSYKGWLIRTKQVSESSKINLLSPFFRQLLTPSQQ 110
Query: 131 SLFFYNPFSASIIELPPLHMFSS---DKATFSTAPTSLFCTVFVLS--VYYSTRRICIST 185
+L + I + +H+F P+ + V L ++ + I
Sbjct: 111 TLDLLKFEVSEIRQSYEIHIFDKYLIQGVIGKEGPSHILSRVVFLDNLIFAVGQDDKIWC 170
Query: 186 CKPGE---RTWTR------HFFDGFY--GDLHGLTYLRGVLYCSFCNNVLGAFRVST-NS 233
CK GE R WT+ F D G ++ L + + S L F S
Sbjct: 171 CKSGEESSRIWTKIKNQVEDFLDIILHKGQVYALDLTGAIWWISLSPLSLLQFTPSIPMD 230
Query: 234 WKIYPHNRIRPTSVYLYYGLIESEHEGSLLSVYY--DSHRLQWLVFRFDLIKENWVEVNR 291
+ Y R Y G + H+ L Y + + V++ D WVEV
Sbjct: 231 YDGYDSCNKRLVE---YCGDLCIIHQLRLKKAYIRRSQRTVGFKVYKMDEYVAKWVEVRS 287
Query: 292 LDDRALFLNPSSTSMKLAVDDASELANTIH 321
L D+AL + S +A + L N+I+
Sbjct: 288 LGDKALIVARDSCFTVVASEYHGCLNNSIY 317
>sp|Q9ZUF1|FB99_ARATH F-box protein At2g05970 OS=Arabidopsis thaliana GN=At2g05970 PE=2
SV=1
Length = 377
Score = 40.8 bits (94), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 73/326 (22%), Positives = 118/326 (36%), Gaps = 49/326 (15%)
Query: 11 MKRSATKSWSNLPPDIVNLIAENLYYYADYADQVRFRTICKSWQST---CVPLKEINLQP 67
++ + SWS L PD++ + E L ++D R R++C SW S CVP + N P
Sbjct: 2 IETNKKASWSELCPDVLRCVFELL----SFSDLNRTRSVCSSWHSASRHCVPTQ--NQIP 55
Query: 68 WLFSCHSISHLFDTTHKLKYTIKTDPRVLHSKIKASKDGWVLFSKANINPSPFLFISYNS 127
WL + + + + D L+ +KD V F +N + +I
Sbjct: 56 WLILFPRNNVNNNNNNSCVLFVPDDRDSLYK----TKDLGVGFMLSNCLATYGSWILMMD 111
Query: 128 SPSSLFFYNPFSASIIELPPL-----HMFSSDKATFSTAPTSLFCTVFVLSVYYSTRRIC 182
+L NP + I+LP + SS + T + V+ + +
Sbjct: 112 RLCNLNILNPLTGEKIDLPRTKFDLPRLESSVACLWIDEKTKDYIVVWKI-------KNS 164
Query: 183 ISTCKPGERTWTRHFFDGFYGDLHGLTYLRGV--LYCSFCNNVLGAFRVSTNSWKIYPHN 240
+ K G TW + F + + Y LY F ++ L +R+S N
Sbjct: 165 LVYAKKGNHTWQQVFSMNEELSVEQIVYEHKTQKLYVHFNDSTLSIWRLSREDPHGVFEN 224
Query: 241 RI------------RPTSVYLYY----------GLIESEHEGSLLSVYYDSHRLQWLVFR 278
I R T LY L S + SV S R + +++
Sbjct: 225 YIPFDFVFQDFLPDRRTDEELYVKEYIDTRLNIALTTSGELLKVASVVQKSKRWLFRIYK 284
Query: 279 FDLIKENWVEVNRLDDRALFLNPSST 304
+ IK W + L D AL L+ T
Sbjct: 285 MNYIKRRWERIESLGDEALILDMGIT 310
>sp|Q3EBY8|FB111_ARATH F-box protein At2g17690 OS=Arabidopsis thaliana GN=At2g17690 PE=2
SV=1
Length = 421
