Query         041793
Match_columns 224
No_of_seqs    146 out of 1673
Neff          10.0
Searched_HMMs 46136
Date          Fri Mar 29 10:43:00 2013
Command       hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/041793.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/041793hhsearch_cdd -cpu 12 -v 0 

 No Hit                             Prob E-value P-value  Score    SS Cols Query HMM  Template HMM
  1 KOG0581 Mitogen-activated prot 100.0 8.5E-34 1.8E-38  223.5  10.0  159    5-177   173-335 (364)
  2 KOG0192 Tyrosine kinase specif 100.0 4.3E-33 9.3E-38  227.2  14.1  166    3-181   135-303 (362)
  3 KOG1187 Serine/threonine prote 100.0 2.4E-32 5.2E-37  223.9  12.8  174    6-181   170-352 (361)
  4 KOG0661 MAPK related serine/th 100.0 1.7E-32 3.7E-37  221.8   7.5  170    2-178   102-292 (538)
  5 KOG0575 Polo-like serine/threo 100.0   4E-32 8.6E-37  225.4   9.6  159    3-177   111-269 (592)
  6 KOG0591 NIMA (never in mitosis 100.0   3E-32 6.6E-37  207.9   7.7  168    2-180   116-284 (375)
  7 KOG0615 Serine/threonine prote 100.0 1.1E-31 2.3E-36  214.0   6.6  161    4-177   270-437 (475)
  8 KOG0197 Tyrosine kinases [Sign 100.0 5.7E-31 1.2E-35  215.8  11.0  165    3-181   296-461 (468)
  9 cd05102 PTKc_VEGFR3 Catalytic  100.0 9.5E-31 2.1E-35  214.2  11.9  166    4-181   168-334 (338)
 10 KOG0593 Predicted protein kina 100.0 4.2E-31   9E-36  203.5   8.1  167    5-176    96-283 (396)
 11 KOG0588 Serine/threonine prote 100.0 7.5E-31 1.6E-35  219.6  10.3  165    3-184   105-272 (786)
 12 KOG0578 p21-activated serine/t 100.0 1.6E-30 3.4E-35  214.4  11.5  159    6-177   365-523 (550)
 13 KOG0198 MEKK and related serin 100.0 4.8E-31   1E-35  209.8   8.1  162    6-178   113-277 (313)
 14 KOG0592 3-phosphoinositide-dep 100.0 1.7E-30 3.8E-35  213.2  11.2  162    3-178   167-339 (604)
 15 KOG0582 Ste20-like serine/thre 100.0 2.5E-30 5.4E-35  208.0  10.0  167    6-176   122-292 (516)
 16 KOG0583 Serine/threonine prote 100.0 3.6E-30 7.7E-35  211.6  11.1  158    4-176   114-274 (370)
 17 KOG0193 Serine/threonine prote 100.0 2.5E-30 5.5E-35  214.6  10.1  169    4-181   482-653 (678)
 18 KOG0600 Cdc2-related protein k 100.0 5.4E-30 1.2E-34  208.7  10.6  169    4-176   212-399 (560)
 19 KOG2345 Serine/threonine prote 100.0 1.1E-29 2.4E-34  190.6  11.0  170    4-181   121-300 (302)
 20 KOG0660 Mitogen-activated prot 100.0 3.7E-30 8.1E-35  202.2   8.8  172    3-177   118-310 (359)
 21 cd05096 PTKc_DDR1 Catalytic do 100.0 5.3E-30 1.2E-34  206.8   9.5  168    5-179   133-303 (304)
 22 cd05106 PTKc_CSF-1R Catalytic  100.0 9.5E-30 2.1E-34  211.0  11.1  166    4-181   206-372 (374)
 23 cd05048 PTKc_Ror Catalytic Dom 100.0 1.1E-29 2.4E-34  202.6  11.0  163    5-180   119-282 (283)
 24 KOG0598 Ribosomal protein S6 k 100.0 3.5E-30 7.5E-35  203.0   7.7  151    3-169   118-269 (357)
 25 cd05054 PTKc_VEGFR Catalytic d 100.0 1.2E-29 2.6E-34  207.7  11.2  165    4-181   167-333 (337)
 26 cd05100 PTKc_FGFR3 Catalytic d 100.0 2.7E-29 5.9E-34  205.3  12.3  168    5-185   129-297 (334)
 27 cd05111 PTK_HER3 Pseudokinase  100.0 1.9E-29   4E-34  201.3  10.8  167    3-182   102-269 (279)
 28 PHA02882 putative serine/threo 100.0 9.1E-30   2E-34  204.7   9.1  167    6-178   122-293 (294)
 29 cd05094 PTKc_TrkC Catalytic do 100.0 1.4E-29 3.1E-34  203.1  10.0  165    4-181   117-282 (291)
 30 cd05108 PTKc_EGFR Catalytic do 100.0 1.5E-29 3.3E-34  205.3  10.2  166    4-182   103-269 (316)
 31 PHA02988 hypothetical protein; 100.0 1.3E-29 2.9E-34  202.7   9.4  161    4-181   116-279 (283)
 32 cd07862 STKc_CDK6 Catalytic do 100.0 1.5E-29 3.3E-34  202.7   9.6  165    4-176   104-286 (290)
 33 cd05075 PTKc_Axl Catalytic dom 100.0   2E-29 4.3E-34  200.1  10.1  165    4-181   106-271 (272)
 34 cd05053 PTKc_FGFR Catalytic do 100.0   3E-29 6.6E-34  201.2  11.3  166    3-181   125-291 (293)
 35 cd05104 PTKc_Kit Catalytic dom 100.0 2.7E-29 5.9E-34  208.4  11.3  166    4-181   208-374 (375)
 36 PHA03207 serine/threonine kina 100.0 1.3E-29 2.8E-34  211.6   9.3  172    3-177   178-375 (392)
 37 KOG0667 Dual-specificity tyros 100.0 2.3E-29 4.9E-34  210.8  10.5  168    2-177   281-502 (586)
 38 KOG0659 Cdk activating kinase  100.0 1.5E-29 3.2E-34  191.7   8.2  171    2-178    93-282 (318)
 39 KOG1989 ARK protein kinase fam 100.0 3.6E-29 7.8E-34  215.4  11.3  162    6-181   140-311 (738)
 40 cd05091 PTKc_Ror2 Catalytic do 100.0 2.3E-29   5E-34  200.9   9.5  164    4-180   118-282 (283)
 41 cd05109 PTKc_HER2 Catalytic do 100.0   3E-29 6.5E-34  200.0  10.0  168    4-184   103-271 (279)
 42 cd05049 PTKc_Trk Catalytic dom 100.0 5.1E-29 1.1E-33  198.5  11.1  163    4-179   116-279 (280)
 43 KOG0585 Ca2+/calmodulin-depend 100.0 1.9E-29 4.2E-34  204.3   8.7  161    5-178   204-373 (576)
 44 KOG0201 Serine/threonine prote 100.0 2.4E-29 5.3E-34  201.8   9.1  159    4-177   105-263 (467)
 45 cd05093 PTKc_TrkB Catalytic do 100.0   4E-29 8.6E-34  200.2  10.2  165    5-182   115-280 (288)
 46 cd05051 PTKc_DDR Catalytic dom 100.0 6.7E-29 1.4E-33  199.4  11.5  170    5-180   125-296 (296)
 47 cd05035 PTKc_Axl_like Catalyti 100.0 9.6E-29 2.1E-33  196.0  12.1  164    5-181   108-272 (273)
 48 cd07848 STKc_CDKL5 Catalytic d 100.0 3.8E-29 8.2E-34  200.1   9.1  169    4-176    94-283 (287)
 49 cd07868 STKc_CDK8 Catalytic do 100.0 5.9E-29 1.3E-33  201.7  10.2  111    5-118   103-219 (317)
 50 PTZ00284 protein kinase; Provi 100.0 1.6E-29 3.6E-34  215.3   7.0  165    4-176   225-437 (467)
 51 PTZ00283 serine/threonine prot 100.0   5E-29 1.1E-33  213.3   9.6  161    4-177   137-297 (496)
 52 PTZ00263 protein kinase A cata 100.0 2.1E-28 4.5E-33  199.8  12.8  155    4-177   112-271 (329)
 53 cd05631 STKc_GRK4 Catalytic do 100.0 1.3E-28 2.8E-33  197.1  11.3  159    4-176    96-260 (285)
 54 cd05032 PTKc_InsR_like Catalyt 100.0 9.8E-29 2.1E-33  196.5  10.6  162    5-179   114-276 (277)
 55 cd05052 PTKc_Abl Catalytic dom 100.0 1.5E-28 3.2E-33  194.4  11.5  164    4-181    98-262 (263)
 56 cd05571 STKc_PKB Catalytic dom 100.0 6.7E-29 1.4E-33  202.2   9.7  157    4-176    89-250 (323)
 57 KOG0671 LAMMER dual specificit 100.0 2.8E-29   6E-34  198.5   6.8  168    2-177   184-406 (415)
 58 cd07859 STKc_TDY_MAPK_plant Ca 100.0 5.9E-29 1.3E-33  203.3   9.0  170    4-177    97-290 (338)
 59 cd05603 STKc_SGK2 Catalytic do 100.0   2E-28 4.3E-33  199.2  11.9  153    4-172    90-242 (321)
 60 PF07714 Pkinase_Tyr:  Protein  100.0 2.3E-29 5.1E-34  198.8   6.0  162    4-178    97-259 (259)
 61 PHA03212 serine/threonine kina 100.0 7.7E-29 1.7E-33  206.6   9.3  109    4-116   176-284 (391)
 62 cd05092 PTKc_TrkA Catalytic do 100.0 1.3E-28 2.9E-33  196.4  10.3  162    5-179   117-279 (280)
 63 cd05600 STKc_Sid2p_Dbf2p Catal 100.0 7.9E-29 1.7E-33  202.5   9.0  163    4-177    95-257 (333)
 64 cd05095 PTKc_DDR2 Catalytic do 100.0 2.3E-28 4.9E-33  196.6  11.3  168    5-180   125-296 (296)
 65 KOG4721 Serine/threonine prote 100.0 6.7E-29 1.4E-33  205.2   8.3  163    3-180   205-367 (904)
 66 cd05101 PTKc_FGFR2 Catalytic d 100.0 1.2E-28 2.5E-33  199.0   9.5  167    5-184   132-299 (304)
 67 cd05116 PTKc_Syk Catalytic dom 100.0 1.4E-28 2.9E-33  193.9   9.5  164    4-180    89-254 (257)
 68 cd05045 PTKc_RET Catalytic dom 100.0 1.6E-28 3.5E-33  196.8  10.0  165    4-181   121-286 (290)
 69 KOG0663 Protein kinase PITSLRE 100.0 3.1E-28 6.6E-33  189.8  11.1  169    3-176   170-360 (419)
 70 cd05585 STKc_YPK1_like Catalyt 100.0   2E-28 4.4E-33  198.4  10.5  160    4-179    87-246 (312)
 71 KOG1026 Nerve growth factor re 100.0 6.4E-29 1.4E-33  213.3   7.9  167    4-183   597-764 (774)
 72 cd05080 PTKc_Tyk2_rpt2 Catalyt 100.0 1.6E-28 3.5E-33  196.1   9.7  173    5-181   102-281 (283)
 73 cd05084 PTKc_Fes Catalytic dom 100.0 1.1E-28 2.4E-33  193.7   8.6  163    4-179    88-251 (252)
 74 cd00192 PTKc Catalytic domain  100.0 3.3E-28 7.2E-33  191.3  11.2  163    4-179    99-262 (262)
 75 cd07871 STKc_PCTAIRE3 Catalyti 100.0 7.9E-29 1.7E-33  198.6   7.8  168    4-176    97-284 (288)
 76 cd05614 STKc_MSK2_N N-terminal 100.0   2E-28 4.4E-33  200.0  10.2  162    4-177    99-267 (332)
 77 cd05114 PTKc_Tec_Rlk Catalytic 100.0   3E-28 6.5E-33  191.8  10.8  161    5-179    95-256 (256)
 78 cd05601 STKc_CRIK Catalytic do 100.0 3.7E-28 8.1E-33  198.3  11.8  161    5-177    97-263 (330)
 79 cd05592 STKc_nPKC_theta_delta  100.0 9.8E-28 2.1E-32  194.8  14.1  157    4-176    90-247 (316)
 80 PTZ00267 NIMA-related protein  100.0 1.7E-28 3.6E-33  209.6  10.0  160    4-176   163-322 (478)
 81 cd05099 PTKc_FGFR4 Catalytic d 100.0 3.2E-28   7E-33  197.3  11.2  164    5-181   129-293 (314)
 82 cd05593 STKc_PKB_gamma Catalyt 100.0 3.1E-28 6.7E-33  198.7  11.1  158    4-177    89-251 (328)
 83 PHA03211 serine/threonine kina 100.0 2.3E-28 5.1E-33  206.8  10.6  109    4-115   254-362 (461)
 84 cd05620 STKc_nPKC_delta Cataly 100.0 6.6E-28 1.4E-32  195.8  12.8  156    4-175    90-246 (316)
 85 cd05062 PTKc_IGF-1R Catalytic  100.0 2.1E-28 4.5E-33  194.9   9.7  161    6-179   115-276 (277)
 86 cd05033 PTKc_EphR Catalytic do 100.0 3.6E-28 7.9E-33  192.4  11.0  165    4-181   100-265 (266)
 87 cd05097 PTKc_DDR_like Catalyti 100.0 3.1E-28 6.6E-33  195.7  10.8  166    6-179   125-294 (295)
 88 cd05090 PTKc_Ror1 Catalytic do 100.0 2.6E-28 5.5E-33  195.0  10.0  163    5-180   119-282 (283)
 89 KOG0658 Glycogen synthase kina 100.0 8.5E-29 1.8E-33  194.9   6.9  168    4-177   119-306 (364)
 90 cd05618 STKc_aPKC_iota Catalyt 100.0   2E-28 4.2E-33  199.9   9.3  155    4-171    90-250 (329)
 91 cd05072 PTKc_Lyn Catalytic dom 100.0   4E-28 8.6E-33  191.5  10.7  163    4-180    97-260 (261)
 92 cd07863 STKc_CDK4 Catalytic do 100.0 3.4E-28 7.5E-33  194.5  10.5  166    5-176   103-284 (288)
 93 cd05573 STKc_ROCK_NDR_like Cat 100.0 1.8E-28 3.9E-33  201.5   9.0  162    5-177    96-285 (350)
 94 KOG0599 Phosphorylase kinase g 100.0 6.5E-29 1.4E-33  189.3   5.9  159    4-177   117-283 (411)
 95 cd05043 PTK_Ryk Pseudokinase d 100.0 3.1E-28 6.8E-33  194.1   9.9  164    5-181   112-276 (280)
 96 KOG0616 cAMP-dependent protein 100.0 1.5E-28 3.3E-33  188.7   7.6  147    3-168   137-283 (355)
 97 cd05591 STKc_nPKC_epsilon Cata 100.0 3.6E-28 7.9E-33  197.7  10.3  158    4-177    90-254 (321)
 98 cd06649 PKc_MEK2 Catalytic dom 100.0 3.8E-28 8.3E-33  198.4  10.3  107    4-117    97-204 (331)
 99 cd07867 STKc_CDC2L6 Catalytic  100.0 3.2E-28   7E-33  197.3   9.7  111    5-118   103-219 (317)
100 KOG0595 Serine/threonine-prote 100.0 3.4E-28 7.3E-33  193.8   9.5  113    3-121   102-220 (429)
101 cd07874 STKc_JNK3 Catalytic do 100.0 3.6E-28 7.8E-33  200.3  10.1  166    6-177   115-311 (355)
102 cd07875 STKc_JNK1 Catalytic do 100.0 2.1E-28 4.5E-33  202.4   8.7  166    6-177   122-318 (364)
103 cd05590 STKc_nPKC_eta Catalyti 100.0 3.6E-28 7.9E-33  197.6  10.0  152    4-171    90-241 (320)
104 cd07869 STKc_PFTAIRE1 Catalyti 100.0 2.1E-28 4.5E-33  197.5   8.4  168    4-176    97-287 (303)
105 cd07876 STKc_JNK2 Catalytic do 100.0 4.3E-28 9.3E-33  200.1  10.4  167    5-177   118-315 (359)
106 cd05110 PTKc_HER4 Catalytic do 100.0 3.8E-28 8.2E-33  196.0   9.8  165    4-181   103-268 (303)
107 KOG0594 Protein kinase PCTAIRE 100.0 2.6E-28 5.7E-33  191.9   8.6  168    5-177   115-302 (323)
108 cd05617 STKc_aPKC_zeta Catalyt 100.0 3.7E-28 8.1E-33  198.1   9.8  156    4-171    90-248 (327)
109 cd05060 PTKc_Syk_like Catalyti 100.0 5.3E-28 1.2E-32  190.5  10.4  164    5-181    90-255 (257)
110 cd08229 STKc_Nek7 Catalytic do 100.0 6.1E-28 1.3E-32  191.0  10.7  166    4-181   100-265 (267)
111 cd07878 STKc_p38beta_MAPK11 Ca 100.0 3.1E-28 6.7E-33  199.8   9.3  166    4-177   112-298 (343)
112 cd05594 STKc_PKB_alpha Catalyt 100.0 2.3E-28 4.9E-33  199.2   8.4  158    4-177    89-252 (325)
113 cd05068 PTKc_Frk_like Catalyti 100.0 1.2E-27 2.7E-32  188.8  12.3  162    5-180    98-260 (261)
114 cd05612 STKc_PRKX_like Catalyt 100.0 2.4E-28 5.1E-33  196.1   8.3  155    4-177    95-254 (291)
115 cd05070 PTKc_Fyn_Yrk Catalytic 100.0 7.9E-28 1.7E-32  189.8  11.1  163    4-180    96-259 (260)
116 cd05588 STKc_aPKC Catalytic do 100.0 3.4E-28 7.3E-33  198.5   9.3  160    4-176    90-261 (329)
117 cd05050 PTKc_Musk Catalytic do 100.0 5.8E-28 1.3E-32  193.4  10.5  163    5-180   125-288 (288)
118 cd05575 STKc_SGK Catalytic dom 100.0 5.2E-28 1.1E-32  196.9  10.3  153    4-172    90-242 (323)
119 cd05115 PTKc_Zap-70 Catalytic  100.0 3.5E-28 7.6E-33  191.8   9.0  165    3-180    88-254 (257)
120 PTZ00036 glycogen synthase kin 100.0   1E-28 2.2E-33  208.8   6.3  169    3-177   163-351 (440)
121 cd08228 STKc_Nek6 Catalytic do  99.9 4.2E-28 9.1E-33  191.9   9.4  166    4-181   100-265 (267)
122 cd05036 PTKc_ALK_LTK Catalytic  99.9 5.6E-28 1.2E-32  192.5  10.1  162    5-179   111-276 (277)
123 cd05595 STKc_PKB_beta Catalyti  99.9 4.5E-28 9.7E-33  197.3   9.6  157    4-176    89-250 (323)
124 cd05589 STKc_PKN Catalytic dom  99.9 2.1E-27 4.5E-32  193.5  13.5  158    4-177    95-257 (324)
125 PLN00034 mitogen-activated pro  99.9   8E-28 1.7E-32  198.1  11.2  160    6-177   164-328 (353)
126 cd05105 PTKc_PDGFR_alpha Catal  99.9 6.6E-28 1.4E-32  201.4  10.8  166    4-181   231-397 (400)
127 cd07853 STKc_NLK Catalytic dom  99.9 2.5E-28 5.4E-33  202.5   8.1  170    4-177    97-288 (372)
128 cd05148 PTKc_Srm_Brk Catalytic  99.9   4E-28 8.7E-33  191.4   8.9  163    3-180    97-260 (261)
129 cd05082 PTKc_Csk Catalytic dom  99.9 7.3E-28 1.6E-32  189.6  10.3  158    5-180    97-255 (256)
130 cd05570 STKc_PKC Catalytic dom  99.9 4.5E-28 9.8E-33  196.9   9.3  158    4-177    90-252 (318)
131 cd05608 STKc_GRK1 Catalytic do  99.9 8.6E-28 1.9E-32  191.9  10.8  160    4-176    91-256 (280)
132 cd05113 PTKc_Btk_Bmx Catalytic  99.9 5.6E-28 1.2E-32  190.4   9.5  161    5-179    95-256 (256)
133 cd05069 PTKc_Yes Catalytic dom  99.9 1.3E-27 2.9E-32  188.6  11.4  162    5-180    97-259 (260)
134 cd08224 STKc_Nek6_Nek7 Catalyt  99.9 1.2E-27 2.5E-32  189.2  11.0  167    3-181    99-265 (267)
135 cd05064 PTKc_EphR_A10 Catalyti  99.9 6.3E-28 1.4E-32  191.2   9.5  164    4-181   101-265 (266)
136 cd05074 PTKc_Tyro3 Catalytic d  99.9 8.9E-28 1.9E-32  190.6  10.3  163    6-181   109-272 (273)
137 cd05059 PTKc_Tec_like Catalyti  99.9 6.9E-28 1.5E-32  189.8   9.6  161    4-178    94-255 (256)
138 cd05616 STKc_cPKC_beta Catalyt  99.9 7.3E-28 1.6E-32  196.1   9.9  152    4-171    95-246 (323)
139 cd05098 PTKc_FGFR1 Catalytic d  99.9 4.8E-28   1E-32  195.7   8.8  164    5-181   135-299 (307)
140 KOG4279 Serine/threonine prote  99.9 6.5E-28 1.4E-32  203.3   9.7  162    3-177   666-832 (1226)
141 KOG0611 Predicted serine/threo  99.9 4.1E-28 8.9E-33  193.8   7.8  159    2-178   145-304 (668)
142 cd05044 PTKc_c-ros Catalytic d  99.9 1.5E-27 3.2E-32  189.0  11.0  162    5-179   101-268 (269)
143 cd05089 PTKc_Tie1 Catalytic do  99.9 6.4E-28 1.4E-32  194.1   9.0  163    5-183   114-277 (297)
144 cd05055 PTKc_PDGFR Catalytic d  99.9 1.2E-27 2.6E-32  193.1  10.6  164    5-181   136-301 (302)
145 cd05584 STKc_p70S6K Catalytic   99.9 1.5E-27 3.2E-32  194.2  11.3  157    4-176    94-255 (323)
146 cd05587 STKc_cPKC Catalytic do  99.9   9E-28 1.9E-32  195.6   9.9  152    4-171    95-246 (324)
147 PHA03209 serine/threonine kina  99.9 9.8E-28 2.1E-32  197.9   9.9  107    3-115   150-256 (357)
148 cd05067 PTKc_Lck_Blk Catalytic  99.9 2.2E-27 4.7E-32  187.3  11.4  163    4-180    96-259 (260)
149 cd05619 STKc_nPKC_theta Cataly  99.9 9.1E-28   2E-32  195.0   9.5  157    4-176    90-247 (316)
150 cd05602 STKc_SGK1 Catalytic do  99.9   1E-27 2.2E-32  195.3   9.7  156    4-175    90-245 (325)
151 KOG0596 Dual specificity; seri  99.9 2.9E-28 6.3E-33  200.5   6.3  161    5-177   455-627 (677)
152 cd05077 PTK_Jak1_rpt1 Pseudoki  99.9 1.9E-27 4.1E-32  188.1  10.8  155    4-179    99-262 (262)
153 cd06625 STKc_MEKK3_like Cataly  99.9 1.5E-27 3.2E-32  188.3  10.1  162    4-177    98-260 (263)
154 cd05582 STKc_RSK_N N-terminal   99.9 1.5E-27 3.2E-32  193.8  10.4  154    4-173    92-245 (318)
155 cd06616 PKc_MKK4 Catalytic dom  99.9 8.1E-28 1.8E-32  192.5   8.7  163    4-177   101-267 (288)
156 cd05088 PTKc_Tie2 Catalytic do  99.9 1.4E-27 2.9E-32  192.8  10.1  161    5-181   119-280 (303)
157 cd05063 PTKc_EphR_A2 Catalytic  99.9 1.7E-27 3.6E-32  188.7  10.4  165    4-181   101-267 (268)
158 cd06643 STKc_SLK Catalytic dom  99.9 2.4E-27 5.2E-32  189.3  11.3  161    4-177    97-262 (282)
159 cd05041 PTKc_Fes_like Catalyti  99.9 1.3E-27 2.8E-32  187.5   9.6  163    4-179    87-250 (251)
160 cd05604 STKc_SGK3 Catalytic do  99.9 2.1E-27 4.5E-32  193.5  11.1  155    3-173    89-243 (325)
161 KOG0589 Serine/threonine prote  99.9 3.5E-28 7.6E-33  198.6   6.5  161    2-177    98-258 (426)
162 KOG0033 Ca2+/calmodulin-depend  99.9 1.6E-27 3.5E-32  179.1   9.4  156    7-176   107-266 (355)
163 smart00750 KIND kinase non-cat  99.9 1.6E-27 3.6E-32  177.5   9.5  157    3-180    10-168 (176)
164 cd05103 PTKc_VEGFR2 Catalytic   99.9 2.1E-27 4.6E-32  194.9  10.9  165    5-181   174-339 (343)
165 cd05040 PTKc_Ack_like Catalyti  99.9 1.9E-27 4.2E-32  187.1  10.2  163    5-179    92-256 (257)
166 cd05607 STKc_GRK7 Catalytic do  99.9 1.4E-27 2.9E-32  190.4   9.4  162    4-178    89-251 (277)
167 cd05058 PTKc_Met_Ron Catalytic  99.9 1.7E-27 3.6E-32  188.0   9.9  164    5-181    93-259 (262)
168 cd05057 PTKc_EGFR_like Catalyt  99.9 1.8E-27 3.9E-32  189.7  10.1  165    4-181   103-268 (279)
169 KOG0597 Serine-threonine prote  99.9 4.2E-28 9.1E-33  200.3   6.4  159    3-177    93-251 (808)
170 cd05047 PTKc_Tie Catalytic dom  99.9 1.8E-27 3.8E-32  189.0   9.7  161    5-181   107-268 (270)
171 cd06612 STKc_MST1_2 Catalytic   99.9 2.1E-27 4.5E-32  186.7  10.0  160    4-176    93-252 (256)
172 cd05037 PTK_Jak_rpt1 Pseudokin  99.9 2.5E-27 5.4E-32  186.5  10.5  153    6-179    97-259 (259)
173 cd05087 PTKc_Aatyk1_Aatyk3 Cat  99.9 4.2E-27 9.1E-32  186.6  11.8  165    6-179    96-268 (269)
174 cd05599 STKc_NDR_like Catalyti  99.9   5E-27 1.1E-31  194.1  12.7  163    4-177    95-296 (364)
175 cd05071 PTKc_Src Catalytic dom  99.9 2.5E-27 5.3E-32  187.4  10.3  164    4-181    96-260 (262)
176 cd06637 STKc_TNIK Catalytic do  99.9 2.5E-27 5.4E-32  188.0  10.2  159    4-176   105-268 (272)
177 cd08219 STKc_Nek3 Catalytic do  99.9 1.4E-27 3.1E-32  187.8   8.6  160    3-177    93-252 (255)
178 PTZ00426 cAMP-dependent protei  99.9 1.8E-27   4E-32  195.0   9.6  156    3-177   124-284 (340)
179 KOG0603 Ribosomal protein S6 k  99.9 1.2E-27 2.6E-32  200.0   8.4  147   10-176   415-562 (612)
180 cd08529 STKc_FA2-like Catalyti  99.9 2.9E-27 6.3E-32  185.8  10.1  159    4-177    95-253 (256)
181 cd05586 STKc_Sck1_like Catalyt  99.9 6.6E-28 1.4E-32  196.8   6.5  159    3-176    89-252 (330)
182 cd06619 PKc_MKK5 Catalytic dom  99.9 1.6E-27 3.5E-32  190.1   8.6  162    5-177    90-253 (279)
183 cd06650 PKc_MEK1 Catalytic dom  99.9   3E-27 6.5E-32  193.3  10.2  108    4-118    97-205 (333)
184 cd05065 PTKc_EphR_B Catalytic   99.9 4.9E-27 1.1E-31  186.2  11.0  165    4-181   100-268 (269)
185 cd05085 PTKc_Fer Catalytic dom  99.9 4.7E-27   1E-31  184.2  10.8  162    4-179    87-249 (250)
186 cd08223 STKc_Nek4 Catalytic do  99.9   4E-27 8.7E-32  185.2  10.2  158    4-176    96-253 (257)
187 cd05039 PTKc_Csk_like Catalyti  99.9 4.2E-27 9.1E-32  185.2  10.3  158    5-180    97-255 (256)
188 cd05596 STKc_ROCK Catalytic do  99.9   6E-27 1.3E-31  194.1  11.6  161    5-177   137-304 (370)
189 cd06654 STKc_PAK1 Catalytic do  99.9 3.6E-27 7.8E-32  189.7  10.0  160    5-177   111-270 (296)
190 KOG0694 Serine/threonine prote  99.9 2.5E-27 5.3E-32  199.4   9.2  153    3-171   461-613 (694)
191 cd05073 PTKc_Hck Catalytic dom  99.9 5.2E-27 1.1E-31  185.2  10.7  163    4-180    96-259 (260)
192 PF00069 Pkinase:  Protein kina  99.9 3.7E-28 8.1E-33  191.2   4.1  164    4-176    92-256 (260)
193 PHA03210 serine/threonine kina  99.9   3E-27 6.5E-32  202.8   9.8  166    8-177   265-454 (501)
194 cd05112 PTKc_Itk Catalytic dom  99.9 5.4E-27 1.2E-31  184.5  10.5  162    4-179    94-256 (256)
195 cd06659 STKc_PAK6 Catalytic do  99.9 3.8E-27 8.2E-32  189.7   9.7  160    5-177   112-271 (297)
196 cd07872 STKc_PCTAIRE2 Catalyti  99.9 2.1E-27 4.6E-32  192.1   8.3  166    4-176    98-285 (309)
197 cd05042 PTKc_Aatyk Catalytic d  99.9 4.5E-27 9.8E-32  186.4  10.0  164    6-179    96-268 (269)
198 cd06644 STKc_STK10_LOK Catalyt  99.9   1E-26 2.3E-31  186.5  12.1  160    4-176   104-268 (292)
199 cd05061 PTKc_InsR Catalytic do  99.9 3.4E-27 7.3E-32  189.1   9.2  163    6-181   115-278 (288)
200 cd05078 PTK_Jak2_Jak3_rpt1 Pse  99.9 5.3E-27 1.1E-31  185.0  10.1  155    4-179    94-258 (258)
201 cd05034 PTKc_Src_like Catalyti  99.9 4.5E-27 9.7E-32  185.4   9.7  162    5-180    98-260 (261)
202 cd05083 PTKc_Chk Catalytic dom  99.9 8.8E-27 1.9E-31  183.2  11.3  158    5-180    95-253 (254)
203 cd05056 PTKc_FAK Catalytic dom  99.9 7.4E-27 1.6E-31  185.2  10.9  163    5-181   102-265 (270)
204 cd05605 STKc_GRK4_like Catalyt  99.9   4E-27 8.6E-32  188.5   9.3  160    4-177    96-261 (285)
205 cd05107 PTKc_PDGFR_beta Cataly  99.9 5.8E-27 1.3E-31  195.6  10.6  166    4-181   233-399 (401)
206 cd06646 STKc_MAP4K5 Catalytic   99.9   6E-27 1.3E-31  185.4  10.0  164    4-178   100-266 (267)
207 cd05615 STKc_cPKC_alpha Cataly  99.9 4.9E-27 1.1E-31  191.2   9.7  152    4-171    95-246 (323)
208 cd05081 PTKc_Jak2_Jak3_rpt2 Ca  99.9   3E-27 6.6E-32  188.8   8.0  172    4-181   102-283 (284)
209 cd07865 STKc_CDK9 Catalytic do  99.9 6.6E-27 1.4E-31  188.8   9.8  170    4-176   113-306 (310)
210 cd06658 STKc_PAK5 Catalytic do  99.9 5.4E-27 1.2E-31  188.4   9.2  160    5-177   113-272 (292)
211 cd05086 PTKc_Aatyk2 Catalytic   99.9 1.7E-26 3.7E-31  183.2  11.9  166    5-179    94-267 (268)
212 cd08528 STKc_Nek10 Catalytic d  99.9 1.3E-26 2.7E-31  183.7  11.1  161    4-179   107-268 (269)
213 KOG0604 MAP kinase-activated p  99.9 5.2E-27 1.1E-31  180.7   8.5  165    2-177   153-322 (400)
214 KOG1095 Protein tyrosine kinas  99.9 6.1E-27 1.3E-31  207.5  10.1  165    4-181   796-961 (1025)
215 cd06655 STKc_PAK2 Catalytic do  99.9 7.1E-27 1.5E-31  188.0   9.6  160    5-177   110-269 (296)
216 cd06638 STKc_myosinIIIA Cataly  99.9 2.3E-26 4.9E-31  183.8  12.3  161    4-177   118-283 (286)
217 smart00219 TyrKc Tyrosine kina  99.9 9.8E-27 2.1E-31  182.8  10.0  158    7-178   100-258 (258)
218 cd06645 STKc_MAP4K3 Catalytic   99.9 1.2E-26 2.5E-31  183.7  10.5  162    4-176   100-264 (267)
219 cd06628 STKc_MAPKKK_Byr2_like   99.9 7.9E-27 1.7E-31  184.6   9.5  160    4-176   100-263 (267)
220 cd06639 STKc_myosinIIIB Cataly  99.9 1.5E-26 3.2E-31  185.5  10.9  160    4-176   122-286 (291)
221 cd06617 PKc_MKK3_6 Catalytic d  99.9   2E-26 4.3E-31  183.8  11.6  158    4-176    97-260 (283)
222 cd06651 STKc_MEKK3 Catalytic d  99.9 1.2E-26 2.6E-31  183.7  10.2  160    4-176   100-260 (266)
223 cd05626 STKc_LATS2 Catalytic d  99.9   2E-26 4.3E-31  191.7  12.0  164    4-177    95-305 (381)
224 cd05079 PTKc_Jak1_rpt2 Catalyt  99.9 9.5E-27 2.1E-31  186.0   9.7  167    5-181   104-283 (284)
225 cd05046 PTK_CCK4 Pseudokinase   99.9 1.6E-26 3.5E-31  183.7  10.9  161    6-179   113-274 (275)
226 cd06609 STKc_MST3_like Catalyt  99.9 1.1E-26 2.5E-31  184.6   9.9  158    6-177    94-251 (274)
227 cd07839 STKc_CDK5 Catalytic do  99.9 7.3E-27 1.6E-31  186.5   8.7  168    4-176    93-280 (284)
228 cd05076 PTK_Tyk2_rpt1 Pseudoki  99.9 1.3E-26 2.7E-31  184.6   9.9  155    4-179   111-274 (274)
229 cd06613 STKc_MAP4K3_like Catal  99.9 6.3E-27 1.4E-31  184.5   8.1  162    4-176    95-259 (262)
230 cd07847 STKc_CDKL1_4 Catalytic  99.9 1.7E-26 3.8E-31  184.3  10.8  168    4-176    94-282 (286)
231 cd05066 PTKc_EphR_A Catalytic   99.9 1.3E-26 2.8E-31  183.7   9.8  165    4-181   100-266 (267)
232 cd05038 PTKc_Jak_rpt2 Catalyti  99.9   1E-26 2.3E-31  185.3   9.3  169    6-181   105-283 (284)
233 cd07850 STKc_JNK Catalytic dom  99.9 1.6E-26 3.5E-31  190.4  10.6  166    6-177   114-311 (353)
234 cd07861 STKc_CDK1_euk Catalyti  99.9 7.6E-27 1.7E-31  186.4   8.4  164    4-176    95-281 (285)
235 KOG0605 NDR and related serine  99.9 4.4E-27 9.6E-32  193.0   6.9  163    3-176   234-444 (550)
236 cd05621 STKc_ROCK2 Catalytic d  99.9 2.6E-26 5.7E-31  190.2  11.7  162    5-177   137-304 (370)
237 cd06656 STKc_PAK3 Catalytic do  99.9 1.8E-26 3.9E-31  185.7  10.4  159    5-176   110-268 (297)
238 cd05628 STKc_NDR1 Catalytic do  99.9 1.4E-26   3E-31  191.4   9.9  165    3-177    94-293 (363)
239 cd06636 STKc_MAP4K4_6 Catalyti  99.9 2.1E-26 4.6E-31  183.7  10.6  158    4-176   115-278 (282)
240 cd05625 STKc_LATS1 Catalytic d  99.9 1.9E-26 4.2E-31  191.8  10.8  162    4-176    95-304 (382)
241 cd06608 STKc_myosinIII_like Ca  99.9 1.7E-26 3.8E-31  183.0  10.0  160    4-176   107-271 (275)
242 cd08227 PK_STRAD_alpha Pseudok  99.9 1.4E-26 3.1E-31  188.7   9.7  110    5-117    96-212 (327)
243 cd06642 STKc_STK25-YSK1 Cataly  99.9 1.8E-26 3.9E-31  183.8   9.9  158    5-177    96-253 (277)
244 cd05633 STKc_GRK3 Catalytic do  99.9 1.4E-26 3.1E-31  184.8   9.4  159    4-177    91-255 (279)
245 KOG4717 Serine/threonine prote  99.9 1.1E-26 2.5E-31  190.3   8.9  156    4-176   112-269 (864)
246 KOG0194 Protein tyrosine kinas  99.9 2.8E-27   6E-32  196.5   5.2  169    4-186   256-425 (474)
247 KOG1035 eIF-2alpha kinase GCN2  99.9 1.1E-26 2.5E-31  205.3   9.3  156    9-176   696-870 (1351)
248 cd07833 STKc_CDKL Catalytic do  99.9   2E-26 4.4E-31  184.1  10.0  169    4-176    94-284 (288)
249 cd05629 STKc_NDR_like_fungal C  99.9 1.8E-26   4E-31  191.6  10.0  163    4-177    95-305 (377)
250 cd08221 STKc_Nek9 Catalytic do  99.9   2E-26 4.3E-31  181.2   9.7  160    4-178    95-254 (256)
251 cd06631 STKc_YSK4 Catalytic do  99.9 1.8E-26 3.9E-31  182.5   9.4  162    4-176    96-261 (265)
252 cd06610 STKc_OSR1_SPAK Catalyt  99.9 2.8E-26   6E-31  181.2  10.3  163    5-176    97-263 (267)
253 cd05630 STKc_GRK6 Catalytic do  99.9 1.4E-26   3E-31  185.4   8.6  159    5-176    97-260 (285)
254 cd05598 STKc_LATS Catalytic do  99.9 1.2E-26 2.6E-31  192.6   8.5  163    4-177    95-301 (376)
255 cd05632 STKc_GRK5 Catalytic do  99.9 1.6E-26 3.4E-31  185.1   8.8  159    4-176    96-260 (285)
256 cd05574 STKc_phototropin_like   99.9 2.8E-26   6E-31  186.0  10.3  161    4-176    97-288 (316)
257 KOG0983 Mitogen-activated prot  99.9 1.8E-26 3.9E-31  175.9   8.4  191    3-205   184-378 (391)
258 cd06640 STKc_MST4 Catalytic do  99.9 4.5E-26 9.7E-31  181.5  11.1  158    5-177    96-253 (277)
259 cd06615 PKc_MEK Catalytic doma  99.9   3E-26 6.4E-31  185.4  10.1  168    4-178    93-288 (308)
260 cd07873 STKc_PCTAIRE1 Catalyti  99.9   1E-26 2.2E-31  187.4   7.3  168    4-176    98-285 (301)
261 cd06648 STKc_PAK_II Catalytic   99.9 2.9E-26 6.4E-31  183.5   9.9  159    5-176   110-268 (285)
262 cd07843 STKc_CDC2L1 Catalytic   99.9 1.7E-26 3.7E-31  185.3   8.5  167    5-176   101-289 (293)
263 cd06629 STKc_MAPKKK_Bck1_like   99.9 5.5E-26 1.2E-30  180.3  11.3  165    5-177   103-269 (272)
264 cd08216 PK_STRAD Pseudokinase   99.9   3E-26 6.4E-31  185.6   9.9  168    5-177    96-295 (314)
265 cd05122 PKc_STE Catalytic doma  99.9 4.1E-26 8.9E-31  178.3  10.3  158    5-176    93-250 (253)
266 cd05627 STKc_NDR2 Catalytic do  99.9 1.5E-26 3.2E-31  191.1   8.1  163    3-176    94-292 (360)
267 cd07838 STKc_CDK4_6_like Catal  99.9   5E-26 1.1E-30  181.7  10.8  166    5-176   102-283 (287)
268 cd05118 STKc_CMGC Catalytic do  99.9 2.4E-26 5.3E-31  183.1   9.0  168    4-176    92-279 (283)
269 cd06605 PKc_MAPKK Catalytic do  99.9   2E-26 4.4E-31  182.0   8.4  159    5-176    95-256 (265)
270 cd06611 STKc_SLK_like Catalyti  99.9 2.8E-26 6.2E-31  182.8   9.3  161    4-177    97-262 (280)
271 cd05622 STKc_ROCK1 Catalytic d  99.9 7.5E-26 1.6E-30  187.6  12.0  163    5-178   137-305 (371)
272 cd07846 STKc_CDKL2_3 Catalytic  99.9 5.4E-26 1.2E-30  181.6  10.5  168    4-176    94-282 (286)
273 cd08217 STKc_Nek2 Catalytic do  99.9 3.8E-26 8.3E-31  180.0   9.5  159    4-177    99-262 (265)
274 cd07842 STKc_CDK8_like Catalyt  99.9   2E-26 4.3E-31  186.6   8.0  113    5-120   103-221 (316)
275 cd05606 STKc_beta_ARK Catalyti  99.9 6.8E-26 1.5E-30  180.7  10.9  159    4-177    91-255 (278)
276 KOG0610 Putative serine/threon  99.9 6.8E-26 1.5E-30  181.0  10.7  164    1-176   170-391 (459)
277 cd06917 STKc_NAK1_like Catalyt  99.9 5.9E-26 1.3E-30  180.6  10.4  159    5-177    96-255 (277)
278 cd07841 STKc_CDK7 Catalytic do  99.9 5.8E-26 1.3E-30  182.6  10.4  168    5-177    97-282 (298)
279 cd06607 STKc_TAO Catalytic dom  99.9 7.8E-26 1.7E-30  182.8  11.1  156    4-177   109-267 (307)
280 cd07831 STKc_MOK Catalytic dom  99.9   4E-26 8.7E-31  181.9   9.2  166    4-176    94-278 (282)
281 cd05611 STKc_Rim15_like Cataly  99.9 4.2E-26 9.1E-31  179.9   9.2  161    4-180    91-251 (260)
282 cd05609 STKc_MAST Catalytic do  99.9 4.1E-26 8.8E-31  184.3   9.3  167    4-181    95-274 (305)
283 PHA03390 pk1 serine/threonine-  99.9 3.9E-26 8.5E-31  181.1   8.9  155    4-176   103-261 (267)
284 cd07866 STKc_BUR1 Catalytic do  99.9 2.8E-26 6.1E-31  185.2   8.2  170    4-176   109-307 (311)
285 cd05578 STKc_Yank1 Catalytic d  99.9 7.1E-26 1.5E-30  178.4  10.3  157    5-175    95-253 (258)
286 cd05572 STKc_cGK_PKG Catalytic  99.9 7.8E-26 1.7E-30  178.6  10.3  159    4-176    87-251 (262)
287 cd08530 STKc_CNK2-like Catalyt  99.9 6.4E-26 1.4E-30  178.1   9.8  157    4-177    97-253 (256)
288 cd06618 PKc_MKK7 Catalytic dom  99.9 4.1E-26 8.8E-31  183.5   8.8  161    4-177   108-273 (296)
289 cd07858 STKc_TEY_MAPK_plant Ca  99.9 6.6E-26 1.4E-30  185.6  10.1  169    3-177   101-291 (337)
290 cd07834 STKc_MAPK Catalytic do  99.9 7.8E-26 1.7E-30  184.5  10.5  171    4-177    97-289 (330)
291 cd08218 STKc_Nek1 Catalytic do  99.9 6.9E-26 1.5E-30  178.2   9.8  157    5-176    96-252 (256)
292 cd06632 STKc_MEKK1_plant Catal  99.9 6.2E-26 1.3E-30  178.4   9.5  158    4-176    96-254 (258)
293 cd07855 STKc_ERK5 Catalytic do  99.9 1.1E-25 2.3E-30  184.1  11.0  172    3-177   100-294 (334)
294 cd06647 STKc_PAK_I Catalytic d  99.9 1.6E-25 3.4E-30  180.0  11.7  160    5-177   110-269 (293)
295 cd06621 PKc_MAPKK_Pek1_like Ca  99.9 5.5E-26 1.2E-30  181.9   9.1  165    4-177    99-266 (287)
296 cd06606 STKc_MAPKKK Catalytic   99.9 1.1E-25 2.3E-30  176.6  10.6  161    5-176    96-256 (260)
297 cd07849 STKc_ERK1_2_like Catal  99.9 8.6E-26 1.9E-30  184.8  10.3  171    4-177   100-292 (336)
298 cd07832 STKc_CCRK Catalytic do  99.9   8E-26 1.7E-30  180.5   9.9  169    4-177    93-282 (286)
299 PLN00181 protein SPA1-RELATED;  99.9 2.7E-26 5.9E-31  206.6   8.0  158    4-176    74-264 (793)
300 cd06630 STKc_MEKK1 Catalytic d  99.9 9.4E-26   2E-30  178.5  10.0  164    4-176    97-263 (268)
301 cd07844 STKc_PCTAIRE_like Cata  99.9 7.7E-26 1.7E-30  181.3   9.6  168    4-176    97-287 (291)
302 cd07857 STKc_MPK1 Catalytic do  99.9 9.6E-26 2.1E-30  184.2  10.3  170    3-176    98-291 (332)
303 cd06624 STKc_ASK Catalytic dom  99.9 1.5E-25 3.3E-30  177.6  11.1  156    8-176   106-264 (268)
304 cd06622 PKc_MAPKK_PBS2_like Ca  99.9 1.6E-25 3.4E-30  179.0  11.1  159    5-177    97-262 (286)
305 cd06626 STKc_MEKK4 Catalytic d  99.9 1.9E-25 4.1E-30  176.3  11.4  163    4-176    93-260 (264)
306 cd07870 STKc_PFTAIRE2 Catalyti  99.9 9.1E-26   2E-30  180.9   9.7  166    5-176    98-287 (291)
307 cd07840 STKc_CDK9_like Catalyt  99.9 4.3E-26 9.3E-31  182.0   7.7  168    5-176    95-283 (287)
308 cd06634 STKc_TAO2 Catalytic do  99.9 1.1E-25 2.3E-30  182.1  10.0  157    4-178   109-268 (308)
309 cd08220 STKc_Nek8 Catalytic do  99.9 1.3E-25 2.9E-30  176.4  10.2  157    4-176    95-252 (256)
310 cd06623 PKc_MAPKK_plant_like C  99.9 1.1E-25 2.3E-30  177.6   9.8  162    5-177    94-256 (264)
311 cd05623 STKc_MRCK_alpha Cataly  99.9 1.7E-25 3.7E-30  182.8  11.1  164    4-177    96-266 (332)
312 cd07845 STKc_CDK10 Catalytic d  99.9 5.4E-26 1.2E-30  183.9   8.0  169    4-177   102-290 (309)
313 cd05579 STKc_MAST_like Catalyt  99.9 6.8E-26 1.5E-30  178.6   8.4  164    5-180    88-257 (265)
314 cd05597 STKc_DMPK_like Catalyt  99.9 6.2E-25 1.4E-29  179.4  14.3  164    4-177    96-266 (331)
315 cd08226 PK_STRAD_beta Pseudoki  99.9 1.4E-25 3.1E-30  182.9  10.5  170    5-177    96-308 (328)
316 KOG0666 Cyclin C-dependent kin  99.9 7.4E-26 1.6E-30  175.3   8.2  114    3-119   125-244 (438)
317 cd07860 STKc_CDK2_3 Catalytic   99.9 7.9E-26 1.7E-30  180.5   8.5  167    4-176    94-280 (284)
318 cd06652 STKc_MEKK2 Catalytic d  99.9 1.4E-25   3E-30  177.5   9.8  159    5-176   101-260 (265)
319 KOG0196 Tyrosine kinase, EPH (  99.9 1.4E-26 3.1E-31  197.0   4.4  169    1-183   722-893 (996)
320 cd07852 STKc_MAPK15 Catalytic   99.9 8.9E-26 1.9E-30  184.8   8.6  169    6-177   103-295 (337)
321 cd06620 PKc_MAPKK_Byr1_like Ca  99.9   1E-25 2.2E-30  180.1   8.7  162    4-178    97-267 (284)
322 cd08215 STKc_Nek Catalytic dom  99.9 1.2E-25 2.7E-30  176.3   9.0  158    4-176    97-254 (258)
323 cd06614 STKc_PAK Catalytic dom  99.9   2E-25 4.4E-30  178.5  10.3  159    6-177   112-270 (286)
324 PTZ00266 NIMA-related protein   99.9 2.5E-25 5.3E-30  198.8  11.8  160    4-176   112-294 (1021)
325 cd05624 STKc_MRCK_beta Catalyt  99.9 4.9E-25 1.1E-29  180.1  12.6  164    4-177    96-266 (331)
326 cd06635 STKc_TAO1 Catalytic do  99.9 3.1E-25 6.6E-30  180.2  11.3  159    4-180   119-280 (317)
327 cd07837 STKc_CdkB_plant Cataly  99.9 1.9E-25   4E-30  179.3   9.8  167    4-176   104-290 (295)
328 PRK13184 pknD serine/threonine  99.9 1.7E-25 3.7E-30  198.9  10.5  166    5-181   108-290 (932)
329 KOG0584 Serine/threonine prote  99.9 2.4E-26 5.2E-31  191.7   4.4  161    2-177   135-296 (632)
330 cd06657 STKc_PAK4 Catalytic do  99.9 2.3E-25 4.9E-30  179.0   9.8  159    5-176   111-269 (292)
331 cd05577 STKc_GRK Catalytic dom  99.9 2.2E-25 4.9E-30  177.5   9.6  156    5-173    90-245 (277)
332 cd07879 STKc_p38delta_MAPK13 C  99.9   1E-25 2.2E-30  184.9   7.8  164    5-177   112-297 (342)
333 cd06633 STKc_TAO3 Catalytic do  99.9 2.9E-25 6.3E-30  180.0  10.4  157    3-177   114-273 (313)
334 cd07835 STKc_CDK1_like Catalyt  99.9 9.7E-26 2.1E-30  179.9   7.4  166    5-176    94-279 (283)
335 cd07830 STKc_MAK_like Catalyti  99.9 4.3E-25 9.3E-30  176.1  11.0  166    5-176    94-279 (283)
336 KOG0032 Ca2+/calmodulin-depend  99.9   3E-25 6.5E-30  182.7  10.2  158    7-177   132-293 (382)
337 cd05580 STKc_PKA Catalytic dom  99.9 2.9E-25 6.2E-30  178.1   9.5  154    4-176    95-253 (290)
338 KOG0579 Ste20-like serine/thre  99.9 1.7E-25 3.6E-30  187.4   8.1  160    4-176   124-288 (1187)
339 cd06627 STKc_Cdc7_like Catalyt  99.9 3.8E-25 8.2E-30  173.4   9.6  157    5-176    94-250 (254)
340 KOG4645 MAPKKK (MAP kinase kin  99.9 2.8E-26 6.2E-31  203.8   3.4  163    4-178  1328-1495(1509)
341 cd07864 STKc_CDK12 Catalytic d  99.9 2.2E-25 4.8E-30  179.4   8.2  168    4-176   110-298 (302)
342 cd06641 STKc_MST3 Catalytic do  99.9 4.3E-25 9.2E-30  175.9   9.6  158    5-177    96-253 (277)
343 cd07829 STKc_CDK_like Catalyti  99.9 3.8E-25 8.1E-30  176.2   9.0  167    5-176    93-278 (282)
344 cd05583 STKc_MSK_N N-terminal   99.9 6.4E-25 1.4E-29  175.8   9.8  166    4-181    99-267 (288)
345 KOG0986 G protein-coupled rece  99.9   2E-25 4.3E-30  180.3   6.8  152    5-170   282-434 (591)
346 cd08225 STKc_Nek5 Catalytic do  99.9 4.9E-25 1.1E-29  173.2   8.7  157    6-177    97-254 (257)
347 KOG4257 Focal adhesion tyrosin  99.9   3E-25 6.4E-30  185.4   7.4  164    2-179   483-647 (974)
348 cd07851 STKc_p38 Catalytic dom  99.9 2.4E-25 5.3E-30  182.7   6.8  164    5-177   113-298 (343)
349 cd05581 STKc_PDK1 Catalytic do  99.9 5.8E-25 1.2E-29  174.8   8.6  158    5-176    97-276 (280)
350 KOG4278 Protein tyrosine kinas  99.9 2.7E-25   6E-30  185.8   6.9  158    8-179   363-521 (1157)
351 cd05576 STKc_RPK118_like Catal  99.9 5.5E-25 1.2E-29  171.6   8.1  144    5-171    80-223 (237)
352 cd06653 STKc_MEKK3_like_1 Cata  99.9 1.3E-24 2.9E-29  171.8  10.1  160    4-176   100-260 (264)
353 cd07836 STKc_Pho85 Catalytic d  99.9 6.5E-25 1.4E-29  175.2   8.3  167    5-176    95-280 (284)
354 cd05123 STKc_AGC Catalytic dom  99.9 1.6E-24 3.4E-29  169.7  10.2  154    4-173    87-240 (250)
355 cd07854 STKc_MAPK4_6 Catalytic  99.9 1.2E-24 2.6E-29  178.5   9.9  170    5-177   109-300 (342)
356 PLN00009 cyclin-dependent kina  99.9 1.1E-24 2.4E-29  174.9   9.3  166    6-176    98-283 (294)
357 PLN00113 leucine-rich repeat r  99.9 2.6E-24 5.6E-29  197.9  13.0  169    6-182   776-952 (968)
358 cd07877 STKc_p38alpha_MAPK14 C  99.9 6.3E-25 1.4E-29  180.4   7.6  164    5-177   115-300 (345)
359 cd08222 STKc_Nek11 Catalytic d  99.9 1.9E-24 4.1E-29  170.5   9.4  158    3-176    99-256 (260)
360 KOG0669 Cyclin T-dependent kin  99.9 5.2E-25 1.1E-29  166.3   5.9  172    3-177   117-315 (376)
361 PLN03225 Serine/threonine-prot  99.9 1.1E-24 2.4E-29  188.6   8.8  164    9-177   254-450 (566)
362 cd07856 STKc_Sty1_Hog1 Catalyt  99.9 1.9E-24 4.2E-29  176.3   9.5  165    5-177   103-288 (328)
363 KOG0577 Serine/threonine prote  99.9 1.2E-24 2.6E-29  180.9   7.9  155    4-176   120-277 (948)
364 PTZ00024 cyclin-dependent prot  99.9 4.6E-24   1E-28  174.4  11.1  170    4-177   113-313 (335)
365 KOG0200 Fibroblast/platelet-de  99.9 2.9E-24 6.3E-29  187.6  10.3  164    6-181   414-579 (609)
366 KOG0665 Jun-N-terminal kinase   99.9   2E-24 4.4E-29  167.6   7.3  165    7-177   115-310 (369)
367 KOG0574 STE20-like serine/thre  99.9 2.2E-25 4.7E-30  172.3   1.9  162    2-177   121-283 (502)
368 KOG0580 Serine/threonine prote  99.9 2.2E-24 4.7E-29  161.4   6.8  158    2-177   116-273 (281)
369 cd07880 STKc_p38gamma_MAPK12 C  99.9 4.3E-24 9.4E-29  175.3   9.2  164    5-176   113-297 (343)
370 cd05613 STKc_MSK1_N N-terminal  99.9 7.7E-24 1.7E-28  169.7  10.2  162    4-177    99-268 (290)
371 smart00220 S_TKc Serine/Threon  99.9   7E-24 1.5E-28  164.5   9.0  157    7-176    84-240 (244)
372 KOG0614 cGMP-dependent protein  99.9 1.4E-24 2.9E-29  177.7   5.1  159    3-176   513-676 (732)
373 KOG2052 Activin A type IB rece  99.9 1.4E-23 2.9E-28  169.2  10.4  178    5-182   303-504 (513)
374 KOG1024 Receptor-like protein   99.9 4.2E-24 9.2E-29  170.1   7.1  162    5-179   391-553 (563)
375 KOG1094 Discoidin domain recep  99.9 3.9E-24 8.5E-29  177.4   7.0  167    8-181   635-804 (807)
376 KOG3653 Transforming growth fa  99.9 2.1E-23 4.6E-28  169.2  10.1  177    4-184   301-506 (534)
377 KOG0199 ACK and related non-re  99.9 1.2E-23 2.6E-28  177.7   8.6  161    4-177   206-368 (1039)
378 KOG0664 Nemo-like MAPK-related  99.9 3.4E-24 7.4E-29  163.8   4.1  170    5-178   151-344 (449)
379 KOG0586 Serine/threonine prote  99.9 1.4E-23 3.1E-28  174.9   6.9  157    4-177   149-306 (596)
380 KOG1006 Mitogen-activated prot  99.9   1E-24 2.2E-29  165.7  -0.3  163    4-177   161-327 (361)
381 KOG0690 Serine/threonine prote  99.9 2.4E-23 5.3E-28  162.5   7.0  159    2-176   260-423 (516)
382 KOG1027 Serine/threonine prote  99.9 1.6E-23 3.5E-28  179.6   4.5  153   11-176   607-766 (903)
383 KOG4236 Serine/threonine prote  99.9   1E-23 2.2E-28  173.5   3.0  160    2-176   656-818 (888)
384 KOG0696 Serine/threonine prote  99.9 7.2E-23 1.6E-27  164.3   7.3  151    3-169   443-593 (683)
385 KOG0670 U4/U6-associated splic  99.9 7.5E-23 1.6E-27  168.0   5.4  166    4-176   530-745 (752)
386 KOG1151 Tousled-like protein k  99.9 1.5E-21 3.3E-26  158.0  11.5  167    3-175   561-739 (775)
387 KOG0695 Serine/threonine prote  99.9 2.1E-22 4.4E-27  158.1   6.2  160    2-169   343-502 (593)
388 KOG0984 Mitogen-activated prot  99.9   2E-22 4.2E-27  148.3   5.6  112    3-119   141-256 (282)
389 KOG0607 MAP kinase-interacting  99.9 8.6E-22 1.9E-26  153.4   8.2  166    3-176   169-360 (463)
390 KOG4250 TANK binding protein k  99.9 1.2E-21 2.5E-26  165.9   8.6  170    3-178   113-307 (732)
391 KOG1025 Epidermal growth facto  99.9 8.6E-22 1.9E-26  169.0   7.9  165    2-179   790-955 (1177)
392 KOG0612 Rho-associated, coiled  99.9 1.1E-21 2.3E-26  173.1   8.6  159    6-177   171-338 (1317)
393 KOG0662 Cyclin-dependent kinas  99.9 2.2E-21 4.9E-26  140.1   8.1  169    4-177    95-283 (292)
394 cd05610 STKc_MASTL Catalytic d  99.9 2.1E-21 4.5E-26  171.8   9.3   55    4-61     98-152 (669)
395 KOG0608 Warts/lats-like serine  99.8 7.2E-21 1.6E-25  159.7   9.7  113    4-119   723-875 (1034)
396 PLN03224 probable serine/threo  99.8 1.6E-20 3.4E-25  159.7  10.6  163    6-176   305-499 (507)
397 KOG1290 Serine/threonine prote  99.8 4.5E-21 9.8E-26  156.4   5.7  101   77-177   413-550 (590)
398 cd00180 PKc Catalytic domain o  99.8 2.9E-20 6.2E-25  140.8   9.5  126    5-177    87-214 (215)
399 KOG1345 Serine/threonine kinas  99.8 5.2E-21 1.1E-25  146.1   5.0  174    7-191   118-301 (378)
400 KOG0668 Casein kinase II, alph  99.8 2.6E-20 5.6E-25  139.2   6.9  160    6-176   128-321 (338)
401 KOG0587 Traf2- and Nck-interac  99.8 6.8E-20 1.5E-24  158.3   9.1  161    4-177   117-282 (953)
402 KOG0590 Checkpoint kinase and   99.8 5.3E-20 1.1E-24  159.6   6.7  167    5-176   415-584 (601)
403 KOG1152 Signal transduction se  99.8 3.3E-19 7.2E-24  148.3   3.6  107    3-116   663-770 (772)
404 KOG1023 Natriuretic peptide re  99.7 3.7E-18 8.1E-23  142.7   8.1  175    3-181    41-224 (484)
405 KOG1167 Serine/threonine prote  99.7 6.6E-18 1.4E-22  135.7   7.3  110    5-117   127-280 (418)
406 smart00221 STYKc Protein kinas  99.7 3.2E-17   7E-22  125.9   7.3  107    7-117    95-202 (225)
407 KOG0576 Mitogen-activated prot  99.7 2.6E-17 5.6E-22  139.0   6.1  162    4-176   106-270 (829)
408 KOG1164 Casein kinase (serine/  99.7 1.6E-16 3.4E-21  129.5  10.4  169    4-181   116-297 (322)
409 PF14531 Kinase-like:  Kinase-l  99.7 4.6E-17 9.9E-22  128.4   5.9  139    7-168   142-288 (288)
410 KOG1033 eIF-2alpha kinase PEK/  99.7 6.3E-17 1.4E-21  133.7   3.8  151    5-174   354-509 (516)
411 KOG1240 Protein kinase contain  99.6 1.6E-16 3.4E-21  140.8   5.1  161    8-181   118-295 (1431)
412 KOG4158 BRPK/PTEN-induced prot  99.6 1.6E-15 3.4E-20  122.0  10.0  160    6-178   337-511 (598)
413 KOG0195 Integrin-linked kinase  99.6 7.2E-16 1.6E-20  118.4   5.8  157    6-181   285-446 (448)
414 KOG1165 Casein kinase (serine/  99.6   4E-15 8.6E-20  117.0   9.8  171    4-181   118-299 (449)
415 COG0515 SPS1 Serine/threonine   99.6   9E-15   2E-19  117.4   9.8  167    6-177    97-275 (384)
416 KOG0606 Microtubule-associated  99.5 1.1E-14 2.4E-19  128.9   3.0  140   19-169   152-304 (1205)
417 KOG1163 Casein kinase (serine/  99.4 6.7E-14 1.5E-18  105.8   4.3  167    5-178   106-281 (341)
418 KOG0603 Ribosomal protein S6 k  99.4 4.1E-14   9E-19  119.3   3.4  147    6-178    93-241 (612)
419 KOG0590 Checkpoint kinase and   99.3 2.4E-12 5.2E-17  112.2   3.4  161    7-176   120-285 (601)
420 KOG1166 Mitotic checkpoint ser  99.2 2.4E-11 5.2E-16  109.1   8.9  109    3-114   787-902 (974)
421 PRK09188 serine/threonine prot  99.2 1.2E-11 2.6E-16  101.7   6.3   74   13-89    114-194 (365)
422 cd05147 RIO1_euk RIO kinase fa  99.1 5.5E-11 1.2E-15   89.6   5.2   56    4-63    111-167 (190)
423 PRK12274 serine/threonine prot  99.1 2.7E-11   6E-16   91.5   3.5  100   13-115    94-207 (218)
424 cd05145 RIO1_like RIO kinase f  99.1 9.9E-11 2.1E-15   88.3   5.7   56    5-64    112-168 (190)
425 KOG1266 Protein kinase [Signal  99.1 2.1E-10 4.5E-15   90.8   6.5  156    5-176   171-330 (458)
426 PRK10359 lipopolysaccharide co  99.1 4.7E-11   1E-15   91.8   1.9   77   15-109   140-216 (232)
427 COG4248 Uncharacterized protei  99.0 7.6E-09 1.6E-13   84.8  13.0  173    3-181   110-300 (637)
428 KOG2137 Protein kinase [Signal  98.8 2.7E-09 5.9E-14   91.8   4.4  157   12-177   101-265 (700)
429 smart00090 RIO RIO-like kinase  98.8 1.2E-08 2.7E-13   79.5   5.6   56    6-64    144-199 (237)
430 KOG0601 Cyclin-dependent kinas  98.7 3.5E-08 7.6E-13   83.6   7.0  158    5-176   213-378 (524)
431 cd05144 RIO2_C RIO kinase fami  98.7 2.2E-08 4.8E-13   75.9   4.7   52   10-64    125-176 (198)
432 PRK01723 3-deoxy-D-manno-octul  98.7   2E-08 4.3E-13   78.5   4.1   46   15-63    147-192 (239)
433 cd05119 RIO RIO kinase family,  98.6 5.1E-08 1.1E-12   73.0   4.4   51   10-64    114-165 (187)
434 PRK10345 hypothetical protein;  98.5 9.9E-08 2.2E-12   72.9   4.8   45   13-60    107-157 (210)
435 PRK14879 serine/threonine prot  98.5 1.4E-07 2.9E-12   72.1   4.6   48   11-62     96-143 (211)
436 KOG0606 Microtubule-associated  98.5 4.8E-07   1E-11   81.5   8.5  150   12-172   906-1084(1205)
437 TIGR03724 arch_bud32 Kae1-asso  98.5 2.1E-07 4.6E-12   70.4   4.4   45   14-62     94-138 (199)
438 PRK09605 bifunctional UGMP fam  98.4 2.1E-07 4.5E-12   81.1   3.9   47   12-62    430-476 (535)
439 KOG0601 Cyclin-dependent kinas  98.3 9.8E-07 2.1E-11   75.0   5.5  153    6-179   362-516 (524)
440 KOG1243 Protein kinase [Genera  98.3 1.4E-06   3E-11   75.2   6.4   96   11-112   105-200 (690)
441 cd05146 RIO3_euk RIO kinase fa  98.3 1.5E-06 3.3E-11   65.4   5.4   54    7-64    121-175 (197)
442 cd05120 APH_ChoK_like Aminogly  98.2 2.4E-06 5.2E-11   61.0   5.5   55    8-62     84-138 (155)
443 cd05151 ChoK Choline Kinase (C  98.0   9E-06   2E-10   59.7   4.4   49   13-62     86-136 (170)
444 PRK15123 lipopolysaccharide co  97.9 1.3E-05 2.9E-10   63.5   4.9   53    7-62    135-194 (268)
445 PF06293 Kdo:  Lipopolysacchari  97.9 1.3E-05 2.9E-10   61.2   4.6   54    7-63    115-171 (206)
446 TIGR01982 UbiB 2-polyprenylphe  97.7   6E-05 1.3E-09   64.1   5.7   49   13-64    259-308 (437)
447 COG3642 Mn2+-dependent serine/  97.7 5.6E-05 1.2E-09   56.0   4.6   46   13-62     95-140 (204)
448 PRK09902 hypothetical protein;  97.6 7.8E-05 1.7E-09   56.7   4.6   54    6-62    124-179 (216)
449 PF01163 RIO1:  RIO1 family;  I  97.6 0.00016 3.5E-09   54.3   5.2   50   10-63    106-156 (188)
450 KOG3087 Serine/threonine prote  97.4 0.00025 5.4E-09   52.6   4.7   47   13-62    116-165 (229)
451 KOG3741 Poly(A) ribonuclease s  97.3 0.00055 1.2E-08   58.2   5.5   88    3-112   386-473 (655)
452 PF11883 DUF3403:  Domain of un  97.0 0.00068 1.5E-08   38.6   2.7   44  181-224     3-48  (48)
453 PF06176 WaaY:  Lipopolysacchar  96.9  0.0013 2.8E-08   50.4   4.0   43   15-61    140-182 (229)
454 PF12260 PIP49_C:  Protein-kina  96.9  0.0025 5.4E-08   47.9   5.4   57    6-62     55-111 (188)
455 PRK04750 ubiB putative ubiquin  96.6  0.0026 5.6E-08   55.4   4.0   38   25-65    275-316 (537)
456 COG0478 RIO-like serine/threon  96.6  0.0045 9.8E-08   48.8   4.9   51    9-62    201-251 (304)
457 cd05154 ACAD10_11_like Acyl-Co  96.5  0.0071 1.5E-07   46.1   5.8   30   33-62    175-206 (223)
458 KOG1035 eIF-2alpha kinase GCN2  96.4   0.014   3E-07   54.6   7.8  149    4-178   280-435 (1351)
459 COG1718 RIO1 Serine/threonine   96.0   0.013 2.9E-07   45.7   5.0   53    8-64    164-217 (268)
460 cd05156 ChoK_euk Choline Kinas  94.3    0.12 2.6E-06   41.6   5.8   29   33-61    180-212 (302)
461 cd05157 ETNK_euk Ethanolamine   94.2   0.097 2.1E-06   40.4   4.9   29   33-61    171-200 (235)
462 cd05155 APH_ChoK_like_1 Unchar  93.8   0.089 1.9E-06   40.8   4.1   30   33-62    165-194 (235)
463 PF01636 APH:  Phosphotransfera  93.8   0.081 1.8E-06   40.4   3.7   30   33-62    167-197 (239)
464 PF07387 Seadorna_VP7:  Seadorn  93.6   0.075 1.6E-06   41.0   3.0   38   21-59    152-189 (308)
465 COG5072 ALK1 Serine/threonine   93.6    0.15 3.3E-06   42.3   4.9   55    5-62    316-370 (488)
466 TIGR00938 thrB_alt homoserine   93.3    0.11 2.4E-06   42.0   4.0   29   33-61    188-216 (307)
467 TIGR02906 spore_CotS spore coa  92.9    0.24 5.1E-06   40.0   5.2   28   33-61    188-215 (313)
468 PF01633 Choline_kinase:  Choli  92.5    0.11 2.3E-06   39.7   2.7   30   33-62    144-174 (211)
469 cd05153 HomoserineK_II Homoser  92.4    0.17 3.7E-06   40.6   3.8   29   34-62    177-205 (296)
470 COG0510 ycfN Thiamine kinase a  92.2    0.33 7.2E-06   38.7   5.2   47   15-62    137-183 (269)
471 PRK05231 homoserine kinase; Pr  92.1    0.26 5.6E-06   40.0   4.6   28   34-61    189-216 (319)
472 TIGR02172 Fb_sc_TIGR02172 Fibr  92.1    0.14   3E-06   39.7   2.8   28   33-61    154-181 (226)
473 PRK10271 thiK thiamine kinase;  91.9    0.13 2.7E-06   38.6   2.3   29   33-62     78-106 (188)
474 PLN02236 choline kinase         91.9    0.36 7.9E-06   39.9   5.2   30   33-62    201-231 (344)
475 cd05150 APH Aminoglycoside 3'-  91.8    0.22 4.7E-06   38.8   3.7   29   33-61    164-192 (244)
476 TIGR02721 ycfN_thiK thiamine k  91.8    0.14 3.1E-06   40.2   2.6   29   33-62    147-175 (256)
477 PHA03111 Ser/Thr kinase; Provi  90.6    0.37 7.9E-06   39.6   3.9   38   12-49    281-319 (444)
478 TIGR02904 spore_ysxE spore coa  90.5    0.44 9.6E-06   38.6   4.4   30   33-62    197-226 (309)
479 KOG0576 Mitogen-activated prot  90.1     0.2 4.4E-06   44.4   2.2   94   11-115   337-430 (829)
480 PF05445 Pox_ser-thr_kin:  Poxv  90.0    0.43 9.3E-06   39.3   3.8   37   12-48    277-314 (434)
481 smart00587 CHK ZnF_C4 abd HLH   89.9    0.29 6.3E-06   36.9   2.7   30   33-62    121-155 (196)
482 COG2334 Putative homoserine ki  89.2     1.1 2.4E-05   36.9   5.7   28   34-61    199-227 (331)
483 cd05152 MPH2' Macrolide 2'-Pho  88.8    0.33 7.2E-06   38.8   2.4   30   33-62    186-216 (276)
484 COG0661 AarF Predicted unusual  88.3    0.96 2.1E-05   39.5   5.0   39   24-65    279-317 (517)
485 KOG2268 Serine/threonine prote  87.8    0.86 1.9E-05   37.5   4.1   48   13-63    205-252 (465)
486 PLN02421 phosphotransferase, a  86.6    0.61 1.3E-05   38.3   2.8   30   33-62    183-213 (330)
487 COG3173 Predicted aminoglycosi  86.5    0.68 1.5E-05   37.8   2.9   33   30-62    196-228 (321)
488 PF10140 YukC:  WXG100 protein   85.8    0.89 1.9E-05   37.7   3.3   54    5-63     54-107 (359)
489 PRK06148 hypothetical protein;  85.6     1.5 3.2E-05   41.8   5.0   29   34-62    205-236 (1013)
490 KOG1826 Ras GTPase activating   85.4    0.12 2.6E-06   50.4  -2.1   96   20-117  1345-1442(2724)
491 PRK09550 mtnK methylthioribose  83.7       2 4.4E-05   36.3   4.6   29   33-62    224-252 (401)
492 PF02958 EcKinase:  Ecdysteroid  83.4    0.72 1.5E-05   37.0   1.8   30   33-62    216-250 (294)
493 KOG1093 Predicted protein kina  82.8    0.15 3.3E-06   44.1  -2.4   81   94-174   110-191 (725)
494 PRK11768 serine/threonine prot  82.0     2.3   5E-05   34.8   4.2   26   34-61    198-223 (325)
495 PRK06149 hypothetical protein;  78.7     2.9 6.4E-05   39.7   4.3   28   34-61    210-242 (972)
496 COG4499 Predicted membrane pro  78.1     4.4 9.6E-05   33.7   4.5   55    6-64     81-135 (434)
497 PRK10593 hypothetical protein;  75.1     8.7 0.00019   31.0   5.6   27   32-58    193-221 (297)
498 PF10707 YrbL-PhoP_reg:  PhoP r  74.9     5.4 0.00012   30.3   4.1   35   19-56    127-165 (199)
499 TIGR01767 MTRK 5-methylthiorib  73.4     3.1 6.8E-05   34.7   2.7   29   33-62    193-221 (370)
500 PLN02756 S-methyl-5-thioribose  71.5     6.7 0.00015   33.4   4.2   29   32-61    230-258 (418)

No 1  
>KOG0581 consensus Mitogen-activated protein kinase kinase (MAP2K) [Signal transduction mechanisms]
Probab=100.00  E-value=8.5e-34  Score=223.47  Aligned_cols=159  Identities=30%  Similarity=0.448  Sum_probs=128.1

Q ss_pred             CCCChHHHHHHHHHHHHHHhhhhc-CCCCceEecCCCCCceEECCCCCceEeeecceeecCCCCCCCcccccccccccCC
Q 041793            5 KILDWPKRFHIICGTARGVMYLHQ-DSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDEIEGNTNRVIGTYGYMA   83 (224)
Q Consensus         5 ~~l~~~~~~~i~~qi~~~l~~Lh~-~~~~~i~H~dl~~~nil~~~~~~~kl~df~~~~~~~~~~~~~~~~~~~~~~~y~a   83 (224)
                      +.+++...-+++.+|+.||.|||+ .+   |+||||||+|+|+...|.+||+|||.+..+.+.    ...+++||..|+|
T Consensus       173 g~i~E~~L~~ia~~VL~GL~YLh~~~~---IIHRDIKPsNlLvNskGeVKicDFGVS~~lvnS----~a~tfvGT~~YMs  245 (364)
T KOG0581|consen  173 GRIPEPVLGKIARAVLRGLSYLHEERK---IIHRDIKPSNLLVNSKGEVKICDFGVSGILVNS----IANTFVGTSAYMS  245 (364)
T ss_pred             CCCCHHHHHHHHHHHHHHHHHHhhccC---eeeccCCHHHeeeccCCCEEeccccccHHhhhh----hcccccccccccC
Confidence            568999999999999999999996 66   999999999999999999999999999876543    4566899999999


Q ss_pred             cccccCCCcccccceEehhHHHHHHHhcccCCCCc--CCCcccccccccCCCccccCccccCC-cCHHHHHHHHHHHHHh
Q 041793           84 PEYASDGKFSVKSDVFSFGILLLEIISGKKNRGFY--HSDNKLNLIGHVSMPSQLIDPCIQGS-FNLVEVIRCIHIGLLC  160 (224)
Q Consensus        84 PE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~li~~c  160 (224)
                      ||.+.+..|+.++||||||+.++|++.|..||...  ...+..+++..+-.   -+.+.++.. ++    ..+..++..|
T Consensus       246 PERi~g~~Ys~~sDIWSLGLsllE~a~GrfP~~~~~~~~~~~~~Ll~~Iv~---~ppP~lP~~~fS----~ef~~FV~~C  318 (364)
T KOG0581|consen  246 PERISGESYSVKSDIWSLGLSLLELAIGRFPYPPPNPPYLDIFELLCAIVD---EPPPRLPEGEFS----PEFRSFVSCC  318 (364)
T ss_pred             hhhhcCCcCCcccceecccHHHHHHhhCCCCCCCcCCCCCCHHHHHHHHhc---CCCCCCCcccCC----HHHHHHHHHH
Confidence            99999999999999999999999999999998653  12233333332221   111222222 33    2366788899


Q ss_pred             ccCCCCCCCChHHHHHH
Q 041793          161 VQQHPKDRPSMPSVILM  177 (224)
Q Consensus       161 l~~dp~~Rps~~~v~~~  177 (224)
                      |+.||.+|||++++++.
T Consensus       319 L~Kdp~~R~s~~qLl~H  335 (364)
T KOG0581|consen  319 LRKDPSERPSAKQLLQH  335 (364)
T ss_pred             hcCCcccCCCHHHHhcC
Confidence            99999999999999874


No 2  
>KOG0192 consensus Tyrosine kinase specific for activated (GTP-bound) p21cdc42Hs [Signal transduction mechanisms]
Probab=100.00  E-value=4.3e-33  Score=227.22  Aligned_cols=166  Identities=32%  Similarity=0.435  Sum_probs=131.8

Q ss_pred             CCCCCChHHHHHHHHHHHHHHhhhhcCCCCceEecCCCCCceEECCCC-CceEeeecceeecCCCCCCCccccccccccc
Q 041793            3 RCKILDWPKRFHIICGTARGVMYLHQDSRLRIIHRDLKASNVLLDQDM-NPKISDFGLARAFGGDEIEGNTNRVIGTYGY   81 (224)
Q Consensus         3 ~~~~l~~~~~~~i~~qi~~~l~~Lh~~~~~~i~H~dl~~~nil~~~~~-~~kl~df~~~~~~~~~~~~~~~~~~~~~~~y   81 (224)
                      +++.|++..++.++.||+.|++|||++++  |+|||||++|+|++.++ ++||+|||+++......  .......||+.|
T Consensus       135 ~~~~l~~~~~l~~aldiArGm~YLH~~~~--iIHrDLK~~NiLv~~~~~~~KI~DFGlsr~~~~~~--~~~~~~~GT~~w  210 (362)
T KOG0192|consen  135 RKRKLPLKVRLRIALDIARGMEYLHSEGP--IIHRDLKSDNILVDLKGKTLKIADFGLSREKVISK--TSMTSVAGTYRW  210 (362)
T ss_pred             ccCCCCHHHHHHHHHHHHHHHHHHhcCCC--eeecccChhhEEEcCCCCEEEECCCccceeecccc--ccccCCCCCccc
Confidence            47899999999999999999999999984  89999999999999998 99999999998765432  223336789999


Q ss_pred             CCccccc--CCCcccccceEehhHHHHHHHhcccCCCCcCCCcccccccccCCCccccCccccCCcCHHHHHHHHHHHHH
Q 041793           82 MAPEYAS--DGKFSVKSDVFSFGILLLEIISGKKNRGFYHSDNKLNLIGHVSMPSQLIDPCIQGSFNLVEVIRCIHIGLL  159 (224)
Q Consensus        82 ~aPE~~~--~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~  159 (224)
                      +|||++.  ...++.|+||||||+++|||++|+.||...........+.....+..++..         -...+..||.+
T Consensus       211 MAPEv~~~~~~~~~~K~DvySFgIvlWEl~t~~~Pf~~~~~~~~~~~v~~~~~Rp~~p~~---------~~~~l~~l~~~  281 (362)
T KOG0192|consen  211 MAPEVLRGEKSPYTEKSDVYSFGIVLWELLTGEIPFEDLAPVQVASAVVVGGLRPPIPKE---------CPPHLSSLMER  281 (362)
T ss_pred             cChhhhcCCCCcCCccchhhhHHHHHHHHHHCCCCCCCCCHHHHHHHHHhcCCCCCCCcc---------CCHHHHHHHHH
Confidence            9999999  558999999999999999999999998765543222222211211221111         12346678889


Q ss_pred             hccCCCCCCCChHHHHHHhccC
Q 041793          160 CVQQHPKDRPSMPSVILMLGSE  181 (224)
Q Consensus       160 cl~~dp~~Rps~~~v~~~L~~~  181 (224)
                      ||..||++||++.+++..|+..
T Consensus       282 CW~~dp~~RP~f~ei~~~l~~~  303 (362)
T KOG0192|consen  282 CWLVDPSRRPSFLEIVSRLESI  303 (362)
T ss_pred             hCCCCCCcCCCHHHHHHHHHHH
Confidence            9999999999999999999754


No 3  
>KOG1187 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.98  E-value=2.4e-32  Score=223.88  Aligned_cols=174  Identities=42%  Similarity=0.753  Sum_probs=140.1

Q ss_pred             CCChHHHHHHHHHHHHHHhhhhcCCCCceEecCCCCCceEECCCCCceEeeecceeecCCCCCCCccccc-ccccccCCc
Q 041793            6 ILDWPKRFHIICGTARGVMYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDEIEGNTNRV-IGTYGYMAP   84 (224)
Q Consensus         6 ~l~~~~~~~i~~qi~~~l~~Lh~~~~~~i~H~dl~~~nil~~~~~~~kl~df~~~~~~~~~~~~~~~~~~-~~~~~y~aP   84 (224)
                      .|+|.+|++|+.++|.||+|||....++|+|||||++|||+|.++.+|++|||++......  ....... .|+..|++|
T Consensus       170 ~L~W~~R~kIa~g~A~gL~yLH~~~~~~iiHrDiKssNILLD~~~~aKlsDFGLa~~~~~~--~~~~~~~~~gt~gY~~P  247 (361)
T KOG1187|consen  170 PLDWETRLKIALGAARGLAYLHEGCPPPIIHRDIKSSNILLDEDFNAKLSDFGLAKLGPEG--DTSVSTTVMGTFGYLAP  247 (361)
T ss_pred             CCCHHHHHHHHHHHHHHHHHHccCCCCCEecCCCCHHHeeECCCCCEEccCccCcccCCcc--ccceeeecCCCCccCCh
Confidence            8999999999999999999999998778999999999999999999999999999654321  1111112 688999999


Q ss_pred             ccccCCCcccccceEehhHHHHHHHhcccCCCCcCCCcccccccc------cCCCccccCcccc-CCcCH-HHHHHHHHH
Q 041793           85 EYASDGKFSVKSDVFSFGILLLEIISGKKNRGFYHSDNKLNLIGH------VSMPSQLIDPCIQ-GSFNL-VEVIRCIHI  156 (224)
Q Consensus        85 E~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~------~~~~~~~~~~~~~-~~~~~-~~~~~~~~l  156 (224)
                      |+...+..+.|+||||||++++|+++|+.+.+.........+...      .....+++|+.+. ..+.. .++.++..+
T Consensus       248 Ey~~~g~lt~KsDVySFGVvllElitgr~~~d~~~~~~~~~l~~w~~~~~~~~~~~eiiD~~l~~~~~~~~~~~~~~~~~  327 (361)
T KOG1187|consen  248 EYASTGKLTEKSDVYSFGVVLLELITGRKAVDQSRPRGELSLVEWAKPLLEEGKLREIVDPRLKEGEYPDEKEVKKLAEL  327 (361)
T ss_pred             hhhccCCcCcccccccchHHHHHHHhCCcccCCCCCcccccHHHHHHHHHHCcchhheeCCCccCCCCChHHHHHHHHHH
Confidence            999999999999999999999999999987664332222211111      1134567788776 45554 678889999


Q ss_pred             HHHhccCCCCCCCChHHHHHHhccC
Q 041793          157 GLLCVQQHPKDRPSMPSVILMLGSE  181 (224)
Q Consensus       157 i~~cl~~dp~~Rps~~~v~~~L~~~  181 (224)
                      +.+|++.+|..||+|.+|++.|+..
T Consensus       328 a~~C~~~~~~~RP~m~~Vv~~L~~~  352 (361)
T KOG1187|consen  328 ALRCLRPDPKERPTMSQVVKELEGI  352 (361)
T ss_pred             HHHHcCcCCCcCcCHHHHHHHHHhh
Confidence            9999999999999999999999554


No 4  
>KOG0661 consensus MAPK related serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.97  E-value=1.7e-32  Score=221.84  Aligned_cols=170  Identities=21%  Similarity=0.280  Sum_probs=130.7

Q ss_pred             CCCCCCChHHHHHHHHHHHHHHhhhhcCCCCceEecCCCCCceEECCCCCceEeeecceeecCCCCCCCccccccccccc
Q 041793            2 ERCKILDWPKRFHIICGTARGVMYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDEIEGNTNRVIGTYGY   81 (224)
Q Consensus         2 ~~~~~l~~~~~~~i~~qi~~~l~~Lh~~~~~~i~H~dl~~~nil~~~~~~~kl~df~~~~~~~~~~~~~~~~~~~~~~~y   81 (224)
                      .+++.|+++.+..|+.||++||+|+|.+|   +.|||+||+|||+..+..+||+|||+|+....   ..-.+.++.|.+|
T Consensus       102 ~R~r~fse~~irnim~QilqGL~hiHk~G---fFHRDlKPENiLi~~~~~iKiaDFGLARev~S---kpPYTeYVSTRWY  175 (538)
T KOG0661|consen  102 DRNRLFSESDIRNIMYQILQGLAHIHKHG---FFHRDLKPENILISGNDVIKIADFGLAREVRS---KPPYTEYVSTRWY  175 (538)
T ss_pred             hcCCcCCHHHHHHHHHHHHHHHHHHHhcC---cccccCChhheEecccceeEeccccccccccc---CCCcchhhhcccc
Confidence            46899999999999999999999999999   99999999999999999999999999997643   2234557889999


Q ss_pred             CCccccc-CCCcccccceEehhHHHHHHHhcccCCCCcCCCcccccccccC-CC---------------ccccCc----c
Q 041793           82 MAPEYAS-DGKFSVKSDVFSFGILLLEIISGKKNRGFYHSDNKLNLIGHVS-MP---------------SQLIDP----C  140 (224)
Q Consensus        82 ~aPE~~~-~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~-~~---------------~~~~~~----~  140 (224)
                      +|||++. .+-|+.+.||||+|||++|+++-++.|.+....+....+..+. .+               ...+..    .
T Consensus       176 RAPEvLLrs~~Ys~pvD~wA~GcI~aEl~sLrPLFPG~sE~Dqi~KIc~VLGtP~~~~~~eg~~La~~mnf~~P~~~~~~  255 (538)
T KOG0661|consen  176 RAPEVLLRSGYYSSPVDMWAVGCIMAELYSLRPLFPGASEIDQIYKICEVLGTPDKDSWPEGYNLASAMNFRFPQVKPSP  255 (538)
T ss_pred             cchHHhhhccccCCchHHHHHHHHHHHHHHhcccCCCCcHHHHHHHHHHHhCCCccccchhHHHHHHHhccCCCcCCCCC
Confidence            9999875 4568999999999999999999888887665544433222211 00               000111    1


Q ss_pred             ccCCcCHHHHHHHHHHHHHhccCCCCCCCChHHHHHHh
Q 041793          141 IQGSFNLVEVIRCIHIGLLCVQQHPKDRPSMPSVILML  178 (224)
Q Consensus       141 ~~~~~~~~~~~~~~~li~~cl~~dp~~Rps~~~v~~~L  178 (224)
                      +....+. ....+++||.+|+.|||++|||+.++++.-
T Consensus       256 l~~L~p~-~s~~~~~li~~ll~WDP~kRpTA~~al~~p  292 (538)
T KOG0661|consen  256 LKDLLPN-ASSEAASLIERLLAWDPDKRPTASQALQHP  292 (538)
T ss_pred             hHHhCcc-cCHHHHHHHHHHhcCCCccCccHHHHhcCc
Confidence            1111111 234678899999999999999999999863


No 5  
>KOG0575 consensus Polo-like serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=99.97  E-value=4e-32  Score=225.44  Aligned_cols=159  Identities=27%  Similarity=0.420  Sum_probs=129.5

Q ss_pred             CCCCCChHHHHHHHHHHHHHHhhhhcCCCCceEecCCCCCceEECCCCCceEeeecceeecCCCCCCCcccccccccccC
Q 041793            3 RCKILDWPKRFHIICGTARGVMYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDEIEGNTNRVIGTYGYM   82 (224)
Q Consensus         3 ~~~~l~~~~~~~i~~qi~~~l~~Lh~~~~~~i~H~dl~~~nil~~~~~~~kl~df~~~~~~~~~~~~~~~~~~~~~~~y~   82 (224)
                      +++.|++.++..++.||+.||.|||+++   |+|||||.-|+|++.+.++|++|||+|..+.....  +..+.-||+.|.
T Consensus       111 rrk~ltEpEary~l~QIv~GlkYLH~~~---IiHRDLKLGNlfL~~~~~VKIgDFGLAt~le~~~E--rk~TlCGTPNYI  185 (592)
T KOG0575|consen  111 RRKPLTEPEARYFLRQIVEGLKYLHSLG---IIHRDLKLGNLFLNENMNVKIGDFGLATQLEYDGE--RKKTLCGTPNYI  185 (592)
T ss_pred             hcCCCCcHHHHHHHHHHHHHHHHHHhcC---ceecccchhheeecCcCcEEecccceeeeecCccc--ccceecCCCccc
Confidence            6789999999999999999999999999   99999999999999999999999999998864432  334467899999


Q ss_pred             CcccccCCCcccccceEehhHHHHHHHhcccCCCCcCCCcccccccccCCCccccCccccCCcCHHHHHHHHHHHHHhcc
Q 041793           83 APEYASDGKFSVKSDVFSFGILLLEIISGKKNRGFYHSDNKLNLIGHVSMPSQLIDPCIQGSFNLVEVIRCIHIGLLCVQ  162 (224)
Q Consensus        83 aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~  162 (224)
                      |||++...+.+..+||||+||++|.|+.|++||+...   ..+....+......++.    ..+    ....+||..+|+
T Consensus       186 APEVl~k~gHsfEvDiWSlGcvmYtLL~G~PPFetk~---vkety~~Ik~~~Y~~P~----~ls----~~A~dLI~~lL~  254 (592)
T KOG0575|consen  186 APEVLNKSGHSFEVDIWSLGCVMYTLLVGRPPFETKT---VKETYNKIKLNEYSMPS----HLS----AEAKDLIRKLLR  254 (592)
T ss_pred             ChhHhccCCCCCchhhhhhhhHHHhhhhCCCCcccch---HHHHHHHHHhcCccccc----ccC----HHHHHHHHHHhc
Confidence            9999998899999999999999999999999986533   22222222222222211    111    235678889999


Q ss_pred             CCCCCCCChHHHHHH
Q 041793          163 QHPKDRPSMPSVILM  177 (224)
Q Consensus       163 ~dp~~Rps~~~v~~~  177 (224)
                      .||.+|||+++|+..
T Consensus       255 ~~P~~Rpsl~~vL~h  269 (592)
T KOG0575|consen  255 PNPSERPSLDEVLDH  269 (592)
T ss_pred             CCcccCCCHHHHhcC
Confidence            999999999999874


No 6  
>KOG0591 consensus NIMA (never in mitosis)-related G2-specific serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=99.97  E-value=3e-32  Score=207.90  Aligned_cols=168  Identities=22%  Similarity=0.322  Sum_probs=134.7

Q ss_pred             CCCCCCChHHHHHHHHHHHHHHhhhhcCC-CCceEecCCCCCceEECCCCCceEeeecceeecCCCCCCCcccccccccc
Q 041793            2 ERCKILDWPKRFHIICGTARGVMYLHQDS-RLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDEIEGNTNRVIGTYG   80 (224)
Q Consensus         2 ~~~~~l~~~~~~~i~~qi~~~l~~Lh~~~-~~~i~H~dl~~~nil~~~~~~~kl~df~~~~~~~~~~~~~~~~~~~~~~~   80 (224)
                      ++++.+++.++|+++.|++.||..||..- ...|+||||||-||+++.+|.+||+|||+++++.....  .....+||+.
T Consensus       116 ~qkr~ipE~~Vwk~f~QL~~AL~~cH~~~~r~~VmHRDIKPaNIFl~~~gvvKLGDfGL~r~l~s~~t--fA~S~VGTPy  193 (375)
T KOG0591|consen  116 KQKRLIPEKTVWKYFVQLCRALYHCHSKIPRGTVMHRDIKPANIFLTANGVVKLGDFGLGRFLSSKTT--FAHSLVGTPY  193 (375)
T ss_pred             hccccCchHHHHHHHHHHHHHHHHHhccccccceeeccCcchheEEcCCCceeeccchhHhHhcchhH--HHHhhcCCCc
Confidence            57889999999999999999999999932 12399999999999999999999999999998865433  3455799999


Q ss_pred             cCCcccccCCCcccccceEehhHHHHHHHhcccCCCCcCCCcccccccccCCCccccCccccCCcCHHHHHHHHHHHHHh
Q 041793           81 YMAPEYASDGKFSVKSDVFSFGILLLEIISGKKNRGFYHSDNKLNLIGHVSMPSQLIDPCIQGSFNLVEVIRCIHIGLLC  160 (224)
Q Consensus        81 y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~c  160 (224)
                      |++||.+...+|+.++||||+||++|||..-..||.+.   +..++...+.....      +...+......+..||.-|
T Consensus       194 YMSPE~i~~~~Y~~kSDiWslGCllyEMcaL~~PF~g~---n~~~L~~KI~qgd~------~~~p~~~YS~~l~~li~~c  264 (375)
T KOG0591|consen  194 YMSPERIHESGYNFKSDIWSLGCLLYEMCALQSPFYGD---NLLSLCKKIEQGDY------PPLPDEHYSTDLRELINMC  264 (375)
T ss_pred             ccCHHHHhcCCCCcchhHHHHHHHHHHHHhcCCCcccc---cHHHHHHHHHcCCC------CCCcHHHhhhHHHHHHHHH
Confidence            99999999999999999999999999999999998654   44444444443321      2223344456678899999


Q ss_pred             ccCCCCCCCChHHHHHHhcc
Q 041793          161 VQQHPKDRPSMPSVILMLGS  180 (224)
Q Consensus       161 l~~dp~~Rps~~~v~~~L~~  180 (224)
                      +..||+.||+.-.++..+..
T Consensus       265 i~vd~~~RP~t~~~v~di~~  284 (375)
T KOG0591|consen  265 IAVDPEQRPDTVPYVQDIQS  284 (375)
T ss_pred             ccCCcccCCCcchHHHHHHH
Confidence            99999999996555555544


No 7  
>KOG0615 consensus Serine/threonine protein kinase Chk2 and related proteins [Cell cycle control, cell division, chromosome partitioning]
Probab=99.97  E-value=1.1e-31  Score=213.96  Aligned_cols=161  Identities=27%  Similarity=0.276  Sum_probs=125.3

Q ss_pred             CCCCChHHHHHHHHHHHHHHhhhhcCCCCceEecCCCCCceEECCC---CCceEeeecceeecCCCCCCCcccccccccc
Q 041793            4 CKILDWPKRFHIICGTARGVMYLHQDSRLRIIHRDLKASNVLLDQD---MNPKISDFGLARAFGGDEIEGNTNRVIGTYG   80 (224)
Q Consensus         4 ~~~l~~~~~~~i~~qi~~~l~~Lh~~~~~~i~H~dl~~~nil~~~~---~~~kl~df~~~~~~~~~~~~~~~~~~~~~~~   80 (224)
                      ++.+.+..-..++.|++.|+.|||++|   |+||||||+|||+..+   ..+|++|||++.....   .....+.-||+.
T Consensus       270 nk~l~ed~~K~~f~Qll~avkYLH~~G---I~HRDiKPeNILl~~~~e~~llKItDFGlAK~~g~---~sfm~TlCGTps  343 (475)
T KOG0615|consen  270 NKYLREDLGKLLFKQLLTAVKYLHSQG---IIHRDIKPENILLSNDAEDCLLKITDFGLAKVSGE---GSFMKTLCGTPS  343 (475)
T ss_pred             ccccccchhHHHHHHHHHHHHHHHHcC---cccccCCcceEEeccCCcceEEEecccchhhcccc---ceehhhhcCCcc
Confidence            466777888889999999999999999   9999999999999876   7789999999987642   223455779999


Q ss_pred             cCCcccccCCCcc---cccceEehhHHHHHHHhcccCCCCcCCCc-ccccccccCCCccccCccccCCcCHHHHHHHHHH
Q 041793           81 YMAPEYASDGKFS---VKSDVFSFGILLLEIISGKKNRGFYHSDN-KLNLIGHVSMPSQLIDPCIQGSFNLVEVIRCIHI  156 (224)
Q Consensus        81 y~aPE~~~~~~~~---~~~Di~slG~il~~l~~g~~p~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l  156 (224)
                      |.|||++.+.+..   .+.|+||+||++|-+++|.+||.....+. ..+.+....+...       ...+.+-..+..+|
T Consensus       344 YvAPEVl~~kg~~~~~~kVDiWSlGcvLfvcLsG~pPFS~~~~~~sl~eQI~~G~y~f~-------p~~w~~Iseea~dl  416 (475)
T KOG0615|consen  344 YVAPEVLASKGVEYYPSKVDIWSLGCVLFVCLSGYPPFSEEYTDPSLKEQILKGRYAFG-------PLQWDRISEEALDL  416 (475)
T ss_pred             ccChhheecCCeecccchheeeeccceEEEEeccCCCcccccCCccHHHHHhcCccccc-------ChhhhhhhHHHHHH
Confidence            9999999876543   47899999999999999999997544443 3333332222211       12223334567789


Q ss_pred             HHHhccCCCCCCCChHHHHHH
Q 041793          157 GLLCVQQHPKDRPSMPSVILM  177 (224)
Q Consensus       157 i~~cl~~dp~~Rps~~~v~~~  177 (224)
                      |.+||..||++|||+.|+++.
T Consensus       417 I~~mL~VdP~~R~s~~eaL~h  437 (475)
T KOG0615|consen  417 INWMLVVDPENRPSADEALNH  437 (475)
T ss_pred             HHHhhEeCcccCcCHHHHhcC
Confidence            999999999999999999863


No 8  
>KOG0197 consensus Tyrosine kinases [Signal transduction mechanisms]
Probab=99.97  E-value=5.7e-31  Score=215.85  Aligned_cols=165  Identities=33%  Similarity=0.490  Sum_probs=128.8

Q ss_pred             CCCCCChHHHHHHHHHHHHHHhhhhcCCCCceEecCCCCCceEECCCCCceEeeecceeecCCCCCCCcccccccccccC
Q 041793            3 RCKILDWPKRFHIICGTARGVMYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDEIEGNTNRVIGTYGYM   82 (224)
Q Consensus         3 ~~~~l~~~~~~~i~~qi~~~l~~Lh~~~~~~i~H~dl~~~nil~~~~~~~kl~df~~~~~~~~~~~~~~~~~~~~~~~y~   82 (224)
                      .++.++..+.+.++.|||+|++||++++   +|||||.+.|||++.+..+|++|||+++...+........ .--++.|.
T Consensus       296 ~~~~l~~~~Ll~~a~qIaeGM~YLes~~---~IHRDLAARNiLV~~~~~vKIsDFGLAr~~~d~~Y~~~~~-~kfPIkWt  371 (468)
T KOG0197|consen  296 EGGLLNLPQLLDFAAQIAEGMAYLESKN---YIHRDLAARNILVDEDLVVKISDFGLARLIGDDEYTASEG-GKFPIKWT  371 (468)
T ss_pred             CCCccchHHHHHHHHHHHHHHHHHHhCC---ccchhhhhhheeeccCceEEEcccccccccCCCceeecCC-CCCCceec
Confidence            5688999999999999999999999999   9999999999999999999999999999543322111111 12356899


Q ss_pred             CcccccCCCcccccceEehhHHHHHHHh-cccCCCCcCCCcccccccccCCCccccCccccCCcCHHHHHHHHHHHHHhc
Q 041793           83 APEYASDGKFSVKSDVFSFGILLLEIIS-GKKNRGFYHSDNKLNLIGHVSMPSQLIDPCIQGSFNLVEVIRCIHIGLLCV  161 (224)
Q Consensus        83 aPE~~~~~~~~~~~Di~slG~il~~l~~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl  161 (224)
                      |||.+....++.|+||||||+++||++| |+.||......+..+   .+.....++.|..   .+    ..+.+||+.||
T Consensus       372 APEa~~~~~FS~kSDVWSFGVlL~E~fT~G~~py~~msn~ev~~---~le~GyRlp~P~~---CP----~~vY~lM~~CW  441 (468)
T KOG0197|consen  372 APEALNYGKFSSKSDVWSFGVLLWELFTYGRVPYPGMSNEEVLE---LLERGYRLPRPEG---CP----DEVYELMKSCW  441 (468)
T ss_pred             CHHHHhhCCcccccceeehhhhHHHHhccCCCCCCCCCHHHHHH---HHhccCcCCCCCC---CC----HHHHHHHHHHh
Confidence            9999999999999999999999999997 677765555444443   3333333333322   11    13567889999


Q ss_pred             cCCCCCCCChHHHHHHhccC
Q 041793          162 QQHPKDRPSMPSVILMLGSE  181 (224)
Q Consensus       162 ~~dp~~Rps~~~v~~~L~~~  181 (224)
                      +.+|++||||+.+...|+..
T Consensus       442 ~~~P~~RPtF~~L~~~l~~~  461 (468)
T KOG0197|consen  442 HEDPEDRPTFETLREVLEDF  461 (468)
T ss_pred             hCCcccCCCHHHHHHHHHHh
Confidence            99999999999998888654


No 9  
>cd05102 PTKc_VEGFR3 Catalytic domain of the Protein Tyrosine Kinase, Vascular Endothelial Growth Factor Receptor 3. Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor 3 (VEGFR3); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR3 (or Flt4) is a member of the VEGFR subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. In VEGFR3, the fifth Ig-like domain is replaced by a disulfide bridge. The binding of VEGFRs to their ligands, the VEGFs, leads to receptor dimerization, activation, and intracellular signaling. V
Probab=99.97  E-value=9.5e-31  Score=214.17  Aligned_cols=166  Identities=30%  Similarity=0.399  Sum_probs=124.5

Q ss_pred             CCCCChHHHHHHHHHHHHHHhhhhcCCCCceEecCCCCCceEECCCCCceEeeecceeecCCCCCCCcccccccccccCC
Q 041793            4 CKILDWPKRFHIICGTARGVMYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDEIEGNTNRVIGTYGYMA   83 (224)
Q Consensus         4 ~~~l~~~~~~~i~~qi~~~l~~Lh~~~~~~i~H~dl~~~nil~~~~~~~kl~df~~~~~~~~~~~~~~~~~~~~~~~y~a   83 (224)
                      ...+++.+++.++.||+.||.|||+.|   |+||||||+||+++.++.++|+|||++................++..|+|
T Consensus       168 ~~~l~~~~~~~~~~qi~~aL~~LH~~~---ivHrDiKp~Nil~~~~~~~kl~DfG~a~~~~~~~~~~~~~~~~~~~~y~a  244 (338)
T cd05102         168 KSPLTMEDLICYSFQVARGMEFLASRK---CIHRDLAARNILLSENNVVKICDFGLARDIYKDPDYVRKGSARLPLKWMA  244 (338)
T ss_pred             cCCCCHHHHHHHHHHHHHHHHHHHHCC---EECCCCccceEEEcCCCcEEEeecccccccccCcchhcccCCCCCccccC
Confidence            356899999999999999999999999   99999999999999999999999999976532211111122334568999


Q ss_pred             cccccCCCcccccceEehhHHHHHHHh-cccCCCCcCCCcccccccccCCCccccCccccCCcCHHHHHHHHHHHHHhcc
Q 041793           84 PEYASDGKFSVKSDVFSFGILLLEIIS-GKKNRGFYHSDNKLNLIGHVSMPSQLIDPCIQGSFNLVEVIRCIHIGLLCVQ  162 (224)
Q Consensus        84 PE~~~~~~~~~~~Di~slG~il~~l~~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~  162 (224)
                      ||.+.+..++.++||||||+++|+|++ |..||........  .......... .  ......    ...+.+|+.+||+
T Consensus       245 PE~~~~~~~~~~sDiwslG~il~el~~~g~~pf~~~~~~~~--~~~~~~~~~~-~--~~~~~~----~~~l~~li~~cl~  315 (338)
T cd05102         245 PESIFDKVYTTQSDVWSFGVLLWEIFSLGASPYPGVQINEE--FCQRLKDGTR-M--RAPENA----TPEIYRIMLACWQ  315 (338)
T ss_pred             cHHhhcCCCCcccCHHHHHHHHHHHHhCCCCCCCCCCccHH--HHHHHhcCCC-C--CCCCCC----CHHHHHHHHHHcc
Confidence            999988889999999999999999997 9999865332211  1111100000 0  001111    1246789999999


Q ss_pred             CCCCCCCChHHHHHHhccC
Q 041793          163 QHPKDRPSMPSVILMLGSE  181 (224)
Q Consensus       163 ~dp~~Rps~~~v~~~L~~~  181 (224)
                      .||++|||+.+|++.|+..
T Consensus       316 ~dp~~RPs~~el~~~l~~~  334 (338)
T cd05102         316 GDPKERPTFSALVEILGDL  334 (338)
T ss_pred             CChhhCcCHHHHHHHHHHH
Confidence            9999999999999999764


No 10 
>KOG0593 consensus Predicted protein kinase KKIAMRE [General function prediction only]
Probab=99.97  E-value=4.2e-31  Score=203.49  Aligned_cols=167  Identities=21%  Similarity=0.298  Sum_probs=127.4

Q ss_pred             CCCChHHHHHHHHHHHHHHhhhhcCCCCceEecCCCCCceEECCCCCceEeeecceeecCCCCCCCcccccccccccCCc
Q 041793            5 KILDWPKRFHIICGTARGVMYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDEIEGNTNRVIGTYGYMAP   84 (224)
Q Consensus         5 ~~l~~~~~~~i~~qi~~~l~~Lh~~~~~~i~H~dl~~~nil~~~~~~~kl~df~~~~~~~~~~~~~~~~~~~~~~~y~aP   84 (224)
                      ..++.+.+..++.|++.|+.|||+++   ++||||||+||++..+|.+||+|||+|+.+..  .....+.++.|.+|+||
T Consensus        96 ~G~~~~~vk~~l~Q~l~ai~~cHk~n---~IHRDIKPENILit~~gvvKLCDFGFAR~L~~--pgd~YTDYVATRWYRaP  170 (396)
T KOG0593|consen   96 NGVPSELVKKYLYQLLKAIHFCHKNN---CIHRDIKPENILITQNGVVKLCDFGFARTLSA--PGDNYTDYVATRWYRAP  170 (396)
T ss_pred             CCCCHHHHHHHHHHHHHHhhhhhhcC---eecccCChhheEEecCCcEEeccchhhHhhcC--CcchhhhhhhhhhccCh
Confidence            45678889999999999999999999   99999999999999999999999999998753  23345557889999999


Q ss_pred             ccccC-CCcccccceEehhHHHHHHHhcccCCCCcCCCcccccccccC-----------CCcc----ccCccccCCcCHH
Q 041793           85 EYASD-GKFSVKSDVFSFGILLLEIISGKKNRGFYHSDNKLNLIGHVS-----------MPSQ----LIDPCIQGSFNLV  148 (224)
Q Consensus        85 E~~~~-~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~-----------~~~~----~~~~~~~~~~~~~  148 (224)
                      |++.+ ..|....||||+||++.||++|.+.|.+..+.+....+....           ....    +.-+.....-+++
T Consensus       171 ELLvGDtqYG~pVDiWAiGCv~aEl~~G~pL~PG~SDiDQLy~I~ktLG~L~prhq~iF~~N~~F~Gv~lP~~~~~epLe  250 (396)
T KOG0593|consen  171 ELLVGDTQYGKPVDIWAIGCVFAELLTGEPLWPGRSDIDQLYLIRKTLGNLIPRHQSIFSSNPFFHGVRLPEPEHPEPLE  250 (396)
T ss_pred             hhhcccCcCCCcccchhhhHHHHHHhcCCcCCCCcchHHHHHHHHHHHcccCHHHHHHhccCCceeeeecCCCCCccchh
Confidence            99988 678999999999999999999999887666554443332111           0000    0011111111111


Q ss_pred             H-----HHHHHHHHHHhccCCCCCCCChHHHHH
Q 041793          149 E-----VIRCIHIGLLCVQQHPKDRPSMPSVIL  176 (224)
Q Consensus       149 ~-----~~~~~~li~~cl~~dp~~Rps~~~v~~  176 (224)
                      .     ..-++++++.||+.||++|++-++++.
T Consensus       251 ~k~p~~s~~~ld~~k~cL~~dP~~R~sc~qll~  283 (396)
T KOG0593|consen  251 RKYPKISNVLLDLLKKCLKMDPDDRLSCEQLLH  283 (396)
T ss_pred             hhcccchHHHHHHHHHHhcCCccccccHHHHhc
Confidence            1     124689999999999999999998875


No 11 
>KOG0588 consensus Serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=99.97  E-value=7.5e-31  Score=219.63  Aligned_cols=165  Identities=28%  Similarity=0.321  Sum_probs=134.2

Q ss_pred             CCCCCChHHHHHHHHHHHHHHhhhhcCCCCceEecCCCCCceEECCCCCceEeeecceeecCCCCCCCcccccccccccC
Q 041793            3 RCKILDWPKRFHIICGTARGVMYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDEIEGNTNRVIGTYGYM   82 (224)
Q Consensus         3 ~~~~l~~~~~~~i~~qi~~~l~~Lh~~~~~~i~H~dl~~~nil~~~~~~~kl~df~~~~~~~~~~~~~~~~~~~~~~~y~   82 (224)
                      ++++|++.+..+++.||+.|+.|||..+   |+|||+||+|++++..+++|++|||.|..-..+   ....+.-|+++|.
T Consensus       105 ~kG~l~e~eaa~ff~QIi~gv~yCH~~~---icHRDLKpENlLLd~~~nIKIADFGMAsLe~~g---klLeTSCGSPHYA  178 (786)
T KOG0588|consen  105 RKGPLPEREAAHFFRQILDGVSYCHAFN---ICHRDLKPENLLLDVKNNIKIADFGMASLEVPG---KLLETSCGSPHYA  178 (786)
T ss_pred             hhCCCCCHHHHHHHHHHHHHHHHHhhhc---ceeccCCchhhhhhcccCEeeeccceeecccCC---ccccccCCCcccC
Confidence            5789999999999999999999999999   999999999999999999999999999864433   2344467899999


Q ss_pred             CcccccCCCcc-cccceEehhHHHHHHHhcccCCCCcCCCcccccccccCCCccccCccccCCcCHHHHHHHHHHHHHhc
Q 041793           83 APEYASDGKFS-VKSDVFSFGILLLEIISGKKNRGFYHSDNKLNLIGHVSMPSQLIDPCIQGSFNLVEVIRCIHIGLLCV  161 (224)
Q Consensus        83 aPE~~~~~~~~-~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl  161 (224)
                      +||++.|.+|. .++||||.|+|||.|++|+.||+   +++...+..++.....-++...    .    ..+.+|+.+|+
T Consensus       179 ~PEIV~G~pYdG~~sDVWSCGVILfALLtG~LPFd---DdNir~LLlKV~~G~f~MPs~I----s----~eaQdLLr~ml  247 (786)
T KOG0588|consen  179 APEIVSGRPYDGRPSDVWSCGVILFALLTGKLPFD---DDNIRVLLLKVQRGVFEMPSNI----S----SEAQDLLRRML  247 (786)
T ss_pred             CchhhcCCCCCCCccccchhHHHHHHHHhCCCCCC---CccHHHHHHHHHcCcccCCCcC----C----HHHHHHHHHHh
Confidence            99999999996 88999999999999999999975   5666666655543333222111    1    23567888999


Q ss_pred             cCCCCCCCChHHHHHH--hccCCCC
Q 041793          162 QQHPKDRPSMPSVILM--LGSEIVL  184 (224)
Q Consensus       162 ~~dp~~Rps~~~v~~~--L~~~~~~  184 (224)
                      ..||++|.|+++|++.  |.+...+
T Consensus       248 ~VDp~~RiT~~eI~kHP~l~g~~~~  272 (786)
T KOG0588|consen  248 DVDPSTRITTEEILKHPFLSGYTSL  272 (786)
T ss_pred             ccCccccccHHHHhhCchhhcCCCC
Confidence            9999999999999885  4444433


No 12 
>KOG0578 consensus p21-activated serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.97  E-value=1.6e-30  Score=214.40  Aligned_cols=159  Identities=24%  Similarity=0.351  Sum_probs=128.1

Q ss_pred             CCChHHHHHHHHHHHHHHhhhhcCCCCceEecCCCCCceEECCCCCceEeeecceeecCCCCCCCcccccccccccCCcc
Q 041793            6 ILDWPKRFHIICGTARGVMYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDEIEGNTNRVIGTYGYMAPE   85 (224)
Q Consensus         6 ~l~~~~~~~i~~qi~~~l~~Lh~~~~~~i~H~dl~~~nil~~~~~~~kl~df~~~~~~~~~~~~~~~~~~~~~~~y~aPE   85 (224)
                      .+++.++..|+.+++.||+|||.+|   |+|||||.+||+++.+|.+||+|||++..+...... + .+.+||+.|+|||
T Consensus       365 ~~~E~qIA~Icre~l~aL~fLH~~g---IiHrDIKSDnILL~~~g~vKltDFGFcaqi~~~~~K-R-~TmVGTPYWMAPE  439 (550)
T KOG0578|consen  365 RMTEGQIAAICREILQGLKFLHARG---IIHRDIKSDNILLTMDGSVKLTDFGFCAQISEEQSK-R-STMVGTPYWMAPE  439 (550)
T ss_pred             cccHHHHHHHHHHHHHHHHHHHhcc---eeeeccccceeEeccCCcEEEeeeeeeeccccccCc-c-ccccCCCCccchh
Confidence            4789999999999999999999999   999999999999999999999999999887654332 2 2368999999999


Q ss_pred             cccCCCcccccceEehhHHHHHHHhcccCCCCcCCCcccccccccCCCccccCccccCCcCHHHHHHHHHHHHHhccCCC
Q 041793           86 YASDGKFSVKSDVFSFGILLLEIISGKKNRGFYHSDNKLNLIGHVSMPSQLIDPCIQGSFNLVEVIRCIHIGLLCVQQHP  165 (224)
Q Consensus        86 ~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dp  165 (224)
                      +.....|.++.||||||++++||+.|++||-...+-....++.....+..-..    +..    ...+.+++.+||+.|+
T Consensus       440 Vvtrk~YG~KVDIWSLGIMaIEMveGEPPYlnE~PlrAlyLIa~ng~P~lk~~----~kl----S~~~kdFL~~cL~~dv  511 (550)
T KOG0578|consen  440 VVTRKPYGPKVDIWSLGIMAIEMVEGEPPYLNENPLRALYLIATNGTPKLKNP----EKL----SPELKDFLDRCLVVDV  511 (550)
T ss_pred             hhhhcccCccccchhhhhHHHHHhcCCCCccCCChHHHHHHHhhcCCCCcCCc----ccc----CHHHHHHHHHHhhcch
Confidence            99999999999999999999999999999865444444444433332221111    111    2346678889999999


Q ss_pred             CCCCChHHHHHH
Q 041793          166 KDRPSMPSVILM  177 (224)
Q Consensus       166 ~~Rps~~~v~~~  177 (224)
                      ++|+++.|+|+.
T Consensus       512 ~~RasA~eLL~H  523 (550)
T KOG0578|consen  512 EQRASAKELLEH  523 (550)
T ss_pred             hcCCCHHHHhcC
Confidence            999999999874


No 13 
>KOG0198 consensus MEKK and related serine/threonine protein kinases [Signal transduction mechanisms]
Probab=99.97  E-value=4.8e-31  Score=209.77  Aligned_cols=162  Identities=27%  Similarity=0.411  Sum_probs=121.7

Q ss_pred             CCChHHHHHHHHHHHHHHhhhhcCCCCceEecCCCCCceEECC-CCCceEeeecceeecCC-CCCCCcccccccccccCC
Q 041793            6 ILDWPKRFHIICGTARGVMYLHQDSRLRIIHRDLKASNVLLDQ-DMNPKISDFGLARAFGG-DEIEGNTNRVIGTYGYMA   83 (224)
Q Consensus         6 ~l~~~~~~~i~~qi~~~l~~Lh~~~~~~i~H~dl~~~nil~~~-~~~~kl~df~~~~~~~~-~~~~~~~~~~~~~~~y~a   83 (224)
                      .|++..+..+..||++||+|||++|   |+|||||+.|||++. ++.+||+|||++..... ...........|++.|+|
T Consensus       113 ~l~E~~v~~ytr~iL~GL~ylHs~g---~vH~DiK~~NiLl~~~~~~~KlaDFG~a~~~~~~~~~~~~~~~~~Gtp~~ma  189 (313)
T KOG0198|consen  113 KLPEPLVRRYTRQILEGLAYLHSKG---IVHCDIKPANILLDPSNGDVKLADFGLAKKLESKGTKSDSELSVQGTPNYMA  189 (313)
T ss_pred             CCCHHHHHHHHHHHHHHHHHHHhCC---EeccCcccceEEEeCCCCeEEeccCccccccccccccccccccccCCccccC
Confidence            7999999999999999999999999   999999999999999 79999999999987653 111122334678999999


Q ss_pred             cccccCCC-cccccceEehhHHHHHHHhcccCCCCcCCCcccccccccCCCccccCccccCCcCHHHHHHHHHHHHHhcc
Q 041793           84 PEYASDGK-FSVKSDVFSFGILLLEIISGKKNRGFYHSDNKLNLIGHVSMPSQLIDPCIQGSFNLVEVIRCIHIGLLCVQ  162 (224)
Q Consensus        84 PE~~~~~~-~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~  162 (224)
                      ||.+.++. ...++|||||||++.||++|+.||..+  ......+-.+......+  ..+...+    ....+++..|++
T Consensus       190 PEvi~~g~~~~~~sDiWSlGCtVvEM~Tg~~PW~~~--~~~~~~~~~ig~~~~~P--~ip~~ls----~~a~~Fl~~C~~  261 (313)
T KOG0198|consen  190 PEVIRNGEVARRESDIWSLGCTVVEMLTGKPPWSEF--FEEAEALLLIGREDSLP--EIPDSLS----DEAKDFLRKCFK  261 (313)
T ss_pred             chhhcCCCcCCccchhhhcCCEEEeccCCCCcchhh--cchHHHHHHHhccCCCC--CCCcccC----HHHHHHHHHHhh
Confidence            99998633 335999999999999999999998764  11111111111111111  1111111    235678889999


Q ss_pred             CCCCCCCChHHHHHHh
Q 041793          163 QHPKDRPSMPSVILML  178 (224)
Q Consensus       163 ~dp~~Rps~~~v~~~L  178 (224)
                      .||++|||+.++++..
T Consensus       262 ~~p~~Rpta~eLL~hp  277 (313)
T KOG0198|consen  262 RDPEKRPTAEELLEHP  277 (313)
T ss_pred             cCcccCcCHHHHhhCh
Confidence            9999999999998865


No 14 
>KOG0592 consensus 3-phosphoinositide-dependent protein kinase (PDK1) [Signal transduction mechanisms]
Probab=99.97  E-value=1.7e-30  Score=213.15  Aligned_cols=162  Identities=23%  Similarity=0.338  Sum_probs=128.7

Q ss_pred             CCCCCChHHHHHHHHHHHHHHhhhhcCCCCceEecCCCCCceEECCCCCceEeeecceeecCCCCCC---------Cc--
Q 041793            3 RCKILDWPKRFHIICGTARGVMYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDEIE---------GN--   71 (224)
Q Consensus         3 ~~~~l~~~~~~~i~~qi~~~l~~Lh~~~~~~i~H~dl~~~nil~~~~~~~kl~df~~~~~~~~~~~~---------~~--   71 (224)
                      +-+.|++.....++.+|+.||+|||+.|   |+||||||+|||++.+|.++|+|||.|..+......         ..  
T Consensus       167 K~Gsfde~caR~YAAeIldAleylH~~G---IIHRDlKPENILLd~dmhikITDFGsAK~l~~~~~~~~~~~~~~~a~s~  243 (604)
T KOG0592|consen  167 KYGSFDETCARFYAAEILDALEYLHSNG---IIHRDLKPENILLDKDGHIKITDFGSAKILSPSQKSQENPVDPNQASSR  243 (604)
T ss_pred             HhCcchHHHHHHHHHHHHHHHHHHHhcC---ceeccCChhheeEcCCCcEEEeeccccccCChhhccccCccCcccccCc
Confidence            4578899999999999999999999999   999999999999999999999999999877532111         11  


Q ss_pred             ccccccccccCCcccccCCCcccccceEehhHHHHHHHhcccCCCCcCCCcccccccccCCCccccCccccCCcCHHHHH
Q 041793           72 TNRVIGTYGYMAPEYASDGKFSVKSDVFSFGILLLEIISGKKNRGFYHSDNKLNLIGHVSMPSQLIDPCIQGSFNLVEVI  151 (224)
Q Consensus        72 ~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  151 (224)
                      ...++||..|.+||++.....+..+|+|+|||++|.|+.|++||...........+....   .    ..+.+++    .
T Consensus       244 ~~SFVGTAeYVSPElL~~~~~~~~sDiWAlGCilyQmlaG~PPFra~NeyliFqkI~~l~---y----~fp~~fp----~  312 (604)
T KOG0592|consen  244 RSSFVGTAEYVSPELLNDSPAGPSSDLWALGCILYQMLAGQPPFRAANEYLIFQKIQALD---Y----EFPEGFP----E  312 (604)
T ss_pred             ccceeeeecccCHHHhcCCCCCcccchHHHHHHHHHHhcCCCCCccccHHHHHHHHHHhc---c----cCCCCCC----H
Confidence            144799999999999999999999999999999999999999987655433322221111   1    1122222    2


Q ss_pred             HHHHHHHHhccCCCCCCCChHHHHHHh
Q 041793          152 RCIHIGLLCVQQHPKDRPSMPSVILML  178 (224)
Q Consensus       152 ~~~~li~~cl~~dp~~Rps~~~v~~~L  178 (224)
                      .+.+|+.+.|..||.+|+++++|.+..
T Consensus       313 ~a~dLv~KLLv~dp~~Rlt~~qIk~Hp  339 (604)
T KOG0592|consen  313 DARDLIKKLLVRDPSDRLTSQQIKAHP  339 (604)
T ss_pred             HHHHHHHHHHccCccccccHHHHhhCc
Confidence            356888899999999999999998854


No 15 
>KOG0582 consensus Ste20-like serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.97  E-value=2.5e-30  Score=207.96  Aligned_cols=167  Identities=27%  Similarity=0.387  Sum_probs=127.3

Q ss_pred             CCChHHHHHHHHHHHHHHhhhhcCCCCceEecCCCCCceEECCCCCceEeeecceeecCCCCCCC-cc-cccccccccCC
Q 041793            6 ILDWPKRFHIICGTARGVMYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDEIEG-NT-NRVIGTYGYMA   83 (224)
Q Consensus         6 ~l~~~~~~~i~~qi~~~l~~Lh~~~~~~i~H~dl~~~nil~~~~~~~kl~df~~~~~~~~~~~~~-~~-~~~~~~~~y~a   83 (224)
                      .|++..+..|+.+++.||.|||.+|   .+|||||+.|||++.+|.+||+|||..-.+-..+... .. ..+.|+++|+|
T Consensus       122 Gl~E~~Ia~iLre~LkaL~YLH~~G---~IHRdvKAgnILi~~dG~VkLadFgvsa~l~~~G~R~~~rf~tfvgtp~wmA  198 (516)
T KOG0582|consen  122 GLEEASIATILREVLKALDYLHQNG---HIHRDVKAGNILIDSDGTVKLADFGVSASLFDSGDRQVTRFNTFVGTPCWMA  198 (516)
T ss_pred             cccHHHHHHHHHHHHHHHHHHHhcC---ceecccccccEEEcCCCcEEEcCceeeeeecccCceeeEeeccccCcccccC
Confidence            4788999999999999999999999   9999999999999999999999999876654433211 11 45689999999


Q ss_pred             ccccc--CCCcccccceEehhHHHHHHHhcccCCCCcCCCcccccccccCCCccccCccccCCcCHHHHHHHHHHHHHhc
Q 041793           84 PEYAS--DGKFSVKSDVFSFGILLLEIISGKKNRGFYHSDNKLNLIGHVSMPSQLIDPCIQGSFNLVEVIRCIHIGLLCV  161 (224)
Q Consensus        84 PE~~~--~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl  161 (224)
                      ||++.  ..+|+.|+||||||+...|+.+|..||+.+++.....+.-+.. +....-.......+-..-+.+.+++..||
T Consensus       199 PEvl~q~~~GYdfKaDIwSfGITA~ELA~G~aPf~k~pPmkvLl~tLqn~-pp~~~t~~~~~d~~k~~~ksf~e~i~~CL  277 (516)
T KOG0582|consen  199 PEVLMQQLHGYDFKADIWSFGITACELAHGHAPFSKYPPMKVLLLTLQND-PPTLLTSGLDKDEDKKFSKSFREMIALCL  277 (516)
T ss_pred             hHHhhhcccCccchhhhhhhhHHHHHHhcCCCCcccCChHHHHHHHhcCC-CCCcccccCChHHhhhhcHHHHHHHHHHh
Confidence            99964  3579999999999999999999999998877664432221111 11111111111222222346778899999


Q ss_pred             cCCCCCCCChHHHHH
Q 041793          162 QQHPKDRPSMPSVIL  176 (224)
Q Consensus       162 ~~dp~~Rps~~~v~~  176 (224)
                      +.||.+|||++++++
T Consensus       278 ~kDP~kRptAskLlk  292 (516)
T KOG0582|consen  278 VKDPSKRPTASKLLK  292 (516)
T ss_pred             hcCcccCCCHHHHhc
Confidence            999999999999987


No 16 
>KOG0583 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.97  E-value=3.6e-30  Score=211.59  Aligned_cols=158  Identities=26%  Similarity=0.323  Sum_probs=125.6

Q ss_pred             CCCCChHHHHHHHHHHHHHHhhhhcCCCCceEecCCCCCceEECCC-CCceEeeecceeecCCCCCCCcccccccccccC
Q 041793            4 CKILDWPKRFHIICGTARGVMYLHQDSRLRIIHRDLKASNVLLDQD-MNPKISDFGLARAFGGDEIEGNTNRVIGTYGYM   82 (224)
Q Consensus         4 ~~~l~~~~~~~i~~qi~~~l~~Lh~~~~~~i~H~dl~~~nil~~~~-~~~kl~df~~~~~~~~~~~~~~~~~~~~~~~y~   82 (224)
                      .++|++.....++.||++|++|||+.|   |+||||||+|++++.+ +++||+|||++....  .......+..|++.|+
T Consensus       114 ~g~l~E~~ar~~F~Qlisav~y~H~~g---i~HRDLK~ENilld~~~~~~Kl~DFG~s~~~~--~~~~~l~t~cGsp~Y~  188 (370)
T KOG0583|consen  114 KGRLKEDEARKYFRQLISAVAYCHSRG---IVHRDLKPENILLDGNEGNLKLSDFGLSAISP--GEDGLLKTFCGSPAYA  188 (370)
T ss_pred             cCCCChHHHHHHHHHHHHHHHHHHhCC---EeeCCCCHHHEEecCCCCCEEEeccccccccC--CCCCcccCCCCCcccC
Confidence            578999999999999999999999999   9999999999999999 999999999998763  1122344568899999


Q ss_pred             CcccccCCC-cc-cccceEehhHHHHHHHhcccCCCCcCCCcccccccccCCCccccCccccCCcCHHHHHHHHHHHHHh
Q 041793           83 APEYASDGK-FS-VKSDVFSFGILLLEIISGKKNRGFYHSDNKLNLIGHVSMPSQLIDPCIQGSFNLVEVIRCIHIGLLC  160 (224)
Q Consensus        83 aPE~~~~~~-~~-~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~c  160 (224)
                      |||++.+.. |. .++||||+|+++|.|++|..||+.   .+...+...+......+.....       ...+..|+.+|
T Consensus       189 aPEvl~~~~~Y~g~~aDvWS~GViLy~ml~G~~PF~d---~~~~~l~~ki~~~~~~~p~~~~-------S~~~~~Li~~m  258 (370)
T KOG0583|consen  189 APEVLSGKGTYSGKAADVWSLGVILYVLLCGRLPFDD---SNVPNLYRKIRKGEFKIPSYLL-------SPEARSLIEKM  258 (370)
T ss_pred             CHHHhCCCCCcCCchhhhhhhHHHHHHHHhCCCCCCC---ccHHHHHHHHhcCCccCCCCcC-------CHHHHHHHHHH
Confidence            999999888 86 889999999999999999999865   2222222222211111111111       23467888899


Q ss_pred             ccCCCCCCCChHHHHH
Q 041793          161 VQQHPKDRPSMPSVIL  176 (224)
Q Consensus       161 l~~dp~~Rps~~~v~~  176 (224)
                      |..||.+|+++.+|+.
T Consensus       259 L~~~P~~R~t~~~i~~  274 (370)
T KOG0583|consen  259 LVPDPSTRITLLEILE  274 (370)
T ss_pred             cCCCcccCCCHHHHhh
Confidence            9999999999999984


No 17 
>KOG0193 consensus Serine/threonine protein kinase RAF [Signal transduction mechanisms]
Probab=99.97  E-value=2.5e-30  Score=214.57  Aligned_cols=169  Identities=30%  Similarity=0.381  Sum_probs=129.9

Q ss_pred             CCCCChHHHHHHHHHHHHHHhhhhcCCCCceEecCCCCCceEECCCCCceEeeecceeecCCCCCCCcccccccccccCC
Q 041793            4 CKILDWPKRFHIICGTARGVMYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDEIEGNTNRVIGTYGYMA   83 (224)
Q Consensus         4 ~~~l~~~~~~~i~~qi~~~l~~Lh~~~~~~i~H~dl~~~nil~~~~~~~kl~df~~~~~~~~~~~~~~~~~~~~~~~y~a   83 (224)
                      ...|...+.++|+.||++|+.|||.++   |+|+|||..|||+..++.+|++|||++.....-..........++..|+|
T Consensus       482 etkfdm~~~idIAqQiaqGM~YLHAK~---IIHrDLKSnNIFl~~~~kVkIgDFGLatvk~~w~g~~q~~qp~gsilwmA  558 (678)
T KOG0193|consen  482 ETKFDMNTTIDIAQQIAQGMDYLHAKN---IIHRDLKSNNIFLHEDLKVKIGDFGLATVKTRWSGEQQLEQPHGSLLWMA  558 (678)
T ss_pred             hhhhhHHHHHHHHHHHHHhhhhhhhhh---hhhhhccccceEEccCCcEEEecccceeeeeeeccccccCCCccchhhhc
Confidence            356788899999999999999999999   99999999999999999999999999975432222223344578889999


Q ss_pred             cccccC---CCcccccceEehhHHHHHHHhcccCCCCcCCCcccccccccCCCccccCccccCCcCHHHHHHHHHHHHHh
Q 041793           84 PEYASD---GKFSVKSDVFSFGILLLEIISGKKNRGFYHSDNKLNLIGHVSMPSQLIDPCIQGSFNLVEVIRCIHIGLLC  160 (224)
Q Consensus        84 PE~~~~---~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~c  160 (224)
                      ||+++.   .+|++.+||||||+++|||++|..||.   ..+...++-.+....-.++.........   ..+.+|+..|
T Consensus       559 PEvIRmqd~nPfS~qSDVYaFGiV~YELltg~lPys---i~~~dqIifmVGrG~l~pd~s~~~s~~p---k~mk~Ll~~C  632 (678)
T KOG0193|consen  559 PEVIRMQDDNPFSFQSDVYAFGIVWYELLTGELPYS---IQNRDQIIFMVGRGYLMPDLSKIRSNCP---KAMKRLLSDC  632 (678)
T ss_pred             HHHHhhcccCCCCcccchhhhhHHHHHHHhCcCCcC---CCChhheEEEecccccCccchhhhccCH---HHHHHHHHHH
Confidence            999863   468999999999999999999999986   3334444433333322333322222222   2466788899


Q ss_pred             ccCCCCCCCChHHHHHHhccC
Q 041793          161 VQQHPKDRPSMPSVILMLGSE  181 (224)
Q Consensus       161 l~~dp~~Rps~~~v~~~L~~~  181 (224)
                      |..++++||.+.+|+..|+..
T Consensus       633 ~~~~~~eRP~F~~il~~l~~l  653 (678)
T KOG0193|consen  633 WKFDREERPLFPQLLSKLEEL  653 (678)
T ss_pred             HhcCcccCccHHHHHHHHHHh
Confidence            999999999999999977655


No 18 
>KOG0600 consensus Cdc2-related protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=99.96  E-value=5.4e-30  Score=208.67  Aligned_cols=169  Identities=24%  Similarity=0.306  Sum_probs=129.0

Q ss_pred             CCCCChHHHHHHHHHHHHHHhhhhcCCCCceEecCCCCCceEECCCCCceEeeecceeecCCCCCCCcccccccccccCC
Q 041793            4 CKILDWPKRFHIICGTARGVMYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDEIEGNTNRVIGTYGYMA   83 (224)
Q Consensus         4 ~~~l~~~~~~~i~~qi~~~l~~Lh~~~~~~i~H~dl~~~nil~~~~~~~kl~df~~~~~~~~~~~~~~~~~~~~~~~y~a   83 (224)
                      .-.|++.++..++.||+.||+|||++|   |+|||||.+|||++.+|.+||+|||+|+++...... ..+..+-|.+|+|
T Consensus       212 ~vkft~~qIKc~mkQLl~Gl~~cH~~g---vlHRDIK~SNiLidn~G~LKiaDFGLAr~y~~~~~~-~~T~rVvTLWYRp  287 (560)
T KOG0600|consen  212 GVKFTEPQIKCYMKQLLEGLEYCHSRG---VLHRDIKGSNILIDNNGVLKIADFGLARFYTPSGSA-PYTSRVVTLWYRP  287 (560)
T ss_pred             CcccChHHHHHHHHHHHHHHHHHhhcC---eeeccccccceEEcCCCCEEeccccceeeccCCCCc-ccccceEEeeccC
Confidence            457899999999999999999999999   999999999999999999999999999987654322 2444577999999


Q ss_pred             cccccCC-CcccccceEehhHHHHHHHhcccCCCCcCCCccccccccc--------C----CCc-cccCccccCCcCHHH
Q 041793           84 PEYASDG-KFSVKSDVFSFGILLLEIISGKKNRGFYHSDNKLNLIGHV--------S----MPS-QLIDPCIQGSFNLVE  149 (224)
Q Consensus        84 PE~~~~~-~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~--------~----~~~-~~~~~~~~~~~~~~~  149 (224)
                      ||++.|. .|+.+.|+||.|||+.||+.|++.|++....+....+-+.        |    ++. ..+.+.......+.+
T Consensus       288 PELLLG~t~Yg~aVDlWS~GCIl~El~~gkPI~~G~tEveQl~kIfklcGSP~e~~W~~~kLP~~~~~kp~~~y~r~l~E  367 (560)
T KOG0600|consen  288 PELLLGATSYGTAVDLWSVGCILAELFLGKPILQGRTEVEQLHKIFKLCGSPTEDYWPVSKLPHATIFKPQQPYKRRLRE  367 (560)
T ss_pred             hHHhcCCcccccceeehhhhHHHHHHHcCCCCcCCccHHHHHHHHHHHhCCCChhccccccCCcccccCCCCcccchHHH
Confidence            9999885 5899999999999999999999998776654443322111        1    111 011111111112222


Q ss_pred             H-----HHHHHHHHHhccCCCCCCCChHHHHH
Q 041793          150 V-----IRCIHIGLLCVQQHPKDRPSMPSVIL  176 (224)
Q Consensus       150 ~-----~~~~~li~~cl~~dp~~Rps~~~v~~  176 (224)
                      .     ...++|+..+|..||++|.|+.++++
T Consensus       368 ~~~~~~~~~l~Ll~~lL~ldP~kR~tA~~aL~  399 (560)
T KOG0600|consen  368 TFKDFPASALDLLEKLLSLDPDKRGTASSALQ  399 (560)
T ss_pred             HhccCCHHHHHHHHHHhccCccccccHHHHhc
Confidence            1     34578999999999999999999865


No 19 
>KOG2345 consensus Serine/threonine protein kinase/TGF-beta stimulated factor [Transcription; Lipid transport and metabolism; Signal transduction mechanisms]
Probab=99.96  E-value=1.1e-29  Score=190.65  Aligned_cols=170  Identities=22%  Similarity=0.235  Sum_probs=127.4

Q ss_pred             CCCCChHHHHHHHHHHHHHHhhhhcCCCCceEecCCCCCceEECCCCCceEeeecceeecCCCCCCC-------cccccc
Q 041793            4 CKILDWPKRFHIICGTARGVMYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDEIEG-------NTNRVI   76 (224)
Q Consensus         4 ~~~l~~~~~~~i~~qi~~~l~~Lh~~~~~~i~H~dl~~~nil~~~~~~~kl~df~~~~~~~~~~~~~-------~~~~~~   76 (224)
                      +..+++.+++.++.+|+.||++||+.. ++++|+||||.||++..++.+++.|||.++.........       ......
T Consensus       121 g~~~sE~~iL~if~gic~gL~~lH~~~-~~yAH~DiKP~NILls~~~~~vl~D~GS~~~a~i~i~~~~~a~~lQe~a~e~  199 (302)
T KOG2345|consen  121 GNFVSEAQILWIFLGICRGLEALHEKE-PPYAHRDIKPANILLSDSGLPVLMDLGSATQAPIQIEGSRQALRLQEWAEER  199 (302)
T ss_pred             CCccCHHHHHHHHHHHHHHHHHHhccC-CcccccCCCcceeEecCCCceEEEeccCccccceEeechHHHHHHHHHHHHh
Confidence            447899999999999999999999997 459999999999999999999999999998654321111       112246


Q ss_pred             cccccCCcccccC---CCcccccceEehhHHHHHHHhcccCCCCcCCCcccccccccCCCccccCccccCCcCHHHHHHH
Q 041793           77 GTYGYMAPEYASD---GKFSVKSDVFSFGILLLEIISGKKNRGFYHSDNKLNLIGHVSMPSQLIDPCIQGSFNLVEVIRC  153 (224)
Q Consensus        77 ~~~~y~aPE~~~~---~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  153 (224)
                      ++..|+|||++.-   ...+.++|||||||++|.|+.|..||+.... ....+.--+...+..+ +     .+......+
T Consensus       200 Ct~pyRAPELf~vk~~~ti~ertDIWSLGCtLYa~mf~~sPfe~~~~-~GgSlaLAv~n~q~s~-P-----~~~~yse~l  272 (302)
T KOG2345|consen  200 CTIPYRAPELFNVKSHCTITERTDIWSLGCTLYAMMFGESPFERIYQ-QGGSLALAVQNAQISI-P-----NSSRYSEAL  272 (302)
T ss_pred             CCCcccCchheecccCcccccccchhhhhHHHHHHHHcCCcchHHhh-cCCeEEEeeecccccc-C-----CCCCccHHH
Confidence            7889999999853   3467999999999999999999999976443 2222221111111111 1     111133467


Q ss_pred             HHHHHHhccCCCCCCCChHHHHHHhccC
Q 041793          154 IHIGLLCVQQHPKDRPSMPSVILMLGSE  181 (224)
Q Consensus       154 ~~li~~cl~~dp~~Rps~~~v~~~L~~~  181 (224)
                      .+++++|++.||.+||++.+++..+...
T Consensus       273 ~~lik~mlqvdP~qRP~i~~ll~~~d~L  300 (302)
T KOG2345|consen  273 HQLIKSMLQVDPNQRPTIPELLSKLDDL  300 (302)
T ss_pred             HHHHHHHhcCCcccCCCHHHHHHHHHhh
Confidence            7899999999999999999999888654


No 20 
>KOG0660 consensus Mitogen-activated protein kinase [Signal transduction mechanisms]
Probab=99.96  E-value=3.7e-30  Score=202.24  Aligned_cols=172  Identities=27%  Similarity=0.300  Sum_probs=127.8

Q ss_pred             CCCCCChHHHHHHHHHHHHHHhhhhcCCCCceEecCCCCCceEECCCCCceEeeecceeecCCCCCCCcccccccccccC
Q 041793            3 RCKILDWPKRFHIICGTARGVMYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDEIEGNTNRVIGTYGYM   82 (224)
Q Consensus         3 ~~~~l~~~~~~~i~~qi~~~l~~Lh~~~~~~i~H~dl~~~nil~~~~~~~kl~df~~~~~~~~~~~~~~~~~~~~~~~y~   82 (224)
                      +.+.|+....-.+++||+.||+|+|+.+   ++||||||.|++++.+..+|++|||+|+...........+.++.|.+|+
T Consensus       118 ~~~~L~d~H~q~f~YQiLrgLKyiHSAn---ViHRDLKPsNll~n~~c~lKI~DFGLAR~~~~~~~~~~mTeYVaTRWYR  194 (359)
T KOG0660|consen  118 SQQDLTDDHAQYFLYQILRGLKYIHSAN---VIHRDLKPSNLLLNADCDLKICDFGLARYLDKFFEDGFMTEYVATRWYR  194 (359)
T ss_pred             cCccccHHHHHHHHHHHHHhcchhhccc---ccccccchhheeeccCCCEEeccccceeeccccCcccchhcceeeeeec
Confidence            3445899999999999999999999999   9999999999999999999999999999875432233345577899999


Q ss_pred             Cccccc-CCCcccccceEehhHHHHHHHhcccCCCCcCCCccccccccc-CCCcccc-------------C-ccccCCcC
Q 041793           83 APEYAS-DGKFSVKSDVFSFGILLLEIISGKKNRGFYHSDNKLNLIGHV-SMPSQLI-------------D-PCIQGSFN  146 (224)
Q Consensus        83 aPE~~~-~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~-~~~~~~~-------------~-~~~~~~~~  146 (224)
                      |||++. ...|+.+.||||+|||+.||++|++.|.+.+......++... ..+....             . .......+
T Consensus       195 APElll~~~~Yt~aiDiWSvGCI~AEmL~gkplFpG~d~v~Ql~lI~~~lGtP~~e~l~~i~s~~ar~yi~slp~~p~~~  274 (359)
T KOG0660|consen  195 APELLLNSSEYTKAIDIWSVGCILAEMLTGKPLFPGKDYVHQLQLILELLGTPSEEDLQKIRSEKARPYIKSLPQIPKQP  274 (359)
T ss_pred             CHHHHhccccccchhhhhhhhHHHHHHHcCCCCCCCCchHHHHHHHHHhcCCCCHHHHHHhccHHHHHHHHhCCCCCCCC
Confidence            999875 456899999999999999999999998776544443333211 1000000             0 00000001


Q ss_pred             HHH-----HHHHHHHHHHhccCCCCCCCChHHHHHH
Q 041793          147 LVE-----VIRCIHIGLLCVQQHPKDRPSMPSVILM  177 (224)
Q Consensus       147 ~~~-----~~~~~~li~~cl~~dp~~Rps~~~v~~~  177 (224)
                      ...     -...++|+.+||..||.+|+|++|+++.
T Consensus       275 f~~~fp~a~p~AidLlekmL~fdP~kRita~eAL~h  310 (359)
T KOG0660|consen  275 FSSIFPNANPLAIDLLEKMLVFDPKKRITAEEALAH  310 (359)
T ss_pred             HHHHcCCCCHHHHHHHHHHhccCccccCCHHHHhcC
Confidence            110     1235788999999999999999999874


No 21 
>cd05096 PTKc_DDR1 Catalytic domain of the Protein Tyrosine Kinase, Discoidin Domain Receptor 1. Protein Tyrosine Kinase (PTK) family; mammalian Discoidin Domain Receptor 1 (DDR1) and homologs; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR1 is a member of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDR1 binds to all collagens tested to date (types I-IV). It is widely expressed in many tissues. It is abundant in the brain and is also found in k
Probab=99.96  E-value=5.3e-30  Score=206.78  Aligned_cols=168  Identities=24%  Similarity=0.377  Sum_probs=121.5

Q ss_pred             CCCChHHHHHHHHHHHHHHhhhhcCCCCceEecCCCCCceEECCCCCceEeeecceeecCCCCCCCcccccccccccCCc
Q 041793            5 KILDWPKRFHIICGTARGVMYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDEIEGNTNRVIGTYGYMAP   84 (224)
Q Consensus         5 ~~l~~~~~~~i~~qi~~~l~~Lh~~~~~~i~H~dl~~~nil~~~~~~~kl~df~~~~~~~~~~~~~~~~~~~~~~~y~aP   84 (224)
                      ..+++.+++.++.||+.||.|||+.|   |+|+||||+||+++.++.+||+|||++................++..|+||
T Consensus       133 ~~~~~~~~~~i~~~i~~al~~lH~~~---ivH~dlkp~Nill~~~~~~kl~DfG~~~~~~~~~~~~~~~~~~~~~~y~aP  209 (304)
T cd05096         133 PAISYSSLLHVALQIASGMKYLSSLN---FVHRDLATRNCLVGENLTIKIADFGMSRNLYAGDYYRIQGRAVLPIRWMAW  209 (304)
T ss_pred             ccccHHHHHHHHHHHHHHHHHHHHCC---ccccCcchhheEEcCCccEEECCCccceecccCceeEecCcCCCCccccCH
Confidence            45788999999999999999999999   999999999999999999999999999865433221112223446789999


Q ss_pred             ccccCCCcccccceEehhHHHHHHHh--cccCCCCcCCCcccccccccCCCc-cccCccccCCcCHHHHHHHHHHHHHhc
Q 041793           85 EYASDGKFSVKSDVFSFGILLLEIIS--GKKNRGFYHSDNKLNLIGHVSMPS-QLIDPCIQGSFNLVEVIRCIHIGLLCV  161 (224)
Q Consensus        85 E~~~~~~~~~~~Di~slG~il~~l~~--g~~p~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~li~~cl  161 (224)
                      |.+.+..++.++|+||||+++|+|++  +..||................... ...........    ...+.+|+.+||
T Consensus       210 E~~~~~~~~~~~Dv~slG~~l~el~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~li~~cl  285 (304)
T cd05096         210 ECILMGKFTTASDVWAFGVTLWEILMLCKEQPYGELTDEQVIENAGEFFRDQGRQVYLFRPPPC----PQGLYELMLQCW  285 (304)
T ss_pred             HHHhcCCCCchhhhHHHHHHHHHHHHccCCCCCCcCCHHHHHHHHHHHhhhccccccccCCCCC----CHHHHHHHHHHc
Confidence            99988889999999999999999986  456665433222211111100000 00000000011    134678999999


Q ss_pred             cCCCCCCCChHHHHHHhc
Q 041793          162 QQHPKDRPSMPSVILMLG  179 (224)
Q Consensus       162 ~~dp~~Rps~~~v~~~L~  179 (224)
                      +.||++|||+.+|.+.|+
T Consensus       286 ~~~p~~RPs~~~i~~~l~  303 (304)
T cd05096         286 SRDCRERPSFSDIHAFLT  303 (304)
T ss_pred             cCCchhCcCHHHHHHHHh
Confidence            999999999999999885


No 22 
>cd05106 PTKc_CSF-1R Catalytic domain of the Protein Tyrosine Kinase, Colony-Stimulating Factor-1 Receptor. Protein Tyrosine Kinase (PTK) family; Colony-Stimulating Factor-1 Receptor (CSF-1R); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. CSF-1R, also called c-Fms, is a member of the Platelet Derived Growth Factor Receptor (PDGFR) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of CSF-1R to its ligand, CSF-1, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. CSF-1R signaling is criti
Probab=99.96  E-value=9.5e-30  Score=211.05  Aligned_cols=166  Identities=30%  Similarity=0.373  Sum_probs=124.3

Q ss_pred             CCCCChHHHHHHHHHHHHHHhhhhcCCCCceEecCCCCCceEECCCCCceEeeecceeecCCCCCCCcccccccccccCC
Q 041793            4 CKILDWPKRFHIICGTARGVMYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDEIEGNTNRVIGTYGYMA   83 (224)
Q Consensus         4 ~~~l~~~~~~~i~~qi~~~l~~Lh~~~~~~i~H~dl~~~nil~~~~~~~kl~df~~~~~~~~~~~~~~~~~~~~~~~y~a   83 (224)
                      ...+++.+++.++.||+.||.|||+.|   |+||||||+||+++.++.++|+|||++................++..|+|
T Consensus       206 ~~~l~~~~~~~i~~qi~~aL~yLH~~g---iiHrDLkp~Nil~~~~~~~kL~DfGla~~~~~~~~~~~~~~~~~~~~y~a  282 (374)
T cd05106         206 SWPLDLDDLLRFSSQVAQGMDFLASKN---CIHRDVAARNVLLTDGRVAKICDFGLARDIMNDSNYVVKGNARLPVKWMA  282 (374)
T ss_pred             CCCcCHHHHHHHHHHHHHHHHHHHHCC---EEeccCchheEEEeCCCeEEEeeceeeeeccCCcceeeccCCCCccceeC
Confidence            356899999999999999999999999   99999999999999999999999999976543221111112234567999


Q ss_pred             cccccCCCcccccceEehhHHHHHHHh-cccCCCCcCCCcccccccccCCCccccCccccCCcCHHHHHHHHHHHHHhcc
Q 041793           84 PEYASDGKFSVKSDVFSFGILLLEIIS-GKKNRGFYHSDNKLNLIGHVSMPSQLIDPCIQGSFNLVEVIRCIHIGLLCVQ  162 (224)
Q Consensus        84 PE~~~~~~~~~~~Di~slG~il~~l~~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~  162 (224)
                      ||.+.+..++.++|+||||+++|+|++ |+.||.........  ...........   .....    ...+.+++.+||+
T Consensus       283 PE~~~~~~~~~~~DvwSlGvil~ellt~G~~Pf~~~~~~~~~--~~~~~~~~~~~---~~~~~----~~~l~~li~~cl~  353 (374)
T cd05106         283 PESIFDCVYTVQSDVWSYGILLWEIFSLGKSPYPGILVNSKF--YKMVKRGYQMS---RPDFA----PPEIYSIMKMCWN  353 (374)
T ss_pred             HHHhcCCCCCccccHHHHHHHHHHHHhCCCCCCccccccHHH--HHHHHcccCcc---CCCCC----CHHHHHHHHHHcC
Confidence            999988889999999999999999997 99998654322111  11110000000   01111    1346788899999


Q ss_pred             CCCCCCCChHHHHHHhccC
Q 041793          163 QHPKDRPSMPSVILMLGSE  181 (224)
Q Consensus       163 ~dp~~Rps~~~v~~~L~~~  181 (224)
                      .||++|||+.+|++.|+..
T Consensus       354 ~dp~~RPs~~~l~~~l~~~  372 (374)
T cd05106         354 LEPTERPTFSQISQLIQRQ  372 (374)
T ss_pred             CChhhCcCHHHHHHHHHHH
Confidence            9999999999999999764


No 23 
>cd05048 PTKc_Ror Catalytic Domain of the Protein Tyrosine Kinases, Receptor tyrosine kinase-like Orphan Receptors. Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor (Ror) subfamily; catalytic (c) domain. The Ror subfamily consists of Ror1, Ror2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimer
Probab=99.96  E-value=1.1e-29  Score=202.63  Aligned_cols=163  Identities=29%  Similarity=0.446  Sum_probs=125.7

Q ss_pred             CCCChHHHHHHHHHHHHHHhhhhcCCCCceEecCCCCCceEECCCCCceEeeecceeecCCCCCCCcccccccccccCCc
Q 041793            5 KILDWPKRFHIICGTARGVMYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDEIEGNTNRVIGTYGYMAP   84 (224)
Q Consensus         5 ~~l~~~~~~~i~~qi~~~l~~Lh~~~~~~i~H~dl~~~nil~~~~~~~kl~df~~~~~~~~~~~~~~~~~~~~~~~y~aP   84 (224)
                      +.+++.+++.++.||+.||.|||+.+   ++|+||+|+||+++.++.++|+|||++................++..|+||
T Consensus       119 ~~l~~~~~~~~~~~l~~al~~lH~~~---i~H~dlkp~Nil~~~~~~~~L~dfg~~~~~~~~~~~~~~~~~~~~~~y~aP  195 (283)
T cd05048         119 SSLDCSDFLHIAIQIAAGMEYLSSHH---FVHRDLAARNCLVGEGLTVKISDFGLSRDIYSADYYRVQSKSLLPVRWMPP  195 (283)
T ss_pred             CCCCHHHHHHHHHHHHHHHHHHHhCC---eeccccccceEEEcCCCcEEECCCcceeeccccccccccCCCcccccccCH
Confidence            67899999999999999999999999   999999999999999999999999998765332211122223456789999


Q ss_pred             ccccCCCcccccceEehhHHHHHHHh-cccCCCCcCCCcccccccccCCCccccCccccCCcCHHHHHHHHHHHHHhccC
Q 041793           85 EYASDGKFSVKSDVFSFGILLLEIIS-GKKNRGFYHSDNKLNLIGHVSMPSQLIDPCIQGSFNLVEVIRCIHIGLLCVQQ  163 (224)
Q Consensus        85 E~~~~~~~~~~~Di~slG~il~~l~~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~  163 (224)
                      |.+.+..++.++|+|||||++|+|++ |..||......+....+...... .     .....    ...+.+|+.+||+.
T Consensus       196 E~~~~~~~~~~sDv~slG~il~el~~~g~~p~~~~~~~~~~~~i~~~~~~-~-----~~~~~----~~~~~~l~~~c~~~  265 (283)
T cd05048         196 EAILYGKFTTESDIWSFGVVLWEIFSYGLQPYYGFSNQEVIEMIRSRQLL-P-----CPEDC----PARVYALMIECWNE  265 (283)
T ss_pred             HHhccCcCchhhhHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHHcCCcC-C-----CcccC----CHHHHHHHHHHccC
Confidence            99988889999999999999999997 98888654433322222111110 0     11111    13577899999999


Q ss_pred             CCCCCCChHHHHHHhcc
Q 041793          164 HPKDRPSMPSVILMLGS  180 (224)
Q Consensus       164 dp~~Rps~~~v~~~L~~  180 (224)
                      ||++||++.+|++.|+.
T Consensus       266 ~p~~Rp~~~~i~~~l~~  282 (283)
T cd05048         266 IPARRPRFKDIHTRLRS  282 (283)
T ss_pred             ChhhCcCHHHHHHHHhc
Confidence            99999999999999864


No 24 
>KOG0598 consensus Ribosomal protein S6 kinase and related proteins [General function prediction only; Signal transduction mechanisms]
Probab=99.96  E-value=3.5e-30  Score=203.00  Aligned_cols=151  Identities=27%  Similarity=0.331  Sum_probs=119.4

Q ss_pred             CCCCCChHHHHHHHHHHHHHHhhhhcCCCCceEecCCCCCceEECCCCCceEeeecceeecCCCCCCCcccccccccccC
Q 041793            3 RCKILDWPKRFHIICGTARGVMYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDEIEGNTNRVIGTYGYM   82 (224)
Q Consensus         3 ~~~~l~~~~~~~i~~qi~~~l~~Lh~~~~~~i~H~dl~~~nil~~~~~~~kl~df~~~~~~~~~~~~~~~~~~~~~~~y~   82 (224)
                      +.+.+++..+.-++++|+.||.|||++|   |+||||||+||+++.+|.++|+|||++......  .....++.||+.|+
T Consensus       118 ~eg~F~E~~arfYlaEi~lAL~~LH~~g---IiyRDlKPENILLd~~GHi~LtDFgL~k~~~~~--~~~t~tfcGT~eYm  192 (357)
T KOG0598|consen  118 REGRFSEDRARFYLAEIVLALGYLHSKG---IIYRDLKPENILLDEQGHIKLTDFGLCKEDLKD--GDATRTFCGTPEYM  192 (357)
T ss_pred             hcCCcchhHHHHHHHHHHHHHHHHHhCC---eeeccCCHHHeeecCCCcEEEeccccchhcccC--CCccccccCCcccc
Confidence            5678899999999999999999999999   999999999999999999999999999854332  22334478999999


Q ss_pred             CcccccCCCcccccceEehhHHHHHHHhcccCCCCcCCCcccccccccCCCc-cccCccccCCcCHHHHHHHHHHHHHhc
Q 041793           83 APEYASDGKFSVKSDVFSFGILLLEIISGKKNRGFYHSDNKLNLIGHVSMPS-QLIDPCIQGSFNLVEVIRCIHIGLLCV  161 (224)
Q Consensus        83 aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~li~~cl  161 (224)
                      |||++.+.+++.++|.||||+++|+|++|.+||...........+   .... ..++     ....   ....+++..+|
T Consensus       193 APEil~~~gy~~~vDWWsLGillYeML~G~pPF~~~~~~~~~~~I---~~~k~~~~p-----~~ls---~~ardll~~LL  261 (357)
T KOG0598|consen  193 APEILLGKGYDKAVDWWSLGILLYEMLTGKPPFYAEDVKKMYDKI---LKGKLPLPP-----GYLS---EEARDLLKKLL  261 (357)
T ss_pred             ChHHHhcCCCCcccchHhHHHHHHHHhhCCCCCcCccHHHHHHHH---hcCcCCCCC-----ccCC---HHHHHHHHHHh
Confidence            999999999999999999999999999999998654433222222   1111 1111     1011   23567888999


Q ss_pred             cCCCCCCC
Q 041793          162 QQHPKDRP  169 (224)
Q Consensus       162 ~~dp~~Rp  169 (224)
                      +.||++|.
T Consensus       262 ~rdp~~RL  269 (357)
T KOG0598|consen  262 KRDPRQRL  269 (357)
T ss_pred             ccCHHHhc
Confidence            99999995


No 25 
>cd05054 PTKc_VEGFR Catalytic domain of the Protein Tyrosine Kinases, Vascular Endothelial Growth Factor Receptors. Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor (VEGFR) subfamily; catalytic (c) domain. The VEGFR subfamily consists of VEGFR1 (Flt1), VEGFR2 (Flk1), VEGFR3 (Flt4), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. In VEGFR3, the fifth Ig-like domain is replaced by a disulfide bridge. The binding of VEGFRs to their ligands, the VEGFs, leads to recepto
Probab=99.96  E-value=1.2e-29  Score=207.68  Aligned_cols=165  Identities=30%  Similarity=0.406  Sum_probs=125.3

Q ss_pred             CCCCChHHHHHHHHHHHHHHhhhhcCCCCceEecCCCCCceEECCCCCceEeeecceeecCCCCCCCcccccccccccCC
Q 041793            4 CKILDWPKRFHIICGTARGVMYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDEIEGNTNRVIGTYGYMA   83 (224)
Q Consensus         4 ~~~l~~~~~~~i~~qi~~~l~~Lh~~~~~~i~H~dl~~~nil~~~~~~~kl~df~~~~~~~~~~~~~~~~~~~~~~~y~a   83 (224)
                      ...+++.++..++.||+.||.|||+.|   |+||||||.||+++.++.++|+|||++................++..|+|
T Consensus       167 ~~~l~~~~~~~~~~qi~~aL~~lH~~~---ivHrDikp~Nill~~~~~vkL~DfG~a~~~~~~~~~~~~~~~~~~~~y~a  243 (337)
T cd05054         167 KEPLTLEDLISYSFQVARGMEFLASRK---CIHRDLAARNILLSENNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMA  243 (337)
T ss_pred             hcCCCHHHHHHHHHHHHHHHHHHHhCC---eecCCCCcceEEEeCCCcEEEeccccchhcccCcchhhccCCCCCccccC
Confidence            347899999999999999999999999   99999999999999999999999999986543221111222344667999


Q ss_pred             cccccCCCcccccceEehhHHHHHHHh-cccCCCCcCCCccc-ccccccCCCccccCccccCCcCHHHHHHHHHHHHHhc
Q 041793           84 PEYASDGKFSVKSDVFSFGILLLEIIS-GKKNRGFYHSDNKL-NLIGHVSMPSQLIDPCIQGSFNLVEVIRCIHIGLLCV  161 (224)
Q Consensus        84 PE~~~~~~~~~~~Di~slG~il~~l~~-g~~p~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl  161 (224)
                      ||.+.+..++.++|||||||+++++++ |..||......... ..+....   ..   .....    ....+.+++.+||
T Consensus       244 PE~~~~~~~~~~~Di~SlGv~l~el~t~g~~p~~~~~~~~~~~~~~~~~~---~~---~~~~~----~~~~~~~l~~~cl  313 (337)
T cd05054         244 PESIFDKVYTTQSDVWSFGVLLWEIFSLGASPYPGVQIDEEFCRRLKEGT---RM---RAPEY----ATPEIYSIMLDCW  313 (337)
T ss_pred             cHHhcCCCCCccccHHHHHHHHHHHHHcCCCCCCCCCccHHHHHHHhccC---CC---CCCcc----CCHHHHHHHHHHc
Confidence            999999999999999999999999997 99888643322111 1111000   00   00111    1234678899999


Q ss_pred             cCCCCCCCChHHHHHHhccC
Q 041793          162 QQHPKDRPSMPSVILMLGSE  181 (224)
Q Consensus       162 ~~dp~~Rps~~~v~~~L~~~  181 (224)
                      +.+|++||++.+|++.|+..
T Consensus       314 ~~~p~~RPs~~ell~~l~~~  333 (337)
T cd05054         314 HNNPEDRPTFSELVEILGDL  333 (337)
T ss_pred             cCChhhCcCHHHHHHHHHHH
Confidence            99999999999999999764


No 26 
>cd05100 PTKc_FGFR3 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 3. Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 3 (FGFR3); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR3 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to
Probab=99.96  E-value=2.7e-29  Score=205.32  Aligned_cols=168  Identities=29%  Similarity=0.388  Sum_probs=125.6

Q ss_pred             CCCChHHHHHHHHHHHHHHhhhhcCCCCceEecCCCCCceEECCCCCceEeeecceeecCCCCCCCcccccccccccCCc
Q 041793            5 KILDWPKRFHIICGTARGVMYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDEIEGNTNRVIGTYGYMAP   84 (224)
Q Consensus         5 ~~l~~~~~~~i~~qi~~~l~~Lh~~~~~~i~H~dl~~~nil~~~~~~~kl~df~~~~~~~~~~~~~~~~~~~~~~~y~aP   84 (224)
                      ..+++.+++.++.||+.||.|||+.|   ++|+||+|+||+++.++.++|+|||++................++..|+||
T Consensus       129 ~~l~~~~~~~~~~qi~~al~~LH~~g---ivH~dlkp~Nill~~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aP  205 (334)
T cd05100         129 EQLTFKDLVSCAYQVARGMEYLASQK---CIHRDLAARNVLVTEDNVMKIADFGLARDVHNIDYYKKTTNGRLPVKWMAP  205 (334)
T ss_pred             ccCCHHHHHHHHHHHHHHHHHHHHCC---eeccccccceEEEcCCCcEEECCcccceecccccccccccCCCcCceEcCH
Confidence            45889999999999999999999999   999999999999999999999999998765432211111222334579999


Q ss_pred             ccccCCCcccccceEehhHHHHHHHh-cccCCCCcCCCcccccccccCCCccccCccccCCcCHHHHHHHHHHHHHhccC
Q 041793           85 EYASDGKFSVKSDVFSFGILLLEIIS-GKKNRGFYHSDNKLNLIGHVSMPSQLIDPCIQGSFNLVEVIRCIHIGLLCVQQ  163 (224)
Q Consensus        85 E~~~~~~~~~~~Di~slG~il~~l~~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~  163 (224)
                      |.+.+..++.++|+||||+++|+|++ |..||...........+....   . .+  .....    ...+.+++.+||+.
T Consensus       206 E~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~~~~~~~~~~~~---~-~~--~~~~~----~~~l~~li~~cl~~  275 (334)
T cd05100         206 EALFDRVYTHQSDVWSFGVLLWEIFTLGGSPYPGIPVEELFKLLKEGH---R-MD--KPANC----THELYMIMRECWHA  275 (334)
T ss_pred             HHhccCCcCchhhhHHHHHHHHHHHhcCCCCCCCCCHHHHHHHHHcCC---C-CC--CCCCC----CHHHHHHHHHHccc
Confidence            99988889999999999999999998 778875433222221111111   0 00  01111    13467889999999


Q ss_pred             CCCCCCChHHHHHHhccCCCCC
Q 041793          164 HPKDRPSMPSVILMLGSEIVLP  185 (224)
Q Consensus       164 dp~~Rps~~~v~~~L~~~~~~~  185 (224)
                      +|++||++.++++.|+......
T Consensus       276 ~p~~Rps~~ell~~l~~~~~~~  297 (334)
T cd05100         276 VPSQRPTFKQLVEDLDRVLTVT  297 (334)
T ss_pred             ChhhCcCHHHHHHHHHHHhhhc
Confidence            9999999999999998765433


No 27 
>cd05111 PTK_HER3 Pseudokinase domain of the Protein Tyrosine Kinase, HER3. Protein Tyrosine Kinase (PTK) family; HER3 (ErbB3); pseudokinase domain. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER3 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr r
Probab=99.96  E-value=1.9e-29  Score=201.32  Aligned_cols=167  Identities=23%  Similarity=0.334  Sum_probs=126.9

Q ss_pred             CCCCCChHHHHHHHHHHHHHHhhhhcCCCCceEecCCCCCceEECCCCCceEeeecceeecCCCCCCCcccccccccccC
Q 041793            3 RCKILDWPKRFHIICGTARGVMYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDEIEGNTNRVIGTYGYM   82 (224)
Q Consensus         3 ~~~~l~~~~~~~i~~qi~~~l~~Lh~~~~~~i~H~dl~~~nil~~~~~~~kl~df~~~~~~~~~~~~~~~~~~~~~~~y~   82 (224)
                      ..+.+++..++.++.||+.||.|||+.+   ++|+||||+||+++.++.++++|||++................++..|+
T Consensus       102 ~~~~~~~~~~~~i~~qi~~~l~~lH~~~---iiH~dlkp~nili~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~  178 (279)
T cd05111         102 HRDSLDPQRLLNWCVQIAKGMYYLEEHR---MVHRNLAARNILLKSDSIVQIADFGVADLLYPDDKKYFYSEHKTPIKWM  178 (279)
T ss_pred             cccCCCHHHHHHHHHHHHHHHHHHHHCC---EeccccCcceEEEcCCCcEEEcCCccceeccCCCcccccCCCCCccccc
Confidence            3467899999999999999999999999   9999999999999999999999999998654322211122234566899


Q ss_pred             CcccccCCCcccccceEehhHHHHHHHh-cccCCCCcCCCcccccccccCCCccccCccccCCcCHHHHHHHHHHHHHhc
Q 041793           83 APEYASDGKFSVKSDVFSFGILLLEIIS-GKKNRGFYHSDNKLNLIGHVSMPSQLIDPCIQGSFNLVEVIRCIHIGLLCV  161 (224)
Q Consensus        83 aPE~~~~~~~~~~~Di~slG~il~~l~~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl  161 (224)
                      +||.+.+..++.++|+||||+++|++++ |..||...........+....   ....+.   ..    ...+.+++.+||
T Consensus       179 ~pE~~~~~~~~~~~Dv~slG~il~el~t~g~~p~~~~~~~~~~~~~~~~~---~~~~~~---~~----~~~~~~li~~c~  248 (279)
T cd05111         179 ALESILFGRYTHQSDVWSYGVTVWEMMSYGAEPYAGMRPHEVPDLLEKGE---RLAQPQ---IC----TIDVYMVMVKCW  248 (279)
T ss_pred             CHHHhccCCcCchhhHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHHCCC---cCCCCC---CC----CHHHHHHHHHHc
Confidence            9999988889999999999999999998 998876543322222221111   111111   11    124567888999


Q ss_pred             cCCCCCCCChHHHHHHhccCC
Q 041793          162 QQHPKDRPSMPSVILMLGSEI  182 (224)
Q Consensus       162 ~~dp~~Rps~~~v~~~L~~~~  182 (224)
                      ..||++|||+.++++.|....
T Consensus       249 ~~~p~~Rps~~el~~~l~~~~  269 (279)
T cd05111         249 MIDENVRPTFKELANEFTRMA  269 (279)
T ss_pred             CCCcccCcCHHHHHHHHHHHH
Confidence            999999999999999987753


No 28 
>PHA02882 putative serine/threonine kinase; Provisional
Probab=99.96  E-value=9.1e-30  Score=204.66  Aligned_cols=167  Identities=16%  Similarity=0.154  Sum_probs=122.6

Q ss_pred             CCChHHHHHHHHHHHHHHhhhhcCCCCceEecCCCCCceEECCCCCceEeeecceeecCCCCCC-----Ccccccccccc
Q 041793            6 ILDWPKRFHIICGTARGVMYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDEIE-----GNTNRVIGTYG   80 (224)
Q Consensus         6 ~l~~~~~~~i~~qi~~~l~~Lh~~~~~~i~H~dl~~~nil~~~~~~~kl~df~~~~~~~~~~~~-----~~~~~~~~~~~   80 (224)
                      .+++..++.++.|++.||.|||+.+   |+||||||+||+++.++.++|+|||+++.+......     .......+++.
T Consensus       122 ~~~~~~~~~i~~qi~~~l~~lH~~~---iiHrDiKp~Nill~~~~~~~l~DFGla~~~~~~~~~~~~~~~~~~~~~gt~~  198 (294)
T PHA02882        122 CKNKKLIKNIMKDMLTTLEYIHEHG---ISHGDIKPENIMVDGNNRGYIIDYGIASHFIIHGKHIEYSKEQKDLHRGTLY  198 (294)
T ss_pred             cCCHHHHHHHHHHHHHHHHHHHhCC---eecCCCCHHHEEEcCCCcEEEEEcCCceeeccCCcccccccccccccCCCcc
Confidence            3577888999999999999999999   999999999999999999999999999876422111     11122468899


Q ss_pred             cCCcccccCCCcccccceEehhHHHHHHHhcccCCCCcCCCcccccccccCCCccccCccccCCcCHHHHHHHHHHHHHh
Q 041793           81 YMAPEYASDGKFSVKSDVFSFGILLLEIISGKKNRGFYHSDNKLNLIGHVSMPSQLIDPCIQGSFNLVEVIRCIHIGLLC  160 (224)
Q Consensus        81 y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~c  160 (224)
                      |+|||.+.+..++.++|||||||++++|++|+.||....................+...........   ..+.+++..|
T Consensus       199 y~ape~~~~~~~~~~~DiwSlG~~l~el~~g~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~  275 (294)
T PHA02882        199 YAGLDAHNGACVTRRGDLESLGYCMLKWAGIKLPWKGFGHNGNLIHAAKCDFIKRLHEGKIKIKNAN---KFIYDFIECV  275 (294)
T ss_pred             ccCHHHhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCccccchHHHHHhHHHHHHHhhhhhhccCCCC---HHHHHHHHHH
Confidence            9999999998999999999999999999999999976532211100000000011111110111111   3467888999


Q ss_pred             ccCCCCCCCChHHHHHHh
Q 041793          161 VQQHPKDRPSMPSVILML  178 (224)
Q Consensus       161 l~~dp~~Rps~~~v~~~L  178 (224)
                      |..+|++||+++++++.|
T Consensus       276 ~~~~~~~rp~~~~l~~~~  293 (294)
T PHA02882        276 TKLSYEEKPDYDALIKIF  293 (294)
T ss_pred             HhCCCCCCCCHHHHHHhh
Confidence            999999999999999876


No 29 
>cd05094 PTKc_TrkC Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase C. Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase C (TrkC); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkC is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkC to its ligand, neurotrophin 3 (NT3), results in receptor oligomerization and activation of the catalytic domain. TrkC is broadly expressed in the nervous system and in some n
Probab=99.96  E-value=1.4e-29  Score=203.07  Aligned_cols=165  Identities=26%  Similarity=0.391  Sum_probs=125.9

Q ss_pred             CCCCChHHHHHHHHHHHHHHhhhhcCCCCceEecCCCCCceEECCCCCceEeeecceeecCCCCCCCcccccccccccCC
Q 041793            4 CKILDWPKRFHIICGTARGVMYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDEIEGNTNRVIGTYGYMA   83 (224)
Q Consensus         4 ~~~l~~~~~~~i~~qi~~~l~~Lh~~~~~~i~H~dl~~~nil~~~~~~~kl~df~~~~~~~~~~~~~~~~~~~~~~~y~a   83 (224)
                      .+.+++.+++.++.||+.||+|||++|   ++|+||+|.||+++.++.++|+|||++................++..|+|
T Consensus       117 ~~~~~~~~~~~i~~~i~~al~~lH~~~---i~H~dlkp~Nil~~~~~~~~l~dfg~a~~~~~~~~~~~~~~~~~~~~y~a  193 (291)
T cd05094         117 KGELGLSQMLHIASQIASGMVYLASQH---FVHRDLATRNCLVGANLLVKIGDFGMSRDVYSTDYYRVGGHTMLPIRWMP  193 (291)
T ss_pred             cCCCCHHHHHHHHHHHHHHHHHHHhCC---eeecccCcceEEEccCCcEEECCCCcccccCCCceeecCCCCCcceeecC
Confidence            345899999999999999999999999   99999999999999999999999999876533221111222345678999


Q ss_pred             cccccCCCcccccceEehhHHHHHHHh-cccCCCCcCCCcccccccccCCCccccCccccCCcCHHHHHHHHHHHHHhcc
Q 041793           84 PEYASDGKFSVKSDVFSFGILLLEIIS-GKKNRGFYHSDNKLNLIGHVSMPSQLIDPCIQGSFNLVEVIRCIHIGLLCVQ  162 (224)
Q Consensus        84 PE~~~~~~~~~~~Di~slG~il~~l~~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~  162 (224)
                      ||.+.+..++.++|+||||+++|+|++ |..||...........+.....    ..  ....    ....+.+++.+||+
T Consensus       194 PE~~~~~~~~~~~Di~slG~il~el~t~g~~p~~~~~~~~~~~~~~~~~~----~~--~~~~----~~~~~~~li~~~l~  263 (291)
T cd05094         194 PESIMYRKFTTESDVWSFGVILWEIFTYGKQPWFQLSNTEVIECITQGRV----LE--RPRV----CPKEVYDIMLGCWQ  263 (291)
T ss_pred             hHHhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHhCCCC----CC--CCcc----CCHHHHHHHHHHcc
Confidence            999988889999999999999999998 9998754333222221111111    00  0011    12346789999999


Q ss_pred             CCCCCCCChHHHHHHhccC
Q 041793          163 QHPKDRPSMPSVILMLGSE  181 (224)
Q Consensus       163 ~dp~~Rps~~~v~~~L~~~  181 (224)
                      .||++||++.+|++.|+..
T Consensus       264 ~~P~~Rpt~~~v~~~l~~~  282 (291)
T cd05094         264 REPQQRLNIKEIYKILHAL  282 (291)
T ss_pred             cChhhCcCHHHHHHHHHHH
Confidence            9999999999999999876


No 30 
>cd05108 PTKc_EGFR Catalytic domain of the Protein Tyrosine Kinase, Epidermal Growth Factor Receptor. Protein Tyrosine Kinase (PTK) family; Epidermal Growth Factor Receptor (EGFR); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EGFR (HER1, ErbB1) is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphor
Probab=99.96  E-value=1.5e-29  Score=205.27  Aligned_cols=166  Identities=25%  Similarity=0.369  Sum_probs=125.4

Q ss_pred             CCCCChHHHHHHHHHHHHHHhhhhcCCCCceEecCCCCCceEECCCCCceEeeecceeecCCCCCCCcccccccccccCC
Q 041793            4 CKILDWPKRFHIICGTARGVMYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDEIEGNTNRVIGTYGYMA   83 (224)
Q Consensus         4 ~~~l~~~~~~~i~~qi~~~l~~Lh~~~~~~i~H~dl~~~nil~~~~~~~kl~df~~~~~~~~~~~~~~~~~~~~~~~y~a   83 (224)
                      ...+++..++.++.||+.||+|||+.+   |+||||||+||+++.++.++|+|||++.................+..|++
T Consensus       103 ~~~~~~~~~~~~~~qi~~~L~~LH~~~---iiH~dlkp~Nill~~~~~~kl~DfG~a~~~~~~~~~~~~~~~~~~~~y~a  179 (316)
T cd05108         103 KDNIGSQYLLNWCVQIAKGMNYLEERR---LVHRDLAARNVLVKTPQHVKITDFGLAKLLGADEKEYHAEGGKVPIKWMA  179 (316)
T ss_pred             cccCCHHHHHHHHHHHHHHHHHHHhcC---eeccccchhheEecCCCcEEEccccccccccCCCcceeccCCccceeecC
Confidence            346889999999999999999999999   99999999999999999999999999987643322111111223567999


Q ss_pred             cccccCCCcccccceEehhHHHHHHHh-cccCCCCcCCCcccccccccCCCccccCccccCCcCHHHHHHHHHHHHHhcc
Q 041793           84 PEYASDGKFSVKSDVFSFGILLLEIIS-GKKNRGFYHSDNKLNLIGHVSMPSQLIDPCIQGSFNLVEVIRCIHIGLLCVQ  162 (224)
Q Consensus        84 PE~~~~~~~~~~~Di~slG~il~~l~~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~  162 (224)
                      ||.+.+..++.++|+||||+++|++++ |..||...............   .....+   ...+    ..+.+++.+||+
T Consensus       180 pE~~~~~~~~~~~Di~slGv~l~el~t~g~~p~~~~~~~~~~~~~~~~---~~~~~~---~~~~----~~~~~li~~cl~  249 (316)
T cd05108         180 LESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKG---ERLPQP---PICT----IDVYMIMVKCWM  249 (316)
T ss_pred             hHHhccCCCCchhhhHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHhCC---CCCCCC---CCCC----HHHHHHHHHHcc
Confidence            999988889999999999999999997 89997653322222211111   111111   1111    246788999999


Q ss_pred             CCCCCCCChHHHHHHhccCC
Q 041793          163 QHPKDRPSMPSVILMLGSEI  182 (224)
Q Consensus       163 ~dp~~Rps~~~v~~~L~~~~  182 (224)
                      .||++||++.+++..|....
T Consensus       250 ~~p~~Rps~~~l~~~l~~~~  269 (316)
T cd05108         250 IDADSRPKFRELIIEFSKMA  269 (316)
T ss_pred             CChhhCcCHHHHHHHHHHHH
Confidence            99999999999999987663


No 31 
>PHA02988 hypothetical protein; Provisional
Probab=99.96  E-value=1.3e-29  Score=202.68  Aligned_cols=161  Identities=17%  Similarity=0.291  Sum_probs=123.6

Q ss_pred             CCCCChHHHHHHHHHHHHHHhhhhcC-CCCceEecCCCCCceEECCCCCceEeeecceeecCCCCCCCcccccccccccC
Q 041793            4 CKILDWPKRFHIICGTARGVMYLHQD-SRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDEIEGNTNRVIGTYGYM   82 (224)
Q Consensus         4 ~~~l~~~~~~~i~~qi~~~l~~Lh~~-~~~~i~H~dl~~~nil~~~~~~~kl~df~~~~~~~~~~~~~~~~~~~~~~~y~   82 (224)
                      .+.+++.+.+.++.|++.||.|||+. +   ++||||+|+||+++.++.+|++|||++......     .....++..|+
T Consensus       116 ~~~~~~~~~~~i~~~i~~~l~~lH~~~~---~~Hrdlkp~nill~~~~~~kl~dfg~~~~~~~~-----~~~~~~~~~y~  187 (283)
T PHA02988        116 EKDLSFKTKLDMAIDCCKGLYNLYKYTN---KPYKNLTSVSFLVTENYKLKIICHGLEKILSSP-----PFKNVNFMVYF  187 (283)
T ss_pred             CCCCChhHHHHHHHHHHHHHHHHHhcCC---CCCCcCChhhEEECCCCcEEEcccchHhhhccc-----cccccCccccc
Confidence            45789999999999999999999985 7   889999999999999999999999998754322     12245678899


Q ss_pred             CcccccC--CCcccccceEehhHHHHHHHhcccCCCCcCCCcccccccccCCCccccCccccCCcCHHHHHHHHHHHHHh
Q 041793           83 APEYASD--GKFSVKSDVFSFGILLLEIISGKKNRGFYHSDNKLNLIGHVSMPSQLIDPCIQGSFNLVEVIRCIHIGLLC  160 (224)
Q Consensus        83 aPE~~~~--~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~c  160 (224)
                      |||.+.+  ..++.++||||||+++|+|++|+.||...........+........     .+...    ...+.+|+.+|
T Consensus       188 aPE~~~~~~~~~~~k~Di~SlGvil~el~~g~~Pf~~~~~~~~~~~i~~~~~~~~-----~~~~~----~~~l~~li~~c  258 (283)
T PHA02988        188 SYKMLNDIFSEYTIKDDIYSLGVVLWEIFTGKIPFENLTTKEIYDLIINKNNSLK-----LPLDC----PLEIKCIVEAC  258 (283)
T ss_pred             CHHHhhhccccccchhhhhHHHHHHHHHHHCCCCCCCCCHHHHHHHHHhcCCCCC-----CCCcC----cHHHHHHHHHH
Confidence            9999876  6789999999999999999999999875432222111111111111     11111    12467889999


Q ss_pred             ccCCCCCCCChHHHHHHhccC
Q 041793          161 VQQHPKDRPSMPSVILMLGSE  181 (224)
Q Consensus       161 l~~dp~~Rps~~~v~~~L~~~  181 (224)
                      |+.||++|||+.+|++.|+..
T Consensus       259 l~~dp~~Rps~~ell~~l~~~  279 (283)
T PHA02988        259 TSHDSIKRPNIKEILYNLSLY  279 (283)
T ss_pred             hcCCcccCcCHHHHHHHHHHH
Confidence            999999999999999998754


No 32 
>cd07862 STKc_CDK6 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 6. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 6 (CDK6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK6 is regulated by D-type cyclins and INK4 inhibitors. It is active towards the retinoblastoma (pRb) protein, implicating it to function in regulating the early G1 phase of the cell cycle. It is expressed ubiquitously and is localized in the cytopla
Probab=99.96  E-value=1.5e-29  Score=202.67  Aligned_cols=165  Identities=24%  Similarity=0.296  Sum_probs=121.7

Q ss_pred             CCCCChHHHHHHHHHHHHHHhhhhcCCCCceEecCCCCCceEECCCCCceEeeecceeecCCCCCCCcccccccccccCC
Q 041793            4 CKILDWPKRFHIICGTARGVMYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDEIEGNTNRVIGTYGYMA   83 (224)
Q Consensus         4 ~~~l~~~~~~~i~~qi~~~l~~Lh~~~~~~i~H~dl~~~nil~~~~~~~kl~df~~~~~~~~~~~~~~~~~~~~~~~y~a   83 (224)
                      ...+++.+++.++.||+.||.|||+.|   |+||||||+||+++.++.++|+|||++......   .......++..|+|
T Consensus       104 ~~~~~~~~~~~i~~qi~~aL~~lH~~~---iiH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~---~~~~~~~~~~~y~a  177 (290)
T cd07862         104 EPGVPTETIKDMMFQLLRGLDFLHSHR---VVHRDLKPQNILVTSSGQIKLADFGLARIYSFQ---MALTSVVVTLWYRA  177 (290)
T ss_pred             CCCCCHHHHHHHHHHHHHHHHHHHHCC---eeeCCCCHHHEEEcCCCCEEEccccceEeccCC---cccccccccccccC
Confidence            346899999999999999999999999   999999999999999999999999999865432   11223457889999


Q ss_pred             cccccCCCcccccceEehhHHHHHHHhcccCCCCcCCCcccccc-cccC------------CCccccCccccCCcCHH--
Q 041793           84 PEYASDGKFSVKSDVFSFGILLLEIISGKKNRGFYHSDNKLNLI-GHVS------------MPSQLIDPCIQGSFNLV--  148 (224)
Q Consensus        84 PE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~-~~~~------------~~~~~~~~~~~~~~~~~--  148 (224)
                      ||.+.+..++.++|+|||||++|+|++|+.||...........+ ....            .........  ......  
T Consensus       178 PE~~~~~~~~~~~DiwslG~il~el~~g~~~f~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~  255 (290)
T cd07862         178 PEVLLQSSYATPVDLWSVGCIFAEMFRRKPLFRGSSDVDQLGKILDVIGLPGEEDWPRDVALPRQAFHSK--SAQPIEKF  255 (290)
T ss_pred             hHHHhCCCCCCccchHHHHHHHHHHHcCCCCcCCCCHHHHHHHHHHHhCCCChhhchhhhcccchhccCC--CCCCHHHH
Confidence            99998888999999999999999999999998654322111110 0000            000000000  000011  


Q ss_pred             ---HHHHHHHHHHHhccCCCCCCCChHHHHH
Q 041793          149 ---EVIRCIHIGLLCVQQHPKDRPSMPSVIL  176 (224)
Q Consensus       149 ---~~~~~~~li~~cl~~dp~~Rps~~~v~~  176 (224)
                         ....+.+++.+||+.||++|||+.++++
T Consensus       256 ~~~~~~~~~~li~~~l~~~P~~R~s~~~~l~  286 (290)
T cd07862         256 VTDIDELGKDLLLKCLTFNPAKRISAYSALS  286 (290)
T ss_pred             ccCCCHHHHHHHHHHhccCchhcCCHHHHhc
Confidence               1124568999999999999999999974


No 33 
>cd05075 PTKc_Axl Catalytic domain of the Protein Tyrosine Kinase, Axl. Protein Tyrosine Kinase (PTK) family; Axl; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Axl is a member of the Axl subfamily, which is composed of receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Axl is widely expressed in a variety of organs and cells including epithelial, mesenchymal, hematopoietic, as well as non-transfor
Probab=99.96  E-value=2e-29  Score=200.05  Aligned_cols=165  Identities=25%  Similarity=0.355  Sum_probs=124.2

Q ss_pred             CCCCChHHHHHHHHHHHHHHhhhhcCCCCceEecCCCCCceEECCCCCceEeeecceeecCCCCCCCcccccccccccCC
Q 041793            4 CKILDWPKRFHIICGTARGVMYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDEIEGNTNRVIGTYGYMA   83 (224)
Q Consensus         4 ~~~l~~~~~~~i~~qi~~~l~~Lh~~~~~~i~H~dl~~~nil~~~~~~~kl~df~~~~~~~~~~~~~~~~~~~~~~~y~a   83 (224)
                      ...+++.+++.++.||+.||.|||+.+   |+|+||||+||+++.++.++++|||++................++..|++
T Consensus       106 ~~~~~~~~~~~~~~~i~~~l~~lH~~~---i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~~~  182 (272)
T cd05075         106 PQYLPTQMLVKFMTDIASGMEYLSSKS---FIHRDLAARNCMLNENMNVCVADFGLSKKIYNGDYYRQGRIAKMPVKWIA  182 (272)
T ss_pred             cccCCHHHHHHHHHHHHHHHHHHHHCC---eeccccchhheEEcCCCCEEECCCCcccccCcccceecCCcccCCcccCC
Confidence            345899999999999999999999999   99999999999999999999999999987643221111122234667999


Q ss_pred             cccccCCCcccccceEehhHHHHHHHh-cccCCCCcCCCcccccccccCCCccccCccccCCcCHHHHHHHHHHHHHhcc
Q 041793           84 PEYASDGKFSVKSDVFSFGILLLEIIS-GKKNRGFYHSDNKLNLIGHVSMPSQLIDPCIQGSFNLVEVIRCIHIGLLCVQ  162 (224)
Q Consensus        84 PE~~~~~~~~~~~Di~slG~il~~l~~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~  162 (224)
                      ||.+.+..++.++|+||||+++|++++ |..||...........+....   ....   ....    ...+.+++.+||+
T Consensus       183 pe~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~~~~~~~~~~~~---~~~~---~~~~----~~~~~~li~~~l~  252 (272)
T cd05075         183 IESLADRVYTTKSDVWSFGVTMWEIATRGQTPYPGVENSEIYDYLRQGN---RLKQ---PPDC----LDGLYSLMSSCWL  252 (272)
T ss_pred             HHHccCCCcChHHHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHHcCC---CCCC---CCCC----CHHHHHHHHHHcC
Confidence            999988889999999999999999998 788875433222111111111   1000   0111    1246789999999


Q ss_pred             CCCCCCCChHHHHHHhccC
Q 041793          163 QHPKDRPSMPSVILMLGSE  181 (224)
Q Consensus       163 ~dp~~Rps~~~v~~~L~~~  181 (224)
                      .||++|||+.+|++.|+..
T Consensus       253 ~~p~~Rps~~~l~~~l~~~  271 (272)
T cd05075         253 LNPKDRPSFETLRCELEKA  271 (272)
T ss_pred             CCcccCcCHHHHHHHHHhh
Confidence            9999999999999998753


No 34 
>cd05053 PTKc_FGFR Catalytic domain of the Protein Tyrosine Kinases, Fibroblast Growth Factor Receptors. Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor (FGFR) subfamily; catalytic (c) domain. The FGFR subfamily consists of FGFR1, FGFR2, FGFR3, FGFR4, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K).PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, and to heparin/heparan sulfate (HS) results in the formation of a ternary complex, which leads to receptor dimerization and activation, 
Probab=99.96  E-value=3e-29  Score=201.17  Aligned_cols=166  Identities=28%  Similarity=0.349  Sum_probs=125.4

Q ss_pred             CCCCCChHHHHHHHHHHHHHHhhhhcCCCCceEecCCCCCceEECCCCCceEeeecceeecCCCCCCCcccccccccccC
Q 041793            3 RCKILDWPKRFHIICGTARGVMYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDEIEGNTNRVIGTYGYM   82 (224)
Q Consensus         3 ~~~~l~~~~~~~i~~qi~~~l~~Lh~~~~~~i~H~dl~~~nil~~~~~~~kl~df~~~~~~~~~~~~~~~~~~~~~~~y~   82 (224)
                      ..+.+++..++.++.||+.||+|||+.+   |+|+||+|.||+++.++.++|+|||++................++..|+
T Consensus       125 ~~~~l~~~~~~~i~~qi~~al~~LH~~~---ivH~dlkp~Nil~~~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~~~~y~  201 (293)
T cd05053         125 PEETLTQKDLVSFAYQVARGMEFLASKK---CIHRDLAARNVLVTEDHVMKIADFGLARDIHHIDYYRKTTNGRLPVKWM  201 (293)
T ss_pred             cccccCHHHHHHHHHHHHHHHHHHHHCC---ccccccceeeEEEcCCCeEEeCccccccccccccceeccCCCCCCcccc
Confidence            3567899999999999999999999999   9999999999999999999999999998764332211112123456799


Q ss_pred             CcccccCCCcccccceEehhHHHHHHHh-cccCCCCcCCCcccccccccCCCccccCccccCCcCHHHHHHHHHHHHHhc
Q 041793           83 APEYASDGKFSVKSDVFSFGILLLEIIS-GKKNRGFYHSDNKLNLIGHVSMPSQLIDPCIQGSFNLVEVIRCIHIGLLCV  161 (224)
Q Consensus        83 aPE~~~~~~~~~~~Di~slG~il~~l~~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl  161 (224)
                      |||.+.+..++.++|+|||||++|++++ |..||.................    ..  ..    ......+.+|+.+||
T Consensus       202 aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~~~~~~~~~~~~~----~~--~~----~~~~~~~~~li~~~l  271 (293)
T cd05053         202 APEALFDRVYTHQSDVWSFGVLLWEIFTLGGSPYPGIPVEELFKLLKEGYR----ME--KP----QNCTQELYHLMRDCW  271 (293)
T ss_pred             CHHHhccCCcCcccceeehhhHHHHHhcCCCCCCCCCCHHHHHHHHHcCCc----CC--CC----CCCCHHHHHHHHHHc
Confidence            9999888889999999999999999997 8888754332222211111110    00  00    111235678999999


Q ss_pred             cCCCCCCCChHHHHHHhccC
Q 041793          162 QQHPKDRPSMPSVILMLGSE  181 (224)
Q Consensus       162 ~~dp~~Rps~~~v~~~L~~~  181 (224)
                      ..||++|||+.++++.|+..
T Consensus       272 ~~~p~~Rps~~eil~~l~~~  291 (293)
T cd05053         272 HEVPSQRPTFKQLVEDLDRM  291 (293)
T ss_pred             ccCcccCcCHHHHHHHHHHh
Confidence            99999999999999998764


No 35 
>cd05104 PTKc_Kit Catalytic domain of the Protein Tyrosine Kinase, Kit. Protein Tyrosine Kinase (PTK) family; Kit (or c-Kit); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Kit is a member of the Platelet Derived Growth Factor Receptor (PDGFR) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of Kit to its ligand, the stem-cell factor (SCF), leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. Kit is important in the development of melanocytes, germ cells, mast cells, hematopoietic stem ce
Probab=99.96  E-value=2.7e-29  Score=208.40  Aligned_cols=166  Identities=28%  Similarity=0.383  Sum_probs=123.5

Q ss_pred             CCCCChHHHHHHHHHHHHHHhhhhcCCCCceEecCCCCCceEECCCCCceEeeecceeecCCCCCCCcccccccccccCC
Q 041793            4 CKILDWPKRFHIICGTARGVMYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDEIEGNTNRVIGTYGYMA   83 (224)
Q Consensus         4 ~~~l~~~~~~~i~~qi~~~l~~Lh~~~~~~i~H~dl~~~nil~~~~~~~kl~df~~~~~~~~~~~~~~~~~~~~~~~y~a   83 (224)
                      ...+++..++.++.||+.||.|||+.+   |+||||||.||+++.++.++|+|||++................++..|+|
T Consensus       208 ~~~l~~~~~~~~~~qi~~~l~~lH~~~---ivH~Dlkp~Nill~~~~~~kl~DfG~a~~~~~~~~~~~~~~~~~~~~y~a  284 (375)
T cd05104         208 ELALDTEDLLSFSYQVAKGMSFLASKN---CIHRDLAARNILLTHGRITKICDFGLARDIRNDSNYVVKGNARLPVKWMA  284 (375)
T ss_pred             CCCCCHHHHHHHHHHHHHHHHHHHHCC---eeccCCchhhEEEECCCcEEEecCccceeccCcccccccCCCCCCcceeC
Confidence            357899999999999999999999999   99999999999999999999999999986543221111112234567999


Q ss_pred             cccccCCCcccccceEehhHHHHHHHh-cccCCCCcCCCcccccccccCCCccccCccccCCcCHHHHHHHHHHHHHhcc
Q 041793           84 PEYASDGKFSVKSDVFSFGILLLEIIS-GKKNRGFYHSDNKLNLIGHVSMPSQLIDPCIQGSFNLVEVIRCIHIGLLCVQ  162 (224)
Q Consensus        84 PE~~~~~~~~~~~Di~slG~il~~l~~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~  162 (224)
                      ||.+.+..++.++|+||||+++|+|++ |..||........  .............   +. ..   ...+.+|+.+||+
T Consensus       285 PE~~~~~~~~~~sDi~slG~~l~ellt~g~~p~~~~~~~~~--~~~~~~~~~~~~~---~~-~~---~~~l~~li~~cl~  355 (375)
T cd05104         285 PESIFNCVYTFESDVWSYGILLWEIFSLGSSPYPGMPVDSK--FYKMIKEGYRMLS---PE-CA---PSEMYDIMKSCWD  355 (375)
T ss_pred             hhHhcCCCCCCCCCHHHHHHHHHHHHhcCCCCCCCCCchHH--HHHHHHhCccCCC---CC-CC---CHHHHHHHHHHcc
Confidence            999998899999999999999999997 8888754332211  1111100000000   00 11   1246789999999


Q ss_pred             CCCCCCCChHHHHHHhccC
Q 041793          163 QHPKDRPSMPSVILMLGSE  181 (224)
Q Consensus       163 ~dp~~Rps~~~v~~~L~~~  181 (224)
                      .||++|||+.+|++.|+..
T Consensus       356 ~dP~~RPs~~eil~~l~~~  374 (375)
T cd05104         356 ADPLKRPTFKQIVQLIEQQ  374 (375)
T ss_pred             CChhHCcCHHHHHHHHHhh
Confidence            9999999999999999753


No 36 
>PHA03207 serine/threonine kinase US3; Provisional
Probab=99.96  E-value=1.3e-29  Score=211.56  Aligned_cols=172  Identities=20%  Similarity=0.262  Sum_probs=124.9

Q ss_pred             CCCCCChHHHHHHHHHHHHHHhhhhcCCCCceEecCCCCCceEECCCCCceEeeecceeecCCCCCCCcccccccccccC
Q 041793            3 RCKILDWPKRFHIICGTARGVMYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDEIEGNTNRVIGTYGYM   82 (224)
Q Consensus         3 ~~~~l~~~~~~~i~~qi~~~l~~Lh~~~~~~i~H~dl~~~nil~~~~~~~kl~df~~~~~~~~~~~~~~~~~~~~~~~y~   82 (224)
                      ..+.|++.+++.++.||+.||.|||+.|   |+||||||+||+++.++.++|+|||++................++..|+
T Consensus       178 ~~~~l~~~~~~~i~~ql~~aL~~LH~~g---ivHrDlkp~Nill~~~~~~~l~DfG~a~~~~~~~~~~~~~~~~gt~~y~  254 (392)
T PHA03207        178 RSGPLPLEQAITIQRRLLEALAYLHGRG---IIHRDVKTENIFLDEPENAVLGDFGAACKLDAHPDTPQCYGWSGTLETN  254 (392)
T ss_pred             hcCCCCHHHHHHHHHHHHHHHHHHHHCC---ccccCCCHHHEEEcCCCCEEEccCccccccCcccccccccccccccCcc
Confidence            3567899999999999999999999999   9999999999999999999999999997654432222223456889999


Q ss_pred             CcccccCCCcccccceEehhHHHHHHHhcccCCCCcCCCccccccccc----C-----CCccc----------cCccccC
Q 041793           83 APEYASDGKFSVKSDVFSFGILLLEIISGKKNRGFYHSDNKLNLIGHV----S-----MPSQL----------IDPCIQG  143 (224)
Q Consensus        83 aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~----~-----~~~~~----------~~~~~~~  143 (224)
                      |||++.+..++.++|||||||++|+|++|+.||...........+..+    .     .+...          .......
T Consensus       255 aPE~~~~~~~~~~~DvwslGvil~el~~g~~pf~~~~~~~~~~~l~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  334 (392)
T PHA03207        255 SPELLALDPYCAKTDIWSAGLVLFEMSVKNVTLFGKQVKSSSSQLRSIIRCMQVHPLEFPQNGSTNLCKHFKQYAIVLRP  334 (392)
T ss_pred             CHhHhcCCCCCchhhHHHHHHHHHHHHHCCCCCCCCCCCCcHHHHHHHHHHhccCccccCCccchhHHHHHHhhcccccC
Confidence            999999888999999999999999999999998654322111000000    0     00000          0000000


Q ss_pred             CcCH-------HHHHHHHHHHHHhccCCCCCCCChHHHHHH
Q 041793          144 SFNL-------VEVIRCIHIGLLCVQQHPKDRPSMPSVILM  177 (224)
Q Consensus       144 ~~~~-------~~~~~~~~li~~cl~~dp~~Rps~~~v~~~  177 (224)
                      ....       .....+.++|.+||+.||++|||+.+++..
T Consensus       335 ~~~~~~~~~~~~~~~~~~~li~~ml~~dp~~Rpsa~e~l~~  375 (392)
T PHA03207        335 PYTIPPVIRKYGMHMDVEYLIAKMLTFDQEFRPSAQDILSL  375 (392)
T ss_pred             CccccchhhccCcchhHHHHHHHHhccChhhCCCHHHHhhC
Confidence            0000       011346678899999999999999999775


No 37 
>KOG0667 consensus Dual-specificity tyrosine-phosphorylation regulated kinase [General function prediction only]
Probab=99.96  E-value=2.3e-29  Score=210.77  Aligned_cols=168  Identities=22%  Similarity=0.285  Sum_probs=127.1

Q ss_pred             CCCCCCChHHHHHHHHHHHHHHhhhhcCCCCceEecCCCCCceEECCC--CCceEeeecceeecCCCCCCCccccccccc
Q 041793            2 ERCKILDWPKRFHIICGTARGVMYLHQDSRLRIIHRDLKASNVLLDQD--MNPKISDFGLARAFGGDEIEGNTNRVIGTY   79 (224)
Q Consensus         2 ~~~~~l~~~~~~~i~~qi~~~l~~Lh~~~~~~i~H~dl~~~nil~~~~--~~~kl~df~~~~~~~~~~~~~~~~~~~~~~   79 (224)
                      ++-+.|+...+..++.||+.||.+||+.+   |+|+||||+|||+...  ..+|++|||.+++....     .+++..+.
T Consensus       281 n~f~Glsl~~ir~~~~Qil~~L~~L~~l~---IIHcDLKPENILL~~~~r~~vKVIDFGSSc~~~q~-----vytYiQSR  352 (586)
T KOG0667|consen  281 NKFRGLSLPLVRKFAQQILTALLFLHELG---IIHCDLKPENILLKDPKRSRIKVIDFGSSCFESQR-----VYTYIQSR  352 (586)
T ss_pred             cCCCCCCHHHHHHHHHHHHHHHHHHHhCC---eeeccCChhheeeccCCcCceeEEecccccccCCc-----ceeeeecc
Confidence            45677999999999999999999999999   9999999999999744  36899999999975432     23567788


Q ss_pred             ccCCcccccCCCcccccceEehhHHHHHHHhcccCCCCcCCCcccccccccC-------------------C----Cc--
Q 041793           80 GYMAPEYASDGKFSVKSDVFSFGILLLEIISGKKNRGFYHSDNKLNLIGHVS-------------------M----PS--  134 (224)
Q Consensus        80 ~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~-------------------~----~~--  134 (224)
                      .|+|||++.|.+|+.+.||||||||+.||++|.+.|.+....+....+-.+.                   .    +.  
T Consensus       353 fYRAPEVILGlpY~~~IDmWSLGCIlAEL~tG~PLfpG~ne~DQl~~I~e~lG~Pp~~mL~~~~~~~kff~~~~~~~~~~  432 (586)
T KOG0667|consen  353 FYRAPEVILGLPYDTAIDMWSLGCILAELFTGEPLFPGDNEYDQLARIIEVLGLPPPKMLDTAKKAHKFFTSLKGFPRLC  432 (586)
T ss_pred             ccccchhhccCCCCCccceeehhhhHHhHhcCccccCCCCHHHHHHHHHHHhCCCCHHHHHhccccceehhccCCceeee
Confidence            9999999999999999999999999999999988776544333322211100                   0    00  


Q ss_pred             ---c-----------------ccC---c----cccCCcCHHHHHHHHHHHHHhccCCCCCCCChHHHHHH
Q 041793          135 ---Q-----------------LID---P----CIQGSFNLVEVIRCIHIGLLCVQQHPKDRPSMPSVILM  177 (224)
Q Consensus       135 ---~-----------------~~~---~----~~~~~~~~~~~~~~~~li~~cl~~dp~~Rps~~~v~~~  177 (224)
                         .                 ..+   +    .+.......+...+++++++||.+||.+|+|..++++.
T Consensus       433 ~~~~~~~~~k~~~~~~~~~~~~~~~~~P~~~~~l~~~~~~~~~~~F~dflk~~L~~dP~~R~tp~qal~H  502 (586)
T KOG0667|consen  433 VETSAPRGTKSPEVRKYYRKARLERRGPPGSRSLESGLPKADDKLFIDFLKRCLEWDPAERITPAQALNH  502 (586)
T ss_pred             eeecccccccchhhhhhhhhhcccccCCCCCcccchhcccccHHHHHHHHHHHhccCchhcCCHHHHhcC
Confidence               0                 000   0    01111122345667999999999999999999999874


No 38 
>KOG0659 consensus Cdk activating kinase (CAK)/RNA polymerase II transcription initiation/nucleotide excision repair factor TFIIH/TFIIK, kinase subunit CDK7 [Cell cycle control, cell division, chromosome partitioning; Transcription; Replication, recombination and repair]
Probab=99.96  E-value=1.5e-29  Score=191.66  Aligned_cols=171  Identities=25%  Similarity=0.324  Sum_probs=127.6

Q ss_pred             CCCCCCChHHHHHHHHHHHHHHhhhhcCCCCceEecCCCCCceEECCCCCceEeeecceeecCCCCCCCccccccccccc
Q 041793            2 ERCKILDWPKRFHIICGTARGVMYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDEIEGNTNRVIGTYGY   81 (224)
Q Consensus         2 ~~~~~l~~~~~~~i~~qi~~~l~~Lh~~~~~~i~H~dl~~~nil~~~~~~~kl~df~~~~~~~~~~~~~~~~~~~~~~~y   81 (224)
                      ++...|+-.++..++.+++.||+|||.+.   |+|||+||.|++++.+|.+|++|||+++.+.........  .+-|.+|
T Consensus        93 d~~i~l~pa~iK~y~~m~LkGl~y~H~~~---IlHRDlKPnNLLis~~g~lKiADFGLAr~f~~p~~~~~~--~V~TRWY  167 (318)
T KOG0659|consen   93 DKNIILSPADIKSYMLMTLKGLAYCHSKW---ILHRDLKPNNLLISSDGQLKIADFGLARFFGSPNRIQTH--QVVTRWY  167 (318)
T ss_pred             ccccccCHHHHHHHHHHHHHHHHHHHhhh---hhcccCCccceEEcCCCcEEeecccchhccCCCCccccc--ceeeeec
Confidence            56778899999999999999999999999   999999999999999999999999999988654433222  2568899


Q ss_pred             CCcccccCC-CcccccceEehhHHHHHHHhcccCCCCcCCCcccccccc-cC------------CC-----ccccCcccc
Q 041793           82 MAPEYASDG-KFSVKSDVFSFGILLLEIISGKKNRGFYHSDNKLNLIGH-VS------------MP-----SQLIDPCIQ  142 (224)
Q Consensus        82 ~aPE~~~~~-~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~-~~------------~~-----~~~~~~~~~  142 (224)
                      +|||++.|. .|+...||||.|||+.||+-|.+-|.+..+-+....+-. ..            ++     ...+.+...
T Consensus       168 RAPELLfGsr~Yg~~VDmWavGCI~AELllr~P~fpG~sDidQL~~If~~LGTP~~~~WP~~~~lpdY~~~~~~P~~~~~  247 (318)
T KOG0659|consen  168 RAPELLFGSRQYGTGVDMWAVGCIFAELLLRVPFFPGDSDIDQLSKIFRALGTPTPDQWPEMTSLPDYVKIQQFPKPPLN  247 (318)
T ss_pred             cChHHhccchhcCCcchhhhHHHHHHHHHccCCCCCCCchHHHHHHHHHHcCCCCcccCccccccccHHHHhcCCCCccc
Confidence            999999875 578999999999999999999877655443333222211 01            00     011111111


Q ss_pred             CCcCHHHHHHHHHHHHHhccCCCCCCCChHHHHHHh
Q 041793          143 GSFNLVEVIRCIHIGLLCVQQHPKDRPSMPSVILML  178 (224)
Q Consensus       143 ~~~~~~~~~~~~~li~~cl~~dp~~Rps~~~v~~~L  178 (224)
                      ..+.. .....++|+..||.+||.+|+++.|+++.=
T Consensus       248 ~lf~a-as~d~ldLl~~m~~ynP~~Rita~qaL~~~  282 (318)
T KOG0659|consen  248 NLFPA-ASSDALDLLSKMLTYNPKKRITASQALKHP  282 (318)
T ss_pred             ccccc-ccHHHHHHHHhhhccCchhcccHHHHhcch
Confidence            11111 123458999999999999999999997653


No 39 
>KOG1989 consensus ARK protein kinase family [Signal transduction mechanisms]
Probab=99.96  E-value=3.6e-29  Score=215.38  Aligned_cols=162  Identities=25%  Similarity=0.179  Sum_probs=125.6

