Query 041785
Match_columns 181
No_of_seqs 147 out of 2049
Neff 10.7
Searched_HMMs 29240
Date Mon Mar 25 18:15:06 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/041785.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/041785hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 4gpm_A Engineered protein OR26 100.0 2.9E-32 9.9E-37 184.0 13.5 133 21-177 33-165 (169)
2 4gpm_A Engineered protein OR26 100.0 5E-31 1.7E-35 177.9 14.7 130 27-180 6-135 (169)
3 1d9s_A Cyclin-dependent kinase 100.0 1.9E-30 6.5E-35 169.1 11.3 129 20-173 7-136 (136)
4 1bi7_B P16INK4A, MTS1, multipl 100.0 2.7E-30 9.3E-35 172.1 9.6 135 20-179 7-142 (156)
5 4b93_B Ankyrin repeat domain-c 100.0 1.2E-29 4.1E-34 183.1 13.7 136 21-180 82-217 (269)
6 2rfm_A Putative ankyrin repeat 100.0 4.7E-29 1.6E-33 171.3 14.7 136 20-179 30-165 (192)
7 1n0r_A 4ANK, 4 ankyrin repeats 100.0 5.6E-29 1.9E-33 159.5 13.6 126 24-173 1-126 (126)
8 3v31_A Ankyrin repeat family A 100.0 6.1E-29 2.1E-33 167.1 14.3 131 25-179 3-133 (167)
9 2jab_A H10-2-G3; HER2, darpin, 100.0 4.4E-29 1.5E-33 162.6 11.6 126 22-171 11-136 (136)
10 2y1l_E Darpin-8.4; hydrolase-i 100.0 1.9E-28 6.6E-33 165.1 13.5 133 23-179 12-144 (169)
11 1ihb_A P18-INK4C(INK6), cyclin 100.0 1.3E-28 4.6E-33 164.6 11.7 128 22-173 35-162 (162)
12 1awc_B Protein (GA binding pro 100.0 2.8E-28 9.4E-33 161.8 12.7 129 26-179 3-131 (153)
13 3v30_A DNA-binding protein rfx 100.0 3.9E-28 1.3E-32 163.9 13.6 134 20-177 31-164 (172)
14 3v30_A DNA-binding protein rfx 100.0 1.2E-28 4.2E-33 166.4 10.9 131 25-179 2-133 (172)
15 3twr_A Tankyrase-2; ankyrin re 100.0 4.8E-28 1.6E-32 162.4 11.4 132 24-179 7-139 (165)
16 3hra_A Ankyrin repeat family p 100.0 2.2E-27 7.7E-32 163.8 14.8 135 22-179 36-176 (201)
17 2y1l_E Darpin-8.4; hydrolase-i 100.0 1.6E-27 5.4E-32 160.7 13.5 127 21-171 43-169 (169)
18 3f6q_A Integrin-linked protein 100.0 1.4E-27 4.8E-32 162.3 13.3 132 22-177 36-167 (179)
19 3f6q_A Integrin-linked protein 100.0 3.9E-28 1.3E-32 165.1 10.4 133 23-179 3-136 (179)
20 1ihb_A P18-INK4C(INK6), cyclin 100.0 8.2E-28 2.8E-32 160.7 11.4 131 24-179 4-135 (162)
21 2rfa_A Transient receptor pote 100.0 2.6E-27 8.8E-32 167.0 14.3 145 24-179 2-152 (232)
22 3aji_A 26S proteasome non-ATPa 100.0 2.6E-27 8.8E-32 166.8 14.3 154 20-179 35-203 (231)
23 3twr_A Tankyrase-2; ankyrin re 100.0 7.9E-28 2.7E-32 161.4 10.4 126 22-172 39-164 (165)
24 4hbd_A KN motif and ankyrin re 99.9 4.1E-27 1.4E-31 170.4 14.8 136 20-179 106-248 (276)
25 3v31_A Ankyrin repeat family A 99.9 1.6E-27 5.5E-32 160.1 11.8 130 21-174 32-161 (167)
26 2rfm_A Putative ankyrin repeat 99.9 2.7E-27 9.3E-32 162.5 13.0 126 22-171 65-190 (192)
27 1sw6_A Regulatory protein SWI6 99.9 3.8E-27 1.3E-31 174.4 14.4 155 21-180 127-315 (327)
28 1yyh_A HN1;, notch 1, ankyrin 99.9 3E-27 1E-31 169.0 13.4 152 22-179 54-221 (253)
29 2vge_A RELA-associated inhibit 99.9 2.2E-28 7.4E-33 172.7 7.3 134 22-179 18-154 (229)
30 1ikn_D Protein (I-kappa-B-alph 99.9 1.5E-27 5.1E-32 168.7 11.4 139 21-179 41-182 (236)
31 3aji_A 26S proteasome non-ATPa 99.9 5.9E-27 2E-31 164.9 14.4 150 24-179 5-170 (231)
32 1yyh_A HN1;, notch 1, ankyrin 99.9 2.9E-27 9.9E-32 169.0 12.9 144 30-179 28-188 (253)
33 2f8y_A Notch homolog 1, transl 99.9 7.5E-27 2.6E-31 163.6 14.7 153 22-179 22-189 (223)
34 1oy3_D Transcription factor in 99.9 3.3E-27 1.1E-31 170.6 13.2 157 21-179 41-256 (282)
35 2dzn_A Probable 26S proteasome 99.9 3.7E-27 1.3E-31 165.6 13.1 152 22-179 33-206 (228)
36 2pnn_A Transient receptor pote 99.9 2.2E-27 7.7E-32 171.2 11.9 139 22-177 98-263 (273)
37 1oy3_D Transcription factor in 99.9 3E-27 1E-31 170.8 12.5 116 21-160 154-270 (282)
38 1awc_B Protein (GA binding pro 99.9 4.3E-27 1.5E-31 156.0 12.1 122 22-167 31-152 (153)
39 2f8y_A Notch homolog 1, transl 99.9 9.5E-27 3.2E-31 163.0 14.3 146 24-175 57-218 (223)
40 1s70_B 130 kDa myosin-binding 99.9 8.7E-27 3E-31 169.9 14.5 152 22-179 37-263 (299)
41 2xai_A ASB-9, ankyrin repeat a 99.9 7.9E-27 2.7E-31 167.5 14.0 146 24-176 2-162 (261)
42 2rfa_A Transient receptor pote 99.9 1.8E-26 6.1E-31 162.6 14.4 131 21-175 33-185 (232)
43 2etb_A Transient receptor pote 99.9 5E-27 1.7E-31 167.9 11.7 135 23-174 88-247 (256)
44 3jxi_A Vanilloid receptor-rela 99.9 2.6E-27 8.9E-32 169.7 9.9 136 23-175 91-252 (260)
45 3d9h_A CDNA FLJ77766, highly s 99.9 1.9E-26 6.4E-31 167.6 14.5 155 15-176 49-218 (285)
46 1k1a_A B-cell lymphoma 3-encod 99.9 3.1E-26 1.1E-30 162.0 14.8 156 22-179 43-214 (241)
47 3kea_A K1L; tropism, ANK repea 99.9 1.1E-26 3.8E-31 168.8 12.7 148 23-178 29-225 (285)
48 1bd8_A P19INK4D CDK4/6 inhibit 99.9 1.1E-26 3.9E-31 154.3 11.6 124 21-170 32-155 (156)
49 3utm_A Tankyrase-1; tankyrase, 99.9 4E-26 1.4E-30 169.4 15.7 39 141-179 273-311 (351)
50 3b7b_A Euchromatic histone-lys 99.9 2.2E-26 7.6E-31 162.6 13.6 153 22-179 41-208 (237)
51 1k1a_A B-cell lymphoma 3-encod 99.9 5.4E-26 1.8E-30 160.8 15.1 154 20-179 4-181 (241)
52 3c5r_A BARD-1, BRCA1-associate 99.9 9.6E-28 3.3E-32 156.4 5.4 129 21-173 6-134 (137)
53 3utm_A Tankyrase-1; tankyrase, 99.9 1.2E-26 4E-31 172.3 11.9 153 21-179 54-278 (351)
54 3b7b_A Euchromatic histone-lys 99.9 3.5E-26 1.2E-30 161.5 13.8 154 20-179 6-175 (237)
55 2dzn_A Probable 26S proteasome 99.9 3.6E-26 1.2E-30 160.5 13.7 149 25-179 2-172 (228)
56 1n11_A Ankyrin; clathrin, BAND 99.9 3.2E-26 1.1E-30 175.2 14.4 132 24-179 244-375 (437)
57 3kea_A K1L; tropism, ANK repea 99.9 3.7E-26 1.3E-30 166.1 13.7 132 34-174 8-155 (285)
58 1ycs_B 53BP2, P53BP2; ankyrin 99.9 6E-27 2.1E-31 166.2 9.1 133 23-179 35-170 (239)
59 1s70_B 130 kDa myosin-binding 99.9 7.4E-26 2.5E-30 165.0 15.1 119 55-179 37-230 (299)
60 1ycs_B 53BP2, P53BP2; ankyrin 99.9 2.6E-27 9E-32 168.0 7.2 131 24-179 4-134 (239)
61 2etb_A Transient receptor pote 99.9 9.8E-27 3.4E-31 166.4 10.1 130 21-174 39-207 (256)
62 3ehr_A Osteoclast-stimulating 99.9 1.4E-27 4.9E-32 167.5 5.7 135 22-179 70-204 (222)
63 2xai_A ASB-9, ankyrin repeat a 99.9 6.4E-26 2.2E-30 162.8 14.1 152 21-180 32-198 (261)
64 3ljn_A Hypothetical protein; a 99.9 2.2E-26 7.5E-31 172.3 11.6 38 142-179 205-242 (364)
65 3ljn_A Hypothetical protein; a 99.9 3.2E-26 1.1E-30 171.4 11.6 130 21-174 134-270 (364)
66 1wdy_A 2-5A-dependent ribonucl 99.9 1E-25 3.5E-30 162.7 13.8 133 22-178 145-283 (285)
67 1ikn_D Protein (I-kappa-B-alph 99.9 3.6E-26 1.2E-30 161.6 10.9 130 22-175 75-211 (236)
68 3d9h_A CDNA FLJ77766, highly s 99.9 1.6E-25 5.4E-30 162.7 13.9 152 21-180 88-254 (285)
69 1bd8_A P19INK4D CDK4/6 inhibit 99.9 1.3E-25 4.4E-30 149.2 12.2 129 25-179 2-131 (156)
70 3t8k_A Uncharacterized protein 99.9 4.2E-27 1.4E-31 161.0 5.1 133 23-179 36-185 (186)
71 1n11_A Ankyrin; clathrin, BAND 99.9 1.6E-25 5.4E-30 171.3 14.3 153 21-179 10-177 (437)
72 3aaa_C Myotrophin, protein V-1 99.9 1.7E-26 5.9E-31 147.8 7.1 112 23-158 5-116 (123)
73 3hra_A Ankyrin repeat family p 99.9 2.5E-25 8.7E-30 153.4 13.4 132 24-179 4-138 (201)
74 3jxi_A Vanilloid receptor-rela 99.9 4.6E-26 1.6E-30 163.2 9.5 128 23-174 44-211 (260)
75 2pnn_A Transient receptor pote 99.9 1.1E-25 3.9E-30 162.3 11.3 131 21-175 50-220 (273)
76 4b93_B Ankyrin repeat domain-c 99.9 6.3E-26 2.2E-30 163.6 9.8 135 21-179 48-183 (269)
77 4g8k_A 2-5A-dependent ribonucl 99.9 4.1E-25 1.4E-29 163.8 13.8 132 22-177 165-302 (337)
78 1wdy_A 2-5A-dependent ribonucl 99.9 9.1E-25 3.1E-29 157.6 14.6 152 22-179 36-217 (285)
79 3lvq_E ARF-GAP with SH3 domain 99.9 3.9E-25 1.3E-29 172.0 13.2 127 27-177 134-269 (497)
80 3eu9_A Huntingtin-interacting 99.9 1.3E-24 4.3E-29 153.3 14.6 152 22-179 39-208 (240)
81 3deo_A Signal recognition part 99.9 2.5E-25 8.4E-30 151.8 9.5 124 22-170 41-181 (183)
82 1dcq_A PYK2-associated protein 99.9 1.4E-24 4.8E-29 157.2 13.7 125 26-174 131-264 (278)
83 2fo1_E LIN-12 protein; beta-ba 99.9 8.7E-25 3E-29 164.4 12.9 156 21-179 162-344 (373)
84 4hbd_A KN motif and ankyrin re 99.9 3.8E-25 1.3E-29 160.1 9.9 128 20-171 140-273 (276)
85 3ui2_A Signal recognition part 99.9 1.6E-25 5.4E-30 159.4 7.2 142 23-173 43-185 (244)
86 2fo1_E LIN-12 protein; beta-ba 99.9 1.7E-24 5.7E-29 162.8 13.2 130 22-174 232-372 (373)
87 3eu9_A Huntingtin-interacting 99.9 2.8E-24 9.5E-29 151.6 13.1 133 23-179 7-140 (240)
88 1n0q_A 3ANK, 3 ankyrin repeats 99.9 2.2E-24 7.4E-29 131.4 10.3 93 57-173 1-93 (93)
89 2b0o_E UPLC1; arfgap, structur 99.9 1.4E-24 4.7E-29 158.9 11.0 126 25-174 151-285 (301)
90 3t8k_A Uncharacterized protein 99.9 4.3E-25 1.5E-29 151.0 5.8 129 25-179 6-152 (186)
91 3jue_A Arfgap with coiled-coil 99.9 5.2E-24 1.8E-28 159.5 11.7 125 25-173 199-326 (368)
92 4g8k_A 2-5A-dependent ribonucl 99.9 8.9E-24 3E-28 156.6 12.6 133 22-178 22-155 (337)
93 3c5r_A BARD-1, BRCA1-associate 99.9 1.3E-23 4.4E-28 136.7 11.3 107 48-179 1-107 (137)
94 1n0q_A 3ANK, 3 ankyrin repeats 99.9 5.3E-23 1.8E-27 125.2 9.2 92 24-121 1-92 (93)
95 1d9s_A Cyclin-dependent kinase 99.9 2.7E-23 9.1E-28 135.1 8.2 106 49-179 3-109 (136)
96 3aaa_C Myotrophin, protein V-1 99.9 1.1E-22 3.8E-27 129.9 9.7 101 55-179 4-104 (123)
97 2vge_A RELA-associated inhibit 99.9 1.3E-22 4.6E-27 143.0 10.7 115 41-179 1-118 (229)
98 2l6b_A NR1C; ankyrin, consensu 99.9 2.8E-23 9.4E-28 131.2 5.2 100 54-177 5-104 (115)
99 2l6b_A NR1C; ankyrin, consensu 99.9 1.4E-22 4.8E-27 127.9 6.1 108 21-152 5-112 (115)
100 2jab_A H10-2-G3; HER2, darpin, 99.9 7.4E-22 2.5E-26 128.3 8.7 102 54-179 10-111 (136)
101 1n0r_A 4ANK, 4 ankyrin repeats 99.9 5E-21 1.7E-25 122.2 11.7 99 57-179 1-99 (126)
102 2b0o_E UPLC1; arfgap, structur 99.9 8.4E-22 2.9E-26 144.2 8.1 111 21-161 186-299 (301)
103 2aja_A Ankyrin repeat family p 99.9 9.5E-23 3.3E-27 153.1 2.1 124 24-172 91-223 (376)
104 3ehr_A Osteoclast-stimulating 99.8 2.9E-21 9.9E-26 135.2 8.5 103 54-180 69-172 (222)
105 1sw6_A Regulatory protein SWI6 99.8 9.4E-22 3.2E-26 145.5 5.9 119 28-170 100-227 (327)
106 3deo_A Signal recognition part 99.8 3.7E-21 1.3E-25 131.0 7.4 100 55-179 41-141 (183)
107 1bi7_B P16INK4A, MTS1, multipl 99.8 1.6E-21 5.3E-26 129.6 5.0 110 21-155 41-151 (156)
108 3ui2_A Signal recognition part 99.8 1.9E-20 6.5E-25 133.1 8.3 127 25-179 15-142 (244)
109 2zgd_A 3 repeat synthetic anky 99.8 3.6E-20 1.2E-24 116.1 8.0 89 55-167 21-109 (110)
110 2aja_A Ankyrin repeat family p 99.8 2.2E-22 7.5E-27 151.2 -3.8 120 24-175 127-252 (376)
111 2zgd_A 3 repeat synthetic anky 99.8 2E-19 6.8E-24 112.6 8.9 91 20-116 19-109 (110)
112 1dcq_A PYK2-associated protein 99.8 2.8E-19 9.6E-24 129.4 10.0 96 22-123 166-264 (278)
113 3lvq_E ARF-GAP with SH3 domain 99.8 5.4E-19 1.9E-23 137.4 9.9 96 22-123 168-266 (497)
114 3jue_A Arfgap with coiled-coil 99.8 1.8E-18 6E-23 129.6 10.0 132 23-175 233-366 (368)
115 1gp8_A Protein (scaffolding pr 45.1 21 0.00073 16.9 2.3 17 152-168 17-33 (40)
116 4g26_A Pentatricopeptide repea 24.7 1.5E+02 0.0052 22.8 5.6 87 27-119 110-200 (501)
117 3mkq_B Coatomer subunit alpha; 20.7 1.9E+02 0.0064 19.0 7.6 21 26-46 9-29 (177)
No 1
>4gpm_A Engineered protein OR264; de novo protein, structural genomics, PSI-biology, northeast structural genomics consortium, NESG; 2.00A {Synthetic construct} PDB: 4gmr_A
Probab=100.00 E-value=2.9e-32 Score=183.97 Aligned_cols=133 Identities=26% Similarity=0.288 Sum_probs=117.6
Q ss_pred cccCCCHHHHHHHHcCCcHHHHHHHHHhcccccccCCCCchhHHHHhhhhhhhhHHHHHHHHHhhccccccccccCCCcH
Q 041785 21 KQSQMDPNLFKAAADGSVEPFKDMAREVIESSLTVHTKNTILHINIICQETENASTKFVEEILEICPALLLQVNAKGDTP 100 (181)
Q Consensus 21 ~~~~~~t~l~~a~~~g~~~~~~~ll~~~~~~~~~~~~g~t~Lh~a~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~g~t~ 100 (181)
....|.||||+|+..++.++++.|++.|++++.++..|.||||+| +..++.+++++|++. |++++.+|..|+||
T Consensus 33 ~d~~g~t~l~~a~~~~~~~~~~~ll~~gad~~~~d~~g~TpLh~A--~~~g~~~~v~~Ll~~----gadvn~~d~~G~Tp 106 (169)
T 4gpm_A 33 SDSDGRTPLHHAAENGHKEVVKLLISKGADVNAKDSDGRTPLHHA--AENGHKEVVKLLISK----GADVNAKDSDGRTP 106 (169)
T ss_dssp CCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHH--HHTTCHHHHHHHHHT----TCCTTCCCTTSCCH
T ss_pred cCCCCCCHHHHHHHcCCHHHHHHHHhcccchhhhccCCCCHHHHH--HHcCCHHHHHHHHHC----cCCCCCCCCCCCCH
Confidence 455789999999999999999999999999988899999999999 999999999999986 89999999999999
Q ss_pred HHHHHHcCCHHHHHHHHHhhhhccCCCCCCcchHHHHHHHhhcccCCCchHHHHHHHcCCHHHHHHHHHcCCCCCCC
Q 041785 101 LHLAAKYSHFDIVRVLIERAQLAQHGDEEPESGIEAFRQMIRMVNNEKNTALHEAVSHGNVEVVKILTREDPDYPYS 177 (181)
Q Consensus 101 L~~a~~~~~~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~t~l~~A~~~~~~~~~~~Ll~~g~~~~~~ 177 (181)
||+|+..|+.+++++|++.|+++ +.+|..|+|||++|+..|+.+++++|+++||+++.-
T Consensus 107 Lh~A~~~g~~~~v~~Ll~~gad~------------------~~~d~~G~TpL~~A~~~g~~~iv~~Ll~~GA~ie~~ 165 (169)
T 4gpm_A 107 LHHAAENGHKEVVKLLISKGADV------------------NTSDSDGRTPLDLAREHGNEEVVKLLEKQGGWLEHH 165 (169)
T ss_dssp HHHHHHTTCHHHHHHHHHTTCCT------------------TCCCTTSCCHHHHHHHTTCHHHHHHHHTC-------
T ss_pred HHHHHHcCCHHHHHHHHHcCCCc------------------cccCCCCCCHHHHHHHcCCHHHHHHHHHCCCCcCCC
Confidence 99999999999999999999888 889999999999999999999999999999998754
No 2
>4gpm_A Engineered protein OR264; de novo protein, structural genomics, PSI-biology, northeast structural genomics consortium, NESG; 2.00A {Synthetic construct} PDB: 4gmr_A
Probab=99.97 E-value=5e-31 Score=177.90 Aligned_cols=130 Identities=26% Similarity=0.367 Sum_probs=124.5
Q ss_pred HHHHHHHHcCCcHHHHHHHHHhcccccccCCCCchhHHHHhhhhhhhhHHHHHHHHHhhccccccccccCCCcHHHHHHH
Q 041785 27 PNLFKAAADGSVEPFKDMAREVIESSLTVHTKNTILHINIICQETENASTKFVEEILEICPALLLQVNAKGDTPLHLAAK 106 (181)
Q Consensus 27 t~l~~a~~~g~~~~~~~ll~~~~~~~~~~~~g~t~Lh~a~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~g~t~L~~a~~ 106 (181)
++|+.|++.|+.++|+.|++.|++++.+|..|.||||+| +..++.++++.+++. +++++.++..|+||||+|+.
T Consensus 6 ~~L~~Aa~~G~~~~v~~Ll~~Gadvn~~d~~g~t~l~~a--~~~~~~~~~~~ll~~----gad~~~~d~~g~TpLh~A~~ 79 (169)
T 4gpm_A 6 KRLIEAAENGNKDRVKDLIENGADVNASDSDGRTPLHHA--AENGHKEVVKLLISK----GADVNAKDSDGRTPLHHAAE 79 (169)
T ss_dssp HHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHH--HHTTCHHHHHHHHHT----TCCTTCCCTTSCCHHHHHHH
T ss_pred HHHHHHHHcCCHHHHHHHHHCCCCCCCcCCCCCCHHHHH--HHcCCHHHHHHHHhc----ccchhhhccCCCCHHHHHHH
Confidence 469999999999999999999999999999999999999 999999999999986 99999999999999999999
Q ss_pred cCCHHHHHHHHHhhhhccCCCCCCcchHHHHHHHhhcccCCCchHHHHHHHcCCHHHHHHHHHcCCCCCCCcCC
Q 041785 107 YSHFDIVRVLIERAQLAQHGDEEPESGIEAFRQMIRMVNNEKNTALHEAVSHGNVEVVKILTREDPDYPYSANN 180 (181)
Q Consensus 107 ~~~~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~t~l~~A~~~~~~~~~~~Ll~~g~~~~~~~~~ 180 (181)
.|+.+++++|++.|+++ +.+|..|+||||+|+..|+.+++++|+++|++++.++++
T Consensus 80 ~g~~~~v~~Ll~~gadv------------------n~~d~~G~TpLh~A~~~g~~~~v~~Ll~~gad~~~~d~~ 135 (169)
T 4gpm_A 80 NGHKEVVKLLISKGADV------------------NAKDSDGRTPLHHAAENGHKEVVKLLISKGADVNTSDSD 135 (169)
T ss_dssp TTCHHHHHHHHHTTCCT------------------TCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTT
T ss_pred cCCHHHHHHHHHCcCCC------------------CCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCccccCCC
Confidence 99999999999999998 899999999999999999999999999999999988753
No 3
>1d9s_A Cyclin-dependent kinase 4 inhibitor B; helix-turn-helix, ankyrin repeat, signaling protein; NMR {Mus musculus} SCOP: i.11.1.1
Probab=99.97 E-value=1.9e-30 Score=169.14 Aligned_cols=129 Identities=16% Similarity=0.134 Sum_probs=122.5
Q ss_pred hcccCCCHHHHHHHHcCCcHHHHHHHHHhcccccccCCCCchhHHHHhhhhhhhhHHHHHHHHHhhccccccccccC-CC
Q 041785 20 IKQSQMDPNLFKAAADGSVEPFKDMAREVIESSLTVHTKNTILHINIICQETENASTKFVEEILEICPALLLQVNAK-GD 98 (181)
Q Consensus 20 ~~~~~~~t~l~~a~~~g~~~~~~~ll~~~~~~~~~~~~g~t~Lh~a~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~-g~ 98 (181)
.....+.||||+|+..|+.+++++|++.|++++.++..|.||||+| +. ++.+++++|++. +++++.++.. |.
T Consensus 7 ~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A--~~-~~~~~v~~Ll~~----g~~~~~~~~~~g~ 79 (136)
T 1d9s_A 7 MLGGSSDAGLATAAARGQVETVRQLLEAGADPNALNRFGRRPIQVM--MM-GSAQVAELLLLH----GAEPNCADPATLT 79 (136)
T ss_dssp CCCCCCSCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTCCTTTTTS--TT-SCHHHHHHHHHH----TCCSSCCBTTTTB
T ss_pred CCCCCCccHHHHHHHcCCHHHHHHHHHcCCCcCCcCCCCCCHHHHH--Hc-CCHHHHHHHHHC----CCCCCCcCCCCCC
Confidence 3455789999999999999999999999999998999999999999 99 999999999998 9999999999 99
Q ss_pred cHHHHHHHcCCHHHHHHHHHhhhhccCCCCCCcchHHHHHHHhhcccCCCchHHHHHHHcCCHHHHHHHHHcCCC
Q 041785 99 TPLHLAAKYSHFDIVRVLIERAQLAQHGDEEPESGIEAFRQMIRMVNNEKNTALHEAVSHGNVEVVKILTREDPD 173 (181)
Q Consensus 99 t~L~~a~~~~~~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~t~l~~A~~~~~~~~~~~Ll~~g~~ 173 (181)
||||+|+..++.+++++|++.|+++ +.+|..|.||||+|+..++.+++++|+++|+|
T Consensus 80 t~L~~A~~~~~~~~v~~Ll~~ga~~------------------~~~d~~g~tpl~~A~~~~~~~~~~~Ll~~Gad 136 (136)
T 1d9s_A 80 RPVHDAAREGFLDTLVVLHRAGARL------------------DVCDAWGRLPVDLAEEQGHRDIARYLHAATGD 136 (136)
T ss_dssp CHHHHHHHHTCHHHHHHHHHTCCCC------------------CCCSSSSSCHHHHHHHHTCHHHHHHHHHHHCC
T ss_pred CHHHHHHHcCCHHHHHHHHHcCCCC------------------CccCCCCCCHHHHHHHcCCHHHHHHHHHcCCC
Confidence 9999999999999999999999988 88999999999999999999999999999986
No 4
>1bi7_B P16INK4A, MTS1, multiple tumor suppressor; cyclin dependent kinase, cyclin dependent kinase inhibitory protein, CDK, cell cycle; 3.40A {Homo sapiens} SCOP: d.211.1.1 PDB: 1a5e_A 1dc2_A 2a5e_A
Probab=99.97 E-value=2.7e-30 Score=172.12 Aligned_cols=135 Identities=16% Similarity=0.058 Sum_probs=118.9
Q ss_pred hcccCCCHHHHHHHHcCCcHHHHHHHHHhcccccccCCCCchhHHHHhhhhhhhhHHHHHHHHHhhccccccccccCCCc
Q 041785 20 IKQSQMDPNLFKAAADGSVEPFKDMAREVIESSLTVHTKNTILHINIICQETENASTKFVEEILEICPALLLQVNAKGDT 99 (181)
Q Consensus 20 ~~~~~~~t~l~~a~~~g~~~~~~~ll~~~~~~~~~~~~g~t~Lh~a~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~g~t 99 (181)
.....+.||||+|+..|+.+++++|++.|++++..+..|.||||+| + .++.+++++|++. +++++.++..|.|
T Consensus 7 ~~~~~~~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A--~-~~~~~~v~~Ll~~----g~~~~~~d~~g~t 79 (156)
T 1bi7_B 7 SSMEPSADWLATAAARGRVEEVRALLEAGANPNAPNSYGRRPIQVM--M-MGSARVAELLLLH----GAEPNCADPATLT 79 (156)
T ss_dssp ---CCSTTHHHHHHHHTCHHHHHHHHTTTCCTTCCCSSSCCTTTSS--C-TTCHHHHHHHHTT----TCCCCCCCTTTCC
T ss_pred CCCccchHHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCHHHHH--H-cCCHHHHHHHHHc----CCCCCCcCCCCCc
Confidence 4456789999999999999999999999999988899999999998 7 8899999999986 9999999999999
Q ss_pred -HHHHHHHcCCHHHHHHHHHhhhhccCCCCCCcchHHHHHHHhhcccCCCchHHHHHHHcCCHHHHHHHHHcCCCCCCCc
Q 041785 100 -PLHLAAKYSHFDIVRVLIERAQLAQHGDEEPESGIEAFRQMIRMVNNEKNTALHEAVSHGNVEVVKILTREDPDYPYSA 178 (181)
Q Consensus 100 -~L~~a~~~~~~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~t~l~~A~~~~~~~~~~~Ll~~g~~~~~~~ 178 (181)
|||+|+..++.+++++|++.|+++ +.+|..|+||||+|+..|+.+++++|+++|++++..+
T Consensus 80 tpL~~A~~~~~~~~v~~Ll~~ga~~------------------~~~d~~g~tpl~~A~~~~~~~~v~~Ll~~ga~~~~~~ 141 (156)
T 1bi7_B 80 RPVHDAAREGFLDTLVVLHRAGARL------------------DVRDAWGRLPVDLAEELGHRDVARYLRAAAGGTRGSN 141 (156)
T ss_dssp CHHHHHHHHTCHHHHHHHHHHTCCS------------------SCCCTTCCCHHHHHHHHTCHHHHHHHSSCC-------
T ss_pred HHHHHHHHCCCHHHHHHHHHcCCCC------------------cccCCCCCCHHHHHHHhCHHHHHHHHHHcCCCCCccC
Confidence 999999999999999999999988 8899999999999999999999999999999998775
Q ss_pred C
Q 041785 179 N 179 (181)
Q Consensus 179 ~ 179 (181)
.
T Consensus 142 ~ 142 (156)
T 1bi7_B 142 H 142 (156)
T ss_dssp -
T ss_pred c
Confidence 4
No 5
>4b93_B Ankyrin repeat domain-containing protein 27; endocytosis, exocytosis, snare; 2.00A {Homo sapiens}
Probab=99.97 E-value=1.2e-29 Score=183.12 Aligned_cols=136 Identities=24% Similarity=0.270 Sum_probs=128.8
Q ss_pred cccCCCHHHHHHHHcCCcHHHHHHHHHhcccccccCCCCchhHHHHhhhhhhhhHHHHHHHHHhhccccccccccCCCcH
Q 041785 21 KQSQMDPNLFKAAADGSVEPFKDMAREVIESSLTVHTKNTILHINIICQETENASTKFVEEILEICPALLLQVNAKGDTP 100 (181)
Q Consensus 21 ~~~~~~t~l~~a~~~g~~~~~~~ll~~~~~~~~~~~~g~t~Lh~a~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~g~t~ 100 (181)
....|.||||+|+..|+.+++++|++.++++...+..|.||+|+| +..++.++++.|++. +++++.+|..|+||
T Consensus 82 ~d~~G~TpLh~A~~~g~~~~v~~Ll~~~a~~~~~~~~g~t~l~~a--~~~~~~~~~~~Ll~~----g~~~n~~d~~g~Tp 155 (269)
T 4b93_B 82 TSQDGSSPLHVAALHGRADLIPLLLKHGANAGARNADQAVPLHLA--CQQGHFQVVKCLLDS----NAKPNKKDLSGNTP 155 (269)
T ss_dssp CCTTSCCHHHHHHHTTCTTHHHHHHHTTCCTTCCCTTCCCHHHHH--HHHTCHHHHHHHHHT----TCCSCCCCTTCCCH
T ss_pred cCCCCCCHHHHHHHcCcHHHHHHHHhcCCCcCccCCCCCCccccc--cccChHHHHHHHHHC----CCCCCCCCCCCCCH
Confidence 356789999999999999999999999999998999999999999 999999999999986 99999999999999
Q ss_pred HHHHHHcCCHHHHHHHHHhhhhccCCCCCCcchHHHHHHHhhcccCCCchHHHHHHHcCCHHHHHHHHHcCCCCCCCcCC
Q 041785 101 LHLAAKYSHFDIVRVLIERAQLAQHGDEEPESGIEAFRQMIRMVNNEKNTALHEAVSHGNVEVVKILTREDPDYPYSANN 180 (181)
Q Consensus 101 L~~a~~~~~~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~t~l~~A~~~~~~~~~~~Ll~~g~~~~~~~~~ 180 (181)
||+|+..|+.+++++|++.|+++ +.++..|+||||+|+..|+.+++++|+++|++++.+++.
T Consensus 156 L~~A~~~g~~~~v~~Ll~~gadv------------------n~~~~~g~t~Lh~A~~~g~~~~v~~Ll~~Gad~~~~d~~ 217 (269)
T 4b93_B 156 LIYACSGGHHELVALLLQHGASI------------------NASNNKGNTALHEAVIEKHVFVVELLLLHGASVQVLNKR 217 (269)
T ss_dssp HHHHHHTTCGGGHHHHHHTTCCT------------------TCBCTTSCBHHHHHHHTTCHHHHHHHHHTTCCSCCCCTT
T ss_pred HHHHHHCCCHHHHHHHHHCCCCC------------------CccccCCCcHHHHHHHcCCHHHHHHHHHCCCCCCCcCCC
Confidence 99999999999999999999988 899999999999999999999999999999999988653
No 6
>2rfm_A Putative ankyrin repeat protein TV1425; ANK repeat, protein binding; HET: BU2 GOL; 1.65A {Thermoplasma volcanium}
Probab=99.96 E-value=4.7e-29 Score=171.32 Aligned_cols=136 Identities=17% Similarity=0.090 Sum_probs=127.5
Q ss_pred hcccCCCHHHHHHHHcCCcHHHHHHHHHhcccccccCCCCchhHHHHhhhhhhhhHHHHHHHHHhhccccccccccCCCc
Q 041785 20 IKQSQMDPNLFKAAADGSVEPFKDMAREVIESSLTVHTKNTILHINIICQETENASTKFVEEILEICPALLLQVNAKGDT 99 (181)
Q Consensus 20 ~~~~~~~t~l~~a~~~g~~~~~~~ll~~~~~~~~~~~~g~t~Lh~a~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~g~t 99 (181)
.....|.||||+|+..|+.+++++|++.+.+++..+..|.||||+| +..++.+++++|++. +.+++.++..|.|
T Consensus 30 ~~d~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~g~t~L~~A--~~~~~~~~v~~Ll~~----g~~~~~~~~~g~t 103 (192)
T 2rfm_A 30 YRDSYNRTPLMVACMLGMENAIDKLVENFDKLEDKDIEGSTALIWA--VKNNRLGIAEKLLSK----GSNVNTKDFSGKT 103 (192)
T ss_dssp CCCTTCCCHHHHHHHHTCGGGHHHHHHHHCCTTCCCTTSCCHHHHH--HHTTCHHHHHHHHHH----TCCTTCCCTTSCC
T ss_pred CcCCCCCCHHHHHHHcCCHHHHHHHHHhccccccccccCccHHHHH--HHcCCHHHHHHHHHC----CCCCCCCCCCCCc
Confidence 3466799999999999999999999999999888899999999999 999999999999998 8999999999999
Q ss_pred HHHHHHHcCCHHHHHHHHHhhhhccCCCCCCcchHHHHHHHhhcccCCCchHHHHHHHcCCHHHHHHHHHcCCCCCCCcC
Q 041785 100 PLHLAAKYSHFDIVRVLIERAQLAQHGDEEPESGIEAFRQMIRMVNNEKNTALHEAVSHGNVEVVKILTREDPDYPYSAN 179 (181)
Q Consensus 100 ~L~~a~~~~~~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~t~l~~A~~~~~~~~~~~Ll~~g~~~~~~~~ 179 (181)
|||+|+..++.+++++|++.|+++ +.+|..|.||||+|+..|+.+++++|+++|++++..+.
T Consensus 104 ~L~~A~~~~~~~~v~~Ll~~g~~~------------------~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~~~ 165 (192)
T 2rfm_A 104 PLMWSIIFGYSEMSYFLLEHGANV------------------NDRNLEGETPLIVASKYGRSEIVKKLLELGADISARDL 165 (192)
T ss_dssp HHHHHHHHTCHHHHHHHHHTTCCS------------------SCCCTTCCCHHHHHHHHTCHHHHHHHHHTTCCTTCBCT
T ss_pred HHHHHHHcCCHHHHHHHHHCCCCC------------------CCCCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCCcCC
Confidence 999999999999999999999988 88899999999999999999999999999999987764
No 7
>1n0r_A 4ANK, 4 ankyrin repeats; structural protein; 1.50A {} SCOP: k.37.1.1
Probab=99.96 E-value=5.6e-29 Score=159.48 Aligned_cols=126 Identities=27% Similarity=0.346 Sum_probs=120.6
Q ss_pred CCCHHHHHHHHcCCcHHHHHHHHHhcccccccCCCCchhHHHHhhhhhhhhHHHHHHHHHhhccccccccccCCCcHHHH
Q 041785 24 QMDPNLFKAAADGSVEPFKDMAREVIESSLTVHTKNTILHINIICQETENASTKFVEEILEICPALLLQVNAKGDTPLHL 103 (181)
Q Consensus 24 ~~~t~l~~a~~~g~~~~~~~ll~~~~~~~~~~~~g~t~Lh~a~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~g~t~L~~ 103 (181)
+|.||||.|+..|+.+++++|++.+.+++..+..|.||||+| +..++.+++++|++. +.+++.++..|.||||+
T Consensus 1 ~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~g~t~L~~A--~~~~~~~~~~~Ll~~----g~~~~~~~~~g~t~l~~ 74 (126)
T 1n0r_A 1 NGRTPLHLAARNGHLEVVKLLLEAGADVNAKDKNGRTPLHLA--ARNGHLEVVKLLLEA----GADVNAKDKNGRTPLHL 74 (126)
T ss_dssp CCCCHHHHHHHHTCHHHHHHHHHHTCCTTCCCTTSCCHHHHH--HHHTCHHHHHHHHHT----TCCTTCCCTTSCCHHHH
T ss_pred CCccHHHHHHHcCcHHHHHHHHHcCCCCCCcCCCCCcHHHHH--HHcCcHHHHHHHHHc----CCCCcccCCCCCcHHHH
Confidence 478999999999999999999999999888899999999999 999999999999996 89999999999999999
Q ss_pred HHHcCCHHHHHHHHHhhhhccCCCCCCcchHHHHHHHhhcccCCCchHHHHHHHcCCHHHHHHHHHcCCC
Q 041785 104 AAKYSHFDIVRVLIERAQLAQHGDEEPESGIEAFRQMIRMVNNEKNTALHEAVSHGNVEVVKILTREDPD 173 (181)
Q Consensus 104 a~~~~~~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~t~l~~A~~~~~~~~~~~Ll~~g~~ 173 (181)
|+..++.+++++|++.|+++ +.+|..|.||+++|+..++.+++++|+++|++
T Consensus 75 A~~~~~~~~~~~Ll~~g~~~------------------~~~~~~g~t~l~~A~~~~~~~~~~~Ll~~Gad 126 (126)
T 1n0r_A 75 AARNGHLEVVKLLLEAGADV------------------NAKDKNGRTPLHLAARNGHLEVVKLLLEAGAY 126 (126)
T ss_dssp HHHTTCHHHHHHHHHTTCCT------------------TCCCTTSCCHHHHHHHTTCHHHHHHHHHHTCC
T ss_pred HHHcChHHHHHHHHHcCCCC------------------cccCCCCCCHHHHHHHcCcHHHHHHHHHcCCC
Confidence 99999999999999999887 88899999999999999999999999999986
No 8
>3v31_A Ankyrin repeat family A protein 2; structural genomics consortium, SGC, ankra2, ANK repeat, Pro binding, HDAC4; 1.57A {Homo sapiens} PDB: 3v2x_A 3v2o_A 3so8_A
Probab=99.96 E-value=6.1e-29 Score=167.14 Aligned_cols=131 Identities=19% Similarity=0.118 Sum_probs=91.6
Q ss_pred CCHHHHHHHHcCCcHHHHHHHHHhcccccccCCCCchhHHHHhhhhhhhhHHHHHHHHHhhccccccccccCCCcHHHHH
Q 041785 25 MDPNLFKAAADGSVEPFKDMAREVIESSLTVHTKNTILHINIICQETENASTKFVEEILEICPALLLQVNAKGDTPLHLA 104 (181)
Q Consensus 25 ~~t~l~~a~~~g~~~~~~~ll~~~~~~~~~~~~g~t~Lh~a~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~g~t~L~~a 104 (181)
+.||||.|+..|+.+++++|++.+.+.+.++..|.||||+| +..++.+++++|++. +.+++.++..|.||||+|
T Consensus 3 ~~t~L~~A~~~g~~~~v~~ll~~~~~~~~~~~~g~t~L~~A--~~~~~~~~v~~Ll~~----g~~~~~~~~~g~t~L~~A 76 (167)
T 3v31_A 3 NSLSVHQLAAQGEMLYLATRIEQENVINHTDEEGFTPLMWA--AAHGQIAVVEFLLQN----GADPQLLGKGRESALSLA 76 (167)
T ss_dssp TCCCHHHHHHTTCHHHHHHHHHHSSCTTCCCTTSCCHHHHH--HHTTCHHHHHHHHHT----TCCTTCCCTTCCCHHHHH
T ss_pred CcchHHHHHHCCCHHHHHHHHHcCCCcCCCCCCCCCHHHHH--HHCCCHHHHHHHHHc----CCCCCCcCCCCCcHHHHH
Confidence 56677777777777777777776666666666777777777 777777777777665 666666677777777777
Q ss_pred HHcCCHHHHHHHHHhhhhccCCCCCCcchHHHHHHHhhcccCCCchHHHHHHHcCCHHHHHHHHHcCCCCCCCcC
Q 041785 105 AKYSHFDIVRVLIERAQLAQHGDEEPESGIEAFRQMIRMVNNEKNTALHEAVSHGNVEVVKILTREDPDYPYSAN 179 (181)
Q Consensus 105 ~~~~~~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~t~l~~A~~~~~~~~~~~Ll~~g~~~~~~~~ 179 (181)
+..++.+++++|++.|+++ +.+|..|+||||+|+..|+.+++++|+++|++++..+.
T Consensus 77 ~~~~~~~~v~~Ll~~g~~~------------------~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~ 133 (167)
T 3v31_A 77 CSKGYTDIVKMLLDCGVDV------------------NEYDWNGGTPLLYAVHGNHVKCVKMLLESGADPTIETD 133 (167)
T ss_dssp HHHTCHHHHHHHHHHTCCT------------------TCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCT
T ss_pred HHcCCHHHHHHHHHCCCCC------------------CcCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCcCC
Confidence 7777777777777776665 66666677777777777777777777777776665543
No 9
>2jab_A H10-2-G3; HER2, darpin, ankyrin repeat protein, membrane protein, human epidermal growth factor receptor 2, de novo protein; 1.70A {} PDB: 3hg0_D 2xzt_G 2xzd_G 2y0b_G 2v4h_C
Probab=99.96 E-value=4.4e-29 Score=162.65 Aligned_cols=126 Identities=22% Similarity=0.250 Sum_probs=118.6
Q ss_pred ccCCCHHHHHHHHcCCcHHHHHHHHHhcccccccCCCCchhHHHHhhhhhhhhHHHHHHHHHhhccccccccccCCCcHH
Q 041785 22 QSQMDPNLFKAAADGSVEPFKDMAREVIESSLTVHTKNTILHINIICQETENASTKFVEEILEICPALLLQVNAKGDTPL 101 (181)
Q Consensus 22 ~~~~~t~l~~a~~~g~~~~~~~ll~~~~~~~~~~~~g~t~Lh~a~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~g~t~L 101 (181)
...+.||||+|+..|+.+++++|++.|.+++..+..|.||||+| +..++.+++++|++. +++++.++..|.|||
T Consensus 11 ~~~~~t~l~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A--~~~~~~~~v~~Ll~~----g~~~~~~d~~g~t~L 84 (136)
T 2jab_A 11 GSDLGKKLLEAARAGQDDEVRILMANGADVNAKDEYGLTPLYLA--TAHGHLEIVEVLLKN----GADVNAVDAIGFTPL 84 (136)
T ss_dssp -CHHHHHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHH--HHHTCHHHHHHHHHT----TCCTTCCCTTCCCHH
T ss_pred cccccHHHHHHHHhCCHHHHHHHHHcCCCCCCcCCCCCCHHHHH--HHcCCHHHHHHHHHc----CCCCCcCCCCCCCHH
Confidence 44578999999999999999999999999988899999999999 999999999999997 999999999999999
Q ss_pred HHHHHcCCHHHHHHHHHhhhhccCCCCCCcchHHHHHHHhhcccCCCchHHHHHHHcCCHHHHHHHHHcC
Q 041785 102 HLAAKYSHFDIVRVLIERAQLAQHGDEEPESGIEAFRQMIRMVNNEKNTALHEAVSHGNVEVVKILTRED 171 (181)
Q Consensus 102 ~~a~~~~~~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~t~l~~A~~~~~~~~~~~Ll~~g 171 (181)
|+|+..++.+++++|++.|+++ +.+|..|.||||+|+..|+.+++++|+++|
T Consensus 85 ~~A~~~~~~~~v~~Ll~~g~~~------------------~~~~~~g~tpl~~A~~~~~~~~~~~Ll~~G 136 (136)
T 2jab_A 85 HLAAFIGHLEIAEVLLKHGADV------------------NAQDKFGKTAFDISIGNGNEDLAEILQKLN 136 (136)
T ss_dssp HHHHHHTCHHHHHHHHHTTCCT------------------TCCCTTSCCHHHHHHHTTCHHHHHHHHHC-
T ss_pred HHHHHcCCHHHHHHHHHcCCCC------------------cCcCCCCCCHHHHHHHCCCHHHHHHHHHcC
Confidence 9999999999999999999887 889999999999999999999999999886
No 10
>2y1l_E Darpin-8.4; hydrolase-inhibitor complex, DEVD darpin, ankyrin repeat Pro ribosome display, apoptosis; 1.80A {Synthetic source} PDB: 3noc_D* 4dx5_D* 2j8s_D* 4dx6_D* 4dx7_D* 3nog_D* 1mj0_A 1svx_A 2qyj_A 2bkg_A 2p2c_P 2bkk_B* 2v5q_C 2xee_A 2xeh_A 3q9n_C* 3q9u_C*
Probab=99.96 E-value=1.9e-28 Score=165.14 Aligned_cols=133 Identities=24% Similarity=0.302 Sum_probs=118.7
Q ss_pred cCCCHHHHHHHHcCCcHHHHHHHHHhcccccccCCCCchhHHHHhhhhhhhhHHHHHHHHHhhccccccccccCCCcHHH
Q 041785 23 SQMDPNLFKAAADGSVEPFKDMAREVIESSLTVHTKNTILHINIICQETENASTKFVEEILEICPALLLQVNAKGDTPLH 102 (181)
Q Consensus 23 ~~~~t~l~~a~~~g~~~~~~~ll~~~~~~~~~~~~g~t~Lh~a~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~g~t~L~ 102 (181)
..+.++|+.|+..|+.+++++|++.|++++..+..|.||||+| +..++.+++++|++. +.+++.++..|.||||
T Consensus 12 ~~~~~~l~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A--~~~~~~~~v~~Ll~~----g~~~~~~~~~g~t~L~ 85 (169)
T 2y1l_E 12 SDLGKKLLEAARAGRDDEVRILMANGADVNAEDASGWTPLHLA--AFNGHLEIVEVLLKN----GADVNAVDHAGMTPLR 85 (169)
T ss_dssp -CHHHHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHH--HHTTCHHHHHHHHHT----TCCTTCCCTTSCCHHH
T ss_pred CcccchHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCCHHHHH--HHcCCHHHHHHHHHc----CCCCCccCCCCCCHHH
Confidence 3456889999999999999999999988888888999999999 999999999999886 8888999999999999
Q ss_pred HHHHcCCHHHHHHHHHhhhhccCCCCCCcchHHHHHHHhhcccCCCchHHHHHHHcCCHHHHHHHHHcCCCCCCCcC
Q 041785 103 LAAKYSHFDIVRVLIERAQLAQHGDEEPESGIEAFRQMIRMVNNEKNTALHEAVSHGNVEVVKILTREDPDYPYSAN 179 (181)
Q Consensus 103 ~a~~~~~~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~t~l~~A~~~~~~~~~~~Ll~~g~~~~~~~~ 179 (181)
+|+..++.+++++|++.|+++ +.+|..|.||||+|+..|+.+++++|+++|++++..+.
