BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 041777
(149 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q9STZ2|SELT_ARATH SelT-like protein OS=Arabidopsis thaliana GN=At3g47300 PE=2 SV=2
Length = 209
Score = 167 bits (424), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 77/131 (58%), Positives = 101/131 (77%)
Query: 2 CFCRGHAMTTKHMLEEAFPGITVTLANHPRPLLKRLMGIVIPILQGGVIVIIMGGEQIFQ 61
C +G A++ K MLE FPG+ V LAN+P P KR++ V+P+ Q GVI +IMGGEQIF
Sbjct: 67 CSYKGTAVSMKKMLESVFPGLDVVLANYPAPAPKRILAKVVPVAQVGVIGLIMGGEQIFP 126
Query: 62 KLGYMKPPPWYYSLRANRHGTIITTWFLGNYIKSCLKNSGAFEVFCDGELVFSKLMEQRF 121
+G +PP WY+SLRANR G++ +TW LGN+++S L++SGAFEV C+GELVFSKL E RF
Sbjct: 127 MIGIAQPPAWYHSLRANRFGSMASTWLLGNFLQSFLQSSGAFEVSCNGELVFSKLKEGRF 186
Query: 122 PGEFELRELVS 132
PGE ELR+L+S
Sbjct: 187 PGEIELRDLIS 197
>sp|Q9BN19|HSP6_HETGL Putative esophageal gland cell secretory protein 6 OS=Heterodera
glycines GN=HSP6 PE=2 SV=1
Length = 244
Score = 63.9 bits (154), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 39/142 (27%), Positives = 71/142 (50%), Gaps = 1/142 (0%)
Query: 2 CFCRGHAMTTKHMLEEAFPGITVTLANHPRPLLKRLMGIVIPILQGGVIVIIMGGEQIFQ 61
C R +L E +PGI + N+P +L+ + VI +++ +IV ++ G F
Sbjct: 91 CGYRQAYEQFAQILREKYPGIDIHGENYPPGILRTVGAQVIGMVKIALIVCVVSGRSPFP 150
Query: 62 KLGYMKPPPWYYSLRANRHGTIITTWFLGNYIKSCLKNSGAFEVFCDGELVFSKLMEQRF 121
LG ++ P ++ + +NR + + N I+ L+++GAFE++ + E ++SKL R
Sbjct: 151 TLG-LETPTFFQWMLSNRLSAALMLFLFSNAIEGMLQSTGAFEIYIESERIWSKLESGRV 209
Query: 122 PGEFELRELVSRKLYNLRNSEG 143
P EL + + L R G
Sbjct: 210 PSPPELFQAIDSHLAIRRGGAG 231
>sp|Q9VMV6|SELT_DROME SelT-like protein OS=Drosophila melanogaster GN=CG3887 PE=2 SV=1
Length = 198
Score = 58.9 bits (141), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 38/122 (31%), Positives = 64/122 (52%), Gaps = 1/122 (0%)
Query: 14 MLEEAFPGITVTLANHPRPLLKRLMGIVIPILQGGVIVIIMGGEQIFQKLGYMKPPPWYY 73
+L E +P I V N+ P L + +I L+ +IV ++ F LG + P W+
Sbjct: 64 LLGEKYPQIQVNGGNYDPPGLNYYLSKMIFALKIIIIVSVVSAVSPFTFLG-LNTPSWWS 122
Query: 74 SLRANRHGTIITTWFLGNYIKSCLKNSGAFEVFCDGELVFSKLMEQRFPGEFELRELVSR 133
++AN+ + +FLGN +++ L +SGAFE+ + V+SKL RFP L +++
Sbjct: 123 HMQANKIYACMMIFFLGNMLEAQLISSGAFEITLNDVPVWSKLQTGRFPSPEVLFQIIDN 182
Query: 134 KL 135
L
Sbjct: 183 HL 184
>sp|Q19892|SELT2_CAEEL Putative selT-like protein F28H7.4 OS=Caenorhabditis elegans
GN=F28H7.4 PE=3 SV=2
Length = 216
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 34/141 (24%), Positives = 67/141 (47%), Gaps = 4/141 (2%)
Query: 2 CFCRGHAMTTKHMLE---EAFPGITVTLANHPRPLLKRLMGIVIPILQGGVIVIIMGGEQ 58
C G+ E E +PG+ + N K + ++ + + G+I I++ G