Q ss_pred             CCChHHHHHHHHHHHHHHhhhhcCCCCceEecCCCCCceEECCCCCceEeeecceeecCCCCCCCcc-------cccccc
Q 041793            6 ILDWPKRFHIICGTARGVMYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDEIEGNT-------NRVIGT   78 (224)
Q Consensus         6 ~l~~~~~~~i~~qi~~~l~~Lh~~~~~~i~H~dl~~~nil~~~~~~~kl~df~~~~~~~~~~~~~~~-------~~~~~~   78 (224)
                      .|++.++++|++|+++|+.+||... ++|+|||||.+|||+..+|..||||||.++...........       -....|
T Consensus       140 ~lte~eVLkIf~dv~~AVa~mH~~~-pPiIHRDLKiENvLls~~g~~KLCDFGSatt~~~~~~~~~e~~~ve~eI~k~TT  218 (738)
T KOG1989|consen  140 RLTEDEVLKIFYDVCEAVAAMHYLK-PPIIHRDLKIENVLLSADGNYKLCDFGSATTKILSPTSAQEVNYVEEEIEKYTT  218 (738)
T ss_pred             cCChHHHHHHHHHHHHHHHHHhcCC-CccchhhhhhhheEEcCCCCEEeCcccccccccCCCccHHHHHHHHHHHHhhCC
Confidence            3999999999999999999999986 56999999999999999999999999999754322211000       012468


Q ss_pred             cccCCcccc---cCCCcccccceEehhHHHHHHHhcccCCCCcCCCcccccccccCCCccccCccccCCcCHHHHHHHHH
Q 041793           79 YGYMAPEYA---SDGKFSVKSDVFSFGILLLEIISGKKNRGFYHSDNKLNLIGHVSMPSQLIDPCIQGSFNLVEVIRCIH  155 (224)
Q Consensus        79 ~~y~aPE~~---~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  155 (224)
                      +.|++||.+   .+.+++.|+|||||||+||.|+....||+....-.+.    ...  ..++       ....+..++.+
T Consensus       219 p~YRsPEMIDlysg~pI~eKsDIWALGclLYkLCy~t~PFe~sg~laIl----ng~--Y~~P-------~~p~ys~~l~~  285 (738)
T KOG1989|consen  219 PQYRSPEMIDLYSGLPIGEKSDIWALGCLLYKLCYFTTPFEESGKLAIL----NGN--YSFP-------PFPNYSDRLKD  285 (738)
T ss_pred             ccccChHHHhhhcCCCCcchhHHHHHHHHHHHHHHhCCCcCcCcceeEE----ecc--ccCC-------CCccHHHHHHH
Confidence            899999976   5778899999999999999999999998653221111    111  1111       11334567889


Q ss_pred             HHHHhccCCCCCCCChHHHHHHhccC
Q 041793          156 IGLLCVQQHPKDRPSMPSVILMLGSE  181 (224)
Q Consensus       156 li~~cl~~dp~~Rps~~~v~~~L~~~  181 (224)
                      ||..||+.||++||++-+|+..+...
T Consensus       286 LI~~mL~~nP~~RPnI~Qv~~~~~~l  311 (738)
T KOG1989|consen  286 LIRTMLQPNPDERPNIYQVLEEIFEL  311 (738)
T ss_pred             HHHHHhccCcccCCCHHHHHHHHHHH
Confidence            99999999999999999999987554


No 40 
>cd05091 PTKc_Ror2 Catalytic domain of the Protein Tyrosine Kinase, Receptor tyrosine kinase-like Orphan Receptor 2. Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor 2 (Ror2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase cataly
Probab=99.96  E-value=2.3e-29  Score=200.90  Aligned_cols=164  Identities=27%  Similarity=0.434  Sum_probs=122.9

Q ss_pred             CCCCChHHHHHHHHHHHHHHhhhhcCCCCceEecCCCCCceEECCCCCceEeeecceeecCCCCCCCcccccccccccCC
Q 041793            4 CKILDWPKRFHIICGTARGVMYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDEIEGNTNRVIGTYGYMA   83 (224)
Q Consensus         4 ~~~l~~~~~~~i~~qi~~~l~~Lh~~~~~~i~H~dl~~~nil~~~~~~~kl~df~~~~~~~~~~~~~~~~~~~~~~~y~a   83 (224)
                      ...+++..++.++.|++.||.|||+.|   ++||||||.||+++.++.+||+|||++................++..|+|
T Consensus       118 ~~~~~~~~~~~~~~ql~~aL~~lH~~g---i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~a  194 (283)
T cd05091         118 KSTLEPADFVHIVTQIAAGMEFLSSHH---VVHKDLATRNVLVFDKLNVKISDLGLFREVYAADYYKLMGNSLLPIRWMS  194 (283)
T ss_pred             ccccCHHHHHHHHHHHHHHHHHHHHcC---ccccccchhheEecCCCceEecccccccccccchheeeccCccCCccccC
Confidence            346889999999999999999999999   99999999999999999999999999876533221111122334668999


Q ss_pred             cccccCCCcccccceEehhHHHHHHHh-cccCCCCcCCCcccccccccCCCccccCccccCCcCHHHHHHHHHHHHHhcc
Q 041793           84 PEYASDGKFSVKSDVFSFGILLLEIIS-GKKNRGFYHSDNKLNLIGHVSMPSQLIDPCIQGSFNLVEVIRCIHIGLLCVQ  162 (224)
Q Consensus        84 PE~~~~~~~~~~~Di~slG~il~~l~~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~  162 (224)
                      ||.+.+..++.++|+||||+++++|++ |..||...........+   ......  + .....+    ..+.+++.+||+
T Consensus       195 PE~~~~~~~~~~~Dv~slG~~l~el~~~g~~p~~~~~~~~~~~~i---~~~~~~--~-~~~~~~----~~~~~li~~cl~  264 (283)
T cd05091         195 PEAIMYGKFSIDSDIWSYGVVLWEVFSYGLQPYCGYSNQDVIEMI---RNRQVL--P-CPDDCP----AWVYTLMLECWN  264 (283)
T ss_pred             HHHHhcCCCCcchhHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHH---HcCCcC--C-CCCCCC----HHHHHHHHHHhC
Confidence            999988889999999999999999998 77787654332222211   111110  0 011111    236688899999


Q ss_pred             CCCCCCCChHHHHHHhcc
Q 041793          163 QHPKDRPSMPSVILMLGS  180 (224)
Q Consensus       163 ~dp~~Rps~~~v~~~L~~  180 (224)
                      .+|++||++++|++.|+.
T Consensus       265 ~~p~~RP~~~~i~~~l~~  282 (283)
T cd05091         265 EFPSRRPRFKDIHSRLRT  282 (283)
T ss_pred             CCcccCCCHHHHHHHhhC
Confidence            999999999999999853


No 41 
>cd05109 PTKc_HER2 Catalytic domain of the Protein Tyrosine Kinase, HER2. Protein Tyrosine Kinase (PTK) family; HER2 (ErbB2, HER2/neu); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER2 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve
Probab=99.96  E-value=3e-29  Score=199.95  Aligned_cols=168  Identities=25%  Similarity=0.317  Sum_probs=126.0

Q ss_pred             CCCCChHHHHHHHHHHHHHHhhhhcCCCCceEecCCCCCceEECCCCCceEeeecceeecCCCCCCCcccccccccccCC
Q 041793            4 CKILDWPKRFHIICGTARGVMYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDEIEGNTNRVIGTYGYMA   83 (224)
Q Consensus         4 ~~~l~~~~~~~i~~qi~~~l~~Lh~~~~~~i~H~dl~~~nil~~~~~~~kl~df~~~~~~~~~~~~~~~~~~~~~~~y~a   83 (224)
                      .+.+++.+++.++.||+.||.|||+.+   ++|+||||+||+++.++.++|+|||++................++..|++
T Consensus       103 ~~~~~~~~~~~~~~qi~~~L~~lH~~~---iiH~dlkp~Nil~~~~~~~kL~dfG~~~~~~~~~~~~~~~~~~~~~~y~~  179 (279)
T cd05109         103 KDRIGSQDLLNWCVQIAKGMSYLEEVR---LVHRDLAARNVLVKSPNHVKITDFGLARLLDIDETEYHADGGKVPIKWMA  179 (279)
T ss_pred             cCCCCHHHHHHHHHHHHHHHHHHHHCC---eeccccccceEEEcCCCcEEECCCCceeecccccceeecCCCccchhhCC
Confidence            456899999999999999999999999   99999999999999999999999999987643222111111233567999


Q ss_pred             cccccCCCcccccceEehhHHHHHHHh-cccCCCCcCCCcccccccccCCCccccCccccCCcCHHHHHHHHHHHHHhcc
Q 041793           84 PEYASDGKFSVKSDVFSFGILLLEIIS-GKKNRGFYHSDNKLNLIGHVSMPSQLIDPCIQGSFNLVEVIRCIHIGLLCVQ  162 (224)
Q Consensus        84 PE~~~~~~~~~~~Di~slG~il~~l~~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~  162 (224)
                      ||...+..++.++|+|||||++|++++ |..||...........+....   ....   ....    ...+.+++.+||+
T Consensus       180 PE~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~~~~~~~~~~~~~---~~~~---~~~~----~~~~~~li~~~l~  249 (279)
T cd05109         180 LESILHRRFTHQSDVWSYGVTVWELMTFGAKPYDGIPAREIPDLLEKGE---RLPQ---PPIC----TIDVYMIMVKCWM  249 (279)
T ss_pred             HHHhccCCCCchhHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHHCCC---cCCC---CccC----CHHHHHHHHHHcC
Confidence            999988889999999999999999998 888875433222222111111   1000   0111    1346788899999


Q ss_pred             CCCCCCCChHHHHHHhccCCCC
Q 041793          163 QHPKDRPSMPSVILMLGSEIVL  184 (224)
Q Consensus       163 ~dp~~Rps~~~v~~~L~~~~~~  184 (224)
                      .||++||++.+++..|+.....
T Consensus       250 ~dp~~Rp~~~~l~~~l~~~~~~  271 (279)
T cd05109         250 IDSECRPRFRELVDEFSRMARD  271 (279)
T ss_pred             CChhhCcCHHHHHHHHHHhhcC
Confidence            9999999999999998766433


No 42 
>cd05049 PTKc_Trk Catalytic domain of the Protein Tyrosine Kinases, Tropomyosin Related Kinases. Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase (Trk) subfamily; catalytic (c) domain. The Trk subfamily consists of TrkA, TrkB, TrkC, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Trk subfamily members are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, the nerve growth factor (NGF) family of neutrotrophins, leads to Trk receptor oligomerization and activation of the catalyt
Probab=99.96  E-value=5.1e-29  Score=198.48  Aligned_cols=163  Identities=26%  Similarity=0.387  Sum_probs=124.0

Q ss_pred             CCCCChHHHHHHHHHHHHHHhhhhcCCCCceEecCCCCCceEECCCCCceEeeecceeecCCCCCCCcccccccccccCC
Q 041793            4 CKILDWPKRFHIICGTARGVMYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDEIEGNTNRVIGTYGYMA   83 (224)
Q Consensus         4 ~~~l~~~~~~~i~~qi~~~l~~Lh~~~~~~i~H~dl~~~nil~~~~~~~kl~df~~~~~~~~~~~~~~~~~~~~~~~y~a   83 (224)
                      ...+++.+++.++.||+.||.|||++|   ++|+||+|+||+++.++.++|+|||++................++..|+|
T Consensus       116 ~~~l~~~~~~~~~~~i~~~l~~lH~~~---i~h~dlkp~nili~~~~~~kl~d~g~~~~~~~~~~~~~~~~~~~~~~y~a  192 (280)
T cd05049         116 MGELTLSQLLQIAVQIASGMVYLASQH---FVHRDLATRNCLVGYDLVVKIGDFGMSRDVYTTDYYRVGGHTMLPIRWMP  192 (280)
T ss_pred             cccccHHHHHHHHHHHHHHHHHHhhCC---eeccccccceEEEcCCCeEEECCcccceecccCcceecCCCCcccceecC
Confidence            356889999999999999999999999   99999999999999999999999999876432221111222334678999


Q ss_pred             cccccCCCcccccceEehhHHHHHHHh-cccCCCCcCCCcccccccccCCCccccCccccCCcCHHHHHHHHHHHHHhcc
Q 041793           84 PEYASDGKFSVKSDVFSFGILLLEIIS-GKKNRGFYHSDNKLNLIGHVSMPSQLIDPCIQGSFNLVEVIRCIHIGLLCVQ  162 (224)
Q Consensus        84 PE~~~~~~~~~~~Di~slG~il~~l~~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~  162 (224)
                      ||.+.+..++.++|+||||+++++|++ |..||...........+.....    ..  .....    ...+.+++.+||+
T Consensus       193 PE~~~~~~~~~~~Di~slG~il~e~~~~g~~p~~~~~~~~~~~~~~~~~~----~~--~~~~~----~~~~~~li~~~l~  262 (280)
T cd05049         193 PESIMYRKFTTESDVWSFGVVLWEIFTYGKQPWYGLSNEEVIECITQGRL----LQ--RPRTC----PSEVYDIMLGCWK  262 (280)
T ss_pred             hhhhccCCcchhhhHHHHHHHHHHHHhcCCCCCCCCCHHHHHHHHHcCCc----CC--CCCCC----CHHHHHHHHHHcC
Confidence            999999999999999999999999998 9999754433322221111110    00  01111    1346789999999


Q ss_pred             CCCCCCCChHHHHHHhc
Q 041793          163 QHPKDRPSMPSVILMLG  179 (224)
Q Consensus       163 ~dp~~Rps~~~v~~~L~  179 (224)
                      .||++||+++||++.|+
T Consensus       263 ~~p~~Rp~~~eil~~l~  279 (280)
T cd05049         263 RDPQQRINIKDIHERLQ  279 (280)
T ss_pred             CCcccCCCHHHHHHHhh
Confidence            99999999999999885


No 43 
>KOG0585 consensus Ca2+/calmodulin-dependent protein kinase kinase beta and related serine/threonine protein kinases [Signal transduction mechanisms]
Probab=99.96  E-value=1.9e-29  Score=204.26  Aligned_cols=161  Identities=28%  Similarity=0.415  Sum_probs=122.6

Q ss_pred             CC-CChHHHHHHHHHHHHHHhhhhcCCCCceEecCCCCCceEECCCCCceEeeecceeecCCCCC---CCcccccccccc
Q 041793            5 KI-LDWPKRFHIICGTARGVMYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDEI---EGNTNRVIGTYG   80 (224)
Q Consensus         5 ~~-l~~~~~~~i~~qi~~~l~~Lh~~~~~~i~H~dl~~~nil~~~~~~~kl~df~~~~~~~~~~~---~~~~~~~~~~~~   80 (224)
                      +. |++.+.+.++.+++.||+|||.+|   |+||||||+|+|++.+|.+|++|||.+..+.....   .......+||+.
T Consensus       204 ~~els~~~Ar~ylrDvv~GLEYLH~Qg---iiHRDIKPsNLLl~~~g~VKIsDFGVs~~~~~~~~~~~d~~L~~tvGTPA  280 (576)
T KOG0585|consen  204 KPELSEQQARKYLRDVVLGLEYLHYQG---IIHRDIKPSNLLLSSDGTVKISDFGVSNEFPQGSDEGSDDQLSRTVGTPA  280 (576)
T ss_pred             cccccHHHHHHHHHHHHHHHHHHHhcC---eeccccchhheEEcCCCcEEeeccceeeecccCCccccHHHHhhcCCCcc
Confidence            44 889999999999999999999999   99999999999999999999999999987743211   122234689999


Q ss_pred             cCCcccccCCC---c-ccccceEehhHHHHHHHhcccCCCCcCCCcccccccc-cCCCccccCccccCCcCHHHHHHHHH
Q 041793           81 YMAPEYASDGK---F-SVKSDVFSFGILLLEIISGKKNRGFYHSDNKLNLIGH-VSMPSQLIDPCIQGSFNLVEVIRCIH  155 (224)
Q Consensus        81 y~aPE~~~~~~---~-~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~  155 (224)
                      |+|||...++.   + +.+.||||+|+.+|.|+.|+.||-.   +....+... ++.+-..+..       .+.-..+.+
T Consensus       281 F~APE~c~~~~~~~~~g~a~DiWalGVTLYCllfG~~PF~~---~~~~~l~~KIvn~pL~fP~~-------pe~~e~~kD  350 (576)
T KOG0585|consen  281 FFAPELCSGGNSFSYSGFALDIWALGVTLYCLLFGQLPFFD---DFELELFDKIVNDPLEFPEN-------PEINEDLKD  350 (576)
T ss_pred             ccchHhhcCCCCccccchhhhhhhhhhhHHHhhhccCCccc---chHHHHHHHHhcCcccCCCc-------ccccHHHHH
Confidence            99999987633   3 4789999999999999999999743   222222222 2222222111       112235668


Q ss_pred             HHHHhccCCCCCCCChHHHHHHh
Q 041793          156 IGLLCVQQHPKDRPSMPSVILML  178 (224)
Q Consensus       156 li~~cl~~dp~~Rps~~~v~~~L  178 (224)
                      ||+++|+.||++|.++.+|....
T Consensus       351 li~~lL~KdP~~Ri~l~~ik~Hp  373 (576)
T KOG0585|consen  351 LIKRLLEKDPEQRITLPDIKLHP  373 (576)
T ss_pred             HHHHHhhcChhheeehhhheecc
Confidence            99999999999999999987654


No 44 
>KOG0201 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.96  E-value=2.4e-29  Score=201.83  Aligned_cols=159  Identities=30%  Similarity=0.470  Sum_probs=129.8

Q ss_pred             CCCCChHHHHHHHHHHHHHHhhhhcCCCCceEecCCCCCceEECCCCCceEeeecceeecCCCCCCCcccccccccccCC
Q 041793            4 CKILDWPKRFHIICGTARGVMYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDEIEGNTNRVIGTYGYMA   83 (224)
Q Consensus         4 ~~~l~~~~~~~i~~qi~~~l~~Lh~~~~~~i~H~dl~~~nil~~~~~~~kl~df~~~~~~~~~~~~~~~~~~~~~~~y~a   83 (224)
                      +..+.+..+.-++.+++.||.|||.++   .+|+|||+.||++..+|.+||+|||++..+.......  .+++||+.|+|
T Consensus       105 ~~~~~E~~i~~ilre~l~~l~ylH~~~---kiHrDIKaanil~s~~g~vkl~DfgVa~ql~~~~~rr--~tfvGTPfwMA  179 (467)
T KOG0201|consen  105 GNILDEFEIAVILREVLKGLDYLHSEK---KIHRDIKAANILLSESGDVKLADFGVAGQLTNTVKRR--KTFVGTPFWMA  179 (467)
T ss_pred             CCCCccceeeeehHHHHHHhhhhhhcc---eecccccccceeEeccCcEEEEecceeeeeechhhcc--ccccccccccc
Confidence            344577788889999999999999999   9999999999999999999999999998876543332  55799999999


Q ss_pred             cccccCCCcccccceEehhHHHHHHHhcccCCCCcCCCcccccccccCCCccccCccccCCcCHHHHHHHHHHHHHhccC
Q 041793           84 PEYASDGKFSVKSDVFSFGILLLEIISGKKNRGFYHSDNKLNLIGHVSMPSQLIDPCIQGSFNLVEVIRCIHIGLLCVQQ  163 (224)
Q Consensus        84 PE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~  163 (224)
                      ||++++..|+.|+||||||+..+||.+|.+|+...++.....++.+..      ++.+...+.    ..+.+++..||..
T Consensus       180 PEVI~~~~Y~~KADIWSLGITaiEla~GePP~s~~hPmrvlflIpk~~------PP~L~~~~S----~~~kEFV~~CL~k  249 (467)
T KOG0201|consen  180 PEVIKQSGYDTKADIWSLGITAIELAKGEPPHSKLHPMRVLFLIPKSA------PPRLDGDFS----PPFKEFVEACLDK  249 (467)
T ss_pred             hhhhccccccchhhhhhhhHHHHHHhcCCCCCcccCcceEEEeccCCC------CCccccccC----HHHHHHHHHHhhc
Confidence            999998899999999999999999999999998777754444332222      222333222    2366788899999


Q ss_pred             CCCCCCChHHHHHH
Q 041793          164 HPKDRPSMPSVILM  177 (224)
Q Consensus       164 dp~~Rps~~~v~~~  177 (224)
                      ||+.|||+.++++.
T Consensus       250 ~P~~RpsA~~LLKh  263 (467)
T KOG0201|consen  250 NPEFRPSAKELLKH  263 (467)
T ss_pred             CcccCcCHHHHhhh
Confidence            99999999999873


No 45 
>cd05093 PTKc_TrkB Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase B. Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase B (TrkB); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkB is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkB to its ligands, brain-derived neurotrophic factor (BDNF) or neurotrophin 4 (NT4), results in receptor oligomerization and activation of the catalytic domain. TrkB is broadly 
Probab=99.96  E-value=4e-29  Score=200.24  Aligned_cols=165  Identities=25%  Similarity=0.379  Sum_probs=124.9

Q ss_pred             CCCChHHHHHHHHHHHHHHhhhhcCCCCceEecCCCCCceEECCCCCceEeeecceeecCCCCCCCcccccccccccCCc
Q 041793            5 KILDWPKRFHIICGTARGVMYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDEIEGNTNRVIGTYGYMAP   84 (224)
Q Consensus         5 ~~l~~~~~~~i~~qi~~~l~~Lh~~~~~~i~H~dl~~~nil~~~~~~~kl~df~~~~~~~~~~~~~~~~~~~~~~~y~aP   84 (224)
                      ..+++.+++.++.||+.||+|||+.|   ++||||+|+||+++.++.++|+|||++................++..|+||
T Consensus       115 ~~l~~~~~~~~~~ql~~aL~~lH~~~---i~H~dlkp~Nili~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~aP  191 (288)
T cd05093         115 AELTQSQMLHIAQQIAAGMVYLASQH---FVHRDLATRNCLVGENLLVKIGDFGMSRDVYSTDYYRVGGHTMLPIRWMPP  191 (288)
T ss_pred             CCCCHHHHHHHHHHHHHHHHHHHhCC---eeecccCcceEEEccCCcEEeccCCccccccCCceeecCCCCCccccccCH
Confidence            45999999999999999999999999   999999999999999999999999998765322211112223346689999


Q ss_pred             ccccCCCcccccceEehhHHHHHHHh-cccCCCCcCCCcccccccccCCCccccCccccCCcCHHHHHHHHHHHHHhccC
Q 041793           85 EYASDGKFSVKSDVFSFGILLLEIIS-GKKNRGFYHSDNKLNLIGHVSMPSQLIDPCIQGSFNLVEVIRCIHIGLLCVQQ  163 (224)
Q Consensus        85 E~~~~~~~~~~~Di~slG~il~~l~~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~  163 (224)
                      |.+.+..++.++|+||||+++++|++ |..||...........+....    ...  .....+    ..+.+|+.+||+.
T Consensus       192 E~~~~~~~~~~sDiwslG~il~~l~t~g~~p~~~~~~~~~~~~i~~~~----~~~--~~~~~~----~~l~~li~~~l~~  261 (288)
T cd05093         192 ESIMYRKFTTESDVWSLGVVLWEIFTYGKQPWYQLSNNEVIECITQGR----VLQ--RPRTCP----KEVYDLMLGCWQR  261 (288)
T ss_pred             HHhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHcCC----cCC--CCCCCC----HHHHHHHHHHccC
Confidence            99988888999999999999999998 888875433222111111111    000  011111    2467899999999


Q ss_pred             CCCCCCChHHHHHHhccCC
Q 041793          164 HPKDRPSMPSVILMLGSEI  182 (224)
Q Consensus       164 dp~~Rps~~~v~~~L~~~~  182 (224)
                      ||.+|||+++|.+.|+...
T Consensus       262 ~p~~Rpt~~~v~~~l~~~~  280 (288)
T cd05093         262 EPHMRLNIKEIHSLLQNLA  280 (288)
T ss_pred             ChhhCCCHHHHHHHHHHHH
Confidence            9999999999999997764


No 46 
>cd05051 PTKc_DDR Catalytic domain of the Protein Tyrosine Kinases, Discoidin Domain Receptors. Protein Tyrosine Kinase (PTK) family; Discoidin Domain Receptor (DDR) subfamily; catalytic (c) domain. The DDR subfamily consists of homologs of mammalian DDR1, DDR2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR subfamily members are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDRs regulate cell adhesion, proliferation, and extracellular matrix remodeling. They have been linke
Probab=99.96  E-value=6.7e-29  Score=199.39  Aligned_cols=170  Identities=25%  Similarity=0.365  Sum_probs=122.9

Q ss_pred             CCCChHHHHHHHHHHHHHHhhhhcCCCCceEecCCCCCceEECCCCCceEeeecceeecCCCCCCCcccccccccccCCc
Q 041793            5 KILDWPKRFHIICGTARGVMYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDEIEGNTNRVIGTYGYMAP   84 (224)
Q Consensus         5 ~~l~~~~~~~i~~qi~~~l~~Lh~~~~~~i~H~dl~~~nil~~~~~~~kl~df~~~~~~~~~~~~~~~~~~~~~~~y~aP   84 (224)
                      ..+++..++.++.|++.||+|||+.|   ++|+||||+||+++.++.++++|||++................++..|+||
T Consensus       125 ~~~~~~~~~~~~~~i~~al~~LH~~~---i~H~dlkp~Nili~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~y~aP  201 (296)
T cd05051         125 KSLSFSTLLYMATQIASGMRYLESLN---FVHRDLATRNCLVGKNYTIKIADFGMSRNLYSSDYYRVQGRAPLPIRWMAW  201 (296)
T ss_pred             CCCCHHHHHHHHHHHHHHHHHHHHcC---ccccccchhceeecCCCceEEccccceeecccCcceeecCcCCCCceecCH
Confidence            47899999999999999999999999   999999999999999999999999998765433222222233456789999


Q ss_pred             ccccCCCcccccceEehhHHHHHHHh--cccCCCCcCCCcccccccccCCCccccCccccCCcCHHHHHHHHHHHHHhcc
Q 041793           85 EYASDGKFSVKSDVFSFGILLLEIIS--GKKNRGFYHSDNKLNLIGHVSMPSQLIDPCIQGSFNLVEVIRCIHIGLLCVQ  162 (224)
Q Consensus        85 E~~~~~~~~~~~Di~slG~il~~l~~--g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~  162 (224)
                      |.+.+..++.++||||||+++|++++  +..||..................... ......  .......+.+++.+||+
T Consensus       202 E~~~~~~~~~~~Dv~slG~~l~el~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~-~~~~~~--~~~~~~~l~~li~~cl~  278 (296)
T cd05051         202 ESVLLGKFTTKSDVWAFGVTLWEILTLCREQPYEHLTDQQVIENAGHFFRDDGR-QIYLPR--PPNCPKDIYELMLECWR  278 (296)
T ss_pred             HHhhcCCCCccchhhhhHHHHHHHHhcCCCCCCCCcChHHHHHHHHhccccccc-cccCCC--ccCCCHHHHHHHHHHhc
Confidence            99988889999999999999999998  56676443322211111111000000 000000  00111357789999999


Q ss_pred             CCCCCCCChHHHHHHhcc
Q 041793          163 QHPKDRPSMPSVILMLGS  180 (224)
Q Consensus       163 ~dp~~Rps~~~v~~~L~~  180 (224)
                      .||++|||+.+|++.|+.
T Consensus       279 ~~p~~Rpt~~el~~~L~~  296 (296)
T cd05051         279 RDEEDRPTFREIHLFLQR  296 (296)
T ss_pred             cChhcCCCHHHHHHHhcC
Confidence            999999999999999863


No 47 
>cd05035 PTKc_Axl_like Catalytic Domain of Axl-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Axl subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). The Axl subfamily consists of Axl, Tyro3 (or Sky), Mer (or Mertk), and similar proteins. PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Axl subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Axl subfamily members are implicated in a variety of cellu
Probab=99.96  E-value=9.6e-29  Score=196.02  Aligned_cols=164  Identities=24%  Similarity=0.354  Sum_probs=124.4

Q ss_pred             CCCChHHHHHHHHHHHHHHhhhhcCCCCceEecCCCCCceEECCCCCceEeeecceeecCCCCCCCcccccccccccCCc
Q 041793            5 KILDWPKRFHIICGTARGVMYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDEIEGNTNRVIGTYGYMAP   84 (224)
Q Consensus         5 ~~l~~~~~~~i~~qi~~~l~~Lh~~~~~~i~H~dl~~~nil~~~~~~~kl~df~~~~~~~~~~~~~~~~~~~~~~~y~aP   84 (224)
                      ..+++.+++.++.|++.||.|||+.+   ++|+||||+||+++.++.++++|||++.................+..|++|
T Consensus       108 ~~~~~~~~~~~~~~i~~aL~~lH~~~---i~H~dlkp~Nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~p  184 (273)
T cd05035         108 EKLPLQTLLKFMVDIALGMEYLSNRN---FIHRDLAARNCMLREDMTVCVADFGLSKKIYSGDYYRQGRIAKMPVKWIAI  184 (273)
T ss_pred             ccCCHHHHHHHHHHHHHHHHHHHhCC---eeccccchheEEECCCCeEEECCccceeeccccccccccccccCCccccCH
Confidence            46899999999999999999999999   999999999999999999999999999876443222112222345679999


Q ss_pred             ccccCCCcccccceEehhHHHHHHHh-cccCCCCcCCCcccccccccCCCccccCccccCCcCHHHHHHHHHHHHHhccC
Q 041793           85 EYASDGKFSVKSDVFSFGILLLEIIS-GKKNRGFYHSDNKLNLIGHVSMPSQLIDPCIQGSFNLVEVIRCIHIGLLCVQQ  163 (224)
Q Consensus        85 E~~~~~~~~~~~Di~slG~il~~l~~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~  163 (224)
                      |.+.+..++.++|+||||+++|++++ |..||..................      ......    ...+.+++.+||+.
T Consensus       185 e~~~~~~~~~~~Dv~SlG~il~el~~~g~~p~~~~~~~~~~~~~~~~~~~------~~~~~~----~~~~~~li~~~l~~  254 (273)
T cd05035         185 ESLADRVYTSKSDVWAFGVTMWEIATRGQTPYPGVENHEIYDYLRHGNRL------KQPEDC----LDELYDLMYSCWRA  254 (273)
T ss_pred             hhcccCCCCcccchHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHcCCCC------CCCcCC----CHHHHHHHHHHcCC
Confidence            99988889999999999999999998 88887543322211111111100      011111    23577889999999


Q ss_pred             CCCCCCChHHHHHHhccC
Q 041793          164 HPKDRPSMPSVILMLGSE  181 (224)
Q Consensus       164 dp~~Rps~~~v~~~L~~~  181 (224)
                      ||++||++.++++.|+..
T Consensus       255 ~p~~Rp~~~e~~~~l~~~  272 (273)
T cd05035         255 DPKDRPTFTKLREVLENI  272 (273)
T ss_pred             ChhhCcCHHHHHHHHHhh
Confidence            999999999999998754


No 48 
>cd07848 STKc_CDKL5 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase Like 5. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 5 (CDKL5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. Mutations in the gene encoding CDKL5, previously called STK9, are associated with early onset epilepsy and severe mental retardation [X-linked infantile spasm syndrome (ISSX) or West syndrome]. In addition, CDKL5 mutations also sometimes 
Probab=99.96  E-value=3.8e-29  Score=200.06  Aligned_cols=169  Identities=22%  Similarity=0.269  Sum_probs=122.4

Q ss_pred             CCCCChHHHHHHHHHHHHHHhhhhcCCCCceEecCCCCCceEECCCCCceEeeecceeecCCCCCCCcccccccccccCC
Q 041793            4 CKILDWPKRFHIICGTARGVMYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDEIEGNTNRVIGTYGYMA   83 (224)
Q Consensus         4 ~~~l~~~~~~~i~~qi~~~l~~Lh~~~~~~i~H~dl~~~nil~~~~~~~kl~df~~~~~~~~~~~~~~~~~~~~~~~y~a   83 (224)
                      ...+++..++.++.||+.||.|||+.+   ++|+||||+||+++.++.++|+|||++......... ......++..|+|
T Consensus        94 ~~~~~~~~~~~~~~qi~~~L~~lH~~~---i~H~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~~~~-~~~~~~~~~~y~a  169 (287)
T cd07848          94 PNGVPPEKVRSYIYQLIKAIHWCHKND---IVHRDIKPENLLISHNDVLKLCDFGFARNLSEGSNA-NYTEYVATRWYRS  169 (287)
T ss_pred             CCCCCHHHHHHHHHHHHHHHHHHHHCC---eecCCCCHHHEEEcCCCcEEEeeccCcccccccccc-cccccccccccCC
Confidence            456899999999999999999999999   999999999999999999999999999875432211 1223467889999


Q ss_pred             cccccCCCcccccceEehhHHHHHHHhcccCCCCcCCCcccccccccC--CC-------------ccccCccccCCcCH-
Q 041793           84 PEYASDGKFSVKSDVFSFGILLLEIISGKKNRGFYHSDNKLNLIGHVS--MP-------------SQLIDPCIQGSFNL-  147 (224)
Q Consensus        84 PE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~--~~-------------~~~~~~~~~~~~~~-  147 (224)
                      ||.+.+..++.++|+|||||++|+|++|+.||......+....+....  .+             .....+........ 
T Consensus       170 PE~~~~~~~~~~~DiwslGvil~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  249 (287)
T cd07848         170 PELLLGAPYGKAVDMWSVGCILGELSDGQPLFPGESEIDQLFTIQKVLGPLPAEQMKLFYSNPRFHGLRFPAVNHPQSLE  249 (287)
T ss_pred             cHHHcCCCCCCchhHHhHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhhCCCCHHHHHhhhccchhcccccCcccCcccHH
Confidence            999988889999999999999999999999986533221111000000  00             00000000000000 


Q ss_pred             -----HHHHHHHHHHHHhccCCCCCCCChHHHHH
Q 041793          148 -----VEVIRCIHIGLLCVQQHPKDRPSMPSVIL  176 (224)
Q Consensus       148 -----~~~~~~~~li~~cl~~dp~~Rps~~~v~~  176 (224)
                           .....+.+|+.+||+.||++|||++++++
T Consensus       250 ~~~~~~~s~~~~dll~~~L~~~P~~R~s~~~~l~  283 (287)
T cd07848         250 RRYLGILSGVLLDLMKNLLKLNPTDRYLTEQCLN  283 (287)
T ss_pred             HhhhcccCHHHHHHHHHHccCCcccCCCHHHHhc
Confidence                 01134788999999999999999999875


No 49 
>cd07868 STKc_CDK8 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 8. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 8 (CDK8) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK8 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK8 can act as a negative or positive regulator of transcription, depending on the scenario. Together with its regulator, cyclin C, it reversibly associates with the multi-subunit core Mediator complex, a cofactor that is involved in regulating RNA p
Probab=99.96  E-value=5.9e-29  Score=201.74  Aligned_cols=111  Identities=25%  Similarity=0.421  Sum_probs=92.7

Q ss_pred             CCCChHHHHHHHHHHHHHHhhhhcCCCCceEecCCCCCceEE----CCCCCceEeeecceeecCCCCCC-Cccccccccc
Q 041793            5 KILDWPKRFHIICGTARGVMYLHQDSRLRIIHRDLKASNVLL----DQDMNPKISDFGLARAFGGDEIE-GNTNRVIGTY   79 (224)
Q Consensus         5 ~~l~~~~~~~i~~qi~~~l~~Lh~~~~~~i~H~dl~~~nil~----~~~~~~kl~df~~~~~~~~~~~~-~~~~~~~~~~   79 (224)
                      ..+++..+..++.||+.||.|||+.|   |+||||||+||++    +..+.+||+|||++......... .......++.
T Consensus       103 ~~l~~~~~~~i~~qi~~al~~LH~~~---ivHrDlkp~Nil~~~~~~~~~~~kl~DfG~a~~~~~~~~~~~~~~~~~~t~  179 (317)
T cd07868         103 VQLPRGMVKSLLYQILDGIHYLHANW---VLHRDLKPANILVMGEGPERGRVKIADMGFARLFNSPLKPLADLDPVVVTF  179 (317)
T ss_pred             ccCCHHHHHHHHHHHHHHHHHHHhCC---EEcCCCCHHHEEEecCCCCcCcEEEeecCceeccCCCCccccccCCccccc
Confidence            46899999999999999999999999   9999999999999    45678999999999875432211 1122346788


Q ss_pred             ccCCcccccCC-CcccccceEehhHHHHHHHhcccCCCCc
Q 041793           80 GYMAPEYASDG-KFSVKSDVFSFGILLLEIISGKKNRGFY  118 (224)
Q Consensus        80 ~y~aPE~~~~~-~~~~~~Di~slG~il~~l~~g~~p~~~~  118 (224)
                      .|+|||.+.+. .++.++|+||+||++++|++|+.||...
T Consensus       180 ~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~~f~~~  219 (317)
T cd07868         180 WYRAPELLLGARHYTKAIDIWAIGCIFAELLTSEPIFHCR  219 (317)
T ss_pred             cccCCHHHcCCCCcCchhhHHHHHHHHHHHHhCCCCccCC
Confidence            99999998764 5789999999999999999999998643


No 50 
>PTZ00284 protein kinase; Provisional
Probab=99.96  E-value=1.6e-29  Score=215.33  Aligned_cols=165  Identities=19%  Similarity=0.273  Sum_probs=120.6

Q ss_pred             CCCCChHHHHHHHHHHHHHHhhhhc-CCCCceEecCCCCCceEECCCC----------------CceEeeecceeecCCC
Q 041793            4 CKILDWPKRFHIICGTARGVMYLHQ-DSRLRIIHRDLKASNVLLDQDM----------------NPKISDFGLARAFGGD   66 (224)
Q Consensus         4 ~~~l~~~~~~~i~~qi~~~l~~Lh~-~~~~~i~H~dl~~~nil~~~~~----------------~~kl~df~~~~~~~~~   66 (224)
                      .+.+++..+..++.||+.||.|||+ .|   |+||||||+||+++.++                .+||+|||.+..... 
T Consensus       225 ~~~l~~~~~~~i~~qi~~aL~yLH~~~g---IiHrDlKP~NILl~~~~~~~~~~~~~~~~~~~~~vkl~DfG~~~~~~~-  300 (467)
T PTZ00284        225 HGPFSHRHLAQIIFQTGVALDYFHTELH---LMHTDLKPENILMETSDTVVDPVTNRALPPDPCRVRICDLGGCCDERH-  300 (467)
T ss_pred             cCCCCHHHHHHHHHHHHHHHHHHHhcCC---eecCCCCHHHEEEecCCcccccccccccCCCCceEEECCCCccccCcc-
Confidence            4578999999999999999999998 48   99999999999998765                489999998754221 


Q ss_pred             CCCCcccccccccccCCcccccCCCcccccceEehhHHHHHHHhcccCCCCcCCCcccccccccC--CCccc--------
Q 041793           67 EIEGNTNRVIGTYGYMAPEYASDGKFSVKSDVFSFGILLLEIISGKKNRGFYHSDNKLNLIGHVS--MPSQL--------  136 (224)
Q Consensus        67 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~--~~~~~--------  136 (224)
                          ......++..|+|||++.+..++.++|||||||++|||++|+.||......+....+....  .+...        
T Consensus       301 ----~~~~~~gt~~Y~APE~~~~~~~~~~~DiwSlGvil~elltG~~pf~~~~~~~~~~~i~~~~g~~p~~~~~~~~~~~  376 (467)
T PTZ00284        301 ----SRTAIVSTRHYRSPEVVLGLGWMYSTDMWSMGCIIYELYTGKLLYDTHDNLEHLHLMEKTLGRLPSEWAGRCGTEE  376 (467)
T ss_pred             ----ccccccCCccccCcHHhhcCCCCcHHHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHcCCCCHHHHhhccchh
Confidence                1233567899999999999999999999999999999999999997544322211111100  00000        


Q ss_pred             ----------cCccc-----------cCCcCHHHHHHHHHHHHHhccCCCCCCCChHHHHH
Q 041793          137 ----------IDPCI-----------QGSFNLVEVIRCIHIGLLCVQQHPKDRPSMPSVIL  176 (224)
Q Consensus       137 ----------~~~~~-----------~~~~~~~~~~~~~~li~~cl~~dp~~Rps~~~v~~  176 (224)
                                ..++.           .......+...+++||.+||++||++|||++|+++
T Consensus       377 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dli~~mL~~dP~~R~ta~e~L~  437 (467)
T PTZ00284        377 ARLLYNSAGQLRPCTDPKHLARIARARPVREVIRDDLLCDLIYGLLHYDRQKRLNARQMTT  437 (467)
T ss_pred             HHHHhhhcccccccCCHHHHHhhhcccchhhhhchHHHHHHHHHhCCcChhhCCCHHHHhc
Confidence                      00000           00001112345679999999999999999999987


No 51 
>PTZ00283 serine/threonine protein kinase; Provisional
Probab=99.96  E-value=5e-29  Score=213.30  Aligned_cols=161  Identities=25%  Similarity=0.354  Sum_probs=124.3

Q ss_pred             CCCCChHHHHHHHHHHHHHHhhhhcCCCCceEecCCCCCceEECCCCCceEeeecceeecCCCCCCCcccccccccccCC
Q 041793            4 CKILDWPKRFHIICGTARGVMYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDEIEGNTNRVIGTYGYMA   83 (224)
Q Consensus         4 ~~~l~~~~~~~i~~qi~~~l~~Lh~~~~~~i~H~dl~~~nil~~~~~~~kl~df~~~~~~~~~~~~~~~~~~~~~~~y~a   83 (224)
                      .+.+++..++.++.|++.||.|||+.+   |+||||||+||+++.++.+||+|||+++.+.............|+..|+|
T Consensus       137 ~~~l~e~~~~~i~~qll~aL~~lH~~~---IiHrDLKP~NILl~~~~~vkL~DFGls~~~~~~~~~~~~~~~~Gt~~Y~a  213 (496)
T PTZ00283        137 NRTFREHEAGLLFIQVLLAVHHVHSKH---MIHRDIKSANILLCSNGLVKLGDFGFSKMYAATVSDDVGRTFCGTPYYVA  213 (496)
T ss_pred             CCCCCHHHHHHHHHHHHHHHHHHHhCC---EecCCCCHHHEEEeCCCCEEEEecccCeeccccccccccccccCCcceeC
Confidence            457899999999999999999999999   99999999999999999999999999987643322222334568889999


Q ss_pred             cccccCCCcccccceEehhHHHHHHHhcccCCCCcCCCcccccccccCCCccccCccccCCcCHHHHHHHHHHHHHhccC
Q 041793           84 PEYASDGKFSVKSDVFSFGILLLEIISGKKNRGFYHSDNKLNLIGHVSMPSQLIDPCIQGSFNLVEVIRCIHIGLLCVQQ  163 (224)
Q Consensus        84 PE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~  163 (224)
                      ||.+.+..++.++||||||+++|+|++|+.||.......   .+........  ++ .....+    ..+.+++.+||+.
T Consensus       214 PE~~~~~~~s~k~DVwSlGvilyeLltG~~Pf~~~~~~~---~~~~~~~~~~--~~-~~~~~~----~~l~~li~~~L~~  283 (496)
T PTZ00283        214 PEIWRRKPYSKKADMFSLGVLLYELLTLKRPFDGENMEE---VMHKTLAGRY--DP-LPPSIS----PEMQEIVTALLSS  283 (496)
T ss_pred             HHHhCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCCCHHH---HHHHHhcCCC--CC-CCCCCC----HHHHHHHHHHccc
Confidence            999999889999999999999999999999986433211   1111110000  00 111111    3467889999999


Q ss_pred             CCCCCCChHHHHHH
Q 041793          164 HPKDRPSMPSVILM  177 (224)
Q Consensus       164 dp~~Rps~~~v~~~  177 (224)
                      ||++||++.++++.
T Consensus       284 dP~~RPs~~ell~~  297 (496)
T PTZ00283        284 DPKRRPSSSKLLNM  297 (496)
T ss_pred             ChhhCcCHHHHHhC
Confidence            99999999999763


No 52 
>PTZ00263 protein kinase A catalytic subunit; Provisional
Probab=99.96  E-value=2.1e-28  Score=199.79  Aligned_cols=155  Identities=25%  Similarity=0.256  Sum_probs=119.7

Q ss_pred             CCCCChHHHHHHHHHHHHHHhhhhcCCCCceEecCCCCCceEECCCCCceEeeecceeecCCCCCCCcccccccccccCC
Q 041793            4 CKILDWPKRFHIICGTARGVMYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDEIEGNTNRVIGTYGYMA   83 (224)
Q Consensus         4 ~~~l~~~~~~~i~~qi~~~l~~Lh~~~~~~i~H~dl~~~nil~~~~~~~kl~df~~~~~~~~~~~~~~~~~~~~~~~y~a   83 (224)
                      .+.+++..+..++.||+.||.|||+.|   |+||||||+||+++.++.++|+|||++......     .....|++.|+|
T Consensus       112 ~~~~~~~~~~~~~~qi~~aL~~LH~~~---ivH~dlkp~NIll~~~~~~kl~Dfg~~~~~~~~-----~~~~~gt~~y~a  183 (329)
T PTZ00263        112 AGRFPNDVAKFYHAELVLAFEYLHSKD---IIYRDLKPENLLLDNKGHVKVTDFGFAKKVPDR-----TFTLCGTPEYLA  183 (329)
T ss_pred             cCCCCHHHHHHHHHHHHHHHHHHHHCC---eeecCCCHHHEEECCCCCEEEeeccCceEcCCC-----cceecCChhhcC
Confidence            457889999999999999999999999   999999999999999999999999999865332     123467889999


Q ss_pred             cccccCCCcccccceEehhHHHHHHHhcccCCCCcCCCcccccccccCCCccccCccccCCcCHHHHHHHHHHHHHhccC
Q 041793           84 PEYASDGKFSVKSDVFSFGILLLEIISGKKNRGFYHSDNKLNLIGHVSMPSQLIDPCIQGSFNLVEVIRCIHIGLLCVQQ  163 (224)
Q Consensus        84 PE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~  163 (224)
                      ||.+.+..++.++|+|||||++|+|++|..||.......   ....+... ..   ..+...+    ..+.+|+.+||+.
T Consensus       184 PE~~~~~~~~~~~DiwslG~il~elltg~~pf~~~~~~~---~~~~i~~~-~~---~~p~~~~----~~~~~li~~~L~~  252 (329)
T PTZ00263        184 PEVIQSKGHGKAVDWWTMGVLLYEFIAGYPPFFDDTPFR---IYEKILAG-RL---KFPNWFD----GRARDLVKGLLQT  252 (329)
T ss_pred             HHHHcCCCCCCcceeechHHHHHHHHcCCCCCCCCCHHH---HHHHHhcC-Cc---CCCCCCC----HHHHHHHHHHhhc
Confidence            999998889999999999999999999999985432211   11111110 00   0011111    2466899999999


Q ss_pred             CCCCCCC-----hHHHHHH
Q 041793          164 HPKDRPS-----MPSVILM  177 (224)
Q Consensus       164 dp~~Rps-----~~~v~~~  177 (224)
                      ||.+||+     +++++..
T Consensus       253 dP~~R~~~~~~~~~~ll~h  271 (329)
T PTZ00263        253 DHTKRLGTLKGGVADVKNH  271 (329)
T ss_pred             CHHHcCCCCCCCHHHHhcC
Confidence            9999997     6777643


No 53 
>cd05631 STKc_GRK4 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 4. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK4 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK4 has a limited tissue distribution. It is mainly found i
Probab=99.96  E-value=1.3e-28  Score=197.12  Aligned_cols=159  Identities=26%  Similarity=0.371  Sum_probs=121.0

Q ss_pred             CCCCChHHHHHHHHHHHHHHhhhhcCCCCceEecCCCCCceEECCCCCceEeeecceeecCCCCCCCcccccccccccCC
Q 041793            4 CKILDWPKRFHIICGTARGVMYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDEIEGNTNRVIGTYGYMA   83 (224)
Q Consensus         4 ~~~l~~~~~~~i~~qi~~~l~~Lh~~~~~~i~H~dl~~~nil~~~~~~~kl~df~~~~~~~~~~~~~~~~~~~~~~~y~a   83 (224)
                      ...+++.+++.++.|++.||.|||+.+   |+||||||+||+++.++.++|+|||++.......   ......++..|+|
T Consensus        96 ~~~~~~~~~~~~~~qi~~~l~~lH~~~---iiH~dikp~Nill~~~~~~kl~Dfg~~~~~~~~~---~~~~~~g~~~y~a  169 (285)
T cd05631          96 NPGFDEQRAIFYAAELCCGLEDLQRER---IVYRDLKPENILLDDRGHIRISDLGLAVQIPEGE---TVRGRVGTVGYMA  169 (285)
T ss_pred             CCCCCHHHHHHHHHHHHHHHHHHHhCC---EEeCCCCHHHEEECCCCCEEEeeCCCcEEcCCCC---eecCCCCCCCccC
Confidence            346899999999999999999999999   9999999999999999999999999998753321   1123467889999


Q ss_pred             cccccCCCcccccceEehhHHHHHHHhcccCCCCcCCCcccccc-cccCCCccccCccccCCcCHHHHHHHHHHHHHhcc
Q 041793           84 PEYASDGKFSVKSDVFSFGILLLEIISGKKNRGFYHSDNKLNLI-GHVSMPSQLIDPCIQGSFNLVEVIRCIHIGLLCVQ  162 (224)
Q Consensus        84 PE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~  162 (224)
                      ||.+.+..++.++|||||||++|+|++|+.||...........+ ........    ......+    ..+.+|+.+||+
T Consensus       170 PE~~~~~~~~~~~DvwslGvil~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~----~~~~~~s----~~~~~li~~~l~  241 (285)
T cd05631         170 PEVINNEKYTFSPDWWGLGCLIYEMIQGQSPFRKRKERVKREEVDRRVKEDQE----EYSEKFS----EDAKSICRMLLT  241 (285)
T ss_pred             HhhhcCCCCCcccCchhHHHHHHHHHhCCCCCCCCCcchhHHHHHHHhhcccc----cCCccCC----HHHHHHHHHHhh
Confidence            99999989999999999999999999999998754332111111 11110000    0111111    346688999999


Q ss_pred             CCCCCCCC-----hHHHHH
Q 041793          163 QHPKDRPS-----MPSVIL  176 (224)
Q Consensus       163 ~dp~~Rps-----~~~v~~  176 (224)
                      .||++||+     ++++++
T Consensus       242 ~~P~~R~~~~~~~~~~~~~  260 (285)
T cd05631         242 KNPKERLGCRGNGAAGVKQ  260 (285)
T ss_pred             cCHHHhcCCCCCCHHHHhc
Confidence            99999997     677765


No 54 
>cd05032 PTKc_InsR_like Catalytic domain of Insulin Receptor-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Insulin Receptor (InsR) subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). The InsR subfamily is composed of InsR, Insulin-like Growth Factor-1 Receptor (IGF-1R), and similar proteins. PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. InsR and IGF-1R are receptor tyr kinases (RTKs) composed of two alphabeta heterodimers. Binding of the ligand (insulin, IGF-1, or IGF-2) to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, stimulating downstream kinase activities, which initiate signaling cascades and biological 
Probab=99.96  E-value=9.8e-29  Score=196.53  Aligned_cols=162  Identities=27%  Similarity=0.428  Sum_probs=123.6

Q ss_pred             CCCChHHHHHHHHHHHHHHhhhhcCCCCceEecCCCCCceEECCCCCceEeeecceeecCCCCCCCcccccccccccCCc
Q 041793            5 KILDWPKRFHIICGTARGVMYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDEIEGNTNRVIGTYGYMAP   84 (224)
Q Consensus         5 ~~l~~~~~~~i~~qi~~~l~~Lh~~~~~~i~H~dl~~~nil~~~~~~~kl~df~~~~~~~~~~~~~~~~~~~~~~~y~aP   84 (224)
                      ..+++..++.++.||+.||.|||+.+   ++|+||+|+||+++.++.++|+|||++................++..|+||
T Consensus       114 ~~~~~~~~~~~~~~i~~~l~~lH~~~---i~H~di~p~nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~aP  190 (277)
T cd05032         114 GPPTLQKFIQMAAEIADGMAYLAAKK---FVHRDLAARNCMVAEDLTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMAP  190 (277)
T ss_pred             CCCCHHHHHHHHHHHHHHHHHHHhCC---ccccccChheEEEcCCCCEEECCcccchhhccCcccccCCCCCccccccCH
Confidence            45788999999999999999999999   999999999999999999999999998765433221112223456789999


Q ss_pred             ccccCCCcccccceEehhHHHHHHHh-cccCCCCcCCCcccccccccCCCccccCccccCCcCHHHHHHHHHHHHHhccC
Q 041793           85 EYASDGKFSVKSDVFSFGILLLEIIS-GKKNRGFYHSDNKLNLIGHVSMPSQLIDPCIQGSFNLVEVIRCIHIGLLCVQQ  163 (224)
Q Consensus        85 E~~~~~~~~~~~Di~slG~il~~l~~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~  163 (224)
                      |.+.+..++.++|+||||+++|++++ |..||................   ..   ..+...    ...+.+++.+||+.
T Consensus       191 E~~~~~~~~~~~Di~slG~il~el~t~g~~p~~~~~~~~~~~~~~~~~---~~---~~~~~~----~~~~~~li~~~l~~  260 (277)
T cd05032         191 ESLKDGVFTTKSDVWSFGVVLWEMATLAEQPYQGLSNEEVLKFVIDGG---HL---DLPENC----PDKLLELMRMCWQY  260 (277)
T ss_pred             HHHhcCCCCcccchHHHHHHHHHhhccCCCCCccCCHHHHHHHHhcCC---CC---CCCCCC----CHHHHHHHHHHcCC
Confidence            99988889999999999999999998 888875433322222221111   00   011111    23567899999999


Q ss_pred             CCCCCCChHHHHHHhc
Q 041793          164 HPKDRPSMPSVILMLG  179 (224)
Q Consensus       164 dp~~Rps~~~v~~~L~  179 (224)
                      +|++|||+.++++.|+
T Consensus       261 ~p~~Rpt~~~l~~~l~  276 (277)
T cd05032         261 NPKMRPTFLEIVSSLK  276 (277)
T ss_pred             ChhhCCCHHHHHHHhc
Confidence            9999999999999886


No 55 
>cd05052 PTKc_Abl Catalytic domain of the Protein Tyrosine Kinase, Abelson kinase. Protein Tyrosine Kinase (PTK) family; Abelson (Abl) kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Abl (or c-Abl) is a ubiquitously-expressed cytoplasmic (or nonreceptor) tyr kinase that contains SH3, SH2, and tyr kinase domains in its N-terminal region, as well as nuclear localization motifs, a putative DNA-binding domain, and F- and G-actin binding domains in its C-terminal tail. It also contains a short autoinhibitory cap region in its N-terminus. Abl is normally inactive and requires phosphorylation and myristoylation for activation. Abl function depends on its subcellular localization. In the cytoplasm, Abl plays
Probab=99.96  E-value=1.5e-28  Score=194.36  Aligned_cols=164  Identities=26%  Similarity=0.354  Sum_probs=123.9

Q ss_pred             CCCCChHHHHHHHHHHHHHHhhhhcCCCCceEecCCCCCceEECCCCCceEeeecceeecCCCCCCCcccccccccccCC
Q 041793            4 CKILDWPKRFHIICGTARGVMYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDEIEGNTNRVIGTYGYMA   83 (224)
Q Consensus         4 ~~~l~~~~~~~i~~qi~~~l~~Lh~~~~~~i~H~dl~~~nil~~~~~~~kl~df~~~~~~~~~~~~~~~~~~~~~~~y~a   83 (224)
                      ...+++..++.++.|++.||+|||++|   ++|+||+|+||+++.++.++++|||++.......... ......+..|++
T Consensus        98 ~~~l~~~~~~~~~~ql~~~l~~lH~~~---i~H~dlkp~nil~~~~~~~kl~df~~~~~~~~~~~~~-~~~~~~~~~y~a  173 (263)
T cd05052          98 RQEVNAVVLLYMATQISSAMEYLEKKN---FIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTA-HAGAKFPIKWTA  173 (263)
T ss_pred             CCCCCHHHHHHHHHHHHHHHHHHHhCC---EeecccCcceEEEcCCCcEEeCCCccccccccceeec-cCCCCCccccCC
Confidence            346899999999999999999999999   9999999999999999999999999998764332111 111223457999


Q ss_pred             cccccCCCcccccceEehhHHHHHHHh-cccCCCCcCCCcccccccccCCCccccCccccCCcCHHHHHHHHHHHHHhcc
Q 041793           84 PEYASDGKFSVKSDVFSFGILLLEIIS-GKKNRGFYHSDNKLNLIGHVSMPSQLIDPCIQGSFNLVEVIRCIHIGLLCVQ  162 (224)
Q Consensus        84 PE~~~~~~~~~~~Di~slG~il~~l~~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~  162 (224)
                      ||.+.+..++.++|+||||+++|+|++ |..||................ ..     ......+    ..+.+++.+||+
T Consensus       174 PE~~~~~~~~~~~Dv~slG~il~el~t~g~~p~~~~~~~~~~~~~~~~~-~~-----~~~~~~~----~~~~~li~~cl~  243 (263)
T cd05052         174 PESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEKGY-RM-----ERPEGCP----PKVYELMRACWQ  243 (263)
T ss_pred             HHHhccCCCCchhHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHHCCC-CC-----CCCCCCC----HHHHHHHHHHcc
Confidence            999988889999999999999999998 888876433222211111111 00     1111111    346778999999


Q ss_pred             CCCCCCCChHHHHHHhccC
Q 041793          163 QHPKDRPSMPSVILMLGSE  181 (224)
Q Consensus       163 ~dp~~Rps~~~v~~~L~~~  181 (224)
                      .||++||++.++++.|+..
T Consensus       244 ~~p~~Rp~~~~l~~~l~~~  262 (263)
T cd05052         244 WNPSDRPSFAEIHQAFETM  262 (263)
T ss_pred             CCcccCCCHHHHHHHHHhh
Confidence            9999999999999998753


No 56 
>cd05571 STKc_PKB Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B. Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. It is activated downstream of PI3K and plays important roles in diverse cellular functions including cell survival, growth, proliferation, angiogenesis, motility, and migration. PKB also has a central role in a variety of human cancers, having be
Probab=99.96  E-value=6.7e-29  Score=202.18  Aligned_cols=157  Identities=21%  Similarity=0.312  Sum_probs=120.7

Q ss_pred             CCCCChHHHHHHHHHHHHHHhhhhcCCCCceEecCCCCCceEECCCCCceEeeecceeecCCCCCCCcccccccccccCC
Q 041793            4 CKILDWPKRFHIICGTARGVMYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDEIEGNTNRVIGTYGYMA   83 (224)
Q Consensus         4 ~~~l~~~~~~~i~~qi~~~l~~Lh~~~~~~i~H~dl~~~nil~~~~~~~kl~df~~~~~~~~~~~~~~~~~~~~~~~y~a   83 (224)
                      .+.+++.++..++.||+.||+|||+.|   |+||||||+||+++.++.++|+|||++.......  .......|+..|+|
T Consensus        89 ~~~~~~~~~~~~~~qi~~~L~~lH~~~---ivHrDlkp~NIll~~~~~~kl~DfG~a~~~~~~~--~~~~~~~gt~~y~a  163 (323)
T cd05571          89 ERVFSEDRARFYGAEIVSALGYLHSCD---VVYRDLKLENLMLDKDGHIKITDFGLCKEGISDG--ATMKTFCGTPEYLA  163 (323)
T ss_pred             cCCCCHHHHHHHHHHHHHHHHHHHhCC---eEeCCCCHHHEEECCCCCEEEeeCCCCcccccCC--CcccceecCccccC
Confidence            467899999999999999999999999   9999999999999999999999999987532211  11223467899999


Q ss_pred             cccccCCCcccccceEehhHHHHHHHhcccCCCCcCCCcccccccccCCCccccCccccCCcCHHHHHHHHHHHHHhccC
Q 041793           84 PEYASDGKFSVKSDVFSFGILLLEIISGKKNRGFYHSDNKLNLIGHVSMPSQLIDPCIQGSFNLVEVIRCIHIGLLCVQQ  163 (224)
Q Consensus        84 PE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~  163 (224)
                      ||.+.+..++.++|+|||||++|+|++|..||........   ...+.....    ..+...    ...+.+++.+||+.
T Consensus       164 PE~~~~~~~~~~~DiwSlG~il~elltg~~Pf~~~~~~~~---~~~~~~~~~----~~p~~~----~~~~~~li~~~L~~  232 (323)
T cd05571         164 PEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHEKL---FELILMEEI----RFPRTL----SPEAKSLLAGLLKK  232 (323)
T ss_pred             hhhhcCCCCCccccCcccchhhhhhhcCCCCCCCCCHHHH---HHHHHcCCC----CCCCCC----CHHHHHHHHHHccC
Confidence            9999988899999999999999999999999854322211   111111010    011111    13466888999999


Q ss_pred             CCCCCC-----ChHHHHH
Q 041793          164 HPKDRP-----SMPSVIL  176 (224)
Q Consensus       164 dp~~Rp-----s~~~v~~  176 (224)
                      ||++||     ++.++++
T Consensus       233 dP~~R~~~~~~~~~~ll~  250 (323)
T cd05571         233 DPKQRLGGGPEDAKEIME  250 (323)
T ss_pred             CHHHcCCCCCCCHHHHHc
Confidence            999999     7888875


No 57 
>KOG0671 consensus LAMMER dual specificity kinases [Signal transduction mechanisms]
Probab=99.96  E-value=2.8e-29  Score=198.48  Aligned_cols=168  Identities=22%  Similarity=0.291  Sum_probs=131.1

Q ss_pred             CCCCCCChHHHHHHHHHHHHHHhhhhcCCCCceEecCCCCCceEECC--------------------CCCceEeeeccee
Q 041793            2 ERCKILDWPKRFHIICGTARGVMYLHQDSRLRIIHRDLKASNVLLDQ--------------------DMNPKISDFGLAR   61 (224)
Q Consensus         2 ~~~~~l~~~~~~~i~~qi~~~l~~Lh~~~~~~i~H~dl~~~nil~~~--------------------~~~~kl~df~~~~   61 (224)
                      +.-.+++..++..|+.|++.+++|||+.+   ++|.||||+||++..                    +..+++.|||.++
T Consensus       184 N~y~~fpi~~ir~m~~QL~~sv~fLh~~k---l~HTDLKPENILfvss~~~~~~~~k~~~~~~r~~ks~~I~vIDFGsAt  260 (415)
T KOG0671|consen  184 NNYIPFPIDHIRHMGYQLLESVAFLHDLK---LTHTDLKPENILFVSSEYFKTYNPKKKVCFIRPLKSTAIKVIDFGSAT  260 (415)
T ss_pred             CCccccchHHHHHHHHHHHHHHHHHHhcc---eeecCCChheEEEeccceEEEeccCCccceeccCCCcceEEEecCCcc
Confidence            35567899999999999999999999999   999999999999831                    3447999999998


Q ss_pred             ecCCCCCCCcccccccccccCCcccccCCCcccccceEehhHHHHHHHhcccCCCCcCCCcccccccccCC--Ccccc--
Q 041793           62 AFGGDEIEGNTNRVIGTYGYMAPEYASDGKFSVKSDVFSFGILLLEIISGKKNRGFYHSDNKLNLIGHVSM--PSQLI--  137 (224)
Q Consensus        62 ~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~--~~~~~--  137 (224)
                      .-...     ....+.|.+|+|||++.+.+|+..+||||+|||+.|+++|...|+..+..+...+++.+.-  +..+.  
T Consensus       261 f~~e~-----hs~iVsTRHYRAPEViLgLGwS~pCDvWSiGCIL~ElytG~~LFqtHen~EHLaMMerIlGp~P~~mi~r  335 (415)
T KOG0671|consen  261 FDHEH-----HSTIVSTRHYRAPEVILGLGWSQPCDVWSIGCILVELYTGETLFQTHENLEHLAMMERILGPIPSRMIKK  335 (415)
T ss_pred             eeccC-----cceeeeccccCCchheeccCcCCccCceeeeeEEEEeeccceecccCCcHHHHHHHHHhhCCCcHHHhhh
Confidence            74332     2456788999999999999999999999999999999999999988775554444433321  11110  


Q ss_pred             ---------------------------Ccc----ccCCcCHHHHHHHHHHHHHhccCCCCCCCChHHHHHH
Q 041793          138 ---------------------------DPC----IQGSFNLVEVIRCIHIGLLCVQQHPKDRPSMPSVILM  177 (224)
Q Consensus       138 ---------------------------~~~----~~~~~~~~~~~~~~~li~~cl~~dp~~Rps~~~v~~~  177 (224)
                                                 +.+    .....+..+...+++|+.+||.+||.+|+|+.|++..
T Consensus       336 ~~~~Kyf~~~rldw~e~~~~~~~k~v~~~ckpl~~~~~~~d~e~~~LfDLl~~mL~fDP~~RiTl~EAL~H  406 (415)
T KOG0671|consen  336 TRKEKYFRRGRLDWPEVSSKGKSKYVFEPCKPLKKYMLQDDLEHVQLFDLLRRMLEFDPARRITLREALSH  406 (415)
T ss_pred             hhhHhhhhcccccCccccccccchhhhcCCccHHHHhccCcHHHhHHHHHHHHHHccCccccccHHHHhcC
Confidence                                       000    0112244556789999999999999999999999763


No 58 
>cd07859 STKc_TDY_MAPK_plant Catalytic domain of the Serine/Threonine Kinases, TDY Mitogen-Activated Protein Kinases from Plants. Serine/Threonine Kinases (STKs), Plant TDY Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TDY MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. In plants, MAPKs are associated with physiological, developmental, hormonal, and stress responses. Some plants show numerous gene duplications of MAPKs. Arabidopsis thaliana harbors at least 20 MAPKs, named AtMPK1-20. Oryza sativa contains at least 17 MAPKs. There are two subtypes of plant MAPKs based on the conserved phos
Probab=99.96  E-value=5.9e-29  Score=203.31  Aligned_cols=170  Identities=26%  Similarity=0.336  Sum_probs=120.2

Q ss_pred             CCCCChHHHHHHHHHHHHHHhhhhcCCCCceEecCCCCCceEECCCCCceEeeecceeecCCCCCC-CcccccccccccC
Q 041793            4 CKILDWPKRFHIICGTARGVMYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDEIE-GNTNRVIGTYGYM   82 (224)
Q Consensus         4 ~~~l~~~~~~~i~~qi~~~l~~Lh~~~~~~i~H~dl~~~nil~~~~~~~kl~df~~~~~~~~~~~~-~~~~~~~~~~~y~   82 (224)
                      ...+++..+..++.||+.||.|||+.|   |+||||||+||+++.++.+||+|||++......... .......++..|+
T Consensus        97 ~~~~~~~~~~~i~~qi~~aL~~LH~~~---ivH~dlkp~NIll~~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~~t~~y~  173 (338)
T cd07859          97 NDDLTPEHHQFFLYQLLRALKYIHTAN---VFHRDLKPKNILANADCKLKICDFGLARVAFNDTPTAIFWTDYVATRWYR  173 (338)
T ss_pred             cccCCHHHHHHHHHHHHHHHHHHHHCC---eecCCCCHHHeEECCCCcEEEccCccccccccccCccccccCCCCCCCcC
Confidence            456899999999999999999999999   999999999999999999999999998754322111 1112346788999


Q ss_pred             CcccccC--CCcccccceEehhHHHHHHHhcccCCCCcCCCccccccccc-CCCc-----------------cc---cCc
Q 041793           83 APEYASD--GKFSVKSDVFSFGILLLEIISGKKNRGFYHSDNKLNLIGHV-SMPS-----------------QL---IDP  139 (224)
Q Consensus        83 aPE~~~~--~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~-~~~~-----------------~~---~~~  139 (224)
                      |||++.+  ..++.++|||||||++|+|++|+.||...........+... ..+.                 ..   ...
T Consensus       174 aPE~~~~~~~~~~~~~DvwSlGvvl~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~  253 (338)
T cd07859         174 APELCGSFFSKYTPAIDIWSIGCIFAEVLTGKPLFPGKNVVHQLDLITDLLGTPSPETISRVRNEKARRYLSSMRKKQPV  253 (338)
T ss_pred             CHHHHhccccccCchhHHHHHHHHHHHHHcCCCCCCCCChHHHHHHHHHHhCCCCHHHHHHhhhhhHHHHHHhhcccCCC
Confidence            9999865  56789999999999999999999998653321111100000 0000                 00   000


Q ss_pred             cccCCcCHHHHHHHHHHHHHhccCCCCCCCChHHHHHH
Q 041793          140 CIQGSFNLVEVIRCIHIGLLCVQQHPKDRPSMPSVILM  177 (224)
Q Consensus       140 ~~~~~~~~~~~~~~~~li~~cl~~dp~~Rps~~~v~~~  177 (224)
                      ....... .....+.+++.+||+.||++|||++++++.
T Consensus       254 ~~~~~~~-~~~~~~~~li~~~l~~~P~~Rpt~~e~l~h  290 (338)
T cd07859         254 PFSQKFP-NADPLALRLLERLLAFDPKDRPTAEEALAD  290 (338)
T ss_pred             chHHhcC-CCChHHHHHHHHHcCcCcccCCCHHHHhcC
Confidence            0000000 001245689999999999999999999764


No 59 
>cd05603 STKc_SGK2 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 2. Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3. SGK2 shows a more restricted distribution that SGK1 and is most abundantly expressed in epithelial tissues including kidney, liver, pancreas, and the choroid plexus of the brain. In vitro cellular assays show that SGK2 can stimulate the activity of ion channels, the glutamate transporter EEAT4, and the glutamate receptors, GluR6 and GLUR1.
Probab=99.96  E-value=2e-28  Score=199.21  Aligned_cols=153  Identities=22%  Similarity=0.295  Sum_probs=116.5

Q ss_pred             CCCCChHHHHHHHHHHHHHHhhhhcCCCCceEecCCCCCceEECCCCCceEeeecceeecCCCCCCCcccccccccccCC
Q 041793            4 CKILDWPKRFHIICGTARGVMYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDEIEGNTNRVIGTYGYMA   83 (224)
Q Consensus         4 ~~~l~~~~~~~i~~qi~~~l~~Lh~~~~~~i~H~dl~~~nil~~~~~~~kl~df~~~~~~~~~~~~~~~~~~~~~~~y~a   83 (224)
                      .+.+++.++..++.||+.||.|||+.|   |+||||||+||+++.++.+||+|||++.......  .......++..|+|
T Consensus        90 ~~~~~~~~~~~~~~qi~~~L~~lH~~~---ivH~Dlkp~NIll~~~~~~kl~Dfg~~~~~~~~~--~~~~~~~gt~~y~a  164 (321)
T cd05603          90 ERCFLEPRARFYAAEVASAIGYLHSLN---IIYRDLKPENILLDSQGHVVLTDFGLCKEGVEPE--ETTSTFCGTPEYLA  164 (321)
T ss_pred             cCCCCHHHHHHHHHHHHHHHHHHHHCC---eEeccCCHHHeEECCCCCEEEccCCCCccCCCCC--CccccccCCcccCC
Confidence            456889999999999999999999999   9999999999999999999999999987532211  11223467889999


Q ss_pred             cccccCCCcccccceEehhHHHHHHHhcccCCCCcCCCcccccccccCCCccccCccccCCcCHHHHHHHHHHHHHhccC
Q 041793           84 PEYASDGKFSVKSDVFSFGILLLEIISGKKNRGFYHSDNKLNLIGHVSMPSQLIDPCIQGSFNLVEVIRCIHIGLLCVQQ  163 (224)
Q Consensus        84 PE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~  163 (224)
                      ||.+.+..++.++|+|||||++|+|++|..||.......   ....+.....    ..+...    ...+.+++.+||+.
T Consensus       165 PE~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~---~~~~i~~~~~----~~~~~~----~~~~~~li~~~l~~  233 (321)
T cd05603         165 PEVLRKEPYDRTVDWWCLGAVLYEMLYGLPPFYSRDVSQ---MYDNILHKPL----QLPGGK----TVAACDLLVGLLHK  233 (321)
T ss_pred             HHHhcCCCCCCcCcccccchhhhhhhcCCCCCCCCCHHH---HHHHHhcCCC----CCCCCC----CHHHHHHHHHHccC
Confidence            999988889999999999999999999999985433211   1111111000    011111    23467889999999


Q ss_pred             CCCCCCChH
Q 041793          164 HPKDRPSMP  172 (224)
Q Consensus       164 dp~~Rps~~  172 (224)
                      ||.+||++.
T Consensus       234 ~p~~R~~~~  242 (321)
T cd05603         234 DQRRRLGAK  242 (321)
T ss_pred             CHhhcCCCC
Confidence            999999764


No 60 
>PF07714 Pkinase_Tyr:  Protein tyrosine kinase Protein kinase; unclassified specificity. Tyrosine kinase, catalytic domain;  InterPro: IPR001245 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []:   Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins)   Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. Tyrosine-protein kinases can transfer a phosphate group from ATP to a tyrosine residue in a protein. These enzymes can be divided into two main groups []:   Receptor tyrosine kinases (RTK), which are transmembrane proteins involved in signal transduction; they play key roles in growth, differentiation, metabolism, adhesion, motility, death and oncogenesis []. RTKs are composed of 3 domains: an extracellular domain (binds ligand), a transmembrane (TM) domain, and an intracellular catalytic domain (phosphorylates substrate). The TM domain plays an important role in the dimerisation process necessary for signal transduction [].      Cytoplasmic / non-receptor tyrosine kinases, which act as regulatory proteins, playing key roles in cell differentiation, motility, proliferation, and survival. For example, the Src-family of protein-tyrosine kinases [].  ; GO: 0004672 protein kinase activity, 0006468 protein phosphorylation; PDB: 2HYY_C 1OPL_A 2V7A_A 2G2H_B 2G1T_A 3PYY_A 3CS9_D 2HZI_A 2E2B_A 2HIW_A ....
Probab=99.95  E-value=2.3e-29  Score=198.75  Aligned_cols=162  Identities=31%  Similarity=0.484  Sum_probs=118.9

Q ss_pred             CCCCChHHHHHHHHHHHHHHhhhhcCCCCceEecCCCCCceEECCCCCceEeeecceeecCCCCCCCcccccccccccCC
Q 041793            4 CKILDWPKRFHIICGTARGVMYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDEIEGNTNRVIGTYGYMA   83 (224)
Q Consensus         4 ~~~l~~~~~~~i~~qi~~~l~~Lh~~~~~~i~H~dl~~~nil~~~~~~~kl~df~~~~~~~~~~~~~~~~~~~~~~~y~a   83 (224)
                      ...+++.+++.++.||+.||.|||+++   ++|++|+++||+++.++.+||+|||++....................|+|
T Consensus        97 ~~~~~~~~~~~i~~~i~~~l~~Lh~~~---iiH~~l~~~nill~~~~~~Kl~~f~~~~~~~~~~~~~~~~~~~~~~~~~a  173 (259)
T PF07714_consen   97 KEPLSEQQRLSIAIQIAEALSYLHSNN---IIHGNLSPSNILLDSNGQVKLSDFGLSRPISEKSKYKNDSSQQLPLRYLA  173 (259)
T ss_dssp             TTTSBHHHHHHHHHHHHHHHHHHHHTT---EEEST-SGGGEEEETTTEEEEESTTTGEETTTSSSEEESTTSESGGGGS-
T ss_pred             ccccccccccccccccccccccccccc---cccccccccccccccccccccccccccccccccccccccccccccccccc
Confidence            467899999999999999999999999   99999999999999999999999999987632222111222345678999


Q ss_pred             cccccCCCcccccceEehhHHHHHHHh-cccCCCCcCCCcccccccccCCCccccCccccCCcCHHHHHHHHHHHHHhcc
Q 041793           84 PEYASDGKFSVKSDVFSFGILLLEIIS-GKKNRGFYHSDNKLNLIGHVSMPSQLIDPCIQGSFNLVEVIRCIHIGLLCVQ  162 (224)
Q Consensus        84 PE~~~~~~~~~~~Di~slG~il~~l~~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~  162 (224)
                      ||.+.+..++.++||||||+++||+++ |+.||......+....+   ........   ....+    ..+.+++.+||.
T Consensus       174 PE~~~~~~~~~ksDVysfG~~l~ei~~~~~~p~~~~~~~~~~~~~---~~~~~~~~---~~~~~----~~~~~li~~C~~  243 (259)
T PF07714_consen  174 PEVLKDGEYTKKSDVYSFGMLLYEILTLGKFPFSDYDNEEIIEKL---KQGQRLPI---PDNCP----KDIYSLIQQCWS  243 (259)
T ss_dssp             HHHHHHSEESHHHHHHHHHHHHHHHHTTSSGTTTTSCHHHHHHHH---HTTEETTS---BTTSB----HHHHHHHHHHT-
T ss_pred             ccccccccccccccccccccccccccccccccccccccccccccc---ccccccee---ccchh----HHHHHHHHHHcC
Confidence            999988889999999999999999999 67887554333222222   11111111   11111    346688999999


Q ss_pred             CCCCCCCChHHHHHHh
Q 041793          163 QHPKDRPSMPSVILML  178 (224)
Q Consensus       163 ~dp~~Rps~~~v~~~L  178 (224)
                      .||++||++.+|++.|
T Consensus       244 ~~p~~RPs~~~i~~~L  259 (259)
T PF07714_consen  244 HDPEKRPSFQEILQEL  259 (259)
T ss_dssp             SSGGGS--HHHHHHHH
T ss_pred             CChhhCcCHHHHHhcC
Confidence            9999999999999876


No 61 
>PHA03212 serine/threonine kinase US3; Provisional
Probab=99.95  E-value=7.7e-29  Score=206.57  Aligned_cols=109  Identities=26%  Similarity=0.345  Sum_probs=93.9

Q ss_pred             CCCCChHHHHHHHHHHHHHHhhhhcCCCCceEecCCCCCceEECCCCCceEeeecceeecCCCCCCCcccccccccccCC
Q 041793            4 CKILDWPKRFHIICGTARGVMYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDEIEGNTNRVIGTYGYMA   83 (224)
Q Consensus         4 ~~~l~~~~~~~i~~qi~~~l~~Lh~~~~~~i~H~dl~~~nil~~~~~~~kl~df~~~~~~~~~~~~~~~~~~~~~~~y~a   83 (224)
                      .+.+++.+++.++.||+.||.|||+.|   |+||||||+||+++.++.++|+|||++....... ........|++.|+|
T Consensus       176 ~~~l~~~~~~~i~~qi~~aL~ylH~~~---IvHrDiKP~NIll~~~~~vkL~DFG~a~~~~~~~-~~~~~~~~gt~~y~a  251 (391)
T PHA03212        176 KRNIAICDILAIERSVLRAIQYLHENR---IIHRDIKAENIFINHPGDVCLGDFGAACFPVDIN-ANKYYGWAGTIATNA  251 (391)
T ss_pred             cCCCCHHHHHHHHHHHHHHHHHHHhCC---cccCCCChHhEEEcCCCCEEEEeCCccccccccc-ccccccccCccCCCC
Confidence            457899999999999999999999999   9999999999999999999999999986532211 111223468899999


Q ss_pred             cccccCCCcccccceEehhHHHHHHHhcccCCC
Q 041793           84 PEYASDGKFSVKSDVFSFGILLLEIISGKKNRG  116 (224)
Q Consensus        84 PE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~  116 (224)
                      ||.+.+..++.++|||||||++|+|++|+.||.
T Consensus       252 PE~~~~~~~~~~~DiwSlGvil~elltg~~p~~  284 (391)
T PHA03212        252 PELLARDPYGPAVDIWSAGIVLFEMATCHDSLF  284 (391)
T ss_pred             hhhhcCCCCCcHHHHHHHHHHHHHHHHCCCCcC
Confidence            999988889999999999999999999997763


No 62 
>cd05092 PTKc_TrkA Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase A. Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase A (TrkA); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkA is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkA to its ligand, nerve growth factor (NGF), results in receptor oligomerization and activation of the catalytic domain. TrkA is expressed mainly in neural-crest-derived sensory
Probab=99.95  E-value=1.3e-28  Score=196.40  Aligned_cols=162  Identities=27%  Similarity=0.373  Sum_probs=121.9

Q ss_pred             CCCChHHHHHHHHHHHHHHhhhhcCCCCceEecCCCCCceEECCCCCceEeeecceeecCCCCCCCcccccccccccCCc
Q 041793            5 KILDWPKRFHIICGTARGVMYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDEIEGNTNRVIGTYGYMAP   84 (224)
Q Consensus         5 ~~l~~~~~~~i~~qi~~~l~~Lh~~~~~~i~H~dl~~~nil~~~~~~~kl~df~~~~~~~~~~~~~~~~~~~~~~~y~aP   84 (224)
                      ..+++.+++.++.||+.||+|||+.|   ++|+||+|+||+++.++.++|+|||++................++..|+||
T Consensus       117 ~~l~~~~~~~~~~qi~~al~~LH~~~---i~H~dlkp~nil~~~~~~~kL~dfg~~~~~~~~~~~~~~~~~~~~~~y~aP  193 (280)
T cd05092         117 GQLTLGQMLAIASQIASGMVYLASLH---FVHRDLATRNCLVGQGLVVKIGDFGMSRDIYSTDYYRVGGRTMLPIRWMPP  193 (280)
T ss_pred             cccCHHHHHHHHHHHHHHHHHHHHCC---eecccccHhhEEEcCCCCEEECCCCceeEcCCCceeecCCCccccccccCH
Confidence            46899999999999999999999999   999999999999999999999999998765332211111222345689999


Q ss_pred             ccccCCCcccccceEehhHHHHHHHh-cccCCCCcCCCcccccccccCCCccccCccccCCcCHHHHHHHHHHHHHhccC
Q 041793           85 EYASDGKFSVKSDVFSFGILLLEIIS-GKKNRGFYHSDNKLNLIGHVSMPSQLIDPCIQGSFNLVEVIRCIHIGLLCVQQ  163 (224)
Q Consensus        85 E~~~~~~~~~~~Di~slG~il~~l~~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~  163 (224)
                      |.+.+..++.++|+|||||++|+|++ |..||................   ....   ....+    ..+.+++.+||+.
T Consensus       194 E~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~~~~~~~~~~~~---~~~~---~~~~~----~~~~~li~~cl~~  263 (280)
T cd05092         194 ESILYRKFTTESDIWSFGVVLWEIFTYGKQPWYQLSNTEAIECITQGR---ELER---PRTCP----PEVYAIMQGCWQR  263 (280)
T ss_pred             HHhccCCcCchhhHHHHHHHHHHHHcCCCCCCccCCHHHHHHHHHcCc---cCCC---CCCCC----HHHHHHHHHHccC
Confidence            99988889999999999999999998 888875433222211111111   1000   01111    2366888999999


Q ss_pred             CCCCCCChHHHHHHhc
Q 041793          164 HPKDRPSMPSVILMLG  179 (224)
Q Consensus       164 dp~~Rps~~~v~~~L~  179 (224)
                      ||++||++++|++.|+
T Consensus       264 ~P~~Rp~~~~l~~~l~  279 (280)
T cd05092         264 EPQQRMVIKDIHSRLQ  279 (280)
T ss_pred             ChhhCCCHHHHHHHHh
Confidence            9999999999999885


No 63 
>cd05600 STKc_Sid2p_Dbf2p Catalytic domain of Fungal Sid2p- and Dbf2p-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), ROCK- and NDR-like subfamily, fungal Sid2p- and Dbf2p-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sid2p- and Dbf2p-like group is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This group contains fungal kinases including Schizosaccharomyces pombe Sid2p and Saccharomyces cerevisiae Dbf2p. Group members show similarity to NDR kinases in that they contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Sid2p plays a crucial role in the septum initiation network (SIN) and in the initiation of cytokinesis. 
Probab=99.95  E-value=7.9e-29  Score=202.52  Aligned_cols=163  Identities=21%  Similarity=0.248  Sum_probs=123.6

Q ss_pred             CCCCChHHHHHHHHHHHHHHhhhhcCCCCceEecCCCCCceEECCCCCceEeeecceeecCCCCCCCcccccccccccCC
Q 041793            4 CKILDWPKRFHIICGTARGVMYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDEIEGNTNRVIGTYGYMA   83 (224)
Q Consensus         4 ~~~l~~~~~~~i~~qi~~~l~~Lh~~~~~~i~H~dl~~~nil~~~~~~~kl~df~~~~~~~~~~~~~~~~~~~~~~~y~a   83 (224)
                      .+.+++.++..++.||+.||.|||+.|   |+||||||+||+++.++.++|+|||++.....     ......++..|+|
T Consensus        95 ~~~l~~~~~~~~~~qi~~~l~~lH~~~---ivH~dlkp~Nil~~~~~~~kL~Dfg~a~~~~~-----~~~~~~gt~~y~a  166 (333)
T cd05600          95 LGVLSEDHARFYMAEMFEAVDALHELG---YIHRDLKPENFLIDASGHIKLTDFGLSKGIVT-----YANSVVGSPDYMA  166 (333)
T ss_pred             cCCCCHHHHHHHHHHHHHHHHHHHHCC---ccccCCCHHHEEECCCCCEEEEeCcCCccccc-----ccCCcccCccccC
Confidence            457899999999999999999999999   99999999999999999999999999876432     2233467889999


Q ss_pred             cccccCCCcccccceEehhHHHHHHHhcccCCCCcCCCcccccccccCCCccccCccccCCcCHHHHHHHHHHHHHhccC
Q 041793           84 PEYASDGKFSVKSDVFSFGILLLEIISGKKNRGFYHSDNKLNLIGHVSMPSQLIDPCIQGSFNLVEVIRCIHIGLLCVQQ  163 (224)
Q Consensus        84 PE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~  163 (224)
                      ||.+.+..++.++|+|||||++|+|++|..||...........+.........  +.... ........+.+++.+||..
T Consensus       167 PE~~~~~~~~~~~DvwslG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~~~~--~~~~~-~~~~~s~~~~~li~~~l~~  243 (333)
T cd05600         167 PEVLRGKGYDFTVDYWSLGCMLYEFLCGFPPFSGSTPNETWENLKYWKETLQR--PVYDD-PRFNLSDEAWDLITKLIND  243 (333)
T ss_pred             hhHhcCCCCCCccceecchHHHhhhhhCCCCCCCCCHHHHHHHHHhccccccC--CCCCc-cccccCHHHHHHHHHHhhC
Confidence            99999889999999999999999999999998654433222211111100000  00000 0001123467888999999


Q ss_pred             CCCCCCChHHHHHH
Q 041793          164 HPKDRPSMPSVILM  177 (224)
Q Consensus       164 dp~~Rps~~~v~~~  177 (224)
                      +|++||+++++++.
T Consensus       244 ~~~rr~s~~~ll~h  257 (333)
T cd05600         244 PSRRFGSLEDIKNH  257 (333)
T ss_pred             hhhhcCCHHHHHhC
Confidence            99999999999875


No 64 
>cd05095 PTKc_DDR2 Catalytic domain of the Protein Tyrosine Kinase, Discoidin Domain Receptor 2. Protein Tyrosine Kinase (PTK) family; mammalian Discoidin Domain Receptor 2 (DDR2) and homologs; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR2 is a member of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDR2 binds mostly to fibrillar collagens. More recently, it has been reported to also bind collagen X. DDR2 is widely expressed in many tissues wit
Probab=99.95  E-value=2.3e-28  Score=196.58  Aligned_cols=168  Identities=24%  Similarity=0.360  Sum_probs=121.4

Q ss_pred             CCCChHHHHHHHHHHHHHHhhhhcCCCCceEecCCCCCceEECCCCCceEeeecceeecCCCCCCCcccccccccccCCc
Q 041793            5 KILDWPKRFHIICGTARGVMYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDEIEGNTNRVIGTYGYMAP   84 (224)
Q Consensus         5 ~~l~~~~~~~i~~qi~~~l~~Lh~~~~~~i~H~dl~~~nil~~~~~~~kl~df~~~~~~~~~~~~~~~~~~~~~~~y~aP   84 (224)
                      ..+++.+++.++.||+.||+|||+.|   ++|+||||+||+++.++.++|+|||++..+..............+..|++|
T Consensus       125 ~~~~~~~~~~~~~~i~~al~~lH~~~---i~H~dlkp~Nili~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~p  201 (296)
T cd05095         125 VTISYSTLIFMATQIASGMKYLSSLN---FVHRDLATRNCLVGKNYTIKIADFGMSRNLYSGDYYRIQGRAVLPIRWMSW  201 (296)
T ss_pred             cccCHHHHHHHHHHHHHHHHHHHHCC---eecccCChheEEEcCCCCEEeccCcccccccCCcceeccCcCcCccccCCH
Confidence            45788999999999999999999999   999999999999999999999999998765332211111222335679999


Q ss_pred             ccccCCCcccccceEehhHHHHHHHh--cccCCCCcCCCcccccccccCCC--ccccCccccCCcCHHHHHHHHHHHHHh
Q 041793           85 EYASDGKFSVKSDVFSFGILLLEIIS--GKKNRGFYHSDNKLNLIGHVSMP--SQLIDPCIQGSFNLVEVIRCIHIGLLC  160 (224)
Q Consensus        85 E~~~~~~~~~~~Di~slG~il~~l~~--g~~p~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~li~~c  160 (224)
                      |...++.++.++|+|||||++|+|++  |..||..................  .....+. ....    ...+.+++.+|
T Consensus       202 e~~~~~~~~~~~DiwSlG~~l~el~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~----~~~~~~li~~c  276 (296)
T cd05095         202 ESILLGKFTTASDVWAFGVTLWEILTLCKEQPYSQLSDEQVIENTGEFFRDQGRQVYLPK-PALC----PDSLYKLMLSC  276 (296)
T ss_pred             HHHhcCCccchhhhhHHHHHHHHHHHhCCCCCccccChHHHHHHHHHHHhhccccccCCC-CCCC----CHHHHHHHHHH
Confidence            98888889999999999999999998  66776543322211111000000  0000000 0011    13567899999


Q ss_pred             ccCCCCCCCChHHHHHHhcc
Q 041793          161 VQQHPKDRPSMPSVILMLGS  180 (224)
Q Consensus       161 l~~dp~~Rps~~~v~~~L~~  180 (224)
                      |+.||++||++.+|++.|+.
T Consensus       277 l~~~p~~Rp~~~~i~~~l~~  296 (296)
T cd05095         277 WRRNAKERPSFQEIHATLLE  296 (296)
T ss_pred             cCCCcccCCCHHHHHHHHhC
Confidence            99999999999999999863


No 65 
>KOG4721 consensus Serine/threonine protein kinase, contains leucine zipper domain [Signal transduction mechanisms]
Probab=99.95  E-value=6.7e-29  Score=205.22  Aligned_cols=163  Identities=29%  Similarity=0.429  Sum_probs=129.2

Q ss_pred             CCCCCChHHHHHHHHHHHHHHhhhhcCCCCceEecCCCCCceEECCCCCceEeeecceeecCCCCCCCcccccccccccC
Q 041793            3 RCKILDWPKRFHIICGTARGVMYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDEIEGNTNRVIGTYGYM   82 (224)
Q Consensus         3 ~~~~l~~~~~~~i~~qi~~~l~~Lh~~~~~~i~H~dl~~~nil~~~~~~~kl~df~~~~~~~~~~~~~~~~~~~~~~~y~   82 (224)
                      .++++.-+....+..+|+.|+.|||...   |+|||||..||||..+..+|++|||....+...   .....+.||..|+
T Consensus       205 a~~~itp~llv~Wsk~IA~GM~YLH~hK---IIHRDLKSPNiLIs~~d~VKIsDFGTS~e~~~~---STkMSFaGTVaWM  278 (904)
T KOG4721|consen  205 AGRPITPSLLVDWSKGIAGGMNYLHLHK---IIHRDLKSPNILISYDDVVKISDFGTSKELSDK---STKMSFAGTVAWM  278 (904)
T ss_pred             ccCccCHHHHHHHHHHhhhhhHHHHHhh---HhhhccCCCceEeeccceEEeccccchHhhhhh---hhhhhhhhhHhhh
Confidence            4566777888999999999999999998   999999999999999999999999998876543   2233478999999


Q ss_pred             CcccccCCCcccccceEehhHHHHHHHhcccCCCCcCCCcccccccccCCCccccCccccCCcCHHHHHHHHHHHHHhcc
Q 041793           83 APEYASDGKFSVKSDVFSFGILLLEIISGKKNRGFYHSDNKLNLIGHVSMPSQLIDPCIQGSFNLVEVIRCIHIGLLCVQ  162 (224)
Q Consensus        83 aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~  162 (224)
                      |||++++.+-+.|.||||||+++|||++|..||...+...+.--+........++..+.         .-+.-|+++||+
T Consensus       279 APEvIrnePcsEKVDIwSfGVVLWEmLT~EiPYkdVdssAIIwGVGsNsL~LpvPstcP---------~GfklL~Kqcw~  349 (904)
T KOG4721|consen  279 APEVIRNEPCSEKVDIWSFGVVLWEMLTGEIPYKDVDSSAIIWGVGSNSLHLPVPSTCP---------DGFKLLLKQCWN  349 (904)
T ss_pred             CHHHhhcCCcccccceehhHHHHHHHHhcCCCccccchheeEEeccCCcccccCcccCc---------hHHHHHHHHHHh
Confidence            99999999999999999999999999999999765554433322222222122222222         125567789999


Q ss_pred             CCCCCCCChHHHHHHhcc
Q 041793          163 QHPKDRPSMPSVILMLGS  180 (224)
Q Consensus       163 ~dp~~Rps~~~v~~~L~~  180 (224)
                      ..|-.||||.+|+..|+-
T Consensus       350 sKpRNRPSFrqil~HldI  367 (904)
T KOG4721|consen  350 SKPRNRPSFRQILLHLDI  367 (904)
T ss_pred             cCCCCCccHHHHHHHHhh
Confidence            999999999999998853


No 66 
>cd05101 PTKc_FGFR2 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 2. Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 2 (FGFR2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR2 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to
Probab=99.95  E-value=1.2e-28  Score=198.98  Aligned_cols=167  Identities=27%  Similarity=0.368  Sum_probs=125.3

Q ss_pred             CCCChHHHHHHHHHHHHHHhhhhcCCCCceEecCCCCCceEECCCCCceEeeecceeecCCCCCCCcccccccccccCCc
Q 041793            5 KILDWPKRFHIICGTARGVMYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDEIEGNTNRVIGTYGYMAP   84 (224)
Q Consensus         5 ~~l~~~~~~~i~~qi~~~l~~Lh~~~~~~i~H~dl~~~nil~~~~~~~kl~df~~~~~~~~~~~~~~~~~~~~~~~y~aP   84 (224)
                      ..+++.+++.++.||+.||.|||+.|   ++|+||||+||+++.++.++++|||++................++..|+||
T Consensus       132 ~~~~~~~~~~~~~qi~~al~~LH~~g---ivH~dlkp~Nili~~~~~~kl~D~g~~~~~~~~~~~~~~~~~~~~~~y~aP  208 (304)
T cd05101         132 EQMTFKDLVSCTYQVARGMEYLASQK---CIHRDLAARNVLVTENNVMKIADFGLARDVNNIDYYKKTTNGRLPVKWMAP  208 (304)
T ss_pred             ccccHHHHHHHHHHHHHHHHHHHHCC---eeecccccceEEEcCCCcEEECCCccceecccccccccccCCCCCceeeCc
Confidence            46888999999999999999999999   999999999999999999999999999876433222112222345679999


Q ss_pred             ccccCCCcccccceEehhHHHHHHHh-cccCCCCcCCCcccccccccCCCccccCccccCCcCHHHHHHHHHHHHHhccC
Q 041793           85 EYASDGKFSVKSDVFSFGILLLEIIS-GKKNRGFYHSDNKLNLIGHVSMPSQLIDPCIQGSFNLVEVIRCIHIGLLCVQQ  163 (224)
Q Consensus        85 E~~~~~~~~~~~Di~slG~il~~l~~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~  163 (224)
                      |.+.+..++.++||||||+++|++++ |..||...........+...   .....   ....    ...+.+|+.+||+.
T Consensus       209 E~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~~~~~~~~~~---~~~~~---~~~~----~~~~~~li~~cl~~  278 (304)
T cd05101         209 EALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEELFKLLKEG---HRMDK---PANC----TNELYMMMRDCWHA  278 (304)
T ss_pred             hhhccCCCCchhhHHHHHHHHHHHHcCCCCCcccCCHHHHHHHHHcC---CcCCC---CCCC----CHHHHHHHHHHccc
Confidence            99988889999999999999999998 77776543322221111111   11000   0111    13466789999999


Q ss_pred             CCCCCCChHHHHHHhccCCCC
Q 041793          164 HPKDRPSMPSVILMLGSEIVL  184 (224)
Q Consensus       164 dp~~Rps~~~v~~~L~~~~~~  184 (224)
                      +|++|||+.+|++.|+.....
T Consensus       279 ~p~~Rps~~e~l~~l~~~~~~  299 (304)
T cd05101         279 IPSHRPTFKQLVEDLDRILTL  299 (304)
T ss_pred             ChhhCCCHHHHHHHHHHHHHh
Confidence            999999999999999876543


No 67 
>cd05116 PTKc_Syk Catalytic domain of the Protein Tyrosine Kinase, Spleen tyrosine kinase. Protein Tyrosine Kinase (PTK) family; Spleen tyrosine kinase (Syk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Syk, together with Zap-70, form the Syk subfamily of kinases which are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. Syk was first cloned from the spleen, and its function in hematopoietic cells is well-established. Syk is involved in the signaling downstream of activated receptors (including B-cell and Fc receptors) that contain ITAMs (immunoreceptor tyr activation motifs), leading to processes such as cell proliferatio
Probab=99.95  E-value=1.4e-28  Score=193.94  Aligned_cols=164  Identities=30%  Similarity=0.387  Sum_probs=124.4

Q ss_pred             CCCCChHHHHHHHHHHHHHHhhhhcCCCCceEecCCCCCceEECCCCCceEeeecceeecCCCCCCC-cccccccccccC
Q 041793            4 CKILDWPKRFHIICGTARGVMYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDEIEG-NTNRVIGTYGYM   82 (224)
Q Consensus         4 ~~~l~~~~~~~i~~qi~~~l~~Lh~~~~~~i~H~dl~~~nil~~~~~~~kl~df~~~~~~~~~~~~~-~~~~~~~~~~y~   82 (224)
                      .+.+++..++.++.|++.||+|||+.|   ++|+||+|.||+++.++.++++|||++.......... ......++..|+
T Consensus        89 ~~~~~~~~~~~i~~qi~~al~~lH~~~---i~H~dlkp~nill~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~y~  165 (257)
T cd05116          89 NKHVTEKNITELVHQVSMGMKYLEETN---FVHRDLAARNVLLVTQHYAKISDFGLSKALGADENYYKAKTHGKWPVKWY  165 (257)
T ss_pred             cCCCCHHHHHHHHHHHHHHHHHHHHCC---EeecccchhhEEEcCCCeEEECCCccccccCCCCCeeeecCCCCCCcccc
Confidence            457899999999999999999999999   9999999999999999999999999997654322111 111122346899


Q ss_pred             CcccccCCCcccccceEehhHHHHHHHh-cccCCCCcCCCcccccccccCCCccccCccccCCcCHHHHHHHHHHHHHhc
Q 041793           83 APEYASDGKFSVKSDVFSFGILLLEIIS-GKKNRGFYHSDNKLNLIGHVSMPSQLIDPCIQGSFNLVEVIRCIHIGLLCV  161 (224)
Q Consensus        83 aPE~~~~~~~~~~~Di~slG~il~~l~~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl  161 (224)
                      |||.+.+..++.++|+||||+++|++++ |..||...........+.....    ++  .+...+    ..+.++|.+||
T Consensus       166 aPE~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~~~~~~~~i~~~~~----~~--~~~~~~----~~l~~li~~~~  235 (257)
T cd05116         166 APECMNYYKFSSKSDVWSFGVLMWEAFSYGQKPYKGMKGNEVTQMIESGER----ME--CPQRCP----PEMYDLMKLCW  235 (257)
T ss_pred             CHhHhccCCcCchhHHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHCCCC----CC--CCCCCC----HHHHHHHHHHh
Confidence            9999888888899999999999999998 9999865433222222221111    11  111112    24668999999


Q ss_pred             cCCCCCCCChHHHHHHhcc
Q 041793          162 QQHPKDRPSMPSVILMLGS  180 (224)
Q Consensus       162 ~~dp~~Rps~~~v~~~L~~  180 (224)
                      +.||++||++.+|.+.|+.
T Consensus       236 ~~~p~~Rp~~~~i~~~l~~  254 (257)
T cd05116         236 TYGVDERPGFAVVELRLRN  254 (257)
T ss_pred             ccCchhCcCHHHHHHHHhc
Confidence            9999999999999999975


No 68 
>cd05045 PTKc_RET Catalytic domain of the Protein Tyrosine Kinase, REarranged during Transfection protein. Protein Tyrosine Kinase (PTK) family; RET (REarranged during Transfection) protein; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. RET is a receptor tyr kinase (RTK) containing an extracellular region with four cadherin-like repeats, a calcium-binding site, and a cysteine-rich domain, a transmembrane segment, and an intracellular catalytic domain. It is part of a multisubunit complex that binds glial-derived neurotropic factor (GDNF) family ligands (GFLs) including GDNF, neurturin, artemin, and persephin. GFLs bind RET along with four GPI-anchored coreceptors, bringing two RET molecules together, leadi
Probab=99.95  E-value=1.6e-28  Score=196.82  Aligned_cols=165  Identities=27%  Similarity=0.372  Sum_probs=124.7

Q ss_pred             CCCCChHHHHHHHHHHHHHHhhhhcCCCCceEecCCCCCceEECCCCCceEeeecceeecCCCCCCCcccccccccccCC
Q 041793            4 CKILDWPKRFHIICGTARGVMYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDEIEGNTNRVIGTYGYMA   83 (224)
Q Consensus         4 ~~~l~~~~~~~i~~qi~~~l~~Lh~~~~~~i~H~dl~~~nil~~~~~~~kl~df~~~~~~~~~~~~~~~~~~~~~~~y~a   83 (224)
                      .+.+++.+++.++.|++.||.|||+.+   ++||||+|+||+++.++.++|+|||++................++..|++
T Consensus       121 ~~~l~~~~~~~i~~~i~~~l~~LH~~~---ivH~dikp~nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~a  197 (290)
T cd05045         121 ERALTMGDLISFAWQISRGMQYLAEMK---LVHRDLAARNVLVAEGRKMKISDFGLSRDVYEEDSYVKRSKGRIPVKWMA  197 (290)
T ss_pred             ccccCHHHHHHHHHHHHHHHHHHHHCC---eehhhhhhheEEEcCCCcEEeccccccccccCccchhcccCCCCCccccC
Confidence            356899999999999999999999999   99999999999999999999999999876533221111112234567999


Q ss_pred             cccccCCCcccccceEehhHHHHHHHh-cccCCCCcCCCcccccccccCCCccccCccccCCcCHHHHHHHHHHHHHhcc
Q 041793           84 PEYASDGKFSVKSDVFSFGILLLEIIS-GKKNRGFYHSDNKLNLIGHVSMPSQLIDPCIQGSFNLVEVIRCIHIGLLCVQ  162 (224)
Q Consensus        84 PE~~~~~~~~~~~Di~slG~il~~l~~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~  162 (224)
                      ||.+.+..++.++|+||||+++++|++ |..||................   ..   ......    ...+.+++.+||+
T Consensus       198 pE~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~~~~~~~~~~~~~---~~---~~~~~~----~~~~~~~i~~cl~  267 (290)
T cd05045         198 IESLFDHIYTTQSDVWSFGVLLWEIVTLGGNPYPGIAPERLFNLLKTGY---RM---ERPENC----SEEMYNLMLTCWK  267 (290)
T ss_pred             HHHHccCCcchHhHHHHHHHHHHHHHhcCCCCCCCCCHHHHHHHHhCCC---CC---CCCCCC----CHHHHHHHHHHcc
Confidence            999888888999999999999999998 988875443322222211111   00   001111    1346788999999


Q ss_pred             CCCCCCCChHHHHHHhccC
Q 041793          163 QHPKDRPSMPSVILMLGSE  181 (224)
Q Consensus       163 ~dp~~Rps~~~v~~~L~~~  181 (224)
                      .+|++||++.++++.|++.
T Consensus       268 ~~P~~Rp~~~~i~~~l~~~  286 (290)
T cd05045         268 QEPDKRPTFADISKELEKM  286 (290)
T ss_pred             CCcccCCCHHHHHHHHHHH
Confidence            9999999999999999765


No 69 
>KOG0663 consensus Protein kinase PITSLRE and related kinases [General function prediction only]
Probab=99.95  E-value=3.1e-28  Score=189.85  Aligned_cols=169  Identities=26%  Similarity=0.305  Sum_probs=125.9

Q ss_pred             CCCCCChHHHHHHHHHHHHHHhhhhcCCCCceEecCCCCCceEECCCCCceEeeecceeecCCCCCCCcccccccccccC
Q 041793            3 RCKILDWPKRFHIICGTARGVMYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDEIEGNTNRVIGTYGYM   82 (224)
Q Consensus         3 ~~~~l~~~~~~~i~~qi~~~l~~Lh~~~~~~i~H~dl~~~nil~~~~~~~kl~df~~~~~~~~~~~~~~~~~~~~~~~y~   82 (224)
                      ...+|...++.-+..|++.|++|||++.   |+|||||++|+|+...|.+|++|||+|+.+....  ...+..+-|.+|+
T Consensus       170 m~q~F~~~evK~L~~QlL~glk~lH~~w---ilHRDLK~SNLLm~~~G~lKiaDFGLAR~ygsp~--k~~T~lVVTLWYR  244 (419)
T KOG0663|consen  170 MKQPFLPGEVKTLMLQLLRGLKHLHDNW---ILHRDLKTSNLLLSHKGILKIADFGLAREYGSPL--KPYTPLVVTLWYR  244 (419)
T ss_pred             ccCCCchHHHHHHHHHHHHHHHHHhhce---eEecccchhheeeccCCcEEecccchhhhhcCCc--ccCcceEEEeeec
Confidence            3467889999999999999999999999   9999999999999999999999999999986542  2233345689999


Q ss_pred             CcccccCCC-cccccceEehhHHHHHHHhcccCCCCcCCCcccccc-cccCCCccccCc-------------------cc
Q 041793           83 APEYASDGK-FSVKSDVFSFGILLLEIISGKKNRGFYHSDNKLNLI-GHVSMPSQLIDP-------------------CI  141 (224)
Q Consensus        83 aPE~~~~~~-~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~-~~~~~~~~~~~~-------------------~~  141 (224)
                      |||++.+.. |+.+.||||+|||+.|++.+++.|.+....+....+ .....+.+-..+                   .+
T Consensus       245 aPELLLG~~tyst~iDMWSvGCI~aE~l~~kPlf~G~sE~dQl~~If~llGtPte~iwpg~~~lp~~k~~~f~~~pyn~l  324 (419)
T KOG0663|consen  245 APELLLGAKTYSTAVDMWSVGCIFAELLTQKPLFPGKSEIDQLDKIFKLLGTPSEAIWPGYSELPAVKKMTFSEHPYNNL  324 (419)
T ss_pred             CHHHhcCCcccCcchhhhhHHHHHHHHHhcCCCCCCCchHHHHHHHHHHhCCCccccCCCccccchhhccccCCCCchhh
Confidence            999998765 789999999999999999999988765544333222 111111110000                   00


Q ss_pred             cCCcCHH-HHHHHHHHHHHhccCCCCCCCChHHHHH
Q 041793          142 QGSFNLV-EVIRCIHIGLLCVQQHPKDRPSMPSVIL  176 (224)
Q Consensus       142 ~~~~~~~-~~~~~~~li~~cl~~dp~~Rps~~~v~~  176 (224)
                      ...+... -...-++|+..+|.+||.+|.|+++.++
T Consensus       325 r~kF~~~~lse~g~~Lln~llt~dP~kR~tA~~~L~  360 (419)
T KOG0663|consen  325 RKKFGALSLSEQGFDLLNKLLTYDPGKRITAEDGLK  360 (419)
T ss_pred             hhhccccccchhHHHHHHHHhccCccccccHHHhhc
Confidence            0000000 1134578999999999999999999865


No 70 
>cd05585 STKc_YPK1_like Catalytic domain of Yeast Protein Kinase 1-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Yeast protein kinase 1 (YPK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The YPK1-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of fungal proteins with similarity to the AGC STKs, Saccharomyces cerevisiae YPK1 and Schizosaccharomyces pombe Gad8p. YPK1 is required for cell growth and acts as a downstream kinase in the sphingolipid-mediated signaling pathway of yeast. It also plays a role in efficient endocytosis and in the maintenance of cell wall integrity. Gad8p is a downstream target of Tor1p, the fission yeast homolog of mTOR. It pl
Probab=99.95  E-value=2e-28  Score=198.44  Aligned_cols=160  Identities=21%  Similarity=0.279  Sum_probs=120.1

Q ss_pred             CCCCChHHHHHHHHHHHHHHhhhhcCCCCceEecCCCCCceEECCCCCceEeeecceeecCCCCCCCcccccccccccCC
Q 041793            4 CKILDWPKRFHIICGTARGVMYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDEIEGNTNRVIGTYGYMA   83 (224)
Q Consensus         4 ~~~l~~~~~~~i~~qi~~~l~~Lh~~~~~~i~H~dl~~~nil~~~~~~~kl~df~~~~~~~~~~~~~~~~~~~~~~~y~a   83 (224)
                      .+.+++..+..++.||+.||.|||+.|   |+||||||+||+++.++.++|+|||++.......  .......|+..|+|
T Consensus        87 ~~~~~~~~~~~~~~qi~~~l~~lH~~~---i~HrDlkp~Nili~~~~~~kl~Dfg~~~~~~~~~--~~~~~~~gt~~y~a  161 (312)
T cd05585          87 EGRFDLSRARFYTAELLCALENLHKFN---VIYRDLKPENILLDYQGHIALCDFGLCKLNMKDD--DKTNTFCGTPEYLA  161 (312)
T ss_pred             cCCCCHHHHHHHHHHHHHHHHHHHhCC---eEeCCCCHHHeEECCCCcEEEEECcccccCccCC--CccccccCCcccCC
Confidence            457899999999999999999999999   9999999999999999999999999987532211  11233467889999


Q ss_pred             cccccCCCcccccceEehhHHHHHHHhcccCCCCcCCCcccccccccCCCccccCccccCCcCHHHHHHHHHHHHHhccC
Q 041793           84 PEYASDGKFSVKSDVFSFGILLLEIISGKKNRGFYHSDNKLNLIGHVSMPSQLIDPCIQGSFNLVEVIRCIHIGLLCVQQ  163 (224)
Q Consensus        84 PE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~  163 (224)
                      ||.+.+..++.++|+|||||++|+|++|..||......   ...........    ......+    ..+.+++.+||+.
T Consensus       162 PE~~~~~~~~~~~DvwslGvil~el~tg~~pf~~~~~~---~~~~~~~~~~~----~~~~~~~----~~~~~li~~~L~~  230 (312)
T cd05585         162 PELLLGHGYTKAVDWWTLGVLLYEMLTGLPPFYDENVN---EMYRKILQEPL----RFPDGFD----RDAKDLLIGLLSR  230 (312)
T ss_pred             HHHHcCCCCCCccceechhHHHHHHHhCCCCcCCCCHH---HHHHHHHcCCC----CCCCcCC----HHHHHHHHHHcCC
Confidence            99999988999999999999999999999998643221   11111111000    0111111    2466888999999


Q ss_pred             CCCCCCChHHHHHHhc
Q 041793          164 HPKDRPSMPSVILMLG  179 (224)
Q Consensus       164 dp~~Rps~~~v~~~L~  179 (224)
                      ||++||++..+.+.|.
T Consensus       231 dp~~R~~~~~~~e~l~  246 (312)
T cd05585         231 DPTRRLGYNGAQEIKN  246 (312)
T ss_pred             CHHHcCCCCCHHHHHc
Confidence            9999987655444443


No 71 
>KOG1026 consensus Nerve growth factor receptor TRKA and related tyrosine kinases [Signal transduction mechanisms; Intracellular trafficking, secretion, and vesicular transport]
Probab=99.95  E-value=6.4e-29  Score=213.30  Aligned_cols=167  Identities=29%  Similarity=0.418  Sum_probs=132.9

Q ss_pred             CCCCChHHHHHHHHHHHHHHhhhhcCCCCceEecCCCCCceEECCCCCceEeeecceeecCCCCCCCcccccccccccCC
Q 041793            4 CKILDWPKRFHIICGTARGVMYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDEIEGNTNRVIGTYGYMA   83 (224)
Q Consensus         4 ~~~l~~~~~~~i~~qi~~~l~~Lh~~~~~~i~H~dl~~~nil~~~~~~~kl~df~~~~~~~~~~~~~~~~~~~~~~~y~a   83 (224)
                      ..+|+..+.++|+.|||.|+.||-+..   ++||||...||||..+..+|++|||+++-.-..+.-+......-+++|+|
T Consensus       597 ~~~L~~~q~L~iA~QIAaGM~YLs~~~---FVHRDLATRNCLVge~l~VKIsDfGLsRdiYssDYYk~~~~t~lPIRWMp  673 (774)
T KOG1026|consen  597 PPPLSTSQFLHIATQIAAGMEYLSSHH---FVHRDLATRNCLVGENLVVKISDFGLSRDIYSSDYYKVRGNTLLPIRWMP  673 (774)
T ss_pred             CCCCCHHHHHHHHHHHHHHHHHHHhCc---ccccchhhhhceeccceEEEecccccchhhhhhhhhcccCCceeeeecCC
Confidence            356999999999999999999999998   99999999999999999999999999985432221111111233679999


Q ss_pred             cccccCCCcccccceEehhHHHHHHHh-cccCCCCcCCCcccccccccCCCccccCccccCCcCHHHHHHHHHHHHHhcc
Q 041793           84 PEYASDGKFSVKSDVFSFGILLLEIIS-GKKNRGFYHSDNKLNLIGHVSMPSQLIDPCIQGSFNLVEVIRCIHIGLLCVQ  162 (224)
Q Consensus        84 PE~~~~~~~~~~~Di~slG~il~~l~~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~  162 (224)
                      ||.+..++++.++||||||+++||+++ |+.||.+...++..+.+..... -..++.+.         ..+.+||..||+
T Consensus       674 pEsIly~kFTteSDVWs~GVvLWEIFsyG~QPy~glSn~EVIe~i~~g~l-L~~Pe~CP---------~~vY~LM~~CW~  743 (774)
T KOG1026|consen  674 PESILYGKFTTESDVWSFGVVLWEIFSYGKQPYYGLSNQEVIECIRAGQL-LSCPENCP---------TEVYSLMLECWN  743 (774)
T ss_pred             HHHhhcCcccchhhhhhhhhhhhhhhccccCcccccchHHHHHHHHcCCc-ccCCCCCC---------HHHHHHHHHHhh
Confidence            999999999999999999999999996 7788877777766665554433 12222222         236678899999


Q ss_pred             CCCCCCCChHHHHHHhccCCC
Q 041793          163 QHPKDRPSMPSVILMLGSEIV  183 (224)
Q Consensus       163 ~dp~~Rps~~~v~~~L~~~~~  183 (224)
                      .+|.+||+|+||-.+|+....
T Consensus       744 ~~P~~RPsF~eI~~~L~~~~~  764 (774)
T KOG1026|consen  744 ENPKRRPSFKEIHSRLQAWAQ  764 (774)
T ss_pred             cCcccCCCHHHHHHHHHHHHh
Confidence            999999999999999987643


No 72 
>cd05080 PTKc_Tyk2_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinase, Tyrosine kinase 2. Protein Tyrosine Kinase (PTK) family; Tyrosine kinase 2 (Tyk2); catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyk2 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of sign
Probab=99.95  E-value=1.6e-28  Score=196.14  Aligned_cols=173  Identities=28%  Similarity=0.326  Sum_probs=123.4

Q ss_pred             CCCChHHHHHHHHHHHHHHhhhhcCCCCceEecCCCCCceEECCCCCceEeeecceeecCCCCCCCc-ccccccccccCC
Q 041793            5 KILDWPKRFHIICGTARGVMYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDEIEGN-TNRVIGTYGYMA   83 (224)
Q Consensus         5 ~~l~~~~~~~i~~qi~~~l~~Lh~~~~~~i~H~dl~~~nil~~~~~~~kl~df~~~~~~~~~~~~~~-~~~~~~~~~y~a   83 (224)
                      ..+++.+++.++.|++.||.|||+.+   ++|+||||+||+++.++.++|+|||++........... .....++..|++
T Consensus       102 ~~l~~~~~~~i~~~l~~~l~~lH~~~---i~H~dlkp~Nili~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~  178 (283)
T cd05080         102 HKLNLAQLLLFAQQICEGMAYLHSQH---YIHRDLAARNVLLDNDRLVKIGDFGLAKAVPEGHEYYRVREDGDSPVFWYA  178 (283)
T ss_pred             cCCCHHHHHHHHHHHHHHHHHHHHCC---eeccccChheEEEcCCCcEEEeecccccccCCcchhhccCCCCCCCceeeC
Confidence            46899999999999999999999999   99999999999999999999999999886543221111 111234556999


Q ss_pred             cccccCCCcccccceEehhHHHHHHHhcccCCCCcCCCcccccccccC------CCccccCccccCCcCHHHHHHHHHHH
Q 041793           84 PEYASDGKFSVKSDVFSFGILLLEIISGKKNRGFYHSDNKLNLIGHVS------MPSQLIDPCIQGSFNLVEVIRCIHIG  157 (224)
Q Consensus        84 PE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~li  157 (224)
                      ||.+.+..++.++|+||||+++++|++|..||......-. .......      ......+..............+.+++
T Consensus       179 PE~~~~~~~~~~~Di~slG~~l~el~tg~~p~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li  257 (283)
T cd05080         179 VECLKENKFSYASDVWSFGVTLYELLTHCDSKQSPPKKFE-EMIGPKQGQMTVVRLIELLERGMRLPCPKNCPQEVYILM  257 (283)
T ss_pred             HhHhcccCCCcccccHHHHHHHHHHHhCCCCCCCCcchhh-hhhcccccccchhhhhhhhhcCCCCCCCCCCCHHHHHHH
Confidence            9999888889999999999999999999998754322110 0000000      00000000000000001123577899


Q ss_pred             HHhccCCCCCCCChHHHHHHhccC
Q 041793          158 LLCVQQHPKDRPSMPSVILMLGSE  181 (224)
Q Consensus       158 ~~cl~~dp~~Rps~~~v~~~L~~~  181 (224)
                      .+||+.+|++|||+++|++.|+..
T Consensus       258 ~~cl~~~p~~Rps~~~i~~~l~~~  281 (283)
T cd05080         258 KNCWETEAKFRPTFRSLIPILKEM  281 (283)
T ss_pred             HHHhccChhhCCCHHHHHHHHHHh
Confidence            999999999999999999998764


No 73 
>cd05084 PTKc_Fes Catalytic domain of the Protein Tyrosine Kinase, Fes. Protein Tyrosine Kinase (PTK) family; Fes (or Fps) kinase subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fes subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. The genes for Fes (feline sarcoma) and Fps (Fujinami poultry sarcoma) were first isolated from tumor-causing retroviruses. The viral oncogenes encode chimeric Fes proteins consisting of Gag sequences at the N-termini, resulting in unregulated tyr kinase activity. Fes kinase is expressed in myeloid, vascular 
Probab=99.95  E-value=1.1e-28  Score=193.70  Aligned_cols=163  Identities=28%  Similarity=0.325  Sum_probs=121.4

Q ss_pred             CCCCChHHHHHHHHHHHHHHhhhhcCCCCceEecCCCCCceEECCCCCceEeeecceeecCCCCCCCcccccccccccCC
Q 041793            4 CKILDWPKRFHIICGTARGVMYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDEIEGNTNRVIGTYGYMA   83 (224)
Q Consensus         4 ~~~l~~~~~~~i~~qi~~~l~~Lh~~~~~~i~H~dl~~~nil~~~~~~~kl~df~~~~~~~~~~~~~~~~~~~~~~~y~a   83 (224)
                      ...+++.+++.++.|++.||.|||+.|   ++|+||+|.||+++.++.++|+|||++.................+..|+|
T Consensus        88 ~~~~~~~~~~~~~~qi~~~L~~lH~~~---i~H~dl~p~nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~a  164 (252)
T cd05084          88 GPRLKVKELIQMVENAAAGMEYLESKH---CIHRDLAARNCLVTEKNVLKISDFGMSREEEDGVYASTGGMKQIPVKWTA  164 (252)
T ss_pred             CCCCCHHHHHHHHHHHHHHHHHHHhCC---ccccccchheEEEcCCCcEEECccccCcccccccccccCCCCCCceeecC
Confidence            346899999999999999999999999   99999999999999999999999999875432211111111122456999


Q ss_pred             cccccCCCcccccceEehhHHHHHHHh-cccCCCCcCCCcccccccccCCCccccCccccCCcCHHHHHHHHHHHHHhcc
Q 041793           84 PEYASDGKFSVKSDVFSFGILLLEIIS-GKKNRGFYHSDNKLNLIGHVSMPSQLIDPCIQGSFNLVEVIRCIHIGLLCVQ  162 (224)
Q Consensus        84 PE~~~~~~~~~~~Di~slG~il~~l~~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~  162 (224)
                      ||.+.+..++.++|+||||+++|++++ |..||................ ...     .....    ...+.+++.+||+
T Consensus       165 PE~~~~~~~~~~~Dv~slG~il~e~~~~~~~p~~~~~~~~~~~~~~~~~-~~~-----~~~~~----~~~~~~li~~~l~  234 (252)
T cd05084         165 PEALNYGRYSSESDVWSFGILLWEAFSLGAVPYANLSNQQTREAIEQGV-RLP-----CPELC----PDAVYRLMERCWE  234 (252)
T ss_pred             chhhcCCCCChHHHHHHHHHHHHHHHhCCCCCccccCHHHHHHHHHcCC-CCC-----CcccC----CHHHHHHHHHHcC
Confidence            999988889999999999999999997 888875433222211111110 000     01111    2357789999999


Q ss_pred             CCCCCCCChHHHHHHhc
Q 041793          163 QHPKDRPSMPSVILMLG  179 (224)
Q Consensus       163 ~dp~~Rps~~~v~~~L~  179 (224)
                      .+|++|||+.+|++.|+
T Consensus       235 ~~p~~Rps~~~~~~~l~  251 (252)
T cd05084         235 YDPGQRPSFSTVHQELQ  251 (252)
T ss_pred             CChhhCcCHHHHHHHHh
Confidence            99999999999999885


No 74 
>cd00192 PTKc Catalytic domain of Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family, catalytic domain. This PTKc family is part of a larger superfamily that includes the catalytic domains of protein serine/threonine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. They can be classified into receptor and non-receptor tyr kinases. PTKs play important roles in many cellular processes including, lymphocyte activation, epithelium growth and maintenance, metabolism control, organogenesis regulation, survival, proliferation, differentiation, migration, adhesion, motility, and morphogenesis. Receptor tyr kinases (RTKs) are integral membrane proteins which contain an extracellular ligand-binding region, a transmembrane segment, and an intracellular tyr kinase domain. RTKs are usually activated through ligan
Probab=99.95  E-value=3.3e-28  Score=191.35  Aligned_cols=163  Identities=31%  Similarity=0.437  Sum_probs=125.4

Q ss_pred             CCCCChHHHHHHHHHHHHHHhhhhcCCCCceEecCCCCCceEECCCCCceEeeecceeecCCCCCCCcccccccccccCC
Q 041793            4 CKILDWPKRFHIICGTARGVMYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDEIEGNTNRVIGTYGYMA   83 (224)
Q Consensus         4 ~~~l~~~~~~~i~~qi~~~l~~Lh~~~~~~i~H~dl~~~nil~~~~~~~kl~df~~~~~~~~~~~~~~~~~~~~~~~y~a   83 (224)
                      ...+++.+++.++.|++.||.|||+++   ++|+||+|+||+++.++.++|+|||.+................++..|+|
T Consensus        99 ~~~~~~~~~~~~~~~l~~al~~lH~~~---i~H~di~p~nili~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~y~a  175 (262)
T cd00192          99 KSTLSLKDLLSFAIQIAKGMEYLASKK---FVHRDLAARNCLVGEDLVVKISDFGLSRDVYDDDYYRKKTGGKLPIRWMA  175 (262)
T ss_pred             cccCCHHHHHHHHHHHHHHHHHHHcCC---cccCccCcceEEECCCCcEEEcccccccccccccccccccCCCcCccccC
Confidence            478999999999999999999999999   99999999999999999999999999987654321112223455778999


Q ss_pred             cccccCCCcccccceEehhHHHHHHHh-cccCCCCcCCCcccccccccCCCccccCccccCCcCHHHHHHHHHHHHHhcc
Q 041793           84 PEYASDGKFSVKSDVFSFGILLLEIIS-GKKNRGFYHSDNKLNLIGHVSMPSQLIDPCIQGSFNLVEVIRCIHIGLLCVQ  162 (224)
Q Consensus        84 PE~~~~~~~~~~~Di~slG~il~~l~~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~  162 (224)
                      ||.+.+..++.++|+||||++++++++ |..||..............   .....   .....    ...+.+++.+||+
T Consensus       176 PE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~~~~~~~~~---~~~~~---~~~~~----~~~~~~li~~~l~  245 (262)
T cd00192         176 PESLKDGIFTSKSDVWSFGVLLWEIFTLGATPYPGLSNEEVLEYLRK---GYRLP---KPEYC----PDELYELMLSCWQ  245 (262)
T ss_pred             HHHhccCCcchhhccHHHHHHHHHHHhcCCCCCCCCCHHHHHHHHHc---CCCCC---CCccC----ChHHHHHHHHHcc
Confidence            999988888999999999999999998 5888765432222221111   11100   01111    2357789999999


Q ss_pred             CCCCCCCChHHHHHHhc
Q 041793          163 QHPKDRPSMPSVILMLG  179 (224)
Q Consensus       163 ~dp~~Rps~~~v~~~L~  179 (224)
                      .||++|||+.++++.|+
T Consensus       246 ~~p~~Rps~~~l~~~l~  262 (262)
T cd00192         246 LDPEDRPTFSELVERLE  262 (262)
T ss_pred             CCcccCcCHHHHHHhhC
Confidence            99999999999998874


No 75 
>cd07871 STKc_PCTAIRE3 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-3 kinase. Serine/Threonine Kinases (STKs), PCTAIRE-3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-3 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-3 shows a restricted pattern of expression and is present in brain, kidney, and intestine. It is elevated in Alzheimer's disease (AD) and has been shown to associate with paired helical filament
Probab=99.95  E-value=7.9e-29  Score=198.59  Aligned_cols=168  Identities=23%  Similarity=0.281  Sum_probs=118.8

Q ss_pred             CCCCChHHHHHHHHHHHHHHhhhhcCCCCceEecCCCCCceEECCCCCceEeeecceeecCCCCCCCcccccccccccCC
Q 041793            4 CKILDWPKRFHIICGTARGVMYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDEIEGNTNRVIGTYGYMA   83 (224)
Q Consensus         4 ~~~l~~~~~~~i~~qi~~~l~~Lh~~~~~~i~H~dl~~~nil~~~~~~~kl~df~~~~~~~~~~~~~~~~~~~~~~~y~a   83 (224)
                      ...+++..+..++.||+.||.|||+.|   |+||||||+||+++.++.+||+|||++........  ......++..|+|
T Consensus        97 ~~~~~~~~~~~~~~qi~~aL~~LH~~~---ivH~dlkp~Nil~~~~~~~kl~DfG~~~~~~~~~~--~~~~~~~~~~y~a  171 (288)
T cd07871          97 GNLMSMHNVKIFMFQLLRGLSYCHKRK---ILHRDLKPQNLLINEKGELKLADFGLARAKSVPTK--TYSNEVVTLWYRP  171 (288)
T ss_pred             CCCCCHHHHHHHHHHHHHHHHHHHhCC---cccCCCCHHHEEECCCCCEEECcCcceeeccCCCc--cccCceecccccC
Confidence            345788999999999999999999999   99999999999999999999999999876532211  1222456788999


Q ss_pred             cccccC-CCcccccceEehhHHHHHHHhcccCCCCcCCCcccccccc-cCCC-----------cc---ccCccccCCcC-
Q 041793           84 PEYASD-GKFSVKSDVFSFGILLLEIISGKKNRGFYHSDNKLNLIGH-VSMP-----------SQ---LIDPCIQGSFN-  146 (224)
Q Consensus        84 PE~~~~-~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~-~~~~-----------~~---~~~~~~~~~~~-  146 (224)
                      ||.+.+ ..++.++|+||+||++|+|++|+.||...........+.. ...+           ..   ...+....... 
T Consensus       172 PE~~~~~~~~~~~~DiwslG~~l~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  251 (288)
T cd07871         172 PDVLLGSTEYSTPIDMWGVGCILYEMATGRPMFPGSTVKEELHLIFRLLGTPTEETWPGITSNEEFRSYLFPQYRAQPLI  251 (288)
T ss_pred             hHHhcCCcccCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCChHHhhccccchhhhccccCccCCCchH
Confidence            998865 4578999999999999999999999865332211111100 0000           00   00000000000 


Q ss_pred             ---HHHHHHHHHHHHHhccCCCCCCCChHHHHH
Q 041793          147 ---LVEVIRCIHIGLLCVQQHPKDRPSMPSVIL  176 (224)
Q Consensus       147 ---~~~~~~~~~li~~cl~~dp~~Rps~~~v~~  176 (224)
                         ......+++|+.+||+.||.+|||++++++
T Consensus       252 ~~~~~~~~~~~dll~~mL~~dp~~R~t~~~~l~  284 (288)
T cd07871         252 NHAPRLDTDGIDLLSSLLLYETKSRISAEAALR  284 (288)
T ss_pred             HhCCCCCHHHHHHHHHhcCcCcccCCCHHHHhc
Confidence               000124678999999999999999999974


No 76 
>cd05614 STKc_MSK2_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase 2. Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, MSK2, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, which trigger phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydroph
Probab=99.95  E-value=2e-28  Score=200.00  Aligned_cols=162  Identities=23%  Similarity=0.297  Sum_probs=120.0

Q ss_pred             CCCCChHHHHHHHHHHHHHHhhhhcCCCCceEecCCCCCceEECCCCCceEeeecceeecCCCCCCCcccccccccccCC
Q 041793            4 CKILDWPKRFHIICGTARGVMYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDEIEGNTNRVIGTYGYMA   83 (224)
Q Consensus         4 ~~~l~~~~~~~i~~qi~~~l~~Lh~~~~~~i~H~dl~~~nil~~~~~~~kl~df~~~~~~~~~~~~~~~~~~~~~~~y~a   83 (224)
                      ++.+++.++..++.||+.||.|||+.|   |+||||||+||+++.++.++|+|||++......... ......|+..|+|
T Consensus        99 ~~~~~~~~~~~~~~qi~~~l~~lH~~~---ivHrDlkp~Nili~~~~~~kl~DfG~~~~~~~~~~~-~~~~~~gt~~y~a  174 (332)
T cd05614          99 RDNFSEDEVRFYSGEIILALEHLHKLG---IVYRDIKLENILLDSEGHVVLTDFGLSKEFLSEEKE-RTYSFCGTIEYMA  174 (332)
T ss_pred             cCCCCHHHHHHHHHHHHHHHHHHHHCC---cEecCCCHHHeEECCCCCEEEeeCcCCccccccCCC-ccccccCCccccC
Confidence            467899999999999999999999999   999999999999999999999999998765332211 1223467899999


Q ss_pred             cccccCCC-cccccceEehhHHHHHHHhcccCCCCcCCCcccccc-cccCCCccccCccccCCcCHHHHHHHHHHHHHhc
Q 041793           84 PEYASDGK-FSVKSDVFSFGILLLEIISGKKNRGFYHSDNKLNLI-GHVSMPSQLIDPCIQGSFNLVEVIRCIHIGLLCV  161 (224)
Q Consensus        84 PE~~~~~~-~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl  161 (224)
                      ||.+.+.. ++.++|||||||++|+|++|+.||...........+ ......    ++......+    ..+.+++.+||
T Consensus       175 PE~~~~~~~~~~~~DiwslG~il~elltg~~pf~~~~~~~~~~~~~~~~~~~----~~~~~~~~~----~~~~~li~~~l  246 (332)
T cd05614         175 PEIIRGKGGHGKAVDWWSLGILIFELLTGASPFTLEGERNTQSEVSRRILKC----DPPFPSFIG----PEAQDLLHKLL  246 (332)
T ss_pred             HHHhcCCCCCCCccccccchhhhhhhhcCCCCCCCCCCCCCHHHHHHHHhcC----CCCCCCCCC----HHHHHHHHHHc
Confidence            99987654 688999999999999999999998643322211111 111100    111111111    24567889999


Q ss_pred             cCCCCCCC-----ChHHHHHH
Q 041793          162 QQHPKDRP-----SMPSVILM  177 (224)
Q Consensus       162 ~~dp~~Rp-----s~~~v~~~  177 (224)
                      +.||++||     +++++++.
T Consensus       247 ~~dp~~R~~~~~~~~~~~l~h  267 (332)
T cd05614         247 RKDPKKRLGAGPQGASEIKEH  267 (332)
T ss_pred             CCCHHHcCCCCCCCHHHHHcC
Confidence            99999999     67777653


No 77 
>cd05114 PTKc_Tec_Rlk Catalytic domain of the Protein Tyrosine Kinases, Tyrosine kinase expressed in hepatocellular carcinoma and Resting lymphocyte kinase. Protein Tyrosine Kinase (PTK) family; Tyrosine kinase expressed in hepatocellular carcinoma (Tec) and Resting lymphocyte kinase (Rlk); catalytic (c) domain. The PTKc family is part of a larger superfamily, that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tec and Rlk (also named Txk) are members of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin h
Probab=99.95  E-value=3e-28  Score=191.80  Aligned_cols=161  Identities=27%  Similarity=0.394  Sum_probs=122.2

Q ss_pred             CCCChHHHHHHHHHHHHHHhhhhcCCCCceEecCCCCCceEECCCCCceEeeecceeecCCCCCCCcccccccccccCCc
Q 041793            5 KILDWPKRFHIICGTARGVMYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDEIEGNTNRVIGTYGYMAP   84 (224)
Q Consensus         5 ~~l~~~~~~~i~~qi~~~l~~Lh~~~~~~i~H~dl~~~nil~~~~~~~kl~df~~~~~~~~~~~~~~~~~~~~~~~y~aP   84 (224)
                      ..+++..++.++.|++.||+|||+.|   ++|+||+|+||+++.++.++++|||.+......... ......++..|+||
T Consensus        95 ~~~~~~~~~~~~~~i~~~l~~lH~~~---i~H~dl~p~ni~i~~~~~~kl~d~g~~~~~~~~~~~-~~~~~~~~~~y~aP  170 (256)
T cd05114          95 GKLSKDMLLSMCQDVCEGMEYLERNS---FIHRDLAARNCLVSSTGVVKVSDFGMTRYVLDDEYT-SSSGAKFPVKWSPP  170 (256)
T ss_pred             cCCCHHHHHHHHHHHHHHHHHHHHCC---ccccccCcceEEEcCCCeEEECCCCCccccCCCcee-ccCCCCCchhhCCh
Confidence            46899999999999999999999999   999999999999999999999999998765332211 11112345679999


Q ss_pred             ccccCCCcccccceEehhHHHHHHHh-cccCCCCcCCCcccccccccCCCccccCccccCCcCHHHHHHHHHHHHHhccC
Q 041793           85 EYASDGKFSVKSDVFSFGILLLEIIS-GKKNRGFYHSDNKLNLIGHVSMPSQLIDPCIQGSFNLVEVIRCIHIGLLCVQQ  163 (224)
Q Consensus        85 E~~~~~~~~~~~Di~slG~il~~l~~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~  163 (224)
                      |.+.+..++.++|+||||+++|++++ |+.||...........+...   .....+.   ..    ...+.+++.+||+.
T Consensus       171 E~~~~~~~~~~~Di~s~G~~l~el~~~g~~p~~~~~~~~~~~~i~~~---~~~~~~~---~~----~~~~~~li~~c~~~  240 (256)
T cd05114         171 EVFNFSKYSSKSDVWSFGVLMWEVFTEGKMPFEKKSNYEVVEMISRG---FRLYRPK---LA----SMTVYEVMYSCWHE  240 (256)
T ss_pred             hhcccCccchhhhhHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHHCC---CCCCCCC---CC----CHHHHHHHHHHccC
Confidence            99988889999999999999999999 88887544332222211111   1111111   11    13467899999999


Q ss_pred             CCCCCCChHHHHHHhc
Q 041793          164 HPKDRPSMPSVILMLG  179 (224)
Q Consensus       164 dp~~Rps~~~v~~~L~  179 (224)
                      +|++||++.++++.|.
T Consensus       241 ~p~~Rps~~~l~~~l~  256 (256)
T cd05114         241 KPEGRPTFAELLRAIT  256 (256)
T ss_pred             CcccCcCHHHHHHhhC
Confidence            9999999999998873


No 78 
>cd05601 STKc_CRIK Catalytic domain of the Protein Serine/Threonine Kinase, Citron Rho-interacting kinase. Serine/Threonine Kinases (STKs), Citron Rho-interacting kinase (CRIK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CRIK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CRIK is also called citron kinase. It contains a catalytic domain, a central coiled-coil domain, and a C-terminal region containing a Rho-binding domain (RBD), a zinc finger, and a pleckstrin homology (PH) domain, in addition to other motifs. CRIK, an effector of the small GTPase Rho, plays an important function during cytokinesis and affects its contractile process. CRIK-deficient mice show severe ataxia and epilepsy as a result of abnor
Probab=99.95  E-value=3.7e-28  Score=198.25  Aligned_cols=161  Identities=22%  Similarity=0.304  Sum_probs=118.6

Q ss_pred             CCCChHHHHHHHHHHHHHHhhhhcCCCCceEecCCCCCceEECCCCCceEeeecceeecCCCCCCCcccccccccccCCc
Q 041793            5 KILDWPKRFHIICGTARGVMYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDEIEGNTNRVIGTYGYMAP   84 (224)
Q Consensus         5 ~~l~~~~~~~i~~qi~~~l~~Lh~~~~~~i~H~dl~~~nil~~~~~~~kl~df~~~~~~~~~~~~~~~~~~~~~~~y~aP   84 (224)
                      +.+++..+..++.||+.||+|||+.+   |+||||||+||+++.++.++|+|||++......... ......++..|+||
T Consensus        97 ~~l~~~~~~~~~~qi~~aL~~lH~~~---i~H~Dlkp~NIll~~~~~~kL~Dfg~a~~~~~~~~~-~~~~~~gt~~y~aP  172 (330)
T cd05601          97 DQFDEDMAQFYLAELVLAIHSVHQMG---YVHRDIKPENVLIDRTGHIKLADFGSAARLTANKMV-NSKLPVGTPDYIAP  172 (330)
T ss_pred             CCCCHHHHHHHHHHHHHHHHHHHHCC---eEcccCchHheEECCCCCEEeccCCCCeECCCCCce-eeecccCCccccCH
Confidence            57899999999999999999999999   999999999999999999999999999876432211 12224578899999


Q ss_pred             cccc------CCCcccccceEehhHHHHHHHhcccCCCCcCCCcccccccccCCCccccCccccCCcCHHHHHHHHHHHH
Q 041793           85 EYAS------DGKFSVKSDVFSFGILLLEIISGKKNRGFYHSDNKLNLIGHVSMPSQLIDPCIQGSFNLVEVIRCIHIGL  158 (224)
Q Consensus        85 E~~~------~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~  158 (224)
                      |.+.      +..++.++|||||||++|+|++|..||...........+.........+.   ....    ...+.+|+.
T Consensus       173 E~~~~~~~~~~~~~~~~~DiwslG~il~el~~g~~Pf~~~~~~~~~~~i~~~~~~~~~~~---~~~~----~~~~~~li~  245 (330)
T cd05601         173 EVLTTMNGDGKGTYGVECDWWSLGVIAYEMIYGRSPFHEGTSAKTYNNIMNFQRFLKFPE---DPKV----SSDFLDLIQ  245 (330)
T ss_pred             HHhccccccccCCCCCcceeecccceeeeeccCCCCCCCCCHHHHHHHHHcCCCccCCCC---CCCC----CHHHHHHHH
Confidence            9986      44577899999999999999999999864332211111100000000000   0011    123667888


Q ss_pred             HhccCCCCCCCChHHHHHH
Q 041793          159 LCVQQHPKDRPSMPSVILM  177 (224)
Q Consensus       159 ~cl~~dp~~Rps~~~v~~~  177 (224)
                      .||+ +|.+||+++++++.
T Consensus       246 ~ll~-~p~~R~t~~~l~~h  263 (330)
T cd05601         246 SLLC-GQKERLGYEGLCCH  263 (330)
T ss_pred             HHcc-ChhhCCCHHHHhCC
Confidence            9998 99999999999863


No 79 
>cd05592 STKc_nPKC_theta_delta Catalytic domain of the Protein Serine/Threonine Kinases, Novel Protein Kinase C theta and delta. Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), theta and delta-like isoforms, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-theta is selectively expressed in T-cells and plays an imp
Probab=99.95  E-value=9.8e-28  Score=194.77  Aligned_cols=157  Identities=26%  Similarity=0.359  Sum_probs=119.8

Q ss_pred             CCCCChHHHHHHHHHHHHHHhhhhcCCCCceEecCCCCCceEECCCCCceEeeecceeecCCCCCCCcccccccccccCC
Q 041793            4 CKILDWPKRFHIICGTARGVMYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDEIEGNTNRVIGTYGYMA   83 (224)
Q Consensus         4 ~~~l~~~~~~~i~~qi~~~l~~Lh~~~~~~i~H~dl~~~nil~~~~~~~kl~df~~~~~~~~~~~~~~~~~~~~~~~y~a   83 (224)
                      .+.+++.++..++.||+.||.|||+.+   |+||||||+||+++.++.++|+|||++.......  .......|+..|+|
T Consensus        90 ~~~~~~~~~~~~~~qi~~al~~LH~~~---ivH~dlkp~Nill~~~~~~kL~Dfg~a~~~~~~~--~~~~~~~gt~~y~a  164 (316)
T cd05592          90 SGRFDEARARFYAAEIICGLQFLHKKG---IIYRDLKLDNVLLDKDGHIKIADFGMCKENMNGE--GKASTFCGTPDYIA  164 (316)
T ss_pred             cCCCCHHHHHHHHHHHHHHHHHHHHCC---EEeCCCCHHHeEECCCCCEEEccCcCCeECCCCC--CccccccCCccccC
Confidence            457899999999999999999999999   9999999999999999999999999987643222  12233467889999


Q ss_pred             cccccCCCcccccceEehhHHHHHHHhcccCCCCcCCCcccccccccCCCccccCccccCCcCHHHHHHHHHHHHHhccC
Q 041793           84 PEYASDGKFSVKSDVFSFGILLLEIISGKKNRGFYHSDNKLNLIGHVSMPSQLIDPCIQGSFNLVEVIRCIHIGLLCVQQ  163 (224)
Q Consensus        84 PE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~  163 (224)
                      ||.+.+..++.++|+|||||++|+|++|..||..........   .+.....    ..+...    ...+.+++.+||+.
T Consensus       165 PE~~~~~~~~~~~DvwslG~il~ell~G~~Pf~~~~~~~~~~---~i~~~~~----~~~~~~----~~~~~~ll~~~l~~  233 (316)
T cd05592         165 PEILKGQKYNESVDWWSFGVLLYEMLIGQSPFHGEDEDELFD---SILNDRP----HFPRWI----SKEAKDCLSKLFER  233 (316)
T ss_pred             HHHHcCCCCCCcccchhHHHHHHHHHhCCCCCCCCCHHHHHH---HHHcCCC----CCCCCC----CHHHHHHHHHHccC
Confidence            999998889999999999999999999999986543221111   1111000    011111    12456788899999


Q ss_pred             CCCCCCChH-HHHH
Q 041793          164 HPKDRPSMP-SVIL  176 (224)
Q Consensus       164 dp~~Rps~~-~v~~  176 (224)
                      ||++||++. ++++
T Consensus       234 ~P~~R~~~~~~l~~  247 (316)
T cd05592         234 DPTKRLGVDGDIRQ  247 (316)
T ss_pred             CHHHcCCChHHHHc
Confidence            999999876 4543


No 80 
>PTZ00267 NIMA-related protein kinase; Provisional
Probab=99.95  E-value=1.7e-28  Score=209.55  Aligned_cols=160  Identities=19%  Similarity=0.271  Sum_probs=123.0

Q ss_pred             CCCCChHHHHHHHHHHHHHHhhhhcCCCCceEecCCCCCceEECCCCCceEeeecceeecCCCCCCCcccccccccccCC
Q 041793            4 CKILDWPKRFHIICGTARGVMYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDEIEGNTNRVIGTYGYMA   83 (224)
Q Consensus         4 ~~~l~~~~~~~i~~qi~~~l~~Lh~~~~~~i~H~dl~~~nil~~~~~~~kl~df~~~~~~~~~~~~~~~~~~~~~~~y~a   83 (224)
                      ..++++.++..++.||+.||.|||+.+   |+||||||+||+++.++.+||+|||++................|+..|+|
T Consensus       163 ~~~l~~~~~~~i~~qi~~aL~~lH~~~---ivHrDlkp~NIll~~~~~~kL~DFgla~~~~~~~~~~~~~~~~gt~~y~a  239 (478)
T PTZ00267        163 HLPFQEYEVGLLFYQIVLALDEVHSRK---MMHRDLKSANIFLMPTGIIKLGDFGFSKQYSDSVSLDVASSFCGTPYYLA  239 (478)
T ss_pred             cCCCCHHHHHHHHHHHHHHHHHHHhCC---EEECCcCHHhEEECCCCcEEEEeCcCceecCCccccccccccCCCccccC
Confidence            456889999999999999999999999   99999999999999999999999999987644322222334568899999


Q ss_pred             cccccCCCcccccceEehhHHHHHHHhcccCCCCcCCCcccccccccCCCccccCccccCCcCHHHHHHHHHHHHHhccC
Q 041793           84 PEYASDGKFSVKSDVFSFGILLLEIISGKKNRGFYHSDNKLNLIGHVSMPSQLIDPCIQGSFNLVEVIRCIHIGLLCVQQ  163 (224)
Q Consensus        84 PE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~  163 (224)
                      ||.+.+..++.++|||||||++|+|++|+.||.......   .+........  .+ .+...+    ..+.++|.+||+.
T Consensus       240 PE~~~~~~~~~~~Dv~slG~~l~el~tg~~Pf~~~~~~~---~~~~~~~~~~--~~-~~~~~s----~~~~~li~~~L~~  309 (478)
T PTZ00267        240 PELWERKRYSKKADMWSLGVILYELLTLHRPFKGPSQRE---IMQQVLYGKY--DP-FPCPVS----SGMKALLDPLLSK  309 (478)
T ss_pred             HhHhCCCCCCcHHhHHHHHHHHHHHHhCCCCCCCCCHHH---HHHHHHhCCC--CC-CCccCC----HHHHHHHHHHhcc
Confidence            999988889999999999999999999999985433221   1111111000  00 001111    3467888999999


Q ss_pred             CCCCCCChHHHHH
Q 041793          164 HPKDRPSMPSVIL  176 (224)
Q Consensus       164 dp~~Rps~~~v~~  176 (224)
                      ||++||++++++.
T Consensus       310 dP~~Rps~~~~l~  322 (478)
T PTZ00267        310 NPALRPTTQQLLH  322 (478)
T ss_pred             ChhhCcCHHHHHh
Confidence            9999999999864


No 81 
>cd05099 PTKc_FGFR4 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 4. Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 4 (FGFR4); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR4 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to
Probab=99.95  E-value=3.2e-28  Score=197.34  Aligned_cols=164  Identities=29%  Similarity=0.386  Sum_probs=123.4

Q ss_pred             CCCChHHHHHHHHHHHHHHhhhhcCCCCceEecCCCCCceEECCCCCceEeeecceeecCCCCCCCcccccccccccCCc
Q 041793            5 KILDWPKRFHIICGTARGVMYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDEIEGNTNRVIGTYGYMAP   84 (224)
Q Consensus         5 ~~l~~~~~~~i~~qi~~~l~~Lh~~~~~~i~H~dl~~~nil~~~~~~~kl~df~~~~~~~~~~~~~~~~~~~~~~~y~aP   84 (224)
                      ..+++.++..++.||+.||.|||+.|   ++|+||+|+||+++.++.++|+|||++................++..|+||
T Consensus       129 ~~l~~~~~~~~~~qi~~aL~~lH~~g---i~H~dlkp~Nill~~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aP  205 (314)
T cd05099         129 EQLSFKDLVSCAYQVARGMEYLESRR---CIHRDLAARNVLVTEDNVMKIADFGLARGVHDIDYYKKTSNGRLPVKWMAP  205 (314)
T ss_pred             cccCHHHHHHHHHHHHHHHHHHHHCC---eeeccccceeEEEcCCCcEEEccccccccccccccccccccCCCCccccCH
Confidence            56899999999999999999999999   999999999999999999999999999765432211111112234579999


Q ss_pred             ccccCCCcccccceEehhHHHHHHHh-cccCCCCcCCCcccccccccCCCccccCccccCCcCHHHHHHHHHHHHHhccC
Q 041793           85 EYASDGKFSVKSDVFSFGILLLEIIS-GKKNRGFYHSDNKLNLIGHVSMPSQLIDPCIQGSFNLVEVIRCIHIGLLCVQQ  163 (224)
Q Consensus        85 E~~~~~~~~~~~Di~slG~il~~l~~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~  163 (224)
                      |.+.+..++.++|+||||+++|++++ |..||.................    .+  .....    ...+.+++.+||..
T Consensus       206 E~~~~~~~~~~~DiwslG~~l~el~~~g~~p~~~~~~~~~~~~~~~~~~----~~--~~~~~----~~~l~~li~~cl~~  275 (314)
T cd05099         206 EALFDRVYTHQSDVWSFGILMWEIFTLGGSPYPGIPVEELFKLLREGHR----MD--KPSNC----THELYMLMRECWHA  275 (314)
T ss_pred             HHHccCCcCccchhhHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHcCCC----CC--CCCCC----CHHHHHHHHHHcCC
Confidence            99988889999999999999999998 7888754332222222111110    00  01111    12466888999999


Q ss_pred             CCCCCCChHHHHHHhccC
Q 041793          164 HPKDRPSMPSVILMLGSE  181 (224)
Q Consensus       164 dp~~Rps~~~v~~~L~~~  181 (224)
                      ||++||++.++++.|+..
T Consensus       276 ~p~~Rps~~~ll~~l~~~  293 (314)
T cd05099         276 VPTQRPTFKQLVEALDKV  293 (314)
T ss_pred             CcccCcCHHHHHHHHHHH
Confidence            999999999999999765


No 82 
>cd05593 STKc_PKB_gamma Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B gamma. Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, gamma (or Akt3) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-gamma is predominantly expressed in neuronal tissues. Mice deficient in PKB-gamma show a reduction in brain weight due to the decreases in cell size and cell number. PKB-gamma has also been shown to be upregulate
Probab=99.95  E-value=3.1e-28  Score=198.71  Aligned_cols=158  Identities=22%  Similarity=0.322  Sum_probs=121.1

Q ss_pred             CCCCChHHHHHHHHHHHHHHhhhhcCCCCceEecCCCCCceEECCCCCceEeeecceeecCCCCCCCcccccccccccCC
Q 041793            4 CKILDWPKRFHIICGTARGVMYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDEIEGNTNRVIGTYGYMA   83 (224)
Q Consensus         4 ~~~l~~~~~~~i~~qi~~~l~~Lh~~~~~~i~H~dl~~~nil~~~~~~~kl~df~~~~~~~~~~~~~~~~~~~~~~~y~a   83 (224)
                      .+.+++.+++.++.||+.||+|||+.|   |+||||||+||+++.++.+||+|||++.......  .......|+..|+|
T Consensus        89 ~~~l~~~~~~~~~~qi~~aL~~LH~~~---ivHrDikp~NIll~~~~~~kL~DfG~~~~~~~~~--~~~~~~~gt~~y~a  163 (328)
T cd05593          89 ERVFSEDRTRFYGAEIVSALDYLHSGK---IVYRDLKLENLMLDKDGHIKITDFGLCKEGITDA--ATMKTFCGTPEYLA  163 (328)
T ss_pred             cCCCCHHHHHHHHHHHHHHHHHHHhCC---eEecccCHHHeEECCCCcEEEecCcCCccCCCcc--cccccccCCcCccC
Confidence            457899999999999999999999999   9999999999999999999999999987532211  11223467889999


Q ss_pred             cccccCCCcccccceEehhHHHHHHHhcccCCCCcCCCcccccccccCCCccccCccccCCcCHHHHHHHHHHHHHhccC
Q 041793           84 PEYASDGKFSVKSDVFSFGILLLEIISGKKNRGFYHSDNKLNLIGHVSMPSQLIDPCIQGSFNLVEVIRCIHIGLLCVQQ  163 (224)
Q Consensus        84 PE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~  163 (224)
                      ||.+.+..++.++|+|||||++|+|++|+.||.......   ....+......+    +...+    ..+.+++.+||+.
T Consensus       164 PE~~~~~~~~~~~DiwslGvil~elltG~~Pf~~~~~~~---~~~~~~~~~~~~----p~~~~----~~~~~li~~~L~~  232 (328)
T cd05593         164 PEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHEK---LFELILMEDIKF----PRTLS----ADAKSLLSGLLIK  232 (328)
T ss_pred             hhhhcCCCCCccCCccccchHHHHHhhCCCCCCCCCHHH---HHHHhccCCccC----CCCCC----HHHHHHHHHHcCC
Confidence            999988889999999999999999999999986433221   111111111111    11111    2466888999999


Q ss_pred             CCCCCC-----ChHHHHHH
Q 041793          164 HPKDRP-----SMPSVILM  177 (224)
Q Consensus       164 dp~~Rp-----s~~~v~~~  177 (224)
                      ||++||     ++.++++.
T Consensus       233 dP~~R~~~~~~~~~~il~h  251 (328)
T cd05593         233 DPNKRLGGGPDDAKEIMRH  251 (328)
T ss_pred             CHHHcCCCCCCCHHHHhcC
Confidence            999997     88888764


No 83 
>PHA03211 serine/threonine kinase US3; Provisional
Probab=99.95  E-value=2.3e-28  Score=206.76  Aligned_cols=109  Identities=24%  Similarity=0.334  Sum_probs=93.9

Q ss_pred             CCCCChHHHHHHHHHHHHHHhhhhcCCCCceEecCCCCCceEECCCCCceEeeecceeecCCCCCCCcccccccccccCC
Q 041793            4 CKILDWPKRFHIICGTARGVMYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDEIEGNTNRVIGTYGYMA   83 (224)
Q Consensus         4 ~~~l~~~~~~~i~~qi~~~l~~Lh~~~~~~i~H~dl~~~nil~~~~~~~kl~df~~~~~~~~~~~~~~~~~~~~~~~y~a   83 (224)
                      .+.+++.+++.++.||+.||.|||+.|   |+||||||+||+++.++.++|+|||++................|+..|++
T Consensus       254 ~~~l~~~~~~~i~~qi~~aL~yLH~~g---IvHrDLKP~NILl~~~~~vkL~DFGla~~~~~~~~~~~~~~~~GT~~Y~A  330 (461)
T PHA03211        254 LRPLGLAQVTAVARQLLSAIDYIHGEG---IIHRDIKTENVLVNGPEDICLGDFGAACFARGSWSTPFHYGIAGTVDTNA  330 (461)
T ss_pred             CCCCCHHHHHHHHHHHHHHHHHHHHCC---EEECcCCHHHEEECCCCCEEEcccCCceecccccccccccccCCCcCCcC
Confidence            357999999999999999999999999   99999999999999999999999999986543222212223468899999


Q ss_pred             cccccCCCcccccceEehhHHHHHHHhcccCC
Q 041793           84 PEYASDGKFSVKSDVFSFGILLLEIISGKKNR  115 (224)
Q Consensus        84 PE~~~~~~~~~~~Di~slG~il~~l~~g~~p~  115 (224)
                      ||.+.+..++.++|||||||++|||++|..++
T Consensus       331 PE~~~~~~~~~~sDvwSlGviL~El~~g~~~l  362 (461)
T PHA03211        331 PEVLAGDPYTPSVDIWSAGLVIFEAAVHTASL  362 (461)
T ss_pred             HHHHcCCCCCchHHHHHHHHHHHHHHHcCCCc
Confidence            99999988999999999999999999887654


No 84 
>cd05620 STKc_nPKC_delta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C delta. Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), delta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-delta plays a role in cell cycle regulation and programmed cell death in many cell types. I
Probab=99.95  E-value=6.6e-28  Score=195.80  Aligned_cols=156  Identities=26%  Similarity=0.353  Sum_probs=119.3

Q ss_pred             CCCCChHHHHHHHHHHHHHHhhhhcCCCCceEecCCCCCceEECCCCCceEeeecceeecCCCCCCCcccccccccccCC
Q 041793            4 CKILDWPKRFHIICGTARGVMYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDEIEGNTNRVIGTYGYMA   83 (224)
Q Consensus         4 ~~~l~~~~~~~i~~qi~~~l~~Lh~~~~~~i~H~dl~~~nil~~~~~~~kl~df~~~~~~~~~~~~~~~~~~~~~~~y~a   83 (224)
                      ++.+++.++..++.||+.||+|||+.|   |+||||||+||+++.++.++|+|||++.......  .......|+..|+|
T Consensus        90 ~~~~~~~~~~~~~~qi~~~l~~lH~~~---ivHrDlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~--~~~~~~~gt~~y~a  164 (316)
T cd05620          90 KGRFDLYRATFYAAEIVCGLQFLHSKG---IIYRDLKLDNVMLDRDGHIKIADFGMCKENVFGD--NRASTFCGTPDYIA  164 (316)
T ss_pred             cCCCCHHHHHHHHHHHHHHHHHHHHCC---eEecCCCHHHeEECCCCCEEeCccCCCeecccCC--CceeccCCCcCccC
Confidence            457899999999999999999999999   9999999999999999999999999987532211  11233567889999


Q ss_pred             cccccCCCcccccceEehhHHHHHHHhcccCCCCcCCCcccccccccCCCccccCccccCCcCHHHHHHHHHHHHHhccC
Q 041793           84 PEYASDGKFSVKSDVFSFGILLLEIISGKKNRGFYHSDNKLNLIGHVSMPSQLIDPCIQGSFNLVEVIRCIHIGLLCVQQ  163 (224)
Q Consensus        84 PE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~  163 (224)
                      ||.+.+..++.++|+|||||++|+|++|..||.......   ....+.....    ..+...    ...+.+++.+||+.
T Consensus       165 PE~~~~~~~~~~~DiwslGvil~el~~g~~Pf~~~~~~~---~~~~~~~~~~----~~~~~~----~~~~~~li~~~l~~  233 (316)
T cd05620         165 PEILQGLKYTFSVDWWSFGVLLYEMLIGQSPFHGDDEDE---LFESIRVDTP----HYPRWI----TKESKDILEKLFER  233 (316)
T ss_pred             HHHHcCCCCCcccchhhhHHHHHHHHhCCCCCCCCCHHH---HHHHHHhCCC----CCCCCC----CHHHHHHHHHHccC
Confidence            999998899999999999999999999999986433221   1111111110    011111    13466888999999


Q ss_pred             CCCCCCChH-HHH
Q 041793          164 HPKDRPSMP-SVI  175 (224)
Q Consensus       164 dp~~Rps~~-~v~  175 (224)
                      ||++||++. +++
T Consensus       234 dP~~R~~~~~~~~  246 (316)
T cd05620         234 DPTRRLGVVGNIR  246 (316)
T ss_pred             CHHHcCCChHHHH
Confidence            999999985 555


No 85 
>cd05062 PTKc_IGF-1R Catalytic domain of the Protein Tyrosine Kinase, Insulin-like Growth Factor-1 Receptor. Protein Tyrosine Kinase (PTK) family; Insulin-like Growth Factor-1 Receptor (IGF-1R); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. IGF-1R is a receptor tyr kinases (RTK) that is composed of two alphabeta heterodimers. Binding of the ligand (IGF-1 or IGF-2) to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, which stimulates downstream kinase activities and biological function. IGF-1R signaling is important in the differentiation, growth, and survival of normal cells. In cancer cells, wh
Probab=99.95  E-value=2.1e-28  Score=194.92  Aligned_cols=161  Identities=27%  Similarity=0.426  Sum_probs=120.4

Q ss_pred             CCChHHHHHHHHHHHHHHhhhhcCCCCceEecCCCCCceEECCCCCceEeeecceeecCCCCCCCcccccccccccCCcc
Q 041793            6 ILDWPKRFHIICGTARGVMYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDEIEGNTNRVIGTYGYMAPE   85 (224)
Q Consensus         6 ~l~~~~~~~i~~qi~~~l~~Lh~~~~~~i~H~dl~~~nil~~~~~~~kl~df~~~~~~~~~~~~~~~~~~~~~~~y~aPE   85 (224)
                      .+++.+++.++.|++.||.|||+.+   ++|+||||+||+++.++.++++|||++................++..|+|||
T Consensus       115 ~~~~~~~~~~~~~l~~~l~~lH~~~---~vH~dlkp~Nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE  191 (277)
T cd05062         115 PPSLKKMIQMAGEIADGMAYLNANK---FVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMSPE  191 (277)
T ss_pred             CCCHHHHHHHHHHHHHHHHHHHHCC---cccCCcchheEEEcCCCCEEECCCCCccccCCcceeecCCCCccCHhhcChh
Confidence            4678899999999999999999999   9999999999999999999999999987553322111111223466799999


Q ss_pred             cccCCCcccccceEehhHHHHHHHh-cccCCCCcCCCcccccccccCCCccccCccccCCcCHHHHHHHHHHHHHhccCC
Q 041793           86 YASDGKFSVKSDVFSFGILLLEIIS-GKKNRGFYHSDNKLNLIGHVSMPSQLIDPCIQGSFNLVEVIRCIHIGLLCVQQH  164 (224)
Q Consensus        86 ~~~~~~~~~~~Di~slG~il~~l~~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~d  164 (224)
                      .+.+..++.++|+||||+++|++++ |..||.................    .+.  ....    ...+.+++.+||+.|
T Consensus       192 ~~~~~~~~~~~Di~slG~~l~el~~~~~~p~~~~~~~~~~~~~~~~~~----~~~--~~~~----~~~~~~li~~~l~~~  261 (277)
T cd05062         192 SLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGMSNEQVLRFVMEGGL----LDK--PDNC----PDMLFELMRMCWQYN  261 (277)
T ss_pred             HhhcCCcCchhHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHHcCCc----CCC--CCCC----CHHHHHHHHHHcCCC
Confidence            9988889999999999999999998 6788754332221111111110    000  0111    124678999999999


Q ss_pred             CCCCCChHHHHHHhc
Q 041793          165 PKDRPSMPSVILMLG  179 (224)
Q Consensus       165 p~~Rps~~~v~~~L~  179 (224)
                      |++|||+.++++.|+
T Consensus       262 p~~Rps~~e~l~~l~  276 (277)
T cd05062         262 PKMRPSFLEIISSIK  276 (277)
T ss_pred             hhhCcCHHHHHHHhh
Confidence            999999999999885


No 86 
>cd05033 PTKc_EphR Catalytic domain of Ephrin Receptor Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). They can be classified into two classes (EphA and EphB), according to their extracellular sequences, which largely correspond to binding preferences for either GPI-anchored ephrin-A ligands or transmembrane ephrin-B ligands. Vertebrates have ten EphA and six EhpB receptors, which display promiscuous ligand interactions within each class. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment
Probab=99.95  E-value=3.6e-28  Score=192.35  Aligned_cols=165  Identities=26%  Similarity=0.379  Sum_probs=124.1

Q ss_pred             CCCCChHHHHHHHHHHHHHHhhhhcCCCCceEecCCCCCceEECCCCCceEeeecceeecCCCCCCCcccccccccccCC
Q 041793            4 CKILDWPKRFHIICGTARGVMYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDEIEGNTNRVIGTYGYMA   83 (224)
Q Consensus         4 ~~~l~~~~~~~i~~qi~~~l~~Lh~~~~~~i~H~dl~~~nil~~~~~~~kl~df~~~~~~~~~~~~~~~~~~~~~~~y~a   83 (224)
                      .+.+++.+++.++.|++.||.|||+.+   |+|+||+|+||+++.++.++++|||++................++..|++
T Consensus       100 ~~~~~~~~~~~~~~~l~~~l~~Lh~~~---i~H~di~p~nili~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~y~~  176 (266)
T cd05033         100 DGKFTVGQLVGMLRGIASGMKYLSEMN---YVHRDLAARNILVNSNLVCKVSDFGLSRRLEDSEATYTTKGGKIPIRWTA  176 (266)
T ss_pred             cCCCCHHHHHHHHHHHHHHHHHHHhCC---cccCCCCcceEEEcCCCCEEECccchhhcccccccceeccCCCCCccccC
Confidence            347899999999999999999999999   99999999999999999999999999987642211111111233567999


Q ss_pred             cccccCCCcccccceEehhHHHHHHHh-cccCCCCcCCCcccccccccCCCccccCccccCCcCHHHHHHHHHHHHHhcc
Q 041793           84 PEYASDGKFSVKSDVFSFGILLLEIIS-GKKNRGFYHSDNKLNLIGHVSMPSQLIDPCIQGSFNLVEVIRCIHIGLLCVQ  162 (224)
Q Consensus        84 PE~~~~~~~~~~~Di~slG~il~~l~~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~  162 (224)
                      ||.+.+..++.++|+||||++++++++ |..||...........+....   ....   ....    ...+.+++.+||+
T Consensus       177 Pe~~~~~~~~~~~Dv~slG~~l~~l~~~g~~p~~~~~~~~~~~~~~~~~---~~~~---~~~~----~~~l~~li~~cl~  246 (266)
T cd05033         177 PEAIAYRKFTSASDVWSFGIVMWEVMSYGERPYWDMSNQDVIKAVEDGY---RLPP---PMDC----PSALYQLMLDCWQ  246 (266)
T ss_pred             hhhhccCCCccccchHHHHHHHHHHHccCCCCCCCCCHHHHHHHHHcCC---CCCC---CCCC----CHHHHHHHHHHcC
Confidence            999988889999999999999999997 888875433222111111110   1000   0111    1346789999999


Q ss_pred             CCCCCCCChHHHHHHhccC
Q 041793          163 QHPKDRPSMPSVILMLGSE  181 (224)
Q Consensus       163 ~dp~~Rps~~~v~~~L~~~  181 (224)
                      .+|++||++.+|++.|+..
T Consensus       247 ~~p~~Rp~~~ei~~~l~~~  265 (266)
T cd05033         247 KDRNERPTFSQIVSTLDKM  265 (266)
T ss_pred             CCcccCcCHHHHHHHHHhh
Confidence            9999999999999999754


No 87 
>cd05097 PTKc_DDR_like Catalytic domain of Discoidin Domain Receptor-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Discoidin Domain Receptor (DDR)-like proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR-like proteins are members of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDRs regulate cell adhesion, proliferation, and extracellular matrix remodeling. They have been linked to a variety of human cancers including 
Probab=99.95  E-value=3.1e-28  Score=195.73  Aligned_cols=166  Identities=23%  Similarity=0.340  Sum_probs=120.5

Q ss_pred             CCChHHHHHHHHHHHHHHhhhhcCCCCceEecCCCCCceEECCCCCceEeeecceeecCCCCCCCcccccccccccCCcc
Q 041793            6 ILDWPKRFHIICGTARGVMYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDEIEGNTNRVIGTYGYMAPE   85 (224)
Q Consensus         6 ~l~~~~~~~i~~qi~~~l~~Lh~~~~~~i~H~dl~~~nil~~~~~~~kl~df~~~~~~~~~~~~~~~~~~~~~~~y~aPE   85 (224)
                      .+++.+++.++.|++.||.|||+.+   ++|+||+|+||+++.++.++|+|||++................++..|+|||
T Consensus       125 ~~~~~~~~~i~~~i~~al~~lH~~~---i~H~dlkp~Nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE  201 (295)
T cd05097         125 SVSIANLLYMAVQIASGMKYLASLN---FVHRDLATRNCLVGNHYTIKIADFGMSRNLYSGDYYRIQGRAVLPIRWMAWE  201 (295)
T ss_pred             cccHHHHHHHHHHHHHHHHHHHhcC---eeccccChhhEEEcCCCcEEecccccccccccCcceeccCcCcCceeecChh
Confidence            4788999999999999999999999   9999999999999999999999999987653322111112233466899999


Q ss_pred             cccCCCcccccceEehhHHHHHHHh--cccCCCCcCCCcccccccccCC--CccccCccccCCcCHHHHHHHHHHHHHhc
Q 041793           86 YASDGKFSVKSDVFSFGILLLEIIS--GKKNRGFYHSDNKLNLIGHVSM--PSQLIDPCIQGSFNLVEVIRCIHIGLLCV  161 (224)
Q Consensus        86 ~~~~~~~~~~~Di~slG~il~~l~~--g~~p~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~li~~cl  161 (224)
                      .+.+..++.++|+||||+++++|++  +..||.................  ...... ......    ...+.+|+.+||
T Consensus       202 ~~~~~~~~~~~DvwSlG~~l~el~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~----~~~l~~li~~~l  276 (295)
T cd05097         202 SILLGKFTTASDVWAFGVTLWEMFTLCKEQPYSLLSDEQVIENTGEFFRNQGRQIYL-SQTPLC----PSPVFKLMMRCW  276 (295)
T ss_pred             hhccCCcCchhhHHHHHHHHHHHHHcCCCCCCcccChHHHHHHHHHhhhhccccccC-CCCCCC----CHHHHHHHHHHc
Confidence            9988889999999999999999988  5566654332221111110000  000000 001111    135778999999


Q ss_pred             cCCCCCCCChHHHHHHhc
Q 041793          162 QQHPKDRPSMPSVILMLG  179 (224)
Q Consensus       162 ~~dp~~Rps~~~v~~~L~  179 (224)
                      +.||++|||+.+|++.|+
T Consensus       277 ~~~p~~RPs~~~i~~~l~  294 (295)
T cd05097         277 SRDIKDRPTFNKIHHFLR  294 (295)
T ss_pred             CCCchhCcCHHHHHHHHh
Confidence            999999999999999985


No 88 
>cd05090 PTKc_Ror1 Catalytic domain of the Protein Tyrosine Kinase, Receptor tyrosine kinase-like Orphan Receptor 1. Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor 1 (Ror1); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase cataly
Probab=99.95  E-value=2.6e-28  Score=194.96  Aligned_cols=163  Identities=29%  Similarity=0.427  Sum_probs=123.1

Q ss_pred             CCCChHHHHHHHHHHHHHHhhhhcCCCCceEecCCCCCceEECCCCCceEeeecceeecCCCCCCCcccccccccccCCc
Q 041793            5 KILDWPKRFHIICGTARGVMYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDEIEGNTNRVIGTYGYMAP   84 (224)
Q Consensus         5 ~~l~~~~~~~i~~qi~~~l~~Lh~~~~~~i~H~dl~~~nil~~~~~~~kl~df~~~~~~~~~~~~~~~~~~~~~~~y~aP   84 (224)
                      ..+++.+++.++.|++.||.|||+++   ++|+||+|+||+++.++.++++|||++................++..|+||
T Consensus       119 ~~~~~~~~~~i~~~i~~al~~lH~~~---i~H~dlkp~nili~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~aP  195 (283)
T cd05090         119 SSLDHGDFLHIAIQIAAGMEYLSSHF---FVHKDLAARNILIGEQLHVKISDLGLSREIYSADYYRVQPKSLLPIRWMPP  195 (283)
T ss_pred             cccCHHHHHHHHHHHHHHHHHHHhcC---eehhccccceEEEcCCCcEEeccccccccccCCcceecccCCCccceecCh
Confidence            45889999999999999999999999   999999999999999999999999999765432211112223345679999


Q ss_pred             ccccCCCcccccceEehhHHHHHHHh-cccCCCCcCCCcccccccccCCCccccCccccCCcCHHHHHHHHHHHHHhccC
Q 041793           85 EYASDGKFSVKSDVFSFGILLLEIIS-GKKNRGFYHSDNKLNLIGHVSMPSQLIDPCIQGSFNLVEVIRCIHIGLLCVQQ  163 (224)
Q Consensus        85 E~~~~~~~~~~~Di~slG~il~~l~~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~  163 (224)
                      |.+.+..++.++|+||||+++++|++ |..||................   ...   .....+    ..+.+++.+||+.
T Consensus       196 E~~~~~~~~~~~Dv~slG~il~el~~~g~~p~~~~~~~~~~~~~~~~~---~~~---~~~~~~----~~~~~li~~cl~~  265 (283)
T cd05090         196 EAIMYGKFSSDSDIWSFGVVLWEIFSFGLQPYYGFSNQEVIEMVRKRQ---LLP---CSEDCP----PRMYSLMTECWQE  265 (283)
T ss_pred             HHhccCCCCchhhhHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHHcCC---cCC---CCCCCC----HHHHHHHHHHccc
Confidence            99988888999999999999999998 888875433222222221111   100   111112    2467788999999


Q ss_pred             CCCCCCChHHHHHHhcc
Q 041793          164 HPKDRPSMPSVILMLGS  180 (224)
Q Consensus       164 dp~~Rps~~~v~~~L~~  180 (224)
                      ||++||++.+|++.|..
T Consensus       266 ~p~~Rp~~~~i~~~l~~  282 (283)
T cd05090         266 GPSRRPRFKDIHTRLRS  282 (283)
T ss_pred             CcccCcCHHHHHHHhhc
Confidence            99999999999998853


No 89 
>KOG0658 consensus Glycogen synthase kinase-3 [Carbohydrate transport and metabolism]
Probab=99.95  E-value=8.5e-29  Score=194.94  Aligned_cols=168  Identities=24%  Similarity=0.254  Sum_probs=124.4

Q ss_pred             CCCCChHHHHHHHHHHHHHHhhhhcCCCCceEecCCCCCceEECCC-CCceEeeecceeecCCCCCCCcccccccccccC
Q 041793            4 CKILDWPKRFHIICGTARGVMYLHQDSRLRIIHRDLKASNVLLDQD-MNPKISDFGLARAFGGDEIEGNTNRVIGTYGYM   82 (224)
Q Consensus         4 ~~~l~~~~~~~i~~qi~~~l~~Lh~~~~~~i~H~dl~~~nil~~~~-~~~kl~df~~~~~~~~~~~~~~~~~~~~~~~y~   82 (224)
                      +..++.-.+.-+..||..||+|||..|   |+||||||+|+|+|.+ |.+||+|||.|.....+..   ...+.++..|+
T Consensus       119 ~~~mp~~~iKLYt~Qlfrgl~yLh~~~---IcHRDIKPqNlLvD~~tg~LKicDFGSAK~L~~~ep---niSYicSRyYR  192 (364)
T KOG0658|consen  119 NQRMPLLEIKLYTYQLFRGLAYLHSHG---ICHRDIKPQNLLVDPDTGVLKICDFGSAKVLVKGEP---NISYICSRYYR  192 (364)
T ss_pred             CCCCceeeeHHHHHHHHHHHHHHHhcC---cccCCCChheEEEcCCCCeEEeccCCcceeeccCCC---ceeEEEecccc
Confidence            456677778889999999999999999   9999999999999966 9999999999998755432   23456788899


Q ss_pred             CcccccCC-CcccccceEehhHHHHHHHhcccCCCCcCCCcccccccc-cCCC-----------------ccccCccccC
Q 041793           83 APEYASDG-KFSVKSDVFSFGILLLEIISGKKNRGFYHSDNKLNLIGH-VSMP-----------------SQLIDPCIQG  143 (224)
Q Consensus        83 aPE~~~~~-~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~-~~~~-----------------~~~~~~~~~~  143 (224)
                      |||++.|. .|+.+.||||.||++.||+-|++.|.+....+....+-. ...+                 .++....+..
T Consensus       193 aPELifga~~Yt~~IDiWSaGCV~aELl~g~plFpG~s~~dQL~eIik~lG~Pt~e~I~~mn~~y~~~~~p~ik~~~~~~  272 (364)
T KOG0658|consen  193 APELIFGATEYTTSIDIWSAGCVMAELLKGQPLFPGDSSVDQLVEIIKVLGTPTREDIKSMNPNYTEFKFPQIKAHPWHK  272 (364)
T ss_pred             CHHHHcCccccCceeEEhhhhHHHHHHhcCCcccCCCCHHHHHHHHHHHhCCCCHHHHhhcCcccccccCccccccccee
Confidence            99999875 589999999999999999999999877554433322211 1100                 0011111101


Q ss_pred             CcCHHHHHHHHHHHHHhccCCCCCCCChHHHHHH
Q 041793          144 SFNLVEVIRCIHIGLLCVQQHPKDRPSMPSVILM  177 (224)
Q Consensus       144 ~~~~~~~~~~~~li~~cl~~dp~~Rps~~~v~~~  177 (224)
                      ..........++|+.++|+++|.+|.++.|++..
T Consensus       273 ~~~~~~~~d~~dll~~~L~Y~P~~R~~~~~~l~h  306 (364)
T KOG0658|consen  273 VFFKRLPPDALDLLSKLLQYSPSKRLSALEALAH  306 (364)
T ss_pred             ecccCCCHHHHHHHHHHhccChhhcCCHHHHhcc
Confidence            0111122356789999999999999999998764


No 90 
>cd05618 STKc_aPKC_iota Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C iota. Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, iota isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. There are two aPKC isoforms, zeta and iota. PKC-iota is directly implicated in carcinogenesis. It is critical to oncogenic signaling mediated by Ras and Bcr-Abl. The PKC-iota gene is the target o
Probab=99.95  E-value=2e-28  Score=199.95  Aligned_cols=155  Identities=25%  Similarity=0.386  Sum_probs=116.2

Q ss_pred             CCCCChHHHHHHHHHHHHHHhhhhcCCCCceEecCCCCCceEECCCCCceEeeecceeecCCCCCCCcccccccccccCC
Q 041793            4 CKILDWPKRFHIICGTARGVMYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDEIEGNTNRVIGTYGYMA   83 (224)
Q Consensus         4 ~~~l~~~~~~~i~~qi~~~l~~Lh~~~~~~i~H~dl~~~nil~~~~~~~kl~df~~~~~~~~~~~~~~~~~~~~~~~y~a   83 (224)
                      .+.+++..++.++.||+.||.|||+.|   |+||||||+||+++.++.++|+|||++.......  .......|+..|+|
T Consensus        90 ~~~l~~~~~~~i~~qi~~~l~~lH~~~---ivH~Dikp~Nili~~~~~~kL~DfG~~~~~~~~~--~~~~~~~gt~~y~a  164 (329)
T cd05618          90 QRKLPEEHARFYSAEISLALNYLHERG---IIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRPG--DTTSTFCGTPNYIA  164 (329)
T ss_pred             cCCCCHHHHHHHHHHHHHHHHHHHHCC---eeeCCCCHHHEEECCCCCEEEeeCCccccccCCC--CccccccCCccccC
Confidence            467899999999999999999999999   9999999999999999999999999987532211  11223567889999


Q ss_pred             cccccCCCcccccceEehhHHHHHHHhcccCCCCcCCCcccc------cccccCCCccccCccccCCcCHHHHHHHHHHH
Q 041793           84 PEYASDGKFSVKSDVFSFGILLLEIISGKKNRGFYHSDNKLN------LIGHVSMPSQLIDPCIQGSFNLVEVIRCIHIG  157 (224)
Q Consensus        84 PE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li  157 (224)
                      ||.+.+..++.++|+|||||++|+|++|+.||..........      ....+.. ...   ..+...+    ..+.+++
T Consensus       165 PE~~~~~~~~~~~DiwslG~il~el~~g~~Pf~~~~~~~~~~~~~~~~~~~~i~~-~~~---~~p~~~~----~~~~~ll  236 (329)
T cd05618         165 PEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQNTEDYLFQVILE-KQI---RIPRSLS----VKAASVL  236 (329)
T ss_pred             HHHHcCCCCCCccceecccHHHHHHhhCCCCCccCCCcCCcccccHHHHHHHHhc-CCC---CCCCCCC----HHHHHHH
Confidence            999999889999999999999999999999985322111100      0000000 000   0111111    3466889


Q ss_pred             HHhccCCCCCCCCh
Q 041793          158 LLCVQQHPKDRPSM  171 (224)
Q Consensus       158 ~~cl~~dp~~Rps~  171 (224)
                      .+||+.||++||++
T Consensus       237 ~~~L~~dP~~R~~~  250 (329)
T cd05618         237 KSFLNKDPKERLGC  250 (329)
T ss_pred             HHHhcCCHHHcCCC
Confidence            99999999999984


No 91 
>cd05072 PTKc_Lyn Catalytic domain of the Protein Tyrosine Kinase, Lyn. Protein Tyrosine Kinase (PTK) family; Lyn kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Lyn is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth fa
Probab=99.95  E-value=4e-28  Score=191.54  Aligned_cols=163  Identities=29%  Similarity=0.445  Sum_probs=123.7

Q ss_pred             CCCCChHHHHHHHHHHHHHHhhhhcCCCCceEecCCCCCceEECCCCCceEeeecceeecCCCCCCCcccccccccccCC
Q 041793            4 CKILDWPKRFHIICGTARGVMYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDEIEGNTNRVIGTYGYMA   83 (224)
Q Consensus         4 ~~~l~~~~~~~i~~qi~~~l~~Lh~~~~~~i~H~dl~~~nil~~~~~~~kl~df~~~~~~~~~~~~~~~~~~~~~~~y~a   83 (224)
                      ...+++.+++.++.|++.||+|||+.+   ++|+||+|+||+++.++.++++|||++......... ......++..|+|
T Consensus        97 ~~~~~~~~~~~~~~~l~~~l~~LH~~~---i~H~dl~p~nili~~~~~~~l~dfg~~~~~~~~~~~-~~~~~~~~~~y~a  172 (261)
T cd05072          97 GGKVLLPKLIDFSAQIAEGMAYIERKN---YIHRDLRAANVLVSESLMCKIADFGLARVIEDNEYT-AREGAKFPIKWTA  172 (261)
T ss_pred             CCCCCHHHHHHHHHHHHHHHHHHHHCC---eeccccchhhEEecCCCcEEECCCccceecCCCcee-ccCCCccceecCC
Confidence            456889999999999999999999999   999999999999999999999999999876432211 1112234567999


Q ss_pred             cccccCCCcccccceEehhHHHHHHHh-cccCCCCcCCCcccccccccCCCccccCccccCCcCHHHHHHHHHHHHHhcc
Q 041793           84 PEYASDGKFSVKSDVFSFGILLLEIIS-GKKNRGFYHSDNKLNLIGHVSMPSQLIDPCIQGSFNLVEVIRCIHIGLLCVQ  162 (224)
Q Consensus        84 PE~~~~~~~~~~~Di~slG~il~~l~~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~  162 (224)
                      ||.+.+..++.++|+||||+++|+|++ |..||...........+....   ..  +. ....    ...+.+++.+||.
T Consensus       173 PE~~~~~~~~~~~Di~slG~~l~~l~t~g~~p~~~~~~~~~~~~~~~~~---~~--~~-~~~~----~~~~~~li~~~l~  242 (261)
T cd05072         173 PEAINFGSFTIKSDVWSFGILLYEIVTYGKIPYPGMSNSDVMSALQRGY---RM--PR-MENC----PDELYDIMKTCWK  242 (261)
T ss_pred             HHHhccCCCChhhhhhhhHHHHHHHHccCCCCCCCCCHHHHHHHHHcCC---CC--CC-CCCC----CHHHHHHHHHHcc
Confidence            999988888999999999999999998 888875433222222111111   00  00 0111    1346789999999


Q ss_pred             CCCCCCCChHHHHHHhcc
Q 041793          163 QHPKDRPSMPSVILMLGS  180 (224)
Q Consensus       163 ~dp~~Rps~~~v~~~L~~  180 (224)
                      .+|++||+++++.+.|+.
T Consensus       243 ~~p~~Rp~~~~i~~~l~~  260 (261)
T cd05072         243 EKAEERPTFDYLQSVLDD  260 (261)
T ss_pred             CCcccCcCHHHHHHHHhc
Confidence            999999999999999864


No 92 
>cd07863 STKc_CDK4 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 4. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 4 (CDK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK4 partners with all three D-type cyclins (D1, D2, and D3) and is also regulated by INK4 inhibitors. It is active towards the retinoblastoma (pRb) protein and plays a role in regulating the early G1 phase of the cell cycle. It is expressed ubiquitou
Probab=99.95  E-value=3.4e-28  Score=194.53  Aligned_cols=166  Identities=23%  Similarity=0.290  Sum_probs=120.0

Q ss_pred             CCCChHHHHHHHHHHHHHHhhhhcCCCCceEecCCCCCceEECCCCCceEeeecceeecCCCCCCCcccccccccccCCc
Q 041793            5 KILDWPKRFHIICGTARGVMYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDEIEGNTNRVIGTYGYMAP   84 (224)
Q Consensus         5 ~~l~~~~~~~i~~qi~~~l~~Lh~~~~~~i~H~dl~~~nil~~~~~~~kl~df~~~~~~~~~~~~~~~~~~~~~~~y~aP   84 (224)
                      ..+++.++..++.||+.||.|||+.|   ++|+||||+||+++.++.++|+|||++.......   ......++..|+||
T Consensus       103 ~~~~~~~~~~~~~qi~~al~~lH~~~---ivH~dikp~Nili~~~~~~kl~dfg~~~~~~~~~---~~~~~~~~~~y~aP  176 (288)
T cd07863         103 PGLPAETIKDLMRQFLRGLDFLHANC---IVHRDLKPENILVTSGGQVKLADFGLARIYSCQM---ALTPVVVTLWYRAP  176 (288)
T ss_pred             CCCCHHHHHHHHHHHHHHHHHHHhCC---eecCCCCHHHEEECCCCCEEECccCccccccCcc---cCCCccccccccCc
Confidence            45899999999999999999999999   9999999999999999999999999987654321   11224567889999


Q ss_pred             ccccCCCcccccceEehhHHHHHHHhcccCCCCcCCCcccc-cccccC------------CCccccCccccCC---cCHH
Q 041793           85 EYASDGKFSVKSDVFSFGILLLEIISGKKNRGFYHSDNKLN-LIGHVS------------MPSQLIDPCIQGS---FNLV  148 (224)
Q Consensus        85 E~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~-~~~~~~------------~~~~~~~~~~~~~---~~~~  148 (224)
                      |.+.+..++.++|+|||||++++|++|.+||.......... ......            .+.....+.....   ....
T Consensus       177 E~~~~~~~~~~~DiwslG~~l~~l~~g~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  256 (288)
T cd07863         177 EVLLQSTYATPVDMWSVGCIFAEMFRRKPLFCGNSEADQLGKIFDLIGLPPEDDWPRDVTLPRGAFSPRGPRPVQSVVPE  256 (288)
T ss_pred             hHhhCCCCCCcchhhhHHHHHHHHHhCCcCcCCCCHHHHHHHHHHHhCCCChhhCcccccccccccCCCCCCchHHhCcC
Confidence            99988889999999999999999999999985433221110 000000            0000000000000   0000


Q ss_pred             HHHHHHHHHHHhccCCCCCCCChHHHHH
Q 041793          149 EVIRCIHIGLLCVQQHPKDRPSMPSVIL  176 (224)
Q Consensus       149 ~~~~~~~li~~cl~~dp~~Rps~~~v~~  176 (224)
                      ....+.+++.+||+.||++|||+.+++.
T Consensus       257 ~~~~~~~li~~~L~~dP~~R~t~~~~l~  284 (288)
T cd07863         257 IEESGAQLLLEMLTFNPHKRISAFRALQ  284 (288)
T ss_pred             cCHHHHHHHHHHhccCcccCCCHHHHhc
Confidence            1134678999999999999999999974


No 93 
>cd05573 STKc_ROCK_NDR_like Catalytic domain of ROCK- and NDR kinase-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Rho-associated coiled-coil containing protein kinase (ROCK) and Nuclear Dbf2-Related (NDR)-like kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK- and NDR-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include ROCK and ROCK-like proteins such as DMPK, MRCK, and CRIK, as well as NDR and NDR-like proteins such as LATS, CBK1 and Sid2p. ROCK and CRIK are effectors of the small GTPase Rho, while MRCK is an effector of the small GTPase Cdc42. NDR and NDR-like kinases contain an N-terminal regulatory (NTR) domain and an insert within the 
Probab=99.95  E-value=1.8e-28  Score=201.53  Aligned_cols=162  Identities=22%  Similarity=0.287  Sum_probs=122.1

Q ss_pred             CCCChHHHHHHHHHHHHHHhhhhcCCCCceEecCCCCCceEECCCCCceEeeecceeecCCCC-----------------
Q 041793            5 KILDWPKRFHIICGTARGVMYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDE-----------------   67 (224)
Q Consensus         5 ~~l~~~~~~~i~~qi~~~l~~Lh~~~~~~i~H~dl~~~nil~~~~~~~kl~df~~~~~~~~~~-----------------   67 (224)
                      +.+++..++.++.||+.||.|||+.|   |+||||||+||+++.++.++|+|||++.......                 
T Consensus        96 ~~l~~~~~~~i~~qi~~aL~~LH~~g---iiH~Dlkp~NIll~~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~~~~~~~~  172 (350)
T cd05573          96 DVFPEETARFYIAELVLALDSVHKLG---FIHRDIKPDNILIDADGHIKLADFGLCKKMNKAKDREYYLNDSHNLLFRDN  172 (350)
T ss_pred             CCCCHHHHHHHHHHHHHHHHHHHHCC---eeccCCCHHHeEECCCCCEEeecCCCCccCcccCccccccccccccccccc
Confidence            57899999999999999999999999   9999999999999999999999999987654322                 


Q ss_pred             ----------CCCcccccccccccCCcccccCCCcccccceEehhHHHHHHHhcccCCCCcCCCcccccccccCCCcccc
Q 041793           68 ----------IEGNTNRVIGTYGYMAPEYASDGKFSVKSDVFSFGILLLEIISGKKNRGFYHSDNKLNLIGHVSMPSQLI  137 (224)
Q Consensus        68 ----------~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~  137 (224)
                                .........|+..|+|||.+.+..++.++|||||||++|+|++|+.||...........+.........+
T Consensus       173 ~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~ell~g~~Pf~~~~~~~~~~~i~~~~~~~~~p  252 (350)
T cd05573         173 VLVRRRDHKQRRVRANSTVGTPDYIAPEVLRGTPYGLECDWWSLGVILYEMLYGFPPFYSDTLQETYNKIINWKESLRFP  252 (350)
T ss_pred             ccccccccccccccccccccCccccCHHHHcCCCCCCceeeEecchhhhhhccCCCCCCCCCHHHHHHHHhccCCcccCC
Confidence                      0011223467889999999999899999999999999999999999986544222211111100000110


Q ss_pred             CccccCCcCHHHHHHHHHHHHHhccCCCCCCCC-hHHHHHH
Q 041793          138 DPCIQGSFNLVEVIRCIHIGLLCVQQHPKDRPS-MPSVILM  177 (224)
Q Consensus       138 ~~~~~~~~~~~~~~~~~~li~~cl~~dp~~Rps-~~~v~~~  177 (224)
                      . .  ...    ...+.+++.+||. ||.+||+ ++++++.
T Consensus       253 ~-~--~~~----~~~~~~li~~ll~-dp~~R~~s~~~ll~h  285 (350)
T cd05573         253 P-D--PPV----SPEAIDLICRLLC-DPEDRLGSFEEIKSH  285 (350)
T ss_pred             C-C--CCC----CHHHHHHHHHHcc-ChhhcCCCHHHHhcC
Confidence            0 0  001    1346678889997 9999999 9999874


No 94 
>KOG0599 consensus Phosphorylase kinase gamma subunit [Carbohydrate transport and metabolism]
Probab=99.95  E-value=6.5e-29  Score=189.27  Aligned_cols=159  Identities=30%  Similarity=0.401  Sum_probs=122.1

Q ss_pred             CCCCChHHHHHHHHHHHHHHhhhhcCCCCceEecCCCCCceEECCCCCceEeeecceeecCCCCCCCcccccccccccCC
Q 041793            4 CKILDWPKRFHIICGTARGVMYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDEIEGNTNRVIGTYGYMA   83 (224)
Q Consensus         4 ~~~l~~~~~~~i~~qi~~~l~~Lh~~~~~~i~H~dl~~~nil~~~~~~~kl~df~~~~~~~~~~~~~~~~~~~~~~~y~a   83 (224)
                      .-.|++....+|+.|+.+|++|||.++   |+||||||+||+++.+.+++++|||+++....+.   .....-||++|+|
T Consensus       117 ~VtlSEK~tR~iMrqlfegVeylHa~~---IVHRDLKpENILlddn~~i~isDFGFa~~l~~Ge---kLrelCGTPgYLA  190 (411)
T KOG0599|consen  117 KVTLSEKETRRIMRQLFEGVEYLHARN---IVHRDLKPENILLDDNMNIKISDFGFACQLEPGE---KLRELCGTPGYLA  190 (411)
T ss_pred             heeecHHHHHHHHHHHHHHHHHHHHhh---hhhcccChhheeeccccceEEeccceeeccCCch---hHHHhcCCCcccC
Confidence            346788899999999999999999999   9999999999999999999999999999876543   1223468999999


Q ss_pred             cccccC------CCcccccceEehhHHHHHHHhcccCCCCcCCCccccc--ccccCCCccccCccccCCcCHHHHHHHHH
Q 041793           84 PEYASD------GKFSVKSDVFSFGILLLEIISGKKNRGFYHSDNKLNL--IGHVSMPSQLIDPCIQGSFNLVEVIRCIH  155 (224)
Q Consensus        84 PE~~~~------~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  155 (224)
                      ||.++.      .+|+...|+|++|+++|.++.|.+||  |+..+...+  +....  .+...+.+   .+  ......+
T Consensus       191 PEtikC~m~e~~pGYs~EVD~Wa~GVImyTLLaGcpPF--wHRkQmlMLR~ImeGk--yqF~speW---ad--is~~~Kd  261 (411)
T KOG0599|consen  191 PETIKCSMYENHPGYSKEVDEWACGVIMYTLLAGCPPF--WHRKQMLMLRMIMEGK--YQFRSPEW---AD--ISATVKD  261 (411)
T ss_pred             hhheeeecccCCCCccchhhHHHHHHHHHHHHcCCCch--hHHHHHHHHHHHHhcc--cccCCcch---hh--ccccHHH
Confidence            999863      45788999999999999999999997  443322211  11111  11111111   11  1234568


Q ss_pred             HHHHhccCCCCCCCChHHHHHH
Q 041793          156 IGLLCVQQHPKDRPSMPSVILM  177 (224)
Q Consensus       156 li~~cl~~dp~~Rps~~~v~~~  177 (224)
                      ||.+||+.||.+|.|++|+++.
T Consensus       262 LIsrlLqVdp~~Ritake~LaH  283 (411)
T KOG0599|consen  262 LISRLLQVDPTKRITAKEALAH  283 (411)
T ss_pred             HHHHHHeeCchhcccHHHHhcC
Confidence            8899999999999999999873


No 95 
>cd05043 PTK_Ryk Pseudokinase domain of Ryk (Receptor related to tyrosine kinase). Protein Tyrosine Kinase (PTK) family; Receptor related to tyrosine kinase (Ryk); pseudokinase domain. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ryk is a receptor tyr kinase (RTK) containing an extracellular region with two leucine-rich motifs, a transmembrane segment, and an intracellular inactive pseudokinase domain. The extracellular region of Ryk shows homology to the N-terminal domain of Wnt inhibitory factor-1 (WIF) and serves as the ligand (Wnt) binding domain of Ryk. Ryk is expressed in many different tissues both during development and in adults, suggesting a widespread function. It 
Probab=99.95  E-value=3.1e-28  Score=194.09  Aligned_cols=164  Identities=24%  Similarity=0.339  Sum_probs=123.9

Q ss_pred             CCCChHHHHHHHHHHHHHHhhhhcCCCCceEecCCCCCceEECCCCCceEeeecceeecCCCCCCCcccccccccccCCc
Q 041793            5 KILDWPKRFHIICGTARGVMYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDEIEGNTNRVIGTYGYMAP   84 (224)
Q Consensus         5 ~~l~~~~~~~i~~qi~~~l~~Lh~~~~~~i~H~dl~~~nil~~~~~~~kl~df~~~~~~~~~~~~~~~~~~~~~~~y~aP   84 (224)
                      ..+++.+++.++.||+.||.|||+.+   ++|+||+|+||+++.++.++++|||+++.+.............++..|+||
T Consensus       112 ~~l~~~~~~~i~~~i~~~l~~LH~~~---i~H~di~p~nil~~~~~~~kl~d~g~~~~~~~~~~~~~~~~~~~~~~y~ap  188 (280)
T cd05043         112 QALSTQQLVHMAIQIACGMSYLHKRG---VIHKDIAARNCVIDEELQVKITDNALSRDLFPMDYHCLGDNENRPVKWMAL  188 (280)
T ss_pred             cCCCHHHHHHHHHHHHHHHHHHHHCC---EeecccCHhhEEEcCCCcEEECCCCCcccccCCceEEeCCCCCcchhccCH
Confidence            56899999999999999999999999   999999999999999999999999999765332211111112345679999


Q ss_pred             ccccCCCcccccceEehhHHHHHHHh-cccCCCCcCCCcccccccccCCCccccCccccCCcCHHHHHHHHHHHHHhccC
Q 041793           85 EYASDGKFSVKSDVFSFGILLLEIIS-GKKNRGFYHSDNKLNLIGHVSMPSQLIDPCIQGSFNLVEVIRCIHIGLLCVQQ  163 (224)
Q Consensus        85 E~~~~~~~~~~~Di~slG~il~~l~~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~  163 (224)
                      |.+.+..++.++||||||+++|++++ |+.||..............   ......   ....    ...+.+++.+||..
T Consensus       189 E~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~~~~~~~~~---~~~~~~---~~~~----~~~~~~li~~~l~~  258 (280)
T cd05043         189 ESLVNKEYSSASDVWSFGVLLWELMTLGQTPYVEIDPFEMAAYLKD---GYRLAQ---PINC----PDELFAVMACCWAL  258 (280)
T ss_pred             HHHhcCCCCchhhHHHhHHHHHHHhcCCCCCcCcCCHHHHHHHHHc---CCCCCC---CCcC----CHHHHHHHHHHcCC
Confidence            99988888999999999999999998 9999754332221111111   111100   0111    12467899999999


Q ss_pred             CCCCCCChHHHHHHhccC
Q 041793          164 HPKDRPSMPSVILMLGSE  181 (224)
Q Consensus       164 dp~~Rps~~~v~~~L~~~  181 (224)
                      ||++|||+.++++.|+..
T Consensus       259 ~p~~Rps~~~~~~~l~~~  276 (280)
T cd05043         259 DPEERPSFSQLVQCLTDF  276 (280)
T ss_pred             ChhhCCCHHHHHHHHHHH
Confidence            999999999999999764


No 96 
>KOG0616 consensus cAMP-dependent protein kinase catalytic subunit (PKA) [Signal transduction mechanisms]
Probab=99.95  E-value=1.5e-28  Score=188.71  Aligned_cols=147  Identities=24%  Similarity=0.315  Sum_probs=119.1

Q ss_pred             CCCCCChHHHHHHHHHHHHHHhhhhcCCCCceEecCCCCCceEECCCCCceEeeecceeecCCCCCCCcccccccccccC
Q 041793            3 RCKILDWPKRFHIICGTARGVMYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDEIEGNTNRVIGTYGYM   82 (224)
Q Consensus         3 ~~~~l~~~~~~~i~~qi~~~l~~Lh~~~~~~i~H~dl~~~nil~~~~~~~kl~df~~~~~~~~~~~~~~~~~~~~~~~y~   82 (224)
                      +.++|++.....++.||+.||+|||+.+   |++|||||+||++|.+|.+|++|||++......     ..+.-||+.|+
T Consensus       137 k~~rF~e~~arFYAAeivlAleylH~~~---iiYRDLKPENiLlD~~G~iKitDFGFAK~v~~r-----T~TlCGTPeYL  208 (355)
T KOG0616|consen  137 KSGRFSEPHARFYAAEIVLALEYLHSLD---IIYRDLKPENLLLDQNGHIKITDFGFAKRVSGR-----TWTLCGTPEYL  208 (355)
T ss_pred             hcCCCCchhHHHHHHHHHHHHHHHHhcC---eeeccCChHHeeeccCCcEEEEeccceEEecCc-----EEEecCCcccc
Confidence            5678999999999999999999999999   999999999999999999999999999886433     44567899999


Q ss_pred             CcccccCCCcccccceEehhHHHHHHHhcccCCCCcCCCcccccccccCCCccccCccccCCcCHHHHHHHHHHHHHhcc
Q 041793           83 APEYASDGKFSVKSDVFSFGILLLEIISGKKNRGFYHSDNKLNLIGHVSMPSQLIDPCIQGSFNLVEVIRCIHIGLLCVQ  162 (224)
Q Consensus        83 aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~  162 (224)
                      |||++...++..++|.||||+++|||+.|.+||......   .+...+....-.++...    +    ..+.+|+...|+
T Consensus       209 APEii~sk~ynkavDWWalGVLIYEMlaG~pPF~~~~~~---~iY~KI~~~~v~fP~~f----s----~~~kdLl~~LL~  277 (355)
T KOG0616|consen  209 APEIIQSKGYNKAVDWWALGVLIYEMLAGYPPFYDDNPI---QIYEKILEGKVKFPSYF----S----SDAKDLLKKLLQ  277 (355)
T ss_pred             ChHHhhcCCCCcchhHHHHHHHHHHHHcCCCCCcCCChH---HHHHHHHhCcccCCccc----C----HHHHHHHHHHHh
Confidence            999999999999999999999999999999998655542   22222221111111111    1    235678889999


Q ss_pred             CCCCCC
Q 041793          163 QHPKDR  168 (224)
Q Consensus       163 ~dp~~R  168 (224)
                      .|-.+|
T Consensus       278 vD~t~R  283 (355)
T KOG0616|consen  278 VDLTKR  283 (355)
T ss_pred             hhhHhh
Confidence            999999


No 97 
>cd05591 STKc_nPKC_epsilon Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C epsilon. Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), epsilon isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-epsilon has been shown to behave as an oncoprotein. Its overexpression contributes to
Probab=99.95  E-value=3.6e-28  Score=197.67  Aligned_cols=158  Identities=22%  Similarity=0.349  Sum_probs=121.1

Q ss_pred             CCCCChHHHHHHHHHHHHHHhhhhcCCCCceEecCCCCCceEECCCCCceEeeecceeecCCCCCCCcccccccccccCC
Q 041793            4 CKILDWPKRFHIICGTARGVMYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDEIEGNTNRVIGTYGYMA   83 (224)
Q Consensus         4 ~~~l~~~~~~~i~~qi~~~l~~Lh~~~~~~i~H~dl~~~nil~~~~~~~kl~df~~~~~~~~~~~~~~~~~~~~~~~y~a   83 (224)
                      .+.+++..+..++.||+.||.|||+.|   |+||||||+||+++.++.++|+|||++.......  .......++..|+|
T Consensus        90 ~~~~~~~~~~~~~~qi~~aL~~LH~~~---ivHrDikp~Nill~~~~~~kL~Dfg~~~~~~~~~--~~~~~~~gt~~y~a  164 (321)
T cd05591          90 SRKFDEPRSRFYAAEVTLALMFLHRHG---VIYRDLKLDNILLDAEGHCKLADFGMCKEGILNG--VTTTTFCGTPDYIA  164 (321)
T ss_pred             cCCCCHHHHHHHHHHHHHHHHHHHHCC---eeccCCCHHHeEECCCCCEEEeecccceecccCC--ccccccccCccccC
Confidence            457899999999999999999999999   9999999999999999999999999987543221  11223457889999


Q ss_pred             cccccCCCcccccceEehhHHHHHHHhcccCCCCcCCCcccccccccCCCccccCccccCCcCHHHHHHHHHHHHHhccC
Q 041793           84 PEYASDGKFSVKSDVFSFGILLLEIISGKKNRGFYHSDNKLNLIGHVSMPSQLIDPCIQGSFNLVEVIRCIHIGLLCVQQ  163 (224)
Q Consensus        84 PE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~  163 (224)
                      ||.+.+..++.++|+|||||++|+|++|+.||..........   .+.......    +...+    ..+.+++.+||+.
T Consensus       165 PE~~~~~~~~~~~DvwslG~il~el~tg~~Pf~~~~~~~~~~---~i~~~~~~~----p~~~~----~~~~~ll~~~L~~  233 (321)
T cd05591         165 PEILQELEYGPSVDWWALGVLMYEMMAGQPPFEADNEDDLFE---SILHDDVLY----PVWLS----KEAVSILKAFMTK  233 (321)
T ss_pred             HHHHcCCCCCCccceechhHHHHHHhcCCCCCCCCCHHHHHH---HHHcCCCCC----CCCCC----HHHHHHHHHHhcc
Confidence            999988889999999999999999999999986543222211   111111100    01111    3467889999999


Q ss_pred             CCCCCC-------ChHHHHHH
Q 041793          164 HPKDRP-------SMPSVILM  177 (224)
Q Consensus       164 dp~~Rp-------s~~~v~~~  177 (224)
                      ||++||       +++++++.
T Consensus       234 dp~~R~~~~~~~~~~~~~~~h  254 (321)
T cd05591         234 NPNKRLGCVASQGGEDAIKQH  254 (321)
T ss_pred             CHHHcCCCCCCCCCHHHHhcC
Confidence            999999       77888754


No 98 
>cd06649 PKc_MEK2 Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase 2. Protein kinases (PKs), MAP/ERK Kinase (MEK) 2 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK2 is a dual-specificity PK that phosphorylates and activates the downst
Probab=99.95  E-value=3.8e-28  Score=198.37  Aligned_cols=107  Identities=31%  Similarity=0.496  Sum_probs=93.8

Q ss_pred             CCCCChHHHHHHHHHHHHHHhhhhcC-CCCceEecCCCCCceEECCCCCceEeeecceeecCCCCCCCcccccccccccC
Q 041793            4 CKILDWPKRFHIICGTARGVMYLHQD-SRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDEIEGNTNRVIGTYGYM   82 (224)
Q Consensus         4 ~~~l~~~~~~~i~~qi~~~l~~Lh~~-~~~~i~H~dl~~~nil~~~~~~~kl~df~~~~~~~~~~~~~~~~~~~~~~~y~   82 (224)
                      .+.+++..+..++.|++.||.|||+. +   |+|+||||+||+++.++.++|+|||++.......    .....++..|+
T Consensus        97 ~~~~~~~~~~~~~~~i~~~l~~lH~~~~---ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~----~~~~~g~~~y~  169 (331)
T cd06649          97 AKRIPEEILGKVSIAVLRGLAYLREKHQ---IMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSM----ANSFVGTRSYM  169 (331)
T ss_pred             cCCCCHHHHHHHHHHHHHHHHHHhhcCC---EEcCCCChhhEEEcCCCcEEEccCcccccccccc----cccCCCCcCcC
Confidence            35688999999999999999999986 5   9999999999999999999999999987653221    22346788999


Q ss_pred             CcccccCCCcccccceEehhHHHHHHHhcccCCCC
Q 041793           83 APEYASDGKFSVKSDVFSFGILLLEIISGKKNRGF  117 (224)
Q Consensus        83 aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~  117 (224)
                      |||.+.+..++.++|+|||||++|+|++|+.||..
T Consensus       170 aPE~~~~~~~~~~~DiwslG~il~el~tg~~p~~~  204 (331)
T cd06649         170 SPERLQGTHYSVQSDIWSMGLSLVELAIGRYPIPP  204 (331)
T ss_pred             CHhHhcCCCCCchHhHHHHHHHHHHHHhCCCCCCC
Confidence            99999988899999999999999999999999854


No 99 
>cd07867 STKc_CDC2L6 Catalytic domain of Serine/Threonine Kinase, Cell Division Cycle 2-like 6. Serine/Threonine Kinases (STKs), Cell Division Cycle 2-like 6 (CDC2L6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDC2L6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDC2L6 is also called CDK8-like and was previously referred to as CDK11. However, this is a confusing nomenclature as CDC2L6 is distinct from CDC2L1, which is represented by the two protein products from its gene, called CDK11(p110) and CDK11(p58), as well as
Probab=99.95  E-value=3.2e-28  Score=197.28  Aligned_cols=111  Identities=25%  Similarity=0.427  Sum_probs=92.5

Q ss_pred             CCCChHHHHHHHHHHHHHHhhhhcCCCCceEecCCCCCceEE----CCCCCceEeeecceeecCCCCCC-Cccccccccc
Q 041793            5 KILDWPKRFHIICGTARGVMYLHQDSRLRIIHRDLKASNVLL----DQDMNPKISDFGLARAFGGDEIE-GNTNRVIGTY   79 (224)
Q Consensus         5 ~~l~~~~~~~i~~qi~~~l~~Lh~~~~~~i~H~dl~~~nil~----~~~~~~kl~df~~~~~~~~~~~~-~~~~~~~~~~   79 (224)
                      ..+++..++.++.||+.||.|||+.+   |+||||||+||++    +.++.++|+|||++......... .......++.
T Consensus       103 ~~l~~~~~~~i~~qi~~aL~~lH~~~---ivH~Dlkp~Nil~~~~~~~~~~~kl~DfG~a~~~~~~~~~~~~~~~~~~t~  179 (317)
T cd07867         103 MQLPRSMVKSLLYQILDGIHYLHANW---VLHRDLKPANILVMGEGPERGRVKIADMGFARLFNSPLKPLADLDPVVVTF  179 (317)
T ss_pred             ccCCHHHHHHHHHHHHHHHHHHHhCC---EEcCCCCHHHEEEccCCCCCCcEEEeeccceeccCCCcccccccCcceecc
Confidence            46889999999999999999999999   9999999999999    56678999999999876433211 1122346688