Score = 40.4 bits (93), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 18/39 (46%), Positives = 26/39 (66%), Gaps = 3/39 (7%)
Query: 19 WSNLPPDIVNLIAENLYYYADYADQVRFRTICKSWQSTC 57
WS LP +++ LIA LY + +RFR+ICKSW+S+
Sbjct: 4 WSKLPEELLGLIALRLYSVIEL---IRFRSICKSWRSSA 39
>sp|Q9FLP7|FB294_ARATH Putative F-box protein At5g55150 OS=Arabidopsis thaliana
GN=At5g55150 PE=4 SV=2
Length = 360
Score = 40.0 bits (92), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 69/323 (21%), Positives = 122/323 (37%), Gaps = 71/323 (21%)
Query: 16 TKSWSNLPPDIVNLIAENLYYYADYADQVRFRTICKSWQ-STCVPLKEINLQPWLFSCHS 74
+ SWS P+++N + NL D D + T+C SW+ S+ P+LF
Sbjct: 5 SSSWSEFLPELLNTVFHNL---NDARDILNCATVCSSWKDSSSAVYYSRTFSPFLF---- 57
Query: 75 ISHLFDTTHKLKYTIKTDPRVLHSK---IKASKDGWVLFSKANINPSPFLFISYNSSPSS 131
ISHL + +++++ + RVL ++ WV S
Sbjct: 58 ISHL-SSNEEIRFSDQF--RVLSPGKLGFSGNQQAWVC-----------------GSTLG 97
Query: 132 LFFYNPFSASIIELPPLHMFSSDKATF------------------STAPTSLFCTVFVLS 173
P + S+ LPPL F + + + TSL +V+
Sbjct: 98 FLLTKPVTKSVTSLPPLISFEDVQRLLQSQAIIPDSEALKNFIKKAVSSTSLLDDEWVVL 157
Query: 174 VYYSTRRICISTCKPGERTWTRHFFDGFYGDLHGLTYLRGVLYCSFCNNVLGAF---RVS 230
V Y+T R ++ C+ G++ WT + + + + GV F + LG +S
Sbjct: 158 VIYNTDRK-LAFCRRGDKQWTD--LESVASSVDDIVFCNGVF---FAIDRLGEIYHCELS 211
Query: 231 TNSWKIYPHNRIRPTSVYLYYGLIESEHEGSLLSVYYDSHRLQ----------WLVFRFD 280
N+ K P + TS + Y + E ++ +L+ + ++ F+
Sbjct: 212 ANNPKATP---LCSTSPFRYDSCKKYLAESDYDELWVVLKKLELNDDCDFETSFEIYEFN 268
Query: 281 LIKENWVEVNRLDDRALFLNPSS 303
W +V L +ALFL+P
Sbjct: 269 RETNEWTKVMSLRGKALFLSPQG 291
>sp|O65451|FB333_ARATH Probable F-box protein At4g22030 OS=Arabidopsis thaliana
GN=At4g22030 PE=4 SV=1
Length = 626
Score = 39.3 bits (90), Expect = 0.047, Method: Compositional matrix adjust.
Identities = 21/63 (33%), Positives = 31/63 (49%), Gaps = 4/63 (6%)
Query: 8 RRNMKRSATKSWSNLPPDIVNLIAENLYYYADYADQVRFRTICKSWQSTCVPLKEINLQP 67
R ++ R SWS LP D++N++ E L +AD R +++C SW N P
Sbjct: 399 RSSLSRFDGSSWSKLPSDLLNMVFERL----GFADFQRAKSVCPSWLDASRQSASKNQIP 454
Query: 68 WLF 70
WL
Sbjct: 455 WLI 457
>sp|Q9SUG4|FB241_ARATH Putative F-box protein At4g22170 OS=Arabidopsis thaliana
GN=At4g22170 PE=4 SV=2
Length = 363
Score = 38.9 bits (89), Expect = 0.060, Method: Compositional matrix adjust.
