BLASTP 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.


Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 041791
         (421 letters)

Database: pdbaa 
           62,578 sequences; 14,973,337 total letters

Searching..................................................done



>pdb|3FIJ|A Chain A, Crystal Structure Of A Uncharacterized Protein Lin1909
 pdb|3FIJ|B Chain B, Crystal Structure Of A Uncharacterized Protein Lin1909
 pdb|3FIJ|C Chain C, Crystal Structure Of A Uncharacterized Protein Lin1909
 pdb|3FIJ|D Chain D, Crystal Structure Of A Uncharacterized Protein Lin1909
 pdb|3FIJ|E Chain E, Crystal Structure Of A Uncharacterized Protein Lin1909
 pdb|3FIJ|F Chain F, Crystal Structure Of A Uncharacterized Protein Lin1909
 pdb|3FIJ|G Chain G, Crystal Structure Of A Uncharacterized Protein Lin1909
 pdb|3FIJ|H Chain H, Crystal Structure Of A Uncharacterized Protein Lin1909
          Length = 254

 Score = 92.0 bits (227), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 74/241 (30%), Positives = 109/241 (45%), Gaps = 41/241 (17%)

Query: 27  VDFVGEYHLDLIVSYGAVPVIVPRVTGVHMLLESFEPIHGVLLCEGEDIDPSLYDAELSG 86
           V +  + ++D I   G  P+ +P +      +++   + G+LL  G+DI P LY  E S 
Sbjct: 26  VTYTQQRYVDAIQKVGGFPIALP-IDDPSTAVQAISLVDGLLLTGGQDITPQLYLEEPS- 83

Query: 87  FAPEELEEIRALHASDTAIDKEKDTIELRLAKLCLERNIPYLGICRGSQVLNVACGGTLY 146
                 +EI A           +D+ E+ L +  L+   P   ICRG Q++NVA GGTLY
Sbjct: 84  ------QEIGAYFPP-------RDSYEIALVRAALDAGKPIFAICRGXQLVNVALGGTLY 130

Query: 147 QDIEKEISKNCSLGQRVVHMNYENYDGHRHLVKVVEDTPLHQWFRDSLEENKMEIMVNSY 206
           QDI +  +K     QRV     E    H   ++   +   H         NK   +VNS 
Sbjct: 131 QDISQVETKALQHLQRV----DEQLGSHTIDIEPTSELAKHH-------PNKK--LVNSL 177

Query: 207 HHQGVKKLAQRFVPMAFASDGLIEGFYDPDAYNPQEG----KFIMGLQFHPERMRNQDSD 262
           HHQ +KKLA  F   A  +DG IE           EG     + +G+Q+HPE     D +
Sbjct: 178 HHQFIKKLAPSFKVTARTADGXIEAV---------EGDNLPSWYLGVQWHPELXFQTDPE 228

Query: 263 N 263
           +
Sbjct: 229 S 229


>pdb|3UOW|A Chain A, Crystal Structure Of Pf10_0123, A Gmp Synthetase From
           Plasmodium Falciparum
 pdb|3UOW|B Chain B, Crystal Structure Of Pf10_0123, A Gmp Synthetase From
           Plasmodium Falciparum
          Length = 556

 Score = 39.3 bits (90), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 60/258 (23%), Positives = 112/258 (43%), Gaps = 43/258 (16%)

Query: 32  EYHLDLIVSYGA--VPVIVPRVTGVHMLLESFEPIHGVLLCEGEDIDPSLYDAELSGFAP 89
           EY   L++++G+    +IV R+  + +  E+ +  +GV L + +D++  +    LSG  P
Sbjct: 6   EYDKILVLNFGSQYFHLIVKRLNNIKIFSETKD--YGVELKDIKDMN--IKGVILSG-GP 60

Query: 90  EELEEIRALHASDTAIDKEKDTIELRLAKLCLERNIPYLGICRGSQVLNVACGGTLYQDI 149
             + E  + H        +K+  E       LE+ IP  GIC G Q + V   G + +  
Sbjct: 61  YSVTEAGSPHL-------KKEVFEY-----FLEKKIPIFGICYGMQEIAVQMNGEVKKSK 108