T Consensus 86 ~A~~~~~~~~~~~Ll~~g~~~------------------~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~ 144 (169)
T 2y1l_E 86 LAALFGHLEIVEVLLKNGADV------------------NANDMEGHTPLHLAAMFGHLEIVEVLLKNGADVNAQDK 144 (169)
T ss_dssp HHHHTTCHHHHHHHHHTTCCT------------------TCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCT
T ss_pred HHHHcCCHHHHHHHHHcCCCC------------------CCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCcCC
Confidence 999999999999999998887 78888899999999999999999999999999877654
No 11
>1ihb_A P18-INK4C(INK6), cyclin-dependent kinase 6 inhibitor; cell cycle inhibitor, ankyrin repeat, CDK 4/6 inhibitor; 1.95A {Homo sapiens} SCOP: d.211.1.1 PDB: 1bu9_A 1g3n_B 1mx4_A 1mx2_A 1mx6_A
Probab=99.96 E-value=1.3e-28 Score=164.55 Aligned_cols=128 Identities=21% Similarity=0.208 Sum_probs=109.0
Q ss_pred ccCCCHHHHHHHHcCCcHHHHHHHHHhcccccccCCCCchhHHHHhhhhhhhhHHHHHHHHHhhccccccccccCCCcHH
Q 041785 22 QSQMDPNLFKAAADGSVEPFKDMAREVIESSLTVHTKNTILHINIICQETENASTKFVEEILEICPALLLQVNAKGDTPL 101 (181)
Q Consensus 22 ~~~~~t~l~~a~~~g~~~~~~~ll~~~~~~~~~~~~g~t~Lh~a~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~g~t~L 101 (181)
...|.||||+|+. |+.+++++|++.|++++.++..|.||||+| +..++.+++++|++. +.+++.++..|.|||
T Consensus 35 ~~~g~t~L~~A~~-~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A--~~~~~~~~v~~Ll~~----g~~~~~~~~~g~t~L 107 (162)
T 1ihb_A 35 NGFGRTALQVMKL-GNPEIARRLLLRGANPDLKDRTGFAVIHDA--ARAGFLDTLQTLLEF----QADVNIEDNEGNLPL 107 (162)
T ss_dssp CTTSCCHHHHCCS-SCHHHHHHHHHTTCCTTCCCTTSCCHHHHH--HHHTCHHHHHHHHHT----TCCTTCCCTTSCCHH
T ss_pred CccCccHHHHHHc-CcHHHHHHHHHcCCCCCCCCCCCCCHHHHH--HHcCCHHHHHHHHHc----CCCCCCcCCCCCCHH
Confidence 4567888888888 888899988888888888888888999988 888888888888886 888888888888999
Q ss_pred HHHHHcCCHHHHHHHHHhhhhccCCCCCCcchHHHHHHHhhcccCCCchHHHHHHHcCCHHHHHHHHHcCCC
Q 041785 102 HLAAKYSHFDIVRVLIERAQLAQHGDEEPESGIEAFRQMIRMVNNEKNTALHEAVSHGNVEVVKILTREDPD 173 (181)
Q Consensus 102 ~~a~~~~~~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~t~l~~A~~~~~~~~~~~Ll~~g~~ 173 (181)
|+|+..++.+++++|++.|++. ++.++..|.||||+|+..|+.+++++|+++|||
T Consensus 108 ~~A~~~~~~~~v~~Ll~~g~~~-----------------~~~~~~~g~t~l~~A~~~~~~~~~~~Ll~~GAd 162 (162)
T 1ihb_A 108 HLAAKEGHLRVVEFLVKHTASN-----------------VGHRNHKGDTACDLARLYGRNEVVSLMQANGAG 162 (162)
T ss_dssp HHHHHTTCHHHHHHHHHHSCCC-----------------TTCCCTTSCCHHHHHHHTTCHHHHHHHHHTC--
T ss_pred HHHHHcCCHHHHHHHHHccCCC-----------------CCCcCCCCCcHHHHHHHcCCHHHHHHHHHhCCC
Confidence 9999888989999998888764 377888899999999999999999999999885
No 12
>1awc_B Protein (GA binding protein beta 1); complex (transcription regulation/DNA), DNA-binding, nuclear protein, ETS domain, ankyrin repeats; HET: DNA BRU CBR; 2.15A {Mus musculus} SCOP: d.211.1.1
Probab=99.96 E-value=2.8e-28 Score=161.79 Aligned_cols=129 Identities=25% Similarity=0.242 Sum_probs=109.0
Q ss_pred CHHHHHHHHcCCcHHHHHHHHHhcccccccCCCCchhHHHHhhhhhhhhHHHHHHHHHhhccccccccccCCCcHHHHHH
Q 041785 26 DPNLFKAAADGSVEPFKDMAREVIESSLTVHTKNTILHINIICQETENASTKFVEEILEICPALLLQVNAKGDTPLHLAA 105 (181)
Q Consensus 26 ~t~l~~a~~~g~~~~~~~ll~~~~~~~~~~~~g~t~Lh~a~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~g~t~L~~a~ 105 (181)
.++|+.|+..|+.+++++|++.|.+.. .+..|.||||+| +..++.+++++|++. +.+++.++..|.||||+|+
T Consensus 3 ~~~L~~A~~~g~~~~v~~Ll~~g~~~~-~~~~g~t~L~~A--~~~~~~~~v~~Ll~~----g~~~~~~~~~g~t~L~~A~ 75 (153)
T 1awc_B 3 GKKLLEAARAGQDDEVRILMANGAPFT-TDWLGTSPLHLA--AQYGHFSTTEVLLRA----GVSRDARTKVDRTPLHMAA 75 (153)
T ss_dssp HHHHHHHHHHTCHHHHHHHHHHTCCCC-CCTTCCCHHHHH--HHHTCHHHHHHHHTT----TCCTTCCCTTCCCHHHHHH
T ss_pred cHHHHHHHHcCCHHHHHHHHHcCCCCC-cCCCCCCHHHHH--HHcCCHHHHHHHHHc----CCCCCCCCCCCCCHHHHHH
Confidence 578888888888888888888887654 477788888888 888888888888876 7888888888888888888
Q ss_pred HcCCHHHHHHHHHhhhhccCCCCCCcchHHHHHHHhhcccCCCchHHHHHHHcCCHHHHHHHHHcCCCCCCCcC
Q 041785 106 KYSHFDIVRVLIERAQLAQHGDEEPESGIEAFRQMIRMVNNEKNTALHEAVSHGNVEVVKILTREDPDYPYSAN 179 (181)
Q Consensus 106 ~~~~~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~t~l~~A~~~~~~~~~~~Ll~~g~~~~~~~~ 179 (181)
..++.+++++|++.|+++ +.+|..|+||||+|+..|+.+++++|+++|++++..+.
T Consensus 76 ~~~~~~~v~~Ll~~g~~~------------------~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~~~ 131 (153)
T 1awc_B 76 SEGHANIVEVLLKHGADV------------------NAKDMLKMTALHWATEHNHQEVVELLIKYGADVHTQSK 131 (153)
T ss_dssp HHTCHHHHHHHHTTTCCT------------------TCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCT
T ss_pred HcChHHHHHHHHHcCCCC------------------CCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCccccCC
Confidence 888888888888888877 77888888888888888888888888888888877654
No 13
>3v30_A DNA-binding protein rfxank; structural genomics consortium, SGC, rfxank, ANK repeat, Pro binding; 1.57A {Homo sapiens} PDB: 3uxg_A
Probab=99.96 E-value=3.9e-28 Score=163.90 Aligned_cols=134 Identities=16% Similarity=0.125 Sum_probs=116.0
Q ss_pred hcccCCCHHHHHHHHcCCcHHHHHHHHHhcccccccCCCCchhHHHHhhhhhhhhHHHHHHHHHhhccccccccccCCCc
Q 041785 20 IKQSQMDPNLFKAAADGSVEPFKDMAREVIESSLTVHTKNTILHINIICQETENASTKFVEEILEICPALLLQVNAKGDT 99 (181)
Q Consensus 20 ~~~~~~~t~l~~a~~~g~~~~~~~ll~~~~~~~~~~~~g~t~Lh~a~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~g~t 99 (181)
.....|.||||+|+..|+.+++++|++.|++++..+..|.||||+| +..++.+++++|++. +.+++.++..|.|
T Consensus 31 ~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A--~~~~~~~~v~~Ll~~----g~~~~~~~~~g~t 104 (172)
T 3v30_A 31 KPDERGFTPLIWASAFGEIETVRFLLEWGADPHILAKERESALSLA--STGGYTDIVGLLLER----DVDINIYDWNGGT 104 (172)
T ss_dssp CCCTTSCCHHHHHHHTTCHHHHHHHHHHTCCTTCCCTTCCCHHHHH--HHTTCHHHHHHHHTT----TCCTTCCCTTSCC
T ss_pred CCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCchhhcccCCCHHHHH--HHCCCHHHHHHHHHc----CCCCCCCCCCCCC
Confidence 3355788999999999999999999998888888888899999999 888899999888886 8888888888999
Q ss_pred HHHHHHHcCCHHHHHHHHHhhhhccCCCCCCcchHHHHHHHhhcccCCCchHHHHHHHcCCHHHHHHHHHcCCCCCCC
Q 041785 100 PLHLAAKYSHFDIVRVLIERAQLAQHGDEEPESGIEAFRQMIRMVNNEKNTALHEAVSHGNVEVVKILTREDPDYPYS 177 (181)
Q Consensus 100 ~L~~a~~~~~~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~t~l~~A~~~~~~~~~~~Ll~~g~~~~~~ 177 (181)
|||+|+..++.+++++|++.|+++ +.+|..|.||||+|+..|+.+++++|+++|+++...
T Consensus 105 ~L~~A~~~~~~~~v~~Ll~~ga~~------------------~~~~~~g~t~l~~A~~~~~~~~~~~L~~~~~~~~~~ 164 (172)
T 3v30_A 105 PLLYAVRGNHVKCVEALLARGADL------------------TTEADSGYTPMDLAVALGYRKVQQVIENHILKLFQS 164 (172)
T ss_dssp HHHHHHHTTCHHHHHHHHHTTCCT------------------TCCCTTSCCHHHHHHHHTCHHHHHHHHHHHHHHSCC
T ss_pred HHHHHHHcCCHHHHHHHHHcCCCc------------------cccCCCCCCHHHHHHHhCcHHHHHHHHHHHHHHhcc
Confidence 999999999999999999988887 788888999999999999999999999888876544
No 14
>3v30_A DNA-binding protein rfxank; structural genomics consortium, SGC, rfxank, ANK repeat, Pro binding; 1.57A {Homo sapiens} PDB: 3uxg_A
Probab=99.96 E-value=1.2e-28 Score=166.40 Aligned_cols=131 Identities=22% Similarity=0.175 Sum_probs=122.1
Q ss_pred CCHHHHHHHHcCCcHHHHHHHHHhcc-cccccCCCCchhHHHHhhhhhhhhHHHHHHHHHhhccccccccccCCCcHHHH
Q 041785 25 MDPNLFKAAADGSVEPFKDMAREVIE-SSLTVHTKNTILHINIICQETENASTKFVEEILEICPALLLQVNAKGDTPLHL 103 (181)
Q Consensus 25 ~~t~l~~a~~~g~~~~~~~ll~~~~~-~~~~~~~g~t~Lh~a~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~g~t~L~~ 103 (181)
+.+|||.|+..|+.+.++.|++.+.. .+..+..|.||||+| +..++.+++++|++. +.+++.++..|.||||+
T Consensus 2 ~~~~L~~A~~~g~~~~v~~ll~~~~~~~~~~~~~g~t~L~~A--~~~~~~~~v~~Ll~~----g~~~~~~~~~g~t~L~~ 75 (172)
T 3v30_A 2 DSLSIHQLAAQGELDQLKEHLRKGDNLVNKPDERGFTPLIWA--SAFGEIETVRFLLEW----GADPHILAKERESALSL 75 (172)
T ss_dssp --CCHHHHHHTTCHHHHHHHHTTCSGGGGCCCTTSCCHHHHH--HHTTCHHHHHHHHHH----TCCTTCCCTTCCCHHHH
T ss_pred chhhHHHHHHcCCHHHHHHHHHcCcccccCCCCCCCCHHHHH--HHcCCHHHHHHHHHc----CCCchhhcccCCCHHHH
Confidence 46899999999999999999998876 567889999999999 999999999999997 99999999999999999
Q ss_pred HHHcCCHHHHHHHHHhhhhccCCCCCCcchHHHHHHHhhcccCCCchHHHHHHHcCCHHHHHHHHHcCCCCCCCcC
Q 041785 104 AAKYSHFDIVRVLIERAQLAQHGDEEPESGIEAFRQMIRMVNNEKNTALHEAVSHGNVEVVKILTREDPDYPYSAN 179 (181)
Q Consensus 104 a~~~~~~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~t~l~~A~~~~~~~~~~~Ll~~g~~~~~~~~ 179 (181)
|+..++.+++++|++.|+++ +.+|..|+||||+|+..|+.+++++|+++|++++..+.
T Consensus 76 A~~~~~~~~v~~Ll~~g~~~------------------~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~~~ 133 (172)
T 3v30_A 76 ASTGGYTDIVGLLLERDVDI------------------NIYDWNGGTPLLYAVRGNHVKCVEALLARGADLTTEAD 133 (172)
T ss_dssp HHHTTCHHHHHHHHTTTCCT------------------TCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCT
T ss_pred HHHCCCHHHHHHHHHcCCCC------------------CCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCccccCC
Confidence 99999999999999999888 88999999999999999999999999999999988764
No 15
>3twr_A Tankyrase-2; ankyrin repeat, protein-protein interaction, substrate recru poly(ADP-ribosyl)ation; HET: PE8; 1.55A {Homo sapiens} SCOP: d.211.1.0 PDB: 3tws_A* 3twt_A* 3twv_A* 3tww_A 3twx_A 3twq_A 3twu_A 2y0i_S*
Probab=99.95 E-value=4.8e-28 Score=162.45 Aligned_cols=132 Identities=23% Similarity=0.354 Sum_probs=89.1
Q ss_pred CCCHHHHHHHHcCCcHHHHHHHHH-hcccccccCCCCchhHHHHhhhhhhhhHHHHHHHHHhhccccccccccCCCcHHH
Q 041785 24 QMDPNLFKAAADGSVEPFKDMARE-VIESSLTVHTKNTILHINIICQETENASTKFVEEILEICPALLLQVNAKGDTPLH 102 (181)
Q Consensus 24 ~~~t~l~~a~~~g~~~~~~~ll~~-~~~~~~~~~~g~t~Lh~a~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~g~t~L~ 102 (181)
.+.++||.|+..|+.++++.|++. +.+....+..|.||||+| +..++.+++++|++. +.+++.++..|+||||
T Consensus 7 ~~~~~l~~A~~~g~~~~v~~ll~~~~~~~~~~~~~g~t~L~~A--~~~~~~~~v~~Ll~~----g~~~~~~~~~g~t~L~ 80 (165)
T 3twr_A 7 EADRQLLEAAKAGDVETVKKLCTVQSVNCRDIEGRQSTPLHFA--AGYNRVSVVEYLLQH----GADVHAKDKGGLVPLH 80 (165)
T ss_dssp HHHHHHHHHHHHTCHHHHHHHCCTTTTTCCCTTTTCCCHHHHH--HHTTCHHHHHHHHHT----TCCTTCCCTTSCCHHH
T ss_pred hhhHHHHHHHHhCCHHHHHHHHHcCCCCccccccCCCCHHHHH--HHcChHHHHHHHHhc----CCCCCccCCCCCCHHH
Confidence 455677777777777777777663 333334555666777777 677777777777665 6666667777777777
Q ss_pred HHHHcCCHHHHHHHHHhhhhccCCCCCCcchHHHHHHHhhcccCCCchHHHHHHHcCCHHHHHHHHHcCCCCCCCcC
Q 041785 103 LAAKYSHFDIVRVLIERAQLAQHGDEEPESGIEAFRQMIRMVNNEKNTALHEAVSHGNVEVVKILTREDPDYPYSAN 179 (181)
Q Consensus 103 ~a~~~~~~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~t~l~~A~~~~~~~~~~~Ll~~g~~~~~~~~ 179 (181)
+|+..++.+++++|++.|+++ +.+|..|+||||+|+..|+.+++++|+++|++++.++.
T Consensus 81 ~A~~~~~~~~v~~Ll~~g~~~------------------~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~~~ 139 (165)
T 3twr_A 81 NACSYGHYEVAELLVKHGAVV------------------NVADLWKFTPLHEAAAKGKYEICKLLLQHGADPTKKNR 139 (165)
T ss_dssp HHHHTTCHHHHHHHHHTTCCT------------------TCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCT
T ss_pred HHHHcCcHHHHHHHHhCCCCC------------------CCcCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCcccCC
Confidence 777777777777777776665 66666777777777777777777777777777665543
No 16
>3hra_A Ankyrin repeat family protein; structural protein; 1.69A {Enterococcus faecalis}
Probab=99.95 E-value=2.2e-27 Score=163.77 Aligned_cols=135 Identities=21% Similarity=0.202 Sum_probs=123.4
Q ss_pred ccCCCHHHHHHHHcCCcHHHHHHHHHhcccccccCCCCchhHHHHhhhhhhhhHHHHHHHHHhhccccccccccCCCcHH
Q 041785 22 QSQMDPNLFKAAADGSVEPFKDMAREVIESSLTVHTKNTILHINIICQETENASTKFVEEILEICPALLLQVNAKGDTPL 101 (181)
Q Consensus 22 ~~~~~t~l~~a~~~g~~~~~~~ll~~~~~~~~~~~~g~t~Lh~a~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~g~t~L 101 (181)
...|.||||+|+..|+.+++++|++.|++++..+..|.||||+| +..++.+++++|++. .+.+++..+..|.|||
T Consensus 36 ~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~l~~A--~~~~~~~~~~~Ll~~---~~~~~~~~~~~g~t~L 110 (201)
T 3hra_A 36 DTEGNTPLNIAVHNNDIEIAKALIDRGADINLQNSISDSPYLYA--GAQGRTEILAYMLKH---ATPDLNKHNRYGGNAL 110 (201)
T ss_dssp CTTSCCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHH--HHTTCHHHHHHHHHH---SCCCTTCCCTTSCCSH
T ss_pred CCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCHHHHH--HHcCCHHHHHHHHhc---cCcccccccCCCCcHH
Confidence 45789999999999999999999999999988899999999999 999999999999966 4778999999999999
Q ss_pred HHHHHcCCHHHHHHHHHhh-hhccCCCCCCcchHHHHHHHhhcccCCCchHHHHHHHcCC-----HHHHHHHHHcCCCCC
Q 041785 102 HLAAKYSHFDIVRVLIERA-QLAQHGDEEPESGIEAFRQMIRMVNNEKNTALHEAVSHGN-----VEVVKILTREDPDYP 175 (181)
Q Consensus 102 ~~a~~~~~~~~~~~L~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~g~t~l~~A~~~~~-----~~~~~~Ll~~g~~~~ 175 (181)
|+|+..++.+++++|++.+ .++ +.+|..|+||||+|+..++ .+++++|+++|++++
T Consensus 111 ~~A~~~~~~~~v~~Ll~~g~~~~------------------~~~~~~g~t~L~~A~~~~~~~~~~~~~v~~Ll~~ga~~~ 172 (201)
T 3hra_A 111 IPAAEKGHIDNVKLLLEDGREDI------------------DFQNDFGYTALIEAVGLREGNQLYQDIVKLLMENGADQS 172 (201)
T ss_dssp HHHHHTTCHHHHHHHHHHCCCCT------------------TCCCTTSCCHHHHHHHSSCCSHHHHHHHHHHHHTTCCTT
T ss_pred HHHHHcCCHHHHHHHHHcCCCCc------------------CCCCCCCCCHHHHHHHhccchhhHHHHHHHHHHCCCCCC
Confidence 9999999999999999998 666 7889999999999999887 899999999999998
Q ss_pred CCcC
Q 041785 176 YSAN 179 (181)
Q Consensus 176 ~~~~ 179 (181)
..+.
T Consensus 173 ~~~~ 176 (201)
T 3hra_A 173 IKDN 176 (201)
T ss_dssp CCCT
T ss_pred ccCC
Confidence 8764
No 17
>2y1l_E Darpin-8.4; hydrolase-inhibitor complex, DEVD darpin, ankyrin repeat Pro ribosome display, apoptosis; 1.80A {Synthetic source} PDB: 3noc_D* 4dx5_D* 2j8s_D* 4dx6_D* 4dx7_D* 3nog_D* 1mj0_A 1svx_A 2qyj_A 2bkg_A 2p2c_P 2bkk_B* 2v5q_C 2xee_A 2xeh_A 3q9n_C* 3q9u_C*
Probab=99.95 E-value=1.6e-27 Score=160.65 Aligned_cols=127 Identities=22% Similarity=0.265 Sum_probs=119.9
Q ss_pred cccCCCHHHHHHHHcCCcHHHHHHHHHhcccccccCCCCchhHHHHhhhhhhhhHHHHHHHHHhhccccccccccCCCcH
Q 041785 21 KQSQMDPNLFKAAADGSVEPFKDMAREVIESSLTVHTKNTILHINIICQETENASTKFVEEILEICPALLLQVNAKGDTP 100 (181)
Q Consensus 21 ~~~~~~t~l~~a~~~g~~~~~~~ll~~~~~~~~~~~~g~t~Lh~a~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~g~t~ 100 (181)
....|.||||+|+..|+.+++++|++.|.+.+..+..|.||||+| +..++.+++++|++. +++++.++..|.||
T Consensus 43 ~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A--~~~~~~~~~~~Ll~~----g~~~~~~~~~g~t~ 116 (169)
T 2y1l_E 43 EDASGWTPLHLAAFNGHLEIVEVLLKNGADVNAVDHAGMTPLRLA--ALFGHLEIVEVLLKN----GADVNANDMEGHTP 116 (169)
T ss_dssp CCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHH--HHTTCHHHHHHHHHT----TCCTTCCCTTSCCH
T ss_pred CCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCccCCCCCCHHHHH--HHcCCHHHHHHHHHc----CCCCCCCCCCCCCH
Confidence 345789999999999999999999999999988899999999999 999999999999997 99999999999999
Q ss_pred HHHHHHcCCHHHHHHHHHhhhhccCCCCCCcchHHHHHHHhhcccCCCchHHHHHHHcCCHHHHHHHHHcC
Q 041785 101 LHLAAKYSHFDIVRVLIERAQLAQHGDEEPESGIEAFRQMIRMVNNEKNTALHEAVSHGNVEVVKILTRED 171 (181)
Q Consensus 101 L~~a~~~~~~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~t~l~~A~~~~~~~~~~~Ll~~g 171 (181)
||+|+..++.+++++|++.|+++ +.+|..|.||+++|+..|+.+++++|++.|
T Consensus 117 L~~A~~~~~~~~v~~Ll~~g~~~------------------~~~~~~g~t~l~~A~~~~~~~~~~~L~~~G 169 (169)
T 2y1l_E 117 LHLAAMFGHLEIVEVLLKNGADV------------------NAQDKFGKTAFDISIDNGNEDLAEILQKLN 169 (169)
T ss_dssp HHHHHHTTCHHHHHHHHHTTCCT------------------TCCCTTSCCHHHHHHHTTCHHHHHHHHTC-
T ss_pred HHHHHHcCCHHHHHHHHHcCCCC------------------CCcCCCCCCHHHHHHHhCCHHHHHHHHHcC
Confidence 99999999999999999999988 889999999999999999999999999876
No 18
>3f6q_A Integrin-linked protein kinase; ILK, integrin-linked kinase, pinch, ankyrin repeat, ANK, IPP; 1.60A {Homo sapiens} PDB: 3ixe_A 2kbx_A
Probab=99.95 E-value=1.4e-27 Score=162.27 Aligned_cols=132 Identities=14% Similarity=0.124 Sum_probs=98.9
Q ss_pred ccCCCHHHHHHHHcCCcHHHHHHHHHhcccccccCCCCchhHHHHhhhhhhhhHHHHHHHHHhhccccccccccCCCcHH
Q 041785 22 QSQMDPNLFKAAADGSVEPFKDMAREVIESSLTVHTKNTILHINIICQETENASTKFVEEILEICPALLLQVNAKGDTPL 101 (181)
Q Consensus 22 ~~~~~t~l~~a~~~g~~~~~~~ll~~~~~~~~~~~~g~t~Lh~a~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~g~t~L 101 (181)
...|.||||+|+..|+.+++++|++.|++++..+..|.||||+| +..++.+++++|++. +++++.++..|.|||
T Consensus 36 ~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A--~~~~~~~~v~~Ll~~----g~~~~~~d~~g~t~L 109 (179)
T 3f6q_A 36 DDHGFSPLHWACREGRSAVVEMLIMRGARINVMNRGDDTPLHLA--ASHGHRDIVQKLLQY----KADINAVNEHGNVPL 109 (179)
T ss_dssp CTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTCCCHHHHH--HHTTCHHHHHHHHHT----TCCTTCCCTTSCCHH
T ss_pred CCCCCCHHHHHHHcCcHHHHHHHHHcCCCCCCcCCCCCCHHHHH--HHcCCHHHHHHHHHc----CCCCCccCCCCCCHH
Confidence 44567777777777777777777777777776777777777777 777777777777775 777777777777777
Q ss_pred HHHHHcCCHHHHHHHHHhhhhccCCCCCCcchHHHHHHHhhcccCCCchHHHHHHHcCCHHHHHHHHHcCCCCCCC
Q 041785 102 HLAAKYSHFDIVRVLIERAQLAQHGDEEPESGIEAFRQMIRMVNNEKNTALHEAVSHGNVEVVKILTREDPDYPYS 177 (181)
Q Consensus 102 ~~a~~~~~~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~t~l~~A~~~~~~~~~~~Ll~~g~~~~~~ 177 (181)
|+|+..++.+++++|++.|+++ +.+|..|.||+++|+..++.+++++|+++|++++..
T Consensus 110 ~~A~~~~~~~~v~~Ll~~ga~~------------------~~~~~~g~tpl~~A~~~~~~~~~~~L~~~g~~~~~~ 167 (179)
T 3f6q_A 110 HYACFWGQDQVAEDLVANGALV------------------SICNKYGEMPVDKAKAPLRELLRERAEKMGQNLNRI 167 (179)
T ss_dssp HHHHHTTCHHHHHHHHHTTCCS------------------SBCCTTSCCGGGGSCHHHHHHHHHHHHHTTCCCSCB
T ss_pred HHHHHcCCHHHHHHHHHCCCCc------------------chhccCCCCcHHHHHHHHHHHHHHHHHHhhcCcccC
Confidence 7777777777777777777776 677777777777777777777777777777777654
No 19
>3f6q_A Integrin-linked protein kinase; ILK, integrin-linked kinase, pinch, ankyrin repeat, ANK, IPP; 1.60A {Homo sapiens} PDB: 3ixe_A 2kbx_A
Probab=99.95 E-value=3.9e-28 Score=165.06 Aligned_cols=133 Identities=23% Similarity=0.252 Sum_probs=121.8
Q ss_pred cCCCHHHHHHHHcCCcHHHHHHHHH-hcccccccCCCCchhHHHHhhhhhhhhHHHHHHHHHhhccccccccccCCCcHH
Q 041785 23 SQMDPNLFKAAADGSVEPFKDMARE-VIESSLTVHTKNTILHINIICQETENASTKFVEEILEICPALLLQVNAKGDTPL 101 (181)
Q Consensus 23 ~~~~t~l~~a~~~g~~~~~~~ll~~-~~~~~~~~~~g~t~Lh~a~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~g~t~L 101 (181)
+++.++|+.|+..|+.+.+++|++. +.+.+..+..|.||||+| +..++.+++++|++. +++++.++..|.|||
T Consensus 3 ~~~~~~l~~A~~~g~~~~v~~ll~~~~~~~~~~~~~g~t~L~~A--~~~~~~~~v~~Ll~~----g~~~~~~~~~g~t~L 76 (179)
T 3f6q_A 3 PEFMDDIFTQCREGNAVAVRLWLDNTENDLNQGDDHGFSPLHWA--CREGRSAVVEMLIMR----GARINVMNRGDDTPL 76 (179)
T ss_dssp ----CCHHHHHHHTCHHHHHHHHHCTTSCTTCCCTTSCCHHHHH--HHTTCHHHHHHHHHT----TCCTTCCCTTCCCHH
T ss_pred HHHHHHHHHHHHcCCHHHHHHHHhcCcccccccCCCCCCHHHHH--HHcCcHHHHHHHHHc----CCCCCCcCCCCCCHH
Confidence 3567899999999999999999997 556667899999999999 999999999999997 999999999999999
Q ss_pred HHHHHcCCHHHHHHHHHhhhhccCCCCCCcchHHHHHHHhhcccCCCchHHHHHHHcCCHHHHHHHHHcCCCCCCCcC
Q 041785 102 HLAAKYSHFDIVRVLIERAQLAQHGDEEPESGIEAFRQMIRMVNNEKNTALHEAVSHGNVEVVKILTREDPDYPYSAN 179 (181)
Q Consensus 102 ~~a~~~~~~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~t~l~~A~~~~~~~~~~~Ll~~g~~~~~~~~ 179 (181)
|+|+..++.+++++|++.|+++ +.+|..|.||||+|+..|+.+++++|+++|++++..+.
T Consensus 77 ~~A~~~~~~~~v~~Ll~~g~~~------------------~~~d~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~~~ 136 (179)
T 3f6q_A 77 HLAASHGHRDIVQKLLQYKADI------------------NAVNEHGNVPLHYACFWGQDQVAEDLVANGALVSICNK 136 (179)
T ss_dssp HHHHHTTCHHHHHHHHHTTCCT------------------TCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCSSBCCT
T ss_pred HHHHHcCCHHHHHHHHHcCCCC------------------CccCCCCCCHHHHHHHcCCHHHHHHHHHCCCCcchhcc
Confidence 9999999999999999999988 88999999999999999999999999999999988764
No 20
>1ihb_A P18-INK4C(INK6), cyclin-dependent kinase 6 inhibitor; cell cycle inhibitor, ankyrin repeat, CDK 4/6 inhibitor; 1.95A {Homo sapiens} SCOP: d.211.1.1 PDB: 1bu9_A 1g3n_B 1mx4_A 1mx2_A 1mx6_A
Probab=99.95 E-value=8.2e-28 Score=160.70 Aligned_cols=131 Identities=20% Similarity=0.189 Sum_probs=122.0
Q ss_pred CCCHHHHHHHHcCCcHHHHHHHHHhcccccccCCCCchhHHHHhhhhhhhhHHHHHHHHHhhccccccccccCCCcHHHH
Q 041785 24 QMDPNLFKAAADGSVEPFKDMAREVIESSLTVHTKNTILHINIICQETENASTKFVEEILEICPALLLQVNAKGDTPLHL 103 (181)
Q Consensus 24 ~~~t~l~~a~~~g~~~~~~~ll~~~~~~~~~~~~g~t~Lh~a~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~g~t~L~~ 103 (181)
...||||.|+..|+.+++++|++.|++++..+..|.||||+| +. ++.+++++|++. +.+++.++..|.||||+
T Consensus 4 ~~~~~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~g~t~L~~A--~~-~~~~~v~~Ll~~----g~~~~~~~~~g~t~L~~ 76 (162)
T 1ihb_A 4 PWGNELASAAARGDLEQLTSLLQNNVNVNAQNGFGRTALQVM--KL-GNPEIARRLLLR----GANPDLKDRTGFAVIHD 76 (162)
T ss_dssp -CHHHHHHHHHHTCHHHHHHHTTSCCCTTCCCTTSCCHHHHC--CS-SCHHHHHHHHHT----TCCTTCCCTTSCCHHHH
T ss_pred hHhhHHHHHHHcCCHHHHHHHHhCCCCccccCccCccHHHHH--Hc-CcHHHHHHHHHc----CCCCCCCCCCCCCHHHH
Confidence 456899999999999999999999999988899999999999 88 999999999997 89999999999999999
Q ss_pred HHHcCCHHHHHHHHHhhhhccCCCCCCcchHHHHHHHhhcccCCCchHHHHHHHcCCHHHHHHHHHcCCC-CCCCcC
Q 041785 104 AAKYSHFDIVRVLIERAQLAQHGDEEPESGIEAFRQMIRMVNNEKNTALHEAVSHGNVEVVKILTREDPD-YPYSAN 179 (181)
Q Consensus 104 a~~~~~~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~t~l~~A~~~~~~~~~~~Ll~~g~~-~~~~~~ 179 (181)
|+..++.+++++|++.|+++ +.+|..|+||||+|+..|+.+++++|+++|++ ++..+.
T Consensus 77 A~~~~~~~~v~~Ll~~g~~~------------------~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~ 135 (162)
T 1ihb_A 77 AARAGFLDTLQTLLEFQADV------------------NIEDNEGNLPLHLAAKEGHLRVVEFLVKHTASNVGHRNH 135 (162)
T ss_dssp HHHHTCHHHHHHHHHTTCCT------------------TCCCTTSCCHHHHHHHTTCHHHHHHHHHHSCCCTTCCCT
T ss_pred HHHcCCHHHHHHHHHcCCCC------------------CCcCCCCCCHHHHHHHcCCHHHHHHHHHccCCCCCCcCC
Confidence 99999999999999999887 88999999999999999999999999999998 465543
No 21
>2rfa_A Transient receptor potential cation channel subfa member 6; TRPV6, ankyrin reapeat, ANK RE calcium channel, calcium transport, calmodulin-binding; 1.70A {Mus musculus}
Probab=99.95 E-value=2.6e-27 Score=166.96 Aligned_cols=145 Identities=19% Similarity=0.166 Sum_probs=115.0
Q ss_pred CCCHHHHHHHHcCCcHHHHHHHHH-hcccccccCCCCchhHHHHhhhhhhhhHHHHHHHHHhhccccc-----cccccCC
Q 041785 24 QMDPNLFKAAADGSVEPFKDMARE-VIESSLTVHTKNTILHINIICQETENASTKFVEEILEICPALL-----LQVNAKG 97 (181)
Q Consensus 24 ~~~t~l~~a~~~g~~~~~~~ll~~-~~~~~~~~~~g~t~Lh~a~~~~~~~~~~~~~l~~~~~~~~~~~-----~~~~~~g 97 (181)
.|.||||.|+..|+.+++++|++. |.+++.++..|.||||+| +..++.+++++|++. +.++ +..+..|
T Consensus 2 ~g~t~L~~A~~~g~~~~v~~Ll~~~g~~~~~~~~~g~t~L~~A--~~~g~~~~v~~Ll~~----~~~~~~~~~~~~~~~g 75 (232)
T 2rfa_A 2 IWESPLLLAAKENDVQALSKLLKFEGCEVHQRGAMGETALHIA--ALYDNLEAAMVLMEA----APELVFEPMTSELYEG 75 (232)
T ss_dssp CTTCHHHHHHHTTCHHHHHHHHTTTCSCTTCCCTTSCCHHHHH--HHTTCHHHHHHHHHH----CGGGGGCCCCSTTTTT
T ss_pred CCCCHHHHHHHcCCHHHHHHHHHhcCCCcccCCCCCCCHHHHH--HHcCCHHHHHHHHHc----CchhccccccccCCCC
Confidence 478999999999999999999997 888888999999999999 999999999999997 6655 5667899
Q ss_pred CcHHHHHHHcCCHHHHHHHHHhhhhccCCCCCCcchHHHHHHHhhcccCCCchHHHHHHHcCCHHHHHHHHHcCCCCCCC
Q 041785 98 DTPLHLAAKYSHFDIVRVLIERAQLAQHGDEEPESGIEAFRQMIRMVNNEKNTALHEAVSHGNVEVVKILTREDPDYPYS 177 (181)
Q Consensus 98 ~t~L~~a~~~~~~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~t~l~~A~~~~~~~~~~~Ll~~g~~~~~~ 177 (181)
.||||+|+..++.+++++|++.|+++.......... ...+..+..|+||||+|+..|+.+++++|+++|++++..
T Consensus 76 ~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~~~~~-----~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~ 150 (232)
T 2rfa_A 76 QTALHIAVINQNVNLVRALLARGASVSARATGSVFH-----YRPHNLIYYGEHPLSFAACVGSEEIVRLLIEHGADIRAQ 150 (232)
T ss_dssp CCHHHHHHHTTCHHHHHHHHHTTCCTTCCCCSGGGS-----CCTTCSCCCCSSHHHHHHHHTCHHHHHHHHHTTCCTTCC
T ss_pred cCHHHHHHHcCCHHHHHHHHhCCCCCCcccCCccee-----ecccccccCCCCHHHHHHHcCCHHHHHHHHHCCCCCCCC
Confidence 999999999999999999999998873322211000 001223346777777777777777777777777777665
Q ss_pred cC
Q 041785 178 AN 179 (181)
Q Consensus 178 ~~ 179 (181)
+.
T Consensus 151 d~ 152 (232)
T 2rfa_A 151 DS 152 (232)
T ss_dssp CT
T ss_pred CC
Confidence 43
No 22
>3aji_A 26S proteasome non-ATPase regulatory subunit 10; gankyrin, S6 ATPase, P-benzoyl-L-phenylalanine, PBPA, amber suppression; HET: PBF; 2.05A {Mus musculus} PDB: 2dvw_A 2dwz_A* 1tr4_A 1uoh_A 1qym_A
Probab=99.95 E-value=2.6e-27 Score=166.78 Aligned_cols=154 Identities=21% Similarity=0.194 Sum_probs=129.4
Q ss_pred hcccCCCHHHHHHHHcCCcHHHHHHHHHhcccccccCCCCchhHHHHhhhhhhhhHHHHHHHHHhhccccccccccCCCc
Q 041785 20 IKQSQMDPNLFKAAADGSVEPFKDMAREVIESSLTVHTKNTILHINIICQETENASTKFVEEILEICPALLLQVNAKGDT 99 (181)
Q Consensus 20 ~~~~~~~t~l~~a~~~g~~~~~~~ll~~~~~~~~~~~~g~t~Lh~a~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~g~t 99 (181)
.....|.||||+|+..|+.+++++|++.|.+++..+..|.||||+| +..++.+++++|++. +.+++.++..|.|
T Consensus 35 ~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A--~~~~~~~~v~~Ll~~----g~~~~~~~~~g~t 108 (231)
T 3aji_A 35 RTDQDSRTALHWACSAGHTEIVEFLLQLGVPVNDKDDAGWSPLHIA--ASAGXDEIVKALLVK----GAHVNAVNQNGCT 108 (231)
T ss_dssp CCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCSCCCCTTSCCHHHHH--HHHTCHHHHHHHHHT----TCCTTCCCTTSCC
T ss_pred cCCCCCCCHHHHHHHcCcHHHHHHHHHhCCCCCCcCCCCCCHHHHH--HHcCHHHHHHHHHHc----CCCCCCCCCCCCC
Confidence 3355788999999999999999999999988888888999999999 999999999999886 8888888999999
Q ss_pred HHHHHHHcCCHHHHHHHHHhhhhccCCCCCCcchHHHH---------------HHHhhcccCCCchHHHHHHHcCCHHHH
Q 041785 100 PLHLAAKYSHFDIVRVLIERAQLAQHGDEEPESGIEAF---------------RQMIRMVNNEKNTALHEAVSHGNVEVV 164 (181)
Q Consensus 100 ~L~~a~~~~~~~~~~~L~~~~~~~~~~~~~~~~~~~~~---------------~~~~~~~~~~g~t~l~~A~~~~~~~~~ 164 (181)
|||+|+..++.+++++|++.|.++...+..+....... +.+++.+|..|+||||+|+..++.+++
T Consensus 109 ~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v 188 (231)
T 3aji_A 109 PLHYAASKNRHEIAVMLLEGGANPDAKDHYDATAMHRAAAKGNLKMVHILLFYKASTNIQDTEGNTPLHLACDEERVEEA 188 (231)
T ss_dssp HHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCSCCCCTTSCCHHHHHHHTTCHHHH
T ss_pred HHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCcHHHHHHHcCCHHHHHHHHhcCCCccccCCCCCCHHHHHHHCCCHHHH
Confidence 99999999999999999999887755554444433222 134567888999999999999999999
Q ss_pred HHHHHcCCCCCCCcC
Q 041785 165 KILTREDPDYPYSAN 179 (181)
Q Consensus 165 ~~Ll~~g~~~~~~~~ 179 (181)
++|+++|++++.++.
T Consensus 189 ~~Ll~~ga~~~~~~~ 203 (231)
T 3aji_A 189 KFLVTQGASIYIENK 203 (231)
T ss_dssp HHHHHTTCCSCCCCT
T ss_pred HHHHHCCCCCCCCCC
Confidence 999999999987764
No 23
>3twr_A Tankyrase-2; ankyrin repeat, protein-protein interaction, substrate recru poly(ADP-ribosyl)ation; HET: PE8; 1.55A {Homo sapiens} SCOP: d.211.1.0 PDB: 3tws_A* 3twt_A* 3twv_A* 3tww_A 3twx_A 3twq_A 3twu_A 2y0i_S*
Probab=99.95 E-value=7.9e-28 Score=161.38 Aligned_cols=126 Identities=17% Similarity=0.206 Sum_probs=117.7
Q ss_pred ccCCCHHHHHHHHcCCcHHHHHHHHHhcccccccCCCCchhHHHHhhhhhhhhHHHHHHHHHhhccccccccccCCCcHH
Q 041785 22 QSQMDPNLFKAAADGSVEPFKDMAREVIESSLTVHTKNTILHINIICQETENASTKFVEEILEICPALLLQVNAKGDTPL 101 (181)
Q Consensus 22 ~~~~~t~l~~a~~~g~~~~~~~ll~~~~~~~~~~~~g~t~Lh~a~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~g~t~L 101 (181)
...+.||||+|+..|+.+++++|++.|++++..+..|.||||+| +..++.+++++|++. +++++.++..|.|||
T Consensus 39 ~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A--~~~~~~~~v~~Ll~~----g~~~~~~~~~g~t~L 112 (165)
T 3twr_A 39 EGRQSTPLHFAAGYNRVSVVEYLLQHGADVHAKDKGGLVPLHNA--CSYGHYEVAELLVKH----GAVVNVADLWKFTPL 112 (165)
T ss_dssp TTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHH--HHTTCHHHHHHHHHT----TCCTTCCCTTCCCHH
T ss_pred ccCCCCHHHHHHHcChHHHHHHHHhcCCCCCccCCCCCCHHHHH--HHcCcHHHHHHHHhC----CCCCCCcCCCCCCHH
Confidence 44578999999999999999999999999998999999999999 999999999999997 999999999999999
Q ss_pred HHHHHcCCHHHHHHHHHhhhhccCCCCCCcchHHHHHHHhhcccCCCchHHHHHHHcCCHHHHHHHHHcCC
Q 041785 102 HLAAKYSHFDIVRVLIERAQLAQHGDEEPESGIEAFRQMIRMVNNEKNTALHEAVSHGNVEVVKILTREDP 172 (181)
Q Consensus 102 ~~a~~~~~~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~t~l~~A~~~~~~~~~~~Ll~~g~ 172 (181)
|+|+..++.+++++|++.|+++ +.+|..|.||+++|+. ++.+++++|+++|+
T Consensus 113 ~~A~~~~~~~~v~~Ll~~ga~~------------------~~~~~~g~t~l~~a~~-~~~~i~~~L~~~gA 164 (165)
T 3twr_A 113 HEAAAKGKYEICKLLLQHGADP------------------TKKNRDGNTPLDLVKD-GDTDIQDLLRGDAA 164 (165)
T ss_dssp HHHHHTTCHHHHHHHHHTTCCT------------------TCCCTTSCCTGGGSCT-TCHHHHHHHHTC--
T ss_pred HHHHHcCCHHHHHHHHHcCCCC------------------cccCCCCCChhHhHhc-CChHHHHHHhhccc
Confidence 9999999999999999999988 8899999999999777 89999999999986
No 24
>4hbd_A KN motif and ankyrin repeat domain-containing Pro; structural genomics consortium, SGC, protein binding; 1.72A {Homo sapiens}
Probab=99.95 E-value=4.1e-27 Score=170.42 Aligned_cols=136 Identities=15% Similarity=0.207 Sum_probs=125.1
Q ss_pred hcccCCCHHHHHHHHcCCcHHHHHHHHHhc-ccccccCCCCchhHHHHhh-----hhhhhhHHHHHHHHHhhcccccccc
Q 041785 20 IKQSQMDPNLFKAAADGSVEPFKDMAREVI-ESSLTVHTKNTILHINIIC-----QETENASTKFVEEILEICPALLLQV 93 (181)
Q Consensus 20 ~~~~~~~t~l~~a~~~g~~~~~~~ll~~~~-~~~~~~~~g~t~Lh~a~~~-----~~~~~~~~~~l~~~~~~~~~~~~~~ 93 (181)
.....|.||||+|+..|+.+++++|++.|. +.+..+..|.||||+| + ..++.++++.|++. +...+..
T Consensus 106 ~~d~~g~T~Lh~A~~~g~~~~v~~Ll~~g~~~~~~~~~~g~tpL~~a--~~~~~~~~~~~~~v~~Ll~~----g~~~~~~ 179 (276)
T 4hbd_A 106 IADSNGNTALHYSVSHANFPVVQQLLDSGVCKVDKQNRAGYSPIMLT--ALATLKTQDDIETVLQLFRL----GNINAKA 179 (276)
T ss_dssp CCCTTSCCHHHHHHHTTCHHHHHHHHHTSCCCTTCCCTTSCCHHHHG--GGCCCCSHHHHHHHHHHHHH----SCTTCCC
T ss_pred CCCCCCCCHHHHHHHCCCHHHHHHHHHCCCCcCCCCCCCCCCHHHHH--HHHHhhhhhhHHHHHHHHHc----CCCcccc
Confidence 446679999999999999999999999997 7788899999999999 7 67889999999987 8888888
Q ss_pred ccCCCcHHHHHHHcCCHHHHHHHHHhhhhccCCCCCCcchHHHHHHHhhcccCCCchHHHHHHHcCCHHHHHHHHH-cCC
Q 041785 94 NAKGDTPLHLAAKYSHFDIVRVLIERAQLAQHGDEEPESGIEAFRQMIRMVNNEKNTALHEAVSHGNVEVVKILTR-EDP 172 (181)
Q Consensus 94 ~~~g~t~L~~a~~~~~~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~t~l~~A~~~~~~~~~~~Ll~-~g~ 172 (181)
+..|+||||+|+..|+.+++++|++.|+++ +.+|..|+||||+|+..|+.+++++|++ .|+
T Consensus 180 ~~~g~tpLh~A~~~g~~~~v~~Ll~~gad~------------------n~~d~~G~TpLh~A~~~g~~~iv~~Ll~~~ga 241 (276)
T 4hbd_A 180 SQAGQTALMLAVSHGRVDVVKALLACEADV------------------NVQDDDGSTALMCACEHGHKEIAGLLLAVPSC 241 (276)
T ss_dssp TTTCCCHHHHHHHTTCHHHHHHHHHTTCCT------------------TCCCTTSCCHHHHHHHHTCHHHHHHHHTSTTC
T ss_pred CCCCCCHHHHHHHcCCHHHHHHHHhCCCCC------------------CCCCCCCCCHHHHHHHCCCHHHHHHHHhcCCC
Confidence 899999999999999999999999999988 8899999999999999999999999999 899
Q ss_pred CCCCCcC
Q 041785 173 DYPYSAN 179 (181)
Q Consensus 173 ~~~~~~~ 179 (181)
+++.+++
T Consensus 242 d~~~~d~ 248 (276)
T 4hbd_A 242 DISLTDR 248 (276)
T ss_dssp CTTCCCT
T ss_pred CCcCcCC
Confidence 9988765
No 25
>3v31_A Ankyrin repeat family A protein 2; structural genomics consortium, SGC, ankra2, ANK repeat, Pro binding, HDAC4; 1.57A {Homo sapiens} PDB: 3v2x_A 3v2o_A 3so8_A
Probab=99.95 E-value=1.6e-27 Score=160.15 Aligned_cols=130 Identities=17% Similarity=0.210 Sum_probs=123.0
Q ss_pred cccCCCHHHHHHHHcCCcHHHHHHHHHhcccccccCCCCchhHHHHhhhhhhhhHHHHHHHHHhhccccccccccCCCcH
Q 041785 21 KQSQMDPNLFKAAADGSVEPFKDMAREVIESSLTVHTKNTILHINIICQETENASTKFVEEILEICPALLLQVNAKGDTP 100 (181)
Q Consensus 21 ~~~~~~t~l~~a~~~g~~~~~~~ll~~~~~~~~~~~~g~t~Lh~a~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~g~t~ 100 (181)
....|.||||+|+..|+.+++++|++.|++++..+..|.||||+| +..++.+++++|++. +.+++.++..|.||
T Consensus 32 ~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A--~~~~~~~~v~~Ll~~----g~~~~~~~~~g~t~ 105 (167)
T 3v31_A 32 TDEEGFTPLMWAAAHGQIAVVEFLLQNGADPQLLGKGRESALSLA--CSKGYTDIVKMLLDC----GVDVNEYDWNGGTP 105 (167)
T ss_dssp CCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTCCCHHHHH--HHHTCHHHHHHHHHH----TCCTTCCCTTSCCH
T ss_pred CCCCCCCHHHHHHHCCCHHHHHHHHHcCCCCCCcCCCCCcHHHHH--HHcCCHHHHHHHHHC----CCCCCcCCCCCCCH
Confidence 345789999999999999999999999999988899999999999 999999999999998 99999999999999
Q ss_pred HHHHHHcCCHHHHHHHHHhhhhccCCCCCCcchHHHHHHHhhcccCCCchHHHHHHHcCCHHHHHHHHHcCCCC
Q 041785 101 LHLAAKYSHFDIVRVLIERAQLAQHGDEEPESGIEAFRQMIRMVNNEKNTALHEAVSHGNVEVVKILTREDPDY 174 (181)
Q Consensus 101 L~~a~~~~~~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~t~l~~A~~~~~~~~~~~Ll~~g~~~ 174 (181)
||+|+..++.+++++|++.|+++ +.++..|.||+++|+..|+.+++++|+++++++
T Consensus 106 L~~A~~~~~~~~v~~Ll~~g~~~------------------~~~~~~g~t~l~~A~~~~~~~~~~~L~~~~~~~ 161 (167)
T 3v31_A 106 LLYAVHGNHVKCVKMLLESGADP------------------TIETDSGYNSMDLAVALGYRSVQQVIESHLLKL 161 (167)
T ss_dssp HHHHHHTTCHHHHHHHHHTTCCT------------------TCCCTTSCCHHHHHHHHTCHHHHHHHHHHHHHH
T ss_pred HHHHHHcCCHHHHHHHHHcCCCC------------------CCcCCCCCCHHHHHHHcCcHHHHHHHHHHHHHH
Confidence 99999999999999999999988 889999999999999999999999999987764
No 26
>2rfm_A Putative ankyrin repeat protein TV1425; ANK repeat, protein binding; HET: BU2 GOL; 1.65A {Thermoplasma volcanium}
Probab=99.95 E-value=2.7e-27 Score=162.51 Aligned_cols=126 Identities=22% Similarity=0.164 Sum_probs=120.1
Q ss_pred ccCCCHHHHHHHHcCCcHHHHHHHHHhcccccccCCCCchhHHHHhhhhhhhhHHHHHHHHHhhccccccccccCCCcHH
Q 041785 22 QSQMDPNLFKAAADGSVEPFKDMAREVIESSLTVHTKNTILHINIICQETENASTKFVEEILEICPALLLQVNAKGDTPL 101 (181)
Q Consensus 22 ~~~~~t~l~~a~~~g~~~~~~~ll~~~~~~~~~~~~g~t~Lh~a~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~g~t~L 101 (181)
...|.||||+|+..|+.+++++|++.|++++..+..|.||||+| +..++.+++++|++. +++++.++..|.|||
T Consensus 65 ~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A--~~~~~~~~v~~Ll~~----g~~~~~~~~~g~t~L 138 (192)
T 2rfm_A 65 DIEGSTALIWAVKNNRLGIAEKLLSKGSNVNTKDFSGKTPLMWS--IIFGYSEMSYFLLEH----GANVNDRNLEGETPL 138 (192)
T ss_dssp CTTSCCHHHHHHHTTCHHHHHHHHHHTCCTTCCCTTSCCHHHHH--HHHTCHHHHHHHHHT----TCCSSCCCTTCCCHH
T ss_pred cccCccHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCcHHHHH--HHcCCHHHHHHHHHC----CCCCCCCCCCCCCHH
Confidence 45689999999999999999999999999988999999999999 999999999999987 999999999999999
Q ss_pred HHHHHcCCHHHHHHHHHhhhhccCCCCCCcchHHHHHHHhhcccCCCchHHHHHHHcCCHHHHHHHHHcC
Q 041785 102 HLAAKYSHFDIVRVLIERAQLAQHGDEEPESGIEAFRQMIRMVNNEKNTALHEAVSHGNVEVVKILTRED 171 (181)
Q Consensus 102 ~~a~~~~~~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~t~l~~A~~~~~~~~~~~Ll~~g 171 (181)
|+|+..++.+++++|++.|+++ +.+|..|.||+++|+..|+.+++++|+++|
T Consensus 139 ~~A~~~~~~~~v~~Ll~~ga~~------------------~~~~~~g~t~l~~A~~~~~~~~v~~Ll~~~ 190 (192)
T 2rfm_A 139 IVASKYGRSEIVKKLLELGADI------------------SARDLTGLTAEASARIFGRQEVIKIFTEVR 190 (192)
T ss_dssp HHHHHHTCHHHHHHHHHTTCCT------------------TCBCTTSCBHHHHHHHTTCHHHHHHHHHHH
T ss_pred HHHHHcCCHHHHHHHHHCCCCC------------------CCcCCCCCCHHHHHHHhCcHHHHHHHHhcc
Confidence 9999999999999999999988 889999999999999999999999999865
No 27
>1sw6_A Regulatory protein SWI6; transcription regulation, ankyrin repeats, cell-cycle; 2.10A {Saccharomyces cerevisiae} SCOP: d.211.1.1
Probab=99.95 E-value=3.8e-27 Score=174.41 Aligned_cols=155 Identities=13% Similarity=0.111 Sum_probs=126.9
Q ss_pred cccCCCHHHHHHHHcCCcHHHHHHHHHhcccccccCCCCchhHHHHhhhhhh---hhHHHHHHHHHhhccccccccccCC
Q 041785 21 KQSQMDPNLFKAAADGSVEPFKDMAREVIESSLTVHTKNTILHINIICQETE---NASTKFVEEILEICPALLLQVNAKG 97 (181)
Q Consensus 21 ~~~~~~t~l~~a~~~g~~~~~~~ll~~~~~~~~~~~~g~t~Lh~a~~~~~~~---~~~~~~l~~~~~~~~~~~~~~~~~g 97 (181)
....|.||||+|+..|+.+++++|++.|++++.++..|.||||+| +..++ .++++.|++.+ ..+++.++..|
T Consensus 127 ~d~~g~TpLh~Aa~~g~~~~v~~Ll~~Gad~n~~d~~g~TpLh~A--~~~g~~~~~~~~~~ll~~~---~~~~~~~d~~g 201 (327)
T 1sw6_A 127 VDEHGNTPLHWLTSIANLELVKHLVKHGSNRLYGDNMGESCLVKA--VKSVNNYDSGTFEALLDYL---YPCLILEDSMN 201 (327)
T ss_dssp CSTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTBCCTTCCCHHHHH--HHSSHHHHTTCHHHHHHHH---GGGGGEECTTC
T ss_pred cCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCCHHHHH--HHhcccccHHHHHHHHHhh---hccccCCCCCC
Confidence 456799999999999999999999999999999999999999999 99888 78888888873 46789999999
Q ss_pred CcHHHHHHH----cCCHHHHHHHHHhhh--------------------hccCCCCCCcchHHH-------HHHHhhcccC
Q 041785 98 DTPLHLAAK----YSHFDIVRVLIERAQ--------------------LAQHGDEEPESGIEA-------FRQMIRMVNN 146 (181)
Q Consensus 98 ~t~L~~a~~----~~~~~~~~~L~~~~~--------------------~~~~~~~~~~~~~~~-------~~~~~~~~~~ 146 (181)
+||||+|+. .++.+++++|++.+. ++...+..+...... ...+++.+|.
