Query 041774
Match_columns 382
No_of_seqs 234 out of 1419
Neff 8.9
Searched_HMMs 29240
Date Mon Mar 25 18:00:33 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/041774.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/041774hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 1fs1_A SKP2 F-BOX, cyclin A/CD 98.7 4.9E-09 1.7E-13 70.8 2.3 39 16-58 6-44 (53)
2 2xn4_A Kelch-like protein 2; s 98.5 2.7E-05 9.3E-10 71.4 23.9 196 75-293 31-239 (302)
3 3ii7_A Kelch-like protein 7; p 98.5 1E-05 3.6E-10 74.4 20.3 195 75-293 25-235 (306)
4 2vpj_A Kelch-like protein 12; 98.5 2.4E-05 8.1E-10 71.7 22.0 199 75-293 32-241 (301)
5 2woz_A Kelch repeat and BTB do 98.5 0.00017 6E-09 66.6 28.1 201 75-293 25-241 (318)
6 1zgk_A Kelch-like ECH-associat 98.5 2.4E-05 8.1E-10 72.2 20.8 233 39-293 37-297 (308)
7 3ii7_A Kelch-like protein 7; p 98.4 4E-05 1.4E-09 70.4 21.8 200 75-293 71-282 (306)
8 1zgk_A Kelch-like ECH-associat 98.4 2.4E-05 8.4E-10 72.1 19.1 197 75-293 40-250 (308)
9 2vpj_A Kelch-like protein 12; 98.4 5.9E-05 2E-09 69.0 21.2 233 40-293 30-288 (301)
10 4asc_A Kelch repeat and BTB do 98.4 0.00012 4E-09 67.7 23.2 199 75-293 14-231 (315)
11 2xn4_A Kelch-like protein 2; s 98.4 5.8E-05 2E-09 69.2 20.8 197 75-293 78-287 (302)
12 4asc_A Kelch repeat and BTB do 98.3 0.00011 3.7E-09 67.9 21.6 194 76-289 69-283 (315)
13 2woz_A Kelch repeat and BTB do 98.2 7E-05 2.4E-09 69.3 18.9 195 76-289 80-293 (318)
14 2e31_A FBS1, F-box only protei 98.1 8.1E-07 2.8E-11 81.3 3.0 39 17-59 49-88 (297)
15 2uvk_A YJHT; unknown function, 97.7 0.0037 1.3E-07 58.4 19.6 202 75-293 32-304 (357)
16 2ovr_B FBW7, F-BOX/WD repeat p 97.6 0.0032 1.1E-07 60.5 18.4 37 18-58 18-54 (445)
17 2uvk_A YJHT; unknown function, 97.6 0.0029 1E-07 59.1 17.6 165 104-293 18-238 (357)
18 3v7d_B Cell division control p 97.6 0.023 7.8E-07 54.5 23.9 36 19-58 15-50 (464)
19 1p22_A F-BOX/WD-repeat protein 97.3 0.078 2.7E-06 50.5 23.9 36 19-58 11-50 (435)
20 2zwa_A Leucine carboxyl methyl 97.3 0.014 4.8E-07 60.1 18.9 195 77-290 415-642 (695)
21 2ast_B S-phase kinase-associat 97.2 9.1E-05 3.1E-09 68.9 2.2 39 16-58 6-44 (336)
22 3l2o_B F-box only protein 4; s 96.9 0.00013 4.5E-09 66.2 -0.1 39 17-59 3-41 (312)
23 2p1m_B Transport inhibitor res 96.5 0.00073 2.5E-08 67.8 1.9 36 17-56 4-40 (594)
24 3ogk_B Coronatine-insensitive 95.5 0.003 1E-07 63.3 0.9 35 19-56 13-47 (592)
25 2zwa_A Leucine carboxyl methyl 94.1 0.28 9.7E-06 50.3 11.3 102 182-291 413-530 (695)
26 1k3i_A Galactose oxidase precu 93.8 0.38 1.3E-05 48.8 11.6 103 181-289 219-329 (656)
27 1k3i_A Galactose oxidase precu 93.5 0.61 2.1E-05 47.3 12.5 148 77-238 169-330 (656)
28 3hfq_A Uncharacterized protein 62.3 82 0.0028 27.7 17.9 80 206-290 243-326 (347)
29 3hfq_A Uncharacterized protein 61.5 85 0.0029 27.6 13.6 31 207-237 44-78 (347)
30 3sre_A PON1, serum paraoxonase 60.6 64 0.0022 29.7 10.7 74 220-293 81-160 (355)
31 3q7m_A Lipoprotein YFGL, BAMB; 56.0 1.1E+02 0.0039 27.3 12.0 44 188-233 296-339 (376)
32 3scy_A Hypothetical bacterial 54.3 1.2E+02 0.004 26.9 18.9 78 206-289 262-345 (361)
33 2p4o_A Hypothetical protein; p 52.2 60 0.002 28.5 8.9 27 206-232 35-63 (306)
34 1ri6_A Putative isomerase YBHE 44.7 1.5E+02 0.0052 25.5 16.4 80 207-292 235-319 (343)
35 3scy_A Hypothetical bacterial 44.3 72 0.0025 28.3 8.2 85 206-292 214-302 (361)
36 3jro_A Fusion protein of prote 44.2 2.6E+02 0.0089 28.1 15.7 51 182-232 78-133 (753)
37 3jrp_A Fusion protein of prote 43.1 1.7E+02 0.0058 25.5 16.2 51 182-232 80-135 (379)
38 1tl2_A L10, protein (tachylect 40.1 40 0.0014 29.2 5.2 27 204-231 42-69 (236)
39 3lrv_A PRE-mRNA-splicing facto 39.7 1.9E+02 0.0066 25.3 18.3 147 129-288 148-299 (343)
40 2biw_A Apocarotenoid-cleaving 35.1 1.4E+02 0.0047 28.8 8.8 77 204-282 134-220 (490)
41 2z2n_A Virginiamycin B lyase; 35.1 2E+02 0.0068 24.1 12.9 28 205-232 269-296 (299)
42 3dsm_A Uncharacterized protein 33.4 2.5E+02 0.0084 24.6 13.8 30 205-234 86-117 (328)
43 3q7m_A Lipoprotein YFGL, BAMB; 32.7 2.6E+02 0.009 24.7 11.8 12 130-141 249-260 (376)
44 3u4y_A Uncharacterized protein 29.6 2.7E+02 0.0091 23.8 14.9 92 129-233 19-119 (331)
45 2xbg_A YCF48-like protein; pho 29.6 2.9E+02 0.01 24.3 12.7 92 189-290 64-158 (327)
46 2xzh_A Clathrin heavy chain 1; 27.3 90 0.0031 28.8 5.5 57 211-269 270-332 (365)
47 3b7f_A Glycosyl hydrolase, BNR 26.4 3.6E+02 0.012 24.3 11.4 104 183-291 33-155 (394)
48 1rwi_B Serine/threonine-protei 26.2 2.7E+02 0.0094 22.9 18.1 177 75-283 88-266 (270)
49 3npe_A 9-CIS-epoxycarotenoid d 24.4 1.2E+02 0.004 29.7 6.3 79 204-282 173-254 (529)
50 3sjl_D Methylamine dehydrogena 23.3 3.1E+02 0.011 25.3 8.8 83 212-294 237-331 (386)
51 2hqs_A Protein TOLB; TOLB, PAL 23.3 4.2E+02 0.014 24.0 21.1 176 99-291 172-352 (415)
52 1p22_A F-BOX/WD-repeat protein 23.1 4.2E+02 0.014 23.9 15.9 90 130-232 153-243 (435)
53 3dsm_A Uncharacterized protein 22.7 3.8E+02 0.013 23.3 19.3 152 104-288 52-217 (328)
54 3azo_A Aminopeptidase; POP fam 21.7 5.5E+02 0.019 24.7 20.9 145 130-290 217-376 (662)
55 3mbr_X Glutamine cyclotransfer 20.3 2.6E+02 0.0089 24.0 7.0 76 209-292 111-191 (243)
No 1
>1fs1_A SKP2 F-BOX, cyclin A/CDK2-associated P19; F-BOX, LRR, leucine-rich repeat, SCF, ubiquitin, ubiquitin protein ligase; 1.80A {Homo sapiens} SCOP: a.158.1.1 PDB: 1ldk_E
Probab=98.70 E-value=4.9e-09 Score=70.76 Aligned_cols=39 Identities=23% Similarity=0.509 Sum_probs=34.8
Q ss_pred CCCCCCCCHHHHHHHHHHhcCCCCchhhhhhhccCcchhcccc
Q 041774 16 TKSWSNLPPDIVNLIAENLYYYADYADQVRFRTICKSWQSTCV 58 (382)
Q Consensus 16 ~~~Ws~LP~dlL~~Il~rL~~~~~~~d~~rfr~VCk~Wrs~~~ 58 (382)
...|++||+|++..|+.+| +..|+++++.|||+|+.++.
T Consensus 6 ~~~~~~LP~eil~~I~~~L----~~~dl~~~~~Vck~w~~~~~ 44 (53)
T 1fs1_A 6 GVSWDSLPDELLLGIFSCL----CLPELLKVSGVCKRWYRLAS 44 (53)
T ss_dssp ---CCSSCHHHHHHHHTTS----CGGGHHHHHTTCHHHHHHHT
T ss_pred CCCHHHCCHHHHHHHHHcC----CHHHHHHHHHHHHHHHHHhC
Confidence 4589999999999999999 99999999999999999865
No 2
>2xn4_A Kelch-like protein 2; structural protein, cytoskeleton; 1.99A {Homo sapiens}
Probab=98.55 E-value=2.7e-05 Score=71.43 Aligned_cols=196 Identities=13% Similarity=0.103 Sum_probs=122.6
Q ss_pred ceeeeecCCCcEEEecCCCcC-CCCeEEEcCCceEEEEecCCCCCCceeeeccCCCceEEEEcCCCCceeeCCCCcccCc
Q 041774 75 ISHLFDTTHKLKYTIKTDPRV-LHSKIKASKDGWVLFSKANINPSPFLFISYNSSPSSLFFYNPFSASIIELPPLHMFSS 153 (382)
Q Consensus 75 ~~~~~~~~~~~~~~~~l~p~~-~~~~~~gs~~GwL~~~~~~~~~~~~~~~~~~~~~~~~~l~NP~T~~~i~LP~~~~~~~ 153 (382)
....||+.+++|..+...|.. ..+.. ...+|-|++......+ .....+..+||.|+++..+|+++....
T Consensus 31 ~~~~~d~~~~~W~~~~~~p~~r~~~~~-~~~~~~lyv~GG~~~~---------~~~~~~~~~d~~~~~W~~~~~~p~~r~ 100 (302)
T 2xn4_A 31 SVECYDFKEERWHQVAELPSRRCRAGM-VYMAGLVFAVGGFNGS---------LRVRTVDSYDPVKDQWTSVANMRDRRS 100 (302)
T ss_dssp CEEEEETTTTEEEEECCCSSCCBSCEE-EEETTEEEEESCBCSS---------SBCCCEEEEETTTTEEEEECCCSSCCB
T ss_pred cEEEEcCcCCcEeEcccCCcccccceE-EEECCEEEEEeCcCCC---------ccccceEEECCCCCceeeCCCCCcccc
Confidence 345789999988877432432 22222 2346777776442110 113678999999999999987765433
Q ss_pred c--eEEEcCCCCCCCeEEEEEEE-eeCCCeEEEEEEecCCCceEEeecCCcccccceEEEECCEEEEEee--------CC
Q 041774 154 D--KATFSTAPTSLFCTVFVLSV-YYSTRRICISTCKPGERTWTRHFFDGFYGDLHGLTYLRGVLYCSFC--------NN 222 (382)
Q Consensus 154 ~--~v~~s~~p~s~~~~v~~i~~-~~~~~~~~i~~~r~gd~~W~~~~~~~~~~~~~d~v~~~G~~Y~l~~--------~g 222 (382)
. .+++. +. ++++.. ........+..|.+..+.|+.+.....+.....++.++|++|++.. ..
T Consensus 101 ~~~~~~~~------~~-iyv~GG~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~ 173 (302)
T 2xn4_A 101 TLGAAVLN------GL-LYAVGGFDGSTGLSSVEAYNIKSNEWFHVAPMNTRRSSVGVGVVGGLLYAVGGYDVASRQCLS 173 (302)
T ss_dssp SCEEEEET------TE-EEEEEEECSSCEEEEEEEEETTTTEEEEECCCSSCCBSCEEEEETTEEEEECCEETTTTEECC
T ss_pred ceEEEEEC------CE-EEEEcCCCCCccCceEEEEeCCCCeEeecCCCCCcccCceEEEECCEEEEEeCCCCCCCcccc
Confidence 2 22331 22 333332 0111124577899999999988421122334456778999999851 34
Q ss_pred eEEEEEcCCCCeEEeccCCCCCCcceeeceeEEEEeCCcEEEEEEeCCC-ceEEEEEEEcCCCCEEEcccCC
Q 041774 223 VLGAFRVSTNSWKIYPHNRIRPTSVYLYYGLIESEHEGSLLSVYYDSHR-LQWLVFRFDLIKENWVEVNRLD 293 (382)
Q Consensus 223 ~l~~~d~~~~~~~~~~~p~~~~~~~~~~~~~~LVe~~G~LllV~~~~~~-~~~~V~~ld~~~~~W~~v~~Lg 293 (382)
.+..||+..++|+.++..+. +. ....++..+|+|+++.-.... ..-.|+.+|.++.+|.++..+.
T Consensus 174 ~~~~yd~~~~~W~~~~~~p~-~r-----~~~~~~~~~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~~ 239 (302)
T 2xn4_A 174 TVECYNATTNEWTYIAEMST-RR-----SGAGVGVLNNLLYAVGGHDGPLVRKSVEVYDPTTNAWRQVADMN 239 (302)
T ss_dssp CEEEEETTTTEEEEECCCSS-CC-----BSCEEEEETTEEEEECCBSSSSBCCCEEEEETTTTEEEEECCCS
T ss_pred EEEEEeCCCCcEEECCCCcc-cc-----ccccEEEECCEEEEECCCCCCcccceEEEEeCCCCCEeeCCCCC
Confidence 68999999999998853321 11 223456678999998765432 1346888898999999998775
No 3
>3ii7_A Kelch-like protein 7; protein-binding, kelch-repeat, structural genomics, structur genomics consortium, SGC, kelch repeat, nucleus, protein BI; 1.63A {Homo sapiens}
Probab=98.52 E-value=1e-05 Score=74.39 Aligned_cols=195 Identities=10% Similarity=-0.027 Sum_probs=122.2
Q ss_pred ceeeeecCCCcEEEecCCCcCC-CCeEEEcCCceEEEEecCCCCCCceeeeccCCCceEEEEcCCCCceeeCCCCcccCc
Q 041774 75 ISHLFDTTHKLKYTIKTDPRVL-HSKIKASKDGWVLFSKANINPSPFLFISYNSSPSSLFFYNPFSASIIELPPLHMFSS 153 (382)
Q Consensus 75 ~~~~~~~~~~~~~~~~l~p~~~-~~~~~gs~~GwL~~~~~~~~~~~~~~~~~~~~~~~~~l~NP~T~~~i~LP~~~~~~~ 153 (382)
.+..||+.+++|..+...|... .+.. ...+|-|++..... + .....+..+||.|+++..+|+++....
T Consensus 25 ~~~~~d~~~~~W~~~~~~p~~r~~~~~-~~~~~~lyv~GG~~-~---------~~~~~~~~~d~~~~~W~~~~~~p~~r~ 93 (306)
T 3ii7_A 25 SCRYFNPKDYSWTDIRCPFEKRRDAAC-VFWDNVVYILGGSQ-L---------FPIKRMDCYNVVKDSWYSKLGPPTPRD 93 (306)
T ss_dssp SEEEEETTTTEEEECCCCSCCCBSCEE-EEETTEEEEECCBS-S---------SBCCEEEEEETTTTEEEEEECCSSCCB
T ss_pred eEEEecCCCCCEecCCCCCcccceeEE-EEECCEEEEEeCCC-C---------CCcceEEEEeCCCCeEEECCCCCcccc
Confidence 5668999999998774324322 2222 23477777665431 1 124688999999999988887665433
Q ss_pred c--eEEEcCCCCCCCeEEEEEEEee--CCCeEEEEEEecCCCceEEeecCCcccccceEEEECCEEEEEee---------
Q 041774 154 D--KATFSTAPTSLFCTVFVLSVYY--STRRICISTCKPGERTWTRHFFDGFYGDLHGLTYLRGVLYCSFC--------- 220 (382)
Q Consensus 154 ~--~v~~s~~p~s~~~~v~~i~~~~--~~~~~~i~~~r~gd~~W~~~~~~~~~~~~~d~v~~~G~~Y~l~~--------- 220 (382)
. .+++ .+ +++++.... ......+..|.+..+.|+.+.....+.....++..+|++|++..
T Consensus 94 ~~~~~~~------~~-~iyv~GG~~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~ 166 (306)
T 3ii7_A 94 SLAACAA------EG-KIYTSGGSEVGNSALYLFECYDTRTESWHTKPSMLTQRCSHGMVEANGLIYVCGGSLGNNVSGR 166 (306)
T ss_dssp SCEEEEE------TT-EEEEECCBBTTBSCCCCEEEEETTTTEEEEECCCSSCCBSCEEEEETTEEEEECCEESCTTTCE
T ss_pred ceeEEEE------CC-EEEEECCCCCCCcEeeeEEEEeCCCCceEeCCCCcCCcceeEEEEECCEEEEECCCCCCCCccc
Confidence 2 2222 12 233332201 11123467889999999987321122334456778999999862
Q ss_pred -CCeEEEEEcCCCCeEEeccCCCCCCcceeeceeEEEEeCCcEEEEEEeCCC-ceEEEEEEEcCCCCEEEcccCC
Q 041774 221 -NNVLGAFRVSTNSWKIYPHNRIRPTSVYLYYGLIESEHEGSLLSVYYDSHR-LQWLVFRFDLIKENWVEVNRLD 293 (382)
Q Consensus 221 -~g~l~~~d~~~~~~~~~~~p~~~~~~~~~~~~~~LVe~~G~LllV~~~~~~-~~~~V~~ld~~~~~W~~v~~Lg 293 (382)
...+.+||+..++|+.++..+. +. ....++..+|+|+++.-.... ..-.|+.+|.++.+|.++..+.
T Consensus 167 ~~~~~~~yd~~~~~W~~~~~~p~-~r-----~~~~~~~~~~~i~v~GG~~~~~~~~~~~~yd~~~~~W~~~~~~p 235 (306)
T 3ii7_A 167 VLNSCEVYDPATETWTELCPMIE-AR-----KNHGLVFVKDKIFAVGGQNGLGGLDNVEYYDIKLNEWKMVSPMP 235 (306)
T ss_dssp ECCCEEEEETTTTEEEEECCCSS-CC-----BSCEEEEETTEEEEECCEETTEEBCCEEEEETTTTEEEECCCCS
T ss_pred ccceEEEeCCCCCeEEECCCccc-hh-----hcceEEEECCEEEEEeCCCCCCCCceEEEeeCCCCcEEECCCCC
Confidence 3468999999999998863221 11 233456678999888654432 1346788898999999998765
No 4
>2vpj_A Kelch-like protein 12; adaptor protein, WNT signaling pathway, protein-binding, UBI degradation, UBL conjugation pathway, CUL3, kelch repeat; 1.85A {Homo sapiens}
Probab=98.50 E-value=2.4e-05 Score=71.72 Aligned_cols=199 Identities=13% Similarity=0.071 Sum_probs=122.0
Q ss_pred ceeeeecCCCcEEEecCCCcCCCCeEEEcCCceEEEEecCCCCCCceeeeccCCCceEEEEcCCCCc---eeeCCCCccc
Q 041774 75 ISHLFDTTHKLKYTIKTDPRVLHSKIKASKDGWVLFSKANINPSPFLFISYNSSPSSLFFYNPFSAS---IIELPPLHMF 151 (382)
Q Consensus 75 ~~~~~~~~~~~~~~~~l~p~~~~~~~~gs~~GwL~~~~~~~~~~~~~~~~~~~~~~~~~l~NP~T~~---~i~LP~~~~~ 151 (382)
....||+.+++|..+...|...........+|-|++......+ .....++++||.|++ +..+|+++..
T Consensus 32 ~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~~~~l~v~GG~~~~---------~~~~~~~~~d~~~~~~~~W~~~~~~p~~ 102 (301)
T 2vpj_A 32 VVEKYDPKTQEWSFLPSITRKRRYVASVSLHDRIYVIGGYDGR---------SRLSSVECLDYTADEDGVWYSVAPMNVR 102 (301)
T ss_dssp CEEEEETTTTEEEECCCCSSCCBSCEEEEETTEEEEECCBCSS---------CBCCCEEEEETTCCTTCCCEEECCCSSC
T ss_pred EEEEEcCCCCeEEeCCCCChhhccccEEEECCEEEEEcCCCCC---------ccCceEEEEECCCCCCCeeEECCCCCCC
Confidence 3457899999888774324321112223346777766443111 113678999999999 9888877654
Q ss_pred CcceEEEcCCCCCCCeEEEEEEE-eeCCCeEEEEEEecCCCceEEeecCCcccccceEEEECCEEEEEee------CCeE
Q 041774 152 SSDKATFSTAPTSLFCTVFVLSV-YYSTRRICISTCKPGERTWTRHFFDGFYGDLHGLTYLRGVLYCSFC------NNVL 224 (382)
Q Consensus 152 ~~~~v~~s~~p~s~~~~v~~i~~-~~~~~~~~i~~~r~gd~~W~~~~~~~~~~~~~d~v~~~G~~Y~l~~------~g~l 224 (382)
.....+... .+ +++++.. ........+..|.+..++|+.+.....+.....++..+|++|++.. ...+
T Consensus 103 r~~~~~~~~----~~-~lyv~GG~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~ 177 (301)
T 2vpj_A 103 RGLAGATTL----GD-MIYVSGGFDGSRRHTSMERYDPNIDQWSMLGDMQTAREGAGLVVASGVIYCLGGYDGLNILNSV 177 (301)
T ss_dssp CBSCEEEEE----TT-EEEEECCBCSSCBCCEEEEEETTTTEEEEEEECSSCCBSCEEEEETTEEEEECCBCSSCBCCCE
T ss_pred ccceeEEEE----CC-EEEEEcccCCCcccceEEEEcCCCCeEEECCCCCCCcccceEEEECCEEEEECCCCCCcccceE
Confidence 332221111 12 2333332 0111123577899999999987422122334456778999999852 3469
Q ss_pred EEEEcCCCCeEEeccCCCCCCcceeeceeEEEEeCCcEEEEEEeCCC-ceEEEEEEEcCCCCEEEcccCC
Q 041774 225 GAFRVSTNSWKIYPHNRIRPTSVYLYYGLIESEHEGSLLSVYYDSHR-LQWLVFRFDLIKENWVEVNRLD 293 (382)
Q Consensus 225 ~~~d~~~~~~~~~~~p~~~~~~~~~~~~~~LVe~~G~LllV~~~~~~-~~~~V~~ld~~~~~W~~v~~Lg 293 (382)
.+||+...+|+.++..+. +. ....++..+|+|+++.-.... ..-.|+.+|.++.+|.++..+.