Q ss_pred             ccCCcccccCC-CcccccceEehhHHHHHHHhcccCCCCc
Q 041793           80 GYMAPEYASDG-KFSVKSDVFSFGILLLEIISGKKNRGFY  118 (224)
Q Consensus        80 ~y~aPE~~~~~-~~~~~~Di~slG~il~~l~~g~~p~~~~  118 (224)
                      .|+|||.+.+. .++.++|||||||++|+|++|+.||...
T Consensus       180 ~y~aPE~~~~~~~~~~~~DiwSlG~il~el~tg~~~f~~~  219 (317)
T cd07867         180 WYRAPELLLGARHYTKAIDIWAIGCIFAELLTSEPIFHCR  219 (317)
T ss_pred             cccCcHHhcCCCccCcHHHHHhHHHHHHHHHhCCCCcccc
Confidence            99999998764 4789999999999999999999998643


No 100
>KOG0595 consensus Serine/threonine-protein kinase involved in autophagy [Posttranslational modification, protein turnover, chaperones; Intracellular trafficking, secretion, and vesicular transport; Signal transduction mechanisms]
Probab=99.95  E-value=3.4e-28  Score=193.84  Aligned_cols=113  Identities=32%  Similarity=0.476  Sum_probs=99.4

Q ss_pred             CCCCCChHHHHHHHHHHHHHHhhhhcCCCCceEecCCCCCceEECCC------CCceEeeecceeecCCCCCCCcccccc
Q 041793            3 RCKILDWPKRFHIICGTARGVMYLHQDSRLRIIHRDLKASNVLLDQD------MNPKISDFGLARAFGGDEIEGNTNRVI   76 (224)
Q Consensus         3 ~~~~l~~~~~~~i~~qi~~~l~~Lh~~~~~~i~H~dl~~~nil~~~~------~~~kl~df~~~~~~~~~~~~~~~~~~~   76 (224)
                      +++.|++.+...++.||+.||++||+++   |+||||||+|||+...      ..+|++|||+++.+....   ...+.-
T Consensus       102 ~~~~l~e~t~r~Fm~QLA~alq~L~~~~---IiHRDLKPQNiLLs~~~~~~~~~~LKIADFGfAR~L~~~~---~a~tlc  175 (429)
T KOG0595|consen  102 RRGRLPEATARHFMQQLASALQFLHENN---IIHRDLKPQNILLSTTARNDTSPVLKIADFGFARFLQPGS---MAETLC  175 (429)
T ss_pred             HcCCCCHHHHHHHHHHHHHHHHHHHHCC---eeeccCCcceEEeccCCCCCCCceEEecccchhhhCCchh---HHHHhh
Confidence            4568999999999999999999999999   9999999999999764      557999999999876432   334467


Q ss_pred             cccccCCcccccCCCcccccceEehhHHHHHHHhcccCCCCcCCC
Q 041793           77 GTYGYMAPEYASDGKFSVKSDVFSFGILLLEIISGKKNRGFYHSD  121 (224)
Q Consensus        77 ~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~  121 (224)
                      |++.|+|||++....|+.|+|+||+|+++|++++|+.||......
T Consensus       176 GSplYMAPEV~~~~~YdAKADLWSiG~Ilyq~l~g~~Pf~a~t~~  220 (429)
T KOG0595|consen  176 GSPLYMAPEVIMSQQYDAKADLWSIGTILYQCLTGKPPFDAETPK  220 (429)
T ss_pred             CCccccCHHHHHhccccchhhHHHHHHHHHHHHhCCCCccccCHH
Confidence            899999999999999999999999999999999999998754433


No 101
>cd07874 STKc_JNK3 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 3. Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 3 (JNK3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK3 is expressed primarily in the brain, and to a lesser extent in the heart and testis. Mice deficient in Jnk3 are protected against kainic acid-induced seizures, strok
Probab=99.95  E-value=3.6e-28  Score=200.25  Aligned_cols=166  Identities=25%  Similarity=0.303  Sum_probs=120.9

Q ss_pred             CCChHHHHHHHHHHHHHHhhhhcCCCCceEecCCCCCceEECCCCCceEeeecceeecCCCCCCCcccccccccccCCcc
Q 041793            6 ILDWPKRFHIICGTARGVMYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDEIEGNTNRVIGTYGYMAPE   85 (224)
Q Consensus         6 ~l~~~~~~~i~~qi~~~l~~Lh~~~~~~i~H~dl~~~nil~~~~~~~kl~df~~~~~~~~~~~~~~~~~~~~~~~y~aPE   85 (224)
                      .+++.++..++.||+.||.|||+.|   |+||||||+||+++.++.++|+|||++.......   ......++..|+|||
T Consensus       115 ~l~~~~~~~~~~qi~~aL~~LH~~g---ivHrDikp~Nill~~~~~~kl~Dfg~~~~~~~~~---~~~~~~~t~~y~aPE  188 (355)
T cd07874         115 ELDHERMSYLLYQMLCGIKHLHSAG---IIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSF---MMTPYVVTRYYRAPE  188 (355)
T ss_pred             cCCHHHHHHHHHHHHHHHHHHHhCC---cccCCCChHHEEECCCCCEEEeeCcccccCCCcc---ccCCccccCCccCHH
Confidence            4788899999999999999999999   9999999999999999999999999997643221   122346788999999


Q ss_pred             cccCCCcccccceEehhHHHHHHHhcccCCCCcCCCcccc-ccccc----------------------------CCCccc
Q 041793           86 YASDGKFSVKSDVFSFGILLLEIISGKKNRGFYHSDNKLN-LIGHV----------------------------SMPSQL  136 (224)
Q Consensus        86 ~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~-~~~~~----------------------------~~~~~~  136 (224)
                      .+.+..++.++|+|||||++|+|++|+.||.......... .+...                            ..+...
T Consensus       189 ~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  268 (355)
T cd07874         189 VILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQPTVRNYVENRPKYAGLTFPKLF  268 (355)
T ss_pred             HHcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCHHHHHhhcHHHHHHHhcCCccccccchhhc
Confidence            9988889999999999999999999999986433111100 00000                            000000


Q ss_pred             cCcccc--CCcCHHHHHHHHHHHHHhccCCCCCCCChHHHHHH
Q 041793          137 IDPCIQ--GSFNLVEVIRCIHIGLLCVQQHPKDRPSMPSVILM  177 (224)
Q Consensus       137 ~~~~~~--~~~~~~~~~~~~~li~~cl~~dp~~Rps~~~v~~~  177 (224)
                      .+....  ..........+.+|+.+||+.||++|||+.++++.
T Consensus       269 ~~~~~~~~~~~~~~~~~~~~~li~~mL~~dP~~Rps~~ell~h  311 (355)
T cd07874         269 PDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVDEALQH  311 (355)
T ss_pred             cccccccccccccccchHHHHHHHHHhcCCchhcCCHHHHhcC
Confidence            000000  00011112356789999999999999999999874


No 102
>cd07875 STKc_JNK1 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 1. Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 1 (JNK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK1, like JNK2, is expressed in every cell and tissue type. Initially it was thought that JNK1 and JNK2 were functionally redundant as mice deficient in either genes (Jn
Probab=99.95  E-value=2.1e-28  Score=202.36  Aligned_cols=166  Identities=25%  Similarity=0.303  Sum_probs=120.9

Q ss_pred             CCChHHHHHHHHHHHHHHhhhhcCCCCceEecCCCCCceEECCCCCceEeeecceeecCCCCCCCcccccccccccCCcc
Q 041793            6 ILDWPKRFHIICGTARGVMYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDEIEGNTNRVIGTYGYMAPE   85 (224)
Q Consensus         6 ~l~~~~~~~i~~qi~~~l~~Lh~~~~~~i~H~dl~~~nil~~~~~~~kl~df~~~~~~~~~~~~~~~~~~~~~~~y~aPE   85 (224)
                      .+++.+++.++.|++.||.|||+.|   |+||||||+||+++.++.++|+|||++.......   ......++..|+|||
T Consensus       122 ~~~~~~~~~~~~qi~~aL~~LH~~~---ivH~Dlkp~NIll~~~~~~kL~DfG~a~~~~~~~---~~~~~~~t~~y~aPE  195 (364)
T cd07875         122 ELDHERMSYLLYQMLCGIKHLHSAG---IIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSF---MMTPYVVTRYYRAPE  195 (364)
T ss_pred             cCCHHHHHHHHHHHHHHHHHHhhCC---eecCCCCHHHEEECCCCcEEEEeCCCccccCCCC---cccCCcccCCcCCHH
Confidence            4788899999999999999999999   9999999999999999999999999997643221   122346788999999


Q ss_pred             cccCCCcccccceEehhHHHHHHHhcccCCCCcCCCcccccc-cccCCC-----------------------c----ccc
Q 041793           86 YASDGKFSVKSDVFSFGILLLEIISGKKNRGFYHSDNKLNLI-GHVSMP-----------------------S----QLI  137 (224)
Q Consensus        86 ~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~-~~~~~~-----------------------~----~~~  137 (224)
                      .+.+..++.++|||||||++|+|++|+.||...........+ .....+                       .    ...
T Consensus       196 ~~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  275 (364)
T cd07875         196 VILGMGYKENVDIWSVGCIMGEMIKGGVLFPGTDHIDQWNKVIEQLGTPCPEFMKKLQPTVRTYVENRPKYAGYSFEKLF  275 (364)
T ss_pred             HHhCCCCCchhhHHhHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCCCCHHHHHhhhHHHHHHHhhCCCcCCCChHhhC
Confidence            999989999999999999999999999998654322111100 000000                       0    000


Q ss_pred             -Cccc--cCCcCHHHHHHHHHHHHHhccCCCCCCCChHHHHHH
Q 041793          138 -DPCI--QGSFNLVEVIRCIHIGLLCVQQHPKDRPSMPSVILM  177 (224)
Q Consensus       138 -~~~~--~~~~~~~~~~~~~~li~~cl~~dp~~Rps~~~v~~~  177 (224)
                       +...  ...........+.+|+.+||+.||++|||+.++++.
T Consensus       276 ~~~~~~~~~~~~~~~~~~~~dll~~mL~~dP~~R~t~~e~L~h  318 (364)
T cd07875         276 PDVLFPADSEHNKLKASQARDLLSKMLVIDASKRISVDEALQH  318 (364)
T ss_pred             ccccccccccccccccHHHHHHHHHhcCcCcccCCCHHHHhcC
Confidence             0000  000011112356789999999999999999999774


No 103
>cd05590 STKc_nPKC_eta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C eta. Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), eta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-eta is predominantly expressed in squamous epithelia, where it plays a crucial role in the signal
Probab=99.95  E-value=3.6e-28  Score=197.63  Aligned_cols=152  Identities=24%  Similarity=0.350  Sum_probs=117.4

Q ss_pred             CCCCChHHHHHHHHHHHHHHhhhhcCCCCceEecCCCCCceEECCCCCceEeeecceeecCCCCCCCcccccccccccCC
Q 041793            4 CKILDWPKRFHIICGTARGVMYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDEIEGNTNRVIGTYGYMA   83 (224)
Q Consensus         4 ~~~l~~~~~~~i~~qi~~~l~~Lh~~~~~~i~H~dl~~~nil~~~~~~~kl~df~~~~~~~~~~~~~~~~~~~~~~~y~a   83 (224)
                      .+.+++..++.++.||+.||.|||+.+   ++||||||+||+++.++.++|+|||++.......  .......|++.|+|
T Consensus        90 ~~~l~~~~~~~~~~ql~~~L~~lH~~~---ivH~dlkp~NIli~~~~~~kL~DfG~~~~~~~~~--~~~~~~~gt~~y~a  164 (320)
T cd05590          90 SRRFDEARARFYAAEITSALMFLHDKG---IIYRDLKLDNVLLDHEGHCKLADFGMCKEGIFNG--KTTSTFCGTPDYIA  164 (320)
T ss_pred             cCCCCHHHHHHHHHHHHHHHHHHHHCC---eEeCCCCHHHeEECCCCcEEEeeCCCCeecCcCC--CcccccccCccccC
Confidence            467899999999999999999999999   9999999999999999999999999987532211  11233467889999


Q ss_pred             cccccCCCcccccceEehhHHHHHHHhcccCCCCcCCCcccccccccCCCccccCccccCCcCHHHHHHHHHHHHHhccC
Q 041793           84 PEYASDGKFSVKSDVFSFGILLLEIISGKKNRGFYHSDNKLNLIGHVSMPSQLIDPCIQGSFNLVEVIRCIHIGLLCVQQ  163 (224)
Q Consensus        84 PE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~  163 (224)
                      ||.+.+..++.++|+|||||++|+|++|+.||...........+..   . ....   +...    ...+.+++.+||+.
T Consensus       165 PE~~~~~~~~~~~DiwslG~il~el~~g~~Pf~~~~~~~~~~~i~~---~-~~~~---~~~~----~~~~~~li~~~L~~  233 (320)
T cd05590         165 PEILQEMLYGPSVDWWAMGVLLYEMLCGHAPFEAENEDDLFEAILN---D-EVVY---PTWL----SQDAVDILKAFMTK  233 (320)
T ss_pred             HHHHcCCCCCCccchhhhHHHHHHHhhCCCCCCCCCHHHHHHHHhc---C-CCCC---CCCC----CHHHHHHHHHHccc
Confidence            9999888899999999999999999999999865433222111111   0 0000   1111    12467888999999


Q ss_pred             CCCCCCCh
Q 041793          164 HPKDRPSM  171 (224)
Q Consensus       164 dp~~Rps~  171 (224)
                      ||++||++
T Consensus       234 dP~~R~~~  241 (320)
T cd05590         234 NPTMRLGS  241 (320)
T ss_pred             CHHHCCCC
Confidence            99999998


No 104
>cd07869 STKc_PFTAIRE1 Catalytic domain of the Serine/Threonine Kinase, PFTAIRE-1 kinase. Serine/Threonine Kinases (STKs), PFTAIRE-1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PFTAIRE-1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PFTAIRE-1 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PFTAIRE-1 is widely expressed except in the spleen and thymus. It is highly expressed in the brain, heart, pancreas, testis, and ovary, and is localized in the cytoplasm. It is regulated by cyclin D3 an
Probab=99.95  E-value=2.1e-28  Score=197.45  Aligned_cols=168  Identities=24%  Similarity=0.275  Sum_probs=118.3

Q ss_pred             CCCCChHHHHHHHHHHHHHHhhhhcCCCCceEecCCCCCceEECCCCCceEeeecceeecCCCCCCCcccccccccccCC
Q 041793            4 CKILDWPKRFHIICGTARGVMYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDEIEGNTNRVIGTYGYMA   83 (224)
Q Consensus         4 ~~~l~~~~~~~i~~qi~~~l~~Lh~~~~~~i~H~dl~~~nil~~~~~~~kl~df~~~~~~~~~~~~~~~~~~~~~~~y~a   83 (224)
                      .+.++...+..++.||+.||.|||+.|   |+|+||||+||+++.++.+||+|||++.......  .......++..|+|
T Consensus        97 ~~~~~~~~~~~~~~qi~~al~~lH~~~---ivH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~~--~~~~~~~~~~~y~a  171 (303)
T cd07869          97 PGGLHPENVKLFLFQLLRGLSYIHQRY---ILHRDLKPQNLLISDTGELKLADFGLARAKSVPS--HTYSNEVVTLWYRP  171 (303)
T ss_pred             CCCCCHHHHHHHHHHHHHHHHHHHHCC---eecCCCCHHHEEECCCCCEEECCCCcceeccCCC--ccCCCCcccCCCCC
Confidence            456889999999999999999999999   9999999999999999999999999987543221  11222456788999


Q ss_pred             cccccCC-CcccccceEehhHHHHHHHhcccCCCCcCCCccc--ccccccCCC------------ccccCc-cccCCcCH
Q 041793           84 PEYASDG-KFSVKSDVFSFGILLLEIISGKKNRGFYHSDNKL--NLIGHVSMP------------SQLIDP-CIQGSFNL  147 (224)
Q Consensus        84 PE~~~~~-~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~--~~~~~~~~~------------~~~~~~-~~~~~~~~  147 (224)
                      ||.+.+. .++.++|+|||||++|+|++|..||.........  ........+            ....+. ........
T Consensus       172 PE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  251 (303)
T cd07869         172 PDVLLGSTEYSTCLDMWGVGCIFVEMIQGVAAFPGMKDIQDQLERIFLVLGTPNEDTWPGVHSLPHFKPERFTLYSPKNL  251 (303)
T ss_pred             hHHHcCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCccHHHHHHHHHHHhCCCChhhccchhhccccccccccccCCccH
Confidence            9988654 4788999999999999999999998653221100  000000000            000000 00000000


Q ss_pred             H-------HHHHHHHHHHHhccCCCCCCCChHHHHH
Q 041793          148 V-------EVIRCIHIGLLCVQQHPKDRPSMPSVIL  176 (224)
Q Consensus       148 ~-------~~~~~~~li~~cl~~dp~~Rps~~~v~~  176 (224)
                      .       ....+.+|+.+||+.||++|||++++++
T Consensus       252 ~~~~~~~~~~~~~~dli~~mL~~dp~~R~s~~~~l~  287 (303)
T cd07869         252 RQAWNKLSYVNHAEDLASKLLQCFPKNRLSAQAALS  287 (303)
T ss_pred             HHHhhccCCChHHHHHHHHHhccCchhccCHHHHhc
Confidence            0       0134568999999999999999999975


No 105
>cd07876 STKc_JNK2 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 2. Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 2 (JNK2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK1, like JNK2, is expressed in every cell and tissue type. Initially it was thought that JNK1 and JNK2 were functionally redundant as mice deficient in either genes (Jn
Probab=99.95  E-value=4.3e-28  Score=200.12  Aligned_cols=167  Identities=23%  Similarity=0.281  Sum_probs=120.4

Q ss_pred             CCCChHHHHHHHHHHHHHHhhhhcCCCCceEecCCCCCceEECCCCCceEeeecceeecCCCCCCCcccccccccccCCc
Q 041793            5 KILDWPKRFHIICGTARGVMYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDEIEGNTNRVIGTYGYMAP   84 (224)
Q Consensus         5 ~~l~~~~~~~i~~qi~~~l~~Lh~~~~~~i~H~dl~~~nil~~~~~~~kl~df~~~~~~~~~~~~~~~~~~~~~~~y~aP   84 (224)
                      ..+++.++..++.||+.||.|||+.|   |+||||||+||+++.++.++|+|||++.......   ......++..|+||
T Consensus       118 ~~~~~~~~~~~~~qi~~~L~~LH~~~---ivHrDlkp~NIl~~~~~~~kl~Dfg~a~~~~~~~---~~~~~~~t~~y~aP  191 (359)
T cd07876         118 MELDHERMSYLLYQMLCGIKHLHSAG---IIHRDLKPSNIVVKSDCTLKILDFGLARTACTNF---MMTPYVVTRYYRAP  191 (359)
T ss_pred             ccCCHHHHHHHHHHHHHHHHHHHhCC---cccCCCCHHHEEECCCCCEEEecCCCccccccCc---cCCCCcccCCCCCc
Confidence            34788899999999999999999999   9999999999999999999999999987542211   12234668889999


Q ss_pred             ccccCCCcccccceEehhHHHHHHHhcccCCCCcCCCcccc-cccccC-----------------------CCccccCc-
Q 041793           85 EYASDGKFSVKSDVFSFGILLLEIISGKKNRGFYHSDNKLN-LIGHVS-----------------------MPSQLIDP-  139 (224)
Q Consensus        85 E~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~-~~~~~~-----------------------~~~~~~~~-  139 (224)
                      |.+.+..++.++|+|||||++|+|++|..||.......... ......                       ........ 
T Consensus       192 E~~~~~~~~~~~DiwSlG~il~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  271 (359)
T cd07876         192 EVILGMGYKENVDIWSVGCIMGELVKGSVIFQGTDHIDQWNKVIEQLGTPSAEFMNRLQPTVRNYVENRPQYPGISFEEL  271 (359)
T ss_pred             hhccCCCCCcchhhHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCCCcHHHHHHHHHHHHHHHhhCCCCCCcchhhh
Confidence            99999899999999999999999999999986543211100 000000                       00000000 


Q ss_pred             ----ccc--CCcCHHHHHHHHHHHHHhccCCCCCCCChHHHHHH
Q 041793          140 ----CIQ--GSFNLVEVIRCIHIGLLCVQQHPKDRPSMPSVILM  177 (224)
Q Consensus       140 ----~~~--~~~~~~~~~~~~~li~~cl~~dp~~Rps~~~v~~~  177 (224)
                          ..+  ...+......+.+|+.+||+.||++|||+.|+++.
T Consensus       272 ~~~~~~~~~~~~~~~~~~~~~~li~~mL~~dP~~R~t~~e~l~h  315 (359)
T cd07876         272 FPDWIFPSESERDKLKTSQARDLLSKMLVIDPDKRISVDEALRH  315 (359)
T ss_pred             ccccccccccccccccchhHHHHHHHHhccCcccCCCHHHHhcC
Confidence                000  00000112346789999999999999999999874


No 106
>cd05110 PTKc_HER4 Catalytic domain of the Protein Tyrosine Kinase, HER4. Protein Tyrosine Kinase (PTK) family; HER4 (ErbB4); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER4 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve as bindin
Probab=99.95  E-value=3.8e-28  Score=196.00  Aligned_cols=165  Identities=28%  Similarity=0.390  Sum_probs=125.0

Q ss_pred             CCCCChHHHHHHHHHHHHHHhhhhcCCCCceEecCCCCCceEECCCCCceEeeecceeecCCCCCCCcccccccccccCC
Q 041793            4 CKILDWPKRFHIICGTARGVMYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDEIEGNTNRVIGTYGYMA   83 (224)
Q Consensus         4 ~~~l~~~~~~~i~~qi~~~l~~Lh~~~~~~i~H~dl~~~nil~~~~~~~kl~df~~~~~~~~~~~~~~~~~~~~~~~y~a   83 (224)
                      ...+++..++.++.||+.||.|||+.+   |+|+||+|+||+++.++.+||+|||++................++..|++
T Consensus       103 ~~~~~~~~~~~~~~qi~~~L~~LH~~~---ivH~dikp~Nill~~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~~~~y~~  179 (303)
T cd05110         103 KDNIGSQLLLNWCVQIAKGMMYLEERR---LVHRDLAARNVLVKSPNHVKITDFGLARLLEGDEKEYNADGGKMPIKWMA  179 (303)
T ss_pred             ccCCCHHHHHHHHHHHHHHHHHHhhcC---eeccccccceeeecCCCceEEccccccccccCcccccccCCCccccccCC
Confidence            346889999999999999999999999   99999999999999999999999999987643222111222334568999


Q ss_pred             cccccCCCcccccceEehhHHHHHHHh-cccCCCCcCCCcccccccccCCCccccCccccCCcCHHHHHHHHHHHHHhcc
Q 041793           84 PEYASDGKFSVKSDVFSFGILLLEIIS-GKKNRGFYHSDNKLNLIGHVSMPSQLIDPCIQGSFNLVEVIRCIHIGLLCVQ  162 (224)
Q Consensus        84 PE~~~~~~~~~~~Di~slG~il~~l~~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~  162 (224)
                      ||.+.+..++.++|+||||+++|++++ |+.||...........+....   ....+   ...    ...+.+++..||.
T Consensus       180 PE~~~~~~~~~~~DiwslG~~l~el~t~g~~p~~~~~~~~~~~~~~~~~---~~~~~---~~~----~~~~~~li~~c~~  249 (303)
T cd05110         180 LECIHYRKFTHQSDVWSYGVTIWELMTFGGKPYDGIPTREIPDLLEKGE---RLPQP---PIC----TIDVYMVMVKCWM  249 (303)
T ss_pred             HHHhccCCCChHHHHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHCCC---CCCCC---CCC----CHHHHHHHHHHcC
Confidence            999988889999999999999999997 888875543222222221111   11110   111    1346788999999


Q ss_pred             CCCCCCCChHHHHHHhccC
Q 041793          163 QHPKDRPSMPSVILMLGSE  181 (224)
Q Consensus       163 ~dp~~Rps~~~v~~~L~~~  181 (224)
                      .+|++||+++++++.|+..
T Consensus       250 ~~p~~Rp~~~~l~~~l~~~  268 (303)
T cd05110         250 IDADSRPKFKELAAEFSRM  268 (303)
T ss_pred             CChhhCcCHHHHHHHHHHH
Confidence            9999999999999998765


No 107
>KOG0594 consensus Protein kinase PCTAIRE and related kinases [General function prediction only]
Probab=99.95  E-value=2.6e-28  Score=191.87  Aligned_cols=168  Identities=26%  Similarity=0.268  Sum_probs=123.0

Q ss_pred             CCCChHHHHHHHHHHHHHHhhhhcCCCCceEecCCCCCceEECCCCCceEeeecceeecCCCCCCCcccccccccccCCc
Q 041793            5 KILDWPKRFHIICGTARGVMYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDEIEGNTNRVIGTYGYMAP   84 (224)
Q Consensus         5 ~~l~~~~~~~i~~qi~~~l~~Lh~~~~~~i~H~dl~~~nil~~~~~~~kl~df~~~~~~~~~~~~~~~~~~~~~~~y~aP   84 (224)
                      ..++...+..++.||+.||+|||+++   |+||||||+|++++.+|.+|++|||+++.+......  ......|.+|+||
T Consensus       115 ~g~~~~~ik~~m~Qll~gl~~~H~~~---IlHRDLKPQNlLi~~~G~lKlaDFGlAra~~ip~~~--yt~evvTlWYRaP  189 (323)
T KOG0594|consen  115 QGLPPRLIKSFMRQLLRGLAFLHSHG---ILHRDLKPQNLLISSSGVLKLADFGLARAFSIPMRT--YTPEVVTLWYRAP  189 (323)
T ss_pred             cCCCHHHHHHHHHHHHHHHHHHHhCC---eecccCCcceEEECCCCcEeeeccchHHHhcCCccc--ccccEEEeeccCH
Confidence            35666889999999999999999999   999999999999999999999999999976543322  3335678899999


Q ss_pred             ccccCC-CcccccceEehhHHHHHHHhcccCCCCcCCCcccccc-cccCCC------------ccc-cCccccCCcCHHH
Q 041793           85 EYASDG-KFSVKSDVFSFGILLLEIISGKKNRGFYHSDNKLNLI-GHVSMP------------SQL-IDPCIQGSFNLVE  149 (224)
Q Consensus        85 E~~~~~-~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~-~~~~~~------------~~~-~~~~~~~~~~~~~  149 (224)
                      |++.+. .|+...||||+||++.||++++..|.+....+....+ .....+            ... .-+......+...
T Consensus       190 EvLlGs~~Ys~~vDiWs~GcIfaEm~~~~~LFpG~se~~ql~~If~~lGtP~e~~Wp~v~~~~~~k~~f~~~~~~~~l~~  269 (323)
T KOG0594|consen  190 EVLLGSTSYSTSVDIWSLGCIFAEMFTRRPLFPGDSEIDQLFRIFRLLGTPNEKDWPGVSSLPDYKAPFPKWPGPKDLSS  269 (323)
T ss_pred             HHhcCCCcCCCCcchHhHHHHHHHHHhCCCCCCCCcHHHHHHHHHHHcCCCCccCCCCccccccccccCcCCCCccchHH
Confidence            999886 6889999999999999999999887654432221111 000000            000 0011111111111


Q ss_pred             -----HHHHHHHHHHhccCCCCCCCChHHHHHH
Q 041793          150 -----VIRCIHIGLLCVQQHPKDRPSMPSVILM  177 (224)
Q Consensus       150 -----~~~~~~li~~cl~~dp~~Rps~~~v~~~  177 (224)
                           .....+++.+||+++|.+|.|++.++..
T Consensus       270 ~~~~~~~~~~dll~~~L~y~p~~R~Sa~~al~h  302 (323)
T KOG0594|consen  270 ILPKLDPDGIELLSKLLQYDPAKRISAKGALTH  302 (323)
T ss_pred             hccccCccHHHHHHHHhccCcccCcCHHHHhcC
Confidence                 0246788899999999999999999875


No 108
>cd05617 STKc_aPKC_zeta Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C zeta. Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, zeta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. There are two aPKC isoforms, zeta and iota. PKC-zeta plays a critical role in activating the glucose transport response. It is activated by glucose, insulin, and exercise through diverse pathways
Probab=99.95  E-value=3.7e-28  Score=198.13  Aligned_cols=156  Identities=24%  Similarity=0.377  Sum_probs=116.9

Q ss_pred             CCCCChHHHHHHHHHHHHHHhhhhcCCCCceEecCCCCCceEECCCCCceEeeecceeecCCCCCCCcccccccccccCC
Q 041793            4 CKILDWPKRFHIICGTARGVMYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDEIEGNTNRVIGTYGYMA   83 (224)
Q Consensus         4 ~~~l~~~~~~~i~~qi~~~l~~Lh~~~~~~i~H~dl~~~nil~~~~~~~kl~df~~~~~~~~~~~~~~~~~~~~~~~y~a   83 (224)
                      .+.+++..++.++.||+.||.|||+.|   |+||||||+||+++.++.++|+|||++.......  .......|+..|+|
T Consensus        90 ~~~l~~~~~~~~~~qi~~al~~lH~~~---ivHrDlkp~Nili~~~~~~kl~Dfg~~~~~~~~~--~~~~~~~gt~~y~a  164 (327)
T cd05617          90 QRKLPEEHARFYAAEICIALNFLHERG---IIYRDLKLDNVLLDADGHIKLTDYGMCKEGLGPG--DTTSTFCGTPNYIA  164 (327)
T ss_pred             cCCCCHHHHHHHHHHHHHHHHHHHHCC---eeccCCCHHHEEEeCCCCEEEeccccceeccCCC--CceecccCCcccCC
Confidence            467999999999999999999999999   9999999999999999999999999987532211  11233567889999


Q ss_pred             cccccCCCcccccceEehhHHHHHHHhcccCCCCcCCCcccccc---cccCCCccccCccccCCcCHHHHHHHHHHHHHh
Q 041793           84 PEYASDGKFSVKSDVFSFGILLLEIISGKKNRGFYHSDNKLNLI---GHVSMPSQLIDPCIQGSFNLVEVIRCIHIGLLC  160 (224)
Q Consensus        84 PE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~c  160 (224)
                      ||.+.+..++.++|+||||+++|+|++|..||............   ........   ...+...+    ..+.+++.+|
T Consensus       165 PE~~~~~~~~~~~DiwslGvil~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~~---~~~p~~~~----~~~~~li~~~  237 (327)
T cd05617         165 PEILRGEEYGFSVDWWALGVLMFEMMAGRSPFDIITDNPDMNTEDYLFQVILEKP---IRIPRFLS----VKASHVLKGF  237 (327)
T ss_pred             HHHHCCCCCCchheeehhHHHHHHHHhCCCCCCccCCCcccccHHHHHHHHHhCC---CCCCCCCC----HHHHHHHHHH
Confidence            99999889999999999999999999999998643322111110   00000000   00111112    2356888999


Q ss_pred             ccCCCCCCCCh
Q 041793          161 VQQHPKDRPSM  171 (224)
Q Consensus       161 l~~dp~~Rps~  171 (224)
                      |+.||++|+++
T Consensus       238 L~~dP~~R~~~  248 (327)
T cd05617         238 LNKDPKERLGC  248 (327)
T ss_pred             hccCHHHcCCC
Confidence            99999999985


No 109
>cd05060 PTKc_Syk_like Catalytic domain of Spleen Tyrosine Kinase-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Spleen Tyrosine Kinase (Syk) subfamily; catalytic (c) domain. The Syk subfamily is composed of Syk, ZAP-70, Shark, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Syk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. They are involved in the signaling downstream of activated receptors (including B-cell, T-cell, and Fc receptors) that contain ITAMs (immunoreceptor tyr activation motifs), leading to processes such as cell proliferation, differentiation, survival, adhesion, mi
Probab=99.95  E-value=5.3e-28  Score=190.48  Aligned_cols=164  Identities=30%  Similarity=0.423  Sum_probs=124.1

Q ss_pred             CCCChHHHHHHHHHHHHHHhhhhcCCCCceEecCCCCCceEECCCCCceEeeecceeecCCCCCCCc-ccccccccccCC
Q 041793            5 KILDWPKRFHIICGTARGVMYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDEIEGN-TNRVIGTYGYMA   83 (224)
Q Consensus         5 ~~l~~~~~~~i~~qi~~~l~~Lh~~~~~~i~H~dl~~~nil~~~~~~~kl~df~~~~~~~~~~~~~~-~~~~~~~~~y~a   83 (224)
                      +.+++..++.++.|++.||+|||+.+   ++|+||+|+||+++.++.++|+|||++........... .....++..|+|
T Consensus        90 ~~~~~~~~~~~~~qi~~~l~~lh~~~---i~H~di~p~nili~~~~~~kl~df~~~~~~~~~~~~~~~~~~~~~~~~y~a  166 (257)
T cd05060          90 REIPVSDLKELAHQVAMGMAYLESKH---FVHRDLAARNVLLVNRHQAKISDFGMSRALGAGSDYYRATTAGRWPLKWYA  166 (257)
T ss_pred             CCCCHHHHHHHHHHHHHHHHHHhhcC---eeccCcccceEEEcCCCcEEeccccccceeecCCcccccccCccccccccC
Confidence            46899999999999999999999999   99999999999999999999999999886643322111 111123457999


Q ss_pred             cccccCCCcccccceEehhHHHHHHHh-cccCCCCcCCCcccccccccCCCccccCccccCCcCHHHHHHHHHHHHHhcc
Q 041793           84 PEYASDGKFSVKSDVFSFGILLLEIIS-GKKNRGFYHSDNKLNLIGHVSMPSQLIDPCIQGSFNLVEVIRCIHIGLLCVQ  162 (224)
Q Consensus        84 PE~~~~~~~~~~~Di~slG~il~~l~~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~  162 (224)
                      ||.+.+..++.++|+||||+++|++++ |..||...........+...   .....   ....    ...+.+++.+||.
T Consensus       167 PE~~~~~~~~~~~Di~slG~~l~~~~~~g~~p~~~~~~~~~~~~~~~~---~~~~~---~~~~----~~~l~~li~~cl~  236 (257)
T cd05060         167 PECINYGKFSSKSDVWSYGVTLWEAFSYGAKPYGEMKGAEVIAMLESG---ERLPR---PEEC----PQEIYSIMLSCWK  236 (257)
T ss_pred             HHHhcCCCCCccchHHHHHHHHHHHHcCCCCCcccCCHHHHHHHHHcC---CcCCC---CCCC----CHHHHHHHHHHhc
Confidence            999988889999999999999999997 89997654332221111111   11100   1111    1346789999999


Q ss_pred             CCCCCCCChHHHHHHhccC
Q 041793          163 QHPKDRPSMPSVILMLGSE  181 (224)
Q Consensus       163 ~dp~~Rps~~~v~~~L~~~  181 (224)
                      .+|++||++.+|++.|+..
T Consensus       237 ~~p~~Rp~~~~l~~~l~~~  255 (257)
T cd05060         237 YRPEDRPTFSELESTFRRD  255 (257)
T ss_pred             CChhhCcCHHHHHHHHHhc
Confidence            9999999999999999764


No 110
>cd08229 STKc_Nek7 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 7. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 7 (Nek7) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek7 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek7 is required for mitotic spindle formation and cytokinesis. It is enriched in the centrosome and is critical for microtubule nucleation. Nek7 is activated by Nek9 during mitosis, and may regulate the p70 ribosomal S6 kinase.
Probab=99.95  E-value=6.1e-28  Score=191.02  Aligned_cols=166  Identities=20%  Similarity=0.323  Sum_probs=125.2

Q ss_pred             CCCCChHHHHHHHHHHHHHHhhhhcCCCCceEecCCCCCceEECCCCCceEeeecceeecCCCCCCCcccccccccccCC
Q 041793            4 CKILDWPKRFHIICGTARGVMYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDEIEGNTNRVIGTYGYMA   83 (224)
Q Consensus         4 ~~~l~~~~~~~i~~qi~~~l~~Lh~~~~~~i~H~dl~~~nil~~~~~~~kl~df~~~~~~~~~~~~~~~~~~~~~~~y~a   83 (224)
                      ...+++.+++.++.||+.||.|||+.|   ++|+||+|+||+++.++.++++|||++.........  .....++..|+|
T Consensus       100 ~~~~~~~~~~~~~~~i~~~l~~LH~~~---i~H~dl~p~nili~~~~~~~l~dfg~~~~~~~~~~~--~~~~~~~~~~~a  174 (267)
T cd08229         100 KRLIPEKTVWKYFVQLCSALEHMHSRR---VMHRDIKPANVFITATGVVKLGDLGLGRFFSSKTTA--AHSLVGTPYYMS  174 (267)
T ss_pred             CCCCCHHHHHHHHHHHHHHHHHHHHCC---eecCCCCHHHEEEcCCCCEEECcchhhhccccCCcc--cccccCCcCccC
Confidence            456899999999999999999999999   999999999999999999999999998765433211  122356778999


Q ss_pred             cccccCCCcccccceEehhHHHHHHHhcccCCCCcCCCcccccccccCCCccccCccccCCcCHHHHHHHHHHHHHhccC
Q 041793           84 PEYASDGKFSVKSDVFSFGILLLEIISGKKNRGFYHSDNKLNLIGHVSMPSQLIDPCIQGSFNLVEVIRCIHIGLLCVQQ  163 (224)
Q Consensus        84 PE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~  163 (224)
                      ||.+.+..++.++|+||||+++|+|++|..||...... ............   .+...   .......+.+++.+||+.
T Consensus       175 pe~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~-~~~~~~~~~~~~---~~~~~---~~~~~~~~~~li~~~l~~  247 (267)
T cd08229         175 PERIHENGYNFKSDIWSLGCLLYEMAALQSPFYGDKMN-LYSLCKKIEQCD---YPPLP---SDHYSEELRQLVNMCINP  247 (267)
T ss_pred             HHHhcCCCccchhhHHHHHHHHHHHHhCCCCcccccch-HHHHhhhhhcCC---CCCCC---cccccHHHHHHHHHhcCC
Confidence            99998888899999999999999999999997532211 111111111000   00000   011123577889999999


Q ss_pred             CCCCCCChHHHHHHhccC
Q 041793          164 HPKDRPSMPSVILMLGSE  181 (224)
Q Consensus       164 dp~~Rps~~~v~~~L~~~  181 (224)
                      ||++|||+.+|++.++..
T Consensus       248 ~p~~Rpt~~~i~~~~~~~  265 (267)
T cd08229         248 DPEKRPDITYVYDVAKRM  265 (267)
T ss_pred             CcccCCCHHHHHHHHhhh
Confidence            999999999999988754


No 111
>cd07878 STKc_p38beta_MAPK11 Catalytic domain of the Serine/Threonine Kinase, p38beta Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), p38beta subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38beta subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38beta, also called MAPK11, is 
Probab=99.95  E-value=3.1e-28  Score=199.75  Aligned_cols=166  Identities=27%  Similarity=0.363  Sum_probs=119.3

Q ss_pred             CCCCChHHHHHHHHHHHHHHhhhhcCCCCceEecCCCCCceEECCCCCceEeeecceeecCCCCCCCcccccccccccCC
Q 041793            4 CKILDWPKRFHIICGTARGVMYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDEIEGNTNRVIGTYGYMA   83 (224)
Q Consensus         4 ~~~l~~~~~~~i~~qi~~~l~~Lh~~~~~~i~H~dl~~~nil~~~~~~~kl~df~~~~~~~~~~~~~~~~~~~~~~~y~a   83 (224)
                      .+.+++.++..++.||+.||.|||+.|   |+||||||+||+++.++.+||+|||++......     .....++..|+|
T Consensus       112 ~~~l~~~~~~~i~~qi~~aL~~LH~~~---ivHrdikp~Nil~~~~~~~kl~Dfg~~~~~~~~-----~~~~~~t~~y~a  183 (343)
T cd07878         112 CQKLSDEHVQFLIYQLLRGLKYIHSAG---IIHRDLKPSNVAVNEDCELRILDFGLARQADDE-----MTGYVATRWYRA  183 (343)
T ss_pred             cCCCCHHHHHHHHHHHHHHHHHHHHCC---eecccCChhhEEECCCCCEEEcCCccceecCCC-----cCCccccccccC
Confidence            356899999999999999999999999   999999999999999999999999999865332     223467889999


Q ss_pred             cccccC-CCcccccceEehhHHHHHHHhcccCCCCcCCCcccccc-cccCCCc-ccc-----------Ccccc--CCcCH
Q 041793           84 PEYASD-GKFSVKSDVFSFGILLLEIISGKKNRGFYHSDNKLNLI-GHVSMPS-QLI-----------DPCIQ--GSFNL  147 (224)
Q Consensus        84 PE~~~~-~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~-~~~~~~~-~~~-----------~~~~~--~~~~~  147 (224)
                      ||.+.+ ..++.++|||||||++|+|++|+.||...........+ .....+. ...           .....  ...+.
T Consensus       184 PE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  263 (343)
T cd07878         184 PEIMLNWMHYNQTVDIWSVGCIMAELLKGKALFPGNDYIDQLKRIMEVVGTPSPEVLKKISSEHARKYIQSLPHMPQQDL  263 (343)
T ss_pred             chHhcCCccCCchhhhHhHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHhCCCCHHHHHhcchhhHHHHhhccccccchhH
Confidence            999876 46789999999999999999999998543221111000 0000000 000           00000  00000


Q ss_pred             H-----HHHHHHHHHHHhccCCCCCCCChHHHHHH
Q 041793          148 V-----EVIRCIHIGLLCVQQHPKDRPSMPSVILM  177 (224)
Q Consensus       148 ~-----~~~~~~~li~~cl~~dp~~Rps~~~v~~~  177 (224)
                      .     ....+.+|+.+||+.||++|||+.++++.
T Consensus       264 ~~~~~~~~~~~~~li~~mL~~dp~~R~s~~ell~h  298 (343)
T cd07878         264 KKIFRGANPLAIDLLEKMLVLDSDKRISASEALAH  298 (343)
T ss_pred             HHhccCCCHHHHHHHHHHcCCChhhCCCHHHHhcC
Confidence            0     01235789999999999999999999864


No 112
>cd05594 STKc_PKB_alpha Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B alpha. Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, alpha (or Akt1) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-alpha is predominantly expressed in endothelial cells. It is critical for the regulation of angiogenesis and the maintenance of vascular integrity. It also plays a role in adipocyte differentiation. Mice deficien
Probab=99.95  E-value=2.3e-28  Score=199.22  Aligned_cols=158  Identities=22%  Similarity=0.338  Sum_probs=121.0

Q ss_pred             CCCCChHHHHHHHHHHHHHHhhhhc-CCCCceEecCCCCCceEECCCCCceEeeecceeecCCCCCCCcccccccccccC
Q 041793            4 CKILDWPKRFHIICGTARGVMYLHQ-DSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDEIEGNTNRVIGTYGYM   82 (224)
Q Consensus         4 ~~~l~~~~~~~i~~qi~~~l~~Lh~-~~~~~i~H~dl~~~nil~~~~~~~kl~df~~~~~~~~~~~~~~~~~~~~~~~y~   82 (224)
                      .+.+++.++..++.||+.||.|||+ .|   |+||||||+||+++.++.++|+|||++.......  .......++..|+
T Consensus        89 ~~~l~~~~~~~~~~qi~~aL~~lH~~~~---ivHrDikp~NIll~~~~~~kL~Dfg~~~~~~~~~--~~~~~~~gt~~y~  163 (325)
T cd05594          89 ERVFSEDRARFYGAEIVSALDYLHSEKN---VVYRDLKLENLMLDKDGHIKITDFGLCKEGIKDG--ATMKTFCGTPEYL  163 (325)
T ss_pred             cCCCCHHHHHHHHHHHHHHHHHHHhcCC---EEecCCCCCeEEECCCCCEEEecCCCCeecCCCC--cccccccCCcccC
Confidence            4678999999999999999999997 78   9999999999999999999999999987532211  1122346788999


Q ss_pred             CcccccCCCcccccceEehhHHHHHHHhcccCCCCcCCCcccccccccCCCccccCccccCCcCHHHHHHHHHHHHHhcc
Q 041793           83 APEYASDGKFSVKSDVFSFGILLLEIISGKKNRGFYHSDNKLNLIGHVSMPSQLIDPCIQGSFNLVEVIRCIHIGLLCVQ  162 (224)
Q Consensus        83 aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~  162 (224)
                      |||.+.+..++.++|+|||||++|+|++|..||...........+   .......    +...+    ..+.+++.+||+
T Consensus       164 aPE~~~~~~~~~~~DiwslG~il~el~tG~~Pf~~~~~~~~~~~i---~~~~~~~----p~~~~----~~~~~li~~~L~  232 (325)
T cd05594         164 APEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHEKLFELI---LMEEIRF----PRTLS----PEAKSLLSGLLK  232 (325)
T ss_pred             CHHHHccCCCCCccccccccceeeeeccCCCCCCCCCHHHHHHHH---hcCCCCC----CCCCC----HHHHHHHHHHhh
Confidence            999999888999999999999999999999998653322221111   1111111    11111    246678899999


Q ss_pred             CCCCCCC-----ChHHHHHH
Q 041793          163 QHPKDRP-----SMPSVILM  177 (224)
Q Consensus       163 ~dp~~Rp-----s~~~v~~~  177 (224)
                      .||++|+     ++.++++.
T Consensus       233 ~dP~~R~~~~~~~~~~il~h  252 (325)
T cd05594         233 KDPKQRLGGGPDDAKEIMQH  252 (325)
T ss_pred             cCHHHhCCCCCCCHHHHhcC
Confidence            9999996     89998754


No 113
>cd05068 PTKc_Frk_like Catalytic domain of Fyn-related kinase-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Human Fyn-related kinase (Frk) and similar proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Frk and Srk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins a
Probab=99.95  E-value=1.2e-27  Score=188.82  Aligned_cols=162  Identities=33%  Similarity=0.480  Sum_probs=122.9

Q ss_pred             CCCChHHHHHHHHHHHHHHhhhhcCCCCceEecCCCCCceEECCCCCceEeeecceeecCCCCCCCcccccccccccCCc
Q 041793            5 KILDWPKRFHIICGTARGVMYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDEIEGNTNRVIGTYGYMAP   84 (224)
Q Consensus         5 ~~l~~~~~~~i~~qi~~~l~~Lh~~~~~~i~H~dl~~~nil~~~~~~~kl~df~~~~~~~~~~~~~~~~~~~~~~~y~aP   84 (224)
                      ..+++.+++.++.|++.||.|||+.|   ++|+||+|+||+++.++.++|+|||++.......... ......+..|+||
T Consensus        98 ~~~~~~~~~~~~~~i~~~l~~lH~~~---i~H~dl~p~Nil~~~~~~~~l~dfg~~~~~~~~~~~~-~~~~~~~~~y~aP  173 (261)
T cd05068          98 RALKLPQLIDMAAQVASGMAYLEAQN---YIHRDLAARNVLVGENNICKVADFGLARVIKEDIYEA-REGAKFPIKWTAP  173 (261)
T ss_pred             CCCCHHHHHHHHHHHHHHHHHHHhCC---eeeccCCcceEEEcCCCCEEECCcceEEEccCCcccc-cCCCcCceeccCc
Confidence            46899999999999999999999999   9999999999999999999999999998765322111 1111223579999


Q ss_pred             ccccCCCcccccceEehhHHHHHHHh-cccCCCCcCCCcccccccccCCCccccCccccCCcCHHHHHHHHHHHHHhccC
Q 041793           85 EYASDGKFSVKSDVFSFGILLLEIIS-GKKNRGFYHSDNKLNLIGHVSMPSQLIDPCIQGSFNLVEVIRCIHIGLLCVQQ  163 (224)
Q Consensus        85 E~~~~~~~~~~~Di~slG~il~~l~~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~  163 (224)
                      |.+.+..++.++|+||||++++++++ |+.||...........+....   ..  + ....    ....+.+++.+||+.
T Consensus       174 E~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~~~~~~~~~~~~~---~~--~-~~~~----~~~~~~~li~~~l~~  243 (261)
T cd05068         174 EAALYNRFSIKSDVWSFGILLTEIVTYGRMPYPGMTNAEVLQQVDQGY---RM--P-CPPG----CPKELYDIMLDCWKE  243 (261)
T ss_pred             cccccCCCCchhhHHHHHHHHHHHHhcCCCCCCCCCHHHHHHHHHcCC---CC--C-CCCc----CCHHHHHHHHHHhhc
Confidence            99988889999999999999999999 888875433221111111110   00  0 0011    123577899999999


Q ss_pred             CCCCCCChHHHHHHhcc
Q 041793          164 HPKDRPSMPSVILMLGS  180 (224)
Q Consensus       164 dp~~Rps~~~v~~~L~~  180 (224)
                      +|++||++.++++.|+.
T Consensus       244 ~P~~Rp~~~~l~~~l~~  260 (261)
T cd05068         244 DPDDRPTFETLQWKLED  260 (261)
T ss_pred             CcccCCCHHHHHHHHhc
Confidence            99999999999999864


No 114
>cd05612 STKc_PRKX_like Catalytic domain of PRKX-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), cAMP-dependent protein kinase (PKA) subfamily, PRKX-like kinases, catalytic (c) subunit. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKA subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include human PRKX (X chromosome-encoded protein kinase), Drosophila DC2, and similar proteins. PRKX is present in many tissues including fetal and adult brain, kidney, and lung. The PRKX gene is located in the Xp22.3 subregion and has a homolog called PRKY on the Y chromosome. An abnormal interchange between PRKX aand PRKY leads to the sex reversal disorder of XX males and XY females. PRKX is implicated in granulocyt
Probab=99.95  E-value=2.4e-28  Score=196.15  Aligned_cols=155  Identities=21%  Similarity=0.243  Sum_probs=120.1

Q ss_pred             CCCCChHHHHHHHHHHHHHHhhhhcCCCCceEecCCCCCceEECCCCCceEeeecceeecCCCCCCCcccccccccccCC
Q 041793            4 CKILDWPKRFHIICGTARGVMYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDEIEGNTNRVIGTYGYMA   83 (224)
Q Consensus         4 ~~~l~~~~~~~i~~qi~~~l~~Lh~~~~~~i~H~dl~~~nil~~~~~~~kl~df~~~~~~~~~~~~~~~~~~~~~~~y~a   83 (224)
                      .+.+++..++.++.||+.||.|||+.|   ++||||+|+||+++.++.++|+|||++......     .....++..|+|
T Consensus        95 ~~~~~~~~~~~~~~qi~~~l~~lH~~~---i~H~dlkp~NIli~~~~~~kl~Dfg~~~~~~~~-----~~~~~gt~~y~a  166 (291)
T cd05612          95 SGRFSNSTGLFYASEIVCALEYLHSKE---IVYRDLKPENILLDKEGHIKLTDFGFAKKLRDR-----TWTLCGTPEYLA  166 (291)
T ss_pred             cCCCCHHHHHHHHHHHHHHHHHHHHCC---eeecCCCHHHeEECCCCCEEEEecCcchhccCC-----cccccCChhhcC
Confidence            457899999999999999999999999   999999999999999999999999998765321     223457889999


Q ss_pred             cccccCCCcccccceEehhHHHHHHHhcccCCCCcCCCcccccccccCCCccccCccccCCcCHHHHHHHHHHHHHhccC
Q 041793           84 PEYASDGKFSVKSDVFSFGILLLEIISGKKNRGFYHSDNKLNLIGHVSMPSQLIDPCIQGSFNLVEVIRCIHIGLLCVQQ  163 (224)
Q Consensus        84 PE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~  163 (224)
                      ||.+.+..++.++|||||||++|+|++|..||...........+   .....    ......+    ..+.+|+.+||+.
T Consensus       167 PE~~~~~~~~~~~DiwSlG~il~~l~~g~~pf~~~~~~~~~~~i---~~~~~----~~~~~~~----~~~~~li~~~l~~  235 (291)
T cd05612         167 PEVIQSKGHNKAVDWWALGILIYEMLVGYPPFFDDNPFGIYEKI---LAGKL----EFPRHLD----LYAKDLIKKLLVV  235 (291)
T ss_pred             HHHHcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHH---HhCCc----CCCccCC----HHHHHHHHHHcCC
Confidence            99998888999999999999999999999998653322111111   10000    0111111    2467899999999


Q ss_pred             CCCCCCC-----hHHHHHH
Q 041793          164 HPKDRPS-----MPSVILM  177 (224)
Q Consensus       164 dp~~Rps-----~~~v~~~  177 (224)
                      ||.+||+     ++++++.
T Consensus       236 dp~~R~~~~~~~~~~~l~h  254 (291)
T cd05612         236 DRTRRLGNMKNGADDVKNH  254 (291)
T ss_pred             CHHHccCCccCCHHHHhcC
Confidence            9999995     8887654


No 115
>cd05070 PTKc_Fyn_Yrk Catalytic domain of the Protein Tyrosine Kinases, Fyn and Yrk. Protein Tyrosine Kinase (PTK) family; Fyn and Yrk kinases; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fyn and Yrk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that r
Probab=99.95  E-value=7.9e-28  Score=189.82  Aligned_cols=163  Identities=29%  Similarity=0.472  Sum_probs=122.9

Q ss_pred             CCCCChHHHHHHHHHHHHHHhhhhcCCCCceEecCCCCCceEECCCCCceEeeecceeecCCCCCCCcccccccccccCC
Q 041793            4 CKILDWPKRFHIICGTARGVMYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDEIEGNTNRVIGTYGYMA   83 (224)
Q Consensus         4 ~~~l~~~~~~~i~~qi~~~l~~Lh~~~~~~i~H~dl~~~nil~~~~~~~kl~df~~~~~~~~~~~~~~~~~~~~~~~y~a   83 (224)
                      ...+++.+++.++.|++.||.|||+.+   ++|+||+|.||+++.++.++++|||++.......... .....++..|+|
T Consensus        96 ~~~~~~~~~~~~~~~l~~al~~lH~~~---i~H~di~p~Nili~~~~~~~l~dfg~~~~~~~~~~~~-~~~~~~~~~y~a  171 (260)
T cd05070          96 GRALKLPNLVDMAAQVAAGMAYIERMN---YIHRDLRSANILVGDGLVCKIADFGLARLIEDNEYTA-RQGAKFPIKWTA  171 (260)
T ss_pred             CCCCCHHHHHHHHHHHHHHHHHHHHCC---cccCCCccceEEEeCCceEEeCCceeeeeccCccccc-ccCCCCCccccC
Confidence            346899999999999999999999999   9999999999999999999999999998754322111 111234567999


Q ss_pred             cccccCCCcccccceEehhHHHHHHHh-cccCCCCcCCCcccccccccCCCccccCccccCCcCHHHHHHHHHHHHHhcc
Q 041793           84 PEYASDGKFSVKSDVFSFGILLLEIIS-GKKNRGFYHSDNKLNLIGHVSMPSQLIDPCIQGSFNLVEVIRCIHIGLLCVQ  162 (224)
Q Consensus        84 PE~~~~~~~~~~~Di~slG~il~~l~~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~  162 (224)
                      ||.+.+..++.++|+||||++++++++ |..||...........+   ......   ......    ...+.+++.+||+
T Consensus       172 PE~~~~~~~~~~~Di~slG~~l~~l~~~g~~p~~~~~~~~~~~~~---~~~~~~---~~~~~~----~~~~~~li~~~l~  241 (260)
T cd05070         172 PEAALYGRFTIKSDVWSFGILLTELVTKGRVPYPGMNNREVLEQV---ERGYRM---PCPQDC----PISLHELMLQCWK  241 (260)
T ss_pred             hHHHhcCCCcchhhhHHHHHHHHHHHhcCCCCCCCCCHHHHHHHH---HcCCCC---CCCCcC----CHHHHHHHHHHcc
Confidence            999888888999999999999999999 88887543322111111   110000   001111    2347789999999


Q ss_pred             CCCCCCCChHHHHHHhcc
Q 041793          163 QHPKDRPSMPSVILMLGS  180 (224)
Q Consensus       163 ~dp~~Rps~~~v~~~L~~  180 (224)
                      .+|++|||+.++.+.|+.
T Consensus       242 ~~p~~Rpt~~~l~~~l~~  259 (260)
T cd05070         242 KDPEERPTFEYLQSFLED  259 (260)
T ss_pred             cCcccCcCHHHHHHHHhc
Confidence            999999999999998864


No 116
>cd05588 STKc_aPKC Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C. Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. They contain a C2-like region, instead of a calcium-binding (C2) region found in classical PKCs, in their regulatory domain. There are two aPKC isoforms, zeta and iota. aPKCs are involved in many cellular functions incl
Probab=99.95  E-value=3.4e-28  Score=198.54  Aligned_cols=160  Identities=23%  Similarity=0.354  Sum_probs=119.3

Q ss_pred             CCCCChHHHHHHHHHHHHHHhhhhcCCCCceEecCCCCCceEECCCCCceEeeecceeecCCCCCCCcccccccccccCC
Q 041793            4 CKILDWPKRFHIICGTARGVMYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDEIEGNTNRVIGTYGYMA   83 (224)
Q Consensus         4 ~~~l~~~~~~~i~~qi~~~l~~Lh~~~~~~i~H~dl~~~nil~~~~~~~kl~df~~~~~~~~~~~~~~~~~~~~~~~y~a   83 (224)
                      .+.+++..++.++.||+.||.|||+.|   ++||||||+||+++.++.++|+|||++......  ........|+..|+|
T Consensus        90 ~~~l~~~~~~~~~~qi~~~l~~lH~~~---ivH~dlkp~Nili~~~~~~kL~Dfg~~~~~~~~--~~~~~~~~gt~~y~a  164 (329)
T cd05588          90 QRKLPEEHARFYSAEISLALNFLHERG---IIYRDLKLDNVLLDAEGHIKLTDYGMCKEGIRP--GDTTSTFCGTPNYIA  164 (329)
T ss_pred             cCCCCHHHHHHHHHHHHHHHHHHHHCC---eEecCCCHHHeEECCCCCEEECcCccccccccC--CCccccccCCccccC
Confidence            467999999999999999999999999   999999999999999999999999998643211  111223567889999


Q ss_pred             cccccCCCcccccceEehhHHHHHHHhcccCCCCcCCCcc-----cc-cccccCCCccccCccccCCcCHHHHHHHHHHH
Q 041793           84 PEYASDGKFSVKSDVFSFGILLLEIISGKKNRGFYHSDNK-----LN-LIGHVSMPSQLIDPCIQGSFNLVEVIRCIHIG  157 (224)
Q Consensus        84 PE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~-----~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li  157 (224)
                      ||.+.+..++.++|+|||||++|+|++|+.||........     .. ....... ...   ..+...+    ..+.+++
T Consensus       165 PE~~~~~~~~~~~DiwslG~~l~el~~g~~Pf~~~~~~~~~~~~~~~~~~~~~~~-~~~---~~p~~~~----~~~~~li  236 (329)
T cd05588         165 PEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGMSDNPDQNTEDYLFQVILE-KQI---RIPRSLS----VKASSVL  236 (329)
T ss_pred             HHHHcCCCCCCccceechHHHHHHHHHCCCCcccccccccccccchHHHHHHHHc-CCC---CCCCCCC----HHHHHHH
Confidence            9999998899999999999999999999999864321110     00 0000000 000   0111111    2467889


Q ss_pred             HHhccCCCCCCCC------hHHHHH
Q 041793          158 LLCVQQHPKDRPS------MPSVIL  176 (224)
Q Consensus       158 ~~cl~~dp~~Rps------~~~v~~  176 (224)
                      .+||+.||.+||+      ++++++
T Consensus       237 ~~~L~~dP~~R~~~~~~~~~~~i~~  261 (329)
T cd05588         237 KGFLNKDPKERLGCHPQTGFRDIKS  261 (329)
T ss_pred             HHHhccCHHHcCCCCCCCCHHHHhc
Confidence            9999999999998      567654


No 117
>cd05050 PTKc_Musk Catalytic domain of the Protein Tyrosine Kinase, Muscle-specific kinase. Protein Tyrosine Kinase (PTK) family; Muscle-specific kinase (Musk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Musk is a receptor tyr kinase (RTK) containing an extracellular region with four immunoglobulin-like domains and a cysteine-rich cluster, a transmembrane segment, and an intracellular catalytic domain. Musk is expressed and concentrated in the postsynaptic membrane in skeletal muscle. It is essential for the establishment of the neuromuscular junction (NMJ), a peripheral synapse that conveys signals from motor neurons to muscle cells. Agrin, a large proteoglycan released from motor neurons, stimulates M
Probab=99.95  E-value=5.8e-28  Score=193.36  Aligned_cols=163  Identities=26%  Similarity=0.430  Sum_probs=121.3

Q ss_pred             CCCChHHHHHHHHHHHHHHhhhhcCCCCceEecCCCCCceEECCCCCceEeeecceeecCCCCCCCcccccccccccCCc
Q 041793            5 KILDWPKRFHIICGTARGVMYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDEIEGNTNRVIGTYGYMAP   84 (224)
Q Consensus         5 ~~l~~~~~~~i~~qi~~~l~~Lh~~~~~~i~H~dl~~~nil~~~~~~~kl~df~~~~~~~~~~~~~~~~~~~~~~~y~aP   84 (224)
                      ..+++.+++.++.||+.||.|||+.+   ++|+||+|.||+++.++.++++|||++.................+..|+||
T Consensus       125 ~~l~~~~~~~~~~~i~~aL~~lH~~~---i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~y~aP  201 (288)
T cd05050         125 LPLSCTEQLCIAKQVAAGMAYLSERK---FVHRDLATRNCLVGENMVVKIADFGLSRNIYSADYYKASENDAIPIRWMPP  201 (288)
T ss_pred             cccCHHHHHHHHHHHHHHHHHHHhCC---eecccccHhheEecCCCceEECccccceecccCccccccCCCccChhhcCH
Confidence            45889999999999999999999999   999999999999999999999999998765332211111122345679999


Q ss_pred             ccccCCCcccccceEehhHHHHHHHh-cccCCCCcCCCcccccccccCCCccccCccccCCcCHHHHHHHHHHHHHhccC
Q 041793           85 EYASDGKFSVKSDVFSFGILLLEIIS-GKKNRGFYHSDNKLNLIGHVSMPSQLIDPCIQGSFNLVEVIRCIHIGLLCVQQ  163 (224)
Q Consensus        85 E~~~~~~~~~~~Di~slG~il~~l~~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~  163 (224)
                      |.+.+..++.++|+|||||++|+|++ |..||...........+....    .. .. ...    ....+.+|+.+||+.
T Consensus       202 E~~~~~~~~~~~Dv~slG~il~el~~~~~~p~~~~~~~~~~~~~~~~~----~~-~~-~~~----~~~~l~~li~~~l~~  271 (288)
T cd05050         202 ESIFYNRYTTESDVWAYGVVLWEIFSYGMQPYYGMAHEEVIYYVRDGN----VL-SC-PDN----CPLELYNLMRLCWSK  271 (288)
T ss_pred             HHHhcCCCCchhHHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHhcCC----CC-CC-CCC----CCHHHHHHHHHHccc
Confidence            99988889999999999999999997 777764322221111111111    00 00 011    123577899999999


Q ss_pred             CCCCCCChHHHHHHhcc
Q 041793          164 HPKDRPSMPSVILMLGS  180 (224)
Q Consensus       164 dp~~Rps~~~v~~~L~~  180 (224)
                      ||++|||+.||++.|++
T Consensus       272 ~p~~Rpt~~el~~~l~~  288 (288)
T cd05050         272 LPSDRPSFASINRILQR  288 (288)
T ss_pred             CcccCCCHHHHHHHhhC
Confidence            99999999999999864


No 118
>cd05575 STKc_SGK Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase. Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3 (also called cytokine-independent survival kinase CISK). SGKs are activated by insulin and growth factors via phosphoinositide 3-kinase and PDK1. They activate ion channels, ion carriers, and the Na-K-ATPase, as well as regulate the activity of enzymes and transcription factors. SGKs play important roles in transport, hormone release, neuroexcitability, cell pr
Probab=99.95  E-value=5.2e-28  Score=196.94  Aligned_cols=153  Identities=22%  Similarity=0.282  Sum_probs=117.2

Q ss_pred             CCCCChHHHHHHHHHHHHHHhhhhcCCCCceEecCCCCCceEECCCCCceEeeecceeecCCCCCCCcccccccccccCC
Q 041793            4 CKILDWPKRFHIICGTARGVMYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDEIEGNTNRVIGTYGYMA   83 (224)
Q Consensus         4 ~~~l~~~~~~~i~~qi~~~l~~Lh~~~~~~i~H~dl~~~nil~~~~~~~kl~df~~~~~~~~~~~~~~~~~~~~~~~y~a   83 (224)
                      .+.+++..+..++.||+.||.|||+.|   |+||||||+||+++.++.++|+|||++.......  .......|+..|+|
T Consensus        90 ~~~~~~~~~~~~~~qi~~~l~~lH~~g---ivH~dikp~NIll~~~~~~kl~Dfg~~~~~~~~~--~~~~~~~gt~~y~a  164 (323)
T cd05575          90 ERSFPEPRARFYAAEIASALGYLHSLN---IIYRDLKPENILLDSQGHVVLTDFGLCKEGIEHS--KTTSTFCGTPEYLA  164 (323)
T ss_pred             cCCCCHHHHHHHHHHHHHHHHHHHHCC---eEeCCCCHHHeEECCCCcEEEeccCCCcccccCC--CccccccCChhhcC
Confidence            467899999999999999999999999   9999999999999999999999999986532211  11223457889999


Q ss_pred             cccccCCCcccccceEehhHHHHHHHhcccCCCCcCCCcccccccccCCCccccCccccCCcCHHHHHHHHHHHHHhccC
Q 041793           84 PEYASDGKFSVKSDVFSFGILLLEIISGKKNRGFYHSDNKLNLIGHVSMPSQLIDPCIQGSFNLVEVIRCIHIGLLCVQQ  163 (224)
Q Consensus        84 PE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~  163 (224)
                      ||.+.+..++.++|+|||||++|+|++|..||.......   ....+.......    ....    ...+.+++.+||+.
T Consensus       165 PE~~~~~~~~~~~DvwslG~il~ell~g~~pf~~~~~~~---~~~~i~~~~~~~----~~~~----~~~~~~li~~~l~~  233 (323)
T cd05575         165 PEVLRKQPYDRTVDWWCLGAVLYEMLYGLPPFYSRDTAE---MYDNILNKPLRL----KPNI----SVSARHLLEGLLQK  233 (323)
T ss_pred             hhhhcCCCCCccccccccchhhhhhhcCCCCCCCCCHHH---HHHHHHcCCCCC----CCCC----CHHHHHHHHHHhhc
Confidence            999998889999999999999999999999986433221   111111111001    1111    23467888999999


Q ss_pred             CCCCCCChH
Q 041793          164 HPKDRPSMP  172 (224)
Q Consensus       164 dp~~Rps~~  172 (224)
                      ||++||++.
T Consensus       234 ~p~~R~~~~  242 (323)
T cd05575         234 DRTKRLGAK  242 (323)
T ss_pred             CHHhCCCCC
Confidence            999999984


No 119
>cd05115 PTKc_Zap-70 Catalytic domain of the Protein Tyrosine Kinase, Zeta-chain-associated protein of 70kDa. Protein Tyrosine Kinase (PTK) family; Zeta-chain-associated protein of 70kDa (Zap-70); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Zap-70 is a member of the Syk subfamily of kinases, which are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. Zap-70 is primarily expressed in T-cells and NK cells, and is a crucial component in T-cell receptor (TCR) signaling. Zap-70 binds the phosphorylated ITAM (immunoreceptor tyr activation motif) sequences of the activated TCR zeta-chain through its SH2 domains, leading to its pho
Probab=99.95  E-value=3.5e-28  Score=191.76  Aligned_cols=165  Identities=27%  Similarity=0.365  Sum_probs=123.6

Q ss_pred             CCCCCChHHHHHHHHHHHHHHhhhhcCCCCceEecCCCCCceEECCCCCceEeeecceeecCCCCCCCc-cccccccccc
Q 041793            3 RCKILDWPKRFHIICGTARGVMYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDEIEGN-TNRVIGTYGY   81 (224)
Q Consensus         3 ~~~~l~~~~~~~i~~qi~~~l~~Lh~~~~~~i~H~dl~~~nil~~~~~~~kl~df~~~~~~~~~~~~~~-~~~~~~~~~y   81 (224)
                      ....+++.+++.++.||+.||.|||+.|   ++|+||+|+||+++.++.++++|||++........... .....++..|
T Consensus        88 ~~~~~~~~~~~~~~~~i~~~l~~lH~~~---i~H~dlkp~nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~y  164 (257)
T cd05115          88 KKDEITVSNVVELMHQVSMGMKYLEGKN---FVHRDLAARNVLLVNQHYAKISDFGLSKALGADDSYYKARSAGKWPLKW  164 (257)
T ss_pred             CCCCCCHHHHHHHHHHHHHHHHHHHhcC---eeecccchheEEEcCCCcEEeccCCccccccCCccceeccCCCCCCccc
Confidence            3467899999999999999999999999   99999999999999999999999999876533221111 1111224679


Q ss_pred             CCcccccCCCcccccceEehhHHHHHHHh-cccCCCCcCCCcccccccccCCCccccCccccCCcCHHHHHHHHHHHHHh
Q 041793           82 MAPEYASDGKFSVKSDVFSFGILLLEIIS-GKKNRGFYHSDNKLNLIGHVSMPSQLIDPCIQGSFNLVEVIRCIHIGLLC  160 (224)
Q Consensus        82 ~aPE~~~~~~~~~~~Di~slG~il~~l~~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~c  160 (224)
                      +|||.+.+..++.++|+||||+++|++++ |..||...........+.....    .+  .+...    ...+.+++.+|
T Consensus       165 ~aPE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~~~~~~~~~~~~----~~--~~~~~----~~~l~~li~~c  234 (257)
T cd05115         165 YAPECINFRKFSSRSDVWSYGITMWEAFSYGQKPYKKMKGPEVMSFIEQGKR----LD--CPAEC----PPEMYALMKDC  234 (257)
T ss_pred             CCHHHHccCCCCchhhHHHHHHHHHHHhcCCCCCcCcCCHHHHHHHHHCCCC----CC--CCCCC----CHHHHHHHHHH
Confidence            99999988888999999999999999996 9999765433222222211111    00  01111    13466789999


Q ss_pred             ccCCCCCCCChHHHHHHhcc
Q 041793          161 VQQHPKDRPSMPSVILMLGS  180 (224)
Q Consensus       161 l~~dp~~Rps~~~v~~~L~~  180 (224)
                      |..+|++||++.+|.+.|+.
T Consensus       235 ~~~~~~~Rp~~~~i~~~l~~  254 (257)
T cd05115         235 WIYKWEDRPNFAKVEERMRT  254 (257)
T ss_pred             cCCChhhCcCHHHHHHHHhh
Confidence            99999999999999999864


No 120
>PTZ00036 glycogen synthase kinase; Provisional
Probab=99.95  E-value=1e-28  Score=208.76  Aligned_cols=169  Identities=22%  Similarity=0.262  Sum_probs=120.0

Q ss_pred             CCCCCChHHHHHHHHHHHHHHhhhhcCCCCceEecCCCCCceEECCCC-CceEeeecceeecCCCCCCCccccccccccc
Q 041793            3 RCKILDWPKRFHIICGTARGVMYLHQDSRLRIIHRDLKASNVLLDQDM-NPKISDFGLARAFGGDEIEGNTNRVIGTYGY   81 (224)
Q Consensus         3 ~~~~l~~~~~~~i~~qi~~~l~~Lh~~~~~~i~H~dl~~~nil~~~~~-~~kl~df~~~~~~~~~~~~~~~~~~~~~~~y   81 (224)
                      ..+.+++..++.++.||+.||.|||+.|   |+||||||+||+++.++ .+||+|||++.......   ......++..|
T Consensus       163 ~~~~l~~~~~~~~~~qi~~gL~yLH~~~---IiHrDLKp~NILl~~~~~~vkL~DFGla~~~~~~~---~~~~~~~t~~y  236 (440)
T PTZ00036        163 NNHALPLFLVKLYSYQLCRALAYIHSKF---ICHRDLKPQNLLIDPNTHTLKLCDFGSAKNLLAGQ---RSVSYICSRFY  236 (440)
T ss_pred             cCCCCCHHHHHHHHHHHHHHHHHHHHCC---EecCCcCHHHEEEcCCCCceeeeccccchhccCCC---CcccCCCCcCc
Confidence            3567899999999999999999999999   99999999999998665 69999999998654321   12234668889


Q ss_pred             CCcccccCC-CcccccceEehhHHHHHHHhcccCCCCcCCCcccc-cccccCCC---------ccccCccccC--CcCHH
Q 041793           82 MAPEYASDG-KFSVKSDVFSFGILLLEIISGKKNRGFYHSDNKLN-LIGHVSMP---------SQLIDPCIQG--SFNLV  148 (224)
Q Consensus        82 ~aPE~~~~~-~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~-~~~~~~~~---------~~~~~~~~~~--~~~~~  148 (224)
                      +|||.+.+. .++.++|||||||++|+|++|.+||.......... .+.....+         ....+...+.  ..+..
T Consensus       237 ~aPE~~~~~~~~~~~~DiwSlGvil~elltG~~pf~~~~~~~~~~~i~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~l~  316 (440)
T PTZ00036        237 RAPELMLGATNYTTHIDLWSLGCIIAEMILGYPIFSGQSSVDQLVRIIQVLGTPTEDQLKEMNPNYADIKFPDVKPKDLK  316 (440)
T ss_pred             cCHHHhcCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCCHHHHHHhchhhhcccCCccCchhHH
Confidence            999988664 58899999999999999999999986543221111 10000000         0000000000  00000


Q ss_pred             ------HHHHHHHHHHHhccCCCCCCCChHHHHHH
Q 041793          149 ------EVIRCIHIGLLCVQQHPKDRPSMPSVILM  177 (224)
Q Consensus       149 ------~~~~~~~li~~cl~~dp~~Rps~~~v~~~  177 (224)
                            ....+++|+.+||+.||.+|||+.++++.
T Consensus       317 ~~~p~~~~~~~~~li~~~L~~dP~~R~ta~e~l~h  351 (440)
T PTZ00036        317 KVFPKGTPDDAINFISQFLKYEPLKRLNPIEALAD  351 (440)
T ss_pred             HHhccCCCHHHHHHHHHHCCCChhHCcCHHHHhCC
Confidence                  11357789999999999999999999854


No 121
>cd08228 STKc_Nek6 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 6. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 6 (Nek6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek6 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek6 is required for the transition from metaphase to anaphase. It also plays important roles in mitotic spindle formation and cytokinesis.  Activated by Nek9 during mitosis, Nek6 phosphorylates Eg5, a kinesin that is important for spindle bipolarity. Nek6 localizes to spindle microtubules during metaphase
Probab=99.95  E-value=4.2e-28  Score=191.93  Aligned_cols=166  Identities=21%  Similarity=0.325  Sum_probs=125.3

Q ss_pred             CCCCChHHHHHHHHHHHHHHhhhhcCCCCceEecCCCCCceEECCCCCceEeeecceeecCCCCCCCcccccccccccCC
Q 041793            4 CKILDWPKRFHIICGTARGVMYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDEIEGNTNRVIGTYGYMA   83 (224)
Q Consensus         4 ~~~l~~~~~~~i~~qi~~~l~~Lh~~~~~~i~H~dl~~~nil~~~~~~~kl~df~~~~~~~~~~~~~~~~~~~~~~~y~a   83 (224)
                      +..+++.+++.++.||+.||.|||+.+   ++|+||+|+||+++.++.++++|||++........  ......++..|+|
T Consensus       100 ~~~~~~~~~~~~~~~i~~~l~~LH~~~---i~H~dl~~~nil~~~~~~~~l~d~g~~~~~~~~~~--~~~~~~~~~~~~a  174 (267)
T cd08228         100 KRLIPERTVWKYFVQLCSAVEHMHSRR---VMHRDIKPANVFITATGVVKLGDLGLGRFFSSKTT--AAHSLVGTPYYMS  174 (267)
T ss_pred             cCCCCHHHHHHHHHHHHHHHHHHhhCC---eeCCCCCHHHEEEcCCCCEEECccccceeccchhH--HHhcCCCCccccC
Confidence            456889999999999999999999999   99999999999999999999999999887543221  1122356778999


Q ss_pred             cccccCCCcccccceEehhHHHHHHHhcccCCCCcCCCcccccccccCCCccccCccccCCcCHHHHHHHHHHHHHhccC
Q 041793           84 PEYASDGKFSVKSDVFSFGILLLEIISGKKNRGFYHSDNKLNLIGHVSMPSQLIDPCIQGSFNLVEVIRCIHIGLLCVQQ  163 (224)
Q Consensus        84 PE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~  163 (224)
                      ||.+.+..++.++|+||||+++|++++|+.||...... ............  ..+.    ........+.+++.+||+.
T Consensus       175 PE~~~~~~~~~~~Di~slG~~l~el~~g~~p~~~~~~~-~~~~~~~~~~~~--~~~~----~~~~~~~~~~~li~~cl~~  247 (267)
T cd08228         175 PERIHENGYNFKSDIWSLGCLLYEMAALQSPFYGDKMN-LFSLCQKIEQCD--YPPL----PTEHYSEKLRELVSMCIYP  247 (267)
T ss_pred             hhhhccCCCCchhhHHHHHHHHHHHhcCCCCCcccccc-HHHHHHHHhcCC--CCCC----ChhhcCHHHHHHHHHHCCC
Confidence            99998888899999999999999999999997432211 111111111100  0000    0111124577899999999


Q ss_pred             CCCCCCChHHHHHHhccC
Q 041793          164 HPKDRPSMPSVILMLGSE  181 (224)
Q Consensus       164 dp~~Rps~~~v~~~L~~~  181 (224)
                      +|++||++++|++.|++.
T Consensus       248 ~p~~Rp~~~~vl~~~~~~  265 (267)
T cd08228         248 DPDQRPDIGYVHQIAKQM  265 (267)
T ss_pred             CcccCcCHHHHHHHHHHh
Confidence            999999999999999765


No 122
>cd05036 PTKc_ALK_LTK Catalytic domain of the Protein Tyrosine Kinases, Anaplastic Lymphoma Kinase and Leukocyte Tyrosine Kinase. Protein Tyrosine Kinase (PTK) family; Anaplastic Lymphoma Kinase (ALK) and Leukocyte Tyrosine (tyr) Kinase (LTK); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyr residues in protein substrates. ALK and LTK are orphan receptor tyr kinases (RTKs) whose ligands are not yet well-defined. RTKs contain an extracellular ligand-binding domain, a transmembrane region, and an intracellular tyr kinase domain. They are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. ALK appears to play an important role in mammalian neural development as well
Probab=99.95  E-value=5.6e-28  Score=192.51  Aligned_cols=162  Identities=28%  Similarity=0.395  Sum_probs=120.2

Q ss_pred             CCCChHHHHHHHHHHHHHHhhhhcCCCCceEecCCCCCceEECCCC---CceEeeecceeecCCCCCCCccccccccccc
Q 041793            5 KILDWPKRFHIICGTARGVMYLHQDSRLRIIHRDLKASNVLLDQDM---NPKISDFGLARAFGGDEIEGNTNRVIGTYGY   81 (224)
Q Consensus         5 ~~l~~~~~~~i~~qi~~~l~~Lh~~~~~~i~H~dl~~~nil~~~~~---~~kl~df~~~~~~~~~~~~~~~~~~~~~~~y   81 (224)
                      ..+++.+++.++.||+.||+|||+.+   ++|+||+|+||+++.++   .++|+|||++.................+..|
T Consensus       111 ~~~~~~~~~~~~~qi~~~l~~LH~~~---ivH~dlkp~nil~~~~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y  187 (277)
T cd05036         111 SSLTMKDLLFCARDVAKGCKYLEENH---FIHRDIAARNCLLTCKGPGRVAKIADFGMARDIYRASYYRKGGRAMLPIKW  187 (277)
T ss_pred             CCCCHHHHHHHHHHHHHHHHHHHHCC---EeecccchheEEEeccCCCcceEeccCccccccCCccceecCCCCCccHhh
Confidence            36899999999999999999999999   99999999999998665   5899999998765322111111122334679


Q ss_pred             CCcccccCCCcccccceEehhHHHHHHHh-cccCCCCcCCCcccccccccCCCccccCccccCCcCHHHHHHHHHHHHHh
Q 041793           82 MAPEYASDGKFSVKSDVFSFGILLLEIIS-GKKNRGFYHSDNKLNLIGHVSMPSQLIDPCIQGSFNLVEVIRCIHIGLLC  160 (224)
Q Consensus        82 ~aPE~~~~~~~~~~~Di~slG~il~~l~~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~c  160 (224)
                      +|||.+.+..++.++|||||||++++|++ |..||...........+....   . .  ......    ...+.+++.+|
T Consensus       188 ~aPE~~~~~~~~~~~DiwslG~il~el~~~g~~pf~~~~~~~~~~~~~~~~---~-~--~~~~~~----~~~~~~~i~~c  257 (277)
T cd05036         188 MPPEAFLDGIFTSKTDVWSFGVLLWEIFSLGYMPYPGRTNQEVMEFVTGGG---R-L--DPPKGC----PGPVYRIMTDC  257 (277)
T ss_pred             CCHHHHhcCCcCchhHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHHcCC---c-C--CCCCCC----CHHHHHHHHHH
Confidence            99999988889999999999999999996 888876433322221111111   0 0  001111    13467899999


Q ss_pred             ccCCCCCCCChHHHHHHhc
Q 041793          161 VQQHPKDRPSMPSVILMLG  179 (224)
Q Consensus       161 l~~dp~~Rps~~~v~~~L~  179 (224)
                      |+.+|++||++.+|++.|+
T Consensus       258 l~~~p~~Rps~~~vl~~l~  276 (277)
T cd05036         258 WQHTPEDRPNFATILERIQ  276 (277)
T ss_pred             cCCCcccCcCHHHHHHHhh
Confidence            9999999999999999885


No 123
>cd05595 STKc_PKB_beta Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B beta. Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, beta (or Akt2) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-beta is the predominant PKB isoform expressed in insulin-responsive tissues. It plays a critical role in the regulation of glucose homeostasis. It is also implicated in muscle cell differentiation. Mice deficient in
Probab=99.95  E-value=4.5e-28  Score=197.35  Aligned_cols=157  Identities=21%  Similarity=0.327  Sum_probs=120.1

Q ss_pred             CCCCChHHHHHHHHHHHHHHhhhhcCCCCceEecCCCCCceEECCCCCceEeeecceeecCCCCCCCcccccccccccCC
Q 041793            4 CKILDWPKRFHIICGTARGVMYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDEIEGNTNRVIGTYGYMA   83 (224)
Q Consensus         4 ~~~l~~~~~~~i~~qi~~~l~~Lh~~~~~~i~H~dl~~~nil~~~~~~~kl~df~~~~~~~~~~~~~~~~~~~~~~~y~a   83 (224)
                      .+.+++..++.++.||+.||.|||+.|   |+||||||+||+++.++.++|+|||++.......  .......|+..|+|
T Consensus        89 ~~~~~~~~~~~~~~qi~~aL~~LH~~~---ivH~Dlkp~NIll~~~~~~kL~Dfg~~~~~~~~~--~~~~~~~gt~~y~a  163 (323)
T cd05595          89 ERVFTEERARFYGAEIVSALEYLHSRD---VVYRDIKLENLMLDKDGHIKITDFGLCKEGISDG--ATMKTFCGTPEYLA  163 (323)
T ss_pred             cCCCCHHHHHHHHHHHHHHHHHHHHCC---eEecCCCHHHEEEcCCCCEEecccHHhccccCCC--CccccccCCcCcCC
Confidence            457899999999999999999999999   9999999999999999999999999987532211  11223467889999


Q ss_pred             cccccCCCcccccceEehhHHHHHHHhcccCCCCcCCCcccccccccCCCccccCccccCCcCHHHHHHHHHHHHHhccC
Q 041793           84 PEYASDGKFSVKSDVFSFGILLLEIISGKKNRGFYHSDNKLNLIGHVSMPSQLIDPCIQGSFNLVEVIRCIHIGLLCVQQ  163 (224)
Q Consensus        84 PE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~  163 (224)
                      ||.+.+..++.++|+|||||++|+|++|+.||..........   ........    .+...+    ..+.+++.+||+.
T Consensus       164 PE~~~~~~~~~~~DiwSlGvil~ell~g~~Pf~~~~~~~~~~---~~~~~~~~----~p~~~~----~~~~~li~~~L~~  232 (323)
T cd05595         164 PEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHERLFE---LILMEEIR----FPRTLS----PEAKSLLAGLLKK  232 (323)
T ss_pred             cccccCCCCCchhchhhhHHHHHHHHhCCCCCCCCCHHHHHH---HHhcCCCC----CCCCCC----HHHHHHHHHHccC
Confidence            999998889999999999999999999999986433221111   11111110    111111    2456888899999


Q ss_pred             CCCCCC-----ChHHHHH
Q 041793          164 HPKDRP-----SMPSVIL  176 (224)
Q Consensus       164 dp~~Rp-----s~~~v~~  176 (224)
                      ||++||     ++.++++
T Consensus       233 dP~~R~~~~~~~~~~~l~  250 (323)
T cd05595         233 DPKQRLGGGPSDAKEVME  250 (323)
T ss_pred             CHHHhCCCCCCCHHHHHc
Confidence            999998     7888865


No 124
>cd05589 STKc_PKN Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase N. Serine/Threonine Kinases (STKs), Protein Kinase N (PKN) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKN subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKN has a C-terminal catalytic domain that is highly homologous to PKCs. Its unique N-terminal regulatory region contains antiparallel coiled-coil (ACC) domains. In mammals, there are three PKN isoforms from different genes (designated PKN-alpha, beta, and gamma), which show different enzymatic properties, tissue distribution, and varied functions. PKN can be activated by the small GTPase Rho, and by fatty acids such as arachidonic and linoleic acids. It is involved 
Probab=99.95  E-value=2.1e-27  Score=193.48  Aligned_cols=158  Identities=24%  Similarity=0.352  Sum_probs=119.5

Q ss_pred             CCCCChHHHHHHHHHHHHHHhhhhcCCCCceEecCCCCCceEECCCCCceEeeecceeecCCCCCCCcccccccccccCC
Q 041793            4 CKILDWPKRFHIICGTARGVMYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDEIEGNTNRVIGTYGYMA   83 (224)
Q Consensus         4 ~~~l~~~~~~~i~~qi~~~l~~Lh~~~~~~i~H~dl~~~nil~~~~~~~kl~df~~~~~~~~~~~~~~~~~~~~~~~y~a   83 (224)
                      .+.+++.+++.++.||+.||.|||+.|   ++||||||+||+++.++.+||+|||++......  ........++..|+|
T Consensus        95 ~~~l~~~~~~~~~~qi~~al~~lH~~~---ivHrdlkp~Nill~~~~~~kL~Dfg~~~~~~~~--~~~~~~~~g~~~y~a  169 (324)
T cd05589          95 TDVFSEPRAVFYAACVVLGLQYLHENK---IVYRDLKLDNLLLDTEGFVKIADFGLCKEGMGF--GDRTSTFCGTPEFLA  169 (324)
T ss_pred             cCCCCHHHHHHHHHHHHHHHHHHHhCC---eEecCCCHHHeEECCCCcEEeCcccCCccCCCC--CCcccccccCccccC
Confidence            357899999999999999999999999   999999999999999999999999988643221  111233567889999


Q ss_pred             cccccCCCcccccceEehhHHHHHHHhcccCCCCcCCCcccccccccCCCccccCccccCCcCHHHHHHHHHHHHHhccC
Q 041793           84 PEYASDGKFSVKSDVFSFGILLLEIISGKKNRGFYHSDNKLNLIGHVSMPSQLIDPCIQGSFNLVEVIRCIHIGLLCVQQ  163 (224)
Q Consensus        84 PE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~  163 (224)
                      ||.+.+..++.++|+|||||++|+|++|+.||...........+   .......    +...+    ..+.+++.+||+.
T Consensus       170 PE~~~~~~~~~~~DiwslG~il~el~~G~~pf~~~~~~~~~~~i---~~~~~~~----p~~~~----~~~~~li~~~L~~  238 (324)
T cd05589         170 PEVLTETSYTRAVDWWGLGVLIYEMLVGESPFPGDDEEEVFDSI---VNDEVRY----PRFLS----REAISIMRRLLRR  238 (324)
T ss_pred             HhHhcCCCCCcccchhhHHHHHHHHHhCCCCCCCCCHHHHHHHH---HhCCCCC----CCCCC----HHHHHHHHHHhhc
Confidence            99999888999999999999999999999998653322211111   1000001    11111    2456789999999


Q ss_pred             CCCCCC-----ChHHHHHH
Q 041793          164 HPKDRP-----SMPSVILM  177 (224)
Q Consensus       164 dp~~Rp-----s~~~v~~~  177 (224)
                      ||++||     ++.++++.
T Consensus       239 dP~~R~~~~~~~~~~l~~~  257 (324)
T cd05589         239 NPERRLGSGEKDAEDVKKQ  257 (324)
T ss_pred             CHhHcCCCCCCCHHHHhhC
Confidence            999999     56666553


No 125
>PLN00034 mitogen-activated protein kinase kinase; Provisional
Probab=99.95  E-value=8e-28  Score=198.12  Aligned_cols=160  Identities=28%  Similarity=0.405  Sum_probs=117.2

Q ss_pred             CCChHHHHHHHHHHHHHHhhhhcCCCCceEecCCCCCceEECCCCCceEeeecceeecCCCCCCCcccccccccccCCcc
Q 041793            6 ILDWPKRFHIICGTARGVMYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDEIEGNTNRVIGTYGYMAPE   85 (224)
Q Consensus         6 ~l~~~~~~~i~~qi~~~l~~Lh~~~~~~i~H~dl~~~nil~~~~~~~kl~df~~~~~~~~~~~~~~~~~~~~~~~y~aPE   85 (224)
                      .+++..++.++.||+.||.|||+.|   |+|||||++||+++.++.+||+|||++........  ......|+..|+|||
T Consensus       164 ~~~~~~~~~i~~qi~~aL~~LH~~~---ivHrDlkp~NIll~~~~~~kL~DfG~~~~~~~~~~--~~~~~~gt~~y~aPE  238 (353)
T PLN00034        164 IADEQFLADVARQILSGIAYLHRRH---IVHRDIKPSNLLINSAKNVKIADFGVSRILAQTMD--PCNSSVGTIAYMSPE  238 (353)
T ss_pred             cCCHHHHHHHHHHHHHHHHHHHHCC---EeecCCCHHHEEEcCCCCEEEcccccceecccccc--cccccccCccccCcc
Confidence            4567788999999999999999999   99999999999999999999999999886543211  122346788999999


Q ss_pred             cccCC-----CcccccceEehhHHHHHHHhcccCCCCcCCCcccccccccCCCccccCccccCCcCHHHHHHHHHHHHHh
Q 041793           86 YASDG-----KFSVKSDVFSFGILLLEIISGKKNRGFYHSDNKLNLIGHVSMPSQLIDPCIQGSFNLVEVIRCIHIGLLC  160 (224)
Q Consensus        86 ~~~~~-----~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~c  160 (224)
                      .+...     ..+.++|||||||++|+|++|+.||......+.......+.....   .......    ...+.+||.+|
T Consensus       239 ~~~~~~~~~~~~~~~~DvwslGvil~el~~g~~pf~~~~~~~~~~~~~~~~~~~~---~~~~~~~----~~~l~~li~~~  311 (353)
T PLN00034        239 RINTDLNHGAYDGYAGDIWSLGVSILEFYLGRFPFGVGRQGDWASLMCAICMSQP---PEAPATA----SREFRHFISCC  311 (353)
T ss_pred             ccccccccCcCCCcchhHHHHHHHHHHHHhCCCCCCCCCCccHHHHHHHHhccCC---CCCCCcc----CHHHHHHHHHH
Confidence            87432     234689999999999999999999873322222211111111110   0011111    23467889999


Q ss_pred             ccCCCCCCCChHHHHHH
Q 041793          161 VQQHPKDRPSMPSVILM  177 (224)
Q Consensus       161 l~~dp~~Rps~~~v~~~  177 (224)
                      |+.||++||++.||++.
T Consensus       312 l~~~P~~Rpt~~ell~h  328 (353)
T PLN00034        312 LQREPAKRWSAMQLLQH  328 (353)
T ss_pred             ccCChhhCcCHHHHhcC
Confidence            99999999999999774


No 126
>cd05105 PTKc_PDGFR_alpha Catalytic domain of the Protein Tyrosine Kinase, Platelet Derived Growth Factor Receptor alpha. Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) alpha; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR alpha is a receptor tyr kinase (RTK) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding to its ligands, the PDGFs, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. PDGFR alpha forms homodimers or heterodimers with PDGFR beta, depending on the nature of the PDGF ligand. PDGF-AA, PDGF-
Probab=99.95  E-value=6.6e-28  Score=201.36  Aligned_cols=166  Identities=30%  Similarity=0.360  Sum_probs=124.9

Q ss_pred             CCCCChHHHHHHHHHHHHHHhhhhcCCCCceEecCCCCCceEECCCCCceEeeecceeecCCCCCCCcccccccccccCC
Q 041793            4 CKILDWPKRFHIICGTARGVMYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDEIEGNTNRVIGTYGYMA   83 (224)
Q Consensus         4 ~~~l~~~~~~~i~~qi~~~l~~Lh~~~~~~i~H~dl~~~nil~~~~~~~kl~df~~~~~~~~~~~~~~~~~~~~~~~y~a   83 (224)
                      .+.+++.+++.++.||+.||.|||+.+   |+|+||||+||+++.++.++++|||++................++..|+|
T Consensus       231 ~~~l~~~~~~~~~~qi~~aL~~LH~~~---ivH~dikp~Nill~~~~~~kL~DfGla~~~~~~~~~~~~~~~~~~~~y~a  307 (400)
T cd05105         231 SEGLTTLDLLSFTYQVARGMEFLASKN---CVHRDLAARNVLLAQGKIVKICDFGLARDIMHDSNYVSKGSTFLPVKWMA  307 (400)
T ss_pred             cCCCCHHHHHHHHHHHHHHHHHHHhCC---eeCCCCChHhEEEeCCCEEEEEeCCcceeccccccccccCCcCCCcceEC
Confidence            456899999999999999999999999   99999999999999999999999999986543222112222345678999


Q ss_pred             cccccCCCcccccceEehhHHHHHHHh-cccCCCCcCCCcccccccccCCCccccCccccCCcCHHHHHHHHHHHHHhcc
Q 041793           84 PEYASDGKFSVKSDVFSFGILLLEIIS-GKKNRGFYHSDNKLNLIGHVSMPSQLIDPCIQGSFNLVEVIRCIHIGLLCVQ  162 (224)
Q Consensus        84 PE~~~~~~~~~~~Di~slG~il~~l~~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~  162 (224)
                      ||.+.+..++.++||||||+++|+|++ |..||.........  ...........   .....    ...+.+++.+||+
T Consensus       308 PE~~~~~~~~~~~DiwSlGvil~ellt~g~~P~~~~~~~~~~--~~~~~~~~~~~---~~~~~----~~~l~~li~~cl~  378 (400)
T cd05105         308 PESIFDNLYTTLSDVWSYGILLWEIFSLGGTPYPGMIVDSTF--YNKIKSGYRMA---KPDHA----TQEVYDIMVKCWN  378 (400)
T ss_pred             hhhhcCCCCCchhhHHHHHHHHHHHHHCCCCCCcccchhHHH--HHHHhcCCCCC---CCccC----CHHHHHHHHHHCc
Confidence            999988889999999999999999997 88887543222111  00000000000   01111    1346789999999


Q ss_pred             CCCCCCCChHHHHHHhccC
Q 041793          163 QHPKDRPSMPSVILMLGSE  181 (224)
Q Consensus       163 ~dp~~Rps~~~v~~~L~~~  181 (224)
                      .||++||++.+|.+.|+..
T Consensus       379 ~dP~~RPt~~~l~~~l~~l  397 (400)
T cd05105         379 SEPEKRPSFLHLSDIVESL  397 (400)
T ss_pred             cCHhHCcCHHHHHHHHHHH
Confidence            9999999999999999865


No 127
>cd07853 STKc_NLK Catalytic domain of the Serine/Threonine Kinase, Nemo-Like Kinase. Serine/Threonine Kinases (STKs), Nemo-Like Kinase (NLK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NLK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Mitogen-activated protein kinases (MAPKs) are important mediators of cellular responses to extracellular signals. NLK is an atypical MAPK that is not regulated by a MAPK kinase. It functions downstream of the MAPK kinase kinase Tak1, which also plays a role in activating the JNK and p38 MAPKs. The Tak1/NLK pathways are regulated by Wnts, a family of secreted proteins that is critical in the control of asymmetric division and cell polarity. NLK can phosphorylate transcription
Probab=99.95  E-value=2.5e-28  Score=202.46  Aligned_cols=170  Identities=24%  Similarity=0.345  Sum_probs=121.3

Q ss_pred             CCCCChHHHHHHHHHHHHHHhhhhcCCCCceEecCCCCCceEECCCCCceEeeecceeecCCCCCCCcccccccccccCC
Q 041793            4 CKILDWPKRFHIICGTARGVMYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDEIEGNTNRVIGTYGYMA   83 (224)
Q Consensus         4 ~~~l~~~~~~~i~~qi~~~l~~Lh~~~~~~i~H~dl~~~nil~~~~~~~kl~df~~~~~~~~~~~~~~~~~~~~~~~y~a   83 (224)
                      .+.+++..+..++.||+.||.|||+.|   ++||||||+||+++.++.++|+|||++......... ......++..|+|
T Consensus        97 ~~~l~~~~~~~~~~qi~~aL~~LH~~~---ivH~dlkp~Nili~~~~~~kL~Dfg~a~~~~~~~~~-~~~~~~~~~~y~a  172 (372)
T cd07853          97 PQPLSSDHVKVFLYQILRGLKYLHSAG---ILHRDIKPGNLLVNSNCVLKICDFGLARVEEPDESK-HMTQEVVTQYYRA  172 (372)
T ss_pred             CCCCCHHHHHHHHHHHHHHHHHHHhCC---eeCCCCChHHEEECCCCCEEeccccceeecccCccc-cCCCCCcCCCcCC
Confidence            467899999999999999999999999   999999999999999999999999999865432211 1222356788999


Q ss_pred             cccccCC-CcccccceEehhHHHHHHHhcccCCCCcCCCcccccccc-cCCC------------------ccccCccccC
Q 041793           84 PEYASDG-KFSVKSDVFSFGILLLEIISGKKNRGFYHSDNKLNLIGH-VSMP------------------SQLIDPCIQG  143 (224)
Q Consensus        84 PE~~~~~-~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~-~~~~------------------~~~~~~~~~~  143 (224)
                      ||.+.+. .++.++|||||||++++|++|+.||...........+.. ...+                  .....+....
T Consensus       173 PE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  252 (372)
T cd07853         173 PEILMGSRHYTSAVDIWSVGCIFAELLGRRILFQAQSPIQQLDLITDLLGTPSLEAMRSACEGARAHILRGPHKPPSLPV  252 (372)
T ss_pred             HHHHcCCCCCCcHHHHHhHHHHHHHHHcCCCCCCCCCHHHHHHHHHHHcCCCCHHHHHHhhHHHHHHHHhCCCCCCchHH
Confidence            9998764 478999999999999999999999865432221111100 0000                  0000000000


Q ss_pred             --CcCHHHHHHHHHHHHHhccCCCCCCCChHHHHHH
Q 041793          144 --SFNLVEVIRCIHIGLLCVQQHPKDRPSMPSVILM  177 (224)
Q Consensus       144 --~~~~~~~~~~~~li~~cl~~dp~~Rps~~~v~~~  177 (224)
                        .........+.+|+.+||+.||++|||+.++++.
T Consensus       253 ~~~~~~~~~~~~~~li~~mL~~dP~~R~t~~e~l~h  288 (372)
T cd07853         253 LYTLSSQATHEAVHLLCRMLVFDPDKRISAADALAH  288 (372)
T ss_pred             hcccCCCCCHHHHHHHHHhCCCChhhCcCHHHHhcC
Confidence              0000012346789999999999999999999874


No 128
>cd05148 PTKc_Srm_Brk Catalytic domain of the Protein Tyrosine Kinases, Srm and Brk. Protein Tyrosine Kinase (PTK) family; Src-related kinase lacking C-terminal regulatory tyrosine and N-terminal myristylation sites (Srm) and breast tumor kinase (Brk, also called protein tyrosine kinase 6); catalytic (c) domains. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Srm and Brk are a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases in general contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr; they are activated by autophosphorylation at the tyr kinase dom
Probab=99.95  E-value=4e-28  Score=191.43  Aligned_cols=163  Identities=33%  Similarity=0.479  Sum_probs=124.0

Q ss_pred             CCCCCChHHHHHHHHHHHHHHhhhhcCCCCceEecCCCCCceEECCCCCceEeeecceeecCCCCCCCcccccccccccC
Q 041793            3 RCKILDWPKRFHIICGTARGVMYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDEIEGNTNRVIGTYGYM   82 (224)
Q Consensus         3 ~~~~l~~~~~~~i~~qi~~~l~~Lh~~~~~~i~H~dl~~~nil~~~~~~~kl~df~~~~~~~~~~~~~~~~~~~~~~~y~   82 (224)
                      ..+.+++.+++.++.||+.||.|||+.|   ++|+||+|+||+++.++.++++|||.+..........  ....++..|+
T Consensus        97 ~~~~~~~~~~~~~~~~i~~al~~lH~~~---i~h~dl~~~nilv~~~~~~kl~d~g~~~~~~~~~~~~--~~~~~~~~~~  171 (261)
T cd05148          97 EGQVLPVASLIDMACQVAEGMAYLEEQN---SIHRDLAARNILVGEDLVCKVADFGLARLIKEDVYLS--SDKKIPYKWT  171 (261)
T ss_pred             CCCCCCHHHHHHHHHHHHHHHHHHHHCC---eeccccCcceEEEcCCceEEEccccchhhcCCccccc--cCCCCceEec
Confidence            3457899999999999999999999999   9999999999999999999999999987654322111  1223456799


Q ss_pred             CcccccCCCcccccceEehhHHHHHHHh-cccCCCCcCCCcccccccccCCCccccCccccCCcCHHHHHHHHHHHHHhc
Q 041793           83 APEYASDGKFSVKSDVFSFGILLLEIIS-GKKNRGFYHSDNKLNLIGHVSMPSQLIDPCIQGSFNLVEVIRCIHIGLLCV  161 (224)
Q Consensus        83 aPE~~~~~~~~~~~Di~slG~il~~l~~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl  161 (224)
                      +||.+.+..++.++|+||||++++++++ |..||..............   ......   ...    ....+.+++.+||
T Consensus       172 ~PE~~~~~~~~~~~DiwslG~~l~~l~~~g~~p~~~~~~~~~~~~~~~---~~~~~~---~~~----~~~~~~~~i~~~l  241 (261)
T cd05148         172 APEAASHGTFSTKSDVWSFGILLYEMFTYGQVPYPGMNNHEVYDQITA---GYRMPC---PAK----CPQEIYKIMLECW  241 (261)
T ss_pred             CHHHHccCCCCchhhHHHHHHHHHHHHcCCCCCCCcCCHHHHHHHHHh---CCcCCC---CCC----CCHHHHHHHHHHc
Confidence            9999988888999999999999999998 8888754332221111111   000000   111    1134678999999


Q ss_pred             cCCCCCCCChHHHHHHhcc
Q 041793          162 QQHPKDRPSMPSVILMLGS  180 (224)
Q Consensus       162 ~~dp~~Rps~~~v~~~L~~  180 (224)
                      +.||++|||+.++++.|+.
T Consensus       242 ~~~p~~Rpt~~~l~~~L~~  260 (261)
T cd05148         242 AAEPEDRPSFKALREELDN  260 (261)
T ss_pred             CCCchhCcCHHHHHHHHhc
Confidence            9999999999999999975


No 129
>cd05082 PTKc_Csk Catalytic domain of the Protein Tyrosine Kinase, C-terminal Src kinase. Protein Tyrosine Kinase (PTK) family; C-terminal Src kinase (Csk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk is translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk catalyzes the tyr phosphorylation of the regulatory C-terminal tail of Src kinases, re
Probab=99.95  E-value=7.3e-28  Score=189.58  Aligned_cols=158  Identities=27%  Similarity=0.344  Sum_probs=120.8

Q ss_pred             CCCChHHHHHHHHHHHHHHhhhhcCCCCceEecCCCCCceEECCCCCceEeeecceeecCCCCCCCcccccccccccCCc
Q 041793            5 KILDWPKRFHIICGTARGVMYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDEIEGNTNRVIGTYGYMAP   84 (224)
Q Consensus         5 ~~l~~~~~~~i~~qi~~~l~~Lh~~~~~~i~H~dl~~~nil~~~~~~~kl~df~~~~~~~~~~~~~~~~~~~~~~~y~aP   84 (224)
                      ..+++..++.++.||+.||.|||+.|   ++|+||+|+||+++.++.++++|||++.......     .....+..|+||
T Consensus        97 ~~~~~~~~~~~~~~i~~~l~~lH~~~---i~H~dlkp~nil~~~~~~~kl~dfg~~~~~~~~~-----~~~~~~~~y~aP  168 (256)
T cd05082          97 SVLGGDCLLKFSLDVCEAMEYLEANN---FVHRDLAARNVLVSEDNVAKVSDFGLTKEASSTQ-----DTGKLPVKWTAP  168 (256)
T ss_pred             CCCCHHHHHHHHHHHHHHHHHHHhCC---EeccccchheEEEcCCCcEEecCCccceeccccC-----CCCccceeecCH
Confidence            35889999999999999999999999   9999999999999999999999999987643221     112335579999


Q ss_pred             ccccCCCcccccceEehhHHHHHHHh-cccCCCCcCCCcccccccccCCCccccCccccCCcCHHHHHHHHHHHHHhccC
Q 041793           85 EYASDGKFSVKSDVFSFGILLLEIIS-GKKNRGFYHSDNKLNLIGHVSMPSQLIDPCIQGSFNLVEVIRCIHIGLLCVQQ  163 (224)
Q Consensus        85 E~~~~~~~~~~~Di~slG~il~~l~~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~  163 (224)
                      |.+.+..++.++|+||||+++|+|++ |+.||...........+.... ...     .....    ...+.+++.+||+.
T Consensus       169 E~~~~~~~~~~~Dv~slG~i~~~l~~~g~~p~~~~~~~~~~~~~~~~~-~~~-----~~~~~----~~~~~~li~~~l~~  238 (256)
T cd05082         169 EALREKKFSTKSDVWSFGILLWEIYSFGRVPYPRIPLKDVVPRVEKGY-KMD-----APDGC----PPVVYDVMKQCWHL  238 (256)
T ss_pred             HHHccCCCCchhhhHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHhcCC-CCC-----CCCCC----CHHHHHHHHHHhcC
Confidence            99988888999999999999999997 888875433222111111110 011     11111    13466889999999


Q ss_pred             CCCCCCChHHHHHHhcc
Q 041793          164 HPKDRPSMPSVILMLGS  180 (224)
Q Consensus       164 dp~~Rps~~~v~~~L~~  180 (224)
                      +|++|||+.++++.|+.
T Consensus       239 ~p~~Rpt~~~l~~~l~~  255 (256)
T cd05082         239 DAATRPSFLQLREQLEH  255 (256)
T ss_pred             ChhhCcCHHHHHHHHhc
Confidence            99999999999999864


No 130
>cd05570 STKc_PKC Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase C. Serine/Threonine Kinases (STKs), Protein Kinase C (PKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, classical PKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. Novel PKCs are calcium-independent, but require DAG and PS for activity, while atypical PKCs only re
Probab=99.95  E-value=4.5e-28  Score=196.89  Aligned_cols=158  Identities=25%  Similarity=0.300  Sum_probs=121.0

Q ss_pred             CCCCChHHHHHHHHHHHHHHhhhhcCCCCceEecCCCCCceEECCCCCceEeeecceeecCCCCCCCcccccccccccCC
Q 041793            4 CKILDWPKRFHIICGTARGVMYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDEIEGNTNRVIGTYGYMA   83 (224)
Q Consensus         4 ~~~l~~~~~~~i~~qi~~~l~~Lh~~~~~~i~H~dl~~~nil~~~~~~~kl~df~~~~~~~~~~~~~~~~~~~~~~~y~a   83 (224)
                      .+.+++.++..++.||+.||.|||+.+   |+|+||+|+||+++.++.++|+|||++.......  .......++..|+|
T Consensus        90 ~~~l~~~~~~~~~~qi~~~l~~LH~~~---ivH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~~--~~~~~~~g~~~y~a  164 (318)
T cd05570          90 SGRFDEPRARFYAAEIVLGLQFLHERG---IIYRDLKLDNVLLDSEGHIKIADFGMCKEGILGG--VTTSTFCGTPDYIA  164 (318)
T ss_pred             cCCCCHHHHHHHHHHHHHHHHHHHhCC---eEccCCCHHHeEECCCCcEEecccCCCeecCcCC--CcccceecCccccC
Confidence            457899999999999999999999999   9999999999999999999999999986532211  11222457889999


Q ss_pred             cccccCCCcccccceEehhHHHHHHHhcccCCCCcCCCcccccccccCCCccccCccccCCcCHHHHHHHHHHHHHhccC
Q 041793           84 PEYASDGKFSVKSDVFSFGILLLEIISGKKNRGFYHSDNKLNLIGHVSMPSQLIDPCIQGSFNLVEVIRCIHIGLLCVQQ  163 (224)
Q Consensus        84 PE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~  163 (224)
                      ||.+.+..++.++|+|||||++|+|++|+.||..........   .+.......    +...    ...+.+|+.+||+.
T Consensus       165 PE~~~~~~~~~~~DiwslGvil~~l~~G~~pf~~~~~~~~~~---~i~~~~~~~----~~~~----~~~~~~li~~~l~~  233 (318)
T cd05570         165 PEILSYQPYGPAVDWWALGVLLYEMLAGQSPFEGDDEDELFQ---SILEDEVRY----PRWL----SKEAKSILKSFLTK  233 (318)
T ss_pred             HHHhcCCCCCcchhhhhHHHHHHHHhhCCCCCCCCCHHHHHH---HHHcCCCCC----CCcC----CHHHHHHHHHHccC
Confidence            999999899999999999999999999999986433222111   111111111    1111    13467899999999


Q ss_pred             CCCCCCCh-----HHHHHH
Q 041793          164 HPKDRPSM-----PSVILM  177 (224)
Q Consensus       164 dp~~Rps~-----~~v~~~  177 (224)
                      ||++||++     .++++.
T Consensus       234 dP~~R~s~~~~~~~~ll~~  252 (318)
T cd05570         234 NPEKRLGCLPTGEQDIKGH  252 (318)
T ss_pred             CHHHcCCCCCCCHHHHhcC
Confidence            99999999     887653


No 131
>cd05608 STKc_GRK1 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 1. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK1, also called rhodopsin kinase, belongs to the visual g
Probab=99.95  E-value=8.6e-28  Score=191.85  Aligned_cols=160  Identities=26%  Similarity=0.318  Sum_probs=120.2

Q ss_pred             CCCCChHHHHHHHHHHHHHHhhhhcCCCCceEecCCCCCceEECCCCCceEeeecceeecCCCCCCCcccccccccccCC
Q 041793            4 CKILDWPKRFHIICGTARGVMYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDEIEGNTNRVIGTYGYMA   83 (224)
Q Consensus         4 ~~~l~~~~~~~i~~qi~~~l~~Lh~~~~~~i~H~dl~~~nil~~~~~~~kl~df~~~~~~~~~~~~~~~~~~~~~~~y~a   83 (224)
                      ...+++.+++.++.||+.||.|||+.+   |+|+||+|+||+++.++.++++|||++.........  .....++..|+|
T Consensus        91 ~~~l~~~~~~~~~~qi~~~l~~lH~~~---i~H~dlkp~Nili~~~~~~~l~dfg~~~~~~~~~~~--~~~~~g~~~y~a  165 (280)
T cd05608          91 NPGFPEPRACFYTAQIISGLEHLHQRR---IIYRDLKPENVLLDNDGNVRISDLGLAVELKDGQSK--TKGYAGTPGFMA  165 (280)
T ss_pred             CCCCCHHHHHHHHHHHHHHHHHHHHCC---cccCCCCHHHEEECCCCCEEEeeCccceecCCCCcc--ccccCCCcCccC
Confidence            457899999999999999999999999   999999999999999999999999998765432211  222467889999


Q ss_pred             cccccCCCcccccceEehhHHHHHHHhcccCCCCcCCCccc-ccccccCCCccccCccccCCcCHHHHHHHHHHHHHhcc
Q 041793           84 PEYASDGKFSVKSDVFSFGILLLEIISGKKNRGFYHSDNKL-NLIGHVSMPSQLIDPCIQGSFNLVEVIRCIHIGLLCVQ  162 (224)
Q Consensus        84 PE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~  162 (224)
                      ||.+.+..++.++|+||||+++|+|++|+.||......... ........ ...   .....    ....+.+++.+||+
T Consensus       166 PE~~~~~~~~~~~DvwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~-~~~---~~~~~----~~~~~~~li~~~l~  237 (280)
T cd05608         166 PELLQGEEYDFSVDYFALGVTLYEMIAARGPFRARGEKVENKELKQRILN-DSV---TYPDK----FSPASKSFCEALLA  237 (280)
T ss_pred             HHHhcCCCCCccccHHHHHHHHHHHHhCCCCCCCCCcchhHHHHHHhhcc-cCC---CCccc----CCHHHHHHHHHHhc
Confidence            99999999999999999999999999999998653322111 11111110 000   00111    12346788899999


Q ss_pred             CCCCCCC-----ChHHHHH
Q 041793          163 QHPKDRP-----SMPSVIL  176 (224)
Q Consensus       163 ~dp~~Rp-----s~~~v~~  176 (224)
                      .||++||     +++++++
T Consensus       238 ~~P~~R~~~~~~~~~~~l~  256 (280)
T cd05608         238 KDPEKRLGFRDGNCDGLRT  256 (280)
T ss_pred             CCHHHhcCCCCCCHHHHhc
Confidence            9999999     5566654


No 132
>cd05113 PTKc_Btk_Bmx Catalytic domain of the Protein Tyrosine Kinases, Bruton's tyrosine kinase and Bone marrow kinase on the X chromosome. Protein Tyrosine Kinase (PTK) family; Bruton's tyrosine kinase (Btk) and Bone marrow kinase on the X chromosome (Bmx); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Btk and Bmx (also named Etk) are members of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds 
Probab=99.95  E-value=5.6e-28  Score=190.42  Aligned_cols=161  Identities=27%  Similarity=0.391  Sum_probs=121.9

Q ss_pred             CCCChHHHHHHHHHHHHHHhhhhcCCCCceEecCCCCCceEECCCCCceEeeecceeecCCCCCCCcccccccccccCCc
Q 041793            5 KILDWPKRFHIICGTARGVMYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDEIEGNTNRVIGTYGYMAP   84 (224)
Q Consensus         5 ~~l~~~~~~~i~~qi~~~l~~Lh~~~~~~i~H~dl~~~nil~~~~~~~kl~df~~~~~~~~~~~~~~~~~~~~~~~y~aP   84 (224)
                      ..+++.+++.++.||+.||.|||+.+   ++|+||+|.||+++.++.++++|||.+......... ......++..|++|
T Consensus        95 ~~~~~~~~~~~~~~i~~~l~~lH~~~---i~H~dl~p~nili~~~~~~kl~d~g~~~~~~~~~~~-~~~~~~~~~~y~~p  170 (256)
T cd05113          95 KRFQPSQLLEMCKDVCEGMAYLESKQ---FIHRDLAARNCLVDDQGCVKVSDFGLSRYVLDDEYT-SSVGSKFPVRWSPP  170 (256)
T ss_pred             CCCCHHHHHHHHHHHHHHHHHHHhCC---eeccccCcceEEEcCCCCEEECCCccceecCCCcee-ecCCCccChhhCCH
Confidence            46899999999999999999999999   999999999999999999999999998765332111 11112345679999


Q ss_pred             ccccCCCcccccceEehhHHHHHHHh-cccCCCCcCCCcccccccccCCCccccCccccCCcCHHHHHHHHHHHHHhccC
Q 041793           85 EYASDGKFSVKSDVFSFGILLLEIIS-GKKNRGFYHSDNKLNLIGHVSMPSQLIDPCIQGSFNLVEVIRCIHIGLLCVQQ  163 (224)
Q Consensus        85 E~~~~~~~~~~~Di~slG~il~~l~~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~  163 (224)
                      |.+.+..++.++|+||||+++|+|++ |..||...........+....   ...   .....    ...+.+++.+||+.
T Consensus       171 e~~~~~~~~~~~Di~slG~~l~~l~~~g~~p~~~~~~~~~~~~~~~~~---~~~---~~~~~----~~~~~~li~~cl~~  240 (256)
T cd05113         171 EVLLYSKFSSKSDVWAFGVLMWEVYSLGKMPYERFNNSETVEKVSQGL---RLY---RPHLA----SEKVYAIMYSCWHE  240 (256)
T ss_pred             HHHhcCcccchhHHHHHHHHHHHHhcCCCCCcCcCCHHHHHHHHhcCC---CCC---CCCCC----CHHHHHHHHHHcCC
Confidence            99988888999999999999999998 888876544322211111111   000   01111    24567899999999


Q ss_pred             CCCCCCChHHHHHHhc
Q 041793          164 HPKDRPSMPSVILMLG  179 (224)
Q Consensus       164 dp~~Rps~~~v~~~L~  179 (224)
                      +|++||++.+|++.|+
T Consensus       241 ~p~~Rp~~~~ll~~~~  256 (256)
T cd05113         241 KAEERPTFQQLLSSIE  256 (256)
T ss_pred             CcccCCCHHHHHHhhC
Confidence            9999999999998764


No 133
>cd05069 PTKc_Yes Catalytic domain of the Protein Tyrosine Kinase, Yes. Protein Tyrosine Kinase (PTK) family; Yes kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Yes (or c-Yes) is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine an
Probab=99.95  E-value=1.3e-27  Score=188.59  Aligned_cols=162  Identities=31%  Similarity=0.510  Sum_probs=122.6

Q ss_pred             CCCChHHHHHHHHHHHHHHhhhhcCCCCceEecCCCCCceEECCCCCceEeeecceeecCCCCCCCcccccccccccCCc
Q 041793            5 KILDWPKRFHIICGTARGVMYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDEIEGNTNRVIGTYGYMAP   84 (224)
Q Consensus         5 ~~l~~~~~~~i~~qi~~~l~~Lh~~~~~~i~H~dl~~~nil~~~~~~~kl~df~~~~~~~~~~~~~~~~~~~~~~~y~aP   84 (224)
                      ..+++..++.++.||+.||.|||+.|   ++|+||+|.||+++.++.++|+|||++.......... .....++..|++|
T Consensus        97 ~~~~~~~~~~~~~~l~~al~~lH~~~---i~H~dl~~~Nill~~~~~~~l~dfg~~~~~~~~~~~~-~~~~~~~~~y~~P  172 (260)
T cd05069          97 KYLKLPQLVDMAAQIADGMAYIERMN---YIHRDLRAANILVGDNLVCKIADFGLARLIEDNEYTA-RQGAKFPIKWTAP  172 (260)
T ss_pred             CCCCHHHHHHHHHHHHHHHHHHHhCC---EeecccCcceEEEcCCCeEEECCCccceEccCCcccc-cCCCccchhhCCH
Confidence            45889999999999999999999999   9999999999999999999999999997654322111 1112345679999


Q ss_pred             ccccCCCcccccceEehhHHHHHHHh-cccCCCCcCCCcccccccccCCCccccCccccCCcCHHHHHHHHHHHHHhccC
Q 041793           85 EYASDGKFSVKSDVFSFGILLLEIIS-GKKNRGFYHSDNKLNLIGHVSMPSQLIDPCIQGSFNLVEVIRCIHIGLLCVQQ  163 (224)
Q Consensus        85 E~~~~~~~~~~~Di~slG~il~~l~~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~  163 (224)
                      |...+..++.++|+||||+++|++++ |..||...........+....   ..  +. ...    ....+.+++.+||..
T Consensus       173 e~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~~~~~~~~~~~~~---~~--~~-~~~----~~~~~~~li~~~l~~  242 (260)
T cd05069         173 EAALYGRFTIKSDVWSFGILLTELVTKGRVPYPGMVNREVLEQVERGY---RM--PC-PQG----CPESLHELMKLCWKK  242 (260)
T ss_pred             HHhccCCcChHHHHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHcCC---CC--CC-Ccc----cCHHHHHHHHHHccC
Confidence            99988888999999999999999999 888875433222111111110   00  00 011    123467888999999


Q ss_pred             CCCCCCChHHHHHHhcc
Q 041793          164 HPKDRPSMPSVILMLGS  180 (224)
Q Consensus       164 dp~~Rps~~~v~~~L~~  180 (224)
                      ||++||++++|++.|+.
T Consensus       243 ~p~~Rp~~~~i~~~l~~  259 (260)
T cd05069         243 DPDERPTFEYIQSFLED  259 (260)
T ss_pred             CcccCcCHHHHHHHHhc
Confidence            99999999999999864


No 134
>cd08224 STKc_Nek6_Nek7 Catalytic domain of the Protein Serine/Threonine Kinases, Never In Mitosis gene A-related kinase 6 and 7. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 6 (Nek6) and Nek7 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek6/7 subfamily is part of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek6 and Nek7 are the shortest Neks, consisting only of the catalytic domain and a very short N-terminal extension. They show distinct expression patterns and both appear to be downstream substrates of Nek9. They are required for mitotic spindle formation and cytokinesis. They may a
Probab=99.95  E-value=1.2e-27  Score=189.23  Aligned_cols=167  Identities=21%  Similarity=0.313  Sum_probs=125.8

Q ss_pred             CCCCCChHHHHHHHHHHHHHHhhhhcCCCCceEecCCCCCceEECCCCCceEeeecceeecCCCCCCCcccccccccccC
Q 041793            3 RCKILDWPKRFHIICGTARGVMYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDEIEGNTNRVIGTYGYM   82 (224)
Q Consensus         3 ~~~~l~~~~~~~i~~qi~~~l~~Lh~~~~~~i~H~dl~~~nil~~~~~~~kl~df~~~~~~~~~~~~~~~~~~~~~~~y~   82 (224)
                      .+..+++.+++.++.||+.||.|||+.|   ++|+||+|+||+++.++.++++|||++.........  .....++..|.
T Consensus        99 ~~~~~~~~~~~~~~~~l~~~l~~lh~~~---i~h~dl~p~nil~~~~~~~~l~d~~~~~~~~~~~~~--~~~~~~~~~y~  173 (267)
T cd08224          99 QKRLIPERTIWKYFVQLCSALEHMHSKR---IMHRDIKPANVFITATGVVKLGDLGLGRFFSSKTTA--AHSLVGTPYYM  173 (267)
T ss_pred             cCCCcCHHHHHHHHHHHHHHHHHHHhCC---EecCCcChhhEEECCCCcEEEeccceeeeccCCCcc--cceecCCcccc
Confidence            3466899999999999999999999999   999999999999999999999999998765433211  22245677899


Q ss_pred             CcccccCCCcccccceEehhHHHHHHHhcccCCCCcCCCcccccccccCCCccccCccccCCcCHHHHHHHHHHHHHhcc
Q 041793           83 APEYASDGKFSVKSDVFSFGILLLEIISGKKNRGFYHSDNKLNLIGHVSMPSQLIDPCIQGSFNLVEVIRCIHIGLLCVQ  162 (224)
Q Consensus        83 aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~  162 (224)
                      |||.+.+..++.++|+||||++++++++|+.||...... ...........  ...+..    .......+.+++.+||.
T Consensus       174 apE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~-~~~~~~~~~~~--~~~~~~----~~~~~~~~~~~i~~cl~  246 (267)
T cd08224         174 SPERIHENGYNFKSDIWSLGCLLYEMAALQSPFYGDKMN-LYSLCKKIEKC--DYPPLP----ADHYSEELRDLVSRCIN  246 (267)
T ss_pred             CHHHhccCCCCchhcHHHHHHHHHHHHHCCCCcccCCcc-HHHHHhhhhcC--CCCCCC----hhhcCHHHHHHHHHHcC
Confidence            999998888999999999999999999999997532211 11111111100  000000    00112356788999999


Q ss_pred             CCCCCCCChHHHHHHhccC
Q 041793          163 QHPKDRPSMPSVILMLGSE  181 (224)
Q Consensus       163 ~dp~~Rps~~~v~~~L~~~  181 (224)
                      .+|++||++.+|++.|+..
T Consensus       247 ~~p~~Rp~~~~il~~~~~~  265 (267)
T cd08224         247 PDPEKRPDISYVLQVAKEM  265 (267)
T ss_pred             CCcccCCCHHHHHHHHHHh
Confidence            9999999999999999764


No 135
>cd05064 PTKc_EphR_A10 Catalytic domain of the Protein Tyrosine Kinase, Ephrin Receptor A10. Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; EphA10 receptor; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchor
Probab=99.95  E-value=6.3e-28  Score=191.17  Aligned_cols=164  Identities=24%  Similarity=0.290  Sum_probs=121.9

Q ss_pred             CCCCChHHHHHHHHHHHHHHhhhhcCCCCceEecCCCCCceEECCCCCceEeeecceeecCCCCCCCcccccccccccCC
Q 041793            4 CKILDWPKRFHIICGTARGVMYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDEIEGNTNRVIGTYGYMA   83 (224)
Q Consensus         4 ~~~l~~~~~~~i~~qi~~~l~~Lh~~~~~~i~H~dl~~~nil~~~~~~~kl~df~~~~~~~~~~~~~~~~~~~~~~~y~a   83 (224)
                      ...+++.+++.++.||+.||+|||+.+   ++|+||+|+||+++.++.++++|||........... ......++..|+|
T Consensus       101 ~~~l~~~~~~~~~~~i~~al~~lH~~~---iiH~dikp~nili~~~~~~~l~dfg~~~~~~~~~~~-~~~~~~~~~~y~a  176 (266)
T cd05064         101 EGQLVAGQLMGMLPGLASGMKYLSEMG---YVHKGLAAHKVLVNSDLVCKISGFRRLQEDKSEAIY-TTMSGKSPVLWAA  176 (266)
T ss_pred             CCCCCHHHHHHHHHHHHHHHHHHHHCC---EeeccccHhhEEEcCCCcEEECCCcccccccccchh-cccCCCCceeecC
Confidence            357899999999999999999999999   999999999999999999999999987653221111 1111233567999


Q ss_pred             cccccCCCcccccceEehhHHHHHHHh-cccCCCCcCCCcccccccccCCCccccCccccCCcCHHHHHHHHHHHHHhcc
Q 041793           84 PEYASDGKFSVKSDVFSFGILLLEIIS-GKKNRGFYHSDNKLNLIGHVSMPSQLIDPCIQGSFNLVEVIRCIHIGLLCVQ  162 (224)
Q Consensus        84 PE~~~~~~~~~~~Di~slG~il~~l~~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~  162 (224)
                      ||.+.+..++.++|+|||||++|++++ |..||...........+....   ..+.   ....    ...+.+++.+||+
T Consensus       177 PE~~~~~~~~~~~Di~slG~~l~ell~~g~~p~~~~~~~~~~~~~~~~~---~~~~---~~~~----~~~~~~li~~c~~  246 (266)
T cd05064         177 PEAIQYHHFSSASDVWSFGIVMWEVMSYGERPYWDMSGQDVIKAVEDGF---RLPA---PRNC----PNLLHQLMLDCWQ  246 (266)
T ss_pred             HHHHhhCCccchhHHHHHHHHHHHHhcCCCCCcCcCCHHHHHHHHHCCC---CCCC---CCCC----CHHHHHHHHHHcC
Confidence            999988899999999999999999775 999975433222111111111   1111   1111    1246678899999


Q ss_pred             CCCCCCCChHHHHHHhccC
Q 041793          163 QHPKDRPSMPSVILMLGSE  181 (224)
Q Consensus       163 ~dp~~Rps~~~v~~~L~~~  181 (224)
                      .+|++||++++|.+.|...
T Consensus       247 ~~p~~RP~~~~i~~~l~~~  265 (266)
T cd05064         247 KERGERPRFSQIHSILSKM  265 (266)
T ss_pred             CCchhCCCHHHHHHHHHhh
Confidence            9999999999999998653


No 136
>cd05074 PTKc_Tyro3 Catalytic domain of the Protein Tyrosine Kinase, Tyro3. Protein Tyrosine Kinase (PTK) family; Tyro3; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyro3 (or Sky) is a member of the Axl subfamily, which is composed of receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Tyro3 is predominantly expressed in the central nervous system and the brain, and functions as a neurotrophic fac
Probab=99.95  E-value=8.9e-28  Score=190.65  Aligned_cols=163  Identities=23%  Similarity=0.322  Sum_probs=122.3

Q ss_pred             CCChHHHHHHHHHHHHHHhhhhcCCCCceEecCCCCCceEECCCCCceEeeecceeecCCCCCCCcccccccccccCCcc
Q 041793            6 ILDWPKRFHIICGTARGVMYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDEIEGNTNRVIGTYGYMAPE   85 (224)
Q Consensus         6 ~l~~~~~~~i~~qi~~~l~~Lh~~~~~~i~H~dl~~~nil~~~~~~~kl~df~~~~~~~~~~~~~~~~~~~~~~~y~aPE   85 (224)
                      .+++..++.++.||+.||+|||+.|   |+|+||+|+||+++.++.++++|||++................++..|++||
T Consensus       109 ~l~~~~~~~~~~~i~~~l~~lH~~~---i~H~dikp~nili~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe  185 (273)
T cd05074         109 TLPLQTLVRFMIDIASGMEYLSSKN---FIHRDLAARNCMLNENMTVCVADFGLSKKIYSGDYYRQGCASKLPVKWLALE  185 (273)
T ss_pred             CCCHHHHHHHHHHHHHHHHHHHhCC---EeecccchhhEEEcCCCCEEECcccccccccCCcceecCCCccCchhhcCHh
Confidence            5788999999999999999999999   9999999999999999999999999988654322111112233456799999


Q ss_pred             cccCCCcccccceEehhHHHHHHHh-cccCCCCcCCCcccccccccCCCccccCccccCCcCHHHHHHHHHHHHHhccCC
Q 041793           86 YASDGKFSVKSDVFSFGILLLEIIS-GKKNRGFYHSDNKLNLIGHVSMPSQLIDPCIQGSFNLVEVIRCIHIGLLCVQQH  164 (224)
Q Consensus        86 ~~~~~~~~~~~Di~slG~il~~l~~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~d  164 (224)
                      .+.+..++.++|+||||+++|++++ |..||........   ...+.......   ....    ....+.+++.+||+.+
T Consensus       186 ~~~~~~~~~~sDi~slG~il~el~~~g~~p~~~~~~~~~---~~~~~~~~~~~---~~~~----~~~~~~~l~~~~l~~~  255 (273)
T cd05074         186 SLADNVYTTHSDVWAFGVTMWEIMTRGQTPYAGVENSEI---YNYLIKGNRLK---QPPD----CLEDVYELMCQCWSPE  255 (273)
T ss_pred             HHhcCccchhhhhHHHHHHHHHHhhCCCCCCCCCCHHHH---HHHHHcCCcCC---CCCC----CCHHHHHHHHHHcCCC
Confidence            9988888999999999999999998 7888754332211   11111111100   0011    1235778999999999


Q ss_pred             CCCCCChHHHHHHhccC
Q 041793          165 PKDRPSMPSVILMLGSE  181 (224)
Q Consensus       165 p~~Rps~~~v~~~L~~~  181 (224)
                      |++|||+.++++.|++.
T Consensus       256 p~~Rps~~~~~~~l~~~  272 (273)
T cd05074         256 PKCRPSFQHLRDQLELI  272 (273)
T ss_pred             hhhCcCHHHHHHHHHhh
Confidence            99999999999999753


No 137
>cd05059 PTKc_Tec_like Catalytic domain of Tec-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Tyrosine kinase expressed in hepatocellular carcinoma (Tec) subfamily; catalytic (c) domain. The Tec subfamily is composed of Tec, Btk, Bmx (Etk), Itk (Tsk, Emt), Rlk (Txk), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tec kinases are cytoplasmic (or nonreceptor) tyr kinases (nRTKs) with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows
Probab=99.95  E-value=6.9e-28  Score=189.79  Aligned_cols=161  Identities=28%  Similarity=0.394  Sum_probs=121.2

Q ss_pred             CCCCChHHHHHHHHHHHHHHhhhhcCCCCceEecCCCCCceEECCCCCceEeeecceeecCCCCCCCcccccccccccCC
Q 041793            4 CKILDWPKRFHIICGTARGVMYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDEIEGNTNRVIGTYGYMA   83 (224)
Q Consensus         4 ~~~l~~~~~~~i~~qi~~~l~~Lh~~~~~~i~H~dl~~~nil~~~~~~~kl~df~~~~~~~~~~~~~~~~~~~~~~~y~a   83 (224)
                      ...+++..++.++.||+.||.|||+.|   ++|+||+|+||+++.++.++++|||.+.......... .....++..|+|
T Consensus        94 ~~~~~~~~~~~i~~qi~~~l~~lH~~~---i~H~dl~p~ni~i~~~~~~kl~dfg~~~~~~~~~~~~-~~~~~~~~~y~~  169 (256)
T cd05059          94 KGKLGTEWLLDMCSDVCEAMEYLESNG---FIHRDLAARNCLVGEDNVVKVSDFGLARYVLDDQYTS-SQGTKFPVKWAP  169 (256)
T ss_pred             ccCCCHHHHHHHHHHHHHHHHHHHHCC---cccccccHhhEEECCCCcEEECCcccceecccccccc-cCCCCCCccccC
Confidence            346899999999999999999999999   9999999999999999999999999987653321111 111123457999


Q ss_pred             cccccCCCcccccceEehhHHHHHHHh-cccCCCCcCCCcccccccccCCCccccCccccCCcCHHHHHHHHHHHHHhcc
Q 041793           84 PEYASDGKFSVKSDVFSFGILLLEIIS-GKKNRGFYHSDNKLNLIGHVSMPSQLIDPCIQGSFNLVEVIRCIHIGLLCVQ  162 (224)
Q Consensus        84 PE~~~~~~~~~~~Di~slG~il~~l~~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~  162 (224)
                      ||.+.+..++.++|+||||+++|++++ |..||...........+....   ...   .....    ...+.+++.+||+
T Consensus       170 Pe~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~~~~~~~~~~~---~~~---~~~~~----~~~~~~li~~cl~  239 (256)
T cd05059         170 PEVFDYSRFSSKSDVWSFGVLMWEVFSEGKMPYERFSNSEVVESVSAGY---RLY---RPKLA----PTEVYTIMYSCWH  239 (256)
T ss_pred             HHHhccCCCCchhhHHHHHHHHHHHhccCCCCCCCCCHHHHHHHHHcCC---cCC---CCCCC----CHHHHHHHHHHhc
Confidence            999988889999999999999999998 788886543322211111110   000   01111    2347789999999


Q ss_pred             CCCCCCCChHHHHHHh
Q 041793          163 QHPKDRPSMPSVILML  178 (224)
Q Consensus       163 ~dp~~Rps~~~v~~~L  178 (224)
                      .+|++|||+.++++.|
T Consensus       240 ~~p~~Rpt~~~~l~~l  255 (256)
T cd05059         240 EKPEDRPAFKKLLSQL  255 (256)
T ss_pred             CChhhCcCHHHHHHHh
Confidence            9999999999999887


No 138
>cd05616 STKc_cPKC_beta Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C beta. Serine/Threonine Kinases (STKs), Classical Protein Kinase C (cPKC) subfamily, beta isoforms, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. There are four cPKC isoforms, named alpha, betaI, betaII, and
Probab=99.95  E-value=7.3e-28  Score=196.06  Aligned_cols=152  Identities=28%  Similarity=0.376  Sum_probs=117.4

Q ss_pred             CCCCChHHHHHHHHHHHHHHhhhhcCCCCceEecCCCCCceEECCCCCceEeeecceeecCCCCCCCcccccccccccCC
Q 041793            4 CKILDWPKRFHIICGTARGVMYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDEIEGNTNRVIGTYGYMA   83 (224)
Q Consensus         4 ~~~l~~~~~~~i~~qi~~~l~~Lh~~~~~~i~H~dl~~~nil~~~~~~~kl~df~~~~~~~~~~~~~~~~~~~~~~~y~a   83 (224)
                      .+.+++.+++.++.||+.||.|||+.|   |+||||||+||+++.++.++|+|||++.......  .......|++.|+|
T Consensus        95 ~~~~~~~~~~~~~~qi~~aL~~LH~~~---ivHrDlkp~Nill~~~~~~kL~DfG~~~~~~~~~--~~~~~~~gt~~y~a  169 (323)
T cd05616          95 VGRFKEPHAVFYAAEIAIGLFFLHSKG---IIYRDLKLDNVMLDSEGHIKIADFGMCKENMWDG--VTTKTFCGTPDYIA  169 (323)
T ss_pred             cCCCCHHHHHHHHHHHHHHHHHHHHCC---EEecCCCHHHeEECCCCcEEEccCCCceecCCCC--CccccCCCChhhcC
Confidence            457899999999999999999999999   9999999999999999999999999987543211  11223467889999


Q ss_pred             cccccCCCcccccceEehhHHHHHHHhcccCCCCcCCCcccccccccCCCccccCccccCCcCHHHHHHHHHHHHHhccC
Q 041793           84 PEYASDGKFSVKSDVFSFGILLLEIISGKKNRGFYHSDNKLNLIGHVSMPSQLIDPCIQGSFNLVEVIRCIHIGLLCVQQ  163 (224)
Q Consensus        84 PE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~  163 (224)
                      ||.+.+..++.++|+|||||++|+|++|+.||...........+..   .....    +...    ...+.+++.+||+.
T Consensus       170 PE~~~~~~~~~~~DiwSlGvil~elltg~~Pf~~~~~~~~~~~i~~---~~~~~----p~~~----s~~~~~li~~~l~~  238 (323)
T cd05616         170 PEIIAYQPYGKSVDWWAFGVLLYEMLAGQAPFEGEDEDELFQSIME---HNVAY----PKSM----SKEAVAICKGLMTK  238 (323)
T ss_pred             HHHhcCCCCCCccchhchhHHHHHHHhCCCCCCCCCHHHHHHHHHh---CCCCC----CCcC----CHHHHHHHHHHccc
Confidence            9999998999999999999999999999999865443222211111   11000    1111    13467889999999


Q ss_pred             CCCCCCCh
Q 041793          164 HPKDRPSM  171 (224)
Q Consensus       164 dp~~Rps~  171 (224)
                      ||++|++.
T Consensus       239 ~p~~R~~~  246 (323)
T cd05616         239 HPGKRLGC  246 (323)
T ss_pred             CHHhcCCC
Confidence            99999985


No 139
>cd05098 PTKc_FGFR1 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 1. Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 1 (FGFR1); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR1 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to
Probab=99.95  E-value=4.8e-28  Score=195.68  Aligned_cols=164  Identities=29%  Similarity=0.369  Sum_probs=122.4

Q ss_pred             CCCChHHHHHHHHHHHHHHhhhhcCCCCceEecCCCCCceEECCCCCceEeeecceeecCCCCCCCcccccccccccCCc
Q 041793            5 KILDWPKRFHIICGTARGVMYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDEIEGNTNRVIGTYGYMAP   84 (224)
Q Consensus         5 ~~l~~~~~~~i~~qi~~~l~~Lh~~~~~~i~H~dl~~~nil~~~~~~~kl~df~~~~~~~~~~~~~~~~~~~~~~~y~aP   84 (224)
                      ..+++.+++.++.|++.||.|||+.|   ++|+||+|+||+++.++.++|+|||++................++..|+||
T Consensus       135 ~~l~~~~~~~~~~qi~~aL~~lH~~g---i~H~dlkp~Nill~~~~~~kL~dfg~a~~~~~~~~~~~~~~~~~~~~y~aP  211 (307)
T cd05098         135 EQLSFKDLVSCAYQVARGMEYLASKK---CIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKTTNGRLPVKWMAP  211 (307)
T ss_pred             ccCCHHHHHHHHHHHHHHHHHHHHCC---cccccccHHheEEcCCCcEEECCCcccccccccchhhccccCCCccceeCh
Confidence            45899999999999999999999999   999999999999999999999999998765322111111112234579999


Q ss_pred             ccccCCCcccccceEehhHHHHHHHh-cccCCCCcCCCcccccccccCCCccccCccccCCcCHHHHHHHHHHHHHhccC
Q 041793           85 EYASDGKFSVKSDVFSFGILLLEIIS-GKKNRGFYHSDNKLNLIGHVSMPSQLIDPCIQGSFNLVEVIRCIHIGLLCVQQ  163 (224)
Q Consensus        85 E~~~~~~~~~~~Di~slG~il~~l~~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~  163 (224)
                      |.+.+..++.++|+||||+++|+|++ |..||...........+....    ..+  .....    ...+.+|+.+||+.
T Consensus       212 E~~~~~~~~~~~DvwslG~~l~el~~~g~~p~~~~~~~~~~~~~~~~~----~~~--~~~~~----~~~~~~li~~~l~~  281 (307)
T cd05098         212 EALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVPVEELFKLLKEGH----RMD--KPSNC----TNELYMMMRDCWHA  281 (307)
T ss_pred             HHhccCCCCcHHHHHHHHHHHHHHHcCCCCCCCcCCHHHHHHHHHcCC----CCC--CCCcC----CHHHHHHHHHHccc
Confidence            99988888999999999999999998 778875433222111111111    000  00111    23566789999999


Q ss_pred             CCCCCCChHHHHHHhccC
Q 041793          164 HPKDRPSMPSVILMLGSE  181 (224)
Q Consensus       164 dp~~Rps~~~v~~~L~~~  181 (224)
                      +|++||++.+|++.|+..
T Consensus       282 ~p~~Rps~~evl~~l~~~  299 (307)
T cd05098         282 VPSQRPTFKQLVEDLDRI  299 (307)
T ss_pred             ChhhCcCHHHHHHHHHHH
Confidence            999999999999999765


No 140
>KOG4279 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.95  E-value=6.5e-28  Score=203.33  Aligned_cols=162  Identities=28%  Similarity=0.406  Sum_probs=126.5

Q ss_pred             CCCCC--ChHHHHHHHHHHHHHHhhhhcCCCCceEecCCCCCceEEC-CCCCceEeeecceeecCCCCCCCccccccccc
Q 041793            3 RCKIL--DWPKRFHIICGTARGVMYLHQDSRLRIIHRDLKASNVLLD-QDMNPKISDFGLARAFGGDEIEGNTNRVIGTY   79 (224)
Q Consensus         3 ~~~~l--~~~~~~~i~~qi~~~l~~Lh~~~~~~i~H~dl~~~nil~~-~~~~~kl~df~~~~~~~~~~~~~~~~~~~~~~   79 (224)
                      +=++|  +++++-.+-.||++||.|||++.   |+|||||-+|+++. -+|.+|++|||.+.++.  .......++.||.
T Consensus       666 kWGPlKDNEstm~fYtkQILeGLkYLHen~---IVHRDIKGDNVLvNTySGvlKISDFGTsKRLA--ginP~TETFTGTL  740 (1226)
T KOG4279|consen  666 KWGPLKDNESTMNFYTKQILEGLKYLHENK---IVHRDIKGDNVLVNTYSGVLKISDFGTSKRLA--GINPCTETFTGTL  740 (1226)
T ss_pred             ccCCCccchhHHHHHHHHHHHHhhhhhhcc---eeeccccCCcEEEeeccceEEecccccchhhc--cCCccccccccch
Confidence            34566  78888899999999999999998   99999999999996 57899999999988763  2233455688999


Q ss_pred             ccCCcccccCC--CcccccceEehhHHHHHHHhcccCCCCcCCCcccccccccCCCccccCccccCCcCHHHHHHHHHHH
Q 041793           80 GYMAPEYASDG--KFSVKSDVFSFGILLLEIISGKKNRGFYHSDNKLNLIGHVSMPSQLIDPCIQGSFNLVEVIRCIHIG  157 (224)
Q Consensus        80 ~y~aPE~~~~~--~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li  157 (224)
                      .|+|||++..+  +|..++|||||||.+.||.+|++||.......  ..+-++.+-+      .++..+.+-...+..+|
T Consensus       741 QYMAPEvIDqG~RGYG~aADIWS~GCT~vEMATGrPPF~Elgspq--AAMFkVGmyK------vHP~iPeelsaeak~Fi  812 (1226)
T KOG4279|consen  741 QYMAPEVIDQGPRGYGKAADIWSFGCTMVEMATGRPPFVELGSPQ--AAMFKVGMYK------VHPPIPEELSAEAKNFI  812 (1226)
T ss_pred             hhhChHhhccCCcCCCchhhhhhccceeEeeccCCCCeeecCChh--Hhhhhhccee------cCCCCcHHHHHHHHHHH
Confidence            99999999765  47899999999999999999999985433222  2222222211      12233333445678999


Q ss_pred             HHhccCCCCCCCChHHHHHH
Q 041793          158 LLCVQQHPKDRPSMPSVILM  177 (224)
Q Consensus       158 ~~cl~~dp~~Rps~~~v~~~  177 (224)
                      ++|+..||..||++.+++.-
T Consensus       813 lrcFepd~~~R~sA~~LL~D  832 (1226)
T KOG4279|consen  813 LRCFEPDPCDRPSAKDLLQD  832 (1226)
T ss_pred             HHHcCCCcccCccHHHhccC
Confidence            99999999999999999763


No 141
>KOG0611 consensus Predicted serine/threonine protein kinase [General function prediction only]
Probab=99.95  E-value=4.1e-28  Score=193.76  Aligned_cols=159  Identities=22%  Similarity=0.316  Sum_probs=130.4

Q ss_pred             CCCCCCChHHHHHHHHHHHHHHhhhhcCCCCceEecCCCCCceEECCCCCceEeeecceeecCCCCCCCccccccccccc
Q 041793            2 ERCKILDWPKRFHIICGTARGVMYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDEIEGNTNRVIGTYGY   81 (224)
Q Consensus         2 ~~~~~l~~~~~~~i~~qi~~~l~~Lh~~~~~~i~H~dl~~~nil~~~~~~~kl~df~~~~~~~~~~~~~~~~~~~~~~~y   81 (224)
                      ++++.|++.+..+++.||+.|+.|||.++   ++|||||.+|||+|.|+++|++|||++..+...   ...+++-|++.|
T Consensus       145 Ser~~LsErEaRhfFRQIvSAVhYCHknr---VvHRDLKLENILLD~N~NiKIADFGLSNly~~~---kfLqTFCGSPLY  218 (668)
T KOG0611|consen  145 SERGSLSEREARHFFRQIVSAVHYCHKNR---VVHRDLKLENILLDQNNNIKIADFGLSNLYADK---KFLQTFCGSPLY  218 (668)
T ss_pred             HHhccccHHHHHHHHHHHHHHHHHHhhcc---ceecccchhheeecCCCCeeeeccchhhhhccc---cHHHHhcCCccc
Confidence            35788999999999999999999999999   999999999999999999999999999877543   335567889999


Q ss_pred             CCcccccCCCcc-cccceEehhHHHHHHHhcccCCCCcCCCcccccccccCCCccccCccccCCcCHHHHHHHHHHHHHh
Q 041793           82 MAPEYASDGKFS-VKSDVFSFGILLLEIISGKKNRGFYHSDNKLNLIGHVSMPSQLIDPCIQGSFNLVEVIRCIHIGLLC  160 (224)
Q Consensus        82 ~aPE~~~~~~~~-~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~c  160 (224)
                      .+||+..|.+|. +..|.||||+++|.|+.|..||++++-......+....+...    ..+        ....-||+||
T Consensus       219 ASPEIvNG~PY~GPEVDsWsLGvLLYtLVyGtMPFDG~Dhk~lvrQIs~GaYrEP----~~P--------SdA~gLIRwm  286 (668)
T KOG0611|consen  219 ASPEIVNGTPYKGPEVDSWSLGVLLYTLVYGTMPFDGRDHKRLVRQISRGAYREP----ETP--------SDASGLIRWM  286 (668)
T ss_pred             CCccccCCCCCCCCccchhhHHHHHHHHhhcccccCCchHHHHHHHhhcccccCC----CCC--------chHHHHHHHH
Confidence            999999999986 889999999999999999999887664443333333332221    111        1234578899


Q ss_pred             ccCCCCCCCChHHHHHHh
Q 041793          161 VQQHPKDRPSMPSVILML  178 (224)
Q Consensus       161 l~~dp~~Rps~~~v~~~L  178 (224)
                      |..+|++|.|+++|....
T Consensus       287 LmVNP~RRATieDiAsHW  304 (668)
T KOG0611|consen  287 LMVNPERRATIEDIASHW  304 (668)
T ss_pred             HhcCcccchhHHHHhhhh
Confidence            999999999999998753


No 142
>cd05044 PTKc_c-ros Catalytic domain of the Protein Tyrosine Kinase, C-ros. Protein Tyrosine Kinases (PTK) family; C-ros and Drosophila Sevenless proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The proto-oncogene c-ros encodes an orphan receptor tyr kinase (RTK) with an unknown ligand. RTKs contain an extracellular ligand-binding domain, a transmembrane region, and an intracellular tyr kinase domain. RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. C-ros is expressed in embryonic cells of the kidney, intestine and lung, but disappears soon after birth. It persists only in the adult epididymis. Male
Probab=99.95  E-value=1.5e-27  Score=189.00  Aligned_cols=162  Identities=31%  Similarity=0.478  Sum_probs=121.5

Q ss_pred             CCCChHHHHHHHHHHHHHHhhhhcCCCCceEecCCCCCceEECCCC-----CceEeeecceeecCCCCCCCccccccccc
Q 041793            5 KILDWPKRFHIICGTARGVMYLHQDSRLRIIHRDLKASNVLLDQDM-----NPKISDFGLARAFGGDEIEGNTNRVIGTY   79 (224)
Q Consensus         5 ~~l~~~~~~~i~~qi~~~l~~Lh~~~~~~i~H~dl~~~nil~~~~~-----~~kl~df~~~~~~~~~~~~~~~~~~~~~~   79 (224)
                      ..+++.+++.++.||+.||+|||+.+   ++|+||+|+||+++.++     .++++|||++................++.
T Consensus       101 ~~~~~~~~~~~~~~l~~~l~~lH~~~---i~H~dl~p~nil~~~~~~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~  177 (269)
T cd05044         101 PLLTLKELLDICLDVAKGCVYLEQMH---FIHRDLAARNCLVSEKGYDADRVVKIGDFGLARDIYKSDYYRKEGEGLLPV  177 (269)
T ss_pred             ccccHHHHHHHHHHHHHHHHHHHhCC---cccCCCChheEEEecCCCCCCcceEECCcccccccccccccccCcccCCCc
Confidence            45789999999999999999999999   99999999999999877     89999999987654322211122234467


Q ss_pred             ccCCcccccCCCcccccceEehhHHHHHHHh-cccCCCCcCCCcccccccccCCCccccCccccCCcCHHHHHHHHHHHH
Q 041793           80 GYMAPEYASDGKFSVKSDVFSFGILLLEIIS-GKKNRGFYHSDNKLNLIGHVSMPSQLIDPCIQGSFNLVEVIRCIHIGL  158 (224)
Q Consensus        80 ~y~aPE~~~~~~~~~~~Di~slG~il~~l~~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~  158 (224)
                      .|+|||.+.+..++.++|+||||+++|+|++ |..||......+   ....+.......   ....    ....+.+++.
T Consensus       178 ~y~aPE~~~~~~~~~~~Dv~slG~il~ellt~g~~p~~~~~~~~---~~~~~~~~~~~~---~~~~----~~~~~~~li~  247 (269)
T cd05044         178 RWMAPESLLDGKFTTQSDVWSFGVLMWEILTLGQQPYPALNNQE---VLQHVTAGGRLQ---KPEN----CPDKIYQLMT  247 (269)
T ss_pred             cccCHHHHccCCcccchhHHHHHHHHHHHHHcCCCCCcccCHHH---HHHHHhcCCccC---Cccc----chHHHHHHHH
Confidence            8999999988889999999999999999998 888875432221   111111111100   0001    1134678999


Q ss_pred             HhccCCCCCCCChHHHHHHhc
Q 041793          159 LCVQQHPKDRPSMPSVILMLG  179 (224)
Q Consensus       159 ~cl~~dp~~Rps~~~v~~~L~  179 (224)
                      +||..+|++||++.+|++.|+
T Consensus       248 ~~l~~~p~~Rp~~~~i~~~l~  268 (269)
T cd05044         248 NCWAQDPSERPTFDRIQEILQ  268 (269)
T ss_pred             HHcCCCcccCCCHHHHHHHHh
Confidence            999999999999999999885


No 143
>cd05089 PTKc_Tie1 Catalytic domain of the Protein Tyrosine Kinase, Tie1. Protein Tyrosine Kinase (PTK) family; Tie1; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie1 is a receptor tyr kinase (RTK) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie receptors are specifically expressed in endothelial cells and hematopoietic stem cells. No specific ligand has been identified for Tie1, although the angiopoietin, Ang-1, binds to Tie1 through integrins at high concentrations.
Probab=99.95  E-value=6.4e-28  Score=194.12  Aligned_cols=163  Identities=26%  Similarity=0.348  Sum_probs=121.7

Q ss_pred             CCCChHHHHHHHHHHHHHHhhhhcCCCCceEecCCCCCceEECCCCCceEeeecceeecCCCCCCCcccccccccccCCc
Q 041793            5 KILDWPKRFHIICGTARGVMYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDEIEGNTNRVIGTYGYMAP   84 (224)
Q Consensus         5 ~~l~~~~~~~i~~qi~~~l~~Lh~~~~~~i~H~dl~~~nil~~~~~~~kl~df~~~~~~~~~~~~~~~~~~~~~~~y~aP   84 (224)
                      +.+++.+++.++.||+.||+|||+.|   ++|+||||+||+++.++.++|+|||++.......   .......+..|++|
T Consensus       114 ~~l~~~~~~~i~~qi~~al~~lH~~~---ivH~dlkp~Nill~~~~~~kl~dfg~~~~~~~~~---~~~~~~~~~~y~aP  187 (297)
T cd05089         114 STLTSQQLLQFASDVATGMQYLSEKQ---FIHRDLAARNVLVGENLASKIADFGLSRGEEVYV---KKTMGRLPVRWMAI  187 (297)
T ss_pred             CCCCHHHHHHHHHHHHHHHHHHHHCC---cccCcCCcceEEECCCCeEEECCcCCCcccccee---ccCCCCcCccccCc
Confidence            46899999999999999999999999   9999999999999999999999999986432111   11111224569999


Q ss_pred             ccccCCCcccccceEehhHHHHHHHh-cccCCCCcCCCcccccccccCCCccccCccccCCcCHHHHHHHHHHHHHhccC
Q 041793           85 EYASDGKFSVKSDVFSFGILLLEIIS-GKKNRGFYHSDNKLNLIGHVSMPSQLIDPCIQGSFNLVEVIRCIHIGLLCVQQ  163 (224)
Q Consensus        85 E~~~~~~~~~~~Di~slG~il~~l~~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~  163 (224)
                      |.+.+..++.++|+||||+++++|++ |..||......+........   ..   .......+    ..+.+|+.+||+.
T Consensus       188 E~~~~~~~~~~~DvwSlG~il~el~t~g~~pf~~~~~~~~~~~~~~~---~~---~~~~~~~~----~~~~~li~~~l~~  257 (297)
T cd05089         188 ESLNYSVYTTKSDVWSFGVLLWEIVSLGGTPYCGMTCAELYEKLPQG---YR---MEKPRNCD----DEVYELMRQCWRD  257 (297)
T ss_pred             hhhccCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHhcC---CC---CCCCCCCC----HHHHHHHHHHcCC
Confidence            99988888999999999999999997 98997543322211111100   00   00111111    3467899999999


Q ss_pred             CCCCCCChHHHHHHhccCCC
Q 041793          164 HPKDRPSMPSVILMLGSEIV  183 (224)
Q Consensus       164 dp~~Rps~~~v~~~L~~~~~  183 (224)
                      +|.+||+++++++.|.....
T Consensus       258 ~p~~Rp~~~~i~~~l~~~~~  277 (297)
T cd05089         258 RPYERPPFAQISVQLSRMLE  277 (297)
T ss_pred             ChhhCcCHHHHHHHHHHHHH
Confidence            99999999999999876543


No 144
>cd05055 PTKc_PDGFR Catalytic domain of the Protein Tyrosine Kinases, Platelet Derived Growth Factor Receptors. Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) subfamily; catalytic (c) domain. The PDGFR subfamily consists of PDGFR alpha, PDGFR beta, KIT, CSF-1R, the mammalian FLT3, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. PDGFR kinase domains are autoinhibited by their juxtamembrane regions containing tyr residues. The binding to their ligands leads to recept
Probab=99.95  E-value=1.2e-27  Score=193.09  Aligned_cols=164  Identities=30%  Similarity=0.408  Sum_probs=123.0

Q ss_pred             CCCChHHHHHHHHHHHHHHhhhhcCCCCceEecCCCCCceEECCCCCceEeeecceeecCCCCCCCcccccccccccCCc
Q 041793            5 KILDWPKRFHIICGTARGVMYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDEIEGNTNRVIGTYGYMAP   84 (224)
Q Consensus         5 ~~l~~~~~~~i~~qi~~~l~~Lh~~~~~~i~H~dl~~~nil~~~~~~~kl~df~~~~~~~~~~~~~~~~~~~~~~~y~aP   84 (224)
                      ..+++.+++.++.||+.||.|||+++   ++|+||+|+||+++.++.++++|||++................++..|+||
T Consensus       136 ~~l~~~~~~~i~~~i~~~l~~lH~~~---ivH~dlkp~Nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~y~aP  212 (302)
T cd05055         136 SFLTLEDLLSFSYQVAKGMAFLASKN---CIHRDLAARNVLLTHGKIVKICDFGLARDIMNDSNYVVKGNARLPVKWMAP  212 (302)
T ss_pred             CCCCHHHHHHHHHHHHHHHHHHHHCC---eehhhhccceEEEcCCCeEEECCCcccccccCCCceeecCCCCcccccCCH
Confidence            34899999999999999999999999   999999999999999999999999998765432211111122345679999


Q ss_pred             ccccCCCcccccceEehhHHHHHHHh-cccCCCCcCCCccc-ccccccCCCccccCccccCCcCHHHHHHHHHHHHHhcc
Q 041793           85 EYASDGKFSVKSDVFSFGILLLEIIS-GKKNRGFYHSDNKL-NLIGHVSMPSQLIDPCIQGSFNLVEVIRCIHIGLLCVQ  162 (224)
Q Consensus        85 E~~~~~~~~~~~Di~slG~il~~l~~-g~~p~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~  162 (224)
                      |.+.+..++.++|+||||+++|++++ |..||......... ...... .  .   .......    ...+.+++.+||.
T Consensus       213 E~~~~~~~~~~~DiwslGvil~el~t~g~~p~~~~~~~~~~~~~~~~~-~--~---~~~~~~~----~~~~~~li~~cl~  282 (302)
T cd05055         213 ESIFNCVYTFESDVWSYGILLWEIFSLGSNPYPGMPVDSKFYKLIKEG-Y--R---MAQPEHA----PAEIYDIMKTCWD  282 (302)
T ss_pred             hhhccCCCCcHhHHHHHHHHHHHHHhCCCCCcCCCCchHHHHHHHHcC-C--c---CCCCCCC----CHHHHHHHHHHcC
Confidence            99988889999999999999999998 88887543322111 111000 0  0   0000111    1347789999999


Q ss_pred             CCCCCCCChHHHHHHhccC
Q 041793          163 QHPKDRPSMPSVILMLGSE  181 (224)
Q Consensus       163 ~dp~~Rps~~~v~~~L~~~  181 (224)
                      .+|++||++.++++.|+..
T Consensus       283 ~~p~~Rpt~~ell~~l~~~  301 (302)
T cd05055         283 ADPLKRPTFKQIVQLIGKQ  301 (302)
T ss_pred             CCchhCcCHHHHHHHHHhh
Confidence            9999999999999998753


No 145
>cd05584 STKc_p70S6K Catalytic domain of the Protein Serine/Threonine Kinase, 70 kDa ribosomal protein S6 kinase. Serine/Threonine Kinases (STKs), 70 kDa ribosomal protein S6 kinase (p70S6K) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p70S6K subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p70S6K (or S6K) contains only one catalytic kinase domain, unlike p90 ribosomal S6 kinases (RSKs). It acts as a downstream effector of the STK mTOR (mammalian Target of Rapamycin) and plays a role in the regulation of the translation machinery during protein synthesis. p70S6K also plays a pivotal role in regulating cell size and glucose homeostasis. Its targets include S6, the translation initiation factor eIF3, and the in
Probab=99.95  E-value=1.5e-27  Score=194.25  Aligned_cols=157  Identities=22%  Similarity=0.279  Sum_probs=119.8

Q ss_pred             CCCCChHHHHHHHHHHHHHHhhhhcCCCCceEecCCCCCceEECCCCCceEeeecceeecCCCCCCCcccccccccccCC
Q 041793            4 CKILDWPKRFHIICGTARGVMYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDEIEGNTNRVIGTYGYMA   83 (224)
Q Consensus         4 ~~~l~~~~~~~i~~qi~~~l~~Lh~~~~~~i~H~dl~~~nil~~~~~~~kl~df~~~~~~~~~~~~~~~~~~~~~~~y~a   83 (224)
                      .+.+.+..+..++.||+.||.|||+.|   |+||||||+||+++.++.++|+|||++.......  .......++..|+|
T Consensus        94 ~~~~~~~~~~~~~~qi~~~l~~lH~~~---ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~--~~~~~~~gt~~y~a  168 (323)
T cd05584          94 EGIFMEDTACFYLSEISLALEHLHQQG---IIYRDLKPENILLDAQGHVKLTDFGLCKESIHEG--TVTHTFCGTIEYMA  168 (323)
T ss_pred             cCCCCHHHHHHHHHHHHHHHHHHHHCC---eecCCCCHHHeEECCCCCEEEeeCcCCeecccCC--CcccccCCCccccC
Confidence            456788899999999999999999999   9999999999999999999999999987542221  11223467889999


Q ss_pred             cccccCCCcccccceEehhHHHHHHHhcccCCCCcCCCcccccccccCCCccccCccccCCcCHHHHHHHHHHHHHhccC
Q 041793           84 PEYASDGKFSVKSDVFSFGILLLEIISGKKNRGFYHSDNKLNLIGHVSMPSQLIDPCIQGSFNLVEVIRCIHIGLLCVQQ  163 (224)
Q Consensus        84 PE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~  163 (224)
                      ||.+.+..++.++||||||+++|+|++|+.||..........   .+......    .+...+    ..+.+++.+||+.
T Consensus       169 PE~~~~~~~~~~~DiwslG~il~ell~G~~pf~~~~~~~~~~---~~~~~~~~----~~~~~~----~~~~~li~~~l~~  237 (323)
T cd05584         169 PEILMRSGHGKAVDWWSLGALMYDMLTGAPPFTAENRKKTID---KILKGKLN----LPPYLT----PEARDLLKKLLKR  237 (323)
T ss_pred             hhhccCCCCCCcceecccHHHHHHHhcCCCCCCCCCHHHHHH---HHHcCCCC----CCCCCC----HHHHHHHHHHccc
Confidence            999988888999999999999999999999986533221111   11111100    111111    2467889999999


Q ss_pred             CCCCCC-----ChHHHHH
Q 041793          164 HPKDRP-----SMPSVIL  176 (224)
Q Consensus       164 dp~~Rp-----s~~~v~~  176 (224)
                      ||++||     +++++++
T Consensus       238 ~p~~R~~~~~~~~~~l~~  255 (323)
T cd05584         238 NPSSRLGAGPGDAAEVQS  255 (323)
T ss_pred             CHhHcCCCCCCCHHHHhc
Confidence            999999     7888866


No 146
>cd05587 STKc_cPKC Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C. Serine/Threonine Kinases (STKs), Classical (or Conventional) Protein Kinase C (cPKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. cPKCs contain a calcium-binding C2 region in their regulatory
Probab=99.95  E-value=9e-28  Score=195.61  Aligned_cols=152  Identities=27%  Similarity=0.375  Sum_probs=116.8

Q ss_pred             CCCCChHHHHHHHHHHHHHHhhhhcCCCCceEecCCCCCceEECCCCCceEeeecceeecCCCCCCCcccccccccccCC
Q 041793            4 CKILDWPKRFHIICGTARGVMYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDEIEGNTNRVIGTYGYMA   83 (224)
Q Consensus         4 ~~~l~~~~~~~i~~qi~~~l~~Lh~~~~~~i~H~dl~~~nil~~~~~~~kl~df~~~~~~~~~~~~~~~~~~~~~~~y~a   83 (224)
                      .+.+++.+++.++.||+.||.|||+.|   |+||||||+||+++.++.++|+|||++.......  .......|+..|+|
T Consensus        95 ~~~~~~~~~~~~~~qi~~al~~lH~~~---ivH~dlkp~Nill~~~~~~kL~Dfg~~~~~~~~~--~~~~~~~gt~~y~a  169 (324)
T cd05587          95 VGKFKEPHAVFYAAEIAIGLFFLHSKG---IIYRDLKLDNVMLDAEGHIKIADFGMCKENIFGG--KTTRTFCGTPDYIA  169 (324)
T ss_pred             cCCCCHHHHHHHHHHHHHHHHHHHHCC---eEecCCCHHHeEEcCCCCEEEeecCcceecCCCC--CceeeecCCccccC
Confidence            456899999999999999999999999   9999999999999999999999999986532211  11223467889999


Q ss_pred             cccccCCCcccccceEehhHHHHHHHhcccCCCCcCCCcccccccccCCCccccCccccCCcCHHHHHHHHHHHHHhccC
Q 041793           84 PEYASDGKFSVKSDVFSFGILLLEIISGKKNRGFYHSDNKLNLIGHVSMPSQLIDPCIQGSFNLVEVIRCIHIGLLCVQQ  163 (224)
Q Consensus        84 PE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~  163 (224)
                      ||.+.+..++.++|+|||||++|+|++|+.||...........+...   ..    ..+...+    ..+.+++.+||+.
T Consensus       170 PE~~~~~~~~~~~DiwslGvil~elltG~~pf~~~~~~~~~~~i~~~---~~----~~~~~~~----~~~~~li~~~l~~  238 (324)
T cd05587         170 PEIIAYQPYGKSVDWWAFGVLLYEMLAGQPPFDGEDEDELFQSIMEH---NV----SYPKSLS----KEAVSICKGLLTK  238 (324)
T ss_pred             hhhhcCCCCCcccchhhhHHHHHHHHhCCCCCCCCCHHHHHHHHHcC---CC----CCCCCCC----HHHHHHHHHHhhc
Confidence            99999888999999999999999999999998654322221111110   00    0111111    2467888999999


Q ss_pred             CCCCCCCh
Q 041793          164 HPKDRPSM  171 (224)
Q Consensus       164 dp~~Rps~  171 (224)
                      ||.+|++.
T Consensus       239 ~P~~R~~~  246 (324)
T cd05587         239 HPAKRLGC  246 (324)
T ss_pred             CHHHcCCC
Confidence            99999986


No 147
>PHA03209 serine/threonine kinase US3; Provisional
Probab=99.95  E-value=9.8e-28  Score=197.90  Aligned_cols=107  Identities=29%  Similarity=0.385  Sum_probs=91.8

Q ss_pred             CCCCCChHHHHHHHHHHHHHHhhhhcCCCCceEecCCCCCceEECCCCCceEeeecceeecCCCCCCCcccccccccccC
Q 041793            3 RCKILDWPKRFHIICGTARGVMYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDEIEGNTNRVIGTYGYM   82 (224)
Q Consensus         3 ~~~~l~~~~~~~i~~qi~~~l~~Lh~~~~~~i~H~dl~~~nil~~~~~~~kl~df~~~~~~~~~~~~~~~~~~~~~~~y~   82 (224)
                      ..+.+++.+++.++.||+.||.|||+.|   |+||||||+||+++.++.++|+|||++......   .......++..|+
T Consensus       150 ~~~~~~~~~~~~i~~qi~~aL~~LH~~~---ivHrDlkp~Nill~~~~~~kl~DfG~a~~~~~~---~~~~~~~gt~~y~  223 (357)
T PHA03209        150 RSRPLPIDQALIIEKQILEGLRYLHAQR---IIHRDVKTENIFINDVDQVCIGDLGAAQFPVVA---PAFLGLAGTVETN  223 (357)
T ss_pred             ccCCCCHHHHHHHHHHHHHHHHHHHHCC---eecCCCCHHHEEECCCCCEEEecCccccccccC---ccccccccccccc
Confidence            3567899999999999999999999999   999999999999999999999999998753221   1122345788999


Q ss_pred             CcccccCCCcccccceEehhHHHHHHHhcccCC
Q 041793           83 APEYASDGKFSVKSDVFSFGILLLEIISGKKNR  115 (224)
Q Consensus        83 aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~  115 (224)
                      |||.+.+..++.++|+|||||++|+|+++..++
T Consensus       224 aPE~~~~~~~~~~~DiwSlGvvl~ell~~~~~~  256 (357)
T PHA03209        224 APEVLARDKYNSKADIWSAGIVLFEMLAYPSTI  256 (357)
T ss_pred             CCeecCCCCCCchhhHHHHHHHHHHHHHcCCcc
Confidence            999999888999999999999999999865443


No 148
>cd05067 PTKc_Lck_Blk Catalytic domain of the Protein Tyrosine Kinases, Lymphocyte-specific kinase and Blk. Protein Tyrosine Kinase (PTK) family; Lck and Blk kinases; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Lck (lymphocyte-specific kinase) and Blk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Sr
Probab=99.95  E-value=2.2e-27  Score=187.33  Aligned_cols=163  Identities=28%  Similarity=0.428  Sum_probs=123.9

Q ss_pred             CCCCChHHHHHHHHHHHHHHhhhhcCCCCceEecCCCCCceEECCCCCceEeeecceeecCCCCCCCcccccccccccCC
Q 041793            4 CKILDWPKRFHIICGTARGVMYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDEIEGNTNRVIGTYGYMA   83 (224)
Q Consensus         4 ~~~l~~~~~~~i~~qi~~~l~~Lh~~~~~~i~H~dl~~~nil~~~~~~~kl~df~~~~~~~~~~~~~~~~~~~~~~~y~a   83 (224)
                      ...+++.+++.++.|++.||+|||+.|   ++|+||+|+||+++.++.++++|||++.......... .....++..|++
T Consensus        96 ~~~~~~~~~~~i~~~i~~al~~LH~~~---i~H~dl~p~ni~i~~~~~~~l~dfg~~~~~~~~~~~~-~~~~~~~~~y~~  171 (260)
T cd05067          96 GIKLTINKLIDMAAQIAEGMAFIERKN---YIHRDLRAANILVSETLCCKIADFGLARLIEDNEYTA-REGAKFPIKWTA  171 (260)
T ss_pred             CCCCCHHHHHHHHHHHHHHHHHHhcCC---eecccccHHhEEEcCCCCEEEccCcceeecCCCCccc-ccCCcccccccC
Confidence            457899999999999999999999999   9999999999999999999999999998764222111 112234568999


Q ss_pred             cccccCCCcccccceEehhHHHHHHHh-cccCCCCcCCCcccccccccCCCccccCccccCCcCHHHHHHHHHHHHHhcc
Q 041793           84 PEYASDGKFSVKSDVFSFGILLLEIIS-GKKNRGFYHSDNKLNLIGHVSMPSQLIDPCIQGSFNLVEVIRCIHIGLLCVQ  162 (224)
Q Consensus        84 PE~~~~~~~~~~~Di~slG~il~~l~~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~  162 (224)
                      ||.+.+..++.++|+||||++++++++ |+.||...........+....   ..   ......    ...+.+++.+||.
T Consensus       172 pe~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~~~~~~~~~~~---~~---~~~~~~----~~~~~~li~~~l~  241 (260)
T cd05067         172 PEAINYGTFTIKSDVWSFGILLTEIVTYGRIPYPGMTNPEVIQNLERGY---RM---PRPDNC----PEELYELMRLCWK  241 (260)
T ss_pred             HHHhccCCcCcccchHHHHHHHHHHHhCCCCCCCCCChHHHHHHHHcCC---CC---CCCCCC----CHHHHHHHHHHcc
Confidence            999988888999999999999999998 999986433222111111110   00   011111    1347789999999


Q ss_pred             CCCCCCCChHHHHHHhcc
Q 041793          163 QHPKDRPSMPSVILMLGS  180 (224)
Q Consensus       163 ~dp~~Rps~~~v~~~L~~  180 (224)
                      .+|++||++++++..|+.
T Consensus       242 ~~p~~Rp~~~~l~~~l~~  259 (260)
T cd05067         242 EKPEERPTFEYLRSVLED  259 (260)
T ss_pred             CChhhCCCHHHHHHHhhc
Confidence            999999999999999864


No 149
>cd05619 STKc_nPKC_theta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C theta. Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), theta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-theta is selectively expressed in T-cells and plays an important and non-redundant role in 
Probab=99.95  E-value=9.1e-28  Score=194.96  Aligned_cols=157  Identities=27%  Similarity=0.412  Sum_probs=120.1

Q ss_pred             CCCCChHHHHHHHHHHHHHHhhhhcCCCCceEecCCCCCceEECCCCCceEeeecceeecCCCCCCCcccccccccccCC
Q 041793            4 CKILDWPKRFHIICGTARGVMYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDEIEGNTNRVIGTYGYMA   83 (224)
Q Consensus         4 ~~~l~~~~~~~i~~qi~~~l~~Lh~~~~~~i~H~dl~~~nil~~~~~~~kl~df~~~~~~~~~~~~~~~~~~~~~~~y~a   83 (224)
                      .+.+++.++..++.||+.||.|||+.+   |+||||||+||+++.++.++|+|||++.......  .......++..|+|
T Consensus        90 ~~~~~~~~~~~~~~qi~~al~~LH~~~---ivHrdikp~Nil~~~~~~~kl~Dfg~~~~~~~~~--~~~~~~~gt~~y~a  164 (316)
T cd05619          90 CHKFDLPRATFYAAEIICGLQFLHSKG---IVYRDLKLDNILLDTDGHIKIADFGMCKENMLGD--AKTCTFCGTPDYIA  164 (316)
T ss_pred             cCCCCHHHHHHHHHHHHHHHHHHHhCC---eEeCCCCHHHEEECCCCCEEEccCCcceECCCCC--CceeeecCCccccC
Confidence            457899999999999999999999999   9999999999999999999999999987532211  11223457889999


Q ss_pred             cccccCCCcccccceEehhHHHHHHHhcccCCCCcCCCcccccccccCCCccccCccccCCcCHHHHHHHHHHHHHhccC
Q 041793           84 PEYASDGKFSVKSDVFSFGILLLEIISGKKNRGFYHSDNKLNLIGHVSMPSQLIDPCIQGSFNLVEVIRCIHIGLLCVQQ  163 (224)
Q Consensus        84 PE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~  163 (224)
                      ||.+.+..++.++|+|||||++|+|++|..||.......   ....+.......    +...+    ..+.+++.+||+.
T Consensus       165 PE~~~~~~~~~~~DvwslG~il~el~~G~~pf~~~~~~~---~~~~i~~~~~~~----~~~~~----~~~~~li~~~l~~  233 (316)
T cd05619         165 PEILLGQKYNTSVDWWSFGVLLYEMLIGQSPFHGHDEEE---LFQSIRMDNPCY----PRWLT----REAKDILVKLFVR  233 (316)
T ss_pred             HHHHcCCCCCchhhhhhHHHHHHHHHhCCCCCCCCCHHH---HHHHHHhCCCCC----CccCC----HHHHHHHHHHhcc
Confidence            999988889999999999999999999999986543221   111111111111    11111    2466888999999


Q ss_pred             CCCCCCChH-HHHH
Q 041793          164 HPKDRPSMP-SVIL  176 (224)
Q Consensus       164 dp~~Rps~~-~v~~  176 (224)
                      ||++||++. ++++
T Consensus       234 ~P~~R~~~~~~l~~  247 (316)
T cd05619         234 EPERRLGVKGDIRQ  247 (316)
T ss_pred             CHhhcCCChHHHHc
Confidence            999999997 5644


No 150
>cd05602 STKc_SGK1 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 1. Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3. SGK1 is ubiquitously expressed and is under transcriptional control of numerous stimuli including cell stress (cell shrinkage), serum, hormones (gluco- and mineralocorticoids), gonadotropins, growth factors, interleukin-6, and other cytokines. It plays roles in sodium retention and potassium elimination in the kidney, nutrient transport, salt 
Probab=99.95  E-value=1e-27  Score=195.34  Aligned_cols=156  Identities=22%  Similarity=0.270  Sum_probs=118.1

Q ss_pred             CCCCChHHHHHHHHHHHHHHhhhhcCCCCceEecCCCCCceEECCCCCceEeeecceeecCCCCCCCcccccccccccCC
Q 041793            4 CKILDWPKRFHIICGTARGVMYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDEIEGNTNRVIGTYGYMA   83 (224)
Q Consensus         4 ~~~l~~~~~~~i~~qi~~~l~~Lh~~~~~~i~H~dl~~~nil~~~~~~~kl~df~~~~~~~~~~~~~~~~~~~~~~~y~a   83 (224)
                      .+.+++..+..++.||+.||.|||+.|   |+||||||+||+++.++.++|+|||++.......  .......|+..|+|
T Consensus        90 ~~~~~~~~~~~~~~qi~~~L~~lH~~g---iiHrDlkp~Nili~~~~~~kl~DfG~a~~~~~~~--~~~~~~~gt~~y~a  164 (325)
T cd05602          90 ERCFLEPRARFYAAEIASALGYLHSLN---IVYRDLKPENILLDSQGHIVLTDFGLCKENIEHN--GTTSTFCGTPEYLA  164 (325)
T ss_pred             cCCCCHHHHHHHHHHHHHHHHHHHHCC---eEecCCCHHHeEECCCCCEEEccCCCCcccccCC--CCcccccCCccccC
Confidence            456788899999999999999999999   9999999999999999999999999987542211  11233467889999


Q ss_pred             cccccCCCcccccceEehhHHHHHHHhcccCCCCcCCCcccccccccCCCccccCccccCCcCHHHHHHHHHHHHHhccC
Q 041793           84 PEYASDGKFSVKSDVFSFGILLLEIISGKKNRGFYHSDNKLNLIGHVSMPSQLIDPCIQGSFNLVEVIRCIHIGLLCVQQ  163 (224)
Q Consensus        84 PE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~  163 (224)
                      ||.+.+..++.++|||||||++|+|++|..||........   ...+........    ...+    ..+.+++.+||+.
T Consensus       165 PE~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~---~~~i~~~~~~~~----~~~~----~~~~~li~~~l~~  233 (325)
T cd05602         165 PEVLHKQPYDRTVDWWCLGAVLYEMLYGLPPFYSRNTAEM---YDNILNKPLQLK----PNIT----NSARHLLEGLLQK  233 (325)
T ss_pred             HHHHcCCCCCCccccccccHHHHHHhcCCCCCCCCCHHHH---HHHHHhCCcCCC----CCCC----HHHHHHHHHHccc
Confidence            9999998899999999999999999999999864332211   111110000011    1111    2456788899999


Q ss_pred             CCCCCCChHHHH
Q 041793          164 HPKDRPSMPSVI  175 (224)
Q Consensus       164 dp~~Rps~~~v~  175 (224)
                      ||.+||++.+.+
T Consensus       234 ~p~~R~~~~~~~  245 (325)
T cd05602         234 DRTKRLGAKDDF  245 (325)
T ss_pred             CHHHCCCCCCCH
Confidence            999999987543


No 151
>KOG0596 consensus Dual specificity; serine/threonine and tyrosine kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=99.95  E-value=2.9e-28  Score=200.54  Aligned_cols=161  Identities=30%  Similarity=0.371  Sum_probs=120.3

Q ss_pred             CCCChHHHHHHHHHHHHHHhhhhcCCCCceEecCCCCCceEECCCCCceEeeecceeecCCCCCCCcccccccccccCCc
Q 041793            5 KILDWPKRFHIICGTARGVMYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDEIEGNTNRVIGTYGYMAP   84 (224)
Q Consensus         5 ~~l~~~~~~~i~~qi~~~l~~Lh~~~~~~i~H~dl~~~nil~~~~~~~kl~df~~~~~~~~~~~~~~~~~~~~~~~y~aP   84 (224)
                      +.++.-.+..+-.|++.|+.+.|+.|   |+|.||||-|+++- .|.+||.|||+|......++........||..|++|
T Consensus       455 ~~~~~~~lk~ywkqML~aV~~IH~~g---IVHSDLKPANFLlV-kG~LKLIDFGIA~aI~~DTTsI~kdsQvGT~NYMsP  530 (677)
T KOG0596|consen  455 SIDPDWFLKFYWKQMLLAVKTIHQHG---IVHSDLKPANFLLV-KGRLKLIDFGIANAIQPDTTSIVKDSQVGTVNYMSP  530 (677)
T ss_pred             CCCchHHHHHHHHHHHHHHHHHHHhc---eeecCCCcccEEEE-eeeEEeeeechhcccCccccceeeccccCcccccCH
Confidence            33443377888999999999999999   99999999998874 678999999999988877766666667899999999


Q ss_pred             ccccCC-----------CcccccceEehhHHHHHHHhcccCCCCcCCCcccccccccCCCc-cccCccccCCcCHHHHHH
Q 041793           85 EYASDG-----------KFSVKSDVFSFGILLLEIISGKKNRGFYHSDNKLNLIGHVSMPS-QLIDPCIQGSFNLVEVIR  152 (224)
Q Consensus        85 E~~~~~-----------~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~  152 (224)
                      |.+...           +.+.++||||||||+|+|+.|++||+.+...  ...+..+..+. ++.-+...   ...   .
T Consensus       531 EAl~~~~s~~~~~~~k~Ki~r~SDvWSLGCILYqMvYgktPf~~~~n~--~aKl~aI~~P~~~Iefp~~~---~~~---~  602 (677)
T KOG0596|consen  531 EALTDMSSSRENGKSKIKISRKSDVWSLGCILYQMVYGKTPFGQIINQ--IAKLHAITDPNHEIEFPDIP---END---E  602 (677)
T ss_pred             HHHhhccccccCCCcceeecCccchhhhhhHHHHHHhcCCchHHHHHH--HHHHHhhcCCCccccccCCC---Cch---H
Confidence            988432           1457899999999999999999999764421  11111111111 11111111   111   2


Q ss_pred             HHHHHHHhccCCCCCCCChHHHHHH
Q 041793          153 CIHIGLLCVQQHPKDRPSMPSVILM  177 (224)
Q Consensus       153 ~~~li~~cl~~dp~~Rps~~~v~~~  177 (224)
                      ++++|+.||++||++||++.++++.
T Consensus       603 li~~mK~CL~rdPkkR~si~eLLqh  627 (677)
T KOG0596|consen  603 LIDVMKCCLARDPKKRWSIPELLQH  627 (677)
T ss_pred             HHHHHHHHHhcCcccCCCcHHHhcC
Confidence            7788999999999999999999764


No 152
>cd05077 PTK_Jak1_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinase, Janus kinase 1. Protein Tyrosine Kinase (PTK) family; Janus kinase 1 (Jak1); pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak1 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity of the C-terminal catalytic dom
Probab=99.95  E-value=1.9e-27  Score=188.13  Aligned_cols=155  Identities=21%  Similarity=0.337  Sum_probs=115.1

Q ss_pred             CCCCChHHHHHHHHHHHHHHhhhhcCCCCceEecCCCCCceEECCCCC-------ceEeeecceeecCCCCCCCcccccc
Q 041793            4 CKILDWPKRFHIICGTARGVMYLHQDSRLRIIHRDLKASNVLLDQDMN-------PKISDFGLARAFGGDEIEGNTNRVI   76 (224)
Q Consensus         4 ~~~l~~~~~~~i~~qi~~~l~~Lh~~~~~~i~H~dl~~~nil~~~~~~-------~kl~df~~~~~~~~~~~~~~~~~~~   76 (224)
                      ...+++..++.++.||+.||+|||+.+   |+|+||+|+||+++.++.       ++++|||++......      ....
T Consensus        99 ~~~~~~~~~~~i~~qi~~~l~~lH~~~---ivH~dlkp~Nill~~~~~~~~~~~~~~l~d~g~~~~~~~~------~~~~  169 (262)
T cd05077          99 SDVLTTPWKFKVAKQLASALSYLEDKD---LVHGNVCTKNILLAREGIDGECGPFIKLSDPGIPITVLSR------QECV  169 (262)
T ss_pred             CCCCCHHHHHHHHHHHHHHHHHhhhCC---eECCCCCcccEEEecCCccCCCCceeEeCCCCCCccccCc------cccc
Confidence            456899999999999999999999999   999999999999986654       799999988654211      1234


Q ss_pred             cccccCCccccc-CCCcccccceEehhHHHHHHH-hcccCCCCcCCCcccccccccCCCccccCccccCCcCHHHHHHHH
Q 041793           77 GTYGYMAPEYAS-DGKFSVKSDVFSFGILLLEII-SGKKNRGFYHSDNKLNLIGHVSMPSQLIDPCIQGSFNLVEVIRCI  154 (224)
Q Consensus        77 ~~~~y~aPE~~~-~~~~~~~~Di~slG~il~~l~-~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  154 (224)
                      ++..|+|||.+. +..++.++||||||+++|+|+ .|..||.............   .......     . .   ...+.
T Consensus       170 ~~~~y~aPE~~~~~~~~~~~~DiwslG~~l~el~~~~~~p~~~~~~~~~~~~~~---~~~~~~~-----~-~---~~~~~  237 (262)
T cd05077         170 ERIPWIAPECVEDSKNLSIAADKWSFGTTLWEICYNGEIPLKDKTLAEKERFYE---GQCMLVT-----P-S---CKELA  237 (262)
T ss_pred             ccccccChhhhcCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCcchhHHHHHHh---cCccCCC-----C-C---hHHHH
Confidence            567899999886 456789999999999999997 5777764322211111110   0000000     0 1   13467


Q ss_pred             HHHHHhccCCCCCCCChHHHHHHhc
Q 041793          155 HIGLLCVQQHPKDRPSMPSVILMLG  179 (224)
Q Consensus       155 ~li~~cl~~dp~~Rps~~~v~~~L~  179 (224)
                      +||.+||+.||++||++.+|++.|+
T Consensus       238 ~li~~cl~~dp~~Rp~~~~il~~~~  262 (262)
T cd05077         238 DLMTHCMNYDPNQRPFFRAIMRDIN  262 (262)
T ss_pred             HHHHHHcCCChhhCcCHHHHHHhcC
Confidence            8899999999999999999998763


No 153
>cd06625 STKc_MEKK3_like Catalytic domain of MAP/ERK kinase kinase 3-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MEKK3, MEKK2, and related proteins, all containing an N-terminal PB1 domain, which mediates oligomerization, and a C-terminal catalytic domain. MEKK2 and MEKK3 are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks), proteins that phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades t
Probab=99.95  E-value=1.5e-27  Score=188.34  Aligned_cols=162  Identities=25%  Similarity=0.327  Sum_probs=120.6

Q ss_pred             CCCCChHHHHHHHHHHHHHHhhhhcCCCCceEecCCCCCceEECCCCCceEeeecceeecCCCCCCCc-ccccccccccC
Q 041793            4 CKILDWPKRFHIICGTARGVMYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDEIEGN-TNRVIGTYGYM   82 (224)
Q Consensus         4 ~~~l~~~~~~~i~~qi~~~l~~Lh~~~~~~i~H~dl~~~nil~~~~~~~kl~df~~~~~~~~~~~~~~-~~~~~~~~~y~   82 (224)
                      .+.+++..+..++.|++.||.|||+.|   ++|+||+|+||+++.++.++|+|||++........... .....++..|+
T Consensus        98 ~~~~~~~~~~~~~~~l~~~l~~lH~~~---i~H~dl~p~nilv~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~y~  174 (263)
T cd06625          98 YGALTETVTRKYTRQILEGVEYLHSNM---IVHRDIKGANILRDSAGNVKLGDFGASKRLQTICSSGTGMKSVTGTPYWM  174 (263)
T ss_pred             hCCCCHHHHHHHHHHHHHHHHHHHhCC---eecCCCCHHHEEEcCCCCEEEeecccceeccccccccccccCCCcCcccc
Confidence            356788999999999999999999999   99999999999999999999999999876533211111 12234667899


Q ss_pred             CcccccCCCcccccceEehhHHHHHHHhcccCCCCcCCCcccccccccCCCccccCccccCCcCHHHHHHHHHHHHHhcc
Q 041793           83 APEYASDGKFSVKSDVFSFGILLLEIISGKKNRGFYHSDNKLNLIGHVSMPSQLIDPCIQGSFNLVEVIRCIHIGLLCVQ  162 (224)
Q Consensus        83 aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~  162 (224)
                      |||.+.+..++.++|+||||+++|++++|+.||..................     ...+...    ...+.+++.+||.
T Consensus       175 aPE~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~-----~~~~~~~----~~~~~~li~~~l~  245 (263)
T cd06625         175 SPEVISGEGYGRKADVWSVGCTVVEMLTEKPPWAEFEAMAAIFKIATQPTN-----PQLPSHV----SPDARNFLRRTFV  245 (263)
T ss_pred             CcceeccCCCCchhhhHHHHHHHHHHHhCCCCccccchHHHHHHHhccCCC-----CCCCccC----CHHHHHHHHHHhh
Confidence            999999888899999999999999999999997543222111111000000     1111111    2346788899999


Q ss_pred             CCCCCCCChHHHHHH
Q 041793          163 QHPKDRPSMPSVILM  177 (224)
Q Consensus       163 ~dp~~Rps~~~v~~~  177 (224)
                      .+|++||++.++++.
T Consensus       246 ~~p~~Rpt~~~ll~~  260 (263)
T cd06625         246 ENAKKRPSAEELLRH  260 (263)
T ss_pred             cCcccCCCHHHHhhC
Confidence            999999999999764


No 154
>cd05582 STKc_RSK_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, 90 kDa ribosomal protein S6 kinase. Serine/Threonine Kinases (STKs), 90 kDa ribosomal protein S6 kinase (RSK) subfamily, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The RSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. RSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family. They are activated by signaling inputs from extracellular regulated kinase (ERK) and phosphoinositide dependent kinase 1 (PDK1). ERK phosphorylates and activates the CTD of RSK, serving as a docking site for PDK1, which phosphorylates and activates the NTD, which in turn phosphorylate
Probab=99.95  E-value=1.5e-27  Score=193.85  Aligned_cols=154  Identities=23%  Similarity=0.311  Sum_probs=118.0

Q ss_pred             CCCCChHHHHHHHHHHHHHHhhhhcCCCCceEecCCCCCceEECCCCCceEeeecceeecCCCCCCCcccccccccccCC
Q 041793            4 CKILDWPKRFHIICGTARGVMYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDEIEGNTNRVIGTYGYMA   83 (224)
Q Consensus         4 ~~~l~~~~~~~i~~qi~~~l~~Lh~~~~~~i~H~dl~~~nil~~~~~~~kl~df~~~~~~~~~~~~~~~~~~~~~~~y~a   83 (224)
                      ...+++..++.++.||+.||.|||+.|   |+||||||+||+++.++.++|+|||++.......  .......++..|+|
T Consensus        92 ~~~l~~~~~~~~~~qi~~~l~~lH~~~---i~H~dlkp~Nil~~~~~~~kL~Dfg~~~~~~~~~--~~~~~~~g~~~y~a  166 (318)
T cd05582          92 EVMFTEEDVKFYLAELALALDHLHSLG---IIYRDLKPENILLDEEGHIKLTDFGLSKESIDHE--KKAYSFCGTVEYMA  166 (318)
T ss_pred             cCCCCHHHHHHHHHHHHHHHHHHHHCC---EecCCCCHHHeEECCCCcEEEeeccCCcccCCCC--CceecccCChhhcC
Confidence            456899999999999999999999999   9999999999999999999999999987643321  11223467889999


Q ss_pred             cccccCCCcccccceEehhHHHHHHHhcccCCCCcCCCcccccccccCCCccccCccccCCcCHHHHHHHHHHHHHhccC
Q 041793           84 PEYASDGKFSVKSDVFSFGILLLEIISGKKNRGFYHSDNKLNLIGHVSMPSQLIDPCIQGSFNLVEVIRCIHIGLLCVQQ  163 (224)
Q Consensus        84 PE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~  163 (224)
                      ||.+.+..++.++|+|||||++|+|++|+.||...........+....  ..     .+...+    ..+.+++.+||+.
T Consensus       167 PE~~~~~~~~~~~DiwslG~il~el~tg~~p~~~~~~~~~~~~i~~~~--~~-----~p~~~~----~~~~~li~~~l~~  235 (318)
T cd05582         167 PEVVNRRGHTQSADWWSFGVLMFEMLTGSLPFQGKDRKETMTMILKAK--LG-----MPQFLS----PEAQSLLRALFKR  235 (318)
T ss_pred             HHHHcCCCCCCccceeccceEeeeeccCCCCCCCCCHHHHHHHHHcCC--CC-----CCCCCC----HHHHHHHHHHhhc
Confidence            999988888999999999999999999999986533221111111000  00     111111    2456888999999


Q ss_pred             CCCCCCChHH
Q 041793          164 HPKDRPSMPS  173 (224)
Q Consensus       164 dp~~Rps~~~  173 (224)
                      ||++||++.+
T Consensus       236 ~P~~R~~a~~  245 (318)
T cd05582         236 NPANRLGAGP  245 (318)
T ss_pred             CHhHcCCCCC
Confidence            9999999555


No 155
>cd06616 PKc_MKK4 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 4. Protein kinases (PKs), MAP kinase kinase 4 (MKK4) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK4 is a dual-specificity PK that phosphorylates and activates
Probab=99.95  E-value=8.1e-28  Score=192.47  Aligned_cols=163  Identities=28%  Similarity=0.415  Sum_probs=120.2

Q ss_pred             CCCCChHHHHHHHHHHHHHHhhhhcC-CCCceEecCCCCCceEECCCCCceEeeecceeecCCCCCCCcccccccccccC
Q 041793            4 CKILDWPKRFHIICGTARGVMYLHQD-SRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDEIEGNTNRVIGTYGYM   82 (224)
Q Consensus         4 ~~~l~~~~~~~i~~qi~~~l~~Lh~~-~~~~i~H~dl~~~nil~~~~~~~kl~df~~~~~~~~~~~~~~~~~~~~~~~y~   82 (224)
                      .+.+++..+..++.|++.||+|||+. +   ++||||+|+||+++.++.++++|||++........   .....++..|+
T Consensus       101 ~~~l~~~~~~~i~~~i~~~l~~lh~~~~---i~H~dlkp~Nil~~~~~~~kl~dfg~~~~~~~~~~---~~~~~~~~~y~  174 (288)
T cd06616         101 KSVIPEEILGKIAVATVKALNYLKEELK---IIHRDVKPSNILLDRNGNIKLCDFGISGQLVDSIA---KTRDAGCRPYM  174 (288)
T ss_pred             cCCCCHHHHHHHHHHHHHHHHHHhhcCC---eeccCCCHHHEEEccCCcEEEeecchhHHhccCCc---cccccCccCcc
Confidence            46789999999999999999999975 7   99999999999999999999999999876533211   12235677899


Q ss_pred             CcccccCC---CcccccceEehhHHHHHHHhcccCCCCcCCCcccccccccCCCccccCccccCCcCHHHHHHHHHHHHH
Q 041793           83 APEYASDG---KFSVKSDVFSFGILLLEIISGKKNRGFYHSDNKLNLIGHVSMPSQLIDPCIQGSFNLVEVIRCIHIGLL  159 (224)
Q Consensus        83 aPE~~~~~---~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~  159 (224)
                      |||.+.+.   .++.++|+||||++++++++|+.||.....  ....+..... ..  .+.............+.+|+.+
T Consensus       175 aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~--~~~~~~~~~~-~~--~~~~~~~~~~~~~~~l~~li~~  249 (288)
T cd06616         175 APERIDPSARDGYDVRSDVWSLGITLYEVATGKFPYPKWNS--VFDQLTQVVK-GD--PPILSNSEEREFSPSFVNFINL  249 (288)
T ss_pred             CHHHhccccccCCcchhhhhHHHHHHHHHHhCCCCchhcch--HHHHHhhhcC-CC--CCcCCCcCCCccCHHHHHHHHH
Confidence            99998766   578999999999999999999999865431  1111111110 00  0011111101112357789999


Q ss_pred             hccCCCCCCCChHHHHHH
Q 041793          160 CVQQHPKDRPSMPSVILM  177 (224)
Q Consensus       160 cl~~dp~~Rps~~~v~~~  177 (224)
                      ||+.||++|||+++|++.
T Consensus       250 ~l~~~p~~Rpt~~~i~~~  267 (288)
T cd06616         250 CLIKDESKRPKYKELLEH  267 (288)
T ss_pred             HccCChhhCcCHHHHhcC
Confidence            999999999999999774


No 156
>cd05088 PTKc_Tie2 Catalytic domain of the Protein Tyrosine Kinase, Tie2. Protein Tyrosine Kinase (PTK) family; Tie2; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie2 is a receptor tyr kinase (RTK) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie2 is expressed mainly in endothelial cells and hematopoietic stem cells. It is also found in a subset of tumor-associated monocytes and eosinophils. The angiopoietins (Ang-1 to Ang-4) serve as ligands for Tie2. The binding of A
Probab=99.95  E-value=1.4e-27  Score=192.80  Aligned_cols=161  Identities=27%  Similarity=0.352  Sum_probs=120.2

Q ss_pred             CCCChHHHHHHHHHHHHHHhhhhcCCCCceEecCCCCCceEECCCCCceEeeecceeecCCCCCCCcccccccccccCCc
Q 041793            5 KILDWPKRFHIICGTARGVMYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDEIEGNTNRVIGTYGYMAP   84 (224)
Q Consensus         5 ~~l~~~~~~~i~~qi~~~l~~Lh~~~~~~i~H~dl~~~nil~~~~~~~kl~df~~~~~~~~~~~~~~~~~~~~~~~y~aP   84 (224)
                      ..+++.+++.++.||+.||+|||+.|   ++||||+|+||+++.++.++|+|||++.......   .......+..|+||
T Consensus       119 ~~l~~~~~~~~~~qi~~al~~LH~~g---i~H~dlkp~Nili~~~~~~kl~dfg~~~~~~~~~---~~~~~~~~~~y~aP  192 (303)
T cd05088         119 STLSSQQLLHFAADVARGMDYLSQKQ---FIHRDLAARNILVGENYVAKIADFGLSRGQEVYV---KKTMGRLPVRWMAI  192 (303)
T ss_pred             CcCCHHHHHHHHHHHHHHHHHHHhCC---ccccccchheEEecCCCcEEeCccccCcccchhh---hcccCCCcccccCH
Confidence            46899999999999999999999999   9999999999999999999999999986421110   11112235579999


Q ss_pred             ccccCCCcccccceEehhHHHHHHHh-cccCCCCcCCCcccccccccCCCccccCccccCCcCHHHHHHHHHHHHHhccC
Q 041793           85 EYASDGKFSVKSDVFSFGILLLEIIS-GKKNRGFYHSDNKLNLIGHVSMPSQLIDPCIQGSFNLVEVIRCIHIGLLCVQQ  163 (224)
Q Consensus        85 E~~~~~~~~~~~Di~slG~il~~l~~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~  163 (224)
                      |.+.+..++.++|+||||++++++++ |..||.............     ... ........    ...+.+|+.+||+.
T Consensus       193 E~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~~~~~~~~-----~~~-~~~~~~~~----~~~~~~li~~~l~~  262 (303)
T cd05088         193 ESLNYSVYTTNSDVWSYGVLLWEIVSLGGTPYCGMTCAELYEKLP-----QGY-RLEKPLNC----DDEVYDLMRQCWRE  262 (303)
T ss_pred             HHHhccCCcccccchhhhhHHHHHHhcCCCCcccCChHHHHHHHh-----cCC-cCCCCCCC----CHHHHHHHHHHcCC
Confidence            99888888999999999999999998 999875433222111111     000 00000111    12467899999999


Q ss_pred             CCCCCCChHHHHHHhccC
Q 041793          164 HPKDRPSMPSVILMLGSE  181 (224)
Q Consensus       164 dp~~Rps~~~v~~~L~~~  181 (224)
                      +|++||++.++++.|+..
T Consensus       263 ~p~~Rp~~~~il~~l~~~  280 (303)
T cd05088         263 KPYERPSFAQILVSLNRM  280 (303)
T ss_pred             ChhhCcCHHHHHHHHHHH
Confidence            999999999999988654


No 157
>cd05063 PTKc_EphR_A2 Catalytic domain of the Protein Tyrosine Kinase, Ephrin Receptor A2. Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; EphA2 receptor; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchored 
Probab=99.95  E-value=1.7e-27  Score=188.66  Aligned_cols=165  Identities=27%  Similarity=0.381  Sum_probs=123.5

Q ss_pred             CCCCChHHHHHHHHHHHHHHhhhhcCCCCceEecCCCCCceEECCCCCceEeeecceeecCCCCCCCccc-ccccccccC
Q 041793            4 CKILDWPKRFHIICGTARGVMYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDEIEGNTN-RVIGTYGYM   82 (224)
Q Consensus         4 ~~~l~~~~~~~i~~qi~~~l~~Lh~~~~~~i~H~dl~~~nil~~~~~~~kl~df~~~~~~~~~~~~~~~~-~~~~~~~y~   82 (224)
                      .+.+++.+++.++.|++.||.|||+.|   ++|+||+|+||+++.++.++++|||++............. ....+..|+
T Consensus       101 ~~~~~~~~~~~~~~~l~~al~~lH~~~---i~H~dlkp~Nili~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~y~  177 (268)
T cd05063         101 DGEFSSYQLVGMLRGIAAGMKYLSDMN---YVHRDLAARNILVNSNLECKVSDFGLSRVLEDDPEGTYTTSGGKIPIRWT  177 (268)
T ss_pred             CCCCCHHHHHHHHHHHHHHHHHHHHCC---eeccccchhhEEEcCCCcEEECCCccceecccccccceeccCCCcCceec
Confidence            467899999999999999999999999   9999999999999999999999999987664322111111 112245699


Q ss_pred             CcccccCCCcccccceEehhHHHHHHHh-cccCCCCcCCCcccccccccCCCccccCccccCCcCHHHHHHHHHHHHHhc
Q 041793           83 APEYASDGKFSVKSDVFSFGILLLEIIS-GKKNRGFYHSDNKLNLIGHVSMPSQLIDPCIQGSFNLVEVIRCIHIGLLCV  161 (224)
Q Consensus        83 aPE~~~~~~~~~~~Di~slG~il~~l~~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl  161 (224)
                      +||.+.+..++.++|+||||+++|++++ |..||........   ...+......+..   ...    ...+.+++.+||
T Consensus       178 ~PE~~~~~~~~~~~Dv~slG~il~ell~~g~~p~~~~~~~~~---~~~i~~~~~~~~~---~~~----~~~~~~li~~c~  247 (268)
T cd05063         178 APEAIAYRKFTSASDVWSFGIVMWEVMSFGERPYWDMSNHEV---MKAINDGFRLPAP---MDC----PSAVYQLMLQCW  247 (268)
T ss_pred             CHHHhhcCCcChHhHHHHHHHHHHHHHhCCCCCCCcCCHHHH---HHHHhcCCCCCCC---CCC----CHHHHHHHHHHc
Confidence            9999988888999999999999999997 9999754332221   1111111111110   111    134678999999


Q ss_pred             cCCCCCCCChHHHHHHhccC
Q 041793          162 QQHPKDRPSMPSVILMLGSE  181 (224)
Q Consensus       162 ~~dp~~Rps~~~v~~~L~~~  181 (224)
                      +.+|++||++.+|++.|++.
T Consensus       248 ~~~p~~Rp~~~~i~~~l~~~  267 (268)
T cd05063         248 QQDRARRPRFVDIVNLLDKL  267 (268)
T ss_pred             CCCcccCcCHHHHHHHHHhh
Confidence            99999999999999999754


No 158
>cd06643 STKc_SLK Catalytic domain of the Protein Serine/Threonine Kinase, Ste20-like kinase. Serine/threonine kinases (STKs), Ste20-like kinase (SLK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SLK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. SLK promotes apoptosis through apoptosis signal-regulating kinase 1 (ASK1) and the mitogen-activated protein kinase (MAPK) p38. It acts as a MAPK kinase kinase (MAPKKK) by phosphorylating ASK1, resulting in the phosphorylation of p38. SLK also plays a role in mediating actin reorganization. It is part of a microtubule-associated complex that is targeted at adhesion sites, and is required in focal adhesion turnover and in regulating cell migration.
Probab=99.95  E-value=2.4e-27  Score=189.26  Aligned_cols=161  Identities=27%  Similarity=0.362  Sum_probs=119.4

Q ss_pred             CCCCChHHHHHHHHHHHHHHhhhhcCCCCceEecCCCCCceEECCCCCceEeeecceeecCCCCCCCcccccccccccCC
Q 041793            4 CKILDWPKRFHIICGTARGVMYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDEIEGNTNRVIGTYGYMA   83 (224)
Q Consensus         4 ~~~l~~~~~~~i~~qi~~~l~~Lh~~~~~~i~H~dl~~~nil~~~~~~~kl~df~~~~~~~~~~~~~~~~~~~~~~~y~a   83 (224)
                      .+.+++.+++.++.||+.||.|||+.|   ++|+||+|+||+++.++.++++|||++.......  .......++..|++
T Consensus        97 ~~~l~~~~~~~~~~qi~~~L~~LH~~~---i~H~dlkp~nili~~~~~~kl~dfg~~~~~~~~~--~~~~~~~~~~~y~a  171 (282)
T cd06643          97 ERPLTEPQIRVVCKQTLEALNYLHENK---IIHRDLKAGNILFTLDGDIKLADFGVSAKNTRTI--QRRDSFIGTPYWMA  171 (282)
T ss_pred             CCCCCHHHHHHHHHHHHHHHHHHHHCC---eeecCCCcccEEEccCCCEEEccccccccccccc--cccccccccccccC
Confidence            467899999999999999999999999   9999999999999999999999999987543221  11222456788999


Q ss_pred             ccccc-----CCCcccccceEehhHHHHHHHhcccCCCCcCCCcccccccccCCCccccCccccCCcCHHHHHHHHHHHH
Q 041793           84 PEYAS-----DGKFSVKSDVFSFGILLLEIISGKKNRGFYHSDNKLNLIGHVSMPSQLIDPCIQGSFNLVEVIRCIHIGL  158 (224)
Q Consensus        84 PE~~~-----~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~  158 (224)
                      ||.+.     +..++.++|+|||||++|+|++|+.||................ ......   +...    ...+.+++.
T Consensus       172 PE~~~~~~~~~~~~~~~~Dv~slGvil~el~~g~~p~~~~~~~~~~~~~~~~~-~~~~~~---~~~~----~~~~~~li~  243 (282)
T cd06643         172 PEVVMCETSKDRPYDYKADVWSLGITLIEMAQIEPPHHELNPMRVLLKIAKSE-PPTLAQ---PSRW----SSEFKDFLK  243 (282)
T ss_pred             HhhccccCCCCCCCCccchhhhHHHHHHHHccCCCCccccCHHHHHHHHhhcC-CCCCCC---cccc----CHHHHHHHH
Confidence            99874     3456789999999999999999999986543222111111110 001100   1111    134678899


Q ss_pred             HhccCCCCCCCChHHHHHH
Q 041793          159 LCVQQHPKDRPSMPSVILM  177 (224)
Q Consensus       159 ~cl~~dp~~Rps~~~v~~~  177 (224)
                      +||+.||++||++.++++.
T Consensus       244 ~~l~~~p~~Rp~~~~il~~  262 (282)
T cd06643         244 KCLEKNVDARWTTTQLLQH  262 (282)
T ss_pred             HHccCChhhCcCHHHHhcC
Confidence            9999999999999998654