T Consensus 202 ~tpLh~A~~~~~~~g~~~~v~~Ll~~~~~~~~~~~~~~i~~~~~~~g~~~~~~~~~g~t~L~~a~~~~~Ll~~~~n~~d~ 281 (327)
T 1sw6_A 202 RTILHHIIITSGMTGCSAAAKYYLDILMGWIVKKQNRPIQSGTNEKESKPNDKNGERKDSILENLDLKWIIANMLNAQDS 281 (327)
T ss_dssp CCHHHHHHHHHTSTTCHHHHHHHHHHHHHHHHHGGGCCEEEC----------------CHHHHHCSHHHHHHHTTTCCCT
T ss_pred CCHHHHHHHHccccccHHHHHHHHHHHHHHHhcccchHHHhhhhcccCCcccccccCCChhHHHHHHHHHHHhCCCCCCC
Confidence 999999999 899999999999853 222222222221111 1225789999
Q ss_pred CCchHHHHHHHcCCHHHHHHHHHcCCCCCCCcCC
Q 041785 147 EKNTALHEAVSHGNVEVVKILTREDPDYPYSANN 180 (181)
Q Consensus 147 ~g~t~l~~A~~~~~~~~~~~Ll~~g~~~~~~~~~ 180 (181)
.|+||||+|+..|+.+++++|+++|++++.+++.
T Consensus 282 ~G~TpLh~A~~~g~~~~v~~Ll~~Gad~~~~d~~ 315 (327)
T 1sw6_A 282 NGDTCLNIAARLGNISIVDALLDYGADPFIANKS 315 (327)
T ss_dssp TSCCHHHHHHHHCCHHHHHHHHHTTCCTTCCCTT
T ss_pred CCCCHHHHHHHcCCHHHHHHHHHcCCCCcccCCC
Confidence 9999999999999999999999999999988753
No 28
>1yyh_A HN1;, notch 1, ankyrin domain; ankyrin repeats, cell cycle,transcription; 1.90A {Homo sapiens} PDB: 2he0_A 2f8x_K 3nbn_B 3v79_K* 1ot8_A
Probab=99.95 E-value=3e-27 Score=168.95 Aligned_cols=152 Identities=20% Similarity=0.158 Sum_probs=121.2
Q ss_pred ccCCCHHHHHHHHcCCcHHHHHHHHHhcccccccCCCCchhHHHHhhhhhhhhHHHHHHHHHhhccc-cccccccCCCcH
Q 041785 22 QSQMDPNLFKAAADGSVEPFKDMAREVIESSLTVHTKNTILHINIICQETENASTKFVEEILEICPA-LLLQVNAKGDTP 100 (181)
Q Consensus 22 ~~~~~t~l~~a~~~g~~~~~~~ll~~~~~~~~~~~~g~t~Lh~a~~~~~~~~~~~~~l~~~~~~~~~-~~~~~~~~g~t~ 100 (181)
...|.||||+|+..|+.+++++|++.|++++..+..|.||||+| +..++.+++++|++. +. +++.++..|.||
T Consensus 54 d~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A--~~~~~~~~v~~Ll~~----~~~~~~~~~~~g~t~ 127 (253)
T 1yyh_A 54 DRTGETALHLAARYSRSDAAKRLLEASADANIQDNMGRTPLHAA--VSADAQGVFQILIRN----RATDLDARMHDGTTP 127 (253)
T ss_dssp CTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHH--HHHTCHHHHHHHHHS----TTSCTTCCCTTCCCH
T ss_pred CCCCCcHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCHHHHH--HHcCCHHHHHHHHHc----CCCCccccCCCCCcH
Confidence 46788999999999999999999999988888888999999999 889999999998886 43 777778888888
Q ss_pred HHHHHHcCCHHHHHHHHHhhhhccCCCCCCcchHHHH---------------HHHhhcccCCCchHHHHHHHcCCHHHHH
Q 041785 101 LHLAAKYSHFDIVRVLIERAQLAQHGDEEPESGIEAF---------------RQMIRMVNNEKNTALHEAVSHGNVEVVK 165 (181)
Q Consensus 101 L~~a~~~~~~~~~~~L~~~~~~~~~~~~~~~~~~~~~---------------~~~~~~~~~~g~t~l~~A~~~~~~~~~~ 165 (181)
||+|+..++.+++++|++.|+++...+..+....... +.+++.+|..|.||||+|+..|+.++++
T Consensus 128 L~~A~~~~~~~~v~~Ll~~g~~~~~~d~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~~~~g~tpL~~A~~~~~~~~v~ 207 (253)
T 1yyh_A 128 LILAARLAVEGMLEDLINSHADVNAVDDLGKSALHWAAAVNNVDAAVVLLKNGANKDMQNNREETPLFLAAREGSYETAK 207 (253)
T ss_dssp HHHHHHHTCSSHHHHHHHTTCCTTCBCTTSCBHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHHTCHHHHH
T ss_pred HHHHHHcChHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHCCCHHHHH
Confidence 8888888888888888888877754444444433222 1245677888888888888888888888
Q ss_pred HHHHcCCCCCCCcC
Q 041785 166 ILTREDPDYPYSAN 179 (181)
Q Consensus 166 ~Ll~~g~~~~~~~~ 179 (181)
+|+++|++++..+.
T Consensus 208 ~Ll~~ga~~~~~d~ 221 (253)
T 1yyh_A 208 VLLDHFANRDITDH 221 (253)
T ss_dssp HHHHTTCCTTCCCT
T ss_pred HHHHcCCCcccccc
Confidence 88888888877654
No 29
>2vge_A RELA-associated inhibitor; iaspp, nucleus, apoptosis, repressor, cytoplasm, phosphorylation, P53 binding protein, ANK repeat, SH3 domain; 2.10A {Homo sapiens}
Probab=99.95 E-value=2.2e-28 Score=172.67 Aligned_cols=134 Identities=19% Similarity=0.178 Sum_probs=125.3
Q ss_pred ccCCCHHHHHHHHcCCcHHHHHHHHHhcccccccCCCCchhHHHHhhhhhhhhHHHHHHHHHhhccccccccccCCCcHH
Q 041785 22 QSQMDPNLFKAAADGSVEPFKDMAREVIESSLTVHTKNTILHINIICQETENASTKFVEEILEICPALLLQVNAKGDTPL 101 (181)
Q Consensus 22 ~~~~~t~l~~a~~~g~~~~~~~ll~~~~~~~~~~~~g~t~Lh~a~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~g~t~L 101 (181)
...+.||||.|+..|+.+++++|++.|++++.++..|.||||+| +..++.+++++|++. |++++.+|..|+|||
T Consensus 18 ~~~~~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~d~~g~tpLh~A--~~~g~~~~v~~Ll~~----ga~~n~~d~~g~tpL 91 (229)
T 2vge_A 18 RLNPLVLLLDAALTGELEVVQQAVKEMNDPSQPNEEGITALHNA--ICGANYSIVDFLITA----GANVNSPDSHGWTPL 91 (229)
T ss_dssp TSCHHHHHHHHHHHTCHHHHHHHHHHSSCTTCCCTTSCCHHHHH--HHTTCHHHHHHHHHT----TCCTTCCCTTCCCHH
T ss_pred ccchhHHHHHHHHcCCHHHHHHHHhcCCCCCCCCCCCCCHHHHH--HHcCCHHHHHHHHHC----CCCCCCCCCCCCCHH
Confidence 44567999999999999999999999999998999999999999 999999999999997 999999999999999
Q ss_pred HHHHHcCCHHHHHHHHHhhhhccCCCCCCcchHHHHHHHhhccc-CCCchHHHHH--HHcCCHHHHHHHHHcCCCCCCCc
Q 041785 102 HLAAKYSHFDIVRVLIERAQLAQHGDEEPESGIEAFRQMIRMVN-NEKNTALHEA--VSHGNVEVVKILTREDPDYPYSA 178 (181)
Q Consensus 102 ~~a~~~~~~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~g~t~l~~A--~~~~~~~~~~~Ll~~g~~~~~~~ 178 (181)
|+|+..|+.+++++|++.|+++ +.++ ..|+||||+| +..|+.+++++|+++|++++..+
T Consensus 92 h~A~~~g~~~~v~~Ll~~ga~~------------------~~~~~~~g~tpL~~A~a~~~~~~~~v~~Ll~~ga~~~~~~ 153 (229)
T 2vge_A 92 HCAASCNDTVICMALVQHGAAI------------------FATTLSDGATAFEKCDPYREGYADCATYLADVEQSMGLMN 153 (229)
T ss_dssp HHHHHTTCHHHHHHHHTTTCCT------------------TCCCSSTTCCTGGGCCTTSTTHHHHHHHHHHHHHHTTTSG
T ss_pred HHHHHcCCHHHHHHHHHcCCCc------------------ccccCCCCCCHHHHHHHHhcChHHHHHHHHHcCCCccccc
Confidence 9999999999999999999988 6765 6999999999 99999999999999999998875
Q ss_pred C
Q 041785 179 N 179 (181)
Q Consensus 179 ~ 179 (181)
+
T Consensus 154 ~ 154 (229)
T 2vge_A 154 S 154 (229)
T ss_dssp G
T ss_pred C
Confidence 4
No 30
>1ikn_D Protein (I-kappa-B-alpha), protein (NF-kappa-B P50D subunit); transcription factor, IKB/NFKB complex; 2.30A {Homo sapiens} SCOP: d.211.1.1 PDB: 1nfi_E
Probab=99.95 E-value=1.5e-27 Score=168.71 Aligned_cols=139 Identities=23% Similarity=0.222 Sum_probs=115.9
Q ss_pred cccCCCHHHHHHHHcCCcHHHHHHHHHhcccccccCCCCchhHHHHhhhhhhhhHHHHHHHHHhhc--cccccccccCCC
Q 041785 21 KQSQMDPNLFKAAADGSVEPFKDMAREVIESSLTVHTKNTILHINIICQETENASTKFVEEILEIC--PALLLQVNAKGD 98 (181)
Q Consensus 21 ~~~~~~t~l~~a~~~g~~~~~~~ll~~~~~~~~~~~~g~t~Lh~a~~~~~~~~~~~~~l~~~~~~~--~~~~~~~~~~g~ 98 (181)
....|.||||+|+..|+.+++++|++.|++++.++..|.||||+| +..++.+++++|+...... ...++..+..|.
T Consensus 41 ~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A--~~~~~~~~v~~Ll~~~~~~~~~~~~~~~~~~g~ 118 (236)
T 1ikn_D 41 QNNLQQTPLHLAVITNQPEIAEALLGAGCDPELRDFRGNTPLHLA--CEQGCLASVGVLTQSCTTPHLHSILKATNYNGH 118 (236)
T ss_dssp CCTTCCCHHHHHHHTTCHHHHHCCCSCCCCSCCCCTTCCCHHHHH--HHHTCHHHHHHHHHSTTTTSSSCGGGCCCTTCC
T ss_pred cCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCCHHHHH--HHcCCHHHHHHHHhcccchhHHHHhhccCCCCC
Confidence 345688999999999999999999999988888889999999999 9999999999998861100 122567788899
Q ss_pred cHHHHHHHcCCHHHHHHHHHhhhhccCCCCCCcchHHHHHHHhhcccC-CCchHHHHHHHcCCHHHHHHHHHcCCCCCCC
Q 041785 99 TPLHLAAKYSHFDIVRVLIERAQLAQHGDEEPESGIEAFRQMIRMVNN-EKNTALHEAVSHGNVEVVKILTREDPDYPYS 177 (181)
Q Consensus 99 t~L~~a~~~~~~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~g~t~l~~A~~~~~~~~~~~Ll~~g~~~~~~ 177 (181)
||||+|+..++.+++++|++.|+++ +.++. .|+||||+|+..|+.+++++|+++|++++..
T Consensus 119 t~L~~A~~~~~~~~v~~Ll~~g~~~------------------~~~~~~~g~tpL~~A~~~~~~~~v~~Ll~~ga~~~~~ 180 (236)
T 1ikn_D 119 TCLHLASIHGYLGIVELLVSLGADV------------------NAQEPCNGRTALHLAVDLQNPDLVSLLLKCGADVNRV 180 (236)
T ss_dssp CHHHHHHHTTCHHHHHHHHHHTCCT------------------TCCCTTTCCCHHHHHHHTTCHHHHHHHHTTTCCSCCC
T ss_pred CHHHHHHHcCCHHHHHHHHHcCCCC------------------CCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCcc
Confidence 9999999999999999999999887 66776 8888888888888888888888888888776
Q ss_pred cC
Q 041785 178 AN 179 (181)
Q Consensus 178 ~~ 179 (181)
+.
T Consensus 181 ~~ 182 (236)
T 1ikn_D 181 TY 182 (236)
T ss_dssp CT
T ss_pred cC
Confidence 54
No 31
>3aji_A 26S proteasome non-ATPase regulatory subunit 10; gankyrin, S6 ATPase, P-benzoyl-L-phenylalanine, PBPA, amber suppression; HET: PBF; 2.05A {Mus musculus} PDB: 2dvw_A 2dwz_A* 1tr4_A 1uoh_A 1qym_A
Probab=99.95 E-value=5.9e-27 Score=164.93 Aligned_cols=150 Identities=18% Similarity=0.220 Sum_probs=125.1
Q ss_pred CCCHHHHHHHHcCCcHHHHHHHHHhcc-cccccCCCCchhHHHHhhhhhhhhHHHHHHHHHhhccccccccccCCCcHHH
Q 041785 24 QMDPNLFKAAADGSVEPFKDMAREVIE-SSLTVHTKNTILHINIICQETENASTKFVEEILEICPALLLQVNAKGDTPLH 102 (181)
Q Consensus 24 ~~~t~l~~a~~~g~~~~~~~ll~~~~~-~~~~~~~g~t~Lh~a~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~g~t~L~ 102 (181)
.+.+|||.|+..|+.+.+++++..+.. .+..+..|.||||+| +..++.+++++|++. +.+++.++..|+||||
T Consensus 5 ~~~~~l~~A~~~g~~~~v~~ll~~~~~~~~~~~~~g~t~L~~A--~~~g~~~~v~~Ll~~----g~~~~~~~~~g~t~L~ 78 (231)
T 3aji_A 5 VSNIMICNLAYSGKLDELKERILADKSLATRTDQDSRTALHWA--CSAGHTEIVEFLLQL----GVPVNDKDDAGWSPLH 78 (231)
T ss_dssp CSSSHHHHHHHHTCHHHHHHHHHHCGGGGGCCCTTSCCHHHHH--HHHTCHHHHHHHHHT----TCCSCCCCTTSCCHHH
T ss_pred cccchHHHHHHhCCHHHHHHHHHhchhhhhcCCCCCCCHHHHH--HHcCcHHHHHHHHHh----CCCCCCcCCCCCCHHH
Confidence 467899999999999999999997654 346789999999999 999999999999997 8999999999999999
Q ss_pred HHHHcCCHHHHHHHHHhhhhccCCCCCCcchHHHH---------------HHHhhcccCCCchHHHHHHHcCCHHHHHHH
Q 041785 103 LAAKYSHFDIVRVLIERAQLAQHGDEEPESGIEAF---------------RQMIRMVNNEKNTALHEAVSHGNVEVVKIL 167 (181)
Q Consensus 103 ~a~~~~~~~~~~~L~~~~~~~~~~~~~~~~~~~~~---------------~~~~~~~~~~g~t~l~~A~~~~~~~~~~~L 167 (181)
+|+..++.+++++|++.|.++...+..+....... +..++.++..|.||||+|+..|+.+++++|
T Consensus 79 ~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~L 158 (231)
T 3aji_A 79 IAASAGXDEIVKALLVKGAHVNAVNQNGCTPLHYAASKNRHEIAVMLLEGGANPDAKDHYDATAMHRAAAKGNLKMVHIL 158 (231)
T ss_dssp HHHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHHTCHHHHHHH
T ss_pred HHHHcCHHHHHHHHHHcCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCcHHHHHHHcCCHHHHHHH
Confidence 99999999999999999988855554444433222 123556777888888888888888888888
Q ss_pred HHcCCCCCCCcC
Q 041785 168 TREDPDYPYSAN 179 (181)
Q Consensus 168 l~~g~~~~~~~~ 179 (181)
+++|++++.++.
T Consensus 159 l~~g~~~~~~~~ 170 (231)
T 3aji_A 159 LFYKASTNIQDT 170 (231)
T ss_dssp HHTTCCSCCCCT
T ss_pred HhcCCCccccCC
Confidence 888888877654
No 32
>1yyh_A HN1;, notch 1, ankyrin domain; ankyrin repeats, cell cycle,transcription; 1.90A {Homo sapiens} PDB: 2he0_A 2f8x_K 3nbn_B 3v79_K* 1ot8_A
Probab=99.95 E-value=2.9e-27 Score=169.02 Aligned_cols=144 Identities=18% Similarity=0.174 Sum_probs=103.0
Q ss_pred HHHHHcCCcHHHHHHHHHhcccc-cccCCCCchhHHHHhhhhhhhhHHHHHHHHHhhccccccccccCCCcHHHHHHHcC
Q 041785 30 FKAAADGSVEPFKDMAREVIESS-LTVHTKNTILHINIICQETENASTKFVEEILEICPALLLQVNAKGDTPLHLAAKYS 108 (181)
Q Consensus 30 ~~a~~~g~~~~~~~ll~~~~~~~-~~~~~g~t~Lh~a~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~g~t~L~~a~~~~ 108 (181)
..+...++.+++++|++.|.+.+ ..+..|.||||+| +..++.+++++|++. +++++.++..|.||||+|+..+
T Consensus 28 ~~~~~~~~~~~v~~Ll~~g~~~~~~~d~~g~t~L~~A--~~~g~~~~v~~Ll~~----g~~~~~~~~~g~t~L~~A~~~~ 101 (253)
T 1yyh_A 28 NSEEEEDAPAVISDFIYQGASLHNQTDRTGETALHLA--ARYSRSDAAKRLLEA----SADANIQDNMGRTPLHAAVSAD 101 (253)
T ss_dssp ------------------------CCCTTSCCHHHHH--HHTTCHHHHHHHHHT----TCCTTCCCTTSCCHHHHHHHHT
T ss_pred chhhcCCChHHHHHHHHccCCcccccCCCCCcHHHHH--HHcCCHHHHHHHHHc----CCCCCCCCCCCCCHHHHHHHcC
Confidence 34778899999999999998886 4588999999999 999999999999997 9999999999999999999999
Q ss_pred CHHHHHHHHHhhh-hccCCCCCCcchHHHH---------------HHHhhcccCCCchHHHHHHHcCCHHHHHHHHHcCC
Q 041785 109 HFDIVRVLIERAQ-LAQHGDEEPESGIEAF---------------RQMIRMVNNEKNTALHEAVSHGNVEVVKILTREDP 172 (181)
Q Consensus 109 ~~~~~~~L~~~~~-~~~~~~~~~~~~~~~~---------------~~~~~~~~~~g~t~l~~A~~~~~~~~~~~Ll~~g~ 172 (181)
+.+++++|++.+. ++...+..+....... +.+++.+|..|+||||+|+..|+.+++++|+++|+
T Consensus 102 ~~~~v~~Ll~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~d~~g~t~L~~A~~~~~~~~v~~Ll~~ga 181 (253)
T 1yyh_A 102 AQGVFQILIRNRATDLDARMHDGTTPLILAARLAVEGMLEDLINSHADVNAVDDLGKSALHWAAAVNNVDAAVVLLKNGA 181 (253)
T ss_dssp CHHHHHHHHHSTTSCTTCCCTTCCCHHHHHHHHTCSSHHHHHHHTTCCTTCBCTTSCBHHHHHHHHTCHHHHHHHHHTTC
T ss_pred CHHHHHHHHHcCCCCccccCCCCCcHHHHHHHcChHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHHcCC
Confidence 9999999999987 5544444444433222 23567888999999999999999999999999999
Q ss_pred CCCCCcC
Q 041785 173 DYPYSAN 179 (181)
Q Consensus 173 ~~~~~~~ 179 (181)
+++..+.
T Consensus 182 ~~~~~~~ 188 (253)
T 1yyh_A 182 NKDMQNN 188 (253)
T ss_dssp CTTCCCT
T ss_pred CCCCcCC
Confidence 9988764
No 33
>2f8y_A Notch homolog 1, translocation-associated (drosophila); ankyrin repeats, transcription; 1.55A {Homo sapiens} PDB: 2qc9_A 1ymp_A
Probab=99.95 E-value=7.5e-27 Score=163.58 Aligned_cols=153 Identities=19% Similarity=0.151 Sum_probs=122.1
Q ss_pred ccCCCHHHHHHHHcCCcHHHHHHHHHhcccccccCCCCchhHHHHhhhhhhhhHHHHHHHHHhhccccccccccCCCcHH
Q 041785 22 QSQMDPNLFKAAADGSVEPFKDMAREVIESSLTVHTKNTILHINIICQETENASTKFVEEILEICPALLLQVNAKGDTPL 101 (181)
Q Consensus 22 ~~~~~t~l~~a~~~g~~~~~~~ll~~~~~~~~~~~~g~t~Lh~a~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~g~t~L 101 (181)
...|.||||+|+..|+.+++++|++.|++++..+..|.||||+| +..++.+++++|++. ...+++..+..|.|||
T Consensus 22 d~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A--~~~~~~~~v~~Ll~~---~~~~~~~~~~~g~t~L 96 (223)
T 2f8y_A 22 DRTGETALHLAARYSRSDAAKRLLEASADANIQDNMGRTPLHAA--VSADAQGVFQILIRN---RATDLDARMHDGTTPL 96 (223)
T ss_dssp TTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHH--HHTTCHHHHHHHHHB---TTSCTTCCCTTCCCHH
T ss_pred CCCCCchHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCCHHHHH--HHcCCHHHHHHHHHc---CCCCcccCCCCCCcHH
Confidence 45788999999999999999999999988888889999999999 999999999999886 2337788888899999
Q ss_pred HHHHHcCCHHHHHHHHHhhhhccCCCCCCcchHHHH---------------HHHhhcccCCCchHHHHHHHcCCHHHHHH
Q 041785 102 HLAAKYSHFDIVRVLIERAQLAQHGDEEPESGIEAF---------------RQMIRMVNNEKNTALHEAVSHGNVEVVKI 166 (181)
Q Consensus 102 ~~a~~~~~~~~~~~L~~~~~~~~~~~~~~~~~~~~~---------------~~~~~~~~~~g~t~l~~A~~~~~~~~~~~ 166 (181)
|+|+..++.+++++|++.|+++...+..+....... +.+++.+|..|.||||+|+..|+.+++++
T Consensus 97 ~~A~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~ 176 (223)
T 2f8y_A 97 ILAARLAVEGMLEDLINSHADVNAVDDLGKSALHWAAAVNNVDAAVVLLKNGANKDMQNNREETPLFLAAREGSYETAKV 176 (223)
T ss_dssp HHHHHHTCHHHHHHHHHTTCCTTCBCTTSCBHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHHTCHHHHHH
T ss_pred HHHHHhCcHHHHHHHHHcCCCCcCcCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCcCHHHHHHHcCCHHHHHH
Confidence 999999999999999998887754444444332221 12356777788888888888888888888
Q ss_pred HHHcCCCCCCCcC
Q 041785 167 LTREDPDYPYSAN 179 (181)
Q Consensus 167 Ll~~g~~~~~~~~ 179 (181)
|+++|++++..+.
T Consensus 177 Ll~~ga~~~~~~~ 189 (223)
T 2f8y_A 177 LLDHFANRDITDH 189 (223)
T ss_dssp HHHTTCCTTCCCT
T ss_pred HHHcCCCCccccc
Confidence 8888888876654
No 34
>1oy3_D Transcription factor inhibitor I-kappa-B-beta; protein-protein complex, transcription factors, nuclear localization, DNA binding protein; 2.05A {Mus musculus} SCOP: d.211.1.1 PDB: 1k3z_D
Probab=99.95 E-value=3.3e-27 Score=170.58 Aligned_cols=157 Identities=16% Similarity=0.127 Sum_probs=113.1
Q ss_pred cccCCCHHHHHHHHcCCcHHHHHHHHHhcccccccCCCCchhHHHHhhhhhhhhHHHHHHHHHh----------------
Q 041785 21 KQSQMDPNLFKAAADGSVEPFKDMAREVIESSLTVHTKNTILHINIICQETENASTKFVEEILE---------------- 84 (181)
Q Consensus 21 ~~~~~~t~l~~a~~~g~~~~~~~ll~~~~~~~~~~~~g~t~Lh~a~~~~~~~~~~~~~l~~~~~---------------- 84 (181)
....|.||||+|+..|+.+++++|++.|++++.++..|.||||+| +..++.+++++|++...
T Consensus 41 ~~~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~~~~~g~tpL~~A--~~~~~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~ 118 (282)
T 1oy3_D 41 QNDLGQTALHLAAILGEASTVEKLYAAGAGVLVAERGGHTALHLA--CRVRAHTCACVLLQPRPSHPRDASDTYLTQSQD 118 (282)
T ss_dssp CCTTSCCHHHHHHHHTCHHHHHHHHHTTCCSSCCCTTSCCHHHHH--TTTTCHHHHHHHSSSCCSSCCCC----------
T ss_pred cCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCHHHHH--HHcCCcchhHhhhccCCCCchhhHHHHhhcccc
Confidence 345678888888888888888888888888777778888888888 88888888887776310
Q ss_pred ---------------------------hccccccccccCCCcHHHHHHHcCCHHHHHHHHHhhhhccCCCCC-CcchHHH
Q 041785 85 ---------------------------ICPALLLQVNAKGDTPLHLAAKYSHFDIVRVLIERAQLAQHGDEE-PESGIEA 136 (181)
Q Consensus 85 ---------------------------~~~~~~~~~~~~g~t~L~~a~~~~~~~~~~~L~~~~~~~~~~~~~-~~~~~~~ 136 (181)
..+.+++.++..|.||||+|+..|+.+++++|++.|+++...... +..+...
T Consensus 119 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~~g~tpL~~ 198 (282)
T 1oy3_D 119 CTPDTSHAPAAVDSQPNPENEEEPRDEDWRLQLEAENYDGHTPLHVAVIHKDAEMVRLLRDAGADLNKPEPTCGRTPLHL 198 (282)
T ss_dssp -------------------------CCCGGGGTTCCCTTSCCHHHHHHHTTCHHHHHHHHHHTCCTTCCCTTTCCCHHHH
T ss_pred cCcchhcchhhhccccccchhhhhhhhhhhhcCCCcCCCCcCHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCcCHHHH
Confidence 001235666777888888888888888888888888777544322 3333222
Q ss_pred H---------------HHHhhcccCCCchHHHHHHHcCCHHHHHHHHHcCCCCCCCcC
Q 041785 137 F---------------RQMIRMVNNEKNTALHEAVSHGNVEVVKILTREDPDYPYSAN 179 (181)
Q Consensus 137 ~---------------~~~~~~~~~~g~t~l~~A~~~~~~~~~~~Ll~~g~~~~~~~~ 179 (181)
. +.+++.+|..|+||||+|+..|+.+++++|+++|++++.+++
T Consensus 199 A~~~~~~~~v~~Ll~~gad~~~~d~~g~tpL~~A~~~~~~~~v~~Ll~~ga~~~~~~~ 256 (282)
T 1oy3_D 199 AVEAQAASVLELLLKAGADPTARMYGGRTPLGSALLRPNPILARLLRAHGAPEPEDGG 256 (282)
T ss_dssp HHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHTSSCHHHHHHHHHTTCCCCCCC-
T ss_pred HHHcCCHHHHHHHHHcCCCCcccccCCCCHHHHHHHcCCcHHHHHHHHcCCCcCcCCC
Confidence 1 234567788888888888888888888888888888877664
No 35
>2dzn_A Probable 26S proteasome regulatory subunit P28; ankyrin repeats, A-helical domain, structural genomics, NPPSFA; 2.20A {Saccharomyces cerevisiae} SCOP: d.211.1.1 PDB: 2dzo_A 1ixv_A 1wg0_A
Probab=99.95 E-value=3.7e-27 Score=165.55 Aligned_cols=152 Identities=18% Similarity=0.189 Sum_probs=106.7
Q ss_pred ccCCCHHHHHHHHcCCcHHHHHHHHHh--ccccc-ccCCCCchhHHHHhhhhhhhhHHHHHHHHHhhcc--ccccccccC
Q 041785 22 QSQMDPNLFKAAADGSVEPFKDMAREV--IESSL-TVHTKNTILHINIICQETENASTKFVEEILEICP--ALLLQVNAK 96 (181)
Q Consensus 22 ~~~~~t~l~~a~~~g~~~~~~~ll~~~--~~~~~-~~~~g~t~Lh~a~~~~~~~~~~~~~l~~~~~~~~--~~~~~~~~~ 96 (181)
...|.||||+|+..|+.+++++|++.+ ++... .+..|.||||+| +..++.+++++|++. + .+++.++..
T Consensus 33 ~~~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~g~t~L~~A--~~~~~~~~~~~Ll~~----g~~~~~~~~~~~ 106 (228)
T 2dzn_A 33 DQDGRIPLHWSVSFQAHEITSFLLSKMENVNLDDYPDDSGWTPFHIA--CSVGNLEVVKSLYDR----PLKPDLNKITNQ 106 (228)
T ss_dssp CTTSCCHHHHHHHTTCHHHHHHHHHTCTTCCGGGCCCTTSCCHHHHH--HHHCCHHHHHHHHSS----SSCCCTTCCCTT
T ss_pred CCCCCCHHHHHHHcCCHHHHHHHHhccccccccccCCCCCCCHHHHH--HHcCCHHHHHHHHhC----CCCcccccCCcC
Confidence 445677777777777777777777766 44443 566677777777 777777777777664 4 666666677
Q ss_pred CCcHHHHHHHcCCHHHHHHHHHhhhhccCCCCCCcchHHHH---------------H-HHhhcccCCCchHHHHHHHcCC
Q 041785 97 GDTPLHLAAKYSHFDIVRVLIERAQLAQHGDEEPESGIEAF---------------R-QMIRMVNNEKNTALHEAVSHGN 160 (181)
Q Consensus 97 g~t~L~~a~~~~~~~~~~~L~~~~~~~~~~~~~~~~~~~~~---------------~-~~~~~~~~~g~t~l~~A~~~~~ 160 (181)
|.||||+|+..++.+++++|++.|+++...+..+....... + .+++.+|..|+||||+|+..|+
T Consensus 107 g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~d~~g~t~L~~A~~~~~ 186 (228)
T 2dzn_A 107 GVTCLHLAVGKKWFEVSQFLIENGASVRIKDKFNQIPLHRAASVGSLKLIELLCGLGKSAVNWQDKQGWTPLFHALAEGH 186 (228)
T ss_dssp CCCHHHHHHHTTCHHHHHHHHHTTCCSCCCCTTSCCHHHHHHHTTCHHHHHHHHTTTCCCSCCCCTTSCCHHHHHHHTTC
T ss_pred CCCHHHHHHHcCCHhHHHHHHHcCCCccccCCCCCCHHHHHHHcCCHHHHHHHHhcCcccccCcCCCCCCHHHHHHHcCC
Confidence 77777777777777777777777766644444443332221 1 2346778899999999999999
Q ss_pred HHHHHHHH-HcCCCCCCCcC
Q 041785 161 VEVVKILT-REDPDYPYSAN 179 (181)
Q Consensus 161 ~~~~~~Ll-~~g~~~~~~~~ 179 (181)
.+++++|+ +.|++++..++
T Consensus 187 ~~~v~~Ll~~~ga~~~~~~~ 206 (228)
T 2dzn_A 187 GDAAVLLVEKYGAEYDLVDN 206 (228)
T ss_dssp HHHHHHHHHHHCCCSCCBCT
T ss_pred HHHHHHHHHhcCCCCCccCC
Confidence 99999999 88999988764
No 36
>2pnn_A Transient receptor potential cation channel subfa member 1; TRPV1, ankyrin repeat domain, transport protein; HET: ATP; 2.70A {Rattus norvegicus} PDB: 2nyj_A*
Probab=99.95 E-value=2.2e-27 Score=171.25 Aligned_cols=139 Identities=14% Similarity=0.116 Sum_probs=119.7
Q ss_pred ccCCCHHHHHHHHcCCcHHHHHHHHHhcccccccC--------------CCCchhHHHHhhhhhhhhHHHHHHH---HHh
Q 041785 22 QSQMDPNLFKAAADGSVEPFKDMAREVIESSLTVH--------------TKNTILHINIICQETENASTKFVEE---ILE 84 (181)
Q Consensus 22 ~~~~~t~l~~a~~~g~~~~~~~ll~~~~~~~~~~~--------------~g~t~Lh~a~~~~~~~~~~~~~l~~---~~~ 84 (181)
...|.||||+|+..|+.++++.|++.|++++..+. .|.||||+| +..++.+++++|++ .
T Consensus 98 d~~g~tpL~~A~~~g~~~~v~~Ll~~ga~~~~~~~~~~~~~~~~~~~~~~g~tpL~~A--~~~g~~~~v~~Ll~~~~~-- 173 (273)
T 2pnn_A 98 YYKGQTALHIAIERRNMTLVTLLVENGADVQAAANGDFFKKTKGRPGFYFGELPLSLA--ACTNQLAIVKFLLQNSWQ-- 173 (273)
T ss_dssp TTTTCCHHHHHHHTTCHHHHHHHHHTTCCTTCCBCSGGGSSCSSSCCCCSCBSHHHHH--HHTTCHHHHHHHHHCSSC--
T ss_pred cCCCCCHHHHHHHcCCHHHHHHHHHCCCCcCccccccccccccccccccCCCCHHHHH--HHcCCHHHHHHHHhcccC--
Confidence 34799999999999999999999999999987776 799999999 99999999999999 7
Q ss_pred hccccccccccCCCcHHHHHHHcCC---------HHHHHHHHHhhhhccCCCCCCcchHHHHHHHhhcccCCCchHHHHH
Q 041785 85 ICPALLLQVNAKGDTPLHLAAKYSH---------FDIVRVLIERAQLAQHGDEEPESGIEAFRQMIRMVNNEKNTALHEA 155 (181)
Q Consensus 85 ~~~~~~~~~~~~g~t~L~~a~~~~~---------~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~t~l~~A 155 (181)
+++++.+|..|+||||+|+..++ .+++++|++.|+++..... .++.+|..|+||||+|
T Consensus 174 --gad~~~~d~~g~tpLh~A~~~~~~~~~~~~~~~~~v~~Ll~~ga~~n~~~~-----------~~~~~d~~g~TpL~~A 240 (273)
T 2pnn_A 174 --PADISARDSVGNTVLHALVEVADNTVDNTKFVTSMYNEILILGAKLHPTLK-----------LEEITNRKGLTPLALA 240 (273)
T ss_dssp --CCCTTCCCTTSCCHHHHHHHHCCSCHHHHHHHHHHHHHHHHHHHHHCTTCC-----------GGGCCCTTSCCHHHHH
T ss_pred --CCCceeeCCCCCcHHHHHHHccCcchhHHHHHHHHHHHHHHhhhhcccccc-----------cccccCCCCCCHHHHH
Confidence 89999999999999999999998 7999999999998711000 0125899999999999
Q ss_pred HHcCCHHHHHHHHHcCC-CCCCC
Q 041785 156 VSHGNVEVVKILTREDP-DYPYS 177 (181)
Q Consensus 156 ~~~~~~~~~~~Ll~~g~-~~~~~ 177 (181)
+..|+.+++++|+++|+ |...+
T Consensus 241 ~~~g~~~iv~~Ll~~ga~dp~~~ 263 (273)
T 2pnn_A 241 ASSGKIGVLAYILQREIHEPECR 263 (273)
T ss_dssp HHTTCHHHHHHHHHHHTC-----
T ss_pred HHhChHHHHHHHHHCCCCCchhh
Confidence 99999999999999999 55443
No 37
>1oy3_D Transcription factor inhibitor I-kappa-B-beta; protein-protein complex, transcription factors, nuclear localization, DNA binding protein; 2.05A {Mus musculus} SCOP: d.211.1.1 PDB: 1k3z_D
Probab=99.95 E-value=3e-27 Score=170.75 Aligned_cols=116 Identities=14% Similarity=0.041 Sum_probs=93.1
Q ss_pred cccCCCHHHHHHHHcCCcHHHHHHHHHhcccccccC-CCCchhHHHHhhhhhhhhHHHHHHHHHhhccccccccccCCCc
Q 041785 21 KQSQMDPNLFKAAADGSVEPFKDMAREVIESSLTVH-TKNTILHINIICQETENASTKFVEEILEICPALLLQVNAKGDT 99 (181)
Q Consensus 21 ~~~~~~t~l~~a~~~g~~~~~~~ll~~~~~~~~~~~-~g~t~Lh~a~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~g~t 99 (181)
....|.||||+|+..|+.+++++|++.|++++..+. .|.||||+| +..++.+++++|++. |++++.++..|.|
T Consensus 154 ~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~~g~tpL~~A--~~~~~~~~v~~Ll~~----gad~~~~d~~g~t 227 (282)
T 1oy3_D 154 ENYDGHTPLHVAVIHKDAEMVRLLRDAGADLNKPEPTCGRTPLHLA--VEAQAASVLELLLKA----GADPTARMYGGRT 227 (282)
T ss_dssp CCTTSCCHHHHHHHTTCHHHHHHHHHHTCCTTCCCTTTCCCHHHHH--HHTTCHHHHHHHHHT----TCCTTCCCTTSCC
T ss_pred cCCCCcCHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCcCHHHHH--HHcCCHHHHHHHHHc----CCCCcccccCCCC
Confidence 355788999999999999999999999999987664 499999999 999999999999997 9999999999999
Q ss_pred HHHHHHHcCCHHHHHHHHHhhhhccCCCCCCcchHHHHHHHhhcccCCCchHHHHHHHcCC
Q 041785 100 PLHLAAKYSHFDIVRVLIERAQLAQHGDEEPESGIEAFRQMIRMVNNEKNTALHEAVSHGN 160 (181)
Q Consensus 100 ~L~~a~~~~~~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~t~l~~A~~~~~ 160 (181)
|||+|+..++.+++++|+++|+++ +.++..|.||+++|....+
T Consensus 228 pL~~A~~~~~~~~v~~Ll~~ga~~------------------~~~~~~g~tpl~~a~~~~~ 270 (282)
T 1oy3_D 228 PLGSALLRPNPILARLLRAHGAPE------------------PEDGGDKLSPCSSSGSDSD 270 (282)
T ss_dssp HHHHHHTSSCHHHHHHHHHTTCCC------------------CCCC---------------
T ss_pred HHHHHHHcCCcHHHHHHHHcCCCc------------------CcCCCcccccccccCCccc
Confidence 999999999999999999999998 8999999999999987654
No 38
>1awc_B Protein (GA binding protein beta 1); complex (transcription regulation/DNA), DNA-binding, nuclear protein, ETS domain, ankyrin repeats; HET: DNA BRU CBR; 2.15A {Mus musculus} SCOP: d.211.1.1
Probab=99.95 E-value=4.3e-27 Score=156.04 Aligned_cols=122 Identities=20% Similarity=0.186 Sum_probs=116.4
Q ss_pred ccCCCHHHHHHHHcCCcHHHHHHHHHhcccccccCCCCchhHHHHhhhhhhhhHHHHHHHHHhhccccccccccCCCcHH
Q 041785 22 QSQMDPNLFKAAADGSVEPFKDMAREVIESSLTVHTKNTILHINIICQETENASTKFVEEILEICPALLLQVNAKGDTPL 101 (181)
Q Consensus 22 ~~~~~t~l~~a~~~g~~~~~~~ll~~~~~~~~~~~~g~t~Lh~a~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~g~t~L 101 (181)
...|.||||+|+..|+.+++++|++.|++++..+..|.||||+| +..++.+++++|++. +++++.++..|.|||
T Consensus 31 ~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A--~~~~~~~~v~~Ll~~----g~~~~~~~~~g~t~L 104 (153)
T 1awc_B 31 DWLGTSPLHLAAQYGHFSTTEVLLRAGVSRDARTKVDRTPLHMA--ASEGHANIVEVLLKH----GADVNAKDMLKMTAL 104 (153)
T ss_dssp CTTCCCHHHHHHHHTCHHHHHHHHTTTCCTTCCCTTCCCHHHHH--HHHTCHHHHHHHHTT----TCCTTCCCTTSCCHH
T ss_pred CCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCHHHHH--HHcChHHHHHHHHHc----CCCCCCCCCCCCCHH
Confidence 45689999999999999999999999999988899999999999 999999999999986 999999999999999
Q ss_pred HHHHHcCCHHHHHHHHHhhhhccCCCCCCcchHHHHHHHhhcccCCCchHHHHHHHcCCHHHHHHH
Q 041785 102 HLAAKYSHFDIVRVLIERAQLAQHGDEEPESGIEAFRQMIRMVNNEKNTALHEAVSHGNVEVVKIL 167 (181)
Q Consensus 102 ~~a~~~~~~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~t~l~~A~~~~~~~~~~~L 167 (181)
|+|+..++.+++++|++.|+++ +.+|..|.||+++|+..|+.+++++|
T Consensus 105 ~~A~~~~~~~~v~~Ll~~ga~~------------------~~~~~~g~t~l~~A~~~~~~~i~~~L 152 (153)
T 1awc_B 105 HWATEHNHQEVVELLIKYGADV------------------HTQSKFCKTAFDISIDNGNEDLAEIL 152 (153)
T ss_dssp HHHHHTTCHHHHHHHHHTTCCT------------------TCCCTTSCCHHHHHHHTTCHHHHHHH
T ss_pred HHHHHcCCHHHHHHHHHcCCCc------------------cccCCCCCCHHHHHHHcCCHHHHHHh
Confidence 9999999999999999999988 88999999999999999999999987
No 39
>2f8y_A Notch homolog 1, translocation-associated (drosophila); ankyrin repeats, transcription; 1.55A {Homo sapiens} PDB: 2qc9_A 1ymp_A
Probab=99.95 E-value=9.5e-27 Score=163.05 Aligned_cols=146 Identities=14% Similarity=0.104 Sum_probs=88.7
Q ss_pred CCCHHHHHHHHcCCcHHHHHHHHHhc-ccccccCCCCchhHHHHhhhhhhhhHHHHHHHHHhhccccccccccCCCcHHH
Q 041785 24 QMDPNLFKAAADGSVEPFKDMAREVI-ESSLTVHTKNTILHINIICQETENASTKFVEEILEICPALLLQVNAKGDTPLH 102 (181)
Q Consensus 24 ~~~t~l~~a~~~g~~~~~~~ll~~~~-~~~~~~~~g~t~Lh~a~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~g~t~L~ 102 (181)
.|.||||+|+..|+.+++++|++.+. +.+..+..|.||||+| +..++.+++++|++. +.+++.++..|.||||
T Consensus 57 ~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~g~t~L~~A--~~~~~~~~~~~Ll~~----g~~~~~~~~~g~t~L~ 130 (223)
T 2f8y_A 57 MGRTPLHAAVSADAQGVFQILIRNRATDLDARMHDGTTPLILA--ARLAVEGMLEDLINS----HADVNAVDDLGKSALH 130 (223)
T ss_dssp TSCCHHHHHHHTTCHHHHHHHHHBTTSCTTCCCTTCCCHHHHH--HHHTCHHHHHHHHHT----TCCTTCBCTTSCBHHH
T ss_pred CCCCHHHHHHHcCCHHHHHHHHHcCCCCcccCCCCCCcHHHHH--HHhCcHHHHHHHHHc----CCCCcCcCCCCCcHHH
Confidence 44555555555555555555555443 3334455555555555 555555555555554 5555555555555555
Q ss_pred HHHHcCCHHHHHHHHHhhhhccCCCCCCcchHHHH---------------HHHhhcccCCCchHHHHHHHcCCHHHHHHH
Q 041785 103 LAAKYSHFDIVRVLIERAQLAQHGDEEPESGIEAF---------------RQMIRMVNNEKNTALHEAVSHGNVEVVKIL 167 (181)
Q Consensus 103 ~a~~~~~~~~~~~L~~~~~~~~~~~~~~~~~~~~~---------------~~~~~~~~~~g~t~l~~A~~~~~~~~~~~L 167 (181)
+|+..++.+++++|++.|+++...+..+....... +.+++.+|..|.||+++|+..++.+++++|
T Consensus 131 ~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~~~~g~t~l~~A~~~~~~~i~~~L 210 (223)
T 2f8y_A 131 WAAAVNNVDAAVVLLKNGANKDMQNNREETPLFLAAREGSYETAKVLLDHFANRDITDHMDRLPRDIAQERMHHDIVRLL 210 (223)
T ss_dssp HHHHTTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHTTCHHHHHHH
T ss_pred HHHHcCCHHHHHHHHHcCCCCCCcCCCCcCHHHHHHHcCCHHHHHHHHHcCCCCccccccCCCHHHHHHHhcchHHHHHH
Confidence 55555555555555555555443333333322221 112478899999999999999999999999
Q ss_pred HHcCCCCC
Q 041785 168 TREDPDYP 175 (181)
Q Consensus 168 l~~g~~~~ 175 (181)
+++|+...