Identities = 52/211 (24%), Positives = 84/211 (39%), Gaps = 49/211 (23%)
Query: 12 KRSATKSWSNLPPDIVNLIAENLYYYADYADQVRFRTICKSWQST---CVPLKEINLQPW 68
++ SWS+LP D++NL+ E L +A+ R R++C SW S VP +I+ W
Sbjct: 3 RKHNPNSWSDLPHDLLNLVFERL----SFANFNRARSVCSSWYSASRQSVPKNQIH---W 55
Query: 69 LF--------SCHSISHLF--DTTHKLKYTIKTDPRVLHSKIKASKDGWVLFSKANINPS 118
L +S LF D KL T D S +A+ W L ++P
Sbjct: 56 LILFPEDNNNKNNSSCTLFNPDEKDKLYKTQHLDEEFAKSVCRATYGSWFLM----VDP- 110
Query: 119 PFLFISYNSSPSSLFFYNPFSASIIELPPLHMFSSD-------KATFSTAPTSLFCTVFV 171
LF +L+ N F+ I L P+ + D + + ++ VF
Sbjct: 111 --LF--------NLYILNLFTRERINLHPVELLWKDYELGVSSRNRMKSRGGNVRSPVFW 160
Query: 172 LS-------VYYSTRRICISTCKPGERTWTR 195
+ V + R C+ K G+ +W +
Sbjct: 161 IDEITKDYVVLWGLRDWCVFYSKKGDTSWNQ 191
>sp|Q9SHX9|FB72_ARATH Putative F-box protein At1g65770 OS=Arabidopsis thaliana
GN=At1g65770 PE=4 SV=1
Length = 360
Score = 38.9 bits (89), Expect = 0.072, Method: Compositional matrix adjust.
Identities = 17/39 (43%), Positives = 26/39 (66%), Gaps = 3/39 (7%)
Query: 19 WSNLPPDIVNLIAENLYYYADYADQVRFRTICKSWQSTC 57
WS LP D++N+IA L+ + RFR+IC+SW+S+
Sbjct: 4 WSTLPVDLLNMIAGRLFSNIELK---RFRSICRSWRSSV 39
>sp|O49315|FB123_ARATH Putative F-box protein At2g33200 OS=Arabidopsis thaliana
GN=At2g33200 PE=4 SV=1
Length = 376
Score = 38.5 bits (88), Expect = 0.096, Method: Compositional matrix adjust.
Identities = 38/131 (29%), Positives = 52/131 (39%), Gaps = 18/131 (13%)
Query: 19 WSNLPPDIVNLIAENLYYYADYADQVRFRTICKSWQSTCVPLKEINLQPWLFSCHSISHL 78
WS L DI+ LI E+L+ Y D R RT+C +W + K L PW + IS
Sbjct: 8 WSKLCHDILRLILESLH----YKDYHRARTVCSNWYTASTTCKR-PLYPWRIKFNKIS-- 60
Query: 79 FDTTHKLKYTIKTDPRVLHSKIKASKDGWVLFSKANINPSPFLFISYNSSPSSLFFYNPF 138
T DPR KI + + FS N+ S + S + N F
Sbjct: 61 ---------TSLFDPR--EDKIHEIQHPGIEFSDRNVLASCSNWFLMVDSGLEFYLLNAF 109
Query: 139 SASIIELPPLH 149
+ I LP +
Sbjct: 110 TRERINLPSME 120
>sp|Q9LS04|FB187_ARATH Putative F-box protein At3g25750 OS=Arabidopsis thaliana
GN=At3g25750 PE=4 SV=2
Length = 362
Score = 37.7 bits (86), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 18/44 (40%), Positives = 27/44 (61%), Gaps = 3/44 (6%)
Query: 19 WSNLPPDIVNLIAENLYYYADYADQVRFRTICKSWQSTCVPLKE 62
WS+LP ++++LIA Y+ D +R R+ CKSW+S KE
Sbjct: 6 WSDLPEELLDLIANR---YSSNIDVLRIRSTCKSWRSAVAMSKE 46
>sp|Q3EBZ2|SKI23_ARATH F-box protein SKIP23 OS=Arabidopsis thaliana GN=SKIP23 PE=1 SV=1
Length = 407
Score = 37.4 bits (85), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 16/41 (39%), Positives = 27/41 (65%), Gaps = 3/41 (7%)
Query: 19 WSNLPPDIVNLIAENLYYYADYADQVRFRTICKSWQSTCVP 59
WS LP D+++LI+++L D ++FR++C SW+S P
Sbjct: 4 WSTLPKDLLDLISKSL---ESSFDLIQFRSVCSSWRSAAEP 41
Score = 32.3 bits (72), Expect = 6.5, Method: Compositional matrix adjust.