Query: 150 EKEISKNCSLGQRVVHMNYENYDGHRHLVKVVEDTPLHQWFR---------DSLEENKME 200
             E    C+    + + N  N    R+         L+  ++         ++++ +   
Sbjct: 109 TSEYG--CTDVNILRNDNINNITYCRNFGDSSSAMDLYSNYKLMNETCCLFENIKSDITT 166

Query: 201 IMVNSYHHQGVKKLAQRFVPMAFASDGLIEGFYDPDAYNPQEGKFIMGLQFHPERMRNQD 260
           + +N  H+  V K+ + F  ++ + + LI   Y+ + YN      I G+Q+HPE   + D
Sbjct: 167 VWMN--HNDEVTKIPENFYLVSSSENCLICSIYNKE-YN------IYGVQYHPEVYESLD 217

Query: 261 SD----NFDYPGCKSAYQ 274
            +    NF Y  CK   Q
Sbjct: 218 GELMFYNFAYNICKCKKQ 235


>pdb|1GPM|A Chain A, Escherichia Coli Gmp Synthetase Complexed With Amp And
           Pyrophosphate
 pdb|1GPM|B Chain B, Escherichia Coli Gmp Synthetase Complexed With Amp And
           Pyrophosphate
 pdb|1GPM|C Chain C, Escherichia Coli Gmp Synthetase Complexed With Amp And
           Pyrophosphate
 pdb|1GPM|D Chain D, Escherichia Coli Gmp Synthetase Complexed With Amp And
           Pyrophosphate
          Length = 525

 Score = 35.8 bits (81), Expect = 0.046,   Method: Compositional matrix adjust.
 Identities = 34/141 (24%), Positives = 53/141 (37%), Gaps = 28/141 (19%)

Query: 115 RLAKLCLERNIPYLGICRGSQVLNVACGGTLYQDIEKEISKNCSLGQRVVHMNYENYDGH 174
           R  +   E  +P  G+C G Q + +  GG +    E+E                    G+
Sbjct: 70  RAPQYVFEAGVPVFGVCYGMQTMAMQLGGHVEASNEREF-------------------GY 110

Query: 175 RHLVKVVEDTPLHQWFRDSLEENKMEIM-VNSYHHQGVKKLAQRFVPMAFASDGLIEGFY 233
              V+VV D+ L +   D+L  +   ++ V   H   V  +   F+ +A           
Sbjct: 111 AQ-VEVVNDSALVRGIEDALTADGKPLLDVWMSHGDKVTAIPSDFITVASTESC------ 163

Query: 234 DPDAYNPQEGKFIMGLQFHPE 254
            P A    E K   G+QFHPE
Sbjct: 164 -PFAIMANEEKRFYGVQFHPE 183


>pdb|1VCM|A Chain A, Crystal Structure Of T.Th. Hb8 Ctp Synthetase
 pdb|1VCN|A Chain A, Crystal Structure Of T.th. Hb8 Ctp Synthetase Complex With
           Sulfate Anion
          Length = 550

 Score = 35.4 bits (80), Expect = 0.062,   Method: Compositional matrix adjust.
 Identities = 47/191 (24%), Positives = 81/191 (42%), Gaps = 31/191 (16%)

Query: 113 ELRLAKLCLERNIPYLGICRGSQVL------NVA-CGGTLYQDIEKEISKNCSLGQRVVH 165
           ++R A+   ER IPYLGIC G Q+       NVA   G    + +   + +  +      
Sbjct: 373 KVRAAQYARERKIPYLGICLGLQIAVIEFARNVAGLKGANSTEFDPH-TPHPVIDLMPEQ 431

Query: 166 MNYENYDGHRHL----VKVVEDTPLHQWF--RDSLEENKMEIMVNSYHHQGVKK---LAQ 216
           +  E   G   L    +++   T LH+ +   + LE ++    VN  +  G+++   +  
Sbjct: 432 LEVEGLGGTMRLGDWPMRIKPGTLLHRLYGKEEVLERHRHRYEVNPLYVDGLERAGLVVS 491

Query: 217 RFVP-MAFASDGLIEGFYDPDAYNPQEGKFIMGLQFHPERMRNQDSDNFDYPGCKSAYQE 275
              P M     GL+E      A   ++  F +GLQ HPE        +  + G       
Sbjct: 492 ATTPGMRGRGAGLVE------AIELKDHPFFLGLQSHPEFKSRPMRPSPPFVG------- 538