T Consensus 211 ~~~g~~~~ 218 (223)
T 2f8y_A 211 DEYNLVRS 218 (223)
T ss_dssp HHTTCSSC
T ss_pred HHcCCCcc
Confidence 99998754
No 40
>1s70_B 130 kDa myosin-binding subunit of smooth muscle myosin phophatase (M130), serine/threonine protein phosphatase PP1-beta (OR delta) catalytic subunit; myosin phosphatase; HET: PGE; 2.70A {Gallus gallus} SCOP: d.211.1.1
Probab=99.95 E-value=8.7e-27 Score=169.90 Aligned_cols=152 Identities=22% Similarity=0.236 Sum_probs=125.2
Q ss_pred ccCCCHHHHHHHHcCCcHHHHHHHHHhcccccccCCCCchhHHHHhhhhhhhhHHHHHHHHHhhccccccccccCCCcHH
Q 041785 22 QSQMDPNLFKAAADGSVEPFKDMAREVIESSLTVHTKNTILHINIICQETENASTKFVEEILEICPALLLQVNAKGDTPL 101 (181)
Q Consensus 22 ~~~~~t~l~~a~~~g~~~~~~~ll~~~~~~~~~~~~g~t~Lh~a~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~g~t~L 101 (181)
...+.|+||.|+..|+.+++++|++.|++++..+..|.||||+| +..|+.+++++|++. |++++.++..|.|||
T Consensus 37 ~~~~~t~l~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A--~~~g~~~~v~~Ll~~----ga~~~~~~~~g~tpL 110 (299)
T 1s70_B 37 KFDDGAVFLAACSSGDTEEVLRLLERGADINYANVDGLTALHQA--CIDDNVDMVKFLVEN----GANINQPDNEGWIPL 110 (299)
T ss_dssp EECHHHHHHHHHHHTCHHHHHHHHHHCCCTTCBCTTCCBHHHHH--HHTTCHHHHHHHHHT----TCCTTCCCTTSCCHH
T ss_pred ccCCccHHHHHHHcCCHHHHHHHHHcCCCCcccCCCCCCHHHHH--HHcCCHHHHHHHHHC----CCCCCCCCCCCCcHH
Confidence 44567899999999999999999999988888888999999999 899999999999886 888999999999999
Q ss_pred HHHHHcCCHHHHHHHHHhhhhccCCCCCC---------------------------------------------------
Q 041785 102 HLAAKYSHFDIVRVLIERAQLAQHGDEEP--------------------------------------------------- 130 (181)
Q Consensus 102 ~~a~~~~~~~~~~~L~~~~~~~~~~~~~~--------------------------------------------------- 130 (181)
|+|+..|+.+++++|++.|+++...+..+
T Consensus 111 ~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~l~~A~~~~~~~~~~~ll~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~ 190 (299)
T 1s70_B 111 HAAASCGYLDIAEYLISQGAHVGAVNSEGDTPLDIAEEEAMEELLQNEVNRQGVDIEAARKEEERIMLRDARQWLNSGHI 190 (299)
T ss_dssp HHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHCCSHHHHHHHHHHHHHHTCCHHHHHHHHHHHHHHHHHHHHHHTCC
T ss_pred HHHHHcCCHHHHHHHHhCCCCCCCcCCCCCCHHHHHHhcchHHHHHHHHhhcCCCchhhhhhhhhHHHHHHHHHHhccCc
Confidence 99999999999999999887664322211
Q ss_pred ---------cchHHHH---------------HHHhhcccCCCchHHHHHHHcCCHHHHHHHHHcCCCCCCCcC
Q 041785 131 ---------ESGIEAF---------------RQMIRMVNNEKNTALHEAVSHGNVEVVKILTREDPDYPYSAN 179 (181)
Q Consensus 131 ---------~~~~~~~---------------~~~~~~~~~~g~t~l~~A~~~~~~~~~~~Ll~~g~~~~~~~~ 179 (181)
....... +.+++.+|..|+||||+|+..|+.+++++|+++|++++.++.
T Consensus 191 ~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~d~~~~d~~g~tpL~~A~~~~~~~~v~~Ll~~gad~~~~d~ 263 (299)
T 1s70_B 191 NDVRHAKSGGTALHVAAAKGYTEVLKLLIQARYDVNIKDYDGWTPLHAAAHWGKEEACRILVENLCDMEAVNK 263 (299)
T ss_dssp CCCCCTTTCCCHHHHHHHHTCHHHHHHHHTTTCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCT
T ss_pred chhhhcCCCCCHHHHHHHCCcHHHHHHHHHcCCCCCCcCCCCCcHHHHHHhcCCHHHHHHHHHcCCCCCCcCC
Confidence 1111111 134678899999999999999999999999999999988764
No 41
>2xai_A ASB-9, ankyrin repeat and SOCS box protein 9; transcription regulation, autoantibody; 2.58A {Homo sapiens}
Probab=99.95 E-value=7.9e-27 Score=167.49 Aligned_cols=146 Identities=19% Similarity=0.146 Sum_probs=100.8
Q ss_pred CCCHHHHHHHHcCCcHHHHHHHHHhcccccccCCCCchhHHHHhhhhhhhhHHHHHHHHHhhccccccccccCCCcHHHH
Q 041785 24 QMDPNLFKAAADGSVEPFKDMAREVIESSLTVHTKNTILHINIICQETENASTKFVEEILEICPALLLQVNAKGDTPLHL 103 (181)
Q Consensus 24 ~~~t~l~~a~~~g~~~~~~~ll~~~~~~~~~~~~g~t~Lh~a~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~g~t~L~~ 103 (181)
.|.||||+|+..|+.+++++|++.|++++..+..|.||||+| +..|+.+++++|++. +++++.++..|.||||+
T Consensus 2 ~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A--~~~g~~~~v~~Ll~~----g~~~~~~~~~g~t~L~~ 75 (261)
T 2xai_A 2 SDWSPMHEAAIHGHQLSLRNLISQGWAVNIITADHVSPLHEA--CLGGHLSCVKILLKH----GAQVNGVTADWHTPLFN 75 (261)
T ss_dssp --CCHHHHHHHHTCHHHHHHHHHTTCCSSCCCTTCCCHHHHH--HHHTCHHHHHHHHHT----TCCTTCCCTTSCCHHHH
T ss_pred CCCCHHHHHHHcCCHHHHHHHHHCCCCCCCcCCCCCCHHHHH--HHcCCHHHHHHHHHC----CCCCCCCCCCCCCHHHH
Confidence 356777777777777777777777666666666777777777 777777777777665 66677777777777777
Q ss_pred HHHcCCHHHHHHHHHhhhhccCCCCCCcchHHHH---------------HHHhhcccCCCchHHHHHHHcCCHHHHHHHH
Q 041785 104 AAKYSHFDIVRVLIERAQLAQHGDEEPESGIEAF---------------RQMIRMVNNEKNTALHEAVSHGNVEVVKILT 168 (181)
Q Consensus 104 a~~~~~~~~~~~L~~~~~~~~~~~~~~~~~~~~~---------------~~~~~~~~~~g~t~l~~A~~~~~~~~~~~Ll 168 (181)
|+..|+.+++++|++.|+++..... +....... +.+++.++..|+||||+|+..|+.+++++|+
T Consensus 76 A~~~~~~~~v~~Ll~~g~~~~~~~~-g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll 154 (261)
T 2xai_A 76 ACVSGSWDCVNLLLQHGASVQPESD-LASPIHEAARRGHVECVNSLIAYGGNIDHKISHLGTPLYLACENQQRACVKKLL 154 (261)
T ss_dssp HHHHTCHHHHHHHHHTTCCSSCSCT-TCCHHHHHHHTTCHHHHHHHHHTTCCTTCCBTTTBCHHHHHHHTTCHHHHHHHH
T ss_pred HHHcCCHHHHHHHHHCCCCCCCCCC-CCCHHHHHHHcCcHHHHHHHHHcCCCCCcCCCCCCCHHHHHHHhCCHHHHHHHH
Confidence 7777777777777777665532111 11111110 1234778889999999999999999999999
Q ss_pred HcCCCCCC
Q 041785 169 REDPDYPY 176 (181)
Q Consensus 169 ~~g~~~~~ 176 (181)
++|++++.
T Consensus 155 ~~g~~~~~ 162 (261)
T 2xai_A 155 ESGADVNQ 162 (261)
T ss_dssp HHTCCTTC
T ss_pred HcCCCCCC
Confidence 99999875
No 42
>2rfa_A Transient receptor potential cation channel subfa member 6; TRPV6, ankyrin reapeat, ANK RE calcium channel, calcium transport, calmodulin-binding; 1.70A {Mus musculus}
Probab=99.94 E-value=1.8e-26 Score=162.65 Aligned_cols=131 Identities=22% Similarity=0.178 Sum_probs=120.0
Q ss_pred cccCCCHHHHHHHHcCCcHHHHHHHHHhccc-----ccccCCCCchhHHHHhhhhhhhhHHHHHHHHHhhcccccccccc
Q 041785 21 KQSQMDPNLFKAAADGSVEPFKDMAREVIES-----SLTVHTKNTILHINIICQETENASTKFVEEILEICPALLLQVNA 95 (181)
Q Consensus 21 ~~~~~~t~l~~a~~~g~~~~~~~ll~~~~~~-----~~~~~~g~t~Lh~a~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~ 95 (181)
....|.||||+|+..|+.+++++|++.+.+. ...+..|.||||+| +..++.+++++|++. +++++.++.
T Consensus 33 ~~~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~g~t~L~~A--~~~~~~~~v~~Ll~~----g~~~~~~~~ 106 (232)
T 2rfa_A 33 RGAMGETALHIAALYDNLEAAMVLMEAAPELVFEPMTSELYEGQTALHIA--VINQNVNLVRALLAR----GASVSARAT 106 (232)
T ss_dssp CCTTSCCHHHHHHHTTCHHHHHHHHHHCGGGGGCCCCSTTTTTCCHHHHH--HHTTCHHHHHHHHHT----TCCTTCCCC
T ss_pred CCCCCCCHHHHHHHcCCHHHHHHHHHcCchhccccccccCCCCcCHHHHH--HHcCCHHHHHHHHhC----CCCCCcccC
Confidence 3567899999999999999999999998876 45677899999999 999999999999997 888887765
Q ss_pred -------------CCCcHHHHHHHcCCHHHHHHHHHhhhhccCCCCCCcchHHHHHHHhhcccCCCchHHHHHHHcCCHH
Q 041785 96 -------------KGDTPLHLAAKYSHFDIVRVLIERAQLAQHGDEEPESGIEAFRQMIRMVNNEKNTALHEAVSHGNVE 162 (181)
Q Consensus 96 -------------~g~t~L~~a~~~~~~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~t~l~~A~~~~~~~ 162 (181)
.|.||||+|+..|+.+++++|++.|+++ +.+|..|+||||+|+..++.+
T Consensus 107 ~~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~------------------~~~d~~g~t~L~~A~~~~~~~ 168 (232)
T 2rfa_A 107 GSVFHYRPHNLIYYGEHPLSFAACVGSEEIVRLLIEHGADI------------------RAQDSLGNTVLHILILQPNKT 168 (232)
T ss_dssp SGGGSCCTTCSCCCCSSHHHHHHHHTCHHHHHHHHHTTCCT------------------TCCCTTSCCHHHHHHTCSCHH
T ss_pred CcceeecccccccCCCCHHHHHHHcCCHHHHHHHHHCCCCC------------------CCCCCCCCCHHHHHHHcCChH
Confidence 7999999999999999999999999988 899999999999999999999
Q ss_pred HH----HHHHHcCCCCC
Q 041785 163 VV----KILTREDPDYP 175 (181)
Q Consensus 163 ~~----~~Ll~~g~~~~ 175 (181)
++ ++|+++|++..
T Consensus 169 ~~~~i~~~Ll~~g~~~~ 185 (232)
T 2rfa_A 169 FACQMYNLLLSYDGGDH 185 (232)
T ss_dssp HHHHHHHHHHHTTCSCS
T ss_pred HHHHHHHHHHhcCCchh
Confidence 88 99999999874
No 43
>2etb_A Transient receptor potential cation channel subfamily V member 2; TRPV2, ankyrin repeat domain, transport protein; 1.65A {Rattus norvegicus} PDB: 2eta_A 2etc_A 2f37_A
Probab=99.94 E-value=5e-27 Score=167.87 Aligned_cols=135 Identities=17% Similarity=0.143 Sum_probs=119.9
Q ss_pred cCCCHHHHHHHHcCCcHHHHHHHHHhcccccccCC-------------CCchhHHHHhhhhhhhhHHHHHHH---HHhhc
Q 041785 23 SQMDPNLFKAAADGSVEPFKDMAREVIESSLTVHT-------------KNTILHINIICQETENASTKFVEE---ILEIC 86 (181)
Q Consensus 23 ~~~~t~l~~a~~~g~~~~~~~ll~~~~~~~~~~~~-------------g~t~Lh~a~~~~~~~~~~~~~l~~---~~~~~ 86 (181)
..|.||||+|+..|+.++++.|++.|++++..+.. |.||||+| +..++.+++++|++ .
T Consensus 88 ~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~~~~~~~~~~~~~~~~~~g~tpL~~A--~~~~~~~~v~~Ll~~~~~---- 161 (256)
T 2etb_A 88 YQGHSALHIAIEKRSLQCVKLLVENGADVHLRACGRFFQKHQGTCFYFGELPLSLA--ACTKQWDVVTYLLENPHQ---- 161 (256)
T ss_dssp TTTCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCCSGGGSCCSSSCCCSCSSHHHHH--HHTTCHHHHHHHHHCSSC----
T ss_pred ccCCCHHHHHHHcCCHHHHHHHHHcCCCCCcccccccccccccccccCCCCHHHHH--HHcCCHHHHHHHHhcccc----
Confidence 56999999999999999999999999999877776 99999999 99999999999999 7
Q ss_pred cccccccccCCCcHHHHHHH--cCCHH-------HHHHHHHhhhhccCCCCCCcchHHHHHHHhhcccCCCchHHHHHHH
Q 041785 87 PALLLQVNAKGDTPLHLAAK--YSHFD-------IVRVLIERAQLAQHGDEEPESGIEAFRQMIRMVNNEKNTALHEAVS 157 (181)
Q Consensus 87 ~~~~~~~~~~g~t~L~~a~~--~~~~~-------~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~t~l~~A~~ 157 (181)
|++++.+|..|+||||+|+. .++.+ ++++|++.|+++.... ...+.+|..|+||||+|+.
T Consensus 162 ga~~n~~d~~g~TpLh~A~~~~~~~~~~~~~~~~iv~~Ll~~ga~~~~~~-----------~~~~~~d~~g~tpL~~A~~ 230 (256)
T 2etb_A 162 PASLEATDSLGNTVLHALVMIADNSPENSALVIHMYDGLLQMGARLCPTV-----------QLEEISNHQGLTPLKLAAK 230 (256)
T ss_dssp CCCTTCCCTTSCCHHHHHHHHCCSCHHHHHHHHHHHHHHHHHHHHHSTTC-----------CGGGCCCTTSCCHHHHHHH
T ss_pred CCCcCccCCCCCCHHHHHHHcccCCchhhHHHHHHHHHHHHcCCCccccc-----------ccccccCCCCCCHHHHHHH
Confidence 89999999999999999999 78888 9999999998761100 0016789999999999999
Q ss_pred cCCHHHHHHHHHcCCCC
Q 041785 158 HGNVEVVKILTREDPDY 174 (181)
Q Consensus 158 ~~~~~~~~~Ll~~g~~~ 174 (181)
.|+.+++++|+++|++.
T Consensus 231 ~g~~~~v~~Ll~~g~~~ 247 (256)
T 2etb_A 231 EGKIEIFRHILQREFSG 247 (256)
T ss_dssp TTCHHHHHHHHHHHHHH
T ss_pred hCCHHHHHHHHhCCCCC
Confidence 99999999999998754
No 44
>3jxi_A Vanilloid receptor-related osmotically activated protein; ankyrin repeats, ANK repeat, ION transport, ionic channel, R transmembrane, transport; 2.30A {Gallus gallus} PDB: 3jxj_A 4dx1_A 4dx2_A*
Probab=99.94 E-value=2.6e-27 Score=169.65 Aligned_cols=136 Identities=13% Similarity=0.134 Sum_probs=120.5
Q ss_pred cCCCHHHHHHHHcCCcHHHHHHHHHhccccccc--------------CCCCchhHHHHhhhhhhhhHHHHHHH---HHhh
Q 041785 23 SQMDPNLFKAAADGSVEPFKDMAREVIESSLTV--------------HTKNTILHINIICQETENASTKFVEE---ILEI 85 (181)
Q Consensus 23 ~~~~t~l~~a~~~g~~~~~~~ll~~~~~~~~~~--------------~~g~t~Lh~a~~~~~~~~~~~~~l~~---~~~~ 85 (181)
..|.||||+|+..|+.++++.|++.|++++..+ ..|.||||+| +..++.+++++|++ .
T Consensus 91 ~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~~~~~~~~~~~~~~~~~~~g~tpL~~A--~~~g~~~~v~~Ll~~~~~--- 165 (260)
T 3jxi_A 91 YRGQTALHIAIERRCKHYVELLVEKGADVHAQARGRFFQPKDEGGYFYFGELPLSLA--ACTNQPHIVHYLTENGHK--- 165 (260)
T ss_dssp EESBCHHHHHHHTTCHHHHHHHHHTTCCTTCCCEECCCSSSCCCCSCCSCSSHHHHH--HHTTCHHHHHHHHHCSSC---
T ss_pred cCCCCHHHHHHHcCCHHHHHHHHhCCCCcCccccccccCcccccccccCCCCHHHHH--HHcCCHHHHHHHHhcccc---
Confidence 378999999999999999999999999998777 6899999999 99999999999999 7
Q ss_pred ccccccccccCCCcHHHHHHHcCC---------HHHHHHHHHhhhhccCCCCCCcchHHHHHHHhhcccCCCchHHHHHH
Q 041785 86 CPALLLQVNAKGDTPLHLAAKYSH---------FDIVRVLIERAQLAQHGDEEPESGIEAFRQMIRMVNNEKNTALHEAV 156 (181)
Q Consensus 86 ~~~~~~~~~~~g~t~L~~a~~~~~---------~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~t~l~~A~ 156 (181)
+++++.+|..|+||||+|+..++ .+++++|++.|+++..... ..+.+|..|+||||+|+
T Consensus 166 -ga~~~~~d~~g~TpLh~A~~~~~~~~~~~~~~~~~v~~Ll~~ga~~~~~~~-----------~~~~~d~~g~tpL~~A~ 233 (260)
T 3jxi_A 166 -QADLRRQDSRGNTVLHALVAIADNTRENTKFVTKMYDLLLIKCAKLFPDTN-----------LEALLNNDGLSPLMMAA 233 (260)
T ss_dssp -CCCTTCCCTTSCCHHHHHHHHCCSSHHHHHHHHHHHHHHHHHHHHHCTTCC-----------GGGCCCTTSCCHHHHHH
T ss_pred -CCCCcccCCCCCcHHHHHHHhccCchhHHHHHHHHHHHHHHhCcccccccc-----------hhhcccCCCCCHHHHHH
Confidence 89999999999999999998887 7899999999988611100 01568999999999999
Q ss_pred HcCCHHHHHHHHHcCCCCC
Q 041785 157 SHGNVEVVKILTREDPDYP 175 (181)
Q Consensus 157 ~~~~~~~~~~Ll~~g~~~~ 175 (181)
..|+.+++++|+++|++..
T Consensus 234 ~~g~~~~v~~Ll~~g~~~~ 252 (260)
T 3jxi_A 234 KTGKIGIFQHIIRREIADA 252 (260)
T ss_dssp HTTCHHHHHHHHHHHHHHH
T ss_pred HcCCHHHHHHHHHhCCCcc
Confidence 9999999999999987643
No 45
>3d9h_A CDNA FLJ77766, highly similar to HOMO sapiens ankyrin repeat and SOCS box-containing...; ASB9, ANK repeat, L-shaped, structural protein; 2.20A {Homo sapiens}
Probab=99.94 E-value=1.9e-26 Score=167.63 Aligned_cols=155 Identities=18% Similarity=0.116 Sum_probs=131.9
Q ss_pred CCchhhcccCCCHHHHHHHHcCCcHHHHHHHHHhcccccccCCCCchhHHHHhhhhhhhhHHHHHHHHHhhccccccccc
Q 041785 15 DSTGEIKQSQMDPNLFKAAADGSVEPFKDMAREVIESSLTVHTKNTILHINIICQETENASTKFVEEILEICPALLLQVN 94 (181)
Q Consensus 15 ~~~~~~~~~~~~t~l~~a~~~g~~~~~~~ll~~~~~~~~~~~~g~t~Lh~a~~~~~~~~~~~~~l~~~~~~~~~~~~~~~ 94 (181)
..........|.||||+|+..|+.+++++|++.|.+++.++..|.||||+| +..++.+++++|++. +++++.++
T Consensus 49 ~~~~~~~~~~g~t~L~~Aa~~g~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A--~~~g~~~~v~~Ll~~----ga~~~~~~ 122 (285)
T 3d9h_A 49 SNPLMGDAVSDWSPMHEAAIHGHQLSLRNLISQGWAVNIITADHVSPLHEA--CLGGHLSCVKILLKH----GAQVNGVT 122 (285)
T ss_dssp CCTTCSSSCCSCCHHHHHHHTTCHHHHHHHHHTTCCSCEECTTCCCHHHHH--HHTTCHHHHHHHHHT----TCCSSCCC
T ss_pred hCcccCCCccCCCHHHHHHHcCCHHHHHHHHHCCCCCCCcCCCCCCHHHHH--HHCCcHHHHHHHHHC----CCCCCCCC
Confidence 333445677899999999999999999999999999988999999999999 999999999999997 89999999
Q ss_pred cCCCcHHHHHHHcCCHHHHHHHHHhhhhccCCCCCCcchHHHH---------------HHHhhcccCCCchHHHHHHHcC
Q 041785 95 AKGDTPLHLAAKYSHFDIVRVLIERAQLAQHGDEEPESGIEAF---------------RQMIRMVNNEKNTALHEAVSHG 159 (181)
Q Consensus 95 ~~g~t~L~~a~~~~~~~~~~~L~~~~~~~~~~~~~~~~~~~~~---------------~~~~~~~~~~g~t~l~~A~~~~ 159 (181)
..|.||||+|+..++.+++++|++.|+++..... +....... +.+++.+|..|+||||+|+..|
T Consensus 123 ~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~-g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~d~~g~t~L~~A~~~~ 201 (285)
T 3d9h_A 123 ADWHTPLFNACVSGSWDCVNLLLQHGASVQPESD-LASPIHEAARRGHVECVNSLIAYGGNIDHKISHLGTPLYLACENQ 201 (285)
T ss_dssp TTCCCHHHHHHHHTCHHHHHHHHHTTCCSSCSCT-TSCHHHHHHHHTCHHHHHHHHHTTCCTTCCBTTTBCHHHHHHHTT
T ss_pred CCCCCHHHHHHHcCHHHHHHHHHHCCCCCCCCCC-CCCHHHHHHHcCCHHHHHHHHHCCCCCCCcCCCCCCHHHHHHHcC
Confidence 9999999999999999999999999987743222 22221111 1345678889999999999999
Q ss_pred CHHHHHHHHHcCCCCCC
Q 041785 160 NVEVVKILTREDPDYPY 176 (181)
Q Consensus 160 ~~~~~~~Ll~~g~~~~~ 176 (181)
+.+++++|+++|++++.
T Consensus 202 ~~~~v~~Ll~~ga~~~~ 218 (285)
T 3d9h_A 202 QRACVKKLLESGADVNQ 218 (285)
T ss_dssp CHHHHHHHHHTTCCTTC
T ss_pred cHHHHHHHHHCCCCCCC
Confidence 99999999999999874
No 46
>1k1a_A B-cell lymphoma 3-encoded protein; BCL-3, NF-kappab transcription factors, ikappab proteins; 1.86A {Homo sapiens} SCOP: d.211.1.1 PDB: 1k1b_A
Probab=99.94 E-value=3.1e-26 Score=162.04 Aligned_cols=156 Identities=17% Similarity=0.141 Sum_probs=125.5
Q ss_pred ccCCCHHHHHHHHcCCcHHHHHHHHHhcccccccCCCCchhHHHHhhhhhhhhHHHHHHHHHhhccccccccccCCCcHH
Q 041785 22 QSQMDPNLFKAAADGSVEPFKDMAREVIESSLTVHTKNTILHINIICQETENASTKFVEEILEICPALLLQVNAKGDTPL 101 (181)
Q Consensus 22 ~~~~~t~l~~a~~~g~~~~~~~ll~~~~~~~~~~~~g~t~Lh~a~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~g~t~L 101 (181)
...|.||||+|+..|+.+++++|++.|++++..+..|.||||+| +..++.+++++|++.....+.+++..+..|.|||
T Consensus 43 ~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~l~~A--~~~~~~~~~~~Ll~~~~~~~~~~~~~~~~g~t~L 120 (241)
T 1k1a_A 43 NNLRQTPLHLAVITTLPSVVRLLVTAGASPMALDRHGQTAAHLA--CEHRSPTCLRALLDSAAPGTLDLEARNYDGLTAL 120 (241)
T ss_dssp CTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHH--HHTTCHHHHHHHHHHSCTTSCCTTCCCTTSCCHH
T ss_pred cccCCCHHHHHHHcCCHHHHHHHHHcCCCccccCCCCCCHHHHH--HHcCCHHHHHHHHHcCCCccccccccCcCCCcHH
Confidence 45688999999999999999999999988888888999999999 8999999999998872211227788888899999
Q ss_pred HHHHHcCCHHHHHHHHHhhhhccCCC-CCCcchHHHH---------------HHHhhcccCCCchHHHHHHHcCCHHHHH
Q 041785 102 HLAAKYSHFDIVRVLIERAQLAQHGD-EEPESGIEAF---------------RQMIRMVNNEKNTALHEAVSHGNVEVVK 165 (181)
Q Consensus 102 ~~a~~~~~~~~~~~L~~~~~~~~~~~-~~~~~~~~~~---------------~~~~~~~~~~g~t~l~~A~~~~~~~~~~ 165 (181)
|+|+..++.+++++|++.|.++...+ ..+....... +.+++.+|..|+||||+|+..|+.++++
T Consensus 121 ~~A~~~~~~~~~~~Ll~~g~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~ 200 (241)
T 1k1a_A 121 HVAVNTECQETVQLLLERGADIDAVDIKSGRSPLIHAVENNSLSMVQLLLQHGANVNAQMYSGSSALHSASGRGLLPLVR 200 (241)
T ss_dssp HHHHHHTCHHHHHHHHHTTCCTTCCCTTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCBCTTSCBHHHHHHHHTCHHHHH
T ss_pred HHHHHcCCHHHHHHHHHcCCCcccccccCCCcHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHcCCHHHHH
Confidence 99999999999999999888775444 2333332221 2346778889999999999999999999
Q ss_pred HHHHcCCCCCCCcC
Q 041785 166 ILTREDPDYPYSAN 179 (181)
Q Consensus 166 ~Ll~~g~~~~~~~~ 179 (181)
+|+++|++++..+.
T Consensus 201 ~Ll~~ga~~~~~~~ 214 (241)
T 1k1a_A 201 TLVRSGADSSLKNC 214 (241)
T ss_dssp HHHHTTCCTTCCCT
T ss_pred HHHhcCCCCCCcCC
Confidence 99999999887764
No 47
>3kea_A K1L; tropism, ANK repeat, viral protein; 2.30A {Vaccinia virus}
Probab=99.94 E-value=1.1e-26 Score=168.81 Aligned_cols=148 Identities=14% Similarity=0.081 Sum_probs=82.4
Q ss_pred cCCCHHHHHHHHcCCcHHHHHHHHHhcccccccCCCCchhHHHHhhhhhhhhHHHHHHHHHhhccccccccccCCCcHHH
Q 041785 23 SQMDPNLFKAAADGSVEPFKDMAREVIESSLTVHTKNTILHINIICQETENASTKFVEEILEICPALLLQVNAKGDTPLH 102 (181)
Q Consensus 23 ~~~~t~l~~a~~~g~~~~~~~ll~~~~~~~~~~~~g~t~Lh~a~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~g~t~L~ 102 (181)
..|.||||+|+..|+.+++++|++.|++++.. +|.||||+| +..++.+++++|++. |++++.++..|+||||
T Consensus 29 ~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~--~g~t~L~~A--~~~g~~~~v~~Ll~~----ga~~~~~d~~g~t~L~ 100 (285)
T 3kea_A 29 VHGHSASYYAIADNNVRLVCTLLNAGALKNLL--ENEFPLHQA--ATLEDTKIVKILLFS----GLDDSQFDDKGNTALY 100 (285)
T ss_dssp TTSCCHHHHHHHTTCHHHHHHHHHTTGGGSCC--TTCCHHHHH--TTSSSCHHHHHHHHT----TCCTTCCCTTSCCHHH
T ss_pred CCCCCHHHHHHHcCCHHHHHHHHhCCCCCCCC--CCCCHHHHH--HHcCCHHHHHHHHHC----CCCCCCcCCCCCcHHH
Confidence 34555555555555555555555555554333 355555555 555555555555554 5555555555555555
Q ss_pred HHHHcCCHHHHHHHHHhhhhccCCCCCC-c-----------------------------chHHHH---------------
Q 041785 103 LAAKYSHFDIVRVLIERAQLAQHGDEEP-E-----------------------------SGIEAF--------------- 137 (181)
Q Consensus 103 ~a~~~~~~~~~~~L~~~~~~~~~~~~~~-~-----------------------------~~~~~~--------------- 137 (181)
+|+..|+.+++++|++.|+++...+..+ . .+.+++
T Consensus 101 ~A~~~g~~~~v~~Ll~~ga~~~~~~~~g~~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~g~t~L~~A~~~g~~~~v~~L 180 (285)
T 3kea_A 101 YAVDSGNMQTVKLFVKKNWRLMFYGKTGWKTSFYHAVMLNDVSIVSYFLSEIPSTFDLAILLSCIHITIKNGHVDMMILL 180 (285)
T ss_dssp HHHHTTCHHHHHHHHHHCGGGGGCSSSGGGSHHHHHHHTTCHHHHHHHHTTSCTTCCCSTHHHHHHHHHHTTCHHHHHHH
T ss_pred HHHHcCCHHHHHHHHhcCCCCCccCCCCCCCHHHHHHHcCCHHHHHHHHhCCCccccccCCccHHHHHHHcChHHHHHHH
Confidence 5555555555555555555443222222 1 111111
Q ss_pred ---HHHhhcccCCCchH-HHHHHHcCCHHHHHHHHHcCCCCCCCc
Q 041785 138 ---RQMIRMVNNEKNTA-LHEAVSHGNVEVVKILTREDPDYPYSA 178 (181)
Q Consensus 138 ---~~~~~~~~~~g~t~-l~~A~~~~~~~~~~~Ll~~g~~~~~~~ 178 (181)
+.+++.++..|+|| ||+|+..|+.+++++|+++|++++..+
T Consensus 181 l~~gad~n~~~~~g~t~~L~~A~~~~~~~~v~~Ll~~gad~~~~~ 225 (285)
T 3kea_A 181 LDYMTSTNTNNSLLFIPDIKLAIDNKDIEMLQALFKYDINIYSAN 225 (285)
T ss_dssp HHHHHHTCTTCCCBCCTTHHHHHHHTCHHHHHHHTTSCBCSTTTT
T ss_pred HHcCCCCCcccCCCCChHHHHHHHcCCHHHHHHHHHcCCCCCCCC
Confidence 34566777777776 777777777777777777777776654
No 48
>1bd8_A P19INK4D CDK4/6 inhibitor; tumor suppressor, ankyrin motif; 1.80A {Homo sapiens} SCOP: d.211.1.1 PDB: 1bi8_B 1ap7_A 1blx_B
Probab=99.94 E-value=1.1e-26 Score=154.29 Aligned_cols=124 Identities=18% Similarity=0.138 Sum_probs=116.0
Q ss_pred cccCCCHHHHHHHHcCCcHHHHHHHHHhcccccccCCCCchhHHHHhhhhhhhhHHHHHHHHHhhccccccccccCCCcH
Q 041785 21 KQSQMDPNLFKAAADGSVEPFKDMAREVIESSLTVHTKNTILHINIICQETENASTKFVEEILEICPALLLQVNAKGDTP 100 (181)
Q Consensus 21 ~~~~~~t~l~~a~~~g~~~~~~~ll~~~~~~~~~~~~g~t~Lh~a~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~g~t~ 100 (181)
....|.||||+ +..|+.+++++|++.|++++.++..|.||||+| +..++.+++++|++. |++++.++..|.||
T Consensus 32 ~~~~g~t~L~~-~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A--~~~~~~~~v~~Ll~~----g~~~~~~~~~g~t~ 104 (156)
T 1bd8_A 32 LNRFGKTALQV-MMFGSTAIALELLKQGASPNVQDTSGTSPVHDA--ARTGFLDTLKVLVEH----GADVNVPDGTGALP 104 (156)
T ss_dssp CCTTSCCHHHH-SCTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHH--HHTTCHHHHHHHHHT----TCCSCCCCTTSCCH
T ss_pred cCCCCCcHHHH-HHcCCHHHHHHHHHCCCCCCCcCCCCCCHHHHH--HHcCcHHHHHHHHHc----CCCCCCcCCCCCcH
Confidence 34568999999 999999999999999999998999999999999 999999999999997 89999999999999
Q ss_pred HHHHHHcCCHHHHHHHHHhhhhccCCCCCCcchHHHHHHHhhcccCCCchHHHHHHHcCCHHHHHHHHHc
Q 041785 101 LHLAAKYSHFDIVRVLIERAQLAQHGDEEPESGIEAFRQMIRMVNNEKNTALHEAVSHGNVEVVKILTRE 170 (181)
Q Consensus 101 L~~a~~~~~~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~t~l~~A~~~~~~~~~~~Ll~~ 170 (181)
||+|+..++.+++++|++. +++ +.+|..|.|||++|+..|+.+++++|+++
T Consensus 105 L~~A~~~~~~~~v~~Ll~~-~~~------------------~~~~~~g~t~l~~A~~~~~~~~v~~Ll~~ 155 (156)
T 1bd8_A 105 IHLAVQEGHTAVVSFLAAE-SDL------------------HRRDARGLTPLELALQRGAQDLVDILQGH 155 (156)
T ss_dssp HHHHHHHTCHHHHHHHHTT-SCT------------------TCCCTTSCCHHHHHHHSCCHHHHHHHHTT
T ss_pred HHHHHHhChHHHHHHHHhc-cCC------------------CCcCCCCCCHHHHHHHcCcHHHHHHHHhh
Confidence 9999999999999999998 666 88999999999999999999999999864
No 49
>3utm_A Tankyrase-1; tankyrase, TNKS, ankryin repeat clusters, WNT signaling, POL ribosylation, transferase-signaling protein complex; 2.00A {Mus musculus}
Probab=99.94 E-value=4e-26 Score=169.38 Aligned_cols=39 Identities=21% Similarity=0.287 Sum_probs=34.6
Q ss_pred hhcccCCCchHHHHHHHcCCHHHHHHHHHcCCCCCCCcC
Q 041785 141 IRMVNNEKNTALHEAVSHGNVEVVKILTREDPDYPYSAN 179 (181)
Q Consensus 141 ~~~~~~~g~t~l~~A~~~~~~~~~~~Ll~~g~~~~~~~~ 179 (181)
++.+|..|+||||+|+..|+.+++++|+++|++++..++
T Consensus 273 ~n~~d~~g~t~L~~A~~~~~~~~v~~Ll~~gad~~~~~~ 311 (351)
T 3utm_A 273 MNALDSLGQTALHRAALAGHLQTCRLLLSYGSDPSIISL 311 (351)
T ss_dssp TTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCTTCCCT
T ss_pred CCCcCCCCCCHHHHHHHcCcHHHHHHHHHcCCCCCCcCC
Confidence 478889999999999999999999999999999888765
No 50
>3b7b_A Euchromatic histone-lysine N-methyltransferase 1; ankyrin repeat, alternative splicing, ANK repeat, chromatin regulator, nucleus, phosphorylation; 2.99A {Homo sapiens} SCOP: k.37.1.1 PDB: 3b95_A*
Probab=99.94 E-value=2.2e-26 Score=162.56 Aligned_cols=153 Identities=18% Similarity=0.225 Sum_probs=120.4
Q ss_pred ccCCCHHHHHHHHcCCcHHHHHHHHHhcccccccCCCCchhHHHHhhhhhhhhHHHHHHHHHhhccccccccccCCCcHH
Q 041785 22 QSQMDPNLFKAAADGSVEPFKDMAREVIESSLTVHTKNTILHINIICQETENASTKFVEEILEICPALLLQVNAKGDTPL 101 (181)
Q Consensus 22 ~~~~~t~l~~a~~~g~~~~~~~ll~~~~~~~~~~~~g~t~Lh~a~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~g~t~L 101 (181)
...|.||||+|+..|+.+++++|++.|.+++..+..|.||||+| +..++.+++++|++. .+.+++..+..|.|||
T Consensus 41 ~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A--~~~~~~~~~~~Ll~~---~~~~~~~~~~~g~t~L 115 (237)
T 3b7b_A 41 SEDQRTPLMEAAENNHLEAVKYLIKAGALVDPKDAEGSTCLHLA--AKKGHYEVVQYLLSN---GQMDVNCQDDGGWTPM 115 (237)
T ss_dssp CTTCCCHHHHHHHTTCHHHHHHHHTTTCCCCCCCTTSCCHHHHH--HHTTCHHHHHHHHTT---TCCCTTCCCTTSCCHH
T ss_pred CCCCCCHHHHHHHhCCHHHHHHHHhCCCCCCCCCCCCCcHHHHH--HHcCCHHHHHHHHhC---CCCCcccCCCCCCCHH
Confidence 34677888888888888888888888887777788888888888 888888888888776 2267777788888888
Q ss_pred HHHHHcCCHHHHHHHHHhhhhccCCCCCCcchHHHH---------------HHHhhcccCCCchHHHHHHHcCCHHHHHH
Q 041785 102 HLAAKYSHFDIVRVLIERAQLAQHGDEEPESGIEAF---------------RQMIRMVNNEKNTALHEAVSHGNVEVVKI 166 (181)
Q Consensus 102 ~~a~~~~~~~~~~~L~~~~~~~~~~~~~~~~~~~~~---------------~~~~~~~~~~g~t~l~~A~~~~~~~~~~~ 166 (181)
|+|+..++.+++++|++.|+++...+..+....... +.+++.+|..|.||||+|+..++.+++++
T Consensus 116 ~~A~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~ 195 (237)
T 3b7b_A 116 IWATEYKHVDLVKLLLSKGSDINIRDNEENICLHWAAFSGCVDIAEILLAAKCDLHAVNIHGDSPLHIAARENRYDCVVL 195 (237)
T ss_dssp HHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHHCCHHHHHHHHTTTCCTTCCCTTCCCHHHHHHHTTCHHHHHH
T ss_pred HHHHHcCCHHHHHHHHHCCCCCCccCCCCCCHHHHHHHCCCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHhCCHhHHHH
Confidence 888888888888888888877755544444433222 13457788899999999999999999999
Q ss_pred HHHcCCCCCCCcC
Q 041785 167 LTREDPDYPYSAN 179 (181)
Q Consensus 167 Ll~~g~~~~~~~~ 179 (181)
|+++|++++.++.
T Consensus 196 Ll~~gad~~~~d~ 208 (237)
T 3b7b_A 196 FLSRDSDVTLKNK 208 (237)
T ss_dssp HHTTTCCTTCCCT
T ss_pred HHHcCCCCCccCC
Confidence 9999999987764
No 51
>1k1a_A B-cell lymphoma 3-encoded protein; BCL-3, NF-kappab transcription factors, ikappab proteins; 1.86A {Homo sapiens} SCOP: d.211.1.1 PDB: 1k1b_A
Probab=99.94 E-value=5.4e-26 Score=160.78 Aligned_cols=154 Identities=16% Similarity=0.196 Sum_probs=126.2
Q ss_pred hcccCCCHHHHHHHHcCCcHHHHHHHH----HhcccccccCCCCchhHHHHhhhhhhhhHHHHHHHHHhhcccccccccc
Q 041785 20 IKQSQMDPNLFKAAADGSVEPFKDMAR----EVIESSLTVHTKNTILHINIICQETENASTKFVEEILEICPALLLQVNA 95 (181)
Q Consensus 20 ~~~~~~~t~l~~a~~~g~~~~~~~ll~----~~~~~~~~~~~g~t~Lh~a~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~ 95 (181)
.....|.||||+|+..|+.+++++|++ .+.+.+..+..|.||||+| +..++.+++++|++. +.+++.++.
T Consensus 4 ~~d~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~g~t~L~~A--~~~~~~~~v~~Ll~~----g~~~~~~~~ 77 (241)
T 1k1a_A 4 RADEDGDTPLHIAVVQGNLPAVHRLVNLFQQGGRELDIYNNLRQTPLHLA--VITTLPSVVRLLVTA----GASPMALDR 77 (241)
T ss_dssp ---CTTCCHHHHHHHTTCHHHHHHHHHHHHHTTCCSCCCCTTSCCHHHHH--HHTTCHHHHHHHHHT----TCCTTCCCT
T ss_pred ccCCCCCcHHHHHHHcCCHHHHHHHHHHHHhcCCCCCcccccCCCHHHHH--HHcCCHHHHHHHHHc----CCCccccCC
Confidence 345689999999999999999999997 5777778899999999999 999999999999997 899999999
Q ss_pred CCCcHHHHHHHcCCHHHHHHHHHhhh----hccCCCCCCcchHHHH---------------HHHhhccc-CCCchHHHHH
Q 041785 96 KGDTPLHLAAKYSHFDIVRVLIERAQ----LAQHGDEEPESGIEAF---------------RQMIRMVN-NEKNTALHEA 155 (181)
Q Consensus 96 ~g~t~L~~a~~~~~~~~~~~L~~~~~----~~~~~~~~~~~~~~~~---------------~~~~~~~~-~~g~t~l~~A 155 (181)
.|.||||+|+..++.+++++|++.+. ++...+..+....... +.+++..+ ..|.||||+|
T Consensus 78 ~g~t~l~~A~~~~~~~~~~~Ll~~~~~~~~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~~g~t~L~~A 157 (241)
T 1k1a_A 78 HGQTAAHLACEHRSPTCLRALLDSAAPGTLDLEARNYDGLTALHVAVNTECQETVQLLLERGADIDAVDIKSGRSPLIHA 157 (241)
T ss_dssp TSCCHHHHHHHTTCHHHHHHHHHHSCTTSCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTTCCCHHHHH
T ss_pred CCCCHHHHHHHcCCHHHHHHHHHcCCCccccccccCcCCCcHHHHHHHcCCHHHHHHHHHcCCCcccccccCCCcHHHHH
Confidence 99999999999999999999999987 4433333333332221 12344555 6789999999
Q ss_pred HHcCCHHHHHHHHHcCCCCCCCcC
Q 041785 156 VSHGNVEVVKILTREDPDYPYSAN 179 (181)
Q Consensus 156 ~~~~~~~~~~~Ll~~g~~~~~~~~ 179 (181)
+..|+.+++++|+++|++++..+.
T Consensus 158 ~~~~~~~~v~~Ll~~g~~~~~~~~ 181 (241)
T 1k1a_A 158 VENNSLSMVQLLLQHGANVNAQMY 181 (241)
T ss_dssp HHTTCHHHHHHHHHTTCCTTCBCT
T ss_pred HHcCCHHHHHHHHHcCCCCCCcCC
Confidence 999999999999999999887654
No 52
>3c5r_A BARD-1, BRCA1-associated ring domain protein 1; ankyrin repeat, helix, extended loop, four repeat, PR ANK repeat, disease mutation, metal-binding; 2.00A {Homo sapiens} SCOP: k.37.1.1
Probab=99.94 E-value=9.6e-28 Score=156.38 Aligned_cols=129 Identities=19% Similarity=0.232 Sum_probs=116.5
Q ss_pred cccCCCHHHHHHHHcCCcHHHHHHHHHhcccccccCCCCchhHHHHhhhhhhhhHHHHHHHHHhhccccccccccCCCcH
Q 041785 21 KQSQMDPNLFKAAADGSVEPFKDMAREVIESSLTVHTKNTILHINIICQETENASTKFVEEILEICPALLLQVNAKGDTP 100 (181)
Q Consensus 21 ~~~~~~t~l~~a~~~g~~~~~~~ll~~~~~~~~~~~~g~t~Lh~a~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~g~t~ 100 (181)
....|.||||+|+..|+.+++++|++.|.+++.++..|.||||+| +..++.+++++|++. +.+++.++..|.||
T Consensus 6 ~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~L~~A--~~~~~~~~~~~Ll~~----g~~~~~~~~~g~t~ 79 (137)
T 3c5r_A 6 TNHRGETLLHIASIKGDIPSVEYLLQNGSDPNVKDHAGWTPLHEA--CNHGHLKVVELLLQH----KALVNTTGYQNDSP 79 (137)
T ss_dssp CCTTCCCHHHHHHHHTCHHHHHHHHHTTCCSCCCCTTSCCHHHHH--HHTTCHHHHHHHHHT----TCCTTCCCGGGCCH
T ss_pred cCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCcCCCCCCCHHHHH--HHcCCHHHHHHHHHc----CCcccCcCCCCCCH
Confidence 345789999999999999999999999999988999999999999 999999999999987 99999999999999
Q ss_pred HHHHHHcCCHHHHHHHHHhhhhccCCCCCCcchHHHHHHHhhcccCCCchHHHHHHHcCCHHHHHHHHHcCCC
Q 041785 101 LHLAAKYSHFDIVRVLIERAQLAQHGDEEPESGIEAFRQMIRMVNNEKNTALHEAVSHGNVEVVKILTREDPD 173 (181)
Q Consensus 101 L~~a~~~~~~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~t~l~~A~~~~~~~~~~~Ll~~g~~ 173 (181)
||+|+..++.+++++|++.|+++ +.+|..|.||+++|+..+..+++++|.+.+..
T Consensus 80 L~~A~~~~~~~~v~~Ll~~ga~~------------------~~~~~~g~tpl~~A~~~~~~~~l~~l~~~~~s 134 (137)
T 3c5r_A 80 LHDAAKNGHVDIVKLLLSYGASR------------------NAVNIFGLRPVDYTDDESMKSLLLLPEKNESS 134 (137)
T ss_dssp HHHHHHTTCHHHHHHHHHTTCCT------------------TCCCTTSCCGGGGCCCHHHHHHHSCC------
T ss_pred HHHHHHcCCHHHHHHHHHcCCCC------------------CCCCCCCCCHHHHHhhccHHHHHhhccccccC
Confidence 99999999999999999999988 89999999999999999999998888776554
No 53
>3utm_A Tankyrase-1; tankyrase, TNKS, ankryin repeat clusters, WNT signaling, POL ribosylation, transferase-signaling protein complex; 2.00A {Mus musculus}
Probab=99.94 E-value=1.2e-26 Score=172.25 Aligned_cols=153 Identities=16% Similarity=0.133 Sum_probs=131.5
Q ss_pred cccCCCHHHHHHHHcCCcHHHHHHHHHhcccccccCCCCchhHHHHhhhhhhhhHHHHHHHHHhhccccccccccCCCcH
Q 041785 21 KQSQMDPNLFKAAADGSVEPFKDMAREVIESSLTVHTKNTILHINIICQETENASTKFVEEILEICPALLLQVNAKGDTP 100 (181)
Q Consensus 21 ~~~~~~t~l~~a~~~g~~~~~~~ll~~~~~~~~~~~~g~t~Lh~a~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~g~t~ 100 (181)
....|.||||+|+..|+.+++++|++.|++++..+..|.||||+| +..++.+++++|++. +++++..+..|.||
T Consensus 54 ~d~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A--~~~g~~~iv~~Ll~~----g~~~~~~~~~g~t~ 127 (351)
T 3utm_A 54 SDGRKSTPLHLAAGYNRVRIVQLLLQHGADVHAKDKGGLVPLHNA--CSYGHYEVTELLLKH----GACVNAMDLWQFTP 127 (351)
T ss_dssp SSTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTCCCHHHHH--HHTTCHHHHHHHHHT----TCCTTCCCTTCCCH
T ss_pred CCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCccCCCCCcHHHHH--HHCCCHHHHHHHHHC----CCCCCCCCCCCCCH
Confidence 345689999999999999999999999999998999999999999 999999999999997 99999999999999
Q ss_pred HHHHHHcCCHHHHHHHHHhhhhccCCCCCCcch-----------------------------------------------
Q 041785 101 LHLAAKYSHFDIVRVLIERAQLAQHGDEEPESG----------------------------------------------- 133 (181)
Q Consensus 101 L~~a~~~~~~~~~~~L~~~~~~~~~~~~~~~~~----------------------------------------------- 133 (181)
||+|+..++.+++++|++.|+++...+..+...
T Consensus 128 L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~ 207 (351)
T 3utm_A 128 LHEAASKNRVEVCSLLLSHGADPTLVNCHGKSAVDMAPTPELRERLTYEFKGHSLLQAAREADLAKVKKTLALEIINFKQ 207 (351)
T ss_dssp HHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHCSSHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHTTTCCTTCCC
T ss_pred HHHHHHcCCHHHHHHHHHcCCCCccccCCCCcchHHHhhhhhHHHHHhhhcccHHHHHHHhccHHHHHHHHHhhcccccC
Confidence 999999999999999999988764333222111
Q ss_pred -------HH------------HH------HHHhhcccCCCchHHHHHHHcCCHHHHHHHHHcCCCCCCCcC
Q 041785 134 -------IE------------AF------RQMIRMVNNEKNTALHEAVSHGNVEVVKILTREDPDYPYSAN 179 (181)
Q Consensus 134 -------~~------------~~------~~~~~~~~~~g~t~l~~A~~~~~~~~~~~Ll~~g~~~~~~~~ 179 (181)
.. .. +.+++.++..|+||||+|+..|+.+++++|+++|++++..+.