T Consensus 178 ~~~d~~~~~W~~~~~~p~-~r-----~~~~~~~~~~~i~v~GG~~~~~~~~~v~~yd~~~~~W~~~~~~p 241 (301)
T 2vpj_A 178 EKYDPHTGHWTNVTPMAT-KR-----SGAGVALLNDHIYVVGGFDGTAHLSSVEAYNIRTDSWTTVTSMT 241 (301)
T ss_dssp EEEETTTTEEEEECCCSS-CC-----BSCEEEEETTEEEEECCBCSSSBCCCEEEEETTTTEEEEECCCS
T ss_pred EEEeCCCCcEEeCCCCCc-cc-----ccceEEEECCEEEEEeCCCCCcccceEEEEeCCCCcEEECCCCC
Confidence 999999999998853221 11 233456678999888765432 1346788898999999998764
No 5
>2woz_A Kelch repeat and BTB domain-containing protein 10; protein binding, invasion and metastasis, UBL conjugation pathway, UBL protein folding; 2.00A {Rattus norvegicus}
Probab=98.50 E-value=0.00017 Score=66.55 Aligned_cols=201 Identities=14% Similarity=0.135 Sum_probs=122.4
Q ss_pred ceeeeecCCCcEEEecCCCc-CCCC-eEEEcCCceEEEEecCC-CCCCceeeeccCCCceEEEEcCCCCceeeCCCCccc
Q 041774 75 ISHLFDTTHKLKYTIKTDPR-VLHS-KIKASKDGWVLFSKANI-NPSPFLFISYNSSPSSLFFYNPFSASIIELPPLHMF 151 (382)
Q Consensus 75 ~~~~~~~~~~~~~~~~l~p~-~~~~-~~~gs~~GwL~~~~~~~-~~~~~~~~~~~~~~~~~~l~NP~T~~~i~LP~~~~~ 151 (382)
....||+.+++|..... |. .++. ..+...+|-|++..... ++... -......+..+||.|+++..+|+++..
T Consensus 25 ~~~~yd~~~~~W~~~~~-~~~~~r~~~~~~~~~~~lyv~GG~~~~~~~~----~~~~~~~~~~~d~~~~~W~~~~~~p~~ 99 (318)
T 2woz_A 25 AAVAYDPMENECYLTAL-AEQIPRNHSSIVTQQNQVYVVGGLYVDEENK----DQPLQSYFFQLDNVSSEWVGLPPLPSA 99 (318)
T ss_dssp EEEEEETTTTEEEEEEE-CTTSCSSEEEEECSSSCEEEEESSCC-----------CCCBEEEEEETTTTEEEECSCBSSC
T ss_pred ceEEECCCCCceecccC-CccCCccceEEEEECCEEEEECCcccCcccc----CCCccccEEEEeCCCCcEEECCCCCcc
Confidence 45689999999877544 32 2222 22344577777765420 00000 000023478999999999999887654
Q ss_pred Ccc--eEEEcCCCCCCCeEEEEEEEee--CC-CeEEEEEEecCCCceEEeecCCcccccceEEEECCEEEEEee------
Q 041774 152 SSD--KATFSTAPTSLFCTVFVLSVYY--ST-RRICISTCKPGERTWTRHFFDGFYGDLHGLTYLRGVLYCSFC------ 220 (382)
Q Consensus 152 ~~~--~v~~s~~p~s~~~~v~~i~~~~--~~-~~~~i~~~r~gd~~W~~~~~~~~~~~~~d~v~~~G~~Y~l~~------ 220 (382)
... .+++ .+. +.++.... .. ....+..|.+..++|+.+.....+.....++..+|++|++..
T Consensus 100 r~~~~~~~~------~~~-iyv~GG~~~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~ 172 (318)
T 2woz_A 100 RCLFGLGEV------DDK-IYVVAGKDLQTEASLDSVLCYDPVAAKWSEVKNLPIKVYGHNVISHNGMIYCLGGKTDDKK 172 (318)
T ss_dssp BCSCEEEEE------TTE-EEEEEEEBTTTCCEEEEEEEEETTTTEEEEECCCSSCEESCEEEEETTEEEEECCEESSSC
T ss_pred ccccceEEE------CCE-EEEEcCccCCCCcccceEEEEeCCCCCEeECCCCCCcccccEEEEECCEEEEEcCCCCCCC
Confidence 332 2223 122 33333201 11 124577889999999987421112233456779999999862
Q ss_pred -CCeEEEEEcCCCCeEEeccCCCCCCcceeeceeEEEEeCCcEEEEEEeCCC-ceEEEEEEEcCCCCEEEcccCC
Q 041774 221 -NNVLGAFRVSTNSWKIYPHNRIRPTSVYLYYGLIESEHEGSLLSVYYDSHR-LQWLVFRFDLIKENWVEVNRLD 293 (382)
Q Consensus 221 -~g~l~~~d~~~~~~~~~~~p~~~~~~~~~~~~~~LVe~~G~LllV~~~~~~-~~~~V~~ld~~~~~W~~v~~Lg 293 (382)
...+..||+..++|+.++..+. +. ...-.+..+|+|+++.-.... ..-.|+.+|.++.+|.++..+.
T Consensus 173 ~~~~~~~yd~~~~~W~~~~~~p~-~r-----~~~~~~~~~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~p 241 (318)
T 2woz_A 173 CTNRVFIYNPKKGDWKDLAPMKT-PR-----SMFGVAIHKGKIVIAGGVTEDGLSASVEAFDLKTNKWEVMTEFP 241 (318)
T ss_dssp BCCCEEEEETTTTEEEEECCCSS-CC-----BSCEEEEETTEEEEEEEEETTEEEEEEEEEETTTCCEEECCCCS
T ss_pred ccceEEEEcCCCCEEEECCCCCC-Cc-----ccceEEEECCEEEEEcCcCCCCccceEEEEECCCCeEEECCCCC
Confidence 2359999999999998863221 11 223356679999999876543 2457888899999999998765
No 6
>1zgk_A Kelch-like ECH-associated protein 1; beta-propeller, kelch repeat motif, protein binding; HET: MSE; 1.35A {Homo sapiens} SCOP: b.68.11.1 PDB: 2flu_X 1u6d_X 1x2j_A 1x2r_A 2dyh_A 2z32_A 3ade_A
Probab=98.45 E-value=2.4e-05 Score=72.19 Aligned_cols=233 Identities=12% Similarity=0.095 Sum_probs=137.2
Q ss_pred CchhhhhhhccCcchhcccc-CCCCCCC-----CCceeecC------C------ceeeeecCCCcEEEecCCCcCCCCeE
Q 041774 39 DYADQVRFRTICKSWQSTCV-PLKEINL-----QPWLFSCH------S------ISHLFDTTHKLKYTIKTDPRVLHSKI 100 (382)
Q Consensus 39 ~~~d~~rfr~VCk~Wrs~~~-~~~~~~~-----~Pwll~~p------~------~~~~~~~~~~~~~~~~l~p~~~~~~~ 100 (382)
.+.++.+|-...+.|..+.. |...... --.++++- . ....||+.+++|..+...|.......
T Consensus 37 ~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~~~~lyv~GG~~~~~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~ 116 (308)
T 1zgk_A 37 SLSYLEAYNPSNGTWLRLADLQVPRSGLAGCVVGGLLYAVGGRNNSPDGNTDSSALDCYNPMTNQWSPCAPMSVPRNRIG 116 (308)
T ss_dssp BCCCEEEEETTTTEEEECCCCSSCCBSCEEEEETTEEEEECCEEEETTEEEECCCEEEEETTTTEEEECCCCSSCCBTCE
T ss_pred CcceEEEEcCCCCeEeECCCCCcccccceEEEECCEEEEECCCcCCCCCCeecceEEEECCCCCeEeECCCCCcCccccE
Confidence 34566677777888988743 2110000 01222221 1 24568898888877643233211122
Q ss_pred EEcCCceEEEEecCCCCCCceeeeccCCCceEEEEcCCCCceeeCCCCcccCcce--EEEcCCCCCCCeEEEEEEE-eeC
Q 041774 101 KASKDGWVLFSKANINPSPFLFISYNSSPSSLFFYNPFSASIIELPPLHMFSSDK--ATFSTAPTSLFCTVFVLSV-YYS 177 (382)
Q Consensus 101 ~gs~~GwL~~~~~~~~~~~~~~~~~~~~~~~~~l~NP~T~~~i~LP~~~~~~~~~--v~~s~~p~s~~~~v~~i~~-~~~ 177 (382)
....+|-|++....... .....+..+||.|.++..+++++...... +++ .+ +++++.. ...
T Consensus 117 ~~~~~~~iyv~GG~~~~---------~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~------~~-~iyv~GG~~~~ 180 (308)
T 1zgk_A 117 VGVIDGHIYAVGGSHGC---------IHHNSVERYEPERDEWHLVAPMLTRRIGVGVAVL------NR-LLYAVGGFDGT 180 (308)
T ss_dssp EEEETTEEEEECCEETT---------EECCCEEEEETTTTEEEECCCCSSCCBSCEEEEE------TT-EEEEECCBCSS
T ss_pred EEEECCEEEEEcCCCCC---------cccccEEEECCCCCeEeECCCCCccccceEEEEE------CC-EEEEEeCCCCC
Confidence 23347777776432100 01357889999999999998776543322 222 12 2333322 011
Q ss_pred CCeEEEEEEecCCCceEEeecCCcccccceEEEECCEEEEEee------CCeEEEEEcCCCCeEEeccCCCCCCcceeec
Q 041774 178 TRRICISTCKPGERTWTRHFFDGFYGDLHGLTYLRGVLYCSFC------NNVLGAFRVSTNSWKIYPHNRIRPTSVYLYY 251 (382)
Q Consensus 178 ~~~~~i~~~r~gd~~W~~~~~~~~~~~~~d~v~~~G~~Y~l~~------~g~l~~~d~~~~~~~~~~~p~~~~~~~~~~~ 251 (382)
.....+..|.+..+.|+.+.....+.....++.++|++|++.. ...+.+||+..++|+.+...+. +. .
T Consensus 181 ~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~v~~yd~~~~~W~~~~~~p~-~r-----~ 254 (308)
T 1zgk_A 181 NRLNSAECYYPERNEWRMITAMNTIRSGAGVCVLHNCIYAAGGYDGQDQLNSVERYDVETETWTFVAPMKH-RR-----S 254 (308)
T ss_dssp CBCCCEEEEETTTTEEEECCCCSSCCBSCEEEEETTEEEEECCBCSSSBCCCEEEEETTTTEEEECCCCSS-CC-----B
T ss_pred CcCceEEEEeCCCCeEeeCCCCCCccccceEEEECCEEEEEeCCCCCCccceEEEEeCCCCcEEECCCCCC-Cc-----c
Confidence 1123567899999999987421122334456778999999962 2469999999999998864332 11 1
Q ss_pred eeEEEEeCCcEEEEEEeCCC-ceEEEEEEEcCCCCEEEcccCC
Q 041774 252 GLIESEHEGSLLSVYYDSHR-LQWLVFRFDLIKENWVEVNRLD 293 (382)
Q Consensus 252 ~~~LVe~~G~LllV~~~~~~-~~~~V~~ld~~~~~W~~v~~Lg 293 (382)
..-++..+|+|+++.-.... ..-.|+.+|.++.+|.++..|.
T Consensus 255 ~~~~~~~~~~i~v~GG~~~~~~~~~v~~yd~~~~~W~~~~~~p 297 (308)
T 1zgk_A 255 ALGITVHQGRIYVLGGYDGHTFLDSVECYDPDTDTWSEVTRMT 297 (308)
T ss_dssp SCEEEEETTEEEEECCBCSSCBCCEEEEEETTTTEEEEEEECS
T ss_pred ceEEEEECCEEEEEcCcCCCcccceEEEEcCCCCEEeecCCCC
Confidence 23355578999888765432 2457888899999999997765
No 7
>3ii7_A Kelch-like protein 7; protein-binding, kelch-repeat, structural genomics, structur genomics consortium, SGC, kelch repeat, nucleus, protein BI; 1.63A {Homo sapiens}
Probab=98.43 E-value=4e-05 Score=70.40 Aligned_cols=200 Identities=12% Similarity=0.095 Sum_probs=121.7
Q ss_pred ceeeeecCCCcEEEecCCCcCCCCeEEEcCCceEEEEecCCCCCCceeeeccCCCceEEEEcCCCCceeeCCCCcccCcc
Q 041774 75 ISHLFDTTHKLKYTIKTDPRVLHSKIKASKDGWVLFSKANINPSPFLFISYNSSPSSLFFYNPFSASIIELPPLHMFSSD 154 (382)
Q Consensus 75 ~~~~~~~~~~~~~~~~l~p~~~~~~~~gs~~GwL~~~~~~~~~~~~~~~~~~~~~~~~~l~NP~T~~~i~LP~~~~~~~~ 154 (382)
....||+.+++|..+...|...........+|-|++......+ ......+..+||.|.++..+|+++.....
T Consensus 71 ~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~--------~~~~~~~~~~d~~~~~W~~~~~~p~~r~~ 142 (306)
T 3ii7_A 71 RMDCYNVVKDSWYSKLGPPTPRDSLAACAAEGKIYTSGGSEVG--------NSALYLFECYDTRTESWHTKPSMLTQRCS 142 (306)
T ss_dssp EEEEEETTTTEEEEEECCSSCCBSCEEEEETTEEEEECCBBTT--------BSCCCCEEEEETTTTEEEEECCCSSCCBS
T ss_pred eEEEEeCCCCeEEECCCCCccccceeEEEECCEEEEECCCCCC--------CcEeeeEEEEeCCCCceEeCCCCcCCcce
Confidence 3456899998887764324322112222346777766442101 01246789999999999988877654332
Q ss_pred eEEEcCCCCCCCeEEEEEEE-eeCCC----eEEEEEEecCCCceEEeecCCcccccceEEEECCEEEEEee------CCe
Q 041774 155 KATFSTAPTSLFCTVFVLSV-YYSTR----RICISTCKPGERTWTRHFFDGFYGDLHGLTYLRGVLYCSFC------NNV 223 (382)
Q Consensus 155 ~v~~s~~p~s~~~~v~~i~~-~~~~~----~~~i~~~r~gd~~W~~~~~~~~~~~~~d~v~~~G~~Y~l~~------~g~ 223 (382)
..+... .+ ++.++.. ..... ...+..|.+.++.|+.+.....+.....++..+|++|++.. ...
T Consensus 143 ~~~~~~----~~-~iyv~GG~~~~~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~~~~i~v~GG~~~~~~~~~ 217 (306)
T 3ii7_A 143 HGMVEA----NG-LIYVCGGSLGNNVSGRVLNSCEVYDPATETWTELCPMIEARKNHGLVFVKDKIFAVGGQNGLGGLDN 217 (306)
T ss_dssp CEEEEE----TT-EEEEECCEESCTTTCEECCCEEEEETTTTEEEEECCCSSCCBSCEEEEETTEEEEECCEETTEEBCC
T ss_pred eEEEEE----CC-EEEEECCCCCCCCcccccceEEEeCCCCCeEEECCCccchhhcceEEEECCEEEEEeCCCCCCCCce
Confidence 211111 12 2333221 01111 23567899999999998421122334557778999999852 346
Q ss_pred EEEEEcCCCCeEEeccCCCCCCcceeeceeEEEEeCCcEEEEEEeCCC-ceEEEEEEEcCCCCEEEcccCC
Q 041774 224 LGAFRVSTNSWKIYPHNRIRPTSVYLYYGLIESEHEGSLLSVYYDSHR-LQWLVFRFDLIKENWVEVNRLD 293 (382)
Q Consensus 224 l~~~d~~~~~~~~~~~p~~~~~~~~~~~~~~LVe~~G~LllV~~~~~~-~~~~V~~ld~~~~~W~~v~~Lg 293 (382)
+.+||+..++|+.++..+. +. ....++..+|+|+++.-.... ..-.|+.+|.++.+|.++..+.
T Consensus 218 ~~~yd~~~~~W~~~~~~p~-~r-----~~~~~~~~~~~i~v~GG~~~~~~~~~~~~yd~~~~~W~~~~~~~ 282 (306)
T 3ii7_A 218 VEYYDIKLNEWKMVSPMPW-KG-----VTVKCAAVGSIVYVLAGFQGVGRLGHILEYNTETDKWVANSKVR 282 (306)
T ss_dssp EEEEETTTTEEEECCCCSC-CB-----SCCEEEEETTEEEEEECBCSSSBCCEEEEEETTTTEEEEEEEEE
T ss_pred EEEeeCCCCcEEECCCCCC-Cc-----cceeEEEECCEEEEEeCcCCCeeeeeEEEEcCCCCeEEeCCCcc
Confidence 8999999999998854322 11 223455668999998875432 2457888999999999987653
No 8
>1zgk_A Kelch-like ECH-associated protein 1; beta-propeller, kelch repeat motif, protein binding; HET: MSE; 1.35A {Homo sapiens} SCOP: b.68.11.1 PDB: 2flu_X 1u6d_X 1x2j_A 1x2r_A 2dyh_A 2z32_A 3ade_A
Probab=98.38 E-value=2.4e-05 Score=72.11 Aligned_cols=197 Identities=12% Similarity=0.080 Sum_probs=120.4
Q ss_pred ceeeeecCCCcEEEecCCCcC-CCCeEEEcCCceEEEEecCC---CCCCceeeeccCCCceEEEEcCCCCceeeCCCCcc
Q 041774 75 ISHLFDTTHKLKYTIKTDPRV-LHSKIKASKDGWVLFSKANI---NPSPFLFISYNSSPSSLFFYNPFSASIIELPPLHM 150 (382)
Q Consensus 75 ~~~~~~~~~~~~~~~~l~p~~-~~~~~~gs~~GwL~~~~~~~---~~~~~~~~~~~~~~~~~~l~NP~T~~~i~LP~~~~ 150 (382)
....||+.+++|..+...|.. ..+.. ...+|-|++..... .+. ...+.+..+||.|+++..+|+++.
T Consensus 40 ~~~~~d~~~~~W~~~~~~p~~r~~~~~-~~~~~~lyv~GG~~~~~~~~--------~~~~~~~~~d~~~~~W~~~~~~p~ 110 (308)
T 1zgk_A 40 YLEAYNPSNGTWLRLADLQVPRSGLAG-CVVGGLLYAVGGRNNSPDGN--------TDSSALDCYNPMTNQWSPCAPMSV 110 (308)
T ss_dssp CEEEEETTTTEEEECCCCSSCCBSCEE-EEETTEEEEECCEEEETTEE--------EECCCEEEEETTTTEEEECCCCSS
T ss_pred eEEEEcCCCCeEeECCCCCcccccceE-EEECCEEEEECCCcCCCCCC--------eecceEEEECCCCCeEeECCCCCc
Confidence 456789999998877432332 12222 23467676664320 000 013578899999999999988765
Q ss_pred cCcc--eEEEcCCCCCCCeEEEEEEE-eeCCCeEEEEEEecCCCceEEeecCCcccccceEEEECCEEEEEee------C
Q 041774 151 FSSD--KATFSTAPTSLFCTVFVLSV-YYSTRRICISTCKPGERTWTRHFFDGFYGDLHGLTYLRGVLYCSFC------N 221 (382)
Q Consensus 151 ~~~~--~v~~s~~p~s~~~~v~~i~~-~~~~~~~~i~~~r~gd~~W~~~~~~~~~~~~~d~v~~~G~~Y~l~~------~ 221 (382)
.... .+++. + +++++.. ........+..|.+..++|+.+.....+.....++..+|++|++.. .
T Consensus 111 ~r~~~~~~~~~------~-~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~ 183 (308)
T 1zgk_A 111 PRNRIGVGVID------G-HIYAVGGSHGCIHHNSVERYEPERDEWHLVAPMLTRRIGVGVAVLNRLLYAVGGFDGTNRL 183 (308)
T ss_dssp CCBTCEEEEET------T-EEEEECCEETTEECCCEEEEETTTTEEEECCCCSSCCBSCEEEEETTEEEEECCBCSSCBC
T ss_pred CccccEEEEEC------C-EEEEEcCCCCCcccccEEEECCCCCeEeECCCCCccccceEEEEECCEEEEEeCCCCCCcC
Confidence 4332 22221 2 2333321 0010112466889999999987421122234456778999999862 3
Q ss_pred CeEEEEEcCCCCeEEeccCCCCCCcceeeceeEEEEeCCcEEEEEEeCCC-ceEEEEEEEcCCCCEEEcccCC
Q 041774 222 NVLGAFRVSTNSWKIYPHNRIRPTSVYLYYGLIESEHEGSLLSVYYDSHR-LQWLVFRFDLIKENWVEVNRLD 293 (382)
Q Consensus 222 g~l~~~d~~~~~~~~~~~p~~~~~~~~~~~~~~LVe~~G~LllV~~~~~~-~~~~V~~ld~~~~~W~~v~~Lg 293 (382)
..+..||+..++|+.++..+. +. .....+..+|+|+++.-.... ..-.|+.+|.++.+|.++..+.