Sbjct: 77 CVSCGYKQAFNQFYEFAKEKYPGLVIEGGNFSPDFWKGCLAQIVGVAKIGLIAIVITGSN 136
Query: 59 IFQKLGYMKPPPWYYSLRANRHGTIITTWFLGNYIKSCLKNSGAFEVFCDGELVFSKLME 118
F+ +G+ P + NR + + +GN +S L ++GAFE+F + ++SK+ +
Sbjct: 137 PFEYIGFGYPQ-ILQTAHYNRFSYSLLVFMIGNLFESTLSSTGAFEIFLGDKQIWSKISK 195
Query: 119 QRFPGEFELRELVSRKLYNLR 139
+R P + E L+ +L +R
Sbjct: 196 ERVPTQEEFLNLIDLQLKTIR 216
>sp|Q9U3N5|SELT1_CAEEL Putative selT-like protein C35C5.3 OS=Caenorhabditis elegans
GN=C35C5.3 PE=3 SV=2
Length = 247
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 35/133 (26%), Positives = 67/133 (50%), Gaps = 5/133 (3%)
Query: 16 EEAFPGITVTLANHPRPLLKRLMGIVIPILQGGVIVIIMGGEQIFQKLGYMKPPPWYYSL 75
+E +P + + AN L K + + ++ V+V+++GG F++ G P ++
Sbjct: 109 KEKYPNMPIEGANFAPVLWKAYVAQALSFVKMAVLVLVLGGINPFERFGLGYPQILQHA- 167
Query: 76 RANRHGTIITTWFLGNYIKSCLKNSGAFEVFCDGELVFSKLMEQRFPGEFELRELVSRKL 135
N+ + + + LGN ++ L ++GAFEV+ E ++SK+ R P E +L+ +L
Sbjct: 168 HGNKMSSCMLVFMLGNLVEQSLISTGAFEVYLGNEQIWSKIESGRVPSPQEFMQLIDAQL 227
Query: 136 YNL----RNSEGF 144
L N+E F
Sbjct: 228 AVLGKAPVNTESF 240
>sp|Q502K9|SELT2_DANRE Selenoprotein T2 OS=Danio rerio GN=selt2 PE=2 SV=3
Length = 210
Score = 45.4 bits (106), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 29/137 (21%), Positives = 64/137 (46%), Gaps = 4/137 (2%)
Query: 2 CFCRGHAMTTKHM---LEEAFPGITVTLANHPRPLLKRLMGIVIPILQGGVIVIIMGGEQ 58
C G++ + + + +P I + N+P + + +G + + I +I+ G+
Sbjct: 62 CISUGYSKVFQEYSRSISQLYPDIRIEGDNYPPKPINKYLGNFLSYFKLLAIALIVTGQN 121
Query: 59 IFQKLGYMKPPPWYYSLRANRHGTIITTWFLGNYIKSCLKNSGAFEVFCDGELVFSKLME 118
FQ G P W + + N+ + + +F+ N +++ ++GAFE+ + ++SKL
Sbjct: 122 PFQMFGMNTPRIWAWG-QENKIFSCLMAFFISNMLETHFLSTGAFEITLNDIPIWSKLQS 180
Query: 119 QRFPGEFELRELVSRKL 135
P EL +++ L
Sbjct: 181 GYVPNIQELFQILDNHL 197
>sp|Q6PBD1|SELT_XENTR Selenoprotein T OS=Xenopus tropicalis GN=selt PE=2 SV=3
Length = 201
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 26/123 (21%), Positives = 61/123 (49%), Gaps = 3/123 (2%)
Query: 14 MLEEAFPGITVTLANH-PRPLLKRLMGIVIPILQGGVIVIIMGGEQIFQKLGYMKPPPWY 72
++ + +P I + N+ P P+ + + + + + +I +I+ G+ F G P W
Sbjct: 66 VISQRYPDIRIEGENYLPHPIYRNIASF-LSVFKLVLIGLIIAGKDPFAFFGMQAPSVWQ 124
Query: 73 YSLRANRHGTIITTWFLGNYIKSCLKNSGAFEVFCDGELVFSKLMEQRFPGEFELRELVS 132
+ + N+ + +F+ N I++ ++GAFE+ + V+SKL P +L +++
Sbjct: 125 WG-QENKVYACMMVFFVSNMIENQCMSTGAFEITLNDVPVWSKLESGHLPSVQQLVQIID 183
Query: 133 RKL 135
++
Sbjct: 184 NEM 186
>sp|Q6PHY8|SELTB_DANRE Selenoprotein T1b OS=Danio rerio GN=selt1b PE=2 SV=3
Length = 193
Score = 40.8 bits (94), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 31/123 (25%), Positives = 61/123 (49%), Gaps = 3/123 (2%)