T Consensus 208 ~~~~~t~L~~A~~~~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~n~~d~ 278 (351)
T 3utm_A 208 PQSHETALHCAVASLHPKRKQVAELLLRKGANVNEKNKDFMTPLHVAAERAHNDVMEVLHKHGAKMNALDS 278 (351)
T ss_dssp TTTCCCHHHHHHHCCSTTHHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCT
T ss_pred CCCCCCHHHHHHHHhCccHHHHHHHHHHcCCCcCCcCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCCcCC
Confidence 00 01 124567889999999999999999999999999999988764
No 54
>3b7b_A Euchromatic histone-lysine N-methyltransferase 1; ankyrin repeat, alternative splicing, ANK repeat, chromatin regulator, nucleus, phosphorylation; 2.99A {Homo sapiens} SCOP: k.37.1.1 PDB: 3b95_A*
Probab=99.94 E-value=3.5e-26 Score=161.52 Aligned_cols=154 Identities=23% Similarity=0.248 Sum_probs=126.4
Q ss_pred hcccCCCHHHHHHHHcCCcHHHHHHHHHhcccccccCCCCchhHHHHhhhhhhhhHHHHHHHHHhhccccccccccCCCc
Q 041785 20 IKQSQMDPNLFKAAADGSVEPFKDMAREVIESSLTVHTKNTILHINIICQETENASTKFVEEILEICPALLLQVNAKGDT 99 (181)
Q Consensus 20 ~~~~~~~t~l~~a~~~g~~~~~~~ll~~~~~~~~~~~~g~t~Lh~a~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~g~t 99 (181)
.....|.||||+|+..|+.+++++|++.|++++..+..|.||||+| +..++.+++++|++. +.+++.++..|.|
T Consensus 6 ~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A--~~~~~~~~v~~Ll~~----g~~~~~~~~~g~t 79 (237)
T 3b7b_A 6 MEHQNKRSPLHAAAEAGHVDICHMLVQAGANIDTCSEDQRTPLMEA--AENNHLEAVKYLIKA----GALVDPKDAEGST 79 (237)
T ss_dssp CSSCCSCCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTCCCHHHHH--HHTTCHHHHHHHHTT----TCCCCCCCTTSCC
T ss_pred cccCCCCCHHHHHHHcCcHHHHHHHHHcCCCcCccCCCCCCHHHHH--HHhCCHHHHHHHHhC----CCCCCCCCCCCCc
Confidence 3456789999999999999999999999999988899999999999 999999999999986 8999999999999
Q ss_pred HHHHHHHcCCHHHHHHHHHhh-hhccCCCCCCcchHHHH---------------HHHhhcccCCCchHHHHHHHcCCHHH
Q 041785 100 PLHLAAKYSHFDIVRVLIERA-QLAQHGDEEPESGIEAF---------------RQMIRMVNNEKNTALHEAVSHGNVEV 163 (181)
Q Consensus 100 ~L~~a~~~~~~~~~~~L~~~~-~~~~~~~~~~~~~~~~~---------------~~~~~~~~~~g~t~l~~A~~~~~~~~ 163 (181)
|||+|+..++.+++++|++.+ .++...+..+....... +.+++.++..|.||||+|+..|+.++
T Consensus 80 ~L~~A~~~~~~~~~~~Ll~~~~~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~ 159 (237)
T 3b7b_A 80 CLHLAAKKGHYEVVQYLLSNGQMDVNCQDDGGWTPMIWATEYKHVDLVKLLLSKGSDINIRDNEENICLHWAAFSGCVDI 159 (237)
T ss_dssp HHHHHHHTTCHHHHHHHHTTTCCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHHCCHHH
T ss_pred HHHHHHHcCCHHHHHHHHhCCCCCcccCCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCccCCCCCCHHHHHHHCCCHHH
Confidence 999999999999999999998 45533333333322221 12345667778888888888888888
Q ss_pred HHHHHHcCCCCCCCcC
Q 041785 164 VKILTREDPDYPYSAN 179 (181)
Q Consensus 164 ~~~Ll~~g~~~~~~~~ 179 (181)
+++|+++|++++..+.
T Consensus 160 ~~~Ll~~g~~~~~~~~ 175 (237)
T 3b7b_A 160 AEILLAAKCDLHAVNI 175 (237)
T ss_dssp HHHHHTTTCCTTCCCT
T ss_pred HHHHHHcCCCCCCcCC
Confidence 8888888888776653
No 55
>2dzn_A Probable 26S proteasome regulatory subunit P28; ankyrin repeats, A-helical domain, structural genomics, NPPSFA; 2.20A {Saccharomyces cerevisiae} SCOP: d.211.1.1 PDB: 2dzo_A 1ixv_A 1wg0_A
Probab=99.94 E-value=3.6e-26 Score=160.51 Aligned_cols=149 Identities=15% Similarity=0.187 Sum_probs=120.5
Q ss_pred CCHHHHHHHHcCCcHHHHHHHHHhcccc-cccCCCCchhHHHHhhhhhhhhHHHHHHHHHhhcc--ccccc-cccCCCcH
Q 041785 25 MDPNLFKAAADGSVEPFKDMAREVIESS-LTVHTKNTILHINIICQETENASTKFVEEILEICP--ALLLQ-VNAKGDTP 100 (181)
Q Consensus 25 ~~t~l~~a~~~g~~~~~~~ll~~~~~~~-~~~~~g~t~Lh~a~~~~~~~~~~~~~l~~~~~~~~--~~~~~-~~~~g~t~ 100 (181)
|.||||.|+..|+.+++++|++.+.+.. ..+..|.||||+| +..++.+++++|++. + .+++. .+..|.||
T Consensus 2 g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~g~t~L~~A--~~~~~~~~v~~Ll~~----~~~~~~~~~~~~~g~t~ 75 (228)
T 2dzn_A 2 SNYPLHQACMENEFFKVQELLHSKPSLLLQKDQDGRIPLHWS--VSFQAHEITSFLLSK----MENVNLDDYPDDSGWTP 75 (228)
T ss_dssp -CCHHHHHHHTTCHHHHHHHHHHCGGGTTCCCTTSCCHHHHH--HHTTCHHHHHHHHHT----CTTCCGGGCCCTTSCCH
T ss_pred CccHHHHHHHhCCHHHHHHHHhcCccccccCCCCCCCHHHHH--HHcCCHHHHHHHHhc----cccccccccCCCCCCCH
Confidence 5799999999999999999999988776 4789999999999 999999999999997 6 55555 77899999
Q ss_pred HHHHHHcCCHHHHHHHHHhh--hhccCCCCCCcchHHHH---------------HHHhhcccCCCchHHHHHHHcCCHHH
Q 041785 101 LHLAAKYSHFDIVRVLIERA--QLAQHGDEEPESGIEAF---------------RQMIRMVNNEKNTALHEAVSHGNVEV 163 (181)
Q Consensus 101 L~~a~~~~~~~~~~~L~~~~--~~~~~~~~~~~~~~~~~---------------~~~~~~~~~~g~t~l~~A~~~~~~~~ 163 (181)
||+|+..++.+++++|++.| .++...+..+....... +.+++.++..|+||||+|+..|+.++
T Consensus 76 L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~ 155 (228)
T 2dzn_A 76 FHIACSVGNLEVVKSLYDRPLKPDLNKITNQGVTCLHLAVGKKWFEVSQFLIENGASVRIKDKFNQIPLHRAASVGSLKL 155 (228)
T ss_dssp HHHHHHHCCHHHHHHHHSSSSCCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCCSCCCCTTSCCHHHHHHHTTCHHH
T ss_pred HHHHHHcCCHHHHHHHHhCCCCcccccCCcCCCCHHHHHHHcCCHhHHHHHHHcCCCccccCCCCCCHHHHHHHcCCHHH
Confidence 99999999999999999998 55544444443332221 13456677788888888888888888
Q ss_pred HHHHHHcC-CCCCCCcC
Q 041785 164 VKILTRED-PDYPYSAN 179 (181)
Q Consensus 164 ~~~Ll~~g-~~~~~~~~ 179 (181)
+++|+++| ++++..+.
T Consensus 156 v~~Ll~~g~~~~~~~d~ 172 (228)
T 2dzn_A 156 IELLCGLGKSAVNWQDK 172 (228)
T ss_dssp HHHHHTTTCCCSCCCCT
T ss_pred HHHHHhcCcccccCcCC
Confidence 88888888 77776653
No 56
>1n11_A Ankyrin; clathrin, BAND 3, anion exchanger, structural protein; 2.70A {Homo sapiens} SCOP: d.211.1.1
Probab=99.94 E-value=3.2e-26 Score=175.15 Aligned_cols=132 Identities=20% Similarity=0.271 Sum_probs=94.4
Q ss_pred CCCHHHHHHHHcCCcHHHHHHHHHhcccccccCCCCchhHHHHhhhhhhhhHHHHHHHHHhhccccccccccCCCcHHHH
Q 041785 24 QMDPNLFKAAADGSVEPFKDMAREVIESSLTVHTKNTILHINIICQETENASTKFVEEILEICPALLLQVNAKGDTPLHL 103 (181)
Q Consensus 24 ~~~t~l~~a~~~g~~~~~~~ll~~~~~~~~~~~~g~t~Lh~a~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~g~t~L~~ 103 (181)
.|.||||+|+..|+.+++++|++.+++.+..+..|.||||+| +..++.+++++|++. +.+++.++..|.||||+
T Consensus 244 ~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~g~t~L~~A--~~~~~~~~~~~Ll~~----g~~~~~~~~~g~t~L~~ 317 (437)
T 1n11_A 244 QGVTPLHLAAQEGHAEMVALLLSKQANGNLGNKSGLTPLHLV--AQEGHVPVADVLIKH----GVMVDATTRMGYTPLHV 317 (437)
T ss_dssp TCCCHHHHHHHTTCHHHHHHHHTTTCCTTCCCTTCCCHHHHH--HHHTCHHHHHHHHHH----TCCTTCCCSSCCCHHHH
T ss_pred CCCCHHHHHHHCCCHHHHHHHHhcCCCCCCCCCCCCCHHHHH--HHcCCHHHHHHHHhC----CccCCCCCCCCCCHHHH
Confidence 455666666666666666666666655555566666666666 666666666666665 66666666666666666
Q ss_pred HHHcCCHHHHHHHHHhhhhccCCCCCCcchHHHHHHHhhcccCCCchHHHHHHHcCCHHHHHHHHHcCCCCCCCcC
Q 041785 104 AAKYSHFDIVRVLIERAQLAQHGDEEPESGIEAFRQMIRMVNNEKNTALHEAVSHGNVEVVKILTREDPDYPYSAN 179 (181)
Q Consensus 104 a~~~~~~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~t~l~~A~~~~~~~~~~~Ll~~g~~~~~~~~ 179 (181)
|+..|+.+++++|++.|+++ +.+|..|+||||+|+..|+.+++++|+++|++++..+.
T Consensus 318 A~~~g~~~~v~~Ll~~gad~------------------n~~~~~g~t~L~~A~~~g~~~iv~~Ll~~ga~~~~~~~ 375 (437)
T 1n11_A 318 ASHYGNIKLVKFLLQHQADV------------------NAKTKLGYSPLHQAAQQGHTDIVTLLLKNGASPNEVSS 375 (437)
T ss_dssp HHHSSCSHHHHHHHHTTCCT------------------TCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCSCCCCS
T ss_pred HHHcCcHHHHHHHHhcCCCC------------------CCCCCCCCCHHHHHHHCChHHHHHHHHHCcCCCCCCCC
Confidence 66666666666666666655 88899999999999999999999999999999988764
No 57
>3kea_A K1L; tropism, ANK repeat, viral protein; 2.30A {Vaccinia virus}
Probab=99.94 E-value=3.7e-26 Score=166.08 Aligned_cols=132 Identities=14% Similarity=0.102 Sum_probs=91.6
Q ss_pred HcCCcHHHHHHHHHhcccccccCCCCchhHHHHhhhhhhhhHHHHHHHHHhhccccccccccCCCcHHHHHHHcCCHHHH
Q 041785 34 ADGSVEPFKDMAREVIESSLTVHTKNTILHINIICQETENASTKFVEEILEICPALLLQVNAKGDTPLHLAAKYSHFDIV 113 (181)
Q Consensus 34 ~~g~~~~~~~ll~~~~~~~~~~~~g~t~Lh~a~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~g~t~L~~a~~~~~~~~~ 113 (181)
...+...+..++..+ +.+.+|..|.||||+| +..|+.+++++|++. +++++.. .|+||||+|+..|+.+++
T Consensus 8 ~~~~~~~v~~lL~~~-~~~~~d~~g~t~L~~A--~~~g~~~~v~~Ll~~----g~~~~~~--~g~t~L~~A~~~g~~~~v 78 (285)
T 3kea_A 8 NTWKSKQLKSFLSSK-DTFKADVHGHSASYYA--IADNNVRLVCTLLNA----GALKNLL--ENEFPLHQAATLEDTKIV 78 (285)
T ss_dssp GGCCHHHHHHHHHST-TTTCCCTTSCCHHHHH--HHTTCHHHHHHHHHT----TGGGSCC--TTCCHHHHHTTSSSCHHH
T ss_pred HhcCHHHHHHHHHhC-CCCccCCCCCCHHHHH--HHcCCHHHHHHHHhC----CCCCCCC--CCCCHHHHHHHcCCHHHH
Confidence 445566666666543 4567899999999999 999999999999997 8888887 489999999999999999
Q ss_pred HHHHHhhhhccCCCCCCcchHHHH---------------HHHhhcccCCC-chHHHHHHHcCCHHHHHHHHHcCCCC
Q 041785 114 RVLIERAQLAQHGDEEPESGIEAF---------------RQMIRMVNNEK-NTALHEAVSHGNVEVVKILTREDPDY 174 (181)
Q Consensus 114 ~~L~~~~~~~~~~~~~~~~~~~~~---------------~~~~~~~~~~g-~t~l~~A~~~~~~~~~~~Ll~~g~~~ 174 (181)
++|++.|+++...+..+..+.... +.+++.++..| .||||+|+..|+.+++++|+++|++.
T Consensus 79 ~~Ll~~ga~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~~~~~g~~t~L~~A~~~~~~~~v~~Ll~~g~~~ 155 (285)
T 3kea_A 79 KILLFSGLDDSQFDDKGNTALYYAVDSGNMQTVKLFVKKNWRLMFYGKTGWKTSFYHAVMLNDVSIVSYFLSEIPST 155 (285)
T ss_dssp HHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHHCGGGGGCSSSGGGSHHHHHHHTTCHHHHHHHHTTSCTT
T ss_pred HHHHHCCCCCCCcCCCCCcHHHHHHHcCCHHHHHHHHhcCCCCCccCCCCCCCHHHHHHHcCCHHHHHHHHhCCCcc
Confidence 999999998843333333222111 12344444444 45555555555555555555555443
No 58
>1ycs_B 53BP2, P53BP2; ankyrin repeats, SH3, tumor suppressor, multigene family, nuclear protein, phosphorylation, disease mutation, polymorphism; 2.20A {Homo sapiens} SCOP: b.34.2.1 d.211.1.1 PDB: 4a63_B
Probab=99.94 E-value=6e-27 Score=166.17 Aligned_cols=133 Identities=18% Similarity=0.207 Sum_probs=113.2
Q ss_pred cCCCHHHHHHHHcCCcHHHHHHHHHhcccccccCCCCchhHHHHhhhhhhhhHHHHHHHHHhhccccccccccCCCcHHH
Q 041785 23 SQMDPNLFKAAADGSVEPFKDMAREVIESSLTVHTKNTILHINIICQETENASTKFVEEILEICPALLLQVNAKGDTPLH 102 (181)
Q Consensus 23 ~~~~t~l~~a~~~g~~~~~~~ll~~~~~~~~~~~~g~t~Lh~a~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~g~t~L~ 102 (181)
..+.||||.|+..|+.++++.|++.|++++.++..|.||||+| +..++.+++++|++. +++++.+|..|+||||
T Consensus 35 ~~~~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~d~~g~t~L~~A--~~~g~~~~v~~Ll~~----ga~~~~~d~~g~tpL~ 108 (239)
T 1ycs_B 35 PLPLALLLDSSLEGEFDLVQRIIYEVDDPSLPNDEGITALHNA--VCAGHTEIVKFLVQF----GVNVNAADSDGWTPLH 108 (239)
T ss_dssp --CHHHHHHHHHHTCHHHHHHHTSTTSSCCCCCTTSCCHHHHH--HHHTCHHHHHHHHHH----TCCTTCCCTTCCCHHH
T ss_pred chhhHHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCCHHHHH--HHcCCHHHHHHHHHc----CCCCCccCCCCCCHHH
Confidence 4567889999999999999999988888888888899999999 888899999988887 8888888889999999
Q ss_pred HHHHcCCHHHHHHHHHhhhhccCCCCCCcchHHHHHHHhhcccCCCc-hHHHHH--HHcCCHHHHHHHHHcCCCCCCCcC
Q 041785 103 LAAKYSHFDIVRVLIERAQLAQHGDEEPESGIEAFRQMIRMVNNEKN-TALHEA--VSHGNVEVVKILTREDPDYPYSAN 179 (181)
Q Consensus 103 ~a~~~~~~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~-t~l~~A--~~~~~~~~~~~Ll~~g~~~~~~~~ 179 (181)
+|+..++.+++++|++.|+++ +.++..|. ||+|+| +..|+.+++++|+++|++++..++
T Consensus 109 ~A~~~~~~~~v~~Ll~~ga~~------------------~~~~~~~~~t~l~~a~~~~~g~~~~~~~Ll~~~a~~~~~~~ 170 (239)
T 1ycs_B 109 CAASCNNVQVCKFLVESGAAV------------------FAMTYSDMQTAADKCEEMEEGYTQCSQFLYGVQEKMGIMNK 170 (239)
T ss_dssp HHHHTTCHHHHHHHHHTTCCT------------------TCCCSSSCCCHHHHCCSSSTTCCCHHHHHHHHHHHTTTTGG
T ss_pred HHHHcCCHHHHHHHHHcCCCc------------------ceecCCCCcchHHHHHHhhhccHHHHHHHHHhhhccccccc
Confidence 999999999999999988887 77776666 999988 677888999999998888876654
No 59
>1s70_B 130 kDa myosin-binding subunit of smooth muscle myosin phophatase (M130), serine/threonine protein phosphatase PP1-beta (OR delta) catalytic subunit; myosin phosphatase; HET: PGE; 2.70A {Gallus gallus} SCOP: d.211.1.1
Probab=99.94 E-value=7.4e-26 Score=164.98 Aligned_cols=119 Identities=23% Similarity=0.246 Sum_probs=99.1
Q ss_pred cCCCCchhHHHHhhhhhhhhHHHHHHHHHhhccccccccccCCCcHHHHHHHcCCHHHHHHHHHhhhhccCCCCCCcchH
Q 041785 55 VHTKNTILHINIICQETENASTKFVEEILEICPALLLQVNAKGDTPLHLAAKYSHFDIVRVLIERAQLAQHGDEEPESGI 134 (181)
Q Consensus 55 ~~~g~t~Lh~a~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~g~t~L~~a~~~~~~~~~~~L~~~~~~~~~~~~~~~~~~ 134 (181)
+..|.||||+| +..|+.++++.|++. +.+++..+..|.||||+|+..|+.+++++|++.|+++...+..+..+.
T Consensus 37 ~~~~~t~l~~A--~~~g~~~~v~~Ll~~----g~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~~~~~g~tpL 110 (299)
T 1s70_B 37 KFDDGAVFLAA--CSSGDTEEVLRLLER----GADINYANVDGLTALHQACIDDNVDMVKFLVENGANINQPDNEGWIPL 110 (299)
T ss_dssp EECHHHHHHHH--HHHTCHHHHHHHHHH----CCCTTCBCTTCCBHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHH
T ss_pred ccCCccHHHHH--HHcCCHHHHHHHHHc----CCCCcccCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCcHH
Confidence 56789999999 999999999999997 899999999999999999999999999999999998866555555443
Q ss_pred HHH---------HHH------hh---------------------------------------------------------
Q 041785 135 EAF---------RQM------IR--------------------------------------------------------- 142 (181)
Q Consensus 135 ~~~---------~~~------~~--------------------------------------------------------- 142 (181)
... ..+ ++
T Consensus 111 ~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~l~~A~~~~~~~~~~~ll~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~ 190 (299)
T 1s70_B 111 HAAASCGYLDIAEYLISQGAHVGAVNSEGDTPLDIAEEEAMEELLQNEVNRQGVDIEAARKEEERIMLRDARQWLNSGHI 190 (299)
T ss_dssp HHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHCCSHHHHHHHHHHHHHHTCCHHHHHHHHHHHHHHHHHHHHHHTCC
T ss_pred HHHHHcCCHHHHHHHHhCCCCCCCcCCCCCCHHHHHHhcchHHHHHHHHhhcCCCchhhhhhhhhHHHHHHHHHHhccCc
Confidence 322 000 00
Q ss_pred ---cccCCCchHHHHHHHcCCHHHHHHHHHcCCCCCCCcC
Q 041785 143 ---MVNNEKNTALHEAVSHGNVEVVKILTREDPDYPYSAN 179 (181)
Q Consensus 143 ---~~~~~g~t~l~~A~~~~~~~~~~~Ll~~g~~~~~~~~ 179 (181)
..+..|.||||+|+..|+.+++++|+++|++++..+.
T Consensus 191 ~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~d~~~~d~ 230 (299)
T 1s70_B 191 NDVRHAKSGGTALHVAAAKGYTEVLKLLIQARYDVNIKDY 230 (299)
T ss_dssp CCCCCTTTCCCHHHHHHHHTCHHHHHHHHTTTCCTTCCCT
T ss_pred chhhhcCCCCCHHHHHHHCCcHHHHHHHHHcCCCCCCcCC
Confidence 1345789999999999999999999999999988764
No 60
>1ycs_B 53BP2, P53BP2; ankyrin repeats, SH3, tumor suppressor, multigene family, nuclear protein, phosphorylation, disease mutation, polymorphism; 2.20A {Homo sapiens} SCOP: b.34.2.1 d.211.1.1 PDB: 4a63_B
Probab=99.94 E-value=2.6e-27 Score=168.02 Aligned_cols=131 Identities=18% Similarity=0.057 Sum_probs=93.8
Q ss_pred CCCHHHHHHHHcCCcHHHHHHHHHhcccccccCCCCchhHHHHhhhhhhhhHHHHHHHHHhhccccccccccCCCcHHHH
Q 041785 24 QMDPNLFKAAADGSVEPFKDMAREVIESSLTVHTKNTILHINIICQETENASTKFVEEILEICPALLLQVNAKGDTPLHL 103 (181)
Q Consensus 24 ~~~t~l~~a~~~g~~~~~~~ll~~~~~~~~~~~~g~t~Lh~a~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~g~t~L~~ 103 (181)
.|.||||.|+..|+.+.++.|++.|.+.+. +..|.||||+| +..|+.++++.|++. +.+++.++..|.||||+
T Consensus 4 ~g~t~L~~a~~~~~~~~~~~ll~~g~~~~~-~~~~~t~L~~A--~~~g~~~~v~~Ll~~----g~~~~~~d~~g~t~L~~ 76 (239)
T 1ycs_B 4 TGQVSLPPGKRTNLRKTGSERIAHGMRVKF-NPLPLALLLDS--SLEGEFDLVQRIIYE----VDDPSLPNDEGITALHN 76 (239)
T ss_dssp ----------------------------------CHHHHHHH--HHHTCHHHHHHHTST----TSSCCCCCTTSCCHHHH
T ss_pred cccccCchhhhhhhHHHHHHHhccCCCccc-CchhhHHHHHH--HHcCCHHHHHHHHHc----CCCCCCcCCCCCCHHHH
Confidence 589999999999999999999999988875 46789999999 999999999999986 88999999999999999
Q ss_pred HHHcCCHHHHHHHHHhhhhccCCCCCCcchHHHHHHHhhcccCCCchHHHHHHHcCCHHHHHHHHHcCCCCCCCcC
Q 041785 104 AAKYSHFDIVRVLIERAQLAQHGDEEPESGIEAFRQMIRMVNNEKNTALHEAVSHGNVEVVKILTREDPDYPYSAN 179 (181)
Q Consensus 104 a~~~~~~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~t~l~~A~~~~~~~~~~~Ll~~g~~~~~~~~ 179 (181)
|+..|+.+++++|++.|+++ +.+|..|+||||+|+..|+.+++++|+++|++++..++
T Consensus 77 A~~~g~~~~v~~Ll~~ga~~------------------~~~d~~g~tpL~~A~~~~~~~~v~~Ll~~ga~~~~~~~ 134 (239)
T 1ycs_B 77 AVCAGHTEIVKFLVQFGVNV------------------NAADSDGWTPLHCAASCNNVQVCKFLVESGAAVFAMTY 134 (239)
T ss_dssp HHHHTCHHHHHHHHHHTCCT------------------TCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCS
T ss_pred HHHcCCHHHHHHHHHcCCCC------------------CccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCcceecC
Confidence 99999999999999999988 89999999999999999999999999999999987764
No 61
>2etb_A Transient receptor potential cation channel subfamily V member 2; TRPV2, ankyrin repeat domain, transport protein; 1.65A {Rattus norvegicus} PDB: 2eta_A 2etc_A 2f37_A
Probab=99.94 E-value=9.8e-27 Score=166.36 Aligned_cols=130 Identities=22% Similarity=0.211 Sum_probs=119.2
Q ss_pred cccCCCHHHHHHHHc---CCcHHHHHHHHHhccccc-----------ccCCCCchhHHHHhhhhhhhhHHHHHHHHHhhc
Q 041785 21 KQSQMDPNLFKAAAD---GSVEPFKDMAREVIESSL-----------TVHTKNTILHINIICQETENASTKFVEEILEIC 86 (181)
Q Consensus 21 ~~~~~~t~l~~a~~~---g~~~~~~~ll~~~~~~~~-----------~~~~g~t~Lh~a~~~~~~~~~~~~~l~~~~~~~ 86 (181)
....|.||||+|+.. |+.+++++|++.|++.+. .+..|.||||+| +..++.+++++|++.
T Consensus 39 ~d~~g~t~L~~A~~~~~~g~~~~v~~Ll~~g~~~~~~~~~~~~~~~~~d~~g~t~L~~A--~~~g~~~~v~~Ll~~---- 112 (256)
T 2etb_A 39 EGSTGKTCLMKAVLNLQDGVNACIMPLLQIDKDSGNPKPLVNAQCTDEFYQGHSALHIA--IEKRSLQCVKLLVEN---- 112 (256)
T ss_dssp BTTTTBCHHHHHHHTCBTTBCTTHHHHHHHHHHTTCSSCGGGCCCCSTTTTTCCHHHHH--HHTTCHHHHHHHHHT----
T ss_pred CCCCCCCHHHHHHHccccchHHHHHHHHhcCCcccchhhhcccccccccccCCCHHHHH--HHcCCHHHHHHHHHc----
Confidence 456799999999999 999999999998877652 236799999999 999999999999997
Q ss_pred cccccccccC-------------CCcHHHHHHHcCCHHHHHHHHH---hhhhccCCCCCCcchHHHHHHHhhcccCCCch
Q 041785 87 PALLLQVNAK-------------GDTPLHLAAKYSHFDIVRVLIE---RAQLAQHGDEEPESGIEAFRQMIRMVNNEKNT 150 (181)
Q Consensus 87 ~~~~~~~~~~-------------g~t~L~~a~~~~~~~~~~~L~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~t 150 (181)
|++++.++.. |.||||+|+..|+.+++++|++ .|+++ +.+|..|+|
T Consensus 113 ga~~~~~~~~~~~~~~~~~~~~~g~tpL~~A~~~~~~~~v~~Ll~~~~~ga~~------------------n~~d~~g~T 174 (256)
T 2etb_A 113 GADVHLRACGRFFQKHQGTCFYFGELPLSLAACTKQWDVVTYLLENPHQPASL------------------EATDSLGNT 174 (256)
T ss_dssp TCCTTCCCCSGGGSCCSSSCCCSCSSHHHHHHHTTCHHHHHHHHHCSSCCCCT------------------TCCCTTSCC
T ss_pred CCCCCcccccccccccccccccCCCCHHHHHHHcCCHHHHHHHHhccccCCCc------------------CccCCCCCC
Confidence 8999998876 9999999999999999999999 88888 899999999
Q ss_pred HHHHHHH--cCCHH-------HHHHHHHcCCCC
Q 041785 151 ALHEAVS--HGNVE-------VVKILTREDPDY 174 (181)
Q Consensus 151 ~l~~A~~--~~~~~-------~~~~Ll~~g~~~ 174 (181)
|||+|+. .++.+ ++++|+++|+++
T Consensus 175 pLh~A~~~~~~~~~~~~~~~~iv~~Ll~~ga~~ 207 (256)
T 2etb_A 175 VLHALVMIADNSPENSALVIHMYDGLLQMGARL 207 (256)
T ss_dssp HHHHHHHHCCSCHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHcccCCchhhHHHHHHHHHHHHcCCCc
Confidence 9999999 78888 999999999998
No 62
>3ehr_A Osteoclast-stimulating factor 1; beta barrel, helix-turn-helix, SH3, ankyrin repeat, signaling protein, ANK repeat, cytoplasm, phosphoprotein; 1.95A {Homo sapiens} PDB: 3ehq_A
Probab=99.94 E-value=1.4e-27 Score=167.47 Aligned_cols=135 Identities=22% Similarity=0.202 Sum_probs=114.6
Q ss_pred ccCCCHHHHHHHHcCCcHHHHHHHHHhcccccccCCCCchhHHHHhhhhhhhhHHHHHHHHHhhccccccccccCCCcHH
Q 041785 22 QSQMDPNLFKAAADGSVEPFKDMAREVIESSLTVHTKNTILHINIICQETENASTKFVEEILEICPALLLQVNAKGDTPL 101 (181)
Q Consensus 22 ~~~~~t~l~~a~~~g~~~~~~~ll~~~~~~~~~~~~g~t~Lh~a~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~g~t~L 101 (181)
...|.||||+|+..|+.++++.|++.|++++.++..|.||||+| +..++.+++++|+.. .+++++.++..|+|||
T Consensus 70 ~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A--~~~~~~~~v~~Ll~~---~g~~~~~~d~~g~tpL 144 (222)
T 3ehr_A 70 AESIDNPLHEAAKRGNLSWLRECLDNRVGVNGLDKAGSTALYWA--CHGGHKDIVEMLFTQ---PNIELNQQNKLGDTAL 144 (222)
T ss_dssp EEEESCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHH--HHTTCHHHHHHHTTS---TTCCCCCCCTTSCCHH
T ss_pred ccccccccccccccCcHHHHHHHHhCCCCccccCCCCCCHHHHH--HHcCCHHHHHHHHcC---CCCCccccCCCCCCHH
Confidence 44678999999999999999999999999988899999999999 999999999999874 4889999999999999
Q ss_pred HHHHHcCCHHHHHHHHHhhhhccCCCCCCcchHHHHHHHhhcccCCCchHHHHHHHcCCHHHHHHHHHcCCCCCCCcC
Q 041785 102 HLAAKYSHFDIVRVLIERAQLAQHGDEEPESGIEAFRQMIRMVNNEKNTALHEAVSHGNVEVVKILTREDPDYPYSAN 179 (181)
Q Consensus 102 ~~a~~~~~~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~t~l~~A~~~~~~~~~~~Ll~~g~~~~~~~~ 179 (181)
|+|+..|+.+++++|++.|+++ +.+|..|.|||++|+..++.++++.|++.|+.....+.
T Consensus 145 ~~A~~~~~~~~v~~Ll~~ga~~------------------~~~~~~g~t~l~~A~~~~~~~~l~~l~~~~~~~~~~~~ 204 (222)
T 3ehr_A 145 HAAAWKGYADIVQLLLAKGART------------------DLRNIEKKLAFDMATNAACASLLKKKQGTDAVRTLSNA 204 (222)
T ss_dssp HHHHHHTCHHHHHHHHHHTCCS------------------CCCCTTSCCHHHHCCSHHHHHHHC--------------
T ss_pred HHHHHcCCHHHHHHHHHcCCCC------------------ccccCCCCCHHHHhcchhHHHHHHHHhccchhhhccch
Confidence 9999999999999999999998 88999999999999999999999999999999877653
No 63
>2xai_A ASB-9, ankyrin repeat and SOCS box protein 9; transcription regulation, autoantibody; 2.58A {Homo sapiens}
Probab=99.94 E-value=6.4e-26 Score=162.75 Aligned_cols=152 Identities=14% Similarity=0.120 Sum_probs=120.7
Q ss_pred cccCCCHHHHHHHHcCCcHHHHHHHHHhcccccccCCCCchhHHHHhhhhhhhhHHHHHHHHHhhccccccccccCCCcH
Q 041785 21 KQSQMDPNLFKAAADGSVEPFKDMAREVIESSLTVHTKNTILHINIICQETENASTKFVEEILEICPALLLQVNAKGDTP 100 (181)
Q Consensus 21 ~~~~~~t~l~~a~~~g~~~~~~~ll~~~~~~~~~~~~g~t~Lh~a~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~g~t~ 100 (181)
....|.||||+|+..|+.++++.|++.|++++..+..|.||||+| +..++.+++++|++. +++++. +..|.||
T Consensus 32 ~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A--~~~~~~~~v~~Ll~~----g~~~~~-~~~g~t~ 104 (261)
T 2xai_A 32 ITADHVSPLHEACLGGHLSCVKILLKHGAQVNGVTADWHTPLFNA--CVSGSWDCVNLLLQH----GASVQP-ESDLASP 104 (261)
T ss_dssp CCTTCCCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHH--HHHTCHHHHHHHHHT----TCCSSC-SCTTCCH
T ss_pred cCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCCHHHHH--HHcCCHHHHHHHHHC----CCCCCC-CCCCCCH
Confidence 345688999999999999999999998888888888899999999 888889988888886 666664 3457888
Q ss_pred HHHHHHcCCHHHHHHHHHhhhhccCCCCCCcchHHHH---------------HHHhhcccCCCchHHHHHHHcCCHHHHH
Q 041785 101 LHLAAKYSHFDIVRVLIERAQLAQHGDEEPESGIEAF---------------RQMIRMVNNEKNTALHEAVSHGNVEVVK 165 (181)
Q Consensus 101 L~~a~~~~~~~~~~~L~~~~~~~~~~~~~~~~~~~~~---------------~~~~~~~~~~g~t~l~~A~~~~~~~~~~ 165 (181)
||+|+..|+.+++++|++.|+++...+..+....... +.+++ .+..|+||||+|+..++.++++
T Consensus 105 L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~-~~~~g~t~Lh~A~~~~~~~~v~ 183 (261)
T 2xai_A 105 IHEAARRGHVECVNSLIAYGGNIDHKISHLGTPLYLACENQQRACVKKLLESGADVN-QGKGQDSPLHAVARTASEELAC 183 (261)
T ss_dssp HHHHHHTTCHHHHHHHHHTTCCTTCCBTTTBCHHHHHHHTTCHHHHHHHHHHTCCTT-CCBTTBCHHHHHHHHTCHHHHH
T ss_pred HHHHHHcCcHHHHHHHHHcCCCCCcCCCCCCCHHHHHHHhCCHHHHHHHHHcCCCCC-CCCCCCChHHHHHHcCCHHHHH
Confidence 8888888888888888888877755554444433222 12234 3788999999999999999999
Q ss_pred HHHHcCCCCCCCcCC
Q 041785 166 ILTREDPDYPYSANN 180 (181)
Q Consensus 166 ~Ll~~g~~~~~~~~~ 180 (181)
+|+++|++++.+++.
T Consensus 184 ~Ll~~gad~~~~d~~ 198 (261)
T 2xai_A 184 LLMDFGADTQAKNAE 198 (261)
T ss_dssp HHHHTTCCTTCCCTT
T ss_pred HHHHcCCCCCCcCCC
Confidence 999999999987653
No 64
>3ljn_A Hypothetical protein; ankyrin, structural genomics, PSI, structural genomics of pathogenic protozoa consortium, SGPP, ANK repeat; 2.90A {Leishmania major}
Probab=99.94 E-value=2.2e-26 Score=172.31 Aligned_cols=38 Identities=21% Similarity=0.157 Sum_probs=24.4
Q ss_pred hcccCCCchHHHHHHHcCCHHHHHHHHHcCCCCCCCcC
Q 041785 142 RMVNNEKNTALHEAVSHGNVEVVKILTREDPDYPYSAN 179 (181)
Q Consensus 142 ~~~~~~g~t~l~~A~~~~~~~~~~~Ll~~g~~~~~~~~ 179 (181)
+.+|..|+||||+|+..|+.+++++|+++|++++..++
T Consensus 205 ~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~gad~~~~d~ 242 (364)
T 3ljn_A 205 DYANKQGNSHLHWAILINWEDVAMRFVEMGIDVNMEDN 242 (364)
T ss_dssp TCCCTTCCCTTHHHHTTTCHHHHHHHHTTTCCTTCCCT
T ss_pred cccCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCCCCCC
Confidence 55566666666666666666666666666666665543
No 65
>3ljn_A Hypothetical protein; ankyrin, structural genomics, PSI, structural genomics of pathogenic protozoa consortium, SGPP, ANK repeat; 2.90A {Leishmania major}
Probab=99.94 E-value=3.2e-26 Score=171.42 Aligned_cols=130 Identities=18% Similarity=0.136 Sum_probs=123.6
Q ss_pred cccCCCHHHHHHHHcC--CcHHHHHHHHHhcccccccCCCCchhHHHHhhhhhhhhHHHHHHHHHhhcccc-----cccc
Q 041785 21 KQSQMDPNLFKAAADG--SVEPFKDMAREVIESSLTVHTKNTILHINIICQETENASTKFVEEILEICPAL-----LLQV 93 (181)
Q Consensus 21 ~~~~~~t~l~~a~~~g--~~~~~~~ll~~~~~~~~~~~~g~t~Lh~a~~~~~~~~~~~~~l~~~~~~~~~~-----~~~~ 93 (181)
....|.||||+|+..| +.+++++|++.|++++..+..|.||||+| +..++.+++++|++. +++ ++.+
T Consensus 134 ~~~~g~t~L~~A~~~g~~~~~~v~~Ll~~ga~~~~~d~~g~t~L~~A--~~~g~~~~v~~Ll~~----g~~~~~~~~~~~ 207 (364)
T 3ljn_A 134 KHCKGQTALHWCVGLGPEYLEMIKILVQLGASPTAKDKADETPLMRA--MEFRNREALDLMMDT----VPSKSSLRLDYA 207 (364)
T ss_dssp EEESCCCHHHHHHHSCGGGHHHHHHHHHHTCCTTCCCTTSCCHHHHH--HHTTCHHHHHHHHHH----CSCSSSCCTTCC
T ss_pred CCCCCCCHHHHHHHcCCchHHHHHHHHHcCCCCcccCCCCCCHHHHH--HHcCCHHHHHHHHhc----cccccccccccc
Confidence 4567899999999999 99999999999999999999999999999 999999999999998 777 9999
Q ss_pred ccCCCcHHHHHHHcCCHHHHHHHHHhhhhccCCCCCCcchHHHHHHHhhcccCCCchHHHHHHHcCCHHHHHHHHHcCCC
Q 041785 94 NAKGDTPLHLAAKYSHFDIVRVLIERAQLAQHGDEEPESGIEAFRQMIRMVNNEKNTALHEAVSHGNVEVVKILTREDPD 173 (181)
Q Consensus 94 ~~~g~t~L~~a~~~~~~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~t~l~~A~~~~~~~~~~~Ll~~g~~ 173 (181)
+..|+||||+|+..|+.+++++|++.|+++ +.+|..|+||||+|+..|+.+++++|+++|++
T Consensus 208 ~~~g~t~L~~A~~~g~~~~v~~Ll~~gad~------------------~~~d~~g~tpL~~A~~~g~~~~v~~Ll~~~~~ 269 (364)
T 3ljn_A 208 NKQGNSHLHWAILINWEDVAMRFVEMGIDV------------------NMEDNEHTVPLYLSVRAAMVLLTKELLQKTDV 269 (364)
T ss_dssp CTTCCCTTHHHHTTTCHHHHHHHHTTTCCT------------------TCCCTTSCCHHHHHHHTCCHHHHHHHHHHSCH
T ss_pred CCCCCcHHHHHHHcCCHHHHHHHHHcCCCC------------------CCCCCCCCCHHHHHHHhChHHHHHHHHHcCCc
Confidence 999999999999999999999999999998 89999999999999999999999999999877
Q ss_pred C
Q 041785 174 Y 174 (181)
Q Consensus 174 ~ 174 (181)
+
T Consensus 270 ~ 270 (364)
T 3ljn_A 270 F 270 (364)
T ss_dssp H
T ss_pred h
Confidence 5
No 66
>1wdy_A 2-5A-dependent ribonuclease; hydrolase, RNA-binding; HET: 25A; 1.80A {Homo sapiens} SCOP: d.211.1.1
Probab=99.94 E-value=1e-25 Score=162.66 Aligned_cols=133 Identities=21% Similarity=0.208 Sum_probs=123.5
Q ss_pred ccCCCHHHHHHHHcCCcHHHHHHHHH-hcccccccCCCCchhHHHHhhhhhh----hhHHHHHHHHHhhccccccccccC
Q 041785 22 QSQMDPNLFKAAADGSVEPFKDMARE-VIESSLTVHTKNTILHINIICQETE----NASTKFVEEILEICPALLLQVNAK 96 (181)
Q Consensus 22 ~~~~~t~l~~a~~~g~~~~~~~ll~~-~~~~~~~~~~g~t~Lh~a~~~~~~~----~~~~~~l~~~~~~~~~~~~~~~~~ 96 (181)
...|.||||.|+..|+.+++++|++. +.+++..+..|.||||+| +..++ .+++++|++. +.+++.++..
T Consensus 145 ~~~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~g~t~l~~a--~~~~~~~~~~~i~~~Ll~~----g~~~~~~~~~ 218 (285)
T 1wdy_A 145 RKGGATALMDAAEKGHVEVLKILLDEMGADVNACDNMGRNALIHA--LLSSDDSDVEAITHLLLDH----GADVNVRGER 218 (285)
T ss_dssp TCCCCCHHHHHHHHTCHHHHHHHHHTSCCCTTCCCTTSCCHHHHH--HHCSCTTTHHHHHHHHHHT----TCCSSCCCTT
T ss_pred ccCCCcHHHHHHHcCCHHHHHHHHHhcCCCCCccCCCCCCHHHHH--HHccccchHHHHHHHHHHc----CCCCCCcCCC
Confidence 45688999999999999999999997 888888899999999999 88888 7777777776 9999999999
Q ss_pred CCcHHHHHHHcCCHHHHHHHHH-hhhhccCCCCCCcchHHHHHHHhhcccCCCchHHHHHHHcCCHHHHHHHHHcCCCCC
Q 041785 97 GDTPLHLAAKYSHFDIVRVLIE-RAQLAQHGDEEPESGIEAFRQMIRMVNNEKNTALHEAVSHGNVEVVKILTREDPDYP 175 (181)
Q Consensus 97 g~t~L~~a~~~~~~~~~~~L~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~t~l~~A~~~~~~~~~~~Ll~~g~~~~ 175 (181)
|.||||+|+..++.+++++|++ .|.++ +.+|..|+||||+|+..|+.+++++|+++|++++
T Consensus 219 g~t~L~~A~~~~~~~~v~~Ll~~~g~~~------------------~~~~~~g~t~l~~A~~~~~~~i~~~Ll~~Ga~~~ 280 (285)
T 1wdy_A 219 GKTPLILAVEKKHLGLVQRLLEQEHIEI------------------NDTDSDGKTALLLAVELKLKKIAELLCKRGASTD 280 (285)
T ss_dssp SCCHHHHHHHTTCHHHHHHHHHSSSCCT------------------TCCCTTSCCHHHHHHHTTCHHHHHHHHHHSSCSC
T ss_pred CCcHHHHHHHcCCHHHHHHHHhccCCCc------------------cccCCCCCcHHHHHHHcCcHHHHHHHHHcCCCCC
Confidence 9999999999999999999999 78777 8899999999999999999999999999999999
Q ss_pred CCc
Q 041785 176 YSA 178 (181)
Q Consensus 176 ~~~ 178 (181)
.++
T Consensus 281 ~~d 283 (285)
T 1wdy_A 281 CGD 283 (285)
T ss_dssp CSS
T ss_pred ccc
Confidence 876
No 67
>1ikn_D Protein (I-kappa-B-alpha), protein (NF-kappa-B P50D subunit); transcription factor, IKB/NFKB complex; 2.30A {Homo sapiens} SCOP: d.211.1.1 PDB: 1nfi_E
Probab=99.93 E-value=3.6e-26 Score=161.58 Aligned_cols=130 Identities=15% Similarity=0.134 Sum_probs=120.7
Q ss_pred ccCCCHHHHHHHHcCCcHHHHHHHHHhcc------cccccCCCCchhHHHHhhhhhhhhHHHHHHHHHhhcccccccccc
Q 041785 22 QSQMDPNLFKAAADGSVEPFKDMAREVIE------SSLTVHTKNTILHINIICQETENASTKFVEEILEICPALLLQVNA 95 (181)
Q Consensus 22 ~~~~~t~l~~a~~~g~~~~~~~ll~~~~~------~~~~~~~g~t~Lh~a~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~ 95 (181)
...|.||||+|+..|+.++++.|++.+.+ ....+..|.||||+| +..++.+++++|++. +++++.++.
T Consensus 75 ~~~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~~~~g~t~L~~A--~~~~~~~~v~~Ll~~----g~~~~~~~~ 148 (236)
T 1ikn_D 75 DFRGNTPLHLACEQGCLASVGVLTQSCTTPHLHSILKATNYNGHTCLHLA--SIHGYLGIVELLVSL----GADVNAQEP 148 (236)
T ss_dssp CTTCCCHHHHHHHHTCHHHHHHHHHSTTTTSSSCGGGCCCTTCCCHHHHH--HHTTCHHHHHHHHHH----TCCTTCCCT
T ss_pred CCCCCCHHHHHHHcCCHHHHHHHHhcccchhHHHHhhccCCCCCCHHHHH--HHcCCHHHHHHHHHc----CCCCCCCCC
Confidence 45789999999999999999999998764 345788899999999 999999999999998 999999997
Q ss_pred -CCCcHHHHHHHcCCHHHHHHHHHhhhhccCCCCCCcchHHHHHHHhhcccCCCchHHHHHHHcCCHHHHHHHHHcCCCC
Q 041785 96 -KGDTPLHLAAKYSHFDIVRVLIERAQLAQHGDEEPESGIEAFRQMIRMVNNEKNTALHEAVSHGNVEVVKILTREDPDY 174 (181)
Q Consensus 96 -~g~t~L~~a~~~~~~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~t~l~~A~~~~~~~~~~~Ll~~g~~~ 174 (181)
.|.||||+|+..++.+++++|++.|+++ +.+|..|.|||++|+..++.+++++|+++|++.
T Consensus 149 ~~g~tpL~~A~~~~~~~~v~~Ll~~ga~~------------------~~~~~~g~tpl~~A~~~~~~~~~~~Ll~~ga~~ 210 (236)
T 1ikn_D 149 CNGRTALHLAVDLQNPDLVSLLLKCGADV------------------NRVTYQGYSPYQLTWGRPSTRIQQQLGQLTLEN 210 (236)
T ss_dssp TTCCCHHHHHHHTTCHHHHHHHHTTTCCS------------------CCCCTTCCCGGGGCTTSSCHHHHHHHHTTSCGG
T ss_pred CCCCCHHHHHHHcCCHHHHHHHHHcCCCC------------------CcccCCCCCHHHHHHccCchHHHHHHHHcchhh
Confidence 9999999999999999999999999998 889999999999999999999999999999975
Q ss_pred C
Q 041785 175 P 175 (181)
Q Consensus 175 ~ 175 (181)
.
T Consensus 211 ~ 211 (236)
T 1ikn_D 211 L 211 (236)
T ss_dssp G
T ss_pred h
Confidence 4
No 68
>3d9h_A CDNA FLJ77766, highly similar to HOMO sapiens ankyrin repeat and SOCS box-containing...; ASB9, ANK repeat, L-shaped, structural protein; 2.20A {Homo sapiens}
Probab=99.93 E-value=1.6e-25 Score=162.74 Aligned_cols=152 Identities=15% Similarity=0.129 Sum_probs=120.5
Q ss_pred cccCCCHHHHHHHHcCCcHHHHHHHHHhcccccccCCCCchhHHHHhhhhhhhhHHHHHHHHHhhccccccccccCCCcH
Q 041785 21 KQSQMDPNLFKAAADGSVEPFKDMAREVIESSLTVHTKNTILHINIICQETENASTKFVEEILEICPALLLQVNAKGDTP 100 (181)
Q Consensus 21 ~~~~~~t~l~~a~~~g~~~~~~~ll~~~~~~~~~~~~g~t~Lh~a~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~g~t~ 100 (181)
....|.||||+|+..|+.+++++|++.|++++..+..|.||||+| +..++.+++++|++. +.+++..+ .|.||
T Consensus 88 ~~~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~~~~~g~t~L~~A--~~~~~~~~v~~Ll~~----g~~~~~~~-~g~t~ 160 (285)
T 3d9h_A 88 ITADHVSPLHEACLGGHLSCVKILLKHGAQVNGVTADWHTPLFNA--CVSGSWDCVNLLLQH----GASVQPES-DLASP 160 (285)
T ss_dssp ECTTCCCHHHHHHHTTCHHHHHHHHHTTCCSSCCCTTCCCHHHHH--HHHTCHHHHHHHHHT----TCCSSCSC-TTSCH
T ss_pred cCCCCCCHHHHHHHCCcHHHHHHHHHCCCCCCCCCCCCCCHHHHH--HHcCHHHHHHHHHHC----CCCCCCCC-CCCCH
Confidence 345688999999999999999999998888888888899999999 888899999888886 66666543 47888
Q ss_pred HHHHHHcCCHHHHHHHHHhhhhccCCCCCCcchHHHH---------H------HHhhcccCCCchHHHHHHHcCCHHHHH
Q 041785 101 LHLAAKYSHFDIVRVLIERAQLAQHGDEEPESGIEAF---------R------QMIRMVNNEKNTALHEAVSHGNVEVVK 165 (181)
Q Consensus 101 L~~a~~~~~~~~~~~L~~~~~~~~~~~~~~~~~~~~~---------~------~~~~~~~~~g~t~l~~A~~~~~~~~~~ 165 (181)
||+|+..|+.+++++|++.|+++...+..+....... + .+++ .+..|+||||+|+..++.++++
T Consensus 161 L~~A~~~g~~~~v~~Ll~~g~~~~~~d~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~-~~~~g~t~L~~A~~~~~~~~v~ 239 (285)
T 3d9h_A 161 IHEAARRGHVECVNSLIAYGGNIDHKISHLGTPLYLACENQQRACVKKLLESGADVN-QGKGQDSPLHAVVRTASEELAC 239 (285)
T ss_dssp HHHHHHHTCHHHHHHHHHTTCCTTCCBTTTBCHHHHHHHTTCHHHHHHHHHTTCCTT-CCBTTBCHHHHHHHTTCHHHHH
T ss_pred HHHHHHcCCHHHHHHHHHCCCCCCCcCCCCCCHHHHHHHcCcHHHHHHHHHCCCCCC-CCCCCCCHHHHHHHcCCHHHHH
Confidence 8888888888888888888777655554444433222 1 1234 3788999999999999999999
Q ss_pred HHHHcCCCCCCCcCC
Q 041785 166 ILTREDPDYPYSANN 180 (181)
Q Consensus 166 ~Ll~~g~~~~~~~~~ 180 (181)
+|+++|++++.+++.