T Consensus 184 ~~~~~yd~~~~~W~~~~~~p~-~r-----~~~~~~~~~~~iyv~GG~~~~~~~~~v~~yd~~~~~W~~~~~~p 250 (308)
T 1zgk_A 184 NSAECYYPERNEWRMITAMNT-IR-----SGAGVCVLHNCIYAAGGYDGQDQLNSVERYDVETETWTFVAPMK 250 (308)
T ss_dssp CCEEEEETTTTEEEECCCCSS-CC-----BSCEEEEETTEEEEECCBCSSSBCCCEEEEETTTTEEEECCCCS
T ss_pred ceEEEEeCCCCeEeeCCCCCC-cc-----ccceEEEECCEEEEEeCCCCCCccceEEEEeCCCCcEEECCCCC
Confidence 469999999999998854321 11 223455668999988765432 2456788898999999998765
No 9
>2vpj_A Kelch-like protein 12; adaptor protein, WNT signaling pathway, protein-binding, UBI degradation, UBL conjugation pathway, CUL3, kelch repeat; 1.85A {Homo sapiens}
Probab=98.37 E-value=5.9e-05 Score=69.02 Aligned_cols=233 Identities=13% Similarity=0.114 Sum_probs=134.8
Q ss_pred chhhhhhhccCcchhcccc-CCCCCC-----CCCceeecCC--------ceeeeecCCCc---EEEecCCCcCCCCeEEE
Q 041774 40 YADQVRFRTICKSWQSTCV-PLKEIN-----LQPWLFSCHS--------ISHLFDTTHKL---KYTIKTDPRVLHSKIKA 102 (382)
Q Consensus 40 ~~d~~rfr~VCk~Wrs~~~-~~~~~~-----~~Pwll~~p~--------~~~~~~~~~~~---~~~~~l~p~~~~~~~~g 102 (382)
..++.+|-..-+.|..+.. |..... .--.++++-. ....||+.+++ |..+...|.........
T Consensus 30 ~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~~~~l~v~GG~~~~~~~~~~~~~d~~~~~~~~W~~~~~~p~~r~~~~~~ 109 (301)
T 2vpj_A 30 IDVVEKYDPKTQEWSFLPSITRKRRYVASVSLHDRIYVIGGYDGRSRLSSVECLDYTADEDGVWYSVAPMNVRRGLAGAT 109 (301)
T ss_dssp CCCEEEEETTTTEEEECCCCSSCCBSCEEEEETTEEEEECCBCSSCBCCCEEEEETTCCTTCCCEEECCCSSCCBSCEEE
T ss_pred eeEEEEEcCCCCeEEeCCCCChhhccccEEEECCEEEEEcCCCCCccCceEEEEECCCCCCCeeEECCCCCCCccceeEE
Confidence 3455666667778877643 211000 0012222211 34578998888 87663323321112223
Q ss_pred cCCceEEEEecCCCCCCceeeeccCCCceEEEEcCCCCceeeCCCCcccCcceEEEcCCCCCCCeEEEEEEEeeCC--Ce
Q 041774 103 SKDGWVLFSKANINPSPFLFISYNSSPSSLFFYNPFSASIIELPPLHMFSSDKATFSTAPTSLFCTVFVLSVYYST--RR 180 (382)
Q Consensus 103 s~~GwL~~~~~~~~~~~~~~~~~~~~~~~~~l~NP~T~~~i~LP~~~~~~~~~v~~s~~p~s~~~~v~~i~~~~~~--~~ 180 (382)
..+|-|++....... .....+..+||.|.++..+|+++.......+... .+ +++++.. ..+ ..
T Consensus 110 ~~~~~lyv~GG~~~~---------~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~----~~-~iyv~GG-~~~~~~~ 174 (301)
T 2vpj_A 110 TLGDMIYVSGGFDGS---------RRHTSMERYDPNIDQWSMLGDMQTAREGAGLVVA----SG-VIYCLGG-YDGLNIL 174 (301)
T ss_dssp EETTEEEEECCBCSS---------CBCCEEEEEETTTTEEEEEEECSSCCBSCEEEEE----TT-EEEEECC-BCSSCBC
T ss_pred EECCEEEEEcccCCC---------cccceEEEEcCCCCeEEECCCCCCCcccceEEEE----CC-EEEEECC-CCCCccc
Confidence 347777776542110 0135789999999999887766543332211111 12 2333322 111 12
Q ss_pred EEEEEEecCCCceEEeecCCcccccceEEEECCEEEEEee------CCeEEEEEcCCCCeEEeccCCCCCCcceeeceeE
Q 041774 181 ICISTCKPGERTWTRHFFDGFYGDLHGLTYLRGVLYCSFC------NNVLGAFRVSTNSWKIYPHNRIRPTSVYLYYGLI 254 (382)
Q Consensus 181 ~~i~~~r~gd~~W~~~~~~~~~~~~~d~v~~~G~~Y~l~~------~g~l~~~d~~~~~~~~~~~p~~~~~~~~~~~~~~ 254 (382)
..+..|.+.++.|+.+.....+.....++..+|++|++.. ...+..||+...+|+.++..+. +. ...-
T Consensus 175 ~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~~~~i~v~GG~~~~~~~~~v~~yd~~~~~W~~~~~~p~-~r-----~~~~ 248 (301)
T 2vpj_A 175 NSVEKYDPHTGHWTNVTPMATKRSGAGVALLNDHIYVVGGFDGTAHLSSVEAYNIRTDSWTTVTSMTT-PR-----CYVG 248 (301)
T ss_dssp CCEEEEETTTTEEEEECCCSSCCBSCEEEEETTEEEEECCBCSSSBCCCEEEEETTTTEEEEECCCSS-CC-----BSCE
T ss_pred ceEEEEeCCCCcEEeCCCCCcccccceEEEECCEEEEEeCCCCCcccceEEEEeCCCCcEEECCCCCC-cc-----ccee
Confidence 3467889999999988421122334457788999999963 3469999999999998864332 11 1223
Q ss_pred EEEeCCcEEEEEEeCCC-ceEEEEEEEcCCCCEEEcccCC
Q 041774 255 ESEHEGSLLSVYYDSHR-LQWLVFRFDLIKENWVEVNRLD 293 (382)
Q Consensus 255 LVe~~G~LllV~~~~~~-~~~~V~~ld~~~~~W~~v~~Lg 293 (382)
.+..+|+|+++.-.... ..-.|+.+|.++.+|.++..+.
T Consensus 249 ~~~~~~~i~v~GG~~~~~~~~~v~~yd~~~~~W~~~~~~~ 288 (301)
T 2vpj_A 249 ATVLRGRLYAIAGYDGNSLLSSIECYDPIIDSWEVVTSMG 288 (301)
T ss_dssp EEEETTEEEEECCBCSSSBEEEEEEEETTTTEEEEEEEEE
T ss_pred EEEECCEEEEEcCcCCCcccccEEEEcCCCCeEEEcCCCC
Confidence 55568998888765432 2467889999999999997654
No 10
>4asc_A Kelch repeat and BTB domain-containing protein 5; protein binding, cytoskeleton; 1.78A {Homo sapiens}
Probab=98.36 E-value=0.00012 Score=67.65 Aligned_cols=199 Identities=10% Similarity=0.099 Sum_probs=121.7
Q ss_pred ceeeeecCCCcEEEecCCCc-CCCC-eEEEcCCceEEEEecCC---CCCCceeeeccCCCceEEEEcCCCCceeeCCCCc
Q 041774 75 ISHLFDTTHKLKYTIKTDPR-VLHS-KIKASKDGWVLFSKANI---NPSPFLFISYNSSPSSLFFYNPFSASIIELPPLH 149 (382)
Q Consensus 75 ~~~~~~~~~~~~~~~~l~p~-~~~~-~~~gs~~GwL~~~~~~~---~~~~~~~~~~~~~~~~~~l~NP~T~~~i~LP~~~ 149 (382)
....||+.+++|....+ |. ..+. ......+|-|++..... .+.. ......+..+||.|+++..+|+++
T Consensus 14 ~~~~yd~~~~~W~~~~~-~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~------~~~~~~~~~~d~~~~~W~~~~~~p 86 (315)
T 4asc_A 14 GAVAYDPAANECYCASL-SSQVPKNHVSLVTKENQVFVAGGLFYNEDNKE------DPMSAYFLQFDHLDSEWLGMPPLP 86 (315)
T ss_dssp EEEEEETTTTEEEEEEC-CCCSCSSEEEEECTTCCEEEEEEEEECSSCSS------SCEEEEEEEEETTTTEEEECCCBS
T ss_pred ceEEECCCCCeEecCCC-CCCCCccceEEEEECCEEEEEcCcccCCCCCc------cccccceEEecCCCCeEEECCCCC
Confidence 45679999999876554 32 1222 22334566666654310 0000 000234789999999999999876
Q ss_pred ccCcc--eEEEcCCCCCCCeEEEEEEEee----CCCeEEEEEEecCCCceEEeecCCcccccceEEEECCEEEEEeeC--
Q 041774 150 MFSSD--KATFSTAPTSLFCTVFVLSVYY----STRRICISTCKPGERTWTRHFFDGFYGDLHGLTYLRGVLYCSFCN-- 221 (382)
Q Consensus 150 ~~~~~--~v~~s~~p~s~~~~v~~i~~~~----~~~~~~i~~~r~gd~~W~~~~~~~~~~~~~d~v~~~G~~Y~l~~~-- 221 (382)
..... .+++ .+ ++.++.... ......+..|.+.+++|+.+..-..+.....++..+|++|++...
T Consensus 87 ~~r~~~~~~~~------~~-~lyv~GG~~~~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~ 159 (315)
T 4asc_A 87 SPRCLFGLGEA------LN-SIYVVGGREIKDGERCLDSVMCYDRLSFKWGESDPLPYVVYGHTVLSHMDLVYVIGGKGS 159 (315)
T ss_dssp SCEESCEEEEE------TT-EEEEECCEESSTTCCBCCCEEEEETTTTEEEECCCCSSCCBSCEEEEETTEEEEECCBCT
T ss_pred cchhceeEEEE------CC-EEEEEeCCcCCCCCcccceEEEECCCCCcEeECCCCCCcccceeEEEECCEEEEEeCCCC
Confidence 54332 2222 12 233322100 111234678899999999874211223344567799999999632
Q ss_pred -----CeEEEEEcCCCCeEEeccCCCCCCcceeeceeEEEEeCCcEEEEEEeCCC-ceEEEEEEEcCCCCEEEcccCC
Q 041774 222 -----NVLGAFRVSTNSWKIYPHNRIRPTSVYLYYGLIESEHEGSLLSVYYDSHR-LQWLVFRFDLIKENWVEVNRLD 293 (382)
Q Consensus 222 -----g~l~~~d~~~~~~~~~~~p~~~~~~~~~~~~~~LVe~~G~LllV~~~~~~-~~~~V~~ld~~~~~W~~v~~Lg 293 (382)
..+..||+...+|+.++..+. +. .....+..+|+|+++.-.... ..-.|+.+|.++.+|.++..+.
T Consensus 160 ~~~~~~~~~~yd~~~~~W~~~~~~p~-~r-----~~~~~~~~~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~p 231 (315)
T 4asc_A 160 DRKCLNKMCVYDPKKFEWKELAPMQT-AR-----SLFGATVHDGRIIVAAGVTDTGLTSSAEVYSITDNKWAPFEAFP 231 (315)
T ss_dssp TSCBCCCEEEEETTTTEEEECCCCSS-CC-----BSCEEEEETTEEEEEEEECSSSEEEEEEEEETTTTEEEEECCCS
T ss_pred CCcccceEEEEeCCCCeEEECCCCCC-ch-----hceEEEEECCEEEEEeccCCCCccceEEEEECCCCeEEECCCCC
Confidence 469999999999998863221 11 233456679999999876543 2457888999999999998764
No 11
>2xn4_A Kelch-like protein 2; structural protein, cytoskeleton; 1.99A {Homo sapiens}
Probab=98.36 E-value=5.8e-05 Score=69.21 Aligned_cols=197 Identities=14% Similarity=0.107 Sum_probs=119.6
Q ss_pred ceeeeecCCCcEEEecCCCcCCCCeEEEcCCceEEEEecCCCCCCceeeeccCCCceEEEEcCCCCceeeCCCCcccCcc
Q 041774 75 ISHLFDTTHKLKYTIKTDPRVLHSKIKASKDGWVLFSKANINPSPFLFISYNSSPSSLFFYNPFSASIIELPPLHMFSSD 154 (382)
Q Consensus 75 ~~~~~~~~~~~~~~~~l~p~~~~~~~~gs~~GwL~~~~~~~~~~~~~~~~~~~~~~~~~l~NP~T~~~i~LP~~~~~~~~ 154 (382)
....||+.+++|..+...|...........+|-+++......+. ....+..+||.|.++..+|+++.....
T Consensus 78 ~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~---------~~~~~~~~d~~~~~W~~~~~~p~~r~~ 148 (302)
T 2xn4_A 78 TVDSYDPVKDQWTSVANMRDRRSTLGAAVLNGLLYAVGGFDGST---------GLSSVEAYNIKSNEWFHVAPMNTRRSS 148 (302)
T ss_dssp CEEEEETTTTEEEEECCCSSCCBSCEEEEETTEEEEEEEECSSC---------EEEEEEEEETTTTEEEEECCCSSCCBS
T ss_pred ceEEECCCCCceeeCCCCCccccceEEEEECCEEEEEcCCCCCc---------cCceEEEEeCCCCeEeecCCCCCcccC
Confidence 34578999988887743233211112223467777664321100 125788999999999988877654332
Q ss_pred e--EEEcCCCCCCCeEEEEEEEe-eCCC--eEEEEEEecCCCceEEeecCCcccccceEEEECCEEEEEee------CCe
Q 041774 155 K--ATFSTAPTSLFCTVFVLSVY-YSTR--RICISTCKPGERTWTRHFFDGFYGDLHGLTYLRGVLYCSFC------NNV 223 (382)
Q Consensus 155 ~--v~~s~~p~s~~~~v~~i~~~-~~~~--~~~i~~~r~gd~~W~~~~~~~~~~~~~d~v~~~G~~Y~l~~------~g~ 223 (382)
. +++ .+ ++.++... .... ...+..|.+.++.|+.+.....+.....++.++|++|++.. ...
T Consensus 149 ~~~~~~------~~-~iyv~GG~~~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~ 221 (302)
T 2xn4_A 149 VGVGVV------GG-LLYAVGGYDVASRQCLSTVECYNATTNEWTYIAEMSTRRSGAGVGVLNNLLYAVGGHDGPLVRKS 221 (302)
T ss_dssp CEEEEE------TT-EEEEECCEETTTTEECCCEEEEETTTTEEEEECCCSSCCBSCEEEEETTEEEEECCBSSSSBCCC
T ss_pred ceEEEE------CC-EEEEEeCCCCCCCccccEEEEEeCCCCcEEECCCCccccccccEEEECCEEEEECCCCCCcccce
Confidence 2 222 12 23333210 1110 12467889999999988421122334457788999999962 246
Q ss_pred EEEEEcCCCCeEEeccCCCCCCcceeeceeEEEEeCCcEEEEEEeCCC-ceEEEEEEEcCCCCEEEcc-cCC
Q 041774 224 LGAFRVSTNSWKIYPHNRIRPTSVYLYYGLIESEHEGSLLSVYYDSHR-LQWLVFRFDLIKENWVEVN-RLD 293 (382)
Q Consensus 224 l~~~d~~~~~~~~~~~p~~~~~~~~~~~~~~LVe~~G~LllV~~~~~~-~~~~V~~ld~~~~~W~~v~-~Lg 293 (382)
+..||+...+|+.++..+.. . ...-++..+|+|+++.-.... ..-.|+.+|.++.+|.++. .|.
T Consensus 222 ~~~yd~~~~~W~~~~~~~~~-r-----~~~~~~~~~~~i~v~GG~~~~~~~~~v~~yd~~~~~W~~~~~~~~ 287 (302)
T 2xn4_A 222 VEVYDPTTNAWRQVADMNMC-R-----RNAGVCAVNGLLYVVGGDDGSCNLASVEYYNPTTDKWTVVSSCMS 287 (302)
T ss_dssp EEEEETTTTEEEEECCCSSC-C-----BSCEEEEETTEEEEECCBCSSSBCCCEEEEETTTTEEEECSSCCS
T ss_pred EEEEeCCCCCEeeCCCCCCc-c-----ccCeEEEECCEEEEECCcCCCcccccEEEEcCCCCeEEECCcccC
Confidence 99999999999988643321 1 122356678999988765432 2346788898899999986 553
No 12
>4asc_A Kelch repeat and BTB domain-containing protein 5; protein binding, cytoskeleton; 1.78A {Homo sapiens}
Probab=98.31 E-value=0.00011 Score=67.86 Aligned_cols=194 Identities=13% Similarity=0.097 Sum_probs=118.2
Q ss_pred eeeeecCCCcEEEecCCCcC-CCCeEEEcCCceEEEEecCC--CCCCceeeeccCCCceEEEEcCCCCceeeCCCCcccC
Q 041774 76 SHLFDTTHKLKYTIKTDPRV-LHSKIKASKDGWVLFSKANI--NPSPFLFISYNSSPSSLFFYNPFSASIIELPPLHMFS 152 (382)
Q Consensus 76 ~~~~~~~~~~~~~~~l~p~~-~~~~~~gs~~GwL~~~~~~~--~~~~~~~~~~~~~~~~~~l~NP~T~~~i~LP~~~~~~ 152 (382)
...||+.+++|..+...|.. ..+. ....+|-|++..... .+. ...+.+..+||.|+++..+++++...
T Consensus 69 ~~~~d~~~~~W~~~~~~p~~r~~~~-~~~~~~~lyv~GG~~~~~~~--------~~~~~~~~~d~~~~~W~~~~~~p~~r 139 (315)
T 4asc_A 69 FLQFDHLDSEWLGMPPLPSPRCLFG-LGEALNSIYVVGGREIKDGE--------RCLDSVMCYDRLSFKWGESDPLPYVV 139 (315)
T ss_dssp EEEEETTTTEEEECCCBSSCEESCE-EEEETTEEEEECCEESSTTC--------CBCCCEEEEETTTTEEEECCCCSSCC
T ss_pred eEEecCCCCeEEECCCCCcchhcee-EEEECCEEEEEeCCcCCCCC--------cccceEEEECCCCCcEeECCCCCCcc
Confidence 34688988888766321321 1222 233467777664420 000 12467899999999999998876543
Q ss_pred cceEEEcCCCCCCCeEEEEEEEe-eC-CCeEEEEEEecCCCceEEeecCCcccccceEEEECCEEEEEee------CCeE
Q 041774 153 SDKATFSTAPTSLFCTVFVLSVY-YS-TRRICISTCKPGERTWTRHFFDGFYGDLHGLTYLRGVLYCSFC------NNVL 224 (382)
Q Consensus 153 ~~~v~~s~~p~s~~~~v~~i~~~-~~-~~~~~i~~~r~gd~~W~~~~~~~~~~~~~d~v~~~G~~Y~l~~------~g~l 224 (382)
....+... .+ ++.++... .. .....+..|.+.+++|+.+..-..+.....++.++|++|++.. ...+
T Consensus 140 ~~~~~~~~----~~-~iyv~GG~~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~ 214 (315)
T 4asc_A 140 YGHTVLSH----MD-LVYVIGGKGSDRKCLNKMCVYDPKKFEWKELAPMQTARSLFGATVHDGRIIVAAGVTDTGLTSSA 214 (315)
T ss_dssp BSCEEEEE----TT-EEEEECCBCTTSCBCCCEEEEETTTTEEEECCCCSSCCBSCEEEEETTEEEEEEEECSSSEEEEE
T ss_pred cceeEEEE----CC-EEEEEeCCCCCCcccceEEEEeCCCCeEEECCCCCCchhceEEEEECCEEEEEeccCCCCccceE
Confidence 33222111 12 23333320 01 1123567889999999987421122334556788999999862 1268
Q ss_pred EEEEcCCCCeEEeccCCCCCCcceeeceeEEEEeCCcEEEEEEeCC----------CceEEEEEEEcCCCCEEEc
Q 041774 225 GAFRVSTNSWKIYPHNRIRPTSVYLYYGLIESEHEGSLLSVYYDSH----------RLQWLVFRFDLIKENWVEV 289 (382)
Q Consensus 225 ~~~d~~~~~~~~~~~p~~~~~~~~~~~~~~LVe~~G~LllV~~~~~----------~~~~~V~~ld~~~~~W~~v 289 (382)
.+||+..++|+.++..+. +. ...-++..+|+|+++.-... ...-.||.+|.++.+|.++
T Consensus 215 ~~yd~~~~~W~~~~~~p~-~r-----~~~~~~~~~~~l~v~GG~~~~~~~~~~~~~~~~~~v~~yd~~~~~W~~~ 283 (315)
T 4asc_A 215 EVYSITDNKWAPFEAFPQ-ER-----SSLSLVSLVGTLYAIGGFATLETESGELVPTELNDIWRYNEEEKKWEGV 283 (315)
T ss_dssp EEEETTTTEEEEECCCSS-CC-----BSCEEEEETTEEEEEEEEEEEECTTSCEEEEEEEEEEEEETTTTEEEEE
T ss_pred EEEECCCCeEEECCCCCC-cc-----cceeEEEECCEEEEECCccccCcCCccccccccCcEEEecCCCChhhhh
Confidence 899999999998864332 11 23346677999999976531 1135789999999999998
No 13
>2woz_A Kelch repeat and BTB domain-containing protein 10; protein binding, invasion and metastasis, UBL conjugation pathway, UBL protein folding; 2.00A {Rattus norvegicus}
Probab=98.25 E-value=7e-05 Score=69.30 Aligned_cols=195 Identities=13% Similarity=0.113 Sum_probs=116.5
Q ss_pred eeeeecCCCcEEEecCCCcCCCCeEEEcCCceEEEEecCC-CCCCceeeeccCCCceEEEEcCCCCceeeCCCCcccCcc
Q 041774 76 SHLFDTTHKLKYTIKTDPRVLHSKIKASKDGWVLFSKANI-NPSPFLFISYNSSPSSLFFYNPFSASIIELPPLHMFSSD 154 (382)
Q Consensus 76 ~~~~~~~~~~~~~~~l~p~~~~~~~~gs~~GwL~~~~~~~-~~~~~~~~~~~~~~~~~~l~NP~T~~~i~LP~~~~~~~~ 154 (382)
...||+.+++|..+...|...........+|.|++..... .+. .....+..+||.|.++..+++++.....