Query: 276 FVKAVIAYEKK 286
           FV+A +AY+++
Sbjct: 539 FVEAALAYQER 549


>pdb|1VCO|A Chain A, Crystal Structure Of T.Th. Hb8 Ctp Synthetase Complex With
           Glutamine
          Length = 550

 Score = 35.4 bits (80), Expect = 0.068,   Method: Compositional matrix adjust.
 Identities = 47/191 (24%), Positives = 81/191 (42%), Gaps = 31/191 (16%)

Query: 113 ELRLAKLCLERNIPYLGICRGSQVL------NVA-CGGTLYQDIEKEISKNCSLGQRVVH 165
           ++R A+   ER IPYLGIC G Q+       NVA   G    + +   + +  +      
Sbjct: 373 KVRAAQYARERKIPYLGICLGLQIAVIEFARNVAGLKGANSTEFDPH-TPHPVIDLMPEQ 431

Query: 166 MNYENYDGHRHL----VKVVEDTPLHQWF--RDSLEENKMEIMVNSYHHQGVKK---LAQ 216
           +  E   G   L    +++   T LH+ +   + LE ++    VN  +  G+++   +  
Sbjct: 432 LEVEGLGGTMRLGDWPMRIKPGTLLHRLYGKEEVLERHRHRYEVNPLYVDGLERAGLVVS 491

Query: 217 RFVP-MAFASDGLIEGFYDPDAYNPQEGKFIMGLQFHPERMRNQDSDNFDYPGCKSAYQE 275
              P M     GL+E      A   ++  F +GLQ HPE        +  + G       
Sbjct: 492 ATTPGMRGRGAGLVE------AIELKDHPFFLGLQSHPEFKSRPMRPSPPFVG------- 538

Query: 276 FVKAVIAYEKK 286
           FV+A +AY+++
Sbjct: 539 FVEAALAYQER 549


>pdb|2A9V|A Chain A, Crystal Structure Of A Putative Gmp Synthase Subunit A
           Protein (Ta0944m) From Thermoplasma Acidophilum At 2.45
           A Resolution
 pdb|2A9V|B Chain B, Crystal Structure Of A Putative Gmp Synthase Subunit A
           Protein (Ta0944m) From Thermoplasma Acidophilum At 2.45
           A Resolution
 pdb|2A9V|C Chain C, Crystal Structure Of A Putative Gmp Synthase Subunit A
           Protein (Ta0944m) From Thermoplasma Acidophilum At 2.45
           A Resolution
 pdb|2A9V|D Chain D, Crystal Structure Of A Putative Gmp Synthase Subunit A
           Protein (Ta0944m) From Thermoplasma Acidophilum At 2.45
           A Resolution
          Length = 212

 Score = 34.7 bits (78), Expect = 0.097,   Method: Compositional matrix adjust.
 Identities = 52/211 (24%), Positives = 79/211 (37%), Gaps = 55/211 (26%)

Query: 74  DIDPSLYDA----ELSGFAPEELEEIRALHASDTAIDKEKDTIELRLAKLCLERNIPYLG 129
           DID S  D      LSG AP   EE+  L +    ID               + N P LG
Sbjct: 46  DIDSSELDGLDGLVLSGGAPNIDEELDKLGSVGKYID---------------DHNYPILG 90

Query: 130 ICRGSQVLNVACGGTLYQDIEKEISKNCSLGQRVVHMNYENYDGHRHLVKVVEDTPLHQW 189
           IC G+Q + +  G ++ +      +K+   G+  V +         H   +    P    
Sbjct: 91  ICVGAQFIALHFGASVVK------AKHPEFGKTKVSV--------XHSENIFGGLP---- 132

Query: 190 FRDSLEENKMEIMVNSYHHQGVKKLAQRFVPMAFASDGLIEGFYDPDAYNPQEGKFIMGL 249
                     EI V   H+  +  L   F   A ++   ++GFY        + + I   
Sbjct: 133 ---------SEITVWENHNDEIINLPDDFTLAASSATCQVQGFY-------HKTRPIYAT 176

