BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 041778
(72 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q9LYS6|CALS6_ARATH Putative callose synthase 6 OS=Arabidopsis thaliana GN=CALS6 PE=3
SV=2
Length = 1921
Score = 89.0 bits (219), Expect = 7e-18, Method: Composition-based stats.
Identities = 48/72 (66%), Positives = 57/72 (79%), Gaps = 5/72 (6%)
Query: 2 ASSSGTKKTRAPTPRRQSK-AMSQAQKMFVDVQDEDSSAIDSELVPSSLAAIAPVLRVAN 60
ASSSGT A PR S+ A S+A M +D +ED+SA+DSELVPSSLA+IAP+LRVAN
Sbjct: 3 ASSSGT----AELPRSLSRRAPSRATTMMIDRPNEDASAMDSELVPSSLASIAPILRVAN 58
Query: 61 QIEKDNPRVAYL 72
+IEKDNPRVAYL
Sbjct: 59 EIEKDNPRVAYL 70
>sp|Q9SHJ3|CALS7_ARATH Callose synthase 7 OS=Arabidopsis thaliana GN=CALS7 PE=2 SV=3
Length = 1958
Score = 75.1 bits (183), Expect = 1e-13, Method: Composition-based stats.
Identities = 38/76 (50%), Positives = 52/76 (68%), Gaps = 5/76 (6%)
Query: 2 ASSSGTKKTRAPTPRRQ-----SKAMSQAQKMFVDVQDEDSSAIDSELVPSSLAAIAPVL 56
++SSG + P+ Q S+ M++A M ++ +ED IDSELVPSSLA+IAP+L
Sbjct: 3 STSSGGRGEDGRPPQMQPVRSMSRKMTRAGTMMIEHPNEDERPIDSELVPSSLASIAPIL 62
Query: 57 RVANQIEKDNPRVAYL 72
RVAN I++DN RVAYL
Sbjct: 63 RVANDIDQDNARVAYL 78
>sp|Q9AUE0|CALS1_ARATH Callose synthase 1 OS=Arabidopsis thaliana GN=CALS1 PE=1 SV=2
Length = 1950
Score = 57.4 bits (137), Expect = 2e-08, Method: Composition-based stats.
Identities = 29/64 (45%), Positives = 39/64 (60%), Gaps = 4/64 (6%)
Query: 9 KTRAPTPRRQSKAMSQAQKMFVDVQDEDSSAIDSELVPSSLAAIAPVLRVANQIEKDNPR 68
+ R P P + + + Q V + +DSE+VPSSL IAP+LRVAN++E NPR
Sbjct: 3 QRREPDPPPPQRRILRTQT----VGSLGEAMLDSEVVPSSLVEIAPILRVANEVEASNPR 58
Query: 69 VAYL 72
VAYL
Sbjct: 59 VAYL 62
>sp|Q9SL03|CALS2_ARATH Callose synthase 2 OS=Arabidopsis thaliana GN=CALS2 PE=2 SV=3
Length = 1950
Score = 56.6 bits (135), Expect = 4e-08, Method: Composition-based stats.
Identities = 24/35 (68%), Positives = 30/35 (85%)
Query: 38 SAIDSELVPSSLAAIAPVLRVANQIEKDNPRVAYL 72
+ +DSE+VPSSL IAP+LRVAN++E NPRVAYL
Sbjct: 28 AMLDSEVVPSSLVEIAPILRVANEVEASNPRVAYL 62
>sp|Q9LXT9|CALS3_ARATH Callose synthase 3 OS=Arabidopsis thaliana GN=CALS3 PE=2 SV=3
Length = 1955
Score = 56.2 bits (134), Expect = 6e-08, Method: Composition-based stats.
Identities = 24/34 (70%), Positives = 29/34 (85%)
Query: 39 AIDSELVPSSLAAIAPVLRVANQIEKDNPRVAYL 72
+ DSE+VPSSL IAP+LRVAN++E NPRVAYL
Sbjct: 32 SFDSEVVPSSLVEIAPILRVANEVESSNPRVAYL 65
>sp|Q3B724|CALS5_ARATH Callose synthase 5 OS=Arabidopsis thaliana GN=CALS5 PE=1 SV=1
Length = 1923
Score = 50.4 bits (119), Expect = 3e-06, Method: Composition-based stats.