T Consensus 80 ~~~~d~~~~~W~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~--------~~~~~~~~yd~~~~~W~~~~~~p~~r~~ 151 (318)
T 2woz_A 80 FFQLDNVSSEWVGLPPLPSARCLFGLGEVDDKIYVVAGKDLQTE--------ASLDSVLCYDPVAAKWSEVKNLPIKVYG 151 (318)
T ss_dssp EEEEETTTTEEEECSCBSSCBCSCEEEEETTEEEEEEEEBTTTC--------CEEEEEEEEETTTTEEEEECCCSSCEES
T ss_pred EEEEeCCCCcEEECCCCCccccccceEEECCEEEEEcCccCCCC--------cccceEEEEeCCCCCEeECCCCCCcccc
Confidence 3468888888877632133211122233477777764321 000 0125788999999999888776543332
Q ss_pred eEEEcCCCCCCCeEEEEEEEe-eC-CCeEEEEEEecCCCceEEeecCCcccccceEEEECCEEEEEee------CCeEEE
Q 041774 155 KATFSTAPTSLFCTVFVLSVY-YS-TRRICISTCKPGERTWTRHFFDGFYGDLHGLTYLRGVLYCSFC------NNVLGA 226 (382)
Q Consensus 155 ~v~~s~~p~s~~~~v~~i~~~-~~-~~~~~i~~~r~gd~~W~~~~~~~~~~~~~d~v~~~G~~Y~l~~------~g~l~~ 226 (382)
..+... .+ ++.++... .. .....+..|.+.+++|+.+.....+.....++.++|++|++.. ...+.+
T Consensus 152 ~~~~~~----~~-~iyv~GG~~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~ 226 (318)
T 2woz_A 152 HNVISH----NG-MIYCLGGKTDDKKCTNRVFIYNPKKGDWKDLAPMKTPRSMFGVAIHKGKIVIAGGVTEDGLSASVEA 226 (318)
T ss_dssp CEEEEE----TT-EEEEECCEESSSCBCCCEEEEETTTTEEEEECCCSSCCBSCEEEEETTEEEEEEEEETTEEEEEEEE
T ss_pred cEEEEE----CC-EEEEEcCCCCCCCccceEEEEcCCCCEEEECCCCCCCcccceEEEECCEEEEEcCcCCCCccceEEE
Confidence 211111 12 23333210 11 1123467899999999988421122334456788999999862 236789
Q ss_pred EEcCCCCeEEeccCCCCCCcceeeceeEEEEeCCcEEEEEEeCC----------CceEEEEEEEcCCCCEEEc
Q 041774 227 FRVSTNSWKIYPHNRIRPTSVYLYYGLIESEHEGSLLSVYYDSH----------RLQWLVFRFDLIKENWVEV 289 (382)
Q Consensus 227 ~d~~~~~~~~~~~p~~~~~~~~~~~~~~LVe~~G~LllV~~~~~----------~~~~~V~~ld~~~~~W~~v 289 (382)
||+..++|+.++..|. +. ....++..+|+|+++.-... ...-.||.+|.++.+|.++
T Consensus 227 yd~~~~~W~~~~~~p~-~r-----~~~~~~~~~~~i~v~GG~~~~~~~~~~~~~~~~~~v~~yd~~~~~W~~~ 293 (318)
T 2woz_A 227 FDLKTNKWEVMTEFPQ-ER-----SSISLVSLAGSLYAIGGFAMIQLESKEFAPTEVNDIWKYEDDKKEWAGM 293 (318)
T ss_dssp EETTTCCEEECCCCSS-CC-----BSCEEEEETTEEEEECCBCCBC----CCBCCBCCCEEEEETTTTEEEEE
T ss_pred EECCCCeEEECCCCCC-cc-----cceEEEEECCEEEEECCeeccCCCCceeccceeeeEEEEeCCCCEehhh
Confidence 9999999998864332 11 23346677899998865432 1135788999999999998
No 14
>2e31_A FBS1, F-box only protein 2; ubiquitin, SCF, ubiquitin ligase, FBS1; 2.40A {Mus musculus} PDB: 2e32_A
Probab=98.14 E-value=8.1e-07 Score=81.30 Aligned_cols=39 Identities=18% Similarity=0.376 Sum_probs=36.1
Q ss_pred CCCCCCCHHHHHHHHHHhcCCCCchhhh-hhhccCcchhccccC
Q 041774 17 KSWSNLPPDIVNLIAENLYYYADYADQV-RFRTICKSWQSTCVP 59 (382)
Q Consensus 17 ~~Ws~LP~dlL~~Il~rL~~~~~~~d~~-rfr~VCk~Wrs~~~~ 59 (382)
...+.||+|||.+|+.+| |..|++ |++.|||+||+++..
T Consensus 49 ~~~~~LP~ell~~Il~~L----p~~~L~~r~~~VCk~Wr~l~~~ 88 (297)
T 2e31_A 49 EYLAELPEPLLLRVLAEL----PATELVQACRLVCLRWKELVDG 88 (297)
T ss_dssp CCTTSSCHHHHHHHHHTS----CHHHHHHTGGGTCHHHHHHHTS
T ss_pred cChhhCCHHHHHHHHHcC----CHHHHHHHHHHHhHHHHHHhcC
Confidence 467899999999999999 999999 999999999999763
No 15
>2uvk_A YJHT; unknown function, hypothetical protein, sialic acid metabolism, kelch repeat, beta-propeller; HET: MSE; 1.50A {Escherichia coli}
Probab=97.68 E-value=0.0037 Score=58.42 Aligned_cols=202 Identities=13% Similarity=0.078 Sum_probs=111.9
Q ss_pred ceeeeecCC--CcEEEecCCCcCCC-CeEEEcCCceEEEEecC-C--CCCCceeeeccCCCceEEEEcCCCCceeeCCCC
Q 041774 75 ISHLFDTTH--KLKYTIKTDPRVLH-SKIKASKDGWVLFSKAN-I--NPSPFLFISYNSSPSSLFFYNPFSASIIELPPL 148 (382)
Q Consensus 75 ~~~~~~~~~--~~~~~~~l~p~~~~-~~~~gs~~GwL~~~~~~-~--~~~~~~~~~~~~~~~~~~l~NP~T~~~i~LP~~ 148 (382)
....||+.. .+|..+...|...+ ...+...+|-|++.... . .+.. ...+.+..+||.|.++..++++
T Consensus 32 ~~~~~d~~~~~~~W~~~~~~p~~~R~~~~~~~~~~~lyv~GG~~~~~~~~~-------~~~~~v~~yd~~~~~W~~~~~~ 104 (357)
T 2uvk_A 32 AWYKLDTQAKDKKWTALAAFPGGPRDQATSAFIDGNLYVFGGIGKNSEGLT-------QVFNDVHKYNPKTNSWVKLMSH 104 (357)
T ss_dssp CEEEEETTSSSCCEEECCCCTTCCCBSCEEEEETTEEEEECCEEECTTSCE-------EECCCEEEEETTTTEEEECSCC
T ss_pred eEEEEccccCCCCeeECCCCCCCcCccceEEEECCEEEEEcCCCCCCCccc-------eeeccEEEEeCCCCcEEECCCC
Confidence 345688864 66776632241121 11223346777765332 0 0000 0135789999999999998876
Q ss_pred c-ccCcceEEEcCCCCCCCeEEEEEEEeeCC------------------------------------CeEEEEEEecCCC
Q 041774 149 H-MFSSDKATFSTAPTSLFCTVFVLSVYYST------------------------------------RRICISTCKPGER 191 (382)
Q Consensus 149 ~-~~~~~~v~~s~~p~s~~~~v~~i~~~~~~------------------------------------~~~~i~~~r~gd~ 191 (382)
. .......+... .+ +++++.. ..+ ....+..|.+.++
T Consensus 105 ~p~~r~~~~~~~~----~~-~iyv~GG-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~yd~~~~ 178 (357)
T 2uvk_A 105 APMGMAGHVTFVH----NG-KAYVTGG-VNQNIFNGYFEDLNEAGKDSTAIDKINAHYFDKKAEDYFFNKFLLSFDPSTQ 178 (357)
T ss_dssp CSSCCSSEEEEEE----TT-EEEEEEC-CCHHHHHHHHHHHHHHTTCHHHHHHHHHHHHSSCGGGGCCCCEEEEEETTTT
T ss_pred CCcccccceEEEE----CC-EEEEEeC-cCCCcCcccccchhhcCCcccchhhhhhhhccccccccCCcccEEEEeCCCC
Confidence 5 33332211111 12 2333332 110 0136778999999
Q ss_pred ceEEeecCCccccc-ceEEEECCEEEEEee-------CCeEEEEEc--CCCCeEEeccCCCCCCcceeeceeEEEEeCCc
Q 041774 192 TWTRHFFDGFYGDL-HGLTYLRGVLYCSFC-------NNVLGAFRV--STNSWKIYPHNRIRPTSVYLYYGLIESEHEGS 261 (382)
Q Consensus 192 ~W~~~~~~~~~~~~-~d~v~~~G~~Y~l~~-------~g~l~~~d~--~~~~~~~~~~p~~~~~~~~~~~~~~LVe~~G~ 261 (382)
.|+.+..-..+... ..++..+|++|++.. ...+..||+ ...+|+.+...+. +.. .....++..+|+
T Consensus 179 ~W~~~~~~p~~~~~~~~~~~~~~~iyv~GG~~~~~~~~~~v~~~d~d~~~~~W~~~~~~~~-~~~---~~~~~~~~~~~~ 254 (357)
T 2uvk_A 179 QWSYAGESPWYGTAGAAVVNKGDKTWLINGEAKPGLRTDAVFELDFTGNNLKWNKLAPVSS-PDG---VAGGFAGISNDS 254 (357)
T ss_dssp EEEEEEECSSCCCBSCEEEEETTEEEEECCEEETTEECCCEEEEECC---CEEEECCCSST-TTC---CBSCEEEEETTE
T ss_pred cEEECCCCCCCCcccccEEEECCEEEEEeeecCCCcccCceEEEEecCCCCcEEecCCCCC-Ccc---cccceEEEECCE
Confidence 99987421111223 567788999999852 346888887 6678988753221 110 022346778999
Q ss_pred EEEEEEeCCC------------------ceEEEEEEEcCCCCEEEcccCC
Q 041774 262 LLSVYYDSHR------------------LQWLVFRFDLIKENWVEVNRLD 293 (382)
Q Consensus 262 LllV~~~~~~------------------~~~~V~~ld~~~~~W~~v~~Lg 293 (382)
|+++.-.... ....|+.+|.++.+|.++..+.
T Consensus 255 iyv~GG~~~~~~~~~~~~g~~~~~~~~~~~~~~~~yd~~~~~W~~~~~~p 304 (357)
T 2uvk_A 255 LIFAGGAGFKGSRENYQNGKNYAHEGLKKSYSTDIHLWHNGKWDKSGELS 304 (357)
T ss_dssp EEEECCEECTTHHHHHHTTCSSTTTTCCCEECCEEEECC---CEEEEECS
T ss_pred EEEEcCccccCCcccccccceeccccccceeeEEEEecCCCceeeCCCCC
Confidence 9998754210 1246778888899999997765
No 16
>2ovr_B FBW7, F-BOX/WD repeat protein 7, F-box PROT; WD40 domains, double phosphorylation, transcription-C complex; HET: TPO; 2.50A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1 PDB: 2ovp_B* 2ovq_B*
Probab=97.60 E-value=0.0032 Score=60.47 Aligned_cols=37 Identities=19% Similarity=0.333 Sum_probs=34.7
Q ss_pred CCCCCCHHHHHHHHHHhcCCCCchhhhhhhccCcchhcccc
Q 041774 18 SWSNLPPDIVNLIAENLYYYADYADQVRFRTICKSWQSTCV 58 (382)
Q Consensus 18 ~Ws~LP~dlL~~Il~rL~~~~~~~d~~rfr~VCk~Wrs~~~ 58 (382)
..+.||.|++..|+..| +..|+++++.|||.|+.++.
T Consensus 18 ~~~~lp~e~~~~i~~~l----~~~~l~~~~~v~~~~~~~~~ 54 (445)
T 2ovr_B 18 FISLLPKELALYVLSFL----EPKDLLQAAQTCRYWRILAE 54 (445)
T ss_dssp TTTSSCHHHHHHHHTTS----CHHHHHHHTTSCHHHHHHHT
T ss_pred hhHHCCHHHHHHHHHhC----CHHHHHHHHHHhHHHHhhcC
Confidence 57899999999999999 99999999999999998865
No 17
>2uvk_A YJHT; unknown function, hypothetical protein, sialic acid metabolism, kelch repeat, beta-propeller; HET: MSE; 1.50A {Escherichia coli}
Probab=97.60 E-value=0.0029 Score=59.12 Aligned_cols=165 Identities=12% Similarity=0.089 Sum_probs=97.4
Q ss_pred CCceEEEEecCCCCCCceeeeccCCCceEEEEcCC--CCceeeCCCCc-ccCcc--eEEEcCCCCCCCeEEEEEEEe-e-
Q 041774 104 KDGWVLFSKANINPSPFLFISYNSSPSSLFFYNPF--SASIIELPPLH-MFSSD--KATFSTAPTSLFCTVFVLSVY-Y- 176 (382)
Q Consensus 104 ~~GwL~~~~~~~~~~~~~~~~~~~~~~~~~l~NP~--T~~~i~LP~~~-~~~~~--~v~~s~~p~s~~~~v~~i~~~-~- 176 (382)
.+|.|++.... ....++.+||. +.++..+|+++ ..+.. .+++. +. +.++... .
T Consensus 18 ~~~~iyv~GG~-------------~~~~~~~~d~~~~~~~W~~~~~~p~~~R~~~~~~~~~------~~-lyv~GG~~~~ 77 (357)
T 2uvk_A 18 DNDTVYIGLGS-------------AGTAWYKLDTQAKDKKWTALAAFPGGPRDQATSAFID------GN-LYVFGGIGKN 77 (357)
T ss_dssp ETTEEEEECGG-------------GTTCEEEEETTSSSCCEEECCCCTTCCCBSCEEEEET------TE-EEEECCEEEC
T ss_pred ECCEEEEEeCc-------------CCCeEEEEccccCCCCeeECCCCCCCcCccceEEEEC------CE-EEEEcCCCCC
Confidence 37777776543 13578899997 48899998876 33332 22331 22 2222210 1
Q ss_pred -CC---CeEEEEEEecCCCceEEeecCC-cccccceEEEECCEEEEEee-------------------------------
Q 041774 177 -ST---RRICISTCKPGERTWTRHFFDG-FYGDLHGLTYLRGVLYCSFC------------------------------- 220 (382)
Q Consensus 177 -~~---~~~~i~~~r~gd~~W~~~~~~~-~~~~~~d~v~~~G~~Y~l~~------------------------------- 220 (382)
.+ ....+..|.+..++|+.+.... .+.....++..+|++|++..
T Consensus 78 ~~~~~~~~~~v~~yd~~~~~W~~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 157 (357)
T 2uvk_A 78 SEGLTQVFNDVHKYNPKTNSWVKLMSHAPMGMAGHVTFVHNGKAYVTGGVNQNIFNGYFEDLNEAGKDSTAIDKINAHYF 157 (357)
T ss_dssp TTSCEEECCCEEEEETTTTEEEECSCCCSSCCSSEEEEEETTEEEEEECCCHHHHHHHHHHHHHHTTCHHHHHHHHHHHH
T ss_pred CCccceeeccEEEEeCCCCcEEECCCCCCcccccceEEEECCEEEEEeCcCCCcCcccccchhhcCCcccchhhhhhhhc
Confidence 00 0124678899999999874221 22223345669999999963
Q ss_pred ---------CCeEEEEEcCCCCeEEeccCCCCCCcceeeceeEEEEeCCcEEEEEEeCCC--c--eEEEEEEEcCCCCEE
Q 041774 221 ---------NNVLGAFRVSTNSWKIYPHNRIRPTSVYLYYGLIESEHEGSLLSVYYDSHR--L--QWLVFRFDLIKENWV 287 (382)
Q Consensus 221 ---------~g~l~~~d~~~~~~~~~~~p~~~~~~~~~~~~~~LVe~~G~LllV~~~~~~--~--~~~V~~ld~~~~~W~ 287 (382)
...+.+||+..++|+.+...+.... ...-++..+|+|+++.-.... . .+.+|.+|.++.+|.
T Consensus 158 ~~~~~~~~~~~~v~~yd~~~~~W~~~~~~p~~~~-----~~~~~~~~~~~iyv~GG~~~~~~~~~~v~~~d~d~~~~~W~ 232 (357)
T 2uvk_A 158 DKKAEDYFFNKFLLSFDPSTQQWSYAGESPWYGT-----AGAAVVNKGDKTWLINGEAKPGLRTDAVFELDFTGNNLKWN 232 (357)
T ss_dssp SSCGGGGCCCCEEEEEETTTTEEEEEEECSSCCC-----BSCEEEEETTEEEEECCEEETTEECCCEEEEECC---CEEE
T ss_pred cccccccCCcccEEEEeCCCCcEEECCCCCCCCc-----ccccEEEECCEEEEEeeecCCCcccCceEEEEecCCCCcEE
Confidence 1479999999999998853221111 223466678999888654321 1 344455555889999
Q ss_pred EcccCC
Q 041774 288 EVNRLD 293 (382)
Q Consensus 288 ~v~~Lg 293 (382)
++..+.
T Consensus 233 ~~~~~~ 238 (357)
T 2uvk_A 233 KLAPVS 238 (357)
T ss_dssp ECCCSS
T ss_pred ecCCCC
Confidence 998773
No 18
>3v7d_B Cell division control protein 4; WD 40 domain, phospho-peptide complex, E3 ubiquitin ligase, cell cycle, phospho binding protein, phosphorylation; HET: SEP; 2.31A {Saccharomyces cerevisiae} PDB: 1nex_B* 3mks_B*
Probab=97.56 E-value=0.023 Score=54.55 Aligned_cols=36 Identities=19% Similarity=0.346 Sum_probs=33.5
Q ss_pred CCCCCHHHHHHHHHHhcCCCCchhhhhhhccCcchhcccc
Q 041774 19 WSNLPPDIVNLIAENLYYYADYADQVRFRTICKSWQSTCV 58 (382)
Q Consensus 19 Ws~LP~dlL~~Il~rL~~~~~~~d~~rfr~VCk~Wrs~~~ 58 (382)
.+.||+||+..|+..| +..|++++..|||.|+.++.
T Consensus 15 ~~~lp~~~~~~i~~~l----~~~~l~~~~~v~~~w~~~~~ 50 (464)
T 3v7d_B 15 ITSLPFEISLKIFNYL----QFEDIINSLGVSQNWNKIIR 50 (464)
T ss_dssp HHHSCHHHHHHHHTTS----CHHHHHHHHTTCHHHHHHHT
T ss_pred hHHCCHHHHHHHHhcC----CHHHHHHHHHHHHHHHHHHc
Confidence 5689999999999999 99999999999999998754
No 19
>1p22_A F-BOX/WD-repeat protein 1A; ubiquitination, degradation, signaling protein; HET: SEP; 2.95A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1
Probab=97.30 E-value=0.078 Score=50.54 Aligned_cols=36 Identities=25% Similarity=0.414 Sum_probs=32.9
Q ss_pred CCCCCHH----HHHHHHHHhcCCCCchhhhhhhccCcchhcccc
Q 041774 19 WSNLPPD----IVNLIAENLYYYADYADQVRFRTICKSWQSTCV 58 (382)
Q Consensus 19 Ws~LP~d----lL~~Il~rL~~~~~~~d~~rfr~VCk~Wrs~~~ 58 (382)
.+.||+| |+..|+..| +..|++++..|||.||.++.
T Consensus 11 ~~~lp~e~~~~~~~~i~~~l----~~~~l~~~~~v~~~w~~~~~ 50 (435)
T 1p22_A 11 ITALPARGLDHIAENILSYL----DAKSLCAAELVCKEWYRVTS 50 (435)
T ss_dssp HHHTGGGTCHHHHHHHHTTC----CHHHHHHHHHHCHHHHHHHH
T ss_pred HHHCCcchHHHHHHHHHhcC----CHHHHHHHHHHHHHHHHHhc
Confidence 4579999 999999999 99999999999999998764
No 20
>2zwa_A Leucine carboxyl methyltransferase 2; HET: SAH CIT; 1.70A {Saccharomyces cerevisiae} PDB: 2zw9_A* 2zzk_A*
Probab=97.25 E-value=0.014 Score=60.07 Aligned_cols=195 Identities=10% Similarity=-0.002 Sum_probs=112.6
Q ss_pred eeeecCCCcEEEecCC------CcC-CCCeEEEcC-CceEEEEecCCCCCCceeeeccCCCceEEEEcCCCCceeeCCCC
Q 041774 77 HLFDTTHKLKYTIKTD------PRV-LHSKIKASK-DGWVLFSKANINPSPFLFISYNSSPSSLFFYNPFSASIIELPPL 148 (382)
Q Consensus 77 ~~~~~~~~~~~~~~l~------p~~-~~~~~~gs~-~GwL~~~~~~~~~~~~~~~~~~~~~~~~~l~NP~T~~~i~LP~~ 148 (382)
..||+.+++|..+... |.- ..+..+.-. +|-|++..+...+. ...+.+.++||.|.++..++++
T Consensus 415 ~~yd~~~~~W~~~~~~~p~~~~p~~R~~hs~~~~~~~~~lyv~GG~~~~~--------~~~~dv~~yd~~t~~W~~~~~~ 486 (695)
T 2zwa_A 415 LQLSIHYDKIDMKNIEVSSSEVPVARMCHTFTTISRNNQLLLIGGRKAPH--------QGLSDNWIFDMKTREWSMIKSL 486 (695)
T ss_dssp EEEEECSSCEEEEECCCCCSCCCCCCBSCEEEEETTTTEEEEECCBSSTT--------CBCCCCEEEETTTTEEEECCCC
T ss_pred EEEECCCCeEEEeccCCCCCCCCccccceEEEEEccCCEEEEEcCCCCCC--------CccccEEEEeCCCCcEEECCCC
Confidence 4678888888776520 221 123333322 77777775431110 0135789999999999999887
Q ss_pred cccCcceEEEcCCCCCCCeEEEEEEEeeCCCeEEEEEEecCCCceEEeecCC-cc--cccceEEEEC---CEEEEEeeC-
Q 041774 149 HMFSSDKATFSTAPTSLFCTVFVLSVYYSTRRICISTCKPGERTWTRHFFDG-FY--GDLHGLTYLR---GVLYCSFCN- 221 (382)
Q Consensus 149 ~~~~~~~v~~s~~p~s~~~~v~~i~~~~~~~~~~i~~~r~gd~~W~~~~~~~-~~--~~~~d~v~~~---G~~Y~l~~~- 221 (382)
+...+...+.... .+. ++++.. .++.. .+..|.+..+.|+.+.... ++ ......+.++ |++|++...