No 159
>cd05041 PTKc_Fes_like Catalytic domain of Fes-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Fes subfamily; catalytic (c) domain. Fes subfamily members include Fes (or Fps), Fer, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fes subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. The genes for Fes (feline sarcoma) and Fps (Fujinami poultry sarcoma) were first isolated from tumor-causing retroviruses. The viral oncogenes encode chimeric Fes proteins consisting of Gag sequences at the N-termini, resulting in unregulated tyr k
Probab=99.95  E-value=1.3e-27  Score=187.47  Aligned_cols=163  Identities=28%  Similarity=0.350  Sum_probs=121.9

Q ss_pred             CCCCChHHHHHHHHHHHHHHhhhhcCCCCceEecCCCCCceEECCCCCceEeeecceeecCCCCCCCcccccccccccCC
Q 041793            4 CKILDWPKRFHIICGTARGVMYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDEIEGNTNRVIGTYGYMA   83 (224)
Q Consensus         4 ~~~l~~~~~~~i~~qi~~~l~~Lh~~~~~~i~H~dl~~~nil~~~~~~~kl~df~~~~~~~~~~~~~~~~~~~~~~~y~a   83 (224)
                      ...+++..++.++.+++.||.|||+++   ++|+||+|+||+++.++.++++|||.+.................+..|+|
T Consensus        87 ~~~~~~~~~~~~~~~~~~~l~~lH~~~---i~h~di~p~nili~~~~~~~l~d~g~~~~~~~~~~~~~~~~~~~~~~y~~  163 (251)
T cd05041          87 KNRLTVKKLLQMSLDAAAGMEYLESKN---CIHRDLAARNCLVGENNVLKISDFGMSREEEGGIYTVSDGLKQIPIKWTA  163 (251)
T ss_pred             CCCCCHHHHHHHHHHHHHHHHHHHhCC---EehhhcCcceEEEcCCCcEEEeeccccccccCCcceeccccCcceeccCC
Confidence            346889999999999999999999999   99999999999999999999999999876532211111111223456999


Q ss_pred             cccccCCCcccccceEehhHHHHHHHh-cccCCCCcCCCcccccccccCCCccccCccccCCcCHHHHHHHHHHHHHhcc
Q 041793           84 PEYASDGKFSVKSDVFSFGILLLEIIS-GKKNRGFYHSDNKLNLIGHVSMPSQLIDPCIQGSFNLVEVIRCIHIGLLCVQ  162 (224)
Q Consensus        84 PE~~~~~~~~~~~Di~slG~il~~l~~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~  162 (224)
                      ||.+.+..++.++|+||||++++++++ |..||...........+...   .....   ....    ...+.+++.+||+
T Consensus       164 PE~~~~~~~~~~~Di~slG~i~~~l~t~~~~p~~~~~~~~~~~~~~~~---~~~~~---~~~~----~~~~~~li~~~l~  233 (251)
T cd05041         164 PEALNYGRYTSESDVWSYGILLWETFSLGDTPYPGMSNQQTRERIESG---YRMPA---PQLC----PEEIYRLMLQCWA  233 (251)
T ss_pred             hHhhccCCCCcchhHHHHHHHHHHHHhccCCCCccCCHHHHHHHHhcC---CCCCC---CccC----CHHHHHHHHHHhc
Confidence            999988889999999999999999998 77787554332222211111   01000   1111    2357789999999


Q ss_pred             CCCCCCCChHHHHHHhc
Q 041793          163 QHPKDRPSMPSVILMLG  179 (224)
Q Consensus       163 ~dp~~Rps~~~v~~~L~  179 (224)
                      .+|++||++.++++.|.
T Consensus       234 ~~p~~Rp~~~ell~~l~  250 (251)
T cd05041         234 YDPENRPSFSEIYNELQ  250 (251)
T ss_pred             cChhhCcCHHHHHHHhh
Confidence            99999999999999885


No 160
>cd05604 STKc_SGK3 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 3. Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK3 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3 (also called cytokine-independent survival kinase CISK). SGK3 is expressed in most tissues and is most abundant in the embryo and adult heart and spleen. It was originally discovered in a screen for antiapoptotic genes. It phosphorylates and inhibits the proapoptotic proteins, Bad and FKHRL1. SGK3 also regulates many transporters, ion channels,
Probab=99.95  E-value=2.1e-27  Score=193.52  Aligned_cols=155  Identities=21%  Similarity=0.287  Sum_probs=118.3

Q ss_pred             CCCCCChHHHHHHHHHHHHHHhhhhcCCCCceEecCCCCCceEECCCCCceEeeecceeecCCCCCCCcccccccccccC
Q 041793            3 RCKILDWPKRFHIICGTARGVMYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDEIEGNTNRVIGTYGYM   82 (224)
Q Consensus         3 ~~~~l~~~~~~~i~~qi~~~l~~Lh~~~~~~i~H~dl~~~nil~~~~~~~kl~df~~~~~~~~~~~~~~~~~~~~~~~y~   82 (224)
                      +.+.+++.++..++.||+.||.|||+.|   |+||||||+||+++.++.++|+|||++.......  .......|+..|+
T Consensus        89 ~~~~~~~~~~~~~~~qi~~al~~lH~~g---ivH~Dlkp~NIll~~~~~~kL~DfG~~~~~~~~~--~~~~~~~gt~~y~  163 (325)
T cd05604          89 RERSFPEPRARFYAAEIASALGYLHSIN---IVYRDLKPENILLDSQGHVVLTDFGLCKEGIAQS--DTTTTFCGTPEYL  163 (325)
T ss_pred             HcCCCCHHHHHHHHHHHHHHHHHHHHCC---eeecCCCHHHeEECCCCCEEEeecCCcccCCCCC--CCcccccCChhhC
Confidence            3467899999999999999999999999   9999999999999999999999999987532111  1123346788999


Q ss_pred             CcccccCCCcccccceEehhHHHHHHHhcccCCCCcCCCcccccccccCCCccccCccccCCcCHHHHHHHHHHHHHhcc
Q 041793           83 APEYASDGKFSVKSDVFSFGILLLEIISGKKNRGFYHSDNKLNLIGHVSMPSQLIDPCIQGSFNLVEVIRCIHIGLLCVQ  162 (224)
Q Consensus        83 aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~  162 (224)
                      |||.+.+..++.++|+|||||++|+|++|..||.......   ....+.......    ....    ...+.+++.+||+
T Consensus       164 aPE~~~~~~~~~~~DvwslG~il~el~~G~~pf~~~~~~~---~~~~~~~~~~~~----~~~~----~~~~~~ll~~ll~  232 (325)
T cd05604         164 APEVIRKQPYDNTVDWWCLGAVLYEMLYGLPPFYCRDVAE---MYDNILHKPLVL----RPGA----SLTAWSILEELLE  232 (325)
T ss_pred             CHHHHcCCCCCCcCccccccceehhhhcCCCCCCCCCHHH---HHHHHHcCCccC----CCCC----CHHHHHHHHHHhc
Confidence            9999999889999999999999999999999986433221   111111111101    1111    1346678899999


Q ss_pred             CCCCCCCChHH
Q 041793          163 QHPKDRPSMPS  173 (224)
Q Consensus       163 ~dp~~Rps~~~  173 (224)
                      .||.+||++++
T Consensus       233 ~~p~~R~~~~~  243 (325)
T cd05604         233 KDRQRRLGAKE  243 (325)
T ss_pred             cCHHhcCCCCC
Confidence            99999998864


No 161
>KOG0589 consensus Serine/threonine protein kinase [General function prediction only]
Probab=99.95  E-value=3.5e-28  Score=198.60  Aligned_cols=161  Identities=24%  Similarity=0.367  Sum_probs=131.1

Q ss_pred             CCCCCCChHHHHHHHHHHHHHHhhhhcCCCCceEecCCCCCceEECCCCCceEeeecceeecCCCCCCCccccccccccc
Q 041793            2 ERCKILDWPKRFHIICGTARGVMYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDEIEGNTNRVIGTYGY   81 (224)
Q Consensus         2 ~~~~~l~~~~~~~i~~qi~~~l~~Lh~~~~~~i~H~dl~~~nil~~~~~~~kl~df~~~~~~~~~~~~~~~~~~~~~~~y   81 (224)
                      +++..+++++++.++.|++.|+.|||++.   |+|||||+.|||+..++.++|+|||++.......  ....+.+||+.|
T Consensus        98 ~k~~~f~E~~i~~~~~Q~~~av~ylH~~~---iLHRDlK~~Nifltk~~~VkLgDfGlaK~l~~~~--~~a~tvvGTp~Y  172 (426)
T KOG0589|consen   98 QKGVLFPEERILKWFVQILLAVNYLHENR---VLHRDLKCANIFLTKDKKVKLGDFGLAKILNPED--SLASTVVGTPYY  172 (426)
T ss_pred             HhhccccHHHHHHHHHHHHHHHHHHHhhh---hhcccchhhhhhccccCceeecchhhhhhcCCch--hhhheecCCCcc
Confidence            34678999999999999999999999888   9999999999999999999999999999875443  234557899999


Q ss_pred             CCcccccCCCcccccceEehhHHHHHHHhcccCCCCcCCCcccccccccCCCccccCccccCCcCHHHHHHHHHHHHHhc
Q 041793           82 MAPEYASDGKFSVKSDVFSFGILLLEIISGKKNRGFYHSDNKLNLIGHVSMPSQLIDPCIQGSFNLVEVIRCIHIGLLCV  161 (224)
Q Consensus        82 ~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl  161 (224)
                      ++||++.+.+|..|+|||||||++|||.+-+.+|...+......   .+.....       .+.+..+...+..||..|+
T Consensus       173 mcPEil~d~pYn~KSDiWsLGC~~yEm~~lk~aF~a~~m~~Li~---ki~~~~~-------~Plp~~ys~el~~lv~~~l  242 (426)
T KOG0589|consen  173 MCPEILSDIPYNEKSDIWSLGCCLYEMCTLKPAFKASNMSELIL---KINRGLY-------SPLPSMYSSELRSLVKSML  242 (426)
T ss_pred             cCHHHhCCCCCCccCcchhhcchHHHHHhcccccCccchHHHHH---HHhhccC-------CCCCccccHHHHHHHHHHh
Confidence            99999999999999999999999999999999986655443322   2221110       1112223445778888999


Q ss_pred             cCCCCCCCChHHHHHH
Q 041793          162 QQHPKDRPSMPSVILM  177 (224)
Q Consensus       162 ~~dp~~Rps~~~v~~~  177 (224)
                      ..+|+.||++.+++..
T Consensus       243 ~~~P~~RPsa~~LL~~  258 (426)
T KOG0589|consen  243 RKNPEHRPSALELLRR  258 (426)
T ss_pred             hcCCccCCCHHHHhhC
Confidence            9999999999999875


No 162
>KOG0033 consensus Ca2+/calmodulin-dependent protein kinase, EF-Hand protein superfamily [Signal transduction mechanisms]
Probab=99.95  E-value=1.6e-27  Score=179.08  Aligned_cols=156  Identities=22%  Similarity=0.303  Sum_probs=119.0

Q ss_pred             CChHHHHHHHHHHHHHHhhhhcCCCCceEecCCCCCceEEC---CCCCceEeeecceeecCCCCCCCcccccccccccCC
Q 041793            7 LDWPKRFHIICGTARGVMYLHQDSRLRIIHRDLKASNVLLD---QDMNPKISDFGLARAFGGDEIEGNTNRVIGTYGYMA   83 (224)
Q Consensus         7 l~~~~~~~i~~qi~~~l~~Lh~~~~~~i~H~dl~~~nil~~---~~~~~kl~df~~~~~~~~~~~~~~~~~~~~~~~y~a   83 (224)
                      .++...-+++.||++||.|+|+++   |+|||+||+|+++.   ...-+||+|||++.....   .....-+.|++.|++
T Consensus       107 ySEa~aSH~~rQiLeal~yCH~n~---IvHRDvkP~nllLASK~~~A~vKL~~FGvAi~l~~---g~~~~G~~GtP~fma  180 (355)
T KOG0033|consen  107 YSEADASHCIQQILEALAYCHSNG---IVHRDLKPENLLLASKAKGAAVKLADFGLAIEVND---GEAWHGFAGTPGYLS  180 (355)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHhcC---ceeccCChhheeeeeccCCCceeecccceEEEeCC---ccccccccCCCcccC
Confidence            456677789999999999999999   99999999999985   345689999999998762   223445789999999


Q ss_pred             cccccCCCcccccceEehhHHHHHHHhcccCCCCcCCCcccccccccCCCccccC-ccccCCcCHHHHHHHHHHHHHhcc
Q 041793           84 PEYASDGKFSVKSDVFSFGILLLEIISGKKNRGFYHSDNKLNLIGHVSMPSQLID-PCIQGSFNLVEVIRCIHIGLLCVQ  162 (224)
Q Consensus        84 PE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~li~~cl~  162 (224)
                      ||+++..+++...|||+.|+++|-++.|.+||........-+   .+.....-++ +.+.. ..    ....+|+++||.
T Consensus       181 PEvvrkdpy~kpvDiW~cGViLfiLL~G~~PF~~~~~~rlye---~I~~g~yd~~~~~w~~-is----~~Ak~LvrrML~  252 (355)
T KOG0033|consen  181 PEVLKKDPYSKPVDIWACGVILYILLVGYPPFWDEDQHRLYE---QIKAGAYDYPSPEWDT-VT----PEAKSLIRRMLT  252 (355)
T ss_pred             HHHhhcCCCCCcchhhhhhHHHHHHHhCCCCCCCccHHHHHH---HHhccccCCCCcccCc-CC----HHHHHHHHHHhc
Confidence            999999999999999999999999999999985433222222   2221111111 12211 11    134578889999


Q ss_pred             CCCCCCCChHHHHH
Q 041793          163 QHPKDRPSMPSVIL  176 (224)
Q Consensus       163 ~dp~~Rps~~~v~~  176 (224)
                      .||.+|.|+.|+++
T Consensus       253 ~dP~kRIta~EAL~  266 (355)
T KOG0033|consen  253 VNPKKRITADEALK  266 (355)
T ss_pred             cChhhhccHHHHhC
Confidence            99999999999986


No 163
>smart00750 KIND kinase non-catalytic C-lobe domain. It is an interaction domain identified as being similar to the C-terminal protein kinase catalytic fold (C lobe). Its presence at the N terminus of signalling proteins and the absence of the active-site residues in the catalytic and activation loops suggest that it folds independently and is likely to be non-catalytic. The occurrence of KIND only in metazoa implies that it has evolved from the catalytic protein kinase domain into an interaction domain possibly by keeping the substrate-binding features
Probab=99.95  E-value=1.6e-27  Score=177.51  Aligned_cols=157  Identities=18%  Similarity=0.187  Sum_probs=115.8

Q ss_pred             CCCCCChHHHHHHHHHHHHHHhhhhcCCCCceEecCCCCCceEECCCCCceEeeecceeecCCCCCCCcccccccccccC
Q 041793            3 RCKILDWPKRFHIICGTARGVMYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDEIEGNTNRVIGTYGYM   82 (224)
Q Consensus         3 ~~~~l~~~~~~~i~~qi~~~l~~Lh~~~~~~i~H~dl~~~nil~~~~~~~kl~df~~~~~~~~~~~~~~~~~~~~~~~y~   82 (224)
                      +++.|++.+++.++.||+.||.|||+.+         ||+||+++.++.+++  ||++.......       ..++..|+
T Consensus        10 ~~~~l~~~~~~~i~~qi~~~L~~lH~~~---------kp~Nil~~~~~~~~~--fG~~~~~~~~~-------~~g~~~y~   71 (176)
T smart00750       10 RGRPLNEEEIWAVCLQCLRALRELHRQA---------KSGNILLTWDGLLKL--DGSVAFKTPEQ-------SRVDPYFM   71 (176)
T ss_pred             hCCCCCHHHHHHHHHHHHHHHHHHHhcC---------CcccEeEcCccceee--ccceEeecccc-------CCCccccc
Confidence            3567999999999999999999999985         999999999999998  99987653321       24678999


Q ss_pred             CcccccCCCcccccceEehhHHHHHHHhcccCCCCcCCCccccccccc--CCCccccCccccCCcCHHHHHHHHHHHHHh
Q 041793           83 APEYASDGKFSVKSDVFSFGILLLEIISGKKNRGFYHSDNKLNLIGHV--SMPSQLIDPCIQGSFNLVEVIRCIHIGLLC  160 (224)
Q Consensus        83 aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~li~~c  160 (224)
                      |||.+.+..++.++|||||||++|+|++|+.||.......  ......  ........ .........+...+.+++.+|
T Consensus        72 aPE~~~~~~~~~~~DiwSlG~il~elltg~~p~~~~~~~~--~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~i~~c  148 (176)
T smart00750       72 APEVIQGQSYTEKADIYSLGITLYEALDYELPYNEERELS--AILEILLNGMPADDPR-DRSNLESVSAARSFADFMRVC  148 (176)
T ss_pred             ChHHhcCCCCcchhhHHHHHHHHHHHHhCCCCccccchhc--HHHHHHHHHhccCCcc-ccccHHHHHhhhhHHHHHHHH
Confidence            9999999999999999999999999999999985432211  111111  00111000 000111111112578999999


Q ss_pred             ccCCCCCCCChHHHHHHhcc
Q 041793          161 VQQHPKDRPSMPSVILMLGS  180 (224)
Q Consensus       161 l~~dp~~Rps~~~v~~~L~~  180 (224)
                      |..||++||++.++++.+..
T Consensus       149 l~~~p~~Rp~~~~ll~~~~~  168 (176)
T smart00750      149 ASRLPQRREAANHYLAHCRA  168 (176)
T ss_pred             HhcccccccCHHHHHHHHHH
Confidence            99999999999999998743


No 164
>cd05103 PTKc_VEGFR2 Catalytic domain of the Protein Tyrosine Kinase, Vascular Endothelial Growth Factor Receptor 2. Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor 2 (VEGFR2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR2 (or Flk1) is a member of the VEGFR subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of VEGFRs to their ligands, the VEGFs, leads to receptor dimerization, activation, and intracellular signaling. The carboxyl terminus of VEGFR2 plays an important role in its autophosp
Probab=99.95  E-value=2.1e-27  Score=194.90  Aligned_cols=165  Identities=29%  Similarity=0.396  Sum_probs=122.3

Q ss_pred             CCCChHHHHHHHHHHHHHHhhhhcCCCCceEecCCCCCceEECCCCCceEeeecceeecCCCCCCCcccccccccccCCc
Q 041793            5 KILDWPKRFHIICGTARGVMYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDEIEGNTNRVIGTYGYMAP   84 (224)
Q Consensus         5 ~~l~~~~~~~i~~qi~~~l~~Lh~~~~~~i~H~dl~~~nil~~~~~~~kl~df~~~~~~~~~~~~~~~~~~~~~~~y~aP   84 (224)
                      +.+++.++..++.||+.||.|||+.+   |+|+||||.||+++.++.++++|||++................++..|+||
T Consensus       174 ~~~~~~~~~~~~~qi~~al~~lH~~~---i~H~dikp~Nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~aP  250 (343)
T cd05103         174 KVLTLEDLICYSFQVAKGMEFLASRK---CIHRDLAARNILLSENNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAP  250 (343)
T ss_pred             ccCCHHHHHHHHHHHHHHHHHHHhCC---eecCCCccCeEEEcCCCcEEEEecccccccccCcchhhcCCCCCCcceECc
Confidence            46899999999999999999999999   999999999999999999999999998765322111111122345679999


Q ss_pred             ccccCCCcccccceEehhHHHHHHHh-cccCCCCcCCCcccccccccCCCccccCccccCCcCHHHHHHHHHHHHHhccC
Q 041793           85 EYASDGKFSVKSDVFSFGILLLEIIS-GKKNRGFYHSDNKLNLIGHVSMPSQLIDPCIQGSFNLVEVIRCIHIGLLCVQQ  163 (224)
Q Consensus        85 E~~~~~~~~~~~Di~slG~il~~l~~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~  163 (224)
                      |.+.+..++.++|+||||++++++++ |..||........  ............   .+...+    ..+.+++.+||+.
T Consensus       251 E~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~~~--~~~~~~~~~~~~---~~~~~~----~~~~~~~~~cl~~  321 (343)
T cd05103         251 ETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEE--FCRRLKEGTRMR---APDYTT----PEMYQTMLDCWHG  321 (343)
T ss_pred             HHhcCCCCCchhhHHHHHHHHHHHHHCCCCCCCCccccHH--HHHHHhccCCCC---CCCCCC----HHHHHHHHHHccC
Confidence            99988889999999999999999997 8888754322211  111000000000   011111    2467889999999


Q ss_pred             CCCCCCChHHHHHHhccC
Q 041793          164 HPKDRPSMPSVILMLGSE  181 (224)
Q Consensus       164 dp~~Rps~~~v~~~L~~~  181 (224)
                      ||++||++.+|++.|+..
T Consensus       322 ~p~~Rps~~eil~~l~~~  339 (343)
T cd05103         322 EPSQRPTFSELVEHLGNL  339 (343)
T ss_pred             ChhhCcCHHHHHHHHHHH
Confidence            999999999999999765


No 165
>cd05040 PTKc_Ack_like Catalytic domain of the Protein Tyrosine Kinase, Activated Cdc42-associated kinase. Protein Tyrosine Kinase (PTK) family; Activated Cdc42-associated kinase (Ack) subfamily; catalytic (c) domain. Ack subfamily members include Ack1, thirty-eight-negative kinase 1 (Tnk1), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ack subfamily members are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal catalytic domain, an SH3 domain, a Cdc42-binding CRIB domain, and a proline-rich region. They are mainly expressed in brain and skeletal tissues and are involved in the regulation of cell adhesion and growth, receptor degradation, and axonal guidance. Ack1 is also associated with and
Probab=99.95  E-value=1.9e-27  Score=187.13  Aligned_cols=163  Identities=28%  Similarity=0.388  Sum_probs=123.1

Q ss_pred             CCCChHHHHHHHHHHHHHHhhhhcCCCCceEecCCCCCceEECCCCCceEeeecceeecCCCCCC-CcccccccccccCC
Q 041793            5 KILDWPKRFHIICGTARGVMYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDEIE-GNTNRVIGTYGYMA   83 (224)
Q Consensus         5 ~~l~~~~~~~i~~qi~~~l~~Lh~~~~~~i~H~dl~~~nil~~~~~~~kl~df~~~~~~~~~~~~-~~~~~~~~~~~y~a   83 (224)
                      +.+++..++.++.|++.||.|||+.+   ++|+||+|+||+++.++.++++|||++......... .......++..|++
T Consensus        92 ~~~~~~~~~~~~~qi~~~L~~lH~~~---i~H~di~p~nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~y~~  168 (257)
T cd05040          92 GHFLISTLCDYAVQIANGMRYLESKR---FIHRDLAARNILLASDDKVKIGDFGLMRALPQNEDHYVMEEHLKVPFAWCA  168 (257)
T ss_pred             ccCcHHHHHHHHHHHHHHHHHHHhCC---ccccccCcccEEEecCCEEEeccccccccccccccceecccCCCCCceecC
Confidence            57899999999999999999999999   999999999999999999999999999876432211 11112345678999


Q ss_pred             cccccCCCcccccceEehhHHHHHHHh-cccCCCCcCCCcccccccccCCCccccCccccCCcCHHHHHHHHHHHHHhcc
Q 041793           84 PEYASDGKFSVKSDVFSFGILLLEIIS-GKKNRGFYHSDNKLNLIGHVSMPSQLIDPCIQGSFNLVEVIRCIHIGLLCVQ  162 (224)
Q Consensus        84 PE~~~~~~~~~~~Di~slG~il~~l~~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~  162 (224)
                      ||.+.+..++.++|+||||+++++|++ |..||......+.......  .......   ...    ....+.+++.+||+
T Consensus       169 pE~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~~~~~~~~~~~--~~~~~~~---~~~----~~~~~~~li~~~l~  239 (257)
T cd05040         169 PESLRTRTFSHASDVWMFGVTLWEMFTYGEEPWAGLSGSQILKKIDK--EGERLER---PEA----CPQDIYNVMLQCWA  239 (257)
T ss_pred             HHHhcccCcCchhhhHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHh--cCCcCCC---Ccc----CCHHHHHHHHHHCC
Confidence            999988889999999999999999998 9999754332221111111  0011000   011    12356789999999


Q ss_pred             CCCCCCCChHHHHHHhc
Q 041793          163 QHPKDRPSMPSVILMLG  179 (224)
Q Consensus       163 ~dp~~Rps~~~v~~~L~  179 (224)
                      .+|++||++.+|++.|.
T Consensus       240 ~~p~~Rps~~~~~~~l~  256 (257)
T cd05040         240 HNPADRPTFAALREFLP  256 (257)
T ss_pred             CCcccCCCHHHHHHHhc
Confidence            99999999999999875


No 166
>cd05607 STKc_GRK7 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 7. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK7 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK7, also called iodopsin kinase, belongs to the visual gr
Probab=99.95  E-value=1.4e-27  Score=190.44  Aligned_cols=162  Identities=25%  Similarity=0.330  Sum_probs=121.6

Q ss_pred             CCCCChHHHHHHHHHHHHHHhhhhcCCCCceEecCCCCCceEECCCCCceEeeecceeecCCCCCCCcccccccccccCC
Q 041793            4 CKILDWPKRFHIICGTARGVMYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDEIEGNTNRVIGTYGYMA   83 (224)
Q Consensus         4 ~~~l~~~~~~~i~~qi~~~l~~Lh~~~~~~i~H~dl~~~nil~~~~~~~kl~df~~~~~~~~~~~~~~~~~~~~~~~y~a   83 (224)
                      ...+++..++.++.||+.||+|||+.|   ++||||+|+||+++.++.++++|||++.......   ......++..|+|
T Consensus        89 ~~~~~~~~~~~~~~qi~~al~~lH~~~---ivH~dikp~Nili~~~~~~~l~Dfg~~~~~~~~~---~~~~~~~~~~y~a  162 (277)
T cd05607          89 ERGLEMERVIHYSAQITCGILHLHSMD---IVYRDMKPENVLLDDQGNCRLSDLGLAVELKDGK---TITQRAGTNGYMA  162 (277)
T ss_pred             ccCCCHHHHHHHHHHHHHHHHHHHHCC---EEEccCChHhEEEcCCCCEEEeeceeeeecCCCc---eeeccCCCCCccC
Confidence            346889999999999999999999999   9999999999999999999999999987654322   1223457789999


Q ss_pred             cccccCCCcccccceEehhHHHHHHHhcccCCCCcCCCccc-ccccccCCCccccCccccCCcCHHHHHHHHHHHHHhcc
Q 041793           84 PEYASDGKFSVKSDVFSFGILLLEIISGKKNRGFYHSDNKL-NLIGHVSMPSQLIDPCIQGSFNLVEVIRCIHIGLLCVQ  162 (224)
Q Consensus        84 PE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~  162 (224)
                      ||.+.+..++.++|+|||||++|+|++|+.||......... ....... ......  .....    ...+.+|+..||+
T Consensus       163 PE~~~~~~~~~~~DvwslGv~l~el~~g~~p~~~~~~~~~~~~~~~~~~-~~~~~~--~~~~~----~~~~~~li~~~L~  235 (277)
T cd05607         163 PEILKEEPYSYPVDWFAMGCSIYEMVAGRTPFKDHKEKVAKEELKRRTL-EDEVKF--EHQNF----TEESKDICRLFLA  235 (277)
T ss_pred             HHHHccCCCCCchhHHHHHHHHHHHHhCCCCCCCCcchhhHHHHHHHhh-cccccc--ccccC----CHHHHHHHHHHhc
Confidence            99998888999999999999999999999998654322111 1111111 011000  00111    2246789999999


Q ss_pred             CCCCCCCChHHHHHHh
Q 041793          163 QHPKDRPSMPSVILML  178 (224)
Q Consensus       163 ~dp~~Rps~~~v~~~L  178 (224)
                      .||++||+++|+++.+
T Consensus       236 ~~P~~R~~~~~~~~~~  251 (277)
T cd05607         236 KKPEDRLGSREKNDDP  251 (277)
T ss_pred             cCHhhCCCCccchhhh
Confidence            9999999998776544


No 167
>cd05058 PTKc_Met_Ron Catalytic domain of the Protein Tyrosine Kinases, Met and Ron. Protein Tyrosine Kinase (PTK) family; Met and Ron; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Met and Ron are receptor tyr kinases (RTKs) composed of an alpha-beta heterodimer. The extracellular alpha chain is disulfide linked to the beta chain, which contains an extracellular ligand-binding region with a sema domain, a PSI domain and four IPT repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Met binds to the ligand, hepatocyte growth factor/scatter factor (HGF/SF), and is also ca
Probab=99.95  E-value=1.7e-27  Score=188.01  Aligned_cols=164  Identities=26%  Similarity=0.344  Sum_probs=119.3

Q ss_pred             CCCChHHHHHHHHHHHHHHhhhhcCCCCceEecCCCCCceEECCCCCceEeeecceeecCCCCCC--CcccccccccccC
Q 041793            5 KILDWPKRFHIICGTARGVMYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDEIE--GNTNRVIGTYGYM   82 (224)
Q Consensus         5 ~~l~~~~~~~i~~qi~~~l~~Lh~~~~~~i~H~dl~~~nil~~~~~~~kl~df~~~~~~~~~~~~--~~~~~~~~~~~y~   82 (224)
                      ..+++..++.++.||+.||.|||+.+   ++|+||+|+||+++.++.++++|||++.........  .......++..|+
T Consensus        93 ~~~~~~~~~~~~~~i~~~l~~lH~~~---i~H~dlk~~nili~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~y~  169 (262)
T cd05058          93 HNPTVKDLIGFGLQVAKGMEYLASKK---FVHRDLAARNCMLDESFTVKVADFGLARDIYDKEYYSVHNHTGAKLPVKWM  169 (262)
T ss_pred             CCCCHHHHHHHHHHHHHHHHHHHhCC---ccccccCcceEEEcCCCcEEECCccccccccCCcceeecccccCcCCcccc
Confidence            45678888999999999999999999   999999999999999999999999998754321110  0111223456799


Q ss_pred             CcccccCCCcccccceEehhHHHHHHHhcc-cCCCCcCCCcccccccccCCCccccCccccCCcCHHHHHHHHHHHHHhc
Q 041793           83 APEYASDGKFSVKSDVFSFGILLLEIISGK-KNRGFYHSDNKLNLIGHVSMPSQLIDPCIQGSFNLVEVIRCIHIGLLCV  161 (224)
Q Consensus        83 aPE~~~~~~~~~~~Di~slG~il~~l~~g~-~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl  161 (224)
                      |||.+.+..++.++||||||+++|+|++|+ +||....   ................   ....    ...+.+++.+||
T Consensus       170 aPE~~~~~~~~~~~Di~slG~~l~el~~~~~~~~~~~~---~~~~~~~~~~~~~~~~---~~~~----~~~~~~li~~cl  239 (262)
T cd05058         170 ALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVD---SFDITVYLLQGRRLLQ---PEYC----PDPLYEVMLSCW  239 (262)
T ss_pred             ChhHhccCccchHHHHHHHHHHHHHHHcCCCCCCCCCC---HHHHHHHHhcCCCCCC---CCcC----CHHHHHHHHHHc
Confidence            999998888999999999999999999964 4543222   1111111111111100   0111    124678999999


Q ss_pred             cCCCCCCCChHHHHHHhccC
Q 041793          162 QQHPKDRPSMPSVILMLGSE  181 (224)
Q Consensus       162 ~~dp~~Rps~~~v~~~L~~~  181 (224)
                      +.+|++||++.+|++.|+..
T Consensus       240 ~~~p~~Rp~~~~il~~l~~~  259 (262)
T cd05058         240 HPKPEMRPTFSELVSRIEQI  259 (262)
T ss_pred             CCChhhCCCHHHHHHHHHHH
Confidence            99999999999999999764


No 168
>cd05057 PTKc_EGFR_like Catalytic domain of Epidermal Growth Factor Receptor-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Epidermal Growth Factor Receptor (EGFR) subfamily; catalytic (c) domain. EGFR (HER, ErbB) subfamily members include EGFR (HER1, ErbB1), HER2 (ErbB2), HER3 (ErbB3), HER4 (ErbB4), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The EGFR proteins are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instea
Probab=99.95  E-value=1.8e-27  Score=189.66  Aligned_cols=165  Identities=25%  Similarity=0.347  Sum_probs=125.3

Q ss_pred             CCCCChHHHHHHHHHHHHHHhhhhcCCCCceEecCCCCCceEECCCCCceEeeecceeecCCCCCCCcccccccccccCC
Q 041793            4 CKILDWPKRFHIICGTARGVMYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDEIEGNTNRVIGTYGYMA   83 (224)
Q Consensus         4 ~~~l~~~~~~~i~~qi~~~l~~Lh~~~~~~i~H~dl~~~nil~~~~~~~kl~df~~~~~~~~~~~~~~~~~~~~~~~y~a   83 (224)
                      ...+++..++.++.||+.||+|||+.+   ++|+||+|+||+++.++.++|+|||++................++..|++
T Consensus       103 ~~~~~~~~~~~~~~qi~~~l~~LH~~~---i~H~di~p~nil~~~~~~~kL~dfg~~~~~~~~~~~~~~~~~~~~~~y~~  179 (279)
T cd05057         103 KDNIGSQYLLNWCVQIAKGMSYLEEKR---LVHRDLAARNVLVKTPQHVKITDFGLAKLLDVDEKEYHAEGGKVPIKWMA  179 (279)
T ss_pred             cCCCCHHHHHHHHHHHHHHHHHHHhCC---EEecccCcceEEEcCCCeEEECCCcccccccCcccceecCCCcccccccC
Confidence            446899999999999999999999999   99999999999999999999999999987643221111111223457999


Q ss_pred             cccccCCCcccccceEehhHHHHHHHh-cccCCCCcCCCcccccccccCCCccccCccccCCcCHHHHHHHHHHHHHhcc
Q 041793           84 PEYASDGKFSVKSDVFSFGILLLEIIS-GKKNRGFYHSDNKLNLIGHVSMPSQLIDPCIQGSFNLVEVIRCIHIGLLCVQ  162 (224)
Q Consensus        84 PE~~~~~~~~~~~Di~slG~il~~l~~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~  162 (224)
                      ||.+.+..++.++|+||||++++++++ |..||......+....+..   ......+   ...+    ..+.+++.+||.
T Consensus       180 PE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~~~~~~~~~---~~~~~~~---~~~~----~~~~~~~~~~l~  249 (279)
T cd05057         180 LESILHRIYTHKSDVWSYGVTVWELMTFGAKPYEGIPAVEIPDLLEK---GERLPQP---PICT----IDVYMVLVKCWM  249 (279)
T ss_pred             HHHhhcCCcCchhhHHHHHHHHHHHhcCCCCCCCCCCHHHHHHHHhC---CCCCCCC---CCCC----HHHHHHHHHHcC
Confidence            999888888999999999999999998 9999865443322222211   1111111   1111    346788899999


Q ss_pred             CCCCCCCChHHHHHHhccC
Q 041793          163 QHPKDRPSMPSVILMLGSE  181 (224)
Q Consensus       163 ~dp~~Rps~~~v~~~L~~~  181 (224)
                      .||++||++.++++.|...
T Consensus       250 ~~p~~Rp~~~~l~~~l~~~  268 (279)
T cd05057         250 IDAESRPTFKELINEFSKM  268 (279)
T ss_pred             CChhhCCCHHHHHHHHHHH
Confidence            9999999999999999875


No 169
>KOG0597 consensus Serine-threonine protein kinase FUSED [General function prediction only]
Probab=99.95  E-value=4.2e-28  Score=200.29  Aligned_cols=159  Identities=24%  Similarity=0.314  Sum_probs=129.8

Q ss_pred             CCCCCChHHHHHHHHHHHHHHhhhhcCCCCceEecCCCCCceEECCCCCceEeeecceeecCCCCCCCcccccccccccC
Q 041793            3 RCKILDWPKRFHIICGTARGVMYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDEIEGNTNRVIGTYGYM   82 (224)
Q Consensus         3 ~~~~l~~~~~~~i~~qi~~~l~~Lh~~~~~~i~H~dl~~~nil~~~~~~~kl~df~~~~~~~~~~~~~~~~~~~~~~~y~   82 (224)
                      .++.|+++++..++.+++.||.|||+.+   |+|||+||.||+++.+|.+|++|||+++.+...  .......-|++-|+
T Consensus        93 ~d~~lpEe~v~~~a~~LVsaL~yLhs~r---ilhrd~kPqniLl~~~~~~KlcdFg~Ar~m~~~--t~vltsikGtPlYm  167 (808)
T KOG0597|consen   93 QDGKLPEEQVRAIAYDLVSALYYLHSNR---ILHRDMKPQNILLEKGGTLKLCDFGLARAMSTN--TSVLTSIKGTPLYM  167 (808)
T ss_pred             hccCCCHHHHHHHHHHHHHHHHHHHhcC---cccccCCcceeeecCCCceeechhhhhhhcccC--ceeeeeccCccccc
Confidence            4788999999999999999999999999   999999999999999999999999999977543  33455678999999


Q ss_pred             CcccccCCCcccccceEehhHHHHHHHhcccCCCCcCCCcccccccccCCCccccCccccCCcCHHHHHHHHHHHHHhcc
Q 041793           83 APEYASDGKFSVKSDVFSFGILLLEIISGKKNRGFYHSDNKLNLIGHVSMPSQLIDPCIQGSFNLVEVIRCIHIGLLCVQ  162 (224)
Q Consensus        83 aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~  162 (224)
                      |||+..+.+|+..+|+||+||++||++.|++||....   ...++..+......        +.......++.++...|.
T Consensus       168 APElv~e~pyd~~sDlWslGcilYE~~~G~PPF~a~s---i~~Lv~~I~~d~v~--------~p~~~S~~f~nfl~gLL~  236 (808)
T KOG0597|consen  168 APELVEEQPYDHTSDLWSLGCILYELYVGQPPFYARS---ITQLVKSILKDPVK--------PPSTASSSFVNFLQGLLI  236 (808)
T ss_pred             CHHHHcCCCccchhhHHHHHHHHHHHhcCCCCchHHH---HHHHHHHHhcCCCC--------CcccccHHHHHHHHHHhh
Confidence            9999999999999999999999999999999985322   22233222211110        011223467788999999


Q ss_pred             CCCCCCCChHHHHHH
Q 041793          163 QHPKDRPSMPSVILM  177 (224)
Q Consensus       163 ~dp~~Rps~~~v~~~  177 (224)
                      .||.+|.+..+++..
T Consensus       237 kdP~~RltW~~Ll~H  251 (808)
T KOG0597|consen  237 KDPAQRLTWTDLLGH  251 (808)
T ss_pred             cChhhcccHHHHhcC
Confidence            999999999999864


No 170
>cd05047 PTKc_Tie Catalytic domain of Tie Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Tie subfamily; catalytic (c) domain. The Tie subfamily consists of Tie1 and Tie2. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie proteins are receptor tyr kinases (RTKs) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie receptors are specifically expressed in endothelial cells and hematopoietic stem cells. The angiopoietins (Ang-1 to Ang-4) serve as ligands for Tie2, while no specific l
Probab=99.95  E-value=1.8e-27  Score=188.96  Aligned_cols=161  Identities=27%  Similarity=0.364  Sum_probs=119.9

Q ss_pred             CCCChHHHHHHHHHHHHHHhhhhcCCCCceEecCCCCCceEECCCCCceEeeecceeecCCCCCCCcccccccccccCCc
Q 041793            5 KILDWPKRFHIICGTARGVMYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDEIEGNTNRVIGTYGYMAP   84 (224)
Q Consensus         5 ~~l~~~~~~~i~~qi~~~l~~Lh~~~~~~i~H~dl~~~nil~~~~~~~kl~df~~~~~~~~~~~~~~~~~~~~~~~y~aP   84 (224)
                      ..+++.+++.++.|++.||+|||+.|   ++|+||+|+||+++.++.++++|||++.......   .......+..|+||
T Consensus       107 ~~l~~~~~~~~~~~i~~al~~lH~~~---i~H~dikp~nili~~~~~~kl~dfgl~~~~~~~~---~~~~~~~~~~y~ap  180 (270)
T cd05047         107 STLSSQQLLHFAADVARGMDYLSQKQ---FIHRDLAARNILVGENYVAKIADFGLSRGQEVYV---KKTMGRLPVRWMAI  180 (270)
T ss_pred             CCCCHHHHHHHHHHHHHHHHHHHHCC---EeecccccceEEEcCCCeEEECCCCCccccchhh---hccCCCCccccCCh
Confidence            45899999999999999999999999   9999999999999999999999999885322111   01111224569999


Q ss_pred             ccccCCCcccccceEehhHHHHHHHh-cccCCCCcCCCcccccccccCCCccccCccccCCcCHHHHHHHHHHHHHhccC
Q 041793           85 EYASDGKFSVKSDVFSFGILLLEIIS-GKKNRGFYHSDNKLNLIGHVSMPSQLIDPCIQGSFNLVEVIRCIHIGLLCVQQ  163 (224)
Q Consensus        85 E~~~~~~~~~~~Di~slG~il~~l~~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~  163 (224)
                      |.+.+..++.++|+||||+++++|++ |..||...........+....    ..+  .....    ...+.+|+.+||..
T Consensus       181 E~~~~~~~~~~~Di~slG~il~el~~~g~~pf~~~~~~~~~~~~~~~~----~~~--~~~~~----~~~~~~li~~~l~~  250 (270)
T cd05047         181 ESLNYSVYTTNSDVWSYGVLLWEIVSLGGTPYCGMTCAELYEKLPQGY----RLE--KPLNC----DDEVYDLMRQCWRE  250 (270)
T ss_pred             HHHccCCCCchhhHHHHHHHHHHHHcCCCCCccccCHHHHHHHHhCCC----CCC--CCCcC----CHHHHHHHHHHccc
Confidence            99988888999999999999999997 889875432221111111100    000  01111    12467899999999


Q ss_pred             CCCCCCChHHHHHHhccC
Q 041793          164 HPKDRPSMPSVILMLGSE  181 (224)
Q Consensus       164 dp~~Rps~~~v~~~L~~~  181 (224)
                      ||.+|||+.++++.|...
T Consensus       251 ~p~~Rps~~~il~~l~~~  268 (270)
T cd05047         251 KPYERPSFAQILVSLNRM  268 (270)
T ss_pred             ChhhCCCHHHHHHHHHHh
Confidence            999999999999999754


No 171
>cd06612 STKc_MST1_2 Catalytic domain of the Protein Serine/Threonine Kinases, Mammalian Ste20-like protein kinase 1 and 2. Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 1 (MST1) and MST2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST1/2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST1, MST2, and related proteins including Drosophila Hippo and Dictyostelium discoideum Krs1 (kinase responsive to stress 1). MST1/2 and Hippo are involved in a conserved pathway that governs cell contact inhibition, organ size control, and tumor development. MST1 activates the mitogen-activated protein kinases (MAPKs) p38 and c-Jun N-terminal kinase (JNK) through MKK7 (a 
Probab=99.95  E-value=2.1e-27  Score=186.66  Aligned_cols=160  Identities=29%  Similarity=0.435  Sum_probs=122.0

Q ss_pred             CCCCChHHHHHHHHHHHHHHhhhhcCCCCceEecCCCCCceEECCCCCceEeeecceeecCCCCCCCcccccccccccCC
Q 041793            4 CKILDWPKRFHIICGTARGVMYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDEIEGNTNRVIGTYGYMA   83 (224)
Q Consensus         4 ~~~l~~~~~~~i~~qi~~~l~~Lh~~~~~~i~H~dl~~~nil~~~~~~~kl~df~~~~~~~~~~~~~~~~~~~~~~~y~a   83 (224)
                      +..+++..++.++.|++.||.|||+.+   ++|+||+|.||+++.++.++|+|||++........  ......++..|++
T Consensus        93 ~~~l~~~~~~~~~~~l~~~l~~lh~~~---i~H~dl~~~ni~~~~~~~~~l~dfg~~~~~~~~~~--~~~~~~~~~~y~~  167 (256)
T cd06612          93 NKTLTEEEIAAILYQTLKGLEYLHSNK---KIHRDIKAGNILLNEEGQAKLADFGVSGQLTDTMA--KRNTVIGTPFWMA  167 (256)
T ss_pred             ccCCCHHHHHHHHHHHHHHHHHHHHCC---cccCCCCcceEEECCCCcEEEcccccchhcccCcc--ccccccCCccccC
Confidence            567899999999999999999999999   99999999999999999999999999886543321  1222446778999


Q ss_pred             cccccCCCcccccceEehhHHHHHHHhcccCCCCcCCCcccccccccCCCccccCccccCCcCHHHHHHHHHHHHHhccC
Q 041793           84 PEYASDGKFSVKSDVFSFGILLLEIISGKKNRGFYHSDNKLNLIGHVSMPSQLIDPCIQGSFNLVEVIRCIHIGLLCVQQ  163 (224)
Q Consensus        84 PE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~  163 (224)
                      ||.+.+..++.++|+||||+++++|++|+.||................      ......  +......+.+++.+||+.
T Consensus       168 PE~~~~~~~~~~~Di~s~G~il~~l~~g~~p~~~~~~~~~~~~~~~~~------~~~~~~--~~~~~~~~~~~i~~~l~~  239 (256)
T cd06612         168 PEVIQEIGYNNKADIWSLGITAIEMAEGKPPYSDIHPMRAIFMIPNKP------PPTLSD--PEKWSPEFNDFVKKCLVK  239 (256)
T ss_pred             HHHHhcCCCCchhhHHHHHHHHHHHHhCCCCCCCcchhhhhhhhccCC------CCCCCc--hhhcCHHHHHHHHHHHhc
Confidence            999988888999999999999999999999986533222111111000      000000  011123467899999999


Q ss_pred             CCCCCCChHHHHH
Q 041793          164 HPKDRPSMPSVIL  176 (224)
Q Consensus       164 dp~~Rps~~~v~~  176 (224)
                      ||++|||+.+|++
T Consensus       240 ~P~~Rps~~~il~  252 (256)
T cd06612         240 DPEERPSAIQLLQ  252 (256)
T ss_pred             ChhhCcCHHHHhc
Confidence            9999999999975


No 172
>cd05037 PTK_Jak_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinases, Janus kinases. Protein Tyrosine Kinase (PTK) family; Janus kinase (Jak) subfamily; pseudokinase domain (repeat1). The Jak subfamily is composed of Jak1, Jak2, Jak3, TYK2, and similar proteins. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal catalytic tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the ki
Probab=99.95  E-value=2.5e-27  Score=186.49  Aligned_cols=153  Identities=22%  Similarity=0.342  Sum_probs=117.1

Q ss_pred             CCChHHHHHHHHHHHHHHhhhhcCCCCceEecCCCCCceEECCCC-------CceEeeecceeecCCCCCCCcccccccc
Q 041793            6 ILDWPKRFHIICGTARGVMYLHQDSRLRIIHRDLKASNVLLDQDM-------NPKISDFGLARAFGGDEIEGNTNRVIGT   78 (224)
Q Consensus         6 ~l~~~~~~~i~~qi~~~l~~Lh~~~~~~i~H~dl~~~nil~~~~~-------~~kl~df~~~~~~~~~~~~~~~~~~~~~   78 (224)
                      .+++..++.++.||+.||.|||+.+   |+|+||||+||+++.++       .++++|||++.....      .....+.
T Consensus        97 ~~~~~~~~~~~~~i~~~l~~LH~~~---i~H~dlkp~Nill~~~~~~~~~~~~~kl~Dfg~a~~~~~------~~~~~~~  167 (259)
T cd05037          97 NVSLHWKLDVAKQLASALHYLEDKK---LVHGNVCGKNILVARYGLNEGYVPFIKLSDPGIPITVLS------REERVER  167 (259)
T ss_pred             CCCHHHHHHHHHHHHHHHHHHhhCC---eecccCccceEEEecCccccCCceeEEeCCCCccccccc------ccccccC
Confidence            6899999999999999999999999   99999999999999887       799999999876432      1123456


Q ss_pred             cccCCcccccCC--CcccccceEehhHHHHHHHh-cccCCCCcCCCcccccccccCCCccccCccccCCcCHHHHHHHHH
Q 041793           79 YGYMAPEYASDG--KFSVKSDVFSFGILLLEIIS-GKKNRGFYHSDNKLNLIGHVSMPSQLIDPCIQGSFNLVEVIRCIH  155 (224)
Q Consensus        79 ~~y~aPE~~~~~--~~~~~~Di~slG~il~~l~~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  155 (224)
                      ..|+|||.+.+.  .++.++|+||||++++++++ |..||.............   .......+      .   ...+.+
T Consensus       168 ~~y~aPE~~~~~~~~~~~~~Di~slG~~~~~l~~~~~~p~~~~~~~~~~~~~~---~~~~~~~~------~---~~~~~~  235 (259)
T cd05037         168 IPWIAPECIRNGQASLTIAADKWSFGTTLLEICSNGEEPLSTLSSSEKERFYQ---DQHRLPMP------D---CAELAN  235 (259)
T ss_pred             CCccChhhhcCCCCCcchhhHHHHHHHHHHHHHhCCCCCcccCCchhHHHHHh---cCCCCCCC------C---chHHHH
Confidence            679999998776  67899999999999999999 466664433221111111   11111110      1   145778


Q ss_pred             HHHHhccCCCCCCCChHHHHHHhc
Q 041793          156 IGLLCVQQHPKDRPSMPSVILMLG  179 (224)
Q Consensus       156 li~~cl~~dp~~Rps~~~v~~~L~  179 (224)
                      ++.+||..+|++||++.+|++.|+
T Consensus       236 li~~~l~~~p~~Rpt~~~il~~l~  259 (259)
T cd05037         236 LINQCWTYDPTKRPSFRAILRDLN  259 (259)
T ss_pred             HHHHHhccChhhCCCHHHHHHhcC
Confidence            999999999999999999998873


No 173
>cd05087 PTKc_Aatyk1_Aatyk3 Catalytic domain of the Protein Tyrosine Kinases, Apoptosis-associated tyrosine kinases 1 and 3. Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase 1 (Aatyk1) and Aatyk3; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk1 and Aatyk3 are members of the Aatyk subfamily of proteins. Aatyk3 is a receptor kinase containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk1 has a similar domain arrangement but without the transmembrane segment and is thus, a cytoplasmic (or nonreceptor) kinase. The expression of Aatyk1 (also referred simply as Aatyk) is upregulated during growth arrest and apoptosis in myeloid cells
Probab=99.95  E-value=4.2e-27  Score=186.62  Aligned_cols=165  Identities=24%  Similarity=0.393  Sum_probs=117.0

Q ss_pred             CCChHHHHHHHHHHHHHHhhhhcCCCCceEecCCCCCceEECCCCCceEeeecceeecCCCCCCCcccccccccccCCcc
Q 041793            6 ILDWPKRFHIICGTARGVMYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDEIEGNTNRVIGTYGYMAPE   85 (224)
Q Consensus         6 ~l~~~~~~~i~~qi~~~l~~Lh~~~~~~i~H~dl~~~nil~~~~~~~kl~df~~~~~~~~~~~~~~~~~~~~~~~y~aPE   85 (224)
                      .+++..+..++.|++.||.|||+.+   ++|+||||+||+++.++.++|+|||.+................++..|+|||
T Consensus        96 ~~~~~~~~~~~~qi~~al~~lH~~~---i~H~dlkp~nil~~~~~~~kL~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE  172 (269)
T cd05087          96 TPDPTTLQRMACEIALGLLHLHKNN---FIHSDLALRNCLLTADLTVKIGDYGLSHNKYKEDYYVTPDQLWVPLRWIAPE  172 (269)
T ss_pred             cccHHHHHHHHHHHHHHHHHHHHCC---EeccccCcceEEEcCCCcEEECCccccccccCcceeecCCCcCCcccccCHh
Confidence            4567788899999999999999999   9999999999999999999999999986543222111122234567899999


Q ss_pred             cccCC-------CcccccceEehhHHHHHHHh-cccCCCCcCCCcccccccccCCCccccCccccCCcCHHHHHHHHHHH
Q 041793           86 YASDG-------KFSVKSDVFSFGILLLEIIS-GKKNRGFYHSDNKLNLIGHVSMPSQLIDPCIQGSFNLVEVIRCIHIG  157 (224)
Q Consensus        86 ~~~~~-------~~~~~~Di~slG~il~~l~~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li  157 (224)
                      .+.+.       .++.++|+||||+++|++++ |..||............. ........++......+    ..+.+++
T Consensus       173 ~~~~~~~~~~~~~~~~~~DiwslG~~l~el~~~g~~p~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~----~~~~~l~  247 (269)
T cd05087         173 LVDEVHGNLLVVDQTKESNVWSLGVTIWELFELGSQPYRHLSDEQVLTYTV-REQQLKLPKPRLKLPLS----DRWYEVM  247 (269)
T ss_pred             HhccccccccccCCCccchhHHHHHHHHHHHhCCCCCCCCCChHHHHHHHh-hcccCCCCCCccCCCCC----hHHHHHH
Confidence            88532       35789999999999999996 999986544332211100 01111112222221111    2356688


Q ss_pred             HHhccCCCCCCCChHHHHHHhc
Q 041793          158 LLCVQQHPKDRPSMPSVILMLG  179 (224)
Q Consensus       158 ~~cl~~dp~~Rps~~~v~~~L~  179 (224)
                      ..|| .+|++|||+++|++.|.
T Consensus       248 ~~c~-~~P~~Rpt~~~l~~~l~  268 (269)
T cd05087         248 QFCW-LQPEQRPSAEEVHLLLS  268 (269)
T ss_pred             HHHh-cCcccCCCHHHHHHHhc
Confidence            8998 68999999999999874


No 174
>cd05599 STKc_NDR_like Catalytic domain of Nuclear Dbf2-Related kinase-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Nuclear Dbf2-Related (NDR) kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. NDR kinases regulate mitosis, cell growth, embryonic development, and neurological processes. They are also required for proper centrosome duplica
Probab=99.95  E-value=5e-27  Score=194.07  Aligned_cols=163  Identities=20%  Similarity=0.240  Sum_probs=118.7

Q ss_pred             CCCCChHHHHHHHHHHHHHHhhhhcCCCCceEecCCCCCceEECCCCCceEeeecceeecCCCCCCC-------------
Q 041793            4 CKILDWPKRFHIICGTARGVMYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDEIEG-------------   70 (224)
Q Consensus         4 ~~~l~~~~~~~i~~qi~~~l~~Lh~~~~~~i~H~dl~~~nil~~~~~~~kl~df~~~~~~~~~~~~~-------------   70 (224)
                      ++.+++..+..++.||+.||+|||+.|   |+||||||+||+++.++.++|+|||++..........             
T Consensus        95 ~~~l~~~~~~~~~~qi~~aL~~lH~~~---ivH~Dlkp~NIl~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~~~  171 (364)
T cd05599          95 KDTFTEEETRFYIAETILAIDSIHKLG---YIHRDIKPDNLLLDAKGHIKLSDFGLCTGLKKSHRTEFYRILSHALPSNF  171 (364)
T ss_pred             cCCCCHHHHHHHHHHHHHHHHHHHHCC---eEeccCCHHHeEECCCCCEEEeecccceeccccccccccccccccccccc
Confidence            457899999999999999999999999   9999999999999999999999999987543211000             


Q ss_pred             -----------------------cccccccccccCCcccccCCCcccccceEehhHHHHHHHhcccCCCCcCCCcccccc
Q 041793           71 -----------------------NTNRVIGTYGYMAPEYASDGKFSVKSDVFSFGILLLEIISGKKNRGFYHSDNKLNLI  127 (224)
Q Consensus        71 -----------------------~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~  127 (224)
                                             ......|++.|+|||++.+..++.++|+|||||++|+|++|..||...........+
T Consensus       172 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~el~~G~~Pf~~~~~~~~~~~i  251 (364)
T cd05599         172 LDFISKPMSSKRKAETWKRNRRALAYSTVGTPDYIAPEVFLQTGYNKECDWWSLGVIMYEMLVGYPPFCSDNPQETYRKI  251 (364)
T ss_pred             cccccccccccccccchhhcccccccccccCccccCHHHHcCCCCCCeeeeecchhHHHHhhcCCCCCCCCCHHHHHHHH
Confidence                                   011235789999999998888999999999999999999999998654322211111


Q ss_pred             cccCCCccccCccccCCcCHHHHHHHHHHHHHhccCCCCCCCC---hHHHHHH
Q 041793          128 GHVSMPSQLIDPCIQGSFNLVEVIRCIHIGLLCVQQHPKDRPS---MPSVILM  177 (224)
Q Consensus       128 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dp~~Rps---~~~v~~~  177 (224)
                      .........+. ..  ..+    ..+.+++.+|+. +|.+|++   ++++++.
T Consensus       252 ~~~~~~~~~~~-~~--~~s----~~~~~li~~ll~-~p~~R~~~~~~~~ll~h  296 (364)
T cd05599         252 INWKETLQFPD-EV--PLS----PEAKDLIKRLCC-EAERRLGNNGVNEIKSH  296 (364)
T ss_pred             HcCCCccCCCC-CC--CCC----HHHHHHHHHHcc-CHhhcCCCCCHHHHhcC
Confidence            11110001111 00  111    235678889986 9999998   8888763


No 175
>cd05071 PTKc_Src Catalytic domain of the Protein Tyrosine Kinase, Src. Protein Tyrosine Kinase (PTK) family; Src kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src (or c-Src) is a cytoplasmic (or non-receptor) tyr kinase, containing an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region with a conserved tyr. It is activated by autophosphorylation at the tyr kinase domain, and is negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). c-Src is the vertebrate homolog of the oncogenic protein (v-Src) from Rous sarcoma virus. Together with other Src subfamily proteins, it is invo
Probab=99.94  E-value=2.5e-27  Score=187.39  Aligned_cols=164  Identities=28%  Similarity=0.439  Sum_probs=123.3

Q ss_pred             CCCCChHHHHHHHHHHHHHHhhhhcCCCCceEecCCCCCceEECCCCCceEeeecceeecCCCCCCCcccccccccccCC
Q 041793            4 CKILDWPKRFHIICGTARGVMYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDEIEGNTNRVIGTYGYMA   83 (224)
Q Consensus         4 ~~~l~~~~~~~i~~qi~~~l~~Lh~~~~~~i~H~dl~~~nil~~~~~~~kl~df~~~~~~~~~~~~~~~~~~~~~~~y~a   83 (224)
                      ...+++.+++.++.|++.||+|||+.+   ++|+||+|+||+++.++.++|+|||.+......... ......++..|++
T Consensus        96 ~~~~~~~~~~~~~~~l~~aL~~lH~~~---i~H~dl~p~Nill~~~~~~~L~dfg~~~~~~~~~~~-~~~~~~~~~~y~~  171 (262)
T cd05071          96 GKYLRLPQLVDMAAQIASGMAYVERMN---YVHRDLRAANILVGENLVCKVADFGLARLIEDNEYT-ARQGAKFPIKWTA  171 (262)
T ss_pred             ccCCCHHHHHHHHHHHHHHHHHHHHCC---ccccccCcccEEEcCCCcEEeccCCceeeccccccc-cccCCcccceecC
Confidence            346889999999999999999999999   999999999999999999999999999765432211 1112234567999


Q ss_pred             cccccCCCcccccceEehhHHHHHHHh-cccCCCCcCCCcccccccccCCCccccCccccCCcCHHHHHHHHHHHHHhcc
Q 041793           84 PEYASDGKFSVKSDVFSFGILLLEIIS-GKKNRGFYHSDNKLNLIGHVSMPSQLIDPCIQGSFNLVEVIRCIHIGLLCVQ  162 (224)
Q Consensus        84 PE~~~~~~~~~~~Di~slG~il~~l~~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~  162 (224)
                      ||...+..++.++|+||||+++|++++ |..||........   ..........  +     ........+.+++.+||+
T Consensus       172 PE~~~~~~~~~~~DvwslG~~l~ellt~g~~p~~~~~~~~~---~~~~~~~~~~--~-----~~~~~~~~l~~li~~~l~  241 (262)
T cd05071         172 PEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREV---LDQVERGYRM--P-----CPPECPESLHDLMCQCWR  241 (262)
T ss_pred             HhHhccCCCCchhhHHHHHHHHHHHHcCCCCCCCCCChHHH---HHHHhcCCCC--C-----CccccCHHHHHHHHHHcc
Confidence            999888889999999999999999999 7778754332211   1111100000  0     011112356789999999


Q ss_pred             CCCCCCCChHHHHHHhccC
Q 041793          163 QHPKDRPSMPSVILMLGSE  181 (224)
Q Consensus       163 ~dp~~Rps~~~v~~~L~~~  181 (224)
                      .||++||++.++++.|+..
T Consensus       242 ~~p~~Rp~~~~~~~~l~~~  260 (262)
T cd05071         242 KEPEERPTFEYLQAFLEDY  260 (262)
T ss_pred             CCcccCCCHHHHHHHHHHh
Confidence            9999999999999998753


No 176
>cd06637 STKc_TNIK Catalytic domain of the Protein Serine/Threonine Kinase, Traf2- and Nck-interacting kinase. Serine/threonine kinases (STKs), Traf2- and Nck-interacting kinase (TNIK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TNIK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to mitogen-activated protein kinase (MAPK), kinase kinase kinase 4 (MAP4K4), and MAP4K6. MAP4Ks participate in some MAPK signaling pathways by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). TNIK is an effector of Rap2, a small GTP-binding protein from the Ras family. TNIK specifically activ
Probab=99.94  E-value=2.5e-27  Score=187.97  Aligned_cols=159  Identities=28%  Similarity=0.391  Sum_probs=118.6

Q ss_pred             CCCCChHHHHHHHHHHHHHHhhhhcCCCCceEecCCCCCceEECCCCCceEeeecceeecCCCCCCCcccccccccccCC
Q 041793            4 CKILDWPKRFHIICGTARGVMYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDEIEGNTNRVIGTYGYMA   83 (224)
Q Consensus         4 ~~~l~~~~~~~i~~qi~~~l~~Lh~~~~~~i~H~dl~~~nil~~~~~~~kl~df~~~~~~~~~~~~~~~~~~~~~~~y~a   83 (224)
                      ...+++..+..++.|++.||.|||+.+   |+|+||+|.||+++.++.++++|||++.......  .......++..|+|
T Consensus       105 ~~~l~~~~~~~~~~qi~~~l~~LH~~~---ivh~dl~~~nili~~~~~~~l~Dfg~~~~~~~~~--~~~~~~~g~~~y~a  179 (272)
T cd06637         105 GNTLKEEWIAYICREILRGLSHLHQHK---VIHRDIKGQNVLLTENAEVKLVDFGVSAQLDRTV--GRRNTFIGTPYWMA  179 (272)
T ss_pred             CCCCCHHHHHHHHHHHHHHHHHHHHCC---CccCCCCHHHEEECCCCCEEEccCCCceeccccc--ccCCcccccccccC
Confidence            356899999999999999999999999   9999999999999999999999999987653221  11223457788999


Q ss_pred             ccccc-----CCCcccccceEehhHHHHHHHhcccCCCCcCCCcccccccccCCCccccCccccCCcCHHHHHHHHHHHH
Q 041793           84 PEYAS-----DGKFSVKSDVFSFGILLLEIISGKKNRGFYHSDNKLNLIGHVSMPSQLIDPCIQGSFNLVEVIRCIHIGL  158 (224)
Q Consensus        84 PE~~~-----~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~  158 (224)
                      ||.+.     +..++.++|+|||||++|+|++|+.||................  .   ........    ...+.+|+.
T Consensus       180 PE~~~~~~~~~~~~~~~~Dv~slGv~l~el~~g~~p~~~~~~~~~~~~~~~~~--~---~~~~~~~~----~~~~~~li~  250 (272)
T cd06637         180 PEVIACDENPDATYDFKSDLWSLGITAIEMAEGAPPLCDMHPMRALFLIPRNP--A---PRLKSKKW----SKKFQSFIE  250 (272)
T ss_pred             HhHhccccCcCCCCCchhhHHHHHHHHHHHHhCCCCccccCHHHHHHHHhcCC--C---CCCCCCCc----CHHHHHHHH
Confidence            99886     3357789999999999999999999985433221111111000  0   00000111    124678999


Q ss_pred             HhccCCCCCCCChHHHHH
Q 041793          159 LCVQQHPKDRPSMPSVIL  176 (224)
Q Consensus       159 ~cl~~dp~~Rps~~~v~~  176 (224)
                      +||+.||.+|||+.++++
T Consensus       251 ~~l~~~p~~Rpt~~~il~  268 (272)
T cd06637         251 SCLVKNHSQRPTTEQLMK  268 (272)
T ss_pred             HHcCCChhhCCCHHHHhh
Confidence            999999999999999865


No 177
>cd08219 STKc_Nek3 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 3. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 3 (Nek3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek3 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek3 is primarily localized in the cytoplasm and shows no cell cycle-dependent changes in its activity. It is present in the axons of neurons and affects morphogenesis and polarity through its regulation of microtubule acetylation. Nek3 modulates the signaling of the prolactin receptor through its activati
Probab=99.94  E-value=1.4e-27  Score=187.76  Aligned_cols=160  Identities=24%  Similarity=0.363  Sum_probs=121.9

Q ss_pred             CCCCCChHHHHHHHHHHHHHHhhhhcCCCCceEecCCCCCceEECCCCCceEeeecceeecCCCCCCCcccccccccccC
Q 041793            3 RCKILDWPKRFHIICGTARGVMYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDEIEGNTNRVIGTYGYM   82 (224)
Q Consensus         3 ~~~~l~~~~~~~i~~qi~~~l~~Lh~~~~~~i~H~dl~~~nil~~~~~~~kl~df~~~~~~~~~~~~~~~~~~~~~~~y~   82 (224)
                      ....+++..++.++.||+.||.|||+.|   ++|+||+|+||+++.++.++++|||.+........  ......++..|+
T Consensus        93 ~~~~~~~~~~~~~~~~i~~al~~lH~~~---i~H~dl~p~nili~~~~~~~l~dfg~~~~~~~~~~--~~~~~~~~~~~~  167 (255)
T cd08219          93 RGKLFPEDTILQWFVQMCLGVQHIHEKR---VLHRDIKSKNIFLTQNGKVKLGDFGSARLLTSPGA--YACTYVGTPYYV  167 (255)
T ss_pred             cCCCCCHHHHHHHHHHHHHHHHHHhhCC---cccCCCCcceEEECCCCcEEEcccCcceeeccccc--ccccccCCcccc
Confidence            3456899999999999999999999999   99999999999999999999999999876543221  122345778899


Q ss_pred             CcccccCCCcccccceEehhHHHHHHHhcccCCCCcCCCcccccccccCCCccccCccccCCcCHHHHHHHHHHHHHhcc
Q 041793           83 APEYASDGKFSVKSDVFSFGILLLEIISGKKNRGFYHSDNKLNLIGHVSMPSQLIDPCIQGSFNLVEVIRCIHIGLLCVQ  162 (224)
Q Consensus        83 aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~  162 (224)
                      |||.+.+..++.++|+||||+++++|++|..||.................     .+ .....    ...+.+++.+||+
T Consensus       168 aPE~~~~~~~~~~~Dv~slG~i~~~l~~g~~p~~~~~~~~~~~~~~~~~~-----~~-~~~~~----~~~~~~li~~~l~  237 (255)
T cd08219         168 PPEIWENMPYNNKSDIWSLGCILYELCTLKHPFQANSWKNLILKVCQGSY-----KP-LPSHY----SYELRSLIKQMFK  237 (255)
T ss_pred             CHHHHccCCcCchhhhhhhchhheehhhccCCCCCCCHHHHHHHHhcCCC-----CC-CCccc----CHHHHHHHHHHHh
Confidence            99999888899999999999999999999999864322111111111110     00 01111    1246688999999


Q ss_pred             CCCCCCCChHHHHHH
Q 041793          163 QHPKDRPSMPSVILM  177 (224)
Q Consensus       163 ~dp~~Rps~~~v~~~  177 (224)
                      .||++||++.+|+..
T Consensus       238 ~~P~~Rp~~~~il~~  252 (255)
T cd08219         238 RNPRSRPSATTILSR  252 (255)
T ss_pred             CCcccCCCHHHHhhc
Confidence            999999999999764


No 178
>PTZ00426 cAMP-dependent protein kinase catalytic subunit; Provisional
Probab=99.94  E-value=1.8e-27  Score=195.00  Aligned_cols=156  Identities=23%  Similarity=0.231  Sum_probs=121.2

Q ss_pred             CCCCCChHHHHHHHHHHHHHHhhhhcCCCCceEecCCCCCceEECCCCCceEeeecceeecCCCCCCCcccccccccccC
Q 041793            3 RCKILDWPKRFHIICGTARGVMYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDEIEGNTNRVIGTYGYM   82 (224)
Q Consensus         3 ~~~~l~~~~~~~i~~qi~~~l~~Lh~~~~~~i~H~dl~~~nil~~~~~~~kl~df~~~~~~~~~~~~~~~~~~~~~~~y~   82 (224)
                      +.+.+++..+..++.||+.||.|||+.|   |+||||||+||+++.++.++|+|||++......     .....|++.|+
T Consensus       124 ~~~~~~~~~~~~~~~qi~~aL~~LH~~~---ivHrDLkp~NILl~~~~~ikL~DFG~a~~~~~~-----~~~~~gt~~y~  195 (340)
T PTZ00426        124 RNKRFPNDVGCFYAAQIVLIFEYLQSLN---IVYRDLKPENLLLDKDGFIKMTDFGFAKVVDTR-----TYTLCGTPEYI  195 (340)
T ss_pred             HcCCCCHHHHHHHHHHHHHHHHHHHHCC---eEccCCCHHHEEECCCCCEEEecCCCCeecCCC-----cceecCChhhc
Confidence            3467899999999999999999999999   999999999999999999999999999765321     22356788999


Q ss_pred             CcccccCCCcccccceEehhHHHHHHHhcccCCCCcCCCcccccccccCCCccccCccccCCcCHHHHHHHHHHHHHhcc
Q 041793           83 APEYASDGKFSVKSDVFSFGILLLEIISGKKNRGFYHSDNKLNLIGHVSMPSQLIDPCIQGSFNLVEVIRCIHIGLLCVQ  162 (224)
Q Consensus        83 aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~  162 (224)
                      |||.+.+..++.++|+|||||++|+|++|..||........   ...+.......    +...+    ..+.+++.+||+
T Consensus       196 aPE~~~~~~~~~~~DiwSlGvil~ell~G~~Pf~~~~~~~~---~~~i~~~~~~~----p~~~~----~~~~~li~~~l~  264 (340)
T PTZ00426        196 APEILLNVGHGKAADWWTLGIFIYEILVGCPPFYANEPLLI---YQKILEGIIYF----PKFLD----NNCKHLMKKLLS  264 (340)
T ss_pred             CHHHHhCCCCCccccccchhhHHHHHhcCCCCCCCCCHHHH---HHHHhcCCCCC----CCCCC----HHHHHHHHHHcc
Confidence            99999888899999999999999999999999864332211   11111111001    11111    235688899999


Q ss_pred             CCCCCCC-----ChHHHHHH
Q 041793          163 QHPKDRP-----SMPSVILM  177 (224)
Q Consensus       163 ~dp~~Rp-----s~~~v~~~  177 (224)
                      .||++|+     +++++++.
T Consensus       265 ~dp~~R~~~~~~~~~~~~~h  284 (340)
T PTZ00426        265 HDLTKRYGNLKKGAQNVKEH  284 (340)
T ss_pred             cCHHHcCCCCCCCHHHHHcC
Confidence            9999995     89988774


No 179
>KOG0603 consensus Ribosomal protein S6 kinase [Signal transduction mechanisms]
Probab=99.94  E-value=1.2e-27  Score=199.96  Aligned_cols=147  Identities=21%  Similarity=0.316  Sum_probs=118.2

Q ss_pred             HHHHHHHHHHHHHHhhhhcCCCCceEecCCCCCceEE-CCCCCceEeeecceeecCCCCCCCcccccccccccCCccccc
Q 041793           10 PKRFHIICGTARGVMYLHQDSRLRIIHRDLKASNVLL-DQDMNPKISDFGLARAFGGDEIEGNTNRVIGTYGYMAPEYAS   88 (224)
Q Consensus        10 ~~~~~i~~qi~~~l~~Lh~~~~~~i~H~dl~~~nil~-~~~~~~kl~df~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~   88 (224)
                      .++.+|+++|+.|+.|||++|   ++||||||.||++ +..+.++++|||.+......     .....-+..|.|||++.
T Consensus       415 ~e~~~w~~~lv~Av~~LH~~g---vvhRDLkp~NIL~~~~~g~lrltyFG~a~~~~~~-----~~tp~~t~~y~APEvl~  486 (612)
T KOG0603|consen  415 SEASQWAAELVSAVDYLHEQG---VVHRDLKPGNILLDGSAGHLRLTYFGFWSELERS-----CDTPALTLQYVAPEVLA  486 (612)
T ss_pred             HHHHHHHHHHHHHHHHHHhcC---eeecCCChhheeecCCCCcEEEEEechhhhCchh-----hcccchhhcccChhhhc
Confidence            677789999999999999999   9999999999999 68999999999999865433     11122367899999999


Q ss_pred             CCCcccccceEehhHHHHHHHhcccCCCCcCCCcccccccccCCCccccCccccCCcCHHHHHHHHHHHHHhccCCCCCC
Q 041793           89 DGKFSVKSDVFSFGILLLEIISGKKNRGFYHSDNKLNLIGHVSMPSQLIDPCIQGSFNLVEVIRCIHIGLLCVQQHPKDR  168 (224)
Q Consensus        89 ~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dp~~R  168 (224)
                      ..+++.++|+||||+++|+|++|..||.....+  .++...+..+..-      ...+    ....+|+.+||+.||.+|
T Consensus       487 ~~~yt~acD~WSLGvlLy~ML~G~tp~~~~P~~--~ei~~~i~~~~~s------~~vS----~~AKdLl~~LL~~dP~~R  554 (612)
T KOG0603|consen  487 IQEYTEACDWWSLGVLLYEMLTGRTLFAAHPAG--IEIHTRIQMPKFS------ECVS----DEAKDLLQQLLQVDPALR  554 (612)
T ss_pred             cCCCCcchhhHHHHHHHHHHHhCCCccccCCch--HHHHHhhcCCccc------cccC----HHHHHHHHHhccCChhhC
Confidence            999999999999999999999999999876655  3344434333221      1111    235688899999999999


Q ss_pred             CChHHHHH
Q 041793          169 PSMPSVIL  176 (224)
Q Consensus       169 ps~~~v~~  176 (224)
                      |++.++..
T Consensus       555 l~~~~i~~  562 (612)
T KOG0603|consen  555 LGADEIGA  562 (612)
T ss_pred             cChhhhcc
Confidence            99999865


No 180
>cd08529 STKc_FA2-like Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii FA2 and similar domains. Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii FA2-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii FA2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes FA2 and CNK4.  The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.  Chlamydomonas reinhardtii FA2 was discovered in a genetic screen for deflagellation-defective mutants. It is essential for basal-body/centriole-associated microtubule severing, and plays a role in cell cyc
Probab=99.94  E-value=2.9e-27  Score=185.84  Aligned_cols=159  Identities=25%  Similarity=0.400  Sum_probs=122.1

Q ss_pred             CCCCChHHHHHHHHHHHHHHhhhhcCCCCceEecCCCCCceEECCCCCceEeeecceeecCCCCCCCcccccccccccCC
Q 041793            4 CKILDWPKRFHIICGTARGVMYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDEIEGNTNRVIGTYGYMA   83 (224)
Q Consensus         4 ~~~l~~~~~~~i~~qi~~~l~~Lh~~~~~~i~H~dl~~~nil~~~~~~~kl~df~~~~~~~~~~~~~~~~~~~~~~~y~a   83 (224)
                      ...+++.+++.++.||+.||.|||+.|   ++|+||+|+||+++.++.++++|||++.........  .....++..|+|
T Consensus        95 ~~~~~~~~~~~i~~~l~~al~~lH~~~---i~h~dl~~~nili~~~~~~~l~df~~~~~~~~~~~~--~~~~~~~~~y~a  169 (256)
T cd08529          95 GRPLPEDQVWRFFIQILLGLAHLHSKK---ILHRDIKSLNLFLDAYDNVKIGDLGVAKLLSDNTNF--ANTIVGTPYYLS  169 (256)
T ss_pred             CCCCCHHHHHHHHHHHHHHHHHHHHCC---cccCCCCcceEEEeCCCCEEEcccccceeccCccch--hhccccCccccC
Confidence            467899999999999999999999999   999999999999999999999999998865432211  223456788999


Q ss_pred             cccccCCCcccccceEehhHHHHHHHhcccCCCCcCCCcccccccccCCCccccCccccCCcCHHHHHHHHHHHHHhccC
Q 041793           84 PEYASDGKFSVKSDVFSFGILLLEIISGKKNRGFYHSDNKLNLIGHVSMPSQLIDPCIQGSFNLVEVIRCIHIGLLCVQQ  163 (224)
Q Consensus        84 PE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~  163 (224)
                      ||.+.+..++.++|+||||+++++|++|+.||.......   .......  ..... ...    .....+.+++.+||+.
T Consensus       170 PE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~---~~~~~~~--~~~~~-~~~----~~~~~~~~~i~~~l~~  239 (256)
T cd08529         170 PELCEDKPYNEKSDVWALGVVLYECCTGKHPFDANNQGA---LILKIIR--GVFPP-VSQ----MYSQQLAQLIDQCLTK  239 (256)
T ss_pred             HHHhcCCCCCCccchHHHHHHHHHHHhCCCCCCCCCHHH---HHHHHHc--CCCCC-Ccc----ccCHHHHHHHHHHccC
Confidence            999988888999999999999999999999986443211   1111100  00000 111    1123577899999999


Q ss_pred             CCCCCCChHHHHHH
Q 041793          164 HPKDRPSMPSVILM  177 (224)
Q Consensus       164 dp~~Rps~~~v~~~  177 (224)
                      +|++||++.++++.
T Consensus       240 ~p~~Rp~~~~ll~~  253 (256)
T cd08529         240 DYRQRPDTFQLLRN  253 (256)
T ss_pred             CcccCcCHHHHhhC
Confidence            99999999999763


No 181
>cd05586 STKc_Sck1_like Catalytic domain of Suppressor of loss of cAMP-dependent protein kinase-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Fission yeast Suppressor of loss of cAMP-dependent protein kinase (Sck1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sck1-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of fungal proteins with similarity to the Schizosaccharomyces pombe STK Sck1. Sck1 plays a role in trehalase activation triggered by glucose and a nitrogen source. Trehalase catalyzes the cleavage of the disaccharide trehalose to glucose. Trehalose, as a carbohydrate reserve and stress metabolite, plays an important role in the response of
Probab=99.94  E-value=6.6e-28  Score=196.82  Aligned_cols=159  Identities=22%  Similarity=0.276  Sum_probs=117.4

Q ss_pred             CCCCCChHHHHHHHHHHHHHHhhhhcCCCCceEecCCCCCceEECCCCCceEeeecceeecCCCCCCCcccccccccccC
Q 041793            3 RCKILDWPKRFHIICGTARGVMYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDEIEGNTNRVIGTYGYM   82 (224)
Q Consensus         3 ~~~~l~~~~~~~i~~qi~~~l~~Lh~~~~~~i~H~dl~~~nil~~~~~~~kl~df~~~~~~~~~~~~~~~~~~~~~~~y~   82 (224)
                      +.+.+++..++.++.||+.||.|||+.|   |+||||||+||+++.++.++|+|||++.......  .......|+..|+
T Consensus        89 ~~~~~~~~~~~~~~~qil~al~~LH~~~---ivHrDlkp~Nili~~~~~~kl~Dfg~a~~~~~~~--~~~~~~~gt~~y~  163 (330)
T cd05586          89 KEGRFSEDRAKFYIAELVLALEHLHKYD---IVYRDLKPENILLDATGHIALCDFGLSKANLTDN--KTTNTFCGTTEYL  163 (330)
T ss_pred             hcCCCCHHHHHHHHHHHHHHHHHHHHCC---eEeccCCHHHeEECCCCCEEEecCCcCcCCCCCC--CCccCccCCcccc
Confidence            3467899999999999999999999999   9999999999999999999999999987532211  1122346788999


Q ss_pred             CcccccCC-CcccccceEehhHHHHHHHhcccCCCCcCCCcccccccccCCCccccCccccCCcCHHHHHHHHHHHHHhc
Q 041793           83 APEYASDG-KFSVKSDVFSFGILLLEIISGKKNRGFYHSDNKLNLIGHVSMPSQLIDPCIQGSFNLVEVIRCIHIGLLCV  161 (224)
Q Consensus        83 aPE~~~~~-~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl  161 (224)
                      |||.+.+. .++.++|+|||||++|+|++|+.||.......   ....+........   ....    ...+.+++.+||
T Consensus       164 aPE~~~~~~~~~~~~DvwslGvil~elltG~~Pf~~~~~~~---~~~~i~~~~~~~~---~~~~----~~~~~~li~~~L  233 (330)
T cd05586         164 APEVLLDEKGYTKHVDFWSLGVLVFEMCCGWSPFYAEDTQQ---MYRNIAFGKVRFP---KNVL----SDEGRQFVKGLL  233 (330)
T ss_pred             CHHHHcCCCCCCCccceeccccEEEEeccCCCCCCCCCHHH---HHHHHHcCCCCCC---CccC----CHHHHHHHHHHc
Confidence            99998754 47899999999999999999999985433221   1111111111010   0011    124567889999


Q ss_pred             cCCCCCCC----ChHHHHH
Q 041793          162 QQHPKDRP----SMPSVIL  176 (224)
Q Consensus       162 ~~dp~~Rp----s~~~v~~  176 (224)
                      +.||++||    ++.++++
T Consensus       234 ~~~P~~R~~~~~~~~~ll~  252 (330)
T cd05586         234 NRNPQHRLGAHRDAVELKE  252 (330)
T ss_pred             CCCHHHCCCCCCCHHHHhc
Confidence            99999998    4566654


No 182
>cd06619 PKc_MKK5 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 5. Protein kinases (PKs), MAP kinase kinase 5 (MKK5) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK5, also referred to as MEK5, is a dual-specificity PK that p
Probab=99.94  E-value=1.6e-27  Score=190.10  Aligned_cols=162  Identities=24%  Similarity=0.394  Sum_probs=120.1

Q ss_pred             CCCChHHHHHHHHHHHHHHhhhhcCCCCceEecCCCCCceEECCCCCceEeeecceeecCCCCCCCcccccccccccCCc
Q 041793            5 KILDWPKRFHIICGTARGVMYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDEIEGNTNRVIGTYGYMAP   84 (224)
Q Consensus         5 ~~l~~~~~~~i~~qi~~~l~~Lh~~~~~~i~H~dl~~~nil~~~~~~~kl~df~~~~~~~~~~~~~~~~~~~~~~~y~aP   84 (224)
                      ..+++..+..++.|++.||.|||+.|   ++|+||+|+||+++.++.++|+|||++.......    .....++..|+||
T Consensus        90 ~~~~~~~~~~~~~qi~~~l~~lH~~~---i~H~dlkp~Nill~~~~~~~l~dfg~~~~~~~~~----~~~~~~~~~y~aP  162 (279)
T cd06619          90 RKIPEHVLGRIAVAVVKGLTYLWSLK---ILHRDVKPSNMLVNTRGQVKLCDFGVSTQLVNSI----AKTYVGTNAYMAP  162 (279)
T ss_pred             hcCCHHHHHHHHHHHHHHHHHHHHCC---EeeCCCCHHHEEECCCCCEEEeeCCcceeccccc----ccCCCCChhhcCc
Confidence            35688899999999999999999999   9999999999999999999999999987653221    2224677899999


Q ss_pred             ccccCCCcccccceEehhHHHHHHHhcccCCCCcCCCcccccc-cccC-CCccccCccccCCcCHHHHHHHHHHHHHhcc
Q 041793           85 EYASDGKFSVKSDVFSFGILLLEIISGKKNRGFYHSDNKLNLI-GHVS-MPSQLIDPCIQGSFNLVEVIRCIHIGLLCVQ  162 (224)
Q Consensus        85 E~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~-~~~~-~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~  162 (224)
                      |.+.+..++.++|+||||+++|++++|+.||............ .... ..... ........   ....+.+++.+||+
T Consensus       163 E~~~~~~~~~~~DvwslG~~l~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~---~~~~~~~li~~~l~  238 (279)
T cd06619         163 ERISGEQYGIHSDVWSLGISFMELALGRFPYPQIQKNQGSLMPLQLLQCIVDED-PPVLPVGQ---FSEKFVHFITQCMR  238 (279)
T ss_pred             eeecCCCCCCcchHHHHHHHHHHHHhCCCCchhhcccccccchHHHHHHHhccC-CCCCCCCc---CCHHHHHHHHHHhh
Confidence            9998888999999999999999999999998653322111000 0000 00000 00110000   11246788899999


Q ss_pred             CCCCCCCChHHHHHH
Q 041793          163 QHPKDRPSMPSVILM  177 (224)
Q Consensus       163 ~dp~~Rps~~~v~~~  177 (224)
                      .+|++||+++++++.
T Consensus       239 ~~P~~Rp~~~eil~~  253 (279)
T cd06619         239 KQPKERPAPENLMDH  253 (279)
T ss_pred             CChhhCCCHHHHhcC
Confidence            999999999999764


No 183
>cd06650 PKc_MEK1 Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase 1. Protein kinases (PKs), MAP/ERK kinase (MEK) 1 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK1 is a dual-specificity PK that phosphorylates and activates the downst
Probab=99.94  E-value=3e-27  Score=193.28  Aligned_cols=108  Identities=29%  Similarity=0.464  Sum_probs=93.3

Q ss_pred             CCCCChHHHHHHHHHHHHHHhhhhcC-CCCceEecCCCCCceEECCCCCceEeeecceeecCCCCCCCcccccccccccC
Q 041793            4 CKILDWPKRFHIICGTARGVMYLHQD-SRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDEIEGNTNRVIGTYGYM   82 (224)
Q Consensus         4 ~~~l~~~~~~~i~~qi~~~l~~Lh~~-~~~~i~H~dl~~~nil~~~~~~~kl~df~~~~~~~~~~~~~~~~~~~~~~~y~   82 (224)
                      .+.+++..+..++.|++.||.|||+. +   ++|+||||+||+++.++.++|+|||++.......    .....++..|+
T Consensus        97 ~~~~~~~~~~~~~~~l~~~l~~lH~~~~---ivH~dlkp~Nili~~~~~~kL~Dfg~~~~~~~~~----~~~~~~~~~y~  169 (333)
T cd06650          97 AGRIPEQILGKVSIAVIKGLTYLREKHK---IMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSM----ANSFVGTRSYM  169 (333)
T ss_pred             cCCCCHHHHHHHHHHHHHHHHHHHhcCC---EEecCCChhhEEEcCCCCEEEeeCCcchhhhhhc----cccCCCCcccc
Confidence            45688999999999999999999975 6   9999999999999999999999999987543221    22245788999


Q ss_pred             CcccccCCCcccccceEehhHHHHHHHhcccCCCCc
Q 041793           83 APEYASDGKFSVKSDVFSFGILLLEIISGKKNRGFY  118 (224)
Q Consensus        83 aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~  118 (224)
                      |||.+.+..++.++|+|||||++|++++|+.||...
T Consensus       170 aPE~~~~~~~~~~~DvwslG~il~~l~~g~~p~~~~  205 (333)
T cd06650         170 SPERLQGTHYSVQSDIWSMGLSLVEMAIGRYPIPPP  205 (333)
T ss_pred             CHHHhcCCCCCcHHHHHHHHHHHHHHHHCCCCCCCc
Confidence            999998888999999999999999999999998643


No 184
>cd05065 PTKc_EphR_B Catalytic domain of the Protein Tyrosine Kinases, Class EphB Ephrin Receptors. Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; class EphB receptors; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). Class EphB receptors bind to transmembrane ephrin-B ligands. There are six vertebrate EhpB receptors (EphB1-6), which display promiscuous interactions with three ephrin-B ligands. One exception is EphB2, which also interacts with ephrin A5. EphRs contain an ephrin-binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephr
Probab=99.94  E-value=4.9e-27  Score=186.19  Aligned_cols=165  Identities=26%  Similarity=0.384  Sum_probs=121.9

Q ss_pred             CCCCChHHHHHHHHHHHHHHhhhhcCCCCceEecCCCCCceEECCCCCceEeeecceeecCCCCCCCcccccc---cccc
Q 041793            4 CKILDWPKRFHIICGTARGVMYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDEIEGNTNRVI---GTYG   80 (224)
Q Consensus         4 ~~~l~~~~~~~i~~qi~~~l~~Lh~~~~~~i~H~dl~~~nil~~~~~~~kl~df~~~~~~~~~~~~~~~~~~~---~~~~   80 (224)
                      .+.+++.+++.++.|++.||+|||+.|   ++|+||+|+||+++.++.++++|||++................   .+..
T Consensus       100 ~~~~~~~~~~~i~~~l~~al~~lH~~g---~~H~dl~p~nili~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~  176 (269)
T cd05065         100 DGQFTVIQLVGMLRGIAAGMKYLSEMN---YVHRDLAARNILVNSNLVCKVSDFGLSRFLEDDTSDPTYTSSLGGKIPIR  176 (269)
T ss_pred             CCCCCHHHHHHHHHHHHHHHHHHHHCC---EeecccChheEEEcCCCcEEECCCccccccccCccccccccccCCCccee
Confidence            456899999999999999999999999   9999999999999999999999999987654322111111111   1346


Q ss_pred             cCCcccccCCCcccccceEehhHHHHHHHh-cccCCCCcCCCcccccccccCCCccccCccccCCcCHHHHHHHHHHHHH
Q 041793           81 YMAPEYASDGKFSVKSDVFSFGILLLEIIS-GKKNRGFYHSDNKLNLIGHVSMPSQLIDPCIQGSFNLVEVIRCIHIGLL  159 (224)
Q Consensus        81 y~aPE~~~~~~~~~~~Di~slG~il~~l~~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~  159 (224)
                      |++||.+.+..++.++|+||||++++++++ |..||...........+...   .....   ....+    ..+.+++.+
T Consensus       177 y~~PE~~~~~~~~~~~DvwslG~~l~e~l~~g~~p~~~~~~~~~~~~i~~~---~~~~~---~~~~~----~~~~~li~~  246 (269)
T cd05065         177 WTAPEAIAYRKFTSASDVWSYGIVMWEVMSYGERPYWDMSNQDVINAIEQD---YRLPP---PMDCP----TALHQLMLD  246 (269)
T ss_pred             ecCHhHhccCcccchhhhhhhHHHHHHHhcCCCCCCCCCCHHHHHHHHHcC---CcCCC---cccCC----HHHHHHHHH
Confidence            999999988889999999999999999886 88887543322221111111   01000   01111    235688899


Q ss_pred             hccCCCCCCCChHHHHHHhccC
Q 041793          160 CVQQHPKDRPSMPSVILMLGSE  181 (224)
Q Consensus       160 cl~~dp~~Rps~~~v~~~L~~~  181 (224)
                      ||+.+|++||++++|+..|+..
T Consensus       247 ~l~~~p~~Rp~~~~i~~~l~~~  268 (269)
T cd05065         247 CWQKDRNARPKFGQIVSTLDKM  268 (269)
T ss_pred             HcCCChhhCcCHHHHHHHHHhh
Confidence            9999999999999999998653


No 185
>cd05085 PTKc_Fer Catalytic domain of the Protein Tyrosine Kinase, Fer. Protein Tyrosine Kinase (PTK) family; Fer kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fer kinase is a member of the Fes subfamily of proteins which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. Fer kinase is expressed in a wide variety of tissues, and is found to reside in both the cytoplasm and the nucleus. It plays important roles in neuronal polarization and neurite development, cytoskeletal reorganization, cell migration, growth factor signaling, and the regulation of cell-c
Probab=99.94  E-value=4.7e-27  Score=184.23  Aligned_cols=162  Identities=25%  Similarity=0.326  Sum_probs=121.6

Q ss_pred             CCCCChHHHHHHHHHHHHHHhhhhcCCCCceEecCCCCCceEECCCCCceEeeecceeecCCCCCCCcccccccccccCC
Q 041793            4 CKILDWPKRFHIICGTARGVMYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDEIEGNTNRVIGTYGYMA   83 (224)
Q Consensus         4 ~~~l~~~~~~~i~~qi~~~l~~Lh~~~~~~i~H~dl~~~nil~~~~~~~kl~df~~~~~~~~~~~~~~~~~~~~~~~y~a   83 (224)
                      ...+++.+++.++.|++.||.|||+.|   ++|+||+|+||+++.++.++++|||++......... ......++..|+|
T Consensus        87 ~~~~~~~~~~~~~~~i~~~l~~lH~~~---~~H~dl~p~nili~~~~~~~l~d~g~~~~~~~~~~~-~~~~~~~~~~y~a  162 (250)
T cd05085          87 KDELKTKQLVKFALDAAAGMAYLESKN---CIHRDLAARNCLVGENNVLKISDFGMSRQEDDGIYS-SSGLKQIPIKWTA  162 (250)
T ss_pred             CCCCCHHHHHHHHHHHHHHHHHHHhCC---eeecccChheEEEcCCCeEEECCCccceeccccccc-cCCCCCCcccccC
Confidence            346889999999999999999999999   999999999999999999999999998764332211 1111233567999


Q ss_pred             cccccCCCcccccceEehhHHHHHHHh-cccCCCCcCCCcccccccccCCCccccCccccCCcCHHHHHHHHHHHHHhcc
Q 041793           84 PEYASDGKFSVKSDVFSFGILLLEIIS-GKKNRGFYHSDNKLNLIGHVSMPSQLIDPCIQGSFNLVEVIRCIHIGLLCVQ  162 (224)
Q Consensus        84 PE~~~~~~~~~~~Di~slG~il~~l~~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~  162 (224)
                      ||.+.+..++.++|+||||++++++++ |..||...........+....   ..   ......    ...+.+++.+||+
T Consensus       163 PE~~~~~~~~~~~Di~slG~ll~~~~~~g~~p~~~~~~~~~~~~~~~~~---~~---~~~~~~----~~~~~~li~~~l~  232 (250)
T cd05085         163 PEALNYGRYSSESDVWSYGILLWETFSLGVCPYPGMTNQQAREQVEKGY---RM---SCPQKC----PDDVYKVMQRCWD  232 (250)
T ss_pred             HHHhccCCCCchhHHHHHHHHHHHHhcCCCCCCCCCCHHHHHHHHHcCC---CC---CCCCCC----CHHHHHHHHHHcc
Confidence            999988888999999999999999998 888875432221111111111   00   001111    2357789999999


Q ss_pred             CCCCCCCChHHHHHHhc
Q 041793          163 QHPKDRPSMPSVILMLG  179 (224)
Q Consensus       163 ~dp~~Rps~~~v~~~L~  179 (224)
                      .+|++||++.++++.|.
T Consensus       233 ~~p~~Rp~~~~l~~~l~  249 (250)
T cd05085         233 YKPENRPKFSELQKELA  249 (250)
T ss_pred             cCcccCCCHHHHHHHhc
Confidence            99999999999999875


No 186
>cd08223 STKc_Nek4 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 4. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 4 (Nek4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek4 subfamily is one of a family of 11 different Neks (Nek1-11). The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Neks are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. Nek4 is highly abundant in the testis. Its specific function is unknown.
Probab=99.94  E-value=4e-27  Score=185.22  Aligned_cols=158  Identities=27%  Similarity=0.345  Sum_probs=121.5

Q ss_pred             CCCCChHHHHHHHHHHHHHHhhhhcCCCCceEecCCCCCceEECCCCCceEeeecceeecCCCCCCCcccccccccccCC
Q 041793            4 CKILDWPKRFHIICGTARGVMYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDEIEGNTNRVIGTYGYMA   83 (224)
Q Consensus         4 ~~~l~~~~~~~i~~qi~~~l~~Lh~~~~~~i~H~dl~~~nil~~~~~~~kl~df~~~~~~~~~~~~~~~~~~~~~~~y~a   83 (224)
                      .+.+++.+++.++.|++.||.+||+.|   ++|+||+|+||+++.++.++|+|||++........  ......++..|+|
T Consensus        96 ~~~l~~~~~~~~~~~l~~~l~~lH~~~---i~H~di~p~nil~~~~~~~~l~df~~~~~~~~~~~--~~~~~~~~~~y~a  170 (257)
T cd08223          96 GKLLPENQVVEWFVQIAMALQYLHEKH---ILHRDLKTQNVFLTRTNIIKVGDLGIARVLENQCD--MASTLIGTPYYMS  170 (257)
T ss_pred             CCCCCHHHHHHHHHHHHHHHHHHHhCC---eeccCCCchhEEEecCCcEEEecccceEEecccCC--ccccccCCcCccC
Confidence            456899999999999999999999999   99999999999999999999999999886643221  2223456788999


Q ss_pred             cccccCCCcccccceEehhHHHHHHHhcccCCCCcCCCcccccccccCCCccccCccccCCcCHHHHHHHHHHHHHhccC
Q 041793           84 PEYASDGKFSVKSDVFSFGILLLEIISGKKNRGFYHSDNKLNLIGHVSMPSQLIDPCIQGSFNLVEVIRCIHIGLLCVQQ  163 (224)
Q Consensus        84 PE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~  163 (224)
                      ||.+.+..++.++|+||||++++++++|+.||..............    .....  ...    .....+.+++.+||+.
T Consensus       171 PE~~~~~~~~~~~Dv~slG~il~~l~~g~~~~~~~~~~~~~~~~~~----~~~~~--~~~----~~~~~~~~li~~~l~~  240 (257)
T cd08223         171 PELFSNKPYNYKSDVWALGCCVYEMATLKHAFNAKDMNSLVYRIIE----GKLPP--MPK----DYSPELGELIATMLSK  240 (257)
T ss_pred             hhHhcCCCCCchhhhHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHh----cCCCC--Ccc----ccCHHHHHHHHHHhcc
Confidence            9999888889999999999999999999999754322111111000    00100  111    1123577899999999


Q ss_pred             CCCCCCChHHHHH
Q 041793          164 HPKDRPSMPSVIL  176 (224)
Q Consensus       164 dp~~Rps~~~v~~  176 (224)
                      ||++||++.++++
T Consensus       241 ~p~~Rp~~~~~l~  253 (257)
T cd08223         241 RPEKRPSVKSILR  253 (257)
T ss_pred             CcccCCCHHHHhc
Confidence            9999999999975


No 187
>cd05039 PTKc_Csk_like Catalytic domain of C-terminal Src kinase-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; C-terminal Src kinase (Csk) subfamily; catalytic (c) domain. The Csk subfamily is composed of Csk, Chk, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk and Chk are translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk 
Probab=99.94  E-value=4.2e-27  Score=185.18  Aligned_cols=158  Identities=28%  Similarity=0.393  Sum_probs=122.2

Q ss_pred             CCCChHHHHHHHHHHHHHHhhhhcCCCCceEecCCCCCceEECCCCCceEeeecceeecCCCCCCCcccccccccccCCc
Q 041793            5 KILDWPKRFHIICGTARGVMYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDEIEGNTNRVIGTYGYMAP   84 (224)
Q Consensus         5 ~~l~~~~~~~i~~qi~~~l~~Lh~~~~~~i~H~dl~~~nil~~~~~~~kl~df~~~~~~~~~~~~~~~~~~~~~~~y~aP   84 (224)
                      +.+++..++.++.|++.||.|||+.+   ++|+||+|+||+++.++.++++|||.+........     ....+..|+||
T Consensus        97 ~~~~~~~~~~~~~qi~~~l~~lh~~~---i~H~di~p~Nili~~~~~~~l~d~g~~~~~~~~~~-----~~~~~~~~~ap  168 (256)
T cd05039          97 AVITLAQQLGFALDVCEGMEYLEEKN---FVHRDLAARNVLVSEDLVAKVSDFGLAKEASQGQD-----SGKLPVKWTAP  168 (256)
T ss_pred             CCCCHHHHHHHHHHHHHHHHHHHhCC---ccchhcccceEEEeCCCCEEEcccccccccccccc-----cCCCcccccCc
Confidence            36899999999999999999999999   99999999999999999999999999986532211     12335679999


Q ss_pred             ccccCCCcccccceEehhHHHHHHHh-cccCCCCcCCCcccccccccCCCccccCccccCCcCHHHHHHHHHHHHHhccC
Q 041793           85 EYASDGKFSVKSDVFSFGILLLEIIS-GKKNRGFYHSDNKLNLIGHVSMPSQLIDPCIQGSFNLVEVIRCIHIGLLCVQQ  163 (224)
Q Consensus        85 E~~~~~~~~~~~Di~slG~il~~l~~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~  163 (224)
                      |.+.+..++.++|+||||++++++++ |..||................. ..     .....    ...+.+++.+||..
T Consensus       169 e~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~~~~~~~~~~~~-~~-----~~~~~----~~~~~~li~~~l~~  238 (256)
T cd05039         169 EALREKKFSTKSDVWSFGILLWEIYSFGRVPYPRIPLKDVVPHVEKGYR-ME-----APEGC----PPEVYKVMKDCWEL  238 (256)
T ss_pred             hhhcCCcCCcHHHHHHHHHHHHHHHhcCCCCCCCCCHHHHHHHHhcCCC-CC-----CccCC----CHHHHHHHHHHhcc
Confidence            99988888999999999999999997 8888765432222111111100 00     01111    13467899999999


Q ss_pred             CCCCCCChHHHHHHhcc
Q 041793          164 HPKDRPSMPSVILMLGS  180 (224)
Q Consensus       164 dp~~Rps~~~v~~~L~~  180 (224)
                      +|++||++.++++.|+.
T Consensus       239 ~p~~Rp~~~~l~~~l~~  255 (256)
T cd05039         239 DPAKRPTFKQLREQLAL  255 (256)
T ss_pred             ChhhCcCHHHHHHHHhc
Confidence            99999999999999865


No 188
>cd05596 STKc_ROCK Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase. Serine/Threonine Kinases (STKs), Rho-associated coiled-coil containing protein kinase (ROCK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK is also referred to as Rho-associated kinase or simply as Rho kinase. It contains an N-terminal extension, a catalytic kinase domain, and a long C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain. It is activated via in
Probab=99.94  E-value=6e-27  Score=194.06  Aligned_cols=161  Identities=17%  Similarity=0.221  Sum_probs=119.1

Q ss_pred             CCCChHHHHHHHHHHHHHHhhhhcCCCCceEecCCCCCceEECCCCCceEeeecceeecCCCCCCCcccccccccccCCc
Q 041793            5 KILDWPKRFHIICGTARGVMYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDEIEGNTNRVIGTYGYMAP   84 (224)
Q Consensus         5 ~~l~~~~~~~i~~qi~~~l~~Lh~~~~~~i~H~dl~~~nil~~~~~~~kl~df~~~~~~~~~~~~~~~~~~~~~~~y~aP   84 (224)
                      ..+++..+..++.||+.||+|||+.|   |+||||||+||+++.++.++|+|||++......... ......|++.|+||
T Consensus       137 ~~l~~~~~~~~~~qi~~aL~~LH~~~---ivHrDLkp~NILl~~~~~~kL~DfG~~~~~~~~~~~-~~~~~~gt~~y~aP  212 (370)
T cd05596         137 YDIPEKWARFYTAEVVLALDAIHSMG---FIHRDVKPDNMLLDKSGHLKLADFGTCMKMDANGMV-RCDTAVGTPDYISP  212 (370)
T ss_pred             cCCCHHHHHHHHHHHHHHHHHHHHCC---eeccCCCHHHEEEcCCCCEEEEeccceeeccCCCcc-cCCCCCCCcCeECH
Confidence            45788899999999999999999999   999999999999999999999999999865432211 12234678999999


Q ss_pred             ccccCC----CcccccceEehhHHHHHHHhcccCCCCcCCCcccccccccCC-CccccCccccCCcCHHHHHHHHHHHHH
Q 041793           85 EYASDG----KFSVKSDVFSFGILLLEIISGKKNRGFYHSDNKLNLIGHVSM-PSQLIDPCIQGSFNLVEVIRCIHIGLL  159 (224)
Q Consensus        85 E~~~~~----~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~li~~  159 (224)
                      |.+.+.    .++.++|+|||||++|+|++|+.||........   ...+.. .....   .+....  ....+.+++.+
T Consensus       213 E~~~~~~~~~~~~~~~DiwSlGvilyelltG~~Pf~~~~~~~~---~~~i~~~~~~~~---~~~~~~--~s~~~~~li~~  284 (370)
T cd05596         213 EVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTPFYADSLVGT---YSKIMDHKNSLT---FPDDIE--ISKQAKDLICA  284 (370)
T ss_pred             HHhccCCCCCCCCCceeeeehhHHHHHHHhCCCCcCCCCHHHH---HHHHHcCCCcCC---CCCcCC--CCHHHHHHHHH
Confidence            998653    368899999999999999999999865332211   111110 00110   011000  12346688899


Q ss_pred             hccCCCCC--CCChHHHHHH
Q 041793          160 CVQQHPKD--RPSMPSVILM  177 (224)
Q Consensus       160 cl~~dp~~--Rps~~~v~~~  177 (224)
                      ||+.+|++  |+++.++++.
T Consensus       285 ~L~~~p~r~~R~s~~ell~h  304 (370)
T cd05596         285 FLTDREVRLGRNGVDEIKSH  304 (370)
T ss_pred             HccChhhccCCCCHHHHhcC
Confidence            99999998  9999999764


No 189
>cd06654 STKc_PAK1 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 1. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 1, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK1 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding 
Probab=99.94  E-value=3.6e-27  Score=189.73  Aligned_cols=160  Identities=22%  Similarity=0.317  Sum_probs=119.8

Q ss_pred             CCCChHHHHHHHHHHHHHHhhhhcCCCCceEecCCCCCceEECCCCCceEeeecceeecCCCCCCCcccccccccccCCc
Q 041793            5 KILDWPKRFHIICGTARGVMYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDEIEGNTNRVIGTYGYMAP   84 (224)
Q Consensus         5 ~~l~~~~~~~i~~qi~~~l~~Lh~~~~~~i~H~dl~~~nil~~~~~~~kl~df~~~~~~~~~~~~~~~~~~~~~~~y~aP   84 (224)
                      ..+++.+++.++.|++.||.|||+.|   |+|+||+|+||+++.++.++++|||++.........  .....++..|+||
T Consensus       111 ~~~~~~~~~~i~~ql~~aL~~LH~~g---i~H~dLkp~Nill~~~~~~kl~dfg~~~~~~~~~~~--~~~~~~~~~y~aP  185 (296)
T cd06654         111 TCMDEGQIAAVCRECLQALEFLHSNQ---VIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQSK--RSTMVGTPYWMAP  185 (296)
T ss_pred             cCCCHHHHHHHHHHHHHHHHHHHHCC---cccCCCCHHHEEEcCCCCEEECccccchhccccccc--cCcccCCccccCH
Confidence            45789999999999999999999999   999999999999999999999999988754322111  1223567789999


Q ss_pred             ccccCCCcccccceEehhHHHHHHHhcccCCCCcCCCcccccccccCCCccccCccccCCcCHHHHHHHHHHHHHhccCC
Q 041793           85 EYASDGKFSVKSDVFSFGILLLEIISGKKNRGFYHSDNKLNLIGHVSMPSQLIDPCIQGSFNLVEVIRCIHIGLLCVQQH  164 (224)
Q Consensus        85 E~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~d  164 (224)
                      |.+.+..++.++|+||||+++|++++|+.||.........  ........  ..  ...  .......+.+++.+||..|
T Consensus       186 E~~~~~~~~~~~Dv~s~Gvil~~l~~g~~pf~~~~~~~~~--~~~~~~~~--~~--~~~--~~~~~~~l~~li~~~l~~~  257 (296)
T cd06654         186 EVVTRKAYGPKVDIWSLGIMAIEMIEGEPPYLNENPLRAL--YLIATNGT--PE--LQN--PEKLSAIFRDFLNRCLDMD  257 (296)
T ss_pred             HHHcCCCCCccchHHHHHHHHHHHHhCCCCCCCCCHHHhH--HHHhcCCC--CC--CCC--ccccCHHHHHHHHHHCcCC
Confidence            9998888899999999999999999999998543321111  11000000  00  000  0011234678899999999


Q ss_pred             CCCCCChHHHHHH
Q 041793          165 PKDRPSMPSVILM  177 (224)
Q Consensus       165 p~~Rps~~~v~~~  177 (224)
                      |++||++.++++.
T Consensus       258 p~~Rpt~~eil~~  270 (296)
T cd06654         258 VEKRGSAKELLQH  270 (296)
T ss_pred             cccCcCHHHHhhC
Confidence            9999999999873


No 190
>KOG0694 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.94  E-value=2.5e-27  Score=199.37  Aligned_cols=153  Identities=25%  Similarity=0.384  Sum_probs=123.3

Q ss_pred             CCCCCChHHHHHHHHHHHHHHhhhhcCCCCceEecCCCCCceEECCCCCceEeeecceeecCCCCCCCcccccccccccC
Q 041793            3 RCKILDWPKRFHIICGTARGVMYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDEIEGNTNRVIGTYGYM   82 (224)
Q Consensus         3 ~~~~l~~~~~~~i~~qi~~~l~~Lh~~~~~~i~H~dl~~~nil~~~~~~~kl~df~~~~~~~~~~~~~~~~~~~~~~~y~   82 (224)
                      +.+.|++..+..+++.|+.||.|||++|   |++||||.+|||+|..|.+||+|||++..-...  .....++-||+.|+
T Consensus       461 ~~~~F~e~rarfyaAev~l~L~fLH~~~---IIYRDlKLdNiLLD~eGh~kiADFGlcKe~m~~--g~~TsTfCGTpey~  535 (694)
T KOG0694|consen  461 HTDVFSEPRARFYAAEVVLGLQFLHENG---IIYRDLKLDNLLLDTEGHVKIADFGLCKEGMGQ--GDRTSTFCGTPEFL  535 (694)
T ss_pred             ecccccHHHHHHHHHHHHHHHHHHHhcC---ceeeecchhheEEcccCcEEecccccccccCCC--CCccccccCChhhc
Confidence            4578999999999999999999999999   999999999999999999999999999864322  22455678999999


Q ss_pred             CcccccCCCcccccceEehhHHHHHHHhcccCCCCcCCCcccccccccCCCccccCccccCCcCHHHHHHHHHHHHHhcc
Q 041793           83 APEYASDGKFSVKSDVFSFGILLLEIISGKKNRGFYHSDNKLNLIGHVSMPSQLIDPCIQGSFNLVEVIRCIHIGLLCVQ  162 (224)
Q Consensus        83 aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~  162 (224)
                      |||++.+..|+.+.|.|+|||++|||+.|+.||.+.+.++...-+.......       +...    ....++|++++|.
T Consensus       536 aPEil~e~~Yt~aVDWW~lGVLlyeML~Gq~PF~gddEee~FdsI~~d~~~y-------P~~l----s~ea~~il~~ll~  604 (694)
T KOG0694|consen  536 APEVLTEQSYTRAVDWWGLGVLLYEMLVGESPFPGDDEEEVFDSIVNDEVRY-------PRFL----SKEAIAIMRRLLR  604 (694)
T ss_pred             ChhhhccCcccchhhHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHhcCCCCC-------CCcc----cHHHHHHHHHHhc
Confidence            9999999999999999999999999999999987655444333221111100       1111    2346788999999


Q ss_pred             CCCCCCCCh
Q 041793          163 QHPKDRPSM  171 (224)
Q Consensus       163 ~dp~~Rps~  171 (224)
                      .+|++|...
T Consensus       605 k~p~kRLG~  613 (694)
T KOG0694|consen  605 KNPEKRLGS  613 (694)
T ss_pred             cCcccccCC
Confidence            999999755


No 191
>cd05073 PTKc_Hck Catalytic domain of the Protein Tyrosine Kinase, Hematopoietic cell kinase. Protein Tyrosine Kinase (PTK) family; Hematopoietic cell kinase (Hck); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Hck is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pa
Probab=99.94  E-value=5.2e-27  Score=185.20  Aligned_cols=163  Identities=29%  Similarity=0.461  Sum_probs=122.6

Q ss_pred             CCCCChHHHHHHHHHHHHHHhhhhcCCCCceEecCCCCCceEECCCCCceEeeecceeecCCCCCCCcccccccccccCC
Q 041793            4 CKILDWPKRFHIICGTARGVMYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDEIEGNTNRVIGTYGYMA   83 (224)
Q Consensus         4 ~~~l~~~~~~~i~~qi~~~l~~Lh~~~~~~i~H~dl~~~nil~~~~~~~kl~df~~~~~~~~~~~~~~~~~~~~~~~y~a   83 (224)
                      ...+++.+++.++.|++.||.|||+.|   ++|+||+|+||+++.++.++++|||.+......... ......++..|++
T Consensus        96 ~~~~~~~~~~~~~~~l~~aL~~lH~~~---i~H~dl~p~ni~i~~~~~~~l~d~~~~~~~~~~~~~-~~~~~~~~~~y~~  171 (260)
T cd05073          96 GSKQPLPKLIDFSAQIAEGMAFIEQRN---YIHRDLRAANILVSASLVCKIADFGLARVIEDNEYT-AREGAKFPIKWTA  171 (260)
T ss_pred             ccccCHHHHHHHHHHHHHHHHHHHhCC---ccccccCcceEEEcCCCcEEECCCcceeeccCCCcc-cccCCcccccccC
Confidence            456788999999999999999999999   999999999999999999999999998765432211 1112234567999


Q ss_pred             cccccCCCcccccceEehhHHHHHHHh-cccCCCCcCCCcccccccccCCCccccCccccCCcCHHHHHHHHHHHHHhcc
Q 041793           84 PEYASDGKFSVKSDVFSFGILLLEIIS-GKKNRGFYHSDNKLNLIGHVSMPSQLIDPCIQGSFNLVEVIRCIHIGLLCVQ  162 (224)
Q Consensus        84 PE~~~~~~~~~~~Di~slG~il~~l~~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~  162 (224)
                      ||.+.+..++.++|+||||++++++++ |..||................   ..  + ....    ....+.+++.+||+
T Consensus       172 PE~~~~~~~~~~~Di~slG~~l~~l~t~g~~p~~~~~~~~~~~~~~~~~---~~--~-~~~~----~~~~~~~~i~~~l~  241 (260)
T cd05073         172 PEAINFGSFTIKSDVWSFGILLMEIVTYGRIPYPGMSNPEVIRALERGY---RM--P-RPEN----CPEELYNIMMRCWK  241 (260)
T ss_pred             HhHhccCCcCccccchHHHHHHHHHHhcCCCCCCCCCHHHHHHHHhCCC---CC--C-Cccc----CCHHHHHHHHHHcc
Confidence            999988888999999999999999998 888875433221111111110   00  0 0011    12346788899999


Q ss_pred             CCCCCCCChHHHHHHhcc
Q 041793          163 QHPKDRPSMPSVILMLGS  180 (224)
Q Consensus       163 ~dp~~Rps~~~v~~~L~~  180 (224)
                      .+|++||++.++.+.|+.
T Consensus       242 ~~p~~Rp~~~~l~~~L~~  259 (260)
T cd05073         242 NRPEERPTFEYIQSVLDD  259 (260)
T ss_pred             cCcccCcCHHHHHHHHhc
Confidence            999999999999999864


No 192
>PF00069 Pkinase:  Protein kinase domain Protein kinase; unclassified specificity. Serine/Threonine protein kinases, catalytic domain Tyrosine kinase, catalytic domain;  InterPro: IPR017442 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []:   Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins)   Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. Eukaryotic protein kinases [, , , , ] are enzymes that belong to a very extensive family of proteins which share a conserved catalytic core common with both serine/threonine and tyrosine protein kinases. There are a number of conserved regions in the catalytic domain of protein kinases. In the N-terminal extremity of the catalytic domain there is a glycine-rich stretch of residues in the vicinity of a lysine residue, which has been shown to be involved in ATP binding. In the central part of the catalytic domain there is a conserved aspartic acid residue which is important for the catalytic activity of the enzyme []. This entry includes protein kinases from eukaryotes and viruses and may include some bacterial hits too.; GO: 0004672 protein kinase activity, 0005524 ATP binding, 0006468 protein phosphorylation; PDB: 3GC7_A 3ZYA_A 3MPT_A 3NEW_A 3MVM_A 1R3C_A 2FST_X 3E93_A 3HV5_B 3OCG_A ....
Probab=99.94  E-value=3.7e-28  Score=191.21  Aligned_cols=164  Identities=29%  Similarity=0.437  Sum_probs=122.1

Q ss_pred             CCCCChHHHHHHHHHHHHHHhhhhcCCCCceEecCCCCCceEECCCCCceEeeecceeecCCCCCCCcccccccccccCC
Q 041793            4 CKILDWPKRFHIICGTARGVMYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDEIEGNTNRVIGTYGYMA   83 (224)
Q Consensus         4 ~~~l~~~~~~~i~~qi~~~l~~Lh~~~~~~i~H~dl~~~nil~~~~~~~kl~df~~~~~~~~~~~~~~~~~~~~~~~y~a   83 (224)
                      .+.+++.+++.++.||+.||.+||+.+   ++|+||+|+||+++.++.++|+|||.+......  ........++..|.|
T Consensus        92 ~~~~~~~~~~~~~~qi~~~L~~Lh~~~---i~H~dikp~NIl~~~~~~~~l~Dfg~~~~~~~~--~~~~~~~~~~~~y~a  166 (260)
T PF00069_consen   92 NKPLSEEEILKIAYQILEALAYLHSKG---IVHRDIKPENILLDENGEVKLIDFGSSVKLSEN--NENFNPFVGTPEYMA  166 (260)
T ss_dssp             HSSBBHHHHHHHHHHHHHHHHHHHHTT---EEESSBSGGGEEESTTSEEEESSGTTTEESTST--TSEBSSSSSSGGGSC
T ss_pred             ccccccccccccccccccccccccccc---ccccccccccccccccccccccccccccccccc--ccccccccccccccc
Confidence            467899999999999999999999999   999999999999999999999999998764211  122233456788999


Q ss_pred             ccccc-CCCcccccceEehhHHHHHHHhcccCCCCcCCCcccccccccCCCccccCccccCCcCHHHHHHHHHHHHHhcc
Q 041793           84 PEYAS-DGKFSVKSDVFSFGILLLEIISGKKNRGFYHSDNKLNLIGHVSMPSQLIDPCIQGSFNLVEVIRCIHIGLLCVQ  162 (224)
Q Consensus        84 PE~~~-~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~  162 (224)
                      ||.+. +..++.++|+||||+++++|++|..||......+............. ..........   ...+.+++.+||+
T Consensus       167 PE~~~~~~~~~~~~Di~slG~il~~l~~~~~p~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~---~~~l~~li~~~l~  242 (260)
T PF00069_consen  167 PEVLQQGKKYTRKSDIWSLGIILYELLTGKLPFEESNSDDQLEIIEKILKRPL-PSSSQQSREK---SEELRDLIKKMLS  242 (260)
T ss_dssp             HHHHTTTSSBSTHHHHHHHHHHHHHHHHSSSSSTTSSHHHHHHHHHHHHHTHH-HHHTTSHTTS---HHHHHHHHHHHSS
T ss_pred             cccccccccccccccccccccccccccccccccccccchhhhhhhhhcccccc-cccccccchh---HHHHHHHHHHHcc
Confidence            99998 77889999999999999999999999865421122221111110000 0000000000   1467889999999


Q ss_pred             CCCCCCCChHHHHH
Q 041793          163 QHPKDRPSMPSVIL  176 (224)
Q Consensus       163 ~dp~~Rps~~~v~~  176 (224)
                      .||++||++.++++
T Consensus       243 ~~p~~R~~~~~l~~  256 (260)
T PF00069_consen  243 KDPEQRPSAEELLK  256 (260)
T ss_dssp             SSGGGSTTHHHHHT
T ss_pred             CChhHCcCHHHHhc
Confidence            99999999999975


No 193
>PHA03210 serine/threonine kinase US3; Provisional
Probab=99.94  E-value=3e-27  Score=202.76  Aligned_cols=166  Identities=21%  Similarity=0.271  Sum_probs=115.4

Q ss_pred             ChHHHHHHHHHHHHHHhhhhcCCCCceEecCCCCCceEECCCCCceEeeecceeecCCCCCCCcccccccccccCCcccc
Q 041793            8 DWPKRFHIICGTARGVMYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDEIEGNTNRVIGTYGYMAPEYA   87 (224)
Q Consensus         8 ~~~~~~~i~~qi~~~l~~Lh~~~~~~i~H~dl~~~nil~~~~~~~kl~df~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~   87 (224)
                      ...++..++.||+.||.|||+.|   |+||||||+||+++.++.+||+|||++..+...... ......|+..|+|||.+
T Consensus       265 ~~~~~~~i~~ql~~aL~yLH~~g---IiHrDLKP~NILl~~~~~vkL~DFGla~~~~~~~~~-~~~~~~gt~~y~aPE~~  340 (501)
T PHA03210        265 LLKQTRAIMKQLLCAVEYIHDKK---LIHRDIKLENIFLNCDGKIVLGDFGTAMPFEKEREA-FDYGWVGTVATNSPEIL  340 (501)
T ss_pred             cHHHHHHHHHHHHHHHHHHHhCC---eecCCCCHHHEEECCCCCEEEEeCCCceecCccccc-ccccccCCcCCCCchhh
Confidence            35667889999999999999999   999999999999999999999999999876432211 12234688999999999


Q ss_pred             cCCCcccccceEehhHHHHHHHhcccC-CCCcCCCccccccc---ccCCC-ccccCcc-----------c-cCCcCHHH-
Q 041793           88 SDGKFSVKSDVFSFGILLLEIISGKKN-RGFYHSDNKLNLIG---HVSMP-SQLIDPC-----------I-QGSFNLVE-  149 (224)
Q Consensus        88 ~~~~~~~~~Di~slG~il~~l~~g~~p-~~~~~~~~~~~~~~---~~~~~-~~~~~~~-----------~-~~~~~~~~-  149 (224)
                      .+..++.++|||||||++|+|++|..+ +..........+..   ..... ...++..           . ........ 
T Consensus       341 ~~~~~~~~~DiwSlGvil~ell~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~i~~~~~~~~~~~~~~~  420 (501)
T PHA03210        341 AGDGYCEITDIWSCGLILLDMLSHDFCPIGDGGGKPGKQLLKIIDSLSVCDEEFPDPPCKLFDYIDSAEIDHAGHSVPPL  420 (501)
T ss_pred             cCCCCCcHHHHHHHHHHHHHHHHCCCCCccCCCCCHHHHHHHHHHhcccChhhcCCcHHHHHHHhhhhhcccCccchhhH
Confidence            998999999999999999999998754 32221111111111   00000 0000000           0 00000000 


Q ss_pred             ------HHHHHHHHHHhccCCCCCCCChHHHHHH
Q 041793          150 ------VIRCIHIGLLCVQQHPKDRPSMPSVILM  177 (224)
Q Consensus       150 ------~~~~~~li~~cl~~dp~~Rps~~~v~~~  177 (224)
                            ...+.+++.+||++||++|||+.|++..
T Consensus       421 ~~~~~~~~~~~~li~kmL~~DP~~Rpsa~elL~h  454 (501)
T PHA03210        421 IRNLGLPADFEYPLVKMLTFDWHLRPGAAELLAL  454 (501)
T ss_pred             HHhcCCChHHHHHHHHHhccCcccCcCHHHHhhC
Confidence                  1234567889999999999999999874


No 194
>cd05112 PTKc_Itk Catalytic domain of the Protein Tyrosine Kinase, Interleukin-2-inducible T-cell Kinase. Protein Tyrosine Kinase (PTK) family; Interleukin-2 (IL-2)-inducible T-cell kinase (Itk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Itk (also known as Tsk or Emt) is a member of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows membrane recruitment and activ
Probab=99.94  E-value=5.4e-27  Score=184.48  Aligned_cols=162  Identities=28%  Similarity=0.403  Sum_probs=121.9

Q ss_pred             CCCCChHHHHHHHHHHHHHHhhhhcCCCCceEecCCCCCceEECCCCCceEeeecceeecCCCCCCCcccccccccccCC
Q 041793            4 CKILDWPKRFHIICGTARGVMYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDEIEGNTNRVIGTYGYMA   83 (224)
Q Consensus         4 ~~~l~~~~~~~i~~qi~~~l~~Lh~~~~~~i~H~dl~~~nil~~~~~~~kl~df~~~~~~~~~~~~~~~~~~~~~~~y~a   83 (224)
                      .+.++++.++.++.|++.||+|||+.+   ++|+||+|+||+++.++.++++|||.+......... .......+..|+|
T Consensus        94 ~~~~~~~~~~~~~~~l~~~l~~lH~~~---i~h~dl~p~ni~i~~~~~~~l~d~g~~~~~~~~~~~-~~~~~~~~~~~~a  169 (256)
T cd05112          94 RGKFSQETLLGMCLDVCEGMAYLESSN---VIHRDLAARNCLVGENQVVKVSDFGMTRFVLDDQYT-SSTGTKFPVKWSS  169 (256)
T ss_pred             ccCCCHHHHHHHHHHHHHHHHHHHHCC---ccccccccceEEEcCCCeEEECCCcceeecccCccc-ccCCCccchhhcC
Confidence            456899999999999999999999999   999999999999999999999999998765432111 1111233568999


Q ss_pred             cccccCCCcccccceEehhHHHHHHHh-cccCCCCcCCCcccccccccCCCccccCccccCCcCHHHHHHHHHHHHHhcc
Q 041793           84 PEYASDGKFSVKSDVFSFGILLLEIIS-GKKNRGFYHSDNKLNLIGHVSMPSQLIDPCIQGSFNLVEVIRCIHIGLLCVQ  162 (224)
Q Consensus        84 PE~~~~~~~~~~~Di~slG~il~~l~~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~  162 (224)
                      ||.+.+..++.++|+||||+++|++++ |..||...............   .....+.   ..    ...+.+|+.+||+
T Consensus       170 Pe~~~~~~~~~~~Dv~slG~~l~el~~~g~~p~~~~~~~~~~~~~~~~---~~~~~~~---~~----~~~~~~l~~~~l~  239 (256)
T cd05112         170 PEVFSFSKYSSKSDVWSFGVLMWEVFSEGKTPYENRSNSEVVETINAG---FRLYKPR---LA----SQSVYELMQHCWK  239 (256)
T ss_pred             HhHhccCCcChHHHHHHHHHHHHHHHcCCCCCCCcCCHHHHHHHHhCC---CCCCCCC---CC----CHHHHHHHHHHcc
Confidence            999988889999999999999999998 88887543322211111111   1111111   11    1357789999999


Q ss_pred             CCCCCCCChHHHHHHhc
Q 041793          163 QHPKDRPSMPSVILMLG  179 (224)
Q Consensus       163 ~dp~~Rps~~~v~~~L~  179 (224)
                      .+|++||++.++++.|+
T Consensus       240 ~~p~~Rp~~~~~l~~l~  256 (256)
T cd05112         240 ERPEDRPSFSLLLHQLA  256 (256)
T ss_pred             cChhhCCCHHHHHHhhC
Confidence            99999999999999874


No 195
>cd06659 STKc_PAK6 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 6. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 6, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK6 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK6 may play a role i
Probab=99.94  E-value=3.8e-27  Score=189.74  Aligned_cols=160  Identities=21%  Similarity=0.316  Sum_probs=121.2

Q ss_pred             CCCChHHHHHHHHHHHHHHhhhhcCCCCceEecCCCCCceEECCCCCceEeeecceeecCCCCCCCcccccccccccCCc
Q 041793            5 KILDWPKRFHIICGTARGVMYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDEIEGNTNRVIGTYGYMAP   84 (224)
Q Consensus         5 ~~l~~~~~~~i~~qi~~~l~~Lh~~~~~~i~H~dl~~~nil~~~~~~~kl~df~~~~~~~~~~~~~~~~~~~~~~~y~aP   84 (224)
                      +.+++.+++.++.|++.||.|||+.+   ++|+||+|+||+++.++.++|+|||++.........  .....++..|+||
T Consensus       112 ~~~~~~~~~~~~~qi~~~L~~LH~~~---ivH~dl~p~Nill~~~~~~kL~dfg~~~~~~~~~~~--~~~~~~~~~y~aP  186 (297)
T cd06659         112 TRLNEEQIATVCESVLQALCYLHSQG---VIHRDIKSDSILLTLDGRVKLSDFGFCAQISKDVPK--RKSLVGTPYWMAP  186 (297)
T ss_pred             cCCCHHHHHHHHHHHHHHHHHHHhCC---eecCCCCHHHeEEccCCcEEEeechhHhhccccccc--ccceecCccccCH
Confidence            56889999999999999999999999   999999999999999999999999998654332211  1224567899999


Q ss_pred             ccccCCCcccccceEehhHHHHHHHhcccCCCCcCCCcccccccccCCCccccCccccCCcCHHHHHHHHHHHHHhccCC
Q 041793           85 EYASDGKFSVKSDVFSFGILLLEIISGKKNRGFYHSDNKLNLIGHVSMPSQLIDPCIQGSFNLVEVIRCIHIGLLCVQQH  164 (224)
Q Consensus        85 E~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~d  164 (224)
                      |.+.+..++.++|+||||+++++|++|+.||...........+.....  ...  ......    ...+.+++.+||+.+
T Consensus       187 E~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~~~~~~~~~~~~~~~~--~~~--~~~~~~----~~~l~~~i~~~l~~~  258 (297)
T cd06659         187 EVISRTPYGTEVDIWSLGIMVIEMVDGEPPYFSDSPVQAMKRLRDSPP--PKL--KNAHKI----SPVLRDFLERMLTRE  258 (297)
T ss_pred             HHHccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHhccCC--CCc--cccCCC----CHHHHHHHHHHhcCC
Confidence            999888889999999999999999999999864332222111111100  000  000011    124667889999999


Q ss_pred             CCCCCChHHHHHH
Q 041793          165 PKDRPSMPSVILM  177 (224)
Q Consensus       165 p~~Rps~~~v~~~  177 (224)
                      |++||+++++++.
T Consensus       259 P~~Rps~~~ll~~  271 (297)
T cd06659         259 PQERATAQELLDH  271 (297)
T ss_pred             cccCcCHHHHhhC
Confidence            9999999999884


No 196
>cd07872 STKc_PCTAIRE2 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-2 kinase. Serine/Threonine Kinases (STKs), PCTAIRE-2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-2 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-2 is specifically expressed in neurons in the central nervous system, mainly in terminally differentiated neurons. It associates with Trap (Tudor repeat associator with PCTAIRE-2) and could play
Probab=99.94  E-value=2.1e-27  Score=192.09  Aligned_cols=166  Identities=24%  Similarity=0.329  Sum_probs=118.7

Q ss_pred             CCCCChHHHHHHHHHHHHHHhhhhcCCCCceEecCCCCCceEECCCCCceEeeecceeecCCCCCCCcccccccccccCC
Q 041793            4 CKILDWPKRFHIICGTARGVMYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDEIEGNTNRVIGTYGYMA   83 (224)
Q Consensus         4 ~~~l~~~~~~~i~~qi~~~l~~Lh~~~~~~i~H~dl~~~nil~~~~~~~kl~df~~~~~~~~~~~~~~~~~~~~~~~y~a   83 (224)
                      ...+++..+..++.||+.||.|||+.|   |+||||+|+||+++.++.++|+|||++........  ......++..|+|
T Consensus        98 ~~~~~~~~~~~~~~qi~~aL~~lH~~~---ivH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~~~--~~~~~~~~~~y~a  172 (309)
T cd07872          98 GNIMSMHNVKIFLYQILRGLAYCHRRK---VLHRDLKPQNLLINERGELKLADFGLARAKSVPTK--TYSNEVVTLWYRP  172 (309)
T ss_pred             CCCCCHHHHHHHHHHHHHHHHHHHHCC---eecCCCCHHHEEECCCCCEEECccccceecCCCcc--ccccccccccccC
Confidence            345889999999999999999999999   99999999999999999999999999876432221  1122356788999


Q ss_pred             cccccC-CCcccccceEehhHHHHHHHhcccCCCCcCCCcccccccc-cC--------------------CCccccCccc
Q 041793           84 PEYASD-GKFSVKSDVFSFGILLLEIISGKKNRGFYHSDNKLNLIGH-VS--------------------MPSQLIDPCI  141 (224)
Q Consensus        84 PE~~~~-~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~-~~--------------------~~~~~~~~~~  141 (224)
                      ||.+.+ ..++.++|+||||+++++|++|+.||......+....+.. ..                    .+........
T Consensus       173 PE~~~~~~~~~~~~DiwslG~il~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  252 (309)
T cd07872         173 PDVLLGSSEYSTQIDMWGVGCIFFEMASGRPLFPGSTVEDELHLIFRLLGTPTEETWPGISSNDEFKNYNFPKYKPQPLI  252 (309)
T ss_pred             CHHHhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCCHHHHhhhcchhhhhhhhcCccCCCchh
Confidence            998865 4578999999999999999999999865433222111100 00                    0000000000


Q ss_pred             cCCcCHHHHHHHHHHHHHhccCCCCCCCChHHHHH
Q 041793          142 QGSFNLVEVIRCIHIGLLCVQQHPKDRPSMPSVIL  176 (224)
Q Consensus       142 ~~~~~~~~~~~~~~li~~cl~~dp~~Rps~~~v~~  176 (224)
                      .....  -...+.+++.+||+.||.+|||+.++++
T Consensus       253 ~~~~~--~~~~~~~li~~~L~~dp~~R~t~~e~l~  285 (309)
T cd07872         253 NHAPR--LDTEGIELLTKFLQYESKKRISAEEAMK  285 (309)
T ss_pred             hhccC--CCHHHHHHHHHhccCChhhCCCHHHHhc
Confidence            00000  0123568999999999999999999976


No 197
>cd05042 PTKc_Aatyk Catalytic domain of the Protein Tyrosine Kinases, Apoptosis-associated tyrosine kinases. Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase (Aatyk) subfamily; catalytic (c) domain. The Aatyk subfamily is also referred to as the lemur tyrosine kinase (Lmtk) subfamily. It consists of Aatyk1 (Lmtk1), Aatyk2 (Lmtk2, Brek), Aatyk3 (Lmtk3), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk proteins are mostly receptor tyr kinases (RTKs) containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk1 does not contain a transmembrane segment and is a cytoplasmic (or nonreceptor) kinase. Aatyk proteins are classified as tyr kina
Probab=99.94  E-value=4.5e-27  Score=186.38  Aligned_cols=164  Identities=23%  Similarity=0.346  Sum_probs=114.0

Q ss_pred             CCChHHHHHHHHHHHHHHhhhhcCCCCceEecCCCCCceEECCCCCceEeeecceeecCCCCCCCcccccccccccCCcc
Q 041793            6 ILDWPKRFHIICGTARGVMYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDEIEGNTNRVIGTYGYMAPE   85 (224)
Q Consensus         6 ~l~~~~~~~i~~qi~~~l~~Lh~~~~~~i~H~dl~~~nil~~~~~~~kl~df~~~~~~~~~~~~~~~~~~~~~~~y~aPE   85 (224)
                      .+++...+.++.||+.||.|||+.+   |+||||||+||+++.++.++++|||++................++..|+|||
T Consensus        96 ~~~~~~~~~~~~qi~~~l~~lH~~~---ivH~dlkp~Nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE  172 (269)
T cd05042          96 MAQKDVLQRMACEVASGLLWLHQAD---FIHSDLALRNCQLTADLSVKIGDYGLALEQYPEDYYITKDCHAVPLRWLAPE  172 (269)
T ss_pred             cccHHHHHHHHHHHHHHHHHHHhcC---EecccccHhheEecCCCcEEEeccccccccccchheeccCCCCCcccccCHH
Confidence            3467788999999999999999999   9999999999999999999999999986532221111112234456799999


Q ss_pred             cccC-------CCcccccceEehhHHHHHHHh-cccCCCCcCCCccccccccc-CCCccccCccccCCcCHHHHHHHHHH
Q 041793           86 YASD-------GKFSVKSDVFSFGILLLEIIS-GKKNRGFYHSDNKLNLIGHV-SMPSQLIDPCIQGSFNLVEVIRCIHI  156 (224)
Q Consensus        86 ~~~~-------~~~~~~~Di~slG~il~~l~~-g~~p~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~l  156 (224)
                      .+..       ..++.++|+||||+++|+|++ |..||......+.  ..... ........+......+    ..+.++
T Consensus       173 ~~~~~~~~~~~~~~~~~~DiwslG~~l~el~~~~~~p~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~----~~~~~~  246 (269)
T cd05042         173 LVEIRGQDLLPKDQTKKSNIWSLGVTMWELFTAADQPYPDLSDEQV--LKQVVREQDIKLPKPQLDLKYS----DRWYEV  246 (269)
T ss_pred             HHhhccccccccccchhhHHHHHHHHHHHHHhCCCCCCCcCCHHHH--HHHHhhccCccCCCCcccccCC----HHHHHH
Confidence            8743       346789999999999999998 6777654322211  11111 1111122222222222    234567


Q ss_pred             HHHhccCCCCCCCChHHHHHHhc
Q 041793          157 GLLCVQQHPKDRPSMPSVILMLG  179 (224)
Q Consensus       157 i~~cl~~dp~~Rps~~~v~~~L~  179 (224)
                      +..|| .||++|||+++|++.|.
T Consensus       247 ~~~~~-~dp~~Rpt~~~v~~~l~  268 (269)
T cd05042         247 MQFCW-LDPETRPTAEEVHELLT  268 (269)
T ss_pred             HHHHh-cCcccccCHHHHHHHhc
Confidence            77888 59999999999999874


No 198
>cd06644 STKc_STK10_LOK Catalytic domain of the Protein Serine/Threonine Kinase, STK10 or Lymphocyte-oriented kinase. Serine/threonine kinases (STKs), STK10 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The STK10 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Other names for STK10 include lymphocyte-oriented kinase (LOK) and Xenopus polo-like kinase kinase 1 (xPlkk1). STK10 is highly expressed in lymphocytes and is responsible in regulating leukocyte function associated antigen (LFA-1)-mediated lymphocyte adhesion. It plays a role in regulating the CD28 responsive element in T cells, and may also function as a regulator of polo-like kinase 1 (Plk1), a protein which is overexpressed in multiple tumor types.
Probab=99.94  E-value=1e-26  Score=186.52  Aligned_cols=160  Identities=29%  Similarity=0.364  Sum_probs=117.7

Q ss_pred             CCCCChHHHHHHHHHHHHHHhhhhcCCCCceEecCCCCCceEECCCCCceEeeecceeecCCCCCCCcccccccccccCC
Q 041793            4 CKILDWPKRFHIICGTARGVMYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDEIEGNTNRVIGTYGYMA   83 (224)
Q Consensus         4 ~~~l~~~~~~~i~~qi~~~l~~Lh~~~~~~i~H~dl~~~nil~~~~~~~kl~df~~~~~~~~~~~~~~~~~~~~~~~y~a   83 (224)
                      .+.+++..++.++.|++.||.|||+.+   ++|+||+|+||+++.++.++|+|||++.......  .......++..|+|
T Consensus       104 ~~~l~~~~~~~~~~ql~~~l~~lH~~~---i~H~dlkp~Nili~~~~~~kl~dfg~~~~~~~~~--~~~~~~~~~~~y~a  178 (292)
T cd06644         104 DRGLTEPQIQVICRQMLEALQYLHSMK---IIHRDLKAGNVLLTLDGDIKLADFGVSAKNVKTL--QRRDSFIGTPYWMA  178 (292)
T ss_pred             cCCCCHHHHHHHHHHHHHHHHHHhcCC---eeecCCCcceEEEcCCCCEEEccCccceeccccc--cccceecCCccccC
Confidence            457899999999999999999999999   9999999999999999999999999887543221  11223456778999


Q ss_pred             ccccc-----CCCcccccceEehhHHHHHHHhcccCCCCcCCCcccccccccCCCccccCccccCCcCHHHHHHHHHHHH
Q 041793           84 PEYAS-----DGKFSVKSDVFSFGILLLEIISGKKNRGFYHSDNKLNLIGHVSMPSQLIDPCIQGSFNLVEVIRCIHIGL  158 (224)
Q Consensus        84 PE~~~-----~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~  158 (224)
                      ||.+.     ...++.++|+||||+++|+|++|..||.................+ ..   .....    ....+.+++.
T Consensus       179 PE~~~~~~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~-~~---~~~~~----~~~~~~~li~  250 (292)
T cd06644         179 PEVVMCETMKDTPYDYKADIWSLGITLIEMAQIEPPHHELNPMRVLLKIAKSEPP-TL---SQPSK----WSMEFRDFLK  250 (292)
T ss_pred             ceeeccccccCCCCCchhhhHhHHHHHHHHhcCCCCCccccHHHHHHHHhcCCCc-cC---CCCcc----cCHHHHHHHH
Confidence            99884     344678999999999999999999998653322111111000000 00   00011    1134678899


Q ss_pred             HhccCCCCCCCChHHHHH
Q 041793          159 LCVQQHPKDRPSMPSVIL  176 (224)
Q Consensus       159 ~cl~~dp~~Rps~~~v~~  176 (224)
                      +||+.||++||+++++++
T Consensus       251 ~~l~~~p~~Rp~~~~il~  268 (292)
T cd06644         251 TALDKHPETRPSAAQLLE  268 (292)
T ss_pred             HHhcCCcccCcCHHHHhc
Confidence            999999999999999965


No 199
>cd05061 PTKc_InsR Catalytic domain of the Protein Tyrosine Kinase, Insulin Receptor. Protein Tyrosine Kinase (PTK) family; Insulin Receptor (InsR); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. InsR is a receptor tyr kinase (RTK) that is composed of two alphabeta heterodimers. Binding of the insulin ligand to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, stimulating downstream kinase activities, which initiate signaling cascades and biological function. InsR signaling plays an important role in many cellular processes including glucose homeostasis, glycogen synthesis, lipid and protein meta
Probab=99.94  E-value=3.4e-27  Score=189.07  Aligned_cols=163  Identities=27%  Similarity=0.439  Sum_probs=121.0

Q ss_pred             CCChHHHHHHHHHHHHHHhhhhcCCCCceEecCCCCCceEECCCCCceEeeecceeecCCCCCCCcccccccccccCCcc
Q 041793            6 ILDWPKRFHIICGTARGVMYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDEIEGNTNRVIGTYGYMAPE   85 (224)
Q Consensus         6 ~l~~~~~~~i~~qi~~~l~~Lh~~~~~~i~H~dl~~~nil~~~~~~~kl~df~~~~~~~~~~~~~~~~~~~~~~~y~aPE   85 (224)
                      .+++..++.++.||+.||.|||+.+   ++|+||||+||+++.++.++|+|||+++...............++..|++||
T Consensus       115 ~~~~~~~~~~~~~l~~~l~~lH~~~---i~H~dikp~nili~~~~~~~L~Dfg~~~~~~~~~~~~~~~~~~~~~~y~~pE  191 (288)
T cd05061         115 PPTLQEMIQMAAEIADGMAYLNAKK---FVHRDLAARNCMVAHDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMAPE  191 (288)
T ss_pred             CCCHHHHHHHHHHHHHHHHHHHhCC---CcCCCCChheEEEcCCCcEEECcCCccccccccccccccCCCcccccccCHH
Confidence            4567788999999999999999999   9999999999999999999999999987653322111112223456799999


Q ss_pred             cccCCCcccccceEehhHHHHHHHh-cccCCCCcCCCcccccccccCCCccccCccccCCcCHHHHHHHHHHHHHhccCC
Q 041793           86 YASDGKFSVKSDVFSFGILLLEIIS-GKKNRGFYHSDNKLNLIGHVSMPSQLIDPCIQGSFNLVEVIRCIHIGLLCVQQH  164 (224)
Q Consensus        86 ~~~~~~~~~~~Di~slG~il~~l~~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~d  164 (224)
                      .+.+..++.++|+|||||+++++++ |..||..........   ..... .....  ....    ...+.+++.+||+.|
T Consensus       192 ~~~~~~~~~~~DvwslG~~l~el~~~~~~p~~~~~~~~~~~---~~~~~-~~~~~--~~~~----~~~~~~li~~~l~~~  261 (288)
T cd05061         192 SLKDGVFTTSSDMWSFGVVLWEITSLAEQPYQGLSNEQVLK---FVMDG-GYLDQ--PDNC----PERVTDLMRMCWQFN  261 (288)
T ss_pred             HhccCCCChHhHHHHHHHHHHHHHhCCCCCCCCCCHHHHHH---HHHcC-CCCCC--CCCC----CHHHHHHHHHHcCCC
Confidence            9988889999999999999999998 677875432221111   11100 00000  0111    135778999999999


Q ss_pred             CCCCCChHHHHHHhccC
Q 041793          165 PKDRPSMPSVILMLGSE  181 (224)
Q Consensus       165 p~~Rps~~~v~~~L~~~  181 (224)
                      |++|||+.++++.|+..
T Consensus       262 p~~Rps~~~ll~~l~~~  278 (288)
T cd05061         262 PKMRPTFLEIVNLLKDD  278 (288)
T ss_pred             hhHCcCHHHHHHHHHhh
Confidence            99999999999999775


No 200
>cd05078 PTK_Jak2_Jak3_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinases, Janus kinases 2 and 3. Protein Tyrosine Kinase (PTK) family; Janus kinase 2 (Jak2) and Jak3; pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak2 and Jak3 are members of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity 
Probab=99.94  E-value=5.3e-27  Score=185.03  Aligned_cols=155  Identities=24%  Similarity=0.338  Sum_probs=115.2

Q ss_pred             CCCCChHHHHHHHHHHHHHHhhhhcCCCCceEecCCCCCceEECCCCC--------ceEeeecceeecCCCCCCCccccc
Q 041793            4 CKILDWPKRFHIICGTARGVMYLHQDSRLRIIHRDLKASNVLLDQDMN--------PKISDFGLARAFGGDEIEGNTNRV   75 (224)
Q Consensus         4 ~~~l~~~~~~~i~~qi~~~l~~Lh~~~~~~i~H~dl~~~nil~~~~~~--------~kl~df~~~~~~~~~~~~~~~~~~   75 (224)
                      ...+++..++.++.||+.||+|||+.+   |+|+||||+||+++.++.        ++++|||++......      ...
T Consensus        94 ~~~~~~~~~~~~~~qi~~~l~~lH~~~---iiH~dlkp~nili~~~~~~~~~~~~~~~l~d~g~~~~~~~~------~~~  164 (258)
T cd05078          94 KNLINISWKLEVAKQLAWALHFLEDKG---LTHGNVCAKNVLLIREEDRKTGNPPFIKLSDPGISITVLPK------EIL  164 (258)
T ss_pred             CCCCCHHHHHHHHHHHHHHHHHHHHCC---eecCCCccceEEEecccccccCCCceEEecccccccccCCc------hhc
Confidence            346899999999999999999999999   999999999999987665        589999987654321      123


Q ss_pred             ccccccCCcccccCC-CcccccceEehhHHHHHHHhcc-cCCCCcCCCcccccccccCCCccccCccccCCcCHHHHHHH
Q 041793           76 IGTYGYMAPEYASDG-KFSVKSDVFSFGILLLEIISGK-KNRGFYHSDNKLNLIGHVSMPSQLIDPCIQGSFNLVEVIRC  153 (224)
Q Consensus        76 ~~~~~y~aPE~~~~~-~~~~~~Di~slG~il~~l~~g~-~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  153 (224)
                      .++..|+|||.+.+. .++.++|+||||+++|++++|. .||.............   .....     +...    ...+
T Consensus       165 ~~~~~y~aPE~~~~~~~~~~~~DiwslG~~l~~l~~g~~~~~~~~~~~~~~~~~~---~~~~~-----~~~~----~~~~  232 (258)
T cd05078         165 LERIPWVPPECIENPQNLSLAADKWSFGTTLWEIFSGGDKPLSALDSQKKLQFYE---DRHQL-----PAPK----WTEL  232 (258)
T ss_pred             cccCCccCchhccCCCCCCchhhHHHHHHHHHHHHcCCCCChhhccHHHHHHHHH---ccccC-----CCCC----cHHH
Confidence            467789999998764 4789999999999999999985 5544322221111111   01111     1111    1346


Q ss_pred             HHHHHHhccCCCCCCCChHHHHHHhc
Q 041793          154 IHIGLLCVQQHPKDRPSMPSVILMLG  179 (224)
Q Consensus       154 ~~li~~cl~~dp~~Rps~~~v~~~L~  179 (224)
                      .+++.+||+.||++|||++++++.|+
T Consensus       233 ~~li~~~l~~~p~~Rps~~~il~~l~  258 (258)
T cd05078         233 ANLINQCMDYEPDFRPSFRAIIRDLN  258 (258)
T ss_pred             HHHHHHHhccChhhCCCHHHHHHhcC
Confidence            78999999999999999999999874


No 201
>cd05034 PTKc_Src_like Catalytic domain of Src kinase-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Src kinase subfamily; catalytic (c) domain. Src subfamily members include Src, Lck, Hck, Blk, Lyn, Fgr, Fyn, Yrk, and Yes. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src (or c-Src) proteins are cytoplasmic (or non-receptor) tyr kinases which are anchored to the plasma membrane. They contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-t
Probab=99.94  E-value=4.5e-27  Score=185.45  Aligned_cols=162  Identities=31%  Similarity=0.485  Sum_probs=122.1

Q ss_pred             CCCChHHHHHHHHHHHHHHhhhhcCCCCceEecCCCCCceEECCCCCceEeeecceeecCCCCCCCcccccccccccCCc
Q 041793            5 KILDWPKRFHIICGTARGVMYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDEIEGNTNRVIGTYGYMAP   84 (224)
Q Consensus         5 ~~l~~~~~~~i~~qi~~~l~~Lh~~~~~~i~H~dl~~~nil~~~~~~~kl~df~~~~~~~~~~~~~~~~~~~~~~~y~aP   84 (224)
                      ..+++.+++.++.||+.||.|||+++   ++|+||+|+||+++.++.++++|||++.......... ......+..|++|
T Consensus        98 ~~~~~~~~~~~~~~i~~al~~lh~~~---i~h~di~p~nili~~~~~~~l~d~g~~~~~~~~~~~~-~~~~~~~~~y~~P  173 (261)
T cd05034          98 KKLRLPQLVDMAAQIAEGMAYLESRN---YIHRDLAARNILVGENLVCKIADFGLARLIEDDEYTA-REGAKFPIKWTAP  173 (261)
T ss_pred             CCCCHHHHHHHHHHHHHHHHHHHhCC---cccCCcchheEEEcCCCCEEECccccceeccchhhhh-hhccCCCccccCH
Confidence            46899999999999999999999999   9999999999999999999999999988764321111 1112234579999


Q ss_pred             ccccCCCcccccceEehhHHHHHHHh-cccCCCCcCCCcccccccccCCCccccCccccCCcCHHHHHHHHHHHHHhccC
Q 041793           85 EYASDGKFSVKSDVFSFGILLLEIIS-GKKNRGFYHSDNKLNLIGHVSMPSQLIDPCIQGSFNLVEVIRCIHIGLLCVQQ  163 (224)
Q Consensus        85 E~~~~~~~~~~~Di~slG~il~~l~~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~  163 (224)
                      |.+.+..++.++|+||||++++++++ |+.||...........+   ........   ....    ...+.+++.+||+.
T Consensus       174 E~~~~~~~~~~~Di~slG~il~~l~t~g~~p~~~~~~~~~~~~~---~~~~~~~~---~~~~----~~~~~~~i~~~l~~  243 (261)
T cd05034         174 EAANYGRFTIKSDVWSFGILLTEIVTYGRVPYPGMTNREVLEQV---ERGYRMPR---PPNC----PEELYDLMLQCWDK  243 (261)
T ss_pred             HHhccCCcCchhHHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHH---HcCCCCCC---CCCC----CHHHHHHHHHHccc
Confidence            99988888999999999999999998 88887543322111111   11001000   1111    13467889999999


Q ss_pred             CCCCCCChHHHHHHhcc
Q 041793          164 HPKDRPSMPSVILMLGS  180 (224)
Q Consensus       164 dp~~Rps~~~v~~~L~~  180 (224)
                      +|++||+++++.+.|+.
T Consensus       244 ~p~~Rp~~~~l~~~l~~  260 (261)
T cd05034         244 DPEERPTFEYLQSFLED  260 (261)
T ss_pred             CcccCCCHHHHHHHHhc
Confidence            99999999999998864


No 202
>cd05083 PTKc_Chk Catalytic domain of the Protein Tyrosine Kinase, Csk homologous kinase. Protein Tyrosine Kinase (PTK) family; Csk homologous kinase (Chk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. Chk is also referred to as megakaryocyte-associated tyrosine kinase (Matk). To inhibit Src kinases, Chk is translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Chk inhibit Src ki
Probab=99.94  E-value=8.8e-27  Score=183.24  Aligned_cols=158  Identities=28%  Similarity=0.378  Sum_probs=121.1

Q ss_pred             CCCChHHHHHHHHHHHHHHhhhhcCCCCceEecCCCCCceEECCCCCceEeeecceeecCCCCCCCcccccccccccCCc
Q 041793            5 KILDWPKRFHIICGTARGVMYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDEIEGNTNRVIGTYGYMAP   84 (224)
Q Consensus         5 ~~l~~~~~~~i~~qi~~~l~~Lh~~~~~~i~H~dl~~~nil~~~~~~~kl~df~~~~~~~~~~~~~~~~~~~~~~~y~aP   84 (224)
                      ..+++.+++.++.|++.||.|||+.|   ++||||+|+||+++.++.++|+|||++.......     .....+..|+||
T Consensus        95 ~~~~~~~~~~~~~qi~~al~~lH~~~---~~H~dl~p~nili~~~~~~kl~Dfg~~~~~~~~~-----~~~~~~~~y~~p  166 (254)
T cd05083          95 ALVSVIQLLQFSLDVAEGMEYLESKK---LVHRDLAARNILVSEDGVAKVSDFGLARVGSMGV-----DNSKLPVKWTAP  166 (254)
T ss_pred             CCCCHHHHHHHHHHHHHHHHHHHhCC---eeccccCcceEEEcCCCcEEECCCccceeccccC-----CCCCCCceecCH
Confidence            45889999999999999999999999   9999999999999999999999999987643211     112334579999


Q ss_pred             ccccCCCcccccceEehhHHHHHHHh-cccCCCCcCCCcccccccccCCCccccCccccCCcCHHHHHHHHHHHHHhccC
Q 041793           85 EYASDGKFSVKSDVFSFGILLLEIIS-GKKNRGFYHSDNKLNLIGHVSMPSQLIDPCIQGSFNLVEVIRCIHIGLLCVQQ  163 (224)
Q Consensus        85 E~~~~~~~~~~~Di~slG~il~~l~~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~  163 (224)
                      |.+.+..++.++|+||||+++++|++ |..||................    ..+  .....    ...+.+++.+||+.
T Consensus       167 e~~~~~~~~~~~Dv~slG~~l~el~~~g~~p~~~~~~~~~~~~~~~~~----~~~--~~~~~----~~~~~~li~~~l~~  236 (254)
T cd05083         167 EALKHKKFSSKSDVWSYGVLLWEVFSYGRAPYPKMSLKEVKECVEKGY----RME--PPEGC----PADVYVLMTSCWET  236 (254)
T ss_pred             HHhccCCcCchhhHHHHHHHHHHHHhCCCCCCccCCHHHHHHHHhCCC----CCC--CCCcC----CHHHHHHHHHHcCC
Confidence            99988889999999999999999997 888875443322221111110    011  01111    13466889999999


Q ss_pred             CCCCCCChHHHHHHhcc
Q 041793          164 HPKDRPSMPSVILMLGS  180 (224)
Q Consensus       164 dp~~Rps~~~v~~~L~~  180 (224)
                      +|++||++.++++.|+.
T Consensus       237 ~p~~Rp~~~~l~~~l~~  253 (254)
T cd05083         237 EPKKRPSFHKLREKLEK  253 (254)
T ss_pred             ChhhCcCHHHHHHHHcc
Confidence            99999999999998864


No 203
>cd05056 PTKc_FAK Catalytic domain of the Protein Tyrosine Kinase, Focal Adhesion Kinase. Protein Tyrosine Kinase (PTK) family; Focal Adhesion Kinase (FAK); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FAK is a cytoplasmic (or nonreceptor) tyr kinase that contains an autophosphorylation site and a FERM domain at the N-terminus, a central tyr kinase domain, proline-rich regions, and a C-terminal FAT (focal adhesion targeting) domain. FAK activity is dependent on integrin-mediated cell adhesion, which facilitates N-terminal autophosphorylation. Full activation is achieved by the phosphorylation of its two adjacent A-loop tyrosines. FAK is important in mediating signaling initiated at sites of cell adhesions
Probab=99.94  E-value=7.4e-27  Score=185.24  Aligned_cols=163  Identities=23%  Similarity=0.312  Sum_probs=123.4

Q ss_pred             CCCChHHHHHHHHHHHHHHhhhhcCCCCceEecCCCCCceEECCCCCceEeeecceeecCCCCCCCcccccccccccCCc
Q 041793            5 KILDWPKRFHIICGTARGVMYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDEIEGNTNRVIGTYGYMAP   84 (224)
Q Consensus         5 ~~l~~~~~~~i~~qi~~~l~~Lh~~~~~~i~H~dl~~~nil~~~~~~~kl~df~~~~~~~~~~~~~~~~~~~~~~~y~aP   84 (224)
                      ..+++.+++.++.|++.||.|||+.+   ++|+||+|+||+++.++.++++|||++.......... .....++..|+||
T Consensus       102 ~~~~~~~~~~~~~~l~~~l~~lH~~~---~~H~dl~p~nili~~~~~~~l~d~g~~~~~~~~~~~~-~~~~~~~~~y~aP  177 (270)
T cd05056         102 YSLDLASLILYSYQLSTALAYLESKR---FVHRDIAARNVLVSSPDCVKLGDFGLSRYLEDESYYK-ASKGKLPIKWMAP  177 (270)
T ss_pred             CCCCHHHHHHHHHHHHHHHHHHHhCC---eeccccChheEEEecCCCeEEccCceeeeccccccee-cCCCCccccccCh
Confidence            46899999999999999999999999   9999999999999999999999999988654332111 1112234579999


Q ss_pred             ccccCCCcccccceEehhHHHHHHHh-cccCCCCcCCCcccccccccCCCccccCccccCCcCHHHHHHHHHHHHHhccC
Q 041793           85 EYASDGKFSVKSDVFSFGILLLEIIS-GKKNRGFYHSDNKLNLIGHVSMPSQLIDPCIQGSFNLVEVIRCIHIGLLCVQQ  163 (224)
Q Consensus        85 E~~~~~~~~~~~Di~slG~il~~l~~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~  163 (224)
                      |.+.+..++.++|+||||++++++++ |..||...........+..   ......   ....+    ..+.+++.+||..
T Consensus       178 E~~~~~~~~~~~Di~slG~il~el~~~g~~pf~~~~~~~~~~~~~~---~~~~~~---~~~~~----~~~~~li~~~l~~  247 (270)
T cd05056         178 ESINFRRFTSASDVWMFGVCMWEILMLGVKPFQGVKNNDVIGRIEN---GERLPM---PPNCP----PTLYSLMTKCWAY  247 (270)
T ss_pred             hhhccCCCCchhhhHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHc---CCcCCC---CCCCC----HHHHHHHHHHcCC
Confidence            99888888999999999999999886 9999865433222111111   111111   11111    2467788999999


Q ss_pred             CCCCCCChHHHHHHhccC
Q 041793          164 HPKDRPSMPSVILMLGSE  181 (224)
Q Consensus       164 dp~~Rps~~~v~~~L~~~  181 (224)
                      +|++|||+.++++.|+..
T Consensus       248 ~P~~Rpt~~~~~~~l~~~  265 (270)
T cd05056         248 DPSKRPRFTELKAQLSDI  265 (270)
T ss_pred             ChhhCcCHHHHHHHHHHH
Confidence            999999999999998764


No 204
>cd05605 STKc_GRK4_like Catalytic domain of G protein-coupled Receptor Kinase 4-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK4-like group, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. Members of the GRK4-like group include GRK4, GRK5, 
Probab=99.94  E-value=4e-27  Score=188.47  Aligned_cols=160  Identities=26%  Similarity=0.323  Sum_probs=121.1

Q ss_pred             CCCCChHHHHHHHHHHHHHHhhhhcCCCCceEecCCCCCceEECCCCCceEeeecceeecCCCCCCCcccccccccccCC
Q 041793            4 CKILDWPKRFHIICGTARGVMYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDEIEGNTNRVIGTYGYMA   83 (224)
Q Consensus         4 ~~~l~~~~~~~i~~qi~~~l~~Lh~~~~~~i~H~dl~~~nil~~~~~~~kl~df~~~~~~~~~~~~~~~~~~~~~~~y~a   83 (224)
                      ...+++..+..++.|++.||.|||+.|   ++|+||+|+||+++.++.++++|||++.......   ......++..|+|
T Consensus        96 ~~~~~~~~~~~~~~qi~~~l~~lH~~~---ivH~dlkp~Nil~~~~~~~~l~Dfg~~~~~~~~~---~~~~~~~~~~y~a  169 (285)
T cd05605          96 NPGFDEERAVFYAAEITCGLEDLHRER---IVYRDLKPENILLDDYGHIRISDLGLAVEIPEGE---TIRGRVGTVGYMA  169 (285)
T ss_pred             cCCCCHHHHHHHHHHHHHHHHHHHHCC---cEecCCCHHHEEECCCCCEEEeeCCCceecCCCC---ccccccCCCCccC
Confidence            356899999999999999999999999   9999999999999999999999999987653221   1122457889999


Q ss_pred             cccccCCCcccccceEehhHHHHHHHhcccCCCCcCCCcccccc-cccCCCccccCccccCCcCHHHHHHHHHHHHHhcc
Q 041793           84 PEYASDGKFSVKSDVFSFGILLLEIISGKKNRGFYHSDNKLNLI-GHVSMPSQLIDPCIQGSFNLVEVIRCIHIGLLCVQ  162 (224)
Q Consensus        84 PE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~  162 (224)
                      ||.+.+..++.++|+||+|+++|++++|..||...........+ ..+.....        .........+.+|+.+||+
T Consensus       170 PE~~~~~~~~~~~Diws~G~~l~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~~~li~~~l~  241 (285)
T cd05605         170 PEVVKNERYTFSPDWWGLGCLIYEMIEGKSPFRQRKEKVKREEVERRVKEDQE--------EYSEKFSEAARSICRQLLT  241 (285)
T ss_pred             cHHhcCCCCCccccchhHHHHHHHHHHCCCCCCCCchhhHHHHHHHHhhhccc--------ccCcccCHHHHHHHHHHcc
Confidence            99998888999999999999999999999998654322111111 11110000        0111112346789999999


Q ss_pred             CCCCCCC-----ChHHHHHH
Q 041793          163 QHPKDRP-----SMPSVILM  177 (224)
Q Consensus       163 ~dp~~Rp-----s~~~v~~~  177 (224)
                      .||++||     +++++++.
T Consensus       242 ~~P~~R~~~~~~~~~~l~~~  261 (285)
T cd05605         242 KDPGFRLGCRGEGAEEVKAH  261 (285)
T ss_pred             CCHHHhcCCCCCCHHHHhcC
Confidence            9999999     78888553


No 205
>cd05107 PTKc_PDGFR_beta Catalytic domain of the Protein Tyrosine Kinase, Platelet Derived Growth Factor Receptor beta. Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) beta; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR beta is a receptor tyr kinase (RTK) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding to its ligands, the PDGFs, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. PDGFR beta forms homodimers or heterodimers with PDGFR alpha, depending on the nature of the PDGF ligand. PDGF-BB and PDGF-D
Probab=99.94  E-value=5.8e-27  Score=195.64  Aligned_cols=166  Identities=25%  Similarity=0.342  Sum_probs=123.9

Q ss_pred             CCCCChHHHHHHHHHHHHHHhhhhcCCCCceEecCCCCCceEECCCCCceEeeecceeecCCCCCCCcccccccccccCC
Q 041793            4 CKILDWPKRFHIICGTARGVMYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDEIEGNTNRVIGTYGYMA   83 (224)
Q Consensus         4 ~~~l~~~~~~~i~~qi~~~l~~Lh~~~~~~i~H~dl~~~nil~~~~~~~kl~df~~~~~~~~~~~~~~~~~~~~~~~y~a   83 (224)
                      ...|++.+++.++.||+.||.|||+.+   ++|+||||.||+++.++.++++|||++................++..|++
T Consensus       233 ~~~l~~~~~~~~~~qi~~aL~~LH~~~---ivHrdlkp~NiLl~~~~~~kL~DfGla~~~~~~~~~~~~~~~~~~~~y~a  309 (401)
T cd05107         233 SPALSYMDLVGFSYQVANGMEFLASKN---CVHRDLAARNVLICEGKLVKICDFGLARDIMRDSNYISKGSTFLPLKWMA  309 (401)
T ss_pred             CCCCCHHHHHHHHHHHHHHHHHHhcCC---cCcccCCcceEEEeCCCEEEEEecCcceecccccccccCCCcCCCCceeC
Confidence            356889999999999999999999999   99999999999999999999999999986532221111122345678999


Q ss_pred             cccccCCCcccccceEehhHHHHHHHh-cccCCCCcCCCcccccccccCCCccccCccccCCcCHHHHHHHHHHHHHhcc
Q 041793           84 PEYASDGKFSVKSDVFSFGILLLEIIS-GKKNRGFYHSDNKLNLIGHVSMPSQLIDPCIQGSFNLVEVIRCIHIGLLCVQ  162 (224)
Q Consensus        84 PE~~~~~~~~~~~Di~slG~il~~l~~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~  162 (224)
                      ||.+.+..++.++|+||||++++++++ |..||........  .............   +...    ...+.+|+.+||+
T Consensus       310 PE~~~~~~~~~~~DvwslGvil~e~l~~g~~P~~~~~~~~~--~~~~~~~~~~~~~---p~~~----~~~l~~li~~cl~  380 (401)
T cd05107         310 PESIFNNLYTTLSDVWSFGILLWEIFTLGGTPYPELPMNEQ--FYNAIKRGYRMAK---PAHA----SDEIYEIMQKCWE  380 (401)
T ss_pred             hHHhcCCCCCcHhHHHHHHHHHHHHHHcCCCCCCCCCchHH--HHHHHHcCCCCCC---CCCC----CHHHHHHHHHHcC
Confidence            999988888999999999999999998 8888754332211  1110000000000   1111    1346788899999


Q ss_pred             CCCCCCCChHHHHHHhccC
Q 041793          163 QHPKDRPSMPSVILMLGSE  181 (224)
Q Consensus       163 ~dp~~Rps~~~v~~~L~~~  181 (224)
                      .+|++||++++|++.|+..
T Consensus       381 ~~P~~RPs~~ell~~L~~~  399 (401)
T cd05107         381 EKFEIRPDFSQLVHLVGDL  399 (401)
T ss_pred             CChhHCcCHHHHHHHHHHH
Confidence            9999999999999999765


No 206
>cd06646 STKc_MAP4K5 Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-activated protein kinase kinase kinase kinase 5. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 5 (MAPKKKK5 or MAP4K5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated 
Probab=99.94  E-value=6e-27  Score=185.39  Aligned_cols=164  Identities=24%  Similarity=0.367  Sum_probs=119.9

Q ss_pred             CCCCChHHHHHHHHHHHHHHhhhhcCCCCceEecCCCCCceEECCCCCceEeeecceeecCCCCCCCcccccccccccCC
Q 041793            4 CKILDWPKRFHIICGTARGVMYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDEIEGNTNRVIGTYGYMA   83 (224)
Q Consensus         4 ~~~l~~~~~~~i~~qi~~~l~~Lh~~~~~~i~H~dl~~~nil~~~~~~~kl~df~~~~~~~~~~~~~~~~~~~~~~~y~a   83 (224)
                      .+.+++.++..++.|++.||.|||+.+   |+|+||+|.||+++.++.++++|||++.........  .....++..|+|
T Consensus       100 ~~~~~~~~~~~~~~qi~~~l~~lH~~~---i~H~dl~p~nill~~~~~~~l~dfg~~~~~~~~~~~--~~~~~~~~~y~~  174 (267)
T cd06646         100 TGPLSELQIAYVCRETLQGLAYLHSKG---KMHRDIKGANILLTDNGDVKLADFGVAAKITATIAK--RKSFIGTPYWMA  174 (267)
T ss_pred             cCCCCHHHHHHHHHHHHHHHHHHHHCC---ccccCCCHHHEEECCCCCEEECcCccceeecccccc--cCccccCccccC
Confidence            457899999999999999999999999   999999999999999999999999999865432111  122356778999


Q ss_pred             ccccc---CCCcccccceEehhHHHHHHHhcccCCCCcCCCcccccccccCCCccccCccccCCcCHHHHHHHHHHHHHh
Q 041793           84 PEYAS---DGKFSVKSDVFSFGILLLEIISGKKNRGFYHSDNKLNLIGHVSMPSQLIDPCIQGSFNLVEVIRCIHIGLLC  160 (224)
Q Consensus        84 PE~~~---~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~c  160 (224)
                      ||.+.   ...++.++|+||||+++++|++|+.||...........+......    .+.......  ....+.+++.+|
T Consensus       175 PE~~~~~~~~~~~~~~Dvws~G~il~el~~g~~p~~~~~~~~~~~~~~~~~~~----~~~~~~~~~--~~~~~~~li~~~  248 (267)
T cd06646         175 PEVAAVEKNGGYNQLCDIWAVGITAIELAELQPPMFDLHPMRALFLMSKSNFQ----PPKLKDKTK--WSSTFHNFVKIS  248 (267)
T ss_pred             HhHcccccCCCCcchhhHHHHHHHHHHHHhCCCCccccchhhhheeeecCCCC----CCCCccccc--cCHHHHHHHHHH
Confidence            99874   344678999999999999999999997543322111111111111    111111011  113567899999


Q ss_pred             ccCCCCCCCChHHHHHHh
Q 041793          161 VQQHPKDRPSMPSVILML  178 (224)
Q Consensus       161 l~~dp~~Rps~~~v~~~L  178 (224)
                      |+.+|++||++++|++.|
T Consensus       249 l~~~P~~Rp~~~~il~~l  266 (267)
T cd06646         249 LTKNPKKRPTAERLLTHL  266 (267)
T ss_pred             hhCChhhCcCHHHHhcCC
Confidence            999999999999998653


No 207
>cd05615 STKc_cPKC_alpha Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C alpha. Serine/Threonine Kinases (STKs), Classical Protein Kinase C (cPKC) subfamily, alpha isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. There are four cPKC isoforms, named alpha, betaI, betaII, a
Probab=99.94  E-value=4.9e-27  Score=191.23  Aligned_cols=152  Identities=26%  Similarity=0.409  Sum_probs=116.6

Q ss_pred             CCCCChHHHHHHHHHHHHHHhhhhcCCCCceEecCCCCCceEECCCCCceEeeecceeecCCCCCCCcccccccccccCC
Q 041793            4 CKILDWPKRFHIICGTARGVMYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDEIEGNTNRVIGTYGYMA   83 (224)
Q Consensus         4 ~~~l~~~~~~~i~~qi~~~l~~Lh~~~~~~i~H~dl~~~nil~~~~~~~kl~df~~~~~~~~~~~~~~~~~~~~~~~y~a   83 (224)
                      .+.+++.+++.++.||+.||.|||+.|   |+||||||+||+++.++.++|+|||++........  ......|+..|+|
T Consensus        95 ~~~l~~~~~~~i~~qi~~al~~lH~~~---ivHrDikp~Nill~~~~~ikL~Dfg~~~~~~~~~~--~~~~~~gt~~y~a  169 (323)
T cd05615          95 VGKFKEPQAVFYAAEISVGLFFLHRRG---IIYRDLKLDNVMLDSEGHIKIADFGMCKEHMVDGV--TTRTFCGTPDYIA  169 (323)
T ss_pred             cCCCCHHHHHHHHHHHHHHHHHHHHCC---eeccCCCHHHeEECCCCCEEEeccccccccCCCCc--cccCccCCccccC
Confidence            457899999999999999999999999   99999999999999999999999999875422211  1223457889999


Q ss_pred             cccccCCCcccccceEehhHHHHHHHhcccCCCCcCCCcccccccccCCCccccCccccCCcCHHHHHHHHHHHHHhccC
Q 041793           84 PEYASDGKFSVKSDVFSFGILLLEIISGKKNRGFYHSDNKLNLIGHVSMPSQLIDPCIQGSFNLVEVIRCIHIGLLCVQQ  163 (224)
Q Consensus        84 PE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~  163 (224)
                      ||.+.+..++.++|+||||+++|+|++|..||...........+....  ...     +...+    ..+.+++.+||+.
T Consensus       170 PE~~~~~~~~~~~DiwslGvil~elltG~~pf~~~~~~~~~~~i~~~~--~~~-----p~~~~----~~~~~li~~~l~~  238 (323)
T cd05615         170 PEIIAYQPYGKSVDWWAYGVLLYEMLAGQPPFDGEDEDELFQSIMEHN--VSY-----PKSLS----KEAVSICKGLMTK  238 (323)
T ss_pred             HHHHcCCCCCCccchhhhHHHHHHHHhCCCCCCCCCHHHHHHHHHhCC--CCC-----CccCC----HHHHHHHHHHccc
Confidence            999988889999999999999999999999986543222111111100  000     11111    2467788999999


Q ss_pred             CCCCCCCh
Q 041793          164 HPKDRPSM  171 (224)
Q Consensus       164 dp~~Rps~  171 (224)
                      +|.+|++.
T Consensus       239 ~p~~R~~~  246 (323)
T cd05615         239 HPSKRLGC  246 (323)
T ss_pred             CHhhCCCC
Confidence            99999985


No 208
>cd05081 PTKc_Jak2_Jak3_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases 2 and 3. Protein Tyrosine Kinase (PTK) family; Janus kinase 2 (Jak2) and Jak3; catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak2 and Jak3 are members of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal catalytic tyr kinase domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as th
Probab=99.94  E-value=3e-27  Score=188.77  Aligned_cols=172  Identities=25%  Similarity=0.365  Sum_probs=120.5

Q ss_pred             CCCCChHHHHHHHHHHHHHHhhhhcCCCCceEecCCCCCceEECCCCCceEeeecceeecCCCCCCC-cccccccccccC
Q 041793            4 CKILDWPKRFHIICGTARGVMYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDEIEG-NTNRVIGTYGYM   82 (224)
Q Consensus         4 ~~~l~~~~~~~i~~qi~~~l~~Lh~~~~~~i~H~dl~~~nil~~~~~~~kl~df~~~~~~~~~~~~~-~~~~~~~~~~y~   82 (224)
                      ...+++.+++.++.|++.||.|||+.|   ++|+||+|+||+++.++.++|+|||++.......... ......++..|+
T Consensus       102 ~~~l~~~~~~~~~~~l~~aL~~LH~~~---i~H~dlkp~nili~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~y~  178 (284)
T cd05081         102 RERLDHRKLLLYASQICKGMEYLGSKR---YVHRDLATRNILVESENRVKIGDFGLTKVLPQDKEYYKVREPGESPIFWY  178 (284)
T ss_pred             CcCCCHHHHHHHHHHHHHHHHHHHHCC---ceeccCCHhhEEECCCCeEEECCCcccccccCCCcceeecCCCCCceEee
Confidence            346899999999999999999999999   9999999999999999999999999998754322111 011122344689


Q ss_pred             CcccccCCCcccccceEehhHHHHHHHhcccCCCCcCCCcccccccccCCCc-------cccC--ccccCCcCHHHHHHH
Q 041793           83 APEYASDGKFSVKSDVFSFGILLLEIISGKKNRGFYHSDNKLNLIGHVSMPS-------QLID--PCIQGSFNLVEVIRC  153 (224)
Q Consensus        83 aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~-------~~~~--~~~~~~~~~~~~~~~  153 (224)
                      |||.+.+..++.++|+||||+++++|++|..++...... ....+.......       ....  .......+  ....+
T Consensus       179 aPE~~~~~~~~~~~Di~slG~~l~el~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~  255 (284)
T cd05081         179 APESLTESKFSVASDVWSFGVVLYELFTYSDKSCSPPAE-FMRMMGNDKQGQMIVYHLIELLKNNGRLPAPPG--CPAEI  255 (284)
T ss_pred             CHHHhccCCcChHHHHHHHHHHHHHHhhcCCcCCCcchh-hhhhcccccccccchHHHHHHHhcCCcCCCCCC--CCHHH
Confidence            999998888899999999999999999987664322110 000000000000       0000  00000001  11347


Q ss_pred             HHHHHHhccCCCCCCCChHHHHHHhccC
Q 041793          154 IHIGLLCVQQHPKDRPSMPSVILMLGSE  181 (224)
Q Consensus       154 ~~li~~cl~~dp~~Rps~~~v~~~L~~~  181 (224)
                      .+|+.+||..+|++|||+.+|++.|+..
T Consensus       256 ~~li~~cl~~~p~~Rpt~~ei~~~l~~~  283 (284)
T cd05081         256 YAIMKECWNNDPSQRPSFSELALQVEAI  283 (284)
T ss_pred             HHHHHHHccCChhhCCCHHHHHHHHHhc
Confidence            7899999999999999999999998753


No 209
>cd07865 STKc_CDK9 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 9. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 9 (CDK9) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK9 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK9 together with a cyclin partner (cyclin T1, T2a, T2b, or K) is the main component of distinct positive transcription elongation factors (P-TEFb), which function as Ser2 C-terminal domain kinases of RNA polymerase II. P-TEFb participates in multipl
Probab=99.94  E-value=6.6e-27  Score=188.79  Aligned_cols=170  Identities=21%  Similarity=0.287  Sum_probs=119.0

Q ss_pred             CCCCChHHHHHHHHHHHHHHhhhhcCCCCceEecCCCCCceEECCCCCceEeeecceeecCCCCCC--Cccccccccccc
Q 041793            4 CKILDWPKRFHIICGTARGVMYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDEIE--GNTNRVIGTYGY   81 (224)
Q Consensus         4 ~~~l~~~~~~~i~~qi~~~l~~Lh~~~~~~i~H~dl~~~nil~~~~~~~kl~df~~~~~~~~~~~~--~~~~~~~~~~~y   81 (224)
                      ...+++.+++.++.||+.||.|||+.|   ++|+||+|+||+++.++.++|+|||++.........  .......++..|
T Consensus       113 ~~~~~~~~~~~i~~qi~~al~~lH~~~---i~H~dl~p~nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~y  189 (310)
T cd07865         113 NVKFTLSEIKKVMKMLLNGLYYIHRNK---ILHRDMKAANILITKDGILKLADFGLARAFSLSKNSKPNRYTNRVVTLWY  189 (310)
T ss_pred             ccCCCHHHHHHHHHHHHHHHHHHHHCC---eeccCCCHHHEEECCCCcEEECcCCCcccccCCcccCCCCccCcccCccc
Confidence            347899999999999999999999999   999999999999999999999999999866432211  111223456789


Q ss_pred             CCcccccCCC-cccccceEehhHHHHHHHhcccCCCCcCCCcccccccccC---------------------CCccccCc
Q 041793           82 MAPEYASDGK-FSVKSDVFSFGILLLEIISGKKNRGFYHSDNKLNLIGHVS---------------------MPSQLIDP  139 (224)
Q Consensus        82 ~aPE~~~~~~-~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~---------------------~~~~~~~~  139 (224)
                      +|||.+.+.. ++.++|+||||+++++|++|..||...........+....                     .+......
T Consensus       190 ~aPE~~~~~~~~~~~~Di~slG~~l~el~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  269 (310)
T cd07865         190 RPPELLLGERDYGPPIDMWGAGCIMAEMWTRSPIMQGNTEQHQLTLISQLCGSITPEVWPGVDKLELFKKMELPQGQKRK  269 (310)
T ss_pred             cCcHHhcCCcccCchhhhHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCChhhcccccchhhhhhccCCCccchh
Confidence            9999886543 6789999999999999999999886543221111111000                     00000000


Q ss_pred             cccCCcCHHHHHHHHHHHHHhccCCCCCCCChHHHHH
Q 041793          140 CIQGSFNLVEVIRCIHIGLLCVQQHPKDRPSMPSVIL  176 (224)
Q Consensus       140 ~~~~~~~~~~~~~~~~li~~cl~~dp~~Rps~~~v~~  176 (224)
                      .............+.++|.+||+.||++|||++++++
T Consensus       270 ~~~~l~~~~~~~~~~dli~~~l~~~P~~R~t~~e~l~  306 (310)
T cd07865         270 VKERLKPYVKDPHALDLIDKLLVLDPAKRIDADTALN  306 (310)
T ss_pred             hHHhcccccCCHHHHHHHHHHhcCChhhccCHHHHhc
Confidence            0000000011234568999999999999999999974


No 210
>cd06658 STKc_PAK5 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 5. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 5, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK5 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK5 is mainly express
Probab=99.94  E-value=5.4e-27  Score=188.40  Aligned_cols=160  Identities=23%  Similarity=0.371  Sum_probs=120.7

Q ss_pred             CCCChHHHHHHHHHHHHHHhhhhcCCCCceEecCCCCCceEECCCCCceEeeecceeecCCCCCCCcccccccccccCCc
Q 041793            5 KILDWPKRFHIICGTARGVMYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDEIEGNTNRVIGTYGYMAP   84 (224)
Q Consensus         5 ~~l~~~~~~~i~~qi~~~l~~Lh~~~~~~i~H~dl~~~nil~~~~~~~kl~df~~~~~~~~~~~~~~~~~~~~~~~y~aP   84 (224)
                      +.+++.+++.++.||+.||.|||+.+   ++|+||+|+||+++.++.++|+|||++........  ......++..|+||
T Consensus       113 ~~l~~~~~~~~~~qi~~~l~~LH~~~---ivH~dlkp~Nill~~~~~~kL~dfg~~~~~~~~~~--~~~~~~~~~~y~aP  187 (292)
T cd06658         113 TRMNEEQIATVCLSVLRALSYLHNQG---VIHRDIKSDSILLTSDGRIKLSDFGFCAQVSKEVP--KRKSLVGTPYWMAP  187 (292)
T ss_pred             CCCCHHHHHHHHHHHHHHHHHHHHCC---EeecCCCHHHEEEcCCCCEEEccCcchhhcccccc--cCceeecCccccCH
Confidence            46899999999999999999999999   99999999999999999999999999875432221  12234567889999


Q ss_pred             ccccCCCcccccceEehhHHHHHHHhcccCCCCcCCCcccccccccCCCccccCccccCCcCHHHHHHHHHHHHHhccCC
Q 041793           85 EYASDGKFSVKSDVFSFGILLLEIISGKKNRGFYHSDNKLNLIGHVSMPSQLIDPCIQGSFNLVEVIRCIHIGLLCVQQH  164 (224)
Q Consensus        85 E~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~d  164 (224)
                      |.+.+..++.++|+||||++++++++|+.||...........+.. .....     ......  ....+.+++.+||..|
T Consensus       188 E~~~~~~~~~~~Dv~slGvil~el~~g~~p~~~~~~~~~~~~~~~-~~~~~-----~~~~~~--~~~~~~~li~~~l~~~  259 (292)
T cd06658         188 EVISRLPYGTEVDIWSLGIMVIEMIDGEPPYFNEPPLQAMRRIRD-NLPPR-----VKDSHK--VSSVLRGFLDLMLVRE  259 (292)
T ss_pred             HHHccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHh-cCCCc-----cccccc--cCHHHHHHHHHHccCC
Confidence            999888889999999999999999999999754332211111110 01111     111111  1124667888999999


Q ss_pred             CCCCCChHHHHHH
Q 041793          165 PKDRPSMPSVILM  177 (224)
Q Consensus       165 p~~Rps~~~v~~~  177 (224)
                      |++|||++++++.
T Consensus       260 P~~Rpt~~~il~~  272 (292)
T cd06658         260 PSQRATAQELLQH  272 (292)
T ss_pred             hhHCcCHHHHhhC
Confidence            9999999999864


No 211
>cd05086 PTKc_Aatyk2 Catalytic domain of the Protein Tyrosine Kinase, Apoptosis-associated tyrosine kinase 2. Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase 2 (Aatyk2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk2 is a member of the Aatyk subfamily of proteins, which are receptor kinases containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk2 is also called lemur tyrosine kinase 2 (Lmtk2) or brain-enriched kinase (Brek). It is expressed at high levels in early postnatal brain, and has been shown to play a role in nerve growth factor (NGF) signaling. Studies with knockout mice reveal that Aatyk2 is essential for late stage
Probab=99.94  E-value=1.7e-26  Score=183.17  Aligned_cols=166  Identities=19%  Similarity=0.342  Sum_probs=114.9

Q ss_pred             CCCChHHHHHHHHHHHHHHhhhhcCCCCceEecCCCCCceEECCCCCceEeeecceeecCCCCCCCcccccccccccCCc
Q 041793            5 KILDWPKRFHIICGTARGVMYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDEIEGNTNRVIGTYGYMAP   84 (224)
Q Consensus         5 ~~l~~~~~~~i~~qi~~~l~~Lh~~~~~~i~H~dl~~~nil~~~~~~~kl~df~~~~~~~~~~~~~~~~~~~~~~~y~aP   84 (224)
                      +.+++..++.++.||+.||+|||+.+   ++|+||||+||+++.++.++++|||++................++..|+||
T Consensus        94 ~~~~~~~~~~~~~~i~~al~~lH~~~---i~H~dikp~nil~~~~~~~~l~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aP  170 (268)
T cd05086          94 RNSQLLLLQRMACEIAAGVTHMHKHN---FLHSDLALRNCFLTSDLTVKVGDYGIGPSRYKEDYIETEDDKCVPLRWLAP  170 (268)
T ss_pred             ccccHHHHHHHHHHHHHHHHHHHHCC---eeccCCccceEEEcCCccEEecccccccccCcchhhhcccCCcCcccccCc
Confidence            34667788899999999999999999   999999999999999999999999987643211111111223567789999


Q ss_pred             ccccC-------CCcccccceEehhHHHHHHHhc-ccCCCCcCCCcccccccccCCCccccCccccCCcCHHHHHHHHHH
Q 041793           85 EYASD-------GKFSVKSDVFSFGILLLEIISG-KKNRGFYHSDNKLNLIGHVSMPSQLIDPCIQGSFNLVEVIRCIHI  156 (224)
Q Consensus        85 E~~~~-------~~~~~~~Di~slG~il~~l~~g-~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l  156 (224)
                      |.+..       ..++.++|+||||+++|+|+++ ..||............. .......+++......+    ..+.++
T Consensus       171 E~~~~~~~~~~~~~~~~~~DiwslG~~l~el~~~~~~p~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~----~~~~~l  245 (268)
T cd05086         171 ELVGEFHGGLITAEQTKPSNVWALGVTLWELFENAAQPYSHLSDREVLNHVI-KDQQVKLFKPQLELPYS----ERWYEV  245 (268)
T ss_pred             hhcccccCccccCCCCCcchhHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHH-hhcccccCCCccCCCCc----HHHHHH
Confidence            98743       2356889999999999999974 56764332211111100 01111222333332222    245668


Q ss_pred             HHHhccCCCCCCCChHHHHHHhc
Q 041793          157 GLLCVQQHPKDRPSMPSVILMLG  179 (224)
Q Consensus       157 i~~cl~~dp~~Rps~~~v~~~L~  179 (224)
                      +..|| .+|++||++++|++.|.
T Consensus       246 ~~~c~-~~P~~Rp~~~~i~~~l~  267 (268)
T cd05086         246 LQFCW-LSPEKRATAEEVHRLLT  267 (268)
T ss_pred             HHHHh-hCcccCCCHHHHHHHhc
Confidence            88999 67999999999999874


No 212
>cd08528 STKc_Nek10 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 10. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 10 (Nek10) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek10 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. No function has yet been ascribed to Nek10. The gene encoding Nek10 is a putative causative gene for breast cancer; it is located within a breast cancer susceptibility loci on chromosome 3p24.
Probab=99.94  E-value=1.3e-26  Score=183.74  Aligned_cols=161  Identities=24%  Similarity=0.388  Sum_probs=122.8

Q ss_pred             CCCCChHHHHHHHHHHHHHHhhhhc-CCCCceEecCCCCCceEECCCCCceEeeecceeecCCCCCCCcccccccccccC
Q 041793            4 CKILDWPKRFHIICGTARGVMYLHQ-DSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDEIEGNTNRVIGTYGYM   82 (224)
Q Consensus         4 ~~~l~~~~~~~i~~qi~~~l~~Lh~-~~~~~i~H~dl~~~nil~~~~~~~kl~df~~~~~~~~~~~~~~~~~~~~~~~y~   82 (224)
                      ...+++..++.++.|++.||.|||+ .+   ++|+||+|.||+++.++.++++|||.+.......   ......++..|+
T Consensus       107 ~~~~~~~~~~~~~~~l~~~l~~lh~~~~---i~H~dl~~~nil~~~~~~~~l~dfg~~~~~~~~~---~~~~~~~~~~~~  180 (269)
T cd08528         107 KQRFTEERIWNIFVQMVLALRYLHKEKR---IVHRDLTPNNIMLGEDDKVTITDFGLAKQKQPES---KLTSVVGTILYS  180 (269)
T ss_pred             cCCCCHHHHHHHHHHHHHHHHHhccCCc---eeecCCCHHHEEECCCCcEEEecccceeeccccc---ccccccCcccCc
Confidence            4568899999999999999999996 66   9999999999999999999999999998654332   223346778899


Q ss_pred             CcccccCCCcccccceEehhHHHHHHHhcccCCCCcCCCcccccccccCCCccccCccccCCcCHHHHHHHHHHHHHhcc
Q 041793           83 APEYASDGKFSVKSDVFSFGILLLEIISGKKNRGFYHSDNKLNLIGHVSMPSQLIDPCIQGSFNLVEVIRCIHIGLLCVQ  162 (224)
Q Consensus        83 aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~  162 (224)
                      +||.+.+..++.++|+||||+++|++++|+.||................     ..+......    ...+.+++.+||+
T Consensus       181 ~Pe~~~~~~~~~~~Dv~slG~ll~~l~~g~~p~~~~~~~~~~~~~~~~~-----~~~~~~~~~----~~~l~~li~~cl~  251 (269)
T cd08528         181 CPEIVKNEPYGEKADVWAFGCILYQMCTLQPPFYSTNMLSLATKIVEAV-----YEPLPEGMY----SEDVTDVITSCLT  251 (269)
T ss_pred             ChhhhcCCCCchHHHHHHHHHHHHHHHhCCCcccccCHHHHHHHHhhcc-----CCcCCcccC----CHHHHHHHHHHCC
Confidence            9999988888999999999999999999999975332211111110000     000001011    1346788899999


Q ss_pred             CCCCCCCChHHHHHHhc
Q 041793          163 QHPKDRPSMPSVILMLG  179 (224)
Q Consensus       163 ~dp~~Rps~~~v~~~L~  179 (224)
                      .||++||++.++..+++
T Consensus       252 ~~p~~Rp~~~e~~~~~~  268 (269)
T cd08528         252 PDAEARPDIIQVSAMIS  268 (269)
T ss_pred             CCCccCCCHHHHHHHhc
Confidence            99999999999998875


No 213
>KOG0604 consensus MAP kinase-activated protein kinase 2 [Signal transduction mechanisms]
Probab=99.94  E-value=5.2e-27  Score=180.72  Aligned_cols=165  Identities=21%  Similarity=0.248  Sum_probs=124.2

Q ss_pred             CCCCCCChHHHHHHHHHHHHHHhhhhcCCCCceEecCCCCCceEEC---CCCCceEeeecceeecCCCCCCCcccccccc
Q 041793            2 ERCKILDWPKRFHIICGTARGVMYLHQDSRLRIIHRDLKASNVLLD---QDMNPKISDFGLARAFGGDEIEGNTNRVIGT   78 (224)
Q Consensus         2 ~~~~~l~~~~~~~i~~qi~~~l~~Lh~~~~~~i~H~dl~~~nil~~---~~~~~kl~df~~~~~~~~~~~~~~~~~~~~~   78 (224)
                      +..+.+++.+.-.|+.||..|+.|||+.+   |.||||||+|+|..   .|..+||+|||+|......   ....+.-.|
T Consensus       153 ~g~~afTErea~eI~~qI~~Av~~lH~~n---IAHRDlKpENLLyt~t~~na~lKLtDfGFAK~t~~~---~~L~TPc~T  226 (400)
T KOG0604|consen  153 RGDQAFTEREASEIMKQIGLAVRYLHSMN---IAHRDLKPENLLYTTTSPNAPLKLTDFGFAKETQEP---GDLMTPCFT  226 (400)
T ss_pred             cccccchHHHHHHHHHHHHHHHHHHHhcc---hhhccCChhheeeecCCCCcceEecccccccccCCC---ccccCCccc
Confidence            34567999999999999999999999999   99999999999996   4567899999999865321   112223447


Q ss_pred             cccCCcccccCCCcccccceEehhHHHHHHHhcccCCCCcCCCccccccc-ccCCC-ccccCccccCCcCHHHHHHHHHH
Q 041793           79 YGYMAPEYASDGKFSVKSDVFSFGILLLEIISGKKNRGFYHSDNKLNLIG-HVSMP-SQLIDPCIQGSFNLVEVIRCIHI  156 (224)
Q Consensus        79 ~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~-~~~~~-~~~~~~~~~~~~~~~~~~~~~~l  156 (224)
                      +.|.|||++-...|+..+|+||+|+++|-|++|.+||.--.......-+. .+... ..++.+.+.     .-.....++
T Consensus       227 PyYvaPevlg~eKydkscdmwSlgVimYIlLCGyPPFYS~hg~aispgMk~rI~~gqy~FP~pEWs-----~VSe~aKdl  301 (400)
T KOG0604|consen  227 PYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKRRIRTGQYEFPEPEWS-----CVSEAAKDL  301 (400)
T ss_pred             ccccCHHHhCchhcCCCCCccchhHHHHHhhcCCCcccccCCccCChhHHhHhhccCccCCChhHh-----HHHHHHHHH
Confidence            88999999988889999999999999999999999986544332222221 12111 122333222     112345688


Q ss_pred             HHHhccCCCCCCCChHHHHHH
Q 041793          157 GLLCVQQHPKDRPSMPSVILM  177 (224)
Q Consensus       157 i~~cl~~dp~~Rps~~~v~~~  177 (224)
                      |+.+|..+|.+|.++++++..
T Consensus       302 IR~LLkt~PteRlTI~~~m~h  322 (400)
T KOG0604|consen  302 IRKLLKTEPTERLTIEEVMDH  322 (400)
T ss_pred             HHHHhcCCchhheeHHHhhcC
Confidence            899999999999999999763


No 214
>KOG1095 consensus Protein tyrosine kinase [Signal transduction mechanisms]
Probab=99.94  E-value=6.1e-27  Score=207.47  Aligned_cols=165  Identities=32%  Similarity=0.435  Sum_probs=125.6

Q ss_pred             CCCCChHHHHHHHHHHHHHHhhhhcCCCCceEecCCCCCceEECCCCCceEeeecceeecCCCCCCCcccccccccccCC
Q 041793            4 CKILDWPKRFHIICGTARGVMYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDEIEGNTNRVIGTYGYMA   83 (224)
Q Consensus         4 ~~~l~~~~~~~i~~qi~~~l~~Lh~~~~~~i~H~dl~~~nil~~~~~~~kl~df~~~~~~~~~~~~~~~~~~~~~~~y~a   83 (224)
                      ...|+....+.++.|||.|.+||+++.   ++||||...|||++....+|++|||+|+-......-.......-+..|+|
T Consensus       796 ~~~L~~~dLl~~a~dvA~G~~YLe~~~---fvHRDLAaRNCLL~~~r~VKIaDFGlArDiy~~~yyr~~~~a~lPvkWm~  872 (1025)
T KOG1095|consen  796 PSNLSMRDLLAFALDVAKGMNYLESKH---FVHRDLAARNCLLDERRVVKIADFGLARDIYDKDYYRKHGEAMLPVKWMP  872 (1025)
T ss_pred             CCCCCHHHHHHHHHHHhhhhHHHHhCC---CcCcchhhhheeecccCcEEEcccchhHhhhhchheeccCccccceecCC
Confidence            567899999999999999999999999   99999999999999999999999999983322111111111122468999


Q ss_pred             cccccCCCcccccceEehhHHHHHHHh-cccCCCCcCCCcccccccccCCCccccCccccCCcCHHHHHHHHHHHHHhcc
Q 041793           84 PEYASDGKFSVKSDVFSFGILLLEIIS-GKKNRGFYHSDNKLNLIGHVSMPSQLIDPCIQGSFNLVEVIRCIHIGLLCVQ  162 (224)
Q Consensus        84 PE~~~~~~~~~~~Di~slG~il~~l~~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~  162 (224)
                      ||.++.+.++.|+||||||+++||+++ |..||......+...   .+.....+..+.    +-+   ..+.++|..||+
T Consensus       873 PEsl~d~iFtskSDvWsFGVllWEifslG~~PY~~~~n~~v~~---~~~~ggRL~~P~----~CP---~~ly~lM~~CW~  942 (1025)
T KOG1095|consen  873 PESLKDGIFTSKSDVWSFGVLLWEIFSLGATPYPSRSNFEVLL---DVLEGGRLDPPS----YCP---EKLYQLMLQCWK  942 (1025)
T ss_pred             HHHHhhcccccccchhhhHHHHHHHHhCCCCCCCCcchHHHHH---HHHhCCccCCCC----CCC---hHHHHHHHHHcc
Confidence            999999999999999999999999997 777876555444333   222222222221    111   135589999999


Q ss_pred             CCCCCCCChHHHHHHhccC
Q 041793          163 QHPKDRPSMPSVILMLGSE  181 (224)
Q Consensus       163 ~dp~~Rps~~~v~~~L~~~  181 (224)
                      .+|++||+|..|++.+...
T Consensus       943 ~~pe~RP~F~~i~~q~~~i  961 (1025)
T KOG1095|consen  943 HDPEDRPSFRTIVEQDPAI  961 (1025)
T ss_pred             CChhhCccHHHHHhhhhhh
Confidence            9999999999999987655


No 215
>cd06655 STKc_PAK2 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 2. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 2, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK2 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding 
Probab=99.94  E-value=7.1e-27  Score=188.05  Aligned_cols=160  Identities=24%  Similarity=0.370  Sum_probs=120.5

Q ss_pred             CCCChHHHHHHHHHHHHHHhhhhcCCCCceEecCCCCCceEECCCCCceEeeecceeecCCCCCCCcccccccccccCCc
Q 041793            5 KILDWPKRFHIICGTARGVMYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDEIEGNTNRVIGTYGYMAP   84 (224)
Q Consensus         5 ~~l~~~~~~~i~~qi~~~l~~Lh~~~~~~i~H~dl~~~nil~~~~~~~kl~df~~~~~~~~~~~~~~~~~~~~~~~y~aP   84 (224)
                      ..+++.+++.++.|++.||.|||+.|   ++|+||+|+||+++.++.++++|||++.........  .....++..|+||
T Consensus       110 ~~l~~~~~~~i~~~l~~al~~LH~~~---i~H~dL~p~Nili~~~~~~kl~dfg~~~~~~~~~~~--~~~~~~~~~y~aP  184 (296)
T cd06655         110 TCMDEAQIAAVCRECLQALEFLHANQ---VIHRDIKSDNVLLGMDGSVKLTDFGFCAQITPEQSK--RSTMVGTPYWMAP  184 (296)
T ss_pred             cCCCHHHHHHHHHHHHHHHHHHHHCC---cccCCCCHHHEEECCCCCEEEccCccchhccccccc--CCCcCCCccccCc
Confidence            46899999999999999999999999   999999999999999999999999988754322111  1223567789999


Q ss_pred             ccccCCCcccccceEehhHHHHHHHhcccCCCCcCCCcccccccccCCCccccCccccCCcCHHHHHHHHHHHHHhccCC
Q 041793           85 EYASDGKFSVKSDVFSFGILLLEIISGKKNRGFYHSDNKLNLIGHVSMPSQLIDPCIQGSFNLVEVIRCIHIGLLCVQQH  164 (224)
Q Consensus        85 E~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~d  164 (224)
                      |.+.+..++.++|+||||+++|++++|+.||.................+ ..   ......+    ..+.++|.+||..|
T Consensus       185 E~~~~~~~~~~~Dv~slGvil~~lltg~~pf~~~~~~~~~~~~~~~~~~-~~---~~~~~~~----~~~~~li~~~l~~d  256 (296)
T cd06655         185 EVVTRKAYGPKVDIWSLGIMAIEMVEGEPPYLNENPLRALYLIATNGTP-EL---QNPEKLS----PIFRDFLNRCLEMD  256 (296)
T ss_pred             chhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhcCCc-cc---CCcccCC----HHHHHHHHHHhhcC
Confidence            9998888899999999999999999999998654332211111111100 00   0011111    24667889999999


Q ss_pred             CCCCCChHHHHHH
Q 041793          165 PKDRPSMPSVILM  177 (224)
Q Consensus       165 p~~Rps~~~v~~~  177 (224)
                      |++||++.+|++.
T Consensus       257 p~~Rpt~~~il~~  269 (296)
T cd06655         257 VEKRGSAKELLQH  269 (296)
T ss_pred             hhhCCCHHHHhhC
Confidence            9999999999864


No 216
>cd06638 STKc_myosinIIIA Catalytic domain of the Protein Serine/Threonine Kinase, Class IIIA myosin. Serine/threonine kinases (STKs), class IIIA myosin subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain. Class III myosins may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. In photoreceptor cells, they may also function as cargo carriers during light-dependent translocation of proteins such as transducin and arrestin. Class IIIA myosin is highly expressed in retina and in inner ear
Probab=99.94  E-value=2.3e-26  Score=183.84  Aligned_cols=161  Identities=24%  Similarity=0.362  Sum_probs=119.2

Q ss_pred             CCCCChHHHHHHHHHHHHHHhhhhcCCCCceEecCCCCCceEECCCCCceEeeecceeecCCCCCCCcccccccccccCC
Q 041793            4 CKILDWPKRFHIICGTARGVMYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDEIEGNTNRVIGTYGYMA   83 (224)
Q Consensus         4 ~~~l~~~~~~~i~~qi~~~l~~Lh~~~~~~i~H~dl~~~nil~~~~~~~kl~df~~~~~~~~~~~~~~~~~~~~~~~y~a   83 (224)
                      +..+++..++.++.|++.||.|||+.+   ++|+||+|+||+++.++.++++|||++........  ......++..|+|
T Consensus       118 ~~~~~~~~~~~~~~~i~~~l~~lH~~~---i~H~dlkp~nili~~~~~~kl~dfg~~~~~~~~~~--~~~~~~~~~~y~a  192 (286)
T cd06638         118 GERMEEPIIAYILHEALMGLQHLHVNK---TIHRDVKGNNILLTTEGGVKLVDFGVSAQLTSTRL--RRNTSVGTPFWMA  192 (286)
T ss_pred             CccccHHHHHHHHHHHHHHHHHHHhCC---ccccCCCHHhEEECCCCCEEEccCCceeecccCCC--ccccccCCCcccC
Confidence            456888999999999999999999999   99999999999999999999999999876543221  1223457889999


Q ss_pred             cccccC-----CCcccccceEehhHHHHHHHhcccCCCCcCCCcccccccccCCCccccCccccCCcCHHHHHHHHHHHH
Q 041793           84 PEYASD-----GKFSVKSDVFSFGILLLEIISGKKNRGFYHSDNKLNLIGHVSMPSQLIDPCIQGSFNLVEVIRCIHIGL  158 (224)
Q Consensus        84 PE~~~~-----~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~  158 (224)
                      ||.+..     ..++.++|+|||||++|+|++|+.||............... .......   ....    ...+.+++.
T Consensus       193 PE~~~~~~~~~~~~~~~~Dv~slGvi~~el~~g~~p~~~~~~~~~~~~~~~~-~~~~~~~---~~~~----~~~~~~li~  264 (286)
T cd06638         193 PEVIACEQQLDSTYDARCDVWSLGITAIELGDGDPPLADLHPMRALFKIPRN-PPPTLHQ---PELW----SNEFNDFIR  264 (286)
T ss_pred             hhhhchhhhccccccchhhhhhHHHHHHHHhcCCCCCCCCchhHHHhhcccc-CCCcccC---CCCc----CHHHHHHHH
Confidence            998753     44688999999999999999999997543321111100000 0000000   0111    124678899


Q ss_pred             HhccCCCCCCCChHHHHHH
Q 041793          159 LCVQQHPKDRPSMPSVILM  177 (224)
Q Consensus       159 ~cl~~dp~~Rps~~~v~~~  177 (224)
                      +||+.||++|||+.+|++.
T Consensus       265 ~~l~~~p~~Rps~~ell~~  283 (286)
T cd06638         265 KCLTKDYEKRPTVSDLLQH  283 (286)
T ss_pred             HHccCCcccCCCHHHHhhc
Confidence            9999999999999999864


No 217
>smart00219 TyrKc Tyrosine kinase, catalytic domain. Phosphotransferases. Tyrosine-specific kinase subfamily.
Probab=99.94  E-value=9.8e-27  Score=182.81  Aligned_cols=158  Identities=33%  Similarity=0.500  Sum_probs=119.7

Q ss_pred             CChHHHHHHHHHHHHHHhhhhcCCCCceEecCCCCCceEECCCCCceEeeecceeecCCCCCCCcccccccccccCCccc
Q 041793            7 LDWPKRFHIICGTARGVMYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDEIEGNTNRVIGTYGYMAPEY   86 (224)
Q Consensus         7 l~~~~~~~i~~qi~~~l~~Lh~~~~~~i~H~dl~~~nil~~~~~~~kl~df~~~~~~~~~~~~~~~~~~~~~~~y~aPE~   86 (224)
                      +++.+++.++.|++.||.+||+.+   ++|+||+|+||+++.++.++++|||++............ ...++..|++||.
T Consensus       100 ~~~~~~~~~~~ql~~~l~~lh~~~---~~h~dl~~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~-~~~~~~~y~~Pe~  175 (258)
T smart00219      100 LSLSDLLSFALQIARGMEYLESKN---FIHRDLAARNCLVGENLVVKISDFGLSRDLYDDDYYKKK-GGKLPIRWMAPES  175 (258)
T ss_pred             CCHHHHHHHHHHHHHHHHHHhcCC---eeecccccceEEEccCCeEEEcccCCceecccccccccc-cCCCcccccChHH
Confidence            899999999999999999999999   999999999999999999999999999876543221111 1235678999999


Q ss_pred             ccCCCcccccceEehhHHHHHHHh-cccCCCCcCCCcccccccccCCCccccCccccCCcCHHHHHHHHHHHHHhccCCC
Q 041793           87 ASDGKFSVKSDVFSFGILLLEIIS-GKKNRGFYHSDNKLNLIGHVSMPSQLIDPCIQGSFNLVEVIRCIHIGLLCVQQHP  165 (224)
Q Consensus        87 ~~~~~~~~~~Di~slG~il~~l~~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dp  165 (224)
                      +.+..++.++|+||||++++++++ |..||...............   .....   ...    ....+.+++.+||..||
T Consensus       176 ~~~~~~~~~~Di~slG~i~~~l~~~g~~p~~~~~~~~~~~~~~~~---~~~~~---~~~----~~~~~~~~i~~~l~~~p  245 (258)
T smart00219      176 LKDGKFTSKSDVWSFGVLLWEIFTLGESPYPGMSNEEVLEYLKKG---YRLPK---PEN----CPPEIYKLMLQCWAEDP  245 (258)
T ss_pred             hccCCCCcchhHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHhcC---CCCCC---CCc----CCHHHHHHHHHHCcCCh
Confidence            988888999999999999999998 77776542222211111111   11111   111    12347779999999999


Q ss_pred             CCCCChHHHHHHh
Q 041793          166 KDRPSMPSVILML  178 (224)
Q Consensus       166 ~~Rps~~~v~~~L  178 (224)
                      ++|||+.++++.|
T Consensus       246 ~~Rpt~~~ll~~l  258 (258)
T smart00219      246 EDRPTFSELVEIL  258 (258)
T ss_pred             hhCcCHHHHHhhC
Confidence            9999999998764


No 218
>cd06645 STKc_MAP4K3 Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-activated protein kinase kinase kinase kinase 3. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 3 (MAPKKKK3 or MAP4K3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated 
Probab=99.94  E-value=1.2e-26  Score=183.73  Aligned_cols=162  Identities=24%  Similarity=0.380  Sum_probs=118.5