T Consensus 240 ~Ll~~gad~~~~d~~ 254 (285)
T 3d9h_A 240 LLMDFGADTQAKNAE 254 (285)
T ss_dssp HHHHTTCCTTCCCTT
T ss_pred HHHHCCCCCCCcCCC
Confidence 999999999987753
No 69
>1bd8_A P19INK4D CDK4/6 inhibitor; tumor suppressor, ankyrin motif; 1.80A {Homo sapiens} SCOP: d.211.1.1 PDB: 1bi8_B 1ap7_A 1blx_B
Probab=99.93 E-value=1.3e-25 Score=149.17 Aligned_cols=129 Identities=22% Similarity=0.250 Sum_probs=118.1
Q ss_pred CCHHHHHHHHcCCcHHHHHHHHH-hcccccccCCCCchhHHHHhhhhhhhhHHHHHHHHHhhccccccccccCCCcHHHH
Q 041785 25 MDPNLFKAAADGSVEPFKDMARE-VIESSLTVHTKNTILHINIICQETENASTKFVEEILEICPALLLQVNAKGDTPLHL 103 (181)
Q Consensus 25 ~~t~l~~a~~~g~~~~~~~ll~~-~~~~~~~~~~g~t~Lh~a~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~g~t~L~~ 103 (181)
+.|+||.|+..|+.+.+++|++. +.+++..+..|.||||+| ..++.+++++|++. |.+++.++..|.||||+
T Consensus 2 ~~~~L~~A~~~g~~~~v~~ll~~~~~~~~~~~~~g~t~L~~~---~~~~~~~v~~Ll~~----g~~~~~~~~~g~t~L~~ 74 (156)
T 1bd8_A 2 AGDRLSGAAARGDVQEVRRLLHRELVHPDALNRFGKTALQVM---MFGSTAIALELLKQ----GASPNVQDTSGTSPVHD 74 (156)
T ss_dssp HHHHHHHHHHHTCHHHHHHHHHTTCCCTTCCCTTSCCHHHHS---CTTCHHHHHHHHHT----TCCTTCCCTTSCCHHHH
T ss_pred cchHHHHHHHhCCHHHHHHHHHhhCcCccccCCCCCcHHHHH---HcCCHHHHHHHHHC----CCCCCCcCCCCCCHHHH
Confidence 35899999999999999999997 336677899999999994 56899999999987 99999999999999999
Q ss_pred HHHcCCHHHHHHHHHhhhhccCCCCCCcchHHHHHHHhhcccCCCchHHHHHHHcCCHHHHHHHHHcCCCCCCCcC
Q 041785 104 AAKYSHFDIVRVLIERAQLAQHGDEEPESGIEAFRQMIRMVNNEKNTALHEAVSHGNVEVVKILTREDPDYPYSAN 179 (181)
Q Consensus 104 a~~~~~~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~t~l~~A~~~~~~~~~~~Ll~~g~~~~~~~~ 179 (181)
|+..|+.+++++|++.|+++ +.+|..|+||||+|+..|+.+++++|+++ ++++..+.
T Consensus 75 A~~~~~~~~v~~Ll~~g~~~------------------~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~-~~~~~~~~ 131 (156)
T 1bd8_A 75 AARTGFLDTLKVLVEHGADV------------------NVPDGTGALPIHLAVQEGHTAVVSFLAAE-SDLHRRDA 131 (156)
T ss_dssp HHHTTCHHHHHHHHHTTCCS------------------CCCCTTSCCHHHHHHHHTCHHHHHHHHTT-SCTTCCCT
T ss_pred HHHcCcHHHHHHHHHcCCCC------------------CCcCCCCCcHHHHHHHhChHHHHHHHHhc-cCCCCcCC
Confidence 99999999999999999887 88899999999999999999999999999 88887764
No 70
>3t8k_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center F or structural genomics, MCSG; 1.77A {Leptotrichia buccalis}
Probab=99.93 E-value=4.2e-27 Score=161.04 Aligned_cols=133 Identities=10% Similarity=-0.009 Sum_probs=115.3
Q ss_pred cCCCHHHHHHHHcCCc----HHHHHHHHHhcccccccCCCCchhHHHHhhhhhh------hhHHHHHHHHHhhccccccc
Q 041785 23 SQMDPNLFKAAADGSV----EPFKDMAREVIESSLTVHTKNTILHINIICQETE------NASTKFVEEILEICPALLLQ 92 (181)
Q Consensus 23 ~~~~t~l~~a~~~g~~----~~~~~ll~~~~~~~~~~~~g~t~Lh~a~~~~~~~------~~~~~~l~~~~~~~~~~~~~ 92 (181)
..|.||||+|+..|+. +++++|++.|++++.++..|.||||+| +..++ .+++++|++. |++++.
T Consensus 36 ~~g~T~Lh~A~~~~~~~~~~~iv~~Ll~~Gadvn~~d~~g~TpLh~a--~~~~~~~~~~~~~iv~~Ll~~----Gadin~ 109 (186)
T 3t8k_A 36 VLKSNILYDVLRNNNDEARYKISMFLINKGADIKSRTKEGTTLFFPL--FQGGGNDITGTTELCKIFLEK----GADITA 109 (186)
T ss_dssp HHTTTHHHHHTTCSCHHHHHHHHHHHHHTTCCSSCCCTTCCCTHHHH--HHHCTTCHHHHHHHHHHHHHT----TCCSSS
T ss_pred cCCCCHHHHHHHcCCcchHHHHHHHHHHCCCCCCCCCCCCCcHHHHH--HHcCCcchhhHHHHHHHHHHC----CCCCCc
Confidence 4689999999999975 489999999999999999999999999 77765 4677888876 999999
Q ss_pred cccCCC-cHHHHHHHcC-----CHHHHHHHHH-hhhhccCCCCCCcchHHHHHHHhhcccCCCchHHHHHHHcCCHHHHH
Q 041785 93 VNAKGD-TPLHLAAKYS-----HFDIVRVLIE-RAQLAQHGDEEPESGIEAFRQMIRMVNNEKNTALHEAVSHGNVEVVK 165 (181)
Q Consensus 93 ~~~~g~-t~L~~a~~~~-----~~~~~~~L~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~t~l~~A~~~~~~~~~~ 165 (181)
+|..|. ||||+|+..+ ..+++++|++ .|+++ +.+|..|.||||+|++.|+.++++
T Consensus 110 ~d~~g~ttpLh~A~~~~~~~~~~~~iv~~Ll~~~gad~------------------~~~d~~G~TpL~~A~~~~~~~~v~ 171 (186)
T 3t8k_A 110 LYKPYKIVVFKNIFNYFVDENEMIPLYKLIFSQSGLQL------------------LIKDKWGLTALEFVKRCQKPIALK 171 (186)
T ss_dssp CBGGGTBCTTGGGGGCCSCHHHHHHHHHHHHTSTTCCT------------------TCCCTTSCCHHHHHHTTTCHHHHH
T ss_pred cCCCcCchHHHHHHHcCCChhhHHHHHHHHHHhcCCCC------------------cccCCCCCCHHHHHHHcCCHHHHH
Confidence 999999 9999999844 3568999999 89988 899999999999999999999999
Q ss_pred HHHHcCCCCCCCcC
Q 041785 166 ILTREDPDYPYSAN 179 (181)
Q Consensus 166 ~Ll~~g~~~~~~~~ 179 (181)
+|.+...+.+.+++
T Consensus 172 ~L~~~~~~~~~~~~ 185 (186)
T 3t8k_A 172 MMEDYIKKYNLKEN 185 (186)
T ss_dssp HHHHHHHHHTCCC-
T ss_pred HHHHHHHHHhcccC
Confidence 99987766666554
No 71
>1n11_A Ankyrin; clathrin, BAND 3, anion exchanger, structural protein; 2.70A {Homo sapiens} SCOP: d.211.1.1
Probab=99.93 E-value=1.6e-25 Score=171.29 Aligned_cols=153 Identities=18% Similarity=0.204 Sum_probs=125.4
Q ss_pred cccCCCHHHHHHHHcCCcHHHHHHHHHhcccccccCCCCchhHHHHhhhhhhhhHHHHHHHHHhhccccccccccCCCcH
Q 041785 21 KQSQMDPNLFKAAADGSVEPFKDMAREVIESSLTVHTKNTILHINIICQETENASTKFVEEILEICPALLLQVNAKGDTP 100 (181)
Q Consensus 21 ~~~~~~t~l~~a~~~g~~~~~~~ll~~~~~~~~~~~~g~t~Lh~a~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~g~t~ 100 (181)
....|.||||+|+..|+.+++++|++.|++++..+..|.||||+| +..|+.+++++|++. +.+++.++..|.||
T Consensus 10 ~~~~g~t~L~~Aa~~g~~~~v~~Ll~~g~~~~~~~~~~~t~L~~A--~~~g~~~~v~~Ll~~----g~~~~~~~~~g~t~ 83 (437)
T 1n11_A 10 GGESGLTPLHVASFMGHLPIVKNLLQRGASPNVSNVKVETPLHMA--ARAGHTEVAKYLLQN----KAKVNAKAKDDQTP 83 (437)
T ss_dssp -----CCHHHHHHHHTCHHHHHHHHHTTCCSCCSSSCCCCHHHHH--HHHTCHHHHHHHHHH----TCCSSCCCTTSCCH
T ss_pred cCCCCCCHHHHHHHCCCHHHHHHHHHcCCCCCCCCCCCCCHHHHH--HHcCCHHHHHHHHhC----CCCCCCCCCCCCCH
Confidence 345789999999999999999999999998888889999999999 999999999999997 88999999999999
Q ss_pred HHHHHHcCCHHHHHHHHHhhhhccCCCCCCcchHHHH---------H------HHhhcccCCCchHHHHHHHcCCHHHHH
Q 041785 101 LHLAAKYSHFDIVRVLIERAQLAQHGDEEPESGIEAF---------R------QMIRMVNNEKNTALHEAVSHGNVEVVK 165 (181)
Q Consensus 101 L~~a~~~~~~~~~~~L~~~~~~~~~~~~~~~~~~~~~---------~------~~~~~~~~~g~t~l~~A~~~~~~~~~~ 165 (181)
||+|+..|+.+++++|++.|+++...+..+....... . ...+..+..|.||||+|+..|+.++++
T Consensus 84 L~~A~~~g~~~~v~~Ll~~ga~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~g~t~L~~A~~~g~~~~v~ 163 (437)
T 1n11_A 84 LHCAARIGHTNMVKLLLENNANPNLATTAGHTPLHIAAREGHVETVLALLEKEASQACMTKKGFTPLHVAAKYGKVRVAE 163 (437)
T ss_dssp HHHHHHHTCHHHHHHHHHHTCCTTCCCTTCCCHHHHHHHHTCHHHHHHHHHTTCCSCCCCTTSCCHHHHHHHTTCHHHHH
T ss_pred HHHHHHCCCHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHhCCCCCcCCCCCCCCHHHHHHHcCCHHHHH
Confidence 9999999999999999999988765555544443322 1 123455678889999999999999999
Q ss_pred HHHHcCCCCCCCcC
Q 041785 166 ILTREDPDYPYSAN 179 (181)
Q Consensus 166 ~Ll~~g~~~~~~~~ 179 (181)
+|+++|++++..+.
T Consensus 164 ~Ll~~g~~~~~~~~ 177 (437)
T 1n11_A 164 LLLERDAHPNAAGK 177 (437)
T ss_dssp HHHHTTCCTTCCCS
T ss_pred HHHhCCCCCCCCCC
Confidence 99999998877654
No 72
>3aaa_C Myotrophin, protein V-1; actin capping protein, barbed END capping, inhibition, prote binding, actin capping, actin-binding, cytoskeleton, ANK RE; 2.20A {Homo sapiens} PDB: 1myo_A 2kxp_C 2myo_A
Probab=99.93 E-value=1.7e-26 Score=147.78 Aligned_cols=112 Identities=18% Similarity=0.153 Sum_probs=104.3
Q ss_pred cCCCHHHHHHHHcCCcHHHHHHHHHhcccccccCCCCchhHHHHhhhhhhhhHHHHHHHHHhhccccccccccCCCcHHH
Q 041785 23 SQMDPNLFKAAADGSVEPFKDMAREVIESSLTVHTKNTILHINIICQETENASTKFVEEILEICPALLLQVNAKGDTPLH 102 (181)
Q Consensus 23 ~~~~t~l~~a~~~g~~~~~~~ll~~~~~~~~~~~~g~t~Lh~a~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~g~t~L~ 102 (181)
..+.||||.|+..|+.+++++|++.+.+++..+..|.||||+| +..++.+++++|++. +++++.+|..|+||||
T Consensus 5 ~~~~~~l~~A~~~~~~~~v~~ll~~~~~~~~~~~~g~t~L~~A--~~~~~~~~v~~Ll~~----g~~~~~~d~~g~tpL~ 78 (123)
T 3aaa_C 5 SMCDKEFMWALKNGDLDEVKDYVAKGEDVNRTLEGGRKPLHYA--ADCGQLEILEFLLLK----GADINAPDKHHITPLL 78 (123)
T ss_dssp --CHHHHHHHHHTTCHHHHHHHHHTTCCTTSCCTTSSCHHHHH--HHTTCHHHHHHHHTT----TCCTTCCCTTSCCHHH
T ss_pred cccchHHHHHHHcCCHHHHHHHHHcCCCcCccCCCCCcHHHHH--HHcCCHHHHHHHHHc----CCCCCcCCCCCCCHHH
Confidence 4578999999999999999999999999988899999999999 999999999999986 9999999999999999
Q ss_pred HHHHcCCHHHHHHHHHhhhhccCCCCCCcchHHHHHHHhhcccCCCchHHHHHHHc
Q 041785 103 LAAKYSHFDIVRVLIERAQLAQHGDEEPESGIEAFRQMIRMVNNEKNTALHEAVSH 158 (181)
Q Consensus 103 ~a~~~~~~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~t~l~~A~~~ 158 (181)
+|+..++.+++++|++.|+++ +.+|..|.||+++|...
T Consensus 79 ~A~~~~~~~~v~~Ll~~ga~~------------------~~~~~~g~t~l~~A~~~ 116 (123)
T 3aaa_C 79 SAVYEGHVSCVKLLLSKGADK------------------TVKGPDGLTAFEATDNQ 116 (123)
T ss_dssp HHHHHTCHHHHHHHHHTTCCT------------------TCCCTTSCCHHHHCCCH
T ss_pred HHHHcCCHHHHHHHHHcCCCC------------------CCcCCCCCCHHHHhCCH
Confidence 999999999999999999988 88999999999999443
No 73
>3hra_A Ankyrin repeat family protein; structural protein; 1.69A {Enterococcus faecalis}
Probab=99.93 E-value=2.5e-25 Score=153.43 Aligned_cols=132 Identities=19% Similarity=0.215 Sum_probs=121.1
Q ss_pred CCCHHHHHHHHcCCcHHHHHHHHHhc-ccccccCCCCchhHHHHhhhhhhhhHHHHHHHHHhhccccccccccCCCcHHH
Q 041785 24 QMDPNLFKAAADGSVEPFKDMAREVI-ESSLTVHTKNTILHINIICQETENASTKFVEEILEICPALLLQVNAKGDTPLH 102 (181)
Q Consensus 24 ~~~t~l~~a~~~g~~~~~~~ll~~~~-~~~~~~~~g~t~Lh~a~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~g~t~L~ 102 (181)
.+.||||.|+..|+.+.++.|+..+. +++..+..|.||||+| +..++.+++++|++. +++++.++..|.||||
T Consensus 4 ~~~~~L~~A~~~g~~~~v~~ll~~~~~~~~~~~~~g~t~L~~A--~~~~~~~~v~~Ll~~----g~~~~~~~~~g~t~l~ 77 (201)
T 3hra_A 4 YEVGALLEAANQRDTKKVKEILQDTTYQVDEVDTEGNTPLNIA--VHNNDIEIAKALIDR----GADINLQNSISDSPYL 77 (201)
T ss_dssp CCTTHHHHHHHTTCHHHHHHHHTCTTCCTTCCCTTSCCHHHHH--HHHTCHHHHHHHHHT----TCCTTCCCTTSCCHHH
T ss_pred ccccHHHHHHHhccHHHHHHHHHcCCCCCCCCCCCCCCHHHHH--HHcCCHHHHHHHHHc----CCCCCCCCCCCCCHHH
Confidence 56799999999999999999999765 7778899999999999 999999999999997 9999999999999999
Q ss_pred HHHHcCCHHHHHHHHHhh-hhccCCCCCCcchHHHHHHHhhcccCCCchHHHHHHHcCCHHHHHHHHHcC-CCCCCCcC
Q 041785 103 LAAKYSHFDIVRVLIERA-QLAQHGDEEPESGIEAFRQMIRMVNNEKNTALHEAVSHGNVEVVKILTRED-PDYPYSAN 179 (181)
Q Consensus 103 ~a~~~~~~~~~~~L~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~g~t~l~~A~~~~~~~~~~~Ll~~g-~~~~~~~~ 179 (181)
+|+..++.+++++|++.+ .++ +.++..|.||||+|+..|+.+++++|+++| ++++.++.
T Consensus 78 ~A~~~~~~~~~~~Ll~~~~~~~------------------~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~ 138 (201)
T 3hra_A 78 YAGAQGRTEILAYMLKHATPDL------------------NKHNRYGGNALIPAAEKGHIDNVKLLLEDGREDIDFQND 138 (201)
T ss_dssp HHHHTTCHHHHHHHHHHSCCCT------------------TCCCTTSCCSHHHHHHTTCHHHHHHHHHHCCCCTTCCCT
T ss_pred HHHHcCCHHHHHHHHhccCccc------------------ccccCCCCcHHHHHHHcCCHHHHHHHHHcCCCCcCCCCC
Confidence 999999999999999654 454 788999999999999999999999999999 88887764
No 74
>3jxi_A Vanilloid receptor-related osmotically activated protein; ankyrin repeats, ANK repeat, ION transport, ionic channel, R transmembrane, transport; 2.30A {Gallus gallus} PDB: 3jxj_A 4dx1_A 4dx2_A*
Probab=99.93 E-value=4.6e-26 Score=163.16 Aligned_cols=128 Identities=22% Similarity=0.168 Sum_probs=116.0
Q ss_pred cCCCHHHHHHH---HcCCcHHHHHHHHHhccc-----------ccccCCCCchhHHHHhhhhhhhhHHHHHHHHHhhccc
Q 041785 23 SQMDPNLFKAA---ADGSVEPFKDMAREVIES-----------SLTVHTKNTILHINIICQETENASTKFVEEILEICPA 88 (181)
Q Consensus 23 ~~~~t~l~~a~---~~g~~~~~~~ll~~~~~~-----------~~~~~~g~t~Lh~a~~~~~~~~~~~~~l~~~~~~~~~ 88 (181)
..|.||||+|+ ..|+.+++++|++.|.+. ...+..|.||||+| +..++.+++++|++. |+
T Consensus 44 ~~g~t~L~~A~~~~~~g~~~~v~~Ll~~g~~~~~~~~~~~~~~~~~d~~g~t~L~~A--~~~g~~~~v~~Ll~~----ga 117 (260)
T 3jxi_A 44 STGKTCLPKALLNLSAGRNDTIPILLDIAEKTGNMREFINSPFRDVYYRGQTALHIA--IERRCKHYVELLVEK----GA 117 (260)
T ss_dssp TTCCCHHHHHHTSCBTTBCTHHHHHHHHHHHTTCHHHHHTCCBCCSSEESBCHHHHH--HHTTCHHHHHHHHHT----TC
T ss_pred CCCCcHHHHHHHHhhcCCHHHHHHHHHhcccccchHhhhcccccccccCCCCHHHHH--HHcCCHHHHHHHHhC----CC
Confidence 56999999999 779999999999987542 23455899999999 999999999999997 99
Q ss_pred cccccc--------------cCCCcHHHHHHHcCCHHHHHHHHH---hhhhccCCCCCCcchHHHHHHHhhcccCCCchH
Q 041785 89 LLLQVN--------------AKGDTPLHLAAKYSHFDIVRVLIE---RAQLAQHGDEEPESGIEAFRQMIRMVNNEKNTA 151 (181)
Q Consensus 89 ~~~~~~--------------~~g~t~L~~a~~~~~~~~~~~L~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~t~ 151 (181)
+++.++ ..|.||||+|+..|+.+++++|++ .|+++ +.+|..|+||
T Consensus 118 ~~~~~~~~~~~~~~~~~~~~~~g~tpL~~A~~~g~~~~v~~Ll~~~~~ga~~------------------~~~d~~g~Tp 179 (260)
T 3jxi_A 118 DVHAQARGRFFQPKDEGGYFYFGELPLSLAACTNQPHIVHYLTENGHKQADL------------------RRQDSRGNTV 179 (260)
T ss_dssp CTTCCCEECCCSSSCCCCSCCSCSSHHHHHHHTTCHHHHHHHHHCSSCCCCT------------------TCCCTTSCCH
T ss_pred CcCccccccccCcccccccccCCCCHHHHHHHcCCHHHHHHHHhccccCCCC------------------cccCCCCCcH
Confidence 999988 589999999999999999999999 88887 8999999999
Q ss_pred HHHHHHcCC---------HHHHHHHHHcCCCC
Q 041785 152 LHEAVSHGN---------VEVVKILTREDPDY 174 (181)
Q Consensus 152 l~~A~~~~~---------~~~~~~Ll~~g~~~ 174 (181)
||+|+..++ .+++++|+++|+++
T Consensus 180 Lh~A~~~~~~~~~~~~~~~~~v~~Ll~~ga~~ 211 (260)
T 3jxi_A 180 LHALVAIADNTRENTKFVTKMYDLLLIKCAKL 211 (260)
T ss_dssp HHHHHHHCCSSHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHhccCchhHHHHHHHHHHHHHHhCccc
Confidence 999999887 79999999999988
No 75
>2pnn_A Transient receptor potential cation channel subfa member 1; TRPV1, ankyrin repeat domain, transport protein; HET: ATP; 2.70A {Rattus norvegicus} PDB: 2nyj_A*
Probab=99.93 E-value=1.1e-25 Score=162.29 Aligned_cols=131 Identities=18% Similarity=0.180 Sum_probs=118.7
Q ss_pred cccCCCHHHHHHHHc---CCcHHHHHHHHHhccc-------c----cccCCCCchhHHHHhhhhhhhhHHHHHHHHHhhc
Q 041785 21 KQSQMDPNLFKAAAD---GSVEPFKDMAREVIES-------S----LTVHTKNTILHINIICQETENASTKFVEEILEIC 86 (181)
Q Consensus 21 ~~~~~~t~l~~a~~~---g~~~~~~~ll~~~~~~-------~----~~~~~g~t~Lh~a~~~~~~~~~~~~~l~~~~~~~ 86 (181)
....|.||||+|+.. |+.+++++|++.|++. + ..+..|.||||+| +..++.+++++|++.
T Consensus 50 ~~~~g~tpL~~A~~~~~~g~~~~v~~Ll~~ga~~~~~~~~i~~~~~~~d~~g~tpL~~A--~~~g~~~~v~~Ll~~---- 123 (273)
T 2pnn_A 50 DPETGKTCLLKAMLNLHNGQNDTIALLLDVARKTDSLKQFVNASYTDSYYKGQTALHIA--IERRNMTLVTLLVEN---- 123 (273)
T ss_dssp CTTTCCCHHHHHHHSCBTTBCHHHHHHHHHHHHTTCHHHHHTCCCCSTTTTTCCHHHHH--HHTTCHHHHHHHHHT----
T ss_pred cCcCCCCHHHHHHHHHhcCChHHHHHHHHhhccccchhHHhhcccccccCCCCCHHHHH--HHcCCHHHHHHHHHC----
Confidence 356799999999987 9999999999988652 2 1456899999999 999999999999997
Q ss_pred ccccccccc--------------CCCcHHHHHHHcCCHHHHHHHHH---hhhhccCCCCCCcchHHHHHHHhhcccCCCc
Q 041785 87 PALLLQVNA--------------KGDTPLHLAAKYSHFDIVRVLIE---RAQLAQHGDEEPESGIEAFRQMIRMVNNEKN 149 (181)
Q Consensus 87 ~~~~~~~~~--------------~g~t~L~~a~~~~~~~~~~~L~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~ 149 (181)
+++++.++. .|.||||+|+..|+.+++++|++ .|+++ +.+|..|+
T Consensus 124 ga~~~~~~~~~~~~~~~~~~~~~~g~tpL~~A~~~g~~~~v~~Ll~~~~~gad~------------------~~~d~~g~ 185 (273)
T 2pnn_A 124 GADVQAAANGDFFKKTKGRPGFYFGELPLSLAACTNQLAIVKFLLQNSWQPADI------------------SARDSVGN 185 (273)
T ss_dssp TCCTTCCBCSGGGSSCSSSCCCCSCBSHHHHHHHTTCHHHHHHHHHCSSCCCCT------------------TCCCTTSC
T ss_pred CCCcCccccccccccccccccccCCCCHHHHHHHcCCHHHHHHHHhcccCCCCc------------------eeeCCCCC
Confidence 899999886 79999999999999999999999 88887 89999999
Q ss_pred hHHHHHHHcCC---------HHHHHHHHHcCCCCC
Q 041785 150 TALHEAVSHGN---------VEVVKILTREDPDYP 175 (181)
Q Consensus 150 t~l~~A~~~~~---------~~~~~~Ll~~g~~~~ 175 (181)
||||+|+..|+ .+++++|+++|++++
T Consensus 186 tpLh~A~~~~~~~~~~~~~~~~~v~~Ll~~ga~~n 220 (273)
T 2pnn_A 186 TVLHALVEVADNTVDNTKFVTSMYNEILILGAKLH 220 (273)
T ss_dssp CHHHHHHHHCCSCHHHHHHHHHHHHHHHHHHHHHC
T ss_pred cHHHHHHHccCcchhHHHHHHHHHHHHHHhhhhcc
Confidence 99999999988 799999999999886
No 76
>4b93_B Ankyrin repeat domain-containing protein 27; endocytosis, exocytosis, snare; 2.00A {Homo sapiens}
Probab=99.93 E-value=6.3e-26 Score=163.63 Aligned_cols=135 Identities=20% Similarity=0.235 Sum_probs=104.5
Q ss_pred cccCCCHHHHHHHHcCCcH-HHHHHHHHhcccccccCCCCchhHHHHhhhhhhhhHHHHHHHHHhhccccccccccCCCc
Q 041785 21 KQSQMDPNLFKAAADGSVE-PFKDMAREVIESSLTVHTKNTILHINIICQETENASTKFVEEILEICPALLLQVNAKGDT 99 (181)
Q Consensus 21 ~~~~~~t~l~~a~~~g~~~-~~~~ll~~~~~~~~~~~~g~t~Lh~a~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~g~t 99 (181)
....+.|||+.|+..+... +++.|++.|++++.++..|.||||+| +..|+.+++++|+.. +++++.++..|.|
T Consensus 48 ~~~~~~t~L~~a~~~~~~~~~v~~Ll~~Gadvn~~d~~G~TpLh~A--~~~g~~~~v~~Ll~~----~a~~~~~~~~g~t 121 (269)
T 4b93_B 48 ADPEFCHPLCQCPKCAPAQKRLAKVPASGLGVNVTSQDGSSPLHVA--ALHGRADLIPLLLKH----GANAGARNADQAV 121 (269)
T ss_dssp ---------------------------CCCCTTCCCTTSCCHHHHH--HHTTCTTHHHHHHHT----TCCTTCCCTTCCC
T ss_pred cCccCCCHHHHHHHhCCHHHHHHHHHHCCCCCCCcCCCCCCHHHHH--HHcCcHHHHHHHHhc----CCCcCccCCCCCC
Confidence 3456789999999888764 78899999999999999999999999 999999999999987 8999999999999
Q ss_pred HHHHHHHcCCHHHHHHHHHhhhhccCCCCCCcchHHHHHHHhhcccCCCchHHHHHHHcCCHHHHHHHHHcCCCCCCCcC
Q 041785 100 PLHLAAKYSHFDIVRVLIERAQLAQHGDEEPESGIEAFRQMIRMVNNEKNTALHEAVSHGNVEVVKILTREDPDYPYSAN 179 (181)
Q Consensus 100 ~L~~a~~~~~~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~t~l~~A~~~~~~~~~~~Ll~~g~~~~~~~~ 179 (181)
|+|+|+..++.+++++|++.|+++ +.+|..|+||||+|+..|+.+++++|+++|++++..+.
T Consensus 122 ~l~~a~~~~~~~~~~~Ll~~g~~~------------------n~~d~~g~TpL~~A~~~g~~~~v~~Ll~~gadvn~~~~ 183 (269)
T 4b93_B 122 PLHLACQQGHFQVVKCLLDSNAKP------------------NKKDLSGNTPLIYACSGGHHELVALLLQHGASINASNN 183 (269)
T ss_dssp HHHHHHHHTCHHHHHHHHHTTCCS------------------CCCCTTCCCHHHHHHHTTCGGGHHHHHHTTCCTTCBCT
T ss_pred ccccccccChHHHHHHHHHCCCCC------------------CCCCCCCCCHHHHHHHCCCHHHHHHHHHCCCCCCcccc
Confidence 999999999999999999999988 88999999999999999999999999999999988765
No 77
>4g8k_A 2-5A-dependent ribonuclease; ankyrin-repeat domain, single-stranded RNA, hydrolase; 2.40A {Homo sapiens} PDB: 4g8l_A*
Probab=99.93 E-value=4.1e-25 Score=163.80 Aligned_cols=132 Identities=21% Similarity=0.214 Sum_probs=107.7
Q ss_pred ccCCCHHHHHHHHcCCcHHHHHHHHH-hcccccccCCCCchhHHHHhhhhhh----hhHHHHHHHHHhhccccccccccC
Q 041785 22 QSQMDPNLFKAAADGSVEPFKDMARE-VIESSLTVHTKNTILHINIICQETE----NASTKFVEEILEICPALLLQVNAK 96 (181)
Q Consensus 22 ~~~~~t~l~~a~~~g~~~~~~~ll~~-~~~~~~~~~~g~t~Lh~a~~~~~~~----~~~~~~l~~~~~~~~~~~~~~~~~ 96 (181)
...|.||||+|+..|+.+++++|+++ |++++.++..|.+++|.+ +..+. ..++++|++. |++++.++..
T Consensus 165 ~~~g~T~L~~A~~~g~~~~v~~LL~~~gad~n~~d~~g~t~l~~~--~~~~~~~~~~~i~~lLl~~----gad~n~~d~~ 238 (337)
T 4g8k_A 165 RKGGATALMDAAEKGHVEVLKILLDEMGADVNACDNMGRNALIHA--LLSSDDSDVEAITHLLLDH----GADVNVRGER 238 (337)
T ss_dssp TTCSCCHHHHHHHHTCHHHHHHHHHHSCCCTTCCCTTSCCHHHHH--HHHSCTTTHHHHHHHHHHT----TCCTTCCCGG
T ss_pred cCCCCcHHHHHHHCCCHHHHHHHHhccCCCcCccCCCCCcHHHHH--HHHcCcccHHHHHHHHHHC----CCCCCCcCCC
Confidence 45688999999999999999999974 888888899999999887 54333 2455666664 8999999999
Q ss_pred CCcHHHHHHHcCCHHHHHHHHHh-hhhccCCCCCCcchHHHHHHHhhcccCCCchHHHHHHHcCCHHHHHHHHHcCCCCC
Q 041785 97 GDTPLHLAAKYSHFDIVRVLIER-AQLAQHGDEEPESGIEAFRQMIRMVNNEKNTALHEAVSHGNVEVVKILTREDPDYP 175 (181)
Q Consensus 97 g~t~L~~a~~~~~~~~~~~L~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~t~l~~A~~~~~~~~~~~Ll~~g~~~~ 175 (181)
|+||||+|+..++.++++.|++. +.++ +.+|..|+||||+|+..|+.+++++|+++|++++
T Consensus 239 g~t~L~~a~~~~~~~~v~~Ll~~~~~~v------------------n~~d~~G~TpL~~A~~~g~~~iv~~Ll~~GAd~n 300 (337)
T 4g8k_A 239 GKTPLILAVEKKHLGLVQRLLEQEHIEI------------------NDTDSDGKTALLLAVELKLKKIAELLCKRGASTD 300 (337)
T ss_dssp GCCHHHHHHHTTCHHHHHHHHTSTTCCT------------------TCBCTTSCBHHHHHHHTTCHHHHHHHHTTSCSST
T ss_pred CCCHHHHHHHhhhhHHHHHHHHhcCCcc------------------cCcCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCC
Confidence 99999999999999999998875 5565 7778888888888888888888888888888876
Q ss_pred CC
Q 041785 176 YS 177 (181)
Q Consensus 176 ~~ 177 (181)
.+
T Consensus 301 ~~ 302 (337)
T 4g8k_A 301 CG 302 (337)
T ss_dssp TC
T ss_pred CC
Confidence 54
No 78
>1wdy_A 2-5A-dependent ribonuclease; hydrolase, RNA-binding; HET: 25A; 1.80A {Homo sapiens} SCOP: d.211.1.1
Probab=99.93 E-value=9.1e-25 Score=157.64 Aligned_cols=152 Identities=13% Similarity=0.072 Sum_probs=121.6
Q ss_pred ccCCCHHHHHHHHcCCcHHHHHHHHHhcccccccCCCCchhHHHHhhhhhhhhHHHHHHHHHhhccccccccccCCCcHH
Q 041785 22 QSQMDPNLFKAAADGSVEPFKDMAREVIESSLTVHTKNTILHINIICQETENASTKFVEEILEICPALLLQVNAKGDTPL 101 (181)
Q Consensus 22 ~~~~~t~l~~a~~~g~~~~~~~ll~~~~~~~~~~~~g~t~Lh~a~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~g~t~L 101 (181)
...|.||||+|+..|+.+++++|++.|++++..+..|.||||+| +..++.+++++|++. +.+++.++..|.|||
T Consensus 36 ~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A--~~~~~~~~v~~Ll~~----g~~~~~~~~~g~t~L 109 (285)
T 1wdy_A 36 EEGGWTPLHNAVQMSREDIVELLLRHGADPVLRKKNGATPFLLA--AIAGSVKLLKLFLSK----GADVNECDFYGFTAF 109 (285)
T ss_dssp TTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTCCCHHHHH--HHHTCHHHHHHHHHT----TCCTTCBCTTCCBHH
T ss_pred CCCCCcHHHHHHHcCCHHHHHHHHHcCCCCcccCCCCCCHHHHH--HHcCCHHHHHHHHHc----CCCCCccCcccCCHH
Confidence 45688999999999999999999999999988899999999999 999999999999997 899999999999999
Q ss_pred HHHHHcCCHHHHHHHHHhhhhccCCC----------CCCcchHHHH----------------HHHhhcccCCCchHHHHH
Q 041785 102 HLAAKYSHFDIVRVLIERAQLAQHGD----------EEPESGIEAF----------------RQMIRMVNNEKNTALHEA 155 (181)
Q Consensus 102 ~~a~~~~~~~~~~~L~~~~~~~~~~~----------~~~~~~~~~~----------------~~~~~~~~~~g~t~l~~A 155 (181)
|+|+..++.+++++|++.|+++.... ..+....... +..++.++..|+||||+|
T Consensus 110 ~~A~~~~~~~~~~~Ll~~g~~~~~~~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~g~t~l~~a 189 (285)
T 1wdy_A 110 MEAAVYGKVKALKFLYKRGANVNLRRKTKEDQERLRKGGATALMDAAEKGHVEVLKILLDEMGADVNACDNMGRNALIHA 189 (285)
T ss_dssp HHHHHTTCHHHHHHHHHTTCCTTCCCCCCHHHHHTTCCCCCHHHHHHHHTCHHHHHHHHHTSCCCTTCCCTTSCCHHHHH
T ss_pred HHHHHhCCHHHHHHHHHhCCCcccccccHHHHHhhccCCCcHHHHHHHcCCHHHHHHHHHhcCCCCCccCCCCCCHHHHH
Confidence 99999999999999999998774432 1122221111 123345566777777777
Q ss_pred HHcCC----HHHHHHHHHcCCCCCCCcC
Q 041785 156 VSHGN----VEVVKILTREDPDYPYSAN 179 (181)
Q Consensus 156 ~~~~~----~~~~~~Ll~~g~~~~~~~~ 179 (181)
+..++ .+++++|+++|++++.++.
T Consensus 190 ~~~~~~~~~~~i~~~Ll~~g~~~~~~~~ 217 (285)
T 1wdy_A 190 LLSSDDSDVEAITHLLLDHGADVNVRGE 217 (285)
T ss_dssp HHCSCTTTHHHHHHHHHHTTCCSSCCCT
T ss_pred HHccccchHHHHHHHHHHcCCCCCCcCC
Confidence 77777 7777777777777766543
No 79
>3lvq_E ARF-GAP with SH3 domain, ANK repeat and PH domain containing protein 3, ADP-ribosylation...; GDP, ASAP3, UPLC1, linkers, alternat splicing; HET: GDP; 3.38A {Homo sapiens} PDB: 3lvr_E*
Probab=99.93 E-value=3.9e-25 Score=171.96 Aligned_cols=127 Identities=20% Similarity=0.225 Sum_probs=116.6
Q ss_pred HHHHHHHHcCCcHHHHHHHHHhcccccc------cCCCCchhHHHHhhh---hhhhhHHHHHHHHHhhccccccccccCC
Q 041785 27 PNLFKAAADGSVEPFKDMAREVIESSLT------VHTKNTILHINIICQ---ETENASTKFVEEILEICPALLLQVNAKG 97 (181)
Q Consensus 27 t~l~~a~~~g~~~~~~~ll~~~~~~~~~------~~~g~t~Lh~a~~~~---~~~~~~~~~l~~~~~~~~~~~~~~~~~g 97 (181)
+.||.|+..|+.+.++.|++.|++++.. +..|.||||+| +. .++.+++++|++. |++++.+|..|
T Consensus 134 ~~L~~A~~~g~~~~v~~ll~~g~~~n~~~~~~~~~~~g~t~Lh~A--~~~a~~g~~~~v~~Ll~~----ga~vn~~d~~g 207 (497)
T 3lvq_E 134 QRLWTAICNRDLLSVLEAFANGQDFGQPLPGPDAQAPEELVLHLA--VKVANQASLPLVDFIIQN----GGHLDAKAADG 207 (497)
T ss_dssp HHHHHHHHHTCHHHHHHHHHTTCCSSSCBCCSSSCCSCBCHHHHH--HHTCCTTTHHHHHHHHHH----SCCTTCCCSSS
T ss_pred HHHHHHHhccCHHHHHHHHhhcccccCCCCCcccccccchHHHHH--HHhcccccHHHHHHHHHc----CCCCCccCCCC
Confidence 6799999999999999999999988755 78899999999 65 8999999999998 99999999999
Q ss_pred CcHHHHHHHcCCHHHHHHHHHhhhhccCCCCCCcchHHHHHHHhhcccCCCchHHHHHHHcCCHHHHHHHHHcCCCCCCC
Q 041785 98 DTPLHLAAKYSHFDIVRVLIERAQLAQHGDEEPESGIEAFRQMIRMVNNEKNTALHEAVSHGNVEVVKILTREDPDYPYS 177 (181)
Q Consensus 98 ~t~L~~a~~~~~~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~t~l~~A~~~~~~~~~~~Ll~~g~~~~~~ 177 (181)
+||||+|+..|+.+++++|++.|+++ +.+|..|+||||+|+..|+.+++++|+++|++++..
T Consensus 208 ~TpLh~A~~~g~~~~v~~Ll~~ga~~------------------~~~d~~g~tpl~~A~~~~~~~~~~~Ll~~ga~~~~~ 269 (497)
T 3lvq_E 208 NTALHYAALYNQPDCLKLLLKGRALV------------------GTVNEAGETALDIARKKHHKECEELLEQAQAGTFAF 269 (497)
T ss_dssp CCHHHHHTTTTCHHHHHHHHHTCCCC------------------SCCCTTCCCHHHHHHHTTCHHHHHHHHHTCC-----
T ss_pred CcHHHHHHHcCCHHHHHHHHHcCCCC------------------CCcCCCCCCHHHHHHHcCCHHHHHHHHHhCCCCCCC
Confidence 99999999999999999999999998 899999999999999999999999999999998754
No 80
>3eu9_A Huntingtin-interacting protein 14; epigenetics, ankyrin repeats, methyllyine binding, huntingti interacting protein 14, acyltransferase, ANK repeat; HET: HIS; 1.99A {Homo sapiens}
Probab=99.93 E-value=1.3e-24 Score=153.34 Aligned_cols=152 Identities=21% Similarity=0.171 Sum_probs=127.3
Q ss_pred ccCCCHHHHHHHHcCCcHHHHHHHHHhccccc-ccCCCCchhHHHHhhhhhhhhHHHHHHHHHhhccccccccccCCCcH
Q 041785 22 QSQMDPNLFKAAADGSVEPFKDMAREVIESSL-TVHTKNTILHINIICQETENASTKFVEEILEICPALLLQVNAKGDTP 100 (181)
Q Consensus 22 ~~~~~t~l~~a~~~g~~~~~~~ll~~~~~~~~-~~~~g~t~Lh~a~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~g~t~ 100 (181)
...|.||||+|+..|+.+++++|++.+.+... .+..|.||||+| +..++.+++++|++. +.+++.++..|.||
T Consensus 39 ~~~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~t~L~~A--~~~~~~~~v~~Ll~~----g~~~~~~~~~g~t~ 112 (240)
T 3eu9_A 39 DKENVTLLHWAAINNRIDLVKYYISKGAIVDQLGGDLNSTPLHWA--TRQGHLSMVVQLMKY----GADPSLIDGEGCSC 112 (240)
T ss_dssp CTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCBTTTTBCHHHHH--HHHTCHHHHHHHHHT----TCCTTCCCTTSCCH
T ss_pred CCCCCCHHHHHHHhCCHHHHHHHHHcCCcchhhcCCcCCChhHHH--HHcCCHHHHHHHHHc----CCCCcccCCCCCCH
Confidence 45688999999999999999999999888763 445599999999 999999999999986 89999999999999
Q ss_pred HHHHHHcCCHHHHHHHHHhhhhccCCCCCCcchHHHH----------------HHHhhcccC-CCchHHHHHHHcCCHHH
Q 041785 101 LHLAAKYSHFDIVRVLIERAQLAQHGDEEPESGIEAF----------------RQMIRMVNN-EKNTALHEAVSHGNVEV 163 (181)
Q Consensus 101 L~~a~~~~~~~~~~~L~~~~~~~~~~~~~~~~~~~~~----------------~~~~~~~~~-~g~t~l~~A~~~~~~~~ 163 (181)
||+|+..++.+++++|++.|.++...+..+....... +.+++..+. .|.||||+|+..|+.++
T Consensus 113 l~~A~~~~~~~~~~~Ll~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~~L~~~~~~~~~~~~~~g~t~L~~A~~~~~~~~ 192 (240)
T 3eu9_A 113 IHLAAQFGHTSIVAYLIAKGQDVDMMDQNGMTPLMWAAYRTHSVDPTRLLLTFNVSVNLGDKYHKNTALHWAVLAGNTTV 192 (240)
T ss_dssp HHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHHCCSSTTHHHHHHTTCCTTCCCTTTCCCHHHHHHHHTCHHH
T ss_pred HHHHHHcCHHHHHHHHHhcCCCccccCCCCCcHHHHHHHhCChHHHHHHHHhcCCCcchhhccCCCcHHHHHHHcCCHHH
Confidence 9999999999999999999988765555444433222 133455665 89999999999999999
Q ss_pred HHHHHHcCCCCCCCcC
Q 041785 164 VKILTREDPDYPYSAN 179 (181)
Q Consensus 164 ~~~Ll~~g~~~~~~~~ 179 (181)
+++|+++|++++..+.
T Consensus 193 v~~Ll~~g~~~~~~~~ 208 (240)
T 3eu9_A 193 ISLLLEAGANVDAQNI 208 (240)
T ss_dssp HHHHHHHTCCTTCBCT
T ss_pred HHHHHHcCCCCCCcCC
Confidence 9999999999987754
No 81
>3deo_A Signal recognition particle 43 kDa protein; chloroplast SRP system, signal sequence, ankyrin repeat, chromodomain, type I turn; 1.50A {Arabidopsis thaliana} SCOP: b.34.13.2 k.37.1.1 PDB: 3dep_A 1x32_A
Probab=99.92 E-value=2.5e-25 Score=151.80 Aligned_cols=124 Identities=20% Similarity=0.213 Sum_probs=109.0
Q ss_pred ccCCCHHHHHHHHcCCcHHHHHHHHHhcccccccCCCCchhHHHHhhhhhhhhHHHHHHHHHhhccccccccc-cCCCcH
Q 041785 22 QSQMDPNLFKAAADGSVEPFKDMAREVIESSLTVHTKNTILHINIICQETENASTKFVEEILEICPALLLQVN-AKGDTP 100 (181)
Q Consensus 22 ~~~~~t~l~~a~~~g~~~~~~~ll~~~~~~~~~~~~g~t~Lh~a~~~~~~~~~~~~~l~~~~~~~~~~~~~~~-~~g~t~ 100 (181)
...|.||||.|+..|+.++++.|++ +.+++..+..|.||||+| +..++.+++++|++. +++++.++ ..|+||
T Consensus 41 ~~~g~t~L~~A~~~g~~~~v~~Ll~-~~~~~~~d~~g~t~L~~A--~~~~~~~~v~~Ll~~----ga~~~~~~~~~g~tp 113 (183)
T 3deo_A 41 VSEYETPWWTAARKADEQALSQLLE-DRDVDAVDENGRTALLFV--AGLGSDKCVRLLAEA----GADLDHRDMRGGLTA 113 (183)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHTT-TSCTTCCCTTSCCHHHHH--HHHTCHHHHHHHHHT----TCCTTCCCSSSSCCH
T ss_pred CCCCCCHHHHHHHcCCHHHHHHHHh-cCCCCCcCCCCCCHHHHH--HHcCCHHHHHHHHHc----CCCCCcCCCCCCCCH
Confidence 3467899999999999999999999 988888999999999999 999999999999997 99999988 899999
Q ss_pred HHHHHHcCCHHHHHHHHHhhhhccCCCCCCcchHHHHHHHhhcccCCCchHHHHHHHc----------------CCHHHH
Q 041785 101 LHLAAKYSHFDIVRVLIERAQLAQHGDEEPESGIEAFRQMIRMVNNEKNTALHEAVSH----------------GNVEVV 164 (181)
Q Consensus 101 L~~a~~~~~~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~t~l~~A~~~----------------~~~~~~ 164 (181)
||+|+..++.+++++|++.|+++ +.+|..|+||||+|+.. |..+++
T Consensus 114 L~~A~~~~~~~~v~~Ll~~ga~~------------------~~~d~~g~tpl~~A~~~~~~~~~~~~l~~a~~~~~~~i~ 175 (183)
T 3deo_A 114 LHMAAGYVRPEVVEALVELGADI------------------EVEDERGLTALELAREILKTTPKGNPMQFGRRIGLEKVI 175 (183)
T ss_dssp HHHHHHTTCHHHHHHHHHHTCCT------------------TCCCTTSCCHHHHHHHHHHTCCCCSHHHHHHHHHHHHHH
T ss_pred HHHHHhcCcHHHHHHHHHcCCCC------------------cCCCCCCCCHHHHHHHhccCcccccHHHHHHHcCHHHHH
Confidence 99999999999999999999988 66677777777766654 556777
Q ss_pred HHHHHc
Q 041785 165 KILTRE 170 (181)
Q Consensus 165 ~~Ll~~ 170 (181)
++|.++
T Consensus 176 ~~L~~~ 181 (183)
T 3deo_A 176 NVLEGQ 181 (183)
T ss_dssp HHHHTC
T ss_pred HHHHHh
Confidence 777643
No 82
>1dcq_A PYK2-associated protein beta; zinc-binding module, ankyrin repeats, metal binding protein; 2.10A {Mus musculus} SCOP: d.211.1.1 g.45.1.1
Probab=99.92 E-value=1.4e-24 Score=157.23 Aligned_cols=125 Identities=16% Similarity=0.161 Sum_probs=116.6
Q ss_pred CHHHHHHHHcCCcHHHHHHHHHhcccc------cccCCCCchhHHHHhhhh---hhhhHHHHHHHHHhhccccccccccC
Q 041785 26 DPNLFKAAADGSVEPFKDMAREVIESS------LTVHTKNTILHINIICQE---TENASTKFVEEILEICPALLLQVNAK 96 (181)
Q Consensus 26 ~t~l~~a~~~g~~~~~~~ll~~~~~~~------~~~~~g~t~Lh~a~~~~~---~~~~~~~~l~~~~~~~~~~~~~~~~~ 96 (181)
.++|+.|+..|+.+.++.++..|.+.+ ..+..|.||||+| +.. ++.+++++|++. |++++.+|..
T Consensus 131 l~~l~~a~~~~d~~~~~~ll~~g~~~~~~~~l~~~~~~g~t~Lh~A--~~~~~~~~~~~v~~Ll~~----ga~in~~d~~ 204 (278)
T 1dcq_A 131 LHSLCEAVKTRDIFGLLQAYADGVDLTEKIPLANGHEPDETALHLA--VRSVDRTSLHIVDFLVQN----SGNLDKQTGK 204 (278)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHTTCCTTSBCCCSSCSSTTCBHHHHH--HHHCCTTTHHHHHHHHHH----CSCTTCCCTT
T ss_pred hhhhhhHhhhcccHHHHHHHHhhcchhhhccccccccCCCCcchHH--HHhcccchHHHHHHHHHC----CCCccccCCC
Confidence 368999999999999999999988754 3478899999999 888 899999999998 9999999999
Q ss_pred CCcHHHHHHHcCCHHHHHHHHHhhhhccCCCCCCcchHHHHHHHhhcccCCCchHHHHHHHcCCHHHHHHHHHcCCCC
Q 041785 97 GDTPLHLAAKYSHFDIVRVLIERAQLAQHGDEEPESGIEAFRQMIRMVNNEKNTALHEAVSHGNVEVVKILTREDPDY 174 (181)
Q Consensus 97 g~t~L~~a~~~~~~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~t~l~~A~~~~~~~~~~~Ll~~g~~~ 174 (181)
|+||||+|+..|+.+++++|++.|+++ +.+|..|.||||+|+..|+.+++++|+++|++.