Identities = 17/48 (35%), Positives = 28/48 (58%)
Query: 264 SVYYDSHRLQWLVFRFDLIKENWVEVNRLDDRALFLNPSSTSMKLAVD 311
+ Y + +++ V+RF +E+WV+V L+D+ LFL ST A D
Sbjct: 283 AFYMNERTVKFKVYRFVEREESWVDVYDLEDKMLFLGDDSTFSASASD 330
>sp|O49624|FB242_ARATH Putative F-box protein At4g22180 OS=Arabidopsis thaliana
GN=At4g22180 PE=4 SV=3
Length = 402
Score = 36.6 bits (83), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 36/150 (24%), Positives = 61/150 (40%), Gaps = 23/150 (15%)
Query: 4 NRRSRRNMKRSATKSWSNLPPDIVNLIAENLYYYADYADQVRFRTICKSWQSTCVPLKEI 63
N S + ++ SWS LP D++ + E L YA+ R +++C SW S I
Sbjct: 6 NPSSPKRLRGDTPNSWSELPLDLLTAVFERL----SYANFQRAKSVCSSWHSGSRQSVPI 61
Query: 64 NLQPWL-----FSCHSISHLFDTTHKLKYTIKTDPRVLHSKIKASKDGWVLFSKANINPS 118
+ PWL + ++ LF+ K ++ KD V FSK+ +
Sbjct: 62 QI-PWLILFPEYDNNNSCTLFNPEEK-------------GQVYKMKDLGVEFSKSVCTAT 107
Query: 119 PFLFISYNSSPSSLFFYNPFSASIIELPPL 148
++ +L+ N F+ + LPP
Sbjct: 108 YGSWLLMRDPLYNLYILNLFTHERVNLPPF 137
>sp|Q9XIR1|FBK27_ARATH F-box/kelch-repeat protein At1g64840 OS=Arabidopsis thaliana
GN=At1g64840 PE=2 SV=2
Length = 384
Score = 35.8 bits (81), Expect = 0.52, Method: Compositional matrix adjust.
Identities = 17/39 (43%), Positives = 27/39 (69%), Gaps = 3/39 (7%)
Query: 18 SWSNLPPDIVNLIAENLYYYADYADQVRFRTICKSWQST 56
+WS LP +++NLI++NL + D V R+IC+SW+S
Sbjct: 4 NWSQLPEELLNLISKNL---DNCFDVVHARSICRSWRSA 39
>sp|P0C2F5|Y1657_ARATH Uncharacterized protein At1g65760 OS=Arabidopsis thaliana
GN=At1g65760 PE=2 SV=1
Length = 362
Score = 35.8 bits (81), Expect = 0.63, Method: Compositional matrix adjust.
Identities = 17/49 (34%), Positives = 29/49 (59%), Gaps = 3/49 (6%)
Query: 19 WSNLPPDIVNLIAENLYYYADYADQVRFRTICKSWQSTCVPLKEINLQP 67
WSNLP +++++I L+ + RFR+IC+SW+S+ + N P
Sbjct: 6 WSNLPEELLHMIVLLLFSVVELK---RFRSICRSWRSSTSGVNRNNPFP 51
>sp|Q9ZPS0|FBX7_ARATH F-box only protein 7 OS=Arabidopsis thaliana GN=FBX7 PE=2 SV=3
Length = 395
Score = 35.4 bits (80), Expect = 0.69, Method: Compositional matrix adjust.
Identities = 46/190 (24%), Positives = 68/190 (35%), Gaps = 42/190 (22%)
Query: 6 RSRRNMKRSATKSWSNLPPDIVNLIAENLYYYADYADQVRFRTICKSWQSTCVPLKEINL 65
+ K S WS L PDI+ I E+L D R + +C W S + L
Sbjct: 9 KKEETQKMSENHDWSKLCPDILRKIIESL----SSLDFYRAKIVCSDWYSVWKTCVKRPL 64
Query: 66 QPWLFSCHSISHLFDTTHKLKYTIKT-----DP---RVLHSKIKASKDGWVLFSKANINP 117
+PW ++ KY I T DP ++ + + S + + L S N
Sbjct: 65 RPW-----------RIIYRAKYYISTSLMLFDPDEDKIYKNLVGVSDESYRLASSGN--- 110
Query: 118 SPFLFISYNSSPSSLFFYNPFSASIIELPPLHMFSSDKATFSTAPTSLFCTVFVLSVY-Y 176
++ S + N + I LPP+ K + A FV S Y Y
Sbjct: 111 ----WLLMADSRLDFYIVNLLTGKRINLPPME----SKIRGAQAR-------FVQSKYFY 155
Query: 177 STRRICISTC 186
+R IC C
Sbjct: 156 KSRYICFDNC 165
>sp|Q9ZUH0|FBK35_ARATH F-box/kelch-repeat protein At2g24250 OS=Arabidopsis thaliana
GN=At2g24250 PE=2 SV=2
Length = 374
Score = 35.4 bits (80), Expect = 0.70, Method: Compositional matrix adjust.