Q ss_pred             CCCCChHHHHHHHHHHHHHHhhhhcCCCCceEecCCCCCceEECCCCCceEeeecceeecCCCCCCCcccccccccccCC
Q 041793            4 CKILDWPKRFHIICGTARGVMYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDEIEGNTNRVIGTYGYMA   83 (224)
Q Consensus         4 ~~~l~~~~~~~i~~qi~~~l~~Lh~~~~~~i~H~dl~~~nil~~~~~~~kl~df~~~~~~~~~~~~~~~~~~~~~~~y~a   83 (224)
                      .+.+++.+++.++.|++.||.|||+.|   ++|+||+|+||+++.++.++++|||++........  ......++..|+|
T Consensus       100 ~~~~~~~~~~~~~~~i~~~l~~lH~~~---i~H~dlkp~nili~~~~~~~l~dfg~~~~~~~~~~--~~~~~~~~~~y~a  174 (267)
T cd06645         100 TGPLSESQIAYVSRETLQGLYYLHSKG---KMHRDIKGANILLTDNGHVKLADFGVSAQITATIA--KRKSFIGTPYWMA  174 (267)
T ss_pred             cCCCCHHHHHHHHHHHHHHHHHHHHCC---eecCCCCHHHEEECCCCCEEECcceeeeEccCccc--ccccccCcccccC
Confidence            457899999999999999999999999   99999999999999999999999999876533211  1122457789999


Q ss_pred             ccccc---CCCcccccceEehhHHHHHHHhcccCCCCcCCCcccccccccCCCccccCccccCCcCHHHHHHHHHHHHHh
Q 041793           84 PEYAS---DGKFSVKSDVFSFGILLLEIISGKKNRGFYHSDNKLNLIGHVSMPSQLIDPCIQGSFNLVEVIRCIHIGLLC  160 (224)
Q Consensus        84 PE~~~---~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~c  160 (224)
                      ||.+.   ...++.++|+|||||++|+|++|..||.................    ..+........  ...+.+++.+|
T Consensus       175 PE~~~~~~~~~~~~~~DvwSlG~il~~l~~~~~p~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~--~~~~~~li~~~  248 (267)
T cd06645         175 PEVAAVERKGGYNQLCDIWAVGITAIELAELQPPMFDLHPMRALFLMTKSNF----QPPKLKDKMKW--SNSFHHFVKMA  248 (267)
T ss_pred             hhhhccccCCCCCchhhhHHHHHHHHHHhcCCCCcccccchhhHHhhhccCC----CCCcccccCCC--CHHHHHHHHHH
Confidence            99874   44578899999999999999999999754332211111111110    01111110010  12366888999


Q ss_pred             ccCCCCCCCChHHHHH
Q 041793          161 VQQHPKDRPSMPSVIL  176 (224)
Q Consensus       161 l~~dp~~Rps~~~v~~  176 (224)
                      |+.+|++||++++|++
T Consensus       249 l~~~P~~R~~~~~ll~  264 (267)
T cd06645         249 LTKNPKKRPTAEKLLQ  264 (267)
T ss_pred             ccCCchhCcCHHHHhc
Confidence            9999999999999875


No 219
>cd06628 STKc_MAPKKK_Byr2_like Catalytic domain of fungal Byr2-like MAP Kinase Kinase Kinases. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Byr2-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Schizosaccharomyces pombe Byr2, Saccharomyces cerevisiae and Cryptococcus neoformans Ste11, and related proteins. They contain an N-terminal SAM (sterile alpha-motif) domain, which mediates protein-protein interaction, and a C-terminal catalytic domain. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate
Probab=99.94  E-value=7.9e-27  Score=184.63  Aligned_cols=160  Identities=25%  Similarity=0.421  Sum_probs=120.5

Q ss_pred             CCCCChHHHHHHHHHHHHHHhhhhcCCCCceEecCCCCCceEECCCCCceEeeecceeecCCCCCC----Cccccccccc
Q 041793            4 CKILDWPKRFHIICGTARGVMYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDEIE----GNTNRVIGTY   79 (224)
Q Consensus         4 ~~~l~~~~~~~i~~qi~~~l~~Lh~~~~~~i~H~dl~~~nil~~~~~~~kl~df~~~~~~~~~~~~----~~~~~~~~~~   79 (224)
                      .+.+++..+..++.|++.||.|||+.|   ++|+||+|+||+++.++.++++|||.+.........    .......++.
T Consensus       100 ~~~l~~~~~~~~~~~l~~~l~~lH~~~---ivH~di~p~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~  176 (267)
T cd06628         100 YGAFEETLVRNFVRQILKGLNYLHNRG---IIHRDIKGANILVDNKGGIKISDFGISKKLEANSLSTKTNGARPSLQGSV  176 (267)
T ss_pred             ccCccHHHHHHHHHHHHHHHHHHHhcC---cccccCCHHHEEEcCCCCEEecccCCCcccccccccCCccccccccCCCc
Confidence            467889999999999999999999999   999999999999999999999999998766422111    1111234677


Q ss_pred             ccCCcccccCCCcccccceEehhHHHHHHHhcccCCCCcCCCcccccccccCCCccccCccccCCcCHHHHHHHHHHHHH
Q 041793           80 GYMAPEYASDGKFSVKSDVFSFGILLLEIISGKKNRGFYHSDNKLNLIGHVSMPSQLIDPCIQGSFNLVEVIRCIHIGLL  159 (224)
Q Consensus        80 ~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~  159 (224)
                      .|+|||.+.+..++.++|+||||++++++++|+.||..............      ...+......    ...+.+++.+
T Consensus       177 ~y~~pe~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~~~~------~~~~~~~~~~----~~~~~~li~~  246 (267)
T cd06628         177 FWMAPEVVKQTSYTRKADIWSLGCLVVEMLTGKHPFPDCTQLQAIFKIGE------NASPEIPSNI----SSEAIDFLEK  246 (267)
T ss_pred             CccChhHhccCCCCchhhhHHHHHHHHHHhhCCCCCCCccHHHHHHHHhc------cCCCcCCccc----CHHHHHHHHH
Confidence            89999999888889999999999999999999999865332211110000      0011111111    1346788899


Q ss_pred             hccCCCCCCCChHHHHH
Q 041793          160 CVQQHPKDRPSMPSVIL  176 (224)
Q Consensus       160 cl~~dp~~Rps~~~v~~  176 (224)
                      ||+.||++||++.+|++
T Consensus       247 ~l~~~p~~Rp~~~~il~  263 (267)
T cd06628         247 TFEIDHNKRPTAAELLK  263 (267)
T ss_pred             HccCCchhCcCHHHHhh
Confidence            99999999999999975


No 220
>cd06639 STKc_myosinIIIB Catalytic domain of the Protein Serine/Threonine Kinase, Class IIIB myosin. Serine/threonine kinases (STKs), class IIIB myosin subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain. Class III myosins may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. They may also function as cargo carriers during light-dependent translocation, in photoreceptor cells, of proteins such as transducin and arrestin. Class IIIB myosin is expressed highly in retina. It is also pre
Probab=99.94  E-value=1.5e-26  Score=185.49  Aligned_cols=160  Identities=28%  Similarity=0.376  Sum_probs=118.4

Q ss_pred             CCCCChHHHHHHHHHHHHHHhhhhcCCCCceEecCCCCCceEECCCCCceEeeecceeecCCCCCCCcccccccccccCC
Q 041793            4 CKILDWPKRFHIICGTARGVMYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDEIEGNTNRVIGTYGYMA   83 (224)
Q Consensus         4 ~~~l~~~~~~~i~~qi~~~l~~Lh~~~~~~i~H~dl~~~nil~~~~~~~kl~df~~~~~~~~~~~~~~~~~~~~~~~y~a   83 (224)
                      .+.+++..++.++.|++.||+|||+.+   ++|+||+|+||+++.++.++++|||++........  ......++..|++
T Consensus       122 ~~~~~~~~~~~~~~qi~~al~~lH~~~---ivH~dlkp~nili~~~~~~kl~dfg~~~~~~~~~~--~~~~~~~~~~y~a  196 (291)
T cd06639         122 GQRLDEAMISYILYGALLGLQHLHNNR---IIHRDVKGNNILLTTEGGVKLVDFGVSAQLTSTRL--RRNTSVGTPFWMA  196 (291)
T ss_pred             CCCCCHHHHHHHHHHHHHHHHHHHhCC---eeccCCCHHHEEEcCCCCEEEeecccchhcccccc--cccCccCCccccC
Confidence            467899999999999999999999999   99999999999999999999999999876532211  1122356778999


Q ss_pred             cccccCC-----CcccccceEehhHHHHHHHhcccCCCCcCCCcccccccccCCCccccCccccCCcCHHHHHHHHHHHH
Q 041793           84 PEYASDG-----KFSVKSDVFSFGILLLEIISGKKNRGFYHSDNKLNLIGHVSMPSQLIDPCIQGSFNLVEVIRCIHIGL  158 (224)
Q Consensus        84 PE~~~~~-----~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~  158 (224)
                      ||.+...     .++.++|+||||+++|++++|+.||...........+.... ......   .    ......+.++|.
T Consensus       197 PE~~~~~~~~~~~~~~~~Di~slGvi~~el~~g~~p~~~~~~~~~~~~~~~~~-~~~~~~---~----~~~~~~l~~li~  268 (291)
T cd06639         197 PEVIACEQQYDYSYDARCDVWSLGITAIELGDGDPPLFDMHPVKTLFKIPRNP-PPTLLH---P----EKWCRSFNHFIS  268 (291)
T ss_pred             hhhhcCCCCcccccCCccchHHHHHHHHHHhhCCCCCCCCcHHHHHHHHhcCC-CCCCCc---c----cccCHHHHHHHH
Confidence            9987543     25789999999999999999999986433211111110000 000000   0    011234778999


Q ss_pred             HhccCCCCCCCChHHHHH
Q 041793          159 LCVQQHPKDRPSMPSVIL  176 (224)
Q Consensus       159 ~cl~~dp~~Rps~~~v~~  176 (224)
                      +||+.+|++||++.++++
T Consensus       269 ~~l~~~p~~Rps~~~il~  286 (291)
T cd06639         269 QCLIKDFEARPSVTHLLE  286 (291)
T ss_pred             HHhhcChhhCcCHHHHhc
Confidence            999999999999999975


No 221
>cd06617 PKc_MKK3_6 Catalytic domain of the dual-specificity Protein Kinases, MAP kinase kinases 3 and 6. Protein kinases (PKs), MAP kinase kinase 3 (MKK3) and MKK6 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK3 and MKK6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK3 and MKK6 are dual-specificity PKs
Probab=99.94  E-value=2e-26  Score=183.79  Aligned_cols=158  Identities=28%  Similarity=0.407  Sum_probs=117.4

Q ss_pred             CCCCChHHHHHHHHHHHHHHhhhhcC-CCCceEecCCCCCceEECCCCCceEeeecceeecCCCCCCCcccccccccccC
Q 041793            4 CKILDWPKRFHIICGTARGVMYLHQD-SRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDEIEGNTNRVIGTYGYM   82 (224)
Q Consensus         4 ~~~l~~~~~~~i~~qi~~~l~~Lh~~-~~~~i~H~dl~~~nil~~~~~~~kl~df~~~~~~~~~~~~~~~~~~~~~~~y~   82 (224)
                      ...+++..++.++.||+.||.|||++ +   ++|+||+|+||+++.++.++++|||++.......   ......++..|+
T Consensus        97 ~~~~~~~~~~~~~~qi~~~l~~lH~~~~---i~h~dlkp~nil~~~~~~~kl~dfg~~~~~~~~~---~~~~~~~~~~y~  170 (283)
T cd06617          97 GLTIPEDILGKIAVSIVKALEYLHSKLS---VIHRDVKPSNVLINRNGQVKLCDFGISGYLVDSV---AKTIDAGCKPYM  170 (283)
T ss_pred             CCCCCHHHHHHHHHHHHHHHHHHhhcCC---eecCCCCHHHEEECCCCCEEEeeccccccccccc---ccccccCCcccc
Confidence            35789999999999999999999997 7   9999999999999999999999999987653221   112245677899


Q ss_pred             CcccccC----CCcccccceEehhHHHHHHHhcccCCCCcCCCcccccccccC-CCccccCccccCCcCHHHHHHHHHHH
Q 041793           83 APEYASD----GKFSVKSDVFSFGILLLEIISGKKNRGFYHSDNKLNLIGHVS-MPSQLIDPCIQGSFNLVEVIRCIHIG  157 (224)
Q Consensus        83 aPE~~~~----~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~li  157 (224)
                      |||.+.+    ..++.++|+||||+++|+|++|+.||...... ...+..... .....+.    ...    ...+.+++
T Consensus       171 aPE~~~~~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~-~~~~~~~~~~~~~~~~~----~~~----~~~l~~li  241 (283)
T cd06617         171 APERINPELNQKGYDVKSDVWSLGITMIELATGRFPYDSWKTP-FQQLKQVVEEPSPQLPA----EKF----SPEFQDFV  241 (283)
T ss_pred             ChhhcCCcccccccCccccchhhHHHHHHHHhCCCCCCccccC-HHHHHHHHhcCCCCCCc----ccc----CHHHHHHH
Confidence            9998864    34578999999999999999999998543221 011111000 0001100    011    13467899


Q ss_pred             HHhccCCCCCCCChHHHHH
Q 041793          158 LLCVQQHPKDRPSMPSVIL  176 (224)
Q Consensus       158 ~~cl~~dp~~Rps~~~v~~  176 (224)
                      .+||..+|++||++.++++
T Consensus       242 ~~~l~~~p~~Rp~~~~il~  260 (283)
T cd06617         242 NKCLKKNYKERPNYPELLQ  260 (283)
T ss_pred             HHHccCChhhCcCHHHHhc
Confidence            9999999999999999976


No 222
>cd06651 STKc_MEKK3 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 3. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK3 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates the MAPK kinase MEK5 (or MKK5), which in turn phosphorylates and activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK3 plays an essential role in embryonic angiogenesis and early heart development
Probab=99.94  E-value=1.2e-26  Score=183.74  Aligned_cols=160  Identities=25%  Similarity=0.367  Sum_probs=116.6

Q ss_pred             CCCCChHHHHHHHHHHHHHHhhhhcCCCCceEecCCCCCceEECCCCCceEeeecceeecCCCCCC-CcccccccccccC
Q 041793            4 CKILDWPKRFHIICGTARGVMYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDEIE-GNTNRVIGTYGYM   82 (224)
Q Consensus         4 ~~~l~~~~~~~i~~qi~~~l~~Lh~~~~~~i~H~dl~~~nil~~~~~~~kl~df~~~~~~~~~~~~-~~~~~~~~~~~y~   82 (224)
                      .+.+++..++.++.|++.||.|||+.+   ++|+||+|+||+++.++.++|+|||++......... .......++..|+
T Consensus       100 ~~~l~~~~~~~~~~qi~~~l~~LH~~~---i~H~~l~p~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~y~  176 (266)
T cd06651         100 YGALTESVTRKYTRQILEGMSYLHSNM---IVHRDIKGANILRDSAGNVKLGDFGASKRLQTICMSGTGIRSVTGTPYWM  176 (266)
T ss_pred             cCCCCHHHHHHHHHHHHHHHHHHHhCC---eeeCCCCHHHEEECCCCCEEEccCCCccccccccccCCccccCCcccccc
Confidence            356889999999999999999999999   999999999999999999999999998765321111 1112234677899


Q ss_pred             CcccccCCCcccccceEehhHHHHHHHhcccCCCCcCCCcccccccccCCCccccCccccCCcCHHHHHHHHHHHHHhcc
Q 041793           83 APEYASDGKFSVKSDVFSFGILLLEIISGKKNRGFYHSDNKLNLIGHVSMPSQLIDPCIQGSFNLVEVIRCIHIGLLCVQ  162 (224)
Q Consensus        83 aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~  162 (224)
                      |||.+.+..++.++|+||||++++++++|+.||........   +.....  ....+..+...    ...+..++ +||.
T Consensus       177 aPE~~~~~~~~~~~Dv~slG~i~~el~~g~~pf~~~~~~~~---~~~~~~--~~~~~~~~~~~----~~~~~~li-~~~~  246 (266)
T cd06651         177 SPEVISGEGYGRKADVWSLGCTVVEMLTEKPPWAEYEAMAA---IFKIAT--QPTNPQLPSHI----SEHARDFL-GCIF  246 (266)
T ss_pred             CHHHhCCCCCCchhhhHHHHHHHHHHHHCCCCccccchHHH---HHHHhc--CCCCCCCchhc----CHHHHHHH-HHhc
Confidence            99999888889999999999999999999999864322111   111110  00011111111    12334455 7888


Q ss_pred             CCCCCCCChHHHHH
Q 041793          163 QHPKDRPSMPSVIL  176 (224)
Q Consensus       163 ~dp~~Rps~~~v~~  176 (224)
                      .+|++||++++|++
T Consensus       247 ~~p~~Rp~~~eil~  260 (266)
T cd06651         247 VEARHRPSAEELLR  260 (266)
T ss_pred             CChhhCcCHHHHhc
Confidence            99999999999965


No 223
>cd05626 STKc_LATS2 Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor 2. Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, LATS2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. LATS2 is an essential mitotic regulator responsible for coordinating accurate cytokinesis completion and governing the stabilization of other mitotic regulators. It is also critical in the maintenance of proper chromosome number, genomic stability, mitotic fidelity, and the integrity of centrosome duplication. Downregulation of LATS2 is associated with po
Probab=99.94  E-value=2e-26  Score=191.66  Aligned_cols=164  Identities=19%  Similarity=0.236  Sum_probs=116.2

Q ss_pred             CCCCChHHHHHHHHHHHHHHhhhhcCCCCceEecCCCCCceEECCCCCceEeeecceeecCCCCC---------------
Q 041793            4 CKILDWPKRFHIICGTARGVMYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDEI---------------   68 (224)
Q Consensus         4 ~~~l~~~~~~~i~~qi~~~l~~Lh~~~~~~i~H~dl~~~nil~~~~~~~kl~df~~~~~~~~~~~---------------   68 (224)
                      .+.+++..+..++.||+.||.|||+.|   |+||||||+||+++.++.++|+|||++..+.....               
T Consensus        95 ~~~~~e~~~~~~~~qi~~aL~~LH~~g---ivHrDlKp~Nili~~~~~~kL~DFGl~~~~~~~~~~~~~~~~~~~~~~~~  171 (381)
T cd05626          95 MEVFPEVLARFYIAELTLAIESVHKMG---FIHRDIKPDNILIDLDGHIKLTDFGLCTGFRWTHNSKYYQKGSHIRQDSM  171 (381)
T ss_pred             cCCCCHHHHHHHHHHHHHHHHHHHhCC---eeecCCcHHHEEECCCCCEEEeeCcCCccccccccccccccccccccccc
Confidence            456889999999999999999999999   99999999999999999999999998754311000               


Q ss_pred             ------------------------------CCcccccccccccCCcccccCCCcccccceEehhHHHHHHHhcccCCCCc
Q 041793           69 ------------------------------EGNTNRVIGTYGYMAPEYASDGKFSVKSDVFSFGILLLEIISGKKNRGFY  118 (224)
Q Consensus        69 ------------------------------~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~  118 (224)
                                                    ........|+..|+|||.+.+..++.++|||||||++|+|++|..||...
T Consensus       172 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~DiwSlG~il~elltG~~Pf~~~  251 (381)
T cd05626         172 EPSDLWDDVSNCRCGDRLKTLEQRATKQHQRCLAHSLVGTPNYIAPEVLLRKGYTQLCDWWSVGVILFEMLVGQPPFLAP  251 (381)
T ss_pred             CcccccccccccccccccchhhccccccccccccccccCCccccCHHHHcCCCCCCccceeehhhHHHHHHhCCCCCcCC
Confidence                                          00012246889999999998888999999999999999999999998654


Q ss_pred             CCCcccccccccCCCccccCccccCCcCHHHHHHHHHHHHHh--ccCCCCCCCChHHHHHH
Q 041793          119 HSDNKLNLIGHVSMPSQLIDPCIQGSFNLVEVIRCIHIGLLC--VQQHPKDRPSMPSVILM  177 (224)
Q Consensus       119 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~c--l~~dp~~Rps~~~v~~~  177 (224)
                      ........+.........+.   ....+    ..+.+|+.+|  +..++..||++.++++.
T Consensus       252 ~~~~~~~~i~~~~~~~~~~~---~~~~s----~~~~dli~~ll~~~~~~~~R~~~~~~l~h  305 (381)
T cd05626         252 TPTETQLKVINWENTLHIPP---QVKLS----PEAVDLITKLCCSAEERLGRNGADDIKAH  305 (381)
T ss_pred             CHHHHHHHHHccccccCCCC---CCCCC----HHHHHHHHHHccCcccccCCCCHHHHhcC
Confidence            43221111111000001100   00111    2355677674  45556669999999874


No 224
>cd05079 PTKc_Jak1_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinase, Janus kinase 1. Protein Tyrosine Kinase (PTK) family; Janus kinase 1 (Jak1); catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak1 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of signal transducers a
Probab=99.94  E-value=9.5e-27  Score=186.04  Aligned_cols=167  Identities=22%  Similarity=0.315  Sum_probs=120.5

Q ss_pred             CCCChHHHHHHHHHHHHHHhhhhcCCCCceEecCCCCCceEECCCCCceEeeecceeecCCCCCC-CcccccccccccCC
Q 041793            5 KILDWPKRFHIICGTARGVMYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDEIE-GNTNRVIGTYGYMA   83 (224)
Q Consensus         5 ~~l~~~~~~~i~~qi~~~l~~Lh~~~~~~i~H~dl~~~nil~~~~~~~kl~df~~~~~~~~~~~~-~~~~~~~~~~~y~a   83 (224)
                      ..+++.+++.++.||+.||.|||+.|   ++|+||+|+||+++.++.++|+|||++......... .......++..|+|
T Consensus       104 ~~~~~~~~~~i~~~i~~aL~~lH~~g---i~H~dlkp~Nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~y~a  180 (284)
T cd05079         104 NKINLKQQLKYAVQICKGMDYLGSRQ---YVHRDLAARNVLVESEHQVKIGDFGLTKAIETDKEYYTVKDDLDSPVFWYA  180 (284)
T ss_pred             CCCCHHHHHHHHHHHHHHHHHHHHCC---eeecccchheEEEcCCCCEEECCCccccccccCccceeecCCCCCCccccC
Confidence            46899999999999999999999999   999999999999999999999999998865432211 11112345667999


Q ss_pred             cccccCCCcccccceEehhHHHHHHHhcccCCCCcCCCccc------------ccccccCCCccccCccccCCcCHHHHH
Q 041793           84 PEYASDGKFSVKSDVFSFGILLLEIISGKKNRGFYHSDNKL------------NLIGHVSMPSQLIDPCIQGSFNLVEVI  151 (224)
Q Consensus        84 PE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~------------~~~~~~~~~~~~~~~~~~~~~~~~~~~  151 (224)
                      ||.+.+..++.++|+||||+++++++++..|+.........            ........... .  ......    ..
T Consensus       181 pE~~~~~~~~~~~Di~slG~il~ellt~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~--~~~~~~----~~  253 (284)
T cd05079         181 PECLIQSKFYIASDVWSFGVTLYELLTYCDSESSPMTLFLKMIGPTHGQMTVTRLVRVLEEGKR-L--PRPPNC----PE  253 (284)
T ss_pred             HHHhccCCCCccccchhhhhhhhhhhcCCCCCccccchhhhhcccccccccHHHHHHHHHcCcc-C--CCCCCC----CH
Confidence            99998888899999999999999999976553211000000            00000000000 0  001111    23


Q ss_pred             HHHHHHHHhccCCCCCCCChHHHHHHhccC
Q 041793          152 RCIHIGLLCVQQHPKDRPSMPSVILMLGSE  181 (224)
Q Consensus       152 ~~~~li~~cl~~dp~~Rps~~~v~~~L~~~  181 (224)
                      .+.+|+.+||+.+|++||++.++++.|+..
T Consensus       254 ~~~~li~~~l~~~p~~Rpt~~~il~~l~~~  283 (284)
T cd05079         254 EVYQLMRKCWEFQPSKRTTFQNLIEGFEAI  283 (284)
T ss_pred             HHHHHHHHHccCCcccCcCHHHHHHHHHhh
Confidence            577899999999999999999999998754


No 225
>cd05046 PTK_CCK4 Pseudokinase domain of the Protein Tyrosine Kinase, Colon Carcinoma Kinase 4. Protein Tyrosine Kinase (PTK) family; Colon Carcinoma Kinase 4 (CCK4); pseudokinase domain. The PTKc (catalytic domain) family, to which this subfamily belongs, includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. CCK4, also called protein tyrosine kinase 7 (PTK7), is an orphan receptor tyr kinase (RTK) containing an extracellular region with seven immunoglobulin domains, a transmembrane segment, and an intracellular inactive pseudokinase domain. Studies in mice reveal that CCK4 is essential for neural development. Mouse embryos containing a truncated CCK4 die perinatally and display craniorachischisis, a severe form of neural tube defect. The mechanism of action of the CCK4 pseudokinase is s
Probab=99.94  E-value=1.6e-26  Score=183.67  Aligned_cols=161  Identities=26%  Similarity=0.380  Sum_probs=120.5

Q ss_pred             CCChHHHHHHHHHHHHHHhhhhcCCCCceEecCCCCCceEECCCCCceEeeecceeecCCCCCCCcccccccccccCCcc
Q 041793            6 ILDWPKRFHIICGTARGVMYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDEIEGNTNRVIGTYGYMAPE   85 (224)
Q Consensus         6 ~l~~~~~~~i~~qi~~~l~~Lh~~~~~~i~H~dl~~~nil~~~~~~~kl~df~~~~~~~~~~~~~~~~~~~~~~~y~aPE   85 (224)
                      .+++.+++.++.||+.||.|||+.+   |+|+||+|+||+++.++.++++|||++......... ......++..|++||
T Consensus       113 ~l~~~~~~~~~~~l~~~l~~LH~~~---i~H~dlkp~Nili~~~~~~~l~~~~~~~~~~~~~~~-~~~~~~~~~~y~~PE  188 (275)
T cd05046         113 PLSTKQKVALCTQIALGMDHLSNAR---FVHRDLAARNCLVSSQREVKVSLLSLSKDVYNSEYY-KLRNALIPLRWLAPE  188 (275)
T ss_pred             CCCHHHHHHHHHHHHHHHHHhhhcC---cccCcCccceEEEeCCCcEEEcccccccccCccccc-ccCCceeEEeecChh
Confidence            6899999999999999999999999   999999999999999999999999998654322111 112234566799999


Q ss_pred             cccCCCcccccceEehhHHHHHHHh-cccCCCCcCCCcccccccccCCCccccCccccCCcCHHHHHHHHHHHHHhccCC
Q 041793           86 YASDGKFSVKSDVFSFGILLLEIIS-GKKNRGFYHSDNKLNLIGHVSMPSQLIDPCIQGSFNLVEVIRCIHIGLLCVQQH  164 (224)
Q Consensus        86 ~~~~~~~~~~~Di~slG~il~~l~~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~d  164 (224)
                      .+.+..++.++|+||||++++++++ |..||....................     .....+    ..+.+++.+||+.+
T Consensus       189 ~~~~~~~~~~~Di~slG~~l~~l~~~~~~p~~~~~~~~~~~~~~~~~~~~~-----~~~~~~----~~l~~~i~~~l~~~  259 (275)
T cd05046         189 AVQEDDFSTKSDVWSFGVLMWEVFTQGELPFYGLSDEEVLNRLQAGKLELP-----VPEGCP----SRLYKLMTRCWAVN  259 (275)
T ss_pred             hhccCCCCchhhHHHHHHHHHHHHhCCCCCccccchHHHHHHHHcCCcCCC-----CCCCCC----HHHHHHHHHHcCCC
Confidence            9888888899999999999999998 7778754332221111111010000     011111    24678999999999


Q ss_pred             CCCCCChHHHHHHhc
Q 041793          165 PKDRPSMPSVILMLG  179 (224)
Q Consensus       165 p~~Rps~~~v~~~L~  179 (224)
                      |++||++.++++.|.
T Consensus       260 p~~Rp~~~~~l~~l~  274 (275)
T cd05046         260 PKDRPSFSELVSALG  274 (275)
T ss_pred             cccCCCHHHHHHHhc
Confidence            999999999999885


No 226
>cd06609 STKc_MST3_like Catalytic domain of Mammalian Ste20-like protein kinase 3-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 3 (MST3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST3, MST4, STK25, Schizosaccharomyces pombe Nak1 and Sid1, Saccharomyces cerevisiae sporulation-specific protein 1 (SPS1), and related proteins. Nak1 is required by fission yeast for polarizing the tips of actin cytoskeleton and is involved in cell growth, cell separation, cell morphology and cell-cycle progression. Sid1 is a component in the septation initiation network (SIN)
Probab=99.94  E-value=1.1e-26  Score=184.55  Aligned_cols=158  Identities=30%  Similarity=0.464  Sum_probs=121.6

Q ss_pred             CCChHHHHHHHHHHHHHHhhhhcCCCCceEecCCCCCceEECCCCCceEeeecceeecCCCCCCCcccccccccccCCcc
Q 041793            6 ILDWPKRFHIICGTARGVMYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDEIEGNTNRVIGTYGYMAPE   85 (224)
Q Consensus         6 ~l~~~~~~~i~~qi~~~l~~Lh~~~~~~i~H~dl~~~nil~~~~~~~kl~df~~~~~~~~~~~~~~~~~~~~~~~y~aPE   85 (224)
                      .+++.+++.++.|++.||.|||+.+   ++|+||+|+||+++.++.++++|||++........  ......++..|++||
T Consensus        94 ~~~~~~~~~~~~ql~~~l~~lh~~~---i~h~dl~p~ni~i~~~~~~~l~d~g~~~~~~~~~~--~~~~~~~~~~y~~PE  168 (274)
T cd06609          94 KLDETYIAFILREVLLGLEYLHEEG---KIHRDIKAANILLSEEGDVKLADFGVSGQLTSTMS--KRNTFVGTPFWMAPE  168 (274)
T ss_pred             CCCHHHHHHHHHHHHHHHHHHHhCC---cccCCCCHHHEEECCCCCEEEcccccceeeccccc--ccccccCCccccChh
Confidence            7899999999999999999999999   99999999999999999999999999987654321  122345677899999


Q ss_pred             cccCCCcccccceEehhHHHHHHHhcccCCCCcCCCcccccccccCCCccccCccccCCcCHHHHHHHHHHHHHhccCCC
Q 041793           86 YASDGKFSVKSDVFSFGILLLEIISGKKNRGFYHSDNKLNLIGHVSMPSQLIDPCIQGSFNLVEVIRCIHIGLLCVQQHP  165 (224)
Q Consensus        86 ~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dp  165 (224)
                      .+.+..++.++|+||||+++|++++|..||...........+....      .+......   ....+.+++.+||..||
T Consensus       169 ~~~~~~~~~~sDv~slG~il~~l~tg~~p~~~~~~~~~~~~~~~~~------~~~~~~~~---~~~~~~~~l~~~l~~~p  239 (274)
T cd06609         169 VIKQSGYDEKADIWSLGITAIELAKGEPPLSDLHPMRVLFLIPKNN------PPSLEGNK---FSKPFKDFVSLCLNKDP  239 (274)
T ss_pred             hhccCCCCchhhHHHHHHHHHHHHhCCCCcccCchHHHHHHhhhcC------CCCCcccc---cCHHHHHHHHHHhhCCh
Confidence            9988889999999999999999999999986443221111111110      11111110   11246678899999999


Q ss_pred             CCCCChHHHHHH
Q 041793          166 KDRPSMPSVILM  177 (224)
Q Consensus       166 ~~Rps~~~v~~~  177 (224)
                      ++||+++++++.
T Consensus       240 ~~Rpt~~~il~~  251 (274)
T cd06609         240 KERPSAKELLKH  251 (274)
T ss_pred             hhCcCHHHHhhC
Confidence            999999999763


No 227
>cd07839 STKc_CDK5 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 5. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 5 (CDK5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK5 is unusual in that it is regulated by non-cyclin proteins, p35 and p39. It is highly expressed in the nervous system and is critical in normal neural development and function. It plays a role in neuronal migration and differentiation, and is also
Probab=99.94  E-value=7.3e-27  Score=186.51  Aligned_cols=168  Identities=21%  Similarity=0.248  Sum_probs=117.2

Q ss_pred             CCCCChHHHHHHHHHHHHHHhhhhcCCCCceEecCCCCCceEECCCCCceEeeecceeecCCCCCCCcccccccccccCC
Q 041793            4 CKILDWPKRFHIICGTARGVMYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDEIEGNTNRVIGTYGYMA   83 (224)
Q Consensus         4 ~~~l~~~~~~~i~~qi~~~l~~Lh~~~~~~i~H~dl~~~nil~~~~~~~kl~df~~~~~~~~~~~~~~~~~~~~~~~y~a   83 (224)
                      .+.+++.+++.++.||+.||.|||+.+   ++|+||+|+||+++.++.++|+|||++........  ......++..|+|
T Consensus        93 ~~~~~~~~~~~~~~qi~~al~~LH~~~---i~H~dl~~~nil~~~~~~~~l~dfg~~~~~~~~~~--~~~~~~~~~~y~a  167 (284)
T cd07839          93 NGDIDPEIVKSFMFQLLKGLAFCHSHN---VLHRDLKPQNLLINKNGELKLADFGLARAFGIPVR--CYSAEVVTLWYRP  167 (284)
T ss_pred             CCCCCHHHHHHHHHHHHHHHHHHHHCC---EecCCCCHHHEEEcCCCcEEECccchhhccCCCCC--CcCCCccccCCcC
Confidence            467899999999999999999999999   99999999999999999999999999876533211  1122345778999


Q ss_pred             cccccCCC-cccccceEehhHHHHHHHhcccCCCCcCCCcc-cc-ccccc------------CCCccccCccccCCcC--
Q 041793           84 PEYASDGK-FSVKSDVFSFGILLLEIISGKKNRGFYHSDNK-LN-LIGHV------------SMPSQLIDPCIQGSFN--  146 (224)
Q Consensus        84 PE~~~~~~-~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~-~~-~~~~~------------~~~~~~~~~~~~~~~~--  146 (224)
                      ||.+.+.. ++.++|+||||+++++|++|+.|+........ .. +....            ..+.....+.......  
T Consensus       168 PE~~~~~~~~~~~~DiwslG~il~~l~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  247 (284)
T cd07839         168 PDVLFGAKLYSTSIDMWSAGCIFAELANAGRPLFPGNDVDDQLKRIFRLLGTPTEESWPGVSKLPDYKPYPMYPATTSLV  247 (284)
T ss_pred             hHHHhCCcccCcHHHHHHHHHHHHHHHhcCCCCcCCCCHHHHHHHHHHHhCCCChHHhHHhhhcccccccCCCCCcchhh
Confidence            99887644 68999999999999999999988632221100 00 00000            0000000000000000  


Q ss_pred             ---HHHHHHHHHHHHHhccCCCCCCCChHHHHH
Q 041793          147 ---LVEVIRCIHIGLLCVQQHPKDRPSMPSVIL  176 (224)
Q Consensus       147 ---~~~~~~~~~li~~cl~~dp~~Rps~~~v~~  176 (224)
                         ......+.+++.+||+.||.+|||++++++
T Consensus       248 ~~~~~~~~~~~~li~~~l~~~P~~R~t~~~il~  280 (284)
T cd07839         248 NVVPKLNSTGRDLLQNLLVCNPVQRISAEEALQ  280 (284)
T ss_pred             hhcccCCHHHHHHHHHHhcCChhhcCCHHHHhc
Confidence               001134568999999999999999999975


No 228
>cd05076 PTK_Tyk2_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinase, Tyrosine kinase 2. Protein Tyrosine Kinase (PTK) family; Tyrosine kinase 2 (Tyk2); pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyk2 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity of the C-terminal catalyt
Probab=99.94  E-value=1.3e-26  Score=184.62  Aligned_cols=155  Identities=21%  Similarity=0.269  Sum_probs=115.1

Q ss_pred             CCCCChHHHHHHHHHHHHHHhhhhcCCCCceEecCCCCCceEECCCC-------CceEeeecceeecCCCCCCCcccccc
Q 041793            4 CKILDWPKRFHIICGTARGVMYLHQDSRLRIIHRDLKASNVLLDQDM-------NPKISDFGLARAFGGDEIEGNTNRVI   76 (224)
Q Consensus         4 ~~~l~~~~~~~i~~qi~~~l~~Lh~~~~~~i~H~dl~~~nil~~~~~-------~~kl~df~~~~~~~~~~~~~~~~~~~   76 (224)
                      .+.+++..++.++.||+.||.|||+++   |+||||||.||+++..+       .++++|||++......      ....
T Consensus       111 ~~~~~~~~~~~i~~qi~~~l~~lH~~~---iiH~dlkp~Nill~~~~~~~~~~~~~kl~d~g~~~~~~~~------~~~~  181 (274)
T cd05076         111 KGRVPVAWKITVAQQLASALSYLEDKN---LVHGNVCAKNILLARLGLAEGTSPFIKLSDPGVSFTALSR------EERV  181 (274)
T ss_pred             CCCCCHHHHHHHHHHHHHHHHHHHcCC---ccCCCCCcccEEEeccCcccCccceeeecCCccccccccc------cccc
Confidence            467899999999999999999999999   99999999999997543       3799999987543211      1124


Q ss_pred             cccccCCcccccC-CCcccccceEehhHHHHHHH-hcccCCCCcCCCcccccccccCCCccccCccccCCcCHHHHHHHH
Q 041793           77 GTYGYMAPEYASD-GKFSVKSDVFSFGILLLEII-SGKKNRGFYHSDNKLNLIGHVSMPSQLIDPCIQGSFNLVEVIRCI  154 (224)
Q Consensus        77 ~~~~y~aPE~~~~-~~~~~~~Di~slG~il~~l~-~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  154 (224)
                      ++..|+|||.+.+ ..++.++|+||||+++|+++ +|+.||..............   ....+     ...    ...+.
T Consensus       182 ~~~~~~aPe~~~~~~~~~~~~Dv~slG~~l~el~~~g~~p~~~~~~~~~~~~~~~---~~~~~-----~~~----~~~~~  249 (274)
T cd05076         182 ERIPWIAPECVPGGNSLSTAADKWSFGTTLLEICFDGEVPLKERTPSEKERFYEK---KHRLP-----EPS----CKELA  249 (274)
T ss_pred             cCCcccCchhhcCCCCCCcHHHHHHHHHHHHHHHhCCCCCccccChHHHHHHHHh---ccCCC-----CCC----ChHHH
Confidence            5678999998865 45789999999999999985 68888754332221111110   00111     111    12467


Q ss_pred             HHHHHhccCCCCCCCChHHHHHHhc
Q 041793          155 HIGLLCVQQHPKDRPSMPSVILMLG  179 (224)
Q Consensus       155 ~li~~cl~~dp~~Rps~~~v~~~L~  179 (224)
                      ++|.+||+.+|++|||+.+|++.|.
T Consensus       250 ~li~~cl~~~p~~Rps~~~il~~L~  274 (274)
T cd05076         250 TLISQCLTYEPTQRPSFRTILRDLT  274 (274)
T ss_pred             HHHHHHcccChhhCcCHHHHHHhhC
Confidence            8899999999999999999998873


No 229
>cd06613 STKc_MAP4K3_like Catalytic domain of Mitogen-activated protein kinase kinase kinase kinase-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 3 (MAPKKKK3 or MAP4K3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily includes MAP4K3, MAP4K1, MAP4K2, MAP4K5, and related proteins. Vertebrate members contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activ
Probab=99.94  E-value=6.3e-27  Score=184.51  Aligned_cols=162  Identities=27%  Similarity=0.369  Sum_probs=121.3

Q ss_pred             CCCCChHHHHHHHHHHHHHHhhhhcCCCCceEecCCCCCceEECCCCCceEeeecceeecCCCCCCCcccccccccccCC
Q 041793            4 CKILDWPKRFHIICGTARGVMYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDEIEGNTNRVIGTYGYMA   83 (224)
Q Consensus         4 ~~~l~~~~~~~i~~qi~~~l~~Lh~~~~~~i~H~dl~~~nil~~~~~~~kl~df~~~~~~~~~~~~~~~~~~~~~~~y~a   83 (224)
                      +..+++.+++.++.|++.||.|||+.+   ++|+||+|+||+++.++.++++|||++........  ......++..|++
T Consensus        95 ~~~l~~~~~~~~~~ql~~~l~~lh~~~---i~h~dl~p~ni~i~~~~~~~l~d~g~~~~~~~~~~--~~~~~~~~~~y~~  169 (262)
T cd06613          95 RGPLSELQIAYVCRETLKGLAYLHETG---KIHRDIKGANILLTEDGDVKLADFGVSAQLTATIA--KRKSFIGTPYWMA  169 (262)
T ss_pred             ccCCCHHHHHHHHHHHHHHHHHHHhCC---ceecCCChhhEEECCCCCEEECccccchhhhhhhh--ccccccCCccccC
Confidence            367899999999999999999999999   99999999999999999999999999876543211  1122356778999


Q ss_pred             cccccCC---CcccccceEehhHHHHHHHhcccCCCCcCCCcccccccccCCCccccCccccCCcCHHHHHHHHHHHHHh
Q 041793           84 PEYASDG---KFSVKSDVFSFGILLLEIISGKKNRGFYHSDNKLNLIGHVSMPSQLIDPCIQGSFNLVEVIRCIHIGLLC  160 (224)
Q Consensus        84 PE~~~~~---~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~c  160 (224)
                      ||.+.+.   .++.++|+||||+++++|++|+.||..................    .....  ........+.+++.+|
T Consensus       170 Pe~~~~~~~~~~~~~~Di~slG~~l~~~~tg~~p~~~~~~~~~~~~~~~~~~~----~~~~~--~~~~~~~~~~~li~~~  243 (262)
T cd06613         170 PEVAAVERKGGYDGKCDIWALGITAIELAELQPPMFDLHPMRALFLISKSNFP----PPKLK--DKEKWSPVFHDFIKKC  243 (262)
T ss_pred             chhhcccccCCcCchhhhHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhccCC----Ccccc--chhhhhHHHHHHHHHH
Confidence            9998766   7889999999999999999999998654322221111111000    01111  1112234577899999


Q ss_pred             ccCCCCCCCChHHHHH
Q 041793          161 VQQHPKDRPSMPSVIL  176 (224)
Q Consensus       161 l~~dp~~Rps~~~v~~  176 (224)
                      |+.+|..|||+.+|+.
T Consensus       244 l~~~p~~Rpt~~~il~  259 (262)
T cd06613         244 LTKDPKKRPTATKLLQ  259 (262)
T ss_pred             cCCChhhCCCHHHHhc
Confidence            9999999999999874


No 230
>cd07847 STKc_CDKL1_4 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase Like 1 and 4. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 1 (CDKL1) and CDKL4 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL1 and CDKL4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKL1, also called p42 KKIALRE, is a glial protein that is upregulated in gliosis. It is present in neuroblastoma and A431 human carcinoma cells, and may be implicated in neoplastic transformation. The functio
Probab=99.94  E-value=1.7e-26  Score=184.32  Aligned_cols=168  Identities=24%  Similarity=0.302  Sum_probs=120.2

Q ss_pred             CCCCChHHHHHHHHHHHHHHhhhhcCCCCceEecCCCCCceEECCCCCceEeeecceeecCCCCCCCcccccccccccCC
Q 041793            4 CKILDWPKRFHIICGTARGVMYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDEIEGNTNRVIGTYGYMA   83 (224)
Q Consensus         4 ~~~l~~~~~~~i~~qi~~~l~~Lh~~~~~~i~H~dl~~~nil~~~~~~~kl~df~~~~~~~~~~~~~~~~~~~~~~~y~a   83 (224)
                      ...+++.+++.++.||+.||.|||+.+   ++|+||+|.||+++.++.++|+|||++........  ......++..|++
T Consensus        94 ~~~~~~~~~~~~~~ql~~~l~~LH~~~---i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~~~~--~~~~~~~~~~~~a  168 (286)
T cd07847          94 PRGVPEHLIKKIIWQTLQAVNFCHKHN---CIHRDVKPENILITKQGQIKLCDFGFARILTGPGD--DYTDYVATRWYRA  168 (286)
T ss_pred             CCCCCHHHHHHHHHHHHHHHHHHHHCC---ceecCCChhhEEEcCCCcEEECccccceecCCCcc--cccCcccccccCC
Confidence            456899999999999999999999999   99999999999999999999999999987543221  1122345678999


Q ss_pred             cccccC-CCcccccceEehhHHHHHHHhcccCCCCcCCCcccccccc----c-----------CCCccccCccccCCcCH
Q 041793           84 PEYASD-GKFSVKSDVFSFGILLLEIISGKKNRGFYHSDNKLNLIGH----V-----------SMPSQLIDPCIQGSFNL  147 (224)
Q Consensus        84 PE~~~~-~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~----~-----------~~~~~~~~~~~~~~~~~  147 (224)
                      ||.+.+ ..++.++|+||||+++++|++|+.||......+....+..    .           ........+........
T Consensus       169 PE~~~~~~~~~~~~Di~slG~i~~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  248 (286)
T cd07847         169 PELLVGDTQYGPPVDVWAIGCVFAELLTGQPLWPGKSDVDQLYLIRKTLGDLIPRHQQIFSTNQFFKGLSIPEPETREPL  248 (286)
T ss_pred             HHHHhCCCCcCchhhhHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCChHHhhhcccccccccccCCCcccccCH
Confidence            999876 4578899999999999999999999865433221111100    0           00000000000101111


Q ss_pred             HH-----HHHHHHHHHHhccCCCCCCCChHHHHH
Q 041793          148 VE-----VIRCIHIGLLCVQQHPKDRPSMPSVIL  176 (224)
Q Consensus       148 ~~-----~~~~~~li~~cl~~dp~~Rps~~~v~~  176 (224)
                      ..     ...+.+|+.+||+.||++||++.+++.
T Consensus       249 ~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~eil~  282 (286)
T cd07847         249 ESKFPNISSPALSFLKGCLQMDPTERLSCEELLE  282 (286)
T ss_pred             HHHhccCCHHHHHHHHHHhcCCccccCCHHHHhc
Confidence            10     235678999999999999999999865


No 231
>cd05066 PTKc_EphR_A Catalytic domain of the Protein Tyrosine Kinases, Class EphA Ephrin Receptors. Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; most class EphA receptors including EphA3, EphA4, EphA5, and EphA7, but excluding EphA1, EphA2 and EphA10; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. One exception is EphA4, which also binds ephrins-B2/B3. EphRs contain an ephrin-binding domain and two fibronectin repeats extracellul
Probab=99.94  E-value=1.3e-26  Score=183.68  Aligned_cols=165  Identities=26%  Similarity=0.376  Sum_probs=123.1

Q ss_pred             CCCCChHHHHHHHHHHHHHHhhhhcCCCCceEecCCCCCceEECCCCCceEeeecceeecCCCCCCCcc-cccccccccC
Q 041793            4 CKILDWPKRFHIICGTARGVMYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDEIEGNT-NRVIGTYGYM   82 (224)
Q Consensus         4 ~~~l~~~~~~~i~~qi~~~l~~Lh~~~~~~i~H~dl~~~nil~~~~~~~kl~df~~~~~~~~~~~~~~~-~~~~~~~~y~   82 (224)
                      .+.+++.+++.++.|++.||.|||+.+   ++|+||+|+||+++.++.++++|||++............ .....+..|+
T Consensus       100 ~~~~~~~~~~~i~~~i~~~l~~lH~~~---i~h~dlkp~nili~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~y~  176 (267)
T cd05066         100 DGQFTVIQLVGMLRGIASGMKYLSDMG---YVHRDLAARNILVNSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWT  176 (267)
T ss_pred             CCCCCHHHHHHHHHHHHHHHHHHHHCC---EeehhhchhcEEECCCCeEEeCCCCcccccccccceeeecCCCccceeec
Confidence            356899999999999999999999999   999999999999999999999999999876433211111 1112245799


Q ss_pred             CcccccCCCcccccceEehhHHHHHHHh-cccCCCCcCCCcccccccccCCCccccCccccCCcCHHHHHHHHHHHHHhc
Q 041793           83 APEYASDGKFSVKSDVFSFGILLLEIIS-GKKNRGFYHSDNKLNLIGHVSMPSQLIDPCIQGSFNLVEVIRCIHIGLLCV  161 (224)
Q Consensus        83 aPE~~~~~~~~~~~Di~slG~il~~l~~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl  161 (224)
                      +||.+.+..++.++|+||||++++++++ |..||...........+....   ....   ....    ...+.+++.+||
T Consensus       177 ~pe~~~~~~~~~~~Dv~slG~~l~ell~~g~~p~~~~~~~~~~~~~~~~~---~~~~---~~~~----~~~~~~li~~~l  246 (267)
T cd05066         177 APEAIAYRKFTSASDVWSYGIVMWEVMSYGERPYWEMSNQDVIKAIEEGY---RLPA---PMDC----PAALHQLMLDCW  246 (267)
T ss_pred             CHhHhccCccCchhhhHHHHHHHHHHhcCCCCCcccCCHHHHHHHHhCCC---cCCC---CCCC----CHHHHHHHHHHc
Confidence            9999988889999999999999999886 999875443222211111110   1000   0111    124568899999


Q ss_pred             cCCCCCCCChHHHHHHhccC
Q 041793          162 QQHPKDRPSMPSVILMLGSE  181 (224)
Q Consensus       162 ~~dp~~Rps~~~v~~~L~~~  181 (224)
                      +.+|++||++.++++.|+..
T Consensus       247 ~~~p~~Rp~~~~i~~~l~~~  266 (267)
T cd05066         247 QKDRNERPKFEQIVSILDKL  266 (267)
T ss_pred             ccCchhCCCHHHHHHHHHhh
Confidence            99999999999999998753


No 232
>cd05038 PTKc_Jak_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases. Protein Tyrosine Kinase (PTK) family; Janus kinase (Jak) subfamily; catalytic (c) domain (repeat 2). The Jak subfamily is composed of Jak1, Jak2, Jak3, TYK2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Most Jaks are expressed in a wide variety of tissues, except for Jak3, which is expressed only in hematopoietic cells. Jaks are crucial for cytokine receptor signaling. They are activated by aut
Probab=99.94  E-value=1e-26  Score=185.34  Aligned_cols=169  Identities=26%  Similarity=0.332  Sum_probs=121.9

Q ss_pred             CCChHHHHHHHHHHHHHHhhhhcCCCCceEecCCCCCceEECCCCCceEeeecceeecCCCCCCC-cccccccccccCCc
Q 041793            6 ILDWPKRFHIICGTARGVMYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDEIEG-NTNRVIGTYGYMAP   84 (224)
Q Consensus         6 ~l~~~~~~~i~~qi~~~l~~Lh~~~~~~i~H~dl~~~nil~~~~~~~kl~df~~~~~~~~~~~~~-~~~~~~~~~~y~aP   84 (224)
                      .+++.+++.++.|++.||.|||+.|   ++|+||+|+||+++.++.++++|||.+.......... ......++..|++|
T Consensus       105 ~~~~~~~~~~~~~l~~aL~~lH~~~---i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~P  181 (284)
T cd05038         105 QINLKRLLLFSSQICKGMDYLGSQR---YIHRDLAARNILVESEDLVKISDFGLAKVLPEDKDYYYVKEPGESPIFWYAP  181 (284)
T ss_pred             ccCHHHHHHHHHHHHHHHHHHHhCC---eecCCCCHHhEEEcCCCCEEEcccccccccccCCcceeccCCCCCcccccCc
Confidence            5899999999999999999999999   9999999999999999999999999998764221111 11112334569999


Q ss_pred             ccccCCCcccccceEehhHHHHHHHhcccCCCCcCCCcccc--------ccccc-CCCccccCccccCCcCHHHHHHHHH
Q 041793           85 EYASDGKFSVKSDVFSFGILLLEIISGKKNRGFYHSDNKLN--------LIGHV-SMPSQLIDPCIQGSFNLVEVIRCIH  155 (224)
Q Consensus        85 E~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~--------~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~  155 (224)
                      |.+.+..++.++|+||||+++++|++|..|+..........        ..... ...............    ...+.+
T Consensus       182 e~~~~~~~~~~~Di~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~  257 (284)
T cd05038         182 ECLRTSKFSSASDVWSFGVTLYELFTYGDPSQSPPAEFLRMIGIAQGQMIVTRLLELLKEGERLPRPPSC----PDEVYD  257 (284)
T ss_pred             HHHccCCCCcccchHHHhhhhheeeccCCCcccccchhccccccccccccHHHHHHHHHcCCcCCCCccC----CHHHHH
Confidence            99988888999999999999999999998875422211000        00000 000000000000111    135778


Q ss_pred             HHHHhccCCCCCCCChHHHHHHhccC
Q 041793          156 IGLLCVQQHPKDRPSMPSVILMLGSE  181 (224)
Q Consensus       156 li~~cl~~dp~~Rps~~~v~~~L~~~  181 (224)
                      ++.+||+.+|++||++.+|++.|+..
T Consensus       258 li~~cl~~~p~~Rpt~~ei~~~l~~i  283 (284)
T cd05038         258 LMKLCWEAEPQDRPSFADLILIVDRL  283 (284)
T ss_pred             HHHHHhccChhhCCCHHHHHHHHhhc
Confidence            99999999999999999999999754


No 233
>cd07850 STKc_JNK Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase. Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase (JNK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. They are also essential regulators of physiological and pathological processes and are involved in the pathogenesis of several diseases such as diabetes, atherosclerosis, stroke, Parkinson's and Alzheimer's. Vetebrates harbor three different JNK
Probab=99.94  E-value=1.6e-26  Score=190.35  Aligned_cols=166  Identities=27%  Similarity=0.335  Sum_probs=120.0

Q ss_pred             CCChHHHHHHHHHHHHHHhhhhcCCCCceEecCCCCCceEECCCCCceEeeecceeecCCCCCCCcccccccccccCCcc
Q 041793            6 ILDWPKRFHIICGTARGVMYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDEIEGNTNRVIGTYGYMAPE   85 (224)
Q Consensus         6 ~l~~~~~~~i~~qi~~~l~~Lh~~~~~~i~H~dl~~~nil~~~~~~~kl~df~~~~~~~~~~~~~~~~~~~~~~~y~aPE   85 (224)
                      .++..++..++.|++.||+|||+.|   ++|+||||+||+++.++.++|+|||++........   .....++..|+|||
T Consensus       114 ~l~~~~~~~~~~ql~~aL~~LH~~g---i~H~dlkp~Nil~~~~~~~kL~Dfg~~~~~~~~~~---~~~~~~~~~y~aPE  187 (353)
T cd07850         114 DLDHERMSYLLYQMLCGIKHLHSAG---IIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFM---MTPYVVTRYYRAPE  187 (353)
T ss_pred             cCCHHHHHHHHHHHHHHHHHHHhCC---eeeCCCCHHHEEECCCCCEEEccCccceeCCCCCC---CCCCcccccccCHH
Confidence            3788899999999999999999999   99999999999999999999999999986543221   22235677899999


Q ss_pred             cccCCCcccccceEehhHHHHHHHhcccCCCCcCCCcccc-cccccCCC-------------------c--------ccc
Q 041793           86 YASDGKFSVKSDVFSFGILLLEIISGKKNRGFYHSDNKLN-LIGHVSMP-------------------S--------QLI  137 (224)
Q Consensus        86 ~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~-~~~~~~~~-------------------~--------~~~  137 (224)
                      .+.+..++.++|+|||||++++|++|+.||.......... +......+                   .        ...
T Consensus       188 ~~~~~~~~~~~DvwslG~~l~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  267 (353)
T cd07850         188 VILGMGYKENVDIWSVGCIMGEMIRGTVLFPGTDHIDQWNKIIEQLGTPSDEFMSRLQPTVRNYVENRPKYAGYSFEELF  267 (353)
T ss_pred             HHhCCCCCCchhhHhHHHHHHHHHHCCCCCCCCCHHHHHHHHHHhcCCCCHHHHHHhhhhhhHHhhcCCCCCCcchhhhC
Confidence            9999889999999999999999999999986433111000 00000000                   0        000


Q ss_pred             Ccc-cc---CCcCHHHHHHHHHHHHHhccCCCCCCCChHHHHHH
Q 041793          138 DPC-IQ---GSFNLVEVIRCIHIGLLCVQQHPKDRPSMPSVILM  177 (224)
Q Consensus       138 ~~~-~~---~~~~~~~~~~~~~li~~cl~~dp~~Rps~~~v~~~  177 (224)
                      ... ..   ..........+.+++.+||+.||++|||+.++++.
T Consensus       268 ~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~eiL~~  311 (353)
T cd07850         268 PDVLFPPDSESHNKLKASQARDLLSKMLVIDPEKRISVDDALQH  311 (353)
T ss_pred             cccccCcccccccccchhHHHHHHHHHcCCChhhCcCHHHHhcC
Confidence            000 00   00011123346789999999999999999999864


No 234
>cd07861 STKc_CDK1_euk Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 1 from higher eukaryotes-like. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 1 (CDK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK1 from higher eukaryotes. CDK1 is also called Cell division control protein 2 (Cdc2) or p34 protein kinase, and is regulated by cyclins A, B, and E. The CDK1/cyclin A complex controls G2
Probab=99.94  E-value=7.6e-27  Score=186.39  Aligned_cols=164  Identities=23%  Similarity=0.274  Sum_probs=117.1

Q ss_pred             CCCCChHHHHHHHHHHHHHHhhhhcCCCCceEecCCCCCceEECCCCCceEeeecceeecCCCCCCCcccccccccccCC
Q 041793            4 CKILDWPKRFHIICGTARGVMYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDEIEGNTNRVIGTYGYMA   83 (224)
Q Consensus         4 ~~~l~~~~~~~i~~qi~~~l~~Lh~~~~~~i~H~dl~~~nil~~~~~~~kl~df~~~~~~~~~~~~~~~~~~~~~~~y~a   83 (224)
                      .+.+++.+++.++.||+.||.|||+.+   ++|+||+|+||+++.++.++|+|||++.......  .......++..|+|
T Consensus        95 ~~~~~~~~~~~~~~qi~~~L~~lH~~~---i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~~~--~~~~~~~~~~~y~a  169 (285)
T cd07861          95 GQYMDAELVKSYLYQILQGILFCHSRR---VLHRDLKPQNLLIDNKGVIKLADFGLARAFGIPV--RVYTHEVVTLWYRA  169 (285)
T ss_pred             CCcCCHHHHHHHHHHHHHHHHHHHhCC---eeecCCCHHHEEEcCCCcEEECcccceeecCCCc--ccccCCcccccccC
Confidence            367899999999999999999999999   9999999999999999999999999987653221  11122345778999


Q ss_pred             cccccCC-CcccccceEehhHHHHHHHhcccCCCCcCCCccccc-ccccCCC---------------cc---ccCcc---
Q 041793           84 PEYASDG-KFSVKSDVFSFGILLLEIISGKKNRGFYHSDNKLNL-IGHVSMP---------------SQ---LIDPC---  140 (224)
Q Consensus        84 PE~~~~~-~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~-~~~~~~~---------------~~---~~~~~---  140 (224)
                      ||.+.+. .++.++|+||||+++++|++|+.||........... ......+               ..   .....   
T Consensus       170 PE~~~~~~~~~~~~Dv~slG~il~~l~tg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  249 (285)
T cd07861         170 PEVLLGSPRYSTPVDIWSIGTIFAEMATKKPLFHGDSEIDQLFRIFRILGTPTEDVWPGVTSLPDYKNTFPKWKKGSLRS  249 (285)
T ss_pred             hHHhcCCCCcCcHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHhCCCChhhhhcchhhHHHHhhccccCcchhHH
Confidence            9988654 468899999999999999999999864322111000 0000000               00   00000   


Q ss_pred             ccCCcCHHHHHHHHHHHHHhccCCCCCCCChHHHHH
Q 041793          141 IQGSFNLVEVIRCIHIGLLCVQQHPKDRPSMPSVIL  176 (224)
Q Consensus       141 ~~~~~~~~~~~~~~~li~~cl~~dp~~Rps~~~v~~  176 (224)
                      .....    ...+.++|.+||+.||++|||+.+|+.
T Consensus       250 ~~~~~----~~~~~~li~~~l~~dP~~Rpt~~~ll~  281 (285)
T cd07861         250 AVKNL----DEDGLDLLEKMLIYDPAKRISAKKALN  281 (285)
T ss_pred             hcCCC----CHHHHHHHHHHhcCChhhCCCHHHHhc
Confidence            00001    124568999999999999999999865


No 235
>KOG0605 consensus NDR and related serine/threonine kinases [General function prediction only]
Probab=99.94  E-value=4.4e-27  Score=193.00  Aligned_cols=163  Identities=21%  Similarity=0.278  Sum_probs=121.8

Q ss_pred             CCCCCChHHHHHHHHHHHHHHhhhhcCCCCceEecCCCCCceEECCCCCceEeeecceeecCC-----------------
Q 041793            3 RCKILDWPKRFHIICGTARGVMYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGG-----------------   65 (224)
Q Consensus         3 ~~~~l~~~~~~~i~~qi~~~l~~Lh~~~~~~i~H~dl~~~nil~~~~~~~kl~df~~~~~~~~-----------------   65 (224)
                      +.+.|++.....++.+++.||..+|+.|   ++||||||+|+|+|..|++||+|||++..+..                 
T Consensus       234 ~~~~L~e~~arfYiaE~vlAI~~iH~~g---yIHRDIKPdNlLiD~~GHiKLSDFGLs~gl~~~~~~~~~~~~~~~~~~~  310 (550)
T KOG0605|consen  234 RKDTLTEDWARFYIAETVLAIESIHQLG---YIHRDIKPDNLLIDAKGHIKLSDFGLSTGLDKKHRIESYRLDEQMQINL  310 (550)
T ss_pred             hcCcCchHHHHHHHHHHHHHHHHHHHcC---cccccCChhheeecCCCCEeeccccccchhhhhhhhhhhcchhhhhhhh
Confidence            4578999999999999999999999999   99999999999999999999999999864311                 


Q ss_pred             -----CCCCC----c-------------------ccccccccccCCcccccCCCcccccceEehhHHHHHHHhcccCCCC
Q 041793           66 -----DEIEG----N-------------------TNRVIGTYGYMAPEYASDGKFSVKSDVFSFGILLLEIISGKKNRGF  117 (224)
Q Consensus        66 -----~~~~~----~-------------------~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~  117 (224)
                           .....    .                   ....+||+-|+|||++.+.+|+..+|.||||||+|||+.|.+||..
T Consensus       311 ~~~~~~~~~~~~~~~~~~~~~~~~~~w~~nrr~~a~StVGTPDYiAPEVll~kgY~~~cDwWSLG~ImyEmLvGyPPF~s  390 (550)
T KOG0605|consen  311 SEAKPSDFPKFNTPRSTMSRREQLQTWKRNRRQLAYSTVGTPDYIAPEVLLGKGYGKECDWWSLGCIMYEMLVGYPPFCS  390 (550)
T ss_pred             ccCCCccccccccccchhhHHHHHHHHHhhhhhhhhcccCCccccchHHHhcCCCCccccHHHHHHHHHHHHhCCCCCCC
Confidence                 00000    0                   0123799999999999999999999999999999999999999876


Q ss_pred             cCCCcccccccccCCCccccCccccCCcCHHHHHHHHHHHHHhccCCCCCCCC---hHHHHH
Q 041793          118 YHSDNKLNLIGHVSMPSQLIDPCIQGSFNLVEVIRCIHIGLLCVQQHPKDRPS---MPSVIL  176 (224)
Q Consensus       118 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dp~~Rps---~~~v~~  176 (224)
                      ..+......+..+...-..++. .  ...    ....+||.+||. ||++|..   ++||.+
T Consensus       391 ~tp~~T~rkI~nwr~~l~fP~~-~--~~s----~eA~DLI~rll~-d~~~RLG~~G~~EIK~  444 (550)
T KOG0605|consen  391 ETPQETYRKIVNWRETLKFPEE-V--DLS----DEAKDLITRLLC-DPENRLGSKGAEEIKK  444 (550)
T ss_pred             CCHHHHHHHHHHHhhhccCCCc-C--ccc----HHHHHHHHHHhc-CHHHhcCcccHHHHhc
Confidence            5544333222222111111111 1  111    456788999999 9999975   666655


No 236
>cd05621 STKc_ROCK2 Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase 2. Serine/Threonine Kinases (STKs), ROCK subfamily, ROCK2 (or ROK-alpha) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK contains an N-terminal extension, a catalytic kinase domain, and a C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain, and is activated via interaction with Rho GTPases. ROCK2 was the first identified target of activated RhoA, and was found 
Probab=99.94  E-value=2.6e-26  Score=190.19  Aligned_cols=162  Identities=16%  Similarity=0.204  Sum_probs=116.9

Q ss_pred             CCCChHHHHHHHHHHHHHHhhhhcCCCCceEecCCCCCceEECCCCCceEeeecceeecCCCCCCCcccccccccccCCc
Q 041793            5 KILDWPKRFHIICGTARGVMYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDEIEGNTNRVIGTYGYMAP   84 (224)
Q Consensus         5 ~~l~~~~~~~i~~qi~~~l~~Lh~~~~~~i~H~dl~~~nil~~~~~~~kl~df~~~~~~~~~~~~~~~~~~~~~~~y~aP   84 (224)
                      ..+++..+..++.||+.||+|||+.+   |+||||||+||+++.++.+||+|||++........ .......|++.|+||
T Consensus       137 ~~~~~~~~~~~~~qil~aL~~LH~~~---IvHrDLKp~NILl~~~~~~kL~DFG~a~~~~~~~~-~~~~~~~gt~~Y~aP  212 (370)
T cd05621         137 YDVPEKWAKFYTAEVVLALDAIHSMG---LIHRDVKPDNMLLDKHGHLKLADFGTCMKMDETGM-VRCDTAVGTPDYISP  212 (370)
T ss_pred             cCCCHHHHHHHHHHHHHHHHHHHHCC---eEecCCCHHHEEECCCCCEEEEecccceecccCCc-eecccCCCCcccCCH
Confidence            35788999999999999999999999   99999999999999999999999999987543221 112345688999999


Q ss_pred             ccccCCC----cccccceEehhHHHHHHHhcccCCCCcCCCcccccccccCCCccccCccccCCcCHHHHHHHHHHHHHh
Q 041793           85 EYASDGK----FSVKSDVFSFGILLLEIISGKKNRGFYHSDNKLNLIGHVSMPSQLIDPCIQGSFNLVEVIRCIHIGLLC  160 (224)
Q Consensus        85 E~~~~~~----~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~c  160 (224)
                      |.+.+..    ++.++|+|||||++|+|++|..||........   ...+.......  ..+....  -...+.+++.+|
T Consensus       213 E~~~~~~~~~~~~~~~DiwSlG~ilyell~G~~Pf~~~~~~~~---~~~i~~~~~~~--~~p~~~~--~s~~~~~li~~~  285 (370)
T cd05621         213 EVLKSQGGDGYYGRECDWWSVGVFLFEMLVGDTPFYADSLVGT---YSKIMDHKNSL--NFPEDVE--ISKHAKNLICAF  285 (370)
T ss_pred             HHHhccCCCCCCCcccCEEeehHHHHHHHhCCCCCCCCCHHHH---HHHHHhCCccc--CCCCccc--CCHHHHHHHHHH
Confidence            9986543    67899999999999999999999864332111   11111100000  0011111  123456788899


Q ss_pred             ccCCCCC--CCChHHHHHH
Q 041793          161 VQQHPKD--RPSMPSVILM  177 (224)
Q Consensus       161 l~~dp~~--Rps~~~v~~~  177 (224)
                      |+.++.+  |+++.++++.
T Consensus       286 L~~~~~r~~R~~~~e~l~h  304 (370)
T cd05621         286 LTDREVRLGRNGVEEIKQH  304 (370)
T ss_pred             ccCchhccCCCCHHHHhcC
Confidence            9865544  8899999875


No 237
>cd06656 STKc_PAK3 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 3. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 3, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK3 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding 
Probab=99.94  E-value=1.8e-26  Score=185.73  Aligned_cols=159  Identities=22%  Similarity=0.333  Sum_probs=119.6

Q ss_pred             CCCChHHHHHHHHHHHHHHhhhhcCCCCceEecCCCCCceEECCCCCceEeeecceeecCCCCCCCcccccccccccCCc
Q 041793            5 KILDWPKRFHIICGTARGVMYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDEIEGNTNRVIGTYGYMAP   84 (224)
Q Consensus         5 ~~l~~~~~~~i~~qi~~~l~~Lh~~~~~~i~H~dl~~~nil~~~~~~~kl~df~~~~~~~~~~~~~~~~~~~~~~~y~aP   84 (224)
                      ..+++.++..++.|++.||.|||+.+   ++|+||+|+||+++.++.++++|||++.........  .....++..|++|
T Consensus       110 ~~~~~~~~~~~~~~l~~~L~~LH~~~---i~H~dL~p~Nili~~~~~~~l~Dfg~~~~~~~~~~~--~~~~~~~~~y~aP  184 (297)
T cd06656         110 TCMDEGQIAAVCRECLQALDFLHSNQ---VIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQSK--RSTMVGTPYWMAP  184 (297)
T ss_pred             CCCCHHHHHHHHHHHHHHHHHHHHCC---cccCCCCHHHEEECCCCCEEECcCccceEccCCccC--cCcccCCccccCH
Confidence            45788999999999999999999999   999999999999999999999999998765332211  1223567789999


Q ss_pred             ccccCCCcccccceEehhHHHHHHHhcccCCCCcCCCcccccccccCCCccccCccccCCcCHHHHHHHHHHHHHhccCC
Q 041793           85 EYASDGKFSVKSDVFSFGILLLEIISGKKNRGFYHSDNKLNLIGHVSMPSQLIDPCIQGSFNLVEVIRCIHIGLLCVQQH  164 (224)
Q Consensus        85 E~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~d  164 (224)
                      |.+.+..++.++|+||||+++|++++|..||................  ..  .......    ....+.+++.+||+.+
T Consensus       185 E~~~~~~~~~~~Di~slGvil~~l~tg~~pf~~~~~~~~~~~~~~~~--~~--~~~~~~~----~~~~~~~li~~~l~~~  256 (297)
T cd06656         185 EVVTRKAYGPKVDIWSLGIMAIEMVEGEPPYLNENPLRALYLIATNG--TP--ELQNPER----LSAVFRDFLNRCLEMD  256 (297)
T ss_pred             HHHcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCcchheeeeccCC--CC--CCCCccc----cCHHHHHHHHHHccCC
Confidence            99988888999999999999999999999985433221111111000  00  0000011    1133567889999999


Q ss_pred             CCCCCChHHHHH
Q 041793          165 PKDRPSMPSVIL  176 (224)
Q Consensus       165 p~~Rps~~~v~~  176 (224)
                      |++||++++|++
T Consensus       257 p~~Rps~~~il~  268 (297)
T cd06656         257 VDRRGSAKELLQ  268 (297)
T ss_pred             hhhCcCHHHHhc
Confidence            999999999977


No 238
>cd05628 STKc_NDR1 Catalytic domain of the Protein Serine/Threonine Kinase, Nuclear Dbf2-Related kinase 1. Serine/Threonine Kinases (STKs), NDR kinase subfamily, NDR1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. Higher eukaryotes contain two NDR isoforms, NDR1 and NDR2. Both isoforms play a role in proper centrosome duplication. NDR1 is highly expressed in thymus, mus
Probab=99.94  E-value=1.4e-26  Score=191.42  Aligned_cols=165  Identities=21%  Similarity=0.275  Sum_probs=116.1

Q ss_pred             CCCCCChHHHHHHHHHHHHHHhhhhcCCCCceEecCCCCCceEECCCCCceEeeecceeecCCCCCC-------------
Q 041793            3 RCKILDWPKRFHIICGTARGVMYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDEIE-------------   69 (224)
Q Consensus         3 ~~~~l~~~~~~~i~~qi~~~l~~Lh~~~~~~i~H~dl~~~nil~~~~~~~kl~df~~~~~~~~~~~~-------------   69 (224)
                      +.+.+++.++..++.||+.||+|||+.|   |+||||||+||+++.++.++|+|||++.........             
T Consensus        94 ~~~~l~~~~~~~~~~qi~~aL~~lH~~g---ivHrDlKp~NILi~~~~~vkL~DFGla~~~~~~~~~~~~~~~~~~~~~~  170 (363)
T cd05628          94 KKDTLTEEETQFYIAETVLAIDSIHQLG---FIHRDIKPDNLLLDSKGHVKLSDFGLCTGLKKAHRTEFYRNLNHSLPSD  170 (363)
T ss_pred             hcCCCCHHHHHHHHHHHHHHHHHHHhCC---eEecCCCHHHeEECCCCCEEEeeccCccccccccccccccccccccccc
Confidence            3567899999999999999999999999   999999999999999999999999998754321100             


Q ss_pred             --------------------CcccccccccccCCcccccCCCcccccceEehhHHHHHHHhcccCCCCcCCCcccccccc
Q 041793           70 --------------------GNTNRVIGTYGYMAPEYASDGKFSVKSDVFSFGILLLEIISGKKNRGFYHSDNKLNLIGH  129 (224)
Q Consensus        70 --------------------~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~  129 (224)
                                          .......|+..|+|||.+.+..++.++|+|||||++|+|++|..||...........+..
T Consensus       171 ~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~Y~aPE~~~~~~~~~~~DvwSlGvil~ell~G~~Pf~~~~~~~~~~~i~~  250 (363)
T cd05628         171 FTFQNMNSKRKAETWKRNRRQLAFSTVGTPDYIAPEVFMQTGYNKLCDWWSLGVIMYEMLIGYPPFCSETPQETYKKVMN  250 (363)
T ss_pred             ccccccccccccchhhhccccccccccCCccccCHHHHcCCCCCCchhhhhhHHHHHHHHhCCCCCCCCCHHHHHHHHHc
Confidence                                001224688999999999998999999999999999999999999865332222111111


Q ss_pred             cCCCccccCccccCCcCHHHHHHHHHHHHHhcc--CCCCCCCChHHHHHH
Q 041793          130 VSMPSQLIDPCIQGSFNLVEVIRCIHIGLLCVQ--QHPKDRPSMPSVILM  177 (224)
Q Consensus       130 ~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~--~dp~~Rps~~~v~~~  177 (224)
                      ...... .++..  ..+    ..+.+++.+++.  .++..||++++|++.
T Consensus       251 ~~~~~~-~p~~~--~~s----~~~~~li~~l~~~~~~r~~r~~~~ei~~h  293 (363)
T cd05628         251 WKETLI-FPPEV--PIS----EKAKDLILRFCCEWEHRIGAPGVEEIKTN  293 (363)
T ss_pred             CcCccc-CCCcC--CCC----HHHHHHHHHHcCChhhcCCCCCHHHHhCC
Confidence            100001 11111  111    124456666443  233456899999874


No 239
>cd06636 STKc_MAP4K4_6 Catalytic domain of the Protein Serine/Threonine Kinases, Mitogen-Activated Protein Kinase Kinase Kinase Kinase 4 and 6. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 4 (MAPKKKK4 or MAP4K4) and MAPKKKK6 (or MAP4K6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K4/MAP4K6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain. MAP4Ks (or MAPKKKKs) are involved in MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Ea
Probab=99.94  E-value=2.1e-26  Score=183.73  Aligned_cols=158  Identities=29%  Similarity=0.412  Sum_probs=117.3

Q ss_pred             CCCCChHHHHHHHHHHHHHHhhhhcCCCCceEecCCCCCceEECCCCCceEeeecceeecCCCCCCCcccccccccccCC
Q 041793            4 CKILDWPKRFHIICGTARGVMYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDEIEGNTNRVIGTYGYMA   83 (224)
Q Consensus         4 ~~~l~~~~~~~i~~qi~~~l~~Lh~~~~~~i~H~dl~~~nil~~~~~~~kl~df~~~~~~~~~~~~~~~~~~~~~~~y~a   83 (224)
                      ...+++..++.++.||+.||.|||+.+   ++|+||+|+||+++.++.++++|||++.......  .......++..|+|
T Consensus       115 ~~~~~~~~~~~~~~qi~~al~~LH~~~---ivH~dl~~~nili~~~~~~~l~dfg~~~~~~~~~--~~~~~~~~~~~y~a  189 (282)
T cd06636         115 GNALKEDWIAYICREILRGLAHLHAHK---VIHRDIKGQNVLLTENAEVKLVDFGVSAQLDRTV--GRRNTFIGTPYWMA  189 (282)
T ss_pred             CCCCCHHHHHHHHHHHHHHHHHHHHCC---cccCCCCHHHEEECCCCCEEEeeCcchhhhhccc--cCCCcccccccccC
Confidence            356888899999999999999999999   9999999999999999999999999987543211  11223457788999


Q ss_pred             ccccc-----CCCcccccceEehhHHHHHHHhcccCCCCcCCCcccccccccCCCccccCcccc-CCcCHHHHHHHHHHH
Q 041793           84 PEYAS-----DGKFSVKSDVFSFGILLLEIISGKKNRGFYHSDNKLNLIGHVSMPSQLIDPCIQ-GSFNLVEVIRCIHIG  157 (224)
Q Consensus        84 PE~~~-----~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~li  157 (224)
                      ||.+.     +..++.++|+||||+++|+|++|..||.............      ........ ...+    ..+.++|
T Consensus       190 PE~l~~~~~~~~~~~~~~DvwslG~~l~el~~g~~p~~~~~~~~~~~~~~------~~~~~~~~~~~~~----~~~~~li  259 (282)
T cd06636         190 PEVIACDENPDATYDYRSDIWSLGITAIEMAEGAPPLCDMHPMRALFLIP------RNPPPKLKSKKWS----KKFIDFI  259 (282)
T ss_pred             HhhcCcccCcCcCCCcccchhHHHHHHHHHHhCCCCccccCHHhhhhhHh------hCCCCCCcccccC----HHHHHHH
Confidence            99875     3457789999999999999999999985432211111000      00011111 1111    3477889


Q ss_pred             HHhccCCCCCCCChHHHHH
Q 041793          158 LLCVQQHPKDRPSMPSVIL  176 (224)
Q Consensus       158 ~~cl~~dp~~Rps~~~v~~  176 (224)
                      .+||+.||.+||++.+|++
T Consensus       260 ~~cl~~~p~~Rp~~~ell~  278 (282)
T cd06636         260 EGCLVKNYLSRPSTEQLLK  278 (282)
T ss_pred             HHHhCCChhhCcCHHHHhc
Confidence            9999999999999999964


No 240
>cd05625 STKc_LATS1 Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor 1. Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, LATS1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. Inactivation of LATS1 in mice results in the development of various tumors, including sarcomas and ovarian cancer. Promoter methylation, loss of heterozygosity, and missense mutations targeting the LATS1 gene have also been found in human sarcomas and ovarian cancers. In addition, decreased expression of LATS1 is associated with an aggressive phenotype an
Probab=99.94  E-value=1.9e-26  Score=191.78  Aligned_cols=162  Identities=23%  Similarity=0.306  Sum_probs=114.4

Q ss_pred             CCCCChHHHHHHHHHHHHHHhhhhcCCCCceEecCCCCCceEECCCCCceEeeecceeecCCCCC---------------
Q 041793            4 CKILDWPKRFHIICGTARGVMYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDEI---------------   68 (224)
Q Consensus         4 ~~~l~~~~~~~i~~qi~~~l~~Lh~~~~~~i~H~dl~~~nil~~~~~~~kl~df~~~~~~~~~~~---------------   68 (224)
                      .+.+++..+..++.||+.||.|||+.|   |+||||||+||+++.++.++|+|||++..+.....               
T Consensus        95 ~~~~~e~~~~~~~~qi~~al~~lH~~~---ivHrDlKp~NILl~~~g~~kL~DFGla~~~~~~~~~~~~~~~~~~~~~~~  171 (382)
T cd05625          95 MGIFPEDLARFYIAELTCAVESVHKMG---FIHRDIKPDNILIDRDGHIKLTDFGLCTGFRWTHDSKYYQSGDHVRQDSM  171 (382)
T ss_pred             cCCCCHHHHHHHHHHHHHHHHHHHhCC---eecCCCCHHHEEECCCCCEEEeECCCCccccccccccccccccccccccc
Confidence            356889999999999999999999999   99999999999999999999999999753210000               


Q ss_pred             ------------------------------CCcccccccccccCCcccccCCCcccccceEehhHHHHHHHhcccCCCCc
Q 041793           69 ------------------------------EGNTNRVIGTYGYMAPEYASDGKFSVKSDVFSFGILLLEIISGKKNRGFY  118 (224)
Q Consensus        69 ------------------------------~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~  118 (224)
                                                    ........|++.|+|||.+.+..++.++|+|||||++|+|++|..||...
T Consensus       172 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~DiwSlGvil~elltG~~Pf~~~  251 (382)
T cd05625         172 DFSNEWGDPANCRCGDRLKPLERRAARQHQRCLAHSLVGTPNYIAPEVLLRTGYTQLCDWWSVGVILYEMLVGQPPFLAQ  251 (382)
T ss_pred             cccccccccccccccccccchhhhhccccccccccccccCcccCCHHHhcCCCCCCeeeEEechHHHHHHHhCCCCCCCC
Confidence                                          00011235788999999999889999999999999999999999998654


Q ss_pred             CCCcccccccccCCCccccCccccCCcCHHHHHHHHHHHHHhccCCCCCCCC---hHHHHH
Q 041793          119 HSDNKLNLIGHVSMPSQLIDPCIQGSFNLVEVIRCIHIGLLCVQQHPKDRPS---MPSVIL  176 (224)
Q Consensus       119 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dp~~Rps---~~~v~~  176 (224)
                      ........+  .........+. ....+    ..+.+++.+|+ .+|++|++   +.++++
T Consensus       252 ~~~~~~~~i--~~~~~~~~~p~-~~~~s----~~~~~li~~l~-~~p~~R~~~~~~~ei~~  304 (382)
T cd05625         252 TPLETQMKV--INWQTSLHIPP-QAKLS----PEASDLIIKLC-RGPEDRLGKNGADEIKA  304 (382)
T ss_pred             CHHHHHHHH--HccCCCcCCCC-cccCC----HHHHHHHHHHc-cCHhHcCCCCCHHHHhc
Confidence            322111111  11111110010 01111    23456666765 59999997   777765


No 241
>cd06608 STKc_myosinIII_like Catalytic domain of Class III myosin-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), Class III myosin-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins with an N-terminal kinase catalytic domain and a C-terminal actin-binding motor domain. Class III myosins are present in the photoreceptors of invertebrates and vertebrates and in the auditory hair cells of mammals. The kinase domain of myosin III can phosphorylate several cytoskeletal proteins, conventional myosin regulatory light chains, and can autophosphorylate the C-terminal motor domain. Myosin I
Probab=99.94  E-value=1.7e-26  Score=183.01  Aligned_cols=160  Identities=29%  Similarity=0.400  Sum_probs=118.3

Q ss_pred             CCCCChHHHHHHHHHHHHHHhhhhcCCCCceEecCCCCCceEECCCCCceEeeecceeecCCCCCCCcccccccccccCC
Q 041793            4 CKILDWPKRFHIICGTARGVMYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDEIEGNTNRVIGTYGYMA   83 (224)
Q Consensus         4 ~~~l~~~~~~~i~~qi~~~l~~Lh~~~~~~i~H~dl~~~nil~~~~~~~kl~df~~~~~~~~~~~~~~~~~~~~~~~y~a   83 (224)
                      +..+++..++.++.|++.||.|||+.+   ++|+||+|+||+++.++.++|+|||++........  ......++..|+|
T Consensus       107 ~~~~~~~~~~~~~~ql~~al~~lH~~~---i~H~~l~p~ni~~~~~~~~~l~d~~~~~~~~~~~~--~~~~~~~~~~y~a  181 (275)
T cd06608         107 GKRLKEEWIAYILRETLRGLAYLHENK---VIHRDIKGQNILLTKNAEVKLVDFGVSAQLDSTLG--RRNTFIGTPYWMA  181 (275)
T ss_pred             CCCCCHHHHHHHHHHHHHHHHHHhcCC---cccCCCCHHHEEEccCCeEEECCCccceecccchh--hhcCccccccccC
Confidence            567899999999999999999999999   99999999999999999999999999876533221  1222456778999


Q ss_pred             cccccC-----CCcccccceEehhHHHHHHHhcccCCCCcCCCcccccccccCCCccccCccccCCcCHHHHHHHHHHHH
Q 041793           84 PEYASD-----GKFSVKSDVFSFGILLLEIISGKKNRGFYHSDNKLNLIGHVSMPSQLIDPCIQGSFNLVEVIRCIHIGL  158 (224)
Q Consensus        84 PE~~~~-----~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~  158 (224)
                      ||.+..     ..++.++|+||||++++++++|..||........  ........    ......  .......+.+++.
T Consensus       182 PE~~~~~~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~--~~~~~~~~----~~~~~~--~~~~~~~~~~li~  253 (275)
T cd06608         182 PEVIACDEQPDASYDARSDVWSLGITAIELADGKPPLCDMHPMRA--LFKIPRNP----PPTLKS--PENWSKKFNDFIS  253 (275)
T ss_pred             HhHhcccccccCCccccccHHHhHHHHHHHHhCCCCccccchHHH--HHHhhccC----CCCCCc--hhhcCHHHHHHHH
Confidence            998753     2357889999999999999999999854322111  11101000    001110  1111235678999


Q ss_pred             HhccCCCCCCCChHHHHH
Q 041793          159 LCVQQHPKDRPSMPSVIL  176 (224)
Q Consensus       159 ~cl~~dp~~Rps~~~v~~  176 (224)
                      +||..||++|||+.++++
T Consensus       254 ~~l~~dp~~Rpt~~~ll~  271 (275)
T cd06608         254 ECLIKNYEQRPFMEELLE  271 (275)
T ss_pred             HHhhcChhhCcCHHHHhc
Confidence            999999999999999975


No 242
>cd08227 PK_STRAD_alpha Pseudokinase domain of STE20-related kinase adapter protein alpha. Protein Kinase family, STE20-related kinase adapter protein (STRAD) alpha subfamily, pseudokinase domain. The STRAD alpha subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hype
Probab=99.94  E-value=1.4e-26  Score=188.74  Aligned_cols=110  Identities=20%  Similarity=0.270  Sum_probs=89.2

Q ss_pred             CCCChHHHHHHHHHHHHHHhhhhcCCCCceEecCCCCCceEECCCCCceEeeecceeecCCCCC-----CCccccccccc
Q 041793            5 KILDWPKRFHIICGTARGVMYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDEI-----EGNTNRVIGTY   79 (224)
Q Consensus         5 ~~l~~~~~~~i~~qi~~~l~~Lh~~~~~~i~H~dl~~~nil~~~~~~~kl~df~~~~~~~~~~~-----~~~~~~~~~~~   79 (224)
                      +.+++.+++.++.||+.||.|||+.+   |+|+||||+||+++.++.+++.||+..........     ........++.
T Consensus        96 ~~l~~~~~~~i~~qi~~~L~~LH~~~---iiH~dlkp~Nil~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  172 (327)
T cd08227          96 DGMSELAIAYILQGVLKALDYIHHMG---YVHRSVKASHILISVDGKVYLSGLRSNLSMINHGQRLRVVHDFPKYSVKVL  172 (327)
T ss_pred             CCCCHHHHHHHHHHHHHHHHHHHHCC---EecCCCChhhEEEecCCcEEEcccchhhcccccccccccccccccccccee
Confidence            45899999999999999999999999   99999999999999999999999976543321110     00111224566


Q ss_pred             ccCCcccccC--CCcccccceEehhHHHHHHHhcccCCCC
Q 041793           80 GYMAPEYASD--GKFSVKSDVFSFGILLLEIISGKKNRGF  117 (224)
Q Consensus        80 ~y~aPE~~~~--~~~~~~~Di~slG~il~~l~~g~~p~~~  117 (224)
                      .|+|||.+.+  ..++.++|||||||+++++++|+.||..
T Consensus       173 ~y~aPE~~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~  212 (327)
T cd08227         173 PWLSPEVLQQNLQGYDAKSDIYSVGITACELANGHVPFKD  212 (327)
T ss_pred             cccChHHhhcccCCCCchhhHHHHHHHHHHHHHCCCCCCC
Confidence            7999999875  3578999999999999999999999864


No 243
>cd06642 STKc_STK25-YSK1 Catalytic domain of the Protein Serine/Threonine Kinase, STK25 or Yeast Sps1/Ste20-related kinase 1. Serine/threonine kinases (STKs), STK25 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The STK25 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. STK25 is also called Ste20/oxidant stress response kinase 1 (SOK1) or yeast Sps1/Ste20-related kinase 1 (YSK1). STK25 is localized in the Golgi apparatus through its interaction with the Golgi matrix protein GM130. It may play a role in the regulation of cell migration and polarization. STK25 binds and phosphorylates CCM3 (cerebral cavernous malformation 3), also called PCD10 (programmed cell death 10), and may play a role in apoptosis. Human STK25 
Probab=99.94  E-value=1.8e-26  Score=183.78  Aligned_cols=158  Identities=30%  Similarity=0.464  Sum_probs=121.1

Q ss_pred             CCCChHHHHHHHHHHHHHHhhhhcCCCCceEecCCCCCceEECCCCCceEeeecceeecCCCCCCCcccccccccccCCc
Q 041793            5 KILDWPKRFHIICGTARGVMYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDEIEGNTNRVIGTYGYMAP   84 (224)
Q Consensus         5 ~~l~~~~~~~i~~qi~~~l~~Lh~~~~~~i~H~dl~~~nil~~~~~~~kl~df~~~~~~~~~~~~~~~~~~~~~~~y~aP   84 (224)
                      +.+++..+..++.||+.|+.|||+.+   ++|+||+|+||+++.++.++++|||++........  ......++..|++|
T Consensus        96 ~~~~~~~~~~~~~~i~~~l~~lH~~~---ivH~dl~p~ni~i~~~~~~~l~dfg~~~~~~~~~~--~~~~~~~~~~y~aP  170 (277)
T cd06642          96 GPLEETYIATILREILKGLDYLHSER---KIHRDIKAANVLLSEQGDVKLADFGVAGQLTDTQI--KRNTFVGTPFWMAP  170 (277)
T ss_pred             CCCCHHHHHHHHHHHHHHHHHHhcCC---eeccCCChheEEEeCCCCEEEccccccccccCcch--hhhcccCcccccCH
Confidence            56889999999999999999999999   99999999999999999999999999876543211  11223567789999


Q ss_pred             ccccCCCcccccceEehhHHHHHHHhcccCCCCcCCCcccccccccCCCccccCccccCCcCHHHHHHHHHHHHHhccCC
Q 041793           85 EYASDGKFSVKSDVFSFGILLLEIISGKKNRGFYHSDNKLNLIGHVSMPSQLIDPCIQGSFNLVEVIRCIHIGLLCVQQH  164 (224)
Q Consensus        85 E~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~d  164 (224)
                      |.+.+..++.++|+||||++++++++|..||................      .+....    .....+.+++.+||+.+
T Consensus       171 E~~~~~~~~~~~Dv~slG~il~el~tg~~p~~~~~~~~~~~~~~~~~------~~~~~~----~~~~~~~~li~~~l~~~  240 (277)
T cd06642         171 EVIKQSAYDFKADIWSLGITAIELAKGEPPNSDLHPMRVLFLIPKNS------PPTLEG----QYSKPFKEFVEACLNKD  240 (277)
T ss_pred             HHhCcCCCchhhhHHHHHHHHHHHHhCCCCCcccchhhHHhhhhcCC------CCCCCc----ccCHHHHHHHHHHccCC
Confidence            99988888999999999999999999999975433222111110000      111111    11234678999999999


Q ss_pred             CCCCCChHHHHHH
Q 041793          165 PKDRPSMPSVILM  177 (224)
Q Consensus       165 p~~Rps~~~v~~~  177 (224)
                      |++||++.++++.
T Consensus       241 p~~Rp~~~~il~~  253 (277)
T cd06642         241 PRFRPTAKELLKH  253 (277)
T ss_pred             cccCcCHHHHHHh
Confidence            9999999999874


No 244
>cd05633 STKc_GRK3 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 3. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK3 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK3 (also known as beta-adrenergic receptor kinase 2) is wi
Probab=99.94  E-value=1.4e-26  Score=184.75  Aligned_cols=159  Identities=23%  Similarity=0.314  Sum_probs=120.4

Q ss_pred             CCCCChHHHHHHHHHHHHHHhhhhcCCCCceEecCCCCCceEECCCCCceEeeecceeecCCCCCCCcccccccccccCC
Q 041793            4 CKILDWPKRFHIICGTARGVMYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDEIEGNTNRVIGTYGYMA   83 (224)
Q Consensus         4 ~~~l~~~~~~~i~~qi~~~l~~Lh~~~~~~i~H~dl~~~nil~~~~~~~kl~df~~~~~~~~~~~~~~~~~~~~~~~y~a   83 (224)
                      .+.+++.++..++.|++.||.|||+.+   ++|+||+|+||+++.++.++++|||++.......    .....++..|+|
T Consensus        91 ~~~l~~~~~~~i~~qi~~al~~lH~~~---ivH~dikp~Nil~~~~~~~~l~dfg~~~~~~~~~----~~~~~~~~~y~a  163 (279)
T cd05633          91 HGVFSEKEMRFYATEIILGLEHMHNRF---VVYRDLKPANILLDEHGHVRISDLGLACDFSKKK----PHASVGTHGYMA  163 (279)
T ss_pred             cCCCCHHHHHHHHHHHHHHHHHHHHCC---cCCCCCCHHHEEECCCCCEEEccCCcceeccccC----ccCcCCCcCccC
Confidence            456899999999999999999999999   9999999999999999999999999987543221    122457889999


Q ss_pred             cccccC-CCcccccceEehhHHHHHHHhcccCCCCcCCCcccccccccCCCccccCccccCCcCHHHHHHHHHHHHHhcc
Q 041793           84 PEYASD-GKFSVKSDVFSFGILLLEIISGKKNRGFYHSDNKLNLIGHVSMPSQLIDPCIQGSFNLVEVIRCIHIGLLCVQ  162 (224)
Q Consensus        84 PE~~~~-~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~  162 (224)
                      ||.+.+ ..++.++|+||+|++++++++|..||.................    .........    ...+.+++.+||.
T Consensus       164 PE~~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~~~~~~~~~~~~----~~~~~~~~~----~~~~~~li~~~l~  235 (279)
T cd05633         164 PEVLQKGTAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDKHEIDRMTLT----VNVELPDSF----SPELKSLLEGLLQ  235 (279)
T ss_pred             HHHhcCCCCCCchhhhHHHHHHHHHHHhCCCCcCCCCCcCHHHHHHHhhc----CCcCCcccc----CHHHHHHHHHHhc
Confidence            998864 5578999999999999999999999865433322211111100    011111111    2346788899999


Q ss_pred             CCCCCCC-----ChHHHHHH
Q 041793          163 QHPKDRP-----SMPSVILM  177 (224)
Q Consensus       163 ~dp~~Rp-----s~~~v~~~  177 (224)
                      .||++||     +++++++.
T Consensus       236 ~~p~~R~~~~~~~~~~~~~h  255 (279)
T cd05633         236 RDVSKRLGCLGRGAQEVKEH  255 (279)
T ss_pred             CCHHHhcCCCCCCHHHHHhC
Confidence            9999999     59888775


No 245
>KOG4717 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.94  E-value=1.1e-26  Score=190.30  Aligned_cols=156  Identities=21%  Similarity=0.321  Sum_probs=125.3

Q ss_pred             CCCCChHHHHHHHHHHHHHHhhhhcCCCCceEecCCCCCceEE-CCCCCceEeeecceeecCCCCCCCcccccccccccC
Q 041793            4 CKILDWPKRFHIICGTARGVMYLHQDSRLRIIHRDLKASNVLL-DQDMNPKISDFGLARAFGGDEIEGNTNRVIGTYGYM   82 (224)
Q Consensus         4 ~~~l~~~~~~~i~~qi~~~l~~Lh~~~~~~i~H~dl~~~nil~-~~~~~~kl~df~~~~~~~~~~~~~~~~~~~~~~~y~   82 (224)
                      .+.|++....+++.||+.||.|||...   ++||||||+|+++ .+-|.+||.|||+...+..+.   ...+.-|+..|.
T Consensus       112 e~Gl~E~La~kYF~QI~~AI~YCHqLH---VVHRDLKPENVVFFEKlGlVKLTDFGFSNkf~PG~---kL~TsCGSLAYS  185 (864)
T KOG4717|consen  112 EEGLNEDLAKKYFAQIVHAISYCHQLH---VVHRDLKPENVVFFEKLGLVKLTDFGFSNKFQPGK---KLTTSCGSLAYS  185 (864)
T ss_pred             hccccHHHHHHHHHHHHHHHHHHhhhh---hhcccCCcceeEEeeecCceEeeeccccccCCCcc---hhhcccchhhcc
Confidence            456889999999999999999999998   9999999999855 577999999999998876532   234567889999


Q ss_pred             CcccccCCCcc-cccceEehhHHHHHHHhcccCCCCcCCCcccccccccCCCccccCccccCCcCHHHHHHHHHHHHHhc
Q 041793           83 APEYASDGKFS-VKSDVFSFGILLLEIISGKKNRGFYHSDNKLNLIGHVSMPSQLIDPCIQGSFNLVEVIRCIHIGLLCV  161 (224)
Q Consensus        83 aPE~~~~~~~~-~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl  161 (224)
                      |||++.|..|+ ++.||||||+|+|.|++|+.||+...+.+-..   .+..+...++        .--...|.+||..||
T Consensus       186 APEILLGDsYDAPAVDiWSLGVILyMLVCGq~PFqeANDSETLT---mImDCKYtvP--------shvS~eCrdLI~sML  254 (864)
T KOG4717|consen  186 APEILLGDSYDAPAVDIWSLGVILYMLVCGQPPFQEANDSETLT---MIMDCKYTVP--------SHVSKECRDLIQSML  254 (864)
T ss_pred             CchhhhcCccCCcchhhhHHHHHHHHHHhCCCccccccchhhhh---hhhcccccCc--------hhhhHHHHHHHHHHH
Confidence            99999999997 88999999999999999999987654433222   1222222111        112356889999999


Q ss_pred             cCCCCCCCChHHHHH
Q 041793          162 QQHPKDRPSMPSVIL  176 (224)
Q Consensus       162 ~~dp~~Rps~~~v~~  176 (224)
                      ..||.+|.+.+||..
T Consensus       255 vRdPkkRAslEeI~s  269 (864)
T KOG4717|consen  255 VRDPKKRASLEEIVS  269 (864)
T ss_pred             hcCchhhccHHHHhc
Confidence            999999999999975


No 246
>KOG0194 consensus Protein tyrosine kinase [Signal transduction mechanisms]
Probab=99.94  E-value=2.8e-27  Score=196.55  Aligned_cols=169  Identities=29%  Similarity=0.350  Sum_probs=128.3

Q ss_pred             CCCCChHHHHHHHHHHHHHHhhhhcCCCCceEecCCCCCceEECCCCCceEeeecceeecCCCCCCCcccccccccccCC
Q 041793            4 CKILDWPKRFHIICGTARGVMYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDEIEGNTNRVIGTYGYMA   83 (224)
Q Consensus         4 ~~~l~~~~~~~i~~qi~~~l~~Lh~~~~~~i~H~dl~~~nil~~~~~~~kl~df~~~~~~~~~~~~~~~~~~~~~~~y~a   83 (224)
                      .+.++..+++.++.+.+.||+|||+++   ++||||.++|||+..++.+|++|||+++.......... . .--+..|+|
T Consensus       256 ~~~v~~~ek~~~~~~AA~Gl~YLh~k~---~IHRDIAARNcL~~~~~~vKISDFGLs~~~~~~~~~~~-~-~klPirWLA  330 (474)
T KOG0194|consen  256 KKSLPTLEKLRFCYDAARGLEYLHSKN---CIHRDIAARNCLYSKKGVVKISDFGLSRAGSQYVMKKF-L-KKLPIRWLA  330 (474)
T ss_pred             CCCCCHHHHHHHHHHHHhHHHHHHHCC---CcchhHhHHHheecCCCeEEeCccccccCCcceeeccc-c-ccCcceecC
Confidence            346999999999999999999999999   99999999999999999999999999876431111110 1 123578999


Q ss_pred             cccccCCCcccccceEehhHHHHHHHh-cccCCCCcCCCcccccccccCCCccccCccccCCcCHHHHHHHHHHHHHhcc
Q 041793           84 PEYASDGKFSVKSDVFSFGILLLEIIS-GKKNRGFYHSDNKLNLIGHVSMPSQLIDPCIQGSFNLVEVIRCIHIGLLCVQ  162 (224)
Q Consensus        84 PE~~~~~~~~~~~Di~slG~il~~l~~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~  162 (224)
                      ||.+..+.++.++||||||+++||+++ |..||......+....+....++...+.      ..+.   .+..++.+||.
T Consensus       331 PEtl~~~~~s~kTDV~sfGV~~~Eif~~g~~Py~g~~~~~v~~kI~~~~~r~~~~~------~~p~---~~~~~~~~c~~  401 (474)
T KOG0194|consen  331 PETLNTGIFSFKTDVWSFGVLLWEIFENGAEPYPGMKNYEVKAKIVKNGYRMPIPS------KTPK---ELAKVMKQCWK  401 (474)
T ss_pred             hhhhccCccccccchhheeeeEEeeeccCCCCCCCCCHHHHHHHHHhcCccCCCCC------CCHH---HHHHHHHHhcc
Confidence            999999999999999999999999998 6778766554433333322222222211      2222   35567779999


Q ss_pred             CCCCCCCChHHHHHHhccCCCCCC
Q 041793          163 QHPKDRPSMPSVILMLGSEIVLPQ  186 (224)
Q Consensus       163 ~dp~~Rps~~~v~~~L~~~~~~~~  186 (224)
                      .||+.||+|.++.+.|+.......
T Consensus       402 ~~p~~R~tm~~i~~~l~~~~~~~~  425 (474)
T KOG0194|consen  402 KDPEDRPTMSTIKKKLEALEKKKE  425 (474)
T ss_pred             CChhhccCHHHHHHHHHHHHhccc
Confidence            999999999999999987644433


No 247
>KOG1035 consensus eIF-2alpha kinase GCN2 [Translation, ribosomal structure and biogenesis]
Probab=99.94  E-value=1.1e-26  Score=205.28  Aligned_cols=156  Identities=28%  Similarity=0.494  Sum_probs=118.0

Q ss_pred             hHHHHHHHHHHHHHHhhhhcCCCCceEecCCCCCceEECCCCCceEeeecceeecC----------------CCCCCCcc
Q 041793            9 WPKRFHIICGTARGVMYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFG----------------GDEIEGNT   72 (224)
Q Consensus         9 ~~~~~~i~~qi~~~l~~Lh~~~~~~i~H~dl~~~nil~~~~~~~kl~df~~~~~~~----------------~~~~~~~~   72 (224)
                      -...|+++.+|++||.|+|+.|   ++||||||.|||++.+..+||+|||+++...                ........
T Consensus       696 ~d~~wrLFreIlEGLaYIH~~g---iIHRDLKP~NIFLd~~~~VKIGDFGLAt~~~~~~~~~d~~~~~~~~~~g~~~~~~  772 (1351)
T KOG1035|consen  696 RDEAWRLFREILEGLAYIHDQG---IIHRDLKPRNIFLDSRNSVKIGDFGLATDLKENLESIDQDLSFSTNRAGSNDGDL  772 (1351)
T ss_pred             hHHHHHHHHHHHHHHHHHHhCc---eeeccCCcceeEEcCCCCeeecccccchhhhhhhhhHhhccCccccccCCCCccc
Confidence            5678999999999999999999   9999999999999999999999999998721                01112234


Q ss_pred             cccccccccCCcccccCCC---cccccceEehhHHHHHHHhcccCCCCcCCCcccccccccCCCccccCccccCCcCHHH
Q 041793           73 NRVIGTYGYMAPEYASDGK---FSVKSDVFSFGILLLEIISGKKNRGFYHSDNKLNLIGHVSMPSQLIDPCIQGSFNLVE  149 (224)
Q Consensus        73 ~~~~~~~~y~aPE~~~~~~---~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  149 (224)
                      +..+||.-|.|||++.+..   |+.|+||||||+|++||+.   ||+  ...+....+..... ..++.+   .+....+
T Consensus       773 Ts~VGTalYvAPEll~~~~~~~Yn~KiDmYSLGIVlFEM~y---PF~--TsMERa~iL~~LR~-g~iP~~---~~f~~~~  843 (1351)
T KOG1035|consen  773 TSQVGTALYVAPELLSDTSSNKYNSKIDMYSLGIVLFEMLY---PFG--TSMERASILTNLRK-GSIPEP---ADFFDPE  843 (1351)
T ss_pred             ccccceeeeecHHHhcccccccccchhhhHHHHHHHHHHhc---cCC--chHHHHHHHHhccc-CCCCCC---ccccccc
Confidence            5578999999999997655   8999999999999999985   342  33344333333331 111111   2233334


Q ss_pred             HHHHHHHHHHhccCCCCCCCChHHHHH
Q 041793          150 VIRCIHIGLLCVQQHPKDRPSMPSVIL  176 (224)
Q Consensus       150 ~~~~~~li~~cl~~dp~~Rps~~~v~~  176 (224)
                      ...-.++|.+|++.||++|||+.|+++
T Consensus       844 ~~~e~slI~~Ll~hdP~kRPtA~eLL~  870 (1351)
T KOG1035|consen  844 HPEEASLIRWLLSHDPSKRPTATELLN  870 (1351)
T ss_pred             chHHHHHHHHHhcCCCccCCCHHHHhh
Confidence            455578999999999999999999965


No 248
>cd07833 STKc_CDKL Catalytic domain of Cyclin-Dependent protein Kinase Like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like (CDKL) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDKL1-5 and similar proteins. Some CDKLs, like CDKL1 and CDKL3, may be implicated in transformation and others, like CDKL3 and CDKL5, are associated with mental retardation when impaired. CDKL2 plays a role in learning 
Probab=99.94  E-value=2e-26  Score=184.09  Aligned_cols=169  Identities=22%  Similarity=0.297  Sum_probs=121.4

Q ss_pred             CCCCChHHHHHHHHHHHHHHhhhhcCCCCceEecCCCCCceEECCCCCceEeeecceeecCCCCCCCcccccccccccCC
Q 041793            4 CKILDWPKRFHIICGTARGVMYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDEIEGNTNRVIGTYGYMA   83 (224)
Q Consensus         4 ~~~l~~~~~~~i~~qi~~~l~~Lh~~~~~~i~H~dl~~~nil~~~~~~~kl~df~~~~~~~~~~~~~~~~~~~~~~~y~a   83 (224)
                      ...+++.+++.++.||+.||.|||+.+   ++|+||+|+||+++.++.++|+|||++........ .......++..|+|
T Consensus        94 ~~~~~~~~~~~~~~~i~~~l~~LH~~~---i~H~dl~~~ni~~~~~~~~kl~d~g~~~~~~~~~~-~~~~~~~~~~~~~~  169 (288)
T cd07833          94 PGGLPPDAVRSYIWQLLQAIAYCHSHN---IIHRDIKPENILVSESGVLKLCDFGFARALRARPA-SPLTDYVATRWYRA  169 (288)
T ss_pred             CCCCCHHHHHHHHHHHHHHHHHHHHCC---eecCCCCHHHeEECCCCCEEEEeeecccccCCCcc-ccccCcccccCCcC
Confidence            456899999999999999999999999   99999999999999999999999999887644321 12223456778999


Q ss_pred             cccccCC-CcccccceEehhHHHHHHHhcccCCCCcCCCccccccccc-----------------CCCccccCcccc---
Q 041793           84 PEYASDG-KFSVKSDVFSFGILLLEIISGKKNRGFYHSDNKLNLIGHV-----------------SMPSQLIDPCIQ---  142 (224)
Q Consensus        84 PE~~~~~-~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~-----------------~~~~~~~~~~~~---  142 (224)
                      ||.+.+. .++.++|+||||++++++++|..||......+........                 .......+....   
T Consensus       170 PE~~~~~~~~~~~~Dv~slG~~l~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  249 (288)
T cd07833         170 PELLVGDTNYGKPVDVWAIGCIMAELLDGEPLFPGDSDIDQLYLIQKCLGPLPPSHQELFSSNPRFAGVAFPEPSQPESL  249 (288)
T ss_pred             CchhcCCCCcCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCHHHhhhcccCccccccccCCCCCcHHH
Confidence            9999887 7889999999999999999999988643322111000000                 000000000000   


Q ss_pred             -CCcCHHHHHHHHHHHHHhccCCCCCCCChHHHHH
Q 041793          143 -GSFNLVEVIRCIHIGLLCVQQHPKDRPSMPSVIL  176 (224)
Q Consensus       143 -~~~~~~~~~~~~~li~~cl~~dp~~Rps~~~v~~  176 (224)
                       ..........+.++|++||..+|++||+++++++
T Consensus       250 ~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~  284 (288)
T cd07833         250 ERRYPGKVSSPALDFLKACLRMDPKERLTCDELLQ  284 (288)
T ss_pred             HHhcCCccchHHHHHHHHHhccCchhcccHHHHhc
Confidence             0000011245788999999999999999999875


No 249
>cd05629 STKc_NDR_like_fungal Catalytic domain of Fungal Nuclear Dbf2-Related kinase-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), NDR kinase subfamily, fungal NDR-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This group is composed of fungal NDR-like proteins including Saccharomyces cerevisiae CBK1 (or CBK1p), Schizosaccharomyces pombe Orb6 (or Orb6p), Ustilago maydis Ukc1 (or Ukc1p), and Neurospora crassa Cot1. Like NDR kinase, group members contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. CBK1 is an essential component in the RAM (regulation of 
Probab=99.94  E-value=1.8e-26  Score=191.63  Aligned_cols=163  Identities=20%  Similarity=0.252  Sum_probs=116.8

Q ss_pred             CCCCChHHHHHHHHHHHHHHhhhhcCCCCceEecCCCCCceEECCCCCceEeeecceeecCCCCCC------------C-
Q 041793            4 CKILDWPKRFHIICGTARGVMYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDEIE------------G-   70 (224)
Q Consensus         4 ~~~l~~~~~~~i~~qi~~~l~~Lh~~~~~~i~H~dl~~~nil~~~~~~~kl~df~~~~~~~~~~~~------------~-   70 (224)
                      .+.+++..+..++.|++.||+|||+.|   |+||||||+||+++.++.++++|||+++.+......            . 
T Consensus        95 ~~~~~~~~~~~~~~ql~~aL~~LH~~g---ivHrDlkp~NIll~~~~~~kl~DfGla~~~~~~~~~~~~~~~~~~~~~~~  171 (377)
T cd05629          95 YDTFSEDVTRFYMAECVLAIEAVHKLG---FIHRDIKPDNILIDRGGHIKLSDFGLSTGFHKQHDSAYYQKLLQGKSNKN  171 (377)
T ss_pred             cCCCCHHHHHHHHHHHHHHHHHHHhCC---eeccCCCHHHEEECCCCCEEEeeccccccccccccccccccccccccccc
Confidence            467889999999999999999999999   999999999999999999999999998643210000            0 


Q ss_pred             --------------------------------cccccccccccCCcccccCCCcccccceEehhHHHHHHHhcccCCCCc
Q 041793           71 --------------------------------NTNRVIGTYGYMAPEYASDGKFSVKSDVFSFGILLLEIISGKKNRGFY  118 (224)
Q Consensus        71 --------------------------------~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~  118 (224)
                                                      ......|++.|+|||.+.+..++.++|+|||||++|+|++|..||...
T Consensus       172 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~elltG~~Pf~~~  251 (377)
T cd05629         172 RIDNRNSVAVDSINLTMSSKDQIATWKKNRRLMAYSTVGTPDYIAPEIFLQQGYGQECDWWSLGAIMFECLIGWPPFCSE  251 (377)
T ss_pred             ccccccccccccccccccchhhhhhhhhcccccccccCCCccccCHHHHccCCCCCceeeEecchhhhhhhcCCCCCCCC
Confidence                                            001135788999999998888999999999999999999999998654


Q ss_pred             CCCcccccccccCCCccccCccccCCcCHHHHHHHHHHHHHhccCCCCCC---CChHHHHHH
Q 041793          119 HSDNKLNLIGHVSMPSQLIDPCIQGSFNLVEVIRCIHIGLLCVQQHPKDR---PSMPSVILM  177 (224)
Q Consensus       119 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dp~~R---ps~~~v~~~  177 (224)
                      ........+.........++. .  ..    ...+.+++.+||+ +|.+|   +++.++++.
T Consensus       252 ~~~~~~~~i~~~~~~~~~p~~-~--~~----s~~~~dli~~lL~-~~~~r~~r~~~~~~l~h  305 (377)
T cd05629         252 NSHETYRKIINWRETLYFPDD-I--HL----SVEAEDLIRRLIT-NAENRLGRGGAHEIKSH  305 (377)
T ss_pred             CHHHHHHHHHccCCccCCCCC-C--CC----CHHHHHHHHHHhc-CHhhcCCCCCHHHHhcC
Confidence            332211111111000011110 0  01    1245678889997 67765   599998875


No 250
>cd08221 STKc_Nek9 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 9. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 9 (Nek9) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek9 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek9, also called Nercc1, is primarily a cytoplasmic protein but can also localize in the nucleus. It is involved in modulating chromosome alignment and splitting during mitosis. It interacts with the gamma-tubulin ring complex and the Ran GTPase, and is implicated in microtubule organization. Nek9 associa
Probab=99.94  E-value=2e-26  Score=181.23  Aligned_cols=160  Identities=24%  Similarity=0.414  Sum_probs=122.6

Q ss_pred             CCCCChHHHHHHHHHHHHHHhhhhcCCCCceEecCCCCCceEECCCCCceEeeecceeecCCCCCCCcccccccccccCC
Q 041793            4 CKILDWPKRFHIICGTARGVMYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDEIEGNTNRVIGTYGYMA   83 (224)
Q Consensus         4 ~~~l~~~~~~~i~~qi~~~l~~Lh~~~~~~i~H~dl~~~nil~~~~~~~kl~df~~~~~~~~~~~~~~~~~~~~~~~y~a   83 (224)
                      ...+++.++..++.|++.||.|||+.|   ++|+||+|+||+++.++.++++|||++........  ......++..|.|
T Consensus        95 ~~~~~~~~~~~~~~~l~~~l~~lh~~~---i~h~dl~p~ni~~~~~~~~kl~d~~~~~~~~~~~~--~~~~~~~~~~y~a  169 (256)
T cd08221          95 GQLFEEEMVLWYLFQIVSAVSYIHKAG---ILHRDIKTLNIFLTKAGLIKLGDFGISKILGSEYS--MAETVVGTPYYMS  169 (256)
T ss_pred             ccCCCHHHHHHHHHHHHHHHHHHHhCC---ccccCCChHhEEEeCCCCEEECcCcceEEcccccc--cccccCCCccccC
Confidence            356899999999999999999999999   99999999999999999999999999987644321  1223457889999


Q ss_pred             cccccCCCcccccceEehhHHHHHHHhcccCCCCcCCCcccccccccCCCccccCccccCCcCHHHHHHHHHHHHHhccC
Q 041793           84 PEYASDGKFSVKSDVFSFGILLLEIISGKKNRGFYHSDNKLNLIGHVSMPSQLIDPCIQGSFNLVEVIRCIHIGLLCVQQ  163 (224)
Q Consensus        84 PE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~  163 (224)
                      ||.+.+..++.++|+||||+++++|++|..||........   ...+.... . .+. ....    ...+.+++.+||+.
T Consensus       170 pe~~~~~~~~~~~Dv~slG~i~~~l~~g~~~~~~~~~~~~---~~~~~~~~-~-~~~-~~~~----~~~~~~~i~~~l~~  239 (256)
T cd08221         170 PELCQGVKYNFKSDIWALGCVLYELLTLKRTFDATNPLNL---VVKIVQGN-Y-TPV-VSVY----SSELISLVHSLLQQ  239 (256)
T ss_pred             HhhcCCCCCCCcchhHHHHHHHHHHHHCCCCCCCCCHHHH---HHHHHcCC-C-CCC-cccc----CHHHHHHHHHHccc
Confidence            9999888889999999999999999999999754332211   11111100 0 000 0111    23466888999999


Q ss_pred             CCCCCCChHHHHHHh
Q 041793          164 HPKDRPSMPSVILML  178 (224)
Q Consensus       164 dp~~Rps~~~v~~~L  178 (224)
                      +|++||+++++++.+
T Consensus       240 ~p~~R~s~~~ll~~~  254 (256)
T cd08221         240 DPEKRPTADEVLDQP  254 (256)
T ss_pred             CcccCCCHHHHhhCc
Confidence            999999999998753


No 251
>cd06631 STKc_YSK4 Catalytic domain of the Protein Serine/Threonine Kinase, Yeast Sps1/Ste20-related kinase 4. Serine/threonine kinases (STKs), yeast Sps1/Ste20-related kinase 4 (YSK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The YSK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. YSK4 is a putative MAPKKK, whose mammalian gene has been isolated. MAPKKKs (MKKKs or MAP3Ks) phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals.
Probab=99.94  E-value=1.8e-26  Score=182.46  Aligned_cols=162  Identities=27%  Similarity=0.393  Sum_probs=120.4

Q ss_pred             CCCCChHHHHHHHHHHHHHHhhhhcCCCCceEecCCCCCceEECCCCCceEeeecceeecCCCCC----CCccccccccc
Q 041793            4 CKILDWPKRFHIICGTARGVMYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDEI----EGNTNRVIGTY   79 (224)
Q Consensus         4 ~~~l~~~~~~~i~~qi~~~l~~Lh~~~~~~i~H~dl~~~nil~~~~~~~kl~df~~~~~~~~~~~----~~~~~~~~~~~   79 (224)
                      .+.+++..+..++.|++.||+|||+.+   ++|+||+|+||+++.++.++++|||++........    ........++.
T Consensus        96 ~~~~~~~~~~~~~~qi~~~l~~lH~~~---i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~  172 (265)
T cd06631          96 FGPLPEPVFCKYTKQILDGVAYLHNNC---VVHRDIKGNNVMLMPNGIIKLIDFGCARRLAWVGLHGTHSNMLKSMHGTP  172 (265)
T ss_pred             cCCCCHHHHHHHHHHHHHHHHHHHhCC---cccCCcCHHhEEECCCCeEEeccchhhHhhhhccccccccccccccCCCc
Confidence            356899999999999999999999999   99999999999999999999999999875422110    11112245678


Q ss_pred             ccCCcccccCCCcccccceEehhHHHHHHHhcccCCCCcCCCcccccccccCCCccccCccccCCcCHHHHHHHHHHHHH
Q 041793           80 GYMAPEYASDGKFSVKSDVFSFGILLLEIISGKKNRGFYHSDNKLNLIGHVSMPSQLIDPCIQGSFNLVEVIRCIHIGLL  159 (224)
Q Consensus        80 ~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~  159 (224)
                      .|+|||.+.+..++.++|+||||++++++++|..||..............    .....+......    ...+.+++.+
T Consensus       173 ~~~~pe~~~~~~~~~~~Dv~slG~~~~~l~~g~~p~~~~~~~~~~~~~~~----~~~~~~~~~~~~----~~~~~~~i~~  244 (265)
T cd06631         173 YWMAPEVINESGYGRKSDIWSIGCTVFEMATGKPPLASMDRLAAMFYIGA----HRGLMPRLPDSF----SAAAIDFVTS  244 (265)
T ss_pred             cccChhhhcCCCCcchhhHHHHHHHHHHHHhCCCccccCChHHHHHHhhh----ccCCCCCCCCCC----CHHHHHHHHH
Confidence            89999999888889999999999999999999999864322211111100    000111111122    2346788999


Q ss_pred             hccCCCCCCCChHHHHH
Q 041793          160 CVQQHPKDRPSMPSVIL  176 (224)
Q Consensus       160 cl~~dp~~Rps~~~v~~  176 (224)
                      ||+.+|++||++.++++
T Consensus       245 ~l~~~p~~Rp~~~~~l~  261 (265)
T cd06631         245 CLTRDQHERPSALQLLR  261 (265)
T ss_pred             HhcCCcccCCCHHHHhc
Confidence            99999999999999864


No 252
>cd06610 STKc_OSR1_SPAK Catalytic domain of the Protein Serine/Threonine Kinases, Oxidative stress response kinase and Ste20-related proline alanine-rich kinase. Serine/threonine kinases (STKs), oxidative stress response kinase (OSR1) and Ste20-related proline alanine-rich kinase (SPAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The OSR1 and SPAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. SPAK is also referred to as STK39 or PASK (proline-alanine-rich STE20-related kinase). OSR1 and SPAK regulate the activity of cation-chloride cotransporters through direct interaction and phosphorylation. They are also implicated in cytoskeletal rearrangement, cell differentiation, transformation and proliferation. OSR1 
Probab=99.93  E-value=2.8e-26  Score=181.22  Aligned_cols=163  Identities=27%  Similarity=0.429  Sum_probs=120.6

Q ss_pred             CCCChHHHHHHHHHHHHHHhhhhcCCCCceEecCCCCCceEECCCCCceEeeecceeecCCCCCCC--cccccccccccC
Q 041793            5 KILDWPKRFHIICGTARGVMYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDEIEG--NTNRVIGTYGYM   82 (224)
Q Consensus         5 ~~l~~~~~~~i~~qi~~~l~~Lh~~~~~~i~H~dl~~~nil~~~~~~~kl~df~~~~~~~~~~~~~--~~~~~~~~~~y~   82 (224)
                      ..+++..+..++.|++.||.|||+.|   ++|+||+|+||+++.++.++|+|||++..........  ......++..|+
T Consensus        97 ~~~~~~~~~~~~~ql~~al~~lh~~~---i~h~~l~p~ni~~~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~~~~~y~  173 (267)
T cd06610          97 GGLDEAIIATVLKEVLKGLEYLHSNG---QIHRDIKAGNILLGEDGSVKIADFGVSASLADGGDRTRKVRKTFVGTPCWM  173 (267)
T ss_pred             CCCCHHHHHHHHHHHHHHHHHHHhCC---eecCCCCHHhEEEcCCCCEEEcccchHHHhccCccccccccccccCChhhc
Confidence            46899999999999999999999999   9999999999999999999999999987664332211  122345678899


Q ss_pred             CcccccCC-CcccccceEehhHHHHHHHhcccCCCCcCCCcccccccccCCCccccCccccCCcC-HHHHHHHHHHHHHh
Q 041793           83 APEYASDG-KFSVKSDVFSFGILLLEIISGKKNRGFYHSDNKLNLIGHVSMPSQLIDPCIQGSFN-LVEVIRCIHIGLLC  160 (224)
Q Consensus        83 aPE~~~~~-~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~li~~c  160 (224)
                      +||.+... .++.++|+||||+++++|++|+.||.........  ........    ........ ......+.+++.+|
T Consensus       174 ~Pe~~~~~~~~~~~~Dv~slG~i~~~l~~g~~p~~~~~~~~~~--~~~~~~~~----~~~~~~~~~~~~~~~~~~li~~~  247 (267)
T cd06610         174 APEVMEQVHGYDFKADIWSFGITAIELATGAAPYSKYPPMKVL--MLTLQNDP----PSLETGADYKKYSKSFRKMISLC  247 (267)
T ss_pred             ChHHHccccCcCcccchHhHhHHHHHHHhCCCCccccChhhhH--HHHhcCCC----CCcCCccccccccHHHHHHHHHH
Confidence            99998766 6789999999999999999999998643322111  11111000    01111110 01123467899999


Q ss_pred             ccCCCCCCCChHHHHH
Q 041793          161 VQQHPKDRPSMPSVIL  176 (224)
Q Consensus       161 l~~dp~~Rps~~~v~~  176 (224)
                      |+.||++||++++|++
T Consensus       248 l~~~p~~Rp~~~~ll~  263 (267)
T cd06610         248 LQKDPSKRPTAEELLK  263 (267)
T ss_pred             cCCChhhCcCHHHHhh
Confidence            9999999999999975


No 253
>cd05630 STKc_GRK6 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 6. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK6 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK6 is widely expressed in many tissues. t is expressed as 
Probab=99.93  E-value=1.4e-26  Score=185.38  Aligned_cols=159  Identities=25%  Similarity=0.372  Sum_probs=119.5

Q ss_pred             CCCChHHHHHHHHHHHHHHhhhhcCCCCceEecCCCCCceEECCCCCceEeeecceeecCCCCCCCcccccccccccCCc
Q 041793            5 KILDWPKRFHIICGTARGVMYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDEIEGNTNRVIGTYGYMAP   84 (224)
Q Consensus         5 ~~l~~~~~~~i~~qi~~~l~~Lh~~~~~~i~H~dl~~~nil~~~~~~~kl~df~~~~~~~~~~~~~~~~~~~~~~~y~aP   84 (224)
                      ..+++.+++.++.|++.||.|||+.+   |+|+||+|+||+++.++.++++|||++.......   ......++..|+||
T Consensus        97 ~~l~~~~~~~~~~qi~~~l~~lH~~~---iiH~dikp~Nil~~~~~~~~l~Dfg~~~~~~~~~---~~~~~~g~~~y~aP  170 (285)
T cd05630          97 AGFEEGRAVFYAAEICCGLEDLHQER---IVYRDLKPENILLDDHGHIRISDLGLAVHVPEGQ---TIKGRVGTVGYMAP  170 (285)
T ss_pred             cCCCHHHHHHHHHHHHHHHHHHHhCC---EEeCCCCHHHEEECCCCCEEEeeccceeecCCCc---cccCCCCCccccCh
Confidence            46889999999999999999999999   9999999999999999999999999987643221   11223678899999


Q ss_pred             ccccCCCcccccceEehhHHHHHHHhcccCCCCcCCCcccccccccCCCccccCccccCCcCHHHHHHHHHHHHHhccCC
Q 041793           85 EYASDGKFSVKSDVFSFGILLLEIISGKKNRGFYHSDNKLNLIGHVSMPSQLIDPCIQGSFNLVEVIRCIHIGLLCVQQH  164 (224)
Q Consensus        85 E~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~d  164 (224)
                      |.+.+..++.++|+||||+++|+|++|..||................  ..... ......+    ..+.+|+.+||+.|
T Consensus       171 E~~~~~~~~~~~DiwslG~~l~~l~~g~~Pf~~~~~~~~~~~~~~~~--~~~~~-~~~~~~~----~~~~~li~~~l~~~  243 (285)
T cd05630         171 EVVKNERYTFSPDWWALGCLLYEMIAGQSPFQQRKKKIKREEVERLV--KEVQE-EYSEKFS----PDARSLCKMLLCKD  243 (285)
T ss_pred             HHHcCCCCCCccccHHHHHHHHHHHhCCCCCCCCCccchHHHHHhhh--hhhhh-hcCccCC----HHHHHHHHHHhhcC
Confidence            99998889999999999999999999999986533221111111000  00000 0111111    23568889999999


Q ss_pred             CCCCCC-----hHHHHH
Q 041793          165 PKDRPS-----MPSVIL  176 (224)
Q Consensus       165 p~~Rps-----~~~v~~  176 (224)
                      |++|||     ++++++
T Consensus       244 p~~R~s~~~~~~~~~~~  260 (285)
T cd05630         244 PKERLGCQGGGAREVKE  260 (285)
T ss_pred             HHHccCCCCCchHHHHc
Confidence            999999     778776


No 254
>cd05598 STKc_LATS Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor. Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS was originally identified in Drosophila using a screen for genes whose inactivation led to overproliferation of cells. In tetrapods, there are two LATS isoforms, LATS1 and LATS2. Inactivation of LATS1 in mice results in the development of various tumors, including sarcomas and ovarian cancer. LATS functions as a tumor suppressor and is implicated in cell cycle regulation.
Probab=99.93  E-value=1.2e-26  Score=192.62  Aligned_cols=163  Identities=22%  Similarity=0.279  Sum_probs=116.8

Q ss_pred             CCCCChHHHHHHHHHHHHHHhhhhcCCCCceEecCCCCCceEECCCCCceEeeecceeecCCCCC---------------
Q 041793            4 CKILDWPKRFHIICGTARGVMYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDEI---------------   68 (224)
Q Consensus         4 ~~~l~~~~~~~i~~qi~~~l~~Lh~~~~~~i~H~dl~~~nil~~~~~~~kl~df~~~~~~~~~~~---------------   68 (224)
                      .+.+++..+..++.||+.||+|||+.|   |+||||||+||+++.++.++|+|||++..+.....               
T Consensus        95 ~~~~~~~~~~~~~~qi~~al~~lH~~~---ivHrDlkp~Nill~~~~~ikL~DFG~a~~~~~~~~~~~~~~~~~~~~~~~  171 (376)
T cd05598          95 LGIFEEDLARFYIAELTCAIESVHKMG---FIHRDIKPDNILIDRDGHIKLTDFGLCTGFRWTHDSKYYQKGDHHRQDSM  171 (376)
T ss_pred             cCCCCHHHHHHHHHHHHHHHHHHHHCC---eEeCCCCHHHEEECCCCCEEEEeCCCCccccccccccccccccccccccc
Confidence            456888999999999999999999999   99999999999999999999999999753210000               


Q ss_pred             --------------------------CCcccccccccccCCcccccCCCcccccceEehhHHHHHHHhcccCCCCcCCCc
Q 041793           69 --------------------------EGNTNRVIGTYGYMAPEYASDGKFSVKSDVFSFGILLLEIISGKKNRGFYHSDN  122 (224)
Q Consensus        69 --------------------------~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~  122 (224)
                                                ........|+..|+|||.+.+..++.++|||||||++|+|++|+.||.......
T Consensus       172 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvilyell~G~~Pf~~~~~~~  251 (376)
T cd05598         172 EPSEEWSEIDRCRLKPLERRRKRQHQRCLAHSLVGTPNYIAPEVLLRTGYTQLCDWWSVGVILYEMLVGQPPFLADTPAE  251 (376)
T ss_pred             cccccccccccccccchhhhhhhhcccccccccCCCccccCHHHHcCCCCCcceeeeeccceeeehhhCCCCCCCCCHHH
Confidence                                      000112468889999999998889999999999999999999999986544322


Q ss_pred             ccccccccCCCccccCccccCCcCHHHHHHHHHHHHHhccCCCCCCC---ChHHHHHH
Q 041793          123 KLNLIGHVSMPSQLIDPCIQGSFNLVEVIRCIHIGLLCVQQHPKDRP---SMPSVILM  177 (224)
Q Consensus       123 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dp~~Rp---s~~~v~~~  177 (224)
                      ....+....  .....+. ....+    ..+.+++.+|+ .+|.+|+   ++.++++.
T Consensus       252 ~~~~i~~~~--~~~~~~~-~~~~s----~~~~~li~~l~-~~p~~R~~~~t~~ell~h  301 (376)
T cd05598         252 TQLKVINWE--TTLHIPS-QAKLS----REASDLILRLC-CGAEDRLGKNGADEIKAH  301 (376)
T ss_pred             HHHHHhccC--ccccCCC-CCCCC----HHHHHHHHHHh-cCHhhcCCCCCHHHHhCC
Confidence            211111111  1110000 01111    23456677766 5999999   88998875


No 255
>cd05632 STKc_GRK5 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 5. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK5 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK5 is widely expressed in many tissues. It associates with
Probab=99.93  E-value=1.6e-26  Score=185.05  Aligned_cols=159  Identities=25%  Similarity=0.364  Sum_probs=119.5

Q ss_pred             CCCCChHHHHHHHHHHHHHHhhhhcCCCCceEecCCCCCceEECCCCCceEeeecceeecCCCCCCCcccccccccccCC
Q 041793            4 CKILDWPKRFHIICGTARGVMYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDEIEGNTNRVIGTYGYMA   83 (224)
Q Consensus         4 ~~~l~~~~~~~i~~qi~~~l~~Lh~~~~~~i~H~dl~~~nil~~~~~~~kl~df~~~~~~~~~~~~~~~~~~~~~~~y~a   83 (224)
                      ...+++..+..++.|++.||.|||+.|   |+|+||+|.||+++.++.++++|||++.......   ......++..|+|
T Consensus        96 ~~~~~~~~~~~~~~ql~~~l~~lH~~~---iiH~dikp~Nili~~~~~~kl~Dfg~~~~~~~~~---~~~~~~g~~~~~a  169 (285)
T cd05632          96 NPGFEEERALFYAAEILCGLEDLHREN---TVYRDLKPENILLDDYGHIRISDLGLAVKIPEGE---SIRGRVGTVGYMA  169 (285)
T ss_pred             CCCCCHHHHHHHHHHHHHHHHHHHhCC---eeecCCCHHHEEECCCCCEEEecCCcceecCCCC---cccCCCCCcCccC
Confidence            346899999999999999999999999   9999999999999999999999999987643221   1123467889999


Q ss_pred             cccccCCCcccccceEehhHHHHHHHhcccCCCCcCCCccccccc-ccCCCccccCccccCCcCHHHHHHHHHHHHHhcc
Q 041793           84 PEYASDGKFSVKSDVFSFGILLLEIISGKKNRGFYHSDNKLNLIG-HVSMPSQLIDPCIQGSFNLVEVIRCIHIGLLCVQ  162 (224)
Q Consensus        84 PE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~  162 (224)
                      ||.+.+..++.++|+||||++++++++|..||...........+. .......    ......+    ..+.+|+..||+
T Consensus       170 PE~~~~~~~~~~~Di~slG~~l~~l~~g~~P~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~----~~~~~li~~~l~  241 (285)
T cd05632         170 PEVLNNQRYTLSPDYWGLGCLIYEMIEGQSPFRGRKEKVKREEVDRRVLETEE----VYSAKFS----EEAKSICKMLLT  241 (285)
T ss_pred             hHHhcCCCCCcccchHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhhhcccc----ccCccCC----HHHHHHHHHHcc
Confidence            999988889999999999999999999999986533221111111 1110000    0111111    235678889999


Q ss_pred             CCCCCCCC-----hHHHHH
Q 041793          163 QHPKDRPS-----MPSVIL  176 (224)
Q Consensus       163 ~dp~~Rps-----~~~v~~  176 (224)
                      .||++||+     +.+++.
T Consensus       242 ~~P~~R~~~~~~~~~~l~~  260 (285)
T cd05632         242 KDPKQRLGCQEEGAGEVKR  260 (285)
T ss_pred             CCHhHcCCCcccChHHHHc
Confidence            99999999     556655


No 256
>cd05574 STKc_phototropin_like Catalytic domain of Phototropin-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Phototropin-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The phototropin-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Included in this subfamily are plant phototropins and predominantly uncharacterized fungal STKs whose catalytic domains resemble the phototropin kinase domain. One protein from Neurospora crassa is called nrc-2. Phototropins are blue-light receptors that control responses such as phototropism, stromatal opening, and chloroplast movement in order to optimize the photosynthetic efficiency of plants. They are light-activated STKs that contain an N-termin
Probab=99.93  E-value=2.8e-26  Score=186.01  Aligned_cols=161  Identities=24%  Similarity=0.259  Sum_probs=119.8

Q ss_pred             CCCCChHHHHHHHHHHHHHHhhhhcCCCCceEecCCCCCceEECCCCCceEeeecceeecCCCCCC--------------
Q 041793            4 CKILDWPKRFHIICGTARGVMYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDEIE--------------   69 (224)
Q Consensus         4 ~~~l~~~~~~~i~~qi~~~l~~Lh~~~~~~i~H~dl~~~nil~~~~~~~kl~df~~~~~~~~~~~~--------------   69 (224)
                      +..+++..++.++.||+.||.|||+.|   ++|+||||+||+++.++.++|+|||++.........              
T Consensus        97 ~~~l~~~~~~~~~~qi~~~l~~lH~~~---i~H~dlkp~Nili~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~  173 (316)
T cd05574          97 GKCLSEEVARFYAAEVLLALEYLHLLG---IVYRDLKPENILLHESGHIMLSDFDLSKQSDVEPPPVSKALRKGSRRSSV  173 (316)
T ss_pred             CCccCHHHHHHHHHHHHHHHHHHHHCC---eeccCCChHHeEEcCCCCEEEeecchhhcccccccccccccccccccccc
Confidence            457899999999999999999999999   999999999999999999999999998754321110              


Q ss_pred             -------------CcccccccccccCCcccccCCCcccccceEehhHHHHHHHhcccCCCCcCCCcccccccccCCCccc
Q 041793           70 -------------GNTNRVIGTYGYMAPEYASDGKFSVKSDVFSFGILLLEIISGKKNRGFYHSDNKLNLIGHVSMPSQL  136 (224)
Q Consensus        70 -------------~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~  136 (224)
                                   .......++..|+|||.+.+..++.++|+||||+++|++++|+.||...........+  ...... 
T Consensus       174 ~~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Di~slG~ll~~l~~g~~pf~~~~~~~~~~~~--~~~~~~-  250 (316)
T cd05574         174 NSIPSETFSEEPSFRSNSFVGTEEYIAPEVISGDGHGSAVDWWTLGILLYEMLYGTTPFKGSNRDETFSNI--LKKEVT-  250 (316)
T ss_pred             cccchhhhcccccCCCCCCcCccCCcCHHHHcCCCCCchHHHHHHHHHHHHHhhCCCCCCCCchHHHHHHH--hcCCcc-
Confidence                         0011235677899999998888899999999999999999999998644322111110  100000 


Q ss_pred             cCccccCCcCHHHHHHHHHHHHHhccCCCCCCCC----hHHHHH
Q 041793          137 IDPCIQGSFNLVEVIRCIHIGLLCVQQHPKDRPS----MPSVIL  176 (224)
Q Consensus       137 ~~~~~~~~~~~~~~~~~~~li~~cl~~dp~~Rps----~~~v~~  176 (224)
                          .....  .....+.+++.+||+.||++||+    ++++++
T Consensus       251 ----~~~~~--~~~~~~~~li~~~l~~~p~~R~s~~~~~~~ll~  288 (316)
T cd05574         251 ----FPGSP--PVSSSARDLIRKLLVKDPSKRLGSKRGAAEIKQ  288 (316)
T ss_pred             ----CCCcc--ccCHHHHHHHHHHccCCHhHCCCchhhHHHHHc
Confidence                00010  02245778999999999999999    666665


No 257
>KOG0983 consensus Mitogen-activated protein kinase (MAPK) kinase MKK7/JNKK2 [Signal transduction mechanisms]
Probab=99.93  E-value=1.8e-26  Score=175.92  Aligned_cols=191  Identities=21%  Similarity=0.328  Sum_probs=136.0

Q ss_pred             CCCCCChHHHHHHHHHHHHHHhhhhcCCCCceEecCCCCCceEECCCCCceEeeecceeecCCCCCCCcccccccccccC
Q 041793            3 RCKILDWPKRFHIICGTARGVMYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDEIEGNTNRVIGTYGYM   82 (224)
Q Consensus         3 ~~~~l~~~~~~~i~~qi~~~l~~Lh~~~~~~i~H~dl~~~nil~~~~~~~kl~df~~~~~~~~~~~~~~~~~~~~~~~y~   82 (224)
                      ..+++++.-.=++...++.||.||-++.  .|+|||+||+|||+|..|++||+|||++.++.+.   ....+..|.+.|+
T Consensus       184 ik~piPE~ilGk~tva~v~AL~YLKeKH--~viHRDvKPSNILlDe~GniKlCDFGIsGrlvdS---kAhtrsAGC~~YM  258 (391)
T KOG0983|consen  184 IKGPIPERILGKMTVAIVKALYYLKEKH--GVIHRDVKPSNILLDERGNIKLCDFGISGRLVDS---KAHTRSAGCAAYM  258 (391)
T ss_pred             hcCCchHHhhhhhHHHHHHHHHHHHHhc--ceeecccCccceEEccCCCEEeecccccceeecc---cccccccCCcccc
Confidence            3567778777888899999999998774  4999999999999999999999999999887543   2334457788999


Q ss_pred             CcccccC---CCcccccceEehhHHHHHHHhcccCCCCcCCCcccccccccCCCccccCccccCCcCHHHHHHHHHHHHH
Q 041793           83 APEYASD---GKFSVKSDVFSFGILLLEIISGKKNRGFYHSDNKLNLIGHVSMPSQLIDPCIQGSFNLVEVIRCIHIGLL  159 (224)
Q Consensus        83 aPE~~~~---~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~  159 (224)
                      |||.+.-   ..|+..+||||||+.++||.+|+.||.....+  .+.+..+..  ..+ ++++....  -...+++++..
T Consensus       259 aPERidp~~~~kYDiRaDVWSlGITlveLaTg~yPy~~c~td--Fe~ltkvln--~eP-P~L~~~~g--FSp~F~~fv~~  331 (391)
T KOG0983|consen  259 APERIDPPDKPKYDIRADVWSLGITLVELATGQYPYKGCKTD--FEVLTKVLN--EEP-PLLPGHMG--FSPDFQSFVKD  331 (391)
T ss_pred             CccccCCCCCCccchhhhhhhhccchhhhhcccCCCCCCCcc--HHHHHHHHh--cCC-CCCCcccC--cCHHHHHHHHH
Confidence            9999853   45789999999999999999999998764432  222222221  111 22222211  12346778889


Q ss_pred             hccCCCCCCCChHHHHHHhc-cCCCCCCCCCCCCccCCccccCCCCC
Q 041793          160 CVQQHPKDRPSMPSVILMLG-SEIVLPQPKQPGYLEDRKSTRQDYSS  205 (224)
Q Consensus       160 cl~~dp~~Rps~~~v~~~L~-~~~~~~~~~~p~~~~~~~~~~~~~~~  205 (224)
                      ||+.|+.+||...++++.-- ........+.+.||...+....+...
T Consensus       332 CL~kd~r~RP~Y~~Ll~h~Fi~~ye~a~~dVa~WF~dV~~~~~~~~~  378 (391)
T KOG0983|consen  332 CLTKDHRKRPKYNKLLEHPFIKRYETAEVDVASWFKDVMAKTESPRT  378 (391)
T ss_pred             HhhcCcccCcchHHHhcCcceeecchhhccHHHHHHHHHhccccccc
Confidence            99999999999999977421 11222234566677766655544433


No 258
>cd06640 STKc_MST4 Catalytic domain of the Protein Serine/Threonine Kinase, Mammalian Ste20-like protein kinase 4. Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 4 (MST4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MST4 is sometimes referred to as MASK (MST3 and SOK1-related kinase). It plays a role in mitogen-activated protein kinase (MAPK) signaling during cytoskeletal rearrangement, morphogenesis, and apoptosis. It influences cell growth and transformation by modulating the extracellular signal-regulated kinase (ERK) pathway. MST4 may also play a role in tumor formation and progression. It localizes in the Golgi apparatus by inter
Probab=99.93  E-value=4.5e-26  Score=181.54  Aligned_cols=158  Identities=27%  Similarity=0.399  Sum_probs=121.9

Q ss_pred             CCCChHHHHHHHHHHHHHHhhhhcCCCCceEecCCCCCceEECCCCCceEeeecceeecCCCCCCCcccccccccccCCc
Q 041793            5 KILDWPKRFHIICGTARGVMYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDEIEGNTNRVIGTYGYMAP   84 (224)
Q Consensus         5 ~~l~~~~~~~i~~qi~~~l~~Lh~~~~~~i~H~dl~~~nil~~~~~~~kl~df~~~~~~~~~~~~~~~~~~~~~~~y~aP   84 (224)
                      +++++.++..++.|++.||.|||+.+   ++|+||+|+||+++.++.++++|||++........  ......++..|+||
T Consensus        96 ~~l~~~~~~~~~~~l~~~l~~lh~~~---ivH~dl~p~Nil~~~~~~~~l~dfg~~~~~~~~~~--~~~~~~~~~~y~ap  170 (277)
T cd06640          96 GPFDEFQIATMLKEILKGLDYLHSEK---KIHRDIKAANVLLSEQGDVKLADFGVAGQLTDTQI--KRNTFVGTPFWMAP  170 (277)
T ss_pred             CCCCHHHHHHHHHHHHHHHHHHHhCC---ccCcCCChhhEEEcCCCCEEEcccccceeccCCcc--ccccccCcccccCH
Confidence            46889999999999999999999999   99999999999999999999999999976543221  12223567789999


Q ss_pred             ccccCCCcccccceEehhHHHHHHHhcccCCCCcCCCcccccccccCCCccccCccccCCcCHHHHHHHHHHHHHhccCC
Q 041793           85 EYASDGKFSVKSDVFSFGILLLEIISGKKNRGFYHSDNKLNLIGHVSMPSQLIDPCIQGSFNLVEVIRCIHIGLLCVQQH  164 (224)
Q Consensus        85 E~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~d  164 (224)
                      |.+.+..++.++|+||||+++|+|++|+.||................          ...........+.+++.+||+.+
T Consensus       171 E~~~~~~~~~~~Dv~slG~il~el~tg~~p~~~~~~~~~~~~~~~~~----------~~~~~~~~~~~~~~li~~~l~~~  240 (277)
T cd06640         171 EVIQQSAYDSKADIWSLGITAIELAKGEPPNSDMHPMRVLFLIPKNN----------PPTLTGEFSKPFKEFIDACLNKD  240 (277)
T ss_pred             hHhccCCCccHHHHHHHHHHHHHHHHCCCCCCCcChHhHhhhhhcCC----------CCCCchhhhHHHHHHHHHHcccC
Confidence            99988888999999999999999999999975433221111110000          01111223345778999999999


Q ss_pred             CCCCCChHHHHHH
Q 041793          165 PKDRPSMPSVILM  177 (224)
Q Consensus       165 p~~Rps~~~v~~~  177 (224)
                      |++||++.++++.
T Consensus       241 p~~Rp~~~~il~~  253 (277)
T cd06640         241 PSFRPTAKELLKH  253 (277)
T ss_pred             cccCcCHHHHHhC
Confidence            9999999999765


No 259
>cd06615 PKc_MEK Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase. Protein kinases (PKs), MAP/ERK kinase (MEK) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK1 and MEK2 are dual-specificity PKs that phosphorylate and activate the down
Probab=99.93  E-value=3e-26  Score=185.39  Aligned_cols=168  Identities=22%  Similarity=0.327  Sum_probs=120.2

Q ss_pred             CCCCChHHHHHHHHHHHHHHhhhhc-CCCCceEecCCCCCceEECCCCCceEeeecceeecCCCCCCCcccccccccccC
Q 041793            4 CKILDWPKRFHIICGTARGVMYLHQ-DSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDEIEGNTNRVIGTYGYM   82 (224)
Q Consensus         4 ~~~l~~~~~~~i~~qi~~~l~~Lh~-~~~~~i~H~dl~~~nil~~~~~~~kl~df~~~~~~~~~~~~~~~~~~~~~~~y~   82 (224)
                      .+.+++..+..++.||+.||.|||+ .+   ++|+||+|.||+++.++.++++|||++.......    .....++..|+
T Consensus        93 ~~~~~~~~~~~~~~~i~~~l~~lH~~~~---i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~~~----~~~~~~~~~~~  165 (308)
T cd06615          93 AGRIPENILGKISIAVLRGLTYLREKHK---IMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSM----ANSFVGTRSYM  165 (308)
T ss_pred             cCCCCHHHHHHHHHHHHHHHHHHHhhCC---EEECCCChHHEEEecCCcEEEccCCCcccccccc----cccCCCCcCcc
Confidence            4668899999999999999999997 47   9999999999999999999999999886543221    22345678999


Q ss_pred             CcccccCCCcccccceEehhHHHHHHHhcccCCCCcCCCcccccccccCCCcc---------------------------
Q 041793           83 APEYASDGKFSVKSDVFSFGILLLEIISGKKNRGFYHSDNKLNLIGHVSMPSQ---------------------------  135 (224)
Q Consensus        83 aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~---------------------------  135 (224)
                      |||.+.+..++.++|+||||++++++++|..||....................                           
T Consensus       166 aPE~~~~~~~~~~~DiwslG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  245 (308)
T cd06615         166 SPERLQGTHYTVQSDIWSLGLSLVEMAIGRYPIPPPDAKELEAMFGRPVSEGEAKESHRPVSGHPPDSPRPMAIFELLDY  245 (308)
T ss_pred             ChhHhcCCCCCccchHHHHHHHHHHHHhCCCCCCCcchhhHHHhhcCccccccccCCcccccCCCCCccchhhHHHHHHH
Confidence            99999888889999999999999999999999854332211111110000000                           


Q ss_pred             ccCccccCCcCHHHHHHHHHHHHHhccCCCCCCCChHHHHHHh
Q 041793          136 LIDPCIQGSFNLVEVIRCIHIGLLCVQQHPKDRPSMPSVILML  178 (224)
Q Consensus       136 ~~~~~~~~~~~~~~~~~~~~li~~cl~~dp~~Rps~~~v~~~L  178 (224)
                      ......+..........+.+++.+||..||++||++++|++..
T Consensus       246 ~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~ll~~~  288 (308)
T cd06615         246 IVNEPPPKLPSGAFSDEFQDFVDKCLKKNPKERADLKELTKHP  288 (308)
T ss_pred             HhcCCCccCcCcccCHHHHHHHHHHccCChhhCcCHHHHhcCh
Confidence            0000000000000112467899999999999999999997763


No 260
>cd07873 STKc_PCTAIRE1 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-1 kinase. Serine/Threonine Kinases (STKs), PCTAIRE-1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-1 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-1 is expressed ubiquitously and is localized in the cytoplasm. Its kinase activity is cell cycle dependent and peaks at the S and G2 phases. PCTAIRE-1 is highly expressed in the brain and may pl
Probab=99.93  E-value=1e-26  Score=187.44  Aligned_cols=168  Identities=19%  Similarity=0.223  Sum_probs=117.9

Q ss_pred             CCCCChHHHHHHHHHHHHHHhhhhcCCCCceEecCCCCCceEECCCCCceEeeecceeecCCCCCCCcccccccccccCC
Q 041793            4 CKILDWPKRFHIICGTARGVMYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDEIEGNTNRVIGTYGYMA   83 (224)
Q Consensus         4 ~~~l~~~~~~~i~~qi~~~l~~Lh~~~~~~i~H~dl~~~nil~~~~~~~kl~df~~~~~~~~~~~~~~~~~~~~~~~y~a   83 (224)
                      ...+++..+..++.||+.||.|||+.+   ++|+||+|+||+++.++.++++|||++........  ......++..|+|
T Consensus        98 ~~~~~~~~~~~~~~qi~~aL~~lH~~~---i~H~dlkp~Nil~~~~~~~kl~dfg~~~~~~~~~~--~~~~~~~~~~y~~  172 (301)
T cd07873          98 GNSINMHNVKLFLFQLLRGLNYCHRRK---VLHRDLKPQNLLINERGELKLADFGLARAKSIPTK--TYSNEVVTLWYRP  172 (301)
T ss_pred             CCCCCHHHHHHHHHHHHHHHHHHHhCC---eeCCCCCHHHEEECCCCcEEECcCcchhccCCCCC--cccccceeecccC
Confidence            456889999999999999999999999   99999999999999999999999999876432211  1122345778999


Q ss_pred             cccccCC-CcccccceEehhHHHHHHHhcccCCCCcCCCcccccccc------------cCCCccccCccccCC------
Q 041793           84 PEYASDG-KFSVKSDVFSFGILLLEIISGKKNRGFYHSDNKLNLIGH------------VSMPSQLIDPCIQGS------  144 (224)
Q Consensus        84 PE~~~~~-~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~------------~~~~~~~~~~~~~~~------  144 (224)
                      ||.+.+. .++.++|+||||+++|+|++|+.||...........+..            ............+..      
T Consensus       173 PE~~~~~~~~~~~~Dv~slG~~l~el~tg~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  252 (301)
T cd07873         173 PDILLGSTDYSTQIDMWGVGCIFYEMSTGRPLFPGSTVEEQLHFIFRILGTPTEETWPGILSNEEFKSYNYPKYRADCLH  252 (301)
T ss_pred             cHHHhCCCCCccHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHcCCCChhhchhhhccccccccccCccccccHH
Confidence            9988654 467899999999999999999999865432111100000            000000000000000      


Q ss_pred             -cCHHHHHHHHHHHHHhccCCCCCCCChHHHHH
Q 041793          145 -FNLVEVIRCIHIGLLCVQQHPKDRPSMPSVIL  176 (224)
Q Consensus       145 -~~~~~~~~~~~li~~cl~~dp~~Rps~~~v~~  176 (224)
                       ....-...+.+||.+||+.||.+|||++++++
T Consensus       253 ~~~~~~~~~~~~li~~ml~~dp~~R~t~~eil~  285 (301)
T cd07873         253 NHAPRLDSDGAELLSKLLQFEGRKRISAEEAMK  285 (301)
T ss_pred             hhcCCCCHHHHHHHHHHhcCCcccCcCHHHHhc
Confidence             00000124568999999999999999999986


No 261
>cd06648 STKc_PAK_II Catalytic domain of the Protein Serine/Threonine Kinase, Group II p21-activated kinase. Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, Group II, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. Group II PAKs, also called non-conventional PAKs, include PAK4, PAK5, and PAK6. Group II PAKs contain PBD (p21-binding domain) and catalytic domains, but lack other motifs foun
Probab=99.93  E-value=2.9e-26  Score=183.45  Aligned_cols=159  Identities=21%  Similarity=0.322  Sum_probs=119.4

Q ss_pred             CCCChHHHHHHHHHHHHHHhhhhcCCCCceEecCCCCCceEECCCCCceEeeecceeecCCCCCCCcccccccccccCCc
Q 041793            5 KILDWPKRFHIICGTARGVMYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDEIEGNTNRVIGTYGYMAP   84 (224)
Q Consensus         5 ~~l~~~~~~~i~~qi~~~l~~Lh~~~~~~i~H~dl~~~nil~~~~~~~kl~df~~~~~~~~~~~~~~~~~~~~~~~y~aP   84 (224)
                      +.+++.+++.++.|++.||+|||+.|   ++||||+|+||+++.++.++++|||.+.........  .....++..|++|
T Consensus       110 ~~~~~~~~~~~~~ql~~~l~~lH~~~---i~H~dl~p~Nil~~~~~~~~l~d~g~~~~~~~~~~~--~~~~~~~~~y~aP  184 (285)
T cd06648         110 TRMNEEQIATVCLAVLKALSFLHAQG---VIHRDIKSDSILLTSDGRVKLSDFGFCAQVSKEVPR--RKSLVGTPYWMAP  184 (285)
T ss_pred             CCCCHHHHHHHHHHHHHHHHHHHhCC---eecCCCChhhEEEcCCCcEEEcccccchhhccCCcc--cccccCCccccCH
Confidence            46889999999999999999999999   999999999999999999999999987654332211  1223567889999


Q ss_pred             ccccCCCcccccceEehhHHHHHHHhcccCCCCcCCCcccccccccCCCccccCccccCCcCHHHHHHHHHHHHHhccCC
Q 041793           85 EYASDGKFSVKSDVFSFGILLLEIISGKKNRGFYHSDNKLNLIGHVSMPSQLIDPCIQGSFNLVEVIRCIHIGLLCVQQH  164 (224)
Q Consensus        85 E~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~d  164 (224)
                      |.+.+..++.++|+||||++++++++|+.||................      .+......  .....+.+++.+||+.+
T Consensus       185 E~~~~~~~~~~~Dv~slGv~l~ell~g~~p~~~~~~~~~~~~~~~~~------~~~~~~~~--~~~~~l~~li~~~l~~~  256 (285)
T cd06648         185 EVISRLPYGTEVDIWSLGIMVIEMVDGEPPYFNEPPLQAMKRIRDNL------PPKLKNLH--KVSPRLRSFLDRMLVRD  256 (285)
T ss_pred             HHhcCCCCCCcccHHHHHHHHHHHHhCCCCCcCCCHHHHHHHHHhcC------CCCCcccc--cCCHHHHHHHHHHcccC
Confidence            99988888999999999999999999999975422211111111110      00111110  01135778999999999


Q ss_pred             CCCCCChHHHHH
Q 041793          165 PKDRPSMPSVIL  176 (224)
Q Consensus       165 p~~Rps~~~v~~  176 (224)
                      |++||++.++++
T Consensus       257 p~~Rpt~~~il~  268 (285)
T cd06648         257 PAQRATAAELLN  268 (285)
T ss_pred             hhhCcCHHHHcc
Confidence            999999999975


No 262
>cd07843 STKc_CDC2L1 Catalytic domain of the Serine/Threonine Kinase, Cell Division Cycle 2-like 1. Serine/Threonine Kinases (STKs), Cell Division Cycle 2-like 1 (CDC2L1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDC2L1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDC2L1, also called PITSLRE, exists in different isoforms which are named using the alias CDK11(p). The CDC2L1 gene produces two protein products, CDK11(p110) and CDK11(p58). CDC2L1 is also represented by the caspase-processed CDK11(p46). CDK11(p110), the
Probab=99.93  E-value=1.7e-26  Score=185.30  Aligned_cols=167  Identities=26%  Similarity=0.305  Sum_probs=118.8

Q ss_pred             CCCChHHHHHHHHHHHHHHhhhhcCCCCceEecCCCCCceEECCCCCceEeeecceeecCCCCCCCcccccccccccCCc
Q 041793            5 KILDWPKRFHIICGTARGVMYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDEIEGNTNRVIGTYGYMAP   84 (224)
Q Consensus         5 ~~l~~~~~~~i~~qi~~~l~~Lh~~~~~~i~H~dl~~~nil~~~~~~~kl~df~~~~~~~~~~~~~~~~~~~~~~~y~aP   84 (224)
                      ..+++.+++.++.||+.||.|||+.+   ++|+||+|+||+++.++.++|+|||++........  ......++..|+||
T Consensus       101 ~~l~~~~~~~i~~qi~~aL~~LH~~~---i~H~dl~p~nili~~~~~~~l~d~g~~~~~~~~~~--~~~~~~~~~~~~aP  175 (293)
T cd07843         101 QPFLQSEVKCLMLQLLSGVAHLHDNW---ILHRDLKTSNLLLNNRGILKICDFGLAREYGSPLK--PYTQLVVTLWYRAP  175 (293)
T ss_pred             CCCCHHHHHHHHHHHHHHHHHHHHCC---eeeccCCHHHEEECCCCcEEEeecCceeeccCCcc--ccccccccccccCc
Confidence            46899999999999999999999999   99999999999999999999999999887644321  11223457789999


Q ss_pred             ccccCCC-cccccceEehhHHHHHHHhcccCCCCcCCCcccccc-cccC------------CC-------ccccCccccC
Q 041793           85 EYASDGK-FSVKSDVFSFGILLLEIISGKKNRGFYHSDNKLNLI-GHVS------------MP-------SQLIDPCIQG  143 (224)
Q Consensus        85 E~~~~~~-~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~-~~~~------------~~-------~~~~~~~~~~  143 (224)
                      |.+.+.. ++.++|+||||+++++|++|..||...........+ ....            .+       ..........
T Consensus       176 E~~~~~~~~~~~~Di~slG~~l~~l~~g~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  255 (293)
T cd07843         176 ELLLGAKEYSTAIDMWSVGCIFAELLTKKPLFPGKSEIDQLNKIFKLLGTPTEKIWPGFSELPGAKKKTFTKYPYNQLRK  255 (293)
T ss_pred             hhhcCCccccchhhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCchHHHHHhhccchhcccccccccchhhhc
Confidence            9886544 588999999999999999999998644322111100 0000            00       0000000000


Q ss_pred             CcCHH-HHHHHHHHHHHhccCCCCCCCChHHHHH
Q 041793          144 SFNLV-EVIRCIHIGLLCVQQHPKDRPSMPSVIL  176 (224)
Q Consensus       144 ~~~~~-~~~~~~~li~~cl~~dp~~Rps~~~v~~  176 (224)
                      ..... ....+.++|.+||+.||++|||+.|++.
T Consensus       256 ~~~~~~~~~~~~~li~~~l~~~p~~R~t~~ell~  289 (293)
T cd07843         256 KFPALSLSDNGFDLLNRLLTYDPAKRISAEDALK  289 (293)
T ss_pred             cccccCCChHHHHHHHHHhccCccccCCHHHHhc
Confidence            01100 1234678999999999999999999975


No 263
>cd06629 STKc_MAPKKK_Bck1_like Catalytic domain of fungal Bck1-like MAP Kinase Kinase Kinases. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Bck1-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Saccharomyces cerevisiae Bck1 and Schizosaccharomyces pombe Mkh1, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Budding yeast Bck1 is part of the cell inte
Probab=99.93  E-value=5.5e-26  Score=180.35  Aligned_cols=165  Identities=25%  Similarity=0.359  Sum_probs=119.1

Q ss_pred             CCCChHHHHHHHHHHHHHHhhhhcCCCCceEecCCCCCceEECCCCCceEeeecceeecCCCCCCCcccccccccccCCc
Q 041793            5 KILDWPKRFHIICGTARGVMYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDEIEGNTNRVIGTYGYMAP   84 (224)
Q Consensus         5 ~~l~~~~~~~i~~qi~~~l~~Lh~~~~~~i~H~dl~~~nil~~~~~~~kl~df~~~~~~~~~~~~~~~~~~~~~~~y~aP   84 (224)
                      +.+++..+..++.||+.||.|||+.+   ++|+||+|+||+++.++.++++|||++................++..|++|
T Consensus       103 ~~l~~~~~~~~~~qi~~~l~~lH~~~---i~H~dl~~~nil~~~~~~~~l~d~~~~~~~~~~~~~~~~~~~~~~~~y~~P  179 (272)
T cd06629         103 GRFEEQLVRFFTEQVLEGLAYLHSKG---ILHRDLKADNLLVDADGICKISDFGISKKSDDIYDNDQNMSMQGSVFWMAP  179 (272)
T ss_pred             cCCCHHHHHHHHHHHHHHHHHHhhCC---eeecCCChhhEEEcCCCeEEEeeccccccccccccccccccccCCccccCH
Confidence            57899999999999999999999999   999999999999999999999999998764332111112223567789999


Q ss_pred             ccccCCC--cccccceEehhHHHHHHHhcccCCCCcCCCcccccccccCCCccccCccccCCcCHHHHHHHHHHHHHhcc
Q 041793           85 EYASDGK--FSVKSDVFSFGILLLEIISGKKNRGFYHSDNKLNLIGHVSMPSQLIDPCIQGSFNLVEVIRCIHIGLLCVQ  162 (224)
Q Consensus        85 E~~~~~~--~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~  162 (224)
                      |.+....  ++.++|+||||++++++++|..||.................... .+......    ....+.+++.+||+
T Consensus       180 E~~~~~~~~~~~~~Dv~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~----~~~~~~~li~~~l~  254 (272)
T cd06629         180 EVIHSYSQGYSAKVDIWSLGCVVLEMFAGRRPWSDEEAIAAMFKLGNKRSAPP-IPPDVSMN----LSPVALDFLNACFT  254 (272)
T ss_pred             HHhccccCCCCccchhHHHHHHHHHHHhCCCCCcCcchHHHHHHhhccccCCc-CCcccccc----CCHHHHHHHHHHhc
Confidence            9987654  78999999999999999999999753222111100000000011 11111111    12356778899999


Q ss_pred             CCCCCCCChHHHHHH
Q 041793          163 QHPKDRPSMPSVILM  177 (224)
Q Consensus       163 ~dp~~Rps~~~v~~~  177 (224)
                      .+|++||++++|++.
T Consensus       255 ~~p~~Rps~~~il~~  269 (272)
T cd06629         255 INPDNRPTARELLQH  269 (272)
T ss_pred             CChhhCCCHHHHhhC
Confidence            999999999999763


No 264
>cd08216 PK_STRAD Pseudokinase domain of STE20-related kinase adapter protein. Protein Kinase family, STE20-related kinase adapter protein (STRAD) subfamily, pseudokinase domain. The STRAD subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hyperpigmentation of the buc
Probab=99.93  E-value=3e-26  Score=185.63  Aligned_cols=168  Identities=21%  Similarity=0.293  Sum_probs=118.8

Q ss_pred             CCCChHHHHHHHHHHHHHHhhhhcCCCCceEecCCCCCceEECCCCCceEeeecceeecCCCCC-----CCccccccccc
Q 041793            5 KILDWPKRFHIICGTARGVMYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDEI-----EGNTNRVIGTY   79 (224)
Q Consensus         5 ~~l~~~~~~~i~~qi~~~l~~Lh~~~~~~i~H~dl~~~nil~~~~~~~kl~df~~~~~~~~~~~-----~~~~~~~~~~~   79 (224)
                      ..+++..+..++.||+.||.|||+.+   |+|+||+|+||+++.++.++++||+.+........     ........++.
T Consensus        96 ~~~~~~~~~~~~~~l~~~L~~LH~~~---ivH~dlk~~Nili~~~~~~kl~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~  172 (314)
T cd08216          96 EGLPELAIAFILKDVLNALDYIHSKG---FIHRSVKASHILLSGDGKVVLSGLRYSVSMIKHGKRQRVVHDFPKSSVKNL  172 (314)
T ss_pred             cCCCHHHHHHHHHHHHHHHHHHHHCC---eecCCCCcceEEEecCCceEEecCccceeeccccccccccccccccccccc
Confidence            46889999999999999999999999   99999999999999999999999998875532211     11112234566


Q ss_pred             ccCCcccccC--CCcccccceEehhHHHHHHHhcccCCCCcCCCccccccccc-----------CCCcc----------c
Q 041793           80 GYMAPEYASD--GKFSVKSDVFSFGILLLEIISGKKNRGFYHSDNKLNLIGHV-----------SMPSQ----------L  136 (224)
Q Consensus        80 ~y~aPE~~~~--~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~-----------~~~~~----------~  136 (224)
                      .|+|||.+.+  ..++.++|+||||++++++++|+.||........  .....           ..+..          .
T Consensus       173 ~y~aPE~~~~~~~~~~~~~Diws~G~il~el~~g~~pf~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  250 (314)
T cd08216         173 PWLSPEVLQQNLQGYNEKSDIYSVGITACELANGHVPFKDMPATQM--LLEKVRGTVPCLLDKSTYPLYEDSMSQSRSSN  250 (314)
T ss_pred             cccCHHHhcCCCCCCCcchhHHHHHHHHHHHHhCCCCCCCCCHHHH--HHHHHhccCccccccCchhhhcCCcCcccccc
Confidence            8999999865  3578899999999999999999999864332111  00000           00000          0


Q ss_pred             cCc----cccCCcCHHHHHHHHHHHHHhccCCCCCCCChHHHHHH
Q 041793          137 IDP----CIQGSFNLVEVIRCIHIGLLCVQQHPKDRPSMPSVILM  177 (224)
Q Consensus       137 ~~~----~~~~~~~~~~~~~~~~li~~cl~~dp~~Rps~~~v~~~  177 (224)
                      .+.    .............+.+++.+||+.||++|||++++++.
T Consensus       251 ~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~ll~~  295 (314)
T cd08216         251 EHPNNRDSVDHPYTRTFSEHFHQFVELCLQRDPESRPSASQLLNH  295 (314)
T ss_pred             cccchhhhhhcchhhHHHHHHHHHHHHHhhcCCCcCcCHHHHhcC
Confidence            000    00011111122457789999999999999999999764


No 265
>cd05122 PKc_STE Catalytic domain of STE family Protein Kinases. Protein Kinases (PKs), STE family, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The STE family is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases (STKs), protein tyrosine kinases (PTKs), RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This family is composed of STKs, and some dual-specificity PKs that phosphorylate both threonine and tyrosine residues of target proteins. Most members are kinases involved in mitogen-activated protein kinase (MAPK) signaling cascades, acting as MAPK kinases (MAPKKs), MAPK kinase kinases (MAPKKKs), or MAPK kinase kinase kinases (MAP4Ks). The MAPK signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core 
Probab=99.93  E-value=4.1e-26  Score=178.28  Aligned_cols=158  Identities=28%  Similarity=0.408  Sum_probs=121.7

Q ss_pred             CCCChHHHHHHHHHHHHHHhhhhcCCCCceEecCCCCCceEECCCCCceEeeecceeecCCCCCCCcccccccccccCCc
Q 041793            5 KILDWPKRFHIICGTARGVMYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDEIEGNTNRVIGTYGYMAP   84 (224)
Q Consensus         5 ~~l~~~~~~~i~~qi~~~l~~Lh~~~~~~i~H~dl~~~nil~~~~~~~kl~df~~~~~~~~~~~~~~~~~~~~~~~y~aP   84 (224)
                      +.+++..++.++.|++.||.+||+.|   ++|+||+|+||+++.++.++|.|||.+........   .....++..|++|
T Consensus        93 ~~~~~~~~~~i~~~i~~~l~~lh~~~---i~h~dl~p~ni~i~~~~~~~l~d~~~~~~~~~~~~---~~~~~~~~~~~~P  166 (253)
T cd05122          93 QTLTESQIAYVCKELLKGLEYLHSNG---IIHRDIKAANILLTSDGEVKLIDFGLSAQLSDTKA---RNTMVGTPYWMAP  166 (253)
T ss_pred             CCCCHHHHHHHHHHHHHHHHHhhcCC---EecCCCCHHHEEEccCCeEEEeecccccccccccc---ccceecCCcccCH
Confidence            57899999999999999999999999   99999999999999999999999999877644321   2234567789999


Q ss_pred             ccccCCCcccccceEehhHHHHHHHhcccCCCCcCCCcccccccccCCCccccCccccCCcCHHHHHHHHHHHHHhccCC
Q 041793           85 EYASDGKFSVKSDVFSFGILLLEIISGKKNRGFYHSDNKLNLIGHVSMPSQLIDPCIQGSFNLVEVIRCIHIGLLCVQQH  164 (224)
Q Consensus        85 E~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~d  164 (224)
                      |.+.+...+.+.|+||||++++++++|..||................. ...     ....  .....+.+++.+||+.|
T Consensus       167 E~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~-~~~-----~~~~--~~~~~~~~~i~~~l~~~  238 (253)
T cd05122         167 EVINGKPYDYKADIWSLGITAIELAEGKPPYSELPPMKALFKIATNGP-PGL-----RNPE--KWSDEFKDFLKKCLQKN  238 (253)
T ss_pred             HHHcCCCCCccccHHHHHHHHHHHHhCCCCCCCCchHHHHHHHHhcCC-CCc-----Cccc--ccCHHHHHHHHHHccCC
Confidence            999888888999999999999999999999865432222221111110 010     0011  00234778889999999


Q ss_pred             CCCCCChHHHHH
Q 041793          165 PKDRPSMPSVIL  176 (224)
Q Consensus       165 p~~Rps~~~v~~  176 (224)
                      |++|||+.++++
T Consensus       239 p~~R~t~~~~l~  250 (253)
T cd05122         239 PEKRPTAEQLLK  250 (253)
T ss_pred             hhhCCCHHHHhc
Confidence            999999999875


No 266
>cd05627 STKc_NDR2 Catalytic domain of the Protein Serine/Threonine Kinase, Nuclear Dbf2-Related kinase 2. Serine/Threonine Kinases (STKs), NDR kinase subfamily, NDR2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. Higher eukaryotes contain two NDR isoforms, NDR1 and NDR2. Both isoforms play a role in proper centrosome duplication. In addition, NDR2 plays a role in regul
Probab=99.93  E-value=1.5e-26  Score=191.08  Aligned_cols=163  Identities=21%  Similarity=0.285  Sum_probs=116.6

Q ss_pred             CCCCCChHHHHHHHHHHHHHHhhhhcCCCCceEecCCCCCceEECCCCCceEeeecceeecCCCCCC-------------
Q 041793            3 RCKILDWPKRFHIICGTARGVMYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDEIE-------------   69 (224)
Q Consensus         3 ~~~~l~~~~~~~i~~qi~~~l~~Lh~~~~~~i~H~dl~~~nil~~~~~~~kl~df~~~~~~~~~~~~-------------   69 (224)
                      +.+.+++..+..++.||+.||.|||+.|   |+||||||+||+++.++.++|+|||++.........             
T Consensus        94 ~~~~l~~~~~~~~~~qi~~~L~~lH~~g---ivHrDLkp~NIli~~~~~vkL~DfG~~~~~~~~~~~~~~~~~~~~~~~~  170 (360)
T cd05627          94 KKDTLSEEATQFYIAETVLAIDAIHQLG---FIHRDIKPDNLLLDAKGHVKLSDFGLCTGLKKAHRTEFYRNLTHNPPSD  170 (360)
T ss_pred             hcCCCCHHHHHHHHHHHHHHHHHHHHCC---eEccCCCHHHEEECCCCCEEEeeccCCcccccccccccccccccCCccc
Confidence            3467899999999999999999999999   999999999999999999999999998754221100             


Q ss_pred             --------------------CcccccccccccCCcccccCCCcccccceEehhHHHHHHHhcccCCCCcCCCcccccccc
Q 041793           70 --------------------GNTNRVIGTYGYMAPEYASDGKFSVKSDVFSFGILLLEIISGKKNRGFYHSDNKLNLIGH  129 (224)
Q Consensus        70 --------------------~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~  129 (224)
                                          .......|+..|+|||++.+..++.++|+|||||++|+|++|..||...........+..
T Consensus       171 ~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~DiwSlGvilyel~tG~~Pf~~~~~~~~~~~i~~  250 (360)
T cd05627         171 FSFQNMNSKRKAETWKKNRRQLAYSTVGTPDYIAPEVFMQTGYNKLCDWWSLGVIMYEMLIGYPPFCSETPQETYRKVMN  250 (360)
T ss_pred             ccccccccccccccccccccccccccCCCccccCHHHHcCCCCCCcceeccccceeeecccCCCCCCCCCHHHHHHHHHc
Confidence                                001134688999999999999999999999999999999999999865443322111111


Q ss_pred             cCCCccccCccccCCcCHHHHHHHHHHHHHhccCCCCCCCC---hHHHHH
Q 041793          130 VSMPSQLIDPCIQGSFNLVEVIRCIHIGLLCVQQHPKDRPS---MPSVIL  176 (224)
Q Consensus       130 ~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dp~~Rps---~~~v~~  176 (224)
                      ... .....+..  ..+    ..+.+|+.+|+ .||.+|++   ++++++
T Consensus       251 ~~~-~~~~p~~~--~~s----~~~~~li~~l~-~~p~~R~~~~~~~ei~~  292 (360)
T cd05627         251 WKE-TLVFPPEV--PIS----EKAKDLILRFC-TDSENRIGSNGVEEIKS  292 (360)
T ss_pred             CCC-ceecCCCC--CCC----HHHHHHHHHhc-cChhhcCCCCCHHHHhc
Confidence            100 00011110  111    23556777876 49999996   455544


No 267
>cd07838 STKc_CDK4_6_like Catalytic domain of Cyclin-Dependent protein Kinase 4 and 6-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 4 (CDK4) and CDK6-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK4/6-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK4 and CDK6 partner with D-type cyclins to regulate the early G1 phase of the cell cycle. They are the first kinase activated by mitogenic signals to release cells from the G0 arrested state. CDK4 and CDK6 are both
Probab=99.93  E-value=5e-26  Score=181.67  Aligned_cols=166  Identities=25%  Similarity=0.311  Sum_probs=120.3

Q ss_pred             CCCChHHHHHHHHHHHHHHhhhhcCCCCceEecCCCCCceEECCCCCceEeeecceeecCCCCCCCcccccccccccCCc
Q 041793            5 KILDWPKRFHIICGTARGVMYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDEIEGNTNRVIGTYGYMAP   84 (224)
Q Consensus         5 ~~l~~~~~~~i~~qi~~~l~~Lh~~~~~~i~H~dl~~~nil~~~~~~~kl~df~~~~~~~~~~~~~~~~~~~~~~~y~aP   84 (224)
                      ..+++.+++.++.||+.||.|||+.+   ++|+||+|+||+++.++.++++|||++........   .....++..|++|
T Consensus       102 ~~l~~~~~~~~~~~i~~al~~LH~~~---i~h~~l~~~nili~~~~~~~l~dfg~~~~~~~~~~---~~~~~~~~~~~~P  175 (287)
T cd07838         102 PGLPPETIKDLMRQLLRGVDFLHSHR---IVHRDLKPQNILVTSDGQVKIADFGLARIYSFEMA---LTSVVVTLWYRAP  175 (287)
T ss_pred             CCCCHHHHHHHHHHHHHHHHHHHHCC---eeeccCChhhEEEccCCCEEEeccCcceeccCCcc---cccccccccccCh
Confidence            35899999999999999999999999   99999999999999999999999999877643221   1223457789999


Q ss_pred             ccccCCCcccccceEehhHHHHHHHhcccCCCCcCCCcccccc-cccCCC------------ccccCccccCCc---CHH
Q 041793           85 EYASDGKFSVKSDVFSFGILLLEIISGKKNRGFYHSDNKLNLI-GHVSMP------------SQLIDPCIQGSF---NLV  148 (224)
Q Consensus        85 E~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~-~~~~~~------------~~~~~~~~~~~~---~~~  148 (224)
                      |.+.+..++.++|+||||+++++|++|..||......+....+ ......            ............   ...
T Consensus       176 E~~~~~~~~~~~Di~s~G~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  255 (287)
T cd07838         176 EVLLQSSYATPVDMWSVGCIFAELFRRRPLFRGTSEADQLDKIFDVIGLPSEEEWPRNVSLPRSSFPSYTPRSFKSFVPE  255 (287)
T ss_pred             HHhccCCCCCcchhhhHHHHHHHHHhCCCcccCCChHHHHHHHHHHcCCCChHhcCCCcccchhhcccccccchhhhhhh
Confidence            9998888999999999999999999999887643322111100 000000            000000000000   001


Q ss_pred             HHHHHHHHHHHhccCCCCCCCChHHHHH
Q 041793          149 EVIRCIHIGLLCVQQHPKDRPSMPSVIL  176 (224)
Q Consensus       149 ~~~~~~~li~~cl~~dp~~Rps~~~v~~  176 (224)
                      ....+.+++.+||+.||++||++++++.
T Consensus       256 ~~~~~~~li~~~l~~dp~~Rp~~~~il~  283 (287)
T cd07838         256 ICEEGLDLLKKMLTFNPHKRISAFEALQ  283 (287)
T ss_pred             hhHHHHHHHHHHhccCCccCCCHHHHhc
Confidence            1245678999999999999999999974


No 268
>cd05118 STKc_CMGC Catalytic domain of CMGC family Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), CMGC family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CMGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The CMGC family consists of Cyclin-Dependent protein Kinases (CDKs), Mitogen-activated protein kinases (MAPKs) such as Extracellular signal-regulated kinase (ERKs), c-Jun N-terminal kinases (JNKs), and p38, and similar proteins. CDKs belong to a large subfamily of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. MAPKs serve as important mediators of cellular responses to extracellular signals. They
Probab=99.93  E-value=2.4e-26  Score=183.12  Aligned_cols=168  Identities=21%  Similarity=0.271  Sum_probs=120.5

Q ss_pred             CCCCChHHHHHHHHHHHHHHhhhhcCCCCceEecCCCCCceEECCCCCceEeeecceeecCCCCCCCcccccccccccCC
Q 041793            4 CKILDWPKRFHIICGTARGVMYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDEIEGNTNRVIGTYGYMA   83 (224)
Q Consensus         4 ~~~l~~~~~~~i~~qi~~~l~~Lh~~~~~~i~H~dl~~~nil~~~~~~~kl~df~~~~~~~~~~~~~~~~~~~~~~~y~a   83 (224)
                      ...+++.+++.++.||+.||.|||+.+   ++|+||+|+||+++.++.++++|||.+.......  .......++..|++
T Consensus        92 ~~~~~~~~~~~~~~~i~~~l~~LH~~~---i~H~dl~p~nili~~~~~~~l~df~~~~~~~~~~--~~~~~~~~~~~~~~  166 (283)
T cd05118          92 QRGLPESLIKSYLYQLLQGLAFCHSHG---ILHRDLKPENLLINTEGVLKLADFGLARSFGSPV--RPYTHYVVTRWYRA  166 (283)
T ss_pred             cccCCHHHHHHHHHHHHHHHHHHHHCC---eeecCcCHHHEEECCCCcEEEeeeeeeEecCCCc--ccccCccCcccccC
Confidence            357899999999999999999999999   9999999999999999999999999998765432  11122346678999


Q ss_pred             cccccCC-CcccccceEehhHHHHHHHhcccCCCCcCCCcccccc-cccCCCcc----------------ccCcccc--C
Q 041793           84 PEYASDG-KFSVKSDVFSFGILLLEIISGKKNRGFYHSDNKLNLI-GHVSMPSQ----------------LIDPCIQ--G  143 (224)
Q Consensus        84 PE~~~~~-~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~-~~~~~~~~----------------~~~~~~~--~  143 (224)
                      ||.+.+. .++.++|+||||++++++++|+.||......+..... .....+..                .......  .
T Consensus       167 PE~~~~~~~~~~~~Di~slG~~l~~l~tg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  246 (283)
T cd05118         167 PELLLGDKGYSTPVDIWSVGCIFAELLSRRPLFPGKSEIDQLFKIFRTLGTPDPEVWPKFTSLARNYKFSFPKKAGMPLP  246 (283)
T ss_pred             cHHHhcCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHcCCCchHhcccchhhhhhhhhhhccccccCHH
Confidence            9998766 6789999999999999999999987543321110000 00000000                0000000  0


Q ss_pred             CcCHHHHHHHHHHHHHhccCCCCCCCChHHHHH
Q 041793          144 SFNLVEVIRCIHIGLLCVQQHPKDRPSMPSVIL  176 (224)
Q Consensus       144 ~~~~~~~~~~~~li~~cl~~dp~~Rps~~~v~~  176 (224)
                      .........+.++|.+||+.||.+||++.+++.
T Consensus       247 ~~~~~~~~~~~~~i~~~l~~~P~~Rp~~~~ll~  279 (283)
T cd05118         247 KLFPNASPQALDLLSQMLHYDPHKRITAEQALA  279 (283)
T ss_pred             HhhhhhCHHHHHHHHHHhccCcccCcCHHHHhh
Confidence            000111346789999999999999999999975


No 269
>cd06605 PKc_MAPKK Catalytic domain of the dual-specificity Protein Kinase, Mitogen-Activated Protein Kinase Kinase. Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK or MAP2K), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK or MAP3K). MAPKKs are dual-specificity
Probab=99.93  E-value=2e-26  Score=182.01  Aligned_cols=159  Identities=27%  Similarity=0.434  Sum_probs=119.7

Q ss_pred             CCCChHHHHHHHHHHHHHHhhhhc-CCCCceEecCCCCCceEECCCCCceEeeecceeecCCCCCCCcccccccccccCC
Q 041793            5 KILDWPKRFHIICGTARGVMYLHQ-DSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDEIEGNTNRVIGTYGYMA   83 (224)
Q Consensus         5 ~~l~~~~~~~i~~qi~~~l~~Lh~-~~~~~i~H~dl~~~nil~~~~~~~kl~df~~~~~~~~~~~~~~~~~~~~~~~y~a   83 (224)
                      +.+++..++.++.|++.||.|||+ .+   ++|+||+|+||+++.++.++|+|||.+........    ....++..|++
T Consensus        95 ~~~~~~~~~~~~~~l~~~l~~lH~~~~---i~H~dl~~~ni~~~~~~~~~l~d~g~~~~~~~~~~----~~~~~~~~y~~  167 (265)
T cd06605          95 GRIPERILGKIAVAVLKGLTYLHEKHK---IIHRDVKPSNILVNSRGQIKLCDFGVSGQLVNSLA----KTFVGTSSYMA  167 (265)
T ss_pred             CCCCHHHHHHHHHHHHHHHHHHcCCCC---eecCCCCHHHEEECCCCCEEEeecccchhhHHHHh----hcccCChhccC
Confidence            678999999999999999999999 88   99999999999999999999999998865432211    11456778999


Q ss_pred             cccccCCCcccccceEehhHHHHHHHhcccCCCCcCCC--cccccccccCCCccccCccccCCcCHHHHHHHHHHHHHhc
Q 041793           84 PEYASDGKFSVKSDVFSFGILLLEIISGKKNRGFYHSD--NKLNLIGHVSMPSQLIDPCIQGSFNLVEVIRCIHIGLLCV  161 (224)
Q Consensus        84 PE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl  161 (224)
                      ||.+.+..++.++|+||||++++++++|+.||......  .............   .+.....   .....+.++|.+||
T Consensus       168 PE~~~~~~~~~~~Dv~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~---~~~~~~~~li~~~l  241 (265)
T cd06605         168 PERIQGNDYSVKSDIWSLGLSLIELATGRFPYPPENDPPDGIFELLQYIVNEP---PPRLPSG---KFSPDFQDFVNLCL  241 (265)
T ss_pred             HHHHcCCCCCchhhHHHHHHHHHHHHhCCCCCCccccccccHHHHHHHHhcCC---CCCCChh---hcCHHHHHHHHHHc
Confidence            99998888999999999999999999999998643211  1111111111000   0001111   01234678999999


Q ss_pred             cCCCCCCCChHHHHH
Q 041793          162 QQHPKDRPSMPSVIL  176 (224)
Q Consensus       162 ~~dp~~Rps~~~v~~  176 (224)
                      ..||++||++.+++.
T Consensus       242 ~~~p~~Rpt~~~ll~  256 (265)
T cd06605         242 IKDPRERPSYKELLE  256 (265)
T ss_pred             CCCchhCcCHHHHhh
Confidence            999999999999975


No 270
>cd06611 STKc_SLK_like Catalytic domain of Ste20-like kinase-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), Ste20-like kinase (SLK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SLK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of the subfamily include SLK, STK10 (also called LOK for lymphocyte-oriented kinase), SmSLK (Schistosoma mansoni SLK), and related proteins. SLK promotes apoptosis through apoptosis signal-regulating kinase 1 (ASK1) and the mitogen-activated protein kinase (MAPK) p38. It also plays a role in mediating actin reorganization. STK10 is responsible in regulating the CD28 responsive element in T cells, as well as leukocyte function associated anti
Probab=99.93  E-value=2.8e-26  Score=182.80  Aligned_cols=161  Identities=27%  Similarity=0.389  Sum_probs=118.3

Q ss_pred             CCCCChHHHHHHHHHHHHHHhhhhcCCCCceEecCCCCCceEECCCCCceEeeecceeecCCCCCCCcccccccccccCC
Q 041793            4 CKILDWPKRFHIICGTARGVMYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDEIEGNTNRVIGTYGYMA   83 (224)
Q Consensus         4 ~~~l~~~~~~~i~~qi~~~l~~Lh~~~~~~i~H~dl~~~nil~~~~~~~kl~df~~~~~~~~~~~~~~~~~~~~~~~y~a   83 (224)
                      .+.+++.+++.++.|++.||.|||+.+   |+|+||+|+||+++.++.++++|||++........  ......++..|++
T Consensus        97 ~~~l~~~~~~~~~~ql~~~l~~lh~~~---i~h~dl~p~nili~~~~~~~l~d~g~~~~~~~~~~--~~~~~~~~~~y~~  171 (280)
T cd06611          97 ERGLTEPQIRYVCRQMLEALNFLHSHK---VIHRDLKAGNILLTLDGDVKLADFGVSAKNKSTLQ--KRDTFIGTPYWMA  171 (280)
T ss_pred             cCCCCHHHHHHHHHHHHHHHHHHHHCC---cccCCCChhhEEECCCCCEEEccCccchhhccccc--ccceeecchhhcC
Confidence            457899999999999999999999999   99999999999999999999999998765432211  1222456778999


Q ss_pred             ccccc-----CCCcccccceEehhHHHHHHHhcccCCCCcCCCcccccccccCCCccccCccccCCcCHHHHHHHHHHHH
Q 041793           84 PEYAS-----DGKFSVKSDVFSFGILLLEIISGKKNRGFYHSDNKLNLIGHVSMPSQLIDPCIQGSFNLVEVIRCIHIGL  158 (224)
Q Consensus        84 PE~~~-----~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~  158 (224)
                      ||.+.     +..++.++|+||||+++|++++|+.||...........+.....+  ...  .....+    ..+.+++.
T Consensus       172 PE~~~~~~~~~~~~~~~sDi~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~--~~~--~~~~~~----~~~~~li~  243 (280)
T cd06611         172 PEVVACETFKDNPYDYKADIWSLGITLIELAQMEPPHHELNPMRVLLKILKSEPP--TLD--QPSKWS----SSFNDFLK  243 (280)
T ss_pred             HHHHhhcccCCCCCCccccHHHHHHHHHHHHhCCCCcccCCHHHHHHHHhcCCCC--CcC--CcccCC----HHHHHHHH
Confidence            99874     344678999999999999999999998654322111111100000  000  011111    24667889


Q ss_pred             HhccCCCCCCCChHHHHHH
Q 041793          159 LCVQQHPKDRPSMPSVILM  177 (224)
Q Consensus       159 ~cl~~dp~~Rps~~~v~~~  177 (224)
                      +||+.+|++||+++++++.
T Consensus       244 ~~l~~~p~~Rps~~~il~~  262 (280)
T cd06611         244 SCLVKDPDDRPTAAELLKH  262 (280)
T ss_pred             HHhccChhhCcCHHHHhcC
Confidence            9999999999999999764


No 271
>cd05622 STKc_ROCK1 Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase 1. Serine/Threonine Kinases (STKs), ROCK subfamily, ROCK1 (or ROK-beta) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK contains an N-terminal extension, a catalytic kinase domain, and a C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain, and is activated via interaction with Rho GTPases. ROCK1 is preferentially expressed in the liver, lung, spleen, testes, an
Probab=99.93  E-value=7.5e-26  Score=187.57  Aligned_cols=163  Identities=17%  Similarity=0.210  Sum_probs=116.0

Q ss_pred             CCCChHHHHHHHHHHHHHHhhhhcCCCCceEecCCCCCceEECCCCCceEeeecceeecCCCCCCCcccccccccccCCc
Q 041793            5 KILDWPKRFHIICGTARGVMYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDEIEGNTNRVIGTYGYMAP   84 (224)
Q Consensus         5 ~~l~~~~~~~i~~qi~~~l~~Lh~~~~~~i~H~dl~~~nil~~~~~~~kl~df~~~~~~~~~~~~~~~~~~~~~~~y~aP   84 (224)
                      ..+++..+..++.||+.||.|||+.|   |+||||||+||+++.++.++|+|||++........ .......|++.|+||
T Consensus       137 ~~~~~~~~~~~~~qi~~aL~~LH~~~---ivHrDLkp~NIll~~~~~ikL~DfG~a~~~~~~~~-~~~~~~~gt~~y~aP  212 (371)
T cd05622         137 YDVPEKWARFYTAEVVLALDAIHSMG---FIHRDVKPDNMLLDKSGHLKLADFGTCMKMNKEGM-VRCDTAVGTPDYISP  212 (371)
T ss_pred             cCCCHHHHHHHHHHHHHHHHHHHHCC---EEeCCCCHHHEEECCCCCEEEEeCCceeEcCcCCc-ccccCcccCccccCH
Confidence            45788899999999999999999999   99999999999999999999999999987643221 112335688999999


Q ss_pred             ccccCCC----cccccceEehhHHHHHHHhcccCCCCcCCCcccccccccCCCccccCccccCCcCHHHHHHHHHHHHHh
Q 041793           85 EYASDGK----FSVKSDVFSFGILLLEIISGKKNRGFYHSDNKLNLIGHVSMPSQLIDPCIQGSFNLVEVIRCIHIGLLC  160 (224)
Q Consensus        85 E~~~~~~----~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~c  160 (224)
                      |.+.+..    ++.++|+|||||++|+|++|..||........   ...+........  ......  ....+.+++.+|
T Consensus       213 E~l~~~~~~~~~~~~~DiwSlGvilyell~G~~Pf~~~~~~~~---~~~i~~~~~~~~--~~~~~~--~s~~~~~li~~~  285 (371)
T cd05622         213 EVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTPFYADSLVGT---YSKIMNHKNSLT--FPDDND--ISKEAKNLICAF  285 (371)
T ss_pred             HHHhccCCCccCCCccceeehhHHHHHHHhCCCCCCCCCHHHH---HHHHHcCCCccc--CCCcCC--CCHHHHHHHHHH
Confidence            9986533    67899999999999999999999864332111   111111000000  001111  112356788899


Q ss_pred             ccCCCCC--CCChHHHHHHh
Q 041793          161 VQQHPKD--RPSMPSVILML  178 (224)
Q Consensus       161 l~~dp~~--Rps~~~v~~~L  178 (224)
                      |..++.+  |++++++++..
T Consensus       286 L~~~~~r~~r~~~~ei~~h~  305 (371)
T cd05622         286 LTDREVRLGRNGVEEIKRHL  305 (371)
T ss_pred             cCChhhhcCCCCHHHHhcCc
Confidence            9844433  67898888753


No 272
>cd07846 STKc_CDKL2_3 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase Like 2 and 3. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 2 (CDKL2) and CDKL3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL2 and CDKL3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKL2, also called p56 KKIAMRE, is expressed in testis, kidney, lung, and brain. It functions mainly in mature neurons and plays an important role in learning and memory. Inactivation of CDKL3, also called NKI
Probab=99.93  E-value=5.4e-26  Score=181.56  Aligned_cols=168  Identities=25%  Similarity=0.360  Sum_probs=118.2

Q ss_pred             CCCCChHHHHHHHHHHHHHHhhhhcCCCCceEecCCCCCceEECCCCCceEeeecceeecCCCCCCCcccccccccccCC
Q 041793            4 CKILDWPKRFHIICGTARGVMYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDEIEGNTNRVIGTYGYMA   83 (224)
Q Consensus         4 ~~~l~~~~~~~i~~qi~~~l~~Lh~~~~~~i~H~dl~~~nil~~~~~~~kl~df~~~~~~~~~~~~~~~~~~~~~~~y~a   83 (224)
                      ...+++.+++.++.||+.||.|||+.+   ++|+||+|+||+++.++.++++|||++.......  .......++..|+|
T Consensus        94 ~~~~~~~~~~~~~~~i~~~l~~LH~~~---i~h~~l~p~ni~~~~~~~~~l~dfg~~~~~~~~~--~~~~~~~~~~~y~a  168 (286)
T cd07846          94 PNGLDESRVRKYLFQILRGIEFCHSHN---IIHRDIKPENILVSQSGVVKLCDFGFARTLAAPG--EVYTDYVATRWYRA  168 (286)
T ss_pred             cCCCCHHHHHHHHHHHHHHHHHHHHCC---ccccCCCHHHEEECCCCcEEEEeeeeeeeccCCc--cccCcccceeeccC
Confidence            345899999999999999999999999   9999999999999999999999999988654332  11222456788999


Q ss_pred             cccccCC-CcccccceEehhHHHHHHHhcccCCCCcCCCccccc-c---cccC-------CC----ccccCccccCCcCH
Q 041793           84 PEYASDG-KFSVKSDVFSFGILLLEIISGKKNRGFYHSDNKLNL-I---GHVS-------MP----SQLIDPCIQGSFNL  147 (224)
Q Consensus        84 PE~~~~~-~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~-~---~~~~-------~~----~~~~~~~~~~~~~~  147 (224)
                      ||.+.+. .++.++|+||||++++++++|+.||......+.... .   ....       ..    .....+........
T Consensus       169 PE~~~~~~~~~~~~Dv~slG~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  248 (286)
T cd07846         169 PELLVGDTKYGRAVDIWAVGCLVTEMLTGEPLFPGDSDIDQLYHIIKCLGNLIPRHQEIFQKNPLFAGMRLPEVKEIEPL  248 (286)
T ss_pred             cHHhccccccCchHhHHHHHHHHHHHHcCCCCCCCCchHHHHHHHHHHhCCCchhhHHHhccchHhhccccccccCcchH
Confidence            9988653 467899999999999999999988753321110000 0   0000       00    00000000000000


Q ss_pred             -----HHHHHHHHHHHHhccCCCCCCCChHHHHH
Q 041793          148 -----VEVIRCIHIGLLCVQQHPKDRPSMPSVIL  176 (224)
Q Consensus       148 -----~~~~~~~~li~~cl~~dp~~Rps~~~v~~  176 (224)
                           .....+.+++.+||+.+|++||++.++++
T Consensus       249 ~~~~~~~~~~~~~li~~~l~~~P~~Rp~~~~il~  282 (286)
T cd07846         249 EKRFPKLSGLVLDLAKQCLRIDPDDRPSSSQLLH  282 (286)
T ss_pred             HHhCCCcCHHHHHHHHHHhcCCcccchhHHHHhc
Confidence                 01235778999999999999999999875


No 273
>cd08217 STKc_Nek2 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 2. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 2 (Nek2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek2 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek2 subfamily includes Aspergillus nidulans NIMA kinase, the founding member of the Nek family, which was identified in a screen for cell cycle mutants prevented from entering mitosis. NIMA is essential for mitotic entry and progression through mitosis, and its degradation is essential for mitotic exi
Probab=99.93  E-value=3.8e-26  Score=180.00  Aligned_cols=159  Identities=25%  Similarity=0.341  Sum_probs=122.3

Q ss_pred             CCCCChHHHHHHHHHHHHHHhhhh-----cCCCCceEecCCCCCceEECCCCCceEeeecceeecCCCCCCCcccccccc
Q 041793            4 CKILDWPKRFHIICGTARGVMYLH-----QDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDEIEGNTNRVIGT   78 (224)
Q Consensus         4 ~~~l~~~~~~~i~~qi~~~l~~Lh-----~~~~~~i~H~dl~~~nil~~~~~~~kl~df~~~~~~~~~~~~~~~~~~~~~   78 (224)
                      ...+++.+++.++.||+.||.|||     +.+   ++|+||+|+||+++.++.++++|||++.........  .....++
T Consensus        99 ~~~l~~~~~~~~~~~i~~~l~~lH~~~~~~~~---i~h~dl~p~nili~~~~~~kl~d~g~~~~~~~~~~~--~~~~~~~  173 (265)
T cd08217          99 RKYIEEEFIWRILTQLLLALYECHNRSDPGNT---VLHRDLKPANIFLDANNNVKLGDFGLAKILGHDSSF--AKTYVGT  173 (265)
T ss_pred             ccCCCHHHHHHHHHHHHHHHHHHhcCccccCc---ceecCCCHHHEEEecCCCEEEecccccccccCCccc--ccccccC
Confidence            567899999999999999999999     777   999999999999999999999999998876433211  1224567


Q ss_pred             cccCCcccccCCCcccccceEehhHHHHHHHhcccCCCCcCCCcccccccccCCCccccCccccCCcCHHHHHHHHHHHH
Q 041793           79 YGYMAPEYASDGKFSVKSDVFSFGILLLEIISGKKNRGFYHSDNKLNLIGHVSMPSQLIDPCIQGSFNLVEVIRCIHIGL  158 (224)
Q Consensus        79 ~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~  158 (224)
                      ..|++||.+.+..++.++|+||||++++++++|..||.......   ....+.... .  +....    .....+.+++.
T Consensus       174 ~~~~~pE~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~---~~~~~~~~~-~--~~~~~----~~~~~~~~l~~  243 (265)
T cd08217         174 PYYMSPEQLNHMSYDEKSDIWSLGCLIYELCALSPPFTARNQLQ---LASKIKEGK-F--RRIPY----RYSSELNEVIK  243 (265)
T ss_pred             CCccChhhhcCCCCCchhHHHHHHHHHHHHHHCCCcccCcCHHH---HHHHHhcCC-C--CCCcc----ccCHHHHHHHH
Confidence            88999999988888999999999999999999999986543221   111111100 0  01111    11245678999


Q ss_pred             HhccCCCCCCCChHHHHHH
Q 041793          159 LCVQQHPKDRPSMPSVILM  177 (224)
Q Consensus       159 ~cl~~dp~~Rps~~~v~~~  177 (224)
                      +||+.+|++||++++|++.
T Consensus       244 ~~l~~~p~~Rp~~~~il~~  262 (265)
T cd08217         244 SMLNVDPDKRPSTEELLQL  262 (265)
T ss_pred             HHccCCcccCCCHHHHhhC
Confidence            9999999999999999763


No 274
>cd07842 STKc_CDK8_like Catalytic domain of Cyclin-Dependent protein Kinase 8-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 8 (CDK8)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK8-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK8, CDC2L6, and similar proteins. CDK8 functions as a negative or positive regulator of transcription, depending on the scenario. Together with its regulator, cyclin C, it reversibly associates with the 
Probab=99.93  E-value=2e-26  Score=186.56  Aligned_cols=113  Identities=26%  Similarity=0.353  Sum_probs=93.5

Q ss_pred             CCCChHHHHHHHHHHHHHHhhhhcCCCCceEecCCCCCceEECC----CCCceEeeecceeecCCCCCC-Cccccccccc
Q 041793            5 KILDWPKRFHIICGTARGVMYLHQDSRLRIIHRDLKASNVLLDQ----DMNPKISDFGLARAFGGDEIE-GNTNRVIGTY   79 (224)
Q Consensus         5 ~~l~~~~~~~i~~qi~~~l~~Lh~~~~~~i~H~dl~~~nil~~~----~~~~kl~df~~~~~~~~~~~~-~~~~~~~~~~   79 (224)
                      ..+++..++.++.||+.||.|||+.+   ++|+||+|+||+++.    ++.++++|||++......... .......++.
T Consensus       103 ~~~~~~~~~~i~~qi~~~l~~lH~~~---i~h~dlkp~Nil~~~~~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~  179 (316)
T cd07842         103 VSIPPSMVKSLLWQILNGVHYLHSNW---VLHRDLKPANILVMGEGPERGVVKIGDLGLARLFNAPLKPLADLDPVVVTI  179 (316)
T ss_pred             cCcCHHHHHHHHHHHHHHHHHHHhCC---EeeCCCCHHHEEEcCCCCccceEEECCCccccccCCCcccccccCCccccc
Confidence            37889999999999999999999999   999999999999999    899999999998865432211 1112234577


Q ss_pred             ccCCcccccCC-CcccccceEehhHHHHHHHhcccCCCCcCC
Q 041793           80 GYMAPEYASDG-KFSVKSDVFSFGILLLEIISGKKNRGFYHS  120 (224)
Q Consensus        80 ~y~aPE~~~~~-~~~~~~Di~slG~il~~l~~g~~p~~~~~~  120 (224)
                      .|+|||.+.+. .++.++|+||||+++++|++|..||.....
T Consensus       180 ~y~aPE~~~~~~~~~~~~Dv~slG~~l~~l~~~~~~~~~~~~  221 (316)
T cd07842         180 WYRAPELLLGARHYTKAIDIWAIGCIFAELLTLEPIFKGREA  221 (316)
T ss_pred             cccCHHHHhCCCCCCcHHHHHHHHHHHHHHHhcCCCCcCCcc
Confidence            89999987664 478999999999999999999999875443


No 275
>cd05606 STKc_beta_ARK Catalytic domain of the Protein Serine/Threonine Kinase, beta-adrenergic receptor kinase. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, beta-adrenergic receptor kinase (beta-ARK) group, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. The beta-ARK group is co
Probab=99.93  E-value=6.8e-26  Score=180.74  Aligned_cols=159  Identities=24%  Similarity=0.326  Sum_probs=120.7

Q ss_pred             CCCCChHHHHHHHHHHHHHHhhhhcCCCCceEecCCCCCceEECCCCCceEeeecceeecCCCCCCCcccccccccccCC
Q 041793            4 CKILDWPKRFHIICGTARGVMYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDEIEGNTNRVIGTYGYMA   83 (224)
Q Consensus         4 ~~~l~~~~~~~i~~qi~~~l~~Lh~~~~~~i~H~dl~~~nil~~~~~~~kl~df~~~~~~~~~~~~~~~~~~~~~~~y~a   83 (224)
                      .+.+++..+..++.|++.||.|||+.+   ++|+||+|.||+++.++.++++|||++......    ......++..|+|
T Consensus        91 ~~~l~~~~~~~~~~ql~~~l~~lH~~~---i~H~di~p~nili~~~~~~kl~dfg~~~~~~~~----~~~~~~~~~~y~a  163 (278)
T cd05606          91 HGVFSEAEMRFYAAEIILGLEHMHNRF---VVYRDLKPANILLDEHGHVRISDLGLACDFSKK----KPHASVGTHGYMA  163 (278)
T ss_pred             cCCCCHHHHHHHHHHHHHHHHHHHHCC---EEcCCCCHHHEEECCCCCEEEccCcCccccCcc----CCcCcCCCcCCcC
Confidence            457899999999999999999999999   999999999999999999999999998754321    1223467889999


Q ss_pred             cccccCC-CcccccceEehhHHHHHHHhcccCCCCcCCCcccccccccCCCccccCccccCCcCHHHHHHHHHHHHHhcc
Q 041793           84 PEYASDG-KFSVKSDVFSFGILLLEIISGKKNRGFYHSDNKLNLIGHVSMPSQLIDPCIQGSFNLVEVIRCIHIGLLCVQ  162 (224)
Q Consensus        84 PE~~~~~-~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~  162 (224)
                      ||.+.++ .++.++|+||+|+++++|++|..||.................    .....+...    ...+.+++.+||.
T Consensus       164 PE~~~~~~~~~~~~Di~s~G~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~----~~~~~~~~~----s~~~~~li~~~l~  235 (278)
T cd05606         164 PEVLQKGVAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDKHEIDRMTLT----MAVELPDSF----SPELRSLLEGLLQ  235 (278)
T ss_pred             cHHhcCCCCCCcccchHhHHHHHHHHHhCCCCCCCCCccchHHHHHHhhc----cCCCCCCcC----CHHHHHHHHHHhh
Confidence            9998754 578999999999999999999999865432222211111110    011111111    2356788889999


Q ss_pred             CCCCCCC-----ChHHHHHH
Q 041793          163 QHPKDRP-----SMPSVILM  177 (224)
Q Consensus       163 ~dp~~Rp-----s~~~v~~~  177 (224)
                      .+|.+||     ++.++++.
T Consensus       236 ~~p~~R~~~~~~~~~~ll~~  255 (278)
T cd05606         236 RDVNRRLGCLGRGAQEVKEH  255 (278)
T ss_pred             cCHHhccCCCCCCHHHHHhC
Confidence            9999999     99999753


No 276
>KOG0610 consensus Putative serine/threonine protein kinase [General function prediction only]
Probab=99.93  E-value=6.8e-26  Score=181.03  Aligned_cols=164  Identities=21%  Similarity=0.251  Sum_probs=125.7

Q ss_pred             CCCCCCCChHHHHHHHHHHHHHHhhhhcCCCCceEecCCCCCceEECCCCCceEeeecceeecCC---------------
Q 041793            1 QERCKILDWPKRFHIICGTARGVMYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGG---------------   65 (224)
Q Consensus         1 ~~~~~~l~~~~~~~i~~qi~~~l~~Lh~~~~~~i~H~dl~~~nil~~~~~~~kl~df~~~~~~~~---------------   65 (224)
                      ++.++.|+++.+..++.+|+.||+|||..|   |+.|||||+|||+..+|++.|.||+++.....               
T Consensus       170 kQp~~~fse~~aRFYaAEvl~ALEYLHmlG---ivYRDLKPENILvredGHIMLsDFDLS~~~~~~Pt~~~s~~~~~~~~  246 (459)
T KOG0610|consen  170 KQPGKRFSESAARFYAAEVLLALEYLHMLG---IVYRDLKPENILVREDGHIMLSDFDLSLRCPVSPTLVKSSSPRSSGS  246 (459)
T ss_pred             hCCCCccchhhHHHHHHHHHHHHHHHHhhc---eeeccCCcceeEEecCCcEEeeeccccccCCCCCeeeccCCCCCCCC
Confidence            367889999999999999999999999999   99999999999999999999999998754310               


Q ss_pred             --------------C-----CC--------------------CCcccccccccccCCcccccCCCcccccceEehhHHHH
Q 041793           66 --------------D-----EI--------------------EGNTNRVIGTYGYMAPEYASDGKFSVKSDVFSFGILLL  106 (224)
Q Consensus        66 --------------~-----~~--------------------~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~  106 (224)
                                    .     ..                    ......++||-.|+|||+++|.+.+.+.|.|+||+++|
T Consensus       247 ~~~~~~~~~s~f~~r~~~~~~~~~k~~~~~~~~~p~~~aep~~~RSnSFVGThEYlAPEvI~G~GHgsAVDWWtfGIflY  326 (459)
T KOG0610|consen  247 QPSCRSRQPSCFSPRCLSSSKKRKKKDESASRSLPELVAEPTGARSNSFVGTHEYLAPEVIRGEGHGSAVDWWTFGIFLY  326 (459)
T ss_pred             CcccccccccccccchhccccccccccccccccchhhhcCCCCccccccccccccccceeeecCCCCchhhHHHHHHHHH
Confidence                          0     00                    01112357788899999999999999999999999999


Q ss_pred             HHHhcccCCCCcCCCcccccccccCCCccccCccccCCcCHHHHHHHHHHHHHhccCCCCCCCC----hHHHHH
Q 041793          107 EIISGKKNRGFYHSDNKLNLIGHVSMPSQLIDPCIQGSFNLVEVIRCIHIGLLCVQQHPKDRPS----MPSVIL  176 (224)
Q Consensus       107 ~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dp~~Rps----~~~v~~  176 (224)
                      ||+.|..||.+.....-  +.+.+..+...++..       .....+.+||++.|..||.+|..    +.||.+
T Consensus       327 EmLyG~TPFKG~~~~~T--l~NIv~~~l~Fp~~~-------~vs~~akDLIr~LLvKdP~kRlg~~rGA~eIK~  391 (459)
T KOG0610|consen  327 EMLYGTTPFKGSNNKET--LRNIVGQPLKFPEEP-------EVSSAAKDLIRKLLVKDPSKRLGSKRGAAEIKR  391 (459)
T ss_pred             HHHhCCCCcCCCCchhh--HHHHhcCCCcCCCCC-------cchhHHHHHHHHHhccChhhhhccccchHHhhc
Confidence            99999999876543322  222222222222111       12345678999999999999987    777665