Query: 14 MLEEAFPGITVTLANH-PRPLLKRLMGIVIPILQGGVIVIIMGGEQIFQKLGYMKPPPWY 72
+L + +P I + N P+PL + + + + + VI +I+ G+ F L P W
Sbjct: 59 VLTQRYPDIRIEGENFLPQPLYRHIASF-LSVFKLVVIGLIILGKNPFTYLHIETPGIWL 117
Query: 73 YSLRANRHGTIITTWFLGNYIKSCLKNSGAFEVFCDGELVFSKLMEQRFPGEFELRELVS 132
++ + N+ +FL N I++ ++GAFEV + V+SKL P +L +++
Sbjct: 118 WA-QENKIYACTMVFFLSNMIENQCMSTGAFEVTLNDVPVWSKLQSGHLPSMQQLVQILE 176
Query: 133 RKL 135
++
Sbjct: 177 NEM 179
>sp|A6QP01|SELT_BOVIN Selenoprotein T OS=Bos taurus GN=SELT PE=2 SV=2
Length = 195
Score = 40.8 bits (94), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 27/123 (21%), Positives = 62/123 (50%), Gaps = 3/123 (2%)
Query: 14 MLEEAFPGITVTLANH-PRPLLKRLMGIVIPILQGGVIVIIMGGEQIFQKLGYMKPPPWY 72
++ + +P I + N+ P+P+ + + + + + +I +I+ G+ F G P W
Sbjct: 61 VISQRYPDIRIEGENYLPQPIYRHIASF-LSVFKLVLIGLIIVGKDPFAFFGMQAPSIWQ 119
Query: 73 YSLRANRHGTIITTWFLGNYIKSCLKNSGAFEVFCDGELVFSKLMEQRFPGEFELRELVS 132
+ + N+ + +FL N I++ ++GAFE+ + V+SKL P +L +++
Sbjct: 120 WG-QENKVYACMMVFFLSNMIENQCMSTGAFEITLNDVPVWSKLESGHLPSMQQLVQILD 178
Query: 133 RKL 135
++
Sbjct: 179 NEM 181
>sp|Q1H5H1|SELT_RAT Selenoprotein T OS=Rattus norvegicus GN=Selt PE=2 SV=2
Length = 195
Score = 40.8 bits (94), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 27/123 (21%), Positives = 62/123 (50%), Gaps = 3/123 (2%)
Query: 14 MLEEAFPGITVTLANH-PRPLLKRLMGIVIPILQGGVIVIIMGGEQIFQKLGYMKPPPWY 72
++ + +P I + N+ P+P+ + + + + + +I +I+ G+ F G P W
Sbjct: 61 VISQRYPDIRIEGENYLPQPIYRHIASF-LSVFKLVLIGLIIVGKDPFAFFGMQAPSIWQ 119
Query: 73 YSLRANRHGTIITTWFLGNYIKSCLKNSGAFEVFCDGELVFSKLMEQRFPGEFELRELVS 132
+ + N+ + +FL N I++ ++GAFE+ + V+SKL P +L +++
Sbjct: 120 WG-QENKVYACMMVFFLSNMIENQCMSTGAFEITLNDVPVWSKLESGHLPSMQQLVQILD 178
Query: 133 RKL 135
++
Sbjct: 179 NEM 181
>sp|P62342|SELT_MOUSE Selenoprotein T OS=Mus musculus GN=Selt PE=2 SV=2
Length = 195
Score = 40.8 bits (94), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 27/123 (21%), Positives = 62/123 (50%), Gaps = 3/123 (2%)
Query: 14 MLEEAFPGITVTLANH-PRPLLKRLMGIVIPILQGGVIVIIMGGEQIFQKLGYMKPPPWY 72
++ + +P I + N+ P+P+ + + + + + +I +I+ G+ F G P W
Sbjct: 61 VISQRYPDIRIEGENYLPQPIYRHIASF-LSVFKLVLIGLIIVGKDPFAFFGMQAPSIWQ 119
Query: 73 YSLRANRHGTIITTWFLGNYIKSCLKNSGAFEVFCDGELVFSKLMEQRFPGEFELRELVS 132
+ + N+ + +FL N I++ ++GAFE+ + V+SKL P +L +++
Sbjct: 120 WG-QENKVYACMMVFFLSNMIENQCMSTGAFEITLNDVPVWSKLESGHLPSMQQLVQILD 178
Query: 133 RKL 135
++
Sbjct: 179 NEM 181
>sp|Q5ZJN8|SELT_CHICK Selenoprotein T OS=Gallus gallus GN=SELT PE=2 SV=3
Length = 199