Identities = 16/43 (37%), Positives = 28/43 (65%), Gaps = 2/43 (4%)
Query: 14 SATKSWSNLPPDIVNLIAENLYYYADYADQVRFRTICKSWQST 56
S WS LP +++++I+ +L + Y D V R++C+SW+ST
Sbjct: 11 SIMPDWSQLPEELLHIISTHLEDH--YFDAVHARSVCRSWRST 51
>sp|O49647|FB246_ARATH Putative F-box protein At4g22660 OS=Arabidopsis thaliana
GN=At4g22660 PE=4 SV=1
Length = 396
Score = 35.4 bits (80), Expect = 0.71, Method: Compositional matrix adjust.
Identities = 35/142 (24%), Positives = 62/142 (43%), Gaps = 16/142 (11%)
Query: 12 KRSATKSWSNLPPDIVNLIAENLYYYADYADQVRFRTICKSWQSTCVPLKEINLQPWLFS 71
K +WS+LP D++NL+ + L +A+ + +++C SW S N PWL
Sbjct: 3 KNQNPNTWSDLPLDLLNLVFKRL----SFANFRQAKSVCSSWYSASKQSVPKNQIPWLM- 57
Query: 72 CHSISHLF----DTTHKLKYTIKTDPRVLHSKIKASKDGWVLFSKANINPSPFLFISYNS 127
LF + TI +P ++ ++D V F+K+ + ++
Sbjct: 58 ------LFPKDKNNNKNSSCTIFFNPED-KDQLYQTQDLGVEFAKSVCLATYGSWLLMQD 110
Query: 128 SPSSLFFYNPFSASIIELPPLH 149
S +L+ NPF+ I LP +
Sbjct: 111 SKYNLYILNPFTYEKIGLPAIE 132
>sp|Q6DR20|FB110_ARATH F-box protein At2g17036 OS=Arabidopsis thaliana GN=At2g17036 PE=2
SV=1
Length = 404
Score = 35.0 bits (79), Expect = 0.85, Method: Compositional matrix adjust.
Identities = 15/41 (36%), Positives = 26/41 (63%), Gaps = 3/41 (7%)
Query: 19 WSNLPPDIVNLIAENLYYYADYADQVRFRTICKSWQSTCVP 59
W+ LP D+++LI++ L D ++FR++C SW+S P
Sbjct: 4 WATLPKDLLDLISKCL---ESSFDLIQFRSVCSSWRSAAGP 41
>sp|P0CG94|FB347_ARATH Probable F-box protein At4g22165 OS=Arabidopsis thaliana
GN=At4g22165 PE=4 SV=1
Length = 363
Score = 34.7 bits (78), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 77/349 (22%), Positives = 134/349 (38%), Gaps = 79/349 (22%)
Query: 18 SWSNLPPDIVNLIAENLYYYADYADQVRFRTICKSWQST---CVPLKEINLQPWLF---- 70
+WS LP D++NL+ + L + R +++C + S CVP ++I L LF
Sbjct: 9 TWSELPLDLLNLVFKRL----SLVNFQRAKSVCSTRYSVSRQCVPERQIALLI-LFPKED 63
Query: 71 -SCHSISHLFDTTHKLKYTIKTDPRVLHSKIKASKDGWVLFSKANINPSPFLFISYNSSP 129
+ +S LF+ K K+ +D V F+K+ + ++ S
Sbjct: 64 NTDNSTCKLFNPDEK-------------DKLYKMQDLGVEFAKSVCRATYGSWLLMQDSK 110
Query: 130 SSLFFYNPFSASIIELPPLH----------------MFSSDKATFSTA--------PTSL 165
L+ N F+ I LPP+ FS +FS + +
Sbjct: 111 YHLYILNIFTRKRINLPPVESQLGMVKIERTIYDWFHFSHGHYSFSLSSPVFWIDEESKD 170
Query: 166 FCTVFVLSVYYSTRRICISTCKPGERTW-----TRHFFDGFYGDLHGLTYLRGVLYCSFC 220
+ ++ L VY C+ K G+ +W T +F+D Y D H L +L