No 277
>cd06917 STKc_NAK1_like Catalytic domain of Fungal Nak1-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), Nak1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nak1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of Schizosaccharomyces pombe Nak1, Saccharomyces cerevisiae Kic1p (kinase that interacts with Cdc31p) and related proteins. Nak1 (also known as N-rich kinase 1), is required by fission yeast for polarizing the tips of actin cytoskeleton and is involved in cell growth, cell separation, cell morphology and cell-cycle progression. Kic1p is required by budding yeast for cell integrity and morphogenesis. Kic1p interacts with Cdc31p, the yeast homologue of cent
Probab=99.93  E-value=5.9e-26  Score=180.64  Aligned_cols=159  Identities=25%  Similarity=0.377  Sum_probs=120.4

Q ss_pred             CCCChHHHHHHHHHHHHHHhhhhcCCCCceEecCCCCCceEECCCCCceEeeecceeecCCCCCCCcccccccccccCCc
Q 041793            5 KILDWPKRFHIICGTARGVMYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDEIEGNTNRVIGTYGYMAP   84 (224)
Q Consensus         5 ~~l~~~~~~~i~~qi~~~l~~Lh~~~~~~i~H~dl~~~nil~~~~~~~kl~df~~~~~~~~~~~~~~~~~~~~~~~y~aP   84 (224)
                      +.+++..++.++.|++.||.|||+.|   ++|+||+|+||+++.++.++++|||++.........  .....++..|+||
T Consensus        96 ~~l~~~~~~~i~~~i~~~l~~lh~~~---i~H~dl~p~ni~i~~~~~~~l~dfg~~~~~~~~~~~--~~~~~~~~~y~aP  170 (277)
T cd06917          96 GPIAEKYISVIIREVLVALKYIHKVG---VIHRDIKAANILVTNTGNVKLCDFGVAALLNQNSSK--RSTFVGTPYWMAP  170 (277)
T ss_pred             cCCCHHHHHHHHHHHHHHHHHHHhCC---cccCCcCHHHEEEcCCCCEEEccCCceeecCCCccc--cccccCCcceeCH
Confidence            47899999999999999999999999   999999999999999999999999999876543311  2224577789999


Q ss_pred             ccccCC-CcccccceEehhHHHHHHHhcccCCCCcCCCcccccccccCCCccccCccccCCcCHHHHHHHHHHHHHhccC
Q 041793           85 EYASDG-KFSVKSDVFSFGILLLEIISGKKNRGFYHSDNKLNLIGHVSMPSQLIDPCIQGSFNLVEVIRCIHIGLLCVQQ  163 (224)
Q Consensus        85 E~~~~~-~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~  163 (224)
                      |.+.++ .++.++|+||||+++|+|++|..||...............      ..+......   ....+.+++.+||+.
T Consensus       171 E~~~~~~~~~~~~Dv~slG~~l~~ll~g~~p~~~~~~~~~~~~~~~~------~~~~~~~~~---~~~~~~~~i~~~l~~  241 (277)
T cd06917         171 EVITEGKYYDTKADIWSLGITIYEMATGNPPYSDVDAFRAMMLIPKS------KPPRLEDNG---YSKLLREFVAACLDE  241 (277)
T ss_pred             HHhccCCccccchhHHHHHHHHHHHHhCCCCCCCCChhhhhhccccC------CCCCCCccc---CCHHHHHHHHHHcCC
Confidence            988654 4688999999999999999999998643322211111111      011111110   123467888999999


Q ss_pred             CCCCCCChHHHHHH
Q 041793          164 HPKDRPSMPSVILM  177 (224)
Q Consensus       164 dp~~Rps~~~v~~~  177 (224)
                      ||++||++.++++.
T Consensus       242 ~p~~R~~~~~il~~  255 (277)
T cd06917         242 EPKERLSAEELLKS  255 (277)
T ss_pred             CcccCcCHHHHhhC
Confidence            99999999999763


No 278
>cd07841 STKc_CDK7 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 7. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 7 (CDK7) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK7 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK7 plays essential roles in the cell cycle and in transcription. It associates with cyclin H and MAT1 and acts as a CDK-Activating Kinase (CAK) by phosphorylating and activating cell cycle CDKs (CDK1/2/4/6). In the brain, it activates CDK5. CDK7 is 
Probab=99.93  E-value=5.8e-26  Score=182.56  Aligned_cols=168  Identities=24%  Similarity=0.288  Sum_probs=118.2

Q ss_pred             CCCChHHHHHHHHHHHHHHhhhhcCCCCceEecCCCCCceEECCCCCceEeeecceeecCCCCCCCcccccccccccCCc
Q 041793            5 KILDWPKRFHIICGTARGVMYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDEIEGNTNRVIGTYGYMAP   84 (224)
Q Consensus         5 ~~l~~~~~~~i~~qi~~~l~~Lh~~~~~~i~H~dl~~~nil~~~~~~~kl~df~~~~~~~~~~~~~~~~~~~~~~~y~aP   84 (224)
                      ..+++..++.++.||+.||.|||+.|   ++|+||+|+||+++.++.++|+|||++........  ......++..|+||
T Consensus        97 ~~~~~~~~~~~~~qi~~al~~lH~~~---i~H~dl~p~nill~~~~~~~l~dfg~~~~~~~~~~--~~~~~~~~~~y~aP  171 (298)
T cd07841          97 IVLTPADIKSYMLMTLRGLEYLHSNW---ILHRDLKPNNLLIASDGVLKLADFGLARSFGSPNR--KMTHQVVTRWYRAP  171 (298)
T ss_pred             CCCCHHHHHHHHHHHHHHHHHHHhCC---eeecCCChhhEEEcCCCCEEEccceeeeeccCCCc--cccccccceeeeCH
Confidence            36899999999999999999999999   99999999999999999999999999987643221  11223446789999


Q ss_pred             ccccC-CCcccccceEehhHHHHHHHhcccCCCCcCCCcccccc-cccCCC-----------ccccCccccCCcC-----
Q 041793           85 EYASD-GKFSVKSDVFSFGILLLEIISGKKNRGFYHSDNKLNLI-GHVSMP-----------SQLIDPCIQGSFN-----  146 (224)
Q Consensus        85 E~~~~-~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~-~~~~~~-----------~~~~~~~~~~~~~-----  146 (224)
                      |.+.+ ..++.++|+||||++++++++|.++|............ .....+           .............     
T Consensus       172 E~~~~~~~~~~~~Dv~slG~il~e~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  251 (298)
T cd07841         172 ELLFGARHYGVGVDMWSVGCIFAELLLRVPFLPGDSDIDQLGKIFEALGTPTEENWPGVTSLPDYVEFKPFPPTPLKQIF  251 (298)
T ss_pred             HHHhCCCCCCcHHHHHHHHHHHHHHHcCCccccCCccHHHHHHHHHHcCCCchhhhhhcccccccccccccCCcchhhhc
Confidence            98854 45688999999999999999997776543221110000 000000           0000000000000     


Q ss_pred             HHHHHHHHHHHHHhccCCCCCCCChHHHHHH
Q 041793          147 LVEVIRCIHIGLLCVQQHPKDRPSMPSVILM  177 (224)
Q Consensus       147 ~~~~~~~~~li~~cl~~dp~~Rps~~~v~~~  177 (224)
                      ......+.+++.+||+.||++|||+.+|++.
T Consensus       252 ~~~~~~~~~li~~~l~~~P~~R~s~~e~l~~  282 (298)
T cd07841         252 PAASDDALDLLQRLLTLNPNKRITARQALEH  282 (298)
T ss_pred             ccccHHHHHHHHHHhcCCcccCcCHHHHhhC
Confidence            0112457789999999999999999999874


No 279
>cd06607 STKc_TAO Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids proteins. Serine/threonine kinases (STKs), thousand-and-one amino acids (TAO) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. They activate the MAPKs, p38 and c-Jun N-terminal kinase (JNK), by phosphorylating and activating the respective MAP/ERK kinases (MEKs, also known as MKKs or MAPKKs), MEK3/MEK6 and MKK4/MKK7. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Vertebrates contain three TAO subfamily
Probab=99.93  E-value=7.8e-26  Score=182.78  Aligned_cols=156  Identities=30%  Similarity=0.379  Sum_probs=117.4

Q ss_pred             CCCCChHHHHHHHHHHHHHHhhhhcCCCCceEecCCCCCceEECCCCCceEeeecceeecCCCCCCCcccccccccccCC
Q 041793            4 CKILDWPKRFHIICGTARGVMYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDEIEGNTNRVIGTYGYMA   83 (224)
Q Consensus         4 ~~~l~~~~~~~i~~qi~~~l~~Lh~~~~~~i~H~dl~~~nil~~~~~~~kl~df~~~~~~~~~~~~~~~~~~~~~~~y~a   83 (224)
                      .+.+++.++..++.||+.||.|||+.+   ++|+||+|.||+++.++.++++|||++......      ....++..|+|
T Consensus       109 ~~~l~~~~~~~~~~ql~~~L~~LH~~~---i~H~dl~p~nIl~~~~~~~kL~dfg~~~~~~~~------~~~~~~~~y~a  179 (307)
T cd06607         109 KKPLQEVEIAAICHGALQGLAYLHSHE---RIHRDIKAGNILLTEPGTVKLADFGSASLVSPA------NSFVGTPYWMA  179 (307)
T ss_pred             ccCCCHHHHHHHHHHHHHHHHHHHHCC---ceecCCCcccEEECCCCCEEEeecCcceecCCC------CCccCCccccC
Confidence            457899999999999999999999999   999999999999999999999999988754321      22356778999


Q ss_pred             ccccc---CCCcccccceEehhHHHHHHHhcccCCCCcCCCcccccccccCCCccccCccccCCcCHHHHHHHHHHHHHh
Q 041793           84 PEYAS---DGKFSVKSDVFSFGILLLEIISGKKNRGFYHSDNKLNLIGHVSMPSQLIDPCIQGSFNLVEVIRCIHIGLLC  160 (224)
Q Consensus        84 PE~~~---~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~c  160 (224)
                      ||.+.   ...++.++|+||||+++|++++|+.||................ ...     ..   .......+.+++.+|
T Consensus       180 PE~~~~~~~~~~~~~sDv~s~G~il~el~tg~~p~~~~~~~~~~~~~~~~~-~~~-----~~---~~~~~~~~~~li~~~  250 (307)
T cd06607         180 PEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMSALYHIAQND-SPT-----LS---SNDWSDYFRNFVDSC  250 (307)
T ss_pred             ceeeeccCCCCCCcccchHHHHHHHHHHHcCCCCCCCccHHHHHHHHhcCC-CCC-----CC---chhhCHHHHHHHHHH
Confidence            99874   3457889999999999999999999975432111110000000 000     00   011123477889999


Q ss_pred             ccCCCCCCCChHHHHHH
Q 041793          161 VQQHPKDRPSMPSVILM  177 (224)
Q Consensus       161 l~~dp~~Rps~~~v~~~  177 (224)
                      |+.+|++||++.+|+..
T Consensus       251 l~~~p~~Rp~~~~il~~  267 (307)
T cd06607         251 LQKIPQDRPSSEELLKH  267 (307)
T ss_pred             hcCChhhCcCHHHHhcC
Confidence            99999999999999764


No 280
>cd07831 STKc_MOK Catalytic domain of the Serine/Threonine Kinase, MAPK/MAK/MRK Overlapping Kinase. Serine/Threonine Kinases (STKs), MAPK/MAK/MRK Overlapping Kinase (MOK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MOK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MOK, also called Renal tumor antigen 1 (RAGE-1), is widely expressed and is enriched in testis, kidney, lung, and brain. It is expressed in approximately 50% of renal cell carcinomas (RCC) and is a potential target for immunotherapy. MOK is stabilized by its association with the HSP90 molecular chaperone. It is induced by the transcription factor Cdx2 and may be involved in regulating intestinal epithelial development and differentiation.
Probab=99.93  E-value=4e-26  Score=181.88  Aligned_cols=166  Identities=19%  Similarity=0.217  Sum_probs=117.9

Q ss_pred             CCCCChHHHHHHHHHHHHHHhhhhcCCCCceEecCCCCCceEECCCCCceEeeecceeecCCCCCCCcccccccccccCC
Q 041793            4 CKILDWPKRFHIICGTARGVMYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDEIEGNTNRVIGTYGYMA   83 (224)
Q Consensus         4 ~~~l~~~~~~~i~~qi~~~l~~Lh~~~~~~i~H~dl~~~nil~~~~~~~kl~df~~~~~~~~~~~~~~~~~~~~~~~y~a   83 (224)
                      .+.+++.+++.++.||+.||+|||+.|   ++|+||+|+||+++. +.++++|||++........   .....++..|+|
T Consensus        94 ~~~~~~~~~~~~~~qi~~~L~~LH~~~---i~H~dl~p~ni~l~~-~~~kl~dfg~~~~~~~~~~---~~~~~~~~~y~a  166 (282)
T cd07831          94 KRPLPEKRVKSYMYQLLKSLDHMHRNG---IFHRDIKPENILIKD-DILKLADFGSCRGIYSKPP---YTEYISTRWYRA  166 (282)
T ss_pred             cCCCCHHHHHHHHHHHHHHHHHHHHCC---ceecccCHHHEEEcC-CCeEEEecccccccccCCC---cCCCCCCcccCC
Confidence            457899999999999999999999999   999999999999999 9999999999876533221   122346778999


Q ss_pred             cccccC-CCcccccceEehhHHHHHHHhcccCCCCcCCCcccccccc-cC----------CCccccCccccC--CcC---
Q 041793           84 PEYASD-GKFSVKSDVFSFGILLLEIISGKKNRGFYHSDNKLNLIGH-VS----------MPSQLIDPCIQG--SFN---  146 (224)
Q Consensus        84 PE~~~~-~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~-~~----------~~~~~~~~~~~~--~~~---  146 (224)
                      ||.+.+ ..++.++|+|||||++++|++|..||......+....... ..          ............  ...   
T Consensus       167 PE~~~~~~~~~~~~Di~slGv~l~el~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  246 (282)
T cd07831         167 PECLLTDGYYGPKMDIWAVGCVFFEILSLFPLFPGTNELDQIAKIHDVLGTPDAEVLKKFRKSRHMNYNFPSKKGTGLRK  246 (282)
T ss_pred             hhHhhcCCCCCcchhHHHHHHHHHHHHcCCcCCCCCCHHHHHHHHHHHcCCCCHHHHHhhcccccccccCcccccccHHH
Confidence            997654 4568899999999999999999999865332111100000 00          000000000000  000   


Q ss_pred             --HHHHHHHHHHHHHhccCCCCCCCChHHHHH
Q 041793          147 --LVEVIRCIHIGLLCVQQHPKDRPSMPSVIL  176 (224)
Q Consensus       147 --~~~~~~~~~li~~cl~~dp~~Rps~~~v~~  176 (224)
                        ......+.+++.+||+.+|++||+++++++
T Consensus       247 ~~~~~~~~~~~li~~~l~~~P~~R~~~~~~l~  278 (282)
T cd07831         247 LLPNASAEGLDLLKKLLAYDPDERITAKQALR  278 (282)
T ss_pred             HcccccHHHHHHHHHHhccCcccccCHHHHhh
Confidence              011346788999999999999999999975


No 281
>cd05611 STKc_Rim15_like Catalytic domain of fungal Rim15-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, fungal Rim15-like kinases, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include Saccharomyces cerevisiae Rim15, Schizosaccharomyces pombe cek1, and similar fungal proteins. They contain a central catalytic domain, which contains an insert relative to MAST kinases. In addition, Rim15 contains a C-terminal signal receiver (REC) domain while cek1 contains an N-terminal PAS domain. Rim15 (or Rim15p) functions as a regulator of meiosis. It acts as a do
Probab=99.93  E-value=4.2e-26  Score=179.88  Aligned_cols=161  Identities=24%  Similarity=0.220  Sum_probs=120.7

Q ss_pred             CCCCChHHHHHHHHHHHHHHhhhhcCCCCceEecCCCCCceEECCCCCceEeeecceeecCCCCCCCcccccccccccCC
Q 041793            4 CKILDWPKRFHIICGTARGVMYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDEIEGNTNRVIGTYGYMA   83 (224)
Q Consensus         4 ~~~l~~~~~~~i~~qi~~~l~~Lh~~~~~~i~H~dl~~~nil~~~~~~~kl~df~~~~~~~~~~~~~~~~~~~~~~~y~a   83 (224)
                      .+.+++..+..++.||+.||.|||+.+   ++|+||+|+||+++.++.++++|||++.....      .....++..|++
T Consensus        91 ~~~~~~~~~~~i~~qi~~aL~~lH~~~---i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~------~~~~~~~~~y~~  161 (260)
T cd05611          91 LGGLPEDWAKQYIAEVVLGVEDLHQRG---IIHRDIKPENLLIDQTGHLKLTDFGLSRNGLE------NKKFVGTPDYLA  161 (260)
T ss_pred             cCCCCHHHHHHHHHHHHHHHHHHHHCC---eecCCCCHHHeEECCCCcEEEeecccceeccc------cccCCCCcCccC
Confidence            357899999999999999999999999   99999999999999999999999998875432      122356778999


Q ss_pred             cccccCCCcccccceEehhHHHHHHHhcccCCCCcCCCcccccccccCCCccccCccccCCcCHHHHHHHHHHHHHhccC
Q 041793           84 PEYASDGKFSVKSDVFSFGILLLEIISGKKNRGFYHSDNKLNLIGHVSMPSQLIDPCIQGSFNLVEVIRCIHIGLLCVQQ  163 (224)
Q Consensus        84 PE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~  163 (224)
                      ||.+.+..++.++|+||||++++++++|..||............   ...............    ...+.+++.+||+.
T Consensus       162 pe~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~~---~~~~~~~~~~~~~~~----~~~~~~~i~~~l~~  234 (260)
T cd05611         162 PETILGVGDDKMSDWWSLGCVIFEFLFGYPPFHAETPDAVFDNI---LSRRINWPEEVKEFC----SPEAVDLINRLLCM  234 (260)
T ss_pred             hhhhcCCCCcchhhhHHHHHHHHHHHHCCCCCCCCCHHHHHHHH---HhcccCCCCcccccC----CHHHHHHHHHHccC
Confidence            99998888899999999999999999999998543322111111   000000010111111    13467889999999


Q ss_pred             CCCCCCChHHHHHHhcc
Q 041793          164 HPKDRPSMPSVILMLGS  180 (224)
Q Consensus       164 dp~~Rps~~~v~~~L~~  180 (224)
                      +|++||++..+.+.|..
T Consensus       235 ~p~~R~~~~~~~~~l~~  251 (260)
T cd05611         235 DPAKRLGANGYQEIKSH  251 (260)
T ss_pred             CHHHccCCCcHHHHHcC
Confidence            99999988777666643


No 282
>cd05609 STKc_MAST Catalytic domain of the Protein Serine/Threonine Kinase, Microtubule-associated serine/threonine kinase. Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, MAST, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. There are four mammalian MAST kinases, named MAST1-MAST4. MAST1 is also referred to as syntrophin-associated STK (SAST), while MAST2 is also called MAST205. MAST kinases are cytoskeletal associated kinases of unknown function that a
Probab=99.93  E-value=4.1e-26  Score=184.28  Aligned_cols=167  Identities=23%  Similarity=0.238  Sum_probs=120.9

Q ss_pred             CCCCChHHHHHHHHHHHHHHhhhhcCCCCceEecCCCCCceEECCCCCceEeeecceeecCCCCC-------------CC
Q 041793            4 CKILDWPKRFHIICGTARGVMYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDEI-------------EG   70 (224)
Q Consensus         4 ~~~l~~~~~~~i~~qi~~~l~~Lh~~~~~~i~H~dl~~~nil~~~~~~~kl~df~~~~~~~~~~~-------------~~   70 (224)
                      .+.+++..+..++.|++.||.|||+.+   ++|+||+|.||+++.++.++++|||++........             ..
T Consensus        95 ~~~~~~~~~~~~~~~i~~~l~~lH~~~---i~H~dl~p~NIll~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~  171 (305)
T cd05609          95 IGALPVDMARMYFAETVLALEYLHNYG---IVHRDLKPDNLLITSMGHIKLTDFGLSKIGLMSLTTNLYEGHIEKDTREF  171 (305)
T ss_pred             cCCCCHHHHHHHHHHHHHHHHHHHHCC---ccccCCchHHEEECCCCCEEEeeCCCccccCcCccccccccccccchhhc
Confidence            457899999999999999999999999   99999999999999999999999998763211000             00


Q ss_pred             cccccccccccCCcccccCCCcccccceEehhHHHHHHHhcccCCCCcCCCcccccccccCCCccccCccccCCcCHHHH
Q 041793           71 NTNRVIGTYGYMAPEYASDGKFSVKSDVFSFGILLLEIISGKKNRGFYHSDNKLNLIGHVSMPSQLIDPCIQGSFNLVEV  150 (224)
Q Consensus        71 ~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  150 (224)
                      ......++..|+|||.+.+..++.++|+||||+++|++++|..||......   ......... ....+......    .
T Consensus       172 ~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~vl~el~~g~~pf~~~~~~---~~~~~~~~~-~~~~~~~~~~~----~  243 (305)
T cd05609         172 LDKQVCGTPEYIAPEVILRQGYGKPVDWWAMGIILYEFLVGCVPFFGDTPE---ELFGQVISD-DIEWPEGDEAL----P  243 (305)
T ss_pred             cccCCccCccccCchhccCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHH---HHHHHHHhc-ccCCCCccccC----C
Confidence            011234567899999998888999999999999999999999998543222   111111100 00011111111    1


Q ss_pred             HHHHHHHHHhccCCCCCCCChHHHHHHhccC
Q 041793          151 IRCIHIGLLCVQQHPKDRPSMPSVILMLGSE  181 (224)
Q Consensus       151 ~~~~~li~~cl~~dp~~Rps~~~v~~~L~~~  181 (224)
                      ..+.+++.+||+.||++||+..++.+.|+..
T Consensus       244 ~~~~~li~~~l~~~P~~R~~~~~~~~ll~~~  274 (305)
T cd05609         244 ADAQDLISRLLRQNPLERLGTGGAFEVKQHR  274 (305)
T ss_pred             HHHHHHHHHHhccChhhccCccCHHHHHhCc
Confidence            2356889999999999999987777777664


No 283
>PHA03390 pk1 serine/threonine-protein kinase 1; Provisional
Probab=99.93  E-value=3.9e-26  Score=181.11  Aligned_cols=155  Identities=23%  Similarity=0.279  Sum_probs=118.5

Q ss_pred             CCCCChHHHHHHHHHHHHHHhhhhcCCCCceEecCCCCCceEECCCC-CceEeeecceeecCCCCCCCcccccccccccC
Q 041793            4 CKILDWPKRFHIICGTARGVMYLHQDSRLRIIHRDLKASNVLLDQDM-NPKISDFGLARAFGGDEIEGNTNRVIGTYGYM   82 (224)
Q Consensus         4 ~~~l~~~~~~~i~~qi~~~l~~Lh~~~~~~i~H~dl~~~nil~~~~~-~~kl~df~~~~~~~~~~~~~~~~~~~~~~~y~   82 (224)
                      ++.+++.+++.++.||+.||.|||+.|   ++|+||+|+||+++.++ .++++|||++......      ....++..|+
T Consensus       103 ~~~l~~~~~~~~~~qi~~~l~~lH~~~---i~H~dl~p~nil~~~~~~~~~l~dfg~~~~~~~~------~~~~~~~~y~  173 (267)
T PHA03390        103 EGKLSEAEVKKIIRQLVEALNDLHKHN---IIHNDIKLENVLYDRAKDRIYLCDYGLCKIIGTP------SCYDGTLDYF  173 (267)
T ss_pred             cCCCCHHHHHHHHHHHHHHHHHHHhCC---eeeCCCCHHHEEEeCCCCeEEEecCccceecCCC------ccCCCCCccc
Confidence            348899999999999999999999999   99999999999999988 9999999998765322      1235677899


Q ss_pred             CcccccCCCcccccceEehhHHHHHHHhcccCCCCcCCCcc--cccccccCCCccccCccccCCcCHHHHHHHHHHHHHh
Q 041793           83 APEYASDGKFSVKSDVFSFGILLLEIISGKKNRGFYHSDNK--LNLIGHVSMPSQLIDPCIQGSFNLVEVIRCIHIGLLC  160 (224)
Q Consensus        83 aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~c  160 (224)
                      |||.+.+..++.++|+||||++++++++|+.||........  .......   ... .... .    .....+.+++.+|
T Consensus       174 aPE~~~~~~~~~~~DvwslG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~---~~~-~~~~-~----~~~~~~~~li~~~  244 (267)
T PHA03390        174 SPEKIKGHNYDVSFDWWAVGVLTYELLTGKHPFKEDEDEELDLESLLKRQ---QKK-LPFI-K----NVSKNANDFVQSM  244 (267)
T ss_pred             ChhhhcCCCCCchhhHHHHHHHHHHHHHCCCCCCCCCcchhhHHHHHHhh---ccc-CCcc-c----ccCHHHHHHHHHH
Confidence            99999888899999999999999999999999863322211  0011111   100 0000 0    1123467888999


Q ss_pred             ccCCCCCCCC-hHHHHH
Q 041793          161 VQQHPKDRPS-MPSVIL  176 (224)
Q Consensus       161 l~~dp~~Rps-~~~v~~  176 (224)
                      |+.+|.+||+ ++++++
T Consensus       245 l~~~p~~R~~~~~~~l~  261 (267)
T PHA03390        245 LKYNINYRLTNYNEIIK  261 (267)
T ss_pred             hccChhhCCchHHHHhc
Confidence            9999999995 688864


No 284
>cd07866 STKc_BUR1 Catalytic domain of the Serine/Threonine Kinase, Fungal Cyclin-Dependent protein Kinase Bypass UAS Requirement 1 and similar proteins. Serine/Threonine Kinases (STKs), Bypass UAS Requirement 1 (BUR1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The BUR1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. BUR1, also called SGV1, is a yeast Cyclin-Dependent protein Kinase (CDK) that is functionally equivalent to mammalian CDK9. It associates with the cyclin BUR2. BUR genes were orginally identified in a genetic 
Probab=99.93  E-value=2.8e-26  Score=185.20  Aligned_cols=170  Identities=22%  Similarity=0.291  Sum_probs=118.9

Q ss_pred             CCCCChHHHHHHHHHHHHHHhhhhcCCCCceEecCCCCCceEECCCCCceEeeecceeecCCCCCCC---------cccc
Q 041793            4 CKILDWPKRFHIICGTARGVMYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDEIEG---------NTNR   74 (224)
Q Consensus         4 ~~~l~~~~~~~i~~qi~~~l~~Lh~~~~~~i~H~dl~~~nil~~~~~~~kl~df~~~~~~~~~~~~~---------~~~~   74 (224)
                      ...+++.++..++.||+.||.|||+.|   ++|+||+|+||+++.++.++++|||++..........         ....
T Consensus       109 ~~~~~~~~~~~i~~~l~~al~~lH~~~---i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~  185 (311)
T cd07866         109 SVKLTESQIKCYMLQLLEGINYLHENH---ILHRDIKAANILIDNQGILKIADFGLARPYDGPPPNPKGGGGGGTRKYTN  185 (311)
T ss_pred             ccCCCHHHHHHHHHHHHHHHHHHHhCC---eecCCCCHHHEEECCCCCEEECcCccchhccCCCcccccCCccccccccc
Confidence            457999999999999999999999999   9999999999999999999999999987653321110         1112


Q ss_pred             cccccccCCcccccCC-CcccccceEehhHHHHHHHhcccCCCCcCCCccccccccc-CCC-----------ccccC--c
Q 041793           75 VIGTYGYMAPEYASDG-KFSVKSDVFSFGILLLEIISGKKNRGFYHSDNKLNLIGHV-SMP-----------SQLID--P  139 (224)
Q Consensus        75 ~~~~~~y~aPE~~~~~-~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~-~~~-----------~~~~~--~  139 (224)
                      ..++..|+|||.+.+. .++.++|+||||+++++|++|+.||...........+... ..+           ....+  .
T Consensus       186 ~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~il~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  265 (311)
T cd07866         186 LVVTRWYRPPELLLGERRYTTAVDIWGIGCVFAEMFTRRPILQGKSDIDQLHLIFKLCGTPTEETWPGWRSLPGCEGVHS  265 (311)
T ss_pred             ceeccCcCChHHhhCCCccCchhHhHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCChhhchhhhhccccccccc
Confidence            3456779999987654 4789999999999999999999998643332211110000 000           00000  0


Q ss_pred             cccCCcCHH-----HHHHHHHHHHHhccCCCCCCCChHHHHH
Q 041793          140 CIQGSFNLV-----EVIRCIHIGLLCVQQHPKDRPSMPSVIL  176 (224)
Q Consensus       140 ~~~~~~~~~-----~~~~~~~li~~cl~~dp~~Rps~~~v~~  176 (224)
                      .........     ....+.+++.+||+.||++|||+.+++.
T Consensus       266 ~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~R~t~~ell~  307 (311)
T cd07866         266 FTNYPRTLEERFGKLGPEGLDLLSKLLSLDPYKRLTASDALE  307 (311)
T ss_pred             CCCCCccHHHHcccCChhHHHHHHHHcccCcccCcCHHHHhc
Confidence            000000111     1145778999999999999999999864


No 285
>cd05578 STKc_Yank1 Catalytic domain of the Protein Serine/Threonine Kinase, Yank1. Serine/Threonine Kinases (STKs), Yank1 or STK32A subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Yank1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily contains uncharacterized STKs with similarity to the human protein designated Yank1 or STK32A.
Probab=99.93  E-value=7.1e-26  Score=178.38  Aligned_cols=157  Identities=26%  Similarity=0.338  Sum_probs=120.6

Q ss_pred             CCCChHHHHHHHHHHHHHHhhhhcCCCCceEecCCCCCceEECCCCCceEeeecceeecCCCCCCCcccccccccccCCc
Q 041793            5 KILDWPKRFHIICGTARGVMYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDEIEGNTNRVIGTYGYMAP   84 (224)
Q Consensus         5 ~~l~~~~~~~i~~qi~~~l~~Lh~~~~~~i~H~dl~~~nil~~~~~~~kl~df~~~~~~~~~~~~~~~~~~~~~~~y~aP   84 (224)
                      ..+++.+++.++.||+.||.|||+.+   ++|+||+|+||+++.++.++++|||.+.......   ......++..|++|
T Consensus        95 ~~l~~~~~~~~~~~i~~~l~~lh~~~---i~h~dl~~~nil~~~~~~~~l~d~~~~~~~~~~~---~~~~~~~~~~y~~P  168 (258)
T cd05578          95 VKFSEEQVKFWICEIVLALEYLHSKG---IIHRDIKPDNILLDEQGHVHITDFNIATKVTPDT---LTTSTSGTPGYMAP  168 (258)
T ss_pred             CCcCHHHHHHHHHHHHHHHHHHHhCC---eeccCCCHHHeEEcCCCCEEEeecccccccCCCc---cccccCCChhhcCH
Confidence            47899999999999999999999999   9999999999999999999999999987654322   12234567789999


Q ss_pred             ccccCCCcccccceEehhHHHHHHHhcccCCCCcCCCcccccccccCCCccccCccccCCcCHHHHHHHHHHHHHhccCC
Q 041793           85 EYASDGKFSVKSDVFSFGILLLEIISGKKNRGFYHSDNKLNLIGHVSMPSQLIDPCIQGSFNLVEVIRCIHIGLLCVQQH  164 (224)
Q Consensus        85 E~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~d  164 (224)
                      |.+.+..++.++|+||||++++++++|..||........................    .    ....+.+++.+||+.|
T Consensus       169 E~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~----~----~~~~~~~~i~~~l~~~  240 (258)
T cd05578         169 EVLCRQGYSVAVDWWSLGVTAYECLRGKRPYRGHSRTIRDQIRAKQETADVLYPA----T----WSTEAIDAINKLLERD  240 (258)
T ss_pred             HHHcccCCCCcccchhhHHHHHHHHhCCCCCCCCCccHHHHHHHHhccccccCcc----c----CcHHHHHHHHHHccCC
Confidence            9998888899999999999999999999998755432122222111111111111    1    1145778999999999


Q ss_pred             CCCCCCh--HHHH
Q 041793          165 PKDRPSM--PSVI  175 (224)
Q Consensus       165 p~~Rps~--~~v~  175 (224)
                      |.+||++  ++++
T Consensus       241 p~~R~~~~~~~l~  253 (258)
T cd05578         241 PQKRLGDNLKDLK  253 (258)
T ss_pred             hhHcCCccHHHHh
Confidence            9999999  6654


No 286
>cd05572 STKc_cGK_PKG Catalytic domain of the Protein Serine/Threonine Kinase, cGMP-dependent protein kinase. Serine/Threonine Kinases (STKs), cGMP-dependent protein kinase (cGK or PKG) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Mammals have two cGK isoforms from different genes, cGKI and cGKII. cGKI exists as two splice variants, cGKI-alpha and cGKI-beta. cGK consists of an N-terminal regulatory domain containing a dimerization and an autoinhibitory pseudosubstrate region, two cGMP-binding domains, and a C-terminal catalytic domain. Binding of cGMP to both binding sites releases the inhibition of the catalytic center by the pseudosubstrate region, allowi
Probab=99.93  E-value=7.8e-26  Score=178.55  Aligned_cols=159  Identities=25%  Similarity=0.370  Sum_probs=120.7

Q ss_pred             CCCCChHHHHHHHHHHHHHHhhhhcCCCCceEecCCCCCceEECCCCCceEeeecceeecCCCCCCCcccccccccccCC
Q 041793            4 CKILDWPKRFHIICGTARGVMYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDEIEGNTNRVIGTYGYMA   83 (224)
Q Consensus         4 ~~~l~~~~~~~i~~qi~~~l~~Lh~~~~~~i~H~dl~~~nil~~~~~~~kl~df~~~~~~~~~~~~~~~~~~~~~~~y~a   83 (224)
                      .+.+++.++..++.||+.||+|||+.+   ++|+||+|+||+++.++.++|+|||++.......   ......++..|++
T Consensus        87 ~~~l~~~~~~~~~~~i~~~l~~lH~~~---~~h~dl~~~nilv~~~~~~~l~df~~~~~~~~~~---~~~~~~~~~~~~~  160 (262)
T cd05572          87 RGLFDEYTARFYIACVVLAFEYLHNRG---IIYRDLKPENLLLDSNGYVKLVDFGFAKKLKSGQ---KTWTFCGTPEYVA  160 (262)
T ss_pred             cCCCCHHHHHHHHHHHHHHHHHHhhCC---cccCCCCHHHEEEcCCCCEEEeeCCcccccCccc---ccccccCCcCccC
Confidence            456899999999999999999999999   9999999999999999999999999998764332   1223456778999


Q ss_pred             cccccCCCcccccceEehhHHHHHHHhcccCCCCcCCCcccccccccCC-CccccCccccCCcCHHHHHHHHHHHHHhcc
Q 041793           84 PEYASDGKFSVKSDVFSFGILLLEIISGKKNRGFYHSDNKLNLIGHVSM-PSQLIDPCIQGSFNLVEVIRCIHIGLLCVQ  162 (224)
Q Consensus        84 PE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~li~~cl~  162 (224)
                      ||.+.+..++.++|+||||+++|++++|..||.....+. ......... ....   ..+...    ...+.+++.+||+
T Consensus       161 PE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~-~~~~~~~~~~~~~~---~~~~~~----~~~~~~~i~~~l~  232 (262)
T cd05572         161 PEIILNKGYDFSVDYWSLGILLYELLTGRPPFGEDDEDP-MEIYNDILKGNGKL---EFPNYI----DKAAKDLIKQLLR  232 (262)
T ss_pred             hhHhcCCCCCChhhhhhhHHHHHHHHhCCCCcCCCCCCH-HHHHHHHhccCCCC---CCCccc----CHHHHHHHHHHcc
Confidence            999888888999999999999999999999986544211 111111110 0110   001111    2357789999999


Q ss_pred             CCCCCCCC-----hHHHHH
Q 041793          163 QHPKDRPS-----MPSVIL  176 (224)
Q Consensus       163 ~dp~~Rps-----~~~v~~  176 (224)
                      .+|++||+     ++|+++
T Consensus       233 ~~p~~R~~~~~~~~~~l~~  251 (262)
T cd05572         233 RNPEERLGNLKGGIKDIKK  251 (262)
T ss_pred             CChhhCcCCcccCHHHHhc
Confidence            99999999     777765


No 287
>cd08530 STKc_CNK2-like Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii CNK2,  and similar domains. Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii Never In Mitosis gene A (NIMA)-related kinase 1 (CNK2)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii CNK2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes CNK1, and -2.  The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.  Chlamydomonas reinhardtii CNK2 has both cilliary and cell cycle functions. It influences flagellar length through promoting flagellar disassembly, an
Probab=99.93  E-value=6.4e-26  Score=178.08  Aligned_cols=157  Identities=27%  Similarity=0.341  Sum_probs=122.5

Q ss_pred             CCCCChHHHHHHHHHHHHHHhhhhcCCCCceEecCCCCCceEECCCCCceEeeecceeecCCCCCCCcccccccccccCC
Q 041793            4 CKILDWPKRFHIICGTARGVMYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDEIEGNTNRVIGTYGYMA   83 (224)
Q Consensus         4 ~~~l~~~~~~~i~~qi~~~l~~Lh~~~~~~i~H~dl~~~nil~~~~~~~kl~df~~~~~~~~~~~~~~~~~~~~~~~y~a   83 (224)
                      +..+++..++.++.|++.||.|||+.|   ++|+||+|.||+++.++.++|+|||++......    ......++..|++
T Consensus        97 ~~~~~~~~~~~~~~~l~~al~~lh~~~---i~h~~l~~~ni~~~~~~~~kl~d~g~~~~~~~~----~~~~~~~~~~~~~  169 (256)
T cd08530          97 RKLIPEQEIWRIFIQLLRGLQALHEQK---ILHRDLKSANILLVANDLVKIGDLGISKVLKKN----MAKTQIGTPHYMA  169 (256)
T ss_pred             cCCCCHHHHHHHHHHHHHHHHHHhhCC---cccCCCCcceEEEecCCcEEEeeccchhhhccC----CcccccCCccccC
Confidence            467899999999999999999999999   999999999999999999999999998766443    1122356778999


Q ss_pred             cccccCCCcccccceEehhHHHHHHHhcccCCCCcCCCcccccccccCCCccccCccccCCcCHHHHHHHHHHHHHhccC
Q 041793           84 PEYASDGKFSVKSDVFSFGILLLEIISGKKNRGFYHSDNKLNLIGHVSMPSQLIDPCIQGSFNLVEVIRCIHIGLLCVQQ  163 (224)
Q Consensus        84 PE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~  163 (224)
                      ||.+.+..++.++|+||||++++++++|+.||.................+      .    ........+.+++.+||+.
T Consensus       170 Pe~~~~~~~~~~~D~~slG~~~~~l~~g~~p~~~~~~~~~~~~~~~~~~~------~----~~~~~~~~~~~li~~~l~~  239 (256)
T cd08530         170 PEVWKGRPYSYKSDIWSLGCLLYEMATFAPPFEARSMQDLRYKVQRGKYP------P----IPPIYSQDLQNFIRSMLQV  239 (256)
T ss_pred             HHHHCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHhcCCCC------C----CchhhCHHHHHHHHHHcCC
Confidence            99998888899999999999999999999998654432211111111100      0    1112234578899999999


Q ss_pred             CCCCCCChHHHHHH
Q 041793          164 HPKDRPSMPSVILM  177 (224)
Q Consensus       164 dp~~Rps~~~v~~~  177 (224)
                      +|++||++.++++.
T Consensus       240 ~p~~Rp~~~~~l~~  253 (256)
T cd08530         240 KPKLRPNCDKILAS  253 (256)
T ss_pred             CcccCCCHHHHhcC
Confidence            99999999999753


No 288
>cd06618 PKc_MKK7 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 7. Protein kinases (PKs), MAP kinase kinase 7 (MKK7) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK7 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK7 is a dual-specificity PK that phosphorylates and activates it
Probab=99.93  E-value=4.1e-26  Score=183.49  Aligned_cols=161  Identities=23%  Similarity=0.383  Sum_probs=117.6

Q ss_pred             CCCCChHHHHHHHHHHHHHHhhhhc-CCCCceEecCCCCCceEECCCCCceEeeecceeecCCCCCCCcccccccccccC
Q 041793            4 CKILDWPKRFHIICGTARGVMYLHQ-DSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDEIEGNTNRVIGTYGYM   82 (224)
Q Consensus         4 ~~~l~~~~~~~i~~qi~~~l~~Lh~-~~~~~i~H~dl~~~nil~~~~~~~kl~df~~~~~~~~~~~~~~~~~~~~~~~y~   82 (224)
                      .+.+++.++..++.||+.||.|||+ .+   ++|+||+|+||+++.++.++|+|||++........   .....++..|+
T Consensus       108 ~~~l~~~~~~~i~~~i~~~l~~lH~~~~---i~H~dl~p~nill~~~~~~kL~dfg~~~~~~~~~~---~~~~~~~~~y~  181 (296)
T cd06618         108 QGPIPEDILGKMTVAIVKALHYLKEKHG---VIHRDVKPSNILLDASGNVKLCDFGISGRLVDSKA---KTRSAGCAAYM  181 (296)
T ss_pred             cCCCCHHHHHHHHHHHHHHHHHHHhhCC---EecCCCcHHHEEEcCCCCEEECccccchhccCCCc---ccCCCCCcccc
Confidence            3578999999999999999999997 47   99999999999999999999999999876533211   12234567899


Q ss_pred             CcccccCCC----cccccceEehhHHHHHHHhcccCCCCcCCCcccccccccCCCccccCccccCCcCHHHHHHHHHHHH
Q 041793           83 APEYASDGK----FSVKSDVFSFGILLLEIISGKKNRGFYHSDNKLNLIGHVSMPSQLIDPCIQGSFNLVEVIRCIHIGL  158 (224)
Q Consensus        83 aPE~~~~~~----~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~  158 (224)
                      |||.+.+..    ++.++|+||||+++|+|++|+.||......  ........... .  +......  .....+.+++.
T Consensus       182 aPE~~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~--~~~~~~~~~~~-~--~~~~~~~--~~~~~l~~li~  254 (296)
T cd06618         182 APERIDPPDPNPKYDIRADVWSLGISLVELATGQFPYKNCKTE--FEVLTKILQEE-P--PSLPPNE--GFSPDFCSFVD  254 (296)
T ss_pred             CHhhcCCCCCccccccchhHHHHHHHHHHHHhCCCCCCcchhH--HHHHHHHhcCC-C--CCCCCCC--CCCHHHHHHHH
Confidence            999987553    788999999999999999999998643221  11111110000 0  0000000  01134678899


Q ss_pred             HhccCCCCCCCChHHHHHH
Q 041793          159 LCVQQHPKDRPSMPSVILM  177 (224)
Q Consensus       159 ~cl~~dp~~Rps~~~v~~~  177 (224)
                      +||+.||++||+++++++.
T Consensus       255 ~~l~~~p~~Rp~~~~il~~  273 (296)
T cd06618         255 LCLTKDHRKRPKYRELLQH  273 (296)
T ss_pred             HHccCChhhCCCHHHHhcC
Confidence            9999999999999999765


No 289
>cd07858 STKc_TEY_MAPK_plant Catalytic domain of the Serine/Threonine Kinases, TEY Mitogen-Activated Protein Kinases from Plants. Serine/Threonine Kinases (STKs), Plant TEY Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TEY MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. In plants, MAPKs are associated with physiological, developmental, hormonal, and stress responses. Some plants show numerous gene duplications of MAPKs. Arabidopsis thaliana harbors at least 20 MAPKs, named AtMPK1-20. There are two subtypes of plant MAPKs based on the conserved phosphorylation motif present in the activati
Probab=99.93  E-value=6.6e-26  Score=185.60  Aligned_cols=169  Identities=24%  Similarity=0.292  Sum_probs=120.6

Q ss_pred             CCCCCChHHHHHHHHHHHHHHhhhhcCCCCceEecCCCCCceEECCCCCceEeeecceeecCCCCCCCcccccccccccC
Q 041793            3 RCKILDWPKRFHIICGTARGVMYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDEIEGNTNRVIGTYGYM   82 (224)
Q Consensus         3 ~~~~l~~~~~~~i~~qi~~~l~~Lh~~~~~~i~H~dl~~~nil~~~~~~~kl~df~~~~~~~~~~~~~~~~~~~~~~~y~   82 (224)
                      +.+.+++..++.++.||+.||.|||+.+   ++|+||+|+||+++.++.++|+|||++.......  .......++..|+
T Consensus       101 ~~~~l~~~~~~~i~~qi~~aL~~LH~~~---i~H~dlkp~Nil~~~~~~~kL~Dfg~~~~~~~~~--~~~~~~~~~~~y~  175 (337)
T cd07858         101 SSQTLSDDHCQYFLYQLLRGLKYIHSAN---VLHRDLKPSNLLLNANCDLKICDFGLARTTSEKG--DFMTEYVVTRWYR  175 (337)
T ss_pred             cCCCCCHHHHHHHHHHHHHHHHHHHhCC---EecCCCCHHHEEEcCCCCEEECcCccccccCCCc--ccccccccccCcc
Confidence            3467899999999999999999999999   9999999999999999999999999987654321  1122345677899


Q ss_pred             CcccccC-CCcccccceEehhHHHHHHHhcccCCCCcCCCcccccccc------------cC---------CCccccCcc
Q 041793           83 APEYASD-GKFSVKSDVFSFGILLLEIISGKKNRGFYHSDNKLNLIGH------------VS---------MPSQLIDPC  140 (224)
Q Consensus        83 aPE~~~~-~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~------------~~---------~~~~~~~~~  140 (224)
                      |||.+.+ ..++.++|+||||+++++|++|..||...........+..            ..         ......+..
T Consensus       176 aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  255 (337)
T cd07858         176 APELLLNCSEYTTAIDVWSVGCIFAELLGRKPLFPGKDYVHQLKLITELLGSPSEEDLGFIRNEKARRYIRSLPYTPRQS  255 (337)
T ss_pred             ChHHHhcCCCCCCcccHHHHHHHHHHHHcCCCCCCCCChHHHHHHHHHHhCCCChHHhhhcCchhhhHHHHhcCcccccC
Confidence            9998764 4578999999999999999999999854321110000000            00         000000000


Q ss_pred             ccCCcCHHHHHHHHHHHHHhccCCCCCCCChHHHHHH
Q 041793          141 IQGSFNLVEVIRCIHIGLLCVQQHPKDRPSMPSVILM  177 (224)
Q Consensus       141 ~~~~~~~~~~~~~~~li~~cl~~dp~~Rps~~~v~~~  177 (224)
                      ..... ......+.+++.+||+.+|++|||++++++.
T Consensus       256 ~~~~~-~~~~~~~~~li~~~l~~~P~~Rps~~ell~h  291 (337)
T cd07858         256 FARLF-PHANPLAIDLLEKMLVFDPSKRITVEEALAH  291 (337)
T ss_pred             HHHHc-ccCCHHHHHHHHHHhcCChhhccCHHHHHcC
Confidence            00000 0012346789999999999999999999876


No 290
>cd07834 STKc_MAPK Catalytic domain of the Serine/Threonine Kinase, Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs serve as important mediators of cellular responses to extracellular signals. They control critical cellular functions including differentiation, proliferation, migration, and apoptosis. They are also implicated in the pathogenesis of many diseases including multiple types of cancer, stroke, diabetes, and chronic inflammation. Typical MAPK pathways involve a triple kinase core cascade comprising of the MAPK, which is phosphorylated and
Probab=99.93  E-value=7.8e-26  Score=184.45  Aligned_cols=171  Identities=28%  Similarity=0.348  Sum_probs=122.5

Q ss_pred             CCCCChHHHHHHHHHHHHHHhhhhcCCCCceEecCCCCCceEECCCCCceEeeecceeecCCCCCC-CcccccccccccC
Q 041793            4 CKILDWPKRFHIICGTARGVMYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDEIE-GNTNRVIGTYGYM   82 (224)
Q Consensus         4 ~~~l~~~~~~~i~~qi~~~l~~Lh~~~~~~i~H~dl~~~nil~~~~~~~kl~df~~~~~~~~~~~~-~~~~~~~~~~~y~   82 (224)
                      +..+++..++.++.||+.||+|||+.|   ++|+||+|.||+++.++.++|+|||++......... .......++..|+
T Consensus        97 ~~~l~~~~~~~i~~~l~~~l~~LH~~g---i~H~dlkp~nili~~~~~~~L~dfg~~~~~~~~~~~~~~~~~~~~~~~y~  173 (330)
T cd07834          97 PQPLTDDHIQYFLYQILRGLKYLHSAN---VIHRDLKPSNILVNSNCDLKICDFGLARGVDPDEDEKGFLTEYVVTRWYR  173 (330)
T ss_pred             CCCCCHHHHHHHHHHHHHHHHHHHhCC---eecCCCCHHHEEEcCCCCEEEcccCceEeecccccccccccccccccCcC
Confidence            347899999999999999999999999   999999999999999999999999999876543211 1122245677899


Q ss_pred             CcccccCC-CcccccceEehhHHHHHHHhcccCCCCcCCCcccccc-cccCCCc-c------------ccC-ccccCCcC
Q 041793           83 APEYASDG-KFSVKSDVFSFGILLLEIISGKKNRGFYHSDNKLNLI-GHVSMPS-Q------------LID-PCIQGSFN  146 (224)
Q Consensus        83 aPE~~~~~-~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~-~~~~~~~-~------------~~~-~~~~~~~~  146 (224)
                      |||.+.+. .++.++|+||||+++++|++|..||...........+ .....+. .            ... .......+
T Consensus       174 aPE~~~~~~~~~~~sDi~slG~il~~l~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  253 (330)
T cd07834         174 APELLLSSSRYTKAIDIWSVGCIFAELLTRKPLFPGRDYIDQLNLIVEVLGTPSEEDLKFITSEKARNYLKSLPKKPKKP  253 (330)
T ss_pred             CceeeecccCCCcchhHHHHHHHHHHHHcCCCCcCCCCHHHHHHHHHHhcCCCChhHhhhccccchhhHHhhcccCCcch
Confidence            99999877 7889999999999999999999998644321111000 0000000 0            000 00000000


Q ss_pred             HH-----HHHHHHHHHHHhccCCCCCCCChHHHHHH
Q 041793          147 LV-----EVIRCIHIGLLCVQQHPKDRPSMPSVILM  177 (224)
Q Consensus       147 ~~-----~~~~~~~li~~cl~~dp~~Rps~~~v~~~  177 (224)
                      ..     ....+.+++.+||+.+|++||+++++++.
T Consensus       254 ~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~ll~~  289 (330)
T cd07834         254 LSKLFPGASPEAIDLLEKMLVFDPKKRITADEALAH  289 (330)
T ss_pred             hHHhcccCCHHHHHHHHHHccCChhhCCCHHHHHhC
Confidence            00     12346789999999999999999999874


No 291
>cd08218 STKc_Nek1 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 1. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 1 (Nek1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek1 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek1 is associated with centrosomes throughout the cell cycle. It is involved in the formation of primary cilium and in the maintenance of centrosomes. It cycles through the nucleus and may be capable of relaying signals between the cilium and the nucleus. Nek1 is implicated in the development of polycysti
Probab=99.93  E-value=6.9e-26  Score=178.19  Aligned_cols=157  Identities=24%  Similarity=0.354  Sum_probs=119.4

Q ss_pred             CCCChHHHHHHHHHHHHHHhhhhcCCCCceEecCCCCCceEECCCCCceEeeecceeecCCCCCCCcccccccccccCCc
Q 041793            5 KILDWPKRFHIICGTARGVMYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDEIEGNTNRVIGTYGYMAP   84 (224)
Q Consensus         5 ~~l~~~~~~~i~~qi~~~l~~Lh~~~~~~i~H~dl~~~nil~~~~~~~kl~df~~~~~~~~~~~~~~~~~~~~~~~y~aP   84 (224)
                      ..+++.+++.++.|++.||.|||+.+   ++|+||+|+||+++.++.++++|||.+.........  .....++..|+||
T Consensus        96 ~~~~~~~~~~~~~~l~~~l~~lh~~~---i~h~~l~~~nil~~~~~~~~l~d~~~~~~~~~~~~~--~~~~~~~~~~~~p  170 (256)
T cd08218          96 VLFPEDQILDWFVQICLALKHVHDRK---ILHRDIKSQNIFLTKDGTIKLGDFGIARVLNSTVEL--ARTCIGTPYYLSP  170 (256)
T ss_pred             CCCCHHHHHHHHHHHHHHHHHHHhCC---EecCCCCHHHEEEcCCCCEEEeeccceeecCcchhh--hhhccCCccccCH
Confidence            35789999999999999999999999   999999999999999999999999999765432111  1223467789999


Q ss_pred             ccccCCCcccccceEehhHHHHHHHhcccCCCCcCCCcccccccccCCCccccCccccCCcCHHHHHHHHHHHHHhccCC
Q 041793           85 EYASDGKFSVKSDVFSFGILLLEIISGKKNRGFYHSDNKLNLIGHVSMPSQLIDPCIQGSFNLVEVIRCIHIGLLCVQQH  164 (224)
Q Consensus        85 E~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~d  164 (224)
                      |.+.+..++.++|+||||++++++++|+.||......   ........... .  .....    ....+.+++.+||+.+
T Consensus       171 e~~~~~~~~~~~Dv~slG~i~~~l~~g~~~~~~~~~~---~~~~~~~~~~~-~--~~~~~----~~~~~~~li~~~l~~~  240 (256)
T cd08218         171 EICENRPYNNKSDIWALGCVLYEMCTLKHAFEAGNMK---NLVLKIIRGSY-P--PVSSH----YSYDLRNLVSQLFKRN  240 (256)
T ss_pred             HHhCCCCCCCccchhHHHHHHHHHHcCCCCccCCCHH---HHHHHHhcCCC-C--CCccc----CCHHHHHHHHHHhhCC
Confidence            9998888899999999999999999999997543221   11111111010 0  00111    1234678899999999


Q ss_pred             CCCCCChHHHHH
Q 041793          165 PKDRPSMPSVIL  176 (224)
Q Consensus       165 p~~Rps~~~v~~  176 (224)
                      |++||++.+|++
T Consensus       241 p~~Rp~~~~vl~  252 (256)
T cd08218         241 PRDRPSVNSILE  252 (256)
T ss_pred             hhhCcCHHHHhh
Confidence            999999999976


No 292
>cd06632 STKc_MEKK1_plant Catalytic domain of the Protein Serine/Threonine Kinase, Plant MAP/ERK kinase kinase 1. Serine/threonine kinases (STKs), plant MAP/ERK kinase kinase 1 (MEKK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The plant MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of plant mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) including Arabidopsis thaliana MEKK1 and MAPKKK3. MEKK1 is a MAPKKK that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Arabidops
Probab=99.93  E-value=6.2e-26  Score=178.37  Aligned_cols=158  Identities=25%  Similarity=0.388  Sum_probs=120.1

Q ss_pred             CCCCChHHHHHHHHHHHHHHhhhhcCCCCceEecCCCCCceEECCCCCceEeeecceeecCCCCCCCcccccccccccCC
Q 041793            4 CKILDWPKRFHIICGTARGVMYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDEIEGNTNRVIGTYGYMA   83 (224)
Q Consensus         4 ~~~l~~~~~~~i~~qi~~~l~~Lh~~~~~~i~H~dl~~~nil~~~~~~~kl~df~~~~~~~~~~~~~~~~~~~~~~~y~a   83 (224)
                      .+.+++..++.++.||+.||.|||+.|   ++|+||+|+||+++.++.++++|||++.......   ......++..|++
T Consensus        96 ~~~~~~~~~~~~~~~i~~~l~~lH~~~---i~H~dl~~~ni~~~~~~~~kl~d~~~~~~~~~~~---~~~~~~~~~~y~~  169 (258)
T cd06632          96 YGSFPEPVIRLYTRQILLGLEYLHDRN---TVHRDIKGANILVDTNGVVKLADFGMAKQVVEFS---FAKSFKGSPYWMA  169 (258)
T ss_pred             cCCCCHHHHHHHHHHHHHHHHHHHHCC---cccCCCCHHHEEECCCCCEEEccCccceeccccc---cccccCCCcceeC
Confidence            346899999999999999999999999   9999999999999999999999999987654322   1223456778999


Q ss_pred             cccccCCC-cccccceEehhHHHHHHHhcccCCCCcCCCcccccccccCCCccccCccccCCcCHHHHHHHHHHHHHhcc
Q 041793           84 PEYASDGK-FSVKSDVFSFGILLLEIISGKKNRGFYHSDNKLNLIGHVSMPSQLIDPCIQGSFNLVEVIRCIHIGLLCVQ  162 (224)
Q Consensus        84 PE~~~~~~-~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~  162 (224)
                      ||.+.... ++.++|+||||++++++++|+.||................   ..  +......    ...+.+++.+||+
T Consensus       170 pe~~~~~~~~~~~~D~~slG~~l~~l~~g~~pf~~~~~~~~~~~~~~~~---~~--~~~~~~~----~~~~~~li~~~l~  240 (258)
T cd06632         170 PEVIAQQGGYGLAADIWSLGCTVLEMATGKPPWSQLEGVAAVFKIGRSK---EL--PPIPDHL----SDEAKDFILKCLQ  240 (258)
T ss_pred             HHHhcCCCCCCchhhhHHHHHHHHHHHhCCCCcccCcHHHHHHHHHhcc---cC--CCcCCCc----CHHHHHHHHHHhh
Confidence            99987666 8899999999999999999999986544221111111100   00  0111111    2346678899999


Q ss_pred             CCCCCCCChHHHHH
Q 041793          163 QHPKDRPSMPSVIL  176 (224)
Q Consensus       163 ~dp~~Rps~~~v~~  176 (224)
                      .+|++||++.+++.
T Consensus       241 ~~p~~Rp~~~~~l~  254 (258)
T cd06632         241 RDPSLRPTAAELLE  254 (258)
T ss_pred             cCcccCcCHHHHhc
Confidence            99999999999975


No 293
>cd07855 STKc_ERK5 Catalytic domain of the Serine/Threonine Kinase,  Extracellular signal-Regulated Kinase 5. Serine/Threonine Kinases (STKs), Extracellular signal-Regulated Kinase 5 (ERK5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ERK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. ERK5, also called Big MAPK1 (BMK1) or MAPK7, has a unique C-terminal extension, making it approximately twice as big as other MAPKs. This extension contains transcriptional activation capability which is inhibited by the N-terminal half. ERK5 is activated in response to growth factors and stress by a cascade that leads to its phosphorylation by the 
Probab=99.93  E-value=1.1e-25  Score=184.14  Aligned_cols=172  Identities=22%  Similarity=0.331  Sum_probs=121.2

Q ss_pred             CCCCCChHHHHHHHHHHHHHHhhhhcCCCCceEecCCCCCceEECCCCCceEeeecceeecCCCCCCC--cccccccccc
Q 041793            3 RCKILDWPKRFHIICGTARGVMYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDEIEG--NTNRVIGTYG   80 (224)
Q Consensus         3 ~~~~l~~~~~~~i~~qi~~~l~~Lh~~~~~~i~H~dl~~~nil~~~~~~~kl~df~~~~~~~~~~~~~--~~~~~~~~~~   80 (224)
                      ..+.+++..++.++.||+.||.|||+.+   ++|+||+|+||+++.++.++|+|||++..........  ......++..
T Consensus       100 ~~~~~~~~~~~~i~~qi~~aL~~LH~~~---ivH~dlkp~Nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~  176 (334)
T cd07855         100 SDQPLTEEHIRYFLYQLLRGLKYIHSAN---VIHRDLKPSNLLVNEDCELRIGDFGMARGLSSSPTEHKYFMTEYVATRW  176 (334)
T ss_pred             cCCCCCHHHHHHHHHHHHHHHHHHHHCC---eecCCCCHHHEEEcCCCcEEecccccceeecccCcCCCccccccccccc
Confidence            3466899999999999999999999999   9999999999999999999999999997654322111  1123456788


Q ss_pred             cCCcccccC-CCcccccceEehhHHHHHHHhcccCCCCcCCCccccc-ccccCCC-cccc------------C-ccccCC
Q 041793           81 YMAPEYASD-GKFSVKSDVFSFGILLLEIISGKKNRGFYHSDNKLNL-IGHVSMP-SQLI------------D-PCIQGS  144 (224)
Q Consensus        81 y~aPE~~~~-~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~-~~~~~~~-~~~~------------~-~~~~~~  144 (224)
                      |+|||.+.+ ..++.++|+||||+++|+|++|+.||........... ......+ ....            + ......
T Consensus       177 y~~PE~~~~~~~~~~~~Di~slG~~l~el~~g~~pf~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~  256 (334)
T cd07855         177 YRAPELLLSLPEYTTAIDMWSVGCIFAEMLGRRQLFPGKNYVHQLKLILSVLGSPSEEVLNRIGSDRVRKYIQNLPRKQP  256 (334)
T ss_pred             ccChHHhcCCcccccccchHHHHHHHHHHHcCCCccCCCChHHHHHHHHHHhCCChhHhhhhhchhhHHHHHhhcccCCC
Confidence            999998765 4578999999999999999999999854321110000 0000000 0000            0 000000


Q ss_pred             cCH-----HHHHHHHHHHHHhccCCCCCCCChHHHHHH
Q 041793          145 FNL-----VEVIRCIHIGLLCVQQHPKDRPSMPSVILM  177 (224)
Q Consensus       145 ~~~-----~~~~~~~~li~~cl~~dp~~Rps~~~v~~~  177 (224)
                      ...     .....+.+++++||+.+|++||++.+++..
T Consensus       257 ~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~~l~~  294 (334)
T cd07855         257 VPWSKIFPKASPEALDLLSQMLQFDPEERITVEQALQH  294 (334)
T ss_pred             CCHHHHcccCCHHHHHHHHHHccCChhhCcCHHHHHhC
Confidence            000     012457889999999999999999998874


No 294
>cd06647 STKc_PAK_I Catalytic domain of the Protein Serine/Threonine Kinase, Group I p21-activated kinase. Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, Group I, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAKs from higher eukaryotes are classified into two groups (I and II), according to their bi
Probab=99.93  E-value=1.6e-25  Score=179.97  Aligned_cols=160  Identities=23%  Similarity=0.340  Sum_probs=120.4

Q ss_pred             CCCChHHHHHHHHHHHHHHhhhhcCCCCceEecCCCCCceEECCCCCceEeeecceeecCCCCCCCcccccccccccCCc
Q 041793            5 KILDWPKRFHIICGTARGVMYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDEIEGNTNRVIGTYGYMAP   84 (224)
Q Consensus         5 ~~l~~~~~~~i~~qi~~~l~~Lh~~~~~~i~H~dl~~~nil~~~~~~~kl~df~~~~~~~~~~~~~~~~~~~~~~~y~aP   84 (224)
                      ..+++.++..++.|++.||.|||+.|   ++|+||+|+||+++.++.++|+|||++.........  .....++..|++|
T Consensus       110 ~~l~~~~~~~i~~~l~~al~~LH~~g---i~H~dL~p~Nili~~~~~~kL~dfg~~~~~~~~~~~--~~~~~~~~~y~~P  184 (293)
T cd06647         110 TCMDEGQIAAVCRECLQALEFLHSNQ---VIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQSK--RSTMVGTPYWMAP  184 (293)
T ss_pred             cCCCHHHHHHHHHHHHHHHHHHHhCC---EeeccCCHHHEEEcCCCCEEEccCcceecccccccc--cccccCChhhcCc
Confidence            45789999999999999999999999   999999999999999999999999988755432211  1223567789999


Q ss_pred             ccccCCCcccccceEehhHHHHHHHhcccCCCCcCCCcccccccccCCCccccCccccCCcCHHHHHHHHHHHHHhccCC
Q 041793           85 EYASDGKFSVKSDVFSFGILLLEIISGKKNRGFYHSDNKLNLIGHVSMPSQLIDPCIQGSFNLVEVIRCIHIGLLCVQQH  164 (224)
Q Consensus        85 E~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~d  164 (224)
                      |.+.+..++.++|+||||+++|++++|..||................  ..    ....  .......+.+++.+||+.+
T Consensus       185 E~~~~~~~~~~~Dv~slG~ll~~ll~g~~pf~~~~~~~~~~~~~~~~--~~----~~~~--~~~~~~~l~~li~~~l~~~  256 (293)
T cd06647         185 EVVTRKAYGPKVDIWSLGIMAIEMVEGEPPYLNENPLRALYLIATNG--TP----ELQN--PEKLSAIFRDFLNRCLEMD  256 (293)
T ss_pred             hhhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCChhhheeehhcCC--CC----CCCC--ccccCHHHHHHHHHHccCC
Confidence            99988888999999999999999999999986433222111111000  00    0000  0011234668899999999


Q ss_pred             CCCCCChHHHHHH
Q 041793          165 PKDRPSMPSVILM  177 (224)
Q Consensus       165 p~~Rps~~~v~~~  177 (224)
                      |++||++.+++..
T Consensus       257 p~~Rp~~~~il~h  269 (293)
T cd06647         257 VEKRGSAKELLQH  269 (293)
T ss_pred             hhhCcCHHHHhcC
Confidence            9999999999875


No 295
>cd06621 PKc_MAPKK_Pek1_like Catalytic domain of fungal Pek1-like dual-specificity MAP kinase kinases. Protein kinases (PKs), MAP kinase kinase(MAPKK) subfamily, fungal Pek1-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include 
Probab=99.93  E-value=5.5e-26  Score=181.95  Aligned_cols=165  Identities=25%  Similarity=0.329  Sum_probs=121.1

Q ss_pred             CCCCChHHHHHHHHHHHHHHhhhhcCCCCceEecCCCCCceEECCCCCceEeeecceeecCCCCCCCcccccccccccCC
Q 041793            4 CKILDWPKRFHIICGTARGVMYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDEIEGNTNRVIGTYGYMA   83 (224)
Q Consensus         4 ~~~l~~~~~~~i~~qi~~~l~~Lh~~~~~~i~H~dl~~~nil~~~~~~~kl~df~~~~~~~~~~~~~~~~~~~~~~~y~a   83 (224)
                      ...+++..++.++.||+.||.|||+.+   ++|+||++.||+++.++.++++|||++.......    .....++..|++
T Consensus        99 ~~~l~~~~~~~i~~~i~~~L~~lH~~~---i~H~dl~~~nil~~~~~~~~l~dfg~~~~~~~~~----~~~~~~~~~y~~  171 (287)
T cd06621          99 GGRIGEKVLGKIAESVLKGLSYLHSRK---IIHRDIKPSNILLTRKGQVKLCDFGVSGELVNSL----AGTFTGTSFYMA  171 (287)
T ss_pred             CCCCCHHHHHHHHHHHHHHHHHHHHCC---cccCCCCHHHEEEecCCeEEEeeccccccccccc----cccccCCccccC
Confidence            456888999999999999999999999   9999999999999999999999999986543221    112345678999


Q ss_pred             cccccCCCcccccceEehhHHHHHHHhcccCCCCcCC--CcccccccccCC-CccccCccccCCcCHHHHHHHHHHHHHh
Q 041793           84 PEYASDGKFSVKSDVFSFGILLLEIISGKKNRGFYHS--DNKLNLIGHVSM-PSQLIDPCIQGSFNLVEVIRCIHIGLLC  160 (224)
Q Consensus        84 PE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~--~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~li~~c  160 (224)
                      ||.+.+..++.++|+||||+++|+|++|+.||.....  ............ ..............  ....+.+++.+|
T Consensus       172 pE~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~li~~~  249 (287)
T cd06621         172 PERIQGKPYSITSDVWSLGLTLLEVAQNRFPFPPEGEPPLGPIELLSYIVNMPNPELKDEPGNGIK--WSEEFKDFIKQC  249 (287)
T ss_pred             HHHhcCCCCCchhhHHHHHHHHHHHHhCCCCCCcccCCCCChHHHHHHHhcCCchhhccCCCCCCc--hHHHHHHHHHHH
Confidence            9999888899999999999999999999999865422  111111111111 00111111110011  123567899999


Q ss_pred             ccCCCCCCCChHHHHHH
Q 041793          161 VQQHPKDRPSMPSVILM  177 (224)
Q Consensus       161 l~~dp~~Rps~~~v~~~  177 (224)
                      |+.+|++|||+.||++.
T Consensus       250 l~~~p~~Rpt~~eil~~  266 (287)
T cd06621         250 LEKDPTRRPTPWDMLEH  266 (287)
T ss_pred             cCCCcccCCCHHHHHhC
Confidence            99999999999999773


No 296
>cd06606 STKc_MAPKKK Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-Activated Protein Kinase Kinase Kinase. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKKKs (MKKKs or MAP3Ks) are also called MAP/ERK kinase kinases (MEKKs) in some cases. They phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. This subfamily is composed of the Apoptosis Signal-regulating Kinases ASK1 (or MAPKK
Probab=99.93  E-value=1.1e-25  Score=176.60  Aligned_cols=161  Identities=27%  Similarity=0.414  Sum_probs=123.0

Q ss_pred             CCCChHHHHHHHHHHHHHHhhhhcCCCCceEecCCCCCceEECCCCCceEeeecceeecCCCCCCCcccccccccccCCc
Q 041793            5 KILDWPKRFHIICGTARGVMYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDEIEGNTNRVIGTYGYMAP   84 (224)
Q Consensus         5 ~~l~~~~~~~i~~qi~~~l~~Lh~~~~~~i~H~dl~~~nil~~~~~~~kl~df~~~~~~~~~~~~~~~~~~~~~~~y~aP   84 (224)
                      ..+++.+++.++.|++.||.|||+.+   ++|+||+|+||+++.++.++++|||.+................++..|++|
T Consensus        96 ~~~~~~~~~~~~~~l~~~l~~lh~~~---~~h~dl~p~ni~i~~~~~~~l~d~~~~~~~~~~~~~~~~~~~~~~~~y~~p  172 (260)
T cd06606          96 GKLPEPVIRKYTRQILEGLAYLHSNG---IVHRDIKGANILVDSDGVVKLADFGCAKRLGDIETGEGTGSVRGTPYWMAP  172 (260)
T ss_pred             CCCCHHHHHHHHHHHHHHHHHHHHCC---ccccCCCHHHEEEcCCCCEEEcccccEEecccccccccccCCCCCccccCH
Confidence            37899999999999999999999999   999999999999999999999999999876544321112234567889999


Q ss_pred             ccccCCCcccccceEehhHHHHHHHhcccCCCCcCCCcccccccccCCCccccCccccCCcCHHHHHHHHHHHHHhccCC
Q 041793           85 EYASDGKFSVKSDVFSFGILLLEIISGKKNRGFYHSDNKLNLIGHVSMPSQLIDPCIQGSFNLVEVIRCIHIGLLCVQQH  164 (224)
Q Consensus        85 E~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~d  164 (224)
                      |.+.+...+.++|+|+||++++++++|..||....  +...............  ......    ...+.+++.+||+.|
T Consensus       173 E~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~--~~~~~~~~~~~~~~~~--~~~~~~----~~~l~~~i~~~l~~~  244 (260)
T cd06606         173 EVIRGEEYGRAADIWSLGCTVIEMATGKPPWSELG--NPMAALYKIGSSGEPP--EIPEHL----SEEAKDFLRKCLRRD  244 (260)
T ss_pred             hhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCC--chHHHHHhccccCCCc--CCCccc----CHHHHHHHHHhCcCC
Confidence            99988888999999999999999999999986544  1111111111101110  011111    245778889999999


Q ss_pred             CCCCCChHHHHH
Q 041793          165 PKDRPSMPSVIL  176 (224)
Q Consensus       165 p~~Rps~~~v~~  176 (224)
                      |++||++.++++
T Consensus       245 p~~Rp~~~~ll~  256 (260)
T cd06606         245 PKKRPTADELLQ  256 (260)
T ss_pred             hhhCCCHHHHhh
Confidence            999999999975


No 297
>cd07849 STKc_ERK1_2_like Catalytic domain of Extracellular signal-Regulated Kinase 1 and 2-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Extracellular signal-regulated kinases 1 and 2 (ERK1/2) and Fus3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. This ERK1/2-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the mitogen-activated protein kinases (MAPKs) ERK1, ERK2, baker's yeast Fus3, and similar proteins. MAPK pathways are important mediators of cellular responses to extracellular signals. ERK1/2 activation is preferentially by mitogenic factors, differentiation stimuli, and cytokines, through a kinase cascade involving the MAPK kinases MEK1/2 and a MAPK kinase
Probab=99.93  E-value=8.6e-26  Score=184.81  Aligned_cols=171  Identities=25%  Similarity=0.337  Sum_probs=119.7

Q ss_pred             CCCCChHHHHHHHHHHHHHHhhhhcCCCCceEecCCCCCceEECCCCCceEeeecceeecCCCCCC-CcccccccccccC
Q 041793            4 CKILDWPKRFHIICGTARGVMYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDEIE-GNTNRVIGTYGYM   82 (224)
Q Consensus         4 ~~~l~~~~~~~i~~qi~~~l~~Lh~~~~~~i~H~dl~~~nil~~~~~~~kl~df~~~~~~~~~~~~-~~~~~~~~~~~y~   82 (224)
                      .+.+++..++.++.||+.||.|||+.|   |+|+||+|+||+++.++.++++|||++......... .......++..|+
T Consensus       100 ~~~l~~~~~~~i~~ql~~aL~~LH~~~---ivH~dlkp~Nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~y~  176 (336)
T cd07849         100 TQHLSNDHIQYFLYQILRGLKYIHSAN---VLHRDLKPSNLLLNTNCDLKICDFGLARIADPEHDHTGFLTEYVATRWYR  176 (336)
T ss_pred             cCCCCHHHHHHHHHHHHHHHHHHHhCC---eeccCCCHHHEEECCCCCEEECcccceeeccccccccCCcCCcCcCCCcc
Confidence            356899999999999999999999999   999999999999999999999999998765432211 1112245678899


Q ss_pred             CcccccC-CCcccccceEehhHHHHHHHhcccCCCCcCCCcccccc-cccCCC--------------ccccCccccCCcC
Q 041793           83 APEYASD-GKFSVKSDVFSFGILLLEIISGKKNRGFYHSDNKLNLI-GHVSMP--------------SQLIDPCIQGSFN  146 (224)
Q Consensus        83 aPE~~~~-~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~-~~~~~~--------------~~~~~~~~~~~~~  146 (224)
                      |||.+.+ ..++.++|+||||+++++|++|+.||...........+ .....+              .............
T Consensus       177 aPE~~~~~~~~~~~~DvwslGvil~el~~G~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  256 (336)
T cd07849         177 APEIMLNSKGYTKAIDIWSVGCILAEMLSNRPLFPGKDYLHQLNLILGVLGTPSQEDLNCIISLRARNYIKSLPFKPKVP  256 (336)
T ss_pred             ChHHhhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHcCCCCHHHHHHhhchhhhhHHhhcCcCCccc
Confidence            9998754 45789999999999999999999998543211100000 000000              0000000000000


Q ss_pred             H-----HHHHHHHHHHHHhccCCCCCCCChHHHHHH
Q 041793          147 L-----VEVIRCIHIGLLCVQQHPKDRPSMPSVILM  177 (224)
Q Consensus       147 ~-----~~~~~~~~li~~cl~~dp~~Rps~~~v~~~  177 (224)
                      .     .....+.+++.+||+.||++||++.++++.
T Consensus       257 ~~~~~~~~~~~~~~li~~~l~~dP~~Rpt~~e~l~h  292 (336)
T cd07849         257 WNKLFPNADPKALDLLDKMLTFNPHKRITVEEALAH  292 (336)
T ss_pred             HHHHhcccCcHHHHHHHHHcCCChhhCcCHHHHhcC
Confidence            0     012346789999999999999999999886


No 298
>cd07832 STKc_CCRK Catalytic domain of the Serine/Threonine Kinase, Cell Cycle-Related Kinase. Serine/Threonine Kinases (STKs), Cell Cycle-Related Kinase (CCRK) p42 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CCRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CCRK was previously called p42. It is a Cyclin-Dependent Kinase (CDK)-Activating Kinase (CAK) which is essential for the activation of CDK2. It is indispensable for cell growth and has been implicated in the progression of glioblastoma multiforme. In the heart, a splice variant of CCRK with a different C-terminal half is expressed, this variant promotes cardiac cell growth and survival and is significantly down-regulated during the development of hea
Probab=99.93  E-value=8e-26  Score=180.50  Aligned_cols=169  Identities=23%  Similarity=0.329  Sum_probs=119.2

Q ss_pred             CCCCChHHHHHHHHHHHHHHhhhhcCCCCceEecCCCCCceEECCCCCceEeeecceeecCCCCCCCcccccccccccCC
Q 041793            4 CKILDWPKRFHIICGTARGVMYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDEIEGNTNRVIGTYGYMA   83 (224)
Q Consensus         4 ~~~l~~~~~~~i~~qi~~~l~~Lh~~~~~~i~H~dl~~~nil~~~~~~~kl~df~~~~~~~~~~~~~~~~~~~~~~~y~a   83 (224)
                      .+.+++.+++.++.||+.||.|||+.+   ++|+||+|+||+++.++.++++|||.+........ .......++..|+|
T Consensus        93 ~~~~~~~~~~~~~~~i~~~l~~lH~~~---i~H~dl~p~ni~~~~~~~~~l~dfg~~~~~~~~~~-~~~~~~~~~~~y~a  168 (286)
T cd07832          93 ERPLPEAQVKSYMRMLLKGVAYMHANG---IMHRDLKPANLLISADGVLKIADFGLARLFSEEEP-RLYSHQVATRWYRA  168 (286)
T ss_pred             CCCCCHHHHHHHHHHHHHHHHHHHHCC---eecCCcCHHHEEEcCCCcEEEeeeeecccccCCCC-CccccccCcccccC
Confidence            467899999999999999999999999   99999999999999999999999999886643321 11222456788999


Q ss_pred             cccccCCC-cccccceEehhHHHHHHHhcccCCCCcCCCcccc-cccccCCC--------------ccc-cCcc----cc
Q 041793           84 PEYASDGK-FSVKSDVFSFGILLLEIISGKKNRGFYHSDNKLN-LIGHVSMP--------------SQL-IDPC----IQ  142 (224)
Q Consensus        84 PE~~~~~~-~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~-~~~~~~~~--------------~~~-~~~~----~~  142 (224)
                      ||.+.+.. ++.++|+||+|++++++++|.++|.......... .......+              ... ....    +.
T Consensus       169 PE~~~~~~~~~~~~Di~slG~~l~~l~tg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  248 (286)
T cd07832         169 PELLYGARKYDPGVDLWAVGCIFAELLNGSPLFPGENDIEQLAIVFRTLGTPNEETWPGLTSLPDYNKITFPESKPIPLE  248 (286)
T ss_pred             ceeeeccccCCchhHHHHHHHHHHHHHcCCcCcCCCCHHHHHHHHHHHcCCCChHHHhhccCcchhhcccCCCCCcchHH
Confidence            99886544 5899999999999999999987764332111000 00000000              000 0000    00


Q ss_pred             CCcCHHHHHHHHHHHHHhccCCCCCCCChHHHHHH
Q 041793          143 GSFNLVEVIRCIHIGLLCVQQHPKDRPSMPSVILM  177 (224)
Q Consensus       143 ~~~~~~~~~~~~~li~~cl~~dp~~Rps~~~v~~~  177 (224)
                      ... ......+.+++.+||+.||++||+++++++.
T Consensus       249 ~~~-~~~~~~~~~li~~~l~~~p~~R~~~~~~l~h  282 (286)
T cd07832         249 EIF-PDASPEALDLLKGLLVYDPSKRLSAAEALRH  282 (286)
T ss_pred             HhC-CCccHHHHHHHHHHhccChhhCCCHHHHhhC
Confidence            000 0012467889999999999999999999753


No 299
>PLN00181 protein SPA1-RELATED; Provisional
Probab=99.93  E-value=2.7e-26  Score=206.63  Aligned_cols=158  Identities=20%  Similarity=0.276  Sum_probs=110.8

Q ss_pred             CCCCChHHHHHHHHHHHHHHhhhhcCCCCceEecCCCCCceEECC-------------------CCCceEeeecceeecC
Q 041793            4 CKILDWPKRFHIICGTARGVMYLHQDSRLRIIHRDLKASNVLLDQ-------------------DMNPKISDFGLARAFG   64 (224)
Q Consensus         4 ~~~l~~~~~~~i~~qi~~~l~~Lh~~~~~~i~H~dl~~~nil~~~-------------------~~~~kl~df~~~~~~~   64 (224)
                      .+.+++.+++.++.||+.||+|||++|   |+||||||+|||++.                   ++.+|++|||+++...
T Consensus        74 ~~~~~~~~~~~i~~qi~~al~~lH~~g---IvHrDlKP~NiLl~~~~~~k~~d~~~~~~~~~~~~~~~ki~DfG~a~~~~  150 (793)
T PLN00181         74 DRSVDAFECFHVFRQIVEIVNAAHSQG---IVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDEDATTKSREIGSSRREE  150 (793)
T ss_pred             cccccHHHHHHHHHHHHHHHHHHHhCC---eeeccCCchhEEEcccCcEEEeeccccCcccccccCcccccccccccccc
Confidence            456999999999999999999999999   999999999999954                   3455666666665321


Q ss_pred             CCCC--------------CCcccccccccccCCcccccCCCcccccceEehhHHHHHHHhcccCCCCcCCCccccccccc
Q 041793           65 GDEI--------------EGNTNRVIGTYGYMAPEYASDGKFSVKSDVFSFGILLLEIISGKKNRGFYHSDNKLNLIGHV  130 (224)
Q Consensus        65 ~~~~--------------~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~  130 (224)
                      ....              ........+++.|+|||.+.+..++.++|||||||++|||++|..|+.....  ....... 
T Consensus       151 ~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~sDVwSlGviL~ELl~~~~~~~~~~~--~~~~~~~-  227 (793)
T PLN00181        151 ILSERRIEKLEEVKKQPFPMKQILAMEMSWYTSPEEDNGSSSNCASDVYRLGVLLFELFCPVSSREEKSR--TMSSLRH-  227 (793)
T ss_pred             cccccchhhhhccccCCCcccccccCCCcceEChhhhccCCCCchhhhhhHHHHHHHHhhCCCchhhHHH--HHHHHHH-
Confidence            1000              0001113567889999999999999999999999999999998777532110  0000000 


Q ss_pred             CCCccccCccccCCcCHHHHHHHHHHHHHhccCCCCCCCChHHHHH
Q 041793          131 SMPSQLIDPCIQGSFNLVEVIRCIHIGLLCVQQHPKDRPSMPSVIL  176 (224)
Q Consensus       131 ~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dp~~Rps~~~v~~  176 (224)
                          ...++..     .........++.+||+.||.+||++.+|++
T Consensus       228 ----~~~~~~~-----~~~~~~~~~~~~~~L~~~P~~Rps~~eil~  264 (793)
T PLN00181        228 ----RVLPPQI-----LLNWPKEASFCLWLLHPEPSCRPSMSELLQ  264 (793)
T ss_pred             ----hhcChhh-----hhcCHHHHHHHHHhCCCChhhCcChHHHhh
Confidence                0111100     111223457788999999999999999976


No 300
>cd06630 STKc_MEKK1 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 1. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 1 (MEKK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK1 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK1 activates the extracellular signal-regulated kinase 1/2 (ERK1/2) and c-Jun N-terminal kinase (JNK) pathways by activating their 
Probab=99.93  E-value=9.4e-26  Score=178.48  Aligned_cols=164  Identities=26%  Similarity=0.433  Sum_probs=121.0

Q ss_pred             CCCCChHHHHHHHHHHHHHHhhhhcCCCCceEecCCCCCceEECCCC-CceEeeecceeecCCCCCCC--cccccccccc
Q 041793            4 CKILDWPKRFHIICGTARGVMYLHQDSRLRIIHRDLKASNVLLDQDM-NPKISDFGLARAFGGDEIEG--NTNRVIGTYG   80 (224)
Q Consensus         4 ~~~l~~~~~~~i~~qi~~~l~~Lh~~~~~~i~H~dl~~~nil~~~~~-~~kl~df~~~~~~~~~~~~~--~~~~~~~~~~   80 (224)
                      .+.+++..++.++.||+.||.|||+.|   ++|+||+|.||+++.++ .++|+|||.+..........  ......++..
T Consensus        97 ~~~~~~~~~~~~~~ql~~al~~LH~~~---i~H~~i~~~nil~~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~  173 (268)
T cd06630          97 YGAFKEAVIINYTEQLLRGLSYLHENQ---IIHRDVKGANLLIDSTGQRLRIADFGAAARLAAKGTGAGEFQGQLLGTIA  173 (268)
T ss_pred             hCCCCHHHHHHHHHHHHHHHHHHHhCC---eecCCCCHHHEEEcCCCCEEEEcccccccccccccccCCccccccccccc
Confidence            457899999999999999999999999   99999999999998776 58999999987764332111  1122456788


Q ss_pred             cCCcccccCCCcccccceEehhHHHHHHHhcccCCCCcCCCcccccccccCCCccccCccccCCcCHHHHHHHHHHHHHh
Q 041793           81 YMAPEYASDGKFSVKSDVFSFGILLLEIISGKKNRGFYHSDNKLNLIGHVSMPSQLIDPCIQGSFNLVEVIRCIHIGLLC  160 (224)
Q Consensus        81 y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~c  160 (224)
                      |+|||.+.+..++.++|+|++|++++++++|..||...........+........  .+    .........+.+++.+|
T Consensus       174 ~~~PE~~~~~~~~~~~Dv~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~--~~----~~~~~~~~~~~~~i~~~  247 (268)
T cd06630         174 FMAPEVLRGEQYGRSCDVWSVGCVIIEMATAKPPWNAEKHSNHLALIFKIASATT--AP----SIPEHLSPGLRDVTLRC  247 (268)
T ss_pred             eeCHhHhccCCCCcccchHHHHHHHHHHHhCCCCCCCCCCcchHHHHHHHhccCC--CC----CCchhhCHHHHHHHHHH
Confidence            9999999888889999999999999999999999864332221111111100000  01    11111224567899999


Q ss_pred             ccCCCCCCCChHHHHH
Q 041793          161 VQQHPKDRPSMPSVIL  176 (224)
Q Consensus       161 l~~dp~~Rps~~~v~~  176 (224)
                      |+.+|++||++.++++
T Consensus       248 l~~~p~~R~~~~~ll~  263 (268)
T cd06630         248 LELQPEDRPPSRELLK  263 (268)
T ss_pred             cCCCcccCcCHHHHhc
Confidence            9999999999999974


No 301
>cd07844 STKc_PCTAIRE_like Catalytic domain of PCTAIRE-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), PCTAIRE-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily share sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. The association of PCTAIRE-like proteins with cyclins has not been widely studied, although PFTAIRE-1 has been shown to function as a CDK which is regulated by cyclin D3 as well as the 
Probab=99.93  E-value=7.7e-26  Score=181.25  Aligned_cols=168  Identities=23%  Similarity=0.303  Sum_probs=116.3

Q ss_pred             CCCCChHHHHHHHHHHHHHHhhhhcCCCCceEecCCCCCceEECCCCCceEeeecceeecCCCCCCCcccccccccccCC
Q 041793            4 CKILDWPKRFHIICGTARGVMYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDEIEGNTNRVIGTYGYMA   83 (224)
Q Consensus         4 ~~~l~~~~~~~i~~qi~~~l~~Lh~~~~~~i~H~dl~~~nil~~~~~~~kl~df~~~~~~~~~~~~~~~~~~~~~~~y~a   83 (224)
                      .+.+++..+..++.||+.||.|||+.+   ++|+||+|+||+++.++.++|+|||++.........  .....++..|+|
T Consensus        97 ~~~~~~~~~~~~~~ql~~al~~lH~~~---i~H~dl~p~nil~~~~~~~kl~dfg~~~~~~~~~~~--~~~~~~~~~~~a  171 (291)
T cd07844          97 GGGLSMHNVRLFLFQLLRGLAYCHQRR---VLHRDLKPQNLLISERGELKLADFGLARAKSVPSKT--YSNEVVTLWYRP  171 (291)
T ss_pred             CCCCCHHHHHHHHHHHHHHHHHHHhCC---eecccCCHHHEEEcCCCCEEECccccccccCCCCcc--ccccccccccCC
Confidence            346889999999999999999999999   999999999999999999999999998754321111  111234678999


Q ss_pred             cccccC-CCcccccceEehhHHHHHHHhcccCCCCcCCC-cccc-cccccCCC---------------c---ccc-Cccc
Q 041793           84 PEYASD-GKFSVKSDVFSFGILLLEIISGKKNRGFYHSD-NKLN-LIGHVSMP---------------S---QLI-DPCI  141 (224)
Q Consensus        84 PE~~~~-~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~-~~~~-~~~~~~~~---------------~---~~~-~~~~  141 (224)
                      ||.+.+ ..++.++|+||+|+++|+|++|..||...... .... .......+               .   ... ....
T Consensus       172 PE~~~~~~~~~~~~Dv~slG~il~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  251 (291)
T cd07844         172 PDVLLGSTEYSTSLDMWGVGCIFYEMATGRPLFPGSTDVEDQLHKIFRVLGTPTEETWPGVSSNPEFKPYSFPFYPPRPL  251 (291)
T ss_pred             cHHhhcCcccCcHHHHHHHHHHHHHHHhCCCCCCCCccHHHHHHHHHHhcCCCChhhhhhhhhccccccccccccCChhH
Confidence            998865 45788999999999999999999998543311 0000 00000000               0   000 0000


Q ss_pred             cC-CcCHHHHHHHHHHHHHhccCCCCCCCChHHHHH
Q 041793          142 QG-SFNLVEVIRCIHIGLLCVQQHPKDRPSMPSVIL  176 (224)
Q Consensus       142 ~~-~~~~~~~~~~~~li~~cl~~dp~~Rps~~~v~~  176 (224)
                      .. .........+.+++.+||+.+|++||++.++++
T Consensus       252 ~~~~~~~~~~~~~~~li~~~L~~~p~~Rps~~e~l~  287 (291)
T cd07844         252 INHAPRLDRIPHGEELALKFLQYEPKKRISAAEAMK  287 (291)
T ss_pred             HHhCcCCCCchhHHHHHHHHhccCcccccCHHHHhc
Confidence            00 000111145678999999999999999999864


No 302
>cd07857 STKc_MPK1 Catalytic domain of the Serine/Threonine Kinase, Fungal Mitogen-Activated Protein Kinase MPK1. Serine/Threonine Kinases (STKs), Fungal Mitogen-Activated Protein Kinase (MAPK) MPK1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MPK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the MAPKs MPK1 from Saccharomyces cerevisiae, Pmk1 from Schizosaccharomyces pombe, and similar proteins. MAPKs are important mediators of cellular responses to extracellular signals. MPK1 (also called Slt2) and Pmk1 (also called Spm1) are stress-activated MAPKs that regulate the cell wall integrity (CWI) pathway, and are therefore important in the maintainance of cell shape, cell wall co
Probab=99.93  E-value=9.6e-26  Score=184.24  Aligned_cols=170  Identities=25%  Similarity=0.337  Sum_probs=119.9

Q ss_pred             CCCCCChHHHHHHHHHHHHHHhhhhcCCCCceEecCCCCCceEECCCCCceEeeecceeecCCCCCC--Ccccccccccc
Q 041793            3 RCKILDWPKRFHIICGTARGVMYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDEIE--GNTNRVIGTYG   80 (224)
Q Consensus         3 ~~~~l~~~~~~~i~~qi~~~l~~Lh~~~~~~i~H~dl~~~nil~~~~~~~kl~df~~~~~~~~~~~~--~~~~~~~~~~~   80 (224)
                      ..+.+++..++.++.||+.||.|||+.|   ++|+||+|+||+++.++.++|+|||++.........  .......++..
T Consensus        98 ~~~~~~~~~~~~~~~qi~~aL~~LH~~g---ivH~dlkp~Nili~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~g~~~  174 (332)
T cd07857          98 SGQPLTDAHFQSFIYQILCGLKYIHSAN---VLHRDLKPGNLLVNADCELKICDFGLARGFSENPGENAGFMTEYVATRW  174 (332)
T ss_pred             cCCCCCHHHHHHHHHHHHHHHHHHHhCC---cccCCCCHHHeEEcCCCCEEeCcCCCceecccccccccccccCcccCcc
Confidence            3567899999999999999999999999   999999999999999999999999999865432211  11223467888


Q ss_pred             cCCcccccC-CCcccccceEehhHHHHHHHhcccCCCCcCCCcccc------------cccccCCC---------ccccC
Q 041793           81 YMAPEYASD-GKFSVKSDVFSFGILLLEIISGKKNRGFYHSDNKLN------------LIGHVSMP---------SQLID  138 (224)
Q Consensus        81 y~aPE~~~~-~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~------------~~~~~~~~---------~~~~~  138 (224)
                      |+|||.+.+ ..++.++|+||||++++++++|+.||..........            ........         .....
T Consensus       175 y~aPE~~~~~~~~~~~~Di~slGv~l~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  254 (332)
T cd07857         175 YRAPEIMLSFQSYTKAIDVWSVGCILAELLGRKPVFKGKDYVDQLNQILQVLGTPDEETLSRIGSPKAQNYIRSLPNIPK  254 (332)
T ss_pred             ccCcHHHhCCCCCCcHHHHHHHHHHHHHHHhCCcCCCCCCHHHHHHHHHHHhCCCCHHHHHhhhhhhHHHHHHhccccCC
Confidence            999998765 457899999999999999999999986433111000            00000000         00000


Q ss_pred             ccccCCcCHHHHHHHHHHHHHhccCCCCCCCChHHHHH
Q 041793          139 PCIQGSFNLVEVIRCIHIGLLCVQQHPKDRPSMPSVIL  176 (224)
Q Consensus       139 ~~~~~~~~~~~~~~~~~li~~cl~~dp~~Rps~~~v~~  176 (224)
                      ....... ......+.+++.+||+.||++|||+.++++
T Consensus       255 ~~~~~~~-~~~~~~~~~li~~~l~~~P~~R~t~~~ll~  291 (332)
T cd07857         255 KPFESIF-PNANPLALDLLEKLLAFDPTKRISVEEALE  291 (332)
T ss_pred             cchHhhC-CCCCHHHHHHHHHHccCCcccCCCHHHHhc
Confidence            0000000 000235678999999999999999999864


No 303
>cd06624 STKc_ASK Catalytic domain of the Protein Serine/Threonine Kinase, Apoptosis signal-regulating kinase. Serine/threonine kinases (STKs), Apoptosis signal-regulating kinase (ASK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ASK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Subfamily members are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) and include ASK1, ASK2, and MAPKKK15. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. ASK1 (also called MAPKKK5) functions in the c-Jun N-terminal kina
Probab=99.93  E-value=1.5e-25  Score=177.55  Aligned_cols=156  Identities=29%  Similarity=0.430  Sum_probs=113.9

Q ss_pred             ChHHHHHHHHHHHHHHhhhhcCCCCceEecCCCCCceEECC-CCCceEeeecceeecCCCCCCCcccccccccccCCccc
Q 041793            8 DWPKRFHIICGTARGVMYLHQDSRLRIIHRDLKASNVLLDQ-DMNPKISDFGLARAFGGDEIEGNTNRVIGTYGYMAPEY   86 (224)
Q Consensus         8 ~~~~~~~i~~qi~~~l~~Lh~~~~~~i~H~dl~~~nil~~~-~~~~kl~df~~~~~~~~~~~~~~~~~~~~~~~y~aPE~   86 (224)
                      ++..+..++.||+.||.|||+.+   |+|+||+|+||+++. ++.++|+|||.+........  ......++..|+|||.
T Consensus       106 ~~~~~~~~~~qi~~al~~lH~~~---i~h~dl~p~nil~~~~~~~~~l~dfg~~~~~~~~~~--~~~~~~~~~~~~aPE~  180 (268)
T cd06624         106 NEQTIIFYTKQILEGLKYLHDNQ---IVHRDIKGDNVLVNTYSGVVKISDFGTSKRLAGINP--CTETFTGTLQYMAPEV  180 (268)
T ss_pred             cHHHHHHHHHHHHHHHHHHHHCC---EeecCCCHHHEEEcCCCCeEEEecchhheecccCCC--ccccCCCCccccChhh
Confidence            78888999999999999999999   999999999999976 67899999999876532211  1222356788999999


Q ss_pred             ccCCC--cccccceEehhHHHHHHHhcccCCCCcCCCcccccccccCCCccccCccccCCcCHHHHHHHHHHHHHhccCC
Q 041793           87 ASDGK--FSVKSDVFSFGILLLEIISGKKNRGFYHSDNKLNLIGHVSMPSQLIDPCIQGSFNLVEVIRCIHIGLLCVQQH  164 (224)
Q Consensus        87 ~~~~~--~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~d  164 (224)
                      +.+..  ++.++|+||||++++++++|..||.......... .. .....  ..+..+..    ....+.+++.+||+.+
T Consensus       181 ~~~~~~~~~~~~Dv~slGvvl~~l~~g~~p~~~~~~~~~~~-~~-~~~~~--~~~~~~~~----~~~~~~~li~~~l~~~  252 (268)
T cd06624         181 IDKGPRGYGAPADIWSLGCTIVEMATGKPPFIELGEPQAAM-FK-VGMFK--IHPEIPES----LSAEAKNFILRCFEPD  252 (268)
T ss_pred             hccccccCCchhhhHHHHHHHHHHHhCCCCCccccChhhhH-hh-hhhhc--cCCCCCcc----cCHHHHHHHHHHcCCC
Confidence            86543  6789999999999999999999985432211111 00 00000  00111111    1234678899999999


Q ss_pred             CCCCCChHHHHH
Q 041793          165 PKDRPSMPSVIL  176 (224)
Q Consensus       165 p~~Rps~~~v~~  176 (224)
                      |++|||+.+++.
T Consensus       253 p~~Rpt~~~ll~  264 (268)
T cd06624         253 PDKRASAHDLLQ  264 (268)
T ss_pred             chhCCCHHHHHh
Confidence            999999999975


No 304
>cd06622 PKc_MAPKK_PBS2_like Catalytic domain of fungal PBS2-like dual-specificity MAP kinase kinases. Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, fungal PBS2-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include
Probab=99.93  E-value=1.6e-25  Score=179.04  Aligned_cols=159  Identities=25%  Similarity=0.384  Sum_probs=117.3

Q ss_pred             CCCChHHHHHHHHHHHHHHhhhhc-CCCCceEecCCCCCceEECCCCCceEeeecceeecCCCCCCCcccccccccccCC
Q 041793            5 KILDWPKRFHIICGTARGVMYLHQ-DSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDEIEGNTNRVIGTYGYMA   83 (224)
Q Consensus         5 ~~l~~~~~~~i~~qi~~~l~~Lh~-~~~~~i~H~dl~~~nil~~~~~~~kl~df~~~~~~~~~~~~~~~~~~~~~~~y~a   83 (224)
                      ..+++..+..++.||+.||.|||+ .+   ++|+||+|+||+++.++.++++|||++.......    .....++..|++
T Consensus        97 ~~~~~~~~~~~~~~i~~~l~~LH~~~~---i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~~~----~~~~~~~~~y~a  169 (286)
T cd06622          97 EGIPEDVLRRITYAVVKGLKFLKEEHN---IIHRDVKPTNVLVNGNGQVKLCDFGVSGNLVASL----AKTNIGCQSYMA  169 (286)
T ss_pred             CCCCHHHHHHHHHHHHHHHHHHHhcCC---EeeCCCCHHHEEECCCCCEEEeecCCcccccCCc----cccCCCccCccC
Confidence            478999999999999999999997 47   9999999999999999999999999987653221    122346678999


Q ss_pred             cccccCCC------cccccceEehhHHHHHHHhcccCCCCcCCCcccccccccCCCccccCccccCCcCHHHHHHHHHHH
Q 041793           84 PEYASDGK------FSVKSDVFSFGILLLEIISGKKNRGFYHSDNKLNLIGHVSMPSQLIDPCIQGSFNLVEVIRCIHIG  157 (224)
Q Consensus        84 PE~~~~~~------~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li  157 (224)
                      ||.+.+..      ++.++|+|||||++|++++|+.||..............+..   ...+.....    ....+.+++
T Consensus       170 PE~~~~~~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~---~~~~~~~~~----~~~~~~~li  242 (286)
T cd06622         170 PERIKSGGPNQNPTYTVQSDVWSLGLSILEMALGRYPYPPETYANIFAQLSAIVD---GDPPTLPSG----YSDDAQDFV  242 (286)
T ss_pred             cchhcCCCCCccCCCCcccchHhHHHHHHHHHhCCCCCCCcchhhHHHHHHHHhh---cCCCCCCcc----cCHHHHHHH
Confidence            99885543      47899999999999999999999864332221111111110   000111111    123466888


Q ss_pred             HHhccCCCCCCCChHHHHHH
Q 041793          158 LLCVQQHPKDRPSMPSVILM  177 (224)
Q Consensus       158 ~~cl~~dp~~Rps~~~v~~~  177 (224)
                      .+||+.+|++||++++++..
T Consensus       243 ~~~l~~~p~~Rp~~~~l~~~  262 (286)
T cd06622         243 AKCLNKIPNRRPTYAQLLEH  262 (286)
T ss_pred             HHHcccCcccCCCHHHHhcC
Confidence            99999999999999999863


No 305
>cd06626 STKc_MEKK4 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 4. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 4 (MEKK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK4 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK4 activates the c-Jun N-terminal kinase (JNK) and p38 MAPK signaling pathways by directly activating their respective MAPKKs, MKK4
Probab=99.93  E-value=1.9e-25  Score=176.27  Aligned_cols=163  Identities=28%  Similarity=0.440  Sum_probs=119.5

Q ss_pred             CCCCChHHHHHHHHHHHHHHhhhhcCCCCceEecCCCCCceEECCCCCceEeeecceeecCCCCCCCc--cccccccccc
Q 041793            4 CKILDWPKRFHIICGTARGVMYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDEIEGN--TNRVIGTYGY   81 (224)
Q Consensus         4 ~~~l~~~~~~~i~~qi~~~l~~Lh~~~~~~i~H~dl~~~nil~~~~~~~kl~df~~~~~~~~~~~~~~--~~~~~~~~~y   81 (224)
                      .+.+++..+..++.|++.||.|||+.|   ++|+||+|.||+++.++.++++|||++...........  .....++..|
T Consensus        93 ~~~~~~~~~~~i~~~i~~~l~~lh~~~---i~H~dl~~~nil~~~~~~~kl~d~g~~~~~~~~~~~~~~~~~~~~~~~~~  169 (264)
T cd06626          93 GRILDEHVIRVYTLQLLEGLAYLHSHG---IVHRDIKPANIFLDHNGVIKLGDFGCAVKLKNNTTTMGEEVQSLAGTPAY  169 (264)
T ss_pred             cCCCChHHHHHHHHHHHHHHHHHHHCC---cccCCCCHHHEEECCCCCEEEcccccccccCCCCCcccccccCCcCCcCc
Confidence            345889999999999999999999999   99999999999999999999999999887644322111  1123467789


Q ss_pred             CCcccccCCC---cccccceEehhHHHHHHHhcccCCCCcCCCcccccccccCCCccccCccccCCcCHHHHHHHHHHHH
Q 041793           82 MAPEYASDGK---FSVKSDVFSFGILLLEIISGKKNRGFYHSDNKLNLIGHVSMPSQLIDPCIQGSFNLVEVIRCIHIGL  158 (224)
Q Consensus        82 ~aPE~~~~~~---~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~  158 (224)
                      ++||.+.+..   .+.++|+||||++++++++|+.||........  .........   .+..+...  .....+.+++.
T Consensus       170 ~~PE~~~~~~~~~~~~~~Dv~s~G~il~~l~~g~~pf~~~~~~~~--~~~~~~~~~---~~~~~~~~--~~~~~~~~li~  242 (264)
T cd06626         170 MAPEVITGGKGKGHGRAADIWSLGCVVLEMATGKRPWSELDNEFQ--IMFHVGAGH---KPPIPDSL--QLSPEGKDFLD  242 (264)
T ss_pred             cChhhccCCCCCCCCcccchHHHHHHHHHHHhCCCCccCCcchHH--HHHHHhcCC---CCCCCccc--ccCHHHHHHHH
Confidence            9999987766   78999999999999999999999864431111  111111100   00111111  01234567889


Q ss_pred             HhccCCCCCCCChHHHHH
Q 041793          159 LCVQQHPKDRPSMPSVIL  176 (224)
Q Consensus       159 ~cl~~dp~~Rps~~~v~~  176 (224)
                      +||+.+|++||++++++.
T Consensus       243 ~~l~~~p~~R~~~~~i~~  260 (264)
T cd06626         243 RCLESDPKKRPTASELLQ  260 (264)
T ss_pred             HHccCCcccCCCHHHHhc
Confidence            999999999999999864


No 306
>cd07870 STKc_PFTAIRE2 Catalytic domain of the Serine/Threonine Kinase, PFTAIRE-2 kinase. Serine/Threonine Kinases (STKs), PFTAIRE-2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PFTAIRE-2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PFTAIRE-2 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PFTAIRE-2 is also referred to as ALS2CR7 (amyotrophic lateral sclerosis 2 (juvenile) chromosome region candidate 7). It may be associated with amyotrophic lateral sclerosis 2 (ALS2), an autosomal recess
Probab=99.93  E-value=9.1e-26  Score=180.92  Aligned_cols=166  Identities=23%  Similarity=0.285  Sum_probs=116.3

Q ss_pred             CCCChHHHHHHHHHHHHHHhhhhcCCCCceEecCCCCCceEECCCCCceEeeecceeecCCCCCCCcccccccccccCCc
Q 041793            5 KILDWPKRFHIICGTARGVMYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDEIEGNTNRVIGTYGYMAP   84 (224)
Q Consensus         5 ~~l~~~~~~~i~~qi~~~l~~Lh~~~~~~i~H~dl~~~nil~~~~~~~kl~df~~~~~~~~~~~~~~~~~~~~~~~y~aP   84 (224)
                      ..+++.++..++.||+.||.|||+.+   ++|+||+|+||+++.++.++|+|||++.........  .....++..|+||
T Consensus        98 ~~~~~~~~~~~~~qi~~~L~~lH~~~---i~H~dlkp~Nil~~~~~~~~l~Dfg~~~~~~~~~~~--~~~~~~~~~y~aP  172 (291)
T cd07870          98 GGLHPYNVRLFMFQLLRGLAYIHGQH---ILHRDLKPQNLLISYLGELKLADFGLARAKSIPSQT--YSSEVVTLWYRPP  172 (291)
T ss_pred             CCCCHHHHHHHHHHHHHHHHHHHhCC---cccCCCChHHEEEcCCCcEEEeccccccccCCCCCC--CCCccccccccCC
Confidence            45788899999999999999999999   999999999999999999999999998754322111  1223457789999


Q ss_pred             ccccCC-CcccccceEehhHHHHHHHhcccCCCCcCCCcccccccc---cC---------------CCccccCccccCC-
Q 041793           85 EYASDG-KFSVKSDVFSFGILLLEIISGKKNRGFYHSDNKLNLIGH---VS---------------MPSQLIDPCIQGS-  144 (224)
Q Consensus        85 E~~~~~-~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~---~~---------------~~~~~~~~~~~~~-  144 (224)
                      |.+.+. .++.++|+||||++++++++|..||....... ..+...   ..               ........+.... 
T Consensus       173 E~~~~~~~~~~~~Dv~slG~~l~~l~~g~~~f~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  251 (291)
T cd07870         173 DVLLGATDYSSALDIWGAGCIFIEMLQGQPAFPGVSDVF-EQLEKIWTVLGVPTEDTWPGVSKLPNYKPEWFLPCKPQQL  251 (291)
T ss_pred             ceeecCCCCCcHHHHHHHHHHHHHHHhCCCCCCCchhHH-HHHHHHHHHcCCCChhhhhhhhhcccccchhccccCCcch
Confidence            998754 47889999999999999999999986433210 000000   00               0000000000000 


Q ss_pred             ----cCHHHHHHHHHHHHHhccCCCCCCCChHHHHH
Q 041793          145 ----FNLVEVIRCIHIGLLCVQQHPKDRPSMPSVIL  176 (224)
Q Consensus       145 ----~~~~~~~~~~~li~~cl~~dp~~Rps~~~v~~  176 (224)
                          ........+.+++.+|++.||.+|||+.+++.
T Consensus       252 ~~~~~~~~~~~~~~~ll~~~l~~dp~~R~t~~~~l~  287 (291)
T cd07870         252 RVVWKRLSRPPKAEDLASQMLMMFPKDRISAQDALL  287 (291)
T ss_pred             hhhccccCCChHHHHHHHHHhCcCcccCcCHHHHhc
Confidence                00001234568889999999999999999864


No 307
>cd07840 STKc_CDK9_like Catalytic domain of Cyclin-Dependent protein Kinase 9-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 9 (CDK9)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK9-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK9 and CDK12 from higher eukaryotes, yeast BUR1, C-type plant CDKs (CdkC), and similar proteins. CDK9, BUR1, and CdkC are functionally equivalent. They act as a kinase for the C-terminal domain of RNA po
Probab=99.93  E-value=4.3e-26  Score=181.95  Aligned_cols=168  Identities=23%  Similarity=0.297  Sum_probs=119.6

Q ss_pred             CCCChHHHHHHHHHHHHHHhhhhcCCCCceEecCCCCCceEECCCCCceEeeecceeecCCCCCCCcccccccccccCCc
Q 041793            5 KILDWPKRFHIICGTARGVMYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDEIEGNTNRVIGTYGYMAP   84 (224)
Q Consensus         5 ~~l~~~~~~~i~~qi~~~l~~Lh~~~~~~i~H~dl~~~nil~~~~~~~kl~df~~~~~~~~~~~~~~~~~~~~~~~y~aP   84 (224)
                      ..+++.+++.++.||+.||+|||+.|   ++|+||+|+||+++.++.++++|||++......... ......++..|+||
T Consensus        95 ~~~~~~~~~~i~~~i~~al~~LH~~~---~~h~dl~p~nil~~~~~~~~l~d~g~~~~~~~~~~~-~~~~~~~~~~y~~P  170 (287)
T cd07840          95 VKFTESQIKCYMKQLLEGLQYLHSNG---ILHRDIKGSNILINNDGVLKLADFGLARPYTKRNSA-DYTNRVITLWYRPP  170 (287)
T ss_pred             CCCCHHHHHHHHHHHHHHHHHHHHCC---ceeccCcHHHeEEcCCCCEEEccccceeeccCCCcc-cccccccccccCCc
Confidence            57899999999999999999999999   999999999999999999999999999876543211 11223456789999


Q ss_pred             ccccC-CCcccccceEehhHHHHHHHhcccCCCCcCCCcccccccc-cCCC-------------------ccccCccccC
Q 041793           85 EYASD-GKFSVKSDVFSFGILLLEIISGKKNRGFYHSDNKLNLIGH-VSMP-------------------SQLIDPCIQG  143 (224)
Q Consensus        85 E~~~~-~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~-~~~~-------------------~~~~~~~~~~  143 (224)
                      |.+.+ ..++.++|+||||++++++++|+.||...........+.. ...+                   ..........
T Consensus       171 E~~~~~~~~~~~~Dv~slG~~l~el~t~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  250 (287)
T cd07840         171 ELLLGATRYGPEVDMWSVGCILAELFLGKPIFQGSTELEQLEKIFELCGSPTDENWPGVSKLPWFENLKPKKPYKRRLRE  250 (287)
T ss_pred             eeeEccccCChHHHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCchhhccccccchhhhhccccccchhHHHH
Confidence            98765 3578999999999999999999999864332211110000 0000                   0000000000


Q ss_pred             CcCHHHHHHHHHHHHHhccCCCCCCCChHHHHH
Q 041793          144 SFNLVEVIRCIHIGLLCVQQHPKDRPSMPSVIL  176 (224)
Q Consensus       144 ~~~~~~~~~~~~li~~cl~~dp~~Rps~~~v~~  176 (224)
                      .........+.+++.+||+.+|++||+++++++
T Consensus       251 ~~~~~~~~~~~~~i~~~l~~~P~~Rp~~~~~l~  283 (287)
T cd07840         251 FFKHLIDPSALDLLDKLLTLDPKKRISADQALQ  283 (287)
T ss_pred             HhcccCCHHHHHHHHHHcCCChhhCcCHHHHhh
Confidence            000001345788999999999999999999975


No 308
>cd06634 STKc_TAO2 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 2. Serine/threonine kinases (STKs), thousand-and-one amino acids 2 (TAO2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Human TAO2 is also known as prostate-derived Ste20-like kinase (PSK) and was identified in a screen for overexpressed RNAs in prostate cancer. TAO2 activates both p38 and c-Jun N-terminal kinase (JNK), by phosphorylating and activatin
Probab=99.93  E-value=1.1e-25  Score=182.14  Aligned_cols=157  Identities=29%  Similarity=0.375  Sum_probs=118.4

Q ss_pred             CCCCChHHHHHHHHHHHHHHhhhhcCCCCceEecCCCCCceEECCCCCceEeeecceeecCCCCCCCcccccccccccCC
Q 041793            4 CKILDWPKRFHIICGTARGVMYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDEIEGNTNRVIGTYGYMA   83 (224)
Q Consensus         4 ~~~l~~~~~~~i~~qi~~~l~~Lh~~~~~~i~H~dl~~~nil~~~~~~~kl~df~~~~~~~~~~~~~~~~~~~~~~~y~a   83 (224)
                      .+.+++.+++.++.|++.||.|||+.+   ++|+||+|+||+++.++.++++|||++......      ....++..|+|
T Consensus       109 ~~~l~~~~~~~~~~~l~~~l~~LH~~~---i~H~dl~p~nil~~~~~~~kl~dfg~~~~~~~~------~~~~~~~~y~a  179 (308)
T cd06634         109 KKPLQEVEIAAVTHGALQGLAYLHSHN---MIHRDVKAGNILLSEPGLVKLGDFGSASIMAPA------NXFVGTPYWMA  179 (308)
T ss_pred             CCCCCHHHHHHHHHHHHHHHHHHHhCC---cccCCCCHHhEEECCCCcEEECCcccceeecCc------ccccCCccccC
Confidence            456899999999999999999999999   999999999999999999999999998764321      22356778999


Q ss_pred             ccccc---CCCcccccceEehhHHHHHHHhcccCCCCcCCCcccccccccCCCccccCccccCCcCHHHHHHHHHHHHHh
Q 041793           84 PEYAS---DGKFSVKSDVFSFGILLLEIISGKKNRGFYHSDNKLNLIGHVSMPSQLIDPCIQGSFNLVEVIRCIHIGLLC  160 (224)
Q Consensus        84 PE~~~---~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~c  160 (224)
                      ||.+.   ...++.++|+||||++++++++|..||.................    +. .....    ....+.++|.+|
T Consensus       180 PE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~~~~~~~~~~----~~-~~~~~----~~~~~~~li~~c  250 (308)
T cd06634         180 PEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMSALYHIAQNES----PA-LQSGH----WSEYFRNFVDSC  250 (308)
T ss_pred             HHHHhhcccCCCCcccchHHHHHHHHHHHcCCCCCccccHHHHHHHHhhcCC----CC-cCccc----ccHHHHHHHHHH
Confidence            99874   34578899999999999999999999754332211111111110    00 00111    123466888999


Q ss_pred             ccCCCCCCCChHHHHHHh
Q 041793          161 VQQHPKDRPSMPSVILML  178 (224)
Q Consensus       161 l~~dp~~Rps~~~v~~~L  178 (224)
                      |+.+|++||++.++++..
T Consensus       251 l~~~P~~Rp~~~~ll~~~  268 (308)
T cd06634         251 LQKIPQDRPTSEVLLKHR  268 (308)
T ss_pred             hhCCcccCCCHHHHhhCc
Confidence            999999999999998764


No 309
>cd08220 STKc_Nek8 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 8. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 8 (Nek8) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek8 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek8 contains an N-terminal kinase catalytic domain and a C-terminal RCC1 (regulator of chromosome condensation) domain. A double point mutation in Nek8 causes cystic kidney disease in mice that genetically resembles human autosomal recessive polycystic kidney disease (ARPKD). Nek8 is also associated with 
Probab=99.93  E-value=1.3e-25  Score=176.39  Aligned_cols=157  Identities=25%  Similarity=0.393  Sum_probs=118.4

Q ss_pred             CCCCChHHHHHHHHHHHHHHhhhhcCCCCceEecCCCCCceEECCC-CCceEeeecceeecCCCCCCCcccccccccccC
Q 041793            4 CKILDWPKRFHIICGTARGVMYLHQDSRLRIIHRDLKASNVLLDQD-MNPKISDFGLARAFGGDEIEGNTNRVIGTYGYM   82 (224)
Q Consensus         4 ~~~l~~~~~~~i~~qi~~~l~~Lh~~~~~~i~H~dl~~~nil~~~~-~~~kl~df~~~~~~~~~~~~~~~~~~~~~~~y~   82 (224)
                      ...+++..++.++.|++.||+|||++|   ++|+||+|.||+++.+ +.++++|||.+.......   ......++..|+
T Consensus        95 ~~~~~~~~~~~~~~~i~~~l~~lh~~~---i~h~dl~~~nil~~~~~~~~~l~d~~~~~~~~~~~---~~~~~~~~~~y~  168 (256)
T cd08220          95 NSLLDEDTILHFFVQILLALHHVHTKL---ILHRDLKTQNILLDKHKMVVKIGDFGISKILSSKS---KAYTVVGTPCYI  168 (256)
T ss_pred             ccCCCHHHHHHHHHHHHHHHHHHHhCC---eecCCCCHHHEEEcCCCCEEEEccCCCceecCCCc---cccccccCCccc
Confidence            345899999999999999999999999   9999999999999855 457999999998764322   112245677899


Q ss_pred             CcccccCCCcccccceEehhHHHHHHHhcccCCCCcCCCcccccccccCCCccccCccccCCcCHHHHHHHHHHHHHhcc
Q 041793           83 APEYASDGKFSVKSDVFSFGILLLEIISGKKNRGFYHSDNKLNLIGHVSMPSQLIDPCIQGSFNLVEVIRCIHIGLLCVQ  162 (224)
Q Consensus        83 aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~  162 (224)
                      |||.+.+..++.++|+||||++++++++|+.||................ .....     ...    ...+.+++.+||+
T Consensus       169 aPE~~~~~~~~~~~Dv~slG~~l~~l~~~~~~~~~~~~~~~~~~~~~~~-~~~~~-----~~~----~~~l~~li~~~l~  238 (256)
T cd08220         169 SPELCEGKPYNQKSDIWALGCVLYELASLKRAFEAANLPALVLKIMSGT-FAPIS-----DRY----SPDLRQLILSMLN  238 (256)
T ss_pred             CchhccCCCCCcccchHHHHHHHHHHHhCCCCcccCchHHHHHHHHhcC-CCCCC-----CCc----CHHHHHHHHHHcc
Confidence            9999988888999999999999999999999976543221111110000 00111     111    1246688899999


Q ss_pred             CCCCCCCChHHHHH
Q 041793          163 QHPKDRPSMPSVIL  176 (224)
Q Consensus       163 ~dp~~Rps~~~v~~  176 (224)
                      .+|++|||+.++++
T Consensus       239 ~~p~~Rpt~~~ll~  252 (256)
T cd08220         239 LDPSKRPQLSQIMA  252 (256)
T ss_pred             CChhhCCCHHHHhh
Confidence            99999999999975


No 310
>cd06623 PKc_MAPKK_plant_like Catalytic domain of Plant dual-specificity MAP kinase kinases and similar proteins. Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, Plant MAPKKs and similar proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of
Probab=99.93  E-value=1.1e-25  Score=177.56  Aligned_cols=162  Identities=28%  Similarity=0.399  Sum_probs=123.2

Q ss_pred             CCCChHHHHHHHHHHHHHHhhhhc-CCCCceEecCCCCCceEECCCCCceEeeecceeecCCCCCCCcccccccccccCC
Q 041793            5 KILDWPKRFHIICGTARGVMYLHQ-DSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDEIEGNTNRVIGTYGYMA   83 (224)
Q Consensus         5 ~~l~~~~~~~i~~qi~~~l~~Lh~-~~~~~i~H~dl~~~nil~~~~~~~kl~df~~~~~~~~~~~~~~~~~~~~~~~y~a   83 (224)
                      ..+++..++.++.||+.||.|||+ .+   ++|+||+|+||+++.++.++|+|||.+.........  .....++..|+|
T Consensus        94 ~~l~~~~~~~~~~~l~~~l~~lh~~~~---~~H~~l~~~ni~~~~~~~~~l~df~~~~~~~~~~~~--~~~~~~~~~y~~  168 (264)
T cd06623          94 GKIPEPVLAYIARQILKGLDYLHTKRH---IIHRDIKPSNLLINSKGEVKIADFGISKVLENTLDQ--CNTFVGTVTYMS  168 (264)
T ss_pred             CCCCHHHHHHHHHHHHHHHHHHhccCC---CccCCCCHHHEEECCCCCEEEccCccceecccCCCc--ccceeecccccC
Confidence            678999999999999999999999 99   999999999999999999999999998876433221  123456778999


Q ss_pred             cccccCCCcccccceEehhHHHHHHHhcccCCCCcCCCcccccccccCCCccccCccccCCcCHHHHHHHHHHHHHhccC
Q 041793           84 PEYASDGKFSVKSDVFSFGILLLEIISGKKNRGFYHSDNKLNLIGHVSMPSQLIDPCIQGSFNLVEVIRCIHIGLLCVQQ  163 (224)
Q Consensus        84 PE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~  163 (224)
                      ||.+.+..++.++|+|+||+++|++++|..||...................   .......   .....+.+++.+||..
T Consensus       169 pE~~~~~~~~~~~Dv~slG~il~~l~tg~~p~~~~~~~~~~~~~~~~~~~~---~~~~~~~---~~~~~l~~li~~~l~~  242 (264)
T cd06623         169 PERIQGESYSYAADIWSLGLTLLECALGKFPFLPPGQPSFFELMQAICDGP---PPSLPAE---EFSPEFRDFISACLQK  242 (264)
T ss_pred             HhhhCCCCCCchhhHHHHHHHHHHHHhCCCCCccccccCHHHHHHHHhcCC---CCCCCcc---cCCHHHHHHHHHHccC
Confidence            999988888999999999999999999999986543212222221111100   0111111   0123577889999999


Q ss_pred             CCCCCCChHHHHHH
Q 041793          164 HPKDRPSMPSVILM  177 (224)
Q Consensus       164 dp~~Rps~~~v~~~  177 (224)
                      +|++||++.++++.
T Consensus       243 ~p~~R~~~~~ll~~  256 (264)
T cd06623         243 DPKKRPSAAELLQH  256 (264)
T ss_pred             ChhhCCCHHHHHhC
Confidence            99999999999874


No 311
>cd05623 STKc_MRCK_alpha Catalytic domain of the Protein Serine/Threonine Kinase, DMPK-related cell division control protein 42 binding kinase alpha. Serine/Threonine Kinases (STKs), DMPK-like subfamily, DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK) alpha isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MRCK is activated via interaction with the small GTPase Cdc42. MRCK/Cdc42 signaling mediates myosin-dependent cell motility. MRCKalpha is expressed ubiquitously in many tissues. It plays a role in the regulation of peripheral actin reorganization and neurite outgrowth. It may also play a role in the transferrin iron uptake pathw
Probab=99.93  E-value=1.7e-25  Score=182.85  Aligned_cols=164  Identities=17%  Similarity=0.192  Sum_probs=116.1

Q ss_pred             CCCCChHHHHHHHHHHHHHHhhhhcCCCCceEecCCCCCceEECCCCCceEeeecceeecCCCCCCCcccccccccccCC
Q 041793            4 CKILDWPKRFHIICGTARGVMYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDEIEGNTNRVIGTYGYMA   83 (224)
Q Consensus         4 ~~~l~~~~~~~i~~qi~~~l~~Lh~~~~~~i~H~dl~~~nil~~~~~~~kl~df~~~~~~~~~~~~~~~~~~~~~~~y~a   83 (224)
                      .+.+++..+..++.||+.||.|||+.+   |+||||||+||+++.++.++|+|||++........ .......|+..|+|
T Consensus        96 ~~~l~~~~~~~~~~qi~~al~~lH~~~---iiHrDlkp~Nili~~~~~~kL~DfG~a~~~~~~~~-~~~~~~~gt~~y~a  171 (332)
T cd05623          96 EDRLPEDMARFYLAEMVIAIDSVHQLH---YVHRDIKPDNILMDMNGHIRLADFGSCLKLMEDGT-VQSSVAVGTPDYIS  171 (332)
T ss_pred             cCCCCHHHHHHHHHHHHHHHHHHHHCC---eEecCCCHHHEEECCCCCEEEeecchheecccCCc-ceecccccCccccC
Confidence            457899999999999999999999999   99999999999999999999999999876432211 11223467899999


Q ss_pred             ccccc-----CCCcccccceEehhHHHHHHHhcccCCCCcCCCcccccccccCCCccccCccccCCcCHHHHHHHHHHHH
Q 041793           84 PEYAS-----DGKFSVKSDVFSFGILLLEIISGKKNRGFYHSDNKLNLIGHVSMPSQLIDPCIQGSFNLVEVIRCIHIGL  158 (224)
Q Consensus        84 PE~~~-----~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~  158 (224)
                      ||++.     ...++.++|+|||||++|+|++|+.||...........+.........+. . ....+    ..+.+|+.
T Consensus       172 PE~~~~~~~~~~~~~~~~DvwSlGvil~ell~g~~Pf~~~~~~~~~~~i~~~~~~~~~p~-~-~~~~s----~~~~~li~  245 (332)
T cd05623         172 PEILQAMEDGKGKYGPECDWWSLGVCMYEMLYGETPFYAESLVETYGKIMNHKERFQFPA-Q-VTDVS----EDAKDLIR  245 (332)
T ss_pred             HHHHhccccCCCCCCCcCCEEeeHHHHHHHhcCCCCCCCCCHHHHHHHHhCCCccccCCC-c-cccCC----HHHHHHHH
Confidence            99986     24578899999999999999999999864332211111111000000110 0 00111    23567788


Q ss_pred             HhccCCCCC--CCChHHHHHH
Q 041793          159 LCVQQHPKD--RPSMPSVILM  177 (224)
Q Consensus       159 ~cl~~dp~~--Rps~~~v~~~  177 (224)
                      +|+..++++  |++++++++.
T Consensus       246 ~ll~~~~~r~~r~~~~~~~~h  266 (332)
T cd05623         246 RLICSREHRLGQNGIEDFKQH  266 (332)
T ss_pred             HHccChhhhcCCCCHHHHhCC
Confidence            888765554  6889988765


No 312
>cd07845 STKc_CDK10 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 10. Serine/Threonine Kinases (STKs), Cyclin-dependent protein Kinase 10 (CDK10) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK10 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK10, also called PISSLRE, is essential for cell growth and proliferation, and acts through the G2/M phase of the cell cycle. CDK10 has also been identified as an important factor in endocrine therapy resistance in breast cancer. CDK10 silencing
Probab=99.93  E-value=5.4e-26  Score=183.85  Aligned_cols=169  Identities=27%  Similarity=0.306  Sum_probs=119.1

Q ss_pred             CCCCChHHHHHHHHHHHHHHhhhhcCCCCceEecCCCCCceEECCCCCceEeeecceeecCCCCCCCcccccccccccCC
Q 041793            4 CKILDWPKRFHIICGTARGVMYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDEIEGNTNRVIGTYGYMA   83 (224)
Q Consensus         4 ~~~l~~~~~~~i~~qi~~~l~~Lh~~~~~~i~H~dl~~~nil~~~~~~~kl~df~~~~~~~~~~~~~~~~~~~~~~~y~a   83 (224)
                      .+.+++.+++.++.||+.||.|||+.|   ++|+||+|+||+++.++.++|+|||++.........  ......+..|+|
T Consensus       102 ~~~l~~~~~~~~~~qi~~~l~~lH~~~---i~H~dl~p~nil~~~~~~~kL~dfg~~~~~~~~~~~--~~~~~~~~~y~a  176 (309)
T cd07845         102 PTPFSESQVKCLMLQLLRGLQYLHENF---IIHRDLKVSNLLLTDKGCLKIADFGLARTYGLPAKP--MTPKVVTLWYRA  176 (309)
T ss_pred             ccCCCHHHHHHHHHHHHHHHHHHHhCC---eecCCCCHHHEEECCCCCEEECccceeeecCCccCC--CCcccccccccC
Confidence            356899999999999999999999999   999999999999999999999999999876432211  111234667999


Q ss_pred             cccccC-CCcccccceEehhHHHHHHHhcccCCCCcCCCcccccccc-cCCCc-------------cccCccccCCcCHH
Q 041793           84 PEYASD-GKFSVKSDVFSFGILLLEIISGKKNRGFYHSDNKLNLIGH-VSMPS-------------QLIDPCIQGSFNLV  148 (224)
Q Consensus        84 PE~~~~-~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~-~~~~~-------------~~~~~~~~~~~~~~  148 (224)
                      ||.+.+ ..++.++|+||||+++|+|++|..||...........+.. ...+.             ..............
T Consensus       177 PE~~~~~~~~~~~~DvwslG~il~el~~g~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  256 (309)
T cd07845         177 PELLLGCTTYTTAIDMWAVGCILAELLAHKPLLPGKSEIEQLDLIIQLLGTPNESIWPGFSDLPLVGKFTLPKQPYNNLK  256 (309)
T ss_pred             hhhhcCCCCcCchHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCCCChhhchhhhcccccccccccCCCCCchH
Confidence            998865 4578999999999999999999999864332221111100 00000             00000000000000


Q ss_pred             -----HHHHHHHHHHHhccCCCCCCCChHHHHHH
Q 041793          149 -----EVIRCIHIGLLCVQQHPKDRPSMPSVILM  177 (224)
Q Consensus       149 -----~~~~~~~li~~cl~~dp~~Rps~~~v~~~  177 (224)
                           ....+.++|.+||+.||++|||+++++..
T Consensus       257 ~~~~~~~~~~~~li~~ml~~dp~~R~t~~~il~h  290 (309)
T cd07845         257 HKFPWLSEAGLRLLNFLLMYDPKKRATAEEALES  290 (309)
T ss_pred             HhccccCHHHHHHHHHHhcCChhhCcCHHHHhcC
Confidence                 12345689999999999999999999864


No 313
>cd05579 STKc_MAST_like Catalytic domain of Microtubule-associated serine/threonine kinase-like proteins. Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The MAST kinase subfamily includes MAST kinases, MAST-like (MASTL) kinases, and fungal kinases with similarity to Saccharomyces cerevisiae Rim15 and Schizosaccharomyces pombe cek1. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. MASTL kinases carry only a catalytic domain which contains a long insert re
Probab=99.93  E-value=6.8e-26  Score=178.57  Aligned_cols=164  Identities=24%  Similarity=0.264  Sum_probs=121.8

Q ss_pred             CCCChHHHHHHHHHHHHHHhhhhcCCCCceEecCCCCCceEECCCCCceEeeecceeecCCCCCC------Ccccccccc
Q 041793            5 KILDWPKRFHIICGTARGVMYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDEIE------GNTNRVIGT   78 (224)
Q Consensus         5 ~~l~~~~~~~i~~qi~~~l~~Lh~~~~~~i~H~dl~~~nil~~~~~~~kl~df~~~~~~~~~~~~------~~~~~~~~~   78 (224)
                      +.+++..++.++.||+.||.|||+.+   ++|+||+|+||+++.++.++++|||++.........      .......++
T Consensus        88 ~~~~~~~~~~i~~qi~~~L~~lH~~~---i~H~di~~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~  164 (265)
T cd05579          88 GSLDEDVARIYIAEIVLALEYLHSNG---IIHRDLKPDNILIDSNGHLKLTDFGLSKVGLVRRQINLNDDEKEDKRIVGT  164 (265)
T ss_pred             CCCCHHHHHHHHHHHHHHHHHHHHcC---eecCCCCHHHeEEcCCCCEEEEecccchhcccCcccccccccccccCcccC
Confidence            47899999999999999999999999   999999999999999999999999998754322110      012223567


Q ss_pred             cccCCcccccCCCcccccceEehhHHHHHHHhcccCCCCcCCCcccccccccCCCccccCccccCCcCHHHHHHHHHHHH
Q 041793           79 YGYMAPEYASDGKFSVKSDVFSFGILLLEIISGKKNRGFYHSDNKLNLIGHVSMPSQLIDPCIQGSFNLVEVIRCIHIGL  158 (224)
Q Consensus        79 ~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~  158 (224)
                      ..|++||...+...+.++|+||||++++++++|..||..............   ......    ....  ....+.+++.
T Consensus       165 ~~~~~Pe~~~~~~~~~~~Dv~slG~~~~~l~~g~~p~~~~~~~~~~~~~~~---~~~~~~----~~~~--~~~~~~~~i~  235 (265)
T cd05579         165 PDYIAPEVILGQGHSKTVDWWSLGCILYEFLVGIPPFHGETPEEIFQNILN---GKIEWP----EDVE--VSDEAIDLIS  235 (265)
T ss_pred             ccccCHHHhcCCCCCcchhhHHHHHHHHHHHhCCCCCCCCCHHHHHHHHhc---CCcCCC----cccc--CCHHHHHHHH
Confidence            789999999888889999999999999999999999864432221111111   000000    0000  1234678999


Q ss_pred             HhccCCCCCCCChHHHHHHhcc
Q 041793          159 LCVQQHPKDRPSMPSVILMLGS  180 (224)
Q Consensus       159 ~cl~~dp~~Rps~~~v~~~L~~  180 (224)
                      +||+.+|++||++..+.+.|+.
T Consensus       236 ~~l~~~p~~Rpt~~~~~~~l~~  257 (265)
T cd05579         236 KLLVPDPEKRLGAKSIEEIKNH  257 (265)
T ss_pred             HHhcCCHhhcCCCccHHHHhcC
Confidence            9999999999999777766653


No 314
>cd05597 STKc_DMPK_like Catalytic domain of Myotonic Dystrophy protein kinase-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Myotonic Dystrophy protein kinase (DMPK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The DMPK-like subfamily is composed of DMPK and DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK). Three isoforms of MRCK are known, named alpha, beta and gamma. The DMPK gene is implicated in myotonic dystrophy 1 (DM1), an inherited multisystemic disorder with symptoms that include muscle hyperexcitability, progressive muscle weakness and wasting, cataract development, testicular atrophy,
Probab=99.93  E-value=6.2e-25  Score=179.45  Aligned_cols=164  Identities=19%  Similarity=0.215  Sum_probs=115.0

Q ss_pred             CCCCChHHHHHHHHHHHHHHhhhhcCCCCceEecCCCCCceEECCCCCceEeeecceeecCCCCCCCcccccccccccCC
Q 041793            4 CKILDWPKRFHIICGTARGVMYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDEIEGNTNRVIGTYGYMA   83 (224)
Q Consensus         4 ~~~l~~~~~~~i~~qi~~~l~~Lh~~~~~~i~H~dl~~~nil~~~~~~~kl~df~~~~~~~~~~~~~~~~~~~~~~~y~a   83 (224)
                      ...+++.++..++.||+.||+|||+.+   |+||||||+||+++.++.++|+|||++......... ......++..|+|
T Consensus        96 ~~~~~~~~~~~~~~qi~~~l~~lH~~~---ivH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~~~~-~~~~~~gt~~y~a  171 (331)
T cd05597          96 EDRLPEDMARFYLAEMVLAIDSVHQLG---YVHRDIKPDNVLLDKNGHIRLADFGSCLRLLADGTV-QSNVAVGTPDYIS  171 (331)
T ss_pred             cCCCCHHHHHHHHHHHHHHHHHHHhCC---eEECCCCHHHEEECCCCCEEEEECCceeecCCCCCc-cccceeccccccC
Confidence            457899999999999999999999999   999999999999999999999999998765432211 1122457889999


Q ss_pred             cccccC-----CCcccccceEehhHHHHHHHhcccCCCCcCCCcccccccccCCCccccCccccCCcCHHHHHHHHHHHH
Q 041793           84 PEYASD-----GKFSVKSDVFSFGILLLEIISGKKNRGFYHSDNKLNLIGHVSMPSQLIDPCIQGSFNLVEVIRCIHIGL  158 (224)
Q Consensus        84 PE~~~~-----~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~  158 (224)
                      ||.+..     ..++.++|+|||||++|+|++|+.||...........+........... .. ...+    ..+.+++.
T Consensus       172 PE~~~~~~~~~~~~~~~~DiwslG~~l~el~~g~~Pf~~~~~~~~~~~i~~~~~~~~~~~-~~-~~~~----~~~~~li~  245 (331)
T cd05597         172 PEILQAMEDGKGRYGPECDWWSLGVCMYEMLYGETPFYAESLVETYGKIMNHKEHFQFPP-DV-TDVS----EEAKDLIR  245 (331)
T ss_pred             HHHHhhccccccCCCCcceeehhhhHHHHHhhCCCCCCCCCHHHHHHHHHcCCCcccCCC-cc-CCCC----HHHHHHHH
Confidence            999863     3467899999999999999999999864322211111110000011111 00 0111    23556777


Q ss_pred             HhccCCCCC--CCChHHHHHH
Q 041793          159 LCVQQHPKD--RPSMPSVILM  177 (224)
Q Consensus       159 ~cl~~dp~~--Rps~~~v~~~  177 (224)
                      +|+..++++  |++++++++.
T Consensus       246 ~ll~~~~~r~~r~~~~~~l~h  266 (331)
T cd05597         246 RLICSPETRLGRNGLQDFKDH  266 (331)
T ss_pred             HHccCcccccCCCCHHHHhcC
Confidence            877654443  7899888875


No 315
>cd08226 PK_STRAD_beta Pseudokinase domain of STE20-related kinase adapter protein beta. Protein Kinase family, STE20-related kinase adapter protein (STRAD) beta subfamily, pseudokinase domain. The STRAD-beta subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hyperpig
Probab=99.93  E-value=1.4e-25  Score=182.90  Aligned_cols=170  Identities=23%  Similarity=0.317  Sum_probs=116.7

Q ss_pred             CCCChHHHHHHHHHHHHHHhhhhcCCCCceEecCCCCCceEECCCCCceEeeecceeecCCCCCCC-----ccccccccc
Q 041793            5 KILDWPKRFHIICGTARGVMYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDEIEG-----NTNRVIGTY   79 (224)
Q Consensus         5 ~~l~~~~~~~i~~qi~~~l~~Lh~~~~~~i~H~dl~~~nil~~~~~~~kl~df~~~~~~~~~~~~~-----~~~~~~~~~   79 (224)
                      ..+++..+..++.||+.||+|||+.|   ++|+||||+||+++.++.+++.||+............     ......++.
T Consensus        96 ~~~~~~~~~~~~~qi~~aL~~lH~~~---ivHrDlkp~Nill~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  172 (328)
T cd08226          96 EGMSEALIGNILFGALRGLNYLHQNG---YIHRNIKASHILISGDGLVSLSGLSHLYSLVRNGQKAKVVYDFPQFSTSVL  172 (328)
T ss_pred             cCCCHHHHHHHHHHHHHHHHHHHhCC---eecCCCCHHHEEEeCCCcEEEechHHHhhhhccCccccccccccccccCcc
Confidence            35888999999999999999999999   9999999999999999999999997654322111100     011122355


Q ss_pred             ccCCcccccCC--CcccccceEehhHHHHHHHhcccCCCCcCCCccc-ccccccC-------------------------
Q 041793           80 GYMAPEYASDG--KFSVKSDVFSFGILLLEIISGKKNRGFYHSDNKL-NLIGHVS-------------------------  131 (224)
Q Consensus        80 ~y~aPE~~~~~--~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~-~~~~~~~-------------------------  131 (224)
                      .|++||.+.+.  .++.++|+|||||+++++++|+.||......... .......                         
T Consensus       173 ~y~aPE~~~~~~~~~~~~~DiwslG~~l~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  252 (328)
T cd08226         173 PWLSPELLRQDLYGYNVKSDIYSVGITACELATGRVPFQDMLRTQMLLQKLKGPPYSPLDITTFPCEESRMKNSQSGVDS  252 (328)
T ss_pred             CccChhhhcCCCCCCCchhhHHHHHHHHHHHHhCCCCCCCcChHHHHHHHhcCCCCCCccccccchhhhhhccchhhhhc
Confidence            79999998764  4679999999999999999999998653321110 0000000                         


Q ss_pred             ----------CCccccCccccCCcCHHHHHHHHHHHHHhccCCCCCCCChHHHHHH
Q 041793          132 ----------MPSQLIDPCIQGSFNLVEVIRCIHIGLLCVQQHPKDRPSMPSVILM  177 (224)
Q Consensus       132 ----------~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dp~~Rps~~~v~~~  177 (224)
                                .....................+.+|+.+||+.||++|||+.++++.
T Consensus       253 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~Rpta~e~l~~  308 (328)
T cd08226         253 GIGESVVAAGMTQTMTSERLRTPSSKTFSPAFQNLVELCLQQDPEKRPSASSLLSH  308 (328)
T ss_pred             ccccchhccccccccccccccchhhhhhhHHHHHHHHHHccCCcccCCCHHHHhhC
Confidence                      0000000111111122234567899999999999999999999764


No 316
>KOG0666 consensus Cyclin C-dependent kinase CDK8 [Transcription]
Probab=99.93  E-value=7.4e-26  Score=175.30  Aligned_cols=114  Identities=30%  Similarity=0.397  Sum_probs=96.4

Q ss_pred             CCCCCChHHHHHHHHHHHHHHhhhhcCCCCceEecCCCCCceEECCC----CCceEeeecceeecCCCCCCC-ccccccc
Q 041793            3 RCKILDWPKRFHIICGTARGVMYLHQDSRLRIIHRDLKASNVLLDQD----MNPKISDFGLARAFGGDEIEG-NTNRVIG   77 (224)
Q Consensus         3 ~~~~l~~~~~~~i~~qi~~~l~~Lh~~~~~~i~H~dl~~~nil~~~~----~~~kl~df~~~~~~~~~~~~~-~~~~~~~   77 (224)
                      +.+.++-..+..|+.||++|+.|||++.   |+||||||.||++..+    |.+|++|+|+++.+.+.-... .....+-
T Consensus       125 ~~~~lp~~mvKsilwQil~Gv~YLH~NW---vlHRDLKPaNIlvmgdgperG~VKIaDlGlaR~~~~plkpl~s~d~VVV  201 (438)
T KOG0666|consen  125 KAKQLPRSMVKSILWQILDGVHYLHSNW---VLHRDLKPANILVMGDGPERGRVKIADLGLARLFNNPLKPLASLDPVVV  201 (438)
T ss_pred             hhccCCHHHHHHHHHHHHhhhHHHhhhh---eeeccCCcceEEEeccCCccCeeEeecccHHHHhhccccccccCCceEE
Confidence            4467888999999999999999999999   9999999999999877    899999999999886543222 2233456


Q ss_pred             ccccCCcccccCCC-cccccceEehhHHHHHHHhcccCCCCcC
Q 041793           78 TYGYMAPEYASDGK-FSVKSDVFSFGILLLEIISGKKNRGFYH  119 (224)
Q Consensus        78 ~~~y~aPE~~~~~~-~~~~~Di~slG~il~~l~~g~~p~~~~~  119 (224)
                      |++|+|||++.|.. |+.+.|+|+.|||+.||++-++.|.+..
T Consensus       202 TiWYRAPELLLGa~hYT~AiDvWAiGCIfaElLtl~PlF~g~E  244 (438)
T KOG0666|consen  202 TIWYRAPELLLGARHYTKAIDVWAIGCIFAELLTLEPLFKGRE  244 (438)
T ss_pred             EEEecChHHhcccccccchhhhHHHHHHHHHHHccCccccchh
Confidence            88999999998865 8999999999999999999887775533


No 317
>cd07860 STKc_CDK2_3 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase 2 and 3. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 2 (CDK2) and CDK3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK2/3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK2 is regulated by cyclin E or cyclin A. Upon activation by cyclin E, it phosphorylates the retinoblastoma (pRb) protein which activates E2F mediated transcription and allows cells to move into S phase. The CDK2/cyclin A complex 
Probab=99.93  E-value=7.9e-26  Score=180.53  Aligned_cols=167  Identities=22%  Similarity=0.295  Sum_probs=116.8

Q ss_pred             CCCCChHHHHHHHHHHHHHHhhhhcCCCCceEecCCCCCceEECCCCCceEeeecceeecCCCCCCCcccccccccccCC
Q 041793            4 CKILDWPKRFHIICGTARGVMYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDEIEGNTNRVIGTYGYMA   83 (224)
Q Consensus         4 ~~~l~~~~~~~i~~qi~~~l~~Lh~~~~~~i~H~dl~~~nil~~~~~~~kl~df~~~~~~~~~~~~~~~~~~~~~~~y~a   83 (224)
                      ...+++.+++.++.|++.||+|||+.+   ++|+||+|+||+++.++.++++|||++.......  .......++..|+|
T Consensus        94 ~~~l~~~~~~~~~~~i~~~l~~lh~~~---i~H~~l~p~nill~~~~~~~l~dfg~~~~~~~~~--~~~~~~~~~~~y~a  168 (284)
T cd07860          94 LSGIPLPLIKSYLFQLLQGLAFCHSHR---VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPV--RTYTHEVVTLWYRA  168 (284)
T ss_pred             CCCCCHHHHHHHHHHHHHHHHHHHHCC---eecCCCCHHHEEECCCCCEEEeeccchhhcccCc--cccccccccccccC
Confidence            467899999999999999999999999   9999999999999999999999999987553221  11122345678999


Q ss_pred             cccccCCC-cccccceEehhHHHHHHHhcccCCCCcCCCccc-ccccccCCCcc---------------c---cCccccC
Q 041793           84 PEYASDGK-FSVKSDVFSFGILLLEIISGKKNRGFYHSDNKL-NLIGHVSMPSQ---------------L---IDPCIQG  143 (224)
Q Consensus        84 PE~~~~~~-~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~-~~~~~~~~~~~---------------~---~~~~~~~  143 (224)
                      ||.+.+.. ++.++|+||||++++++++|+.||......+.. ........+..               .   .......
T Consensus       169 PE~~~~~~~~~~~~Dv~slG~il~~l~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  248 (284)
T cd07860         169 PEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSLPDYKPSFPKWARQDFSK  248 (284)
T ss_pred             CeEEecCCCCCcHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHhCCCChhhhhhhhHHHHHHhhcccccccCHHH
Confidence            99886644 578899999999999999999998543211100 00000000000               0   0000000


Q ss_pred             CcCHHHHHHHHHHHHHhccCCCCCCCChHHHHH
Q 041793          144 SFNLVEVIRCIHIGLLCVQQHPKDRPSMPSVIL  176 (224)
Q Consensus       144 ~~~~~~~~~~~~li~~cl~~dp~~Rps~~~v~~  176 (224)
                      ... .-...+.+++.+||+.||++||+++++++
T Consensus       249 ~~~-~~~~~~~~li~~~l~~~P~~Rpt~~~~l~  280 (284)
T cd07860         249 VVP-PLDEDGRDLLSQMLHYDPNKRISAKAALA  280 (284)
T ss_pred             Hcc-cCCHHHHHHHHHhcCCCcccCCCHHHHhc
Confidence            000 00123568999999999999999999975


No 318
>cd06652 STKc_MEKK2 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 2. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 2 (MEKK2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK2 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates the MAPK kinase MEK5 (or MKK5), which in turn phosphorylates and activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK2 also activates ERK1/2, c-Jun N-terminal kinase (JNK) and p38 through their re
Probab=99.93  E-value=1.4e-25  Score=177.51  Aligned_cols=159  Identities=25%  Similarity=0.337  Sum_probs=118.2

Q ss_pred             CCCChHHHHHHHHHHHHHHhhhhcCCCCceEecCCCCCceEECCCCCceEeeecceeecCCCCCC-CcccccccccccCC
Q 041793            5 KILDWPKRFHIICGTARGVMYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDEIE-GNTNRVIGTYGYMA   83 (224)
Q Consensus         5 ~~l~~~~~~~i~~qi~~~l~~Lh~~~~~~i~H~dl~~~nil~~~~~~~kl~df~~~~~~~~~~~~-~~~~~~~~~~~y~a   83 (224)
                      +.+++..++.++.|++.||.|||+.+   ++|+||+|+||+++.++.++|+|||++......... .......++..|+|
T Consensus       101 ~~~~~~~~~~~~~~l~~~l~~lH~~~---i~H~dl~p~nil~~~~~~~~l~Dfg~~~~~~~~~~~~~~~~~~~~~~~y~a  177 (265)
T cd06652         101 GALTENVTRKYTRQILEGVSYLHSNM---IVHRDIKGANILRDSVGNVKLGDFGASKRLQTICLSGTGMKSVTGTPYWMS  177 (265)
T ss_pred             CCCCHHHHHHHHHHHHHHHHHHHhCC---EecCCCCHHHEEecCCCCEEECcCccccccccccccccccccCCCCccccC
Confidence            56788999999999999999999999   999999999999999999999999998765322111 11222356778999


Q ss_pred             cccccCCCcccccceEehhHHHHHHHhcccCCCCcCCCcccccccccCCCccccCccccCCcCHHHHHHHHHHHHHhccC
Q 041793           84 PEYASDGKFSVKSDVFSFGILLLEIISGKKNRGFYHSDNKLNLIGHVSMPSQLIDPCIQGSFNLVEVIRCIHIGLLCVQQ  163 (224)
Q Consensus        84 PE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~  163 (224)
                      ||.+.+..++.++|+||||+++|++++|+.||........  .......+   ..+    .........+.+++.+||. 
T Consensus       178 PE~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~~~~~~~--~~~~~~~~---~~~----~~~~~~~~~~~~~i~~~l~-  247 (265)
T cd06652         178 PEVISGEGYGRKADIWSVGCTVVEMLTEKPPWAEFEAMAA--IFKIATQP---TNP----VLPPHVSDHCRDFLKRIFV-  247 (265)
T ss_pred             hhhhcCCCCCcchhHHHHHHHHHHHhhCCCCCCccchHHH--HHHHhcCC---CCC----CCchhhCHHHHHHHHHHhc-
Confidence            9999888889999999999999999999999864322211  11111100   011    1111222456778889984 


Q ss_pred             CCCCCCChHHHHH
Q 041793          164 HPKDRPSMPSVIL  176 (224)
Q Consensus       164 dp~~Rps~~~v~~  176 (224)
                      +|++||++++|++
T Consensus       248 ~p~~Rp~~~~il~  260 (265)
T cd06652         248 EAKLRPSADELLR  260 (265)
T ss_pred             ChhhCCCHHHHhc
Confidence            9999999999975


No 319
>KOG0196 consensus Tyrosine kinase, EPH (ephrin) receptor family [Signal transduction mechanisms]
Probab=99.93  E-value=1.4e-26  Score=197.01  Aligned_cols=169  Identities=27%  Similarity=0.425  Sum_probs=131.6

Q ss_pred             CCCCCCCChHHHHHHHHHHHHHHhhhhcCCCCceEecCCCCCceEECCCCCceEeeecceeecCCCCCCCccccccc--c
Q 041793            1 QERCKILDWPKRFHIICGTARGVMYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDEIEGNTNRVIG--T   78 (224)
Q Consensus         1 ~~~~~~l~~~~~~~i~~qi~~~l~~Lh~~~~~~i~H~dl~~~nil~~~~~~~kl~df~~~~~~~~~~~~~~~~~~~~--~   78 (224)
                      |+.++.|++-+...++..|+.|++||-+.+   ++||||.+.|||++.+-.+|++|||+++.+.+.. .....+..|  +
T Consensus       722 R~~DGqftviQLVgMLrGIAsGMkYLsdm~---YVHRDLAARNILVNsnLvCKVsDFGLSRvledd~-~~~ytt~GGKIP  797 (996)
T KOG0196|consen  722 RQNDGQFTVIQLVGMLRGIASGMKYLSDMN---YVHRDLAARNILVNSNLVCKVSDFGLSRVLEDDP-EAAYTTLGGKIP  797 (996)
T ss_pred             hhcCCceEeehHHHHHHHHHHHhHHHhhcC---chhhhhhhhheeeccceEEEeccccceeecccCC-CccccccCCccc
Confidence            356788999999999999999999999999   9999999999999999999999999999775543 222222222  4


Q ss_pred             cccCCcccccCCCcccccceEehhHHHHHHH-hcccCCCCcCCCcccccccccCCCccccCccccCCcCHHHHHHHHHHH
Q 041793           79 YGYMAPEYASDGKFSVKSDVFSFGILLLEII-SGKKNRGFYHSDNKLNLIGHVSMPSQLIDPCIQGSFNLVEVIRCIHIG  157 (224)
Q Consensus        79 ~~y~aPE~~~~~~~~~~~Di~slG~il~~l~-~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li  157 (224)
                      ++|.|||.+...+++.++|+||||+++||.+ .|..||-.....+.   ++.+.....++.+ +  +.+    ..+-+||
T Consensus       798 iRWTAPEAIa~RKFTsASDVWSyGIVmWEVmSyGERPYWdmSNQdV---IkaIe~gyRLPpP-m--DCP----~aL~qLM  867 (996)
T KOG0196|consen  798 IRWTAPEAIAYRKFTSASDVWSYGIVMWEVMSYGERPYWDMSNQDV---IKAIEQGYRLPPP-M--DCP----AALYQLM  867 (996)
T ss_pred             eeecChhHhhhcccCchhhccccceEEEEecccCCCcccccchHHH---HHHHHhccCCCCC-C--CCc----HHHHHHH
Confidence            6899999999999999999999999999977 48888533333333   3333322222221 1  111    2466899


Q ss_pred             HHhccCCCCCCCChHHHHHHhccCCC
Q 041793          158 LLCVQQHPKDRPSMPSVILMLGSEIV  183 (224)
Q Consensus       158 ~~cl~~dp~~Rps~~~v~~~L~~~~~  183 (224)
                      +.||+.|-.+||.|.+|+..|.+.+.
T Consensus       868 ldCWqkdR~~RP~F~qiV~~lDklIr  893 (996)
T KOG0196|consen  868 LDCWQKDRNRRPKFAQIVSTLDKLIR  893 (996)
T ss_pred             HHHHHHHhhcCCCHHHHHHHHHHHhc
Confidence            99999999999999999999987644


No 320
>cd07852 STKc_MAPK15 Catalytic domain of the Serine/Threonine Kinase, Mitogen-Activated Protein Kinase 15. Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase 15 (MAPK15) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK15 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. Human MAPK15 is also called Extracellular signal Regulated Kinase 8 (ERK8) while the rat protein is called ERK7. ERK7 and ERK8 display both similar and different biochemical properties. They autophosphorylate and activate themselves and do not require upstream activating kinases. ERK7 is constitutively active and is not affected by extracellular stimul
Probab=99.93  E-value=8.9e-26  Score=184.77  Aligned_cols=169  Identities=25%  Similarity=0.323  Sum_probs=119.3

Q ss_pred             CCChHHHHHHHHHHHHHHhhhhcCCCCceEecCCCCCceEECCCCCceEeeecceeecCCCCCC---CcccccccccccC
Q 041793            6 ILDWPKRFHIICGTARGVMYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDEIE---GNTNRVIGTYGYM   82 (224)
Q Consensus         6 ~l~~~~~~~i~~qi~~~l~~Lh~~~~~~i~H~dl~~~nil~~~~~~~kl~df~~~~~~~~~~~~---~~~~~~~~~~~y~   82 (224)
                      .+++..++.++.||+.||.|||+.|   |+|+||+|+||+++.++.++++|||++.........   .......++..|+
T Consensus       103 ~~~~~~~~~i~~qi~~~L~~LH~~~---i~H~dl~p~nill~~~~~~kl~d~g~~~~~~~~~~~~~~~~~~~~~~~~~y~  179 (337)
T cd07852         103 ILEDVHKRYIMYQLLKALKYIHSGN---VIHRDLKPSNILLNSDCRVKLADFGLARSLSELEENPENPVLTDYVATRWYR  179 (337)
T ss_pred             CCCHHHHHHHHHHHHHHHHHHHHCC---eecCCCCHHHEEEcCCCcEEEeeccchhccccccccccCcchhccccccccc
Confidence            6889999999999999999999999   999999999999999999999999998865433211   1222345788899


Q ss_pred             CcccccC-CCcccccceEehhHHHHHHHhcccCCCCcCCCcccccc-cccCC-------------CccccCccc-cCCcC
Q 041793           83 APEYASD-GKFSVKSDVFSFGILLLEIISGKKNRGFYHSDNKLNLI-GHVSM-------------PSQLIDPCI-QGSFN  146 (224)
Q Consensus        83 aPE~~~~-~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~-~~~~~-------------~~~~~~~~~-~~~~~  146 (224)
                      |||.+.+ ..++.++|+||||+++|+|++|+.||......+....+ .....             .....+... .....
T Consensus       180 aPE~~~~~~~~~~~sDi~slG~~l~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  259 (337)
T cd07852         180 APEILLGSTRYTKGVDMWSVGCILGEMLLGKPLFPGTSTLNQLEKIIEVIGPPSAEDIESIKSPFAATMLDSLPSRPRKP  259 (337)
T ss_pred             CceeeeccccccccchHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCCHHHHHHHHhhhHHHhhhhcccccccc
Confidence            9998755 45688999999999999999999998643322111000 00000             000000000 00000


Q ss_pred             HH-----HHHHHHHHHHHhccCCCCCCCChHHHHHH
Q 041793          147 LV-----EVIRCIHIGLLCVQQHPKDRPSMPSVILM  177 (224)
Q Consensus       147 ~~-----~~~~~~~li~~cl~~dp~~Rps~~~v~~~  177 (224)
                      ..     ....+.+++.+||+.||++|||+.++++.
T Consensus       260 ~~~~~~~~~~~l~~li~~~l~~~P~~Rps~~~il~~  295 (337)
T cd07852         260 LDELLPKASDDALDLLKKLLVFNPNKRLTAEEALEH  295 (337)
T ss_pred             hhhhccCCCHHHHHHHHHhccCCcccccCHHHHhhC
Confidence            00     12356789999999999999999999874


No 321
>cd06620 PKc_MAPKK_Byr1_like Catalytic domain of fungal Byr1-like dual-specificity MAP kinase kinases. Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, fungal Byr1-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include
Probab=99.93  E-value=1e-25  Score=180.12  Aligned_cols=162  Identities=27%  Similarity=0.418  Sum_probs=121.0

Q ss_pred             CCCCChHHHHHHHHHHHHHHhhhhc-CCCCceEecCCCCCceEECCCCCceEeeecceeecCCCCCCCcccccccccccC
Q 041793            4 CKILDWPKRFHIICGTARGVMYLHQ-DSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDEIEGNTNRVIGTYGYM   82 (224)
Q Consensus         4 ~~~l~~~~~~~i~~qi~~~l~~Lh~-~~~~~i~H~dl~~~nil~~~~~~~kl~df~~~~~~~~~~~~~~~~~~~~~~~y~   82 (224)
                      .+.+++..+..++.+++.||.|||+ .+   ++|+||+|+||+++.++.++++|||++.......    .....++..|+
T Consensus        97 ~~~~~~~~~~~~~~~i~~~l~~LH~~~~---i~H~dl~p~nil~~~~~~~~l~d~gl~~~~~~~~----~~~~~~~~~~~  169 (284)
T cd06620          97 GGPIPVEILGKIAVAVVEGLTYLYNVHR---IMHRDIKPSNILVNSRGQIKLCDFGVSGELINSI----ADTFVGTSTYM  169 (284)
T ss_pred             ccCCCHHHHHHHHHHHHHHHHHHHHhcC---eeccCCCHHHEEECCCCcEEEccCCcccchhhhc----cCccccCcccC
Confidence            4578999999999999999999997 47   9999999999999999999999999886542221    12345788999


Q ss_pred             CcccccCCCcccccceEehhHHHHHHHhcccCCCCcCCCccc--------ccccccCCCccccCccccCCcCHHHHHHHH
Q 041793           83 APEYASDGKFSVKSDVFSFGILLLEIISGKKNRGFYHSDNKL--------NLIGHVSMPSQLIDPCIQGSFNLVEVIRCI  154 (224)
Q Consensus        83 aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  154 (224)
                      +||.+.+..++.++|+|||||+++++++|..||.........        ........ ..  .+...   .......+.
T Consensus       170 aPE~~~~~~~~~~~Di~slG~~l~~l~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~-~~--~~~~~---~~~~~~~~~  243 (284)
T cd06620         170 SPERIQGGKYTVKSDVWSLGISIIELALGKFPFAFSNIDDDGQDDPMGILDLLQQIVQ-EP--PPRLP---SSDFPEDLR  243 (284)
T ss_pred             CHHHHccCCCCccchHHHHHHHHHHHHhCCCCCcccchhhhhhhhhhHHHHHHHHHhh-cc--CCCCC---chhcCHHHH
Confidence            999998888899999999999999999999998653322110        00000000 00  00000   011123467


Q ss_pred             HHHHHhccCCCCCCCChHHHHHHh
Q 041793          155 HIGLLCVQQHPKDRPSMPSVILML  178 (224)
Q Consensus       155 ~li~~cl~~dp~~Rps~~~v~~~L  178 (224)
                      +|+.+||+.||++||++.++++..
T Consensus       244 ~li~~~l~~dp~~Rpt~~e~~~~~  267 (284)
T cd06620         244 DFVDACLLKDPTERPTPQQLCAMP  267 (284)
T ss_pred             HHHHHHhcCCcccCcCHHHHhcCc
Confidence            899999999999999999999864


No 322
>cd08215 STKc_Nek Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase (Nek) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek family is composed of 11 different mammalian members (Nek1-11) with similarity to the catalytic domain of Aspergillus nidulans NIMA kinase, the founding member of the Nek family which was identified in a screen for cell cycle mutants that were prevented from entering mitosis. Neks contain a conserved N-terminal catalytic domain and a more divergent C-terminal regulatory region of various sizes and structures. They 
Probab=99.93  E-value=1.2e-25  Score=176.32  Aligned_cols=158  Identities=23%  Similarity=0.335  Sum_probs=122.0

Q ss_pred             CCCCChHHHHHHHHHHHHHHhhhhcCCCCceEecCCCCCceEECCCCCceEeeecceeecCCCCCCCcccccccccccCC
Q 041793            4 CKILDWPKRFHIICGTARGVMYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDEIEGNTNRVIGTYGYMA   83 (224)
Q Consensus         4 ~~~l~~~~~~~i~~qi~~~l~~Lh~~~~~~i~H~dl~~~nil~~~~~~~kl~df~~~~~~~~~~~~~~~~~~~~~~~y~a   83 (224)
                      ...+++.+++.++.+++.||.|||+.|   ++|+||+|+||+++.++.++++|||.+.......  .......++..|++
T Consensus        97 ~~~~~~~~~~~i~~~i~~~l~~lh~~~---~~H~dl~~~nil~~~~~~~~l~d~~~~~~~~~~~--~~~~~~~~~~~y~~  171 (258)
T cd08215          97 GKPFPEEQILDWFVQLCLALKYLHSRK---ILHRDIKPQNIFLTSNGLVKLGDFGISKVLSSTV--DLAKTVVGTPYYLS  171 (258)
T ss_pred             CCCcCHHHHHHHHHHHHHHHHHHHhCC---EecccCChHHeEEcCCCcEEECCccceeecccCc--ceecceeeeecccC
Confidence            477999999999999999999999999   9999999999999999999999999998764432  11223456778999


Q ss_pred             cccccCCCcccccceEehhHHHHHHHhcccCCCCcCCCcccccccccCCCccccCccccCCcCHHHHHHHHHHHHHhccC
Q 041793           84 PEYASDGKFSVKSDVFSFGILLLEIISGKKNRGFYHSDNKLNLIGHVSMPSQLIDPCIQGSFNLVEVIRCIHIGLLCVQQ  163 (224)
Q Consensus        84 PE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~  163 (224)
                      ||.+.+..++.++|+|++|++++++++|..||................     .. ......    ...+.+++.+||..
T Consensus       172 pe~~~~~~~~~~~Dv~slG~~~~~l~~g~~p~~~~~~~~~~~~~~~~~-----~~-~~~~~~----~~~~~~~i~~~l~~  241 (258)
T cd08215         172 PELCQNKPYNYKSDIWSLGCVLYELCTLKHPFEGENLLELALKILKGQ-----YP-PIPSQY----SSELRNLVSSLLQK  241 (258)
T ss_pred             hhHhccCCCCccccHHHHHHHHHHHHcCCCCCCCCcHHHHHHHHhcCC-----CC-CCCCCC----CHHHHHHHHHHcCC
Confidence            999888888999999999999999999999975443221111111000     00 011111    13467889999999


Q ss_pred             CCCCCCChHHHHH
Q 041793          164 HPKDRPSMPSVIL  176 (224)
Q Consensus       164 dp~~Rps~~~v~~  176 (224)
                      +|++||++.++++
T Consensus       242 ~p~~Rp~~~~ll~  254 (258)
T cd08215         242 DPEERPSIAQILQ  254 (258)
T ss_pred             ChhhCcCHHHHhc
Confidence            9999999999975


No 323
>cd06614 STKc_PAK Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase. Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAK deregulation is associated with tumor development. PAKs from higher eukaryotes are classified into two grou
Probab=99.92  E-value=2e-25  Score=178.49  Aligned_cols=159  Identities=27%  Similarity=0.435  Sum_probs=119.3

Q ss_pred             CCChHHHHHHHHHHHHHHhhhhcCCCCceEecCCCCCceEECCCCCceEeeecceeecCCCCCCCcccccccccccCCcc
Q 041793            6 ILDWPKRFHIICGTARGVMYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDEIEGNTNRVIGTYGYMAPE   85 (224)
Q Consensus         6 ~l~~~~~~~i~~qi~~~l~~Lh~~~~~~i~H~dl~~~nil~~~~~~~kl~df~~~~~~~~~~~~~~~~~~~~~~~y~aPE   85 (224)
                      .+++..++.++.|++.||.|||+.|   ++|+||+|+||+++.++.++++|||++........  ......++..|++||
T Consensus       112 ~l~~~~~~~i~~~i~~~L~~lH~~g---i~H~dl~p~ni~i~~~~~~~l~d~~~~~~~~~~~~--~~~~~~~~~~y~~PE  186 (286)
T cd06614         112 RMNEPQIAYVCREVLQGLEYLHSQN---VIHRDIKSDNILLSKDGSVKLADFGFAAQLTKEKS--KRNSVVGTPYWMAPE  186 (286)
T ss_pred             CCCHHHHHHHHHHHHHHHHHHHhCC---eeeCCCChhhEEEcCCCCEEECccchhhhhccchh--hhccccCCcccCCHh
Confidence            7899999999999999999999999   99999999999999999999999998865432211  112234567899999


Q ss_pred             cccCCCcccccceEehhHHHHHHHhcccCCCCcCCCcccccccccCCCccccCccccCCcCHHHHHHHHHHHHHhccCCC
Q 041793           86 YASDGKFSVKSDVFSFGILLLEIISGKKNRGFYHSDNKLNLIGHVSMPSQLIDPCIQGSFNLVEVIRCIHIGLLCVQQHP  165 (224)
Q Consensus        86 ~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dp  165 (224)
                      .+.+..++.++|+||||+++|++++|+.||................. .....   ....    ...+.+++.+||+.+|
T Consensus       187 ~~~~~~~~~~~Dv~slGvil~~l~~g~~p~~~~~~~~~~~~~~~~~~-~~~~~---~~~~----~~~l~~li~~~l~~~p  258 (286)
T cd06614         187 VIKRKDYGPKVDIWSLGIMCIEMAEGEPPYLREPPLRALFLITTKGI-PPLKN---PEKW----SPEFKDFLNKCLVKDP  258 (286)
T ss_pred             HhcCCCCCCccccHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhcCC-CCCcc---hhhC----CHHHHHHHHHHhccCh
Confidence            99888889999999999999999999999764332211111111110 00000   0001    1346788999999999


Q ss_pred             CCCCChHHHHHH
Q 041793          166 KDRPSMPSVILM  177 (224)
Q Consensus       166 ~~Rps~~~v~~~  177 (224)
                      .+||++.+|+..
T Consensus       259 ~~Rpt~~~il~~  270 (286)
T cd06614         259 EKRPSAEELLQH  270 (286)
T ss_pred             hhCcCHHHHhhC
Confidence            999999999763


No 324
>PTZ00266 NIMA-related protein kinase; Provisional
Probab=99.92  E-value=2.5e-25  Score=198.84  Aligned_cols=160  Identities=24%  Similarity=0.288  Sum_probs=116.8

Q ss_pred             CCCCChHHHHHHHHHHHHHHhhhhcCCC----CceEecCCCCCceEECC-----------------CCCceEeeecceee
Q 041793            4 CKILDWPKRFHIICGTARGVMYLHQDSR----LRIIHRDLKASNVLLDQ-----------------DMNPKISDFGLARA   62 (224)
Q Consensus         4 ~~~l~~~~~~~i~~qi~~~l~~Lh~~~~----~~i~H~dl~~~nil~~~-----------------~~~~kl~df~~~~~   62 (224)
                      .+.|++..++.|+.||+.||.|||+.+.    ..|+|+||||+|||++.                 .+.++|+|||++..
T Consensus       112 ~g~L~E~~Il~Ia~QIL~ALaYLHs~g~~~~~k~IVHRDLKPeNILL~s~~~~lg~i~~~~~n~ng~~iVKLsDFGlAr~  191 (1021)
T PTZ00266        112 FGKIEEHAIVDITRQLLHALAYCHNLKDGPNGERVLHRDLKPQNIFLSTGIRHIGKITAQANNLNGRPIAKIGDFGLSKN  191 (1021)
T ss_pred             cCCCCHHHHHHHHHHHHHHHHHHHhcccccccCCceeccCcHHHeEeecCccccccccccccccCCCCceEEccCCcccc
Confidence            3579999999999999999999998431    12999999999999954                 24489999999976


Q ss_pred             cCCCCCCCcccccccccccCCcccccC--CCcccccceEehhHHHHHHHhcccCCCCcCCCcccccccccCCCccccCcc
Q 041793           63 FGGDEIEGNTNRVIGTYGYMAPEYASD--GKFSVKSDVFSFGILLLEIISGKKNRGFYHSDNKLNLIGHVSMPSQLIDPC  140 (224)
Q Consensus        63 ~~~~~~~~~~~~~~~~~~y~aPE~~~~--~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~  140 (224)
                      .....   ......+++.|+|||++.+  ..++.++|||||||++|+|++|..||......  ..++..+......+.  
T Consensus       192 l~~~s---~~~s~vGTp~YmAPEvL~ge~~~~s~KSDVWSLG~ILYELLTGk~PF~~~~~~--~qli~~lk~~p~lpi--  264 (1021)
T PTZ00266        192 IGIES---MAHSCVGTPYYWSPELLLHETKSYDDKSDMWALGCIIYELCSGKTPFHKANNF--SQLISELKRGPDLPI--  264 (1021)
T ss_pred             ccccc---cccccCCCccccCHHHHhccCCCCCchhHHHHHHHHHHHHHHCCCCCCcCCcH--HHHHHHHhcCCCCCc--
Confidence            53321   1223467889999999864  34789999999999999999999998643321  112211111111110  


Q ss_pred             ccCCcCHHHHHHHHHHHHHhccCCCCCCCChHHHHH
Q 041793          141 IQGSFNLVEVIRCIHIGLLCVQQHPKDRPSMPSVIL  176 (224)
Q Consensus       141 ~~~~~~~~~~~~~~~li~~cl~~dp~~Rps~~~v~~  176 (224)
                        ...    ...+.+||..||+.+|++||++.+++.
T Consensus       265 --~~~----S~eL~dLI~~~L~~dPeeRPSa~QlL~  294 (1021)
T PTZ00266        265 --KGK----SKELNILIKNLLNLSAKERPSALQCLG  294 (1021)
T ss_pred             --CCC----CHHHHHHHHHHhcCChhHCcCHHHHhc
Confidence              011    134678999999999999999999984


No 325
>cd05624 STKc_MRCK_beta Catalytic domain of the Protein Serine/Threonine Kinase, DMPK-related cell division control protein 42 binding kinase beta. Serine/Threonine Kinases (STKs), DMPK-like subfamily, DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK) beta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MRCK is activated via interaction with the small GTPase Cdc42. MRCK/Cdc42 signaling mediates myosin-dependent cell motility. MRCKbeta is expressed ubiquitously in many tissues.
Probab=99.92  E-value=4.9e-25  Score=180.07  Aligned_cols=164  Identities=20%  Similarity=0.234  Sum_probs=116.0

Q ss_pred             CCCCChHHHHHHHHHHHHHHhhhhcCCCCceEecCCCCCceEECCCCCceEeeecceeecCCCCCCCcccccccccccCC
Q 041793            4 CKILDWPKRFHIICGTARGVMYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDEIEGNTNRVIGTYGYMA   83 (224)
Q Consensus         4 ~~~l~~~~~~~i~~qi~~~l~~Lh~~~~~~i~H~dl~~~nil~~~~~~~kl~df~~~~~~~~~~~~~~~~~~~~~~~y~a   83 (224)
                      .+.+++..+..++.||+.||+|||+.+   |+||||||+||+++.++.++|+|||++......... ......|+..|+|
T Consensus        96 ~~~l~~~~~~~~~~qi~~~L~~lH~~~---iiHrDlkp~Nill~~~~~~kl~DfG~a~~~~~~~~~-~~~~~~gt~~y~a  171 (331)
T cd05624          96 EDRLPEDMARFYIAEMVLAIHSIHQLH---YVHRDIKPDNVLLDMNGHIRLADFGSCLKMNQDGTV-QSSVAVGTPDYIS  171 (331)
T ss_pred             cCCCCHHHHHHHHHHHHHHHHHHHHCC---eeeccCchHHEEEcCCCCEEEEeccceeeccCCCce-eeccccCCcccCC
Confidence            457899999999999999999999999   999999999999999999999999998765432211 1122457889999


Q ss_pred             cccccC-----CCcccccceEehhHHHHHHHhcccCCCCcCCCcccccccccCCCccccCccccCCcCHHHHHHHHHHHH
Q 041793           84 PEYASD-----GKFSVKSDVFSFGILLLEIISGKKNRGFYHSDNKLNLIGHVSMPSQLIDPCIQGSFNLVEVIRCIHIGL  158 (224)
Q Consensus        84 PE~~~~-----~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~  158 (224)
                      ||.+.+     ..++.++|+||||+++|+|++|+.||...........+......... ..... ..    ...+.+++.
T Consensus       172 PE~~~~~~~~~~~~~~~~DiwSlGvil~ell~g~~Pf~~~~~~~~~~~i~~~~~~~~~-p~~~~-~~----~~~~~~li~  245 (331)
T cd05624         172 PEILQAMEDGMGKYGPECDWWSLGVCMYEMLYGETPFYAESLVETYGKIMNHEERFQF-PSHIT-DV----SEEAKDLIQ  245 (331)
T ss_pred             HHHHhccccCCCCCCCcccEEeeehhhhhhhhCCCCccCCCHHHHHHHHHcCCCcccC-CCccc-cC----CHHHHHHHH
Confidence            999865     45788999999999999999999998643322111111100000000 11110 11    134667888


Q ss_pred             HhccCCCCC--CCChHHHHHH
Q 041793          159 LCVQQHPKD--RPSMPSVILM  177 (224)
Q Consensus       159 ~cl~~dp~~--Rps~~~v~~~  177 (224)
                      +|+..++.+  |++++++++.
T Consensus       246 ~ll~~~~~~~~~~~~~~~~~h  266 (331)
T cd05624         246 RLICSRERRLGQNGIEDFKKH  266 (331)
T ss_pred             HHccCchhhcCCCCHHHHhcC
Confidence            999876654  4678888654


No 326
>cd06635 STKc_TAO1 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 1. Serine/threonine kinases (STKs), thousand-and-one amino acids 1 (TAO1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. TAO1 is sometimes referred to as prostate-derived sterile 20-like kinase 2 (PSK2). TAO1 activates the p38 MAPK through direct interaction with and activation of MEK3. TAO1 is highly expressed in the brain and may play a role in neuron
Probab=99.92  E-value=3.1e-25  Score=180.17  Aligned_cols=159  Identities=30%  Similarity=0.374  Sum_probs=119.1

Q ss_pred             CCCCChHHHHHHHHHHHHHHhhhhcCCCCceEecCCCCCceEECCCCCceEeeecceeecCCCCCCCcccccccccccCC
Q 041793            4 CKILDWPKRFHIICGTARGVMYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDEIEGNTNRVIGTYGYMA   83 (224)
Q Consensus         4 ~~~l~~~~~~~i~~qi~~~l~~Lh~~~~~~i~H~dl~~~nil~~~~~~~kl~df~~~~~~~~~~~~~~~~~~~~~~~y~a   83 (224)
                      ...+++.++..++.||+.||.|||+.+   ++|+||+|.||+++.++.++++|||++.....      .....++..|+|
T Consensus       119 ~~~l~~~~~~~i~~~i~~~l~~lH~~~---i~H~dL~p~Nil~~~~~~~kl~dfg~~~~~~~------~~~~~~~~~y~a  189 (317)
T cd06635         119 KKPLQEVEIAAITHGALQGLAYLHSHN---MIHRDIKAGNILLTEPGQVKLADFGSASIASP------ANSFVGTPYWMA  189 (317)
T ss_pred             cCCCCHHHHHHHHHHHHHHHHHHHHCC---cccCCCCcccEEECCCCCEEEecCCCccccCC------cccccCCccccC
Confidence            466899999999999999999999999   99999999999999999999999998765322      122356778999


Q ss_pred             ccccc---CCCcccccceEehhHHHHHHHhcccCCCCcCCCcccccccccCCCccccCccccCCcCHHHHHHHHHHHHHh
Q 041793           84 PEYAS---DGKFSVKSDVFSFGILLLEIISGKKNRGFYHSDNKLNLIGHVSMPSQLIDPCIQGSFNLVEVIRCIHIGLLC  160 (224)
Q Consensus        84 PE~~~---~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~c  160 (224)
                      ||.+.   +..++.++|+||||+++++|++|+.||...........+....   ...   ..   .......+.+++.+|
T Consensus       190 PE~~~~~~~~~~~~~~Dv~slGvil~el~~g~~p~~~~~~~~~~~~~~~~~---~~~---~~---~~~~~~~l~~li~~~  260 (317)
T cd06635         190 PEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMSALYHIAQNE---SPT---LQ---SNEWSDYFRNFVDSC  260 (317)
T ss_pred             hhhhhcCCCCCCCccccHHHHHHHHHHHHhCCCCCCCccHHHHHHHHHhcc---CCC---CC---CccccHHHHHHHHHH
Confidence            99874   4557899999999999999999999975432211111110000   000   00   001113467888999


Q ss_pred             ccCCCCCCCChHHHHHHhcc
Q 041793          161 VQQHPKDRPSMPSVILMLGS  180 (224)
Q Consensus       161 l~~dp~~Rps~~~v~~~L~~  180 (224)
                      |+.+|++||++.+|++.+-.
T Consensus       261 l~~~p~~Rpt~~~il~~~~~  280 (317)
T cd06635         261 LQKIPQDRPTSEELLKHMFV  280 (317)
T ss_pred             ccCCcccCcCHHHHHhChhh
Confidence            99999999999999986543


No 327
>cd07837 STKc_CdkB_plant Catalytic domain of the Serine/Threonine Kinase, Plant B-type Cyclin-Dependent protein Kinase. Serine/Threonine Kinases (STKs), Plant B-type Cyclin-Dependent protein Kinase (CdkB) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CdkB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. The plant-specific B-type CDKs are expressed from the late S to the M phase of the cell cycle. They are characterized by the cyclin binding motif PPT[A/T]LRE. They play a role in controlling mitosis and integrating developm
Probab=99.92  E-value=1.9e-25  Score=179.30  Aligned_cols=167  Identities=22%  Similarity=0.221  Sum_probs=116.8

Q ss_pred             CCCCChHHHHHHHHHHHHHHhhhhcCCCCceEecCCCCCceEECC-CCCceEeeecceeecCCCCCCCcccccccccccC
Q 041793            4 CKILDWPKRFHIICGTARGVMYLHQDSRLRIIHRDLKASNVLLDQ-DMNPKISDFGLARAFGGDEIEGNTNRVIGTYGYM   82 (224)
Q Consensus         4 ~~~l~~~~~~~i~~qi~~~l~~Lh~~~~~~i~H~dl~~~nil~~~-~~~~kl~df~~~~~~~~~~~~~~~~~~~~~~~y~   82 (224)
                      .+.+++.+++.++.||+.||.|||+.+   ++|+||+|+||+++. ++.++++|||++.........  .....++..|+
T Consensus       104 ~~~~~~~~~~~~~~qi~~~L~~LH~~~---i~H~dl~~~nil~~~~~~~~kl~dfg~~~~~~~~~~~--~~~~~~~~~~~  178 (295)
T cd07837         104 GRPLPAKTIKSFMYQLLKGVAHCHKHG---VMHRDLKPQNLLVDKQKGLLKIADLGLGRAFSIPVKS--YTHEIVTLWYR  178 (295)
T ss_pred             CCCCCHHHHHHHHHHHHHHHHHHHHCC---eeecCCChHHEEEecCCCeEEEeecccceecCCCccc--cCCcccccCCC
Confidence            356899999999999999999999999   999999999999998 889999999998765332111  11124567899


Q ss_pred             CcccccC-CCcccccceEehhHHHHHHHhcccCCCCcCCCcccc-cccccCCCccc-----------------cCccccC
Q 041793           83 APEYASD-GKFSVKSDVFSFGILLLEIISGKKNRGFYHSDNKLN-LIGHVSMPSQL-----------------IDPCIQG  143 (224)
Q Consensus        83 aPE~~~~-~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~-~~~~~~~~~~~-----------------~~~~~~~  143 (224)
                      |||.+.+ ..++.++|+||||+++|+|++|..||.......... .......+...                 .......
T Consensus       179 aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  258 (295)
T cd07837         179 APEVLLGSTHYSTPVDIWSVGCIFAEMSRKQPLFPGDSELQQLLHIFKLLGTPTEQVWPGVSKLRDWHEFPQWKPQDLSR  258 (295)
T ss_pred             ChHHhhCCCCCCchHHHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHHHhCCCChhhCcchhhccchhhcCcccchhHHH
Confidence            9998765 456899999999999999999999986432211100 00000000000                 0000000


Q ss_pred             CcCHHHHHHHHHHHHHhccCCCCCCCChHHHHH
Q 041793          144 SFNLVEVIRCIHIGLLCVQQHPKDRPSMPSVIL  176 (224)
Q Consensus       144 ~~~~~~~~~~~~li~~cl~~dp~~Rps~~~v~~  176 (224)
                      . .......+.++|.+||+.||++||++.+++.
T Consensus       259 ~-~~~~~~~~~~~i~~~l~~~P~~R~~~~eil~  290 (295)
T cd07837         259 A-VPDLSPEGLDLLQKMLRYDPAKRISAKAALT  290 (295)
T ss_pred             h-ccccCHHHHHHHHHHccCChhhcCCHHHHhc
Confidence            0 0001234678999999999999999999865


No 328
>PRK13184 pknD serine/threonine-protein kinase; Reviewed
Probab=99.92  E-value=1.7e-25  Score=198.91  Aligned_cols=166  Identities=20%  Similarity=0.239  Sum_probs=119.9

Q ss_pred             CCCChHHHHHHHHHHHHHHhhhhcCCCCceEecCCCCCceEECCCCCceEeeecceeecCCCCC----------------
Q 041793            5 KILDWPKRFHIICGTARGVMYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDEI----------------   68 (224)
Q Consensus         5 ~~l~~~~~~~i~~qi~~~l~~Lh~~~~~~i~H~dl~~~nil~~~~~~~kl~df~~~~~~~~~~~----------------   68 (224)
                      ..+++..++.++.||+.||.|||+.|   |+||||||+||+++.++.++++|||++........                
T Consensus       108 ~~lsv~~iL~I~~QIa~AL~yLHs~G---IIHRDLKPeNILLd~dg~vKLiDFGLAk~i~~~~~~~~~l~~~~~~s~~s~  184 (932)
T PRK13184        108 EKTSVGAFLSIFHKICATIEYVHSKG---VLHRDLKPDNILLGLFGEVVILDWGAAIFKKLEEEDLLDIDVDERNICYSS  184 (932)
T ss_pred             cccCHHHHHHHHHHHHHHHHHHHHCC---ccccCCchheEEEcCCCCEEEEecCcceecccccccccccccccccccccc
Confidence            34567788999999999999999999   99999999999999999999999999986521100                


Q ss_pred             CCcccccccccccCCcccccCCCcccccceEehhHHHHHHHhcccCCCCcCCCcccccccccCCCccccCccccCCcCHH
Q 041793           69 EGNTNRVIGTYGYMAPEYASDGKFSVKSDVFSFGILLLEIISGKKNRGFYHSDNKLNLIGHVSMPSQLIDPCIQGSFNLV  148 (224)
Q Consensus        69 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  148 (224)
                      ........|++.|+|||.+.+..++.++|+|||||++++|++|..||.......... ......+.... +  ....   
T Consensus       185 ~t~~g~~vGT~~YmAPE~l~g~~~S~kSDIWSLGVILyELLTG~~PF~~~~~~ki~~-~~~i~~P~~~~-p--~~~i---  257 (932)
T PRK13184        185 MTIPGKIVGTPDYMAPERLLGVPASESTDIYALGVILYQMLTLSFPYRRKKGRKISY-RDVILSPIEVA-P--YREI---  257 (932)
T ss_pred             cccCCCCCCCCCCCCHHHhcCCCCCcHhHHHHHHHHHHHHHHCCCCCCCcchhhhhh-hhhccChhhcc-c--cccC---
Confidence            001112468899999999999899999999999999999999999986532221110 00011111100 0  0011   


Q ss_pred             HHHHHHHHHHHhccCCCCCCC-ChHHHHHHhccC
Q 041793          149 EVIRCIHIGLLCVQQHPKDRP-SMPSVILMLGSE  181 (224)
Q Consensus       149 ~~~~~~~li~~cl~~dp~~Rp-s~~~v~~~L~~~  181 (224)
                       ...+.+++.+||+.||++|| +++++.+.|+..
T Consensus       258 -P~~L~~LI~rcL~~DP~kR~ss~eeLl~~Le~~  290 (932)
T PRK13184        258 -PPFLSQIAMKALAVDPAERYSSVQELKQDLEPH  290 (932)
T ss_pred             -CHHHHHHHHHHccCChhhCcCHHHHHHHHHHHH
Confidence             12356788899999999996 667777766543


No 329
>KOG0584 consensus Serine/threonine protein kinase [General function prediction only]
Probab=99.92  E-value=2.4e-26  Score=191.73  Aligned_cols=161  Identities=24%  Similarity=0.372  Sum_probs=124.0

Q ss_pred             CCCCCCChHHHHHHHHHHHHHHhhhhcCCCCceEecCCCCCceEECCC-CCceEeeecceeecCCCCCCCcccccccccc
Q 041793            2 ERCKILDWPKRFHIICGTARGVMYLHQDSRLRIIHRDLKASNVLLDQD-MNPKISDFGLARAFGGDEIEGNTNRVIGTYG   80 (224)
Q Consensus         2 ~~~~~l~~~~~~~i~~qi~~~l~~Lh~~~~~~i~H~dl~~~nil~~~~-~~~kl~df~~~~~~~~~~~~~~~~~~~~~~~   80 (224)
                      ++.+.++...+..|+.||+.||.|||++. |+|+|||||-+||||..+ |.+|++|+|+|......    ......||+.
T Consensus       135 kk~~~vn~kaik~W~RQILkGL~yLHs~~-PPIIHRDLKCDNIFinG~~G~VKIGDLGLAtl~r~s----~aksvIGTPE  209 (632)
T KOG0584|consen  135 KKHRRVNIKAIKSWCRQILKGLVYLHSQD-PPIIHRDLKCDNIFVNGNLGEVKIGDLGLATLLRKS----HAKSVIGTPE  209 (632)
T ss_pred             HHhccCCHHHHHHHHHHHHHHhhhhhcCC-CCccccccccceEEEcCCcCceeecchhHHHHhhcc----ccceeccCcc
Confidence            45678889999999999999999999987 569999999999999754 88999999999875432    2233689999


Q ss_pred             cCCcccccCCCcccccceEehhHHHHHHHhcccCCCCcCCCcccccccccCCCccccCccccCCcCHHHHHHHHHHHHHh
Q 041793           81 YMAPEYASDGKFSVKSDVFSFGILLLEIISGKKNRGFYHSDNKLNLIGHVSMPSQLIDPCIQGSFNLVEVIRCIHIGLLC  160 (224)
Q Consensus        81 y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~c  160 (224)
                      |+|||+.. ..|+...||||||++++||+|+.+||.-..  +..++...+.  ....+..+....+    ..+.++|.+|
T Consensus       210 FMAPEmYE-E~YnE~VDVYaFGMCmLEMvT~eYPYsEC~--n~AQIYKKV~--SGiKP~sl~kV~d----Pevr~fIekC  280 (632)
T KOG0584|consen  210 FMAPEMYE-ENYNELVDVYAFGMCMLEMVTSEYPYSECT--NPAQIYKKVT--SGIKPAALSKVKD----PEVREFIEKC  280 (632)
T ss_pred             ccChHHHh-hhcchhhhhhhhhHHHHHHHhccCChhhhC--CHHHHHHHHH--cCCCHHHhhccCC----HHHHHHHHHH
Confidence            99999986 889999999999999999999999986544  2333333222  1111111111112    2356788899


Q ss_pred             ccCCCCCCCChHHHHHH
Q 041793          161 VQQHPKDRPSMPSVILM  177 (224)
Q Consensus       161 l~~dp~~Rps~~~v~~~  177 (224)
                      |.. ...|||+.|+|+-
T Consensus       281 l~~-~~~R~sa~eLL~d  296 (632)
T KOG0584|consen  281 LAT-KSERLSAKELLKD  296 (632)
T ss_pred             hcC-chhccCHHHHhhC
Confidence            999 9999999999873


No 330
>cd06657 STKc_PAK4 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 4. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 4, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK4 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK4 regulates cell mo
Probab=99.92  E-value=2.3e-25  Score=178.99  Aligned_cols=159  Identities=20%  Similarity=0.341  Sum_probs=119.4

Q ss_pred             CCCChHHHHHHHHHHHHHHhhhhcCCCCceEecCCCCCceEECCCCCceEeeecceeecCCCCCCCcccccccccccCCc
Q 041793            5 KILDWPKRFHIICGTARGVMYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDEIEGNTNRVIGTYGYMAP   84 (224)
Q Consensus         5 ~~l~~~~~~~i~~qi~~~l~~Lh~~~~~~i~H~dl~~~nil~~~~~~~kl~df~~~~~~~~~~~~~~~~~~~~~~~y~aP   84 (224)
                      +.+++..++.++.|++.||+|||+.|   ++|+||+|+||+++.++.++++|||++........  ......++..|++|
T Consensus       111 ~~~~~~~~~~~~~ql~~~l~~lH~~g---ivH~dl~p~Nilv~~~~~~~l~dfg~~~~~~~~~~--~~~~~~~~~~y~~p  185 (292)
T cd06657         111 TRMNEEQIAAVCLAVLKALSVLHAQG---VIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVP--RRKSLVGTPYWMAP  185 (292)
T ss_pred             CCCCHHHHHHHHHHHHHHHHHHHHCC---eecCCCCHHHEEECCCCCEEEcccccceecccccc--cccccccCccccCH
Confidence            46789999999999999999999999   99999999999999999999999998876543221  12224567889999


Q ss_pred             ccccCCCcccccceEehhHHHHHHHhcccCCCCcCCCcccccccccCCCccccCccccCCcCHHHHHHHHHHHHHhccCC
Q 041793           85 EYASDGKFSVKSDVFSFGILLLEIISGKKNRGFYHSDNKLNLIGHVSMPSQLIDPCIQGSFNLVEVIRCIHIGLLCVQQH  164 (224)
Q Consensus        85 E~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~d  164 (224)
                      |.+.+..++.++|+||+|++++++++|..||.............. ..+..     ......  ....+.+++.+||+.|
T Consensus       186 E~~~~~~~~~~~Dv~slGvil~el~tg~~p~~~~~~~~~~~~~~~-~~~~~-----~~~~~~--~~~~l~~li~~~l~~~  257 (292)
T cd06657         186 ELISRLPYGPEVDIWSLGIMVIEMVDGEPPYFNEPPLKAMKMIRD-NLPPK-----LKNLHK--VSPSLKGFLDRLLVRD  257 (292)
T ss_pred             HHhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHh-hCCcc-----cCCccc--CCHHHHHHHHHHHhCC
Confidence            998888889999999999999999999999764332211111110 01111     000000  1123567889999999


Q ss_pred             CCCCCChHHHHH
Q 041793          165 PKDRPSMPSVIL  176 (224)
Q Consensus       165 p~~Rps~~~v~~  176 (224)
                      |.+||++.++++
T Consensus       258 P~~R~~~~~ll~  269 (292)
T cd06657         258 PAQRATAAELLK  269 (292)
T ss_pred             cccCcCHHHHhc
Confidence            999999999876


No 331
>cd05577 STKc_GRK Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. GRKs contain a central catalytic domain, flanked by N- and C-terminal extensions. The N-terminus contains an RGS (regulator of 
Probab=99.92  E-value=2.2e-25  Score=177.49  Aligned_cols=156  Identities=26%  Similarity=0.340  Sum_probs=115.7

Q ss_pred             CCCChHHHHHHHHHHHHHHhhhhcCCCCceEecCCCCCceEECCCCCceEeeecceeecCCCCCCCcccccccccccCCc
Q 041793            5 KILDWPKRFHIICGTARGVMYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDEIEGNTNRVIGTYGYMAP   84 (224)
Q Consensus         5 ~~l~~~~~~~i~~qi~~~l~~Lh~~~~~~i~H~dl~~~nil~~~~~~~kl~df~~~~~~~~~~~~~~~~~~~~~~~y~aP   84 (224)
                      ..+++.+++.++.|++.||.|||+.|   ++|+||+|+||+++.++.++|+|||.+.......   ......++..|++|
T Consensus        90 ~~~~~~~~~~~~~ql~~~l~~lH~~~---i~H~di~p~Nil~~~~~~~~l~dfg~~~~~~~~~---~~~~~~~~~~y~~P  163 (277)
T cd05577          90 PGFPEARAIFYAAQIICGLEHLHQRR---IVYRDLKPENVLLDDHGNVRISDLGLAVELKGGK---KIKGRAGTPGYMAP  163 (277)
T ss_pred             CCCCHHHHHHHHHHHHHHHHHHHhCC---cccCCCCHHHEEECCCCCEEEccCcchhhhccCC---ccccccCCCCcCCH
Confidence            36899999999999999999999999   9999999999999999999999999987654321   11223566789999


Q ss_pred             ccccCCCcccccceEehhHHHHHHHhcccCCCCcCCCcccccccccCCCccccCccccCCcCHHHHHHHHHHHHHhccCC
Q 041793           85 EYASDGKFSVKSDVFSFGILLLEIISGKKNRGFYHSDNKLNLIGHVSMPSQLIDPCIQGSFNLVEVIRCIHIGLLCVQQH  164 (224)
Q Consensus        85 E~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~d  164 (224)
                      |.+.+..++.++|+||||++++++++|+.||...........+.......   ........    ...+.+++.+||+.|
T Consensus       164 E~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~---~~~~~~~~----~~~~~~li~~~l~~~  236 (277)
T cd05577         164 EVLQGEVYDFSVDWFALGCTLYEMIAGRSPFRQRKEKVEKEELKRRTLEM---AVEYPDKF----SPEAKDLCEALLQKD  236 (277)
T ss_pred             HHhcCCCCCchhhhHHHHHHHHHHhhCCCCCCCCcccccHHHHHhccccc---cccCCccC----CHHHHHHHHHHccCC
Confidence            99988888999999999999999999999986543311111111110000   00011111    234678889999999


Q ss_pred             CCCCCChHH
Q 041793          165 PKDRPSMPS  173 (224)
Q Consensus       165 p~~Rps~~~  173 (224)
                      |++||++++
T Consensus       237 p~~R~~~~~  245 (277)
T cd05577         237 PEKRLGCRG  245 (277)
T ss_pred             hhHccCCCc
Confidence            999994444


No 332
>cd07879 STKc_p38delta_MAPK13 Catalytic domain of the Serine/Threonine Kinase, p38delta Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), p38delta subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38delta subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38delta, also called MAPK13
Probab=99.92  E-value=1e-25  Score=184.90  Aligned_cols=164  Identities=23%  Similarity=0.297  Sum_probs=117.5

Q ss_pred             CCCChHHHHHHHHHHHHHHhhhhcCCCCceEecCCCCCceEECCCCCceEeeecceeecCCCCCCCcccccccccccCCc
Q 041793            5 KILDWPKRFHIICGTARGVMYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDEIEGNTNRVIGTYGYMAP   84 (224)
Q Consensus         5 ~~l~~~~~~~i~~qi~~~l~~Lh~~~~~~i~H~dl~~~nil~~~~~~~kl~df~~~~~~~~~~~~~~~~~~~~~~~y~aP   84 (224)
                      ..+++..+..++.|++.||.|||+.+   ++||||+|+||+++.++.++|+|||++......     .....++..|+||
T Consensus       112 ~~~~~~~~~~~~~qi~~aL~~LH~~~---i~H~dlkp~NIll~~~~~~kL~dfg~~~~~~~~-----~~~~~~~~~y~aP  183 (342)
T cd07879         112 HPLSEDKVQYLVYQMLCGLKYIHSAG---IIHRDLKPGNLAVNEDCELKILDFGLARHADAE-----MTGYVVTRWYRAP  183 (342)
T ss_pred             CCCCHHHHHHHHHHHHHHHHHHHHCC---cccCCCCHHHEEECCCCCEEEeeCCCCcCCCCC-----CCCceeeecccCh
Confidence            46899999999999999999999999   999999999999999999999999998754221     1223557789999


Q ss_pred             ccccC-CCcccccceEehhHHHHHHHhcccCCCCcCCCccccc-ccccCCC--------------------ccccCcccc
Q 041793           85 EYASD-GKFSVKSDVFSFGILLLEIISGKKNRGFYHSDNKLNL-IGHVSMP--------------------SQLIDPCIQ  142 (224)
Q Consensus        85 E~~~~-~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~-~~~~~~~--------------------~~~~~~~~~  142 (224)
                      |.+.+ ..++.++|+||||+++++|++|+.||........... +.....+                    .........
T Consensus       184 E~~~~~~~~~~~~Dv~slGvil~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  263 (342)
T cd07879         184 EVILNWMHYNQTVDIWSVGCIMAEMLTGKTLFKGKDYLDQLTQILKVTGVPGPEFVQKLEDKAAKSYIKSLPKYPRKDFS  263 (342)
T ss_pred             hhhcCccccCchHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCCCCHHHHHHhcccchHHHHhhcCCcccchHH
Confidence            98866 4578999999999999999999999865321111000 0000000                    000000000


Q ss_pred             CCcCHHHHHHHHHHHHHhccCCCCCCCChHHHHHH
Q 041793          143 GSFNLVEVIRCIHIGLLCVQQHPKDRPSMPSVILM  177 (224)
Q Consensus       143 ~~~~~~~~~~~~~li~~cl~~dp~~Rps~~~v~~~  177 (224)
                      .... .....+.+++.+||+.||++||++.+++..
T Consensus       264 ~~~~-~~~~~~~~li~~~l~~dP~~R~~~~e~l~h  297 (342)
T cd07879         264 TLFP-KASPQAVDLLEKMLELDVDKRLTATEALEH  297 (342)
T ss_pred             HHhc-CCCHHHHHHHHHHcCCChhhCcCHHHHhcC
Confidence            0000 011346789999999999999999999854


No 333
>cd06633 STKc_TAO3 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 3. Serine/threonine kinases (STKs), thousand-and-one amino acids 3 (TAO3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. TAO3 is also known as JIK (JNK inhibitory kinase) or KFC (kinase from chicken). It specifically activates c-Jun N-terminal kinase (JNK), presumably by phosphorylating and activating MKK4/MKK7. In Saccharomyces cerevisiae, TAO3 is a co
Probab=99.92  E-value=2.9e-25  Score=180.03  Aligned_cols=157  Identities=29%  Similarity=0.419  Sum_probs=117.7

Q ss_pred             CCCCCChHHHHHHHHHHHHHHhhhhcCCCCceEecCCCCCceEECCCCCceEeeecceeecCCCCCCCcccccccccccC
Q 041793            3 RCKILDWPKRFHIICGTARGVMYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDEIEGNTNRVIGTYGYM   82 (224)
Q Consensus         3 ~~~~l~~~~~~~i~~qi~~~l~~Lh~~~~~~i~H~dl~~~nil~~~~~~~kl~df~~~~~~~~~~~~~~~~~~~~~~~y~   82 (224)
                      ..+.+++.+++.++.||+.||.|||+.|   ++|+||+|+||+++.++.++++|||++.....      .....++..|+
T Consensus       114 ~~~~l~~~~~~~~~~qi~~al~~LH~~g---i~H~dl~p~nili~~~~~~kL~dfg~~~~~~~------~~~~~~~~~y~  184 (313)
T cd06633         114 HKKPLQEVEIAAITHGALQGLAYLHSHN---MIHRDIKAGNILLTEPGQVKLADFGSASKSSP------ANSFVGTPYWM  184 (313)
T ss_pred             cCCCCCHHHHHHHHHHHHHHHHHHHHCC---eecCCCChhhEEECCCCCEEEeecCCCcccCC------CCCcccccccc
Confidence            3467899999999999999999999999   99999999999999999999999998764321      12345677899


Q ss_pred             Cccccc---CCCcccccceEehhHHHHHHHhcccCCCCcCCCcccccccccCCCccccCccccCCcCHHHHHHHHHHHHH
Q 041793           83 APEYAS---DGKFSVKSDVFSFGILLLEIISGKKNRGFYHSDNKLNLIGHVSMPSQLIDPCIQGSFNLVEVIRCIHIGLL  159 (224)
Q Consensus        83 aPE~~~---~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~  159 (224)
                      |||.+.   ...++.++|+||||+++++|++|..||.................+..     .....+    ..+.+++.+
T Consensus       185 aPE~~~~~~~~~~~~~sDv~slGvil~el~~g~~p~~~~~~~~~~~~~~~~~~~~~-----~~~~~~----~~l~~li~~  255 (313)
T cd06633         185 APEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMSALYHIAQNDSPTL-----QSNEWT----DSFRGFVDY  255 (313)
T ss_pred             ChhhccccCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHhcCCCCC-----CccccC----HHHHHHHHH
Confidence            999874   35578899999999999999999999754332211111111110000     011111    236678899


Q ss_pred             hccCCCCCCCChHHHHHH
Q 041793          160 CVQQHPKDRPSMPSVILM  177 (224)
Q Consensus       160 cl~~dp~~Rps~~~v~~~  177 (224)
                      ||+.+|++||++.+++..
T Consensus       256 ~l~~~P~~Rp~~~~~l~~  273 (313)
T cd06633         256 CLQKIPQERPASAELLRH  273 (313)
T ss_pred             HccCChhhCcCHHHHhcC
Confidence            999999999999999754


No 334
>cd07835 STKc_CDK1_like Catalytic domain of Cyclin-Dependent protein Kinase 1-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 1 (CDK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK1 from higher eukaryotes, plants, and yeasts, as well as CDK2 and CDK3. CDK1 is also called Cell division control protein 2 (Cdc2) or p34 protein kinase, and is regulated by cyclins A, B, and E. The CDK1/cyc
Probab=99.92  E-value=9.7e-26  Score=179.92  Aligned_cols=166  Identities=23%  Similarity=0.302  Sum_probs=116.6

Q ss_pred             CCCChHHHHHHHHHHHHHHhhhhcCCCCceEecCCCCCceEECCCCCceEeeecceeecCCCCCCCcccccccccccCCc
Q 041793            5 KILDWPKRFHIICGTARGVMYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDEIEGNTNRVIGTYGYMAP   84 (224)
Q Consensus         5 ~~l~~~~~~~i~~qi~~~l~~Lh~~~~~~i~H~dl~~~nil~~~~~~~kl~df~~~~~~~~~~~~~~~~~~~~~~~y~aP   84 (224)
                      ..+++.+++.++.|++.||.|||+.+   ++|+||+|+||+++.++.++|+|||++........  ......++..|+||
T Consensus        94 ~~~~~~~~~~~~~~i~~~L~~lH~~~---~~H~dl~p~nil~~~~~~~~l~df~~~~~~~~~~~--~~~~~~~~~~~~aP  168 (283)
T cd07835          94 TGLDPPLIKSYLYQLLQGIAYCHSHR---VLHRDLKPQNLLIDREGALKLADFGLARAFGVPVR--TYTHEVVTLWYRAP  168 (283)
T ss_pred             CCCCHHHHHHHHHHHHHHHHHHHHCC---eeCCCCCHHHEEEcCCCcEEEeecccccccCCCcc--ccCccccccCCCCC
Confidence            36899999999999999999999999   99999999999999999999999999875432211  11222456789999


Q ss_pred             ccccCC-CcccccceEehhHHHHHHHhcccCCCCcCCCcccc-cccccCCC---------------ccccC---ccccCC
Q 041793           85 EYASDG-KFSVKSDVFSFGILLLEIISGKKNRGFYHSDNKLN-LIGHVSMP---------------SQLID---PCIQGS  144 (224)
Q Consensus        85 E~~~~~-~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~-~~~~~~~~---------------~~~~~---~~~~~~  144 (224)
                      |.+.+. .++.++|+||||+++|++++|+.||.......... .......+               .....   ..... 
T Consensus       169 E~~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-  247 (283)
T cd07835         169 EILLGSRQYSTPVDIWSIGCIFAEMVNRRPLFPGDSEIDQLFRIFRTLGTPDEDVWPGVTSLPDYKPTFPKWARQDLSK-  247 (283)
T ss_pred             ceeecCcccCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCChHHhhhhhhchhhhhhcccccccchhh-
Confidence            987654 46889999999999999999999985432211100 00000000               00000   00000 


Q ss_pred             cCHHHHHHHHHHHHHhccCCCCCCCChHHHHH
Q 041793          145 FNLVEVIRCIHIGLLCVQQHPKDRPSMPSVIL  176 (224)
Q Consensus       145 ~~~~~~~~~~~li~~cl~~dp~~Rps~~~v~~  176 (224)
                      ........+.+++.+||+.||++||+++++++
T Consensus       248 ~~~~~~~~~~~li~~~l~~~P~~Rpt~~~il~  279 (283)
T cd07835         248 VVPNLDEDGLDLLSKMLVYDPAKRISAKAALQ  279 (283)
T ss_pred             hcCCCCHHHHHHHHHHhcCChhhCcCHHHHhc
Confidence            00000134678999999999999999999974


No 335
>cd07830 STKc_MAK_like Catalytic domain of Male germ cell-Associated Kinase-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Male germ cell-Associated Kinase (MAK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of human MAK and MAK-related kinase (MRK), Saccharomyces cerevisiae Ime2p, Schizosaccharomyces pombe Mei4-dependent protein 3 (Mde3) and Pit1, Caenorhabditis elegans dyf-5, Arabidopsis thaliana MHK, and similar proteins. These proteins play important roles during meiosis. MAK is highly expressed in testicular cells specifically in the meiotic phase, but is not essential for spermatogenesis and fertili
Probab=99.92  E-value=4.3e-25  Score=176.12  Aligned_cols=166  Identities=23%  Similarity=0.243  Sum_probs=117.9

Q ss_pred             CCCChHHHHHHHHHHHHHHhhhhcCCCCceEecCCCCCceEECCCCCceEeeecceeecCCCCCCCcccccccccccCCc
Q 041793            5 KILDWPKRFHIICGTARGVMYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDEIEGNTNRVIGTYGYMAP   84 (224)
Q Consensus         5 ~~l~~~~~~~i~~qi~~~l~~Lh~~~~~~i~H~dl~~~nil~~~~~~~kl~df~~~~~~~~~~~~~~~~~~~~~~~y~aP   84 (224)
                      ..+++.+++.++.|++.||.|||+.+   ++|+||+|.||+++.++.++|+|||.+........   .....++..|+||
T Consensus        94 ~~~~~~~~~~~~~~l~~~l~~Lh~~~---i~H~dl~~~ni~i~~~~~~~l~d~~~~~~~~~~~~---~~~~~~~~~~~aP  167 (283)
T cd07830          94 KPFSESVIRSIIYQILQGLAHIHKHG---FFHRDLKPENLLVSGPEVVKIADFGLAREIRSRPP---YTDYVSTRWYRAP  167 (283)
T ss_pred             ccCCHHHHHHHHHHHHHHHHHHHHCC---cccCCCChhhEEEcCCCCEEEeecccceeccCCCC---cCCCCCcccccCc
Confidence            47899999999999999999999999   99999999999999999999999999986543221   1223567789999