T Consensus 487 p~~R~~h~~~~~~---~~~-iyv~GG-~~~~~-~v~~yd~~t~~W~~~~~~g~~p~~r~~~~a~v~~~~~~~iyv~GG~~ 560 (695)
T 2zwa_A 487 SHTRFRHSACSLP---DGN-VLILGG-VTEGP-AMLLYNVTEEIFKDVTPKDEFFQNSLVSAGLEFDPVSKQGIILGGGF 560 (695)
T ss_dssp SBCCBSCEEEECT---TSC-EEEECC-BCSSC-SEEEEETTTTEEEECCCSSGGGGSCCBSCEEEEETTTTEEEEECCBC
T ss_pred CCCcccceEEEEc---CCE-EEEECC-CCCCC-CEEEEECCCCceEEccCCCCCCCcccceeEEEEeCCCCEEEEECCcC
Confidence 6544332221100 122 333332 12222 5778999999999985311 22 2223334445 899998632
Q ss_pred -------CeEEEEEcCCCC------eEEeccCCCCCCcceeeceeEEEEeC-CcEEEEEEeCCC----ceEEEEEEEcCC
Q 041774 222 -------NVLGAFRVSTNS------WKIYPHNRIRPTSVYLYYGLIESEHE-GSLLSVYYDSHR----LQWLVFRFDLIK 283 (382)
Q Consensus 222 -------g~l~~~d~~~~~------~~~~~~p~~~~~~~~~~~~~~LVe~~-G~LllV~~~~~~----~~~~V~~ld~~~ 283 (382)
..+.+||+...+ |+.+...+..+. .....+..+ |+|+++...... ..-.|+.+|.++
T Consensus 561 ~~~~~~~~~v~~yd~~~~~w~~~~~W~~~~~~p~~~R-----~~~~~~~~~~~~iyv~GG~~~~~~~~~~~~v~~yd~~t 635 (695)
T 2zwa_A 561 MDQTTVSDKAIIFKYDAENATEPITVIKKLQHPLFQR-----YGSQIKYITPRKLLIVGGTSPSGLFDRTNSIISLDPLS 635 (695)
T ss_dssp TTSSCBCCEEEEEEECTTCSSCCEEEEEEEECGGGCC-----BSCEEEEEETTEEEEECCBCSSCCCCTTTSEEEEETTT
T ss_pred CCCCeeeCcEEEEEccCCccccceEEEEcCCCCCCCc-----ccceEEEeCCCEEEEECCccCCCCCCCCCeEEEEECCC
Confidence 468999999888 777654111111 122345556 899888765321 134577888889
Q ss_pred CCEEEcc
Q 041774 284 ENWVEVN 290 (382)
Q Consensus 284 ~~W~~v~ 290 (382)
.+|..+.
T Consensus 636 ~~W~~~~ 642 (695)
T 2zwa_A 636 ETLTSIP 642 (695)
T ss_dssp TEEEECC
T ss_pred CeEEEee
Confidence 9999653
No 21
>2ast_B S-phase kinase-associated protein 2; SCF-substrate complex, LRR, cell cycle, protein turnover COM ligase-ligase inhibitor complex; HET: TPO; 2.30A {Homo sapiens} SCOP: a.158.1.1 c.10.1.3 PDB: 2ass_B 1fqv_A* 1fs2_A
Probab=97.25 E-value=9.1e-05 Score=68.90 Aligned_cols=39 Identities=23% Similarity=0.509 Sum_probs=36.1
Q ss_pred CCCCCCCCHHHHHHHHHHhcCCCCchhhhhhhccCcchhcccc
Q 041774 16 TKSWSNLPPDIVNLIAENLYYYADYADQVRFRTICKSWQSTCV 58 (382)
Q Consensus 16 ~~~Ws~LP~dlL~~Il~rL~~~~~~~d~~rfr~VCk~Wrs~~~ 58 (382)
.+.|++||+|++..|+.+| +..|+++++.|||+|+.++.
T Consensus 6 ~~~~~~LP~eil~~If~~L----~~~d~~~~~~vc~~W~~~~~ 44 (336)
T 2ast_B 6 GVSWDSLPDELLLGIFSCL----CLPELLKVSGVCKRWYRLAS 44 (336)
T ss_dssp -CCSSSSCHHHHHHHHTTS----CHHHHHHTTSSCHHHHHHHT
T ss_pred cCChhhCCHHHHHHHHHhC----CHHHHHHHHHHHHHHHHHhc
Confidence 4689999999999999999 99999999999999999864
No 22
>3l2o_B F-box only protein 4; small G protein fold, UBL conjugation pathway, ubiquitin Pro ligase, protein binding-cell cycle complex; 2.80A {Homo sapiens}
Probab=96.93 E-value=0.00013 Score=66.18 Aligned_cols=39 Identities=21% Similarity=0.291 Sum_probs=35.8
Q ss_pred CCCCCCCHHHHHHHHHHhcCCCCchhhhhhhccCcchhccccC
Q 041774 17 KSWSNLPPDIVNLIAENLYYYADYADQVRFRTICKSWQSTCVP 59 (382)
Q Consensus 17 ~~Ws~LP~dlL~~Il~rL~~~~~~~d~~rfr~VCk~Wrs~~~~ 59 (382)
..+.+||.|++..|++.| +..|+.++..|||.||.++..
T Consensus 3 ~~l~~LP~ei~l~IlsfL----~p~DL~~l~~vcr~Wr~la~D 41 (312)
T 3l2o_B 3 STLTRLPIDVQLYILSFL----SPHDLCQLGSTNHYWNETVRD 41 (312)
T ss_dssp CHHHHSCHHHHHHHHHTS----CHHHHHHHHTTCHHHHHHHTC
T ss_pred chhHhCCHHHHHHHHhcC----CHHHHHHHHHHHHHHHHHhcc
Confidence 356789999999999999 999999999999999999763
No 23
>2p1m_B Transport inhibitor response 1 protein; F-BOX, leucine rich repeat, signaling protein; HET: IHP; 1.80A {Arabidopsis thaliana} PDB: 2p1n_B* 2p1o_B* 2p1p_B* 2p1q_B* 3c6n_B* 3c6o_B* 3c6p_B*
Probab=96.51 E-value=0.00073 Score=67.80 Aligned_cols=36 Identities=17% Similarity=0.415 Sum_probs=29.0
Q ss_pred CCCCCCCHHHHHHHHHHhcCCCC-chhhhhhhccCcchhcc
Q 041774 17 KSWSNLPPDIVNLIAENLYYYAD-YADQVRFRTICKSWQST 56 (382)
Q Consensus 17 ~~Ws~LP~dlL~~Il~rL~~~~~-~~d~~rfr~VCk~Wrs~ 56 (382)
..|++||+|+|..|+.+| + ..|+.+++.|||+|+.+
T Consensus 4 d~~~~LPdevL~~If~~L----~~~~d~~~~s~vck~W~~~ 40 (594)
T 2p1m_B 4 RIALSFPEEVLEHVFSFI----QLDKDRNSVSLVCKSWYEI 40 (594)
T ss_dssp ------CHHHHHHHHHTC----CCHHHHHHHHTSCHHHHHH
T ss_pred cchhhCCHHHHHHHHhhc----CCchhHHHHHHHHHHHHHh
Confidence 479999999999999999 7 99999999999999977
No 24
>3ogk_B Coronatine-insensitive protein 1; leucine rich repeat, ubiquitin ligase, SCF, protein binding; HET: OGK; 2.80A {Arabidopsis thaliana} PDB: 3ogl_B* 3ogm_B*
Probab=95.52 E-value=0.003 Score=63.25 Aligned_cols=35 Identities=14% Similarity=0.355 Sum_probs=32.6
Q ss_pred CCCCCHHHHHHHHHHhcCCCCchhhhhhhccCcchhcc
Q 041774 19 WSNLPPDIVNLIAENLYYYADYADQVRFRTICKSWQST 56 (382)
Q Consensus 19 Ws~LP~dlL~~Il~rL~~~~~~~d~~rfr~VCk~Wrs~ 56 (382)
.++||+|++..|+.+| ++..|+.+++.|||+|+.+
T Consensus 13 ~~~LPdeil~~I~~~L---~~~~d~~~~s~vck~W~~~ 47 (592)
T 3ogk_B 13 CVATVDDVIEQVMTYI---TDPKDRDSASLVCRRWFKI 47 (592)
T ss_dssp CCCCGGGTHHHHHTTC---CCHHHHHHHTTSCHHHHHH
T ss_pred cCCCCHHHHHHHHHhc---CCHHHHHHHHHHhHHHHHh
Confidence 3689999999999999 7799999999999999887
No 25
>2zwa_A Leucine carboxyl methyltransferase 2; HET: SAH CIT; 1.70A {Saccharomyces cerevisiae} PDB: 2zw9_A* 2zzk_A*
Probab=94.13 E-value=0.28 Score=50.28 Aligned_cols=102 Identities=11% Similarity=0.048 Sum_probs=71.7
Q ss_pred EEEEEecCCCceEEeecC----Ccc--cccceEEEE--CCEEEEEee-------CCeEEEEEcCCCCeEEeccCCCCCCc
Q 041774 182 CISTCKPGERTWTRHFFD----GFY--GDLHGLTYL--RGVLYCSFC-------NNVLGAFRVSTNSWKIYPHNRIRPTS 246 (382)
Q Consensus 182 ~i~~~r~gd~~W~~~~~~----~~~--~~~~d~v~~--~G~~Y~l~~-------~g~l~~~d~~~~~~~~~~~p~~~~~~ 246 (382)
.+..|.+.++.|+.+..+ .++ .....++.. +|++|++.. ...+..||+...+|+.++..+. +.
T Consensus 413 ~v~~yd~~~~~W~~~~~~~p~~~~p~~R~~hs~~~~~~~~~lyv~GG~~~~~~~~~dv~~yd~~t~~W~~~~~~p~-~R- 490 (695)
T 2zwa_A 413 EILQLSIHYDKIDMKNIEVSSSEVPVARMCHTFTTISRNNQLLLIGGRKAPHQGLSDNWIFDMKTREWSMIKSLSH-TR- 490 (695)
T ss_dssp CEEEEEECSSCEEEEECCCCCSCCCCCCBSCEEEEETTTTEEEEECCBSSTTCBCCCCEEEETTTTEEEECCCCSB-CC-
T ss_pred cEEEEECCCCeEEEeccCCCCCCCCccccceEEEEEccCCEEEEEcCCCCCCCccccEEEEeCCCCcEEECCCCCC-Cc-
Confidence 466788899999998622 122 334556777 999999962 2358999999999998853321 11
Q ss_pred ceeeceeEEEE-eCCcEEEEEEeCCCceEEEEEEEcCCCCEEEccc
Q 041774 247 VYLYYGLIESE-HEGSLLSVYYDSHRLQWLVFRFDLIKENWVEVNR 291 (382)
Q Consensus 247 ~~~~~~~~LVe-~~G~LllV~~~~~~~~~~V~~ld~~~~~W~~v~~ 291 (382)
...-.+. .+|.|+++...... . .|+.+|..+.+|.++..
T Consensus 491 ----~~h~~~~~~~~~iyv~GG~~~~-~-~v~~yd~~t~~W~~~~~ 530 (695)
T 2zwa_A 491 ----FRHSACSLPDGNVLILGGVTEG-P-AMLLYNVTEEIFKDVTP 530 (695)
T ss_dssp ----BSCEEEECTTSCEEEECCBCSS-C-SEEEEETTTTEEEECCC
T ss_pred ----ccceEEEEcCCEEEEECCCCCC-C-CEEEEECCCCceEEccC
Confidence 2223444 48999998766544 3 88999999999999875
No 26
>1k3i_A Galactose oxidase precursor; blade beta propeller, prosequence form, precursor of copper enzyme., oxidoreductase; 1.40A {Fusarium SP} SCOP: b.1.18.2 b.18.1.1 b.69.1.1 PDB: 1gof_A 1gog_A 1goh_A 2eie_A 2jkx_A 2vz1_A 2vz3_A 2eic_A 2eib_A 1t2x_A 2eid_A 2wq8_A
Probab=93.81 E-value=0.38 Score=48.78 Aligned_cols=103 Identities=10% Similarity=0.075 Sum_probs=66.3
Q ss_pred EEEEEEecCCCceEEeec-CCccccc-ceEE-EECCEEEEEee--CCeEEEEEcCCCCeEEeccCCCCCCcceeeceeEE
Q 041774 181 ICISTCKPGERTWTRHFF-DGFYGDL-HGLT-YLRGVLYCSFC--NNVLGAFRVSTNSWKIYPHNRIRPTSVYLYYGLIE 255 (382)
Q Consensus 181 ~~i~~~r~gd~~W~~~~~-~~~~~~~-~d~v-~~~G~~Y~l~~--~g~l~~~d~~~~~~~~~~~p~~~~~~~~~~~~~~L 255 (382)
..+..|.+..++|+.+.. +...... ..++ ..+|++|++.. ...+..||+..++|..++..+. +. ...-.
T Consensus 219 ~~~~~yd~~t~~w~~~~~~~~~~~~~~~~~~~~~~g~lyv~GG~~~~~v~~yd~~t~~W~~~~~~~~-~R-----~~~s~ 292 (656)
T 1k3i_A 219 TLTSSWDPSTGIVSDRTVTVTKHDMFCPGISMDGNGQIVVTGGNDAKKTSLYDSSSDSWIPGPDMQV-AR-----GYQSS 292 (656)
T ss_dssp EEEEEECTTTCCBCCCEEEECSCCCSSCEEEECTTSCEEEECSSSTTCEEEEEGGGTEEEECCCCSS-CC-----SSCEE
T ss_pred EEEEEEeCCCCcEEeCcccCCCCCCccccccCCCCCCEEEeCCCCCCceEEecCcCCceeECCCCCc-cc-----cccce
Confidence 357789999999998632 1111112 2233 46899999973 3479999999999998753221 11 12234
Q ss_pred EEe-CCcEEEEEEeCC--CceEEEEEEEcCCCCEEEc
Q 041774 256 SEH-EGSLLSVYYDSH--RLQWLVFRFDLIKENWVEV 289 (382)
Q Consensus 256 Ve~-~G~LllV~~~~~--~~~~~V~~ld~~~~~W~~v 289 (382)
+.. +|+|+++.-... ...-.++.+|.++.+|.++
T Consensus 293 ~~~~dg~iyv~GG~~~~~~~~~~~e~yd~~t~~W~~~ 329 (656)
T 1k3i_A 293 ATMSDGRVFTIGGSWSGGVFEKNGEVYSPSSKTWTSL 329 (656)
T ss_dssp EECTTSCEEEECCCCCSSSCCCCEEEEETTTTEEEEE
T ss_pred EEecCCeEEEEeCcccCCcccccceEeCCCCCcceeC
Confidence 555 899999876322 1123466678888999997
No 27
>1k3i_A Galactose oxidase precursor; blade beta propeller, prosequence form, precursor of copper enzyme., oxidoreductase; 1.40A {Fusarium SP} SCOP: b.1.18.2 b.18.1.1 b.69.1.1 PDB: 1gof_A 1gog_A 1goh_A 2eie_A 2jkx_A 2vz1_A 2vz3_A 2eic_A 2eib_A 1t2x_A 2eid_A 2wq8_A
Probab=93.54 E-value=0.61 Score=47.28 Aligned_cols=148 Identities=10% Similarity=0.038 Sum_probs=83.6
Q ss_pred eeeecCCCcEEEe-cCCCcCCCCeEEEcCCceEEEEecCCCCCCceeeeccCCCceEEEEcCCCCceeeCCCCcccC--c
Q 041774 77 HLFDTTHKLKYTI-KTDPRVLHSKIKASKDGWVLFSKANINPSPFLFISYNSSPSSLFFYNPFSASIIELPPLHMFS--S 153 (382)
Q Consensus 77 ~~~~~~~~~~~~~-~l~p~~~~~~~~gs~~GwL~~~~~~~~~~~~~~~~~~~~~~~~~l~NP~T~~~i~LP~~~~~~--~ 153 (382)
..||+..++|..+ ++ |....+..+...+|-|++........ +-..+.....+.++||.|+++..++.++... +
T Consensus 169 ~~~dp~~~~W~~~~~~-P~~~~~~av~~~~g~l~v~GG~~~~~---~~~~~~~~~~~~~yd~~t~~w~~~~~~~~~~~~~ 244 (656)
T 1k3i_A 169 TAPQPGLGRWGPTIDL-PIVPAAAAIEPTSGRVLMWSSYRNDA---FGGSPGGITLTSSWDPSTGIVSDRTVTVTKHDMF 244 (656)
T ss_dssp CCCCTTSCEEEEEEEC-SSCCSEEEEETTTTEEEEEEECCCTT---TCSCCCSEEEEEEECTTTCCBCCCEEEECSCCCS
T ss_pred ccCCCCCCeeeeeccC-CCCceeEEEEecCCEEEEEecccccc---cccCCCCeEEEEEEeCCCCcEEeCcccCCCCCCc
Confidence 4577878888754 34 55322222222267777664321000 0000001236789999999998887654321 1
Q ss_pred c-eEEEcCCCCCCCeEEEEEEEeeCCCeEEEEEEecCCCceEEeecCCcc--cccceEEEE-CCEEEEEeeC-------C
Q 041774 154 D-KATFSTAPTSLFCTVFVLSVYYSTRRICISTCKPGERTWTRHFFDGFY--GDLHGLTYL-RGVLYCSFCN-------N 222 (382)
Q Consensus 154 ~-~v~~s~~p~s~~~~v~~i~~~~~~~~~~i~~~r~gd~~W~~~~~~~~~--~~~~d~v~~-~G~~Y~l~~~-------g 222 (382)
. .+++.. .+ +++++.. .... .+..|.+..+.|+.+. .++ .....++.. +|++|++... .
T Consensus 245 ~~~~~~~~----~g-~lyv~GG-~~~~--~v~~yd~~t~~W~~~~--~~~~~R~~~s~~~~~dg~iyv~GG~~~~~~~~~ 314 (656)
T 1k3i_A 245 CPGISMDG----NG-QIVVTGG-NDAK--KTSLYDSSSDSWIPGP--DMQVARGYQSSATMSDGRVFTIGGSWSGGVFEK 314 (656)
T ss_dssp SCEEEECT----TS-CEEEECS-SSTT--CEEEEEGGGTEEEECC--CCSSCCSSCEEEECTTSCEEEECCCCCSSSCCC
T ss_pred cccccCCC----CC-CEEEeCC-CCCC--ceEEecCcCCceeECC--CCCccccccceEEecCCeEEEEeCcccCCcccc
Confidence 1 233322 12 2333332 1222 4678889999999873 332 334455666 9999999641 3
Q ss_pred eEEEEEcCCCCeEEec
Q 041774 223 VLGAFRVSTNSWKIYP 238 (382)
Q Consensus 223 ~l~~~d~~~~~~~~~~ 238 (382)
.+..||+..++|+.++
T Consensus 315 ~~e~yd~~t~~W~~~~ 330 (656)
T 1k3i_A 315 NGEVYSPSSKTWTSLP 330 (656)
T ss_dssp CEEEEETTTTEEEEET
T ss_pred cceEeCCCCCcceeCC
Confidence 5899999999999873
No 28
>3hfq_A Uncharacterized protein LP_2219; Q88V64_lacpl, NESG, LPR118, structural genomics, PSI-2, protein structure initiative; 1.96A {Lactobacillus plantarum}
Probab=62.34 E-value=82 Score=27.72 Aligned_cols=80 Identities=14% Similarity=0.145 Sum_probs=45.5
Q ss_pred ceEEEE-CCE-EEEEee-CCeEEEEEcCCC-CeEEeccCCCCCCcceeeceeEEEEeCCcEEEEEEeCCCceEEEEEEEc
Q 041774 206 HGLTYL-RGV-LYCSFC-NNVLGAFRVSTN-SWKIYPHNRIRPTSVYLYYGLIESEHEGSLLSVYYDSHRLQWLVFRFDL 281 (382)
Q Consensus 206 ~d~v~~-~G~-~Y~l~~-~g~l~~~d~~~~-~~~~~~~p~~~~~~~~~~~~~~LVe~~G~LllV~~~~~~~~~~V~~ld~ 281 (382)
..+++. +|+ +|+.+. .+.|.+||+... +++.+...+..... -...-+..+|+.++|....+. .+.||++|.
T Consensus 243 ~~i~~spdG~~l~v~~~~~~~v~v~~~~~~g~~~~~~~~~~~~~~----~~~~~~spdg~~l~v~~~~~~-~v~v~~~d~ 317 (347)
T 3hfq_A 243 AAIRLSHDGHFLYVSNRGYNTLAVFAVTADGHLTLIQQISTEGDF----PRDFDLDPTEAFVVVVNQNTD-NATLYARDL 317 (347)
T ss_dssp EEEEECTTSCEEEEEEETTTEEEEEEECGGGCEEEEEEEECSSSC----CCEEEECTTSSEEEEEETTTT-EEEEEEECT
T ss_pred eeEEECCCCCEEEEEeCCCCEEEEEEECCCCcEEEeEEEecCCCC----cCeEEECCCCCEEEEEEcCCC-cEEEEEEeC
Confidence 345553 676 666654 678999998632 44443321111100 112223457876666554434 799999998
Q ss_pred CCCCEEEcc
Q 041774 282 IKENWVEVN 290 (382)
Q Consensus 282 ~~~~W~~v~ 290 (382)
++++..++.