Query: 250 QFHPERMRNQ-DSDNF-DYPGCKSAYQEFVK 278
           QFHPE    Q   D F ++ G  ++Y+E  K
Sbjct: 177 QFHPEVEHTQYGRDIFRNFIGICASYREIQK 207


>pdb|4APM|A Chain A, Crystal Structure Of Ama1 From Babesia Divergens
          Length = 437

 Score = 34.3 bits (77), Expect = 0.13,   Method: Compositional matrix adjust.
 Identities = 43/151 (28%), Positives = 64/151 (42%), Gaps = 33/151 (21%)

Query: 91  ELEEIRAL----HASDTAIDKEKDTI-ELRLAKLCLERNIPYLGICRGSQVLNVACGGTL 145
           + EE  AL     A+D  ID+E D   EL+     L RNI      + S++        L
Sbjct: 248 DAEECSALMFENAAADLEIDEEADNFDELKTLSDGL-RNI------KASKIAQA-----L 295

Query: 146 YQDIEKEISKNCSLGQRVVHMNYENYDGHRHLVKVVEDTPLHQWFRDSLEENKMEIMVNS 205
           +  I K  +   +   + V MN+ NYD +  L +V+E+TP           N + I   S
Sbjct: 296 FSPIAK--AGTSAKNSKGVGMNWANYDSNTGLCRVIEETP-----------NCLIIDAGS 342

Query: 206 YHHQGV-KKLAQRFVPMAFASDGLIEGFYDP 235
           +    V   L Q  VP  F  D +  G+ +P
Sbjct: 343 FAMTAVGSPLEQDAVP--FPCDIVTNGYIEP 371


>pdb|1O1Y|A Chain A, Crystal Structure Of A Glutamine Amidotransferase (tm1158)
           From Thermotoga Maritima At 1.70 A Resolution
          Length = 239

 Score = 32.3 bits (72), Expect = 0.49,   Method: Compositional matrix adjust.
 Identities = 14/35 (40%), Positives = 22/35 (62%)

Query: 113 ELRLAKLCLERNIPYLGICRGSQVLNVACGGTLYQ 147
           E +L +  L++ IP+LGI  GSQ L    G ++Y+
Sbjct: 82  EFQLIEEILKKEIPFLGIXLGSQXLAKVLGASVYR 116


>pdb|2VXO|A Chain A, Human Gmp Synthetase In Complex With Xmp
 pdb|2VXO|B Chain B, Human Gmp Synthetase In Complex With Xmp
          Length = 697

 Score = 32.3 bits (72), Expect = 0.57,   Method: Compositional matrix adjust.
 Identities = 39/161 (24%), Positives = 61/161 (37%), Gaps = 55/161 (34%)

Query: 126 PYLGICRGSQVLNVACGGTLYQDIEKE-------ISKNCSLGQRVVHMNYENYDGHRHLV 178
           P LGIC G Q++N   GGT+++   +E       +   CSL                   
Sbjct: 103 PVLGICYGMQMMNKVFGGTVHKKSVREDGVFNISVDNTCSL------------------- 143

Query: 179 KVVEDTPLHQWFRDSLEENKMEIMVNSYHHQGVKKLAQRFVPMAFASDGLIEGFYDPDAY 238
                      FR  L++ ++ ++    H   V K+A  F  +A  S  ++ G  +    
Sbjct: 144 -----------FR-GLQKEEVVLLT---HGDSVDKVADGFKVVA-RSGNIVAGIAN---- 183

Query: 239 NPQEGKFIMGLQFHPERMRNQDS----DNF--DYPGCKSAY 273
              E K + G QFHPE    ++      NF  D  GC   +
Sbjct: 184 ---ESKKLYGAQFHPEVGLTENGKVILKNFLYDIAGCSGTF 221


>pdb|1S1M|A Chain A, Crystal Structure Of E. Coli Ctp Synthetase
 pdb|1S1M|B Chain B, Crystal Structure Of E. Coli Ctp Synthetase
 pdb|2AD5|A Chain A, Mechanisms Of Feedback Regulation And Drug Resistance Of
           Ctp Synthetases: Structure Of The E. Coli Ctps/ctp
           Complex At 2.8- Angstrom Resolution.
 pdb|2AD5|B Chain B, Mechanisms Of Feedback Regulation And Drug Resistance Of
           Ctp Synthetases: Structure Of The E. Coli Ctps/ctp
           Complex At 2.8- Angstrom Resolution
          Length = 545