Q ss_pred             ccccC-CCcccccceEehhHHHHHHHhcccCCCCcCCCcccccccc----------------cCCCccccCccccCCc--
Q 041793           85 EYASD-GKFSVKSDVFSFGILLLEIISGKKNRGFYHSDNKLNLIGH----------------VSMPSQLIDPCIQGSF--  145 (224)
Q Consensus        85 E~~~~-~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~----------------~~~~~~~~~~~~~~~~--  145 (224)
                      |.+.. ..++.++|+||||++++++++|+.||......+.......                ................  
T Consensus       168 E~~~~~~~~~~~~Di~s~G~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  247 (283)
T cd07830         168 EILLRSTSYSSPVDIWALGCIMAELYTLRPLFPGSSEIDQLYKICSVLGTPTKQDWPEGYKLASKLGFRFPQFAPTSLHQ  247 (283)
T ss_pred             eeeecCcCcCCccchhhHHHHHHHHHhCCCccCCCChHHHHHHHHHhcCCCChhhhhhHhhhhccccccccccccccHHH
Confidence            98754 4578999999999999999999998854332111100000                0000000000000000  


Q ss_pred             -CHHHHHHHHHHHHHhccCCCCCCCChHHHHH
Q 041793          146 -NLVEVIRCIHIGLLCVQQHPKDRPSMPSVIL  176 (224)
Q Consensus       146 -~~~~~~~~~~li~~cl~~dp~~Rps~~~v~~  176 (224)
                       -......+.+++.+||+.||++||+++|++.
T Consensus       248 ~~~~~~~~~~~li~~cl~~~p~~Rpt~~ei~~  279 (283)
T cd07830         248 LIPNASPEAIDLIKDMLRWDPKKRPTASQALQ  279 (283)
T ss_pred             HcccCCHHHHHHHHHhcccCcccCCCHHHHhh
Confidence             0001245778999999999999999999865


No 336
>KOG0032 consensus Ca2+/calmodulin-dependent protein kinase, EF-Hand protein superfamily [Signal transduction mechanisms]
Probab=99.92  E-value=3e-25  Score=182.65  Aligned_cols=158  Identities=23%  Similarity=0.263  Sum_probs=124.6

Q ss_pred             CChHHHHHHHHHHHHHHhhhhcCCCCceEecCCCCCceEECC----CCCceEeeecceeecCCCCCCCcccccccccccC
Q 041793            7 LDWPKRFHIICGTARGVMYLHQDSRLRIIHRDLKASNVLLDQ----DMNPKISDFGLARAFGGDEIEGNTNRVIGTYGYM   82 (224)
Q Consensus         7 l~~~~~~~i~~qi~~~l~~Lh~~~~~~i~H~dl~~~nil~~~----~~~~kl~df~~~~~~~~~~~~~~~~~~~~~~~y~   82 (224)
                      +++.....++.||+.|++|||+.|   |+|||+||+|+++..    ++.++++|||++.....   ........|++.|+
T Consensus       132 ~sE~da~~~~~~il~av~~lH~~g---vvHrDlKpEN~L~~~~~~~~~~ik~~DFGla~~~~~---~~~~~~~~Gtp~y~  205 (382)
T KOG0032|consen  132 YSERDAAGIIRQILEAVKYLHSLG---VVHRDLKPENLLLASKDEGSGRIKLIDFGLAKFIKP---GERLHTIVGTPEYV  205 (382)
T ss_pred             CCHHHHHHHHHHHHHHHHHHHhCC---ceeccCCHHHeeeccccCCCCcEEEeeCCCceEccC---CceEeeecCCcccc
Confidence            889999999999999999999999   999999999999963    35799999999998754   22345578999999


Q ss_pred             CcccccCCCcccccceEehhHHHHHHHhcccCCCCcCCCcccccccccCCCccccCccccCCcCHHHHHHHHHHHHHhcc
Q 041793           83 APEYASDGKFSVKSDVFSFGILLLEIISGKKNRGFYHSDNKLNLIGHVSMPSQLIDPCIQGSFNLVEVIRCIHIGLLCVQ  162 (224)
Q Consensus        83 aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~  162 (224)
                      |||.+.+..++..+||||+|+++|.|++|..||...........+.....  ....+.+.   +  ....+.+++..|+.
T Consensus       206 APEvl~~~~y~~~~DiWS~Gvi~yiLL~G~~PF~~~~~~~~~~~i~~~~~--~f~~~~w~---~--is~~akd~i~~ll~  278 (382)
T KOG0032|consen  206 APEVLGGRPYGDEVDVWSIGVILYILLSGVPPFWGETEFEIFLAILRGDF--DFTSEPWD---D--ISESAKDFIRKLLE  278 (382)
T ss_pred             CchhhcCCCCCcccchhHHHHHHHHHhhCCCCCcCCChhHHHHHHHcCCC--CCCCCCcc---c--cCHHHHHHHHHhcc
Confidence            99999989999999999999999999999999866553333322221111  11111111   1  12345688889999


Q ss_pred             CCCCCCCChHHHHHH
Q 041793          163 QHPKDRPSMPSVILM  177 (224)
Q Consensus       163 ~dp~~Rps~~~v~~~  177 (224)
                      .||.+|+++.++++.
T Consensus       279 ~dp~~R~ta~~~L~H  293 (382)
T KOG0032|consen  279 FDPRKRLTAAQALQH  293 (382)
T ss_pred             cCcccCCCHHHHhcC
Confidence            999999999999883


No 337
>cd05580 STKc_PKA Catalytic domain of the Protein Serine/Threonine Kinase, cAMP-dependent protein kinase. Serine/Threonine Kinases (STKs), cAMP-dependent protein kinase (PKA) subfamily, catalytic (c) subunit. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKA subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This subfamily is composed of the cAMP-dependent proteins kinases, PKA and PRKX. The inactive PKA holoenzyme is a heterotetramer composed of two phosphorylated and active catalytic (C) subunits with a dimer of regulatory (R) subunits. Activation is achieved through the binding of the important second messenger cAMP to the R subunits, which leads to the dissociation of PKA into the R dimer and two active C subunits. PKA is present ubi
Probab=99.92  E-value=2.9e-25  Score=178.07  Aligned_cols=154  Identities=24%  Similarity=0.265  Sum_probs=118.8

Q ss_pred             CCCCChHHHHHHHHHHHHHHhhhhcCCCCceEecCCCCCceEECCCCCceEeeecceeecCCCCCCCcccccccccccCC
Q 041793            4 CKILDWPKRFHIICGTARGVMYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDEIEGNTNRVIGTYGYMA   83 (224)
Q Consensus         4 ~~~l~~~~~~~i~~qi~~~l~~Lh~~~~~~i~H~dl~~~nil~~~~~~~kl~df~~~~~~~~~~~~~~~~~~~~~~~y~a   83 (224)
                      .+.+++..+..++.||+.||.|||+.|   ++|+||+|.||+++.++.++|+|||++......     .....++..|++
T Consensus        95 ~~~l~~~~~~~~~~qil~~l~~lH~~~---i~H~dl~p~nili~~~~~~kl~dfg~~~~~~~~-----~~~~~~~~~y~a  166 (290)
T cd05580          95 SGRFPEPVARFYAAQVVLALEYLHSLD---IVYRDLKPENLLLDSDGYIKITDFGFAKRVKGR-----TYTLCGTPEYLA  166 (290)
T ss_pred             cCCCCHHHHHHHHHHHHHHHHHHHHCC---EecCCCCHHHEEECCCCCEEEeeCCCccccCCC-----CCCCCCCccccC
Confidence            467899999999999999999999999   999999999999999999999999998765433     222356788999


Q ss_pred             cccccCCCcccccceEehhHHHHHHHhcccCCCCcCCCcccccccccCCCccccCccccCCcCHHHHHHHHHHHHHhccC
Q 041793           84 PEYASDGKFSVKSDVFSFGILLLEIISGKKNRGFYHSDNKLNLIGHVSMPSQLIDPCIQGSFNLVEVIRCIHIGLLCVQQ  163 (224)
Q Consensus        84 PE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~  163 (224)
                      ||.+.+...+.++|+||||+++++|++|+.||..........   .......    ......    ...+.+++.+||+.
T Consensus       167 PE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~---~~~~~~~----~~~~~~----~~~l~~li~~~l~~  235 (290)
T cd05580         167 PEIILSKGYGKAVDWWALGILIYEMLAGYPPFFDDNPIQIYE---KILEGKV----RFPSFF----SPDAKDLIRNLLQV  235 (290)
T ss_pred             hhhhcCCCCCccccHHHHHHHHHHHHhCCCCCCCCCHHHHHH---HHhcCCc----cCCccC----CHHHHHHHHHHccC
Confidence            999988888899999999999999999999985433211111   1110000    011111    23567888999999


Q ss_pred             CCCCCC-----ChHHHHH
Q 041793          164 HPKDRP-----SMPSVIL  176 (224)
Q Consensus       164 dp~~Rp-----s~~~v~~  176 (224)
                      ||++|+     +++++++
T Consensus       236 ~p~~R~~~~~~~~~~l~~  253 (290)
T cd05580         236 DLTKRLGNLKNGVNDIKN  253 (290)
T ss_pred             CHHHccCcccCCHHHHHc
Confidence            999999     7777764


No 338
>KOG0579 consensus Ste20-like serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.92  E-value=1.7e-25  Score=187.38  Aligned_cols=160  Identities=24%  Similarity=0.386  Sum_probs=122.3

Q ss_pred             CCCCChHHHHHHHHHHHHHHhhhhcCCCCceEecCCCCCceEECCCCCceEeeecceeecCCCCCCCcccccccccccCC
Q 041793            4 CKILDWPKRFHIICGTARGVMYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDEIEGNTNRVIGTYGYMA   83 (224)
Q Consensus         4 ~~~l~~~~~~~i~~qi~~~l~~Lh~~~~~~i~H~dl~~~nil~~~~~~~kl~df~~~~~~~~~~~~~~~~~~~~~~~y~a   83 (224)
                      ++.|++.++..+++|+++||.|||+++   |+|||||+-|||+..+|.++|+|||++-....  ....-..+.|++.|+|
T Consensus       124 ~r~LtE~QIqvvc~q~ldALn~LHs~~---iIHRDLKAGNiL~TldGdirLADFGVSAKn~~--t~qkRDsFIGTPYWMA  198 (1187)
T KOG0579|consen  124 GRVLTEDQIQVVCYQVLDALNWLHSQN---IIHRDLKAGNILLTLDGDIRLADFGVSAKNKS--TRQKRDSFIGTPYWMA  198 (1187)
T ss_pred             ccccchHHHHHHHHHHHHHHHHHhhcc---hhhhhccccceEEEecCcEeeecccccccchh--HHhhhccccCCccccc
Confidence            578999999999999999999999999   99999999999999999999999999765321  1112234789999999


Q ss_pred             cccc-----cCCCcccccceEehhHHHHHHHhcccCCCCcCCCcccccccccCCCccccCccccCCcCHHHHHHHHHHHH
Q 041793           84 PEYA-----SDGKFSVKSDVFSFGILLLEIISGKKNRGFYHSDNKLNLIGHVSMPSQLIDPCIQGSFNLVEVIRCIHIGL  158 (224)
Q Consensus        84 PE~~-----~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~  158 (224)
                      ||+.     +..+|+.++||||||+.+.+|..+.+|.+...   ....+-.+....  ++.-+.+..+..   .+.+++.
T Consensus       199 PEVvmCET~KD~PYDykaDiWSlGITLIEMAqiEPPHheln---pMRVllKiaKSe--PPTLlqPS~Ws~---~F~DfLk  270 (1187)
T KOG0579|consen  199 PEVVMCETFKDQPYDYKADIWSLGITLIEMAQIEPPHHELN---PMRVLLKIAKSE--PPTLLQPSHWSR---SFSDFLK  270 (1187)
T ss_pred             chheeeccccCCCchhhhhHHhhhhHHHHHhccCCCccccc---hHHHHHHHhhcC--CCcccCcchhhh---HHHHHHH
Confidence            9976     45679999999999999999999999954433   333222222111  111122222322   3556778


Q ss_pred             HhccCCCCCCCChHHHHH
Q 041793          159 LCVQQHPKDRPSMPSVIL  176 (224)
Q Consensus       159 ~cl~~dp~~Rps~~~v~~  176 (224)
                      +||..||..||++.++++
T Consensus       271 ~cL~Knp~~Rp~aaqll~  288 (1187)
T KOG0579|consen  271 RCLVKNPRNRPPAAQLLK  288 (1187)
T ss_pred             HHHhcCCccCCCHHHHhh
Confidence            999999999999999987


No 339
>cd06627 STKc_Cdc7_like Catalytic domain of Cell division control protein 7-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs),  (Cdc7)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Cdc7-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include Schizosaccharomyces pombe Cdc7, Saccharomyces cerevisiae Cdc15, Arabidopsis thaliana mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) epsilon, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Fission yeast 
Probab=99.92  E-value=3.8e-25  Score=173.40  Aligned_cols=157  Identities=25%  Similarity=0.368  Sum_probs=120.6

Q ss_pred             CCCChHHHHHHHHHHHHHHhhhhcCCCCceEecCCCCCceEECCCCCceEeeecceeecCCCCCCCcccccccccccCCc
Q 041793            5 KILDWPKRFHIICGTARGVMYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDEIEGNTNRVIGTYGYMAP   84 (224)
Q Consensus         5 ~~l~~~~~~~i~~qi~~~l~~Lh~~~~~~i~H~dl~~~nil~~~~~~~kl~df~~~~~~~~~~~~~~~~~~~~~~~y~aP   84 (224)
                      +.+++..++.++.|++.||.|||+.|   ++|+||+|.||+++.++.++++|||.+.........  .....++..|++|
T Consensus        94 ~~l~~~~~~~~~~~i~~~l~~lH~~~---i~H~dl~p~ni~i~~~~~~~l~d~~~~~~~~~~~~~--~~~~~~~~~y~~p  168 (254)
T cd06627          94 GPFPESLVAVYVYQVLQGLAYLHEQG---VIHRDIKAANILTTKDGVVKLADFGVATKLNDVSKD--DASVVGTPYWMAP  168 (254)
T ss_pred             cCCCHHHHHHHHHHHHHHHHHHhhCC---cccCCCCHHHEEECCCCCEEEeccccceecCCCccc--ccccccchhhcCH
Confidence            57899999999999999999999999   999999999999999999999999999876543221  1224567789999


Q ss_pred             ccccCCCcccccceEehhHHHHHHHhcccCCCCcCCCcccccccccCCCccccCccccCCcCHHHHHHHHHHHHHhccCC
Q 041793           85 EYASDGKFSVKSDVFSFGILLLEIISGKKNRGFYHSDNKLNLIGHVSMPSQLIDPCIQGSFNLVEVIRCIHIGLLCVQQH  164 (224)
Q Consensus        85 E~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~d  164 (224)
                      |.+.+..++.++|+|++|++++++++|..||................  .    .......    ...+.+++.+||..+
T Consensus       169 e~~~~~~~~~~~Dv~~lG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~--~----~~~~~~~----~~~~~~~i~~~l~~~  238 (254)
T cd06627         169 EVIEMSGASTASDIWSLGCTVIELLTGNPPYYDLNPMAALFRIVQDD--H----PPLPEGI----SPELKDFLMQCFQKD  238 (254)
T ss_pred             hhhcCCCCCcchhHHHHHHHHHHHHhCCCCCCCccHHHHHHHHhccC--C----CCCCCCC----CHHHHHHHHHHHhCC
Confidence            99988778899999999999999999999986433211111111000  0    0111111    134668889999999


Q ss_pred             CCCCCChHHHHH
Q 041793          165 PKDRPSMPSVIL  176 (224)
Q Consensus       165 p~~Rps~~~v~~  176 (224)
                      |++||++.+++.
T Consensus       239 p~~R~~~~~~l~  250 (254)
T cd06627         239 PNLRPTAKQLLK  250 (254)
T ss_pred             hhhCcCHHHHhc
Confidence            999999999874


No 340
>KOG4645 consensus MAPKKK (MAP kinase kinase kinase) SSK2 and related serine/threonine protein kinases [Signal transduction mechanisms]
Probab=99.92  E-value=2.8e-26  Score=203.83  Aligned_cols=163  Identities=27%  Similarity=0.357  Sum_probs=122.9

Q ss_pred             CCCCChHHHHHHHHHHHHHHhhhhcCCCCceEecCCCCCceEECCCCCceEeeecceeecCCCC--CCCccccccccccc
Q 041793            4 CKILDWPKRFHIICGTARGVMYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDE--IEGNTNRVIGTYGY   81 (224)
Q Consensus         4 ~~~l~~~~~~~i~~qi~~~l~~Lh~~~~~~i~H~dl~~~nil~~~~~~~kl~df~~~~~~~~~~--~~~~~~~~~~~~~y   81 (224)
                      ++.+++.-...+-.|++.|+.|||+.|   |+||||||.||+++.+|.+|++|||.|....+..  .........||+.|
T Consensus      1328 gri~dE~vt~vyt~qll~gla~LH~~g---IVHRDIK~aNI~Ld~~g~iK~~DFGsa~ki~~~~~~~~~el~~~~GT~~Y 1404 (1509)
T KOG4645|consen 1328 GRIEDEMVTRVYTKQLLEGLAYLHEHG---IVHRDIKPANILLDFNGLIKYGDFGSAVKIKNNAQTMPGELQSMMGTPMY 1404 (1509)
T ss_pred             cchhhhhHHHHHHHHHHHHHHHHHhcC---ceecCCCccceeeecCCcEEeecccceeEecCchhcCCHHHHhhcCCchh
Confidence            344555556667899999999999999   9999999999999999999999999999886643  22233446899999


Q ss_pred             CCcccccCC---CcccccceEehhHHHHHHHhcccCCCCcCCCcccccccccCCCccccCccccCCcCHHHHHHHHHHHH
Q 041793           82 MAPEYASDG---KFSVKSDVFSFGILLLEIISGKKNRGFYHSDNKLNLIGHVSMPSQLIDPCIQGSFNLVEVIRCIHIGL  158 (224)
Q Consensus        82 ~aPE~~~~~---~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~  158 (224)
                      +|||++-+.   +-..++||||||||+.||++|+.||..++  +...++-++.+.....-|.   .    -...-.+++.
T Consensus      1405 MAPEvit~t~~kG~~~A~DiWslGCVVlEM~tGkrPW~~~d--ne~aIMy~V~~gh~Pq~P~---~----ls~~g~dFle 1475 (1509)
T KOG4645|consen 1405 MAPEVITGTKGKGHGGAADIWSLGCVVLEMATGKRPWAELD--NEWAIMYHVAAGHKPQIPE---R----LSSEGRDFLE 1475 (1509)
T ss_pred             cCchhhcccccCCCCcchhhhcccceEEEeecCCCchhhcc--chhHHHhHHhccCCCCCch---h----hhHhHHHHHH
Confidence            999998653   34588999999999999999999986654  3334444444333211111   0    1123456777


Q ss_pred             HhccCCCCCCCChHHHHHHh
Q 041793          159 LCVQQHPKDRPSMPSVILML  178 (224)
Q Consensus       159 ~cl~~dp~~Rps~~~v~~~L  178 (224)
                      .||+.||++|.++.|+++.-
T Consensus      1476 ~Cl~~dP~~Rw~~~qlle~~ 1495 (1509)
T KOG4645|consen 1476 HCLEQDPKMRWTASQLLEHA 1495 (1509)
T ss_pred             HHHhcCchhhhHHHHHHHhh
Confidence            99999999999998886653


No 341
>cd07864 STKc_CDK12 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 12. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 12 (CDK12) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK12 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK12 is also called Cdc2-related protein kinase 7 (CRK7) or Cdc2-related kinase arginine/serine-rich (CrkRS). It is a unique CDK that contains an arginine/serine-rich (RS) domain, which is predominantly found in splicing factors. CDK12 is widely
Probab=99.92  E-value=2.2e-25  Score=179.44  Aligned_cols=168  Identities=23%  Similarity=0.339  Sum_probs=117.7

Q ss_pred             CCCCChHHHHHHHHHHHHHHhhhhcCCCCceEecCCCCCceEECCCCCceEeeecceeecCCCCCCCcccccccccccCC
Q 041793            4 CKILDWPKRFHIICGTARGVMYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDEIEGNTNRVIGTYGYMA   83 (224)
Q Consensus         4 ~~~l~~~~~~~i~~qi~~~l~~Lh~~~~~~i~H~dl~~~nil~~~~~~~kl~df~~~~~~~~~~~~~~~~~~~~~~~y~a   83 (224)
                      ...+++.+++.++.||+.||.|||+.|   |+|+||+|+||+++.++.++++|||++......... ......++..|++
T Consensus       110 ~~~~~~~~~~~i~~qi~~aL~~LH~~~---i~H~dl~p~nili~~~~~~kl~dfg~~~~~~~~~~~-~~~~~~~~~~y~~  185 (302)
T cd07864         110 LVHFSEDHIKSFMKQLLEGLNYCHKKN---FLHRDIKCSNILLNNKGQIKLADFGLARLYNSEESR-PYTNKVITLWYRP  185 (302)
T ss_pred             CCCCCHHHHHHHHHHHHHHHHHHHhCC---eecCCCCHHHEEECCCCcEEeCcccccccccCCccc-ccccceeccCccC
Confidence            346899999999999999999999999   999999999999999999999999998765432211 1111234668999


Q ss_pred             cccccCC-CcccccceEehhHHHHHHHhcccCCCCcCCCccccccccc-CCCc--c------c-----cCc------ccc
Q 041793           84 PEYASDG-KFSVKSDVFSFGILLLEIISGKKNRGFYHSDNKLNLIGHV-SMPS--Q------L-----IDP------CIQ  142 (224)
Q Consensus        84 PE~~~~~-~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~-~~~~--~------~-----~~~------~~~  142 (224)
                      ||.+.+. .++.++|+||||++++++++|+.||...........+... ..+.  .      .     .+.      ...
T Consensus       186 PE~~~~~~~~~~~~Di~slG~~~~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  265 (302)
T cd07864         186 PELLLGEERYGPAIDVWSCGCILGELFTKKPIFQANQELAQLELISRLCGSPCPAVWPDVIKLPYFNTMKPKKQYRRRLR  265 (302)
T ss_pred             hHHhcCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCChhhcccccccccccccccccccccchh
Confidence            9987653 4688999999999999999999998643221111111000 0000  0      0     000      000


Q ss_pred             CCcCHHHHHHHHHHHHHhccCCCCCCCChHHHHH
Q 041793          143 GSFNLVEVIRCIHIGLLCVQQHPKDRPSMPSVIL  176 (224)
Q Consensus       143 ~~~~~~~~~~~~~li~~cl~~dp~~Rps~~~v~~  176 (224)
                      ..... ....+.+++.+||+.||++||++++++.
T Consensus       266 ~~~~~-~~~~~~~li~~~l~~~P~~Rp~~~~il~  298 (302)
T cd07864         266 EEFSF-IPTPALDLLDHMLTLDPSKRCTAEEALN  298 (302)
T ss_pred             hhcCC-CCHHHHHHHHHHccCChhhCCCHHHHhc
Confidence            00000 0235778999999999999999999875


No 342
>cd06641 STKc_MST3 Catalytic domain of the Protein Serine/Threonine Kinase, Mammalian Ste20-like protein kinase 3. Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 3 (MST3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MST3 phosphorylates the STK NDR and may play a role in cell cycle progression and cell morphology. It may also regulate paxillin and consequently, cell migration. MST3 is present in human placenta, where it plays an essential role in the oxidative stress-induced apoptosis of trophoblasts in normal spontaneous delivery. Dysregulation of trophoblast apoptosis may result in pregnancy complications such as preeclampsia and int
Probab=99.92  E-value=4.3e-25  Score=175.89  Aligned_cols=158  Identities=30%  Similarity=0.485  Sum_probs=120.7

Q ss_pred             CCCChHHHHHHHHHHHHHHhhhhcCCCCceEecCCCCCceEECCCCCceEeeecceeecCCCCCCCcccccccccccCCc
Q 041793            5 KILDWPKRFHIICGTARGVMYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDEIEGNTNRVIGTYGYMAP   84 (224)
Q Consensus         5 ~~l~~~~~~~i~~qi~~~l~~Lh~~~~~~i~H~dl~~~nil~~~~~~~kl~df~~~~~~~~~~~~~~~~~~~~~~~y~aP   84 (224)
                      ..+++..+..++.|++.|+.|||+.|   ++|+||+|.||+++.++.++++|||++........  ......++..|++|
T Consensus        96 ~~~~~~~~~~~~~~l~~~l~~lh~~~---i~h~dl~p~Ni~i~~~~~~~l~dfg~~~~~~~~~~--~~~~~~~~~~y~~P  170 (277)
T cd06641          96 GPLDETQIATILREILKGLDYLHSEK---KIHRDIKAANVLLSEHGEVKLADFGVAGQLTDTQI--KRNTFVGTPFWMAP  170 (277)
T ss_pred             CCCCHHHHHHHHHHHHHHHHHHccCC---eecCCCCHHhEEECCCCCEEEeecccceecccchh--hhccccCCccccCh
Confidence            56899999999999999999999999   99999999999999999999999999876543211  11223567789999


Q ss_pred             ccccCCCcccccceEehhHHHHHHHhcccCCCCcCCCcccccccccCCCccccCccccCCcCHHHHHHHHHHHHHhccCC
Q 041793           85 EYASDGKFSVKSDVFSFGILLLEIISGKKNRGFYHSDNKLNLIGHVSMPSQLIDPCIQGSFNLVEVIRCIHIGLLCVQQH  164 (224)
Q Consensus        85 E~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~d  164 (224)
                      |.+.+..++.++|+||||++++++++|..||...........+....      .+......    ...+.+++.+||+.+
T Consensus       171 E~~~~~~~~~~~Dv~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~------~~~~~~~~----~~~~~~~i~~~l~~~  240 (277)
T cd06641         171 EVIKQSAYDSKADIWSLGITAIELAKGEPPHSELHPMKVLFLIPKNN------PPTLEGNY----SKPLKEFVEACLNKE  240 (277)
T ss_pred             hhhccCCCCchhhHHHHHHHHHHHHcCCCCCCccchHHHHHHHhcCC------CCCCCccc----CHHHHHHHHHHccCC
Confidence            99988888999999999999999999999975433221111111000      00111111    234667889999999


Q ss_pred             CCCCCChHHHHHH
Q 041793          165 PKDRPSMPSVILM  177 (224)
Q Consensus       165 p~~Rps~~~v~~~  177 (224)
                      |++||++.++++.
T Consensus       241 p~~Rp~~~~~l~~  253 (277)
T cd06641         241 PSFRPTAKELLKH  253 (277)
T ss_pred             hhhCcCHHHHHhC
Confidence            9999999999884


No 343
>cd07829 STKc_CDK_like Catalytic domain of Cyclin-Dependent protein Kinase-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase (CDK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKs are partly regulated by their subcellular localization, which defines substrate phosphorylation and the resulting specific function. CDK1, CDK2, CDK4, and CDK6 have well-defined functions in the cell cycle, such as the regulation of the 
Probab=99.92  E-value=3.8e-25  Score=176.18  Aligned_cols=167  Identities=27%  Similarity=0.282  Sum_probs=118.2

Q ss_pred             CCCChHHHHHHHHHHHHHHhhhhcCCCCceEecCCCCCceEECCCCCceEeeecceeecCCCCCCCcccccccccccCCc
Q 041793            5 KILDWPKRFHIICGTARGVMYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDEIEGNTNRVIGTYGYMAP   84 (224)
Q Consensus         5 ~~l~~~~~~~i~~qi~~~l~~Lh~~~~~~i~H~dl~~~nil~~~~~~~kl~df~~~~~~~~~~~~~~~~~~~~~~~y~aP   84 (224)
                      ..+++.+++.++.|++.||.|||+.+   ++|+||+|+||+++.++.++++|||++........  .......+..|+||
T Consensus        93 ~~~~~~~~~~~~~~i~~~l~~LH~~~---i~H~~l~~~ni~~~~~~~~~l~d~g~~~~~~~~~~--~~~~~~~~~~~~aP  167 (282)
T cd07829          93 GPLSPNLIKSIMYQLLRGLAYCHSHR---ILHRDLKPQNILINRDGVLKLADFGLARAFGIPLR--TYTHEVVTLWYRAP  167 (282)
T ss_pred             cCCCHHHHHHHHHHHHHHHHHHHHCC---cccCCCChheEEEcCCCCEEEecCCcccccCCCcc--ccCccccCcCcCCh
Confidence            47899999999999999999999999   99999999999999999999999999876543221  11122345679999


Q ss_pred             ccccCC-CcccccceEehhHHHHHHHhcccCCCCcCCCcccccc-ccc------------CC--CccccCccccCCc---
Q 041793           85 EYASDG-KFSVKSDVFSFGILLLEIISGKKNRGFYHSDNKLNLI-GHV------------SM--PSQLIDPCIQGSF---  145 (224)
Q Consensus        85 E~~~~~-~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~-~~~------------~~--~~~~~~~~~~~~~---  145 (224)
                      |.+.+. .++.++|+||||++++++++|..||...........+ ...            ..  .............   
T Consensus       168 E~~~~~~~~~~~~Dv~slG~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  247 (282)
T cd07829         168 EILLGSKHYSTAVDIWSVGCIFAEMITGKPLFPGDSEIDQLFKIFQILGTPTEESWPGVTKLPDYKPTFPKFPPKDLEKV  247 (282)
T ss_pred             HHhcCCcCCCccccHHHHHHHHHHHHhCCCCCCCccHHHHHHHHHHHhCCCcHHHHHhhcccccccccccccCccchHHh
Confidence            998766 7789999999999999999999887543211110000 000            00  0000000000000   


Q ss_pred             CHHHHHHHHHHHHHhccCCCCCCCChHHHHH
Q 041793          146 NLVEVIRCIHIGLLCVQQHPKDRPSMPSVIL  176 (224)
Q Consensus       146 ~~~~~~~~~~li~~cl~~dp~~Rps~~~v~~  176 (224)
                      -......+.+++.+||..||++||++++++.
T Consensus       248 ~~~~~~~~~~~i~~~l~~~P~~Rp~~~~~l~  278 (282)
T cd07829         248 LPRLDPEGIDLLSKMLQYNPAKRISAKEALK  278 (282)
T ss_pred             cccccHHHHHHHHHhhccCcccCCCHHHHhh
Confidence            0001245788999999999999999999975


No 344
>cd05583 STKc_MSK_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase. Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, in response to various stimuli such as growth factors, hormones, neurotransmitters, cellular stress, and pro-inflammatory cytokines
Probab=99.92  E-value=6.4e-25  Score=175.75  Aligned_cols=166  Identities=24%  Similarity=0.313  Sum_probs=121.7

Q ss_pred             CCCCChHHHHHHHHHHHHHHhhhhcCCCCceEecCCCCCceEECCCCCceEeeecceeecCCCCCCCcccccccccccCC
Q 041793            4 CKILDWPKRFHIICGTARGVMYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDEIEGNTNRVIGTYGYMA   83 (224)
Q Consensus         4 ~~~l~~~~~~~i~~qi~~~l~~Lh~~~~~~i~H~dl~~~nil~~~~~~~kl~df~~~~~~~~~~~~~~~~~~~~~~~y~a   83 (224)
                      .+.+++..+..++.|++.||.|||+.+   ++|+||+|.||+++.++.++++|||++......... ......++..|++
T Consensus        99 ~~~~~~~~~~~~~~ql~~~l~~lH~~~---~~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~~~~~-~~~~~~~~~~y~a  174 (288)
T cd05583          99 REHFTESEVRVYIAEIVLALDHLHQLG---IIYRDIKLENILLDSEGHVVLTDFGLSKEFLAEEEE-RAYSFCGTIEYMA  174 (288)
T ss_pred             cCCcCHHHHHHHHHHHHHHHHHHHHCC---eeccCCCHHHeEECCCCCEEEEECcccccccccccc-ccccccCCccccC
Confidence            356889999999999999999999999   999999999999999999999999998765432211 1122356788999


Q ss_pred             cccccCCC--cccccceEehhHHHHHHHhcccCCCCcCCCccc-ccccccCCCccccCccccCCcCHHHHHHHHHHHHHh
Q 041793           84 PEYASDGK--FSVKSDVFSFGILLLEIISGKKNRGFYHSDNKL-NLIGHVSMPSQLIDPCIQGSFNLVEVIRCIHIGLLC  160 (224)
Q Consensus        84 PE~~~~~~--~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~c  160 (224)
                      ||.+.+..  .+.++|+||||+++++|++|..||......... ........ .   ....+...+    ..+.+++.+|
T Consensus       175 PE~~~~~~~~~~~~~Dv~slG~il~el~tg~~p~~~~~~~~~~~~~~~~~~~-~---~~~~~~~~~----~~l~~li~~~  246 (288)
T cd05583         175 PEVIRGGSGGHDKAVDWWSLGVLTFELLTGASPFTVDGEQNSQSEISRRILK-S---KPPFPKTMS----AEARDFIQKL  246 (288)
T ss_pred             HHHhcCCCCCCcchhhhHHHHHHHHHHHhCCCCcccCcccchHHHHHHHHHc-c---CCCCCcccC----HHHHHHHHHH
Confidence            99987654  678999999999999999999998532211111 11110000 0   001111111    2456788999


Q ss_pred             ccCCCCCCCChHHHHHHhccC
Q 041793          161 VQQHPKDRPSMPSVILMLGSE  181 (224)
Q Consensus       161 l~~dp~~Rps~~~v~~~L~~~  181 (224)
                      |+.||++|||+.++...|+..
T Consensus       247 l~~~p~~R~t~~~~~~~l~~~  267 (288)
T cd05583         247 LEKDPKKRLGANGADEIKNHP  267 (288)
T ss_pred             hcCCHhhccCcchHHHHhcCc
Confidence            999999999999998887654


No 345
>KOG0986 consensus G protein-coupled receptor kinase [Signal transduction mechanisms]
Probab=99.92  E-value=2e-25  Score=180.26  Aligned_cols=152  Identities=26%  Similarity=0.338  Sum_probs=120.6

Q ss_pred             CCCChHHHHHHHHHHHHHHhhhhcCCCCceEecCCCCCceEECCCCCceEeeecceeecCCCCCCCcccccccccccCCc
Q 041793            5 KILDWPKRFHIICGTARGVMYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDEIEGNTNRVIGTYGYMAP   84 (224)
Q Consensus         5 ~~l~~~~~~~i~~qi~~~l~~Lh~~~~~~i~H~dl~~~nil~~~~~~~kl~df~~~~~~~~~~~~~~~~~~~~~~~y~aP   84 (224)
                      ..|+++..+.++++|+.||++||.++   |+.||+||+|||+|..|+++++|+|+|..+..+..   ....+||.+|+||
T Consensus       282 ~gF~e~ra~FYAAEi~cGLehlH~~~---iVYRDLKPeNILLDd~GhvRISDLGLAvei~~g~~---~~~rvGT~GYMAP  355 (591)
T KOG0986|consen  282 PGFDEQRARFYAAEIICGLEHLHRRR---IVYRDLKPENILLDDHGHVRISDLGLAVEIPEGKP---IRGRVGTVGYMAP  355 (591)
T ss_pred             CCCchHHHHHHHHHHHhhHHHHHhcc---eeeccCChhheeeccCCCeEeeccceEEecCCCCc---cccccCcccccCH
Confidence            46899999999999999999999999   99999999999999999999999999998765432   2234899999999


Q ss_pred             ccccCCCcccccceEehhHHHHHHHhcccCCCCcCCCccccccc-ccCCCccccCccccCCcCHHHHHHHHHHHHHhccC
Q 041793           85 EYASDGKFSVKSDVFSFGILLLEIISGKKNRGFYHSDNKLNLIG-HVSMPSQLIDPCIQGSFNLVEVIRCIHIGLLCVQQ  163 (224)
Q Consensus        85 E~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~  163 (224)
                      |++.+..|+.+.|.|+|||++|+|+.|..||..+......+-+. .+....    ...+..++    ..+.+|....|+.
T Consensus       356 Evl~ne~Y~~s~Dwf~lGCllYemi~G~sPFr~~KeKvk~eEvdrr~~~~~----~ey~~kFS----~eakslc~~LL~K  427 (591)
T KOG0986|consen  356 EVLQNEVYDFSPDWFSLGCLLYEMIAGHSPFRQRKEKVKREEVDRRTLEDP----EEYSDKFS----EEAKSLCEGLLTK  427 (591)
T ss_pred             HHHcCCcccCCccHHHHHhHHHHHHcccCchhhhhhhhhHHHHHHHHhcch----hhcccccC----HHHHHHHHHHHcc
Confidence            99999999999999999999999999999998766554442221 111100    11111222    2455777799999


Q ss_pred             CCCCCCC
Q 041793          164 HPKDRPS  170 (224)
Q Consensus       164 dp~~Rps  170 (224)
                      ||++|..
T Consensus       428 dp~~RLG  434 (591)
T KOG0986|consen  428 DPEKRLG  434 (591)
T ss_pred             CHHHhcc
Confidence            9999953


No 346
>cd08225 STKc_Nek5 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 5. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 5 (Nek5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek5 subfamily is one of a family of 11 different Neks (Nek1-11). The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Neks are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. The specific function of Nek5 is unknown.
Probab=99.92  E-value=4.9e-25  Score=173.24  Aligned_cols=157  Identities=23%  Similarity=0.385  Sum_probs=117.8

Q ss_pred             CCChHHHHHHHHHHHHHHhhhhcCCCCceEecCCCCCceEECCCCC-ceEeeecceeecCCCCCCCcccccccccccCCc
Q 041793            6 ILDWPKRFHIICGTARGVMYLHQDSRLRIIHRDLKASNVLLDQDMN-PKISDFGLARAFGGDEIEGNTNRVIGTYGYMAP   84 (224)
Q Consensus         6 ~l~~~~~~~i~~qi~~~l~~Lh~~~~~~i~H~dl~~~nil~~~~~~-~kl~df~~~~~~~~~~~~~~~~~~~~~~~y~aP   84 (224)
                      .+++..++.++.|++.||.|||+.+   ++|+||+|+||+++.++. ++++|||.+........  ......++..|+||
T Consensus        97 ~~~~~~~~~~~~~l~~~l~~lh~~~---i~H~dl~~~nil~~~~~~~~~l~d~~~~~~~~~~~~--~~~~~~~~~~~~ap  171 (257)
T cd08225          97 LFSEDQILSWFVQISLGLKHIHDRK---ILHRDIKSQNIFLSKNGMVAKLGDFGIARQLNDSME--LAYTCVGTPYYLSP  171 (257)
T ss_pred             CCCHHHHHHHHHHHHHHHHHHHHCC---cccccCCHHHEEEcCCCCeEEecccccchhccCCcc--cccccCCCccccCH
Confidence            5789999999999999999999999   999999999999998764 69999999876543221  11223567789999


Q ss_pred             ccccCCCcccccceEehhHHHHHHHhcccCCCCcCCCcccccccccCCCccccCccccCCcCHHHHHHHHHHHHHhccCC
Q 041793           85 EYASDGKFSVKSDVFSFGILLLEIISGKKNRGFYHSDNKLNLIGHVSMPSQLIDPCIQGSFNLVEVIRCIHIGLLCVQQH  164 (224)
Q Consensus        85 E~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~d  164 (224)
                      |.+.+..++.++|+||||++++++++|..||........   .....  ...... .....    ...+.+++.+||+.+
T Consensus       172 e~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~---~~~~~--~~~~~~-~~~~~----~~~~~~~i~~~l~~~  241 (257)
T cd08225         172 EICQNRPYNNKTDIWSLGCVLYELCTLKHPFEGNNLHQL---VLKIC--QGYFAP-ISPNF----SRDLRSLISQLFKVS  241 (257)
T ss_pred             HHHcCCCCCchhhHHHHHHHHHHHHhCCCCCCCccHHHH---HHHHh--cccCCC-CCCCC----CHHHHHHHHHHhccC
Confidence            998888889999999999999999999999754322111   11111  000110 01111    134778899999999


Q ss_pred             CCCCCChHHHHHH
Q 041793          165 PKDRPSMPSVILM  177 (224)
Q Consensus       165 p~~Rps~~~v~~~  177 (224)
                      |++|||+.+|++.
T Consensus       242 p~~Rpt~~~ll~~  254 (257)
T cd08225         242 PRDRPSITSILKR  254 (257)
T ss_pred             hhhCcCHHHHhhC
Confidence            9999999999753


No 347
>KOG4257 consensus Focal adhesion tyrosine kinase FAK, contains FERM domain [Signal transduction mechanisms]
Probab=99.92  E-value=3e-25  Score=185.39  Aligned_cols=164  Identities=23%  Similarity=0.323  Sum_probs=129.7

Q ss_pred             CCCCCCChHHHHHHHHHHHHHHhhhhcCCCCceEecCCCCCceEECCCCCceEeeecceeecCCCCCCCccccccccccc
Q 041793            2 ERCKILDWPKRFHIICGTARGVMYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDEIEGNTNRVIGTYGY   81 (224)
Q Consensus         2 ~~~~~l~~~~~~~i~~qi~~~l~~Lh~~~~~~i~H~dl~~~nil~~~~~~~kl~df~~~~~~~~~~~~~~~~~~~~~~~y   81 (224)
                      .++..|+..+...++.||+.||.|||+..   ++||||...||++...-.+||+|||+++.......-... ...-++.|
T Consensus       483 ~nk~sL~l~tL~ly~~Qi~talaYLeSkr---fVHRDIAaRNiLVsSp~CVKLaDFGLSR~~ed~~yYkaS-~~kLPIKW  558 (974)
T KOG4257|consen  483 QNKDSLPLRTLTLYCYQICTALAYLESKR---FVHRDIAARNILVSSPQCVKLADFGLSRYLEDDAYYKAS-RGKLPIKW  558 (974)
T ss_pred             hccccchHHHHHHHHHHHHHHHHHHHhhc---hhhhhhhhhheeecCcceeeecccchhhhccccchhhcc-ccccceee
Confidence            45667899999999999999999999998   999999999999999999999999999987655433222 22236789


Q ss_pred             CCcccccCCCcccccceEehhHHHHHHH-hcccCCCCcCCCcccccccccCCCccccCccccCCcCHHHHHHHHHHHHHh
Q 041793           82 MAPEYASDGKFSVKSDVFSFGILLLEII-SGKKNRGFYHSDNKLNLIGHVSMPSQLIDPCIQGSFNLVEVIRCIHIGLLC  160 (224)
Q Consensus        82 ~aPE~~~~~~~~~~~Di~slG~il~~l~-~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~c  160 (224)
                      ++||.+....++.++|||-||+++||++ .|..||.+....+....++.... ...++.|.+         .+..|+.+|
T Consensus       559 maPESINfRrFTtASDVWMFgVCmWEIl~lGvkPfqgvkNsDVI~~iEnGeR-lP~P~nCPp---------~LYslmskc  628 (974)
T KOG4257|consen  559 MAPESINFRRFTTASDVWMFGVCMWEILSLGVKPFQGVKNSDVIGHIENGER-LPCPPNCPP---------ALYSLMSKC  628 (974)
T ss_pred             cCccccchhcccchhhHHHHHHHHHHHHHhcCCccccccccceEEEecCCCC-CCCCCCCCh---------HHHHHHHHH
Confidence            9999999999999999999999999987 58889887666655444433221 111222222         345778899


Q ss_pred             ccCCCCCCCChHHHHHHhc
Q 041793          161 VQQHPKDRPSMPSVILMLG  179 (224)
Q Consensus       161 l~~dp~~Rps~~~v~~~L~  179 (224)
                      |.+||.+||.+.++...|.
T Consensus       629 WayeP~kRPrftei~~~ls  647 (974)
T KOG4257|consen  629 WAYEPSKRPRFTEIKAILS  647 (974)
T ss_pred             hccCcccCCcHHHHHHHHH
Confidence            9999999999999988764


No 348
>cd07851 STKc_p38 Catalytic domain of the Serine/Threonine Kinase, p38 Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), p38 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They function in the regulation of the cell cycle, cell development, cell differentiation, senescence, tumorigenesis, apoptosis, pain development and pain progression, and immune responses. p38 kinases are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK
Probab=99.92  E-value=2.4e-25  Score=182.67  Aligned_cols=164  Identities=26%  Similarity=0.356  Sum_probs=118.2

Q ss_pred             CCCChHHHHHHHHHHHHHHhhhhcCCCCceEecCCCCCceEECCCCCceEeeecceeecCCCCCCCcccccccccccCCc
Q 041793            5 KILDWPKRFHIICGTARGVMYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDEIEGNTNRVIGTYGYMAP   84 (224)
Q Consensus         5 ~~l~~~~~~~i~~qi~~~l~~Lh~~~~~~i~H~dl~~~nil~~~~~~~kl~df~~~~~~~~~~~~~~~~~~~~~~~y~aP   84 (224)
                      +.+++.+++.++.||+.||.|||+.|   ++|+||+|+||+++.++.++|+|||++......     .....++..|+||
T Consensus       113 ~~l~~~~~~~~~~ql~~aL~~LH~~g---i~H~dlkp~Nill~~~~~~kL~dfg~~~~~~~~-----~~~~~~~~~y~aP  184 (343)
T cd07851         113 QKLSDDHIQFLVYQILRGLKYIHSAG---IIHRDLKPSNIAVNEDCELKILDFGLARHTDDE-----MTGYVATRWYRAP  184 (343)
T ss_pred             CCCCHHHHHHHHHHHHHHHHHHHHCC---eecCCCCHHHeEECCCCCEEEcccccccccccc-----ccCCcccccccCH
Confidence            46899999999999999999999999   999999999999999999999999998765322     1223567789999


Q ss_pred             ccccC-CCcccccceEehhHHHHHHHhcccCCCCcCCCccccc-ccccCCCc--------------------cccCcccc
Q 041793           85 EYASD-GKFSVKSDVFSFGILLLEIISGKKNRGFYHSDNKLNL-IGHVSMPS--------------------QLIDPCIQ  142 (224)
Q Consensus        85 E~~~~-~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~-~~~~~~~~--------------------~~~~~~~~  142 (224)
                      |.+.+ ..++.++|+||||++++++++|+.||........... ......+.                    ........
T Consensus       185 E~~~~~~~~~~~~DvwslGv~l~elltg~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  264 (343)
T cd07851         185 EIMLNWMHYNQTVDIWSVGCIMAELLTGKTLFPGSDHIDQLKRIMNLVGTPDEELLQKISSESARNYIQSLPQMPKKDFK  264 (343)
T ss_pred             HHHhCCCCCCchHhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHhcCCCCHHHHhhccchhHHHHHHhccccCCCCHH
Confidence            98865 3578999999999999999999999854332111100 00000000                    00000000


Q ss_pred             CCcCHHHHHHHHHHHHHhccCCCCCCCChHHHHHH
Q 041793          143 GSFNLVEVIRCIHIGLLCVQQHPKDRPSMPSVILM  177 (224)
Q Consensus       143 ~~~~~~~~~~~~~li~~cl~~dp~~Rps~~~v~~~  177 (224)
                      .... .....+.+++.+||+.||++|||+.+|++.
T Consensus       265 ~~~~-~~s~~l~dli~~~l~~~P~~Rpt~~ell~h  298 (343)
T cd07851         265 EVFS-GANPLAIDLLEKMLVLDPDKRITAAEALAH  298 (343)
T ss_pred             HHhc-cCCHHHHHHHHHhCCCChhhCCCHHHHhcC
Confidence            0000 012457789999999999999999999653


No 349
>cd05581 STKc_PDK1 Catalytic domain of the Protein Serine/Threonine Kinase, Phosphoinositide-dependent kinase 1. Serine/Threonine Kinases (STKs), Phosphoinositide-dependent kinase 1 (PDK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PDK1 carries an N-terminal catalytic domain and a C-terminal pleckstrin homology (PH) domain that binds phosphoinositides. It phosphorylates the activation loop of AGC kinases that are regulated by PI3K such as PKB, SGK, and PKC, among others, and is crucial for their activation. Thus, it contributes in regulating many processes including metabolism, growth, proliferation, and survival. PDK1 also has the ability to auto
Probab=99.92  E-value=5.8e-25  Score=174.84  Aligned_cols=158  Identities=25%  Similarity=0.329  Sum_probs=119.8

Q ss_pred             CCCChHHHHHHHHHHHHHHhhhhcCCCCceEecCCCCCceEECCCCCceEeeecceeecCCCCCC---------------
Q 041793            5 KILDWPKRFHIICGTARGVMYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDEIE---------------   69 (224)
Q Consensus         5 ~~l~~~~~~~i~~qi~~~l~~Lh~~~~~~i~H~dl~~~nil~~~~~~~kl~df~~~~~~~~~~~~---------------   69 (224)
                      +.+++.+++.++.|++.||.|||+.|   ++|+||+|+||+++.++.++++|||++.........               
T Consensus        97 ~~l~~~~~~~i~~ql~~~l~~Lh~~~---~~H~dl~~~ni~i~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~~~~~~~  173 (280)
T cd05581          97 GSLDEKCTRFYAAEILLALEYLHSKG---IIHRDLKPENILLDKDMHIKITDFGTAKVLDPNSSPESNKGDATNIDSQIE  173 (280)
T ss_pred             CCCCHHHHHHHHHHHHHHHHHHHHCC---eeecCCCHHHeEECCCCCEEecCCccccccCCccccccCCCCCcccccccc
Confidence            47899999999999999999999999   999999999999999999999999998866433211               


Q ss_pred             ---CcccccccccccCCcccccCCCcccccceEehhHHHHHHHhcccCCCCcCCCcccccccccCCCccccCccccCCcC
Q 041793           70 ---GNTNRVIGTYGYMAPEYASDGKFSVKSDVFSFGILLLEIISGKKNRGFYHSDNKLNLIGHVSMPSQLIDPCIQGSFN  146 (224)
Q Consensus        70 ---~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  146 (224)
                         .......++..|++||.+.+..++.++|+|+||++++++++|..||............   ......    ..... 
T Consensus       174 ~~~~~~~~~~~~~~~~~Pe~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~~~~~---~~~~~~----~~~~~-  245 (280)
T cd05581         174 KNRRRFASFVGTAEYVSPELLNEKPAGKSSDLWALGCIIYQMLTGKPPFRGSNEYLTFQKI---LKLEYS----FPPNF-  245 (280)
T ss_pred             ccccccccccCCccccCHHHhCCCCCChhhhHHHHHHHHHHHHhCCCCCCCccHHHHHHHH---HhcCCC----CCCcc-
Confidence               1112235677899999988888899999999999999999999998654321111111   000000    00111 


Q ss_pred             HHHHHHHHHHHHHhccCCCCCCCCh----HHHHH
Q 041793          147 LVEVIRCIHIGLLCVQQHPKDRPSM----PSVIL  176 (224)
Q Consensus       147 ~~~~~~~~~li~~cl~~dp~~Rps~----~~v~~  176 (224)
                         ...+.+++.+||+.+|++||++    +++++
T Consensus       246 ---~~~~~~li~~~l~~~p~~R~~~~~~~~~ll~  276 (280)
T cd05581         246 ---PPDAKDLIEKLLVLDPQDRLGVNEGYDELKA  276 (280)
T ss_pred             ---CHHHHHHHHHHhcCCHhhCCCcccCHHHHhc
Confidence               2346789999999999999999    77754


No 350
>KOG4278 consensus Protein tyrosine kinase [Signal transduction mechanisms]
Probab=99.92  E-value=2.7e-25  Score=185.76  Aligned_cols=158  Identities=27%  Similarity=0.387  Sum_probs=119.6

Q ss_pred             ChHHHHHHHHHHHHHHhhhhcCCCCceEecCCCCCceEECCCCCceEeeecceeecCCCCCCCcccccccccccCCcccc
Q 041793            8 DWPKRFHIICGTARGVMYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDEIEGNTNRVIGTYGYMAPEYA   87 (224)
Q Consensus         8 ~~~~~~~i~~qi~~~l~~Lh~~~~~~i~H~dl~~~nil~~~~~~~kl~df~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~   87 (224)
                      +---.+.++.||..|++||..++   ++||||.+.|||+..+..+|++|||+++.+...+....... --++.|.|||-+
T Consensus       363 ~avvLlyMAtQIsSaMeYLEkkn---FIHRDLAARNCLVgEnhiVKvADFGLsRlMtgDTYTAHAGA-KFPIKWTAPEsL  438 (1157)
T KOG4278|consen  363 PAVVLLYMATQISSAMEYLEKKN---FIHRDLAARNCLVGENHIVKVADFGLSRLMTGDTYTAHAGA-KFPIKWTAPESL  438 (1157)
T ss_pred             chhHHHHHHHHHHHHHHHHHHhh---hhhhhhhhhhccccccceEEeeccchhhhhcCCceecccCc-cCcccccCcccc
Confidence            34456789999999999999999   99999999999999999999999999998765443322221 225689999999


Q ss_pred             cCCCcccccceEehhHHHHHHHh-cccCCCCcCCCcccccccccCCCccccCccccCCcCHHHHHHHHHHHHHhccCCCC
Q 041793           88 SDGKFSVKSDVFSFGILLLEIIS-GKKNRGFYHSDNKLNLIGHVSMPSQLIDPCIQGSFNLVEVIRCIHIGLLCVQQHPK  166 (224)
Q Consensus        88 ~~~~~~~~~Di~slG~il~~l~~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dp~  166 (224)
                      ....++.|+|||+||+++||+.+ |..||.+.+..+.-.++.... +...++.|     ..    .+.+||+.||+|.|.
T Consensus       439 AyNtFSiKSDVWAFGVLLWEIATYGMsPYPGidlSqVY~LLEkgy-RM~~PeGC-----Pp----kVYeLMraCW~WsPs  508 (1157)
T KOG4278|consen  439 AYNTFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYGLLEKGY-RMDGPEGC-----PP----KVYELMRACWNWSPS  508 (1157)
T ss_pred             cccccccchhhHHHHHHHHHHHhcCCCCCCCccHHHHHHHHhccc-cccCCCCC-----CH----HHHHHHHHHhcCCcc
Confidence            99999999999999999999987 555654443333322322221 11112222     21    366788999999999


Q ss_pred             CCCChHHHHHHhc
Q 041793          167 DRPSMPSVILMLG  179 (224)
Q Consensus       167 ~Rps~~~v~~~L~  179 (224)
                      .||+|.|+-+.++
T Consensus       509 DRPsFaeiHqafE  521 (1157)
T KOG4278|consen  509 DRPSFAEIHQAFE  521 (1157)
T ss_pred             cCccHHHHHHHHH
Confidence            9999999998764


No 351
>cd05576 STKc_RPK118_like Catalytic domain of the Protein Serine/Threonine Kinases, RPK118 and similar proteins. Serine/Threonine Kinases (STKs), RPK118-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The RPK118-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily show similarity to human RPK118, which contains an N-terminal Phox homology (PX) domain, a Microtubule Interacting and Trafficking (MIT) domain, and a kinase domain containing a long insert. Also included in the family is human RPK60 (or ribosomal protein S6 kinase-like 1), which also contains MIT and kinase domains but lacks a PX domain. RPK118 binds sphingosine kinase, a key enzyme in the synthesis of sphingosine 1-phospha
Probab=99.91  E-value=5.5e-25  Score=171.55  Aligned_cols=144  Identities=19%  Similarity=0.184  Sum_probs=110.7

Q ss_pred             CCCChHHHHHHHHHHHHHHhhhhcCCCCceEecCCCCCceEECCCCCceEeeecceeecCCCCCCCcccccccccccCCc
Q 041793            5 KILDWPKRFHIICGTARGVMYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDEIEGNTNRVIGTYGYMAP   84 (224)
Q Consensus         5 ~~l~~~~~~~i~~qi~~~l~~Lh~~~~~~i~H~dl~~~nil~~~~~~~kl~df~~~~~~~~~~~~~~~~~~~~~~~y~aP   84 (224)
                      ..+++..+..++.|++.||.|||+.+   ++|+||||+||+++.++.+++.|||.+......     .....++..|++|
T Consensus        80 ~~l~~~~~~~~~~ql~~~l~~lH~~~---i~H~dlkp~Nil~~~~~~~~l~df~~~~~~~~~-----~~~~~~~~~y~aP  151 (237)
T cd05576          80 LNIPEECVKRWAAEMVVALDALHREG---IVCRDLNPNNILLDDRGHIQLTYFSRWSEVEDS-----CDGEAVENMYCAP  151 (237)
T ss_pred             cCCCHHHHHHHHHHHHHHHHHHHhCC---eeccCCCHHHEEEcCCCCEEEecccchhccccc-----cccCCcCccccCC
Confidence            45899999999999999999999999   999999999999999999999999987654322     1122345679999


Q ss_pred             ccccCCCcccccceEehhHHHHHHHhcccCCCCcCCCcccccccccCCCccccCccccCCcCHHHHHHHHHHHHHhccCC
Q 041793           85 EYASDGKFSVKSDVFSFGILLLEIISGKKNRGFYHSDNKLNLIGHVSMPSQLIDPCIQGSFNLVEVIRCIHIGLLCVQQH  164 (224)
Q Consensus        85 E~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~d  164 (224)
                      |.+.+..++.++|+||+|++++++++|..++........    ..    ..   ...+...+    ..+.+++.+||+.|
T Consensus       152 E~~~~~~~~~~~DvwslG~il~el~~g~~~~~~~~~~~~----~~----~~---~~~~~~~~----~~~~~li~~~l~~d  216 (237)
T cd05576         152 EVGGISEETEACDWWSLGAILFELLTGKTLVECHPSGIN----TH----TT---LNIPEWVS----EEARSLLQQLLQFN  216 (237)
T ss_pred             cccCCCCCCchhhHHHHHHHHHHHHHCcchhhcCchhcc----cc----cc---cCCcccCC----HHHHHHHHHHccCC
Confidence            998888889999999999999999999987643221100    00    00   00111111    34678899999999


Q ss_pred             CCCCCCh
Q 041793          165 PKDRPSM  171 (224)
Q Consensus       165 p~~Rps~  171 (224)
                      |++||++
T Consensus       217 p~~R~~~  223 (237)
T cd05576         217 PTERLGA  223 (237)
T ss_pred             HHHhcCC
Confidence            9999997


No 352
>cd06653 STKc_MEKK3_like_1 Catalytic domain of MAP/ERK kinase kinase 3-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3)-like subfamily, catalytic (c) domain, functionally uncharacterized subgroup 1. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The MEKK3-like subfamily is composed of MEKK3, MEKK2, and related proteins, all containing an N-terminal PB1 domain, which mediates oligomerization, and a C-terminal catalytic domain. MEKK2 and MEKK3 are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks), proteins that phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phospho
Probab=99.91  E-value=1.3e-24  Score=171.83  Aligned_cols=160  Identities=24%  Similarity=0.345  Sum_probs=118.6

Q ss_pred             CCCCChHHHHHHHHHHHHHHhhhhcCCCCceEecCCCCCceEECCCCCceEeeecceeecCCCCCC-CcccccccccccC
Q 041793            4 CKILDWPKRFHIICGTARGVMYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDEIE-GNTNRVIGTYGYM   82 (224)
Q Consensus         4 ~~~l~~~~~~~i~~qi~~~l~~Lh~~~~~~i~H~dl~~~nil~~~~~~~kl~df~~~~~~~~~~~~-~~~~~~~~~~~y~   82 (224)
                      .+.+++..++.++.||+.||.|||+.+   ++|+||+|+||+++.++.++++|||++......... .......++..|+
T Consensus       100 ~~~l~~~~~~~~~~~i~~al~~LH~~~---i~H~dl~p~ni~i~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~y~  176 (264)
T cd06653         100 YGALTENVTRRYTRQILQGVSYLHSNM---IVHRDIKGANILRDSAGNVKLGDFGASKRIQTICMSGTGIKSVTGTPYWM  176 (264)
T ss_pred             cCCCCHHHHHHHHHHHHHHHHHHHhCC---EecCCCCHHHEEEcCCCCEEECccccccccccccccCccccccCCccccc
Confidence            356889999999999999999999999   999999999999999999999999999865321111 1112245678899


Q ss_pred             CcccccCCCcccccceEehhHHHHHHHhcccCCCCcCCCcccccccccCCCccccCccccCCcCHHHHHHHHHHHHHhcc
Q 041793           83 APEYASDGKFSVKSDVFSFGILLLEIISGKKNRGFYHSDNKLNLIGHVSMPSQLIDPCIQGSFNLVEVIRCIHIGLLCVQ  162 (224)
Q Consensus        83 aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~  162 (224)
                      |||.+.+..++.++|+||||++++++++|+.||.......  ........+.   .+..+..    ....+.+++.+||+
T Consensus       177 aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~--~~~~~~~~~~---~~~~p~~----~~~~~~~~i~~~l~  247 (264)
T cd06653         177 SPEVISGEGYGRKADVWSVACTVVEMLTEKPPWAEYEAMA--AIFKIATQPT---KPMLPDG----VSDACRDFLKQIFV  247 (264)
T ss_pred             CHhhhcCCCCCccccHHHHHHHHHHHHhCCCCCCccCHHH--HHHHHHcCCC---CCCCCcc----cCHHHHHHHHHHhc
Confidence            9999988888999999999999999999999986432211  1111111110   1111111    12346788889999


Q ss_pred             CCCCCCCChHHHHH
Q 041793          163 QHPKDRPSMPSVIL  176 (224)
Q Consensus       163 ~dp~~Rps~~~v~~  176 (224)
                       +|.+||++.+++.
T Consensus       248 -~~~~r~~~~~~~~  260 (264)
T cd06653         248 -EEKRRPTAEFLLR  260 (264)
T ss_pred             -CcccCccHHHHhc
Confidence             5799999998865


No 353
>cd07836 STKc_Pho85 Catalytic domain of the Serine/Threonine Kinase, Fungal Cyclin-Dependent protein Kinase Pho85. Serine/Threonine Kinases (STKs), Pho85 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Pho85 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Pho85 is a multifunctional Cyclin-Dependent protein Kinase (CDK) in yeast. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. Pho85 is regulated by 10 different cyclins (Pcls) and plays a role in G1 progression, cell polarity, phosphate and glycogen metabolism, gene expression, and in signaling changes in the environment. 
Probab=99.91  E-value=6.5e-25  Score=175.16  Aligned_cols=167  Identities=25%  Similarity=0.324  Sum_probs=117.4

Q ss_pred             CCCChHHHHHHHHHHHHHHhhhhcCCCCceEecCCCCCceEECCCCCceEeeecceeecCCCCCCCcccccccccccCCc
Q 041793            5 KILDWPKRFHIICGTARGVMYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDEIEGNTNRVIGTYGYMAP   84 (224)
Q Consensus         5 ~~l~~~~~~~i~~qi~~~l~~Lh~~~~~~i~H~dl~~~nil~~~~~~~kl~df~~~~~~~~~~~~~~~~~~~~~~~y~aP   84 (224)
                      ..+++.+++.++.||+.||.|||+.|   ++|+||+|+||+++.++.++++|||++........  ......++..|++|
T Consensus        95 ~~~~~~~~~~~~~qi~~~l~~lH~~~---i~h~dl~p~ni~~~~~~~~~l~d~g~~~~~~~~~~--~~~~~~~~~~y~~P  169 (284)
T cd07836          95 GALDPNTVKSFTYQLLKGIAFCHENR---VLHRDLKPQNLLINKRGELKLADFGLARAFGIPVN--TFSNEVVTLWYRAP  169 (284)
T ss_pred             CCcCHHHHHHHHHHHHHHHHHHHHCC---eeeCCCCHHHEEECCCCcEEEeecchhhhhcCCcc--ccccccccccccCh
Confidence            56899999999999999999999999   99999999999999999999999999875432211  11223456789999


Q ss_pred             ccccCC-CcccccceEehhHHHHHHHhcccCCCCcCCCcccccc-cccCCCc----------cccCccccCC--cC----
Q 041793           85 EYASDG-KFSVKSDVFSFGILLLEIISGKKNRGFYHSDNKLNLI-GHVSMPS----------QLIDPCIQGS--FN----  146 (224)
Q Consensus        85 E~~~~~-~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~-~~~~~~~----------~~~~~~~~~~--~~----  146 (224)
                      |.+.+. .++.++|+|+||++++++++|+.||...........+ .....+.          ..........  ..    
T Consensus       170 E~~~~~~~~~~~~Dv~slG~~l~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  249 (284)
T cd07836         170 DVLLGSRTYSTSIDIWSVGCIMAEMITGRPLFPGTNNEDQLLKIFRIMGTPTESTWPGISQLPEYKPTFPRYPPQDLQQL  249 (284)
T ss_pred             HHhcCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHHHhCCCChhhHHHHhcCchhcccccCCChHHHHHH
Confidence            987654 4688999999999999999999998653322111100 0000000          0000000000  00    


Q ss_pred             -HHHHHHHHHHHHHhccCCCCCCCChHHHHH
Q 041793          147 -LVEVIRCIHIGLLCVQQHPKDRPSMPSVIL  176 (224)
Q Consensus       147 -~~~~~~~~~li~~cl~~dp~~Rps~~~v~~  176 (224)
                       ......+.+++.+||+.||.+||++.++++
T Consensus       250 ~~~~~~~~~~~i~~~l~~~p~~R~~~~~~l~  280 (284)
T cd07836         250 FPHADPLGIDLLHRLLQLNPELRISAHDALQ  280 (284)
T ss_pred             hhhcCcHHHHHHHHHhcCCcccCCCHHHHhc
Confidence             011234678999999999999999999974


No 354
>cd05123 STKc_AGC Catalytic domain of AGC family Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), AGC (Protein Kinases A, G and C) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The AGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and Phosphoinositide 3-Kinase (PI3K). Members of this family include cAMP-dependent Protein Kinase (PKA), cGMP-dependent Protein Kinase (PKG), Protein Kinase C (PKC), Protein Kinase B (PKB), G protein-coupled Receptor Kinase (GRK), Serum- and Glucocorticoid-induced Kinase (SGK), and 70 kDa ribosomal Protein S6 Kinase (p70S6K or S6K), among others. AGC kinases share an activation mechanism based on the phosphorylation of up to three sites: the activation loop (A-loop), the hydrophobic motif (HM) and the 
Probab=99.91  E-value=1.6e-24  Score=169.72  Aligned_cols=154  Identities=25%  Similarity=0.317  Sum_probs=117.5

Q ss_pred             CCCCChHHHHHHHHHHHHHHhhhhcCCCCceEecCCCCCceEECCCCCceEeeecceeecCCCCCCCcccccccccccCC
Q 041793            4 CKILDWPKRFHIICGTARGVMYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDEIEGNTNRVIGTYGYMA   83 (224)
Q Consensus         4 ~~~l~~~~~~~i~~qi~~~l~~Lh~~~~~~i~H~dl~~~nil~~~~~~~kl~df~~~~~~~~~~~~~~~~~~~~~~~y~a   83 (224)
                      .+.+++..++.++.|++.||.|||+.+   ++|+||+|.||+++.++.++++|||.+.......  .......++..|++
T Consensus        87 ~~~l~~~~~~~~~~qi~~~l~~lh~~~---~~H~~l~p~ni~~~~~~~~~l~d~~~~~~~~~~~--~~~~~~~~~~~~~~  161 (250)
T cd05123          87 EGRFSEERARFYAAEIVLALEYLHSLG---IIYRDLKPENILLDADGHIKLTDFGLAKELSSEG--SRTNTFCGTPEYLA  161 (250)
T ss_pred             cCCCCHHHHHHHHHHHHHHHHHHHHCC---ceecCCCcceEEEcCCCcEEEeecCcceecccCC--CcccCCcCCccccC
Confidence            346899999999999999999999999   9999999999999999999999999988754322  11223456778999


Q ss_pred             cccccCCCcccccceEehhHHHHHHHhcccCCCCcCCCcccccccccCCCccccCccccCCcCHHHHHHHHHHHHHhccC
Q 041793           84 PEYASDGKFSVKSDVFSFGILLLEIISGKKNRGFYHSDNKLNLIGHVSMPSQLIDPCIQGSFNLVEVIRCIHIGLLCVQQ  163 (224)
Q Consensus        84 PE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~  163 (224)
                      ||...+...+.++|+|+||++++++++|..||......   ...........    ......    ...+.+++.+||..
T Consensus       162 Pe~~~~~~~~~~~D~~slG~~~~~l~~g~~p~~~~~~~---~~~~~~~~~~~----~~~~~~----~~~l~~~i~~~l~~  230 (250)
T cd05123         162 PEVLLGKGYGKAVDWWSLGVLLYEMLTGKPPFYAEDRK---EIYEKILKDPL----RFPEFL----SPEARDLISGLLQK  230 (250)
T ss_pred             hHHhCCCCCCchhhHHHHHHHHHHHHHCCCCCCCCCHH---HHHHHHhcCCC----CCCCCC----CHHHHHHHHHHhcC
Confidence            99998888889999999999999999999998543321   11111111010    011111    23467889999999


Q ss_pred             CCCCCCChHH
Q 041793          164 HPKDRPSMPS  173 (224)
Q Consensus       164 dp~~Rps~~~  173 (224)
                      ||++||++.+
T Consensus       231 ~p~~R~~~~~  240 (250)
T cd05123         231 DPTKRLGSGG  240 (250)
T ss_pred             CHhhCCCccc
Confidence            9999999944


No 355
>cd07854 STKc_MAPK4_6 Catalytic domain of the Serine/Threonine Kinases, Mitogen-Activated Protein Kinases 4 and 6. Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase 4 (MAPK4) and MAPK6 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK4/6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. MAPK4 is also called ERK4 or p63MAPK, while MAPK6 is also called ERK3 or p97MAPK. MAPK4 and MAPK6 are atypical MAPKs that are not regulated by MAP2Ks. MAPK6 is expressed ubiquitously with highest amounts in brain and skeletal muscle. It may be involved in the control of cell differentiation by negatively regulating cell cycle progressi
Probab=99.91  E-value=1.2e-24  Score=178.48  Aligned_cols=170  Identities=22%  Similarity=0.306  Sum_probs=115.8

Q ss_pred             CCCChHHHHHHHHHHHHHHhhhhcCCCCceEecCCCCCceEECC-CCCceEeeecceeecCCCCCCC-cccccccccccC
Q 041793            5 KILDWPKRFHIICGTARGVMYLHQDSRLRIIHRDLKASNVLLDQ-DMNPKISDFGLARAFGGDEIEG-NTNRVIGTYGYM   82 (224)
Q Consensus         5 ~~l~~~~~~~i~~qi~~~l~~Lh~~~~~~i~H~dl~~~nil~~~-~~~~kl~df~~~~~~~~~~~~~-~~~~~~~~~~y~   82 (224)
                      +.+++..++.++.||+.||.|||+.|   ++|+||+|+||+++. ++.++++|||.+.......... ......++..|+
T Consensus       109 ~~l~~~~~~~~~~qi~~aL~~LH~~g---ivH~dikp~Nili~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~y~  185 (342)
T cd07854         109 GPLSEEHARLFMYQLLRGLKYIHSAN---VLHRDLKPANVFINTEDLVLKIGDFGLARIVDPHYSHKGYLSEGLVTKWYR  185 (342)
T ss_pred             CCCCHHHHHHHHHHHHHHHHHHHhCC---cccCCCCHHHEEEcCCCceEEECCcccceecCCcccccccccccccccccc
Confidence            46899999999999999999999999   999999999999974 5678999999987653221111 112234577899


Q ss_pred             CcccccC-CCcccccceEehhHHHHHHHhcccCCCCcCCCccccc-ccccC-------------CCccccCccccCCcCH
Q 041793           83 APEYASD-GKFSVKSDVFSFGILLLEIISGKKNRGFYHSDNKLNL-IGHVS-------------MPSQLIDPCIQGSFNL  147 (224)
Q Consensus        83 aPE~~~~-~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~-~~~~~-------------~~~~~~~~~~~~~~~~  147 (224)
                      |||.+.+ ..++.++|+|||||++++|++|+.||........... .....             ................
T Consensus       186 aPE~~~~~~~~~~~~DiwSlGvil~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  265 (342)
T cd07854         186 SPRLLLSPNNYTKAIDMWAAGCIFAEMLTGKPLFAGAHELEQMQLILESVPVVREEDRNELLNVIPSFVRNDGGEPRRPL  265 (342)
T ss_pred             CHHHHhCccccCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCCCChHHhhhhhhhhhhhhhhcccccCCCH
Confidence            9997654 4578899999999999999999999854332111000 00000             0000000000000000


Q ss_pred             H-----HHHHHHHHHHHhccCCCCCCCChHHHHHH
Q 041793          148 V-----EVIRCIHIGLLCVQQHPKDRPSMPSVILM  177 (224)
Q Consensus       148 ~-----~~~~~~~li~~cl~~dp~~Rps~~~v~~~  177 (224)
                      .     ....+.+++.+||+.||++|||+.+++..
T Consensus       266 ~~~~~~~~~~~~~li~~~L~~dP~~R~t~~ell~h  300 (342)
T cd07854         266 RDLLPGVNPEALDFLEQILTFNPMDRLTAEEALMH  300 (342)
T ss_pred             HHHccCCCHHHHHHHHHHhCCCchhccCHHHHhCC
Confidence            0     11346789999999999999999999753


No 356
>PLN00009 cyclin-dependent kinase A; Provisional
Probab=99.91  E-value=1.1e-24  Score=174.88  Aligned_cols=166  Identities=23%  Similarity=0.290  Sum_probs=113.6

Q ss_pred             CCChHHHHHHHHHHHHHHhhhhcCCCCceEecCCCCCceEECC-CCCceEeeecceeecCCCCCCCcccccccccccCCc
Q 041793            6 ILDWPKRFHIICGTARGVMYLHQDSRLRIIHRDLKASNVLLDQ-DMNPKISDFGLARAFGGDEIEGNTNRVIGTYGYMAP   84 (224)
Q Consensus         6 ~l~~~~~~~i~~qi~~~l~~Lh~~~~~~i~H~dl~~~nil~~~-~~~~kl~df~~~~~~~~~~~~~~~~~~~~~~~y~aP   84 (224)
                      .+++..++.++.||+.||.|||+++   ++|+||+|+||+++. ++.++++|||++........  ......++..|+||
T Consensus        98 ~~~~~~~~~~~~qi~~aL~~LH~~~---i~H~dl~p~nill~~~~~~~kl~dfg~~~~~~~~~~--~~~~~~~~~~y~~P  172 (294)
T PLN00009         98 AKNPRLIKTYLYQILRGIAYCHSHR---VLHRDLKPQNLLIDRRTNALKLADFGLARAFGIPVR--TFTHEVVTLWYRAP  172 (294)
T ss_pred             CcCHHHHHHHHHHHHHHHHHHHhCC---eeCCCCCcceEEEECCCCEEEEcccccccccCCCcc--ccccCceeecccCH
Confidence            3578888999999999999999999   999999999999985 45689999999976533211  11223457789999


Q ss_pred             ccccCC-CcccccceEehhHHHHHHHhcccCCCCcCCCcccc-cccccCCC-ccc-------cC-----ccccCC----c
Q 041793           85 EYASDG-KFSVKSDVFSFGILLLEIISGKKNRGFYHSDNKLN-LIGHVSMP-SQL-------ID-----PCIQGS----F  145 (224)
Q Consensus        85 E~~~~~-~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~-~~~~~~~~-~~~-------~~-----~~~~~~----~  145 (224)
                      |.+.+. .++.++|+||||++++++++|..||......+... .......+ ...       .+     +.....    .
T Consensus       173 E~~~~~~~~~~~~Dv~slG~i~~~l~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  252 (294)
T PLN00009        173 EILLGSRHYSTPVDIWSVGCIFAEMVNQKPLFPGDSEIDELFKIFRILGTPNEETWPGVTSLPDYKSAFPKWPPKDLATV  252 (294)
T ss_pred             HHHhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCChhhccccccchhhhhhcccCCCCCHHHh
Confidence            988664 46889999999999999999999986432211100 00000000 000       00     000000    0


Q ss_pred             CHHHHHHHHHHHHHhccCCCCCCCChHHHHH
Q 041793          146 NLVEVIRCIHIGLLCVQQHPKDRPSMPSVIL  176 (224)
Q Consensus       146 ~~~~~~~~~~li~~cl~~dp~~Rps~~~v~~  176 (224)
                      .......+.+++.+||+.+|++||++.++++
T Consensus       253 ~~~~~~~~~~~i~~~l~~~P~~Rps~~~~l~  283 (294)
T PLN00009        253 VPTLEPAGVDLLSKMLRLDPSKRITARAALE  283 (294)
T ss_pred             CcCCChHHHHHHHHHccCChhhCcCHHHHhc
Confidence            0001134678999999999999999999976


No 357
>PLN00113 leucine-rich repeat receptor-like protein kinase; Provisional
Probab=99.91  E-value=2.6e-24  Score=197.87  Aligned_cols=169  Identities=24%  Similarity=0.463  Sum_probs=122.5

Q ss_pred             CCChHHHHHHHHHHHHHHhhhhcCCCCceEecCCCCCceEECCCCCceEeeecceeecCCCCCCCcccccccccccCCcc
Q 041793            6 ILDWPKRFHIICGTARGVMYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDEIEGNTNRVIGTYGYMAPE   85 (224)
Q Consensus         6 ~l~~~~~~~i~~qi~~~l~~Lh~~~~~~i~H~dl~~~nil~~~~~~~kl~df~~~~~~~~~~~~~~~~~~~~~~~y~aPE   85 (224)
                      .++|.++..++.||+.||+|||..+...|+|||+||+||+++.++..++. ++.......      .....++..|+|||
T Consensus       776 ~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiH~dlkp~Nil~~~~~~~~~~-~~~~~~~~~------~~~~~~t~~y~aPE  848 (968)
T PLN00113        776 NLSWERRRKIAIGIAKALRFLHCRCSPAVVVGNLSPEKIIIDGKDEPHLR-LSLPGLLCT------DTKCFISSAYVAPE  848 (968)
T ss_pred             cCCHHHHHHHHHHHHHHHHHhccCCCCCeecCCCCHHhEEECCCCceEEE-ecccccccc------CCCccccccccCcc
Confidence            47899999999999999999995432339999999999999988887764 554433211      11235678999999


Q ss_pred             cccCCCcccccceEehhHHHHHHHhcccCCCCcCCCccccccccc------CCCccccCcccc--CCcCHHHHHHHHHHH
Q 041793           86 YASDGKFSVKSDVFSFGILLLEIISGKKNRGFYHSDNKLNLIGHV------SMPSQLIDPCIQ--GSFNLVEVIRCIHIG  157 (224)
Q Consensus        86 ~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~------~~~~~~~~~~~~--~~~~~~~~~~~~~li  157 (224)
                      .+.+..++.++|||||||++|||++|+.||........ ......      .......++...  ...+..+...+.+++
T Consensus       849 ~~~~~~~~~~sDv~S~Gvvl~el~tg~~p~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~  927 (968)
T PLN00113        849 TRETKDITEKSDIYGFGLILIELLTGKSPADAEFGVHG-SIVEWARYCYSDCHLDMWIDPSIRGDVSVNQNEIVEVMNLA  927 (968)
T ss_pred             cccCCCCCcccchhhHHHHHHHHHhCCCCCCcccCCCC-cHHHHHHHhcCccchhheeCccccCCCCccHHHHHHHHHHH
Confidence            99988999999999999999999999999853221111 111000      001112222221  123445667788999


Q ss_pred             HHhccCCCCCCCChHHHHHHhccCC
Q 041793          158 LLCVQQHPKDRPSMPSVILMLGSEI  182 (224)
Q Consensus       158 ~~cl~~dp~~Rps~~~v~~~L~~~~  182 (224)
                      .+||+.||++||++++|++.|+...
T Consensus       928 ~~Cl~~~P~~RPt~~evl~~L~~~~  952 (968)
T PLN00113        928 LHCTATDPTARPCANDVLKTLESAS  952 (968)
T ss_pred             HhhCcCCchhCcCHHHHHHHHHHhh
Confidence            9999999999999999999998763


No 358
>cd07877 STKc_p38alpha_MAPK14 Catalytic domain of the Serine/Threonine Kinase, p38alpha Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), p38alpha subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38alpha subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38alpha, also called MAPK14
Probab=99.91  E-value=6.3e-25  Score=180.37  Aligned_cols=164  Identities=26%  Similarity=0.354  Sum_probs=117.3

Q ss_pred             CCCChHHHHHHHHHHHHHHhhhhcCCCCceEecCCCCCceEECCCCCceEeeecceeecCCCCCCCcccccccccccCCc
Q 041793            5 KILDWPKRFHIICGTARGVMYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDEIEGNTNRVIGTYGYMAP   84 (224)
Q Consensus         5 ~~l~~~~~~~i~~qi~~~l~~Lh~~~~~~i~H~dl~~~nil~~~~~~~kl~df~~~~~~~~~~~~~~~~~~~~~~~y~aP   84 (224)
                      +.+++..++.++.||+.||.|||+.|   ++|+||+|+||+++.++.++++|||++......     .....++..|+||
T Consensus       115 ~~l~~~~~~~i~~qi~~aL~~LH~~~---ivH~dlkp~NIll~~~~~~kl~dfg~~~~~~~~-----~~~~~~~~~y~aP  186 (345)
T cd07877         115 QKLTDDHVQFLIYQILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLARHTDDE-----MTGYVATRWYRAP  186 (345)
T ss_pred             CCCCHHHHHHHHHHHHHHHHHHHHCC---eeecCCChHHEEEcCCCCEEEeccccccccccc-----ccccccCCCccCH
Confidence            46899999999999999999999999   999999999999999999999999998754221     1223567789999


Q ss_pred             ccccC-CCcccccceEehhHHHHHHHhcccCCCCcCCCcccccc-cccCCC--------------------ccccCcccc
Q 041793           85 EYASD-GKFSVKSDVFSFGILLLEIISGKKNRGFYHSDNKLNLI-GHVSMP--------------------SQLIDPCIQ  142 (224)
Q Consensus        85 E~~~~-~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~-~~~~~~--------------------~~~~~~~~~  142 (224)
                      |.+.+ ..++.++|+||||++++++++|+.||...........+ ......                    .........
T Consensus       187 E~~~~~~~~~~~~DvwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  266 (345)
T cd07877         187 EIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQSLTQMPKMNFA  266 (345)
T ss_pred             HHHhCccCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCHHHHhhcccHhHHHHHHHhcccCCcchh
Confidence            98866 45788999999999999999999998543221110000 000000                    000000000


Q ss_pred             CCcCHHHHHHHHHHHHHhccCCCCCCCChHHHHHH
Q 041793          143 GSFNLVEVIRCIHIGLLCVQQHPKDRPSMPSVILM  177 (224)
Q Consensus       143 ~~~~~~~~~~~~~li~~cl~~dp~~Rps~~~v~~~  177 (224)
                      ... ......+.++|.+||+.||++||++.+++..
T Consensus       267 ~~~-~~~~~~~~~li~~~L~~dp~~R~t~~e~l~h  300 (345)
T cd07877         267 NVF-IGANPLAVDLLEKMLVLDSDKRITAAQALAH  300 (345)
T ss_pred             hhc-CCCCHHHHHHHHHHcCCChhhcCCHHHHhcC
Confidence            000 0012246789999999999999999998764


No 359
>cd08222 STKc_Nek11 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 11. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 11 (Nek11) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek11 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek11 is involved, through direct phosphorylation, in regulating the degradation of Cdc25A (Cell Division Cycle 25 homolog A), which plays a role in cell cycle progression and in activating cyclin dependent kinases. Nek11 is activated by CHK1 (CHeckpoint Kinase 1) and may be involved in the G2/M check
Probab=99.91  E-value=1.9e-24  Score=170.45  Aligned_cols=158  Identities=27%  Similarity=0.322  Sum_probs=118.1

Q ss_pred             CCCCCChHHHHHHHHHHHHHHhhhhcCCCCceEecCCCCCceEECCCCCceEeeecceeecCCCCCCCcccccccccccC
Q 041793            3 RCKILDWPKRFHIICGTARGVMYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDEIEGNTNRVIGTYGYM   82 (224)
Q Consensus         3 ~~~~l~~~~~~~i~~qi~~~l~~Lh~~~~~~i~H~dl~~~nil~~~~~~~kl~df~~~~~~~~~~~~~~~~~~~~~~~y~   82 (224)
                      ....+++.+++.++.|++.||.|||+.|   ++|+||+|+||+++. +.++++|||++........  ......++..|+
T Consensus        99 ~~~~~~~~~~~~~~~~l~~~l~~lH~~~---i~h~~l~~~nili~~-~~~~l~d~g~~~~~~~~~~--~~~~~~~~~~~~  172 (260)
T cd08222          99 TGKTLSENQVCEWFIQLLLGVHYMHQRR---ILHRDLKAKNIFLKN-NLLKIGDFGVSRLLMGSCD--LATTFTGTPYYM  172 (260)
T ss_pred             cccccCHHHHHHHHHHHHHHHHHHHHcC---ccccCCChhheEeec-CCEeecccCceeecCCCcc--cccCCCCCcCcc
Confidence            3467899999999999999999999999   999999999999975 5699999999876543221  112235677899


Q ss_pred             CcccccCCCcccccceEehhHHHHHHHhcccCCCCcCCCcccccccccCCCccccCccccCCcCHHHHHHHHHHHHHhcc
Q 041793           83 APEYASDGKFSVKSDVFSFGILLLEIISGKKNRGFYHSDNKLNLIGHVSMPSQLIDPCIQGSFNLVEVIRCIHIGLLCVQ  162 (224)
Q Consensus        83 aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~  162 (224)
                      +||.+.+..++.++|+||||++++++++|..||......   ........ ..  .+...    ......+.++|.+||.
T Consensus       173 ~pe~~~~~~~~~~~Dv~slG~~~~~l~~~~~~~~~~~~~---~~~~~~~~-~~--~~~~~----~~~~~~~~~li~~~l~  242 (260)
T cd08222         173 SPEALKHQGYDSKSDIWSLGCILYEMCCLAHAFEGQNFL---SVVLRIVE-GP--TPSLP----ETYSRQLNSIMQSMLN  242 (260)
T ss_pred             CHHHHccCCCCchhhHHHHHHHHHHHHhCCCCCCCccHH---HHHHHHHc-CC--CCCCc----chhcHHHHHHHHHHhc
Confidence            999988888889999999999999999999997532211   11111100 00  11111    1112356788999999


Q ss_pred             CCCCCCCChHHHHH
Q 041793          163 QHPKDRPSMPSVIL  176 (224)
Q Consensus       163 ~dp~~Rps~~~v~~  176 (224)
                      .+|++||++.++++
T Consensus       243 ~~p~~Rp~~~~il~  256 (260)
T cd08222         243 KDPSLRPSAAEILR  256 (260)
T ss_pred             CChhhCcCHHHHhh
Confidence            99999999999975


No 360
>KOG0669 consensus Cyclin T-dependent kinase CDK9 [Cell cycle control, cell division, chromosome partitioning]
Probab=99.91  E-value=5.2e-25  Score=166.32  Aligned_cols=172  Identities=22%  Similarity=0.346  Sum_probs=123.7

Q ss_pred             CCCCCChHHHHHHHHHHHHHHhhhhcCCCCceEecCCCCCceEECCCCCceEeeecceeecCCCCC--CCcccccccccc
Q 041793            3 RCKILDWPKRFHIICGTARGVMYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDEI--EGNTNRVIGTYG   80 (224)
Q Consensus         3 ~~~~l~~~~~~~i~~qi~~~l~~Lh~~~~~~i~H~dl~~~nil~~~~~~~kl~df~~~~~~~~~~~--~~~~~~~~~~~~   80 (224)
                      ....++..++.+++.+++.||.|+|...   |+|||+|+.|++|+.+|.++|+|||+++.+.....  ....+..+-|.+
T Consensus       117 ~~vr~sls~Ikk~Mk~Lm~GL~~iHr~k---ilHRDmKaaNvLIt~dgilklADFGlar~fs~~~n~~kprytnrvvTLw  193 (376)
T KOG0669|consen  117 RKVRFSLSEIKKVMKGLMNGLYYIHRNK---ILHRDMKAANVLITKDGILKLADFGLARAFSTSKNVVKPRYTNRVVTLW  193 (376)
T ss_pred             ccccccHHHHHHHHHHHHHHHHHHHHhh---HHhhcccHhhEEEcCCceEEeeccccccceecccccCCCCcccceeeee
Confidence            4467899999999999999999999998   99999999999999999999999999987654322  222333455889


Q ss_pred             cCCcccccCC-CcccccceEehhHHHHHHHhcccCCCCcCCCccccccccc--------C-------CCccc-cCccccC
Q 041793           81 YMAPEYASDG-KFSVKSDVFSFGILLLEIISGKKNRGFYHSDNKLNLIGHV--------S-------MPSQL-IDPCIQG  143 (224)
Q Consensus        81 y~aPE~~~~~-~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~--------~-------~~~~~-~~~~~~~  143 (224)
                      |++||.+.|. .++++.|+|+.||++.+|+++.+.+++-........+...        +       ..+.+ .++-...
T Consensus       194 YrppEllLG~r~yg~~iDiWgAgCimaeMwtrspimqgnteqqql~~Is~LcGs~tkevWP~~d~lpL~~sie~ePl~~~  273 (376)
T KOG0669|consen  194 YRPPELLLGDREYGPPIDIWGAGCIMAEMWTRSPIMQGNTEQQQLHLISQLCGSITKEVWPNVDNLPLYQSIELEPLPKG  273 (376)
T ss_pred             cCCHHHhhcccccCCcchhHhHHHHHHHHHccCccccCChHHHHHHHHHHHhccCCcccCCCcccchHHHhccCCCCCcc
Confidence            9999999875 5789999999999999999998887654433332222111        0       00000 0000000


Q ss_pred             CcC-HH-------HHHHHHHHHHHhccCCCCCCCChHHHHHH
Q 041793          144 SFN-LV-------EVIRCIHIGLLCVQQHPKDRPSMPSVILM  177 (224)
Q Consensus       144 ~~~-~~-------~~~~~~~li~~cl~~dp~~Rps~~~v~~~  177 (224)
                      ... .+       .....++|+..++..||.+|+.+.+++..
T Consensus       274 ~~rkv~n~~kp~~kd~~a~dLle~ll~~DP~kR~~ad~alnh  315 (376)
T KOG0669|consen  274 QKRKVKNRLKPYVKDDEALDLLEKLLKLDPTKRIDADQALNH  315 (376)
T ss_pred             hhhhhhhhcccccCChhHHHHHHHHhccCcccCcchHhhhch
Confidence            000 00       01245688889999999999999998764


No 361
>PLN03225 Serine/threonine-protein kinase SNT7; Provisional
Probab=99.91  E-value=1.1e-24  Score=188.60  Aligned_cols=164  Identities=16%  Similarity=0.131  Sum_probs=105.7

Q ss_pred             hHHHHHHHHHHHHHHhhhhcCCCCceEecCCCCCceEECC-CCCceEeeecceeecCCCCCCCcccccccccccCCcccc
Q 041793            9 WPKRFHIICGTARGVMYLHQDSRLRIIHRDLKASNVLLDQ-DMNPKISDFGLARAFGGDEIEGNTNRVIGTYGYMAPEYA   87 (224)
Q Consensus         9 ~~~~~~i~~qi~~~l~~Lh~~~~~~i~H~dl~~~nil~~~-~~~~kl~df~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~   87 (224)
                      ...+..++.||+.||.|||+.+   |+||||||+||+++. ++.+||+|||++........ .......+++.|+|||.+
T Consensus       254 ~~~i~~i~~qll~aL~yLH~~g---IiHRDLKP~NILl~~~~~~~KL~DFGlA~~l~~~~~-~~~~~~~~t~~Y~APE~~  329 (566)
T PLN03225        254 NKIIQTIMRQILFALDGLHSTG---IVHRDVKPQNIIFSEGSGSFKIIDLGAAADLRVGIN-YIPKEFLLDPRYAAPEQY  329 (566)
T ss_pred             HHHHHHHHHHHHHHHHHHHHCC---EEeCcCCHHHEEEeCCCCcEEEEeCCCccccccccc-cCCcccccCCCccChHHh
Confidence            3456689999999999999999   999999999999985 68899999999976533221 122335678899999965


Q ss_pred             cCC----------------------CcccccceEehhHHHHHHHhcccCCCCcCCCcccccccccCC--------Ccccc
Q 041793           88 SDG----------------------KFSVKSDVFSFGILLLEIISGKKNRGFYHSDNKLNLIGHVSM--------PSQLI  137 (224)
Q Consensus        88 ~~~----------------------~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~--------~~~~~  137 (224)
                      ...                      .++.++|||||||++|+|+++..++...... ....+.....        .....
T Consensus       330 ~~~~~~~~~~~~~~~~~~sp~l~~~~~~~k~DVwSlGviL~el~~~~~~~~~~~~~-~~~~l~~~~~~~~~~~~~~~~~~  408 (566)
T PLN03225        330 IMSTQTPSAPSAPVATALSPVLWQLNLPDRFDIYSAGLIFLQMAFPNLRSDSNLIQ-FNRQLKRNDYDLVAWRKLVEPRA  408 (566)
T ss_pred             hccCCCCCCccccccccccchhccccCCCCcccHHHHHHHHHHHhCcCCCchHHHH-HHHHHHhcCCcHHHHHHhhcccc
Confidence            322                      2334669999999999999876553211000 0000000000        00000


Q ss_pred             CccccCCcCHH--HHHHHHHHHHHhccCCCCCCCChHHHHHH
Q 041793          138 DPCIQGSFNLV--EVIRCIHIGLLCVQQHPKDRPSMPSVILM  177 (224)
Q Consensus       138 ~~~~~~~~~~~--~~~~~~~li~~cl~~dp~~Rps~~~v~~~  177 (224)
                      .+......+..  +.....+|+.+||+.||++|||++++++.
T Consensus       409 ~~~~~~~~~~~d~~~~~~~dLi~~mL~~dP~kR~ta~e~L~H  450 (566)
T PLN03225        409 SPDLRRGFEVLDLDGGAGWELLKSMMRFKGRQRISAKAALAH  450 (566)
T ss_pred             chhhhhhhhhccccchHHHHHHHHHccCCcccCCCHHHHhCC
Confidence            00000000000  01234579999999999999999999874


No 362
>cd07856 STKc_Sty1_Hog1 Catalytic domain of the Serine/Threonine Kinases, Fungal Mitogen-Activated Protein Kinases Sty1 and Hog1. Serine/Threonine Kinases (STKs), Fungal Mitogen-Activated Protein Kinase (MAPK) Sty1/Hog1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sty1/Hog1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the MAPKs Sty1 from Schizosaccharomyces pombe, Hog1 from Saccharomyces cerevisiae, and similar proteins. MAPKs are important mediators of cellular responses to extracellular signals. Sty1 and Hog1 are stress-activated MAPKs that partipate in transcriptional regulation in response to stress. Sty1 is activated in response to oxidative stress, osmotic stress, and U
Probab=99.91  E-value=1.9e-24  Score=176.34  Aligned_cols=165  Identities=24%  Similarity=0.330  Sum_probs=116.8

Q ss_pred             CCCChHHHHHHHHHHHHHHhhhhcCCCCceEecCCCCCceEECCCCCceEeeecceeecCCCCCCCcccccccccccCCc
Q 041793            5 KILDWPKRFHIICGTARGVMYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDEIEGNTNRVIGTYGYMAP   84 (224)
Q Consensus         5 ~~l~~~~~~~i~~qi~~~l~~Lh~~~~~~i~H~dl~~~nil~~~~~~~kl~df~~~~~~~~~~~~~~~~~~~~~~~y~aP   84 (224)
                      ..+++..+..++.||+.||.|||+.+   ++|+||+|.||+++.++.++++|||.+......     .....++..|++|
T Consensus       103 ~~~~~~~~~~~~~ql~~aL~~LH~~~---iiH~dl~p~Nili~~~~~~~l~dfg~~~~~~~~-----~~~~~~~~~y~aP  174 (328)
T cd07856         103 RPLEKQFIQYFLYQILRGLKYVHSAG---VVHRDLKPSNILINENCDLKICDFGLARIQDPQ-----MTGYVSTRYYRAP  174 (328)
T ss_pred             CCCCHHHHHHHHHHHHHHHHHHHhCC---cccCCCCHHHEeECCCCCEEeCccccccccCCC-----cCCCcccccccCc
Confidence            46788889999999999999999999   999999999999999999999999998754221     1223557789999


Q ss_pred             ccccC-CCcccccceEehhHHHHHHHhcccCCCCcCCCccccccc------------ccCCC--ccc-cCccccCCcCHH
Q 041793           85 EYASD-GKFSVKSDVFSFGILLLEIISGKKNRGFYHSDNKLNLIG------------HVSMP--SQL-IDPCIQGSFNLV  148 (224)
Q Consensus        85 E~~~~-~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~------------~~~~~--~~~-~~~~~~~~~~~~  148 (224)
                      |.+.+ ..++.++|+||||++++++++|+.||...........+.            .....  ... ............
T Consensus       175 E~~~~~~~~~~~~Dv~slG~il~el~tg~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  254 (328)
T cd07856         175 EIMLTWQKYDVEVDIWSAGCIFAEMLEGKPLFPGKDHVNQFSIITDLLGTPPDDVINTICSENTLRFVQSLPKREPVPFS  254 (328)
T ss_pred             eeeeccCCcCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCHHHHHhccchhhHHHHhhccccCCCcHH
Confidence            98765 467899999999999999999999985433211100000            00000  000 000000000100


Q ss_pred             -----HHHHHHHHHHHhccCCCCCCCChHHHHHH
Q 041793          149 -----EVIRCIHIGLLCVQQHPKDRPSMPSVILM  177 (224)
Q Consensus       149 -----~~~~~~~li~~cl~~dp~~Rps~~~v~~~  177 (224)
                           ....+.++|.+||+.+|++||++++++..
T Consensus       255 ~~~~~~~~~~~~li~~~l~~~P~~R~t~~ell~~  288 (328)
T cd07856         255 EKFKNADPSAIDLLEKMLVFDPQKRISAAEALAH  288 (328)
T ss_pred             HHcCCCCHHHHHHHHHHcCCChhhCCCHHHHhcC
Confidence                 11356789999999999999999998665


No 363
>KOG0577 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.91  E-value=1.2e-24  Score=180.89  Aligned_cols=155  Identities=30%  Similarity=0.441  Sum_probs=124.6

Q ss_pred             CCCCChHHHHHHHHHHHHHHhhhhcCCCCceEecCCCCCceEECCCCCceEeeecceeecCCCCCCCcccccccccccCC
Q 041793            4 CKILDWPKRFHIICGTARGVMYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDEIEGNTNRVIGTYGYMA   83 (224)
Q Consensus         4 ~~~l~~~~~~~i~~qi~~~l~~Lh~~~~~~i~H~dl~~~nil~~~~~~~kl~df~~~~~~~~~~~~~~~~~~~~~~~y~a   83 (224)
                      +++|.+..+..|..+.+.||+|||+.+   -+|||||+-||++...|.+||+|||.+....      ....++||+.|+|
T Consensus       120 kKplqEvEIAAi~~gaL~gLaYLHS~~---~IHRDiKAGNILLse~g~VKLaDFGSAsi~~------PAnsFvGTPywMA  190 (948)
T KOG0577|consen  120 KKPLQEVEIAAITHGALQGLAYLHSHN---RIHRDIKAGNILLSEPGLVKLADFGSASIMA------PANSFVGTPYWMA  190 (948)
T ss_pred             hccchHHHHHHHHHHHHHHHHHHHHhh---HHhhhccccceEecCCCeeeeccccchhhcC------chhcccCCccccc
Confidence            578999999999999999999999999   9999999999999999999999999997643      2456899999999


Q ss_pred             ccccc---CCCcccccceEehhHHHHHHHhcccCCCCcCCCcccccccccCCCccccCccccCCcCHHHHHHHHHHHHHh
Q 041793           84 PEYAS---DGKFSVKSDVFSFGILLLEIISGKKNRGFYHSDNKLNLIGHVSMPSQLIDPCIQGSFNLVEVIRCIHIGLLC  160 (224)
Q Consensus        84 PE~~~---~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~c  160 (224)
                      ||++.   .+.|+.++||||||+...||...++|.   ...+....+-++....   .+.+...-+..   .+.+++-.|
T Consensus       191 PEVILAMDEGqYdgkvDvWSLGITCIELAERkPPl---FnMNAMSALYHIAQNe---sPtLqs~eWS~---~F~~Fvd~C  261 (948)
T KOG0577|consen  191 PEVILAMDEGQYDGKVDVWSLGITCIELAERKPPL---FNMNAMSALYHIAQNE---SPTLQSNEWSD---YFRNFVDSC  261 (948)
T ss_pred             hhHheeccccccCCccceeeccchhhhhhhcCCCc---cCchHHHHHHHHHhcC---CCCCCCchhHH---HHHHHHHHH
Confidence            99875   467999999999999999999999994   3444444333333211   12222333333   356677799


Q ss_pred             ccCCCCCCCChHHHHH
Q 041793          161 VQQHPKDRPSMPSVIL  176 (224)
Q Consensus       161 l~~dp~~Rps~~~v~~  176 (224)
                      |+.-|..|||.+++++
T Consensus       262 LqKipqeRptse~ll~  277 (948)
T KOG0577|consen  262 LQKIPQERPTSEELLK  277 (948)
T ss_pred             HhhCcccCCcHHHHhh
Confidence            9999999999999876


No 364
>PTZ00024 cyclin-dependent protein kinase; Provisional
Probab=99.91  E-value=4.6e-24  Score=174.44  Aligned_cols=170  Identities=22%  Similarity=0.275  Sum_probs=118.7

Q ss_pred             CCCCChHHHHHHHHHHHHHHhhhhcCCCCceEecCCCCCceEECCCCCceEeeecceeecCCCCC------------CCc
Q 041793            4 CKILDWPKRFHIICGTARGVMYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDEI------------EGN   71 (224)
Q Consensus         4 ~~~l~~~~~~~i~~qi~~~l~~Lh~~~~~~i~H~dl~~~nil~~~~~~~kl~df~~~~~~~~~~~------------~~~   71 (224)
                      ...+++...+.++.||+.||+|||+.|   ++|+||+++||+++.++.++++|||.+........            ...
T Consensus       113 ~~~~~~~~~~~~~~ql~~aL~~LH~~~---i~H~dl~~~nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~  189 (335)
T PTZ00024        113 KIRLTESQVKCILLQILNGLNVLHKWY---FMHRDLSPANIFINSKGICKIADFGLARRYGYPPYSDTLSKDETMQRREE  189 (335)
T ss_pred             cCCCCHHHHHHHHHHHHHHHHHHHhCC---eecccccHHHeEECCCCCEEECCccceeeccccccccccccccccccccc
Confidence            456899999999999999999999999   99999999999999999999999999986541110            001


Q ss_pred             ccccccccccCCcccccCCC-cccccceEehhHHHHHHHhcccCCCCcCCCcccc-cccccCCCcc--------------
Q 041793           72 TNRVIGTYGYMAPEYASDGK-FSVKSDVFSFGILLLEIISGKKNRGFYHSDNKLN-LIGHVSMPSQ--------------  135 (224)
Q Consensus        72 ~~~~~~~~~y~aPE~~~~~~-~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~-~~~~~~~~~~--------------  135 (224)
                      .....++..|+|||.+.+.. ++.++|+||||++++++++|+.||.......... +......+..              
T Consensus       190 ~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~  269 (335)
T PTZ00024        190 MTSKVVTLWYRAPELLMGAEKYHFAVDMWSVGCIFAELLTGKPLFPGENEIDQLGRIFELLGTPNEDNWPQAKKLPLYTE  269 (335)
T ss_pred             ccccccccCCCCChhcccCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCchhhCcchhhcccccc
Confidence            11123466899999987643 6889999999999999999999986443221110 0000000000              


Q ss_pred             ---ccCccccCCcCHHHHHHHHHHHHHhccCCCCCCCChHHHHHH
Q 041793          136 ---LIDPCIQGSFNLVEVIRCIHIGLLCVQQHPKDRPSMPSVILM  177 (224)
Q Consensus       136 ---~~~~~~~~~~~~~~~~~~~~li~~cl~~dp~~Rps~~~v~~~  177 (224)
                         ........... .....+.+++.+||+.||++||++++++..
T Consensus       270 ~~~~~~~~~~~~~~-~~~~~~~~li~~~l~~~P~~R~s~~~~l~~  313 (335)
T PTZ00024        270 FTPRKPKDLKTIFP-NASDDAIDLLQSLLKLNPLERISAKEALKH  313 (335)
T ss_pred             cCcCCcccHHHhCc-CCChHHHHHHHHHcCCCchhccCHHHHhcC
Confidence               00000000000 012346789999999999999999999764


No 365
>KOG0200 consensus Fibroblast/platelet-derived growth factor receptor and related receptor tyrosine kinases [Signal transduction mechanisms]
Probab=99.91  E-value=2.9e-24  Score=187.57  Aligned_cols=164  Identities=29%  Similarity=0.402  Sum_probs=122.4

Q ss_pred             CCChHHHHHHHHHHHHHHhhhhcCCCCceEecCCCCCceEECCCCCceEeeecceeecCCCCCCCccccc-ccccccCCc
Q 041793            6 ILDWPKRFHIICGTARGVMYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDEIEGNTNRV-IGTYGYMAP   84 (224)
Q Consensus         6 ~l~~~~~~~i~~qi~~~l~~Lh~~~~~~i~H~dl~~~nil~~~~~~~kl~df~~~~~~~~~~~~~~~~~~-~~~~~y~aP   84 (224)
                      .|+....+.++.||+.|++||++..   ++||||...||++..+..+|++|||+++.............. .-+..|+||
T Consensus       414 ~L~~~dLlsfa~QIa~GMe~L~~~~---~vHRDLAaRNVLi~~~~~~kIaDFGlar~~~~~~~y~~~~~~~~LP~kWmAp  490 (609)
T KOG0200|consen  414 ALTTKDLLSFAYQIANGMEYLASVP---CVHRDLAARNVLITKNKVIKIADFGLARDHYNKDYYRTKSSAGTLPVKWMAP  490 (609)
T ss_pred             CcCHHHHHHHHHHHHHHHHHHhhCC---ccchhhhhhhEEecCCCEEEEccccceeccCCCCceEecCCCCccceeecCH
Confidence            4899999999999999999999998   999999999999999999999999999865432211111100 024569999


Q ss_pred             ccccCCCcccccceEehhHHHHHHHh-cccCCCCcCCCcccccccccCCCccccCccccCCcCHHHHHHHHHHHHHhccC
Q 041793           85 EYASDGKFSVKSDVFSFGILLLEIIS-GKKNRGFYHSDNKLNLIGHVSMPSQLIDPCIQGSFNLVEVIRCIHIGLLCVQQ  163 (224)
Q Consensus        85 E~~~~~~~~~~~Di~slG~il~~l~~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~  163 (224)
                      |.+....++.++||||||+++||+++ |..||.......  .+.........+..+    ....   ..+.++|+.||+.
T Consensus       491 Esl~~~~ft~kSDVWSfGI~L~EifsLG~~PYp~~~~~~--~l~~~l~~G~r~~~P----~~c~---~eiY~iM~~CW~~  561 (609)
T KOG0200|consen  491 ESLFDRVFTSKSDVWSFGILLWEIFTLGGTPYPGIPPTE--ELLEFLKEGNRMEQP----EHCS---DEIYDLMKSCWNA  561 (609)
T ss_pred             HHhccCcccccchhhHHHHHHHHHhhCCCCCCCCCCcHH--HHHHHHhcCCCCCCC----CCCC---HHHHHHHHHHhCC
Confidence            99999999999999999999999987 777875522111  112222211121111    1111   2356889999999


Q ss_pred             CCCCCCChHHHHHHhccC
Q 041793          164 HPKDRPSMPSVILMLGSE  181 (224)
Q Consensus       164 dp~~Rps~~~v~~~L~~~  181 (224)
                      +|++||++.++.+.++..
T Consensus       562 ~p~~RP~F~~~~~~~~~~  579 (609)
T KOG0200|consen  562 DPEDRPTFSECVEFFEKH  579 (609)
T ss_pred             CcccCCCHHHHHHHHHHH
Confidence            999999999999999873


No 366
>KOG0665 consensus Jun-N-terminal kinase (JNK) [Signal transduction mechanisms]
Probab=99.91  E-value=2e-24  Score=167.64  Aligned_cols=165  Identities=25%  Similarity=0.262  Sum_probs=120.8

Q ss_pred             CChHHHHHHHHHHHHHHhhhhcCCCCceEecCCCCCceEECCCCCceEeeecceeecCCCCCCCcccccccccccCCccc
Q 041793            7 LDWPKRFHIICGTARGVMYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDEIEGNTNRVIGTYGYMAPEY   86 (224)
Q Consensus         7 l~~~~~~~i~~qi~~~l~~Lh~~~~~~i~H~dl~~~nil~~~~~~~kl~df~~~~~~~~~~~~~~~~~~~~~~~y~aPE~   86 (224)
                      ++.+++-.++.|++.|++|||+.|   |+||||||+||++..++.+|+.|||+++.....   ...+-++.+..|+|||+
T Consensus       115 lDH~tis~i~yq~~~~ik~lhs~~---IihRdLkPsnivv~~~~~lKi~dfg~ar~e~~~---~~mtpyVvtRyyrapev  188 (369)
T KOG0665|consen  115 LDHETISYILYQMLCGIKHLHSAG---IIHRDLKPSNIVVNSDCTLKILDFGLARTEDTD---FMMTPYVVTRYYRAPEV  188 (369)
T ss_pred             cchHHHHHHHHHHHHHHHHHHhcc---eeecccCcccceecchhheeeccchhhcccCcc---cccCchhheeeccCchh
Confidence            566788899999999999999999   999999999999999999999999999864322   22333566778999999


Q ss_pred             ccCCCcccccceEehhHHHHHHHhcccCCCCcCCCccccc-ccccC----------------------------CCcccc
Q 041793           87 ASDGKFSVKSDVFSFGILLLEIISGKKNRGFYHSDNKLNL-IGHVS----------------------------MPSQLI  137 (224)
Q Consensus        87 ~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~-~~~~~----------------------------~~~~~~  137 (224)
                      +.+..+...+||||+||++.||+.|+.-|.+..-.+.... .....                            ....++
T Consensus       189 il~~~~ke~vdiwSvGci~gEli~~~Vlf~g~d~idQ~~ki~~~lgtpd~~F~~qL~~~~r~yv~~~~~y~~~~f~~~fp  268 (369)
T KOG0665|consen  189 ILGMGYKENVDIWSVGCIMGELILGTVLFPGKDHIDQWNKIIEQLGTPDPSFMKQLQPTVRNYVENRPQYQAISFSELFP  268 (369)
T ss_pred             eeccCCcccchhhhhhhHHHHHhhceEEecCchHHHHHHHHHHHhcCCCHHHHHHhhHHHHHHhhcChHhhccchhhhCC
Confidence            9999999999999999999999999887754321111100 00000                            111111


Q ss_pred             CccccC--CcCHHHHHHHHHHHHHhccCCCCCCCChHHHHHH
Q 041793          138 DPCIQG--SFNLVEVIRCIHIGLLCVQQHPKDRPSMPSVILM  177 (224)
Q Consensus       138 ~~~~~~--~~~~~~~~~~~~li~~cl~~dp~~Rps~~~v~~~  177 (224)
                      |.....  ..+..+...+.+++.+||..||++|.|++++++.
T Consensus       269 D~~f~~~~e~~~~~~~~ardll~~MLvi~pe~Risv~daL~H  310 (369)
T KOG0665|consen  269 DSLFPVVLEGSKLDCSLARDLLSKMLVIDPEKRISVDDALRH  310 (369)
T ss_pred             cccccccccCCccchHHHHHHHHHhhccChhhcccHHHHhcC
Confidence            211111  1112233455689999999999999999999875


No 367
>KOG0574 consensus STE20-like serine/threonine kinase MST [Signal transduction mechanisms]
Probab=99.91  E-value=2.2e-25  Score=172.30  Aligned_cols=162  Identities=28%  Similarity=0.391  Sum_probs=128.2

Q ss_pred             CCCCCCChHHHHHHHHHHHHHHhhhhcCCCCceEecCCCCCceEECCCCCceEeeecceeecCCCCCCCccccccccccc
Q 041793            2 ERCKILDWPKRFHIICGTARGVMYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDEIEGNTNRVIGTYGY   81 (224)
Q Consensus         2 ~~~~~l~~~~~~~i~~qi~~~l~~Lh~~~~~~i~H~dl~~~nil~~~~~~~kl~df~~~~~~~~~~~~~~~~~~~~~~~y   81 (224)
                      -++++|++.++..++.+.+.||.|||...   -+|||||+-||++..+|..||+|||++..+.+....  -.+..|++.|
T Consensus       121 ~R~K~L~E~EIs~iL~~TLKGL~YLH~~~---KIHRDIKAGNILLNT~G~AKLADFGVAGQLTDTMAK--RNTVIGTPFW  195 (502)
T KOG0574|consen  121 ARRKPLSEQEISAVLRDTLKGLQYLHDLK---KIHRDIKAGNILLNTDGIAKLADFGVAGQLTDTMAK--RNTVIGTPFW  195 (502)
T ss_pred             HhcCCccHHHHHHHHHHHHhHHHHHHHHH---HHHhhcccccEEEcccchhhhhhccccchhhhhHHh--hCccccCccc
Confidence            36899999999999999999999999998   899999999999999999999999999876432211  2346789999


Q ss_pred             CCcccccCCCcccccceEehhHHHHHHHhcccCCCCcCCCcccccccccCCCccccCccc-cCCcCHHHHHHHHHHHHHh
Q 041793           82 MAPEYASDGKFSVKSDVFSFGILLLEIISGKKNRGFYHSDNKLNLIGHVSMPSQLIDPCI-QGSFNLVEVIRCIHIGLLC  160 (224)
Q Consensus        82 ~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~li~~c  160 (224)
                      +|||++..-+|+.++||||||+...||..|++||...++....-.+.     .. +++.. ....+   ...+-+++++|
T Consensus       196 MAPEVI~EIGY~~~ADIWSLGITaIEMAEG~PPYsDIHPMRAIFMIP-----T~-PPPTF~KPE~W---S~~F~DFi~~C  266 (502)
T KOG0574|consen  196 MAPEVIEEIGYDTKADIWSLGITAIEMAEGRPPYSDIHPMRAIFMIP-----TK-PPPTFKKPEEW---SSEFNDFIRSC  266 (502)
T ss_pred             ccHHHHHHhccchhhhHhhhcchhhhhhcCCCCcccccccceeEecc-----CC-CCCCCCChHhh---hhHHHHHHHHH
Confidence            99999999999999999999999999999999987655543322221     11 11111 11111   23466788899


Q ss_pred             ccCCCCCCCChHHHHHH
Q 041793          161 VQQHPKDRPSMPSVILM  177 (224)
Q Consensus       161 l~~dp~~Rps~~~v~~~  177 (224)
                      |-..|++|-++.++++.
T Consensus       267 LiK~PE~R~TA~~L~~H  283 (502)
T KOG0574|consen  267 LIKKPEERKTALRLCEH  283 (502)
T ss_pred             hcCCHHHHHHHHHHhhh
Confidence            99999999999988874


No 368
>KOG0580 consensus Serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=99.90  E-value=2.2e-24  Score=161.44  Aligned_cols=158  Identities=22%  Similarity=0.291  Sum_probs=123.7

Q ss_pred             CCCCCCChHHHHHHHHHHHHHHhhhhcCCCCceEecCCCCCceEECCCCCceEeeecceeecCCCCCCCccccccccccc
Q 041793            2 ERCKILDWPKRFHIICGTARGVMYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDEIEGNTNRVIGTYGY   81 (224)
Q Consensus         2 ~~~~~l~~~~~~~i~~qi~~~l~~Lh~~~~~~i~H~dl~~~nil~~~~~~~kl~df~~~~~~~~~~~~~~~~~~~~~~~y   81 (224)
                      .+.+.+++...+.++.|++.||.|+|..+   ++||||||+|+|++..+..|++|||-+......   . -.+.-||.-|
T Consensus       116 ~~~~~f~e~~~a~Yi~q~A~Al~y~h~k~---VIhRdiKpenlLlg~~~~lkiAdfGwsV~~p~~---k-R~tlcgt~dy  188 (281)
T KOG0580|consen  116 GRMKRFDEQRAATYIKQLANALLYCHLKR---VIHRDIKPENLLLGSAGELKIADFGWSVHAPSN---K-RKTLCGTLDY  188 (281)
T ss_pred             cccccccccchhHHHHHHHHHHHHhccCC---cccCCCCHHHhccCCCCCeeccCCCceeecCCC---C-ceeeeccccc
Confidence            35678999999999999999999999999   999999999999999999999999987653321   1 2234678999


Q ss_pred             CCcccccCCCcccccceEehhHHHHHHHhcccCCCCcCCCcccccccccCCCccccCccccCCcCHHHHHHHHHHHHHhc
Q 041793           82 MAPEYASDGKFSVKSDVFSFGILLLEIISGKKNRGFYHSDNKLNLIGHVSMPSQLIDPCIQGSFNLVEVIRCIHIGLLCV  161 (224)
Q Consensus        82 ~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl  161 (224)
                      ++||...+...+.+.|+|++|++.||++.|.+||....   .......+.......+.    ...    ..+.++|.+|+
T Consensus       189 l~pEmv~~~~hd~~Vd~w~lgvl~yeflvg~ppFes~~---~~etYkrI~k~~~~~p~----~is----~~a~dlI~~ll  257 (281)
T KOG0580|consen  189 LPPEMVEGRGHDKFVDLWSLGVLCYEFLVGLPPFESQS---HSETYKRIRKVDLKFPS----TIS----GGAADLISRLL  257 (281)
T ss_pred             CCHhhcCCCCccchhhHHHHHHHHHHHHhcCCchhhhh---hHHHHHHHHHccccCCc----ccC----hhHHHHHHHHh
Confidence            99999999999999999999999999999999986433   22222222211111111    111    23568889999


Q ss_pred             cCCCCCCCChHHHHHH
Q 041793          162 QQHPKDRPSMPSVILM  177 (224)
Q Consensus       162 ~~dp~~Rps~~~v~~~  177 (224)
                      ..+|.+|....+++..
T Consensus       258 ~~~p~~r~~l~~v~~h  273 (281)
T KOG0580|consen  258 VKNPIERLALTEVMDH  273 (281)
T ss_pred             ccCccccccHHHHhhh
Confidence            9999999999999763


No 369
>cd07880 STKc_p38gamma_MAPK12 Catalytic domain of the Serine/Threonine Kinase, p38gamma Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), p38gamma subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38gamma subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38gamma, also called MAPK12
Probab=99.90  E-value=4.3e-24  Score=175.29  Aligned_cols=164  Identities=21%  Similarity=0.276  Sum_probs=116.6

Q ss_pred             CCCChHHHHHHHHHHHHHHhhhhcCCCCceEecCCCCCceEECCCCCceEeeecceeecCCCCCCCcccccccccccCCc
Q 041793            5 KILDWPKRFHIICGTARGVMYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDEIEGNTNRVIGTYGYMAP   84 (224)
Q Consensus         5 ~~l~~~~~~~i~~qi~~~l~~Lh~~~~~~i~H~dl~~~nil~~~~~~~kl~df~~~~~~~~~~~~~~~~~~~~~~~y~aP   84 (224)
                      +.+++..++.++.||+.||.|||+.|   |+|+||+|+||+++.++.++++|||++......     .....++..|++|
T Consensus       113 ~~l~~~~~~~i~~qi~~al~~LH~~g---i~H~dlkp~Nill~~~~~~kl~dfg~~~~~~~~-----~~~~~~~~~y~aP  184 (343)
T cd07880         113 EKLSEDRIQFLVYQMLKGLKYIHAAG---IIHRDLKPGNLAVNEDCELKILDFGLARQTDSE-----MTGYVVTRWYRAP  184 (343)
T ss_pred             CCCCHHHHHHHHHHHHHHHHHHHhCC---eecCCCCHHHEEEcCCCCEEEeecccccccccC-----ccccccCCcccCH
Confidence            57899999999999999999999999   999999999999999999999999998764321     1223457789999


Q ss_pred             ccccC-CCcccccceEehhHHHHHHHhcccCCCCcCCCcccc-cccccCC-C----------------ccccCccccCC-
Q 041793           85 EYASD-GKFSVKSDVFSFGILLLEIISGKKNRGFYHSDNKLN-LIGHVSM-P----------------SQLIDPCIQGS-  144 (224)
Q Consensus        85 E~~~~-~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~-~~~~~~~-~----------------~~~~~~~~~~~-  144 (224)
                      |.+.+ ..++.++|+||||++++++++|..||.......... ....... +                ........... 
T Consensus       185 E~~~~~~~~~~~~Di~slG~ll~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  264 (343)
T cd07880         185 EVILNWMHYTQTVDIWSVGCIMAEMLTGKPLFKGHDHLDQLMEIMKVTGTPSKEFVQKLQSEDAKNYVKKLPRFRKKDFR  264 (343)
T ss_pred             HHHhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCCCCHHHHHhhcchhHHHHHHhccccCcchHH
Confidence            98865 357899999999999999999999986432111000 0000000 0                00000000000 


Q ss_pred             -cCHHHHHHHHHHHHHhccCCCCCCCChHHHHH
Q 041793          145 -FNLVEVIRCIHIGLLCVQQHPKDRPSMPSVIL  176 (224)
Q Consensus       145 -~~~~~~~~~~~li~~cl~~dp~~Rps~~~v~~  176 (224)
                       ........+.+++.+|++.||++|||+.+++.
T Consensus       265 ~~~~~~~~~~~~li~~~l~~dP~~R~t~~~~l~  297 (343)
T cd07880         265 SLLPNANPLAVNVLEKMLVLDAESRITAAEALA  297 (343)
T ss_pred             HhccCCChHHHHHHHHHcCCChhhCCCHHHHhc
Confidence             00001124678999999999999999999984


No 370
>cd05613 STKc_MSK1_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase 1. Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, MSK1, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, which trigger phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydroph
Probab=99.90  E-value=7.7e-24  Score=169.67  Aligned_cols=162  Identities=23%  Similarity=0.298  Sum_probs=116.3

Q ss_pred             CCCCChHHHHHHHHHHHHHHhhhhcCCCCceEecCCCCCceEECCCCCceEeeecceeecCCCCCCCcccccccccccCC
Q 041793            4 CKILDWPKRFHIICGTARGVMYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDEIEGNTNRVIGTYGYMA   83 (224)
Q Consensus         4 ~~~l~~~~~~~i~~qi~~~l~~Lh~~~~~~i~H~dl~~~nil~~~~~~~kl~df~~~~~~~~~~~~~~~~~~~~~~~y~a   83 (224)
                      .+.+++..+..++.||+.||.|||+.|   ++|+||+|+||+++.++.++|+|||++......... ......++..|++
T Consensus        99 ~~~l~~~~~~~~~~qi~~al~~lH~~~---i~H~dl~p~nil~~~~~~~kl~dfg~~~~~~~~~~~-~~~~~~~~~~y~a  174 (290)
T cd05613          99 RERFKEQEVQIYSGEIVLALEHLHKLG---IIYRDIKLENILLDSNGHVVLTDFGLSKEFHEDEVE-RAYSFCGTIEYMA  174 (290)
T ss_pred             cCCCCHHHHHHHHHHHHHHHHHHHhCC---eeccCCCHHHeEECCCCCEEEeeCccceeccccccc-ccccccCCcccCC
Confidence            456889999999999999999999999   999999999999999999999999998765432211 1122456788999


Q ss_pred             cccccCC--CcccccceEehhHHHHHHHhcccCCCCcCCCcc-cccccccCCCccccCccccCCcCHHHHHHHHHHHHHh
Q 041793           84 PEYASDG--KFSVKSDVFSFGILLLEIISGKKNRGFYHSDNK-LNLIGHVSMPSQLIDPCIQGSFNLVEVIRCIHIGLLC  160 (224)
Q Consensus        84 PE~~~~~--~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~c  160 (224)
                      ||.+.+.  .++.++|+||||++++++++|..||........ ............    ..+...    ...+.+++.+|
T Consensus       175 PE~~~~~~~~~~~~~Dv~slG~~l~~ll~g~~p~~~~~~~~~~~~~~~~~~~~~~----~~~~~~----~~~~~~ll~~~  246 (290)
T cd05613         175 PDIVRGGDGGHDKAVDWWSMGVLMYELLTGASPFTVDGEKNSQAEISRRILKSEP----PYPQEM----SALAKDIIQRL  246 (290)
T ss_pred             hhhccCCCCCCCccccHHHHHHHHHHHhcCCCCCCcCCccccHHHHHHHhhccCC----CCCccC----CHHHHHHHHHH
Confidence            9998653  467899999999999999999999853221111 111111100000    011111    23466888999


Q ss_pred             ccCCCCCCC-----ChHHHHHH
Q 041793          161 VQQHPKDRP-----SMPSVILM  177 (224)
Q Consensus       161 l~~dp~~Rp-----s~~~v~~~  177 (224)
                      |+.||++||     ++++++..
T Consensus       247 l~~~p~~R~~~~~~~~~~l~~~  268 (290)
T cd05613         247 LMKDPKKRLGCGPSDADEIKKH  268 (290)
T ss_pred             hcCCHHHhcCCCCCCHHHHHcC
Confidence            999999997     66666553


No 371
>smart00220 S_TKc Serine/Threonine protein kinases, catalytic domain. Phosphotransferases. Serine or threonine-specific kinase subfamily.
Probab=99.90  E-value=7e-24  Score=164.50  Aligned_cols=157  Identities=28%  Similarity=0.383  Sum_probs=119.2

Q ss_pred             CChHHHHHHHHHHHHHHhhhhcCCCCceEecCCCCCceEECCCCCceEeeecceeecCCCCCCCcccccccccccCCccc
Q 041793            7 LDWPKRFHIICGTARGVMYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDEIEGNTNRVIGTYGYMAPEY   86 (224)
Q Consensus         7 l~~~~~~~i~~qi~~~l~~Lh~~~~~~i~H~dl~~~nil~~~~~~~kl~df~~~~~~~~~~~~~~~~~~~~~~~y~aPE~   86 (224)
                      +++.+++.++.+++.++.+||+.+   ++|+||+|.||+++.++.++++|||.+.......   ......++..|++||.
T Consensus        84 ~~~~~~~~~~~~l~~~l~~lh~~~---i~h~~i~~~ni~~~~~~~~~l~d~~~~~~~~~~~---~~~~~~~~~~~~~pE~  157 (244)
T smart00220       84 LSEDEARFYARQILSALEYLHSNG---IIHRDLKPENILLDEDGHVKLADFGLARQLDPGG---LLTTFVGTPEYMAPEV  157 (244)
T ss_pred             CCHHHHHHHHHHHHHHHHHHHHcC---eecCCcCHHHeEECCCCcEEEccccceeeecccc---ccccccCCcCCCCHHH
Confidence            789999999999999999999999   9999999999999999999999999998765432   1222456778999999


Q ss_pred             ccCCCcccccceEehhHHHHHHHhcccCCCCcCCCcccccccccCCCccccCccccCCcCHHHHHHHHHHHHHhccCCCC
Q 041793           87 ASDGKFSVKSDVFSFGILLLEIISGKKNRGFYHSDNKLNLIGHVSMPSQLIDPCIQGSFNLVEVIRCIHIGLLCVQQHPK  166 (224)
Q Consensus        87 ~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dp~  166 (224)
                      +.+..++.++|+|+||++++++++|..||.....  ..................  ..   .....+.+++.+||..+|+
T Consensus       158 ~~~~~~~~~~Di~slG~~l~~l~~~~~p~~~~~~--~~~~~~~~~~~~~~~~~~--~~---~~~~~~~~~i~~~l~~~p~  230 (244)
T smart00220      158 LLGKGYGKAVDVWSLGVILYELLTGKPPFPGDDQ--LLELFKKIGKPKPPFPPP--EW---KISPEAKDLIRKLLVKDPE  230 (244)
T ss_pred             HccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCc--HHHHHHHHhccCCCCccc--cc---cCCHHHHHHHHHHccCCch
Confidence            9888888999999999999999999999754211  111111111111100000  00   0123577899999999999


Q ss_pred             CCCChHHHHH
Q 041793          167 DRPSMPSVIL  176 (224)
Q Consensus       167 ~Rps~~~v~~  176 (224)
                      +||++.++++
T Consensus       231 ~Rp~~~~~~~  240 (244)
T smart00220      231 KRLTAEEALQ  240 (244)
T ss_pred             hccCHHHHhh
Confidence            9999999976


No 372
>KOG0614 consensus cGMP-dependent protein kinase [Signal transduction mechanisms]
Probab=99.90  E-value=1.4e-24  Score=177.69  Aligned_cols=159  Identities=24%  Similarity=0.290  Sum_probs=126.7

Q ss_pred             CCCCCChHHHHHHHHHHHHHHhhhhcCCCCceEecCCCCCceEECCCCCceEeeecceeecCCCCCCCcccccccccccC
Q 041793            3 RCKILDWPKRFHIICGTARGVMYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDEIEGNTNRVIGTYGYM   82 (224)
Q Consensus         3 ~~~~l~~~~~~~i~~qi~~~l~~Lh~~~~~~i~H~dl~~~nil~~~~~~~kl~df~~~~~~~~~~~~~~~~~~~~~~~y~   82 (224)
                      .++.|...+...++.-+++|++|||++|   |+.|||||+|++++.+|-+||.|||+|.....+.   ..-++.||+.|.
T Consensus       513 dRg~Fdd~tarF~~acv~EAfeYLH~k~---iIYRDLKPENllLd~~Gy~KLVDFGFAKki~~g~---KTwTFcGTpEYV  586 (732)
T KOG0614|consen  513 DRGSFDDYTARFYVACVLEAFEYLHRKG---IIYRDLKPENLLLDNRGYLKLVDFGFAKKIGSGR---KTWTFCGTPEYV  586 (732)
T ss_pred             hcCCcccchhhhhHHHHHHHHHHHHhcC---ceeccCChhheeeccCCceEEeehhhHHHhccCC---ceeeecCCcccc
Confidence            4677888888889999999999999999   9999999999999999999999999999875432   234578999999


Q ss_pred             CcccccCCCcccccceEehhHHHHHHHhcccCCCCcCCCcccccccccCCCccccCccccCCcCHHHHHHHHHHHHHhcc
Q 041793           83 APEYASDGKFSVKSDVFSFGILLLEIISGKKNRGFYHSDNKLNLIGHVSMPSQLIDPCIQGSFNLVEVIRCIHIGLLCVQ  162 (224)
Q Consensus        83 aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~  162 (224)
                      |||++.+.+.+.++|.||||+++|||++|.+||...++...-+++-.....-.++..         -.....+||++.+.
T Consensus       587 APEIILnKGHD~avDyWaLGIli~ELL~G~pPFs~~dpmktYn~ILkGid~i~~Pr~---------I~k~a~~Lik~LCr  657 (732)
T KOG0614|consen  587 APEIILNKGHDRAVDYWALGILIYELLTGSPPFSGVDPMKTYNLILKGIDKIEFPRR---------ITKTATDLIKKLCR  657 (732)
T ss_pred             cchhhhccCcchhhHHHHHHHHHHHHHcCCCCCCCCchHHHHHHHHhhhhhhhcccc---------cchhHHHHHHHHHh
Confidence            999999999999999999999999999999999887766544443322211111110         01345678889999


Q ss_pred             CCCCCCCC-----hHHHHH
Q 041793          163 QHPKDRPS-----MPSVIL  176 (224)
Q Consensus       163 ~dp~~Rps-----~~~v~~  176 (224)
                      .+|.+|..     +.+|.+
T Consensus       658 ~~P~ERLG~~~~gI~DIkk  676 (732)
T KOG0614|consen  658 DNPTERLGYQKGGINDIKK  676 (732)
T ss_pred             cCcHhhhccccCChHHHHh
Confidence            99999975     556655


No 373
>KOG2052 consensus Activin A type IB receptor, serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.90  E-value=1.4e-23  Score=169.24  Aligned_cols=178  Identities=22%  Similarity=0.261  Sum_probs=132.2

Q ss_pred             CCCChHHHHHHHHHHHHHHhhhhc-----CCCCceEecCCCCCceEECCCCCceEeeecceeecCCCCC--CCccccccc
Q 041793            5 KILDWPKRFHIICGTARGVMYLHQ-----DSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDEI--EGNTNRVIG   77 (224)
Q Consensus         5 ~~l~~~~~~~i~~qi~~~l~~Lh~-----~~~~~i~H~dl~~~nil~~~~~~~kl~df~~~~~~~~~~~--~~~~~~~~~   77 (224)
                      ..++.+..++++..++.||++||.     +|+|.|.|||||+.||++.+++.+.++|+|+|-.+...+.  .......+|
T Consensus       303 ~tv~~~~ml~LalS~AsGLaHLH~eI~GTqgKPaIAHRDlKSKNILVKkn~~C~IADLGLAv~h~~~t~~idi~~N~rVG  382 (513)
T KOG2052|consen  303 NTVTTEGMLKLALSIASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHDSDTDTIDIPPNPRVG  382 (513)
T ss_pred             ccCCHHHHHHHHHHHhhhHHHHHHHHhcCCCCchhhccccccccEEEccCCcEEEeeceeeEEecccCCcccCCCCCccc
Confidence            568889999999999999999995     4788999999999999999999999999999998865432  223445689


Q ss_pred             ccccCCcccccCCC----c-c-cccceEehhHHHHHHHhc----------ccCCCCcCCCc-ccccccccCCCccccCcc
Q 041793           78 TYGYMAPEYASDGK----F-S-VKSDVFSFGILLLEIISG----------KKNRGFYHSDN-KLNLIGHVSMPSQLIDPC  140 (224)
Q Consensus        78 ~~~y~aPE~~~~~~----~-~-~~~Di~slG~il~~l~~g----------~~p~~~~~~~~-~~~~~~~~~~~~~~~~~~  140 (224)
                      |-+|+|||++...-    + + ..+||||||+++||+...          +.||....+.+ ..+.+..+--..+..+..
T Consensus       383 TKRYMAPEvLdetin~~~Fesyk~ADIYafgLVlWEiarRc~~ggi~eey~~Pyyd~Vp~DPs~eeMrkVVCv~~~RP~i  462 (513)
T KOG2052|consen  383 TKRYMAPEVLDETINMKHFESYKRADIYAFGLVLWEIARRCESGGIVEEYQLPYYDVVPSDPSFEEMRKVVCVQKLRPNI  462 (513)
T ss_pred             eeeccChHHhhhhcChhhhhhhhHHHHHHHHHHHHHHHHHhhcCCEehhhcCCcccCCCCCCCHHHHhcceeecccCCCC
Confidence            99999999985322    2 2 558999999999999742          35664433222 222222222111111122


Q ss_pred             ccCCcCHHHHHHHHHHHHHhccCCCCCCCChHHHHHHhccCC
Q 041793          141 IQGSFNLVEVIRCIHIGLLCVQQHPKDRPSMPSVILMLGSEI  182 (224)
Q Consensus       141 ~~~~~~~~~~~~~~~li~~cl~~dp~~Rps~~~v~~~L~~~~  182 (224)
                      .....+.+.+..+.+||+.||..+|..|-|+-.|.+.|.+..
T Consensus       463 pnrW~s~~~l~~m~klMkeCW~~Np~aRltALriKKtl~~l~  504 (513)
T KOG2052|consen  463 PNRWKSDPALRVMAKLMKECWYANPAARLTALRIKKTLAKLS  504 (513)
T ss_pred             CcccccCHHHHHHHHHHHHhhcCCchhhhHHHHHHHHHHHHh
Confidence            223445666788899999999999999999999999997664


No 374
>KOG1024 consensus Receptor-like protein tyrosine kinase RYK/derailed [Signal transduction mechanisms]
Probab=99.90  E-value=4.2e-24  Score=170.07  Aligned_cols=162  Identities=22%  Similarity=0.300  Sum_probs=124.0

Q ss_pred             CCCChHHHHHHHHHHHHHHhhhhcCCCCceEecCCCCCceEECCCCCceEeeecceeecCCCCCCCcccccccccccCCc
Q 041793            5 KILDWPKRFHIICGTARGVMYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDEIEGNTNRVIGTYGYMAP   84 (224)
Q Consensus         5 ~~l~~~~~~~i~~qi~~~l~~Lh~~~~~~i~H~dl~~~nil~~~~~~~kl~df~~~~~~~~~~~~~~~~~~~~~~~y~aP   84 (224)
                      +.++..+...++.|++.|++|||+.|   ++|.||...||+|+..-.+||+|=.+++-+-..+...-......+..|+++
T Consensus       391 qtvtt~qlV~masQla~am~hlh~~~---ViHkDiAaRNCvIdd~LqVkltDsaLSRDLFP~DYhcLGDnEnRPvkWMsl  467 (563)
T KOG1024|consen  391 QTVTTIQLVLMASQLAMAMEHLHNHG---VIHKDIAARNCVIDDQLQVKLTDSALSRDLFPGDYHCLGDNENRPVKWMSL  467 (563)
T ss_pred             cchhHHHHHHHHHHHHHHHHHHHhcC---cccchhhhhcceehhheeEEeccchhccccCcccccccCCCCCCcccccCH
Confidence            45667788999999999999999999   999999999999999999999998888755433322222223457789999


Q ss_pred             ccccCCCcccccceEehhHHHHHHHh-cccCCCCcCCCcccccccccCCCccccCccccCCcCHHHHHHHHHHHHHhccC
Q 041793           85 EYASDGKFSVKSDVFSFGILLLEIIS-GKKNRGFYHSDNKLNLIGHVSMPSQLIDPCIQGSFNLVEVIRCIHIGLLCVQQ  163 (224)
Q Consensus        85 E~~~~~~~~~~~Di~slG~il~~l~~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~  163 (224)
                      |.+.+..|+.++|+||||+++|||++ |+.|+...++.+....+.......+   +    ...+   ..++.+|..||..
T Consensus       468 Eal~n~~yssasDvWsfGVllWELmtlg~~PyaeIDPfEm~~ylkdGyRlaQ---P----~NCP---DeLf~vMacCWal  537 (563)
T KOG1024|consen  468 EALQNSHYSSASDVWSFGVLLWELMTLGKLPYAEIDPFEMEHYLKDGYRLAQ---P----FNCP---DELFTVMACCWAL  537 (563)
T ss_pred             HHHhhhhhcchhhhHHHHHHHHHHHhcCCCCccccCHHHHHHHHhccceecC---C----CCCc---HHHHHHHHHHHhc
Confidence            99999999999999999999999986 8888654443333333322221111   1    1112   2477888899999


Q ss_pred             CCCCCCChHHHHHHhc
Q 041793          164 HPKDRPSMPSVILMLG  179 (224)
Q Consensus       164 dp~~Rps~~~v~~~L~  179 (224)
                      +|++||++++++..|.
T Consensus       538 lpeeRPsf~Qlv~cLs  553 (563)
T KOG1024|consen  538 LPEERPSFSQLVICLS  553 (563)
T ss_pred             CcccCCCHHHHHHHHH
Confidence            9999999999999885


No 375
>KOG1094 consensus Discoidin domain receptor DDR1 [Signal transduction mechanisms]
Probab=99.90  E-value=3.9e-24  Score=177.44  Aligned_cols=167  Identities=24%  Similarity=0.358  Sum_probs=126.9

Q ss_pred             ChHHHHHHHHHHHHHHhhhhcCCCCceEecCCCCCceEECCCCCceEeeecceeecCCCCCCCcccccccccccCCcccc
Q 041793            8 DWPKRFHIICGTARGVMYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDEIEGNTNRVIGTYGYMAPEYA   87 (224)
Q Consensus         8 ~~~~~~~i~~qi~~~l~~Lh~~~~~~i~H~dl~~~nil~~~~~~~kl~df~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~   87 (224)
                      .-+.-++|+.||+.|++||.+.+   ++|||+.+.|||++.++++|++|||.++-+-.+.......+.+-+++|+|+|.+
T Consensus       635 ~t~~~vsi~tqiasgmaYLes~n---fVHrd~a~rNcLv~~e~~iKiadfgmsR~lysg~yy~vqgr~vlpiRwmawEsi  711 (807)
T KOG1094|consen  635 ETAPGVSICTQIASGMAYLESLN---FVHRDLATRNCLVDGEFTIKIADFGMSRNLYSGDYYRVQGRAVLPIRWMAWESI  711 (807)
T ss_pred             ccchhHHHHHHHHHHHHHHHhhc---hhhccccccceeecCcccEEecCcccccccccCCceeeecceeeeeeehhHHHH
Confidence            44566789999999999999999   999999999999999999999999999865444444445556668899999999


Q ss_pred             cCCCcccccceEehhHHHHHHH--hcccCCCCcCCCcccccccccC-CCccccCccccCCcCHHHHHHHHHHHHHhccCC
Q 041793           88 SDGKFSVKSDVFSFGILLLEII--SGKKNRGFYHSDNKLNLIGHVS-MPSQLIDPCIQGSFNLVEVIRCIHIGLLCVQQH  164 (224)
Q Consensus        88 ~~~~~~~~~Di~slG~il~~l~--~g~~p~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~d  164 (224)
                      ..++++.++|+|+||+.+||++  +...||.....++..+...... .+..-+-...+...+    ..+.++|.+||..|
T Consensus       712 llgkFttaSDvWafgvTlwE~~~~C~e~Py~~lt~e~vven~~~~~~~~~~~~~l~~P~~cp----~~lyelml~Cw~~e  787 (807)
T KOG1094|consen  712 LLGKFTTASDVWAFGVTLWEVFMLCREQPYSQLTDEQVVENAGEFFRDQGRQVVLSRPPACP----QGLYELMLRCWRRE  787 (807)
T ss_pred             HhccccchhhhhhhHHHHHHHHHHHhhCchhhhhHHHHHHhhhhhcCCCCcceeccCCCcCc----HHHHHHHHHHhchh
Confidence            9999999999999999999986  5677876655554443322211 111100001111111    34668999999999


Q ss_pred             CCCCCChHHHHHHhccC
Q 041793          165 PKDRPSMPSVILMLGSE  181 (224)
Q Consensus       165 p~~Rps~~~v~~~L~~~  181 (224)
                      -++||+++++...|+..
T Consensus       788 s~~RPsFe~lh~~lq~~  804 (807)
T KOG1094|consen  788 SEQRPSFEQLHLFLQED  804 (807)
T ss_pred             hhcCCCHHHHHHHHHHh
Confidence            99999999999988654


No 376
>KOG3653 consensus Transforming growth factor beta/activin receptor subfamily of serine/threonine kinases [Signal transduction mechanisms]
Probab=99.90  E-value=2.1e-23  Score=169.24  Aligned_cols=177  Identities=25%  Similarity=0.342  Sum_probs=127.0

Q ss_pred             CCCCChHHHHHHHHHHHHHHhhhhcC------CCCceEecCCCCCceEECCCCCceEeeecceeecCCCCCCCccccccc
Q 041793            4 CKILDWPKRFHIICGTARGVMYLHQD------SRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDEIEGNTNRVIG   77 (224)
Q Consensus         4 ~~~l~~~~~~~i~~qi~~~l~~Lh~~------~~~~i~H~dl~~~nil~~~~~~~kl~df~~~~~~~~~~~~~~~~~~~~   77 (224)
                      ...++|....+|+..++.||+|||+.      -|++|+|||||++|||+..++.+.|+|||++..+............+|
T Consensus       301 ~ntisw~~~cria~SmarGLa~LHee~p~~d~~Kp~IaHRDlkSkNVLvK~DlTccIaDFGLAl~~~p~~~~~d~~~qVG  380 (534)
T KOG3653|consen  301 ANTISWNSLCRIAESMARGLAHLHEELPRGDHHKPPIAHRDLKSKNVLVKNDLTCCIADFGLALRLEPGKPQGDTHGQVG  380 (534)
T ss_pred             hccccHHHHHHHHHHHHHHHHHhcccCCcCCCCCCccccccccccceEEccCCcEEeeccceeEEecCCCCCcchhhhhh
Confidence            34679999999999999999999976      256899999999999999999999999999999876544444444789


Q ss_pred             ccccCCcccccCCC-cc-----cccceEehhHHHHHHHhcccCCCCcCCCcc--------------ccccccc---CCCc
Q 041793           78 TYGYMAPEYASDGK-FS-----VKSDVFSFGILLLEIISGKKNRGFYHSDNK--------------LNLIGHV---SMPS  134 (224)
Q Consensus        78 ~~~y~aPE~~~~~~-~~-----~~~Di~slG~il~~l~~g~~p~~~~~~~~~--------------~~~~~~~---~~~~  134 (224)
                      |.+|+|||++.+.. +.     ...||||+|+++||++++...+......+.              .++...+   ..+.
T Consensus       381 T~RYMAPEvLEgainl~d~~Afkr~DvYamgLVLWEi~SRC~~~~~~~vp~Yqlpfe~evG~hPt~e~mq~~VV~kK~RP  460 (534)
T KOG3653|consen  381 TRRYMAPEVLEGAINLQDRDAFKRIDVYAMGLVLWEIASRCTDADPGPVPEYQLPFEAEVGNHPTLEEMQELVVRKKQRP  460 (534)
T ss_pred             hhhhcCHHHHhhhcccccHHHHHHHHHHHHHHHHHHHHhhcccccCCCCCcccCchhHHhcCCCCHHHHHHHHHhhccCC
Confidence            99999999997643 11     458999999999999987544321000000              0000000   0111


Q ss_pred             cccCccccCCcCHHHHHHHHHHHHHhccCCCCCCCChHHHHHHhccCCCC
Q 041793          135 QLIDPCIQGSFNLVEVIRCIHIGLLCVQQHPKDRPSMPSVILMLGSEIVL  184 (224)
Q Consensus       135 ~~~~~~~~~~~~~~~~~~~~~li~~cl~~dp~~Rps~~~v~~~L~~~~~~  184 (224)
                      .++ ..+..   .....-+.+.+..||..|++.|.|+.=|-+++.....+
T Consensus       461 ~~p-~~W~~---h~~~~~l~et~EeCWDhDaeARLTA~Cv~eR~~~l~~~  506 (534)
T KOG3653|consen  461 KIP-DAWRK---HAGMAVLCETIEECWDHDAEARLTAGCVEERMAELMML  506 (534)
T ss_pred             CCh-hhhhc---CccHHHHHHHHHHHcCCchhhhhhhHHHHHHHHHHhcc
Confidence            111 11111   13345567888999999999999999998888776444


No 377
>KOG0199 consensus ACK and related non-receptor tyrosine kinases [Signal transduction mechanisms]
Probab=99.89  E-value=1.2e-23  Score=177.69  Aligned_cols=161  Identities=28%  Similarity=0.373  Sum_probs=122.9

Q ss_pred             CCCCChHHHHHHHHHHHHHHhhhhcCCCCceEecCCCCCceEECCCCCceEeeecceeecCCCCCCC-cccccccccccC
Q 041793            4 CKILDWPKRFHIICGTARGVMYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDEIEG-NTNRVIGTYGYM   82 (224)
Q Consensus         4 ~~~l~~~~~~~i~~qi~~~l~~Lh~~~~~~i~H~dl~~~nil~~~~~~~kl~df~~~~~~~~~~~~~-~~~~~~~~~~y~   82 (224)
                      +..|-....-.++.||+.|+.||..++   ++||||...|+++...-.+|++|||+.+.+......- ......-.+.|+
T Consensus       206 ~~~llv~~Lcdya~QiA~aM~YLeskr---lvHRDLAARNlllasprtVKI~DFGLmRaLg~ned~Yvm~p~rkvPfAWC  282 (1039)
T KOG0199|consen  206 KAILLVSRLCDYAMQIAKAMQYLESKR---LVHRDLAARNLLLASPRTVKICDFGLMRALGENEDMYVMAPQRKVPFAWC  282 (1039)
T ss_pred             ccceeHHHHHHHHHHHHHHHHHHhhhh---hhhhhhhhhhheecccceeeeecccceeccCCCCcceEecCCCcCccccc
Confidence            345666677889999999999999999   9999999999999999999999999999875432111 011112256799


Q ss_pred             CcccccCCCcccccceEehhHHHHHHHh-cccCCCCcCCCcccccccccCCCccccCccccCCcCHHHHHHHHHHHHHhc
Q 041793           83 APEYASDGKFSVKSDVFSFGILLLEIIS-GKKNRGFYHSDNKLNLIGHVSMPSQLIDPCIQGSFNLVEVIRCIHIGLLCV  161 (224)
Q Consensus        83 aPE~~~~~~~~~~~Di~slG~il~~l~~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl  161 (224)
                      |||.++...++.++|+|+||+.+|||++ |+.||.+.....+...+.   ....+..+.    +..   .++.+++++||
T Consensus       283 aPEsLrh~kFShaSDvWmyGVTiWEMFtyGEePW~G~~g~qIL~~iD---~~erLpRPk----~cs---edIY~imk~cW  352 (1039)
T KOG0199|consen  283 APESLRHRKFSHASDVWMYGVTIWEMFTYGEEPWVGCRGIQILKNID---AGERLPRPK----YCS---EDIYQIMKNCW  352 (1039)
T ss_pred             CHhHhccccccccchhhhhhhhHHhhhccCCCCCCCCCHHHHHHhcc---ccccCCCCC----CCh---HHHHHHHHHhc
Confidence            9999999999999999999999999997 667876655554444333   223332221    222   35778999999


Q ss_pred             cCCCCCCCChHHHHHH
Q 041793          162 QQHPKDRPSMPSVILM  177 (224)
Q Consensus       162 ~~dp~~Rps~~~v~~~  177 (224)
                      ..+|++||+|..|.+.
T Consensus       353 ah~paDRptFsair~~  368 (1039)
T KOG0199|consen  353 AHNPADRPTFSAIRED  368 (1039)
T ss_pred             cCCccccccHHHHHHh
Confidence            9999999999999744


No 378
>KOG0664 consensus Nemo-like MAPK-related serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.89  E-value=3.4e-24  Score=163.77  Aligned_cols=170  Identities=23%  Similarity=0.319  Sum_probs=122.8

Q ss_pred             CCCChHHHHHHHHHHHHHHhhhhcCCCCceEecCCCCCceEECCCCCceEeeecceeecCCCCCCCcccccccccccCCc
Q 041793            5 KILDWPKRFHIICGTARGVMYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDEIEGNTNRVIGTYGYMAP   84 (224)
Q Consensus         5 ~~l~~~~~~~i~~qi~~~l~~Lh~~~~~~i~H~dl~~~nil~~~~~~~kl~df~~~~~~~~~~~~~~~~~~~~~~~y~aP   84 (224)
                      ..|+-..+.-+++||+.||+|||+.+   |+||||||-|.+++.|..+|++|||+++......... .+..+-+..|+||
T Consensus       151 Q~Ls~DHvKVFlYQILRGLKYLHsA~---ILHRDIKPGNLLVNSNCvLKICDFGLARvee~d~~~h-MTqEVVTQYYRAP  226 (449)
T KOG0664|consen  151 QALTPDHVKVFVYQILRGLKYLHTAN---ILHRDIKPGNLLVNSNCILKICDFGLARTWDQRDRLN-MTHEVVTQYYRAP  226 (449)
T ss_pred             CCCCcchhhhhHHHHHhhhHHHhhcc---hhhccCCCccEEeccCceEEecccccccccchhhhhh-hHHHHHHHHhccH
Confidence            45667778889999999999999999   9999999999999999999999999998765443322 2333457789999


Q ss_pred             ccccCC-CcccccceEehhHHHHHHHhcccCCCCcCCCcccccccccC-------------------CCccccCccccCC
Q 041793           85 EYASDG-KFSVKSDVFSFGILLLEIISGKKNRGFYHSDNKLNLIGHVS-------------------MPSQLIDPCIQGS  144 (224)
Q Consensus        85 E~~~~~-~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~-------------------~~~~~~~~~~~~~  144 (224)
                      |++.|. .|+.+.||||+||++.|++..+..|+...+.+..+++....                   .+.....+...-.
T Consensus       227 EiLMGaRhYs~AvDiWSVGCIFaELLgRrILFQAq~PiqQL~lItdLLGTPs~EaMr~ACEGAk~H~LR~~~k~Ps~~vL  306 (449)
T KOG0664|consen  227 ELLMGARRYTGAVDIWSVGCIFAELLQRKILFQAAGPIEQLQMIIDLLGTPSQEAMKYACEGAKNHVLRAGLRAPDTQRL  306 (449)
T ss_pred             HHhhcchhhcCccceehhhHHHHHHHhhhhhhhccChHHHHHHHHHHhCCCcHHHHHHHhhhhHHHhhccCCCCCCccce
Confidence            999875 48999999999999999998888876655444443332111                   0011111111111


Q ss_pred             cCH----HHHHHHHHHHHHhccCCCCCCCChHHHHHHh
Q 041793          145 FNL----VEVIRCIHIGLLCVQQHPKDRPSMPSVILML  178 (224)
Q Consensus       145 ~~~----~~~~~~~~li~~cl~~dp~~Rps~~~v~~~L  178 (224)
                      +.+    ......+.+...++..||++|.+.++.+..+
T Consensus       307 YtlsS~~~~~heav~~~~~~l~~d~dkris~~~A~~~~  344 (449)
T KOG0664|consen  307 YKIASPDDKNHEAVDLLQKLLHFDPDKRISVEEALQHR  344 (449)
T ss_pred             eeecCCcccchHHHHHHHHHhCCCCcccccHhhhcccc
Confidence            110    0112345677889999999999999998765


No 379
>KOG0586 consensus Serine/threonine protein kinase [General function prediction only]
Probab=99.89  E-value=1.4e-23  Score=174.91  Aligned_cols=157  Identities=24%  Similarity=0.312  Sum_probs=123.9

Q ss_pred             CCCCChHHHHHHHHHHHHHHhhhhcCCCCceEecCCCCCceEECCCCCceEeeecceeecCCCCCCCcccccccccccCC
Q 041793            4 CKILDWPKRFHIICGTARGVMYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDEIEGNTNRVIGTYGYMA   83 (224)
Q Consensus         4 ~~~l~~~~~~~i~~qi~~~l~~Lh~~~~~~i~H~dl~~~nil~~~~~~~kl~df~~~~~~~~~~~~~~~~~~~~~~~y~a   83 (224)
                      ++.+.+.....++.|++.|++|||+++   |+|||||++|++++.+.++|++|||+..++...   ....+..|++.|.|
T Consensus       149 ~gr~~e~~ar~~F~q~vsaveYcH~k~---ivHrdLk~eNilL~~~mnikIaDfgfS~~~~~~---~~lqt~cgsppyAa  222 (596)
T KOG0586|consen  149 HGRMKEKEARAKFRQIVSAVEYCHSKN---IVHRDLKAENILLDENMNIKIADFGFSTFFDYG---LMLQTFCGSPPYAA  222 (596)
T ss_pred             cccchhhhhhhhhHHHHHHHHHHhhcc---eeccccchhhcccccccceeeeccccceeeccc---ccccccCCCCCccC
Confidence            455667888899999999999999999   999999999999999999999999999987532   23455778999999


Q ss_pred             cccccCCCcc-cccceEehhHHHHHHHhcccCCCCcCCCcccccccccCCCccccCccccCCcCHHHHHHHHHHHHHhcc
Q 041793           84 PEYASDGKFS-VKSDVFSFGILLLEIISGKKNRGFYHSDNKLNLIGHVSMPSQLIDPCIQGSFNLVEVIRCIHIGLLCVQ  162 (224)
Q Consensus        84 PE~~~~~~~~-~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~  162 (224)
                      ||++.+..+. +.+|+|++|+++|.|+.|..||++.....-..   .+......++..+        ...+-+||+++|.
T Consensus       223 PEl~~g~~y~gpe~D~Wslgvvly~LV~GsLPFDG~~lk~Lr~---rvl~gk~rIp~~m--------s~dce~lLrk~lv  291 (596)
T KOG0586|consen  223 PELFNGKKYDGPEVDIWSLGVVLYALVEGSLPFDGQNLKELRP---RVLRGKYRIPFYM--------SCDCEDLLRKFLV  291 (596)
T ss_pred             hHhhcCcccCCcceehhhhhhhheeeeecccccCCcccccccc---hheeeeeccccee--------echhHHHHHHhhc
Confidence            9999998875 88999999999999999999987543222211   1111111111111        1346688899999


Q ss_pred             CCCCCCCChHHHHHH
Q 041793          163 QHPKDRPSMPSVILM  177 (224)
Q Consensus       163 ~dp~~Rps~~~v~~~  177 (224)
                      .+|.+|++++++.+-
T Consensus       292 l~Pskr~~~dqim~~  306 (596)
T KOG0586|consen  292 LNPSKRGPCDQIMKD  306 (596)
T ss_pred             cCccccCCHHHhhhh
Confidence            999999999999763


No 380
>KOG1006 consensus Mitogen-activated protein kinase (MAPK) kinase MKK4 [Signal transduction mechanisms]
Probab=99.89  E-value=1e-24  Score=165.75  Aligned_cols=163  Identities=27%  Similarity=0.391  Sum_probs=120.4

Q ss_pred             CCCCChHHHHHHHHHHHHHHhhhhcCCCCceEecCCCCCceEECCCCCceEeeecceeecCCCCCCCcccccccccccCC
Q 041793            4 CKILDWPKRFHIICGTARGVMYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDEIEGNTNRVIGTYGYMA   83 (224)
Q Consensus         4 ~~~l~~~~~~~i~~qi~~~l~~Lh~~~~~~i~H~dl~~~nil~~~~~~~kl~df~~~~~~~~~~~~~~~~~~~~~~~y~a   83 (224)
                      +..++++-.-+|..-++.||.||-.+-+  |+|||+||+|||++..|.+||+|||++..+.+..   ..+...|...|+|
T Consensus       161 ~~~ipE~Ilg~ItvatV~AL~yLK~~lk--iIHRDvKPSNILldr~G~vKLCDFGIcGqLv~Si---AkT~daGCrpYmA  235 (361)
T KOG1006|consen  161 KSRIPENILGHITVATVDALDYLKEELK--IIHRDVKPSNILLDRHGDVKLCDFGICGQLVDSI---AKTVDAGCRPYMA  235 (361)
T ss_pred             hccCcHhhhhheeeeehhHHHHHHHHhh--hhhccCChhheEEecCCCEeeecccchHhHHHHH---HhhhccCCccccC
Confidence            3456666666777778899999987643  9999999999999999999999999997654321   2233467778999


Q ss_pred             ccccc--CCCcccccceEehhHHHHHHHhcccCCCCcCCCcccccccccCC--CccccCccccCCcCHHHHHHHHHHHHH
Q 041793           84 PEYAS--DGKFSVKSDVFSFGILLLEIISGKKNRGFYHSDNKLNLIGHVSM--PSQLIDPCIQGSFNLVEVIRCIHIGLL  159 (224)
Q Consensus        84 PE~~~--~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~li~~  159 (224)
                      ||.+.  +.+|+.++|+||||+.++|+.+|+.|+..|.+  ..+.+..+..  +..+..    ..........++.+|.-
T Consensus       236 PERi~p~~~gyDiRSDvWSLGITL~EvAtG~fPyr~w~s--vfeql~~Vv~gdpp~l~~----~~~~~~~s~~~~~fint  309 (361)
T KOG1006|consen  236 PERIDPSDKGYDIRSDVWSLGITLYEVATGNFPYRKWDS--VFEQLCQVVIGDPPILLF----DKECVHYSFSMVRFINT  309 (361)
T ss_pred             hhccCCccCCcchhhhhhhhcceEeeeecCCCCcchHHH--HHHHHHHHHcCCCCeecC----cccccccCHHHHHHHHH
Confidence            99885  34588999999999999999999999987765  2222222221  111111    11112234567788899


Q ss_pred             hccCCCCCCCChHHHHHH
Q 041793          160 CVQQHPKDRPSMPSVILM  177 (224)
Q Consensus       160 cl~~dp~~Rps~~~v~~~  177 (224)
                      |+..|-..||++.++.+.
T Consensus       310 Cl~Kd~~~Rpky~~Lk~~  327 (361)
T KOG1006|consen  310 CLIKDRSDRPKYDDLKKF  327 (361)
T ss_pred             HhhcccccCcchhhhhcC
Confidence            999999999999999774


No 381
>KOG0690 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.89  E-value=2.4e-23  Score=162.47  Aligned_cols=159  Identities=24%  Similarity=0.336  Sum_probs=122.0

Q ss_pred             CCCCCCChHHHHHHHHHHHHHHhhhhcCCCCceEecCCCCCceEECCCCCceEeeecceeecCCCCCCCccccccccccc
Q 041793            2 ERCKILDWPKRFHIICGTARGVMYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDEIEGNTNRVIGTYGY   81 (224)
Q Consensus         2 ~~~~~l~~~~~~~i~~qi~~~l~~Lh~~~~~~i~H~dl~~~nil~~~~~~~kl~df~~~~~~~~~~~~~~~~~~~~~~~y   81 (224)
                      ++.+.+++.....+..+|+.||.|||+++   |+.||+|.+|.++|.+|.+|++|||++..--..  .....++-|++.|
T Consensus       260 srer~FsE~RtRFYGaEIvsAL~YLHs~~---ivYRDlKLENLlLDkDGHIKitDFGLCKE~I~~--g~t~kTFCGTPEY  334 (516)
T KOG0690|consen  260 SRERVFSEDRTRFYGAEIVSALGYLHSRN---IVYRDLKLENLLLDKDGHIKITDFGLCKEEIKY--GDTTKTFCGTPEY  334 (516)
T ss_pred             hhhhcccchhhhhhhHHHHHHhhhhhhCC---eeeeechhhhheeccCCceEeeecccchhcccc--cceeccccCChhh
Confidence            35677888888889999999999999999   999999999999999999999999999753211  2233457899999


Q ss_pred             CCcccccCCCcccccceEehhHHHHHHHhcccCCCCcCCCcccccccccCCCccccCccccCCcCHHHHHHHHHHHHHhc
Q 041793           82 MAPEYASDGKFSVKSDVFSFGILLLEIISGKKNRGFYHSDNKLNLIGHVSMPSQLIDPCIQGSFNLVEVIRCIHIGLLCV  161 (224)
Q Consensus        82 ~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl  161 (224)
                      +|||++....|..+.|.|.+|+++|||++|..||...+-....+++   .+..-.++..+    +.    ....|+...|
T Consensus       335 LAPEVleDnDYgraVDWWG~GVVMYEMmCGRLPFyn~dh~kLFeLI---l~ed~kFPr~l----s~----eAktLLsGLL  403 (516)
T KOG0690|consen  335 LAPEVLEDNDYGRAVDWWGVGVVMYEMMCGRLPFYNKDHEKLFELI---LMEDLKFPRTL----SP----EAKTLLSGLL  403 (516)
T ss_pred             cCchhhccccccceeehhhhhHHHHHHHhccCcccccchhHHHHHH---HhhhccCCccC----CH----HHHHHHHHHh
Confidence            9999999999999999999999999999999998654433333322   22221111111    11    2456777999


Q ss_pred             cCCCCCCC-----ChHHHHH
Q 041793          162 QQHPKDRP-----SMPSVIL  176 (224)
Q Consensus       162 ~~dp~~Rp-----s~~~v~~  176 (224)
                      ..||.+|.     .+.||.+
T Consensus       404 ~kdP~kRLGgGpdDakEi~~  423 (516)
T KOG0690|consen  404 KKDPKKRLGGGPDDAKEIMR  423 (516)
T ss_pred             hcChHhhcCCCchhHHHHHh
Confidence            99999994     4556654


No 382
>KOG1027 consensus Serine/threonine protein kinase and endoribonuclease ERN1/IRE1, sensor of the unfolded protein response pathway [Signal transduction mechanisms]
Probab=99.88  E-value=1.6e-23  Score=179.57  Aligned_cols=153  Identities=25%  Similarity=0.401  Sum_probs=113.2

Q ss_pred             HHHHHHHHHHHHHhhhhcCCCCceEecCCCCCceEECC---C--CCceEeeecceeecCCCCCC-CcccccccccccCCc
Q 041793           11 KRFHIICGTARGVMYLHQDSRLRIIHRDLKASNVLLDQ---D--MNPKISDFGLARAFGGDEIE-GNTNRVIGTYGYMAP   84 (224)
Q Consensus        11 ~~~~i~~qi~~~l~~Lh~~~~~~i~H~dl~~~nil~~~---~--~~~kl~df~~~~~~~~~~~~-~~~~~~~~~~~y~aP   84 (224)
                      ..+.++.|++.||++||+.+   |+||||||.||||..   +  ..++|+|||++.++..+... .+.....|+.+|.||
T Consensus       607 ~~~~~l~q~~~GlaHLHsl~---iVHRDLkPQNILI~~~~~~~~~ra~iSDfglsKkl~~~~sS~~r~s~~sGt~GW~AP  683 (903)
T KOG1027|consen  607 DPISVLSQIASGLAHLHSLK---IVHRDLKPQNILISVPSADGTLRAKISDFGLSKKLAGGKSSFSRLSGGSGTSGWQAP  683 (903)
T ss_pred             cHHHHHHHHHHHHHHHHhcc---cccccCCCceEEEEccCCCcceeEEecccccccccCCCcchhhcccCCCCcccccCH
Confidence            45778999999999999999   999999999999976   3  45799999999988654332 223335788999999


Q ss_pred             ccccCCCcccccceEehhHHHHHHHhc-ccCCCCcCCCcccccccccCCCccccCccccCCcCHHHHHHHHHHHHHhccC
Q 041793           85 EYASDGKFSVKSDVFSFGILLLEIISG-KKNRGFYHSDNKLNLIGHVSMPSQLIDPCIQGSFNLVEVIRCIHIGLLCVQQ  163 (224)
Q Consensus        85 E~~~~~~~~~~~Di~slG~il~~l~~g-~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~  163 (224)
                      |.+.....+.++|||||||++|+.++| ..||+.....+ .+++.... .-.    .+....+-    ...+||.+|+..
T Consensus       684 E~L~~~~~~~avDiFslGCvfyYvltgG~HpFGd~~~R~-~NIl~~~~-~L~----~L~~~~d~----eA~dLI~~ml~~  753 (903)
T KOG1027|consen  684 EQLREDRKTQAVDIFSLGCVFYYVLTGGSHPFGDSLERQ-ANILTGNY-TLV----HLEPLPDC----EAKDLISRMLNP  753 (903)
T ss_pred             HHHhccccCcccchhhcCceEEEEecCCccCCCchHHhh-hhhhcCcc-cee----eeccCchH----HHHHHHHHhcCC
Confidence            999988888899999999999999887 78886422221 11111111 000    11111111    456788899999


Q ss_pred             CCCCCCChHHHHH
Q 041793          164 HPKDRPSMPSVIL  176 (224)
Q Consensus       164 dp~~Rps~~~v~~  176 (224)
                      ||..||++.+|+.
T Consensus       754 dP~~RPsa~~VL~  766 (903)
T KOG1027|consen  754 DPQLRPSATDVLN  766 (903)
T ss_pred             CcccCCCHHHHhC
Confidence            9999999999975


No 383
>KOG4236 consensus Serine/threonine protein kinase PKC mu/PKD and related proteins [Signal transduction mechanisms]
Probab=99.88  E-value=1e-23  Score=173.54  Aligned_cols=160  Identities=24%  Similarity=0.306  Sum_probs=122.5

Q ss_pred             CCCCCCChHHHHHHHHHHHHHHhhhhcCCCCceEecCCCCCceEECCC---CCceEeeecceeecCCCCCCCcccccccc
Q 041793            2 ERCKILDWPKRFHIICGTARGVMYLHQDSRLRIIHRDLKASNVLLDQD---MNPKISDFGLARAFGGDEIEGNTNRVIGT   78 (224)
Q Consensus         2 ~~~~~l~~~~~~~i~~qi~~~l~~Lh~~~~~~i~H~dl~~~nil~~~~---~~~kl~df~~~~~~~~~~~~~~~~~~~~~   78 (224)
                      ++++.|++..-..++.||+.||+|||.++   |+|+||||+||++...   ..+||+|||+|+......   .-...+||
T Consensus       656 sEkgRL~er~TkFlvtQIL~ALr~LH~kn---IvHCDLKPENVLLas~~~FPQvKlCDFGfARiIgEks---FRrsVVGT  729 (888)
T KOG4236|consen  656 SEKGRLPERITKFLVTQILVALRYLHFKN---IVHCDLKPENVLLASASPFPQVKLCDFGFARIIGEKS---FRRSVVGT  729 (888)
T ss_pred             hhcccchHHHHHHHHHHHHHHHHHhhhcc---eeeccCCchheeeccCCCCCceeeccccceeecchhh---hhhhhcCC
Confidence            46788999999999999999999999999   9999999999999654   458999999999875432   22346899


Q ss_pred             cccCCcccccCCCcccccceEehhHHHHHHHhcccCCCCcCCCcccccccccCCCccccCccccCCcCHHHHHHHHHHHH
Q 041793           79 YGYMAPEYASDGKFSVKSDVFSFGILLLEIISGKKNRGFYHSDNKLNLIGHVSMPSQLIDPCIQGSFNLVEVIRCIHIGL  158 (224)
Q Consensus        79 ~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~  158 (224)
                      +.|+|||++++.+|+.+.||||+|+|+|.-++|..||..  ++++...+...   ..+.++......    ....++||.
T Consensus       730 PAYLaPEVLrnkGyNrSLDMWSVGVIiYVsLSGTFPFNE--dEdIndQIQNA---aFMyPp~PW~ei----s~~AidlIn  800 (888)
T KOG4236|consen  730 PAYLAPEVLRNKGYNRSLDMWSVGVIIYVSLSGTFPFNE--DEDINDQIQNA---AFMYPPNPWSEI----SPEAIDLIN  800 (888)
T ss_pred             ccccCHHHHhhccccccccceeeeEEEEEEecccccCCC--ccchhHHhhcc---ccccCCCchhhc----CHHHHHHHH
Confidence            999999999999999999999999999999999999743  22222222222   122222211111    234678888


Q ss_pred             HhccCCCCCCCChHHHHH
Q 041793          159 LCVQQHPKDRPSMPSVIL  176 (224)
Q Consensus       159 ~cl~~dp~~Rps~~~v~~  176 (224)
                      ..|+..-.+|.|....+.
T Consensus       801 ~LLqVkm~kRysvdk~ls  818 (888)
T KOG4236|consen  801 NLLQVKMRKRYSVDKSLS  818 (888)
T ss_pred             HHHHHHHHHhcchHhhcc
Confidence            999999999998876653


No 384
>KOG0696 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.88  E-value=7.2e-23  Score=164.29  Aligned_cols=151  Identities=28%  Similarity=0.380  Sum_probs=118.7

Q ss_pred             CCCCCChHHHHHHHHHHHHHHhhhhcCCCCceEecCCCCCceEECCCCCceEeeecceeecCCCCCCCcccccccccccC
Q 041793            3 RCKILDWPKRFHIICGTARGVMYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDEIEGNTNRVIGTYGYM   82 (224)
Q Consensus         3 ~~~~l~~~~~~~i~~qi~~~l~~Lh~~~~~~i~H~dl~~~nil~~~~~~~kl~df~~~~~~~~~~~~~~~~~~~~~~~y~   82 (224)
                      +-+.+.+.....++.+|+.||-|||++|   |+.||||.+||+++..|.+|++|||.+..--...  ....++-||+.|+
T Consensus       443 Q~GkFKEp~AvFYAaEiaigLFFLh~kg---IiYRDLKLDNvmLd~eGHiKi~DFGmcKEni~~~--~TTkTFCGTPdYi  517 (683)
T KOG0696|consen  443 QVGKFKEPVAVFYAAEIAIGLFFLHSKG---IIYRDLKLDNVMLDSEGHIKIADFGMCKENIFDG--VTTKTFCGTPDYI  517 (683)
T ss_pred             HhcccCCchhhhhhHHHHHHhhhhhcCC---eeeeeccccceEeccCCceEeeecccccccccCC--cceeeecCCCccc
Confidence            3467788889999999999999999999   9999999999999999999999999987532221  2234467899999


Q ss_pred             CcccccCCCcccccceEehhHHHHHHHhcccCCCCcCCCcccccccccCCCccccCccccCCcCHHHHHHHHHHHHHhcc
Q 041793           83 APEYASDGKFSVKSDVFSFGILLLEIISGKKNRGFYHSDNKLNLIGHVSMPSQLIDPCIQGSFNLVEVIRCIHIGLLCVQ  162 (224)
Q Consensus        83 aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~  162 (224)
                      |||++...+|..++|.||+|+++|||+.|++||++.+.+.....+..-.         ..-+.++  ....+.+++..|.
T Consensus       518 APEIi~YqPYgksvDWWa~GVLLyEmlaGQpPFdGeDE~elF~aI~ehn---------vsyPKsl--SkEAv~ickg~lt  586 (683)
T KOG0696|consen  518 APEIIAYQPYGKSVDWWAFGVLLYEMLAGQPPFDGEDEDELFQAIMEHN---------VSYPKSL--SKEAVAICKGLLT  586 (683)
T ss_pred             ccceEEecccccchhHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHHcc---------CcCcccc--cHHHHHHHHHHhh
Confidence            9999999999999999999999999999999988766554433222111         1111111  2345677789999


Q ss_pred             CCCCCCC
Q 041793          163 QHPKDRP  169 (224)
Q Consensus       163 ~dp~~Rp  169 (224)
                      .+|.+|.
T Consensus       587 K~P~kRL  593 (683)
T KOG0696|consen  587 KHPGKRL  593 (683)
T ss_pred             cCCcccc
Confidence            9999993


No 385
>KOG0670 consensus U4/U6-associated splicing factor PRP4 [RNA processing and modification]
Probab=99.87  E-value=7.5e-23  Score=167.97  Aligned_cols=166  Identities=19%  Similarity=0.167  Sum_probs=120.9

Q ss_pred             CCCCChHHHHHHHHHHHHHHhhhhcCCCCceEecCCCCCceEECCC-CCceEeeecceeecCCCCCCCcccccccccccC
Q 041793            4 CKILDWPKRFHIICGTARGVMYLHQDSRLRIIHRDLKASNVLLDQD-MNPKISDFGLARAFGGDEIEGNTNRVIGTYGYM   82 (224)
Q Consensus         4 ~~~l~~~~~~~i~~qi~~~l~~Lh~~~~~~i~H~dl~~~nil~~~~-~~~kl~df~~~~~~~~~~~~~~~~~~~~~~~y~   82 (224)
                      +-.|.+..+..++.|+.-||..|-..|   |+|+||||+|||+..+ ..+||||||.|.+......    +-++-+..|.
T Consensus       530 nvGL~ikaVRsYaqQLflALklLK~c~---vlHaDIKPDNiLVNE~k~iLKLCDfGSA~~~~enei----tPYLVSRFYR  602 (752)
T KOG0670|consen  530 NVGLHIKAVRSYAQQLFLALKLLKKCG---VLHADIKPDNILVNESKNILKLCDFGSASFASENEI----TPYLVSRFYR  602 (752)
T ss_pred             ccceeehHHHHHHHHHHHHHHHHHhcC---eeecccCccceEeccCcceeeeccCccccccccccc----cHHHHHHhcc
Confidence            345677888899999999999999999   9999999999999865 4579999999987654322    1133356799


Q ss_pred             CcccccCCCcccccceEehhHHHHHHHhcccCCCCcCCCccccccccc--CCC---------------------------
Q 041793           83 APEYASDGKFSVKSDVFSFGILLLEIISGKKNRGFYHSDNKLNLIGHV--SMP---------------------------  133 (224)
Q Consensus        83 aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~--~~~---------------------------  133 (224)
                      |||++.|.+|+...|+||+||+||||++|+..|.+.....-..+....  .++                           
T Consensus       603 aPEIiLG~~yd~~iD~WSvgctLYElYtGkIlFpG~TNN~MLrl~me~KGk~p~KmlRKgqF~dqHFD~d~nf~~~e~D~  682 (752)
T KOG0670|consen  603 APEIILGLPYDYPIDTWSVGCTLYELYTGKILFPGRTNNQMLRLFMELKGKFPNKMLRKGQFKDQHFDQDLNFLYIEVDK  682 (752)
T ss_pred             CcceeecCcccCCccceeeceeeEEeeccceecCCCCcHHHHHHHHHhcCCCcHHHhhhcchhhhhcccccceEEEeccc
Confidence            999999999999999999999999999999888664433221111000  000                           


Q ss_pred             -----ccccCcccc---------------CCcCHHHHHHHHHHHHHhccCCCCCCCChHHHHH
Q 041793          134 -----SQLIDPCIQ---------------GSFNLVEVIRCIHIGLLCVQQHPKDRPSMPSVIL  176 (224)
Q Consensus       134 -----~~~~~~~~~---------------~~~~~~~~~~~~~li~~cl~~dp~~Rps~~~v~~  176 (224)
                           ...+...+.               ..-....+..+.+|+-.||..||++|.+..++++
T Consensus       683 vT~r~~~~vm~~vkPtkdl~s~l~~~q~~~deq~~~~~~~rdLLdkml~LdP~KRit~nqAL~  745 (752)
T KOG0670|consen  683 VTEREKRTVMVNVKPTKDLGSELIAVQRLPDEQPKIVQQLRDLLDKMLILDPEKRITVNQALK  745 (752)
T ss_pred             cccceeEEEecccCcchhHHHHHhccCCCCchhHHHHHHHHHHHHHHhccChhhcCCHHHHhc
Confidence                 000000001               1112334567789999999999999999999865


No 386
>KOG1151 consensus Tousled-like protein kinase [Signal transduction mechanisms]
Probab=99.87  E-value=1.5e-21  Score=158.01  Aligned_cols=167  Identities=26%  Similarity=0.358  Sum_probs=119.8

Q ss_pred             CCCCCChHHHHHHHHHHHHHHhhhhcCCCCceEecCCCCCceEEC---CCCCceEeeecceeecCCCCCCCc-----ccc
Q 041793            3 RCKILDWPKRFHIICGTARGVMYLHQDSRLRIIHRDLKASNVLLD---QDMNPKISDFGLARAFGGDEIEGN-----TNR   74 (224)
Q Consensus         3 ~~~~l~~~~~~~i~~qi~~~l~~Lh~~~~~~i~H~dl~~~nil~~---~~~~~kl~df~~~~~~~~~~~~~~-----~~~   74 (224)
                      .++.+++.+...|+.||+.||.||.... ++|+|=||||-|||+.   ..|.+|+.|||++..+........     ...
T Consensus       561 QhklmSEKEARSIiMQiVnAL~YLNEik-pPIIHYDLKPgNILLv~GtacGeIKITDFGLSKIMdddSy~~vdGmeLTSQ  639 (775)
T KOG1151|consen  561 QHKLMSEKEARSIIMQIVNALKYLNEIK-PPIIHYDLKPGNILLVNGTACGEIKITDFGLSKIMDDDSYNSVDGMELTSQ  639 (775)
T ss_pred             hhhhhhHHHHHHHHHHHHHHHHHHhccC-CCeeeeccCCccEEEecCcccceeEeeecchhhhccCCccCcccceeeecc
Confidence            4677899999999999999999998875 6699999999999985   457899999999998765332211     123


Q ss_pred             cccccccCCcccccCC----CcccccceEehhHHHHHHHhcccCCCCcCCCcccccccccCCCccccCccccCCcCHHHH
Q 041793           75 VIGTYGYMAPEYASDG----KFSVKSDVFSFGILLLEIISGKKNRGFYHSDNKLNLIGHVSMPSQLIDPCIQGSFNLVEV  150 (224)
Q Consensus        75 ~~~~~~y~aPE~~~~~----~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  150 (224)
                      ..|+++|++||.+.-+    ..+.|.||||+|+|+|.++.|+.||+........-...-+....+ +.....+...    
T Consensus       640 gAGTYWYLPPEcFvVgkePPKIsnKVDVWSvGVIFyQClYGrKPFGhnqsQQdILqeNTIlkAtE-VqFP~KPvVs----  714 (775)
T KOG1151|consen  640 GAGTYWYLPPECFVVGKEPPKISNKVDVWSVGVIFYQCLYGRKPFGHNQSQQDILQENTILKATE-VQFPPKPVVS----  714 (775)
T ss_pred             cCceeeecCcceeecCCCCCccccceeeEeeehhhhhhhccCCCCCCchhHHHHHhhhchhccee-ccCCCCCccC----
Confidence            5789999999988543    467999999999999999999999975443322211111111111 1111111111    


Q ss_pred             HHHHHHHHHhccCCCCCCCChHHHH
Q 041793          151 IRCIHIGLLCVQQHPKDRPSMPSVI  175 (224)
Q Consensus       151 ~~~~~li~~cl~~dp~~Rps~~~v~  175 (224)
                      .....+|++||++.-+.|....++.
T Consensus       715 seAkaFIRRCLaYRKeDR~DV~qLA  739 (775)
T KOG1151|consen  715 SEAKAFIRRCLAYRKEDRIDVQQLA  739 (775)
T ss_pred             HHHHHHHHHHHHhhhhhhhhHHHHc
Confidence            2345688899999999999887763


No 387
>KOG0695 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.86  E-value=2.1e-22  Score=158.06  Aligned_cols=160  Identities=24%  Similarity=0.369  Sum_probs=120.1

Q ss_pred             CCCCCCChHHHHHHHHHHHHHHhhhhcCCCCceEecCCCCCceEECCCCCceEeeecceeecCCCCCCCccccccccccc
Q 041793            2 ERCKILDWPKRFHIICGTARGVMYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDEIEGNTNRVIGTYGY   81 (224)
Q Consensus         2 ~~~~~l~~~~~~~i~~qi~~~l~~Lh~~~~~~i~H~dl~~~nil~~~~~~~kl~df~~~~~~~~~~~~~~~~~~~~~~~y   81 (224)
                      ++.+.|+++....+..+|+-||.|||++|   |+.||||.+|++++..|.+||.|+|.+..--..  .....++-|++.|
T Consensus       343 qrqrklpeeharfys~ei~lal~flh~rg---iiyrdlkldnvlldaeghikltdygmcke~l~~--gd~tstfcgtpny  417 (593)
T KOG0695|consen  343 QRQRKLPEEHARFYSAEICLALNFLHERG---IIYRDLKLDNVLLDAEGHIKLTDYGMCKEGLGP--GDTTSTFCGTPNY  417 (593)
T ss_pred             hhhhcCcHHHhhhhhHHHHHHHHHHhhcC---eeeeeccccceEEccCCceeecccchhhcCCCC--CcccccccCCCcc
Confidence            35678999999999999999999999999   999999999999999999999999998743211  2234457889999


Q ss_pred             CCcccccCCCcccccceEehhHHHHHHHhcccCCCCcCCCcccccccccCCCccccCccccCCcCHHHHHHHHHHHHHhc
Q 041793           82 MAPEYASDGKFSVKSDVFSFGILLLEIISGKKNRGFYHSDNKLNLIGHVSMPSQLIDPCIQGSFNLVEVIRCIHIGLLCV  161 (224)
Q Consensus        82 ~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl  161 (224)
                      .|||++++..|..+.|.|+||++++||+.|..||+....++..+....... +.+++.....+.++  ..+...+++..|
T Consensus       418 iapeilrgeeygfsvdwwalgvlmfemmagrspfdivgm~n~d~ntedylf-qvilekqiriprsl--svkas~vlkgfl  494 (593)
T KOG0695|consen  418 IAPEILRGEEYGFSVDWWALGVLMFEMMAGRSPFDIVGMDNPDMNTEDYLF-QVILEKQIRIPRSL--SVKASHVLKGFL  494 (593)
T ss_pred             cchhhhcccccCceehHHHHHHHHHHHHcCCCCcceecCCCcccchhHHHH-HHHhhhccccccee--ehhhHHHHHHhh
Confidence            999999999999999999999999999999999986554444332221110 00011111111111  123456777899


Q ss_pred             cCCCCCCC
Q 041793          162 QQHPKDRP  169 (224)
Q Consensus       162 ~~dp~~Rp  169 (224)
                      ..||.+|.
T Consensus       495 nkdp~erl  502 (593)
T KOG0695|consen  495 NKDPKERL  502 (593)
T ss_pred             cCCcHHhc
Confidence            99999983


No 388
>KOG0984 consensus Mitogen-activated protein kinase (MAPK) kinase MKK3/MKK6 [Signal transduction mechanisms]
Probab=99.86  E-value=2e-22  Score=148.25  Aligned_cols=112  Identities=29%  Similarity=0.397  Sum_probs=94.9

Q ss_pred             CCCCCChHHHHHHHHHHHHHHhhhhcCCCCceEecCCCCCceEECCCCCceEeeecceeecCCCCCCCcccccccccccC
Q 041793            3 RCKILDWPKRFHIICGTARGVMYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDEIEGNTNRVIGTYGYM   82 (224)
Q Consensus         3 ~~~~l~~~~~~~i~~qi~~~l~~Lh~~~~~~i~H~dl~~~nil~~~~~~~kl~df~~~~~~~~~~~~~~~~~~~~~~~y~   82 (224)
                      +++.+++..+=+|+..|+.||.|||++-  .++|||+||+|||++..|.+|++|||++..+.+..   ..+...|...|+
T Consensus       141 ~g~~ipE~vlGkIa~Svv~al~~L~~kL--~vIHRDvKPsNiLIn~~GqVKiCDFGIsG~L~dSi---Akt~daGCkpYm  215 (282)
T KOG0984|consen  141 KGGTIPEDVLGKIAVSVVHALEFLHSKL--SVIHRDVKPSNILINYDGQVKICDFGISGYLVDSI---AKTMDAGCKPYM  215 (282)
T ss_pred             cCCcCchHHhhHhHHHHHHHHHHHHHHh--hhhhccCCcceEEEccCCcEEEcccccceeehhhh---HHHHhcCCCccC
Confidence            5677888899999999999999999985  49999999999999999999999999998765432   122235667899


Q ss_pred             CcccccC----CCcccccceEehhHHHHHHHhcccCCCCcC
Q 041793           83 APEYASD----GKFSVKSDVFSFGILLLEIISGKKNRGFYH  119 (224)
Q Consensus        83 aPE~~~~----~~~~~~~Di~slG~il~~l~~g~~p~~~~~  119 (224)
                      |||.+..    ..|+.++||||||+.+.||.++..||..|.
T Consensus       216 aPEri~~e~n~~gY~vksDvWSLGItmiElA~lr~PY~~w~  256 (282)
T KOG0984|consen  216 APERINPELNQKGYSVKSDVWSLGITMIEMAILRFPYESWG  256 (282)
T ss_pred             ChhhcCcccCcccceeehhhhhhhhhhhhhhhccccccccC
Confidence            9998853    368899999999999999999999987654


No 389
>KOG0607 consensus MAP kinase-interacting kinase and related serine/threonine protein kinases [Signal transduction mechanisms]
Probab=99.86  E-value=8.6e-22  Score=153.42  Aligned_cols=166  Identities=20%  Similarity=0.224  Sum_probs=118.1

Q ss_pred             CCCCCChHHHHHHHHHHHHHHhhhhcCCCCceEecCCCCCceEECCCC---CceEeeecceeecCCCCC-----CCcccc
Q 041793            3 RCKILDWPKRFHIICGTARGVMYLHQDSRLRIIHRDLKASNVLLDQDM---NPKISDFGLARAFGGDEI-----EGNTNR   74 (224)
Q Consensus         3 ~~~~l~~~~~~~i~~qi~~~l~~Lh~~~~~~i~H~dl~~~nil~~~~~---~~kl~df~~~~~~~~~~~-----~~~~~~   74 (224)
                      +++.+++.+.-++..+|+.||.|||++|   |.|||+||+|||-....   -+|++||.+.........     .....+
T Consensus       169 ~~~~F~E~EAs~vvkdia~aLdFlH~kg---IAHRDlKPENiLC~~pn~vsPvKiCDfDLgSg~k~~~~~spastP~L~t  245 (463)
T KOG0607|consen  169 KRKHFNEREASRVVKDIASALDFLHTKG---IAHRDLKPENILCESPNKVSPVKICDFDLGSGIKLNNDCSPASTPELLT  245 (463)
T ss_pred             HhhhccHHHHHHHHHHHHHHHHHHhhcC---cccccCCccceeecCCCCcCceeeeccccccccccCCCCCCCCCccccC
Confidence            4677899999999999999999999999   99999999999996543   369999988764432111     112234


Q ss_pred             cccccccCCccccc-----CCCcccccceEehhHHHHHHHhcccCCCCcCCCccc-------ccc-----cccC-CCccc
Q 041793           75 VIGTYGYMAPEYAS-----DGKFSVKSDVFSFGILLLEIISGKKNRGFYHSDNKL-------NLI-----GHVS-MPSQL  136 (224)
Q Consensus        75 ~~~~~~y~aPE~~~-----~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~-------~~~-----~~~~-~~~~~  136 (224)
                      ..|+..|+|||+..     ..-|+.++|.||||+|+|-|++|.+||.+.=+.+-.       ...     ..+. -..+.
T Consensus       246 PvGSAEfMAPEVVd~fv~qA~~YDKrCDlwSLGvIlYImLsGYpPFvG~Cg~dCGWdrGe~Cr~CQ~~LFesIQEGkYeF  325 (463)
T KOG0607|consen  246 PVGSAEFMAPEVVDVFVDQATFYDKRCDLWSLGVILYIMLSGYPPFVGHCGADCGWDRGEVCRVCQNKLFESIQEGKYEF  325 (463)
T ss_pred             cccchhhcchhHHhhhccccccccccccHHHHHHHHHHHHhCCCCccCccCCcCCccCCCccHHHHHHHHHHHhccCCcC
Confidence            57888999999763     234789999999999999999999999653332111       110     0010 11122


Q ss_pred             cCccccCCcCHHHHHHHHHHHHHhccCCCCCCCChHHHHH
Q 041793          137 IDPCIQGSFNLVEVIRCIHIGLLCVQQHPKDRPSMPSVIL  176 (224)
Q Consensus       137 ~~~~~~~~~~~~~~~~~~~li~~cl~~dp~~Rps~~~v~~  176 (224)
                      ++..+..     -.....+++...+..|+.+|-++.++++
T Consensus       326 PdkdWah-----IS~eakdlisnLlvrda~~rlsa~~vln  360 (463)
T KOG0607|consen  326 PDKDWAH-----ISSEAKDLISNLLVRDAKQRLSAAQVLN  360 (463)
T ss_pred             ChhhhHH-----hhHHHHHHHHHHHhccHHhhhhhhhccC
Confidence            3322221     1234467888999999999999999887


No 390
>KOG4250 consensus TANK binding protein kinase TBK1 [Signal transduction mechanisms]
Probab=99.86  E-value=1.2e-21  Score=165.90  Aligned_cols=170  Identities=21%  Similarity=0.339  Sum_probs=122.8

Q ss_pred             CCCCCChHHHHHHHHHHHHHHhhhhcCCCCceEecCCCCCceEEC--CCC--CceEeeecceeecCCCCCCCcccccccc
Q 041793            3 RCKILDWPKRFHIICGTARGVMYLHQDSRLRIIHRDLKASNVLLD--QDM--NPKISDFGLARAFGGDEIEGNTNRVIGT   78 (224)
Q Consensus         3 ~~~~l~~~~~~~i~~qi~~~l~~Lh~~~~~~i~H~dl~~~nil~~--~~~--~~kl~df~~~~~~~~~~~~~~~~~~~~~   78 (224)
                      ....|++.+.+.++.+++.||+|||++|   |+||||||.||++-  .+|  ..||+|||.|+...++.   .....+||
T Consensus       113 N~~GLpE~e~l~lL~d~~~al~~LrEn~---IvHRDlKP~NIvl~~Gedgq~IyKLtDfG~Arel~d~s---~~~S~vGT  186 (732)
T KOG4250|consen  113 NAYGLPESEFLDLLSDLVSALRHLRENG---IVHRDLKPGNIVLQIGEDGQSIYKLTDFGAARELDDNS---LFTSLVGT  186 (732)
T ss_pred             cccCCCHHHHHHHHHHHHHHHHHHHHcC---ceeccCCCCcEEEeecCCCceEEeeecccccccCCCCC---eeeeecCc
Confidence            3457899999999999999999999999   99999999999884  334  36999999999876543   35567999


Q ss_pred             cccCCccccc-CCCcccccceEehhHHHHHHHhcccCCCCcCCCc-ccccccccC--CCcc-----------cc--Cccc
Q 041793           79 YGYMAPEYAS-DGKFSVKSDVFSFGILLLEIISGKKNRGFYHSDN-KLNLIGHVS--MPSQ-----------LI--DPCI  141 (224)
Q Consensus        79 ~~y~aPE~~~-~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~-~~~~~~~~~--~~~~-----------~~--~~~~  141 (224)
                      ..|++||+.. ...|+..+|.|||||++|++.||..||..+.... ..+.+.+..  .+..           .+  ...+
T Consensus       187 ~~YLhPel~E~q~~y~~tVDLWS~GvtlY~caTG~lPF~p~~~pk~~~~~~~~~~tkkp~~v~i~~~~~eNgpv~~s~~l  266 (732)
T KOG4250|consen  187 EEYLHPELYERQKKYTATVDLWSFGVTLYECATGELPFIPFGGPKNNKEIMWHIITKKPSGVAIGAQEEENGPVEWSSTL  266 (732)
T ss_pred             hhhcChHHHhhccCcCceeehhhhhhHHHHHhccCCCCCcCCCccccchhhhhhhccCCCceeEeeecccCCceeeeccC
Confidence            9999999998 4788999999999999999999999997655442 111221111  0000           00  0011


Q ss_pred             c--CCcCHHHHHHHHHHHHHhccCCCCCCC--ChHHHHHHh
Q 041793          142 Q--GSFNLVEVIRCIHIGLLCVQQHPKDRP--SMPSVILML  178 (224)
Q Consensus       142 ~--~~~~~~~~~~~~~li~~cl~~dp~~Rp--s~~~v~~~L  178 (224)
                      +  ..-......++-+.+..+|.++|.+|-  .+.+....+
T Consensus       267 P~p~~Ls~~l~~~~~kwLa~~L~~~~~~~~~~~~~~~Fa~~  307 (732)
T KOG4250|consen  267 PQPNHLSRGLATRLTKWLASMLEWNPRKRGHEGFDRFFAEV  307 (732)
T ss_pred             CCcccccHHHHhhhhHHHHHHHhhhHHHhCCCCcchHHHHH
Confidence            1  111223345666788899999999998  554444443


No 391
>KOG1025 consensus Epidermal growth factor receptor EGFR and related tyrosine kinases [Signal transduction mechanisms]
Probab=99.86  E-value=8.6e-22  Score=169.04  Aligned_cols=165  Identities=26%  Similarity=0.381  Sum_probs=128.0

Q ss_pred             CCCCCCChHHHHHHHHHHHHHHhhhhcCCCCceEecCCCCCceEECCCCCceEeeecceeecCCCCCCCccccccccccc
Q 041793            2 ERCKILDWPKRFHIICGTARGVMYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDEIEGNTNRVIGTYGY   81 (224)
Q Consensus         2 ~~~~~l~~~~~~~i~~qi~~~l~~Lh~~~~~~i~H~dl~~~nil~~~~~~~kl~df~~~~~~~~~~~~~~~~~~~~~~~y   81 (224)
                      ..+.++-.+..+.+..||++|+.|||+++   ++||||...|||+.....+|+.|||++........+-......-.+.|
T Consensus       790 ~hr~~igsq~lLnw~~QIAkgM~YLe~qr---lVHrdLaaRNVLVksP~hvkitdfgla~ll~~d~~ey~~~~gK~pikw  866 (1177)
T KOG1025|consen  790 EHRDNIGSQDLLNWCYQIAKGMKYLEEQR---LVHRDLAARNVLVKSPNHVKITDFGLAKLLAPDEKEYSAPGGKVPIKW  866 (1177)
T ss_pred             HhhccccHHHHHHHHHHHHHHHHHHHhcc---hhhhhhhhhheeecCCCeEEEEecchhhccCcccccccccccccCcHH
Confidence            34667788889999999999999999998   999999999999999999999999999887654332222222335679


Q ss_pred             CCcccccCCCcccccceEehhHHHHHHHh-cccCCCCcCCCcccccccccCCCccccCccccCCcCHHHHHHHHHHHHHh
Q 041793           82 MAPEYASDGKFSVKSDVFSFGILLLEIIS-GKKNRGFYHSDNKLNLIGHVSMPSQLIDPCIQGSFNLVEVIRCIHIGLLC  160 (224)
Q Consensus        82 ~aPE~~~~~~~~~~~Di~slG~il~~l~~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~c  160 (224)
                      +|-|.+....++.++||||||+.+||++| |..|+.+....++..+++...   ++..+    ..-   .+.+..++.+|
T Consensus       867 male~i~~~~~thqSDVWsfGVtiWElmTFGa~Py~gi~~~eI~dlle~ge---RLsqP----piC---tiDVy~~mvkC  936 (1177)
T KOG1025|consen  867 MALESIRIRKYTHQSDVWSFGVTIWELMTFGAKPYDGIPAEEIPDLLEKGE---RLSQP----PIC---TIDVYMVMVKC  936 (1177)
T ss_pred             HHHHHhhccCCCchhhhhhhhhhHHHHHhcCCCccCCCCHHHhhHHHhccc---cCCCC----CCc---cHHHHHHHHHH
Confidence            99999999999999999999999999886 888876655554444443332   22211    111   13466788899


Q ss_pred             ccCCCCCCCChHHHHHHhc
Q 041793          161 VQQHPKDRPSMPSVILMLG  179 (224)
Q Consensus       161 l~~dp~~Rps~~~v~~~L~  179 (224)
                      |..|++.||+|+++...+.
T Consensus       937 wmid~~~rp~fkel~~~fs  955 (1177)
T KOG1025|consen  937 WMIDADSRPTFKELAEEFS  955 (1177)
T ss_pred             hccCcccCccHHHHHHHHH
Confidence            9999999999999988764


No 392
>KOG0612 consensus Rho-associated, coiled-coil containing protein kinase [Signal transduction mechanisms]
Probab=99.85  E-value=1.1e-21  Score=173.10  Aligned_cols=159  Identities=19%  Similarity=0.234  Sum_probs=115.7

Q ss_pred             CCChHHHHHHHHHHHHHHhhhhcCCCCceEecCCCCCceEECCCCCceEeeecceeecCCCCCCCcccccccccccCCcc
Q 041793            6 ILDWPKRFHIICGTARGVMYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDEIEGNTNRVIGTYGYMAPE   85 (224)
Q Consensus         6 ~l~~~~~~~i~~qi~~~l~~Lh~~~~~~i~H~dl~~~nil~~~~~~~kl~df~~~~~~~~~~~~~~~~~~~~~~~y~aPE   85 (224)
                      .+++.-...++..|+.||.-||+.|   +|||||||+|||+|.+|++||+|||.+-.+...+. -.....+||+-|.+||
T Consensus       171 ~~pE~~ArFY~aEiVlAldslH~mg---yVHRDiKPDNvLld~~GHikLADFGsClkm~~dG~-V~s~~aVGTPDYISPE  246 (1317)
T KOG0612|consen  171 RLPEDWARFYTAEIVLALDSLHSMG---YVHRDIKPDNVLLDKSGHIKLADFGSCLKMDADGT-VRSSVAVGTPDYISPE  246 (1317)
T ss_pred             CChHHHHHHHHHHHHHHHHHHHhcc---ceeccCCcceeEecccCcEeeccchhHHhcCCCCc-EEeccccCCCCccCHH
Confidence            6888889999999999999999999   99999999999999999999999999988764332 2244568999999999


Q ss_pred             ccc----C-CCcccccceEehhHHHHHHHhcccCCCCcCCC-cccccccccCCCccccCccccCCcCHHHHHHHHHHHHH
Q 041793           86 YAS----D-GKFSVKSDVFSFGILLLEIISGKKNRGFYHSD-NKLNLIGHVSMPSQLIDPCIQGSFNLVEVIRCIHIGLL  159 (224)
Q Consensus        86 ~~~----~-~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~  159 (224)
                      +++    + +.|...||.||+|+++|||+.|..||....-. ....++.+...-. ++     ...+.  .....+||+.
T Consensus       247 vLqs~~~~~g~yG~ecDwWSlGV~~YEMlyG~TPFYadslveTY~KIm~hk~~l~-FP-----~~~~V--SeeakdLI~~  318 (1317)
T KOG0612|consen  247 VLQSQGDGKGEYGRECDWWSLGVFMYEMLYGETPFYADSLVETYGKIMNHKESLS-FP-----DETDV--SEEAKDLIEA  318 (1317)
T ss_pred             HHHhhcCCccccCCccchhhhHHHHHHHHcCCCcchHHHHHHHHHHHhchhhhcC-CC-----ccccc--CHHHHHHHHH
Confidence            996    2 45789999999999999999999998532111 0011222211101 11     01111  1234456666


Q ss_pred             hccCCCCCCCC---hHHHHHH
Q 041793          160 CVQQHPKDRPS---MPSVILM  177 (224)
Q Consensus       160 cl~~dp~~Rps---~~~v~~~  177 (224)
                      .+ -+|+.|..   ++++...
T Consensus       319 ll-~~~e~RLgrngiedik~H  338 (1317)
T KOG0612|consen  319 LL-CDREVRLGRNGIEDIKNH  338 (1317)
T ss_pred             Hh-cChhhhcccccHHHHHhC
Confidence            55 47888887   8887764


No 393
>KOG0662 consensus Cyclin-dependent kinase CDK5 [Intracellular trafficking, secretion, and vesicular transport; Signal transduction mechanisms]
Probab=99.85  E-value=2.2e-21  Score=140.10  Aligned_cols=169  Identities=23%  Similarity=0.283  Sum_probs=118.8

Q ss_pred             CCCCChHHHHHHHHHHHHHHhhhhcCCCCceEecCCCCCceEECCCCCceEeeecceeecCCCCCCCcccccccccccCC
Q 041793            4 CKILDWPKRFHIICGTARGVMYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDEIEGNTNRVIGTYGYMA   83 (224)
Q Consensus         4 ~~~l~~~~~~~i~~qi~~~l~~Lh~~~~~~i~H~dl~~~nil~~~~~~~kl~df~~~~~~~~~~~~~~~~~~~~~~~y~a   83 (224)
                      ++.++.+....++.|++.||.|+|+.+   ++|||+||.|.++..+|..|++|||+++.+.....  .....+-+.+|++
T Consensus        95 ng~~d~~~~rsfmlqllrgl~fchshn---vlhrdlkpqnllin~ngelkladfglarafgipvr--cysaevvtlwyrp  169 (292)
T KOG0662|consen   95 NGDLDPEIVRSFMLQLLRGLGFCHSHN---VLHRDLKPQNLLINRNGELKLADFGLARAFGIPVR--CYSAEVVTLWYRP  169 (292)
T ss_pred             CCcCCHHHHHHHHHHHHhhhhhhhhhh---hhhccCCcceEEeccCCcEEecccchhhhcCCceE--eeeceeeeeeccC
Confidence            567788889999999999999999999   99999999999999999999999999998765432  2233456889999


Q ss_pred             cccccCCC-cccccceEehhHHHHHHHhcc-cCCCCcCCCcccc-cccccCCC--------ccccCcc----ccCCcCHH
Q 041793           84 PEYASDGK-FSVKSDVFSFGILLLEIISGK-KNRGFYHSDNKLN-LIGHVSMP--------SQLIDPC----IQGSFNLV  148 (224)
Q Consensus        84 PE~~~~~~-~~~~~Di~slG~il~~l~~g~-~p~~~~~~~~~~~-~~~~~~~~--------~~~~~~~----~~~~~~~~  148 (224)
                      |.++.+.+ |+.+.|+||.||++.|+.... +.|.+.+-++... +......+        ..++|-.    .+......
T Consensus       170 pdvlfgakly~tsidmwsagcifaelanagrplfpg~dvddqlkrif~~lg~p~ed~wps~t~lpdyk~yp~ypattsws  249 (292)
T KOG0662|consen  170 PDVLFGAKLYSTSIDMWSAGCIFAELANAGRPLFPGNDVDDQLKRIFRLLGTPTEDQWPSMTKLPDYKPYPIYPATTSWS  249 (292)
T ss_pred             cceeeeeehhccchHhhhcchHHHHHhhcCCCCCCCCcHHHHHHHHHHHhCCCccccCCccccCCCCcccCCccccchHH
Confidence            99998866 789999999999999998644 4443322222111 11111111        1111111    11111111


Q ss_pred             H-----HHHHHHHHHHhccCCCCCCCChHHHHHH
Q 041793          149 E-----VIRCIHIGLLCVQQHPKDRPSMPSVILM  177 (224)
Q Consensus       149 ~-----~~~~~~li~~cl~~dp~~Rps~~~v~~~  177 (224)
                      .     -.+-.++++..+.-+|.+|.+++++++.
T Consensus       250 qivp~lns~grdllqkll~cnp~qrisaeaalqh  283 (292)
T KOG0662|consen  250 QIVPKLNSTGRDLLQKLLKCNPAQRISAEAALQH  283 (292)
T ss_pred             HHhhhhcchhHHHHHHHhccCcccccCHHHHhcC
Confidence            1     1223578889999999999999988654


No 394
>cd05610 STKc_MASTL Catalytic domain of the Protein Serine/Threonine Kinase, Microtubule-associated serine/threonine-like kinase. Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, MAST-like (MASTL) kinases, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. The MASTL kinases in this group carry only a catalytic domain, which contains a long insertion relative to MAST kinases. The human MASTL gene has also been labelled FLJ14813. A missense mutation in FLJ1481
Probab=99.85  E-value=2.1e-21  Score=171.78  Aligned_cols=55  Identities=36%  Similarity=0.587  Sum_probs=51.6

Q ss_pred             CCCCChHHHHHHHHHHHHHHhhhhcCCCCceEecCCCCCceEECCCCCceEeeeccee
Q 041793            4 CKILDWPKRFHIICGTARGVMYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLAR   61 (224)
Q Consensus         4 ~~~l~~~~~~~i~~qi~~~l~~Lh~~~~~~i~H~dl~~~nil~~~~~~~kl~df~~~~   61 (224)
                      .+.+++..++.++.||+.||.|||..+   |+|+||||+||+++.++.++|+|||+++
T Consensus        98 ~~~l~~~~~~~i~~qil~aL~yLH~~g---IiHrDLKP~NILl~~~g~vkL~DFGls~  152 (669)
T cd05610          98 YGYFDEEMAVKYISEVALALDYLHRHG---IIHRDLKPDNMLISNEGHIKLTDFGLSK  152 (669)
T ss_pred             cCCCCHHHHHHHHHHHHHHHHHHHhCC---EEeCCccHHHEEEcCCCCEEEEeCCCCc
Confidence            356889999999999999999999999   9999999999999999999999999875


No 395
>KOG0608 consensus Warts/lats-like serine threonine kinases [Cell cycle control, cell division, chromosome partitioning]
Probab=99.84  E-value=7.2e-21  Score=159.71  Aligned_cols=113  Identities=27%  Similarity=0.404  Sum_probs=95.1

Q ss_pred             CCCCChHHHHHHHHHHHHHHhhhhcCCCCceEecCCCCCceEECCCCCceEeeecceeecCCCCCCC-------------
Q 041793            4 CKILDWPKRFHIICGTARGVMYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDEIEG-------------   70 (224)
Q Consensus         4 ~~~l~~~~~~~i~~qi~~~l~~Lh~~~~~~i~H~dl~~~nil~~~~~~~kl~df~~~~~~~~~~~~~-------------   70 (224)
                      -+.|.+.....++.++.+|+++.|..|   ++||||||+|||||.+|.+||.|||+++-+.+....+             
T Consensus       723 mgIFeE~LARFYIAEltcAiesVHkmG---FIHRDiKPDNILIDrdGHIKLTDFGLCTGfRWTHdskYYq~gdH~RqDSm  799 (1034)
T KOG0608|consen  723 MGIFEEDLARFYIAELTCAIESVHKMG---FIHRDIKPDNILIDRDGHIKLTDFGLCTGFRWTHDSKYYQEGDHHRQDSM  799 (1034)
T ss_pred             hccCHHHHHHHHHHHHHHHHHHHHhcc---ceecccCccceEEccCCceeeeeccccccceeccccccccCCCccccccC
Confidence            356778888889999999999999999   9999999999999999999999999997543210000             


Q ss_pred             ---------------------------cccccccccccCCcccccCCCcccccceEehhHHHHHHHhcccCCCCcC
Q 041793           71 ---------------------------NTNRVIGTYGYMAPEYASDGKFSVKSDVFSFGILLLEIISGKKNRGFYH  119 (224)
Q Consensus        71 ---------------------------~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~  119 (224)
                                                 .....+|+..|+|||++...+++..||.|+.|+|||||+.|+.||....
T Consensus       800 ep~~e~~d~~~~lkvL~~ra~~~h~r~~ahslvgt~nyiapevl~r~g~~q~cdwws~gvil~em~~g~~pf~~~t  875 (1034)
T KOG0608|consen  800 EPSPEWADISKCLKVLERRAMRQHQRILAHSLVGTPNYIAPEVLARTGYTQLCDWWSVGVILYEMLVGQPPFLADT  875 (1034)
T ss_pred             CCchhhccccccchHHHHHHHhhhhhhhhhhhcCCCcccChHHhcccCccccchhhHhhHHHHHHhhCCCCccCCC
Confidence                                       0112378999999999999999999999999999999999999986433