Score = 40.8 bits (94), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 27/123 (21%), Positives = 62/123 (50%), Gaps = 3/123 (2%)
Query: 14 MLEEAFPGITVTLANH-PRPLLKRLMGIVIPILQGGVIVIIMGGEQIFQKLGYMKPPPWY 72
++ + +P I + N+ P+P+ + + + + + +I +I+ G+ F G P W
Sbjct: 65 VISQRYPDIRIEGENYLPQPIYRHIASF-LSVFKLVLIGLIIVGKDPFAFFGMQAPSIWQ 123
Query: 73 YSLRANRHGTIITTWFLGNYIKSCLKNSGAFEVFCDGELVFSKLMEQRFPGEFELRELVS 132
+ + N+ + +FL N I++ ++GAFE+ + V+SKL P +L +++
Sbjct: 124 WG-QENKVYACMMVFFLSNMIENQCMSTGAFEITLNDVPVWSKLESGHLPSMQQLVQILD 182
Query: 133 RKL 135
++
Sbjct: 183 NEM 185
>sp|P62341|SELT_HUMAN Selenoprotein T OS=Homo sapiens GN=SELT PE=2 SV=2
Length = 195
Score = 40.4 bits (93), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 27/123 (21%), Positives = 62/123 (50%), Gaps = 3/123 (2%)
Query: 14 MLEEAFPGITVTLANH-PRPLLKRLMGIVIPILQGGVIVIIMGGEQIFQKLGYMKPPPWY 72
++ + +P I + N+ P+P+ + + + + + +I +I+ G+ F G P W
Sbjct: 61 VISQRYPDIRIEGENYLPQPIYRHIASF-LSVFKLVLIGLIIVGKDPFAFFGMQAPSIWQ 119
Query: 73 YSLRANRHGTIITTWFLGNYIKSCLKNSGAFEVFCDGELVFSKLMEQRFPGEFELRELVS 132
+ + N+ + +FL N I++ ++GAFE+ + V+SKL P +L +++
Sbjct: 120 WG-QENKVYACMMVFFLSNMIENQCMSTGAFEITLNDVPVWSKLESGHLPSMQQLVQILD 178
Query: 133 RKL 135
++
Sbjct: 179 NEM 181
>sp|Q802F2|SELTA_DANRE Selenoprotein T1a OS=Danio rerio GN=selt1a PE=2 SV=3
Length = 193
Score = 39.3 bits (90), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 31/124 (25%), Positives = 60/124 (48%), Gaps = 7/124 (5%)
Query: 15 LEEAFPGITVTLANH-PRPLLKRLMGIV--IPILQGGVIVIIMGGEQIFQKLGYMKPPPW 71
L + +P I + N+ P PL + + + +L GVI++ G+ F G P W
Sbjct: 60 LYQRYPDIRIEGENYLPLPLYRHIASFLSMFKLLLIGVIIL---GKDPFALCGMQAPGIW 116
Query: 72 YYSLRANRHGTIITTWFLGNYIKSCLKNSGAFEVFCDGELVFSKLMEQRFPGEFELRELV 131
+S + N+ + +F N I++ ++GAFE+ + V+SKL P +L +++
Sbjct: 117 VWS-QENKIYACMMVFFFSNMIENQCMSTGAFEITLNDVPVWSKLESGHLPSMQQLVQIL 175
Query: 132 SRKL 135
++
Sbjct: 176 ENEM 179
>sp|Q148C8|MIEN1_BOVIN Migration and invasion enhancer 1 OS=Bos taurus GN=MIEN1 PE=3 SV=1
Length = 115
Score = 38.5 bits (88), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 21/52 (40%), Positives = 31/52 (59%)
Query: 82 TIITTWFLGNYIKSCLKNSGAFEVFCDGELVFSKLMEQRFPGEFELRELVSR 133
+ + + G I+S L +GAFE+ +G+LVFSKL FP E +L E + R
Sbjct: 44 SAVKEQYPGIEIESRLGGTGAFEIEINGQLVFSKLENGGFPYEKDLIEAIRR 95
>sp|Q9CQ86|MIEN1_MOUSE Migration and invasion enhancer 1 OS=Mus musculus GN=Mien1 PE=1
SV=1
Length = 115
Score = 38.1 bits (87), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 21/52 (40%), Positives = 31/52 (59%)
Query: 82 TIITTWFLGNYIKSCLKNSGAFEVFCDGELVFSKLMEQRFPGEFELRELVSR 133
+ + + G I+S L +GAFE+ +G+LVFSKL FP E +L E + R