 Score = 32.0 bits (71), Expect = 0.72,   Method: Compositional matrix adjust.
 Identities = 13/23 (56%), Positives = 15/23 (65%)

Query: 114 LRLAKLCLERNIPYLGICRGSQV 136
           +  A+   E NIPYLGIC G QV
Sbjct: 362 ITTARFARENNIPYLGICLGMQV 384


>pdb|2VPI|A Chain A, Human Gmp Synthetase - Glutaminase Domain
 pdb|2VPI|B Chain B, Human Gmp Synthetase - Glutaminase Domain
          Length = 218

 Score = 31.6 bits (70), Expect = 0.80,   Method: Compositional matrix adjust.
 Identities = 39/161 (24%), Positives = 61/161 (37%), Gaps = 55/161 (34%)

Query: 126 PYLGICRGSQVLNVACGGTLYQDIEKE-------ISKNCSLGQRVVHMNYENYDGHRHLV 178
           P LGIC G Q++N   GGT+++   +E       +   CSL                   
Sbjct: 98  PVLGICYGMQMMNKVFGGTVHKKSVREDGVFNISVDNTCSL------------------- 138

Query: 179 KVVEDTPLHQWFRDSLEENKMEIMVNSYHHQGVKKLAQRFVPMAFASDGLIEGFYDPDAY 238
                      FR  L++ ++ ++    H   V K+A  F  +A  S  ++ G  +    
Sbjct: 139 -----------FR-GLQKEEVVLLT---HGDSVDKVADGFKVVA-RSGNIVAGIAN---- 178

Query: 239 NPQEGKFIMGLQFHPERMRNQDS----DNF--DYPGCKSAY 273
              E K + G QFHPE    ++      NF  D  GC   +
Sbjct: 179 ---ESKKLYGAQFHPEVGLTENGKVILKNFLYDIAGCSGTF 216


>pdb|1E7K|A Chain A, Crystal Structure Of The Spliceosomal 15.5kd Protein Bound
           To A U4 Snrna Fragment
 pdb|1E7K|B Chain B, Crystal Structure Of The Spliceosomal 15.5kd Protein Bound
           To A U4 Snrna Fragment
          Length = 128

 Score = 31.2 bits (69), Expect = 1.1,   Method: Compositional matrix adjust.
 Identities = 17/39 (43%), Positives = 22/39 (56%), Gaps = 1/39 (2%)

Query: 104 AIDKEKDTIELRLAKLCLERNIPYLGICRGSQVLNVACG 142
           A D E   I L L  LC ++N+PY+ + R  Q L  ACG
Sbjct: 57  AADAEPLEIILHLPLLCEDKNVPYVFV-RSKQALGRACG 94


>pdb|2OZB|A Chain A, Structure Of A Human Prp31-15.5k-U4 Snrna Complex
 pdb|2OZB|D Chain D, Structure Of A Human Prp31-15.5k-U4 Snrna Complex
 pdb|3SIU|A Chain A, Structure Of A Hprp31-15.5k-U4atac 5' Stem Loop Complex,
           Monomeric Form
 pdb|3SIU|D Chain D, Structure Of A Hprp31-15.5k-U4atac 5' Stem Loop Complex,
           Monomeric Form
 pdb|3SIV|A Chain A, Structure Of A Hprp31-15.5k-U4atac 5' Stem Loop Complex,
           Dimeric Form
 pdb|3SIV|D Chain D, Structure Of A Hprp31-15.5k-U4atac 5' Stem Loop Complex,
           Dimeric Form
 pdb|3SIV|G Chain G, Structure Of A Hprp31-15.5k-U4atac 5' Stem Loop Complex,
           Dimeric Form
 pdb|3SIV|J Chain J, Structure Of A Hprp31-15.5k-U4atac 5' Stem Loop Complex,
           Dimeric Form
          Length = 130

 Score = 31.2 bits (69), Expect = 1.1,   Method: Compositional matrix adjust.
 Identities = 17/39 (43%), Positives = 22/39 (56%), Gaps = 1/39 (2%)