T Consensus 205 g~TpLh~A~~~g~~~~v~~Ll~~gad~------------------~~~d~~g~tpL~~A~~~~~~~~v~~Ll~~ga~~ 264 (278)
T 1dcq_A 205 GSTALHYCCLTDNAECLKLLLRGKASI------------------EIANESGETPLDIAKRLKHEHCEELLTQALSGR 264 (278)
T ss_dssp CCCHHHHHHHTTCHHHHHHHHHTTCCT------------------TCCCTTSCCHHHHHHHTTCHHHHHHHHHHHTTC
T ss_pred CCCHHHHHHHcCCHHHHHHHHHcCCCC------------------CCccCCCCCHHHHHHHcCCHHHHHHHHHcCCCC
Confidence 999999999999999999999999998 899999999999999999999999999999874
No 83
>2fo1_E LIN-12 protein; beta-barrel, protein-DNA complex, double helix, ankyrin repeat, gene regulation/signalling protein/DNA complex; 3.12A {Caenorhabditis elegans} SCOP: d.211.1.1
Probab=99.92 E-value=8.7e-25 Score=164.39 Aligned_cols=156 Identities=11% Similarity=0.134 Sum_probs=128.3
Q ss_pred cccCCCHHHHHHHHcCCcHHHHHHHHHhcccccccCCCCchhHHHHhhhhhhhhHHHHHHHHHhhccccccccccCCCcH
Q 041785 21 KQSQMDPNLFKAAADGSVEPFKDMAREVIESSLTVHTKNTILHINIICQETENASTKFVEEILEICPALLLQVNAKGDTP 100 (181)
Q Consensus 21 ~~~~~~t~l~~a~~~g~~~~~~~ll~~~~~~~~~~~~g~t~Lh~a~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~g~t~ 100 (181)
....|.||||+|+..|+.+++++|++.|++++.++..|.||||+| +..++.+++++|++... .+.+++..+..|.||
T Consensus 162 ~d~~g~TpL~~A~~~g~~~iv~~Ll~~ga~~~~~~~~g~t~L~~A--~~~g~~~~v~~Ll~~~~-~~~~~~~~d~~g~t~ 238 (373)
T 2fo1_E 162 MDCDENTPLMLAVLARRRRLVAYLMKAGADPTIYNKSERSALHQA--AANRDFGMMVYMLNSTK-LKGDIEELDRNGMTA 238 (373)
T ss_dssp CCTTSCCHHHHHHHHTCHHHHHHHHHTTCCSCCCCTTCCCHHHHH--HHTTCHHHHHHHTTSHH-HHHTTSCCCTTSCCH
T ss_pred CCCCCCCHHHHHHHcChHHHHHHHHHCCCCCcccCCCCCCHHHHH--HHCCCHHHHHHHHhcCc-cccChhhcCCCCCCH
Confidence 355789999999999999999999999999988899999999999 99999999999988511 026888899999999
Q ss_pred HHHHHHcC---CHHHHHHHHHhhhhccCC--------CCCCcchHHHH----------------HHHhhcccCCCchHHH
Q 041785 101 LHLAAKYS---HFDIVRVLIERAQLAQHG--------DEEPESGIEAF----------------RQMIRMVNNEKNTALH 153 (181)
Q Consensus 101 L~~a~~~~---~~~~~~~L~~~~~~~~~~--------~~~~~~~~~~~----------------~~~~~~~~~~g~t~l~ 153 (181)
||+|+..+ +.+++++|++.|+++... +..+....... +.+++.+|..|+||||
T Consensus 239 L~~A~~~~~~~~~~~v~~Ll~~g~~~~~~~~~~~~~~d~~g~t~Lh~A~~~g~~~~v~~Ll~~~~~~~n~~d~~g~TpL~ 318 (373)
T 2fo1_E 239 LMIVAHNEGRDQVASAKLLVEKGAKVDYDGAARKDSEKYKGRTALHYAAQVSNMPIVKYLVGEKGSNKDKQDEDGKTPIM 318 (373)
T ss_dssp HHHHHHSCSTTHHHHHHHHHHHTCCSSCCSGGGTSSSSCCCCCTHHHHHSSCCHHHHHHHHHHSCCCTTCCCTTCCCHHH
T ss_pred HHHHHHhCCcchHHHHHHHHHCCCCcccccccccCcccccCCCHHHHHHHhCCHHHHHHHHHhcCCCccCcCCCCCCHHH
Confidence 99999888 788999999998877431 11222222211 1456678899999999
Q ss_pred HHHHcCCHHHHHHHHHcCCCCCCCcC
Q 041785 154 EAVSHGNVEVVKILTREDPDYPYSAN 179 (181)
Q Consensus 154 ~A~~~~~~~~~~~Ll~~g~~~~~~~~ 179 (181)
+|+..|+.+++++|+++|++++..+.
T Consensus 319 ~A~~~g~~~iv~~Ll~~gad~~~~d~ 344 (373)
T 2fo1_E 319 LAAQEGRIEVVMYLIQQGASVEAVDA 344 (373)
T ss_dssp HHHHHTCHHHHHHHHHTTCCSSCCCS
T ss_pred HHHHcCCHHHHHHHHHcCCCccCCCC
Confidence 99999999999999999999988765
No 84
>4hbd_A KN motif and ankyrin repeat domain-containing Pro; structural genomics consortium, SGC, protein binding; 1.72A {Homo sapiens}
Probab=99.92 E-value=3.8e-25 Score=160.07 Aligned_cols=128 Identities=16% Similarity=0.144 Sum_probs=119.0
Q ss_pred hcccCCCHHHHHHH-----HcCCcHHHHHHHHHhcccccccCCCCchhHHHHhhhhhhhhHHHHHHHHHhhccccccccc
Q 041785 20 IKQSQMDPNLFKAA-----ADGSVEPFKDMAREVIESSLTVHTKNTILHINIICQETENASTKFVEEILEICPALLLQVN 94 (181)
Q Consensus 20 ~~~~~~~t~l~~a~-----~~g~~~~~~~ll~~~~~~~~~~~~g~t~Lh~a~~~~~~~~~~~~~l~~~~~~~~~~~~~~~ 94 (181)
.....|.||||+|+ ..++.++++.|++.|......+..|.||||+| +..++.+++++|++. |++++.+|
T Consensus 140 ~~~~~g~tpL~~a~~~~~~~~~~~~~v~~Ll~~g~~~~~~~~~g~tpLh~A--~~~g~~~~v~~Ll~~----gad~n~~d 213 (276)
T 4hbd_A 140 KQNRAGYSPIMLTALATLKTQDDIETVLQLFRLGNINAKASQAGQTALMLA--VSHGRVDVVKALLAC----EADVNVQD 213 (276)
T ss_dssp CCCTTSCCHHHHGGGCCCCSHHHHHHHHHHHHHSCTTCCCTTTCCCHHHHH--HHTTCHHHHHHHHHT----TCCTTCCC
T ss_pred CCCCCCCCHHHHHHHHHhhhhhhHHHHHHHHHcCCCccccCCCCCCHHHHH--HHcCCHHHHHHHHhC----CCCCCCCC
Confidence 34567899999999 66899999999999988777888999999999 999999999999997 99999999
Q ss_pred cCCCcHHHHHHHcCCHHHHHHHHH-hhhhccCCCCCCcchHHHHHHHhhcccCCCchHHHHHHHcCCHHHHHHHHHcC
Q 041785 95 AKGDTPLHLAAKYSHFDIVRVLIE-RAQLAQHGDEEPESGIEAFRQMIRMVNNEKNTALHEAVSHGNVEVVKILTRED 171 (181)
Q Consensus 95 ~~g~t~L~~a~~~~~~~~~~~L~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~t~l~~A~~~~~~~~~~~Ll~~g 171 (181)
..|+||||+|+..|+.+++++|++ .|+++ +.+|..|+||||+|+..|+.+++++|++++
T Consensus 214 ~~G~TpLh~A~~~g~~~iv~~Ll~~~gad~------------------~~~d~~g~TpL~~A~~~g~~~iv~~Ll~~~ 273 (276)
T 4hbd_A 214 DDGSTALMCACEHGHKEIAGLLLAVPSCDI------------------SLTDRDGSTALMVALDAGQSEIASMLYSRM 273 (276)
T ss_dssp TTSCCHHHHHHHHTCHHHHHHHHTSTTCCT------------------TCCCTTSCCHHHHHHHHTCHHHHHHHHHHC
T ss_pred CCCCCHHHHHHHCCCHHHHHHHHhcCCCCC------------------cCcCCCCCCHHHHHHHcCCHHHHHHHHhcc
Confidence 999999999999999999999999 78887 889999999999999999999999999875
No 85
>3ui2_A Signal recognition particle 43 kDa protein, chlor; ankyrin repeat, chromodomain, aromatic CAGE, signal recognit particle, protein targeting; 3.18A {Arabidopsis thaliana} PDB: 1x3q_A 2hug_A
Probab=99.92 E-value=1.6e-25 Score=159.37 Aligned_cols=142 Identities=18% Similarity=0.203 Sum_probs=115.7
Q ss_pred cCCCHHHHHHHHcCCcHHHHHHHHHhcccccccCCCCchhHHHHhhhhhhhhHHHHHHHHHhhccccccccc-cCCCcHH
Q 041785 23 SQMDPNLFKAAADGSVEPFKDMAREVIESSLTVHTKNTILHINIICQETENASTKFVEEILEICPALLLQVN-AKGDTPL 101 (181)
Q Consensus 23 ~~~~t~l~~a~~~g~~~~~~~ll~~~~~~~~~~~~g~t~Lh~a~~~~~~~~~~~~~l~~~~~~~~~~~~~~~-~~g~t~L 101 (181)
..|.||||.|+..|+.++++.|++ +.+++.++..|.||||+| +..++.+++++|++. +++++.++ ..|+|||
T Consensus 43 ~~g~t~L~~A~~~g~~~~v~~Ll~-~~~~~~~d~~g~t~L~~A--~~~g~~~~v~~Ll~~----ga~~~~~~~~~g~t~L 115 (244)
T 3ui2_A 43 SEYETPWWTAARKADEQALSQLLE-DRDVDAVDENGRTALLFV--AGLGSDKCVRLLAEA----GADLDHRDMRGGLTAL 115 (244)
T ss_dssp HHHHHHHHHHHTTTCHHHHHHTTT-TCCTTCBCTTSCBHHHHH--HHHTCHHHHHHHHHT----TCCTTCCCSSSCCCHH
T ss_pred cCCCCHHHHHHHcCCHHHHHHHHc-CCCCCCcCCCCCCHHHHH--HHCCCHHHHHHHHHc----CCCCCcCCCCCCCCHH
Confidence 467899999999999999999999 988888999999999999 999999999999997 99999998 8899999
Q ss_pred HHHHHcCCHHHHHHHHHhhhhccCCCCCCcchHHHHHHHhhcccCCCchHHHHHHHcCCHHHHHHHHHcCCC
Q 041785 102 HLAAKYSHFDIVRVLIERAQLAQHGDEEPESGIEAFRQMIRMVNNEKNTALHEAVSHGNVEVVKILTREDPD 173 (181)
Q Consensus 102 ~~a~~~~~~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~t~l~~A~~~~~~~~~~~Ll~~g~~ 173 (181)
|+|+..|+.+++++|++.|+++...+..+......... ......+.|||++|+..|+.+++++|++++.+
T Consensus 116 ~~A~~~g~~~~v~~Ll~~ga~~~~~d~~g~t~l~~A~~--~~~~~~~~~~l~~a~~~g~~~iv~~L~~~~~~ 185 (244)
T 3ui2_A 116 HMAAGYVRPEVVEALVELGADIEVEDERGLTALELARE--ILKTTPKGNPMQFGRRIGLEKVINVLEGQVFE 185 (244)
T ss_dssp HHHHHTTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHH--HHTTCCCSSHHHHHHHHHHHHHHHHHHHHHEE
T ss_pred HHHHHcCCHHHHHHHHHCCCCCCCCCCCCCcHHHHHHH--HHhccCCCCHHHHHHHcChHHHHHHHHHhccc
Confidence 99999999999999999999984444433333332222 11223455555555678899999999986443
No 86
>2fo1_E LIN-12 protein; beta-barrel, protein-DNA complex, double helix, ankyrin repeat, gene regulation/signalling protein/DNA complex; 3.12A {Caenorhabditis elegans} SCOP: d.211.1.1
Probab=99.92 E-value=1.7e-24 Score=162.84 Aligned_cols=130 Identities=20% Similarity=0.214 Sum_probs=111.3
Q ss_pred ccCCCHHHHHHHHcC---CcHHHHHHHHHhccccc--------ccCCCCchhHHHHhhhhhhhhHHHHHHHHHhhccccc
Q 041785 22 QSQMDPNLFKAAADG---SVEPFKDMAREVIESSL--------TVHTKNTILHINIICQETENASTKFVEEILEICPALL 90 (181)
Q Consensus 22 ~~~~~t~l~~a~~~g---~~~~~~~ll~~~~~~~~--------~~~~g~t~Lh~a~~~~~~~~~~~~~l~~~~~~~~~~~ 90 (181)
...|.||||+|+..+ +.++++.|++.|++++. .+..|.||||+| +..++.+++++|++. .+.++
T Consensus 232 d~~g~t~L~~A~~~~~~~~~~~v~~Ll~~g~~~~~~~~~~~~~~d~~g~t~Lh~A--~~~g~~~~v~~Ll~~---~~~~~ 306 (373)
T 2fo1_E 232 DRNGMTALMIVAHNEGRDQVASAKLLVEKGAKVDYDGAARKDSEKYKGRTALHYA--AQVSNMPIVKYLVGE---KGSNK 306 (373)
T ss_dssp CTTSCCHHHHHHHSCSTTHHHHHHHHHHHTCCSSCCSGGGTSSSSCCCCCTHHHH--HSSCCHHHHHHHHHH---SCCCT
T ss_pred CCCCCCHHHHHHHhCCcchHHHHHHHHHCCCCcccccccccCcccccCCCHHHHH--HHhCCHHHHHHHHHh---cCCCc
Confidence 456788899988887 78888888888877654 456789999999 888899999988876 34888
Q ss_pred cccccCCCcHHHHHHHcCCHHHHHHHHHhhhhccCCCCCCcchHHHHHHHhhcccCCCchHHHHHHHcCCHHHHHHHHHc
Q 041785 91 LQVNAKGDTPLHLAAKYSHFDIVRVLIERAQLAQHGDEEPESGIEAFRQMIRMVNNEKNTALHEAVSHGNVEVVKILTRE 170 (181)
Q Consensus 91 ~~~~~~g~t~L~~a~~~~~~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~t~l~~A~~~~~~~~~~~Ll~~ 170 (181)
+.+|..|.||||+|+..|+.+++++|++.|+++ +.+|..|.|||++|+..|+.+++++|+++
T Consensus 307 n~~d~~g~TpL~~A~~~g~~~iv~~Ll~~gad~------------------~~~d~~g~t~l~~A~~~g~~~iv~~Ll~~ 368 (373)
T 2fo1_E 307 DKQDEDGKTPIMLAAQEGRIEVVMYLIQQGASV------------------EAVDATDHTARQLAQANNHHNIVDIFDRC 368 (373)
T ss_dssp TCCCTTCCCHHHHHHHHTCHHHHHHHHHTTCCS------------------SCCCSSSCCHHHHHHHTTCHHHHHHHHTT
T ss_pred cCcCCCCCCHHHHHHHcCCHHHHHHHHHcCCCc------------------cCCCCCCCCHHHHHHHcCCHHHHHHHHhc
Confidence 888999999999999999999999999998887 88999999999999999999999999999
Q ss_pred CCCC
Q 041785 171 DPDY 174 (181)
Q Consensus 171 g~~~ 174 (181)
|++-
T Consensus 369 ~a~~ 372 (373)
T 2fo1_E 369 RPER 372 (373)
T ss_dssp C---
T ss_pred Cccc
Confidence 9863
No 87
>3eu9_A Huntingtin-interacting protein 14; epigenetics, ankyrin repeats, methyllyine binding, huntingti interacting protein 14, acyltransferase, ANK repeat; HET: HIS; 1.99A {Homo sapiens}
Probab=99.92 E-value=2.8e-24 Score=151.59 Aligned_cols=133 Identities=19% Similarity=0.249 Sum_probs=116.9
Q ss_pred cCCCHHHHHHHHcCCcHHHHHHHHHhcccccccCCCCchhHHHHhhhhhhhhHHHHHHHHHhhccccccccc-cCCCcHH
Q 041785 23 SQMDPNLFKAAADGSVEPFKDMAREVIESSLTVHTKNTILHINIICQETENASTKFVEEILEICPALLLQVN-AKGDTPL 101 (181)
Q Consensus 23 ~~~~t~l~~a~~~g~~~~~~~ll~~~~~~~~~~~~g~t~Lh~a~~~~~~~~~~~~~l~~~~~~~~~~~~~~~-~~g~t~L 101 (181)
..+.++|+.|+..|+.+++++|++.|.+++..+..|.||||+| +..++.+++++|++. +.+++... ..|.|||
T Consensus 7 ~~~~~~l~~A~~~g~~~~~~~Ll~~g~~~~~~~~~g~t~L~~A--~~~~~~~~v~~Ll~~----~~~~~~~~~~~~~t~L 80 (240)
T 3eu9_A 7 DYSTWDIVKATQYGIYERCRELVEAGYDVRQPDKENVTLLHWA--AINNRIDLVKYYISK----GAIVDQLGGDLNSTPL 80 (240)
T ss_dssp CGGGCCHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHH--HHTTCHHHHHHHHHT----TCCTTCCBTTTTBCHH
T ss_pred cccchHHHHHHHcCChHHHHHHHHcCCCcCCCCCCCCCHHHHH--HHhCCHHHHHHHHHc----CCcchhhcCCcCCChh
Confidence 3567899999999999999999999999888899999999999 999999999999997 76666544 4599999
Q ss_pred HHHHHcCCHHHHHHHHHhhhhccCCCCCCcchHHHHHHHhhcccCCCchHHHHHHHcCCHHHHHHHHHcCCCCCCCcC
Q 041785 102 HLAAKYSHFDIVRVLIERAQLAQHGDEEPESGIEAFRQMIRMVNNEKNTALHEAVSHGNVEVVKILTREDPDYPYSAN 179 (181)
Q Consensus 102 ~~a~~~~~~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~t~l~~A~~~~~~~~~~~Ll~~g~~~~~~~~ 179 (181)
|+|+..++.+++++|++.|+++ +.++..|.||||+|+..|+.+++++|+++|++++..+.
T Consensus 81 ~~A~~~~~~~~v~~Ll~~g~~~------------------~~~~~~g~t~l~~A~~~~~~~~~~~Ll~~~~~~~~~~~ 140 (240)
T 3eu9_A 81 HWATRQGHLSMVVQLMKYGADP------------------SLIDGEGCSCIHLAAQFGHTSIVAYLIAKGQDVDMMDQ 140 (240)
T ss_dssp HHHHHHTCHHHHHHHHHTTCCT------------------TCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCT
T ss_pred HHHHHcCCHHHHHHHHHcCCCC------------------cccCCCCCCHHHHHHHcCHHHHHHHHHhcCCCccccCC
Confidence 9999999999999999999887 67778888888888888888888888888888776543
No 88
>1n0q_A 3ANK, 3 ankyrin repeats; structural protein; 1.26A {} SCOP: k.37.1.1
Probab=99.92 E-value=2.2e-24 Score=131.42 Aligned_cols=93 Identities=30% Similarity=0.430 Sum_probs=82.2
Q ss_pred CCCchhHHHHhhhhhhhhHHHHHHHHHhhccccccccccCCCcHHHHHHHcCCHHHHHHHHHhhhhccCCCCCCcchHHH
Q 041785 57 TKNTILHINIICQETENASTKFVEEILEICPALLLQVNAKGDTPLHLAAKYSHFDIVRVLIERAQLAQHGDEEPESGIEA 136 (181)
Q Consensus 57 ~g~t~Lh~a~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~g~t~L~~a~~~~~~~~~~~L~~~~~~~~~~~~~~~~~~~~ 136 (181)
+|.||||+| +..++.+++++|++. +.+++.++..|+||||+|+..++.+++++|++.|+++
T Consensus 1 ~g~t~L~~A--~~~~~~~~v~~Ll~~----g~~~n~~d~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~------------- 61 (93)
T 1n0q_A 1 NGRTPLHLA--ARNGHLEVVKLLLEA----GADVNAKDKNGRTPLHLAARNGHLEVVKLLLEAGADV------------- 61 (93)
T ss_dssp --CCHHHHH--HHHTCHHHHHHHHHT----TCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCT-------------
T ss_pred CCCcHHHHH--HHcCCHHHHHHHHHc----CCCCcccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCC-------------
Confidence 478999999 889999999998886 8888999999999999999999999999999998887
Q ss_pred HHHHhhcccCCCchHHHHHHHcCCHHHHHHHHHcCCC
Q 041785 137 FRQMIRMVNNEKNTALHEAVSHGNVEVVKILTREDPD 173 (181)
Q Consensus 137 ~~~~~~~~~~~g~t~l~~A~~~~~~~~~~~Ll~~g~~ 173 (181)
+.+|..|+||||+|+..|+.+++++|+++|++
T Consensus 62 -----~~~d~~g~t~l~~A~~~~~~~~~~~Ll~~ga~ 93 (93)
T 1n0q_A 62 -----NAKDKNGRTPLHLAARNGHLEVVKLLLEAGAY 93 (93)
T ss_dssp -----TCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCC
T ss_pred -----CccCCCCCCHHHHHHHcCCHHHHHHHHHcCCC
Confidence 78888999999999999999999999999875
No 89
>2b0o_E UPLC1; arfgap, structural genomics, structural genomics consortium, SGC, metal binding protein; 2.06A {Homo sapiens}
Probab=99.92 E-value=1.4e-24 Score=158.92 Aligned_cols=126 Identities=20% Similarity=0.234 Sum_probs=117.6
Q ss_pred CCHHHHHHHHcCCcHHHHHHHHHhccccc------ccCCCCchhHHHHhhhh---hhhhHHHHHHHHHhhcccccccccc
Q 041785 25 MDPNLFKAAADGSVEPFKDMAREVIESSL------TVHTKNTILHINIICQE---TENASTKFVEEILEICPALLLQVNA 95 (181)
Q Consensus 25 ~~t~l~~a~~~g~~~~~~~ll~~~~~~~~------~~~~g~t~Lh~a~~~~~---~~~~~~~~l~~~~~~~~~~~~~~~~ 95 (181)
..++|+.|+..|+.+.++.|+..|.+++. .+..|.||||+| +.. ++.+++++|++. +++++.+|.
T Consensus 151 ~~~~L~~A~~~g~~~~v~~ll~~g~d~~~~~~~~~~~~~g~t~Lh~A--~~~~~~~~~~iv~~Ll~~----gadvn~~d~ 224 (301)
T 2b0o_E 151 EPQRLWTAICNRDLLSVLEAFANGQDFGQPLPGPDAQAPEELVLHLA--VKVANQASLPLVDFIIQN----GGHLDAKAA 224 (301)
T ss_dssp CHHHHHHHHHTTCHHHHHHHHHTTCCTTSCEECSSSCSCEECHHHHH--HHTCCTTTHHHHHHHHHH----SSCTTCCCT
T ss_pred hHHHHhhhhhccCHHHHHHHHhcCCcccccCCCcccCCCCccHHHHH--HHhcccCcHHHHHHHHhc----CCCCCCCCC
Confidence 34679999999999999999999988875 588999999999 876 889999999998 999999999
Q ss_pred CCCcHHHHHHHcCCHHHHHHHHHhhhhccCCCCCCcchHHHHHHHhhcccCCCchHHHHHHHcCCHHHHHHHHHcCCCC
Q 041785 96 KGDTPLHLAAKYSHFDIVRVLIERAQLAQHGDEEPESGIEAFRQMIRMVNNEKNTALHEAVSHGNVEVVKILTREDPDY 174 (181)
Q Consensus 96 ~g~t~L~~a~~~~~~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~t~l~~A~~~~~~~~~~~Ll~~g~~~ 174 (181)
.|+||||+|+..|+.+++++|++.|+++ +.+|..|.|||++|+..++.+++++|+++|++.
T Consensus 225 ~G~TpLh~A~~~g~~~~v~~Ll~~gad~------------------~~~d~~G~TpL~~A~~~~~~~iv~~Ll~~ga~~ 285 (301)
T 2b0o_E 225 DGNTALHYAALYNQPDCLKLLLKGRALV------------------GTVNEAGETALDIARKKHHKECEELLEQAQAGT 285 (301)
T ss_dssp TCCCHHHHHHHTTCHHHHHHHHHTTCCC------------------SCCCTTSCCHHHHHHHHTCHHHHHHHHHHHHHT
T ss_pred CCCCHHHHHHHcCCHHHHHHHHHcCCCC------------------CCcCCCCCCHHHHHHHcCCHHHHHHHHHhcCCC
Confidence 9999999999999999999999999998 899999999999999999999999999988764
No 90
>3t8k_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center F or structural genomics, MCSG; 1.77A {Leptotrichia buccalis}
Probab=99.91 E-value=4.3e-25 Score=151.05 Aligned_cols=129 Identities=12% Similarity=0.082 Sum_probs=113.5
Q ss_pred CCHHHHHHHHcCCcHHHHHHHHHhccccccc-CCCCchhHHHHhhhhhhh----hHHHHHHHHHhhccccccccccCCCc
Q 041785 25 MDPNLFKAAADGSVEPFKDMAREVIESSLTV-HTKNTILHINIICQETEN----ASTKFVEEILEICPALLLQVNAKGDT 99 (181)
Q Consensus 25 ~~t~l~~a~~~g~~~~~~~ll~~~~~~~~~~-~~g~t~Lh~a~~~~~~~~----~~~~~l~~~~~~~~~~~~~~~~~g~t 99 (181)
+.++|+.|++.|+.+.++.++..+.+. .+ ..|.||||+| +..++. +++++|++. |++++.++..|+|
T Consensus 6 ~~~~l~~Aa~~g~~~~~~~l~~~~~~~--~~~~~g~T~Lh~A--~~~~~~~~~~~iv~~Ll~~----Gadvn~~d~~g~T 77 (186)
T 3t8k_A 6 EYRTVSAAAMLGTYEDFLELFEKGYED--KESVLKSNILYDV--LRNNNDEARYKISMFLINK----GADIKSRTKEGTT 77 (186)
T ss_dssp HCSSHHHHHHHSCHHHHHHHHHHSSSC--HHHHHTTTHHHHH--TTCSCHHHHHHHHHHHHHT----TCCSSCCCTTCCC
T ss_pred cccHHHHHHHcCCHHHHHHHHhcCccc--ccccCCCCHHHHH--HHcCCcchHHHHHHHHHHC----CCCCCCCCCCCCc
Confidence 457899999999999999999877654 44 7799999999 887764 588888886 9999999999999
Q ss_pred HHHHHHHcCC------HHHHHHHHHhhhhccCCCCCCcchHHHHHHHhhcccCCCc-hHHHHHHHcC-----CHHHHHHH
Q 041785 100 PLHLAAKYSH------FDIVRVLIERAQLAQHGDEEPESGIEAFRQMIRMVNNEKN-TALHEAVSHG-----NVEVVKIL 167 (181)
Q Consensus 100 ~L~~a~~~~~------~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~-t~l~~A~~~~-----~~~~~~~L 167 (181)
|||+|+..++ .+++++|++.|+++ +.+|..|+ ||||+|+..+ ..+++++|
T Consensus 78 pLh~a~~~~~~~~~~~~~iv~~Ll~~Gadi------------------n~~d~~g~ttpLh~A~~~~~~~~~~~~iv~~L 139 (186)
T 3t8k_A 78 LFFPLFQGGGNDITGTTELCKIFLEKGADI------------------TALYKPYKIVVFKNIFNYFVDENEMIPLYKLI 139 (186)
T ss_dssp THHHHHHHCTTCHHHHHHHHHHHHHTTCCS------------------SSCBGGGTBCTTGGGGGCCSCHHHHHHHHHHH
T ss_pred HHHHHHHcCCcchhhHHHHHHHHHHCCCCC------------------CccCCCcCchHHHHHHHcCCChhhHHHHHHHH
Confidence 9999999987 57899999999998 99999999 9999999954 35699999
Q ss_pred HH-cCCCCCCCcC
Q 041785 168 TR-EDPDYPYSAN 179 (181)
Q Consensus 168 l~-~g~~~~~~~~ 179 (181)
++ +|++++.+++
T Consensus 140 l~~~gad~~~~d~ 152 (186)
T 3t8k_A 140 FSQSGLQLLIKDK 152 (186)
T ss_dssp HTSTTCCTTCCCT
T ss_pred HHhcCCCCcccCC
Confidence 99 9999998875
No 91
>3jue_A Arfgap with coiled-coil, ANK repeat and PH domain containing protein 1; arfgap domain, zinc-binding module, GTPase activ metal-binding, nitration; 2.30A {Homo sapiens} PDB: 3t9k_A 4f1p_A
Probab=99.91 E-value=5.2e-24 Score=159.50 Aligned_cols=125 Identities=18% Similarity=0.210 Sum_probs=117.3
Q ss_pred CCHHHHHHHHc-CCcHHHHHHHHHhccccccc--CCCCchhHHHHhhhhhhhhHHHHHHHHHhhccccccccccCCCcHH
Q 041785 25 MDPNLFKAAAD-GSVEPFKDMAREVIESSLTV--HTKNTILHINIICQETENASTKFVEEILEICPALLLQVNAKGDTPL 101 (181)
Q Consensus 25 ~~t~l~~a~~~-g~~~~~~~ll~~~~~~~~~~--~~g~t~Lh~a~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~g~t~L 101 (181)
+.++||.|+.. |+.++++.|++.|++++..+ ..|.||||+| +..++.+++++|++. +++++.+|..|+|||
T Consensus 199 ~~t~L~~Aa~~~g~~~~v~~LL~~Gadvn~~~~~~~g~TpLh~A--a~~g~~~iv~~LL~~----Gadvn~~d~~G~TpL 272 (368)
T 3jue_A 199 PGALLFRASGHPPSLPTMADALAHGADVNWVNGGQDNATPLIQA--TAANSLLACEFLLQN----GANVNQADSAGRGPL 272 (368)
T ss_dssp HHHHHHHHTSSSCCHHHHHHHHHTTCCTTCCCTTTTCCCHHHHH--HHTTCHHHHHHHHHT----TCCTTCCCTTSCCHH
T ss_pred CCcHHHHHHHccCCHHHHHHHHHcCCCCCccccccCCCCHHHHH--HHCCCHHHHHHHHHc----CCCCCCCCCCCCCHH
Confidence 45799999999 99999999999999998777 8899999999 999999999999997 999999999999999
Q ss_pred HHHHHcCCHHHHHHHHHhhhhccCCCCCCcchHHHHHHHhhcccCCCchHHHHHHHcCCHHHHHHHHHcCCC
Q 041785 102 HLAAKYSHFDIVRVLIERAQLAQHGDEEPESGIEAFRQMIRMVNNEKNTALHEAVSHGNVEVVKILTREDPD 173 (181)
Q Consensus 102 ~~a~~~~~~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~t~l~~A~~~~~~~~~~~Ll~~g~~ 173 (181)
|+|+..++.+++++|++.|+++ +.+|..|.||||+|+..++.+++++|+..+..
T Consensus 273 h~A~~~g~~~~v~~LL~~Gad~------------------~~~d~~G~TpL~~A~~~g~~~iv~lLl~~~~~ 326 (368)
T 3jue_A 273 HHATILGHTGLACLFLKRGADL------------------GARDSEGRDPLTIAMETANADIVTLLRLAKMR 326 (368)
T ss_dssp HHHHHHTCHHHHHHHHHTTCCT------------------TCCCTTSCCHHHHHHHTTCHHHHHHHHHHHC-
T ss_pred HHHHHcCcHHHHHHHHHCcCCC------------------CCcCCCCCCHHHHHHHCCCHHHHHHHHHcCCC
Confidence 9999999999999999999998 89999999999999999999999999987643
No 92
>4g8k_A 2-5A-dependent ribonuclease; ankyrin-repeat domain, single-stranded RNA, hydrolase; 2.40A {Homo sapiens} PDB: 4g8l_A*
Probab=99.91 E-value=8.9e-24 Score=156.63 Aligned_cols=133 Identities=17% Similarity=0.168 Sum_probs=123.8
Q ss_pred ccCCCHHHHHHHHcCCcHHHHHHHHHhcccccccC-CCCchhHHHHhhhhhhhhHHHHHHHHHhhccccccccccCCCcH
Q 041785 22 QSQMDPNLFKAAADGSVEPFKDMAREVIESSLTVH-TKNTILHINIICQETENASTKFVEEILEICPALLLQVNAKGDTP 100 (181)
Q Consensus 22 ~~~~~t~l~~a~~~g~~~~~~~ll~~~~~~~~~~~-~g~t~Lh~a~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~g~t~ 100 (181)
..++.|+||.|++.|++++|+.|++.|++++.++. .|.||||+| +..|+.+++++|++. |++++.++..+.++
T Consensus 22 ~~~~~t~L~~Av~~g~~~~V~~LL~~Gadvn~~~~~~g~TpLh~A--~~~g~~~iv~~Ll~~----ga~~~~~~~~~~~~ 95 (337)
T 4g8k_A 22 AVEDNHLLIKAVQNEDVDLVQQLLEGGANVNFQEEEGGWTPLHNA--VQMSREDIVELLLRH----GADPVLRKKNGATP 95 (337)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHTCCTTCCCTTTCCCHHHHH--HHTTCHHHHHHHHHT----TCCTTCCCTTCCCH
T ss_pred CCCCChHHHHHHHcCCHHHHHHHHHCCCCCCccCCCCCcCHHHHH--HHcCCHHHHHHHHHc----CCchhhhccCCCch
Confidence 34578999999999999999999999999987654 599999999 999999999999997 99999999999999
Q ss_pred HHHHHHcCCHHHHHHHHHhhhhccCCCCCCcchHHHHHHHhhcccCCCchHHHHHHHcCCHHHHHHHHHcCCCCCCCc
Q 041785 101 LHLAAKYSHFDIVRVLIERAQLAQHGDEEPESGIEAFRQMIRMVNNEKNTALHEAVSHGNVEVVKILTREDPDYPYSA 178 (181)
Q Consensus 101 L~~a~~~~~~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~t~l~~A~~~~~~~~~~~Ll~~g~~~~~~~ 178 (181)
++.++..+...++..++..+.++ +.+|..|.||+|+|+..|+.+++++|+++|++++...
T Consensus 96 ~~~~~~~~~~~~~~~~~~~~~~~------------------~~~d~~g~t~l~~A~~~~~~~~~~~ll~~ga~~~~~~ 155 (337)
T 4g8k_A 96 FILAAIAGSVKLLKLFLSKGADV------------------NECDFYGFTAFMEAAVYGKVKALKFLYKRGANVNLRR 155 (337)
T ss_dssp HHHHHHHTCHHHHHHHHTTTCCT------------------TCBCTTCCBHHHHHHHTTCHHHHHHHHHTTCCTTCCC
T ss_pred hHHHHhcccchhhHHhhhccchh------------------hhhccCCCCHHHHHHHcCcHHHHHHHHHcCCCcchhh
Confidence 99999999999999999999887 8899999999999999999999999999999987654
No 93
>3c5r_A BARD-1, BRCA1-associated ring domain protein 1; ankyrin repeat, helix, extended loop, four repeat, PR ANK repeat, disease mutation, metal-binding; 2.00A {Homo sapiens} SCOP: k.37.1.1
Probab=99.91 E-value=1.3e-23 Score=136.73 Aligned_cols=107 Identities=24% Similarity=0.356 Sum_probs=98.2
Q ss_pred hcccccccCCCCchhHHHHhhhhhhhhHHHHHHHHHhhccccccccccCCCcHHHHHHHcCCHHHHHHHHHhhhhccCCC
Q 041785 48 VIESSLTVHTKNTILHINIICQETENASTKFVEEILEICPALLLQVNAKGDTPLHLAAKYSHFDIVRVLIERAQLAQHGD 127 (181)
Q Consensus 48 ~~~~~~~~~~g~t~Lh~a~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~g~t~L~~a~~~~~~~~~~~L~~~~~~~~~~~ 127 (181)
|+++ .++..|.||||+| +..++.+++++|++. +.+++.++..|.||||+|+..++.+++++|++.|+++
T Consensus 1 G~d~-~~~~~g~t~L~~A--~~~~~~~~~~~Ll~~----g~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~---- 69 (137)
T 3c5r_A 1 GIDP-FTNHRGETLLHIA--SIKGDIPSVEYLLQN----GSDPNVKDHAGWTPLHEACNHGHLKVVELLLQHKALV---- 69 (137)
T ss_dssp ---C-CCCTTCCCHHHHH--HHHTCHHHHHHHHHT----TCCSCCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCT----
T ss_pred CCCC-CcCCCCCCHHHHH--HHcCCHHHHHHHHHc----CCCCCcCCCCCCCHHHHHHHcCCHHHHHHHHHcCCcc----
Confidence 3455 5789999999999 999999999999986 8999999999999999999999999999999999887
Q ss_pred CCCcchHHHHHHHhhcccCCCchHHHHHHHcCCHHHHHHHHHcCCCCCCCcC
Q 041785 128 EEPESGIEAFRQMIRMVNNEKNTALHEAVSHGNVEVVKILTREDPDYPYSAN 179 (181)
Q Consensus 128 ~~~~~~~~~~~~~~~~~~~~g~t~l~~A~~~~~~~~~~~Ll~~g~~~~~~~~ 179 (181)
+.+|..|+||||+|+..|+.+++++|+++|++++..+.
T Consensus 70 --------------~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~~~ 107 (137)
T 3c5r_A 70 --------------NTTGYQNDSPLHDAAKNGHVDIVKLLLSYGASRNAVNI 107 (137)
T ss_dssp --------------TCCCGGGCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCT
T ss_pred --------------cCcCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCCCC
Confidence 88999999999999999999999999999999988764
No 94
>1n0q_A 3ANK, 3 ankyrin repeats; structural protein; 1.26A {} SCOP: k.37.1.1
Probab=99.89 E-value=5.3e-23 Score=125.20 Aligned_cols=92 Identities=26% Similarity=0.338 Sum_probs=87.0
Q ss_pred CCCHHHHHHHHcCCcHHHHHHHHHhcccccccCCCCchhHHHHhhhhhhhhHHHHHHHHHhhccccccccccCCCcHHHH
Q 041785 24 QMDPNLFKAAADGSVEPFKDMAREVIESSLTVHTKNTILHINIICQETENASTKFVEEILEICPALLLQVNAKGDTPLHL 103 (181)
Q Consensus 24 ~~~t~l~~a~~~g~~~~~~~ll~~~~~~~~~~~~g~t~Lh~a~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~g~t~L~~ 103 (181)
.|.||||+|+..|+.+++++|++.|++++.++..|.||||+| +..++.+++++|++. +++++.+|..|.||||+
T Consensus 1 ~g~t~L~~A~~~~~~~~v~~Ll~~g~~~n~~d~~g~t~L~~A--~~~~~~~~v~~Ll~~----ga~~~~~d~~g~t~l~~ 74 (93)
T 1n0q_A 1 NGRTPLHLAARNGHLEVVKLLLEAGADVNAKDKNGRTPLHLA--ARNGHLEVVKLLLEA----GADVNAKDKNGRTPLHL 74 (93)
T ss_dssp --CCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHH--HHTTCHHHHHHHHHT----TCCTTCCCTTSCCHHHH
T ss_pred CCCcHHHHHHHcCCHHHHHHHHHcCCCCcccCCCCCCHHHHH--HHcCCHHHHHHHHHc----CCCCCccCCCCCCHHHH
Confidence 378999999999999999999999999999999999999999 999999999999997 99999999999999999
Q ss_pred HHHcCCHHHHHHHHHhhh
Q 041785 104 AAKYSHFDIVRVLIERAQ 121 (181)
Q Consensus 104 a~~~~~~~~~~~L~~~~~ 121 (181)
|+..++.+++++|++.|+
T Consensus 75 A~~~~~~~~~~~Ll~~ga 92 (93)
T 1n0q_A 75 AARNGHLEVVKLLLEAGA 92 (93)
T ss_dssp HHHTTCHHHHHHHHHTTC
T ss_pred HHHcCCHHHHHHHHHcCC
Confidence 999999999999999885
No 95
>1d9s_A Cyclin-dependent kinase 4 inhibitor B; helix-turn-helix, ankyrin repeat, signaling protein; NMR {Mus musculus} SCOP: i.11.1.1
Probab=99.89 E-value=2.7e-23 Score=135.13 Aligned_cols=106 Identities=11% Similarity=0.135 Sum_probs=99.2
Q ss_pred cccccccCCCCchhHHHHhhhhhhhhHHHHHHHHHhhccccccccccCCCcHHHHHHHcCCHHHHHHHHHhhhhccCCCC
Q 041785 49 IESSLTVHTKNTILHINIICQETENASTKFVEEILEICPALLLQVNAKGDTPLHLAAKYSHFDIVRVLIERAQLAQHGDE 128 (181)
Q Consensus 49 ~~~~~~~~~g~t~Lh~a~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~g~t~L~~a~~~~~~~~~~~L~~~~~~~~~~~~ 128 (181)
++.+..+..|.||||+| +..++.+++++|++. +.+++.++..|+||||+|+. ++.+++++|++.|+++
T Consensus 3 ~~~~~~~~~g~t~L~~A--~~~~~~~~v~~Ll~~----g~~~~~~~~~g~t~L~~A~~-~~~~~v~~Ll~~g~~~----- 70 (136)
T 1d9s_A 3 PGIHMLGGSSDAGLATA--AARGQVETVRQLLEA----GADPNALNRFGRRPIQVMMM-GSAQVAELLLLHGAEP----- 70 (136)
T ss_dssp CCCSCCCCCCSCHHHHH--HHTTCHHHHHHHHHT----TCCTTCCCTTCCTTTTTSTT-SCHHHHHHHHHHTCCS-----
T ss_pred CCccCCCCCCccHHHHH--HHcCCHHHHHHHHHc----CCCcCCcCCCCCCHHHHHHc-CCHHHHHHHHHCCCCC-----
Confidence 45567889999999999 999999999999997 89999999999999999999 9999999999999988
Q ss_pred CCcchHHHHHHHhhcccCC-CchHHHHHHHcCCHHHHHHHHHcCCCCCCCcC
Q 041785 129 EPESGIEAFRQMIRMVNNE-KNTALHEAVSHGNVEVVKILTREDPDYPYSAN 179 (181)
Q Consensus 129 ~~~~~~~~~~~~~~~~~~~-g~t~l~~A~~~~~~~~~~~Ll~~g~~~~~~~~ 179 (181)
+.+|.. |+||||+|+..|+.+++++|+++|++++..+.
T Consensus 71 -------------~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~d~ 109 (136)
T 1d9s_A 71 -------------NCADPATLTRPVHDAAREGFLDTLVVLHRAGARLDVCDA 109 (136)
T ss_dssp -------------SCCBTTTTBCHHHHHHHHTCHHHHHHHHHTCCCCCCCSS
T ss_pred -------------CCcCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCccCC
Confidence 888999 99999999999999999999999999988764
No 96
>3aaa_C Myotrophin, protein V-1; actin capping protein, barbed END capping, inhibition, prote binding, actin capping, actin-binding, cytoskeleton, ANK RE; 2.20A {Homo sapiens} PDB: 1myo_A 2kxp_C 2myo_A
Probab=99.89 E-value=1.1e-22 Score=129.91 Aligned_cols=101 Identities=19% Similarity=0.177 Sum_probs=93.5
Q ss_pred cCCCCchhHHHHhhhhhhhhHHHHHHHHHhhccccccccccCCCcHHHHHHHcCCHHHHHHHHHhhhhccCCCCCCcchH
Q 041785 55 VHTKNTILHINIICQETENASTKFVEEILEICPALLLQVNAKGDTPLHLAAKYSHFDIVRVLIERAQLAQHGDEEPESGI 134 (181)
Q Consensus 55 ~~~g~t~Lh~a~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~g~t~L~~a~~~~~~~~~~~L~~~~~~~~~~~~~~~~~~ 134 (181)
+..|.+|||+| +..++.++++.|++. +.+++.++..|+||||+|+..++.+++++|++.|+++
T Consensus 4 ~~~~~~~l~~A--~~~~~~~~v~~ll~~----~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~----------- 66 (123)
T 3aaa_C 4 GSMCDKEFMWA--LKNGDLDEVKDYVAK----GEDVNRTLEGGRKPLHYAADCGQLEILEFLLLKGADI----------- 66 (123)
T ss_dssp ---CHHHHHHH--HHTTCHHHHHHHHHT----TCCTTSCCTTSSCHHHHHHHTTCHHHHHHHHTTTCCT-----------
T ss_pred ccccchHHHHH--HHcCCHHHHHHHHHc----CCCcCccCCCCCcHHHHHHHcCCHHHHHHHHHcCCCC-----------
Confidence 56789999999 999999999999986 8899999999999999999999999999999999888
Q ss_pred HHHHHHhhcccCCCchHHHHHHHcCCHHHHHHHHHcCCCCCCCcC
Q 041785 135 EAFRQMIRMVNNEKNTALHEAVSHGNVEVVKILTREDPDYPYSAN 179 (181)
Q Consensus 135 ~~~~~~~~~~~~~g~t~l~~A~~~~~~~~~~~Ll~~g~~~~~~~~ 179 (181)
+.+|..|+||||+|+..++.+++++|+++|++++..+.
T Consensus 67 -------~~~d~~g~tpL~~A~~~~~~~~v~~Ll~~ga~~~~~~~ 104 (123)
T 3aaa_C 67 -------NAPDKHHITPLLSAVYEGHVSCVKLLLSKGADKTVKGP 104 (123)
T ss_dssp -------TCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCTTCCCT
T ss_pred -------CcCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCcCC
Confidence 88999999999999999999999999999999988765
No 97
>2vge_A RELA-associated inhibitor; iaspp, nucleus, apoptosis, repressor, cytoplasm, phosphorylation, P53 binding protein, ANK repeat, SH3 domain; 2.10A {Homo sapiens}
Probab=99.88 E-value=1.3e-22 Score=142.97 Aligned_cols=115 Identities=17% Similarity=0.070 Sum_probs=97.8
Q ss_pred HHHHHHHhcccc---cccCCCCchhHHHHhhhhhhhhHHHHHHHHHhhccccccccccCCCcHHHHHHHcCCHHHHHHHH
Q 041785 41 FKDMAREVIESS---LTVHTKNTILHINIICQETENASTKFVEEILEICPALLLQVNAKGDTPLHLAAKYSHFDIVRVLI 117 (181)
Q Consensus 41 ~~~ll~~~~~~~---~~~~~g~t~Lh~a~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~g~t~L~~a~~~~~~~~~~~L~ 117 (181)
++.|++.+.+++ ..+..|.||||+| +..|+.++++.|++. +.+++.++..|+||||+|+..|+.+++++|+
T Consensus 1 v~~ll~~~~~~~~~~~~~~~~~t~L~~A--~~~g~~~~v~~Ll~~----g~~~~~~d~~g~tpLh~A~~~g~~~~v~~Ll 74 (229)
T 2vge_A 1 MRSVLRKAGSPRKARRARLNPLVLLLDA--ALTGELEVVQQAVKE----MNDPSQPNEEGITALHNAICGANYSIVDFLI 74 (229)
T ss_dssp ---------CCCCCCCTTSCHHHHHHHH--HHHTCHHHHHHHHHH----SSCTTCCCTTSCCHHHHHHHTTCHHHHHHHH
T ss_pred CeehhccCCCCccccccccchhHHHHHH--HHcCCHHHHHHHHhc----CCCCCCCCCCCCCHHHHHHHcCCHHHHHHHH
Confidence 456788787765 3455677889999 999999999999997 8999999999999999999999999999999
Q ss_pred HhhhhccCCCCCCcchHHHHHHHhhcccCCCchHHHHHHHcCCHHHHHHHHHcCCCCCCCcC
Q 041785 118 ERAQLAQHGDEEPESGIEAFRQMIRMVNNEKNTALHEAVSHGNVEVVKILTREDPDYPYSAN 179 (181)
Q Consensus 118 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~t~l~~A~~~~~~~~~~~Ll~~g~~~~~~~~ 179 (181)
+.|+++ +.+|..|+||||+|+..|+.+++++|+++|++++..++
T Consensus 75 ~~ga~~------------------n~~d~~g~tpLh~A~~~g~~~~v~~Ll~~ga~~~~~~~ 118 (229)
T 2vge_A 75 TAGANV------------------NSPDSHGWTPLHCAASCNDTVICMALVQHGAAIFATTL 118 (229)
T ss_dssp HTTCCT------------------TCCCTTCCCHHHHHHHTTCHHHHHHHHTTTCCTTCCCS
T ss_pred HCCCCC------------------CCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCcccccC
Confidence 999988 88999999999999999999999999999999988754
No 98
>2l6b_A NR1C; ankyrin, consensus, repeat protein, ising model, DE NOV; NMR {Escherichia coli}
Probab=99.88 E-value=2.8e-23 Score=131.21 Aligned_cols=100 Identities=29% Similarity=0.344 Sum_probs=55.7
Q ss_pred ccCCCCchhHHHHhhhhhhhhHHHHHHHHHhhccccccccccCCCcHHHHHHHcCCHHHHHHHHHhhhhccCCCCCCcch
Q 041785 54 TVHTKNTILHINIICQETENASTKFVEEILEICPALLLQVNAKGDTPLHLAAKYSHFDIVRVLIERAQLAQHGDEEPESG 133 (181)
Q Consensus 54 ~~~~g~t~Lh~a~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~g~t~L~~a~~~~~~~~~~~L~~~~~~~~~~~~~~~~~ 133 (181)
+|..|.||||+| +..++.+++++|++. +.+++.++..|.||||+|+..++.+++++|++.|+++
T Consensus 5 ~d~~g~t~L~~A--~~~~~~~~~~~Ll~~----g~~~~~~d~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~---------- 68 (115)
T 2l6b_A 5 GSKDGNTPLHNA--AKNGHAEEVKKLLSK----GADVNARSKDGNTPLHLAAKNGHAEIVKLLLAKGADV---------- 68 (115)
T ss_dssp CSCSSCCHHHHH--HHHTCHHHHHHHTTT----TCCSSCCCSSSCCTTHHHHTTTCHHHHHHHTTTTCCT----------
T ss_pred cCCCCCCHHHHH--HHcCCHHHHHHHHHc----CCCCCCcCCCCCCHHHHHHHcCcHHHHHHHHHcCCCC----------
Confidence 345555555555 555555555555554 5555555555555555555555555555555555554
Q ss_pred HHHHHHHhhcccCCCchHHHHHHHcCCHHHHHHHHHcCCCCCCC
Q 041785 134 IEAFRQMIRMVNNEKNTALHEAVSHGNVEVVKILTREDPDYPYS 177 (181)
Q Consensus 134 ~~~~~~~~~~~~~~g~t~l~~A~~~~~~~~~~~Ll~~g~~~~~~ 177 (181)
+.+|..|+||||+|+..++.+++++|+++|++++..