No 396
>PLN03224 probable serine/threonine protein kinase; Provisional
Probab=99.83  E-value=1.6e-20  Score=159.74  Aligned_cols=163  Identities=20%  Similarity=0.125  Sum_probs=108.1

Q ss_pred             CCChHHHHHHHHHHHHHHhhhhcCCCCceEecCCCCCceEECCCCCceEeeecceeecCCCCCCCcccccccccccCCcc
Q 041793            6 ILDWPKRFHIICGTARGVMYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDEIEGNTNRVIGTYGYMAPE   85 (224)
Q Consensus         6 ~l~~~~~~~i~~qi~~~l~~Lh~~~~~~i~H~dl~~~nil~~~~~~~kl~df~~~~~~~~~~~~~~~~~~~~~~~y~aPE   85 (224)
                      .+++..+..++.|++.||.|||+.+   |+||||||.||+++.++.++++|||++......... .......++.|++||
T Consensus       305 ~~~~~~~~~i~~ql~~aL~~lH~~~---ivHrDLKp~NILl~~~~~~kL~DFGla~~~~~~~~~-~~~~g~~tp~Y~aPE  380 (507)
T PLN03224        305 KRDINVIKGVMRQVLTGLRKLHRIG---IVHRDIKPENLLVTVDGQVKIIDFGAAVDMCTGINF-NPLYGMLDPRYSPPE  380 (507)
T ss_pred             cCCHHHHHHHHHHHHHHHHHHHHCC---eecCCCchHhEEECCCCcEEEEeCcCccccccCCcc-CccccCCCcceeChh
Confidence            4578889999999999999999999   999999999999999999999999998654322111 111123467899999


Q ss_pred             cccCCCc----------------------ccccceEehhHHHHHHHhccc-CCCCcCCCccc-----ccccccC-CCccc
Q 041793           86 YASDGKF----------------------SVKSDVFSFGILLLEIISGKK-NRGFYHSDNKL-----NLIGHVS-MPSQL  136 (224)
Q Consensus        86 ~~~~~~~----------------------~~~~Di~slG~il~~l~~g~~-p~~~~~~~~~~-----~~~~~~~-~~~~~  136 (224)
                      .+.....                      ..+.|+||+||++++|++|.. |+......+..     .....+. .....
T Consensus       381 ~l~~~~~~~~~~~~~~~~~l~~~~~~yg~~~~~DvwSlGvil~em~~~~l~p~~~~~~f~~~~~~~~~~~~~~r~~~~~~  460 (507)
T PLN03224        381 ELVMPQSCPRAPAPAMAALLSPFAWLYGRPDLFDSYTAGVLLMQMCVPELRPVANIRLFNTELRQYDNDLNRWRMYKGQK  460 (507)
T ss_pred             hhcCCCCCCccchhhhhhhhhhhHHhcCCCCccchhhHHHHHHHHHhCCCCCccchhhhhhHHhhccchHHHHHhhcccC
Confidence            8753221                      134699999999999999875 55321111100     0000000 00111


Q ss_pred             cCccccCCcCHHHHHHHHHHHHHhccCCC---CCCCChHHHHH
Q 041793          137 IDPCIQGSFNLVEVIRCIHIGLLCVQQHP---KDRPSMPSVIL  176 (224)
Q Consensus       137 ~~~~~~~~~~~~~~~~~~~li~~cl~~dp---~~Rps~~~v~~  176 (224)
                      .+....    ........+|+.+||..+|   .+|+|++|+++
T Consensus       461 ~~~~~~----d~~s~~~~dLi~~LL~~~~~~~~~RlSa~eaL~  499 (507)
T PLN03224        461 YDFSLL----DRNKEAGWDLACKLITKRDQANRGRLSVGQALS  499 (507)
T ss_pred             CCcccc----cccChHHHHHHHHHhccCCCCcccCCCHHHHhC
Confidence            111100    0112346788889999766   68999999975


No 397
>KOG1290 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.83  E-value=4.5e-21  Score=156.35  Aligned_cols=101  Identities=16%  Similarity=0.219  Sum_probs=72.6

Q ss_pred             cccccCCcccccCCCcccccceEehhHHHHHHHhcccCCCCcCCCcccccccccC--------CCc----------cccC
Q 041793           77 GTYGYMAPEYASDGKFSVKSDVFSFGILLLEIISGKKNRGFYHSDNKLNLIGHVS--------MPS----------QLID  138 (224)
Q Consensus        77 ~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~--------~~~----------~~~~  138 (224)
                      .|..|++||++.+.+|+..+||||++|++|||+||.+.|......+...-..++.        ++.          .++.
T Consensus       413 QTRQYRapEVllGsgY~~~ADiWS~AC~~FELaTGDyLFePhsG~~Y~rDEDHiA~i~ELLG~iPr~ia~~Gk~SRdFFn  492 (590)
T KOG1290|consen  413 QTRQYRAPEVLLGSGYSTSADIWSTACMAFELATGDYLFEPHSGENYSRDEDHIALIMELLGKIPRKIALGGKYSRDFFN  492 (590)
T ss_pred             hhhhccCcceeecCCCCCchhHHHHHHHHHHhhcCceeecCCCCCCCCccHHHHHHHHHHHhhccHHHHhcCcchHhhhc
Confidence            4567999999999999999999999999999999999987655443211100000        000          0000


Q ss_pred             c-------------------cccCCcCHHHHHHHHHHHHHhccCCCCCCCChHHHHHH
Q 041793          139 P-------------------CIQGSFNLVEVIRCIHIGLLCVQQHPKDRPSMPSVILM  177 (224)
Q Consensus       139 ~-------------------~~~~~~~~~~~~~~~~li~~cl~~dp~~Rps~~~v~~~  177 (224)
                      .                   .-...++.+++..+.+++.-||+.+|++|||+.+.++.
T Consensus       493 r~G~LrhI~~LK~WpL~~VL~eKY~~s~e~A~~fsdFL~PmLef~PeKR~tA~~cl~h  550 (590)
T KOG1290|consen  493 RRGELRHIRRLKPWPLYEVLIEKYEWSEEDAQQFSDFLSPMLEFDPEKRPTAAQCLKH  550 (590)
T ss_pred             cccceecccccCCCcHHHHHHHHhCCCHHHHHHHHHHHHHHHhcCccccccHHHHhcC
Confidence            0                   01234466778889999999999999999999999753


No 398
>cd00180 PKc Catalytic domain of Protein Kinases. Protein Kinases (PKs), catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The PK family is part of a larger superfamily that includes the catalytic domains of RIO kinases, aminoglycoside phosphotransferase, choline kinase, phosphoinositide 3-kinase (PI3K), and actin-fragmin kinase. PKs make up a large family of serine/threonine kinases, protein tyrosine kinases (PTKs), and dual-specificity PKs that phosphorylate both serine/threonine and tyrosine residues of target proteins. Majority of protein phosphorylation, about 95%, occurs on serine residues while only 1% occurs on tyrosine residues. Protein phosphorylation is a mechanism by which a wide variety of cellular proteins, such as enzymes and membrane channels, are reversibly regulated in response to certain stimuli. PKs often function as components of signal transduction pathways in which
Probab=99.83  E-value=2.9e-20  Score=140.79  Aligned_cols=126  Identities=34%  Similarity=0.553  Sum_probs=108.1

Q ss_pred             CCCChHHHHHHHHHHHHHHhhhhcCCCCceEecCCCCCceEECC-CCCceEeeecceeecCCCCCCCcccccccccccCC
Q 041793            5 KILDWPKRFHIICGTARGVMYLHQDSRLRIIHRDLKASNVLLDQ-DMNPKISDFGLARAFGGDEIEGNTNRVIGTYGYMA   83 (224)
Q Consensus         5 ~~l~~~~~~~i~~qi~~~l~~Lh~~~~~~i~H~dl~~~nil~~~-~~~~kl~df~~~~~~~~~~~~~~~~~~~~~~~y~a   83 (224)
                      ..+++..++.++.+++.++.+||+.|   ++|+||++.||+++. .+.++++||+.+........  ......+...|.+
T Consensus        87 ~~~~~~~~~~~~~~l~~~l~~lh~~~---~~H~dl~~~ni~~~~~~~~~~l~d~~~~~~~~~~~~--~~~~~~~~~~~~~  161 (215)
T cd00180          87 GKLSEDEILRILLQILEGLEYLHSNG---IIHRDLKPENILLDSDNGKVKLADFGLSKLLTSDKS--LLKTIVGTPAYMA  161 (215)
T ss_pred             CCCCHHHHHHHHHHHHHHHHHHHhCC---eeccCCCHhhEEEeCCCCcEEEecCCceEEccCCcc--hhhcccCCCCccC
Confidence            36889999999999999999999999   999999999999998 89999999999987644321  1222345678999


Q ss_pred             cccccCC-CcccccceEehhHHHHHHHhcccCCCCcCCCcccccccccCCCccccCccccCCcCHHHHHHHHHHHHHhcc
Q 041793           84 PEYASDG-KFSVKSDVFSFGILLLEIISGKKNRGFYHSDNKLNLIGHVSMPSQLIDPCIQGSFNLVEVIRCIHIGLLCVQ  162 (224)
Q Consensus        84 PE~~~~~-~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~  162 (224)
                      ||.+... ..+.+.|+|++|++++++                                          ..+.+++..|++
T Consensus       162 pe~~~~~~~~~~~~D~~~lg~~~~~l------------------------------------------~~~~~~l~~~l~  199 (215)
T cd00180         162 PEVLLGKGYYSEKSDIWSLGVILYEL------------------------------------------PELKDLIRKMLQ  199 (215)
T ss_pred             hhHhcccCCCCchhhhHHHHHHHHHH------------------------------------------HHHHHHHHHHhh
Confidence            9998776 778999999999999998                                          356788889999


Q ss_pred             CCCCCCCChHHHHHH
Q 041793          163 QHPKDRPSMPSVILM  177 (224)
Q Consensus       163 ~dp~~Rps~~~v~~~  177 (224)
                      .||++||++.++++.
T Consensus       200 ~~p~~R~~~~~l~~~  214 (215)
T cd00180         200 KDPEKRPSAKEILEH  214 (215)
T ss_pred             CCcccCcCHHHHhhC
Confidence            999999999999864


No 399
>KOG1345 consensus Serine/threonine kinase [Signal transduction mechanisms]
Probab=99.83  E-value=5.2e-21  Score=146.07  Aligned_cols=174  Identities=22%  Similarity=0.304  Sum_probs=112.8

Q ss_pred             CChHHHHHHHHHHHHHHhhhhcCCCCceEecCCCCCceEECC--CCCceEeeecceeecCCCCCCCcccccccccccCCc
Q 041793            7 LDWPKRFHIICGTARGVMYLHQDSRLRIIHRDLKASNVLLDQ--DMNPKISDFGLARAFGGDEIEGNTNRVIGTYGYMAP   84 (224)
Q Consensus         7 l~~~~~~~i~~qi~~~l~~Lh~~~~~~i~H~dl~~~nil~~~--~~~~kl~df~~~~~~~~~~~~~~~~~~~~~~~y~aP   84 (224)
                      +-+.--.+++.|+++||.|||+++   ++|||||.+||||-.  ...+||+|||..+..+..     .........|.+|
T Consensus       118 igE~~~K~v~~ql~SAi~fMHskn---lVHRdlK~eNiLif~~df~rvKlcDFG~t~k~g~t-----V~~~~~~~~y~~p  189 (378)
T KOG1345|consen  118 IGEANTKKVFAQLLSAIEFMHSKN---LVHRDLKAENILIFDADFYRVKLCDFGLTRKVGTT-----VKYLEYVNNYHAP  189 (378)
T ss_pred             ccHHHHHHHHHHHHHHHHHhhccc---hhhcccccceEEEecCCccEEEeeecccccccCce-----ehhhhhhcccCCc
Confidence            345556789999999999999999   999999999999953  246899999998764321     1122335678999


Q ss_pred             ccccC---CC--cccccceEehhHHHHHHHhcccCCCCcCCCcccccccccCCCccccCccccCCcCHHHHHHHHHHHHH
Q 041793           85 EYASD---GK--FSVKSDVFSFGILLLEIISGKKNRGFYHSDNKLNLIGHVSMPSQLIDPCIQGSFNLVEVIRCIHIGLL  159 (224)
Q Consensus        85 E~~~~---~~--~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~  159 (224)
                      |....   +.  ..+..|+|.||++++.+++|+.||+....++....-...+.....  +.++..+..- ..++.++.++
T Consensus       190 e~~~~~~ne~~~~~ps~D~WqfGIi~f~cltG~~PWQka~~~d~~Y~~~~~w~~rk~--~~~P~~F~~f-s~~a~r~Fkk  266 (378)
T KOG1345|consen  190 ELCDTVVNEKLVVNPSTDIWQFGIIFFYCLTGKFPWQKASIMDKPYWEWEQWLKRKN--PALPKKFNPF-SEKALRLFKK  266 (378)
T ss_pred             HHHhhccccceEecccccchheeeeeeeeecCCCcchhhhccCchHHHHHHHhcccC--ccCchhhccc-CHHHHHHHHH
Confidence            97643   22  357899999999999999999999854444433221111111111  1111111111 1345677789


Q ss_pred             hccCCCCCC---CChHHHHHHhccCCCCCCCCCCC
Q 041793          160 CVQQHPKDR---PSMPSVILMLGSEIVLPQPKQPG  191 (224)
Q Consensus       160 cl~~dp~~R---ps~~~v~~~L~~~~~~~~~~~p~  191 (224)
                      -|..++++|   -+++...+.+-.+..+...+.|.
T Consensus       267 ~lt~~~~drcki~~~kk~rk~~w~E~~i~t~k~~e  301 (378)
T KOG1345|consen  267 SLTPRFKDRCKIWTAKKMRKCLWKEKLIKTVKRPE  301 (378)
T ss_pred             hcCCcccccchhHHHHHHHHHHHHHhhhccccChh
Confidence            999999999   44554444443333344444444


No 400
>KOG0668 consensus Casein kinase II, alpha subunit [Signal transduction mechanisms; Cell cycle control, cell division, chromosome partitioning; Transcription]
Probab=99.82  E-value=2.6e-20  Score=139.21  Aligned_cols=160  Identities=21%  Similarity=0.252  Sum_probs=113.5

Q ss_pred             CCChHHHHHHHHHHHHHHhhhhcCCCCceEecCCCCCceEECC-CCCceEeeecceeecCCCCCCCcccccccccccCCc
Q 041793            6 ILDWPKRFHIICGTARGVMYLHQDSRLRIIHRDLKASNVLLDQ-DMNPKISDFGLARAFGGDEIEGNTNRVIGTYGYMAP   84 (224)
Q Consensus         6 ~l~~~~~~~i~~qi~~~l~~Lh~~~~~~i~H~dl~~~nil~~~-~~~~kl~df~~~~~~~~~~~~~~~~~~~~~~~y~aP   84 (224)
                      .|+.-.+...+.+++.||.|||+.|   |.|||+||.|++++. .-.++|.|+|+|.++..+.   .....+.+..|-.|
T Consensus       128 tl~d~dIryY~~elLkALdyCHS~G---ImHRDVKPhNvmIdh~~rkLrlIDWGLAEFYHp~~---eYnVRVASRyfKGP  201 (338)
T KOG0668|consen  128 TLTDYDIRYYIYELLKALDYCHSMG---IMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGK---EYNVRVASRYFKGP  201 (338)
T ss_pred             hhchhhHHHHHHHHHHHHhHHHhcC---cccccCCcceeeechhhceeeeeecchHhhcCCCc---eeeeeeehhhcCCc
Confidence            3556677888999999999999999   999999999999985 4568999999999875432   23334556667899


Q ss_pred             ccccC-CCcccccceEehhHHHHHHHhcccCCCCcCCCccccccc--ccC---------------CCc------------
Q 041793           85 EYASD-GKFSVKSDVFSFGILLLEIISGKKNRGFYHSDNKLNLIG--HVS---------------MPS------------  134 (224)
Q Consensus        85 E~~~~-~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~--~~~---------------~~~------------  134 (224)
                      |++.. ..++.+.|+|||||++..|++.+.||-...+ +..+++.  .+.               ...            
T Consensus       202 ELLVdy~~YDYSLD~WS~GcmlA~miFrkepFFhG~d-N~DQLVkIakVLGt~el~~Yl~KY~i~Ldp~~~~i~~~~~rk  280 (338)
T KOG0668|consen  202 ELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHD-NYDQLVKIAKVLGTDELYAYLNKYQIDLDPQFEDILGRHSRK  280 (338)
T ss_pred             hheeechhccccHHHHHHHHHHHHHHhccCcccCCCC-CHHHHHHHHHHhChHHHHHHHHHHccCCChhHhhHhhccccc
Confidence            98865 4578999999999999999999988843222 2222211  110               000            


Q ss_pred             ---cccCccccCCcCHHHHHHHHHHHHHhccCCCCCCCChHHHHH
Q 041793          135 ---QLIDPCIQGSFNLVEVIRCIHIGLLCVQQHPKDRPSMPSVIL  176 (224)
Q Consensus       135 ---~~~~~~~~~~~~~~~~~~~~~li~~cl~~dp~~Rps~~~v~~  176 (224)
                         ..+...-....    .-..++++.+.|.+|-.+|+|++|+..
T Consensus       281 ~w~~Fi~~~n~hl~----~peaiDlldklLrYDHqeRlTakEam~  321 (338)
T KOG0668|consen  281 PWSRFINSENQHLV----SPEAIDLLDKLLRYDHQERLTAKEAMA  321 (338)
T ss_pred             cHHHhCCccccccC----ChHHHHHHHHHHhhccccccchHHHhc
Confidence               00011111111    124567888999999999999999865


No 401
>KOG0587 consensus Traf2- and Nck-interacting kinase and related germinal center kinase (GCK) family protein kinases [Signal transduction mechanisms]
Probab=99.81  E-value=6.8e-20  Score=158.30  Aligned_cols=161  Identities=27%  Similarity=0.363  Sum_probs=123.8

Q ss_pred             CCCCChHHHHHHHHHHHHHHhhhhcCCCCceEecCCCCCceEECCCCCceEeeecceeecCCCCCCCcccccccccccCC
Q 041793            4 CKILDWPKRFHIICGTARGVMYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDEIEGNTNRVIGTYGYMA   83 (224)
Q Consensus         4 ~~~l~~~~~~~i~~qi~~~l~~Lh~~~~~~i~H~dl~~~nil~~~~~~~kl~df~~~~~~~~~~~~~~~~~~~~~~~y~a   83 (224)
                      +..+.|+.+.-|+..++.|+.+||...   ++|||||-.||++..+|.+||.|||++..+...  ...-.+..|++.|+|
T Consensus       117 g~rl~E~~IaYI~re~lrgl~HLH~nk---viHRDikG~NiLLT~e~~VKLvDFGvSaQldsT--~grRnT~iGtP~WMA  191 (953)
T KOG0587|consen  117 GNRLKEEWIAYILREILRGLAHLHNNK---VIHRDIKGQNVLLTENAEVKLVDFGVSAQLDST--VGRRNTFIGTPYWMA  191 (953)
T ss_pred             ccchhhHHHHHHHHHHHHHHHHHhhcc---eeeecccCceEEEeccCcEEEeeeeeeeeeecc--cccccCcCCCccccc
Confidence            567899999999999999999999998   999999999999999999999999998765432  223344689999999


Q ss_pred             cccccCC-----CcccccceEehhHHHHHHHhcccCCCCcCCCcccccccccCCCccccCccccCCcCHHHHHHHHHHHH
Q 041793           84 PEYASDG-----KFSVKSDVFSFGILLLEIISGKKNRGFYHSDNKLNLIGHVSMPSQLIDPCIQGSFNLVEVIRCIHIGL  158 (224)
Q Consensus        84 PE~~~~~-----~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~  158 (224)
                      ||++...     .|+..+|+||||++..||..|.+|+...++....-.+     +...+..-.++..+   ...+.++|.
T Consensus       192 PEViac~e~~d~tyd~R~D~WsLGITaIEladG~PPl~DmHPmraLF~I-----pRNPPPkLkrp~kW---s~~FndFIs  263 (953)
T KOG0587|consen  192 PEVIACDESPDATYDYRSDLWSLGITAIEMAEGAPPLCDMHPMRALFLI-----PRNPPPKLKRPKKW---SKKFNDFIS  263 (953)
T ss_pred             ceeeecccCCCCCcccccchhhccceeehhcCCCCCccCcchhhhhccC-----CCCCCccccchhhH---HHHHHHHHH
Confidence            9998543     3678899999999999999999997544433222111     11111111112222   456778889


Q ss_pred             HhccCCCCCCCChHHHHHH
Q 041793          159 LCVQQHPKDRPSMPSVILM  177 (224)
Q Consensus       159 ~cl~~dp~~Rps~~~v~~~  177 (224)
                      .||..|.++||++.++++.
T Consensus       264 ~cL~Kd~e~RP~~~~ll~h  282 (953)
T KOG0587|consen  264 TCLVKDYEQRPSTEELLKH  282 (953)
T ss_pred             HHHhhccccCcchhhhccC
Confidence            9999999999999998763


No 402
>KOG0590 consensus Checkpoint kinase and related serine/threonine protein kinases [Cell cycle control, cell division, chromosome partitioning]
Probab=99.80  E-value=5.3e-20  Score=159.59  Aligned_cols=167  Identities=23%  Similarity=0.264  Sum_probs=123.8

Q ss_pred             CCCChHHHHHHHHHHHHHHhhhhcCCCCceEecCCCCCceEECCCCCceEeeecceeecCCCCCC--CcccccccccccC
Q 041793            5 KILDWPKRFHIICGTARGVMYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDEIE--GNTNRVIGTYGYM   82 (224)
Q Consensus         5 ~~l~~~~~~~i~~qi~~~l~~Lh~~~~~~i~H~dl~~~nil~~~~~~~kl~df~~~~~~~~~~~~--~~~~~~~~~~~y~   82 (224)
                      +.+....+--++.|++.|++|||+.|   |.|||+|++|+++..+|.+|++|||.+..+......  .......|+-.|+
T Consensus       415 ~~~~~~e~~c~fKqL~~Gv~y~h~~G---iahrdlK~enll~~~~g~lki~Dfg~~~vf~~~~e~~~~~~~g~~gS~pY~  491 (601)
T KOG0590|consen  415 GKLTPLEADCFFKQLLRGVKYLHSMG---LAHRDLKLENLLVTENGILKIIDFGAASVFRYPWEKNIHESSGIVGSDPYL  491 (601)
T ss_pred             cccchhhhhHHHHHHHHHHHHHHhcC---ceeccCccccEEEecCCceEEeecCcceeeccCcchhhhhhcCcccCCcCc
Confidence            36777888889999999999999999   999999999999999999999999998866543322  3334467888999


Q ss_pred             CcccccCCCcc-cccceEehhHHHHHHHhcccCCCCcCCCcccccccccCCCccccCccccCCcCHHHHHHHHHHHHHhc
Q 041793           83 APEYASDGKFS-VKSDVFSFGILLLEIISGKKNRGFYHSDNKLNLIGHVSMPSQLIDPCIQGSFNLVEVIRCIHIGLLCV  161 (224)
Q Consensus        83 aPE~~~~~~~~-~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl  161 (224)
                      |||.+.+..|. ...||||.|+++..|.+|+.||......+...................+  ..-........+|.+||
T Consensus       492 apE~~~~~~ydpr~vDiwS~~ii~~~m~~~~~~Wk~a~~~~~~~~~~~~~~~~~~~~~~~~--~~~~lp~~~~~~~~~~l  569 (601)
T KOG0590|consen  492 APEVLTGKEYDPRAVDVWSCGIIYICMILGRFPWKVAKKSDNSFKTNNYSDQRNIFEGPNR--LLSLLPRETRIIIYRML  569 (601)
T ss_pred             CcccccccccCcchhhhhhccceEEEEecCCCccccccccccchhhhccccccccccChHH--HHHhchhhHHHHHHHHc
Confidence            99999999987 5689999999999999999998765444332101011111111110000  01111235578899999


Q ss_pred             cCCCCCCCChHHHHH
Q 041793          162 QQHPKDRPSMPSVIL  176 (224)
Q Consensus       162 ~~dp~~Rps~~~v~~  176 (224)
                      +.||.+|.++++|++
T Consensus       570 ~~~P~~R~ti~~i~~  584 (601)
T KOG0590|consen  570 QLDPTKRITIEQILN  584 (601)
T ss_pred             cCChhheecHHHHhh
Confidence            999999999999976


No 403
>KOG1152 consensus Signal transduction serine/threonine kinase with PAS/PAC sensor domain [Signal transduction mechanisms]
Probab=99.76  E-value=3.3e-19  Score=148.25  Aligned_cols=107  Identities=30%  Similarity=0.423  Sum_probs=94.6

Q ss_pred             CCCCCChHHHHHHHHHHHHHHhhhhcCCCCceEecCCCCCceEECCCCCceEeeecceeecCCCCCCCcccccccccccC
Q 041793            3 RCKILDWPKRFHIICGTARGVMYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDEIEGNTNRVIGTYGYM   82 (224)
Q Consensus         3 ~~~~l~~~~~~~i~~qi~~~l~~Lh~~~~~~i~H~dl~~~nil~~~~~~~kl~df~~~~~~~~~~~~~~~~~~~~~~~y~   82 (224)
                      .+..+++.+...|+.||+.|+++||++|   |+|||||-+|+.++.+|.+||.|||.+.....+    ....+.||..|.
T Consensus       663 ~kp~m~E~eAk~IFkQV~agi~hlh~~~---ivhrdikdenvivd~~g~~klidfgsaa~~ksg----pfd~f~gtv~~a  735 (772)
T KOG1152|consen  663 FKPRMDEPEAKLIFKQVVAGIKHLHDQG---IVHRDIKDENVIVDSNGFVKLIDFGSAAYTKSG----PFDVFVGTVDYA  735 (772)
T ss_pred             ccCccchHHHHHHHHHHHhccccccccC---ceecccccccEEEecCCeEEEeeccchhhhcCC----Ccceeeeecccc
Confidence            4567889999999999999999999999   999999999999999999999999998765433    244578999999


Q ss_pred             CcccccCCCcc-cccceEehhHHHHHHHhcccCCC
Q 041793           83 APEYASDGKFS-VKSDVFSFGILLLEIISGKKNRG  116 (224)
Q Consensus        83 aPE~~~~~~~~-~~~Di~slG~il~~l~~g~~p~~  116 (224)
                      |||++.|.+|- ..-|||++|+++|.++....||.
T Consensus       736 apevl~g~~y~gk~qdiwalgillytivykenpyy  770 (772)
T KOG1152|consen  736 APEVLGGEKYLGKPQDIWALGILLYTIVYKENPYY  770 (772)
T ss_pred             chhhhCCCccCCCcchhhhhhheeeEEEeccCCCc
Confidence            99999999986 55799999999999998888864


No 404
>KOG1023 consensus Natriuretic peptide receptor, guanylate cyclase [Signal transduction mechanisms]
Probab=99.74  E-value=3.7e-18  Score=142.68  Aligned_cols=175  Identities=23%  Similarity=0.286  Sum_probs=124.8

Q ss_pred             CCCCCChHHHHHHHHHHHHHHhhhhcCCCCceEecCCCCCceEECCCCCceEeeecceeecCCCCCCCcccccccccccC
Q 041793            3 RCKILDWPKRFHIICGTARGVMYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDEIEGNTNRVIGTYGYM   82 (224)
Q Consensus         3 ~~~~l~~~~~~~i~~qi~~~l~~Lh~~~~~~i~H~dl~~~nil~~~~~~~kl~df~~~~~~~~~~~~~~~~~~~~~~~y~   82 (224)
                      ....+++-++..++.+|+.||.|||....  .+|+.+++.||+++....+|++|||+.................-...|.
T Consensus        41 ~~~~~d~~F~~s~~rdi~~Gl~ylh~s~i--~~hg~l~s~nClvd~~w~lklt~~Gl~~~~~~~~~~~~~~~~~~~~lw~  118 (484)
T KOG1023|consen   41 EDIKLDYFFILSFIRDISKGLAYLHNSPI--GYHGALKSSNCLVDSRWVLKLTDFGLNSLLEETAEPEAHHPIRKALLWT  118 (484)
T ss_pred             cccCccHHHHHHHHHHHHHHHHHHhcCcc--eeeeeeccccceeeeeEEEEechhhhcccccccccccccchhHHHHhcc
Confidence            34568888999999999999999999861  3999999999999999999999999987754211111111122345799


Q ss_pred             CcccccCCC-------cccccceEehhHHHHHHHhcccCCCCcCCCcc-cccccccCC-CccccCccccCCcCHHHHHHH
Q 041793           83 APEYASDGK-------FSVKSDVFSFGILLLEIISGKKNRGFYHSDNK-LNLIGHVSM-PSQLIDPCIQGSFNLVEVIRC  153 (224)
Q Consensus        83 aPE~~~~~~-------~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~-~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~  153 (224)
                      |||++++..       .+.++|+||||++++|+++.+.||........ .+++..+.. ....+.+......  +....+
T Consensus       119 aPellr~~~~~~~~~~~~~~gdiYs~~ii~~ei~~r~~~~~~~~~~~~~~eii~~~~~~~~~~~rP~i~~~~--e~~~~l  196 (484)
T KOG1023|consen  119 APELLRGALSQSLESALTQKGDIYSFGIIMYEILFRSGPFDLRNLVEDPDEIILRVKKGGSNPFRPSIELLN--ELPPEL  196 (484)
T ss_pred             CHHHhcccccccccccccccCCeehHHHHHHHHHhccCccccccccCChHHHHHHHHhcCCCCcCcchhhhh--hcchHH
Confidence            999997631       46789999999999999999999876333222 223322222 2222232222111  111257


Q ss_pred             HHHHHHhccCCCCCCCChHHHHHHhccC
Q 041793          154 IHIGLLCVQQHPKDRPSMPSVILMLGSE  181 (224)
Q Consensus       154 ~~li~~cl~~dp~~Rps~~~v~~~L~~~  181 (224)
                      ..++.+||..+|+.||+++.|...++..
T Consensus       197 ~~l~~~cw~e~P~~rPs~~~i~~~~~~~  224 (484)
T KOG1023|consen  197 LLLVARCWEEIPEKRPSIEQIRSKLLTI  224 (484)
T ss_pred             HHHHHHhcccChhhCccHHHHHhhhhhh
Confidence            8889999999999999999999888655


No 405
>KOG1167 consensus Serine/threonine protein kinase of the CDC7 subfamily involved in DNA synthesis, repair and recombination [Replication, recombination and repair]
Probab=99.73  E-value=6.6e-18  Score=135.68  Aligned_cols=110  Identities=26%  Similarity=0.394  Sum_probs=87.3

Q ss_pred             CCCChHHHHHHHHHHHHHHhhhhcCCCCceEecCCCCCceEECCC-CCceEeeecceeecCCC--------------CC-
Q 041793            5 KILDWPKRFHIICGTARGVMYLHQDSRLRIIHRDLKASNVLLDQD-MNPKISDFGLARAFGGD--------------EI-   68 (224)
Q Consensus         5 ~~l~~~~~~~i~~qi~~~l~~Lh~~~~~~i~H~dl~~~nil~~~~-~~~kl~df~~~~~~~~~--------------~~-   68 (224)
                      ..++..++...+..++.||.++|.+|   |+||||||.|++.+.. +.-.|.|||++......              .. 
T Consensus       127 ~~l~~~~i~~Yl~~ll~Al~~~h~~G---IvHRDiKpsNFL~n~~t~rg~LvDFgLA~~~d~~~~~~~s~~~~~~~~~~~  203 (418)
T KOG1167|consen  127 RSLSLAEIRWYLRNLLKALAHLHKNG---IVHRDIKPSNFLYNRRTQRGVLVDFGLAQRYDGYQQTEHSRSYSGRHATPA  203 (418)
T ss_pred             hcCCHHHHHHHHHHHHHHhhhhhccC---ccccCCCccccccccccCCceEEechhHHHHHhhhhhhhhhhhhcccCCcc
Confidence            45778899999999999999999999   9999999999999743 55689999999832100              00 


Q ss_pred             ---------------------------CCcccccccccccCCccccc-CCCcccccceEehhHHHHHHHhcccCCCC
Q 041793           69 ---------------------------EGNTNRVIGTYGYMAPEYAS-DGKFSVKSDVFSFGILLLEIISGKKNRGF  117 (224)
Q Consensus        69 ---------------------------~~~~~~~~~~~~y~aPE~~~-~~~~~~~~Di~slG~il~~l~~g~~p~~~  117 (224)
                                                 ...-....||++|+|||++. ....+.+.||||.|+|++.++++..||-.
T Consensus       204 ~g~~~~~~~~~~~~~p~g~~~~~~~~r~~~~anrAGT~GfRaPEvL~k~~~QttaiDiws~GVI~Lslls~~~PFf~  280 (418)
T KOG1167|consen  204 MGKDVHCQSVATASKPAGYYRRCNDGRPSERANRAGTPGFRAPEVLFRCPRQTTAIDIWSAGVILLSLLSRRYPFFK  280 (418)
T ss_pred             ccCcccccccccccCCCCceeccCCCccceecccCCCCCCCchHHHhhccCcCCccceeeccceeehhhcccccccc
Confidence                                       00001136899999999875 45578999999999999999999999854


No 406
>smart00221 STYKc Protein kinase; unclassified specificity. Phosphotransferases. The specificity of this class of kinases can not be predicted. Possible dual-specificity Ser/Thr/Tyr kinase.
Probab=99.70  E-value=3.2e-17  Score=125.87  Aligned_cols=107  Identities=33%  Similarity=0.440  Sum_probs=91.1

Q ss_pred             CChHHHHHHHHHHHHHHhhhhcCCCCceEecCCCCCceEECCCCCceEeeecceeecCCCCCCCcccccccccccCCccc
Q 041793            7 LDWPKRFHIICGTARGVMYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDEIEGNTNRVIGTYGYMAPEY   86 (224)
Q Consensus         7 l~~~~~~~i~~qi~~~l~~Lh~~~~~~i~H~dl~~~nil~~~~~~~kl~df~~~~~~~~~~~~~~~~~~~~~~~y~aPE~   86 (224)
                      +++..++.++.+++.++.+||+.+   ++|+|+++.|++++.++.++++|||.+......... ......+...|++||.
T Consensus        95 ~~~~~~~~~~~~l~~~l~~lh~~~---i~h~di~~~ni~v~~~~~~~l~d~g~~~~~~~~~~~-~~~~~~~~~~~~~pe~  170 (225)
T smart00221       95 LSEEEARFYLRQILEALEYLHSLG---IVHRDLKPENILLGMDGLVKLADFGLARFIHRDLAA-LLKTVKGTPFYLAPEV  170 (225)
T ss_pred             CCHHHHHHHHHHHHHHHHHHHhCC---eecCCCCHHHEEEcCCCCEEEeeCceeeEecCcccc-cccceeccCCcCCHhH
Confidence            789999999999999999999998   999999999999999999999999999876543210 1122355678999999


Q ss_pred             c-cCCCcccccceEehhHHHHHHHhcccCCCC
Q 041793           87 A-SDGKFSVKSDVFSFGILLLEIISGKKNRGF  117 (224)
Q Consensus        87 ~-~~~~~~~~~Di~slG~il~~l~~g~~p~~~  117 (224)
                      + ....++.+.|+|+||++++++++|+.||..
T Consensus       171 ~~~~~~~~~~~Dv~~lG~~~~~l~~g~~pf~~  202 (225)
T smart00221      171 LLGGKGYGEAVDIWSLGVILYELLWGPEPFSG  202 (225)
T ss_pred             hcCCCCCCchhhHHHHHHHHHHHHHCCCCccc
Confidence            8 566677899999999999999999999843


No 407
>KOG0576 consensus Mitogen-activated protein kinase kinase kinase kinase (MAP4K), germinal center kinase family [Signal transduction mechanisms]
Probab=99.69  E-value=2.6e-17  Score=138.99  Aligned_cols=162  Identities=23%  Similarity=0.318  Sum_probs=122.8

Q ss_pred             CCCCChHHHHHHHHHHHHHHhhhhcCCCCceEecCCCCCceEECCCCCceEeeecceeecCCCCCCCcccccccccccCC
Q 041793            4 CKILDWPKRFHIICGTARGVMYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDEIEGNTNRVIGTYGYMA   83 (224)
Q Consensus         4 ~~~l~~~~~~~i~~qi~~~l~~Lh~~~~~~i~H~dl~~~nil~~~~~~~kl~df~~~~~~~~~~~~~~~~~~~~~~~y~a   83 (224)
                      .++|++-++..+..+.+.||+|||+.|   -+|||||--||++...|.+|++|||.+-.+....  ..-..+.|++.|+|
T Consensus       106 TgplselqiayvcRetl~gl~ylhs~g---k~hRdiKGanilltd~gDvklaDfgvsaqitati--~KrksfiGtpywma  180 (829)
T KOG0576|consen  106 TGPLSELQIAYVCRETLQGLKYLHSQG---KIHRDIKGANILLTDEGDVKLADFGVSAQITATI--AKRKSFIGTPYWMA  180 (829)
T ss_pred             cccchhHHHHHHHhhhhccchhhhcCC---cccccccccceeecccCceeecccCchhhhhhhh--hhhhcccCCccccc
Confidence            468899999999999999999999999   8999999999999999999999999986553221  11233688999999


Q ss_pred             cccc---cCCCcccccceEehhHHHHHHHhcccCCCCcCCCcccccccccCCCccccCccccCCcCHHHHHHHHHHHHHh
Q 041793           84 PEYA---SDGKFSVKSDVFSFGILLLEIISGKKNRGFYHSDNKLNLIGHVSMPSQLIDPCIQGSFNLVEVIRCIHIGLLC  160 (224)
Q Consensus        84 PE~~---~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~c  160 (224)
                      ||+.   +.+.|...+|+|++|+...|+-.-++|.-...+.....++..-............   ...   .+-++++.+
T Consensus       181 pEvaaverkggynqlcdiwa~gitAiel~eLqpplfdlhpmr~l~LmTkS~~qpp~lkDk~k---ws~---~fh~fvK~a  254 (829)
T KOG0576|consen  181 PEVAAVERKGGYNQLCDIWALGITAIELGELQPPLFDLHPMRALFLMTKSGFQPPTLKDKTK---WSE---FFHNFVKGA  254 (829)
T ss_pred             hhHHHHHhcccccccccccccccchhhhhhcCCcccccchHHHHHHhhccCCCCCcccCCcc---chH---HHHHHHHHH
Confidence            9976   4677899999999999999997766665444455444455444333322222111   222   344677799


Q ss_pred             ccCCCCCCCChHHHHH
Q 041793          161 VQQHPKDRPSMPSVIL  176 (224)
Q Consensus       161 l~~dp~~Rps~~~v~~  176 (224)
                      +..+|.+||+++.+++
T Consensus       255 ltknpKkRptaeklL~  270 (829)
T KOG0576|consen  255 LTKNPKKRPTAEKLLQ  270 (829)
T ss_pred             hcCCCccCCChhhhee
Confidence            9999999999988765


No 408
>KOG1164 consensus Casein kinase (serine/threonine/tyrosine protein kinase) [Signal transduction mechanisms]
Probab=99.69  E-value=1.6e-16  Score=129.46  Aligned_cols=169  Identities=20%  Similarity=0.190  Sum_probs=121.3

Q ss_pred             CCCCChHHHHHHHHHHHHHHhhhhcCCCCceEecCCCCCceEECCC-----CCceEeeecceeecC--CCCC----CCc-
Q 041793            4 CKILDWPKRFHIICGTARGVMYLHQDSRLRIIHRDLKASNVLLDQD-----MNPKISDFGLARAFG--GDEI----EGN-   71 (224)
Q Consensus         4 ~~~l~~~~~~~i~~qi~~~l~~Lh~~~~~~i~H~dl~~~nil~~~~-----~~~kl~df~~~~~~~--~~~~----~~~-   71 (224)
                      .+.++..+.++|+.|++.+|++||+.|   ++||||||.|+.++..     ..+.+.|||+++.+.  ....    ... 
T Consensus       116 ~~~fs~~T~l~ia~q~l~~l~~lH~~G---~iHRDiKp~N~~~g~~~~~~~~~~~llDfGlar~~~~~~~~~~~~~~~r~  192 (322)
T KOG1164|consen  116 PGRFSRKTVLRIAIQNLNALEDLHSKG---FIHRDIKPENFVVGQSSRSEVRTLYLLDFGLARRFKYVGDSGGNLRPPRP  192 (322)
T ss_pred             CCCcCHhHHHHHHHHHHHHHHHHHhcC---cccCCcCHHHeeecCCCCcccceEEEEecCCCccccccCCCCcccccCCC
Confidence            478999999999999999999999999   9999999999999865     358999999999432  2111    111 


Q ss_pred             -ccccccccccCCcccccCCCcccccceEehhHHHHHHHhcccCCCCcCCCcccccccccCCCccccCccccCCcCHHHH
Q 041793           72 -TNRVIGTYGYMAPEYASDGKFSVKSDVFSFGILLLEIISGKKNRGFYHSDNKLNLIGHVSMPSQLIDPCIQGSFNLVEV  150 (224)
Q Consensus        72 -~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  150 (224)
                       .....||..|+++....+...+.+.|+||++.++.+++.|..||.......................   .......+.
T Consensus       193 ~~~~~rGT~ry~S~~~H~~~e~~r~DDles~~Y~l~el~~g~LPW~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~  269 (322)
T KOG1164|consen  193 QKGLFRGTLRYASINVHLGIEQGRRDDLESLFYMLLELLKGSLPWEALEMTDLKSKFEKDPRKLLTDR---FGDLKPEEF  269 (322)
T ss_pred             CccCCCCccccccHHHhCCCccCCchhhhhHHHHHHHHhcCCCCCccccccchHHHHHHHhhhhcccc---ccCCChHHH
Confidence             1224589999999999999999999999999999999999999865443322222211111111000   111222333


Q ss_pred             HHHHHHHHHhccCCCCCCCChHHHHHHhccC
Q 041793          151 IRCIHIGLLCVQQHPKDRPSMPSVILMLGSE  181 (224)
Q Consensus       151 ~~~~~li~~cl~~dp~~Rps~~~v~~~L~~~  181 (224)
                         .++...+-..+...+|....+...|...
T Consensus       270 ---~~~~~~~~~~~~~~~Pdy~~~~~~l~~~  297 (322)
T KOG1164|consen  270 ---AKILEYIDSLDYEDKPDYEKLAELLKDV  297 (322)
T ss_pred             ---HHHHHHhhccCCcCCCCHHHHHHHHHHH
Confidence               3344445558999999999999998655


No 409
>PF14531 Kinase-like:  Kinase-like; PDB: 3DZO_A 2W1Z_A 3BYV_A 3Q5Z_A 3Q60_A.
Probab=99.68  E-value=4.6e-17  Score=128.42  Aligned_cols=139  Identities=23%  Similarity=0.321  Sum_probs=93.4

Q ss_pred             CChHHHHHHHHHHHHHHhhhhcCCCCceEecCCCCCceEECCCCCceEeeecceeecCCCCCCCcccccccccccCCccc
Q 041793            7 LDWPKRFHIICGTARGVMYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDEIEGNTNRVIGTYGYMAPEY   86 (224)
Q Consensus         7 l~~~~~~~i~~qi~~~l~~Lh~~~~~~i~H~dl~~~nil~~~~~~~kl~df~~~~~~~~~~~~~~~~~~~~~~~y~aPE~   86 (224)
                      +....++.+-.|++..+++||..|   ++|+||+++|++++.+|.+.|+||+...........     ...+..|.|||.
T Consensus       142 l~~~arl~lT~Q~I~lvA~Lh~~G---lVHgdi~~~nfll~~~G~v~Lg~F~~~~r~g~~~~~-----~~~~~~~~PPe~  213 (288)
T PF14531_consen  142 LAFAARLSLTVQMIRLVANLHSYG---LVHGDIKPENFLLDQDGGVFLGDFSSLVRAGTRYRC-----SEFPVAFTPPEL  213 (288)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHTT---EEEST-SGGGEEE-TTS-EEE--GGGEEETTEEEEG-----GGS-TTTS-HHH
T ss_pred             hHHHHHHHHHHHHHHHHHHHhhcc---eEecccceeeEEEcCCCCEEEcChHHHeecCceeec-----cCCCcccCChhh
Confidence            344566777899999999999999   999999999999999999999999988765322111     233467899997


Q ss_pred             ccC--------CCcccccceEehhHHHHHHHhcccCCCCcCCCcccccccccCCCccccCccccCCcCHHHHHHHHHHHH
Q 041793           87 ASD--------GKFSVKSDVFSFGILLLEIISGKKNRGFYHSDNKLNLIGHVSMPSQLIDPCIQGSFNLVEVIRCIHIGL  158 (224)
Q Consensus        87 ~~~--------~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~  158 (224)
                      ...        ..++.+.|.|+||+++|.++++..||+..........         .+..|.    +..  ..+..||.
T Consensus       214 ~~~~~~~~~~~~~~t~~~DaW~LG~~ly~lWC~~lPf~~~~~~~~~~~---------~f~~C~----~~P--e~v~~LI~  278 (288)
T PF14531_consen  214 ESCAGQFGQNNAPYTFATDAWQLGITLYSLWCGRLPFGLSSPEADPEW---------DFSRCR----DMP--EPVQFLIR  278 (288)
T ss_dssp             HHHHTSCHHSEEEE-HHHHHHHHHHHHHHHHHSS-STCCCGGGSTSGG---------GGTTSS---------HHHHHHHH
T ss_pred             hhhhcccCcccceeeeccCHHHHHHHHHHHHHccCCCCCCCccccccc---------cchhcC----CcC--HHHHHHHH
Confidence            633        2467899999999999999999999875433322211         122222    211  24567888


Q ss_pred             HhccCCCCCC
Q 041793          159 LCVQQHPKDR  168 (224)
Q Consensus       159 ~cl~~dp~~R  168 (224)
                      .+|+.+|++|
T Consensus       279 ~lL~~~~~~R  288 (288)
T PF14531_consen  279 GLLQRNPEDR  288 (288)
T ss_dssp             HHT-SSGGGS
T ss_pred             HHccCCcccC
Confidence            9999999987


No 410
>KOG1033 consensus eIF-2alpha kinase PEK/EIF2AK3 [Translation, ribosomal structure and biogenesis]
Probab=99.65  E-value=6.3e-17  Score=133.71  Aligned_cols=151  Identities=27%  Similarity=0.412  Sum_probs=108.2

Q ss_pred             CCCChHHHHHHHHHHHHHHhhhhcCCCCceEecCCCCCceEECCCCCceEeeecceeecCCCC----CCCcccccccccc
Q 041793            5 KILDWPKRFHIICGTARGVMYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDE----IEGNTNRVIGTYG   80 (224)
Q Consensus         5 ~~l~~~~~~~i~~qi~~~l~~Lh~~~~~~i~H~dl~~~nil~~~~~~~kl~df~~~~~~~~~~----~~~~~~~~~~~~~   80 (224)
                      ...++...+.++.|++.|++|   ++   .+|+|+||.||++..+..+|++|||+........    .....+..+++..
T Consensus       354 e~~s~s~~~~~~~q~~~~~~y---k~---~ihrdlkp~nif~~~d~q~kIgDFgl~ts~~~~~~~~~~~a~~t~~~gt~~  427 (516)
T KOG1033|consen  354 EERSLSLMLDIFKQIAPAVEY---KG---LIHRDLKPSNIFFSDDDQLKIGDFGLVTSQDKDETVAPAAASHTQQVGTLL  427 (516)
T ss_pred             cccchhHHHHHHHhhccchhh---cc---chhhhccccccccccchhhhhhhhhheeecccCCcccchhhhhhhcccccc
Confidence            345677889999999999999   67   9999999999999999999999999998775543    1223344688999


Q ss_pred             cCCcccccCCCcccccceEehhHHHHHHHhc-ccCCCCcCCCcccccccccCCCccccCccccCCcCHHHHHHHHHHHHH
Q 041793           81 YMAPEYASDGKFSVKSDVFSFGILLLEIISG-KKNRGFYHSDNKLNLIGHVSMPSQLIDPCIQGSFNLVEVIRCIHIGLL  159 (224)
Q Consensus        81 y~aPE~~~~~~~~~~~Di~slG~il~~l~~g-~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~  159 (224)
                      |++||-+.+..|+.+.||||||++++|++.. ...+....   ....     .....+++.....++.     -..|+.+
T Consensus       428 YmsPEQi~g~~y~~kvdIyaLGlil~EL~~~f~T~~er~~---t~~d-----~r~g~ip~~~~~d~p~-----e~~ll~~  494 (516)
T KOG1033|consen  428 YMSPEQIRGQQYSEKVDIYALGLILAELLIQFSTQFERIA---TLTD-----IRDGIIPPEFLQDYPE-----EYTLLQQ  494 (516)
T ss_pred             cCCHHHHhhhhhhhhcchhhHHHHHHHHHHHhccHHHHHH---hhhh-----hhcCCCChHHhhcCcH-----HHHHHHH
Confidence            9999999999999999999999999999872 22221110   0001     1111111111111221     2357779


Q ss_pred             hccCCCCCCCChHHH
Q 041793          160 CVQQHPKDRPSMPSV  174 (224)
Q Consensus       160 cl~~dp~~Rps~~~v  174 (224)
                      ++...|.+||++.+.
T Consensus       495 lls~~p~~RP~~~~~  509 (516)
T KOG1033|consen  495 LLSPSPEERPSAIEV  509 (516)
T ss_pred             hcCCCcccCchHHHH
Confidence            999999999955443


No 411
>KOG1240 consensus Protein kinase containing WD40 repeats [Signal transduction mechanisms]
Probab=99.64  E-value=1.6e-16  Score=140.78  Aligned_cols=161  Identities=17%  Similarity=0.173  Sum_probs=105.7

Q ss_pred             ChHHHHHHHHHHHHHHhhhhcCCCCceEecCCCCCceEECCCCCceEeeecceeecC-CCCCCCcccccc----cccccC
Q 041793            8 DWPKRFHIICGTARGVMYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFG-GDEIEGNTNRVI----GTYGYM   82 (224)
Q Consensus         8 ~~~~~~~i~~qi~~~l~~Lh~~~~~~i~H~dl~~~nil~~~~~~~kl~df~~~~~~~-~~~~~~~~~~~~----~~~~y~   82 (224)
                      ..-++.=|+-||+.||..+|..|   |+|||||.+||++..=..+.|+||..-...- ..+.......+.    .-.+|+
T Consensus       118 ~~iEKkWiaFQLL~al~qcH~~g---VcHGDIKsENILiTSWNW~~LtDFAsFKPtYLPeDNPadf~fFFDTSrRRtCYi  194 (1431)
T KOG1240|consen  118 VLIEKKWIAFQLLKALSQCHKLG---VCHGDIKSENILITSWNWLYLTDFASFKPTYLPEDNPADFTFFFDTSRRRTCYI  194 (1431)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHcC---ccccccccceEEEeeechhhhhcccccCCccCCCCCcccceEEEecCCceeeec
Confidence            34456668899999999999999   9999999999999988889999996543221 111111111121    223799


Q ss_pred             CcccccCC----------C-cccccceEehhHHHHHHHh-cccCCCCcCCCcccccccccCCCccccCccccCCcCHHHH
Q 041793           83 APEYASDG----------K-FSVKSDVFSFGILLLEIIS-GKKNRGFYHSDNKLNLIGHVSMPSQLIDPCIQGSFNLVEV  150 (224)
Q Consensus        83 aPE~~~~~----------~-~~~~~Di~slG~il~~l~~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  150 (224)
                      |||.+...          + .+++-||||+||+++|+++ |.++|..-.      +..........+...+...    +.
T Consensus       195 APERFv~~~~~~~~~q~~~~L~paMDIFS~GCViaELf~Eg~PlF~LSQ------L~aYr~~~~~~~e~~Le~I----ed  264 (1431)
T KOG1240|consen  195 APERFVSALGKTSVGQDAPLLTPAMDIFSAGCVIAELFLEGRPLFTLSQ------LLAYRSGNADDPEQLLEKI----ED  264 (1431)
T ss_pred             ChHhhhccccccccCCcccccChhhhhhhhhHHHHHHHhcCCCcccHHH------HHhHhccCccCHHHHHHhC----cC
Confidence            99987431          1 4678999999999999986 466663211      1111110000000001111    11


Q ss_pred             HHHHHHHHHhccCCCCCCCChHHHHHHhccC
Q 041793          151 IRCIHIGLLCVQQHPKDRPSMPSVILMLGSE  181 (224)
Q Consensus       151 ~~~~~li~~cl~~dp~~Rps~~~v~~~L~~~  181 (224)
                      ..+.+|+..|++.||++|.|+++.++--.+.
T Consensus       265 ~~~Rnlil~Mi~rdPs~RlSAedyL~~yrG~  295 (1431)
T KOG1240|consen  265 VSLRNLILSMIQRDPSKRLSAEDYLQKYRGL  295 (1431)
T ss_pred             ccHHHHHHHHHccCchhccCHHHHHHhhhcc
Confidence            2467899999999999999999998875444


No 412
>KOG4158 consensus BRPK/PTEN-induced protein kinase [Signal transduction mechanisms]
Probab=99.63  E-value=1.6e-15  Score=121.97  Aligned_cols=160  Identities=23%  Similarity=0.248  Sum_probs=107.4

Q ss_pred             CCChHHHHHHHHHHHHHHhhhhcCCCCceEecCCCCCceEEC--CC--CCceEeeecceeecCCCCCCC----ccccccc
Q 041793            6 ILDWPKRFHIICGTARGVMYLHQDSRLRIIHRDLKASNVLLD--QD--MNPKISDFGLARAFGGDEIEG----NTNRVIG   77 (224)
Q Consensus         6 ~l~~~~~~~i~~qi~~~l~~Lh~~~~~~i~H~dl~~~nil~~--~~--~~~kl~df~~~~~~~~~~~~~----~~~~~~~   77 (224)
                      ..+.....-++.|+++|+.|||.+|   |.|||+|++||++.  .+  ..+.++|||++-.....+...    ..-...|
T Consensus       337 ~~s~r~~~~~laQlLEav~hL~~hg---vAhRDlKSDNiL~ElddD~~P~LVvaDFGCcLAd~~hGlqlpy~S~~Vd~GG  413 (598)
T KOG4158|consen  337 HRSYRTGRVILAQLLEAVTHLHKHG---VAHRDLKSDNILLELDDDEIPQLVVADFGCCLADDNHGLQLPYESDEVDLGG  413 (598)
T ss_pred             CCchHHHHHHHHHHHHHHHHHHHcc---chhhcccccceEEEecCCCCcEEEEcccceeeeccccccccccccccccCCC
Confidence            3455677889999999999999999   99999999999994  33  346899999986543321111    1111346


Q ss_pred             ccccCCcccccCCC-----c-ccccceEehhHHHHHHHhcccCCCCcCCCcccccccccCC-CccccCccccCCcCHHHH
Q 041793           78 TYGYMAPEYASDGK-----F-SVKSDVFSFGILLLEIISGKKNRGFYHSDNKLNLIGHVSM-PSQLIDPCIQGSFNLVEV  150 (224)
Q Consensus        78 ~~~y~aPE~~~~~~-----~-~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~  150 (224)
                      ....+|||+....+     . -.|+|.|+.|.+.||++....||.....    .......+ ..+++.  ++...++   
T Consensus       414 Na~lmAPEi~ta~PGp~avvny~kAD~WA~GalaYEIfg~~NPFY~rGe----m~L~~r~Yqe~qLPa--lp~~vpp---  484 (598)
T KOG4158|consen  414 NAKLMAPEIATAVPGPNAVVNYEKADTWAAGALAYEIFGRSNPFYKRGE----MLLDTRTYQESQLPA--LPSRVPP---  484 (598)
T ss_pred             cceecchhhhhcCCCCceeeccchhhhhhhhhhHHHHhccCCcccccch----heechhhhhhhhCCC--CcccCCh---
Confidence            66789999885432     1 3789999999999999999999855211    11111111 122211  1111111   


Q ss_pred             HHHHHHHHHhccCCCCCCCChHHHHHHh
Q 041793          151 IRCIHIGLLCVQQHPKDRPSMPSVILML  178 (224)
Q Consensus       151 ~~~~~li~~cl~~dp~~Rps~~~v~~~L  178 (224)
                       .+.+++...|+.||.+|+|..-....|
T Consensus       485 -~~rqlV~~lL~r~pskRvsp~iAANvl  511 (598)
T KOG4158|consen  485 -VARQLVFDLLKRDPSKRVSPNIAANVL  511 (598)
T ss_pred             -HHHHHHHHHhcCCccccCCccHHHhHH
Confidence             244677799999999999987666555


No 413
>KOG0195 consensus Integrin-linked kinase [Signal transduction mechanisms]
Probab=99.61  E-value=7.2e-16  Score=118.40  Aligned_cols=157  Identities=19%  Similarity=0.279  Sum_probs=114.5

Q ss_pred             CCChHHHHHHHHHHHHHHhhhhcCCCCceEecCCCCCceEECCCCCceEe--eecceeecCCCCCCCcccccccccccCC
Q 041793            6 ILDWPKRFHIICGTARGVMYLHQDSRLRIIHRDLKASNVLLDQDMNPKIS--DFGLARAFGGDEIEGNTNRVIGTYGYMA   83 (224)
Q Consensus         6 ~l~~~~~~~i~~qi~~~l~~Lh~~~~~~i~H~dl~~~nil~~~~~~~kl~--df~~~~~~~~~~~~~~~~~~~~~~~y~a   83 (224)
                      .++..+..+++.+|+.|++|||+...+ |.---|.+..+++|.+...++.  |--++..        ... ....+.|++
T Consensus       285 vvd~sqav~faldiargmaflhslep~-ipr~~lns~hvmidedltarismad~kfsfq--------e~g-r~y~pawms  354 (448)
T KOG0195|consen  285 VVDHSQAVRFALDIARGMAFLHSLEPM-IPRFYLNSKHVMIDEDLTARISMADTKFSFQ--------EVG-RAYSPAWMS  354 (448)
T ss_pred             EEecchHHHHHHHHHhhHHHHhhcchh-hhhhhcccceEEecchhhhheecccceeeee--------ccc-cccCcccCC
Confidence            346678999999999999999999733 4455788899999988776643  3222211        011 233678999


Q ss_pred             cccccCCCc---ccccceEehhHHHHHHHhcccCCCCcCCCcccccccccCCCccccCccccCCcCHHHHHHHHHHHHHh
Q 041793           84 PEYASDGKF---SVKSDVFSFGILLLEIISGKKNRGFYHSDNKLNLIGHVSMPSQLIDPCIQGSFNLVEVIRCIHIGLLC  160 (224)
Q Consensus        84 PE~~~~~~~---~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~c  160 (224)
                      ||.+...+.   -.++|+|||++++||+.+...||....+.+....+........+++     +..    ..+.+||.-|
T Consensus       355 pealqrkped~n~raadmwsfaillwel~trevpfadlspmecgmkialeglrv~ipp-----gis----~hm~klm~ic  425 (448)
T KOG0195|consen  355 PEALQRKPEDLNIRAADMWSFAILLWELNTREVPFADLSPMECGMKIALEGLRVHIPP-----GIS----RHMNKLMNIC  425 (448)
T ss_pred             HHHHhcCchhcchhhhhHHHHHHHHHHhhccccccccCCchhhhhhhhhccccccCCC-----Ccc----HHHHHHHHHH
Confidence            999876553   3789999999999999999999988777766554443333322222     211    3467888999


Q ss_pred             ccCCCCCCCChHHHHHHhccC
Q 041793          161 VQQHPKDRPSMPSVILMLGSE  181 (224)
Q Consensus       161 l~~dp~~Rps~~~v~~~L~~~  181 (224)
                      +..||.+||.+..|+-+|+..
T Consensus       426 mnedpgkrpkfdmivpilekm  446 (448)
T KOG0195|consen  426 MNEDPGKRPKFDMIVPILEKM  446 (448)
T ss_pred             hcCCCCcCCCcceehhhHHHh
Confidence            999999999999999988754


No 414
>KOG1165 consensus Casein kinase (serine/threonine/tyrosine protein kinase) [Signal transduction mechanisms]
Probab=99.61  E-value=4e-15  Score=117.05  Aligned_cols=171  Identities=15%  Similarity=0.207  Sum_probs=128.1

Q ss_pred             CCCCChHHHHHHHHHHHHHHhhhhcCCCCceEecCCCCCceEECCCC-----CceEeeecceeecCCCCCCCcc-----c
Q 041793            4 CKILDWPKRFHIICGTARGVMYLHQDSRLRIIHRDLKASNVLLDQDM-----NPKISDFGLARAFGGDEIEGNT-----N   73 (224)
Q Consensus         4 ~~~l~~~~~~~i~~qi~~~l~~Lh~~~~~~i~H~dl~~~nil~~~~~-----~~kl~df~~~~~~~~~~~~~~~-----~   73 (224)
                      ++.|+..+++.++.|++.-++|+|++.   ++.|||||+|+||...+     .+.+.|||+|..+.+..+....     .
T Consensus       118 gR~FSvKTV~miA~Qmi~rie~vH~k~---LIYRDIKPdNFLIGrp~~k~~n~IhiiDFGmAK~YrDp~TkqHIPYrE~K  194 (449)
T KOG1165|consen  118 GRRFSVKTVAMIAKQMITRIEYVHEKD---LIYRDIKPDNFLIGRPGTKDANVIHIIDFGMAKEYRDPKTKQHIPYREHK  194 (449)
T ss_pred             cCcccHHhHHHHHHHHHHHHHHHHhcc---eeecccCccceeecCCCCCCCceEEEEeccchhhhcCccccccCcccccc
Confidence            478899999999999999999999999   99999999999997544     4789999999988765543322     2


Q ss_pred             ccccccccCCcccccCCCcccccceEehhHHHHHHHhcccCCCCcCCCcccccccccCCCccccC-ccccCCcCHHHHHH
Q 041793           74 RVIGTYGYMAPEYASDGKFSVKSDVFSFGILLLEIISGKKNRGFYHSDNKLNLIGHVSMPSQLID-PCIQGSFNLVEVIR  152 (224)
Q Consensus        74 ~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~  152 (224)
                      ...||.+|++-....|...+...|+-|||.++++++-|..||++..-....+....+....+... ..+...+ ++++.+
T Consensus       195 SLsGTARYMSINTHlGrEQSRRDDLEaLGHvFmYFLRGsLPWQGLKA~tnK~kYeKIGe~Kr~T~i~~Lc~g~-P~efa~  273 (449)
T KOG1165|consen  195 SLSGTARYMSINTHLGREQSRRDDLEALGHVFMYFLRGSLPWQGLKADTNKEKYEKIGETKRSTPIEVLCEGF-PEEFAT  273 (449)
T ss_pred             ccccceeeeEeeccccchhhhhhhHHHhhhhhhhhccCCCccccccCcchHHHHHHhccccccCCHHHHHhcC-HHHHHH
Confidence            34689999999999999999999999999999999999999988776655555554443333222 1222222 233343


Q ss_pred             HHHHHHHhccCCCCCCCChHHHHHHhccC
Q 041793          153 CIHIGLLCVQQHPKDRPSMPSVILMLGSE  181 (224)
Q Consensus       153 ~~~li~~cl~~dp~~Rps~~~v~~~L~~~  181 (224)
                      .+.   ..-..+.++-|..+.+...+...
T Consensus       274 Yl~---yvR~L~F~E~PDYdylr~Lf~dv  299 (449)
T KOG1165|consen  274 YLR---YVRRLDFFETPDYDYLRKLFDDV  299 (449)
T ss_pred             HHH---HHHhcCcccCCCHHHHHHHHHHH
Confidence            333   34456788888888777765443


No 415
>COG0515 SPS1 Serine/threonine protein kinase [General function prediction only / Signal transduction mechanisms / Transcription / DNA replication, recombination, and repair]
Probab=99.58  E-value=9e-15  Score=117.44  Aligned_cols=167  Identities=29%  Similarity=0.369  Sum_probs=120.4

Q ss_pred             CCChHHHHHHHHHHHHHHhhhhcCCCCceEecCCCCCceEECCCC-CceEeeecceeecCCCCCCC----cccccccccc
Q 041793            6 ILDWPKRFHIICGTARGVMYLHQDSRLRIIHRDLKASNVLLDQDM-NPKISDFGLARAFGGDEIEG----NTNRVIGTYG   80 (224)
Q Consensus         6 ~l~~~~~~~i~~qi~~~l~~Lh~~~~~~i~H~dl~~~nil~~~~~-~~kl~df~~~~~~~~~~~~~----~~~~~~~~~~   80 (224)
                      .++......++.|++.++.|+|..+   ++|||+||+|++++..+ .+++.|||.+..........    ......++..
T Consensus        97 ~~~~~~~~~~~~~~~~~l~~~H~~~---~~hrd~kp~nil~~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~t~~  173 (384)
T COG0515          97 PLSESEALFILAQILSALEYLHSKG---IIHRDIKPENILLDRDGRVVKLIDFGLAKLLPDPGSTSSIPALPSTSVGTPG  173 (384)
T ss_pred             CCCHHHHHHHHHHHHHHHHHHHhCC---eeccCCCHHHeeecCCCCeEEEeccCcceecCCCCccccccccccccccccc
Confidence            6888999999999999999999999   99999999999999988 69999999998654332221    2345678899


Q ss_pred             cCCcccccC---CCcccccceEehhHHHHHHHhcccCCCCcCCC----cccccccccCCCccccCccccCCcCHHHHHHH
Q 041793           81 YMAPEYASD---GKFSVKSDVFSFGILLLEIISGKKNRGFYHSD----NKLNLIGHVSMPSQLIDPCIQGSFNLVEVIRC  153 (224)
Q Consensus        81 y~aPE~~~~---~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  153 (224)
                      |.+||.+.+   .......|+|++|+++++++.|..||......    .....+.....+  .................+
T Consensus       174 ~~~pe~~~~~~~~~~~~~~D~~s~g~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~  251 (384)
T COG0515         174 YMAPEVLLGLSLAYASSSSDIWSLGITLYELLTGLPPFEGEKNSSATSQTLKIILELPTP--SLASPLSPSNPELISKAA  251 (384)
T ss_pred             cCCHHHhcCCCCCCCCchHhHHHHHHHHHHHHhCCCCCCCCCccccHHHHHHHHHhcCCc--ccccccCccccchhhHHH
Confidence            999999987   56789999999999999999999996554431    111111111111  000000000001112356


Q ss_pred             HHHHHHhccCCCCCCCChHHHHHH
Q 041793          154 IHIGLLCVQQHPKDRPSMPSVILM  177 (224)
Q Consensus       154 ~~li~~cl~~dp~~Rps~~~v~~~  177 (224)
                      .+++..|+..+|..|.+..+....
T Consensus       252 ~~~~~~~~~~~~~~r~~~~~~~~~  275 (384)
T COG0515         252 SDLLKKLLAKDPKNRLSSSSDLSH  275 (384)
T ss_pred             HHHHHHHHhcCchhcCCHHHHhhc
Confidence            678889999999999998877653


No 416
>KOG0606 consensus Microtubule-associated serine/threonine kinase and related proteins [Signal transduction mechanisms; General function prediction only]
Probab=99.49  E-value=1.1e-14  Score=128.86  Aligned_cols=140  Identities=27%  Similarity=0.290  Sum_probs=99.9

Q ss_pred             HHHHHhhhhcCCCCceEecCCCCCceEECCCCCceEeeecceeecCCC--------CCC-----CcccccccccccCCcc
Q 041793           19 TARGVMYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGD--------EIE-----GNTNRVIGTYGYMAPE   85 (224)
Q Consensus        19 i~~~l~~Lh~~~~~~i~H~dl~~~nil~~~~~~~kl~df~~~~~~~~~--------~~~-----~~~~~~~~~~~y~aPE   85 (224)
                      ++.+++|||..|   |+|||+||+|.+|..-|.+|+.|||+...-...        ...     .......+++.|.|||
T Consensus       152 mvla~Eylh~yg---ivhrdlkpdnllIT~mGhiKlTDfgLsk~GLms~atnl~eg~I~k~t~Ef~dKqvcgTPeyiaPe  228 (1205)
T KOG0606|consen  152 MVLAVEYLHSYG---IVHRDLKPDNLLITSMGHIKLTDFGLSKKGLMSLATNLKEGHIEKDTHEFQDKQVCGTPEYIAPE  228 (1205)
T ss_pred             hhHHhHhhccCC---eecCCCCCCcceeeecccccccchhhhhhhhhhccchhhhcchHHHHHHhhhccccCCccccChh
Confidence            377899999999   999999999999999999999999998753211        000     0112246899999999


Q ss_pred             cccCCCcccccceEehhHHHHHHHhcccCCCCcCCCcccccccccCCCccccCccccCCcCHHHHHHHHHHHHHhccCCC
Q 041793           86 YASDGKFSVKSDVFSFGILLLEIISGKKNRGFYHSDNKLNLIGHVSMPSQLIDPCIQGSFNLVEVIRCIHIGLLCVQQHP  165 (224)
Q Consensus        86 ~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dp  165 (224)
                      ++...+|....|.|++|+|+|+++.|..||.+..++   ++...+.-.....+..  ......   ...+++.+.|+.+|
T Consensus       229 VilrqgygkpvdwwamGiIlyeFLVgcvpffGdtpe---elfg~visd~i~wpE~--dea~p~---Ea~dli~~LL~qnp  300 (1205)
T KOG0606|consen  229 VILRQGYGKPVDWWAMGIILYEFLVGCVPFFGDTPE---ELFGQVISDDIEWPEE--DEALPP---EAQDLIEQLLRQNP  300 (1205)
T ss_pred             hhhhhccCCCccHHHHHHHHHHHheeeeeccCCCHH---HHHhhhhhhhcccccc--CcCCCH---HHHHHHHHHHHhCh
Confidence            999999999999999999999999999998654333   2222211111111111  111112   34567779999999


Q ss_pred             CCCC
Q 041793          166 KDRP  169 (224)
Q Consensus       166 ~~Rp  169 (224)
                      ..|-
T Consensus       301 ~~Rl  304 (1205)
T KOG0606|consen  301 LCRL  304 (1205)
T ss_pred             Hhhc
Confidence            9995


No 417
>KOG1163 consensus Casein kinase (serine/threonine/tyrosine protein kinase) [Signal transduction mechanisms]
Probab=99.45  E-value=6.7e-14  Score=105.84  Aligned_cols=167  Identities=17%  Similarity=0.175  Sum_probs=119.2

Q ss_pred             CCCChHHHHHHHHHHHHHHhhhhcCCCCceEecCCCCCceEECCC---CCceEeeecceeecCCCCCCC-----cccccc
Q 041793            5 KILDWPKRFHIICGTARGVMYLHQDSRLRIIHRDLKASNVLLDQD---MNPKISDFGLARAFGGDEIEG-----NTNRVI   76 (224)
Q Consensus         5 ~~l~~~~~~~i~~qi~~~l~~Lh~~~~~~i~H~dl~~~nil~~~~---~~~kl~df~~~~~~~~~~~~~-----~~~~~~   76 (224)
                      +.++..+++.++.|++.-++|+|.++   ++||||||+|.+..-+   ..+.+.|||++..+.+..+..     ......
T Consensus       106 R~ftmkTvLMLaDQml~RiEyvH~r~---fiHRDIKPdNFLMGlgrh~~kl~LIDFGLaKky~d~~t~~HIpyre~r~lt  182 (341)
T KOG1163|consen  106 RRFTMKTVLMLADQMLSRIEYVHLRN---FIHRDIKPDNFLMGLGRHCNKLYLIDFGLAKKYRDIRTRQHIPYREDRNLT  182 (341)
T ss_pred             hhhhHHhHHHHHHHHHHHHHHHHhhc---cccccCCccceeeccccccceEEEEeccchhhhccccccccCccccCCccc
Confidence            56788899999999999999999999   9999999999999754   346899999999875432221     122346


Q ss_pred             cccccCCcccccCCCcccccceEehhHHHHHHHhcccCCCCcCCCcccccccccCCC-ccccCccccCCcCHHHHHHHHH
Q 041793           77 GTYGYMAPEYASDGKFSVKSDVFSFGILLLEIISGKKNRGFYHSDNKLNLIGHVSMP-SQLIDPCIQGSFNLVEVIRCIH  155 (224)
Q Consensus        77 ~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~  155 (224)
                      ||.+|.+-....+...+...|+-|+|.++.++--|..||++.......+..+.+... ...+...+..+++.+    +.-
T Consensus       183 GTaRYASinAh~g~eqSRRDDmeSvgYvLmYfnrG~LPWQglka~tk~QKyEkI~EkK~s~~ie~LC~G~P~E----F~m  258 (341)
T KOG1163|consen  183 GTARYASINAHLGIEQSRRDDMESVGYVLMYFNRGSLPWQGLKAATKKQKYEKISEKKMSTPIEVLCKGFPAE----FAM  258 (341)
T ss_pred             eeeeehhhhhhhhhhhhhhhhhhhhcceeeeeecCCCcccccchhhHHHHHHHHHHhhcCCCHHHHhCCCcHH----HHH
Confidence            889999988888888899999999999999999999999876655444333322211 111112222333332    333


Q ss_pred             HHHHhccCCCCCCCChHHHHHHh
Q 041793          156 IGLLCVQQHPKDRPSMPSVILML  178 (224)
Q Consensus       156 li~~cl~~dp~~Rps~~~v~~~L  178 (224)
                      .+..|-....++-|....+.+..
T Consensus       259 yl~Y~R~L~F~E~Pdy~ylrqlF  281 (341)
T KOG1163|consen  259 YLNYCRGLGFEEKPDYMYLRQLF  281 (341)
T ss_pred             HHHHHhhcCCCCCCcHHHHHHHH
Confidence            44577777777778776666544


No 418
>KOG0603 consensus Ribosomal protein S6 kinase [Signal transduction mechanisms]
Probab=99.45  E-value=4.1e-14  Score=119.35  Aligned_cols=147  Identities=24%  Similarity=0.292  Sum_probs=108.1

Q ss_pred             CCChHHHHHHHHHHHHHHhhhhcCCCCceEecCCCCCceEECCCCCceEeeecceeecCCCCCCCcccccccccccCCcc
Q 041793            6 ILDWPKRFHIICGTARGVMYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDEIEGNTNRVIGTYGYMAPE   85 (224)
Q Consensus         6 ~l~~~~~~~i~~qi~~~l~~Lh~~~~~~i~H~dl~~~nil~~~~~~~kl~df~~~~~~~~~~~~~~~~~~~~~~~y~aPE   85 (224)
                      .+.+.........++-+++++|+.+   ++|+|+|++||+++.+|.+++.|||+.+..-....      .-|+..|+|||
T Consensus        93 ~f~~~~~~~~~aelaLald~lh~l~---iiyrd~k~enilld~~Ghi~~tdfglske~v~~~~------~cgt~eymApE  163 (612)
T KOG0603|consen   93 MFDELDVAFYLAELALALDHLHKLG---IAYRDYKLENVLLLLEGHIKLTDFGLSKEAVKEKI------ACGTYEYRAPE  163 (612)
T ss_pred             chHHHHHHHHHHHHHHHHhhcchhH---HHHhcccccceeecccCccccCCchhhhHhHhhhh------cccchhhhhhH
Confidence            3455566677888999999999999   99999999999999999999999999876432211      15688999999


Q ss_pred             cccCCCcccccceEehhHHHHHHHhcccCCCCcCCCcccccccccCCCccccCccccCCcCHHHHHHHHHHHHHhccCCC
Q 041793           86 YASDGKFSVKSDVFSFGILLLEIISGKKNRGFYHSDNKLNLIGHVSMPSQLIDPCIQGSFNLVEVIRCIHIGLLCVQQHP  165 (224)
Q Consensus        86 ~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dp  165 (224)
                      ++.  +...+.|.|+||++.+++++|..||..       ..+..+.......        +-.-...+.+++..++..+|
T Consensus       164 I~~--gh~~a~D~ws~gvl~felltg~~pf~~-------~~~~~Il~~~~~~--------p~~l~~~a~~~~~~l~~r~p  226 (612)
T KOG0603|consen  164 IIN--GHLSAADWWSFGVLAFELLTGTLPFGG-------DTMKRILKAELEM--------PRELSAEARSLFRQLFKRNP  226 (612)
T ss_pred             hhh--ccCCcccchhhhhhHHHHhhCCCCCch-------HHHHHHhhhccCC--------chhhhHHHHHHHHHHHhhCH
Confidence            987  567899999999999999999999876       1111111111111        11112234567778999999


Q ss_pred             CCCCCh--HHHHHHh
Q 041793          166 KDRPSM--PSVILML  178 (224)
Q Consensus       166 ~~Rps~--~~v~~~L  178 (224)
                      ..|--.  ..+.+++
T Consensus       227 ~nrLg~~~~~~~eik  241 (612)
T KOG0603|consen  227 ENRLGAGPDGVDEIK  241 (612)
T ss_pred             HHHhccCcchhHHHh
Confidence            999755  4555544


No 419
>KOG0590 consensus Checkpoint kinase and related serine/threonine protein kinases [Cell cycle control, cell division, chromosome partitioning]
Probab=99.26  E-value=2.4e-12  Score=112.19  Aligned_cols=161  Identities=26%  Similarity=0.356  Sum_probs=116.5

Q ss_pred             CChHHHHHHHHHHHHHHhhhh-cCCCCceEecCCCCCceEECCCC-CceEeeecceeecCC-CCCCCccccccc-ccccC
Q 041793            7 LDWPKRFHIICGTARGVMYLH-QDSRLRIIHRDLKASNVLLDQDM-NPKISDFGLARAFGG-DEIEGNTNRVIG-TYGYM   82 (224)
Q Consensus         7 l~~~~~~~i~~qi~~~l~~Lh-~~~~~~i~H~dl~~~nil~~~~~-~~kl~df~~~~~~~~-~~~~~~~~~~~~-~~~y~   82 (224)
                      .+....-..+.|+..++.|+| ..+   +.|+|++|+|.+++.++ ..+.+|||++..+.. .+.........| ++.|.
T Consensus       120 ~~~~~~~~~~~ql~s~l~~~H~~~~---~~h~~ikP~n~~l~~s~~~l~~~df~~At~~~~~~g~~~~~~~~~g~s~~y~  196 (601)
T KOG0590|consen  120 TSSSSASRYLPQLNSGLSYLHPENG---VTHRDIKPSNSLLDESGSALKIADFGLATAYRNKNGAERSLKDRCGSSPPYG  196 (601)
T ss_pred             CCCcchhhhhhhhccCccccCcccc---cccCCCCCccchhccCCCcccCCCchhhccccccCCcceeeecccCCCCCCC
Confidence            444556678999999999999 888   99999999999999999 999999999998876 444444444566 89999


Q ss_pred             CcccccCCCc-ccccceEehhHHHHHHHhcccCCCCcCCCcccccccccCCCccccCccccCCcCHHHHHHHHHHHHHhc
Q 041793           83 APEYASDGKF-SVKSDVFSFGILLLEIISGKKNRGFYHSDNKLNLIGHVSMPSQLIDPCIQGSFNLVEVIRCIHIGLLCV  161 (224)
Q Consensus        83 aPE~~~~~~~-~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl  161 (224)
                      |||...+..+ ....|+||.|+++..+++|..|+.......... ..........-...+ ...    .....+++..++
T Consensus       197 a~E~~~~~~~~~~~~d~~S~g~~l~~~~~g~~p~~~~~~~~~~~-~~~~~~~~~~~~~~~-~~~----~~~~~~~l~k~l  270 (601)
T KOG0590|consen  197 APEHLSGKAYRGPSVDVWSLGIVLSAMLTGELPWDFPSRKDGRY-SSWKSNKGRFTQLPW-NSI----SDQAHDLLHKIL  270 (601)
T ss_pred             CcccccchhhcCCCcccccccccccccccCCCCccccccccccc-eeecccccccccCcc-ccC----Chhhhhcccccc
Confidence            9999877554 578899999999999999999987655443221 111111100000000 111    123456677889


Q ss_pred             cCCCCCCCChHHHHH
Q 041793          162 QQHPKDRPSMPSVIL  176 (224)
Q Consensus       162 ~~dp~~Rps~~~v~~  176 (224)
                      ..+|+.|.+.+++..
T Consensus       271 ~~~~~~r~s~~~~~~  285 (601)
T KOG0590|consen  271 KENPSNRLSIEELKL  285 (601)
T ss_pred             cCCchhccccccccc
Confidence            999999999988754


No 420
>KOG1166 consensus Mitotic checkpoint serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=99.25  E-value=2.4e-11  Score=109.08  Aligned_cols=109  Identities=23%  Similarity=0.204  Sum_probs=89.3

Q ss_pred             CCCCCChHHHHHHHHHHHHHHhhhhcCCCCceEecCCCCCceEEC-------CCCCceEeeecceeecCCCCCCCccccc
Q 041793            3 RCKILDWPKRFHIICGTARGVMYLHQDSRLRIIHRDLKASNVLLD-------QDMNPKISDFGLARAFGGDEIEGNTNRV   75 (224)
Q Consensus         3 ~~~~l~~~~~~~i~~qi~~~l~~Lh~~~~~~i~H~dl~~~nil~~-------~~~~~kl~df~~~~~~~~~~~~~~~~~~   75 (224)
                      ..+.++|.-+..++.|++.-++.||..+   ||||||||+|+++.       .+..++|+|||.+.-+.--.........
T Consensus       787 ~~~~m~e~lv~~~~~qml~ive~lH~~~---IIHgDiKPDNfll~~~~~~~~~~~~l~lIDfG~siDm~lfp~~~~F~~~  863 (974)
T KOG1166|consen  787 TNKVMDEYLVMFFSCQMLRIVEHLHAMG---IIHGDIKPDNFLLRREICADSDSKGLYLIDFGRSIDMKLFPDGTKFKAV  863 (974)
T ss_pred             cCCCCCchhhhHHHHHHHHHHHHHHhcc---eecccCCcceeEeecccCCCCcccceEEEecccceeeeEcCCCcEEeee
Confidence            3567889999999999999999999999   99999999999994       3445899999998754321111122234


Q ss_pred             ccccccCCcccccCCCcccccceEehhHHHHHHHhcccC
Q 041793           76 IGTYGYMAPEYASDGKFSVKSDVFSFGILLLEIISGKKN  114 (224)
Q Consensus        76 ~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p  114 (224)
                      ..+-.+-++|...|.+|+..+|.|.|+.+++.|++|++.
T Consensus       864 ~~td~f~C~EM~~grpWtYq~DyfGlAa~~h~mLFG~y~  902 (974)
T KOG1166|consen  864 WHTDLFDCIEMREGRPWTYQIDYFGLAATVHVMLFGKYM  902 (974)
T ss_pred             eccccchhHHHhcCCCCchhhhhHHHHHHHHHHHHHHHH
Confidence            556678899999999999999999999999999999875


No 421
>PRK09188 serine/threonine protein kinase; Provisional
Probab=99.24  E-value=1.2e-11  Score=101.66  Aligned_cols=74  Identities=24%  Similarity=0.278  Sum_probs=59.1

Q ss_pred             HHHHHHHHHHHhhhhcCCCCceEecCC-CCCceEECCCCCceEeeecceeecCCCCCCCc------ccccccccccCCcc
Q 041793           13 FHIICGTARGVMYLHQDSRLRIIHRDL-KASNVLLDQDMNPKISDFGLARAFGGDEIEGN------TNRVIGTYGYMAPE   85 (224)
Q Consensus        13 ~~i~~qi~~~l~~Lh~~~~~~i~H~dl-~~~nil~~~~~~~kl~df~~~~~~~~~~~~~~------~~~~~~~~~y~aPE   85 (224)
                      ..++.+++.||.|||+.|   |+|||| ||+||+++.++.++|+|||++..+........      .....++..|.+||
T Consensus       114 ~~~~~~i~~aL~~lH~~g---IiHrDL~KP~NILv~~~~~ikLiDFGlA~~~~~~~~~~~~~~~~d~~~~~~~~~~~~pe  190 (365)
T PRK09188        114 PAWFRSAHRALRDLHRAG---ITHNDLAKPQNWLMGPDGEAAVIDFQLASVFRRRGALYRIAAYEDLRHLLKHKRTYAPD  190 (365)
T ss_pred             HHHHHHHHHHHHHHHHCC---CeeCCCCCcceEEEcCCCCEEEEECccceecccCcchhhhhhhhhhhhhhccCccCCcc
Confidence            568899999999999999   999999 99999999999999999999997654321111      12345667789999


Q ss_pred             cccC
Q 041793           86 YASD   89 (224)
Q Consensus        86 ~~~~   89 (224)
                      .+..
T Consensus       191 ~~~~  194 (365)
T PRK09188        191 ALTP  194 (365)
T ss_pred             cCCh
Confidence            8853


No 422
>cd05147 RIO1_euk RIO kinase family; eukaryotic RIO1, catalytic domain. The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO1 is present in archaea, bacteria and eukaryotes. This subfamily is composed of RIO1 proteins from eukaryotes. RIO1 is essential for survival and is required for 18S rRNA processing, proper cell cycle progression and c
Probab=99.15  E-value=5.5e-11  Score=89.60  Aligned_cols=56  Identities=20%  Similarity=0.136  Sum_probs=50.9

Q ss_pred             CCCCChHHHHHHHHHHHHHHhhh-hcCCCCceEecCCCCCceEECCCCCceEeeecceeec
Q 041793            4 CKILDWPKRFHIICGTARGVMYL-HQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAF   63 (224)
Q Consensus         4 ~~~l~~~~~~~i~~qi~~~l~~L-h~~~~~~i~H~dl~~~nil~~~~~~~kl~df~~~~~~   63 (224)
                      .+.++.++.+.++.|++.+|.++ |+.|   |+||||||.||+++ ++.++|+|||++...
T Consensus       111 ~~~~~~~~~~~i~~qi~~~L~~l~H~~g---iiHrDlkP~NIli~-~~~v~LiDFG~a~~~  167 (190)
T cd05147         111 DAPLSESKARELYLQVIQIMRILYQDCR---LVHADLSEYNLLYH-DGKLYIIDVSQSVEH  167 (190)
T ss_pred             cCCCCHHHHHHHHHHHHHHHHHHHHhCC---cccCCCCHHHEEEE-CCcEEEEEccccccC
Confidence            45788999999999999999999 7999   99999999999998 578999999999754


No 423
>PRK12274 serine/threonine protein kinase; Provisional
Probab=99.15  E-value=2.7e-11  Score=91.49  Aligned_cols=100  Identities=19%  Similarity=0.206  Sum_probs=72.2

Q ss_pred             HHHHHHHHHHHhhhhcCCCCceEecCC-CCCceEECCCCCceEeeecceeecCCCCCC----C-c------ccccccccc
Q 041793           13 FHIICGTARGVMYLHQDSRLRIIHRDL-KASNVLLDQDMNPKISDFGLARAFGGDEIE----G-N------TNRVIGTYG   80 (224)
Q Consensus        13 ~~i~~qi~~~l~~Lh~~~~~~i~H~dl-~~~nil~~~~~~~kl~df~~~~~~~~~~~~----~-~------~~~~~~~~~   80 (224)
                      ..++.|++.+|.++|+.|   |+|+|| ||.||+++.++.++|+|||++.........    . .      ......++.
T Consensus        94 ~~~~~qi~~~L~~lH~~G---IvHrDL~kp~NILv~~~g~i~LIDFG~A~~~~~~~~~~r~L~~rDl~~llk~~~~y~~~  170 (218)
T PRK12274         94 LAYFRAARRLLQQLHRCG---VAHNDLAKEANWLVQEDGSPAVIDFQLAVRGNPRARWMRLLAREDLRHLLKHKRMYCPA  170 (218)
T ss_pred             HHHHHHHHHHHHHHHHCc---CccCCCCCcceEEEcCCCCEEEEECCCceecCCcchHHHHHHHHHHHHHHHHHHhcCCC
Confidence            467889999999999999   999999 799999999999999999999865432210    0 0      011123445


Q ss_pred             cCCcccccCC-Ccc-cccceEehhHHHHHHHhcccCC
Q 041793           81 YMAPEYASDG-KFS-VKSDVFSFGILLLEIISGKKNR  115 (224)
Q Consensus        81 y~aPE~~~~~-~~~-~~~Di~slG~il~~l~~g~~p~  115 (224)
                      |+.|+-..-. ..+ ...+.++.|+-+|.++|+..+.
T Consensus       171 ~l~~~~~~~l~~~~~~~~~w~~~g~~~~~~~~~~~~~  207 (218)
T PRK12274        171 ALTPVERRVLKRTSWIRELWFATGKPVYRFVTRRVLH  207 (218)
T ss_pred             CCCHHHHhhhccchhHHHHHHHhcchHHHHHhccCCc
Confidence            6666543222 223 5566778899999999998774


No 424
>cd05145 RIO1_like RIO kinase family; RIO1, RIO3 and similar proteins, catalytic domain. The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO1 is present in archaea, bacteria and eukaryotes. In addition, RIO3 is present in multicellular eukaryotes. RIO1 is essential for survival and is required for 18S rRNA processing, proper cell cycle pro
Probab=99.12  E-value=9.9e-11  Score=88.28  Aligned_cols=56  Identities=23%  Similarity=0.239  Sum_probs=51.2

Q ss_pred             CCCChHHHHHHHHHHHHHHhhhhc-CCCCceEecCCCCCceEECCCCCceEeeecceeecC
Q 041793            5 KILDWPKRFHIICGTARGVMYLHQ-DSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFG   64 (224)
Q Consensus         5 ~~l~~~~~~~i~~qi~~~l~~Lh~-~~~~~i~H~dl~~~nil~~~~~~~kl~df~~~~~~~   64 (224)
                      ..++..+...++.|++.++.++|. .|   |+|+||||.||+++ ++.++++|||++....
T Consensus       112 ~~~~~~~~~~i~~~l~~~l~~lH~~~g---ivHrDlkP~NIll~-~~~~~liDFG~a~~~~  168 (190)
T cd05145         112 VPLEEEEAEELYEQVVEQMRRLYQEAG---LVHGDLSEYNILYH-DGKPYIIDVSQAVELD  168 (190)
T ss_pred             ccCCHHHHHHHHHHHHHHHHHHHHhCC---EecCCCChhhEEEE-CCCEEEEEcccceecC
Confidence            456778999999999999999999 89   99999999999998 8899999999998654


No 425
>KOG1266 consensus Protein kinase [Signal transduction mechanisms]
Probab=99.09  E-value=2.1e-10  Score=90.78  Aligned_cols=156  Identities=19%  Similarity=0.194  Sum_probs=99.0

Q ss_pred             CCCChHHHHHHHHHHHHHHhhhhcCCCCceEecCCCCCceEECCCCCceEeeecceeecCC---CCCCCccccccccccc
Q 041793            5 KILDWPKRFHIICGTARGVMYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGG---DEIEGNTNRVIGTYGY   81 (224)
Q Consensus         5 ~~l~~~~~~~i~~qi~~~l~~Lh~~~~~~i~H~dl~~~nil~~~~~~~kl~df~~~~~~~~---~~~~~~~~~~~~~~~y   81 (224)
                      +.+....-.+++.||+.||.|||+.. ++|+|+++..+.+++..+|.+|++-- .......   ...........+.++|
T Consensus       171 ~a~~~~~wkkw~tqIlsal~yLhs~~-PpiihgnlTc~tifiq~ngLIkig~~-ap~s~h~s~~~~~~~Ek~~~~~~~g~  248 (458)
T KOG1266|consen  171 KALFQKAWKKWCTQILSALSYLHSCD-PPIIHGNLTCDTIFIQHNGLIKIGSV-APDSTHPSVNSTREAEKSVNTSLPGF  248 (458)
T ss_pred             hhhhHHHHHHHHHHHHhhhhhhhccC-CccccCCcchhheeecCCceEEeccc-CccccchhhhhhhHhhhhccccCCcc
Confidence            44566677789999999999999986 56999999999999999988886432 2211111   1111112223445678


Q ss_pred             CCcccccCCCcccccceEehhHHHHHHHhcccCCCCcCC-CcccccccccCCCccccCccccCCcCHHHHHHHHHHHHHh
Q 041793           82 MAPEYASDGKFSVKSDVFSFGILLLEIISGKKNRGFYHS-DNKLNLIGHVSMPSQLIDPCIQGSFNLVEVIRCIHIGLLC  160 (224)
Q Consensus        82 ~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~c  160 (224)
                      .+||.=.....+.+.|||+||+...+|..+..--..... ......+.......       ..+       .-..++..|
T Consensus       249 ~a~~sg~~tn~~~a~dIy~fgmcAlemailEiq~tnseS~~~~ee~ia~~i~~l-------en~-------lqr~~i~kc  314 (458)
T KOG1266|consen  249 SAPESGTTTNTTGASDIYKFGMCALEMAILEIQSTNSESKVEVEENIANVIIGL-------ENG-------LQRGSITKC  314 (458)
T ss_pred             ccCCcCcccccccchhhhhhhHHHHHHHHheeccCCCcceeehhhhhhhheeec-------cCc-------cccCcCccc
Confidence            999986666677899999999999999876532111110 01111111110000       000       012344589


Q ss_pred             ccCCCCCCCChHHHHH
Q 041793          161 VQQHPKDRPSMPSVIL  176 (224)
Q Consensus       161 l~~dp~~Rps~~~v~~  176 (224)
                      ++-+|..||++++++.
T Consensus       315 l~~eP~~rp~ar~llf  330 (458)
T KOG1266|consen  315 LEGEPNGRPDARLLLF  330 (458)
T ss_pred             ccCCCCCCcchhhhhc
Confidence            9999999999998865


No 426
>PRK10359 lipopolysaccharide core biosynthesis protein; Provisional
Probab=99.07  E-value=4.7e-11  Score=91.80  Aligned_cols=77  Identities=16%  Similarity=0.281  Sum_probs=58.5

Q ss_pred             HHHHHHHHHhhhhcCCCCceEecCCCCCceEECCCCCceEeeecceeecCCCCCCCcccccccccccCCcccccCCCccc
Q 041793           15 IICGTARGVMYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDEIEGNTNRVIGTYGYMAPEYASDGKFSV   94 (224)
Q Consensus        15 i~~qi~~~l~~Lh~~~~~~i~H~dl~~~nil~~~~~~~kl~df~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~   94 (224)
                      ...+++.+|..||+.|   ++|||++|.|++++.+| ++++|||.........   ...           .+.....+..
T Consensus       140 ~~~~i~~~l~~lH~~g---i~H~Dikp~Nili~~~g-i~liDfg~~~~~~e~~---a~d-----------~~vler~y~~  201 (232)
T PRK10359        140 VKAKIKASIESLHQHG---MVSGDPHKGNFIVSKNG-LRIIDLSGKRCTAQRK---AKD-----------RIDLERHYGI  201 (232)
T ss_pred             HHHHHHHHHHHHHHcC---CccCCCChHHEEEeCCC-EEEEECCCcccccchh---hHH-----------HHHHHhHhcc
Confidence            4669999999999999   99999999999999888 9999999776532110   000           0233344567


Q ss_pred             ccceEehhHHHHHHH
Q 041793           95 KSDVFSFGILLLEII  109 (224)
Q Consensus        95 ~~Di~slG~il~~l~  109 (224)
                      ++|+|+||+.+..+.
T Consensus       202 ~~di~~lg~~~~~~~  216 (232)
T PRK10359        202 KNEIKDLGYYLLIYK  216 (232)
T ss_pred             cccccceeEeehHHH
Confidence            899999999876553


No 427
>COG4248 Uncharacterized protein with protein kinase and helix-hairpin-helix DNA-binding domains [General function prediction only]
Probab=99.02  E-value=7.6e-09  Score=84.83  Aligned_cols=173  Identities=13%  Similarity=0.116  Sum_probs=113.9

Q ss_pred             CCCCCChHHHHHHHHHHHHHHhhhhcCCCCceEecCCCCCceEECCCCCceEeeecceeecCCCCCCCcccccccccccC
Q 041793            3 RCKILDWPKRFHIICGTARGVMYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDEIEGNTNRVIGTYGYM   82 (224)
Q Consensus         3 ~~~~l~~~~~~~i~~qi~~~l~~Lh~~~~~~i~H~dl~~~nil~~~~~~~kl~df~~~~~~~~~~~~~~~~~~~~~~~y~   82 (224)
                      +.--..|...++++..++.+...||..|   ..-||++++|+++...+.+.|.|-+.-....++   ....+.++...|+
T Consensus       110 s~P~~~w~fllrvaRnlA~aFA~lH~~G---h~vGDVn~~~~lVsd~~~V~LVdsDsfqi~~ng---~~~~cpVg~~eft  183 (637)
T COG4248         110 SYPHCAWDFLLRVARNLASAFATLHEHG---HVVGDVNQNSFLVSDDSKVVLVDSDSFQINANG---TLHLCPVGVSEFT  183 (637)
T ss_pred             cCCccccHHHHHHHHHHHHHHHHHHhcC---CcccccCccceeeecCceEEEEcccceeeccCC---ceEecccCccccC
Confidence            3445689999999999999999999999   899999999999999999999987665554332   2233457888999


Q ss_pred             Cccccc-----CCCcccccceEehhHHHHHHHhc-ccCCCCcCCCcc-----cccccccC---CCcc--ccCccccCCcC
Q 041793           83 APEYAS-----DGKFSVKSDVFSFGILLLEIISG-KKNRGFYHSDNK-----LNLIGHVS---MPSQ--LIDPCIQGSFN  146 (224)
Q Consensus        83 aPE~~~-----~~~~~~~~Di~slG~il~~l~~g-~~p~~~~~~~~~-----~~~~~~~~---~~~~--~~~~~~~~~~~  146 (224)
                      +||+-.     +..-+...|.|.||+++++++.| ..||.+......     ...+....   .++.  ...+......-
T Consensus       184 PPElQ~~~sf~g~~r~~~hD~FGLavLiF~lL~ggrHPysGI~~~~~ap~p~E~~Ia~g~f~ya~~~~~g~~p~P~~~P~  263 (637)
T COG4248         184 PPELQTLPSFVGFERTANHDNFGLAVLIFHLLFGGRHPYSGIPLISDAPNPLETDIAHGRFAYASDQRRGLKPPPRSIPL  263 (637)
T ss_pred             CHHHhccccccccCCCccccchhHHHHHHHHHhcCCCCCCcccccCCCCCcchhhhhcceeeechhccCCCCCCCCCCCh
Confidence            999754     33446778999999999999887 778865332111     10111110   0010  00111111111


Q ss_pred             HHHHHHHHHHHHHhccCC--CCCCCChHHHHHHhccC
Q 041793          147 LVEVIRCIHIGLLCVQQH--PKDRPSMPSVILMLGSE  181 (224)
Q Consensus       147 ~~~~~~~~~li~~cl~~d--p~~Rps~~~v~~~L~~~  181 (224)
                      .+-...+..|..+|+..-  +.-|||++..+..|...
T Consensus       264 ~~Lpp~vqAlF~qaF~~~~~~~~RP~a~aW~aAl~al  300 (637)
T COG4248         264 SMLPPDVQALFQQAFTESGVATPRPTAKAWVAALDAL  300 (637)
T ss_pred             hhcCHHHHHHHHHHhcccCCCCCCCCHHHHHHHHHHH
Confidence            111123445666888754  45899999988877543


No 428
>KOG2137 consensus Protein kinase [Signal transduction mechanisms]
Probab=98.84  E-value=2.7e-09  Score=91.76  Aligned_cols=157  Identities=16%  Similarity=0.223  Sum_probs=99.3

Q ss_pred             HHHHHHHHHHHHhhhhcCCCCceEecCCCCCceEECCCCCceEeeecceeecCCCCC-------CCcccccccccccCCc
Q 041793           12 RFHIICGTARGVMYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDEI-------EGNTNRVIGTYGYMAP   84 (224)
Q Consensus        12 ~~~i~~qi~~~l~~Lh~~~~~~i~H~dl~~~nil~~~~~~~kl~df~~~~~~~~~~~-------~~~~~~~~~~~~y~aP   84 (224)
                      ...=+.++++|+.|+|...+  ++|++|.|++|+++.++..|+++|+++........       ............|.+|
T Consensus       101 ~f~nl~~v~dgl~flh~sAk--~VH~ni~p~~i~~na~~~wkl~Gf~f~v~~~~~~~~p~~~yd~~lp~~~~~~~~f~ap  178 (700)
T KOG2137|consen  101 GFANLGNVADGLAFLHRSAK--VVHGNIQPEAIVVNANGDWKLAGFSFCVNANGPTEYPFSEYDPPLPLLLQPHLNFLAP  178 (700)
T ss_pred             hhhhhhcccchhhhhccCcc--eeecccchhheeeccCcceeeccchhhhccCCCCccccccCCCCCChhhccCcccccc
Confidence            33445667799999998863  99999999999999999999999998765433111       0001112234579999


Q ss_pred             ccccCCCcccccceEehhHHHHHHH-hcccCCCCcCCCcccccccccCCCccccCccccCCcCHHHHHHHHHHHHHhccC
Q 041793           85 EYASDGKFSVKSDVFSFGILLLEII-SGKKNRGFYHSDNKLNLIGHVSMPSQLIDPCIQGSFNLVEVIRCIHIGLLCVQQ  163 (224)
Q Consensus        85 E~~~~~~~~~~~Di~slG~il~~l~-~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~  163 (224)
                      |++.+...+.++|+||+|+++|.++ .|+..+...........   ..........+.....+    ..+.+=+.+++..
T Consensus       179 E~~~~~~~~~~sd~fSlG~li~~i~~~gk~i~~a~~~~~~~~~---~~~~~~~~~~~~s~~~p----~el~~~l~k~l~~  251 (700)
T KOG2137|consen  179 EYLLGTTNTPASDVFSLGVLIYTIYNGGKSIIAANGGLLSYSF---SRNLLNAGAFGYSNNLP----SELRESLKKLLNG  251 (700)
T ss_pred             hhhccccccccccceeeeeEEEEEecCCcchhhccCCcchhhh---hhcccccccccccccCc----HHHHHHHHHHhcC
Confidence            9998877789999999999999998 44444322111100000   00000000001111111    2244455689999


Q ss_pred             CCCCCCChHHHHHH
Q 041793          164 HPKDRPSMPSVILM  177 (224)
Q Consensus       164 dp~~Rps~~~v~~~  177 (224)
                      ++..||++.++...
T Consensus       252 ~~~~rp~~~~l~~~  265 (700)
T KOG2137|consen  252 DSAVRPTLDLLLSI  265 (700)
T ss_pred             CcccCcchhhhhcc
Confidence            99999988777654


No 429
>smart00090 RIO RIO-like kinase.
Probab=98.77  E-value=1.2e-08  Score=79.46  Aligned_cols=56  Identities=18%  Similarity=0.238  Sum_probs=48.7

Q ss_pred             CCChHHHHHHHHHHHHHHhhhhcCCCCceEecCCCCCceEECCCCCceEeeecceeecC
Q 041793            6 ILDWPKRFHIICGTARGVMYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFG   64 (224)
Q Consensus         6 ~l~~~~~~~i~~qi~~~l~~Lh~~~~~~i~H~dl~~~nil~~~~~~~kl~df~~~~~~~   64 (224)
                      .+...+...++.||+.+|.+||+.|  .++|+||+|.||+++ .+.++++|||.+....
T Consensus       144 ~~~~~~~~~i~~qi~~~l~~LH~~g--~iiH~Dikp~NIli~-~~~i~LiDFg~a~~~~  199 (237)
T smart00090      144 EPEEEEEFELYDDILEEMRKLYKEG--ELVHGDLSEYNILVH-DGKVVIIDVSQSVELD  199 (237)
T ss_pred             CcchHHHHHHHHHHHHHHHHHHhcC--CEEeCCCChhhEEEE-CCCEEEEEChhhhccC
Confidence            4455567899999999999999987  399999999999999 8889999999887543


No 430
>KOG0601 consensus Cyclin-dependent kinase WEE1 [Cell cycle control, cell division, chromosome partitioning]
Probab=98.71  E-value=3.5e-08  Score=83.60  Aligned_cols=158  Identities=21%  Similarity=0.299  Sum_probs=110.6

Q ss_pred             CCCChHHHHHHHHHHHH----HHhhhhcCCCCceEecCCCCCceEECCC-CCceEeeecceeecCCCCCCC---cccccc
Q 041793            5 KILDWPKRFHIICGTAR----GVMYLHQDSRLRIIHRDLKASNVLLDQD-MNPKISDFGLARAFGGDEIEG---NTNRVI   76 (224)
Q Consensus         5 ~~l~~~~~~~i~~qi~~----~l~~Lh~~~~~~i~H~dl~~~nil~~~~-~~~kl~df~~~~~~~~~~~~~---~~~~~~   76 (224)
                      ..++....+..+.+...    ||.++|..+   ++|-|+++.|++...+ ..++++|||+...........   ...+..
T Consensus       213 ~~~p~~~l~~~~~~~~~~~~~al~~~hs~~---~~~~~~kp~~i~~~~~~~s~~~~df~~v~~i~~~~~~~~~~~~~r~~  289 (524)
T KOG0601|consen  213 NFLPDNLLWNSLRDWLSRDVTALSHLHSNN---IVHDDLKPANIFTTSDWTSCKLTDFGLVSKISDGNFSSVFKVSKRPE  289 (524)
T ss_pred             ccCCchhhhhHHhhhhhcccccccccCCCc---ccccccchhheecccccceeecCCcceeEEccCCccccceeeeecCC
Confidence            34677788888888888    999999999   9999999999999998 788999999998876544222   122235


Q ss_pred             cccccCCcccccCCCcccccceEehhHHHHHHHhcccCCCCcCCCcccccccccCCCccccCccccCCcCHHHHHHHHHH
Q 041793           77 GTYGYMAPEYASDGKFSVKSDVFSFGILLLEIISGKKNRGFYHSDNKLNLIGHVSMPSQLIDPCIQGSFNLVEVIRCIHI  156 (224)
Q Consensus        77 ~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l  156 (224)
                      +...|++||.. .+-++.+.|+|++|.++.+...+............ ........+.+..+     ..+.    .+...
T Consensus       290 ~~~~Y~~ke~~-~~l~~~~~di~sl~ev~l~~~l~~~~~~~g~~~~W-~~~r~~~ip~e~~~-----~~s~----~l~~~  358 (524)
T KOG0601|consen  290 GDCIYAAKELL-NGLATFASDIFSLGEVILEAILGSHLPSVGKNSSW-SQLRQGYIPLEFCE-----GGSS----SLRSV  358 (524)
T ss_pred             CCceEeChhhh-ccccchHhhhcchhhhhHhhHhhcccccCCCCCCc-cccccccCchhhhc-----Ccch----hhhhH
Confidence            67789999987 45568999999999999998887655432211111 11111111122111     1111    22336


Q ss_pred             HHHhccCCCCCCCChHHHHH
Q 041793          157 GLLCVQQHPKDRPSMPSVIL  176 (224)
Q Consensus       157 i~~cl~~dp~~Rps~~~v~~  176 (224)
                      +..|+..+|-.|++.+.+..
T Consensus       359 ~~~~~d~~~~~~~~~q~~~~  378 (524)
T KOG0601|consen  359 TSQMLDEDPRLRLTAQILTA  378 (524)
T ss_pred             HHHhcCcchhhhhHHHHHhc
Confidence            77999999999999887765


No 431
>cd05144 RIO2_C RIO kinase family; RIO2, C-terminal catalytic domain. The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO2 is present in archaea and eukaryotes. It contains an N-terminal winged helix (wHTH) domain and a C-terminal RIO kinase catalytic domain. The wHTH domain is primarily seen in DNA-binding proteins, although some wHTH dom
Probab=98.69  E-value=2.2e-08  Score=75.93  Aligned_cols=52  Identities=21%  Similarity=0.236  Sum_probs=46.8

Q ss_pred             HHHHHHHHHHHHHHhhhhcCCCCceEecCCCCCceEECCCCCceEeeecceeecC
Q 041793           10 PKRFHIICGTARGVMYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFG   64 (224)
Q Consensus        10 ~~~~~i~~qi~~~l~~Lh~~~~~~i~H~dl~~~nil~~~~~~~kl~df~~~~~~~   64 (224)
                      .....++.+++.++.++|..|   ++|+||+|.||+++.++.++|+|||.+....
T Consensus       125 ~~~~~~~~~i~~~l~~lh~~g---i~H~Dl~p~Nill~~~~~~~liDfg~~~~~~  176 (198)
T cd05144         125 EDPEEVLDEILEEIVKAYKHG---IIHGDLSEFNILVDDDEKIYIIDWPQMVSTD  176 (198)
T ss_pred             ccHHHHHHHHHHHHHHHHHCC---CCcCCCCcccEEEcCCCcEEEEECCccccCC
Confidence            345678999999999999999   9999999999999999999999999986543


No 432
>PRK01723 3-deoxy-D-manno-octulosonic-acid kinase; Reviewed
Probab=98.67  E-value=2e-08  Score=78.46  Aligned_cols=46  Identities=26%  Similarity=0.304  Sum_probs=42.3

Q ss_pred             HHHHHHHHHhhhhcCCCCceEecCCCCCceEECCCCCceEeeecceeec
Q 041793           15 IICGTARGVMYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAF   63 (224)
Q Consensus        15 i~~qi~~~l~~Lh~~~~~~i~H~dl~~~nil~~~~~~~kl~df~~~~~~   63 (224)
                      .+.+|+.+|.+||+.|   |+|+||+|.||+++.++.++|+|||.+...
T Consensus       147 ~~~~i~~~l~~lH~~G---I~HrDlkp~NILv~~~~~v~LIDfg~~~~~  192 (239)
T PRK01723        147 QWQAIGQLIARFHDAG---VYHADLNAHNILLDPDGKFWLIDFDRGELR  192 (239)
T ss_pred             HHHHHHHHHHHHHHCC---CCCCCCCchhEEEcCCCCEEEEECCCcccC
Confidence            4678999999999999   999999999999998889999999988764


No 433
>cd05119 RIO RIO kinase family, catalytic domain. The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases present in archaea, bacteria and eukaryotes. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. RIO kinases contain a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. Most organisms contain at least two RIO kinases, RIO1 and RIO2. A third protein, RIO3, is present in multicellular eukaryotes. In yeast, RIO1 and RIO2 are essential for survival. They funct
Probab=98.60  E-value=5.1e-08  Score=73.03  Aligned_cols=51  Identities=22%  Similarity=0.182  Sum_probs=46.5

Q ss_pred             HHHHHHHHHHHHHHhhhhc-CCCCceEecCCCCCceEECCCCCceEeeecceeecC
Q 041793           10 PKRFHIICGTARGVMYLHQ-DSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFG   64 (224)
Q Consensus        10 ~~~~~i~~qi~~~l~~Lh~-~~~~~i~H~dl~~~nil~~~~~~~kl~df~~~~~~~   64 (224)
                      .+...++.+++.++.++|. .+   ++|+||+|.||+++ ++.+++.|||.+....
T Consensus       114 ~~~~~~~~~~~~~l~~lh~~~~---ivH~Dl~p~Nili~-~~~~~liDfg~a~~~~  165 (187)
T cd05119         114 EDPEELYDQILELMRKLYREAG---LVHGDLSEYNILVD-DGKVYIIDVPQAVEID  165 (187)
T ss_pred             ccHHHHHHHHHHHHHHHhhccC---cCcCCCChhhEEEE-CCcEEEEECccccccc
Confidence            5678899999999999999 88   99999999999999 8999999999997543


No 434
>PRK10345 hypothetical protein; Provisional
Probab=98.55  E-value=9.9e-08  Score=72.89  Aligned_cols=45  Identities=22%  Similarity=0.427  Sum_probs=37.1

Q ss_pred             HHHHHHHHHHH-hhhhcCCCCceEecCCCCCceEECC----CCCceEee-ecce
Q 041793           13 FHIICGTARGV-MYLHQDSRLRIIHRDLKASNVLLDQ----DMNPKISD-FGLA   60 (224)
Q Consensus        13 ~~i~~qi~~~l-~~Lh~~~~~~i~H~dl~~~nil~~~----~~~~kl~d-f~~~   60 (224)
                      ..++.+++.++ +|||+++   |+|+||||+||+++.    ++.++|+| ||..
T Consensus       107 ~~~~~~~L~~l~~yLh~~~---IvhrDlKp~NILl~~~~~~~~~~~LiDg~G~~  157 (210)
T PRK10345        107 VAQLRQLLKKLKRYLLDNR---IVTMELKPQNILCQRISESEVIPVVCDNIGES  157 (210)
T ss_pred             HHHHHHHHHHHHHHHHHCC---EeecCCCHHHEEEeccCCCCCcEEEEECCCCc
Confidence            35678888777 9999999   999999999999974    34799999 4543


No 435
>PRK14879 serine/threonine protein kinase; Provisional
Probab=98.51  E-value=1.4e-07  Score=72.13  Aligned_cols=48  Identities=35%  Similarity=0.446  Sum_probs=44.4

Q ss_pred             HHHHHHHHHHHHHhhhhcCCCCceEecCCCCCceEECCCCCceEeeecceee
Q 041793           11 KRFHIICGTARGVMYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARA   62 (224)
Q Consensus        11 ~~~~i~~qi~~~l~~Lh~~~~~~i~H~dl~~~nil~~~~~~~kl~df~~~~~   62 (224)
                      ++..++.+++.+|.++|+.+   ++|+|++|.||+++ ++.++++|||.+..
T Consensus        96 ~~~~i~~~i~~~l~~lH~~~---i~H~Dl~p~Nil~~-~~~~~liDf~~a~~  143 (211)
T PRK14879         96 EELELSREIGRLVGKLHSAG---IIHGDLTTSNMILS-GGKIYLIDFGLAEF  143 (211)
T ss_pred             HHHHHHHHHHHHHHHHHhCC---cccCCCCcccEEEE-CCCEEEEECCcccC
Confidence            56789999999999999999   99999999999999 78899999998764


No 436
>KOG0606 consensus Microtubule-associated serine/threonine kinase and related proteins [Signal transduction mechanisms; General function prediction only]
Probab=98.51  E-value=4.8e-07  Score=81.52  Aligned_cols=150  Identities=21%  Similarity=0.257  Sum_probs=103.4

Q ss_pred             HHHHHHHHHHHHhhhhcCCCCceEecCCCCCceEECCCCCceEeeecceeecCC---------------------CCC--
Q 041793           12 RFHIICGTARGVMYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGG---------------------DEI--   68 (224)
Q Consensus        12 ~~~i~~qi~~~l~~Lh~~~~~~i~H~dl~~~nil~~~~~~~kl~df~~~~~~~~---------------------~~~--   68 (224)
                      ....+..+..++++||...   +.|+|++|.|.++..+|..++.+|+.......                     ...  
T Consensus       906 aRs~i~~~vqs~e~L~s~~---r~h~~~~p~~~l~~~~gh~~l~~~~t~~~vg~~~p~~~~sg~~~~~~~~~~~~~~~~~  982 (1205)
T KOG0606|consen  906 ARSPILERVQSLESLHSSL---RKHRDLKPDSLLIAYDGHRPLTDFGTLSKVGLIPPTTDLSGPSSSGTPRRLSRSERRP  982 (1205)
T ss_pred             ccchhHHHHhhhhccccch---hhcccccccchhhcccCCcccCccccccccccccCcCCcccccccCcccccccccccc
Confidence            3345667888999999987   89999999999999999999999874332110                     000  


Q ss_pred             --C----CcccccccccccCCcccccCCCcccccceEehhHHHHHHHhcccCCCCcCCCcccccccccCCCccccCcccc
Q 041793           69 --E----GNTNRVIGTYGYMAPEYASDGKFSVKSDVFSFGILLLEIISGKKNRGFYHSDNKLNLIGHVSMPSQLIDPCIQ  142 (224)
Q Consensus        69 --~----~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~  142 (224)
                        .    .......++..|.+||.+.+......+|.|++|+++++.++|.+||...........+....  ...+.....
T Consensus       983 ~l~~~~~~~~~~~~~t~~~laPe~~lg~~hgs~ad~~~~g~~l~e~l~g~pp~na~tpq~~f~ni~~~~--~~~p~g~~~ 1060 (1205)
T KOG0606|consen  983 QLSADEARRKHAVVGTPDYLAPEILLGRRHGSAADWWSSGVCLFEVLTGIPPFNAETPQQIFENILNRD--IPWPEGPEE 1060 (1205)
T ss_pred             ccccchhhccccccCCCcccCCcccccccCCCcchhhhhhhhhhhhhcCCCCCCCcchhhhhhccccCC--CCCCCCccc
Confidence              0    11233467889999999999999999999999999999999999986544443332221111  111111111


Q ss_pred             CCcCHHHHHHHHHHHHHhccCCCCCCCChH
Q 041793          143 GSFNLVEVIRCIHIGLLCVQQHPKDRPSMP  172 (224)
Q Consensus       143 ~~~~~~~~~~~~~li~~cl~~dp~~Rps~~  172 (224)
                      .      .....+++...+..+|.+|-.+.
T Consensus      1061 ~------s~~aq~~~~~ll~~~~~qr~~a~ 1084 (1205)
T KOG0606|consen 1061 G------SYEAQDLINRLLTEEPTQRLGAK 1084 (1205)
T ss_pred             c------ChhhhhhhhhhhccCchhccCcc
Confidence            1      12234566688999999998776


No 437
>TIGR03724 arch_bud32 Kae1-associated kinase Bud32. Members of this protein family are the Bud32 protein associated with Kae1 (kinase-associated endopeptidase 1) in the Archaea. In many Archaeal genomes, Kae1 and Bud32 are fused. The complex is homologous to the Kae1 and Bud32 subunits of the eukaryotic KEOPS complex, an apparently ancient protein kinase-containing molecular machine.
Probab=98.45  E-value=2.1e-07  Score=70.41  Aligned_cols=45  Identities=33%  Similarity=0.519  Sum_probs=42.2

Q ss_pred             HHHHHHHHHHhhhhcCCCCceEecCCCCCceEECCCCCceEeeecceee
Q 041793           14 HIICGTARGVMYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARA   62 (224)
Q Consensus        14 ~i~~qi~~~l~~Lh~~~~~~i~H~dl~~~nil~~~~~~~kl~df~~~~~   62 (224)
                      .++.+++.+|.+||+.|   ++|+|++|.|++++ ++.+++.|||++..
T Consensus        94 ~~~~~i~~~l~~lH~~g---i~H~Dl~~~Nil~~-~~~~~liDfg~a~~  138 (199)
T TIGR03724        94 ELLREIGRLVGKLHKAG---IVHGDLTTSNIIVR-DDKLYLIDFGLGKY  138 (199)
T ss_pred             HHHHHHHHHHHHHHHCC---eecCCCCcceEEEE-CCcEEEEECCCCcC
Confidence            78999999999999999   99999999999999 88999999998764


No 438
>PRK09605 bifunctional UGMP family protein/serine/threonine protein kinase; Validated
Probab=98.41  E-value=2.1e-07  Score=81.08  Aligned_cols=47  Identities=30%  Similarity=0.453  Sum_probs=43.4

Q ss_pred             HHHHHHHHHHHHhhhhcCCCCceEecCCCCCceEECCCCCceEeeecceee
Q 041793           12 RFHIICGTARGVMYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARA   62 (224)
Q Consensus        12 ~~~i~~qi~~~l~~Lh~~~~~~i~H~dl~~~nil~~~~~~~kl~df~~~~~   62 (224)
                      ...++.+++.+|.+||+.+   ++|||+||.||++ .++.++++|||++..
T Consensus       430 ~~~~~~~i~~~L~~lH~~g---iiHrDlkp~NILl-~~~~~~liDFGla~~  476 (535)
T PRK09605        430 NPELVRKVGEIVAKLHKAG---IVHGDLTTSNFIV-RDDRLYLIDFGLGKY  476 (535)
T ss_pred             HHHHHHHHHHHHHHHHhCC---CccCCCChHHEEE-ECCcEEEEeCccccc
Confidence            5678999999999999999   9999999999999 678899999999865


No 439
>KOG0601 consensus Cyclin-dependent kinase WEE1 [Cell cycle control, cell division, chromosome partitioning]
Probab=98.31  E-value=9.8e-07  Score=74.98  Aligned_cols=153  Identities=22%  Similarity=0.245  Sum_probs=100.9

Q ss_pred             CCChHHHHHHHHHHHHHHhhhhcCCCCceEecCCCCCceEECCC-CCceEeeecceeecCCCCCCCccccccccccc-CC
Q 041793            6 ILDWPKRFHIICGTARGVMYLHQDSRLRIIHRDLKASNVLLDQD-MNPKISDFGLARAFGGDEIEGNTNRVIGTYGY-MA   83 (224)
Q Consensus         6 ~l~~~~~~~i~~qi~~~l~~Lh~~~~~~i~H~dl~~~nil~~~~-~~~kl~df~~~~~~~~~~~~~~~~~~~~~~~y-~a   83 (224)
                      .++...++++..|++.++.++|+..   ++|.|++|+||++..+ +..+++||+++..+....    ......+..| .+
T Consensus       362 ~~d~~~~~~~~~q~~~~l~~i~s~~---~~~~d~~psni~i~~~~~~~~~~~~~~~t~~~~~~----~~~~~~~r~~p~~  434 (524)
T KOG0601|consen  362 MLDEDPRLRLTAQILTALNVIHSKL---FVHLDVKPSNILISNDGFFSKLGDFGCWTRLAFSS----GVFHHIDRLYPIA  434 (524)
T ss_pred             hcCcchhhhhHHHHHhccccccchh---hhcccccccceeeccchhhhhccccccccccceec----ccccccccccccc
Confidence            3566788999999999999999998   9999999999999886 778999999886421110    1111222234 35


Q ss_pred             cccccCCCcccccceEehhHHHHHHHhcccCCCCcCCCcccccccccCCCccccCccccCCcCHHHHHHHHHHHHHhccC
Q 041793           84 PEYASDGKFSVKSDVFSFGILLLEIISGKKNRGFYHSDNKLNLIGHVSMPSQLIDPCIQGSFNLVEVIRCIHIGLLCVQQ  163 (224)
Q Consensus        84 PE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~  163 (224)
                      +.+.....+..++|+++||.-+.+..++..--.  .......+..     ...     .......  ..+..+.+.+...
T Consensus       435 ~~~~e~~~~~~~~~~~sl~~~~~e~~~~~~ls~--~~~~~~~i~~-----~~~-----p~~~~~~--~~~q~~~kv~~~~  500 (524)
T KOG0601|consen  435 EILLEDYPHLSKADIFSLGLSVDEAITGSPLSE--SGVQSLTIRS-----GDT-----PNLPGLK--LQLQVLLKVMINP  500 (524)
T ss_pred             hhhccccccccccccccccccccccccCcccCc--ccccceeeec-----ccc-----cCCCchH--HhhhhhhhhhcCC
Confidence            666666778899999999999999988764311  1111111110     000     0011111  2234556688899


Q ss_pred             CCCCCCChHHHHHHhc
Q 041793          164 HPKDRPSMPSVILMLG  179 (224)
Q Consensus       164 dp~~Rps~~~v~~~L~  179 (224)
                      ++..||++.++.....
T Consensus       501 ~~~~~~l~~~l~~~~~  516 (524)
T KOG0601|consen  501 DRKRRPSAVELSLHSE  516 (524)
T ss_pred             ccccchhhhhhcccch
Confidence            9999999988766543


No 440
>KOG1243 consensus Protein kinase [General function prediction only]
Probab=98.31  E-value=1.4e-06  Score=75.23  Aligned_cols=96  Identities=15%  Similarity=0.247  Sum_probs=68.8

Q ss_pred             HHHHHHHHHHHHHhhhhcCCCCceEecCCCCCceEECCCCCceEeeecceeecCCCCCCCcccccccccccCCcccccCC
Q 041793           11 KRFHIICGTARGVMYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDEIEGNTNRVIGTYGYMAPEYASDG   90 (224)
Q Consensus        11 ~~~~i~~qi~~~l~~Lh~~~~~~i~H~dl~~~nil~~~~~~~kl~df~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~   90 (224)
                      .+---+.||+.||.|||+.+  .++|++|+-..|+++..|.-||++|.++.........  ......-..|..|+.+...
T Consensus       105 ~v~~Gl~qIl~AL~FL~~d~--~lvHgNv~~~SVfVn~~GeWkLggle~v~~~~~~~~~--~~~~~~~~s~~~P~~~~~s  180 (690)
T KOG1243|consen  105 EVCLGLFQILAALSFLNDDC--NLVHGNVCKDSVFVNESGEWKLGGLELVSKASGFNAP--AKSLYLIESFDDPEEIDPS  180 (690)
T ss_pred             HHHHHHHHHHHHHHHHhccC--CeeeccEeeeeEEEcCCCcEEEeeeEEEeccccCCcc--cccchhhhcccChhhcCcc
Confidence            44456899999999998665  2999999999999999999999999988764332210  1111111235566543211


Q ss_pred             CcccccceEehhHHHHHHHhcc
Q 041793           91 KFSVKSDVFSFGILLLEIISGK  112 (224)
Q Consensus        91 ~~~~~~Di~slG~il~~l~~g~  112 (224)
                        ....|.|.|||++++++.|.
T Consensus       181 --~~s~D~~~Lg~li~el~ng~  200 (690)
T KOG1243|consen  181 --EWSIDSWGLGCLIEELFNGS  200 (690)
T ss_pred             --ccchhhhhHHHHHHHHhCcc
Confidence              24679999999999999983


No 441
>cd05146 RIO3_euk RIO kinase family; eukaryotic RIO3, catalytic domain. The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO3 is present only in multicellular eukaryotes. Its function is still unknown.
Probab=98.28  E-value=1.5e-06  Score=65.44  Aligned_cols=54  Identities=17%  Similarity=0.086  Sum_probs=45.9

Q ss_pred             CChHHHHHHHHHHHHHHhhh-hcCCCCceEecCCCCCceEECCCCCceEeeecceeecC
Q 041793            7 LDWPKRFHIICGTARGVMYL-HQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFG   64 (224)
Q Consensus         7 l~~~~~~~i~~qi~~~l~~L-h~~~~~~i~H~dl~~~nil~~~~~~~kl~df~~~~~~~   64 (224)
                      ++.++...++.+++.+|..| |+.|   ++||||++.||++. ++.+.++||+.+....
T Consensus       121 ~~~~~~~~i~~~i~~~l~~l~H~~g---lVHGDLs~~NIL~~-~~~v~iIDF~qav~~~  175 (197)
T cd05146         121 LNDEEMKNAYYQVLSMMKQLYKECN---LVHADLSEYNMLWH-DGKVWFIDVSQSVEPT  175 (197)
T ss_pred             cCHHHHHHHHHHHHHHHHHHHHhCC---eecCCCCHHHEEEE-CCcEEEEECCCceeCC
Confidence            44456678889999999998 8999   99999999999996 4679999999887643


No 442
>cd05120 APH_ChoK_like Aminoglycoside 3'-phosphotransferase (APH) and Choline Kinase (ChoK) family. The APH/ChoK family is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). The family is composed of APH, ChoK, ethanolamine kinase (ETNK), macrolide 2'-phosphotransferase (MPH2'), an unusual homoserine kinase, and uncharacterized proteins with similarity to the N-terminal domain of acyl-CoA dehydrogenase 10 (ACAD10). The members of this family catalyze the transfer of the gamma-phosphoryl group from ATP (or CTP) to small molecule substrates such as aminoglycosides, macrolides, choline, ethanolamine, and homoserine. Phosphorylation of the antibiotics, aminoglycosides and macrolides, leads to their inactivation and to bacterial antibiotic resistance. Phosphorylation of choline, ethanolamine, and homoserine serves 
Probab=98.23  E-value=2.4e-06  Score=60.97  Aligned_cols=55  Identities=27%  Similarity=0.224  Sum_probs=46.8

Q ss_pred             ChHHHHHHHHHHHHHHhhhhcCCCCceEecCCCCCceEECCCCCceEeeecceee
Q 041793            8 DWPKRFHIICGTARGVMYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARA   62 (224)
Q Consensus         8 ~~~~~~~i~~qi~~~l~~Lh~~~~~~i~H~dl~~~nil~~~~~~~kl~df~~~~~   62 (224)
                      +......++.+++.++..+|.....+++|+|+++.|++++..+.+++.||+.+..
T Consensus        84 ~~~~~~~~~~~~~~~l~~lh~~~~~~i~H~Dl~~~Nil~~~~~~~~l~Df~~~~~  138 (155)
T cd05120          84 SEEEKEDIAEQLAELLAKLHQLPLLVLCHGDLHPGNILVDDGKILGIIDWEYAGY  138 (155)
T ss_pred             CHHHHHHHHHHHHHHHHHHhCCCceEEEecCCCcceEEEECCcEEEEEecccccC
Confidence            4467788899999999999985322399999999999999888999999998864


No 443
>cd05151 ChoK Choline Kinase (ChoK). The ChoK subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). It is composed of bacterial and eukaryotic choline kinases, as well as eukaryotic ethanolamine kinase. ChoK catalyzes the transfer of the gamma-phosphoryl group from ATP (or CTP) to its substrate, choline, producing phosphorylcholine (PCho), a precursor to the biosynthesis of two major membrane phospholipids, phosphatidylcholine (PC), and sphingomyelin (SM). Although choline is the preferred substrate, ChoK also shows substantial activity towards ethanolamine and its N-methylated derivatives. Bacterial ChoK is also referred to as licA protein. ETNK catalyzes the transfer of the gamma-phosphoryl group from CTP to ethanolamine (Etn), the first step in the CDP-Etn pathway for the formation of the major ph
Probab=97.98  E-value=9e-06  Score=59.68  Aligned_cols=49  Identities=29%  Similarity=0.241  Sum_probs=40.8

Q ss_pred             HHHHHHHHHHHhhhhcCC--CCceEecCCCCCceEECCCCCceEeeecceee
Q 041793           13 FHIICGTARGVMYLHQDS--RLRIIHRDLKASNVLLDQDMNPKISDFGLARA   62 (224)
Q Consensus        13 ~~i~~qi~~~l~~Lh~~~--~~~i~H~dl~~~nil~~~~~~~kl~df~~~~~   62 (224)
                      ..++.+++.+|+.||..+  ...++|+|+++.||+++ ++.+++.||+.+..
T Consensus        86 ~~~~~~l~~~l~~LH~~~~~~~~~~HgD~~~~Nil~~-~~~~~liDf~~a~~  136 (170)
T cd05151          86 PENLEKIAKLLKKLHSSPLPDLVPCHNDLLPGNFLLD-DGRLWLIDWEYAGM  136 (170)
T ss_pred             HHHHHHHHHHHHHHhCCCCCCceeecCCCCcCcEEEE-CCeEEEEecccccC
Confidence            356789999999999987  12259999999999998 66799999998753


No 444
>PRK15123 lipopolysaccharide core heptose(I) kinase RfaP; Provisional
Probab=97.94  E-value=1.3e-05  Score=63.53  Aligned_cols=53  Identities=26%  Similarity=0.228  Sum_probs=45.8

Q ss_pred             CChHHHHHHHHHHHHHHhhhhcCCCCceEecCCCCCceEECC-------CCCceEeeecceee
Q 041793            7 LDWPKRFHIICGTARGVMYLHQDSRLRIIHRDLKASNVLLDQ-------DMNPKISDFGLARA   62 (224)
Q Consensus         7 l~~~~~~~i~~qi~~~l~~Lh~~~~~~i~H~dl~~~nil~~~-------~~~~kl~df~~~~~   62 (224)
                      .+...+..++.+++..+.-||+.|   |+|+|+++.||+++.       ++.+.++||+.+..
T Consensus       135 ~~~~~~~~ll~~la~~i~~LH~~G---i~HgDL~~~NiLl~~~~~~~~~~~~~~LIDl~r~~~  194 (268)
T PRK15123        135 PDPRLKRMLIKRVATMVRDMHAAG---INHRDCYICHFLLHLPFPGREEDLKLSVIDLHRAQI  194 (268)
T ss_pred             CCHHHHHHHHHHHHHHHHHHHHCc---CccCCCChhhEEEeccccCCCCCceEEEEECCcccc
Confidence            345567789999999999999999   999999999999975       46789999997754


No 445
>PF06293 Kdo:  Lipopolysaccharide kinase (Kdo/WaaP) family;  InterPro: IPR010440 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []:   Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins)   Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. This entry represents lipopolysaccharide kinases which are related to protein kinases IPR000719 from INTERPRO. This family includes waaP (rfaP) gene product is required for the addition of phosphate to O-4 of the first heptose residue of the lipopolysaccharide (LPS) inner core region. It has previously been shown that WaaP is necessary for resistance to hydrophobic and polycationic antimicrobials in E. coli and that it is required for virulence in invasive strains of Salmonella enterica [].; GO: 0005524 ATP binding, 0016773 phosphotransferase activity, alcohol group as acceptor, 0009103 lipopolysaccharide biosynthetic process, 0016020 membrane
Probab=97.93  E-value=1.3e-05  Score=61.15  Aligned_cols=54  Identities=33%  Similarity=0.383  Sum_probs=48.0

Q ss_pred             CChHHHHHHHHHHHHHHhhhhcCCCCceEecCCCCCceEECCCC---CceEeeecceeec
Q 041793            7 LDWPKRFHIICGTARGVMYLHQDSRLRIIHRDLKASNVLLDQDM---NPKISDFGLARAF   63 (224)
Q Consensus         7 l~~~~~~~i~~qi~~~l~~Lh~~~~~~i~H~dl~~~nil~~~~~---~~kl~df~~~~~~   63 (224)
                      ++......++.+++..++-||+.|   |+|+|+++.||+++.++   .+.+.||+.+...
T Consensus       115 ~~~~~~~~ll~~l~~~i~~lH~~g---i~H~Dl~~~NILv~~~~~~~~~~lIDld~~~~~  171 (206)
T PF06293_consen  115 LDPSQRRELLRALARLIAKLHDAG---IYHGDLNPSNILVDPDDGQYRFYLIDLDRMRFR  171 (206)
T ss_pred             cchhhHHHHHHHHHHHHHHHHHCc---CCCCCCCcccEEEeCCCCceeEEEEcchhceeC
Confidence            456678889999999999999999   99999999999999877   7899999987654


No 446
>TIGR01982 UbiB 2-polyprenylphenol 6-hydroxylase. This model represents the enzyme (UbiB) which catalyzes the first hydroxylation step in the ubiquinone biosynthetic pathway in bacteria. It is believed that the reaction is 2-polyprenylphenol - 6-hydroxy-2-polyprenylphenol. This model finds hits primarily in the proteobacteria. The gene is also known as AarF in certain species.
Probab=97.73  E-value=6e-05  Score=64.07  Aligned_cols=49  Identities=22%  Similarity=0.289  Sum_probs=42.1

Q ss_pred             HHHHHHHHH-HHhhhhcCCCCceEecCCCCCceEECCCCCceEeeecceeecC
Q 041793           13 FHIICGTAR-GVMYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFG   64 (224)
Q Consensus        13 ~~i~~qi~~-~l~~Lh~~~~~~i~H~dl~~~nil~~~~~~~kl~df~~~~~~~   64 (224)
                      ..++.+++. .+..+|..|   ++|+|++|.||+++.++.+++.|||++....
T Consensus       259 ~~ia~~~~~~~l~ql~~~g---~~H~D~hPgNilv~~~g~i~liDfG~~~~l~  308 (437)
T TIGR01982       259 KALAENLARSFLNQVLRDG---FFHADLHPGNIFVLKDGKIIALDFGIVGRLS  308 (437)
T ss_pred             HHHHHHHHHHHHHHHHhCC---ceeCCCCcccEEECCCCcEEEEeCCCeeECC
Confidence            456666666 478899999   9999999999999999999999999998764


No 447
>COG3642 Mn2+-dependent serine/threonine protein kinase [Signal transduction mechanisms]
Probab=97.72  E-value=5.6e-05  Score=55.97  Aligned_cols=46  Identities=33%  Similarity=0.437  Sum_probs=39.9

Q ss_pred             HHHHHHHHHHHhhhhcCCCCceEecCCCCCceEECCCCCceEeeecceee
Q 041793           13 FHIICGTARGVMYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARA   62 (224)
Q Consensus        13 ~~i~~qi~~~l~~Lh~~~~~~i~H~dl~~~nil~~~~~~~kl~df~~~~~   62 (224)
                      ..++..|-.-+.-||..|   |+||||.++|+++.... +.+.|||++..
T Consensus        95 ~~~~r~vG~~vg~lH~~g---ivHGDLTtsNiIl~~~~-i~~IDfGLg~~  140 (204)
T COG3642          95 PDLLREVGRLVGKLHKAG---IVHGDLTTSNIILSGGR-IYFIDFGLGEF  140 (204)
T ss_pred             hHHHHHHHHHHHHHHhcC---eecCCCccceEEEeCCc-EEEEECCcccc
Confidence            457777888889999999   99999999999997654 89999999864


No 448
>PRK09902 hypothetical protein; Provisional
Probab=97.65  E-value=7.8e-05  Score=56.67  Aligned_cols=54  Identities=11%  Similarity=0.043  Sum_probs=47.1

Q ss_pred             CCChHHHHHHHHHHHHHHhhhhcCCCCceEecCCCCCceEECCCCC--ceEeeecceee
Q 041793            6 ILDWPKRFHIICGTARGVMYLHQDSRLRIIHRDLKASNVLLDQDMN--PKISDFGLARA   62 (224)
Q Consensus         6 ~l~~~~~~~i~~qi~~~l~~Lh~~~~~~i~H~dl~~~nil~~~~~~--~kl~df~~~~~   62 (224)
                      +.+..++..++.+++..|+-||+.|   +.|+|+.+.||+++..+.  +.+.||.-++.
T Consensus       124 ~~~~~~k~~il~~va~~ia~LH~~G---v~Hgdly~khIll~~~g~~~v~lIDlEk~r~  179 (216)
T PRK09902        124 PYSDEVRQAMLKAVALAFKKMHSVN---RQHGCCYVRHIYVKTEGKAEAGFLDLEKSRR  179 (216)
T ss_pred             CcchHHHHHHHHHHHHHHHHHHHCC---CcCCCCCHhheeecCCCCeeEEEEEhhccch
Confidence            3466677899999999999999999   999999999999986677  89999976654


No 449
>PF01163 RIO1:  RIO1 family;  InterPro: IPR018934 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []:   Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins)   Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. This entry represents RIO kinase, they exhibit little sequence similarity with eukaryotic protein kinases, and are classified as atypical protein kinases []. The conformation of ATP when bound to the RIO kinases is unique when compared with ePKs, such as serine/threonine kinases or the insulin receptor tyrosine kinase, suggesting that the detailed mechanism by which the catalytic aspartate of RIO kinases participates in phosphoryl transfer may not be identical to that employed in known serine/threonine ePKs. Representatives of the RIO family are present in organisms varying from Archaea to humans, although the RIO3 proteins have only been identified in multicellular eukaryotes, to date.   Yeast Rio1 and Rio2 proteins are required for proper cell cycle progression and chromosome maintenance, and are necessary for survival of the cells. These proteins are involved in the processing of 20 S pre-rRNA via late 18 S rRNA processing. ; GO: 0003824 catalytic activity, 0005524 ATP binding; PDB: 1TQP_A 1ZAR_A 1TQI_A 1ZAO_A 1TQM_A 3RE4_A 1ZTH_B 1ZP9_A 1ZTF_A.
Probab=97.56  E-value=0.00016  Score=54.27  Aligned_cols=50  Identities=28%  Similarity=0.415  Sum_probs=38.4

Q ss_pred             HHHHHHHHHHHHHHhh-hhcCCCCceEecCCCCCceEECCCCCceEeeecceeec
Q 041793           10 PKRFHIICGTARGVMY-LHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAF   63 (224)
Q Consensus        10 ~~~~~i~~qi~~~l~~-Lh~~~~~~i~H~dl~~~nil~~~~~~~kl~df~~~~~~   63 (224)
                      +....++.+++..+.. +|..|   |+|||+++.||+++.+ .+.+.|||.+...
T Consensus       106 ~~~~~~~~~il~~~~~~~~~~g---ivHGDLs~~NIlv~~~-~~~iIDf~qav~~  156 (188)
T PF01163_consen  106 EEPKELLEEILEEIIKMLHKAG---IVHGDLSEYNILVDDG-KVYIIDFGQAVDS  156 (188)
T ss_dssp             STHHHHHHHHHHHHHHHHHCTT---EEESS-STTSEEEETT-CEEE--GTTEEET
T ss_pred             hhHHHHHHHHHHHHHHHHHhcC---ceecCCChhhEEeecc-eEEEEecCcceec
Confidence            3456778888885555 57988   9999999999999877 8999999988754


No 450
>KOG3087 consensus Serine/threonine protein kinase [General function prediction only]
Probab=97.43  E-value=0.00025  Score=52.59  Aligned_cols=47  Identities=38%  Similarity=0.555  Sum_probs=40.0

Q ss_pred             HHHHHHHHHHHhhhhcCCCCceEecCCCCCceEECCCCC---ceEeeecceee
Q 041793           13 FHIICGTARGVMYLHQDSRLRIIHRDLKASNVLLDQDMN---PKISDFGLARA   62 (224)
Q Consensus        13 ~~i~~qi~~~l~~Lh~~~~~~i~H~dl~~~nil~~~~~~---~kl~df~~~~~   62 (224)
                      ..++..|-..|.-||+++   |+||||..+||++..++.   +.+.|||+...
T Consensus       116 ~~~~~~iG~~igklH~nd---iiHGDLTTSNill~~~~~~~~~~lIdfgls~~  165 (229)
T KOG3087|consen  116 AELARRIGELIGKLHDND---IIHGDLTTSNILLRSDGNQITPILIDFGLSSV  165 (229)
T ss_pred             HHHHHHHHHHHHHhhhCC---eecccccccceEEecCCCcCceEEEeecchhc
Confidence            567888888999999999   999999999999865543   47999998754


No 451
>KOG3741 consensus Poly(A) ribonuclease subunit [RNA processing and modification]
Probab=97.27  E-value=0.00055  Score=58.23  Aligned_cols=88  Identities=18%  Similarity=0.279  Sum_probs=67.3

Q ss_pred             CCCCCChHHHHHHHHHHHHHHhhhhcCCCCceEecCCCCCceEECCCCCceEeeecceeecCCCCCCCcccccccccccC
Q 041793            3 RCKILDWPKRFHIICGTARGVMYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDEIEGNTNRVIGTYGYM   82 (224)
Q Consensus         3 ~~~~l~~~~~~~i~~qi~~~l~~Lh~~~~~~i~H~dl~~~nil~~~~~~~kl~df~~~~~~~~~~~~~~~~~~~~~~~y~   82 (224)
                      .+..++++.+|.++.|+..||.++|+.|   +.-+-|.+.+|+++.+..+++..+|..........              
T Consensus       386 ~~~~~~e~~lW~y~~QLtaaL~sIHssG---LAck~L~~~kIlv~G~~RIriS~C~i~Dvl~~d~~--------------  448 (655)
T KOG3741|consen  386 QNLKAPEEVLWSYISQLTAALYSIHSSG---LACKTLDLKKILVTGKMRIRISGCGIMDVLQEDPT--------------  448 (655)
T ss_pred             CCCCchHHHHHHHHHHHHHHHHHHHhcC---ceeecccHhHeEeeCcceEEEecccceeeecCCCC--------------
Confidence            4567889999999999999999999999   88899999999999998899988887765433220              


Q ss_pred             CcccccCCCcccccceEehhHHHHHHHhcc
Q 041793           83 APEYASDGKFSVKSDVFSFGILLLEIISGK  112 (224)
Q Consensus        83 aPE~~~~~~~~~~~Di~slG~il~~l~~g~  112 (224)
                        +.+.   .-.+-|.-.||.+++.|.+|.
T Consensus       449 --~~le---~~Qq~D~~~lG~ll~aLAt~~  473 (655)
T KOG3741|consen  449 --EPLE---SQQQNDLRDLGLLLLALATGT  473 (655)
T ss_pred             --cchh---HHhhhhHHHHHHHHHHHhhcc
Confidence              0010   013346666888888888774


No 452
>PF11883 DUF3403:  Domain of unknown function (DUF3403);  InterPro: IPR021820  This functionally uncharacterised domain of around 50 amino acids is found in the C terminus of eukaryotic S-locus receptor kinase proteins. ; GO: 0004674 protein serine/threonine kinase activity
Probab=97.04  E-value=0.00068  Score=38.63  Aligned_cols=44  Identities=52%  Similarity=0.831  Sum_probs=38.5

Q ss_pred             CCCCCCCCCCCCccCCccccCCCCCCCC--CCCcccccccccccCC
Q 041793          181 EIVLPQPKQPGYLEDRKSTRQDYSSSTP--ESCSTNTITISELEGR  224 (224)
Q Consensus       181 ~~~~~~~~~p~~~~~~~~~~~~~~~~~~--~~~s~~~~~~~~~~~~  224 (224)
                      ...++.|++|.|+..+.......+++..  .++|.|++|.+-+++|
T Consensus         3 ~~~LP~PKqPgF~~~r~~~e~~sSss~~~~~~~SvNevTiT~l~~R   48 (48)
T PF11883_consen    3 TATLPQPKQPGFFTGRSPSETDSSSSKQRDESCSVNEVTITMLEAR   48 (48)
T ss_pred             cccCCCCCCCCEEeEcCCCCcCCCcccccCCCCCeeeEEEEeEecC
Confidence            3578999999999999888877777777  8999999999999987


No 453
>PF06176 WaaY:  Lipopolysaccharide core biosynthesis protein (WaaY);  InterPro: IPR009330 This family consists of several bacterial lipopolysaccharide core biosynthesis proteins (WaaY or RfaY). The waaY, waaQ, and waaP genes are located in the central operon of the waa (formerly rfa) locus on the chromosome of Escherichia coli. This locus contains genes whose products are involved in the assembly of the core region of the lipopolysaccharide molecule. WaaY is the enzyme that phosphorylates HepII in this system [].; GO: 0009244 lipopolysaccharide core region biosynthetic process
Probab=96.90  E-value=0.0013  Score=50.44  Aligned_cols=43  Identities=21%  Similarity=0.257  Sum_probs=36.8

Q ss_pred             HHHHHHHHHhhhhcCCCCceEecCCCCCceEECCCCCceEeeeccee
Q 041793           15 IICGTARGVMYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLAR   61 (224)
Q Consensus        15 i~~qi~~~l~~Lh~~~~~~i~H~dl~~~nil~~~~~~~kl~df~~~~   61 (224)
                      +...|++++.-||+.|   ++|||+.|.|+++..++ +++.||+..+
T Consensus       140 ~~~ki~~~ikqlH~~G---~~HGD~hpgNFlv~~~~-i~iID~~~k~  182 (229)
T PF06176_consen  140 LAEKIVEAIKQLHKHG---FYHGDPHPGNFLVSNNG-IRIIDTQGKR  182 (229)
T ss_pred             HHHHHHHHHHHHHHcC---CccCCCCcCcEEEECCc-EEEEECcccc
Confidence            5567888999999999   99999999999988554 8899997554


No 454
>PF12260 PIP49_C:  Protein-kinase domain of FAM69;  InterPro: IPR022049 Family with sequence similarity 69 has three members (A, B and C). Proteins in this uncharacterised family are described as transmembrane proteins.
Probab=96.88  E-value=0.0025  Score=47.89  Aligned_cols=57  Identities=16%  Similarity=0.074  Sum_probs=49.5

Q ss_pred             CCChHHHHHHHHHHHHHHhhhhcCCCCceEecCCCCCceEECCCCCceEeeecceee
Q 041793            6 ILDWPKRFHIICGTARGVMYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARA   62 (224)
Q Consensus         6 ~l~~~~~~~i~~qi~~~l~~Lh~~~~~~i~H~dl~~~nil~~~~~~~kl~df~~~~~   62 (224)
                      .-+|..|.+|+.++++.+.+|+..-...+.-+|++++|+.++.+|.+|+.|.+.+..
T Consensus        55 ~~~w~~R~~iA~~lL~~l~~l~~~~~~~~~lcDv~~~nfgv~~~~~lk~iDld~v~~  111 (188)
T PF12260_consen   55 QSPWEQRAKIALQLLELLEELDHGPLGFFYLCDVSPDNFGVNDDGRLKLIDLDDVFV  111 (188)
T ss_pred             ccCHHHHHHHHHHHHHHHHHHhcCCCCcEEEeecchHHeEEeCCCcEEEEechhcch
Confidence            358999999999999999999885433488899999999999999999999987654


No 455
>PRK04750 ubiB putative ubiquinone biosynthesis protein UbiB; Reviewed
Probab=96.57  E-value=0.0026  Score=55.40  Aligned_cols=38  Identities=21%  Similarity=0.434  Sum_probs=32.6

Q ss_pred             hhhcCCCCceEecCCCCCceEECCCC----CceEeeecceeecCC
Q 041793           25 YLHQDSRLRIIHRDLKASNVLLDQDM----NPKISDFGLARAFGG   65 (224)
Q Consensus        25 ~Lh~~~~~~i~H~dl~~~nil~~~~~----~~kl~df~~~~~~~~   65 (224)
                      .+...|   ++|+|++|.||+++.++    .+++.|||++.....
T Consensus       275 Qif~~G---ffHaDpHPGNIlv~~~g~~~~~i~llDFGivg~l~~  316 (537)
T PRK04750        275 QVFRDG---FFHADMHPGNIFVSYDPPENPRYIALDFGIVGSLNK  316 (537)
T ss_pred             HHHhCC---eeeCCCChHHeEEecCCCCCCeEEEEecceEEECCH
Confidence            344677   99999999999999887    899999999987643


No 456
>COG0478 RIO-like serine/threonine protein kinase fused to N-terminal HTH domain [Signal transduction mechanisms]
Probab=96.57  E-value=0.0045  Score=48.80  Aligned_cols=51  Identities=22%  Similarity=0.195  Sum_probs=40.8

Q ss_pred             hHHHHHHHHHHHHHHhhhhcCCCCceEecCCCCCceEECCCCCceEeeecceee
Q 041793            9 WPKRFHIICGTARGVMYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARA   62 (224)
Q Consensus         9 ~~~~~~i~~qi~~~l~~Lh~~~~~~i~H~dl~~~nil~~~~~~~kl~df~~~~~   62 (224)
                      .+..-.++..|++-+..+...|   ++|||++.-||+++.+|.+.+.||-.+..
T Consensus       201 ~en~~~il~~il~~~~~~~~~G---iVHGDlSefNIlV~~dg~~~vIDwPQ~v~  251 (304)
T COG0478         201 VENPDEILDKILEEVRKAYRRG---IVHGDLSEFNILVTEDGDIVVIDWPQAVP  251 (304)
T ss_pred             ccCHHHHHHHHHHHHHHHHHcC---ccccCCchheEEEecCCCEEEEeCccccc
Confidence            3444556666777677777778   99999999999999999999999975543


No 457
>cd05154 ACAD10_11_like Acyl-CoA dehydrogenase (ACAD) 10 and 11, N-terminal domain, and similar proteins. This subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). This subfamily is composed of bacterial and eukaryotic proteins with similarity to the N-terminal domains of vertebrate ACAD10 and ACAD11. ACADs are a family of flavoproteins that are involved in the beta-oxidation of fatty acyl-CoA derivatives. ACAD deficiency can cause metabolic disorders including muscle fatigue, hypoglycemia, and hepatic lipidosis, among them. There are at least 11 distinct ACADs, some of which show distinct substrate specificities to either straight-chain or branched-chain fatty acids. ACAD10 is widely expressed in human tissues and is highly expressed in liver, kidney, pancreas, and spleen. ACAD10 and ACAD11 contain
Probab=96.50  E-value=0.0071  Score=46.07  Aligned_cols=30  Identities=27%  Similarity=0.408  Sum_probs=25.7

Q ss_pred             ceEecCCCCCceEECC--CCCceEeeecceee
Q 041793           33 RIIHRDLKASNVLLDQ--DMNPKISDFGLARA   62 (224)
Q Consensus        33 ~i~H~dl~~~nil~~~--~~~~kl~df~~~~~   62 (224)
                      .++|+|+.+.||+++.  ++.+.+.||+.+..
T Consensus       175 ~l~HgD~~~~Nil~~~~~~~~~~iID~e~~~~  206 (223)
T cd05154         175 GLVHGDYRLGNVLFHPDEPRVVAVLDWELATL  206 (223)
T ss_pred             EEEECCCCcccEEEcCCCCcEEEEEecccccc
Confidence            4899999999999988  56678999987753


No 458
>KOG1035 consensus eIF-2alpha kinase GCN2 [Translation, ribosomal structure and biogenesis]
Probab=96.43  E-value=0.014  Score=54.55  Aligned_cols=149  Identities=19%  Similarity=0.192  Sum_probs=92.4

Q ss_pred             CCCCChHHHHHHHHHHHHHHhhhhcCCCCceEecCCCCC---ceEECCCCCceEe--eecceeecCCCCCCCcccccccc
Q 041793            4 CKILDWPKRFHIICGTARGVMYLHQDSRLRIIHRDLKAS---NVLLDQDMNPKIS--DFGLARAFGGDEIEGNTNRVIGT   78 (224)
Q Consensus         4 ~~~l~~~~~~~i~~qi~~~l~~Lh~~~~~~i~H~dl~~~---nil~~~~~~~kl~--df~~~~~~~~~~~~~~~~~~~~~   78 (224)
                      -+.++..+.+.+..++.+||.|+|+..   ..|.-+...   +...+..+.....  ||+......+...   ......+
T Consensus       280 v~~i~~~~~r~~~~~~~~GL~~~h~~~---l~~v~L~~s~~~~~~~~~e~~~~~sl~~~~ss~~l~d~~~---~~~~~~~  353 (1351)
T KOG1035|consen  280 VGSIPLETLRILHQKLLEGLAYLHSLS---LEHVVLSASSSKESTVDGEGVVAISLSDFDSSKPLPDNEK---SFSDLLA  353 (1351)
T ss_pred             ccccCHHHHHHHHHHHhhhHHHHHHhc---cceeEEecccccccccCccceeecchhhhcccccCCCccc---chhhcCc
Confidence            356777888889999999999999986   555555444   3333444444444  7776665443221   1122334


Q ss_pred             cccCCcccccCCCcc--cccceEehhHHHHHHHhcccCCCCcCCCcccccccccCCCccccCccccCCcCHHHHHHHHHH
Q 041793           79 YGYMAPEYASDGKFS--VKSDVFSFGILLLEIISGKKNRGFYHSDNKLNLIGHVSMPSQLIDPCIQGSFNLVEVIRCIHI  156 (224)
Q Consensus        79 ~~y~aPE~~~~~~~~--~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l  156 (224)
                      ..+.++|........  ...|+|.+|.....+..|..+-....            .+..+.+    .....    ...+.
T Consensus       354 ~~~~~~e~~~~~~~~~~r~~dL~~lgll~~~~~~~~~i~~~~~------------~~~~~l~----~~~~~----~~~d~  413 (1351)
T KOG1035|consen  354 EIRNADEDLKENTAKKSRLTDLWCLGLLLLQLSQGEDISEKSA------------VPVSLLD----VLSTS----ELLDA  413 (1351)
T ss_pred             cccccccccccccchhhhhhHHHHHHHHHhhhhhcCccccccc------------chhhhhc----cccch----hhhhh
Confidence            456777777665554  44799999999999888765421110            0111111    00100    23345


Q ss_pred             HHHhccCCCCCCCChHHHHHHh
Q 041793          157 GLLCVQQHPKDRPSMPSVILML  178 (224)
Q Consensus       157 i~~cl~~dp~~Rps~~~v~~~L  178 (224)
                      ...|+..+.++|+++.+++...
T Consensus       414 ~~~~~~~~~~~Rl~~~~ll~~~  435 (1351)
T KOG1035|consen  414 LPKCLDEDSEERLSALELLTHP  435 (1351)
T ss_pred             hhhhcchhhhhccchhhhhhch
Confidence            5689999999999999998865


No 459
>COG1718 RIO1 Serine/threonine protein kinase involved in cell cycle control [Signal transduction mechanisms / Cell division and chromosome partitioning]
Probab=96.05  E-value=0.013  Score=45.65  Aligned_cols=53  Identities=21%  Similarity=0.256  Sum_probs=44.1

Q ss_pred             ChHHHHHHHHHHHHHHhhhhc-CCCCceEecCCCCCceEECCCCCceEeeecceeecC
Q 041793            8 DWPKRFHIICGTARGVMYLHQ-DSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFG   64 (224)
Q Consensus         8 ~~~~~~~i~~qi~~~l~~Lh~-~~~~~i~H~dl~~~nil~~~~~~~kl~df~~~~~~~   64 (224)
                      .......+..++++.+.-|.. .+   ++|+||+.-|||+. .+.+.++|++.+....
T Consensus       164 e~~e~~~~~~~~v~~~~~l~~~a~---LVHgDLSEyNiL~~-~~~p~iID~~QaV~~~  217 (268)
T COG1718         164 ELEEAEGLYEDVVEYMRRLYKEAG---LVHGDLSEYNILVH-DGEPYIIDVSQAVTID  217 (268)
T ss_pred             CchhHHHHHHHHHHHHHHHHHhcC---cccccchhhheEEE-CCeEEEEECccccccC
Confidence            333567788889899988888 56   99999999999999 8889999999876543


No 460
>cd05156 ChoK_euk Choline Kinase (ChoK) in eukaryotes. The ChoK subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). It is composed of bacterial and eukaryotic choline kinases, as well as eukaryotic ethanolamine kinase. ChoK catalyzes the transfer of the gamma-phosphoryl group from ATP (or CTP) to its substrate, choline, producing phosphorylcholine (PCho), a precursor to the biosynthesis of two major membrane phospholipids, phosphatidylcholine (PC) and sphingomyelin (SM). Although choline is the preferred substrate, ChoK also shows substantial activity towards ethanolamine and its N-methylated derivatives. ChoK plays an important role in cell signaling pathways and the regulation of cell growth. Along with PCho, it is involved in malignant transformation through Ras oncogenes in various human cancer
Probab=94.30  E-value=0.12  Score=41.61  Aligned_cols=29  Identities=31%  Similarity=0.406  Sum_probs=25.8

Q ss_pred             ceEecCCCCCceEECCC----CCceEeeeccee
Q 041793           33 RIIHRDLKASNVLLDQD----MNPKISDFGLAR   61 (224)
Q Consensus        33 ~i~H~dl~~~nil~~~~----~~~kl~df~~~~   61 (224)
                      .++|+|+.+.||+++.+    +.+.+.||..+.
T Consensus       180 ~lcH~Dl~~~Nil~~~~~~~~~~i~lIDwEya~  212 (302)
T cd05156         180 VFCHNDLQEGNILLLNPSSETKKLVLIDFEYAS  212 (302)
T ss_pred             eEEecCCCcCeEEecCCCCCCCcEEEEeeCCCC
Confidence            49999999999999874    789999998774


No 461
>cd05157 ETNK_euk Ethanolamine kinase (ETNK) in eukaryotes. ETNK is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). ETNK catalyzes the transfer of the gamma-phosphoryl group from CTP to ethanolamine (Etn), the first step in the CDP-Etn pathway for the formation of the major phospholipid, phosphatidylethanolamine (PtdEtn). Unlike ChoK, ETNK shows specific activity for its substrate, and displays negligible activity towards N-methylated derivatives of Etn. The Drosophila ETNK is implicated in development and neuronal function. Mammals contain two ETNK proteins, ETNK1 and ETNK2. ETNK1 selectively increases Etn uptake and phosphorylation, as well as PtdEtn synthesis. ETNK2 is found primarily in the liver and reproductive tissues. It plays a critical role in regulating placental hemostasis to support late embryo
Probab=94.18  E-value=0.097  Score=40.44  Aligned_cols=29  Identities=24%  Similarity=0.416  Sum_probs=25.5

Q ss_pred             ceEecCCCCCceEECC-CCCceEeeeccee
Q 041793           33 RIIHRDLKASNVLLDQ-DMNPKISDFGLAR   61 (224)
Q Consensus        33 ~i~H~dl~~~nil~~~-~~~~kl~df~~~~   61 (224)
                      .++|+|+.+.||+++. ++.+.+.||..+.
T Consensus       171 ~l~H~Dl~~~Nil~~~~~~~~~lIDwe~a~  200 (235)
T cd05157         171 VFCHNDLLSGNIIYNEEKNSVKFIDYEYAG  200 (235)
T ss_pred             EEEcCCCCcCcEEEeCCCCCEEEEEcccCC
Confidence            4999999999999997 5779999998774


No 462
>cd05155 APH_ChoK_like_1 Uncharacterized bacterial proteins with similarity to Aminoglycoside 3'-phosphotransferase (APH) and Choline kinase (ChoK) family members. The APH/ChoK subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). This family is composed of APH, ChoK, ethanolamine kinase (ETNK), macrolide 2'-phosphotransferase (MPH2'), an unusual homoserine kinase, and uncharacterized proteins with similarity to the N-terminal domain of acyl-CoA dehydrogenase 10 (ACAD10). The members of this family catalyze the transfer of the gamma-phosphoryl group from ATP (or CTP) to small molecule substrates, such as aminoglycosides, macrolides, choline, ethanolamine, and homoserine. Phosphorylation of the antibiotics, aminoglycosides, and macrolides leads to their inactivation and to bacterial antibiotic resista
Probab=93.85  E-value=0.089  Score=40.83  Aligned_cols=30  Identities=27%  Similarity=0.399  Sum_probs=25.2

Q ss_pred             ceEecCCCCCceEECCCCCceEeeecceee
Q 041793           33 RIIHRDLKASNVLLDQDMNPKISDFGLARA   62 (224)
Q Consensus        33 ~i~H~dl~~~nil~~~~~~~kl~df~~~~~   62 (224)
                      .++|+|+.+.|++++......+.||+.+..
T Consensus       165 ~l~HGD~~~~Nvlv~~~~i~giIDw~~a~~  194 (235)
T cd05155         165 VWFHGDLAPGNLLVQDGRLSAVIDFGCLGV  194 (235)
T ss_pred             eEEeCCCCCCcEEEECCCEEEEEeCcccCc
Confidence            499999999999998766567999997643


No 463
>PF01636 APH:  Phosphotransferase enzyme family This family is part of the larger protein kinase superfamily.;  InterPro: IPR002575 This entry consists of bacterial antibiotic resistance proteins, which confer resistance to various aminoglycosides they include:- aminoglycoside 3'-phosphotransferase or kanamycin kinase / neomycin-kanamycin phosphotransferase and streptomycin 3''-kinase or streptomycin 3''-phosphotransferase. The aminoglycoside phosphotransferases inactivate aminoglycoside antibiotics via phosphorylation []. The proteins are found in a range of taxonomic groups.; PDB: 2PPQ_A 2Q83_B 3TDV_B 3TDW_A 3I0O_A 3I0Q_A 3I1A_B 3Q2M_A 3HAV_C 2PUI_B ....
Probab=93.78  E-value=0.081  Score=40.40  Aligned_cols=30  Identities=40%  Similarity=0.469  Sum_probs=20.4

Q ss_pred             ceEecCCCCCceEEC-CCCCceEeeecceee
Q 041793           33 RIIHRDLKASNVLLD-QDMNPKISDFGLARA   62 (224)
Q Consensus        33 ~i~H~dl~~~nil~~-~~~~~kl~df~~~~~   62 (224)
                      .++|+|+.+.||+++ .++.+.+.||+.+..
T Consensus       167 ~~~HgD~~~~Nil~~~~~~~i~iID~e~a~~  197 (239)
T PF01636_consen  167 VLIHGDLHPGNILVDPSDGRIGIIDFEDAGW  197 (239)
T ss_dssp             EEE-SS-SGGGEEEESSTTEEEE--GTT-EE
T ss_pred             EEEEeccccccceeeeccceeEEEecccceE
Confidence            399999999999999 556567999987654


No 464
>PF07387 Seadorna_VP7:  Seadornavirus VP7;  InterPro: IPR009973 This family consists of several Seadornavirus specific VP7 proteins of around 305 residues in length. The function of this family is unknown.
Probab=93.57  E-value=0.075  Score=41.05  Aligned_cols=38  Identities=21%  Similarity=0.311  Sum_probs=31.7

Q ss_pred             HHHhhhhcCCCCceEecCCCCCceEECCCCCceEeeecc
Q 041793           21 RGVMYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGL   59 (224)
Q Consensus        21 ~~l~~Lh~~~~~~i~H~dl~~~nil~~~~~~~kl~df~~   59 (224)
                      .+|...|+... ..+|||..|+||+-|+.|.+|+.|-+.
T Consensus       152 ~~L~~fH~~~~-~~lHGD~np~NiM~D~~G~lKlVDP~~  189 (308)
T PF07387_consen  152 KDLMDFHSENQ-HCLHGDCNPDNIMCDKFGYLKLVDPVC  189 (308)
T ss_pred             HHHHHhhccCC-CeecCCCChhheeecCCCCEEecChhh
Confidence            56777886542 399999999999999999999999754


No 465
>COG5072 ALK1 Serine/threonine kinase of the haspin family [Cell division and chromosome partitioning]
Probab=93.57  E-value=0.15  Score=42.32  Aligned_cols=55  Identities=24%  Similarity=0.295  Sum_probs=46.4

Q ss_pred             CCCChHHHHHHHHHHHHHHhhhhcCCCCceEecCCCCCceEECCCCCceEeeecceee
Q 041793            5 KILDWPKRFHIICGTARGVMYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARA   62 (224)
Q Consensus         5 ~~l~~~~~~~i~~qi~~~l~~Lh~~~~~~i~H~dl~~~nil~~~~~~~kl~df~~~~~   62 (224)
                      +.-.+++.+.++.+-+.-+.-+..+-  ++=|||+.-.||+++ .|++.|.||.+++.
T Consensus       316 k~~~~~e~lsff~s~~sil~~lekkf--~fehrnlt~~niLId-~GnvtLIDfklsRl  370 (488)
T COG5072         316 KADRSEEELSFFWSCISILDILEKKF--PFEHRNLTLDNILID-EGNVTLIDFKLSRL  370 (488)
T ss_pred             ecccHHHHHHHHHHHHHHHhhhhhcC--Ccccccccccceeee-cCceEEEEeeeeec
Confidence            44568899999988877777776654  588999999999999 99999999999984


No 466
>TIGR00938 thrB_alt homoserine kinase, Neisseria type. Homoserine kinase is required in the biosynthesis of threonine from aspartate.The member of this family from Pseudomonas aeruginosa was shown by direct assay and complementation to act specifically as a homoserine kinase.
Probab=93.33  E-value=0.11  Score=42.03  Aligned_cols=29  Identities=41%  Similarity=0.520  Sum_probs=25.7

Q ss_pred             ceEecCCCCCceEECCCCCceEeeeccee
Q 041793           33 RIIHRDLKASNVLLDQDMNPKISDFGLAR   61 (224)
Q Consensus        33 ~i~H~dl~~~nil~~~~~~~kl~df~~~~   61 (224)
                      .++|+|+.+.|++++.++...+.||+.+.
T Consensus       188 ~l~HgD~~~~Nvl~~~~~~~~vIDfd~~~  216 (307)
T TIGR00938       188 GVIHADLFPDNVLFDGDSVKGVIDFYFAC  216 (307)
T ss_pred             ccCCCCCCcCcEEEECCceEEEeeccccc
Confidence            39999999999999988877899998764


No 467
>TIGR02906 spore_CotS spore coat protein, CotS family. Members of this family include the spore coat proteins CotS and YtaA from Bacillus subtilis and, from other endospore-forming bacteria, homologs that are more closely related to these two than to the spore coat proteins YutH and YsxE. The CotS family is more broadly distributed than YutH or YsxE, but still is not universal among spore-formers.
Probab=92.86  E-value=0.24  Score=40.04  Aligned_cols=28  Identities=25%  Similarity=0.392  Sum_probs=24.1

Q ss_pred             ceEecCCCCCceEECCCCCceEeeeccee
Q 041793           33 RIIHRDLKASNVLLDQDMNPKISDFGLAR   61 (224)
Q Consensus        33 ~i~H~dl~~~nil~~~~~~~kl~df~~~~   61 (224)
                      .++|||+.+.|++++. +.+.+.||+.+.
T Consensus       188 ~liHgD~~~~Nil~~~-~~i~lIDfd~~~  215 (313)
T TIGR02906       188 GFCHQDYAYHNILLKD-NEVYVIDFDYCT  215 (313)
T ss_pred             ceEcCCCCcccEEEeC-CcEEEEECcccc
Confidence            3999999999999987 567899998654


No 468
>PF01633 Choline_kinase:  Choline/ethanolamine kinase;  InterPro: IPR002573 Choline kinase, (ATP:choline phosphotransferase, 2.7.1.32 from EC) belongs to the choline/ethanolamine kinase family. Ethanolamine and choline are major membrane phospholipids, in the form of glycerophosphoethanolamine and glycerophosphocholine. Ethanolamine is also a component of the glycosylphosphatidylinositol (GPI) anchor, which is necessary for cell-surface protein attachment []. The de novo synthesis of these phospholipids begins with the creation of phosphoethanolamine and phosphocholine by ethanolamine and choline kinases in the first step of the CDP-ethanolamine pathway [, ]. There are two putative choline/ethanolamine kinases (C/EKs) in the Trypanosoma brucei genome.  Ethanolamine kinase has no choline kinase activity [] and its activity is inhibited by ADP []. Inositol supplementation represses ethanolamine kinase, decreasing the incorporation of ethanolamine into the CDP-ethanolamine pathway and into phosphatidylethanolamine and phosphatidylcholine []. ; GO: 0016773 phosphotransferase activity, alcohol group as acceptor; PDB: 3C5I_A 2IG7_A 3LQ3_A 3FEG_A 2QG7_E 3FI8_A 1NW1_A 3MES_A 3G15_A 2CKP_B ....
Probab=92.55  E-value=0.11  Score=39.67  Aligned_cols=30  Identities=33%  Similarity=0.516  Sum_probs=21.4

Q ss_pred             ceEecCCCCCceEE-CCCCCceEeeecceee
Q 041793           33 RIIHRDLKASNVLL-DQDMNPKISDFGLARA   62 (224)
Q Consensus        33 ~i~H~dl~~~nil~-~~~~~~kl~df~~~~~   62 (224)
                      .++|+|+.+.||++ ..++.+++.||..+..
T Consensus       144 v~cHnDl~~~Nil~~~~~~~~~lIDfEya~~  174 (211)
T PF01633_consen  144 VFCHNDLNPGNILINNKDGEVKLIDFEYAGY  174 (211)
T ss_dssp             EEE-S--SGGGEEETSSSSCEEE--GTT-EE
T ss_pred             eEeeccCccccEEeccCCCeEEEecHHHHhh
Confidence            39999999999999 8889999999988764


No 469
>cd05153 HomoserineK_II Homoserine Kinase, type II. Homoserine kinase is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). This subfamily is composed of unusual homoserine kinases, from a subset of bacteria, which have a PK fold. These proteins do not bear any similarity to the GHMP family homoserine kinases present in most bacteria and eukaryotes. Homoserine kinase catalyzes the transfer of the gamma-phosphoryl group from ATP to L-homoserine producing L-homoserine phosphate, an intermediate in the production of the amino acids threonine, methionine, and isoleucine.
Probab=92.37  E-value=0.17  Score=40.59  Aligned_cols=29  Identities=41%  Similarity=0.524  Sum_probs=25.7

Q ss_pred             eEecCCCCCceEECCCCCceEeeecceee
Q 041793           34 IIHRDLKASNVLLDQDMNPKISDFGLARA   62 (224)
Q Consensus        34 i~H~dl~~~nil~~~~~~~kl~df~~~~~   62 (224)
                      ++|+|+.+.|++++.++.+.+.||+.+..
T Consensus       177 l~HgD~~~~Nil~~~~~~~~iIDfe~a~~  205 (296)
T cd05153         177 VIHADLFRDNVLFDGDELSGVIDFYFACT  205 (296)
T ss_pred             CCccCcCcccEEEeCCceEEEeehhhhcC
Confidence            99999999999999877778999987753


No 470
>COG0510 ycfN Thiamine kinase and related kinases [Coenzyme transport and metabolism]
Probab=92.22  E-value=0.33  Score=38.65  Aligned_cols=47  Identities=23%  Similarity=0.248  Sum_probs=34.8

Q ss_pred             HHHHHHHHHhhhhcCCCCceEecCCCCCceEECCCCCceEeeecceee
Q 041793           15 IICGTARGVMYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARA   62 (224)
Q Consensus        15 i~~qi~~~l~~Lh~~~~~~i~H~dl~~~nil~~~~~~~kl~df~~~~~   62 (224)
                      .+..+-.++.-.+..- ..++|+|+.+.|++.+..+.+.|.||..+..
T Consensus       137 ~~~~l~~~l~~~~~~~-~v~cH~Dl~~~N~l~t~~~~l~LIDWEyAg~  183 (269)
T COG0510         137 KLKELRRALEEVPKDD-LVPCHNDLNPGNLLLTDKGGLFLIDWEYAGL  183 (269)
T ss_pred             HHHHHHHHhhhcCCCc-eeeecCCCCccceEEcCCCcEEEEecccCCC
Confidence            3444444555554441 1389999999999999999999999988864


No 471
>PRK05231 homoserine kinase; Provisional
Probab=92.14  E-value=0.26  Score=40.04  Aligned_cols=28  Identities=39%  Similarity=0.490  Sum_probs=24.6

Q ss_pred             eEecCCCCCceEECCCCCceEeeeccee
Q 041793           34 IIHRDLKASNVLLDQDMNPKISDFGLAR   61 (224)
Q Consensus        34 i~H~dl~~~nil~~~~~~~kl~df~~~~   61 (224)
                      ++|+|+.+.||+++.+....+.||+.+.
T Consensus       189 liHgD~~~~Nil~~~~~~~~iIDf~~~~  216 (319)
T PRK05231        189 VIHADLFRDNVLFEGDRLSGFIDFYFAC  216 (319)
T ss_pred             cCCCCCCCCcEEEECCceEEEEeccccc
Confidence            9999999999999866556899998775


No 472
>TIGR02172 Fb_sc_TIGR02172 Fibrobacter succinogenes paralogous family TIGR02172. This model describes a paralogous family of five proteins, likely to be enzymes, in the rumen bacterium Fibrobacter succinogenes S85. Members show homology to proteins described by PFAM model pfam01636, a phosphotransferase enzyme family associated with resistance to aminoglycoside antibiotics. However, members of this family score below the current trusted and noise cutoffs for pfam01636.
Probab=92.07  E-value=0.14  Score=39.65  Aligned_cols=28  Identities=18%  Similarity=0.220  Sum_probs=25.1

Q ss_pred             ceEecCCCCCceEECCCCCceEeeeccee
Q 041793           33 RIIHRDLKASNVLLDQDMNPKISDFGLAR   61 (224)
Q Consensus        33 ~i~H~dl~~~nil~~~~~~~kl~df~~~~   61 (224)
                      .++|+|+.+.|++++..+ +.+.||+.+.
T Consensus       154 ~~~HgD~~~~Nii~~~~~-~~iIDwe~a~  181 (226)
T TIGR02172       154 TCLHGDFQIGNLITSGKG-TYWIDLGDFG  181 (226)
T ss_pred             ceEecCCCCCcEEEcCCC-cEEEechhcC
Confidence            489999999999999887 9999998775


No 473
>PRK10271 thiK thiamine kinase; Provisional
Probab=91.91  E-value=0.13  Score=38.61  Aligned_cols=29  Identities=21%  Similarity=0.307  Sum_probs=25.3

Q ss_pred             ceEecCCCCCceEECCCCCceEeeecceee
Q 041793           33 RIIHRDLKASNVLLDQDMNPKISDFGLARA   62 (224)
Q Consensus        33 ~i~H~dl~~~nil~~~~~~~kl~df~~~~~   62 (224)
                      ..+|+|+.|.|+++..++ +++.||+.+..
T Consensus        78 ~p~H~D~~~~N~~~~~~~-~~lIDwe~a~~  106 (188)
T PRK10271         78 APLHMDVHAGNLVHSASG-LRLIDWEYAGD  106 (188)
T ss_pred             eeecCCCCCccEEEECCC-EEEEeCCcccC
Confidence            379999999999998777 88999998854


No 474
>PLN02236 choline kinase
Probab=91.87  E-value=0.36  Score=39.88  Aligned_cols=30  Identities=27%  Similarity=0.437  Sum_probs=25.8

Q ss_pred             ceEecCCCCCceEECC-CCCceEeeecceee
Q 041793           33 RIIHRDLKASNVLLDQ-DMNPKISDFGLARA   62 (224)
Q Consensus        33 ~i~H~dl~~~nil~~~-~~~~kl~df~~~~~   62 (224)
                      .++|+|+++.||+++. ++.+.+.||..+..
T Consensus       201 ~~cH~Dl~~~Nil~~~~~~~~~lID~Eya~~  231 (344)
T PLN02236        201 GFCHNDLQYGNIMIDEETRAITIIDYEYASY  231 (344)
T ss_pred             eEEeCCCCcCcEEEeCCCCcEEEEeehhccc
Confidence            3999999999999975 46799999988754


No 475
>cd05150 APH Aminoglycoside 3'-phosphotransferase (APH). The APH subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). APH catalyzes the transfer of the gamma-phosphoryl group from ATP to aminoglycoside antibiotics such as kanamycin, streptomycin, neomycin, and gentamicin, among others. The aminoglycoside antibiotics target the 30S ribosome and promote miscoding, leading to the production of defective proteins which insert into the bacterial membrane, resulting in membrane damage and the ultimate demise of the bacterium. Phosphorylation of the aminoglycoside antibiotics results in their inactivation, leading to bacterial antibiotic resistance. The APH gene is found on transposons and plasmids and is thought to have originated as a self-defense mechanism used by microorganisms that produce the antibio
Probab=91.82  E-value=0.22  Score=38.80  Aligned_cols=29  Identities=21%  Similarity=0.282  Sum_probs=25.7

Q ss_pred             ceEecCCCCCceEECCCCCceEeeeccee
Q 041793           33 RIIHRDLKASNVLLDQDMNPKISDFGLAR   61 (224)
Q Consensus        33 ~i~H~dl~~~nil~~~~~~~kl~df~~~~   61 (224)
                      .++|+|+.+.|++++.++...|.||+.+.
T Consensus       164 ~l~HgD~~~~Nil~~~~~~~~iIDwe~a~  192 (244)
T cd05150         164 VVTHGDACLPNIIVDPGKFSGFIDLGRLG  192 (244)
T ss_pred             EEECCCCCCccEEEeCCcEEEEEEccccc
Confidence            49999999999999987777899998764


No 476
>TIGR02721 ycfN_thiK thiamine kinase. Members of this family are the ycfN gene product of Escherichia coli, now identified as the salvage enzyme thiamine kinase (thiK), and additional proteobacterial homologs taken to be orthologs with equivalent function.
Probab=91.77  E-value=0.14  Score=40.23  Aligned_cols=29  Identities=24%  Similarity=0.337  Sum_probs=25.2

Q ss_pred             ceEecCCCCCceEECCCCCceEeeecceee
Q 041793           33 RIIHRDLKASNVLLDQDMNPKISDFGLARA   62 (224)
Q Consensus        33 ~i~H~dl~~~nil~~~~~~~kl~df~~~~~   62 (224)
                      .++|+|+.+.|++++.++ +.+.||+.+..
T Consensus       147 ~l~H~Dl~~~Nil~~~~~-~~lIDwE~a~~  175 (256)
T TIGR02721       147 APLHMDVHAYNLVVTPQG-LKLIDWEYASD  175 (256)
T ss_pred             eeecCCCCcCcEEEeCCC-CEEEeccccCc
Confidence            489999999999999877 78999987753


No 477
>PHA03111 Ser/Thr kinase; Provisional
Probab=90.63  E-value=0.37  Score=39.57  Aligned_cols=38  Identities=21%  Similarity=0.161  Sum_probs=23.7

Q ss_pred             HHHHHHHHHHHHhhhhc-CCCCceEecCCCCCceEECCC
Q 041793           12 RFHIICGTARGVMYLHQ-DSRLRIIHRDLKASNVLLDQD   49 (224)
Q Consensus        12 ~~~i~~qi~~~l~~Lh~-~~~~~i~H~dl~~~nil~~~~   49 (224)
                      +..++.||+--.-.... .+...++|-||||+|||+-.+
T Consensus       281 ikfifLQiaLLyikIYelp~c~nF~H~DLKPdNILiFds  319 (444)
T PHA03111        281 IKFIFLQIALLYIKIYELPCCDNFLHVDLKPDNILIFDS  319 (444)
T ss_pred             HHHHHHHHHHHHHhhhcCCCcceeeeccCCCCcEEEecC
Confidence            44567777554322322 223349999999999999443


No 478
>TIGR02904 spore_ysxE spore coat protein YsxE. Members of this family are homologs of the Bacillus subtilis spore coat protein CotS. Members of this family, designated YsxE, are found only in the family Bacillaceae, from among the endospore-forming members of the Firmicutes branch of the Bacteria. As a rule, the ysxE gene is found immediately downstream of spoVID, a gene necessary for spore coat assembly. The protein has been shown to be part of the spore coat.
Probab=90.53  E-value=0.44  Score=38.62  Aligned_cols=30  Identities=23%  Similarity=0.297  Sum_probs=26.9

Q ss_pred             ceEecCCCCCceEECCCCCceEeeecceee
Q 041793           33 RIIHRDLKASNVLLDQDMNPKISDFGLARA   62 (224)
Q Consensus        33 ~i~H~dl~~~nil~~~~~~~kl~df~~~~~   62 (224)
                      .++|+|+.+.|++++.++.+.+.||..+..
T Consensus       197 ~lcHgD~~~~Nvl~~~~~~~~iIDfd~~~~  226 (309)
T TIGR02904       197 VLVHGKLSLSHFLYDETRGGYFINFEKASF  226 (309)
T ss_pred             eeeCCCCcHHhEEEcCCCCEEEEEhhhccc
Confidence            399999999999999998899999987753


No 479
>KOG0576 consensus Mitogen-activated protein kinase kinase kinase kinase (MAP4K), germinal center kinase family [Signal transduction mechanisms]
Probab=90.14  E-value=0.2  Score=44.39  Aligned_cols=94  Identities=22%  Similarity=0.278  Sum_probs=68.1

Q ss_pred             HHHHHHHHHHHHHhhhhcCCCCceEecCCCCCceEECCCCCceEeeecceeecCCCCCCCcccccccccccCCcccccCC
Q 041793           11 KRFHIICGTARGVMYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDEIEGNTNRVIGTYGYMAPEYASDG   90 (224)
Q Consensus        11 ~~~~i~~qi~~~l~~Lh~~~~~~i~H~dl~~~nil~~~~~~~kl~df~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~   90 (224)
                      +...+...-..+++++|+.-   -+|+|    ||+.. ++..++++|+....+....   ......++..+++||.....
T Consensus       337 ~~~~~~r~et~~l~~l~~~~---~~~~d----~~l~s-~~~~~~~~~~v~~~L~~~~---~~~t~~~~~~~~~pev~~~~  405 (829)
T KOG0576|consen  337 QFAYPLRKETRPLAELHSSY---KVHRD----NILGS-EEEVKLLDFAVPPQLTRTM---KPRTAIGTPEPLAPEVIQEN  405 (829)
T ss_pred             hhhhhhhhhccccccccccc---ccCcc----ccccc-ccccccccccCCcccCccc---ccccCCCCCCCCCchhhccc
Confidence            33444555667899999874   47887    55543 4678999999887654332   23345678899999998888


Q ss_pred             CcccccceEehhHHHHHHHhcccCC
Q 041793           91 KFSVKSDVFSFGILLLEIISGKKNR  115 (224)
Q Consensus        91 ~~~~~~Di~slG~il~~l~~g~~p~  115 (224)
                      .+..+.|.|++|.-..++.-|-+|.
T Consensus       406 ~~~~~p~~~~~~~~~~~~ap~~pPr  430 (829)
T KOG0576|consen  406 TIDGCPDSGSLAVSAIQMAPGLPPR  430 (829)
T ss_pred             ccccCCCccCCCcchhhcCCCCCCC
Confidence            8999999999998666666666553


No 480
>PF05445 Pox_ser-thr_kin:  Poxvirus serine/threonine protein kinase;  InterPro: IPR008790 This family of proteins contain poxvirus serine/threonine protein kinases, which are essential for phosphorylation of virion proteins during virion assembly. ; GO: 0004672 protein kinase activity, 0005524 ATP binding
Probab=90.03  E-value=0.43  Score=39.34  Aligned_cols=37  Identities=22%  Similarity=0.159  Sum_probs=21.8

Q ss_pred             HHHHHHHHHHHHhhhhcC-CCCceEecCCCCCceEECC
Q 041793           12 RFHIICGTARGVMYLHQD-SRLRIIHRDLKASNVLLDQ   48 (224)
Q Consensus        12 ~~~i~~qi~~~l~~Lh~~-~~~~i~H~dl~~~nil~~~   48 (224)
                      +..+..||+--.-=.... +...++|-||||+|||+-.
T Consensus       277 vkfifLQiaLLyikIYelp~c~nF~H~DLKPdNILiFd  314 (434)
T PF05445_consen  277 VKFIFLQIALLYIKIYELPCCTNFLHVDLKPDNILIFD  314 (434)
T ss_pred             HHHHHHHHHHHHeeeecCCCcceeeecccCcCcEEEec
Confidence            344566764322112122 2234999999999999943


No 481
>smart00587 CHK ZnF_C4 abd HLH domain containing kinases domain. subfamily of choline kinases
Probab=89.95  E-value=0.29  Score=36.92  Aligned_cols=30  Identities=30%  Similarity=0.433  Sum_probs=24.6

Q ss_pred             ceEecCCCCCceEECCCC-----CceEeeecceee
Q 041793           33 RIIHRDLKASNVLLDQDM-----NPKISDFGLARA   62 (224)
Q Consensus        33 ~i~H~dl~~~nil~~~~~-----~~kl~df~~~~~   62 (224)
                      .++|||+.+.|+++..++     .+.+.||..+..
T Consensus       121 vl~HgD~~~~N~~~~~~~~~~~~~~~liDfq~~~~  155 (196)
T smart00587      121 VLNHGDLWANNIMFKYDDEGKPEDVALIDFQLSHY  155 (196)
T ss_pred             EEeeCCCCccceeeccCCCCCccceEEEecccCCc
Confidence            499999999999997543     578999987754


No 482
>COG2334 Putative homoserine kinase type II (protein kinase fold) [General function prediction only]
Probab=89.22  E-value=1.1  Score=36.87  Aligned_cols=28  Identities=46%  Similarity=0.666  Sum_probs=24.7

Q ss_pred             eEecCCCCCceEECCCCC-ceEeeeccee
Q 041793           34 IIHRDLKASNVLLDQDMN-PKISDFGLAR   61 (224)
Q Consensus        34 i~H~dl~~~nil~~~~~~-~kl~df~~~~   61 (224)
                      ++|+|+.+.||+++.... ..+.||+-+.
T Consensus       199 iIH~D~~~~NVl~d~~~~~~g~iDFdDa~  227 (331)
T COG2334         199 IIHGDLHPDNVLFDDDTDVSGFIDFDDAG  227 (331)
T ss_pred             eeecCCCccceeEcCCCCeeeEEEccccc
Confidence            899999999999998874 8899998664


No 483
>cd05152 MPH2' Macrolide 2'-Phosphotransferase (MPH2'). MPH2' is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). MPH2' catalyzes the transfer of the gamma-phosphoryl group from ATP to the 2'-hydroxyl of macrolide antibiotics such as erythromycin, clarithromycin, and azithromycin, among others. Macrolides penetrate the bacterial cell and bind to ribosomes, where it interrupts protein elongation, leading ultimately to the demise of the bacterium. Phosphorylation of macrolides leads to their inactivation. Based on substrate specificity and amino acid sequence, MPH2' is divided into types I and II, encoded by mphA and mphB genes, respectively. MPH2'I inactivates 14-membered ring macrolides while MPH2'II inactivates both 14- and 16-membered ring macrolides. Enzymatic inactivation of macrolides has been reported 
Probab=88.84  E-value=0.33  Score=38.79  Aligned_cols=30  Identities=27%  Similarity=0.560  Sum_probs=24.9

Q ss_pred             ceEecCCCCCceEECCCCC-ceEeeecceee
Q 041793           33 RIIHRDLKASNVLLDQDMN-PKISDFGLARA   62 (224)
Q Consensus        33 ~i~H~dl~~~nil~~~~~~-~kl~df~~~~~   62 (224)
                      .++|+|+.+.|++++.++. .-+.||+.+..
T Consensus       186 ~lvHGD~~~~Nilv~~~~~~~gviDWe~a~i  216 (276)
T cd05152         186 VLVHGDLHPGHILIDEDARVTGLIDWTEAKV  216 (276)
T ss_pred             eeEeCCCCCCcEEEeCCCCEEEEECcHhccc
Confidence            4999999999999987554 56999997754


No 484
>COG0661 AarF Predicted unusual protein kinase [General function prediction only]
Probab=88.25  E-value=0.96  Score=39.51  Aligned_cols=39  Identities=26%  Similarity=0.403  Sum_probs=33.1

Q ss_pred             hhhhcCCCCceEecCCCCCceEECCCCCceEeeecceeecCC
Q 041793           24 MYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGG   65 (224)
Q Consensus        24 ~~Lh~~~~~~i~H~dl~~~nil~~~~~~~kl~df~~~~~~~~   65 (224)
                      ..+-..|   ++|+|..|-|+++..+|.+.+.|||.......
T Consensus       279 ~q~~~dg---ffHaDpHpGNi~v~~~g~i~~lDfGi~g~l~~  317 (517)
T COG0661         279 RQLLRDG---FFHADPHPGNILVRSDGRIVLLDFGIVGRLDP  317 (517)
T ss_pred             HHHHhcC---ccccCCCccceEEecCCcEEEEcCcceecCCH
Confidence            3344456   99999999999999999999999999987643


No 485
>KOG2268 consensus Serine/threonine protein kinase [Signal transduction mechanisms; General function prediction only]
Probab=87.77  E-value=0.86  Score=37.53  Aligned_cols=48  Identities=17%  Similarity=0.201  Sum_probs=39.1

Q ss_pred             HHHHHHHHHHHhhhhcCCCCceEecCCCCCceEECCCCCceEeeecceeec
Q 041793           13 FHIICGTARGVMYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAF   63 (224)
Q Consensus        13 ~~i~~qi~~~l~~Lh~~~~~~i~H~dl~~~nil~~~~~~~kl~df~~~~~~   63 (224)
                      -.+...++.-|--|...|   ++|||..--||+++.++.++++||-.....
T Consensus       205 ~~ly~~lm~~Iv~la~~G---lIHgDFNEFNimv~dd~~i~vIDFPQmvS~  252 (465)
T KOG2268|consen  205 PTLYDDLMGLIVRLANHG---LIHGDFNEFNIMVKDDDKIVVIDFPQMVST  252 (465)
T ss_pred             HHHHHHHHHHHHHHHHcC---ceecccchheeEEecCCCEEEeechHhhcc
Confidence            345566666677788889   999999999999999999999999655443


No 486
>PLN02421 phosphotransferase, alcohol group as acceptor/kinase
Probab=86.56  E-value=0.61  Score=38.28  Aligned_cols=30  Identities=23%  Similarity=0.365  Sum_probs=25.6

Q ss_pred             ceEecCCCCCceEECC-CCCceEeeecceee
Q 041793           33 RIIHRDLKASNVLLDQ-DMNPKISDFGLARA   62 (224)
Q Consensus        33 ~i~H~dl~~~nil~~~-~~~~kl~df~~~~~   62 (224)
                      .++|+|+.+.||+++. ++.+++.||..+..
T Consensus       183 v~CHnDl~~~NiL~~~~~~~l~lID~EYag~  213 (330)
T PLN02421        183 VFAHNDLLSGNLMLNEDEGKLYFIDFEYGSY  213 (330)
T ss_pred             EEEECCCCcccEEEeCCCCcEEEEcccccCC
Confidence            4899999999999974 57899999988753


No 487
>COG3173 Predicted aminoglycoside phosphotransferase [General function prediction only]
Probab=86.51  E-value=0.68  Score=37.82  Aligned_cols=33  Identities=21%  Similarity=0.404  Sum_probs=28.7

Q ss_pred             CCCceEecCCCCCceEECCCCCceEeeecceee
Q 041793           30 SRLRIIHRDLKASNVLLDQDMNPKISDFGLARA   62 (224)
Q Consensus        30 ~~~~i~H~dl~~~nil~~~~~~~kl~df~~~~~   62 (224)
                      +++.++|||+.+.|++++....+-+.||+.+..
T Consensus       196 ~~~~lvHGD~~~gNlii~~~~~~gVlDwe~~~l  228 (321)
T COG3173         196 GPPVLVHGDYRPGNLIIDPGRPTGVLDWELATL  228 (321)
T ss_pred             CCceeeeCCcccCCEEEeCCCeeEEEecccccc
Confidence            345699999999999999888899999998864


No 488
>PF10140 YukC:  WXG100 protein secretion system (Wss), protein YukC;  InterPro: IPR018778  Members of this family are associated with type VII secretion of WXG100 family targets in the Firmicutes, but not in the Actinobacteria. This protein is designated YukC in Bacillus subtilis and EssB is Staphylococcus aureus. ; PDB: 4ANN_A.
Probab=85.85  E-value=0.89  Score=37.70  Aligned_cols=54  Identities=20%  Similarity=0.305  Sum_probs=34.6

Q ss_pred             CCCChHHHHHHHHHHHHHHhhhhcCCCCceEecCCCCCceEECCCCCceEeeecceeec
Q 041793            5 KILDWPKRFHIICGTARGVMYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAF   63 (224)
Q Consensus         5 ~~l~~~~~~~i~~qi~~~l~~Lh~~~~~~i~H~dl~~~nil~~~~~~~kl~df~~~~~~   63 (224)
                      +.++...+++++.+|. +|......    -+|--+.|+|++++.++.+++.-.|+...+
T Consensus        54 ~~~~~~eklr~~~ni~-~l~~~~~~----~~~f~l~P~Nl~fd~~~~p~i~hrGi~~~l  107 (359)
T PF10140_consen   54 KKLDKSEKLRLLINIA-ALKEHLNS----RYTFILHPENLVFDKNLMPKILHRGIKEIL  107 (359)
T ss_dssp             GGS-HHHHHHHHHHGG-GGGGGGGS----SEE---SGGGEEE-TTS-EEES--EETTTB
T ss_pred             HhcCHHHHHHHHHHHH-HHHHHhcC----ceeEEEechheEEcCCCCEEEEEcCCcCCC
Confidence            4567889999999954 45443222    478899999999999999999988876543


No 489
>PRK06148 hypothetical protein; Provisional
Probab=85.60  E-value=1.5  Score=41.80  Aligned_cols=29  Identities=38%  Similarity=0.528  Sum_probs=24.2

Q ss_pred             eEecCCCCCceEECCCC--Cc-eEeeecceee
Q 041793           34 IIHRDLKASNVLLDQDM--NP-KISDFGLARA   62 (224)
Q Consensus        34 i~H~dl~~~nil~~~~~--~~-kl~df~~~~~   62 (224)
                      ++|+|+.+.||+++.++  .+ -+.|||-+..
T Consensus       205 vIHgDln~~NiLv~~~~~~~isGiIDFgDa~~  236 (1013)
T PRK06148        205 VIHNDANDYNILVDADDGERISGLIDFGDAVH  236 (1013)
T ss_pred             eECCCCCcccEEEcCCCCcceEEEEECccccc
Confidence            99999999999998775  44 5999997754


No 490
>KOG1826 consensus Ras GTPase activating protein RasGAP/neurofibromin [Defense mechanisms]
Probab=85.39  E-value=0.12  Score=50.41  Aligned_cols=96  Identities=15%  Similarity=0.061  Sum_probs=69.5

Q ss_pred             HHHHhhhhcCC--CCceEecCCCCCceEECCCCCceEeeecceeecCCCCCCCcccccccccccCCcccccCCCcccccc
Q 041793           20 ARGVMYLHQDS--RLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDEIEGNTNRVIGTYGYMAPEYASDGKFSVKSD   97 (224)
Q Consensus        20 ~~~l~~Lh~~~--~~~i~H~dl~~~nil~~~~~~~kl~df~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~D   97 (224)
                      +.+..-+|...  ....+|.++++-|.++..+..++++++|+.+...+.  .......++++.|+.+++...-.++.+.|
T Consensus      1345 vl~~~~~ls~tnlg~T~v~~~Lkf~lpmIVtny~v~~gk~gLdKIknp~--~sf~Gl~l~sp~~v~qli~N~ik~t~rsd 1422 (2724)
T KOG1826|consen 1345 VLNRNVILSLTNLGNTNVSKSLKFTLPMIVTNYNVKLGKGGLDKIKNPV--LSFFGLELCSPIYVLQLIKNEIKFTKRSD 1422 (2724)
T ss_pred             HhccchhhhcccCCccchhhhhhhhccceecCCcccccccccccccCch--HhhhhhhhCCHHHHHHHHHHHHhhhhHHH
Confidence            55555555442  123689999999999999999999999999832211  11123346677788888877777888899


Q ss_pred             eEehhHHHHHHHhcccCCCC
Q 041793           98 VFSFGILLLEIISGKKNRGF  117 (224)
Q Consensus        98 i~slG~il~~l~~g~~p~~~  117 (224)
                      +|..|+.+|..-.|..+|-.
T Consensus      1423 ilr~s~~ly~rs~~n~~fi~ 1442 (2724)
T KOG1826|consen 1423 ILRRSLSLYLRSDGNAYFIF 1442 (2724)
T ss_pred             HHHHHHHHHHHhcccHHHHH
Confidence            99999999988887766543


No 491
>PRK09550 mtnK methylthioribose kinase; Reviewed
Probab=83.69  E-value=2  Score=36.30  Aligned_cols=29  Identities=21%  Similarity=0.428  Sum_probs=24.8

Q ss_pred             ceEecCCCCCceEECCCCCceEeeecceee
Q 041793           33 RIIHRDLKASNVLLDQDMNPKISDFGLARA   62 (224)
Q Consensus        33 ~i~H~dl~~~nil~~~~~~~kl~df~~~~~   62 (224)
                      .++|||+.+.||++..+ .+++.|+.++..
T Consensus       224 ~l~HgDl~~gni~~~~~-~~~viD~E~a~~  252 (401)
T PRK09550        224 ALLHGDLHTGSIFVTEE-ETKVIDPEFAFY  252 (401)
T ss_pred             ceeeccCCcccEEeeCC-CcEEEecccccc
Confidence            39999999999999766 589999987754


No 492
>PF02958 EcKinase:  Ecdysteroid kinase;  InterPro: IPR004119 This family includes proteins of unknown function. All known members of this group are proteins from drosophila and Caenorhabditis elegans.
Probab=83.37  E-value=0.72  Score=36.99  Aligned_cols=30  Identities=33%  Similarity=0.463  Sum_probs=24.3

Q ss_pred             ceEecCCCCCceEECCC--C---CceEeeecceee
Q 041793           33 RIIHRDLKASNVLLDQD--M---NPKISDFGLARA   62 (224)
Q Consensus        33 ~i~H~dl~~~nil~~~~--~---~~kl~df~~~~~   62 (224)
                      .++|||+...|+++..+  |   .+++.||..++.
T Consensus       216 vl~HGD~w~nNilf~~~~~g~~~~~~liDfQ~~~~  250 (294)
T PF02958_consen  216 VLCHGDFWTNNILFKYDDDGKPIDVVLIDFQLARY  250 (294)
T ss_pred             EEEcCccCHHhEeEccccccccccceeeccccccC
Confidence            49999999999999654  3   578999987653


No 493
>KOG1093 consensus Predicted protein kinase (contains TBC and RHOD domains) [General function prediction only]
Probab=82.77  E-value=0.15  Score=44.15  Aligned_cols=81  Identities=20%  Similarity=0.273  Sum_probs=41.7

Q ss_pred             cccceEehhHHHHHHHhcccCCCCcCCCcccccccccC-CCccccCccccCCcCHHHHHHHHHHHHHhccCCCCCCCChH
Q 041793           94 VKSDVFSFGILLLEIISGKKNRGFYHSDNKLNLIGHVS-MPSQLIDPCIQGSFNLVEVIRCIHIGLLCVQQHPKDRPSMP  172 (224)
Q Consensus        94 ~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dp~~Rps~~  172 (224)
                      +|+|||++|.++.++.-|..-+......+....+.... ..............-.+-..+.+++.+.|+-..|..||...
T Consensus       110 pKsdVwsl~~i~~el~L~~~l~~~~~~s~~l~~i~k~~~~d~~~~~~a~e~~~~~~~d~~~~~~~~~c~~~~~~ir~l~~  189 (725)
T KOG1093|consen  110 PKSDVWSLGFIILELYLGISLEAELTESEYLEILLKYYTDDQELLSTAMEHLIQLLADKKRLPLLKKCLWLEPIIRPLPM  189 (725)
T ss_pred             cchhhhhHHHHHHHHHHhhHHHHHHHHHHHHHHHHHhccCchhHHHHHHHHHHHHhhhHhHHHHhccCCccccccccchh
Confidence            69999999999999988765433222111111111111 11110000000011111234567788899999998887544


Q ss_pred             HH
Q 041793          173 SV  174 (224)
Q Consensus       173 ~v  174 (224)
                      +.
T Consensus       190 ~~  191 (725)
T KOG1093|consen  190 EL  191 (725)
T ss_pred             HH
Confidence            43


No 494
>PRK11768 serine/threonine protein kinase; Provisional
Probab=82.00  E-value=2.3  Score=34.84  Aligned_cols=26  Identities=35%  Similarity=0.552  Sum_probs=22.4

Q ss_pred             eEecCCCCCceEECCCCCceEeeeccee
Q 041793           34 IIHRDLKASNVLLDQDMNPKISDFGLAR   61 (224)
Q Consensus        34 i~H~dl~~~nil~~~~~~~kl~df~~~~   61 (224)
                      ++|+|+.+.||+++ + .+.+.||+-+.
T Consensus       198 liHgD~h~~NvL~~-d-~~~iIDFDd~~  223 (325)
T PRK11768        198 RLHGDCHPGNILWR-D-GPHFVDLDDAR  223 (325)
T ss_pred             ceecCCCchhcccc-C-CcEEEeCCCCC
Confidence            89999999999995 3 57899998664


No 495
>PRK06149 hypothetical protein; Provisional
Probab=78.74  E-value=2.9  Score=39.67  Aligned_cols=28  Identities=29%  Similarity=0.423  Sum_probs=23.0

Q ss_pred             eEecCCCCCceEECCCC--C---ceEeeeccee
Q 041793           34 IIHRDLKASNVLLDQDM--N---PKISDFGLAR   61 (224)
Q Consensus        34 i~H~dl~~~nil~~~~~--~---~kl~df~~~~   61 (224)
                      ++|+|+...||+++.+.  .   ..+.|||-+.
T Consensus       210 ~IH~Dl~~~Nilv~~~~~~~~~v~giIDFgD~~  242 (972)
T PRK06149        210 AVHLDITDDNVVGSRDADGRWQPDGVIDFGDLV  242 (972)
T ss_pred             ccCCCCCcccEEEcCCCCCCcceeEEEEcccch
Confidence            99999999999998652  3   3799998765


No 496
>COG4499 Predicted membrane protein [Function unknown]
Probab=78.13  E-value=4.4  Score=33.67  Aligned_cols=55  Identities=15%  Similarity=0.186  Sum_probs=43.4

Q ss_pred             CCChHHHHHHHHHHHHHHhhhhcCCCCceEecCCCCCceEECCCCCceEeeecceeecC
Q 041793            6 ILDWPKRFHIICGTARGVMYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFG   64 (224)
Q Consensus         6 ~l~~~~~~~i~~qi~~~l~~Lh~~~~~~i~H~dl~~~nil~~~~~~~kl~df~~~~~~~   64 (224)
                      .+.....++++.+.+..|..+...    -.|-=+.|+||+++.++.+.+..+|+-....
T Consensus        81 ~~~k~~Klr~a~~~I~~l~e~~~t----r~~~~laPeNilf~~~l~p~~vH~Glk~~lp  135 (434)
T COG4499          81 RKEKTRKLRLALQNIATLSELNNT----RYTFFLAPENILFDGGLTPFFVHRGLKNSLP  135 (434)
T ss_pred             HHHHHHHHHHHHHHHHHHHHhhcc----ceeEEecchheEEcCCCceEEEecchhccCC
Confidence            345567888888888888876554    4677788999999999999999999876543


No 497
>PRK10593 hypothetical protein; Provisional
Probab=75.07  E-value=8.7  Score=31.03  Aligned_cols=27  Identities=15%  Similarity=0.240  Sum_probs=21.0

Q ss_pred             CceEecCCCCCceEECCC-CC-ceEeeec
Q 041793           32 LRIIHRDLKASNVLLDQD-MN-PKISDFG   58 (224)
Q Consensus        32 ~~i~H~dl~~~nil~~~~-~~-~kl~df~   58 (224)
                      +.++|||+.+.|++++.. +. +.+.|..
T Consensus       193 psLlHGDlw~gNvl~~~~~~~i~~liDPa  221 (297)
T PRK10593        193 CVLVHGNFTLRSMLKDPRSDQLLAMLNPG  221 (297)
T ss_pred             CeeEeCCCCcccEEECCCCCceEEEECch
Confidence            469999999999999865 33 5666654


No 498
>PF10707 YrbL-PhoP_reg:  PhoP regulatory network protein YrbL;  InterPro: IPR019647  This entry represents proteins that are activated by the protein PhoP. PhoP controls the expression of a large number of genes that mediate adaptation to low Mg2+ environments and/or virulence in several bacterial species. YbrL is proposed to be acting in a loop activity with PhoP and PrmA analogous to the multi-component loop in Salmonella sp., where the PhoP-dependent PmrD protein activates the regulatory protein PmrA, and the activated PmrA then represses transcription from the PmrD promoter which harbours binding sites for both the PhoP and PmrA proteins. Expression of YrbL is induced in low Mg2+ in a PhoP-dependent fashion and repressed by Fe3+ in a PmrA-dependent manner []. 
Probab=74.89  E-value=5.4  Score=30.26  Aligned_cols=35  Identities=23%  Similarity=0.306  Sum_probs=25.1

Q ss_pred             HHHHHhhhhcCCCCceEecCCCCCceEECCCC----CceEee
Q 041793           19 TARGVMYLHQDSRLRIIHRDLKASNVLLDQDM----NPKISD   56 (224)
Q Consensus        19 i~~~l~~Lh~~~~~~i~H~dl~~~nil~~~~~----~~kl~d   56 (224)
                      +-+-..||-+.+   |+.+|++|.||++....    .+.+.|
T Consensus       127 L~~f~~~l~~~~---Iv~~dl~~~NIv~~~~~~~~~~lvlID  165 (199)
T PF10707_consen  127 LDEFKRYLLDHH---IVIRDLNPHNIVVQRRDSGEFRLVLID  165 (199)
T ss_pred             HHHHHHHHHHcC---CeecCCCcccEEEEecCCCceEEEEEe
Confidence            334466777877   99999999999996432    355555


No 499
>TIGR01767 MTRK 5-methylthioribose kinase. This enzyme is involved in the methionine salvage pathway in certain bacteria.
Probab=73.43  E-value=3.1  Score=34.67  Aligned_cols=29  Identities=21%  Similarity=0.384  Sum_probs=23.8

Q ss_pred             ceEecCCCCCceEECCCCCceEeeecceee
Q 041793           33 RIIHRDLKASNVLLDQDMNPKISDFGLARA   62 (224)
Q Consensus        33 ~i~H~dl~~~nil~~~~~~~kl~df~~~~~   62 (224)
                      .++|||+.+.||++...+ .++.|+.++..
T Consensus       193 ~llHGDl~~gNi~~~~~~-~~~iD~e~~~~  221 (370)
T TIGR01767       193 TLLHGDLHSGSIFVSEHE-TKVIDPEFAFY  221 (370)
T ss_pred             eeeeccCCcccEEEcCCC-CEEEcCccccc
Confidence            399999999999997654 77999876654


No 500
>PLN02756 S-methyl-5-thioribose kinase
Probab=71.49  E-value=6.7  Score=33.36  Aligned_cols=29  Identities=24%  Similarity=0.406  Sum_probs=23.7

Q ss_pred             CceEecCCCCCceEECCCCCceEeeeccee
Q 041793           32 LRIIHRDLKASNVLLDQDMNPKISDFGLAR   61 (224)
Q Consensus        32 ~~i~H~dl~~~nil~~~~~~~kl~df~~~~   61 (224)
                      ..++|||+.+-||++..++ .++.|..++.
T Consensus       230 ~~L~HGDl~~g~i~~~~~~-~~~id~ef~~  258 (418)
T PLN02756        230 QALVHGDLHTGSVMVTPDS-TQVIDPEFAF  258 (418)
T ss_pred             cceeecCCCCCcEEEcCCC-ceEecchhhc
Confidence            3599999999999998775 7888876554


Done!