Sbjct: 44 SAVKEEYPGIEIESRLGGTGAFEIEINGQLVFSKLENGGFPYEKDLMEAIRR 95
>sp|Q9BRT3|MIEN1_HUMAN Migration and invasion enhancer 1 OS=Homo sapiens GN=MIEN1 PE=1
SV=1
Length = 115
Score = 38.1 bits (87), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 21/53 (39%), Positives = 31/53 (58%)
Query: 81 GTIITTWFLGNYIKSCLKNSGAFEVFCDGELVFSKLMEQRFPGEFELRELVSR 133
+ + + G I+S L +GAFE+ +G+LVFSKL FP E +L E + R
Sbjct: 43 ASAVKEQYPGIEIESRLGGTGAFEIEINGQLVFSKLENGGFPYEKDLIEAIRR 95
>sp|Q5I047|F173B_XENLA Protein FAM173B OS=Xenopus laevis GN=fam173b PE=2 SV=1
Length = 226
Score = 32.7 bits (73), Expect = 0.76, Method: Compositional matrix adjust.
Identities = 21/64 (32%), Positives = 31/64 (48%), Gaps = 3/64 (4%)
Query: 20 PGITVTLANHPRPLLKRLMGIVIPILQGGVIVIIMGGEQIFQKLGYMKPP--PWYYSLRA 77
P T + N + +L+ GIV+ I G ++I ++ FQ +GY P WY RA
Sbjct: 64 PATTTQVKNVLK-MLRSRTGIVVDIGSGDGRIVIAAAKEGFQAVGYELNPWLVWYSRFRA 122
Query: 78 NRHG 81
R G
Sbjct: 123 WREG 126
>sp|Q7VRX4|SYM_BLOFL Methionine--tRNA ligase OS=Blochmannia floridanus GN=metG PE=3 SV=1
Length = 545
Score = 32.7 bits (73), Expect = 0.79, Method: Composition-based stats.
Identities = 15/44 (34%), Positives = 26/44 (59%), Gaps = 1/44 (2%)
Query: 77 ANRHGTIITTWFLGNYIKSCLKNSGAFEVFCDGELVFSKLMEQR 120
A+R+ IT + G Y+ + L+NS ++ F D + + KL +QR
Sbjct: 391 ASRNSNFITQYNYG-YLSNSLENSNLYDFFIDAQYLIGKLFQQR 433
>sp|A7MIC1|RAPA_CROS8 RNA polymerase-associated protein RapA OS=Cronobacter sakazakii
(strain ATCC BAA-894) GN=rapA PE=3 SV=1
Length = 968
Score = 29.6 bits (65), Expect = 6.2, Method: Composition-based stats.
Identities = 13/39 (33%), Positives = 23/39 (58%)
Query: 88 FLGNYIKSCLKNSGAFEVFCDGELVFSKLMEQRFPGEFE 126
++G + + +N EVF D +LVFSK ++ F G+ +
Sbjct: 83 YIGTRLDTLEENVALREVFLDSKLVFSKPQDRLFAGQID 121
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.327 0.144 0.464
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 59,290,808
Number of Sequences: 539616
Number of extensions: 2382256
Number of successful extensions: 6193
Number of sequences better than 100.0: 24
Number of HSP's better than 100.0 without gapping: 17
Number of HSP's successfully gapped in prelim test: 7
Number of HSP's that attempted gapping in prelim test: 6171
Number of HSP's gapped (non-prelim): 24
length of query: 149
length of database: 191,569,459
effective HSP length: 107
effective length of query: 42
effective length of database: 133,830,547
effective search space: 5620882974
effective search space used: 5620882974
T: 11
A: 40
X1: 15 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.6 bits)
S2: 55 (25.8 bits)