BLASTP 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.


Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 041780
         (422 letters)

Database: swissprot 
           539,616 sequences; 191,569,459 total letters

Searching..................................................done



>sp|Q6A7E7|TIG_PROAC Trigger factor OS=Propionibacterium acnes (strain KPA171202 / DSM
           16379) GN=tig PE=3 SV=1
          Length = 530

 Score = 34.7 bits (78), Expect = 1.3,   Method: Compositional matrix adjust.
 Identities = 20/81 (24%), Positives = 42/81 (51%), Gaps = 2/81 (2%)

Query: 41  LNRPAVKSIKSEDGDIID-CVDIYKQPALDHPALKNHTIQLSPSFDIPAEKVDRRNESSR 99
           L +P ++  K EDG++++   ++  +P  D P +   ++++ P+ ++P E VD R E+ R
Sbjct: 88  LGQPEIEVTKLEDGEVVEFTAEVDVRPDFDLPDVSAISVEV-PAVEVPDEDVDERVETLR 146

Query: 100 LPVTIQTWQKSGSCPNGTVPI 120
                 T  +  +  +  V I
Sbjct: 147 QRFATNTEVERAAAKDDLVTI 167


>sp|Q90686|CATK_CHICK Cathepsin K OS=Gallus gallus GN=CTSK PE=2 SV=1
          Length = 334

 Score = 33.5 bits (75), Expect = 3.1,   Method: Compositional matrix adjust.
 Identities = 25/94 (26%), Positives = 46/94 (48%), Gaps = 14/94 (14%)

Query: 32  PEIDRKLKLLNRPAVKSIKSEDGDIIDCVDIYKQPALDH-----PALKNHTIQLSPSF-- 84
           PE+D +  L  R   K+++ + G  +  VD+ ++P +         L  H+ QL+ ++  
Sbjct: 25  PELDAQWDLWKRTIQKAVQRQGGRNVPEVDLGEEPEVHRCPQRGARLGKHSFQLAMNYLG 84

Query: 85  DIPAEKVDRRNESSRLPVTIQTWQKSGSCPNGTV 118
           D+ +E+V R     R+P       +S   PNGT+
Sbjct: 85  DMTSEEVVRTMTGLRVP-------RSRPRPNGTL 111


>sp|P0C593|DUPD1_MONDO Dual specificity phosphatase DUPD1 OS=Monodelphis domestica
           GN=DUPD1 PE=3 SV=1
          Length = 212

 Score = 32.7 bits (73), Expect = 5.7,   Method: Compositional matrix adjust.
 Identities = 28/93 (30%), Positives = 41/93 (44%), Gaps = 22/93 (23%)

Query: 202 SPDDYTTAQIWLKGGPGDNFESVEGGWVVNPKLY-GDKLTRLFVYWTKDSYKSTGCFDAI 260
           +P  +   +++ KG P   +  V   W   PKLY GD+ T L  Y  + S          
Sbjct: 27  TPGPFELERLFWKGSP--QYTHVNEVW---PKLYIGDEATALDRYSLEKS---------- 71

Query: 261 CSGFVQTGQVALGAAIGPWSISEGPQYYLPVGI 293
             GF       L AA G W+++ GP+YY  + I
Sbjct: 72  --GFTHV----LNAAHGRWNVNTGPEYYRDMAI 98


>sp|P0C592|DUPD1_HORSE Dual specificity phosphatase DUPD1 OS=Equus caballus GN=DUPD1 PE=3
           SV=2
          Length = 220

 Score = 32.0 bits (71), Expect = 9.6,   Method: Compositional matrix adjust.
 Identities = 27/93 (29%), Positives = 40/93 (43%), Gaps = 22/93 (23%)

Query: 202 SPDDYTTAQIWLKGGPGDNFESVEGGWVVNPKLY-GDKLTRLFVYWTKDSYKSTGCFDAI 260
           +P  +   +++ KG P   +  V   W   PKLY GD+ T L  Y  + +          
Sbjct: 34  APGAFELERLFWKGSP--QYTHVNEVW---PKLYIGDEATALDRYGLQKA---------- 78

Query: 261 CSGFVQTGQVALGAAIGPWSISEGPQYYLPVGI 293
             GF       L AA G W++  GP+YY  + I
Sbjct: 79  --GFTHV----LNAAHGRWNVDTGPEYYRDMAI 105


  Database: swissprot
    Posted date:  Mar 23, 2013  2:32 AM
  Number of letters in database: 191,569,459
  Number of sequences in database:  539,616
  
Lambda     K      H
   0.318    0.137    0.434 

Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 172,376,998
Number of Sequences: 539616
Number of extensions: 7752241
Number of successful extensions: 15271
Number of sequences better than 100.0: 5
Number of HSP's better than 100.0 without gapping: 0
Number of HSP's successfully gapped in prelim test: 5
Number of HSP's that attempted gapping in prelim test: 15271
Number of HSP's gapped (non-prelim): 5
length of query: 422
length of database: 191,569,459
effective HSP length: 120
effective length of query: 302
effective length of database: 126,815,539
effective search space: 38298292778
effective search space used: 38298292778
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 63 (28.9 bits)