Query: 104 AIDKEKDTIELRLAKLCLERNIPYLGICRGSQVLNVACG 142
           A D E   I L L  LC ++N+PY+ + R  Q L  ACG
Sbjct: 59  AADAEPLEIILHLPLLCEDKNVPYVFV-RSKQALGRACG 96


>pdb|2JNB|A Chain A, Solution Structure Of Rna-Binding Protein 15.5k
          Length = 144

 Score = 31.2 bits (69), Expect = 1.2,   Method: Compositional matrix adjust.
 Identities = 17/39 (43%), Positives = 22/39 (56%), Gaps = 1/39 (2%)

Query: 104 AIDKEKDTIELRLAKLCLERNIPYLGICRGSQVLNVACG 142
           A D E   I L L  LC ++N+PY+ + R  Q L  ACG
Sbjct: 73  AADAEPLEIILHLPLLCEDKNVPYVFV-RSKQALGRACG 110


>pdb|1KA9|H Chain H, Imidazole Glycerol Phosphate Synthase
          Length = 200

 Score = 30.8 bits (68), Expect = 1.6,   Method: Compositional matrix adjust.
 Identities = 12/17 (70%), Positives = 14/17 (82%)

Query: 121 LERNIPYLGICRGSQVL 137
           LER +P+LGIC G QVL
Sbjct: 72  LERGLPFLGICVGMQVL 88


>pdb|1T36|B Chain B, Crystal Structure Of E. Coli Carbamoyl Phosphate
           Synthetase Small Subunit Mutant C248d Complexed With
           Uridine 5'-Monophosphate
 pdb|1T36|D Chain D, Crystal Structure Of E. Coli Carbamoyl Phosphate
           Synthetase Small Subunit Mutant C248d Complexed With
           Uridine 5'-Monophosphate
 pdb|1T36|F Chain F, Crystal Structure Of E. Coli Carbamoyl Phosphate
           Synthetase Small Subunit Mutant C248d Complexed With
           Uridine 5'-Monophosphate
 pdb|1T36|H Chain H, Crystal Structure Of E. Coli Carbamoyl Phosphate
           Synthetase Small Subunit Mutant C248d Complexed With
           Uridine 5'-Monophosphate
          Length = 382

 Score = 30.4 bits (67), Expect = 1.7,   Method: Compositional matrix adjust.
 Identities = 14/37 (37%), Positives = 19/37 (51%)

Query: 106 DKEKDTIELRLAKLCLERNIPYLGICRGSQVLNVACG 142
           D   D   +   +  LE +IP  GIC G Q+L +A G
Sbjct: 244 DPAPDDYAITAIQKFLETDIPVFGICLGHQLLALASG 280


>pdb|2VXX|A Chain A, X-Ray Structure Of Dpsa From Thermosynechococcus Elongatus
 pdb|2VXX|B Chain B, X-Ray Structure Of Dpsa From Thermosynechococcus Elongatus
 pdb|2VXX|C Chain C, X-Ray Structure Of Dpsa From Thermosynechococcus Elongatus
 pdb|2VXX|D Chain D, X-Ray Structure Of Dpsa From Thermosynechococcus Elongatus
          Length = 192

 Score = 29.3 bits (64), Expect = 4.1,   Method: Compositional matrix adjust.
 Identities = 12/29 (41%), Positives = 17/29 (58%)

Query: 168 YENYDGHRHLVKVVEDTPLHQWFRDSLEE 196
           Y  Y  H  +V+  E  PLHQ+F+D  E+
Sbjct: 44  YLQYQKHHFVVEGAEFYPLHQFFQDCYEQ 72


  Database: pdbaa
    Posted date:  Mar 3, 2013 10:34 PM
  Number of letters in database: 14,973,337
  Number of sequences in database:  62,578
  
Lambda     K      H
   0.319    0.136    0.388 

Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 12,402,974
Number of Sequences: 62578
Number of extensions: 522255
Number of successful extensions: 1308
Number of sequences better than 100.0: 20
Number of HSP's better than 100.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 8
Number of HSP's that attempted gapping in prelim test: 1289
Number of HSP's gapped (non-prelim): 22
length of query: 421
length of database: 14,973,337
effective HSP length: 101
effective length of query: 320
effective length of database: 8,652,959
effective search space: 2768946880
effective search space used: 2768946880
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 53 (25.0 bits)