Identities = 30/72 (41%), Positives = 40/72 (55%), Gaps = 8/72 (11%)
Query: 1 MASSSGTKKTRAPTPRRQSKAMSQAQKMFVDVQDEDSSAIDSELVPSSLAAIAPVLRVAN 60
MA SS T P + + S A + ++V D E+VP+SL IAP+LRVA
Sbjct: 1 MAQSS-TSHDSGPQGLMRRPSRSAATTVSIEV-------FDHEVVPASLGTIAPILRVAA 52
Query: 61 QIEKDNPRVAYL 72
+IE + PRVAYL
Sbjct: 53 EIEHERPRVAYL 64
>sp|Q9LTG5|CALS4_ARATH Callose synthase 4 OS=Arabidopsis thaliana GN=CALS4 PE=2 SV=2
Length = 1871
Score = 40.8 bits (94), Expect = 0.003, Method: Composition-based stats.
Identities = 20/33 (60%), Positives = 23/33 (69%), Gaps = 1/33 (3%)
Query: 41 DSELVPSSLAA-IAPVLRVANQIEKDNPRVAYL 72
DSELVPSSL I P+LRVA +E NPR +L
Sbjct: 24 DSELVPSSLHEDITPILRVAKDVEDTNPRSLFL 56
>sp|Q9LUD7|CALS8_ARATH Putative callose synthase 8 OS=Arabidopsis thaliana GN=CALS8 PE=2
SV=2
Length = 1976
Score = 38.9 bits (89), Expect = 0.009, Method: Composition-based stats.
Identities = 18/37 (48%), Positives = 26/37 (70%), Gaps = 1/37 (2%)
Query: 37 SSAIDSELVPSSLAA-IAPVLRVANQIEKDNPRVAYL 72
S DSE +P++LA+ I LR+AN +E + PR+AYL
Sbjct: 48 SEPFDSERLPATLASEIQRFLRIANLVESEEPRIAYL 84
>sp|O13703|VTA1_SCHPO Vacuolar protein sorting-associated protein vts1
OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843)
GN=vts1 PE=3 SV=2
Length = 389
Score = 30.0 bits (66), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 12/33 (36%), Positives = 19/33 (57%)
Query: 40 IDSELVPSSLAAIAPVLRVANQIEKDNPRVAYL 72
I + +P L +I P +R N++E NP +AY
Sbjct: 2 IQIDTIPKELQSIQPFVRRFNELEAHNPVIAYW 34
>sp|B9MIT4|HSCA_ACIET Chaperone protein HscA homolog OS=Acidovorax ebreus (strain TPSY)
GN=hscA PE=3 SV=1
Length = 622
Score = 30.0 bits (66), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 19/42 (45%), Positives = 26/42 (61%), Gaps = 1/42 (2%)
Query: 31 DVQDEDSSAIDSELVPSSLAAIAPVLRVANQIEKDNPRVAYL 72
DV+ ED +A+ +EL SLAA+ LR A QIE+D + L
Sbjct: 299 DVKREDFAAVTAELTQRSLAAVRRTLRDA-QIERDEVKGVVL 339
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.309 0.120 0.308
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 21,588,256
Number of Sequences: 539616
Number of extensions: 608328
Number of successful extensions: 1750
Number of sequences better than 100.0: 13
Number of HSP's better than 100.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 5
Number of HSP's that attempted gapping in prelim test: 1741
Number of HSP's gapped (non-prelim): 13
length of query: 72
length of database: 191,569,459
effective HSP length: 44
effective length of query: 28
effective length of database: 167,826,355
effective search space: 4699137940
effective search space used: 4699137940
T: 11
A: 40
X1: 16 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.8 bits)
S2: 55 (25.8 bits)