T Consensus 69 --------~~~d~~g~tpl~~A~~~~~~~~~~~Ll~~ga~~n~~ 104 (115)
T 2l6b_A 69 --------NARSKDGNTPEHLAKKNGHHEIVKLLDAKGADVNAR 104 (115)
T ss_dssp --------TCCCTTCCCTTHHHHTTTCHHHHHHHHTTSSSHHHH
T ss_pred --------cccCCCCCCHHHHHHHCCCHHHHHHHHHcCCCCCcC
Confidence 455555555555555555555555555555555443
No 99
>2l6b_A NR1C; ankyrin, consensus, repeat protein, ising model, DE NOV; NMR {Escherichia coli}
Probab=99.87 E-value=1.4e-22 Score=127.94 Aligned_cols=108 Identities=21% Similarity=0.236 Sum_probs=99.0
Q ss_pred cccCCCHHHHHHHHcCCcHHHHHHHHHhcccccccCCCCchhHHHHhhhhhhhhHHHHHHHHHhhccccccccccCCCcH
Q 041785 21 KQSQMDPNLFKAAADGSVEPFKDMAREVIESSLTVHTKNTILHINIICQETENASTKFVEEILEICPALLLQVNAKGDTP 100 (181)
Q Consensus 21 ~~~~~~t~l~~a~~~g~~~~~~~ll~~~~~~~~~~~~g~t~Lh~a~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~g~t~ 100 (181)
....|.||||+|+..|+.++++.|++.|++++..+..|.||||+| +..++.+++++|++. +++++.++..|.||
T Consensus 5 ~d~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~d~~g~t~L~~A--~~~~~~~~~~~Ll~~----g~~~~~~d~~g~tp 78 (115)
T 2l6b_A 5 GSKDGNTPLHNAAKNGHAEEVKKLLSKGADVNARSKDGNTPLHLA--AKNGHAEIVKLLLAK----GADVNARSKDGNTP 78 (115)
T ss_dssp CSCSSCCHHHHHHHHTCHHHHHHHTTTTCCSSCCCSSSCCTTHHH--HTTTCHHHHHHHTTT----TCCTTCCCTTCCCT
T ss_pred cCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCCHHHHH--HHcCcHHHHHHHHHc----CCCCcccCCCCCCH
Confidence 345789999999999999999999999999988899999999999 999999999999986 99999999999999
Q ss_pred HHHHHHcCCHHHHHHHHHhhhhccCCCCCCcchHHHHHHHhhcccCCCchHH
Q 041785 101 LHLAAKYSHFDIVRVLIERAQLAQHGDEEPESGIEAFRQMIRMVNNEKNTAL 152 (181)
Q Consensus 101 L~~a~~~~~~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~t~l 152 (181)
||+|+..++.+++++|++.|+++ +.++..|.+|-
T Consensus 79 l~~A~~~~~~~~~~~Ll~~ga~~------------------n~~~~~~~~~~ 112 (115)
T 2l6b_A 79 EHLAKKNGHHEIVKLLDAKGADV------------------NARSWGSSHHH 112 (115)
T ss_dssp THHHHTTTCHHHHHHHHTTSSSH------------------HHHSCCCC---
T ss_pred HHHHHHCCCHHHHHHHHHcCCCC------------------CcCCccccccc
Confidence 99999999999999999999998 88888888874
No 100
>2jab_A H10-2-G3; HER2, darpin, ankyrin repeat protein, membrane protein, human epidermal growth factor receptor 2, de novo protein; 1.70A {} PDB: 3hg0_D 2xzt_G 2xzd_G 2y0b_G 2v4h_C
Probab=99.86 E-value=7.4e-22 Score=128.27 Aligned_cols=102 Identities=22% Similarity=0.232 Sum_probs=94.7
Q ss_pred ccCCCCchhHHHHhhhhhhhhHHHHHHHHHhhccccccccccCCCcHHHHHHHcCCHHHHHHHHHhhhhccCCCCCCcch
Q 041785 54 TVHTKNTILHINIICQETENASTKFVEEILEICPALLLQVNAKGDTPLHLAAKYSHFDIVRVLIERAQLAQHGDEEPESG 133 (181)
Q Consensus 54 ~~~~g~t~Lh~a~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~g~t~L~~a~~~~~~~~~~~L~~~~~~~~~~~~~~~~~ 133 (181)
....+.||||+| +..|+.+++++|++. +.+++.++..|.||||+|+..++.+++++|++.|+++
T Consensus 10 ~~~~~~t~l~~A--~~~g~~~~v~~Ll~~----g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~---------- 73 (136)
T 2jab_A 10 HGSDLGKKLLEA--ARAGQDDEVRILMAN----GADVNAKDEYGLTPLYLATAHGHLEIVEVLLKNGADV---------- 73 (136)
T ss_dssp --CHHHHHHHHH--HHHTCHHHHHHHHHT----TCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCT----------
T ss_pred ccccccHHHHHH--HHhCCHHHHHHHHHc----CCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHHcCCCC----------
Confidence 356789999999 999999999999997 8999999999999999999999999999999999887
Q ss_pred HHHHHHHhhcccCCCchHHHHHHHcCCHHHHHHHHHcCCCCCCCcC
Q 041785 134 IEAFRQMIRMVNNEKNTALHEAVSHGNVEVVKILTREDPDYPYSAN 179 (181)
Q Consensus 134 ~~~~~~~~~~~~~~g~t~l~~A~~~~~~~~~~~Ll~~g~~~~~~~~ 179 (181)
+.+|..|+||||+|+..|+.+++++|+++|++++..+.
T Consensus 74 --------~~~d~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~ 111 (136)
T 2jab_A 74 --------NAVDAIGFTPLHLAAFIGHLEIAEVLLKHGADVNAQDK 111 (136)
T ss_dssp --------TCCCTTCCCHHHHHHHHTCHHHHHHHHHTTCCTTCCCT
T ss_pred --------CcCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCcCcCC
Confidence 88999999999999999999999999999999987764
No 101
>1n0r_A 4ANK, 4 ankyrin repeats; structural protein; 1.50A {} SCOP: k.37.1.1
Probab=99.86 E-value=5e-21 Score=122.17 Aligned_cols=99 Identities=29% Similarity=0.417 Sum_probs=93.5
Q ss_pred CCCchhHHHHhhhhhhhhHHHHHHHHHhhccccccccccCCCcHHHHHHHcCCHHHHHHHHHhhhhccCCCCCCcchHHH
Q 041785 57 TKNTILHINIICQETENASTKFVEEILEICPALLLQVNAKGDTPLHLAAKYSHFDIVRVLIERAQLAQHGDEEPESGIEA 136 (181)
Q Consensus 57 ~g~t~Lh~a~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~g~t~L~~a~~~~~~~~~~~L~~~~~~~~~~~~~~~~~~~~ 136 (181)
+|.||||+| +..++.+++++|++. +.+++.++..|.||||+|+..++.+++++|++.|.++
T Consensus 1 ~g~t~L~~A--~~~~~~~~v~~Ll~~----~~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~------------- 61 (126)
T 1n0r_A 1 NGRTPLHLA--ARNGHLEVVKLLLEA----GADVNAKDKNGRTPLHLAARNGHLEVVKLLLEAGADV------------- 61 (126)
T ss_dssp CCCCHHHHH--HHHTCHHHHHHHHHH----TCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCT-------------
T ss_pred CCccHHHHH--HHcCcHHHHHHHHHc----CCCCCCcCCCCCcHHHHHHHcCcHHHHHHHHHcCCCC-------------
Confidence 589999999 999999999999997 8899999999999999999999999999999999887
Q ss_pred HHHHhhcccCCCchHHHHHHHcCCHHHHHHHHHcCCCCCCCcC
Q 041785 137 FRQMIRMVNNEKNTALHEAVSHGNVEVVKILTREDPDYPYSAN 179 (181)
Q Consensus 137 ~~~~~~~~~~~g~t~l~~A~~~~~~~~~~~Ll~~g~~~~~~~~ 179 (181)
+.++..|.||||+|+..++.+++++|+++|++++..+.
T Consensus 62 -----~~~~~~g~t~l~~A~~~~~~~~~~~Ll~~g~~~~~~~~ 99 (126)
T 1n0r_A 62 -----NAKDKNGRTPLHLAARNGHLEVVKLLLEAGADVNAKDK 99 (126)
T ss_dssp -----TCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCT
T ss_pred -----cccCCCCCcHHHHHHHcChHHHHHHHHHcCCCCcccCC
Confidence 88899999999999999999999999999999987754
No 102
>2b0o_E UPLC1; arfgap, structural genomics, structural genomics consortium, SGC, metal binding protein; 2.06A {Homo sapiens}
Probab=99.86 E-value=8.4e-22 Score=144.17 Aligned_cols=111 Identities=21% Similarity=0.098 Sum_probs=96.2
Q ss_pred cccCCCHHHHHHHHc---CCcHHHHHHHHHhcccccccCCCCchhHHHHhhhhhhhhHHHHHHHHHhhccccccccccCC
Q 041785 21 KQSQMDPNLFKAAAD---GSVEPFKDMAREVIESSLTVHTKNTILHINIICQETENASTKFVEEILEICPALLLQVNAKG 97 (181)
Q Consensus 21 ~~~~~~t~l~~a~~~---g~~~~~~~ll~~~~~~~~~~~~g~t~Lh~a~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~g 97 (181)
....|.||||+|+.. |+.+++++|++.|++++.+|..|.||||+| +..++.+++++|++. |++++.+|..|
T Consensus 186 ~~~~g~t~Lh~A~~~~~~~~~~iv~~Ll~~gadvn~~d~~G~TpLh~A--~~~g~~~~v~~Ll~~----gad~~~~d~~G 259 (301)
T 2b0o_E 186 AQAPEELVLHLAVKVANQASLPLVDFIIQNGGHLDAKAADGNTALHYA--ALYNQPDCLKLLLKG----RALVGTVNEAG 259 (301)
T ss_dssp SCSCEECHHHHHHHTCCTTTHHHHHHHHHHSSCTTCCCTTCCCHHHHH--HHTTCHHHHHHHHHT----TCCCSCCCTTS
T ss_pred cCCCCccHHHHHHHhcccCcHHHHHHHHhcCCCCCCCCCCCCCHHHHH--HHcCCHHHHHHHHHc----CCCCCCcCCCC
Confidence 355788999999997 899999999999999998999999999999 999999999999997 99999999999
Q ss_pred CcHHHHHHHcCCHHHHHHHHHhhhhccCCCCCCcchHHHHHHHhhcccCCCchHHHHHHHcCCH
Q 041785 98 DTPLHLAAKYSHFDIVRVLIERAQLAQHGDEEPESGIEAFRQMIRMVNNEKNTALHEAVSHGNV 161 (181)
Q Consensus 98 ~t~L~~a~~~~~~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~t~l~~A~~~~~~ 161 (181)
.||||+|+..++.+++++|++.|++. |.||||+|+..|+.
T Consensus 260 ~TpL~~A~~~~~~~iv~~Ll~~ga~~------------------------g~tpLh~A~~~g~~ 299 (301)
T 2b0o_E 260 ETALDIARKKHHKECEELLEQAQAGT------------------------FAFPLHVDYSWVIS 299 (301)
T ss_dssp CCHHHHHHHHTCHHHHHHHHHHHHHT------------------------TSSCCC--------
T ss_pred CCHHHHHHHcCCHHHHHHHHHhcCCC------------------------CCChhHHHHhcCCc
Confidence 99999999999999999999988653 79999999998763
No 103
>2aja_A Ankyrin repeat family protein; NESG, Q5ZSV0, structural genomics, PSI, protein structure initiative; 2.80A {Legionella pneumophila} SCOP: a.118.24.1
Probab=99.85 E-value=9.5e-23 Score=153.14 Aligned_cols=124 Identities=15% Similarity=0.163 Sum_probs=102.1
Q ss_pred CCCHHHHHHHHcCCcHHHHHHHHHhcccc---cccCCCCchhHHHHhhhhhhhhHHHHHHHHHhhcccc---ccccccCC
Q 041785 24 QMDPNLFKAAADGSVEPFKDMAREVIESS---LTVHTKNTILHINIICQETENASTKFVEEILEICPAL---LLQVNAKG 97 (181)
Q Consensus 24 ~~~t~l~~a~~~g~~~~~~~ll~~~~~~~---~~~~~g~t~Lh~a~~~~~~~~~~~~~l~~~~~~~~~~---~~~~~~~g 97 (181)
.+.||||+|+..|+.+++++|++.|.... ..+..|.||||+| +..|+.+++++|++. +++ .+..+..
T Consensus 91 ~~~T~Lh~Aa~~G~~e~v~~Ll~~ga~~~~~~~~~~~~~tpL~~A--a~~G~~eiv~~Ll~~----gad~~~~~i~~~~- 163 (376)
T 2aja_A 91 KSEVICFVAAITGCSSALDTLCLLLTSDEIVKVIQAENYQAFRLA--AENGHLHVLNRLCEL----APTEIMAMIQAEN- 163 (376)
T ss_dssp CHHHHHHHHHHHCCHHHHHHHTTC--CCSSCC--CHHHHHHHHHH--HHTTCHHHHHHHHHS----CTTTHHHHHSHHH-
T ss_pred CcCCHHHHHHHcCCHHHHHHHHHcCCcHHHHHHhccCCCCHHHHH--HHcCCHHHHHHHHhC----CCCccccccCCCC-
Confidence 45699999999999999999999876221 2355688999999 999999999999986 643 2333333
Q ss_pred CcHHHHHHHcCCHHHHHHHHHhhhhccCCCCCCcchHHHHHHHhhc--ccCCCchHHHHHH-HcCCHHHHHHHHHcCC
Q 041785 98 DTPLHLAAKYSHFDIVRVLIERAQLAQHGDEEPESGIEAFRQMIRM--VNNEKNTALHEAV-SHGNVEVVKILTREDP 172 (181)
Q Consensus 98 ~t~L~~a~~~~~~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~g~t~l~~A~-~~~~~~~~~~Ll~~g~ 172 (181)
.||||+|+..|+.+++++|++.|+++ +. +|..|+||||+|+ ..|+.+++++|++.|+
T Consensus 164 ~TpLh~Aa~~G~~eiv~~Ll~~ga~~------------------~~~~~d~~g~TpL~~Aa~~~G~~eiv~~Ll~~ga 223 (376)
T 2aja_A 164 YHAFRLAAENGHLHVLNRLCELAPTE------------------ATAMIQAENYYAFRWAAVGRGHHNVINFLLDCPV 223 (376)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHSCGGG------------------HHHHHHHHHHHHHHHHHSTTCCHHHHHHHTTSHH
T ss_pred CCHHHHHHHCCCHHHHHHHHHcCCcc------------------chhccCCCCCCHHHHHHHHCCCHHHHHHHHhCCC
Confidence 89999999999999999999999886 55 7788999999999 9999999999998764
No 104
>3ehr_A Osteoclast-stimulating factor 1; beta barrel, helix-turn-helix, SH3, ankyrin repeat, signaling protein, ANK repeat, cytoplasm, phosphoprotein; 1.95A {Homo sapiens} PDB: 3ehq_A
Probab=99.85 E-value=2.9e-21 Score=135.25 Aligned_cols=103 Identities=19% Similarity=0.180 Sum_probs=96.2
Q ss_pred ccCCCCchhHHHHhhhhhhhhHHHHHHHHHhhccccccccccCCCcHHHHHHHcCCHHHHHHHHHh-hhhccCCCCCCcc
Q 041785 54 TVHTKNTILHINIICQETENASTKFVEEILEICPALLLQVNAKGDTPLHLAAKYSHFDIVRVLIER-AQLAQHGDEEPES 132 (181)
Q Consensus 54 ~~~~g~t~Lh~a~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~g~t~L~~a~~~~~~~~~~~L~~~-~~~~~~~~~~~~~ 132 (181)
.+..|.||||+| +..|+.++++.|++. +.+++.++..|+||||+|+..|+.+++++|++. |+++
T Consensus 69 ~~~~g~t~L~~A--~~~g~~~~v~~Ll~~----g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~g~~~--------- 133 (222)
T 3ehr_A 69 QAESIDNPLHEA--AKRGNLSWLRECLDN----RVGVNGLDKAGSTALYWACHGGHKDIVEMLFTQPNIEL--------- 133 (222)
T ss_dssp HEEEESCHHHHH--HHHTCHHHHHHHHHT----TCCTTCCCTTSCCHHHHHHHTTCHHHHHHHTTSTTCCC---------
T ss_pred cccccccccccc--cccCcHHHHHHHHhC----CCCccccCCCCCCHHHHHHHcCCHHHHHHHHcCCCCCc---------
Confidence 456789999999 999999999999986 899999999999999999999999999999998 8887
Q ss_pred hHHHHHHHhhcccCCCchHHHHHHHcCCHHHHHHHHHcCCCCCCCcCC
Q 041785 133 GIEAFRQMIRMVNNEKNTALHEAVSHGNVEVVKILTREDPDYPYSANN 180 (181)
Q Consensus 133 ~~~~~~~~~~~~~~~g~t~l~~A~~~~~~~~~~~Ll~~g~~~~~~~~~ 180 (181)
+.+|..|+||||+|+..|+.+++++|+++|++++..+..
T Consensus 134 ---------~~~d~~g~tpL~~A~~~~~~~~v~~Ll~~ga~~~~~~~~ 172 (222)
T 3ehr_A 134 ---------NQQNKLGDTALHAAAWKGYADIVQLLLAKGARTDLRNIE 172 (222)
T ss_dssp ---------CCCCTTSCCHHHHHHHHTCHHHHHHHHHHTCCSCCCCTT
T ss_pred ---------cccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCccccCC
Confidence 889999999999999999999999999999999887653
No 105
>1sw6_A Regulatory protein SWI6; transcription regulation, ankyrin repeats, cell-cycle; 2.10A {Saccharomyces cerevisiae} SCOP: d.211.1.1
Probab=99.84 E-value=9.4e-22 Score=145.45 Aligned_cols=119 Identities=14% Similarity=0.044 Sum_probs=104.7
Q ss_pred HHHHHHHcCCcHHHHHHHHHhccccc-ccCCCCchhHHHHhhhhhhhhHHHHHHHHHhhccccccccccCCCcHHHHHHH
Q 041785 28 NLFKAAADGSVEPFKDMAREVIESSL-TVHTKNTILHINIICQETENASTKFVEEILEICPALLLQVNAKGDTPLHLAAK 106 (181)
Q Consensus 28 ~l~~a~~~g~~~~~~~ll~~~~~~~~-~~~~g~t~Lh~a~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~g~t~L~~a~~ 106 (181)
.+|.++..+..++++.|++.|++++. ++..|.||||+| +..|+.+++++|++. |++++.++..|+||||+|+.
T Consensus 100 ~~~~a~~~~~~~~~~~l~~~g~dvn~~~d~~g~TpLh~A--a~~g~~~~v~~Ll~~----Gad~n~~d~~g~TpLh~A~~ 173 (327)
T 1sw6_A 100 QQHVSFDSLLQEVNDAFPNTQLNLNIPVDEHGNTPLHWL--TSIANLELVKHLVKH----GSNRLYGDNMGESCLVKAVK 173 (327)
T ss_dssp ----CHHHHHHHHHHHCTTSCCCSCSCCSTTCCCHHHHH--HHTTCHHHHHHHHHT----TCCTTBCCTTCCCHHHHHHH
T ss_pred hhHHHHHhhHHHHHHHHHhcCCCcccccCCCCCcHHHHH--HHcCCHHHHHHHHHc----CCCCCCcCCCCCCHHHHHHH
Confidence 34677777777888888888999988 899999999999 999999999999997 99999999999999999999
Q ss_pred cCC---HHHHHHHHHhh-hhccCCCCCCcchHHHHHHHhhcccCCCchHHHHHHH----cCCHHHHHHHHHc
Q 041785 107 YSH---FDIVRVLIERA-QLAQHGDEEPESGIEAFRQMIRMVNNEKNTALHEAVS----HGNVEVVKILTRE 170 (181)
Q Consensus 107 ~~~---~~~~~~L~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~g~t~l~~A~~----~~~~~~~~~Ll~~ 170 (181)
.|+ .++++.|++.+ .++ +.+|..|+||||+|+. .|+.+++++|++.
T Consensus 174 ~g~~~~~~~~~~ll~~~~~~~------------------~~~d~~g~tpLh~A~~~~~~~g~~~~v~~Ll~~ 227 (327)
T 1sw6_A 174 SVNNYDSGTFEALLDYLYPCL------------------ILEDSMNRTILHHIIITSGMTGCSAAAKYYLDI 227 (327)
T ss_dssp SSHHHHTTCHHHHHHHHGGGG------------------GEECTTCCCHHHHHHHHHTSTTCHHHHHHHHHH
T ss_pred hcccccHHHHHHHHHhhhccc------------------cCCCCCCCCHHHHHHHHccccccHHHHHHHHHH
Confidence 998 67888888887 445 8899999999999999 8999999999987
No 106
>3deo_A Signal recognition particle 43 kDa protein; chloroplast SRP system, signal sequence, ankyrin repeat, chromodomain, type I turn; 1.50A {Arabidopsis thaliana} SCOP: b.34.13.2 k.37.1.1 PDB: 3dep_A 1x32_A
Probab=99.84 E-value=3.7e-21 Score=131.00 Aligned_cols=100 Identities=22% Similarity=0.152 Sum_probs=93.1
Q ss_pred cCCCCchhHHHHhhhhhhhhHHHHHHHHHhhccccccccccCCCcHHHHHHHcCCHHHHHHHHHhhhhccCCCCCCcchH
Q 041785 55 VHTKNTILHINIICQETENASTKFVEEILEICPALLLQVNAKGDTPLHLAAKYSHFDIVRVLIERAQLAQHGDEEPESGI 134 (181)
Q Consensus 55 ~~~g~t~Lh~a~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~g~t~L~~a~~~~~~~~~~~L~~~~~~~~~~~~~~~~~~ 134 (181)
+..|.||||+| +..++.++++.|++ +.+++.++..|+||||+|+..++.+++++|++.|+++
T Consensus 41 ~~~g~t~L~~A--~~~g~~~~v~~Ll~-----~~~~~~~d~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~----------- 102 (183)
T 3deo_A 41 VSEYETPWWTA--ARKADEQALSQLLE-----DRDVDAVDENGRTALLFVAGLGSDKCVRLLAEAGADL----------- 102 (183)
T ss_dssp HHHHHHHHHHH--HHTTCHHHHHHHTT-----TSCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCT-----------
T ss_pred CCCCCCHHHHH--HHcCCHHHHHHHHh-----cCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHHcCCCC-----------
Confidence 45789999999 99999999999987 6789999999999999999999999999999999988
Q ss_pred HHHHHHhhccc-CCCchHHHHHHHcCCHHHHHHHHHcCCCCCCCcC
Q 041785 135 EAFRQMIRMVN-NEKNTALHEAVSHGNVEVVKILTREDPDYPYSAN 179 (181)
Q Consensus 135 ~~~~~~~~~~~-~~g~t~l~~A~~~~~~~~~~~Ll~~g~~~~~~~~ 179 (181)
+.++ ..|+||||+|+..|+.+++++|+++|++++..+.
T Consensus 103 -------~~~~~~~g~tpL~~A~~~~~~~~v~~Ll~~ga~~~~~d~ 141 (183)
T 3deo_A 103 -------DHRDMRGGLTALHMAAGYVRPEVVEALVELGADIEVEDE 141 (183)
T ss_dssp -------TCCCSSSSCCHHHHHHHTTCHHHHHHHHHHTCCTTCCCT
T ss_pred -------CcCCCCCCCCHHHHHHhcCcHHHHHHHHHcCCCCcCCCC
Confidence 7777 8899999999999999999999999999988765
No 107
>1bi7_B P16INK4A, MTS1, multiple tumor suppressor; cyclin dependent kinase, cyclin dependent kinase inhibitory protein, CDK, cell cycle; 3.40A {Homo sapiens} SCOP: d.211.1.1 PDB: 1a5e_A 1dc2_A 2a5e_A
Probab=99.84 E-value=1.6e-21 Score=129.59 Aligned_cols=110 Identities=20% Similarity=0.076 Sum_probs=88.0
Q ss_pred cccCCCHHHHHHHHcCCcHHHHHHHHHhcccccccCCCCc-hhHHHHhhhhhhhhHHHHHHHHHhhccccccccccCCCc
Q 041785 21 KQSQMDPNLFKAAADGSVEPFKDMAREVIESSLTVHTKNT-ILHINIICQETENASTKFVEEILEICPALLLQVNAKGDT 99 (181)
Q Consensus 21 ~~~~~~t~l~~a~~~g~~~~~~~ll~~~~~~~~~~~~g~t-~Lh~a~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~g~t 99 (181)
....|.||||+|+ .|+.+++++|++.|++++.++..|.| |||+| +..++.+++++|++. +++++.++..|.|
T Consensus 41 ~~~~g~t~L~~A~-~~~~~~v~~Ll~~g~~~~~~d~~g~ttpL~~A--~~~~~~~~v~~Ll~~----ga~~~~~d~~g~t 113 (156)
T 1bi7_B 41 PNSYGRRPIQVMM-MGSARVAELLLLHGAEPNCADPATLTRPVHDA--AREGFLDTLVVLHRA----GARLDVRDAWGRL 113 (156)
T ss_dssp CCSSSCCTTTSSC-TTCHHHHHHHHTTTCCCCCCCTTTCCCHHHHH--HHHTCHHHHHHHHHH----TCCSSCCCTTCCC
T ss_pred CCCCCCCHHHHHH-cCCHHHHHHHHHcCCCCCCcCCCCCcHHHHHH--HHCCCHHHHHHHHHc----CCCCcccCCCCCC
Confidence 3457899999985 99999999999999999989999999 99999 999999999999998 9999999999999
Q ss_pred HHHHHHHcCCHHHHHHHHHhhhhccCCCCCCcchHHHHHHHhhcccCCCchHHHHH
Q 041785 100 PLHLAAKYSHFDIVRVLIERAQLAQHGDEEPESGIEAFRQMIRMVNNEKNTALHEA 155 (181)
Q Consensus 100 ~L~~a~~~~~~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~t~l~~A 155 (181)
|||+|+..++.+++++|++.|+++ +.++..|.||.+-+
T Consensus 114 pl~~A~~~~~~~~v~~Ll~~ga~~------------------~~~~~~g~t~~~~~ 151 (156)
T 1bi7_B 114 PVDLAEELGHRDVARYLRAAAGGT------------------RGSNHARIDAAEGP 151 (156)
T ss_dssp HHHHHHHHTCHHHHHHHSSCC-----------------------------------
T ss_pred HHHHHHHhCHHHHHHHHHHcCCCC------------------CccCcCcCcccccC
Confidence 999999999999999999999998 88888999987743
No 108
>3ui2_A Signal recognition particle 43 kDa protein, chlor; ankyrin repeat, chromodomain, aromatic CAGE, signal recognit particle, protein targeting; 3.18A {Arabidopsis thaliana} PDB: 1x3q_A 2hug_A
Probab=99.82 E-value=1.9e-20 Score=133.09 Aligned_cols=127 Identities=19% Similarity=0.117 Sum_probs=105.5
Q ss_pred CCHHHHHHHHcCCcHHHHHHHHHhcccccccCCCCchhHHHHhhhhhhhhHHHHHHHHHhhccccccccccCCCcHHHHH
Q 041785 25 MDPNLFKAAADGSVEPFKDMAREVIESSLTVHTKNTILHINIICQETENASTKFVEEILEICPALLLQVNAKGDTPLHLA 104 (181)
Q Consensus 25 ~~t~l~~a~~~g~~~~~~~ll~~~~~~~~~~~~g~t~Lh~a~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~g~t~L~~a 104 (181)
+.++++.++..|+...+..+...+.+ .+..|.||||+| +..|+.++++.|+. +.+++.++..|+||||+|
T Consensus 15 ~~~~~l~~~~~g~~~~~~~~~~~~~~---~~~~g~t~L~~A--~~~g~~~~v~~Ll~-----~~~~~~~d~~g~t~L~~A 84 (244)
T 3ui2_A 15 GAMEYLIEWKDGHSPSWVPSSYIAAD---VVSEYETPWWTA--ARKADEQALSQLLE-----DRDVDAVDENGRTALLFV 84 (244)
T ss_dssp TEEEEEEEESSCCCCEEEEGGGSCHH---HHHHHHHHHHHH--HTTTCHHHHHHTTT-----TCCTTCBCTTSCBHHHHH
T ss_pred CccHHHHHHHcCCCcccccccccccc---cccCCCCHHHHH--HHcCCHHHHHHHHc-----CCCCCCcCCCCCCHHHHH
Confidence 33445555556665554443332222 245789999999 99999999999887 678999999999999999
Q ss_pred HHcCCHHHHHHHHHhhhhccCCCCCCcchHHHHHHHhhccc-CCCchHHHHHHHcCCHHHHHHHHHcCCCCCCCcC
Q 041785 105 AKYSHFDIVRVLIERAQLAQHGDEEPESGIEAFRQMIRMVN-NEKNTALHEAVSHGNVEVVKILTREDPDYPYSAN 179 (181)
Q Consensus 105 ~~~~~~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~g~t~l~~A~~~~~~~~~~~Ll~~g~~~~~~~~ 179 (181)
+..|+.+++++|++.|+++ +.++ ..|+||||+|+..|+.+++++|+++|++++..++
T Consensus 85 ~~~g~~~~v~~Ll~~ga~~------------------~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~~d~ 142 (244)
T 3ui2_A 85 AGLGSDKCVRLLAEAGADL------------------DHRDMRGGLTALHMAAGYVRPEVVEALVELGADIEVEDE 142 (244)
T ss_dssp HHHTCHHHHHHHHHTTCCT------------------TCCCSSSCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCT
T ss_pred HHCCCHHHHHHHHHcCCCC------------------CcCCCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCCCCC
Confidence 9999999999999999988 7777 8899999999999999999999999999988765
No 109
>2zgd_A 3 repeat synthetic ankyrin; ankyrin repeat, hydroxylated, de novo protein; 1.90A {Synthetic} PDB: 2zgg_A 2xen_A
Probab=99.82 E-value=3.6e-20 Score=116.08 Aligned_cols=89 Identities=22% Similarity=0.339 Sum_probs=51.4
Q ss_pred cCCCCchhHHHHhhhhhhhhHHHHHHHHHhhccccccccccCCCcHHHHHHHcCCHHHHHHHHHhhhhccCCCCCCcchH
Q 041785 55 VHTKNTILHINIICQETENASTKFVEEILEICPALLLQVNAKGDTPLHLAAKYSHFDIVRVLIERAQLAQHGDEEPESGI 134 (181)
Q Consensus 55 ~~~g~t~Lh~a~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~g~t~L~~a~~~~~~~~~~~L~~~~~~~~~~~~~~~~~~ 134 (181)
+..|.|+||+| +..++.+++++|++. +++++.++..|.||||+|+..++.+++++|++.|+++
T Consensus 21 ~~~g~t~L~~A--~~~g~~~~v~~Ll~~----g~~i~~~d~~g~tpLh~A~~~~~~~~v~~Ll~~ga~~----------- 83 (110)
T 2zgd_A 21 GSDLGKKLLEA--ARAGQDDEVRILMAN----GADVAAKDKNGSTPLHLAARNGHLEVVKLLLEAGADV----------- 83 (110)
T ss_dssp -CCHHHHHHHH--HHHTCHHHHHHHHHT----TCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCCT-----------
T ss_pred CCccchHHHHH--HHcCCHHHHHHHHHc----CCCCCccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCc-----------
Confidence 44555566665 555555555555554 5555555555666666666666666666666655554
Q ss_pred HHHHHHhhcccCCCchHHHHHHHcCCHHHHHHH
Q 041785 135 EAFRQMIRMVNNEKNTALHEAVSHGNVEVVKIL 167 (181)
Q Consensus 135 ~~~~~~~~~~~~~g~t~l~~A~~~~~~~~~~~L 167 (181)
+.+|..|+||||+|+..|+.+++++|
T Consensus 84 -------~~~d~~g~tpl~~A~~~~~~~~~~~L 109 (110)
T 2zgd_A 84 -------XAQDKFGKTAFDISIDNGNEDLAEIL 109 (110)
T ss_dssp -------TCCCTTSCCHHHHHHHHTCHHHHHHH
T ss_pred -------cccccCCCcHHHHHHHcCCHHHHHHh
Confidence 55555566666666666666655554
No 110
>2aja_A Ankyrin repeat family protein; NESG, Q5ZSV0, structural genomics, PSI, protein structure initiative; 2.80A {Legionella pneumophila} SCOP: a.118.24.1
Probab=99.81 E-value=2.2e-22 Score=151.19 Aligned_cols=120 Identities=11% Similarity=0.111 Sum_probs=104.8
Q ss_pred CCCHHHHHHHHcCCcHHHHHHHHHhcc---cccccCCCCchhHHHHhhhhhhhhHHHHHHHHHhhccccccc--cccCCC
Q 041785 24 QMDPNLFKAAADGSVEPFKDMAREVIE---SSLTVHTKNTILHINIICQETENASTKFVEEILEICPALLLQ--VNAKGD 98 (181)
Q Consensus 24 ~~~t~l~~a~~~g~~~~~~~ll~~~~~---~~~~~~~g~t~Lh~a~~~~~~~~~~~~~l~~~~~~~~~~~~~--~~~~g~ 98 (181)
.+.||||+|+..|+.+++++|++.|++ .+..+.+ .||||+| +..|+.+++++|++. +++++. ++..|.
T Consensus 127 ~~~tpL~~Aa~~G~~eiv~~Ll~~gad~~~~~i~~~~-~TpLh~A--a~~G~~eiv~~Ll~~----ga~~~~~~~d~~g~ 199 (376)
T 2aja_A 127 ENYQAFRLAAENGHLHVLNRLCELAPTEIMAMIQAEN-YHAFRLA--AENGHLHVLNRLCEL----APTEATAMIQAENY 199 (376)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHSCTTTHHHHHSHHH-HHHHHHH--HHTTCHHHHHHHHHS----CGGGHHHHHHHHHH
T ss_pred CCCCHHHHHHHcCCHHHHHHHHhCCCCccccccCCCC-CCHHHHH--HHCCCHHHHHHHHHc----CCccchhccCCCCC
Confidence 456899999999999999999999864 2222333 9999999 999999999999997 888777 888899
Q ss_pred cHHHHHH-HcCCHHHHHHHHHhhhhccCCCCCCcchHHHHHHHhhcccCCCchHHHHHHHcCCHHHHHHHHHcCCCCC
Q 041785 99 TPLHLAA-KYSHFDIVRVLIERAQLAQHGDEEPESGIEAFRQMIRMVNNEKNTALHEAVSHGNVEVVKILTREDPDYP 175 (181)
Q Consensus 99 t~L~~a~-~~~~~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~t~l~~A~~~~~~~~~~~Ll~~g~~~~ 175 (181)
||||+|+ ..|+.+++++|++.|+. |.||+++|+..|+.+++++|+++|++++
T Consensus 200 TpL~~Aa~~~G~~eiv~~Ll~~ga~-------------------------~~taL~~Aa~~g~~evv~lL~~~ga~~~ 252 (376)
T 2aja_A 200 YAFRWAAVGRGHHNVINFLLDCPVM-------------------------LAYAEIHEFEYGEKYVNPFIARHVNRLK 252 (376)
T ss_dssp HHHHHHHSTTCCHHHHHHHTTSHHH-------------------------HHHHHHCTTTTTTTTHHHHHHHHHHHHH
T ss_pred CHHHHHHHHCCCHHHHHHHHhCCCc-------------------------cchHHHHHHHCCCHHHHHHHHhcCcccc
Confidence 9999999 99999999999996532 6899999999999999999999988764
No 111
>2zgd_A 3 repeat synthetic ankyrin; ankyrin repeat, hydroxylated, de novo protein; 1.90A {Synthetic} PDB: 2zgg_A 2xen_A
Probab=99.80 E-value=2e-19 Score=112.64 Aligned_cols=91 Identities=16% Similarity=0.206 Sum_probs=84.0
Q ss_pred hcccCCCHHHHHHHHcCCcHHHHHHHHHhcccccccCCCCchhHHHHhhhhhhhhHHHHHHHHHhhccccccccccCCCc
Q 041785 20 IKQSQMDPNLFKAAADGSVEPFKDMAREVIESSLTVHTKNTILHINIICQETENASTKFVEEILEICPALLLQVNAKGDT 99 (181)
Q Consensus 20 ~~~~~~~t~l~~a~~~g~~~~~~~ll~~~~~~~~~~~~g~t~Lh~a~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~g~t 99 (181)
.....+.|+||+|+..|+.+++++|++.|++++.++..|.||||+| +..++.+++++|++. +++++.++..|.|
T Consensus 19 ~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~i~~~d~~g~tpLh~A--~~~~~~~~v~~Ll~~----ga~~~~~d~~g~t 92 (110)
T 2zgd_A 19 HMGSDLGKKLLEAARAGQDDEVRILMANGADVAAKDKNGSTPLHLA--ARNGHLEVVKLLLEA----GADVXAQDKFGKT 92 (110)
T ss_dssp ---CCHHHHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTCCCHHHHH--HHTTCHHHHHHHHHT----TCCTTCCCTTSCC
T ss_pred ccCCccchHHHHHHHcCCHHHHHHHHHcCCCCCccCCCCCCHHHHH--HHcCCHHHHHHHHHc----CCCccccccCCCc
Confidence 4456788999999999999999999999999988899999999999 999999999999997 9999999999999
Q ss_pred HHHHHHHcCCHHHHHHH
Q 041785 100 PLHLAAKYSHFDIVRVL 116 (181)
Q Consensus 100 ~L~~a~~~~~~~~~~~L 116 (181)
|||+|+..++.+++++|
T Consensus 93 pl~~A~~~~~~~~~~~L 109 (110)
T 2zgd_A 93 AFDISIDNGNEDLAEIL 109 (110)
T ss_dssp HHHHHHHHTCHHHHHHH
T ss_pred HHHHHHHcCCHHHHHHh
Confidence 99999999999999876
No 112
>1dcq_A PYK2-associated protein beta; zinc-binding module, ankyrin repeats, metal binding protein; 2.10A {Mus musculus} SCOP: d.211.1.1 g.45.1.1
Probab=99.80 E-value=2.8e-19 Score=129.39 Aligned_cols=96 Identities=18% Similarity=0.172 Sum_probs=91.1
Q ss_pred ccCCCHHHHHHHHc---CCcHHHHHHHHHhcccccccCCCCchhHHHHhhhhhhhhHHHHHHHHHhhccccccccccCCC
Q 041785 22 QSQMDPNLFKAAAD---GSVEPFKDMAREVIESSLTVHTKNTILHINIICQETENASTKFVEEILEICPALLLQVNAKGD 98 (181)
Q Consensus 22 ~~~~~t~l~~a~~~---g~~~~~~~ll~~~~~~~~~~~~g~t~Lh~a~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~g~ 98 (181)
...|.||||+|+.. |+.++++.|++.|++++.+|..|.||||+| +..++.+++++|++. |++++.+|..|.
T Consensus 166 ~~~g~t~Lh~A~~~~~~~~~~~v~~Ll~~ga~in~~d~~g~TpLh~A--~~~g~~~~v~~Ll~~----gad~~~~d~~g~ 239 (278)
T 1dcq_A 166 HEPDETALHLAVRSVDRTSLHIVDFLVQNSGNLDKQTGKGSTALHYC--CLTDNAECLKLLLRG----KASIEIANESGE 239 (278)
T ss_dssp SSTTCBHHHHHHHHCCTTTHHHHHHHHHHCSCTTCCCTTCCCHHHHH--HHTTCHHHHHHHHHT----TCCTTCCCTTSC
T ss_pred ccCCCCcchHHHHhcccchHHHHHHHHHCCCCccccCCCCCCHHHHH--HHcCCHHHHHHHHHc----CCCCCCccCCCC
Confidence 45689999999999 899999999999999999999999999999 999999999999996 999999999999
Q ss_pred cHHHHHHHcCCHHHHHHHHHhhhhc
Q 041785 99 TPLHLAAKYSHFDIVRVLIERAQLA 123 (181)
Q Consensus 99 t~L~~a~~~~~~~~~~~L~~~~~~~ 123 (181)
||||+|+..|+.+++++|++.|+..
T Consensus 240 tpL~~A~~~~~~~~v~~Ll~~ga~~ 264 (278)
T 1dcq_A 240 TPLDIAKRLKHEHCEELLTQALSGR 264 (278)
T ss_dssp CHHHHHHHTTCHHHHHHHHHHHTTC
T ss_pred CHHHHHHHcCCHHHHHHHHHcCCCC
Confidence 9999999999999999999998764
No 113
>3lvq_E ARF-GAP with SH3 domain, ANK repeat and PH domain containing protein 3, ADP-ribosylation...; GDP, ASAP3, UPLC1, linkers, alternat splicing; HET: GDP; 3.38A {Homo sapiens} PDB: 3lvr_E*
Probab=99.78 E-value=5.4e-19 Score=137.44 Aligned_cols=96 Identities=21% Similarity=0.143 Sum_probs=90.2
Q ss_pred ccCCCHHHHHHHH---cCCcHHHHHHHHHhcccccccCCCCchhHHHHhhhhhhhhHHHHHHHHHhhccccccccccCCC
Q 041785 22 QSQMDPNLFKAAA---DGSVEPFKDMAREVIESSLTVHTKNTILHINIICQETENASTKFVEEILEICPALLLQVNAKGD 98 (181)
Q Consensus 22 ~~~~~t~l~~a~~---~g~~~~~~~ll~~~~~~~~~~~~g~t~Lh~a~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~g~ 98 (181)
...|.||||+|+. .|+.++++.|++.|++++.+|..|.||||+| +..|+.+++++|++. |++++.+|..|.
T Consensus 168 ~~~g~t~Lh~A~~~a~~g~~~~v~~Ll~~ga~vn~~d~~g~TpLh~A--~~~g~~~~v~~Ll~~----ga~~~~~d~~g~ 241 (497)
T 3lvq_E 168 QAPEELVLHLAVKVANQASLPLVDFIIQNGGHLDAKAADGNTALHYA--ALYNQPDCLKLLLKG----RALVGTVNEAGE 241 (497)
T ss_dssp CCSCBCHHHHHHHTCCTTTHHHHHHHHHHSCCTTCCCSSSCCHHHHH--TTTTCHHHHHHHHHT----CCCCSCCCTTCC
T ss_pred ccccchHHHHHHHhcccccHHHHHHHHHcCCCCCccCCCCCcHHHHH--HHcCCHHHHHHHHHc----CCCCCCcCCCCC
Confidence 4578999999976 8999999999999999999999999999999 999999999999997 999999999999
Q ss_pred cHHHHHHHcCCHHHHHHHHHhhhhc
Q 041785 99 TPLHLAAKYSHFDIVRVLIERAQLA 123 (181)
Q Consensus 99 t~L~~a~~~~~~~~~~~L~~~~~~~ 123 (181)
||||+|+..|+.+++++|++.|+++
T Consensus 242 tpl~~A~~~~~~~~~~~Ll~~ga~~ 266 (497)
T 3lvq_E 242 TALDIARKKHHKECEELLEQAQAGT 266 (497)
T ss_dssp CHHHHHHHTTCHHHHHHHHHTCC--
T ss_pred CHHHHHHHcCCHHHHHHHHHhCCCC
Confidence 9999999999999999999999887
No 114
>3jue_A Arfgap with coiled-coil, ANK repeat and PH domain containing protein 1; arfgap domain, zinc-binding module, GTPase activ metal-binding, nitration; 2.30A {Homo sapiens} PDB: 3t9k_A 4f1p_A
Probab=99.77 E-value=1.8e-18 Score=129.61 Aligned_cols=132 Identities=16% Similarity=0.060 Sum_probs=89.0
Q ss_pred cCCCHHHHHHHHcCCcHHHHHHHHHhcccccccCCCCchhHHHHhhhhhhhhHHHHHHHHHhhccccccccccCCCcHHH
Q 041785 23 SQMDPNLFKAAADGSVEPFKDMAREVIESSLTVHTKNTILHINIICQETENASTKFVEEILEICPALLLQVNAKGDTPLH 102 (181)
Q Consensus 23 ~~~~t~l~~a~~~g~~~~~~~ll~~~~~~~~~~~~g~t~Lh~a~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~g~t~L~ 102 (181)
..|.||||+|+..|+.+++++|++.|++++..|..|.||||+| +..++.+++++|++. +++++.+|..|.||||
T Consensus 233 ~~g~TpLh~Aa~~g~~~iv~~LL~~Gadvn~~d~~G~TpLh~A--~~~g~~~~v~~LL~~----Gad~~~~d~~G~TpL~ 306 (368)
T 3jue_A 233 QDNATPLIQATAANSLLACEFLLQNGANVNQADSAGRGPLHHA--TILGHTGLACLFLKR----GADLGARDSEGRDPLT 306 (368)
T ss_dssp TTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHH--HHHTCHHHHHHHHHT----TCCTTCCCTTSCCHHH
T ss_pred cCCCCHHHHHHHCCCHHHHHHHHHcCCCCCCCCCCCCCHHHHH--HHcCcHHHHHHHHHC----cCCCCCcCCCCCCHHH
Confidence 5689999999999999999999999999999999999999999 999999999999997 9999999999999999
Q ss_pred HHHHcCCHHHHHHHHHhhhhccCCCCCCcchHHHHHHHhhcccCCCchHHHHHHHcCC--HHHHHHHHHcCCCCC
Q 041785 103 LAAKYSHFDIVRVLIERAQLAQHGDEEPESGIEAFRQMIRMVNNEKNTALHEAVSHGN--VEVVKILTREDPDYP 175 (181)
Q Consensus 103 ~a~~~~~~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~t~l~~A~~~~~--~~~~~~Ll~~g~~~~ 175 (181)
+|+..++.+++++|+..+.... .....+..+.|+++++..... .+-.+.|..++.+++
T Consensus 307 ~A~~~g~~~iv~lLl~~~~~~~---------------~~~~~~~~~~t~l~i~~~~~~~~~~~~ekl~r~~~~~~ 366 (368)
T 3jue_A 307 IAMETANADIVTLLRLAKMREA---------------EAAQGQAGDETYLDIFRDFSLMASDDPEKLSRRSHDLH 366 (368)
T ss_dssp HHHHTTCHHHHHHHHHHHC--------------------------------------------------------
T ss_pred HHHHCCCHHHHHHHHHcCCCcc---------------cccccCCCCCCHHHHHHHHHhhcCCCHHHHHhcCCCcC
Confidence 9999999999999998874320 012345667888887766542 234556666666554
No 115
>1gp8_A Protein (scaffolding protein); coat protein-binding domain, helix- loop-helix motif, viral protein; NMR {Enterobacteria phage P22} SCOP: j.58.1.1 PDB: 2gp8_A
Probab=45.06 E-value=21 Score=16.90 Aligned_cols=17 Identities=35% Similarity=0.548 Sum_probs=14.3
Q ss_pred HHHHHHcCCHHHHHHHH
Q 041785 152 LHEAVSHGNVEVVKILT 168 (181)
Q Consensus 152 l~~A~~~~~~~~~~~Ll 168 (181)
+..||..|+.+.++.|-
T Consensus 17 iyvA~seGd~etv~~Le 33 (40)
T 1gp8_A 17 MDAAASKGDVETYRKLK 33 (40)
T ss_dssp HHHHHTTSCHHHHHHHH
T ss_pred HHHHHhcCCHHHHHHHH
Confidence 56889999999998874
No 116
>4g26_A Pentatricopeptide repeat-containing protein AT2G3 mitochondrial; metallonuclease, prorp, ribonuclease, PIN, tRNA processing, NYN domain; 1.75A {Arabidopsis thaliana} PDB: 4g23_A* 4g25_A 4g24_A
Probab=24.71 E-value=1.5e+02 Score=22.79 Aligned_cols=87 Identities=16% Similarity=0.091 Sum_probs=50.0
Q ss_pred HHHHHHHHcCCcHHHHHHHH----HhcccccccCCCCchhHHHHhhhhhhhhHHHHHHHHHhhccccccccccCCCcHHH
Q 041785 27 PNLFKAAADGSVEPFKDMAR----EVIESSLTVHTKNTILHINIICQETENASTKFVEEILEICPALLLQVNAKGDTPLH 102 (181)
Q Consensus 27 t~l~~a~~~g~~~~~~~ll~----~~~~~~~~~~~g~t~Lh~a~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~g~t~L~ 102 (181)
+.+...+..|+++....+++ .|..++.. ...+.|... ++.|..+-...+...+...|...+.... .+.+.
T Consensus 110 ~lI~~~~~~g~~~~A~~l~~~M~~~g~~Pd~~--tyn~lI~~~--~~~g~~~~A~~l~~~M~~~G~~Pd~~ty--~~Li~ 183 (501)
T 4g26_A 110 NGARLAVAKDDPEMAFDMVKQMKAFGIQPRLR--SYGPALFGF--CRKGDADKAYEVDAHMVESEVVPEEPEL--AALLK 183 (501)
T ss_dssp HHHHHHHHHTCHHHHHHHHHHHHHTTCCCCHH--HHHHHHHHH--HHTTCHHHHHHHHHHHHHTTCCCCHHHH--HHHHH
T ss_pred HHHHHHHhcCCHHHHHHHHHHHHHcCCCCccc--eehHHHHHH--HHCCCHHHHHHHHHHHHhcCCCCCHHHH--HHHHH
Confidence 44556667788876666665 44444321 223445555 7888877777776666555654433222 23445
Q ss_pred HHHHcCCHHHHHHHHHh
Q 041785 103 LAAKYSHFDIVRVLIER 119 (181)
Q Consensus 103 ~a~~~~~~~~~~~L~~~ 119 (181)
..+..|+.+-+.-+++.
T Consensus 184 ~~~~~g~~d~A~~ll~~ 200 (501)
T 4g26_A 184 VSMDTKNADKVYKTLQR 200 (501)
T ss_dssp HHHHTTCHHHHHHHHHH
T ss_pred HHhhCCCHHHHHHHHHH
Confidence 56778887655544443
No 117
>3mkq_B Coatomer subunit alpha; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae}
Probab=20.66 E-value=1.9e+02 Score=18.97 Aligned_cols=21 Identities=19% Similarity=0.123 Sum_probs=15.2
Q ss_pred CHHHHHHHHcCCcHHHHHHHH
Q 041785 26 DPNLFKAAADGSVEPFKDMAR 46 (181)
Q Consensus 26 ~t~l~~a~~~g~~~~~~~ll~ 46 (181)
++-|-.|+..|+++....+..
T Consensus 9 ~~rF~LAL~lg~l~~A~e~a~ 29 (177)
T 3mkq_B 9 HIRFDLALEYGNLDAALDEAK 29 (177)
T ss_dssp HHHHHHHHHTTCHHHHHHHHH
T ss_pred HHHHHHHHhcCCHHHHHHHHH
Confidence 355778888888887776665
Done!