T Consensus 318 ~tg~l~~~~ 326 (347)
T 3hfq_A 318 TSGKLSLLQ 326 (347)
T ss_dssp TTCCEEEEE
T ss_pred CCCeEEecc
Confidence 877766554
No 29
>3hfq_A Uncharacterized protein LP_2219; Q88V64_lacpl, NESG, LPR118, structural genomics, PSI-2, protein structure initiative; 1.96A {Lactobacillus plantarum}
Probab=61.54 E-value=85 Score=27.62 Aligned_cols=31 Identities=13% Similarity=0.145 Sum_probs=22.4
Q ss_pred eEEEE-CCEEEEEee---CCeEEEEEcCCCCeEEe
Q 041774 207 GLTYL-RGVLYCSFC---NNVLGAFRVSTNSWKIY 237 (382)
Q Consensus 207 d~v~~-~G~~Y~l~~---~g~l~~~d~~~~~~~~~ 237 (382)
.+++. +|++|+.+. .+.|.+||+...+.+.+
T Consensus 44 ~~a~spdg~l~~~~~~~~~~~v~~~~~~~g~~~~~ 78 (347)
T 3hfq_A 44 YLALSAKDCLYSVDKEDDEGGIAAWQIDGQTAHKL 78 (347)
T ss_dssp CEEECTTCEEEEEEEETTEEEEEEEEEETTEEEEE
T ss_pred eEEEccCCeEEEEEecCCCceEEEEEecCCcEEEe
Confidence 45553 789998876 47899999976655544
No 30
>3sre_A PON1, serum paraoxonase; directed evolution, 6-blades-propeller fold, hydrolase; HET: LMT; 1.99A {Artificial gene} PDB: 1v04_A* 3srg_A*
Probab=60.63 E-value=64 Score=29.70 Aligned_cols=74 Identities=11% Similarity=0.039 Sum_probs=37.3
Q ss_pred eCCeEEEEEcCCC--CeEEeccCCCCCC-cceeeceeEEEE-eCC--cEEEEEEeCCCceEEEEEEEcCCCCEEEcccCC
Q 041774 220 CNNVLGAFRVSTN--SWKIYPHNRIRPT-SVYLYYGLIESE-HEG--SLLSVYYDSHRLQWLVFRFDLIKENWVEVNRLD 293 (382)
Q Consensus 220 ~~g~l~~~d~~~~--~~~~~~~p~~~~~-~~~~~~~~~LVe-~~G--~LllV~~~~~~~~~~V~~ld~~~~~W~~v~~Lg 293 (382)
..|.|+.+|+... +.+.+......++ .........+.. .+| .|++|+.......++||++|.+....+-+.++.
T Consensus 81 ~~G~I~~~d~~~~~~~~~~l~~~g~~~~~~~f~PhGi~~~~d~dg~~~L~Vvnh~~~~s~ielf~~d~~~~~~~~~~~~~ 160 (355)
T 3sre_A 81 KSGKILLMDLNEKEPAVSELEIIGNTLDISSFNPHGISTFIDDDNTVYLLVVNHPGSSSTVEVFKFQEEEKSLLHLKTIR 160 (355)
T ss_dssp -CCEEEEEETTSSSCCEEECEEECSSCCGGGCCEEEEEEEECTTCCEEEEEEECSTTCCEEEEEEEETTTTEEEEEEEEC
T ss_pred CCCeEEEEecCCCCCceEEEEccCCCCCcCceeeeeeEEEECCCCcEEEEEEECCCCCCeEEEEEEECCCCEEEEEeccc
Confidence 4677888887632 3333322110000 011112333333 245 477776654334899999998766555555443
No 31
>3q7m_A Lipoprotein YFGL, BAMB; beta-propeller, BAM complex, outer membrane protein folding, negative, BAMA, protein binding; 1.65A {Escherichia coli} PDB: 3q7n_A 3q7o_A 3p1l_A 3prw_A 2yh3_A 3q54_A
Probab=55.96 E-value=1.1e+02 Score=27.31 Aligned_cols=44 Identities=18% Similarity=0.126 Sum_probs=31.1
Q ss_pred cCCCceEEeecCCcccccceEEEECCEEEEEeeCCeEEEEEcCCCC
Q 041774 188 PGERTWTRHFFDGFYGDLHGLTYLRGVLYCSFCNNVLGAFRVSTNS 233 (382)
Q Consensus 188 ~gd~~W~~~~~~~~~~~~~d~v~~~G~~Y~l~~~g~l~~~d~~~~~ 233 (382)
.|...|+.-.... .....++..+|.+|+.+..|.|+++|+...+
T Consensus 296 tG~~~w~~~~~~~--~~~~~~~~~~~~l~v~~~~g~l~~~d~~tG~ 339 (376)
T 3q7m_A 296 GGVTLWTQSDLLH--RLLTSPVLYNGNLVVGDSEGYLHWINVEDGR 339 (376)
T ss_dssp TCCEEEEECTTTT--SCCCCCEEETTEEEEECTTSEEEEEETTTCC
T ss_pred CCcEEEeecccCC--CcccCCEEECCEEEEEeCCCeEEEEECCCCc
Confidence 4556787631111 2345567789999999999999999987654
No 32
>3scy_A Hypothetical bacterial 6-phosphogluconolactonase; 7-bladed beta-propeller, structural genomics, joint center F structural genomics, JCSG; HET: MSE; 1.50A {Bacteroides fragilis} PDB: 3fgb_A
Probab=54.28 E-value=1.2e+02 Score=26.92 Aligned_cols=78 Identities=14% Similarity=0.074 Sum_probs=44.1
Q ss_pred ceEEEE-CCE-EEEEeeC--CeEEEEEcC--CCCeEEeccCCCCCCcceeeceeEEEEeCCcEEEEEEeCCCceEEEEEE
Q 041774 206 HGLTYL-RGV-LYCSFCN--NVLGAFRVS--TNSWKIYPHNRIRPTSVYLYYGLIESEHEGSLLSVYYDSHRLQWLVFRF 279 (382)
Q Consensus 206 ~d~v~~-~G~-~Y~l~~~--g~l~~~d~~--~~~~~~~~~p~~~~~~~~~~~~~~LVe~~G~LllV~~~~~~~~~~V~~l 279 (382)
.++++. +|+ +|+.... +.|.+|+++ ...++.+..-+. .. .-...-+..+|+.++|....+. .+.||++
T Consensus 262 ~~i~~spdg~~l~v~~~~~~~~i~v~~~~~~~g~~~~~~~~~~-g~----~~~~~~~spdg~~l~~~~~~~~-~v~v~~~ 335 (361)
T 3scy_A 262 GDIHLSPDGKYLYASNRLKADGVAIFKVDETNGTLTKVGYQLT-GI----HPRNFIITPNGKYLLVACRDTN-VIQIFER 335 (361)
T ss_dssp EEEEECTTSSEEEEEECSSSCEEEEEEECTTTCCEEEEEEEEC-SS----CCCEEEECTTSCEEEEEETTTT-EEEEEEE
T ss_pred ccEEECCCCCEEEEECCCCCCEEEEEEEcCCCCcEEEeeEecC-CC----CCceEEECCCCCEEEEEECCCC-CEEEEEE
Confidence 355553 776 5665554 678998886 344544432111 11 0112233457876666554434 7999999
Q ss_pred EcCCCCEEEc
Q 041774 280 DLIKENWVEV 289 (382)
Q Consensus 280 d~~~~~W~~v 289 (382)
|.++++-.++
T Consensus 336 d~~~g~~~~~ 345 (361)
T 3scy_A 336 DQATGLLTDI 345 (361)
T ss_dssp CTTTCCEEEC
T ss_pred ECCCCcEeec
Confidence 9877665544
No 33
>2p4o_A Hypothetical protein; putative lactonase, structural genomics, joint center for ST genomics, JCSG, protein structure initiative, PSI-2; HET: MSE; 1.90A {Nostoc punctiforme} SCOP: b.68.6.3
Probab=52.24 E-value=60 Score=28.51 Aligned_cols=27 Identities=11% Similarity=0.124 Sum_probs=19.9
Q ss_pred ceEEE-ECCEEEEEe-eCCeEEEEEcCCC
Q 041774 206 HGLTY-LRGVLYCSF-CNNVLGAFRVSTN 232 (382)
Q Consensus 206 ~d~v~-~~G~~Y~l~-~~g~l~~~d~~~~ 232 (382)
+.+++ .+|++|+.+ ..+.|..+|+.+.
T Consensus 35 egia~~~~g~lyv~d~~~~~I~~~d~~g~ 63 (306)
T 2p4o_A 35 ENLASAPDGTIFVTNHEVGEIVSITPDGN 63 (306)
T ss_dssp EEEEECTTSCEEEEETTTTEEEEECTTCC
T ss_pred ceEEECCCCCEEEEeCCCCeEEEECCCCc
Confidence 34454 378899988 5678999998764
No 34
>1ri6_A Putative isomerase YBHE; 7-bladed propeller, enzyme, PSI, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.00A {Escherichia coli} SCOP: b.69.11.1
Probab=44.66 E-value=1.5e+02 Score=25.45 Aligned_cols=80 Identities=15% Similarity=0.106 Sum_probs=45.8
Q ss_pred eEEEE-CC-EEEEEe-eCCeEEEEEcC--CCCeEEeccCCCCCCcceeeceeEEEEeCCcEEEEEEeCCCceEEEEEEEc
Q 041774 207 GLTYL-RG-VLYCSF-CNNVLGAFRVS--TNSWKIYPHNRIRPTSVYLYYGLIESEHEGSLLSVYYDSHRLQWLVFRFDL 281 (382)
Q Consensus 207 d~v~~-~G-~~Y~l~-~~g~l~~~d~~--~~~~~~~~~p~~~~~~~~~~~~~~LVe~~G~LllV~~~~~~~~~~V~~ld~ 281 (382)
.+.+. +| .+|+.. ..+.|.+||+. ..+.+.+..-+.... ....-+..+|+.+++...... .+.||++|.
T Consensus 235 ~i~~s~dg~~l~v~~~~~~~i~v~d~~~~~~~~~~~~~~~~~~~-----~~~~~~s~dg~~l~~~~~~~~-~v~v~~~d~ 308 (343)
T 1ri6_A 235 DIHITPDGRHLYACDRTASLITVFSVSEDGSVLSKEGFQPTETQ-----PRGFNVDHSGKYLIAAGQKSH-HISVYEIVG 308 (343)
T ss_dssp EEEECTTSSEEEEEETTTTEEEEEEECTTSCCEEEEEEEECSSS-----CCCEEECTTSSEEEEECTTTC-EEEEEEEET
T ss_pred ceEECCCCCEEEEEecCCCEEEEEEEcCCCCceEEeeeecCCCc-----cceEEECCCCCEEEEecCCCC-eEEEEEEcC
Confidence 45554 46 566555 46889999997 334544422111100 111223346776665443333 799999999
Q ss_pred CCCCEEEcccC
Q 041774 282 IKENWVEVNRL 292 (382)
Q Consensus 282 ~~~~W~~v~~L 292 (382)
++++++++..+
T Consensus 309 ~~g~~~~~~~~ 319 (343)
T 1ri6_A 309 EQGLLHEKGRY 319 (343)
T ss_dssp TTTEEEEEEEE
T ss_pred CCceeeEcccc
Confidence 88888877654
No 35
>3scy_A Hypothetical bacterial 6-phosphogluconolactonase; 7-bladed beta-propeller, structural genomics, joint center F structural genomics, JCSG; HET: MSE; 1.50A {Bacteroides fragilis} PDB: 3fgb_A
Probab=44.26 E-value=72 Score=28.35 Aligned_cols=85 Identities=15% Similarity=0.099 Sum_probs=47.2
Q ss_pred ceEEEE-CCE-EEEEe-eCCeEEEEEcCCCCeEEeccCCCCCCcceeeceeEEEEeCCcEEEEEEeC-CCceEEEEEEEc
Q 041774 206 HGLTYL-RGV-LYCSF-CNNVLGAFRVSTNSWKIYPHNRIRPTSVYLYYGLIESEHEGSLLSVYYDS-HRLQWLVFRFDL 281 (382)
Q Consensus 206 ~d~v~~-~G~-~Y~l~-~~g~l~~~d~~~~~~~~~~~p~~~~~~~~~~~~~~LVe~~G~LllV~~~~-~~~~~~V~~ld~ 281 (382)
..+++. +|+ +|+.+ ..+.|.+||+....+..+......+... .......+..+|+.+.|.... .. .+.||.++.
T Consensus 214 ~~~~~spdg~~l~v~~~~~~~v~v~~~~~g~~~~~~~~~~~~~~~-~~~~~i~~spdg~~l~v~~~~~~~-~i~v~~~~~ 291 (361)
T 3scy_A 214 RHLIFNSDGKFAYLINEIGGTVIAFRYADGMLDEIQTVAADTVNA-QGSGDIHLSPDGKYLYASNRLKAD-GVAIFKVDE 291 (361)
T ss_dssp EEEEECTTSSEEEEEETTTCEEEEEEEETTEEEEEEEEESCSSCC-CCEEEEEECTTSSEEEEEECSSSC-EEEEEEECT
T ss_pred eEEEEcCCCCEEEEEcCCCCeEEEEEecCCceEEeEEEecCCCCC-CCcccEEECCCCCEEEEECCCCCC-EEEEEEEcC
Confidence 455654 675 66666 4678999998765554332111111100 001122233578876665544 33 799999987
Q ss_pred CCCCEEEcccC
Q 041774 282 IKENWVEVNRL 292 (382)
Q Consensus 282 ~~~~W~~v~~L 292 (382)
..+++..+..+
T Consensus 292 ~~g~~~~~~~~ 302 (361)
T 3scy_A 292 TNGTLTKVGYQ 302 (361)
T ss_dssp TTCCEEEEEEE
T ss_pred CCCcEEEeeEe
Confidence 66776665443
No 36
>3jro_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum, transport, membrane, mRNA transport; 4.00A {Saccharomyces cerevisiae}
Probab=44.24 E-value=2.6e+02 Score=28.07 Aligned_cols=51 Identities=10% Similarity=0.211 Sum_probs=30.6
Q ss_pred EEEEEecCCCceEEeec-CCcccccceEEEEC---C-EEEEEeeCCeEEEEEcCCC
Q 041774 182 CISTCKPGERTWTRHFF-DGFYGDLHGLTYLR---G-VLYCSFCNNVLGAFRVSTN 232 (382)
Q Consensus 182 ~i~~~r~gd~~W~~~~~-~~~~~~~~d~v~~~---G-~~Y~l~~~g~l~~~d~~~~ 232 (382)
.|.+|...+..|..+.. ......+..+.+.. | .++..+.+|.|.+||+...
T Consensus 78 ~I~vwd~~~~~~~~~~~~~~h~~~V~~v~~sp~~~~~~l~sgs~dg~I~vwdl~~~ 133 (753)
T 3jro_A 78 KVLIWKEENGRWSQIAVHAVHSASVNSVQWAPHEYGPLLLVASSDGKVSVVEFKEN 133 (753)
T ss_dssp CEEEEEEETTEEEEEEEECCCSSCEEEEEECCGGGCSEEEEEETTSEEEEEECCSS
T ss_pred eEEEEECCCCcccccccccCCCCCeEEEEECCCCCCCEEEEEeCCCcEEEEEeecC
Confidence 35567666666655421 11223455666652 4 5555667899999998764
No 37
>3jrp_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum; 2.60A {Saccharomyces cerevisiae}
Probab=43.11 E-value=1.7e+02 Score=25.55 Aligned_cols=51 Identities=10% Similarity=0.211 Sum_probs=30.4
Q ss_pred EEEEEecCCCceEEeec-CCcccccceEEEEC---C-EEEEEeeCCeEEEEEcCCC
Q 041774 182 CISTCKPGERTWTRHFF-DGFYGDLHGLTYLR---G-VLYCSFCNNVLGAFRVSTN 232 (382)
Q Consensus 182 ~i~~~r~gd~~W~~~~~-~~~~~~~~d~v~~~---G-~~Y~l~~~g~l~~~d~~~~ 232 (382)
.|.+|...+..|..+.. ......+..+.+.. | .+++.+.+|.|..||+...
T Consensus 80 ~v~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~d~~i~v~d~~~~ 135 (379)
T 3jrp_A 80 KVLIWKEENGRWSQIAVHAVHSASVNSVQWAPHEYGPLLLVASSDGKVSVVEFKEN 135 (379)
T ss_dssp CEEEEEEETTEEEEEEEECCCSSCEEEEEECCGGGCSEEEEEETTSEEEEEECCTT
T ss_pred EEEEEEcCCCceeEeeeecCCCcceEEEEeCCCCCCCEEEEecCCCcEEEEecCCC
Confidence 35567666666655421 21223455666652 4 4555667899999999764
No 38
>1tl2_A L10, protein (tachylectin-2); animal lectin, horseshoe CRAB, N-acetylglucosamine, beta- propeller, sugar binding protein; HET: NDG; 2.00A {Tachypleus tridentatus} SCOP: b.67.1.1 PDB: 3kif_A* 3kih_A*
Probab=40.13 E-value=40 Score=29.16 Aligned_cols=27 Identities=22% Similarity=0.109 Sum_probs=23.5
Q ss_pred ccceEEEE-CCEEEEEeeCCeEEEEEcCC
Q 041774 204 DLHGLTYL-RGVLYCSFCNNVLGAFRVST 231 (382)
Q Consensus 204 ~~~d~v~~-~G~~Y~l~~~g~l~~~d~~~ 231 (382)
.+.+++++ +|.+|++ ..|.|+.+++..
T Consensus 42 ~~~~laf~P~G~LYaV-~~G~Ly~~~~~t 69 (236)
T 1tl2_A 42 NFKFLFLSPGGELYGV-LNDKIYKGTPPT 69 (236)
T ss_dssp TCSEEEECTTSCEEEE-ETTEEEEESCCC
T ss_pred cceeEEECCCccEEEE-eCCeEEEECCCC
Confidence 56788998 9999999 899999999854
No 39
>3lrv_A PRE-mRNA-splicing factor 19; PRP19, WD40, E3 ubiquitin ligase, spliceosome, DNA damage, D repair, mRNA processing, nucleus; 2.60A {Saccharomyces cerevisiae}
Probab=39.66 E-value=1.9e+02 Score=25.26 Aligned_cols=147 Identities=12% Similarity=0.170 Sum_probs=73.2
Q ss_pred CceEEEEcCCCCceeeCCCCc-ccCcceEEEcCCCCCCCeEEEEEEEeeCCCeEEEEEEecCCCce--EEeecCCccccc
Q 041774 129 PSSLFFYNPFSASIIELPPLH-MFSSDKATFSTAPTSLFCTVFVLSVYYSTRRICISTCKPGERTW--TRHFFDGFYGDL 205 (382)
Q Consensus 129 ~~~~~l~NP~T~~~i~LP~~~-~~~~~~v~~s~~p~s~~~~v~~i~~~~~~~~~~i~~~r~gd~~W--~~~~~~~~~~~~ 205 (382)
.+.+.++|.-+++.+.+-... ......+.|+.+ + ..++... .++ .|.+|...+..- ..+... ....+
T Consensus 148 dg~i~~wd~~~~~~~~~~~~~~~~~i~~~~~~pd--g---~~lasg~-~dg---~i~iwd~~~~~~~~~~~~~~-h~~~v 217 (343)
T 3lrv_A 148 RGTIGFQSYEDDSQYIVHSAKSDVEYSSGVLHKD--S---LLLALYS-PDG---ILDVYNLSSPDQASSRFPVD-EEAKI 217 (343)
T ss_dssp TCCEEEEESSSSCEEEEECCCSSCCCCEEEECTT--S---CEEEEEC-TTS---CEEEEESSCTTSCCEECCCC-TTSCE
T ss_pred CCcEEEEECCCCcEEEEEecCCCCceEEEEECCC--C---CEEEEEc-CCC---EEEEEECCCCCCCccEEecc-CCCCE
Confidence 368889998888764432111 111344556432 1 2333332 222 344555443322 122110 11345
Q ss_pred ceEEEE-CCEEEEEeeCCeEEEEEcCCCCe-EEeccCCCCCCcceeeceeEEEEeCCcEEEEEEeCCCceEEEEEEEcCC
Q 041774 206 HGLTYL-RGVLYCSFCNNVLGAFRVSTNSW-KIYPHNRIRPTSVYLYYGLIESEHEGSLLSVYYDSHRLQWLVFRFDLIK 283 (382)
Q Consensus 206 ~d~v~~-~G~~Y~l~~~g~l~~~d~~~~~~-~~~~~p~~~~~~~~~~~~~~LVe~~G~LllV~~~~~~~~~~V~~ld~~~ 283 (382)
..+.+. +|.+.+...++.|..||+..... ..+.. ....... ......-....|+.+++...... .+.||.++...
T Consensus 218 ~~l~fs~~g~~l~s~~~~~v~iwd~~~~~~~~~~~~-~~~~~~~-~~~~~~~~~~~g~~l~~~s~~d~-~i~v~~~~~~~ 294 (343)
T 3lrv_A 218 KEVKFADNGYWMVVECDQTVVCFDLRKDVGTLAYPT-YTIPEFK-TGTVTYDIDDSGKNMIAYSNESN-SLTIYKFDKKT 294 (343)
T ss_dssp EEEEECTTSSEEEEEESSBEEEEETTSSTTCBSSCC-CBC------CCEEEEECTTSSEEEEEETTTT-EEEEEEECTTT
T ss_pred EEEEEeCCCCEEEEEeCCeEEEEEcCCCCcceeecc-ccccccc-ccceEEEECCCCCEEEEecCCCC-cEEEEEEcccc
Confidence 566664 67666666677999999976421 11110 0000000 00111223346777776554233 79999998888
Q ss_pred CCEEE
Q 041774 284 ENWVE 288 (382)
Q Consensus 284 ~~W~~ 288 (382)
..|..