Sbjct: 171 YIVMWGLGVY------CVVYAKKGDTSWNQIPQTSYFYDMVYKD-HKLYFLSST------ 217
Query: 221 NNVLGAFRVSTNSWKIYPHNRIRPTSVYLYYGLIESEHEGSL--LSVYYDSHRLQWLVFR 278
G F++ S ++ N+ L L+ + +L ++ ++R W
Sbjct: 218 ----GTFQILDFSEEM--DNKTSKVVCLLDRKLVVTVTGKALKVAKMWRPTYR-TWSFRV 270
Query: 279 FDLIKENWVEVNRLDDRALFLNPSSTSMKLAVDDASELANTIHVECSSS 327
F + + +++ L D AL L+ T LA D N+I+ C S
Sbjct: 271 FKISSSGYEKLDSLGDEALLLDLGITV--LASDVEGFKRNSIYFSCRPS 317
>sp|Q9LQB0|FB80_ARATH F-box protein At1g69090 OS=Arabidopsis thaliana GN=At1g69090 PE=4
SV=2
Length = 401
Score = 33.9 bits (76), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 18/51 (35%), Positives = 26/51 (50%), Gaps = 4/51 (7%)
Query: 19 WSNLPPDIVNLIAENLYYYADYADQVRFRTICKSWQSTCVPLKEINLQPWL 69
WS LP D++ L+ E L + D R +++C SWQ K N PW+
Sbjct: 29 WSKLPLDLMQLVFERLAF----LDFERAKSVCSSWQFGSKQSKPNNQIPWM 75
>sp|Q9SIX0|FB106_ARATH Putative F-box protein At2g16290 OS=Arabidopsis thaliana
GN=At2g16290 PE=4 SV=1
Length = 415
Score = 33.5 bits (75), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 17/42 (40%), Positives = 25/42 (59%), Gaps = 3/42 (7%)
Query: 19 WSNLPPDIVNLIAENLYYYADYADQVRFRTICKSWQSTCVPL 60
WS LP D++ LI +L + V FR++C+SW+S PL
Sbjct: 4 WSLLPNDLLELIVGHL---ETSFEIVLFRSVCRSWRSVVPPL 42
>sp|Q9SHY1|FB317_ARATH Probable F-box protein At1g65740 OS=Arabidopsis thaliana
GN=At1g65740 PE=2 SV=2
Length = 371
Score = 33.1 bits (74), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 15/44 (34%), Positives = 25/44 (56%), Gaps = 3/44 (6%)
Query: 19 WSNLPPDIVNLIAENLYYYADYADQVRFRTICKSWQSTCVPLKE 62
WS LP ++++ IA + +Y RF +IC SW S+ +K+
Sbjct: 4 WSTLPEELLHFIAARSFSLVEYK---RFSSICVSWHSSVSGVKK 44
>sp|Q9FKZ7|FB301_ARATH Putative F-box protein At5g66830 OS=Arabidopsis thaliana
GN=At5g66830 PE=4 SV=1
Length = 394
Score = 33.1 bits (74), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 17/60 (28%), Positives = 30/60 (50%), Gaps = 4/60 (6%)
Query: 10 NMKRSATKSWSNLPPDIVNLIAENLYYYADYADQVRFRTICKSWQSTCVPLKEINLQPWL 69
+ +R+ WS LP D++ + + L +AD R +++C SW S + N PW+
Sbjct: 11 DQRRNLDWCWSKLPSDLMQFVFDRL----GFADFQRAKSVCSSWLSVSRNSQPNNQIPWM 66
>sp|Q9FLV8|FK112_ARATH Putative F-box/kelch-repeat protein At5g24040 OS=Arabidopsis
thaliana GN=At5g24040 PE=2 SV=1
Length = 373
Score = 32.7 bits (73), Expect = 4.8, Method: Compositional matrix adjust.