T Consensus 295 ~~~~~ 299 (343)
T 3lrv_A 295 KNWTK 299 (343)
T ss_dssp CSEEE
T ss_pred cceEe
Confidence 88987
No 40
>2biw_A Apocarotenoid-cleaving oxygenase; non-heme iron, carotenoid cleavage, retinal forma oxidoreductase, dioxygenase; HET: 3ON; 2.39A {Synechocystis SP} PDB: 2bix_A*
Probab=35.10 E-value=1.4e+02 Score=28.82 Aligned_cols=77 Identities=10% Similarity=-0.002 Sum_probs=45.8
Q ss_pred ccceEEEECCEEEEEeeCCeEEEEEcCC-CCeEEeccCCCC-CCcceeeceeEEEE-e------CCcEEEEEEeCCCc-e
Q 041774 204 DLHGLTYLRGVLYCSFCNNVLGAFRVST-NSWKIYPHNRIR-PTSVYLYYGLIESE-H------EGSLLSVYYDSHRL-Q 273 (382)
Q Consensus 204 ~~~d~v~~~G~~Y~l~~~g~l~~~d~~~-~~~~~~~~p~~~-~~~~~~~~~~~LVe-~------~G~LllV~~~~~~~-~ 273 (382)
.-.++++++|++|++.+.|..+.+|+.+ ++.......... +. .....+. -++ . .|+|+-+....... .
T Consensus 134 aNT~v~~~~g~llAl~E~~~p~~ldp~tLeT~G~~d~~g~l~~~-~~~tAHP-k~Dp~~~~~~gtgel~~fg~~~~~~~~ 211 (490)
T 2biw_A 134 ANTNITYWGDRLLALWEGGQPHRLEPSNLATIGLDDLGGILAEG-QPLSAHP-RIDPASTFDGGQPCYVTFSIKSSLSST 211 (490)
T ss_dssp CCSEEEEETTEEEEECTTSCCEEECTTTCCEEEECCTTTTSCTT-CCCCSCC-EEESSCTTTTTCCEEEEEEEEESSEEE
T ss_pred CEEEEEEECCEEEEEEcCCCCEecccccccEeeeeccCCcccCC-cccccCc-eECccccccCCCCeEEEEEecCCCCcE
Confidence 3567899999999999999999999843 444333211101 10 0011122 234 3 45888777654322 5
Q ss_pred EEEEEEEcC
Q 041774 274 WLVFRFDLI 282 (382)
Q Consensus 274 ~~V~~ld~~ 282 (382)
+.+|+++.+
T Consensus 212 ~~~~~~~~~ 220 (490)
T 2biw_A 212 LTLLELDPQ 220 (490)
T ss_dssp EEEEEECTT
T ss_pred EEEEEECCC
Confidence 788998864
No 41
>2z2n_A Virginiamycin B lyase; seven-bladed beta-propeller, antibiotic resistance, E mechanism, virginiamycin B hydrolase streptogramin; HET: MSE; 1.65A {Staphylococcus aureus} PDB: 2z2o_A 2z2p_A*
Probab=35.08 E-value=2e+02 Score=24.09 Aligned_cols=28 Identities=11% Similarity=0.353 Sum_probs=19.9
Q ss_pred cceEEEECCEEEEEeeCCeEEEEEcCCC
Q 041774 205 LHGLTYLRGVLYCSFCNNVLGAFRVSTN 232 (382)
Q Consensus 205 ~~d~v~~~G~~Y~l~~~g~l~~~d~~~~ 232 (382)
...+++.+|.+|+.+..+.|..||+..+
T Consensus 269 ~~~i~~~~g~l~v~~~~~~l~~~~~~~~ 296 (299)
T 2z2n_A 269 PHGICFDGETIWFAMECDKIGKLTLIKD 296 (299)
T ss_dssp EEEEEECSSCEEEEETTTEEEEEEEC--
T ss_pred cceEEecCCCEEEEecCCcEEEEEcCcc
Confidence 3445557789998877788999988764
No 42
>3dsm_A Uncharacterized protein bacuni_02894; seven_blated beta propeller, structural genomics, PSI-2, Pro structure initiative; 1.90A {Bacteroides uniformis}
Probab=33.41 E-value=2.5e+02 Score=24.64 Aligned_cols=30 Identities=7% Similarity=-0.040 Sum_probs=23.6
Q ss_pred cceEEE-ECCEEEEEe-eCCeEEEEEcCCCCe
Q 041774 205 LHGLTY-LRGVLYCSF-CNNVLGAFRVSTNSW 234 (382)
Q Consensus 205 ~~d~v~-~~G~~Y~l~-~~g~l~~~d~~~~~~ 234 (382)
...+++ .+|++|+.+ ..+.|.++|+...+.
T Consensus 86 p~~i~~~~~g~lyv~~~~~~~v~~iD~~t~~~ 117 (328)
T 3dsm_A 86 PRYIHFLSDEKAYVTQIWDYRIFIINPKTYEI 117 (328)
T ss_dssp EEEEEEEETTEEEEEEBSCSEEEEEETTTTEE
T ss_pred CcEEEEeCCCeEEEEECCCCeEEEEECCCCeE
Confidence 445666 789999998 678999999987543
No 43
>3q7m_A Lipoprotein YFGL, BAMB; beta-propeller, BAM complex, outer membrane protein folding, negative, BAMA, protein binding; 1.65A {Escherichia coli} PDB: 3q7n_A 3q7o_A 3p1l_A 3prw_A 2yh3_A 3q54_A
Probab=32.68 E-value=2.6e+02 Score=24.75 Aligned_cols=12 Identities=17% Similarity=0.013 Sum_probs=6.5
Q ss_pred ceEEEEcCCCCc
Q 041774 130 SSLFFYNPFSAS 141 (382)
Q Consensus 130 ~~~~l~NP~T~~ 141 (382)
+.++.+|+-||+
T Consensus 249 g~l~~~d~~tG~ 260 (376)
T 3q7m_A 249 GNLTALDLRSGQ 260 (376)
T ss_dssp SCEEEEETTTCC
T ss_pred cEEEEEECCCCc
Confidence 345555655555
No 44
>3u4y_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomi CS, MCSG; 2.99A {Desulfotomaculum acetoxidans}
Probab=29.63 E-value=2.7e+02 Score=23.85 Aligned_cols=92 Identities=8% Similarity=-0.044 Sum_probs=45.0
Q ss_pred CceEEEEcCCCCceeeCCCCcccCcceEEEcCCCCCCCeEEEEEEEeeCCCeEEEEEEecCCCce--EEeecCCcccccc
Q 041774 129 PSSLFFYNPFSASIIELPPLHMFSSDKATFSTAPTSLFCTVFVLSVYYSTRRICISTCKPGERTW--TRHFFDGFYGDLH 206 (382)
Q Consensus 129 ~~~~~l~NP~T~~~i~LP~~~~~~~~~v~~s~~p~s~~~~v~~i~~~~~~~~~~i~~~r~gd~~W--~~~~~~~~~~~~~ 206 (382)
.+.+.++|+-|++.+..-....... .++++.+ . .. +++... .. ..|..+...+..- ..+... ....
T Consensus 19 ~~~v~~~d~~~~~~~~~~~~~~~~~-~~~~s~d--g-~~-l~~~~~--~~--~~i~~~d~~~~~~~~~~~~~~---~~~~ 86 (331)
T 3u4y_A 19 LRRISFFSTDTLEILNQITLGYDFV-DTAITSD--C-SN-VVVTSD--FC--QTLVQIETQLEPPKVVAIQEG---QSSM 86 (331)
T ss_dssp GTEEEEEETTTCCEEEEEECCCCEE-EEEECSS--S-CE-EEEEES--TT--CEEEEEECSSSSCEEEEEEEC---SSCC
T ss_pred CCeEEEEeCcccceeeeEEccCCcc-eEEEcCC--C-CE-EEEEeC--CC--CeEEEEECCCCceeEEecccC---CCCc
Confidence 4689999999988643221221112 4555432 2 22 333222 12 2555666544432 222111 1223
Q ss_pred e-EEEE-CCE-EEEEeeCC----eEEEEEcCCCC
Q 041774 207 G-LTYL-RGV-LYCSFCNN----VLGAFRVSTNS 233 (382)
Q Consensus 207 d-~v~~-~G~-~Y~l~~~g----~l~~~d~~~~~ 233 (382)
. +++. +|+ +| ....+ .|.++|+...+
T Consensus 87 ~~~~~s~dg~~l~-~~~~~~~~~~i~v~d~~~~~ 119 (331)
T 3u4y_A 87 ADVDITPDDQFAV-TVTGLNHPFNMQSYSFLKNK 119 (331)
T ss_dssp CCEEECTTSSEEE-ECCCSSSSCEEEEEETTTTE
T ss_pred cceEECCCCCEEE-EecCCCCcccEEEEECCCCC
Confidence 3 5554 565 56 44333 89999997653
No 45
>2xbg_A YCF48-like protein; photosynthesis, photosystem II, beta-propeller, assembly FAC; 1.50A {Thermosynechococcus elongatus}
Probab=29.57 E-value=2.9e+02 Score=24.29 Aligned_cols=92 Identities=13% Similarity=0.107 Sum_probs=53.0
Q ss_pred CCCceEEeecCC--cccccceEEEECCEEEEEeeCCeEEEEEcCCCCeEEeccCCCCCCcceeeceeEEE-EeCCcEEEE
Q 041774 189 GERTWTRHFFDG--FYGDLHGLTYLRGVLYCSFCNNVLGAFRVSTNSWKIYPHNRIRPTSVYLYYGLIES-EHEGSLLSV 265 (382)
Q Consensus 189 gd~~W~~~~~~~--~~~~~~d~v~~~G~~Y~l~~~g~l~~~d~~~~~~~~~~~p~~~~~~~~~~~~~~LV-e~~G~LllV 265 (382)
|...|+.+..+. ....+.++.+..+.+|++...|.|+.-+=.+++|+.+..+...+. ....++ ...|.++++
T Consensus 64 gG~tW~~~~~~~~~~~~~~~~i~~~~~~~~~~g~~g~i~~S~DgG~tW~~~~~~~~~~~-----~~~~i~~~~~~~~~~~ 138 (327)
T 2xbg_A 64 GGQTWEPRTLVLDHSDYRFNSVSFQGNEGWIVGEPPIMLHTTDGGQSWSQIPLDPKLPG-----SPRLIKALGNGSAEMI 138 (327)
T ss_dssp TTSSCEECCCCCSCCCCEEEEEEEETTEEEEEEETTEEEEESSTTSSCEECCCCTTCSS-----CEEEEEEEETTEEEEE
T ss_pred CCCCCeECCCCCCCCCccEEEEEecCCeEEEEECCCeEEEECCCCCCceECccccCCCC-----CeEEEEEECCCCEEEE
Confidence 346899875321 112466777888899998888877664334578998764321121 111122 345666655
Q ss_pred EEeCCCceEEEEEEEcCCCCEEEcc
Q 041774 266 YYDSHRLQWLVFRFDLIKENWVEVN 290 (382)
Q Consensus 266 ~~~~~~~~~~V~~ld~~~~~W~~v~ 290 (382)
.. . =.||+-+.....|.++.
T Consensus 139 ~~---~--g~v~~S~DgG~tW~~~~ 158 (327)
T 2xbg_A 139 TN---V--GAIYRTKDSGKNWQALV 158 (327)
T ss_dssp ET---T--CCEEEESSTTSSEEEEE
T ss_pred eC---C--ccEEEEcCCCCCCEEee
Confidence 41 1 13566655566787764
No 46
>2xzh_A Clathrin heavy chain 1; endocytosis, endocytosis inhibition; HET: VH2; 1.69A {Homo sapiens} PDB: 2xzg_A* 3gc3_B 1utc_A 3gd1_I 1c9i_A 1c9l_A
Probab=27.33 E-value=90 Score=28.76 Aligned_cols=57 Identities=18% Similarity=0.219 Sum_probs=35.7
Q ss_pred ECCEEEEEeeCCeEEEEEcCCCCeEEeccCCCCCCc------ceeeceeEEEEeCCcEEEEEEeC
Q 041774 211 LRGVLYCSFCNNVLGAFRVSTNSWKIYPHNRIRPTS------VYLYYGLIESEHEGSLLSVYYDS 269 (382)
Q Consensus 211 ~~G~~Y~l~~~g~l~~~d~~~~~~~~~~~p~~~~~~------~~~~~~~~LVe~~G~LllV~~~~ 269 (382)
.-|.+|.+|..|.|+.||+.+.+.--.. .+..+. .....+..-|.-+|+++.|....
T Consensus 270 kygviyviTK~G~ihlyDleTgt~i~~n--rIS~d~iF~ta~~~~~~Gi~~Vnr~GqVl~v~v~~ 332 (365)
T 2xzh_A 270 KHDVVFLITKYGYIHLYDLETGTCIYMN--RISGETIFVTAPHEATAGIIGVNRKGQVLSVCVEE 332 (365)
T ss_dssp TTTEEEEEETTSEEEEEETTTCCEEEEE--ECCSSCEEEEEEEGGGTEEEEEETTCEEEEEEECT
T ss_pred cCCEEEEEeCCcEEEEEEcccCcEEEEe--ccCCCceEEecccCCCCcEEEEcCCCEEEEEEECc
Confidence 3599999999999999999876431111 111110 00113445666778888887654
No 47
>3b7f_A Glycosyl hydrolase, BNR repeat; 7-bladed beta-propeller fold, structural genomics, joint CEN structural genomics, JCSG; 2.20A {Ralstonia eutropha}
Probab=26.36 E-value=3.6e+02 Score=24.29 Aligned_cols=104 Identities=10% Similarity=-0.044 Sum_probs=57.2
Q ss_pred EEEEecCC--CceEEeecCCcccccceEEEE---CCEEEEEeeCC----eEEEEEcCCCCeEEeccCCCCCCcc------
Q 041774 183 ISTCKPGE--RTWTRHFFDGFYGDLHGLTYL---RGVLYCSFCNN----VLGAFRVSTNSWKIYPHNRIRPTSV------ 247 (382)
Q Consensus 183 i~~~r~gd--~~W~~~~~~~~~~~~~d~v~~---~G~~Y~l~~~g----~l~~~d~~~~~~~~~~~p~~~~~~~------ 247 (382)
+.+++..+ ..|+.+........+..+++. .|.+|+.+..| .|+..+-.+.+|+.+..+...+...
T Consensus 33 l~~~~~~~~g~~W~~~~~~~~~~~v~~i~~dp~~~~~l~~g~~~g~~g~gl~~s~D~G~tW~~~~~~~~~~~~~~~~~~~ 112 (394)
T 3b7f_A 33 AWFLASDPARRTWELRGPVFLGHTIHHIVQDPREPERMLMAARTGHLGPTVFRSDDGGGNWTEATRPPAFNKAPEGETGR 112 (394)
T ss_dssp EEEEEECTTSCSEEEEEEESTTSEEEEEEECSSSTTCEEEEEEC--CCEEEEEESSTTSCCEECSBCCCCCCCC----CC
T ss_pred eEEEECCCCCCCceECCccCCCCceEEEEECCCCCCeEEEEecCCCCCccEEEeCCCCCCceECCccccCCCcccccccc
Confidence 45566544 789976311111235556654 68999998877 6777665667898875432111000
Q ss_pred eeeceeEEEEe----CCcEEEEEEeCCCceEEEEEEEcCCCCEEEccc
Q 041774 248 YLYYGLIESEH----EGSLLSVYYDSHRLQWLVFRFDLIKENWVEVNR 291 (382)
Q Consensus 248 ~~~~~~~LVe~----~G~LllV~~~~~~~~~~V~~ld~~~~~W~~v~~ 291 (382)
....-..|+.. .+.|+++... -.||+.+.....|.++..
T Consensus 113 ~~~~i~~l~~~~~~~~~~l~~g~~~-----ggl~~S~DgG~tW~~~~~ 155 (394)
T 3b7f_A 113 VVDHVFWLTPGHASEPGTWYAGTSP-----QGLFRSTDHGASWEPVAG 155 (394)
T ss_dssp CCCEEEEEEECCTTSTTCEEEEEET-----TEEEEESSTTSBCEECHH
T ss_pred cccceeEEEeCCCCCCCEEEEEecC-----CcEEEEcCCCCCeEECcC
Confidence 00011124332 5666665431 247788777788888753
No 48
>1rwi_B Serine/threonine-protein kinase PKND; beta propeller, structural genomics, PSI, protein structure initiative; 1.80A {Mycobacterium tuberculosis} SCOP: b.68.9.1 PDB: 1rwl_A
Probab=26.23 E-value=2.7e+02 Score=22.89 Aligned_cols=177 Identities=9% Similarity=0.043 Sum_probs=0.0
Q ss_pred ceeeeecCCCcEEEecCCCcCCCCeEEEcCCceEEEEecCCCCCCceeeeccCCCceEEEEcCCCCceeeCCCCcccCcc
Q 041774 75 ISHLFDTTHKLKYTIKTDPRVLHSKIKASKDGWVLFSKANINPSPFLFISYNSSPSSLFFYNPFSASIIELPPLHMFSSD 154 (382)
Q Consensus 75 ~~~~~~~~~~~~~~~~l~p~~~~~~~~gs~~GwL~~~~~~~~~~~~~~~~~~~~~~~~~l~NP~T~~~i~LP~~~~~~~~ 154 (382)
....|++..+....+..........+.-..+|-|++++.. .+.++.+++-+...............
T Consensus 88 ~i~~~d~~~~~~~~~~~~~~~~p~~i~~~~~g~l~v~~~~--------------~~~i~~~~~~~~~~~~~~~~~~~~p~ 153 (270)
T 1rwi_B 88 RVVTLAAGSNNQTVLPFDGLNYPEGLAVDTQGAVYVADRG--------------NNRVVKLAAGSKTQTVLPFTGLNDPD 153 (270)
T ss_dssp EEEEECTTCSCCEECCCCSCSSEEEEEECTTCCEEEEEGG--------------GTEEEEECTTCCSCEECCCCSCCSCC
T ss_pred EEEEEeCCCceEeeeecCCcCCCcceEECCCCCEEEEECC--------------CCEEEEEECCCceeEeeccccCCCce
Q ss_pred eEEEcCCCCCCCeEEEEEEEeeCCCeEEEEEEecCCCceEEeecCCcccccceEEEE-CCEEEEEe-eCCeEEEEEcCCC
Q 041774 155 KATFSTAPTSLFCTVFVLSVYYSTRRICISTCKPGERTWTRHFFDGFYGDLHGLTYL-RGVLYCSF-CNNVLGAFRVSTN 232 (382)
Q Consensus 155 ~v~~s~~p~s~~~~v~~i~~~~~~~~~~i~~~r~gd~~W~~~~~~~~~~~~~d~v~~-~G~~Y~l~-~~g~l~~~d~~~~ 232 (382)
.++++.+ +. +.+... ..+ .|..+......-........ .....+++. +|.+|+.+ ..+.|..||+.+.
T Consensus 154 ~i~~~~~----g~-l~v~~~-~~~---~i~~~~~~~~~~~~~~~~~~-~~p~~i~~d~~g~l~v~~~~~~~v~~~~~~~~ 223 (270)
T 1rwi_B 154 GVAVDNS----GN-VYVTDT-DNN---RVVKLEAESNNQVVLPFTDI-TAPWGIAVDEAGTVYVTEHNTNQVVKLLAGST 223 (270)
T ss_dssp CEEECTT----CC-EEEEEG-GGT---EEEEECTTTCCEEECCCSSC-CSEEEEEECTTCCEEEEETTTSCEEEECTTCS
T ss_pred eEEEeCC----CC-EEEEEC-CCC---EEEEEecCCCceEeecccCC-CCceEEEECCCCCEEEEECCCCcEEEEcCCCC
Q ss_pred CeEEeccCCCCCCcceeeceeEEEEeCCcEEEEEEeCCCceEEEEEEEcCC
Q 041774 233 SWKIYPHNRIRPTSVYLYYGLIESEHEGSLLSVYYDSHRLQWLVFRFDLIK 283 (382)
Q Consensus 233 ~~~~~~~p~~~~~~~~~~~~~~LVe~~G~LllV~~~~~~~~~~V~~ld~~~ 283 (382)
............ -....+..+|.|++.....+. +.+|+++++.
T Consensus 224 ~~~~~~~~~~~~------p~~i~~~~~g~l~v~~~~~~~--v~~~~~~~~~ 266 (270)
T 1rwi_B 224 TSTVLPFTGLNT------PLAVAVDSDRTVYVADRGNDR--VVKLTSLEHH 266 (270)
T ss_dssp CCEECCCCSCSC------EEEEEECTTCCEEEEEGGGTE--EEEECCCGGG
T ss_pred cceeeccCCCCC------ceeEEECCCCCEEEEECCCCE--EEEEcCCCcc
No 49
>3npe_A 9-CIS-epoxycarotenoid dioxygenase 1, chloroplasti; seven blade beta propeller, abscisic acid, non iron, oxidoreductase; 3.20A {Zea mays}
Probab=24.44 E-value=1.2e+02 Score=29.66 Aligned_cols=79 Identities=16% Similarity=0.135 Sum_probs=40.7
Q ss_pred ccceEEEECCEEEEEeeCCeEEEEEcCC-CCeEEeccCCCCCCcceeeceeEEEEe-CCcEEEEEEeCCC-ceEEEEEEE
Q 041774 204 DLHGLTYLRGVLYCSFCNNVLGAFRVST-NSWKIYPHNRIRPTSVYLYYGLIESEH-EGSLLSVYYDSHR-LQWLVFRFD 280 (382)
Q Consensus 204 ~~~d~v~~~G~~Y~l~~~g~l~~~d~~~-~~~~~~~~p~~~~~~~~~~~~~~LVe~-~G~LllV~~~~~~-~~~~V~~ld 280 (382)
.-.++++++|++|++.+.|.-+..+++. .+.+.+..-.............--++. .|+|+-....... ..+.+|+++
T Consensus 173 ANtnvv~~~g~llAl~E~g~Py~~~idp~~tLeT~G~~d~~g~l~~~~tAHPk~Dp~TGel~~f~y~~~~~p~~~~~~~~ 252 (529)
T 3npe_A 173 ANAGLVYFNGRLLAMSEDDLPYHVRVADDGDLETVGRYDFDGQLGCAMIAHPKLDPATGELHALSYDVIKRPYLKYFYFR 252 (529)
T ss_dssp CCSCEEEETTEEEECCTTSCCEEEEECTTSCEEEEEECCGGGCCCSCCCSCCEECTTTCCEEEEECCSSSSCCCEEEEEC
T ss_pred CeEEEEEECCEEEEEEcCCCceEEecCCCCCcceeeeeccCCccCCcccccCcCCCCCCcEEEEEeecCCCCcEEEEEEC
Confidence 3467999999999999887665554333 234333211100000000011122343 4887766543222 257778887
Q ss_pred cC
Q 041774 281 LI 282 (382)
Q Consensus 281 ~~ 282 (382)
.+
T Consensus 253 ~~ 254 (529)
T 3npe_A 253 PD 254 (529)
T ss_dssp TT
T ss_pred CC
Confidence 54
No 50
>3sjl_D Methylamine dehydrogenase heavy chain; MAUG, C-heme, quinone cofactor, oxidoreductase-electron transport complex; HET: 0AF HEC MES; 1.63A {Paracoccus denitrificans} PDB: 2gc7_A* 2j55_H* 2j56_H* 2j57_G* 3l4m_D* 3l4o_D* 3orv_D* 3pxs_D* 3pxt_D* 3rlm_D* 2gc4_A* 3rn0_D* 3rn1_D* 3rmz_D* 3svw_D* 3sws_D* 3sxt_D* 3pxw_D* 3sle_D* 1mg2_A* ...
Probab=23.34 E-value=3.1e+02 Score=25.33 Aligned_cols=83 Identities=8% Similarity=0.003 Sum_probs=45.7
Q ss_pred CCEEEEEeeCCeEEEEEcCCCCeEEeccCC------CCCCcceeeceeEEEEeCC-cEEEEEEeCC----C-ceEEEEEE
Q 041774 212 RGVLYCSFCNNVLGAFRVSTNSWKIYPHNR------IRPTSVYLYYGLIESEHEG-SLLSVYYDSH----R-LQWLVFRF 279 (382)
Q Consensus 212 ~G~~Y~l~~~g~l~~~d~~~~~~~~~~~p~------~~~~~~~~~~~~~LVe~~G-~LllV~~~~~----~-~~~~V~~l 279 (382)
+|++++++..|.++++|..++..+++..-. +.+..........-+..+| +|++...... + ..=+|+.+
T Consensus 237 dG~~~~vs~~g~V~v~d~~~~~~~v~~~~~~~~~~~~~~g~~p~g~q~~a~~~~~~~lyV~~~~~~~~~hk~~~~~V~vi 316 (386)
T 3sjl_D 237 AGRLVWPTYTGKIHQIDLSSGDAKFLPAVEALTEAERADGWRPGGWQQVAYHRALDRIYLLVDQRDEWRHKTASRFVVVL 316 (386)
T ss_dssp TTEEEEEBTTSEEEEEECTTSSCEECCCEESSCHHHHHTTEEECSSSCEEEETTTTEEEEEEEECCTTCTTSCEEEEEEE
T ss_pred CCcEEEEeCCCEEEEEECCCCcceeecceeccccccccccccCCCcceeeECCCCCeEEEEeccccccccCCCCCEEEEE
Confidence 789999999999999999876544332100 0000000001223344444 4554443221 1 24689999
Q ss_pred EcCCCCEEEcccCCC
Q 041774 280 DLIKENWVEVNRLDD 294 (382)
Q Consensus 280 d~~~~~W~~v~~Lg~ 294 (382)
|.++++-++--.+|.
T Consensus 317 D~~t~kv~~~i~vg~ 331 (386)
T 3sjl_D 317 DAKTGERLAKFEMGH 331 (386)
T ss_dssp ETTTCCEEEEEEEEE
T ss_pred ECCCCeEEEEEECCC
Confidence 998877665544554
No 51
>2hqs_A Protein TOLB; TOLB, PAL, TOL, transport protein-lipoprotein complex; 1.50A {Escherichia coli} SCOP: b.68.4.1 c.51.2.1 PDB: 3iax_A 1c5k_A 2ivz_A 2w8b_B 2w8b_A 1crz_A
Probab=23.31 E-value=4.2e+02 Score=24.04 Aligned_cols=176 Identities=7% Similarity=0.019 Sum_probs=0.0
Q ss_pred eEEEcCCceEEEEecCCCCCCceeeeccCCCceEEEEcCCCCceeeCCCCcccCcceEEEcCCCCCCCeEEEEEEEeeCC
Q 041774 99 KIKASKDGWVLFSKANINPSPFLFISYNSSPSSLFFYNPFSASIIELPPLHMFSSDKATFSTAPTSLFCTVFVLSVYYST 178 (382)
Q Consensus 99 ~~~gs~~GwL~~~~~~~~~~~~~~~~~~~~~~~~~l~NP~T~~~i~LP~~~~~~~~~v~~s~~p~s~~~~v~~i~~~~~~ 178 (382)
+.+....+.+....-..+|+...+.++......++++|.-|++...+...... ...+.|+.+ +..++.... ..
T Consensus 172 ~~l~~~~~~v~~~~~Spdg~~la~~s~~~~~~~i~~~d~~tg~~~~l~~~~~~-~~~~~~spd----g~~la~~~~--~~ 244 (415)
T 2hqs_A 172 FVVHRSPQPLMSPAWSPDGSKLAYVTFESGRSALVIQTLANGAVRQVASFPRH-NGAPAFSPD----GSKLAFALS--KT 244 (415)
T ss_dssp EEEEEESSCEEEEEECTTSSEEEEEECTTSSCEEEEEETTTCCEEEEECCSSC-EEEEEECTT----SSEEEEEEC--TT
T ss_pred EEEeCCCCcceeeEEcCCCCEEEEEEecCCCcEEEEEECCCCcEEEeecCCCc-ccCEEEcCC----CCEEEEEEe--cC
Q ss_pred CeEEEEEEecCCCceEEeecCCcccccceEEEE-CCEEEEEeeCC----eEEEEEcCCCCeEEeccCCCCCCcceeecee
Q 041774 179 RRICISTCKPGERTWTRHFFDGFYGDLHGLTYL-RGVLYCSFCNN----VLGAFRVSTNSWKIYPHNRIRPTSVYLYYGL 253 (382)
Q Consensus 179 ~~~~i~~~r~gd~~W~~~~~~~~~~~~~d~v~~-~G~~Y~l~~~g----~l~~~d~~~~~~~~~~~p~~~~~~~~~~~~~ 253 (382)
....|..+.......+.+ .........+.+. +|+..+..... .|+.+|+.......+...... ...
T Consensus 245 g~~~i~~~d~~~~~~~~l--~~~~~~~~~~~~spdg~~l~~~s~~~g~~~i~~~d~~~~~~~~l~~~~~~-------~~~ 315 (415)
T 2hqs_A 245 GSLNLYVMDLASGQIRQV--TDGRSNNTEPTWFPDSQNLAFTSDQAGRPQVYKVNINGGAPQRITWEGSQ-------NQD 315 (415)
T ss_dssp SSCEEEEEETTTCCEEEC--CCCSSCEEEEEECTTSSEEEEEECTTSSCEEEEEETTSSCCEECCCSSSE-------EEE
T ss_pred CCceEEEEECCCCCEEeC--cCCCCcccceEECCCCCEEEEEECCCCCcEEEEEECCCCCEEEEecCCCc-------ccC
Q ss_pred EEEEeCCcEEEEEEeCCCceEEEEEEEcCCCCEEEccc
Q 041774 254 IESEHEGSLLSVYYDSHRLQWLVFRFDLIKENWVEVNR 291 (382)
Q Consensus 254 ~LVe~~G~LllV~~~~~~~~~~V~~ld~~~~~W~~v~~ 291 (382)
.-...+|+.+++...... ...|+.+|.++++...+..
T Consensus 316 ~~~spdG~~l~~~~~~~g-~~~i~~~d~~~~~~~~l~~ 352 (415)
T 2hqs_A 316 ADVSSDGKFMVMVSSNGG-QQHIAKQDLATGGVQVLSS 352 (415)
T ss_dssp EEECTTSSEEEEEEECSS-CEEEEEEETTTCCEEECCC
T ss_pred eEECCCCCEEEEEECcCC-ceEEEEEECCCCCEEEecC
No 52
>1p22_A F-BOX/WD-repeat protein 1A; ubiquitination, degradation, signaling protein; HET: SEP; 2.95A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1
Probab=23.08 E-value=4.2e+02 Score=23.93 Aligned_cols=90 Identities=4% Similarity=0.045 Sum_probs=46.0
Q ss_pred ceEEEEcCCCCceee-CCCCcccCcceEEEcCCCCCCCeEEEEEEEeeCCCeEEEEEEecCCCceEEeecCCcccccceE
Q 041774 130 SSLFFYNPFSASIIE-LPPLHMFSSDKATFSTAPTSLFCTVFVLSVYYSTRRICISTCKPGERTWTRHFFDGFYGDLHGL 208 (382)
Q Consensus 130 ~~~~l~NP~T~~~i~-LP~~~~~~~~~v~~s~~p~s~~~~v~~i~~~~~~~~~~i~~~r~gd~~W~~~~~~~~~~~~~d~ 208 (382)
+.+.++|.-|++.+. ++. +.. ....+..+ ... ++... .++ .|.+|...+..-... .......+..+
T Consensus 153 g~i~iwd~~~~~~~~~~~~-h~~--~v~~l~~~---~~~--l~sg~-~dg---~i~vwd~~~~~~~~~-~~~h~~~v~~l 219 (435)
T 1p22_A 153 NTIKIWDKNTLECKRILTG-HTG--SVLCLQYD---ERV--IITGS-SDS---TVRVWDVNTGEMLNT-LIHHCEAVLHL 219 (435)
T ss_dssp SCEEEEESSSCCEEEEECC-CSS--CEEEEECC---SSE--EEEEE-TTS---CEEEEESSSCCEEEE-ECCCCSCEEEE
T ss_pred CeEEEEeCCCCeEEEEEcC-CCC--cEEEEEEC---CCE--EEEEc-CCC---eEEEEECCCCcEEEE-EcCCCCcEEEE
Confidence 689999998887543 221 111 11222221 222 22222 222 344555443322111 11111345556
Q ss_pred EEECCEEEEEeeCCeEEEEEcCCC
Q 041774 209 TYLRGVLYCSFCNNVLGAFRVSTN 232 (382)
Q Consensus 209 v~~~G~~Y~l~~~g~l~~~d~~~~ 232 (382)
.+.++.+...+.+|.|..||+...
T Consensus 220 ~~~~~~l~s~s~dg~i~vwd~~~~ 243 (435)
T 1p22_A 220 RFNNGMMVTCSKDRSIAVWDMASP 243 (435)
T ss_dssp ECCTTEEEEEETTSCEEEEECSSS
T ss_pred EEcCCEEEEeeCCCcEEEEeCCCC
Confidence 666777777778899999999764
No 53
>3dsm_A Uncharacterized protein bacuni_02894; seven_blated beta propeller, structural genomics, PSI-2, Pro structure initiative; 1.90A {Bacteroides uniformis}
Probab=22.73 E-value=3.8e+02 Score=23.33 Aligned_cols=152 Identities=11% Similarity=0.075 Sum_probs=77.5
Q ss_pred CCceEEEEecCCCCCCceeeeccCCCceEEEEcCCCCcee-eCCCCcccCcceEEEcCCCCCCCeEEEEEEEeeCCCeEE
Q 041774 104 KDGWVLFSKANINPSPFLFISYNSSPSSLFFYNPFSASII-ELPPLHMFSSDKATFSTAPTSLFCTVFVLSVYYSTRRIC 182 (382)
Q Consensus 104 ~~GwL~~~~~~~~~~~~~~~~~~~~~~~~~l~NP~T~~~i-~LP~~~~~~~~~v~~s~~p~s~~~~v~~i~~~~~~~~~~ 182 (382)
.++-|+++... .+.+.++|+-|++.+ .+|.... -..++++.+ + .+.+... .. -.
T Consensus 52 ~~~~lyv~~~~--------------~~~v~viD~~t~~~~~~i~~~~~--p~~i~~~~~----g-~lyv~~~-~~---~~ 106 (328)
T 3dsm_A 52 RDGIGWIVVNN--------------SHVIFAIDINTFKEVGRITGFTS--PRYIHFLSD----E-KAYVTQI-WD---YR 106 (328)
T ss_dssp ETTEEEEEEGG--------------GTEEEEEETTTCCEEEEEECCSS--EEEEEEEET----T-EEEEEEB-SC---SE
T ss_pred ECCEEEEEEcC--------------CCEEEEEECcccEEEEEcCCCCC--CcEEEEeCC----C-eEEEEEC-CC---Ce
Confidence 35666666553 368999999999863 3543211 234455432 2 2333231 11 14
Q ss_pred EEEEecCCCceE-EeecCCc---ccccceEEEECCEEEEEee--CCeEEEEEcCCCCe-EEeccCCCCCCcceeeceeEE
Q 041774 183 ISTCKPGERTWT-RHFFDGF---YGDLHGLTYLRGVLYCSFC--NNVLGAFRVSTNSW-KIYPHNRIRPTSVYLYYGLIE 255 (382)
Q Consensus 183 i~~~r~gd~~W~-~~~~~~~---~~~~~d~v~~~G~~Y~l~~--~g~l~~~d~~~~~~-~~~~~p~~~~~~~~~~~~~~L 255 (382)
|..+...+..-. .+..... ......+++.+|++|+.+. .+.|.++|+...+. ..++... .+ ....
T Consensus 107 v~~iD~~t~~~~~~i~~g~~~~~~~~p~~i~~~~~~lyv~~~~~~~~v~viD~~t~~~~~~i~~g~-~p-------~~i~ 178 (328)
T 3dsm_A 107 IFIINPKTYEITGYIECPDMDMESGSTEQMVQYGKYVYVNCWSYQNRILKIDTETDKVVDELTIGI-QP-------TSLV 178 (328)
T ss_dssp EEEEETTTTEEEEEEECTTCCTTTCBCCCEEEETTEEEEEECTTCCEEEEEETTTTEEEEEEECSS-CB-------CCCE
T ss_pred EEEEECCCCeEEEEEEcCCccccCCCcceEEEECCEEEEEcCCCCCEEEEEECCCCeEEEEEEcCC-Cc-------cceE
Confidence 555655443322 1222210 0123456678999999874 67899999986543 2232211 11 1112
Q ss_pred EEeCCcEEEEEEeCCCc------eEEEEEEEcCCCCEEE
Q 041774 256 SEHEGSLLSVYYDSHRL------QWLVFRFDLIKENWVE 288 (382)
Q Consensus 256 Ve~~G~LllV~~~~~~~------~~~V~~ld~~~~~W~~ 288 (382)
+..+|+|+++....... .-.|+++|.++.+.++
T Consensus 179 ~~~dG~l~v~~~~~~~~~~~~~~~~~v~~id~~t~~v~~ 217 (328)
T 3dsm_A 179 MDKYNKMWTITDGGYEGSPYGYEAPSLYRIDAETFTVEK 217 (328)
T ss_dssp ECTTSEEEEEBCCBCTTCSSCBCCCEEEEEETTTTEEEE
T ss_pred EcCCCCEEEEECCCccCCccccCCceEEEEECCCCeEEE
Confidence 23457766665432100 2467777776665543
No 54
>3azo_A Aminopeptidase; POP family, hydrolase; 2.00A {Streptomyces morookaensis} PDB: 3azp_A 3azq_A
Probab=21.67 E-value=5.5e+02 Score=24.73 Aligned_cols=145 Identities=10% Similarity=0.005 Sum_probs=74.0
Q ss_pred ceEEEEcCC-CC---ceeeCCCCcccCcceEEEcCCCCCCCeEEEEEEEeeCCCeEEEEEEecCCCceEEeecCCc----
Q 041774 130 SSLFFYNPF-SA---SIIELPPLHMFSSDKATFSTAPTSLFCTVFVLSVYYSTRRICISTCKPGERTWTRHFFDGF---- 201 (382)
Q Consensus 130 ~~~~l~NP~-T~---~~i~LP~~~~~~~~~v~~s~~p~s~~~~v~~i~~~~~~~~~~i~~~r~gd~~W~~~~~~~~---- 201 (382)
..++++|.- ++ +...|..-.......+.++ |.+. ++.+.. ..+ ..+|..+...+..++.+.....
T Consensus 217 ~~i~~~d~~~~g~~~~~~~l~~~~~~~~~~~~~s--pdg~---l~~~~~-~~~-~~~l~~~~~~~~~~~~l~~~~~~~~~ 289 (662)
T 3azo_A 217 TELKTARVTEDGRFADTRTLLGGPEEAIAQAEWA--PDGS---LIVATD-RTG-WWNLHRVDPATGAATQLCRREEEFAG 289 (662)
T ss_dssp EEEEEEEECTTSCEEEEEEEEEETTBCEEEEEEC--TTSC---EEEEEC-TTS-SCEEEEECTTTCCEEESSCCSSBSSC
T ss_pred cEEEEEEECCCCcccccEEeCCCCCceEcceEEC--CCCe---EEEEEC-CCC-CeEEEEEECCCCceeecccccccccC
Confidence 578899987 56 4444432111111234454 3222 333333 222 3467777766667776532111
Q ss_pred c---cccceEEEE-CCEEEEEeeCC--eEEEEEcCCCCeEEeccCCCCCCcceeeceeEE-EEeCCcEEEEEEeCCCceE
Q 041774 202 Y---GDLHGLTYL-RGVLYCSFCNN--VLGAFRVSTNSWKIYPHNRIRPTSVYLYYGLIE-SEHEGSLLSVYYDSHRLQW 274 (382)
Q Consensus 202 ~---~~~~d~v~~-~G~~Y~l~~~g--~l~~~d~~~~~~~~~~~p~~~~~~~~~~~~~~L-Ve~~G~LllV~~~~~~~~~ 274 (382)
+ .....+++. +|++++....| .|+.+|+.+...+.+..+ .. ...-+ .-.++.++++...... ..
T Consensus 290 p~w~~~~~~~~~~~~~~~~~~~~~~~~~l~~~d~~~~~~~~l~~~----~~----~~~~~~s~~~~~~~~~~~~~~~-~~ 360 (662)
T 3azo_A 290 PLWTPGMRWFAPLANGLIAVVHGKGAAVLGILDPESGELVDAAGP----WT----EWAATLTVSGTRAVGVAASPRT-AY 360 (662)
T ss_dssp CCCSTTCCSEEECTTSCEEEEEBSSSCEEEEEETTTTEEEECCSS----CC----EEEEEEEEETTEEEEEEEETTE-EE
T ss_pred ccccccCceEeEeCCCEEEEEEEcCccEEEEEECCCCcEEEecCC----CC----eEEEEEecCCCEEEEEEcCCCC-CC
Confidence 0 113456665 78877765324 567778876555555322 11 11112 2245556655544333 67
Q ss_pred EEEEEEcCCCCEEEcc
Q 041774 275 LVFRFDLIKENWVEVN 290 (382)
Q Consensus 275 ~V~~ld~~~~~W~~v~ 290 (382)
.||.+|..+++..++.
T Consensus 361 ~i~~~d~~~g~~~~l~ 376 (662)
T 3azo_A 361 EVVELDTVTGRARTIG 376 (662)
T ss_dssp EEEEEETTTCCEEEEE
T ss_pred EEEEEECCCCceEEee
Confidence 8899987777666653
No 55
>3mbr_X Glutamine cyclotransferase; beta-propeller; 1.44A {Xanthomonas campestris}
Probab=20.28 E-value=2.6e+02 Score=24.04 Aligned_cols=76 Identities=22% Similarity=0.156 Sum_probs=39.2
Q ss_pred EEECCEEEEEeeCCeEEEEEcCCCC-eEEeccCCCCCCcceeeceeEEEE-eCCcEEEEEEeCCCceEEEEEEEcCCCC-
Q 041774 209 TYLRGVLYCSFCNNVLGAFRVSTNS-WKIYPHNRIRPTSVYLYYGLIESE-HEGSLLSVYYDSHRLQWLVFRFDLIKEN- 285 (382)
Q Consensus 209 v~~~G~~Y~l~~~g~l~~~d~~~~~-~~~~~~p~~~~~~~~~~~~~~LVe-~~G~LllV~~~~~~~~~~V~~ld~~~~~- 285 (382)
..-++++|+-+..+.|..+|+.... .+.+.. ....... ....-+| .+|+|+ +....+. .|.++|.++++
T Consensus 111 t~dg~~L~vSdgs~~l~~iDp~t~~~~~~I~V---~~~g~~~-~~lNeLe~~~G~ly-anvw~s~---~I~vIDp~tG~V 182 (243)
T 3mbr_X 111 TSDDSHLYMSDGTAVIRKLDPDTLQQVGSIKV---TAGGRPL-DNLNELEWVNGELL-ANVWLTS---RIARIDPASGKV 182 (243)
T ss_dssp EECSSCEEEECSSSEEEEECTTTCCEEEEEEC---EETTEEC-CCEEEEEEETTEEE-EEETTTT---EEEEECTTTCBE
T ss_pred eeCCCEEEEECCCCeEEEEeCCCCeEEEEEEE---ccCCccc-ccceeeEEeCCEEE-EEECCCC---eEEEEECCCCCE
Confidence 3345578877777889999887632 222322 1111000 1111233 478877 5554332 67778887654
Q ss_pred --EEEcccC
Q 041774 286 --WVEVNRL 292 (382)
Q Consensus 286 --W~~v~~L 292 (382)
|..+..|
T Consensus 183 ~~~idl~~l 191 (243)
T 3mbr_X 183 VAWIDLQAL 191 (243)
T ss_dssp EEEEECGGG
T ss_pred EEEEECCcC
Confidence 4444444
Done!