Identities = 36/146 (24%), Positives = 64/146 (43%), Gaps = 28/146 (19%)
Query: 19 WSNLPPDIVNLIAENLYYYADYADQVRFRTICKSWQSTCVPLK---------EINLQPWL 69
WS LPP+I++LI+ + + D + FR++C W+S+ + LK + L P
Sbjct: 4 WSELPPEILHLISLKI---DNPFDLIHFRSVCSFWRSSSL-LKFRHMTSLRCPLPLDPG- 58
Query: 70 FSCHSISHLFDT-THKLKYTIKTDPRVLHSKIKASKDGWVLFSKANINPSPFLFISYNSS 128
C H+ + + LK + P+ K++A ++G V+ LF+ NSS
Sbjct: 59 -GCGDDCHILSSRVYLLKCPNRDRPQYWMFKLQAKENGEVVLHS--------LFLRRNSS 109
Query: 129 PSSLFF----YNPFSASIIELPPLHM 150
+ + + I EL H+
Sbjct: 110 AYGCLYPSLSIDLLNCQIFELAQEHV 135
>sp|Q03M28|CCA_STRTD CCA-adding enzyme OS=Streptococcus thermophilus (strain ATCC
BAA-491 / LMD-9) GN=cca PE=3 SV=1
Length = 402
Score = 32.7 bits (73), Expect = 5.0, Method: Compositional matrix adjust.
Identities = 19/55 (34%), Positives = 30/55 (54%), Gaps = 1/55 (1%)
Query: 15 ATKSWSNLPPDIVNLIAENLYYYADYADQVRFRTICKSWQSTCVPLKEINLQPWL 69
ATK++ LP D E + ADYA+ RF + ++W +T + LK N + +L
Sbjct: 222 ATKAYQYLP-DFQETAEEWQSFVADYAEDFRFTSSEQAWAATLLALKHDNPRSFL 275
>sp|Q5M5P1|CCA_STRT2 CCA-adding enzyme OS=Streptococcus thermophilus (strain ATCC
BAA-250 / LMG 18311) GN=cca PE=3 SV=1
Length = 402
Score = 32.7 bits (73), Expect = 5.0, Method: Compositional matrix adjust.
Identities = 19/55 (34%), Positives = 30/55 (54%), Gaps = 1/55 (1%)
Query: 15 ATKSWSNLPPDIVNLIAENLYYYADYADQVRFRTICKSWQSTCVPLKEINLQPWL 69
ATK++ LP D E + ADYA+ RF + ++W +T + LK N + +L
Sbjct: 222 ATKAYQYLP-DFQETAEEWQSFVADYAEDFRFTSSEQAWAATLLALKHDNPRSFL 275
>sp|Q5M153|CCA_STRT1 CCA-adding enzyme OS=Streptococcus thermophilus (strain CNRZ 1066)
GN=cca PE=3 SV=1
Length = 402
Score = 32.7 bits (73), Expect = 5.0, Method: Compositional matrix adjust.
Identities = 19/55 (34%), Positives = 30/55 (54%), Gaps = 1/55 (1%)
Query: 15 ATKSWSNLPPDIVNLIAENLYYYADYADQVRFRTICKSWQSTCVPLKEINLQPWL 69
ATK++ LP D E + ADYA+ RF + ++W +T + LK N + +L
Sbjct: 222 ATKAYQYLP-DFQETAEEWQSFVADYAEDFRFTSSEQAWAATLLALKHDNPRSFL 275
>sp|Q3EA00|FB235_ARATH Putative F-box protein At4g17565 OS=Arabidopsis thaliana
GN=At4g17565 PE=4 SV=1
Length = 378
Score = 32.0 bits (71), Expect = 7.4, Method: Compositional matrix adjust.
Identities = 20/64 (31%), Positives = 30/64 (46%), Gaps = 9/64 (14%)
Query: 10 NMKRSATKSWSNLPPDIVNLIAENLYYYADYADQVRFRTICKSWQST---CVPLKEINLQ 66
N + WS L PD++ I E L + + R + +C+SW S CVP + N
Sbjct: 9 NRRLRVIPKWSELCPDLLRSIFEQL----SFTNLNRAKLVCRSWNSASRGCVPKR--NQI 62
Query: 67 PWLF 70
PW+
Sbjct: 63 PWMI 66
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.322 0.136 0.438
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 150,805,401
Number of Sequences: 539616
Number of extensions: 6232086
Number of successful extensions: 12218
Number of sequences better than 100.0: 41
Number of HSP's better than 100.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 35
Number of HSP's that attempted gapping in prelim test: 12152
Number of HSP's gapped (non-prelim): 59
length of query: 382
length of database: 191,569,459
effective HSP length: 119
effective length of query: 263
effective length of database: 127,355,155
effective search space: 33494405765
effective search space used: 33494405765
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 62 (28.5 bits)